###################################
5236 groups of orthologs
5726 in-paralogs from C.intestinalis
7681 in-paralogs from S.scrofa
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 5553 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 S.scrofa:3498

F6PHB9              	100.00%		F1RVR2              	100.00%
Bootstrap support for F6PHB9 as seed ortholog is 45%.
Alternative seed ortholog is H2XPC8 (11 bits away from this cluster)
Bootstrap support for F1RVR2 as seed ortholog is 100%.

Group of orthologs #2. Best score 5295 bits
Score difference with first non-orthologous sequence - C.intestinalis:1257 S.scrofa:3180

F6ZZ40              	100.00%		F1SC07              	100.00%
F7AU91              	5.62%		
Bootstrap support for F6ZZ40 as seed ortholog is 100%.
Bootstrap support for F1SC07 as seed ortholog is 100%.

Group of orthologs #3. Best score 4758 bits
Score difference with first non-orthologous sequence - C.intestinalis:4758 S.scrofa:4758

H2XSF3              	100.00%		P16960              	100.00%
                    	       		F1RI43              	75.02%
                    	       		F1RHM3              	23.63%
Bootstrap support for H2XSF3 as seed ortholog is 100%.
Bootstrap support for P16960 as seed ortholog is 100%.

Group of orthologs #4. Best score 3433 bits
Score difference with first non-orthologous sequence - C.intestinalis:3433 S.scrofa:3433

F6XN27              	100.00%		I3L770              	100.00%
Bootstrap support for F6XN27 as seed ortholog is 100%.
Bootstrap support for I3L770 as seed ortholog is 100%.

Group of orthologs #5. Best score 3062 bits
Score difference with first non-orthologous sequence - C.intestinalis:3062 S.scrofa:2053

F6XWC8              	100.00%		F1RYS0              	100.00%
Bootstrap support for F6XWC8 as seed ortholog is 100%.
Bootstrap support for F1RYS0 as seed ortholog is 100%.

Group of orthologs #6. Best score 2840 bits
Score difference with first non-orthologous sequence - C.intestinalis:2840 S.scrofa:2840

F6WN97              	100.00%		F1SMN5              	100.00%
Bootstrap support for F6WN97 as seed ortholog is 100%.
Bootstrap support for F1SMN5 as seed ortholog is 100%.

Group of orthologs #7. Best score 2840 bits
Score difference with first non-orthologous sequence - C.intestinalis:2840 S.scrofa:2840

F6RL41              	100.00%		I3LTJ6              	100.00%
Bootstrap support for F6RL41 as seed ortholog is 100%.
Bootstrap support for I3LTJ6 as seed ortholog is 100%.

Group of orthologs #8. Best score 2756 bits
Score difference with first non-orthologous sequence - C.intestinalis:2756 S.scrofa:2756

F6WWV8              	100.00%		F1SFZ8              	100.00%
Bootstrap support for F6WWV8 as seed ortholog is 100%.
Bootstrap support for F1SFZ8 as seed ortholog is 100%.

Group of orthologs #9. Best score 2754 bits
Score difference with first non-orthologous sequence - C.intestinalis:2754 S.scrofa:2754

F6T0F1              	100.00%		F1RGB5              	100.00%
                    	       		F1S1B5              	17.13%
Bootstrap support for F6T0F1 as seed ortholog is 100%.
Bootstrap support for F1RGB5 as seed ortholog is 100%.

Group of orthologs #10. Best score 2712 bits
Score difference with first non-orthologous sequence - C.intestinalis:2712 S.scrofa:2712

F7BBD1              	100.00%		F1RFU3              	100.00%
Bootstrap support for F7BBD1 as seed ortholog is 100%.
Bootstrap support for F1RFU3 as seed ortholog is 100%.

Group of orthologs #11. Best score 2687 bits
Score difference with first non-orthologous sequence - C.intestinalis:1594 S.scrofa:2087

F6WEY7              	100.00%		Q9TV36              	100.00%
                    	       		I3LJJ0              	27.87%
Bootstrap support for F6WEY7 as seed ortholog is 100%.
Bootstrap support for Q9TV36 as seed ortholog is 100%.

Group of orthologs #12. Best score 2653 bits
Score difference with first non-orthologous sequence - C.intestinalis:461 S.scrofa:223

H2Y265              	100.00%		P79293              	100.00%
H2XWY7              	96.83%		Q9TV61              	46.48%
                    	       		Q9TV62              	45.84%
                    	       		F1SS64              	44.38%
                    	       		Q9TV63              	44.29%
                    	       		F1SS61              	34.52%
                    	       		F1SS66              	26.12%
Bootstrap support for H2Y265 as seed ortholog is 100%.
Bootstrap support for P79293 as seed ortholog is 99%.

Group of orthologs #13. Best score 2544 bits
Score difference with first non-orthologous sequence - C.intestinalis:2544 S.scrofa:2544

F6UG85              	100.00%		I3LSJ5              	100.00%
                    	       		F1SDY7              	37.14%
Bootstrap support for F6UG85 as seed ortholog is 100%.
Bootstrap support for I3LSJ5 as seed ortholog is 100%.

Group of orthologs #14. Best score 2415 bits
Score difference with first non-orthologous sequence - C.intestinalis:2415 S.scrofa:1544

F6R5F9              	100.00%		F1S1H9              	100.00%
Bootstrap support for F6R5F9 as seed ortholog is 100%.
Bootstrap support for F1S1H9 as seed ortholog is 100%.

Group of orthologs #15. Best score 2322 bits
Score difference with first non-orthologous sequence - C.intestinalis:1044 S.scrofa:1000

H2XZY7              	100.00%		F1SSA6              	100.00%
                    	       		F1SKJ1              	26.08%
                    	       		I3L5B3              	19.07%
Bootstrap support for H2XZY7 as seed ortholog is 100%.
Bootstrap support for F1SSA6 as seed ortholog is 100%.

Group of orthologs #16. Best score 2150 bits
Score difference with first non-orthologous sequence - C.intestinalis:2150 S.scrofa:1394

F6R8M3              	100.00%		F1SER9              	100.00%
                    	       		F1STP0              	32.72%
                    	       		F1RQB2              	18.21%
Bootstrap support for F6R8M3 as seed ortholog is 100%.
Bootstrap support for F1SER9 as seed ortholog is 100%.

Group of orthologs #17. Best score 2114 bits
Score difference with first non-orthologous sequence - C.intestinalis:2114 S.scrofa:1565

F6QR00              	100.00%		I3LGP4              	100.00%
Bootstrap support for F6QR00 as seed ortholog is 100%.
Bootstrap support for I3LGP4 as seed ortholog is 100%.

Group of orthologs #18. Best score 2074 bits
Score difference with first non-orthologous sequence - C.intestinalis:2074 S.scrofa:1690

H2XKE2              	100.00%		F1SHF6              	100.00%
Bootstrap support for H2XKE2 as seed ortholog is 100%.
Bootstrap support for F1SHF6 as seed ortholog is 100%.

Group of orthologs #19. Best score 2041 bits
Score difference with first non-orthologous sequence - C.intestinalis:2041 S.scrofa:1146

F6Q5V5              	100.00%		F1SA60              	100.00%
Bootstrap support for F6Q5V5 as seed ortholog is 100%.
Bootstrap support for F1SA60 as seed ortholog is 100%.

Group of orthologs #20. Best score 2037 bits
Score difference with first non-orthologous sequence - C.intestinalis:2037 S.scrofa:1891

H2XRN5              	100.00%		F1RR78              	100.00%
Bootstrap support for H2XRN5 as seed ortholog is 100%.
Bootstrap support for F1RR78 as seed ortholog is 100%.

Group of orthologs #21. Best score 2013 bits
Score difference with first non-orthologous sequence - C.intestinalis:2013 S.scrofa:2013

F6ZIS0              	100.00%		F1S0Y1              	100.00%
Bootstrap support for F6ZIS0 as seed ortholog is 100%.
Bootstrap support for F1S0Y1 as seed ortholog is 100%.

Group of orthologs #22. Best score 1908 bits
Score difference with first non-orthologous sequence - C.intestinalis:1908 S.scrofa:1908

H2Y0W9              	100.00%		F1S4P1              	100.00%
                    	       		F1SHF7              	20.55%
Bootstrap support for H2Y0W9 as seed ortholog is 100%.
Bootstrap support for F1S4P1 as seed ortholog is 100%.

Group of orthologs #23. Best score 1900 bits
Score difference with first non-orthologous sequence - C.intestinalis:1900 S.scrofa:1900

F6W1H2              	100.00%		F1RJX8              	100.00%
Bootstrap support for F6W1H2 as seed ortholog is 100%.
Bootstrap support for F1RJX8 as seed ortholog is 100%.

Group of orthologs #24. Best score 1896 bits
Score difference with first non-orthologous sequence - C.intestinalis:1896 S.scrofa:1770

F6UE33              	100.00%		K7GSM4              	100.00%
                    	       		F1SBE8              	43.13%
Bootstrap support for F6UE33 as seed ortholog is 100%.
Bootstrap support for K7GSM4 as seed ortholog is 100%.

Group of orthologs #25. Best score 1884 bits
Score difference with first non-orthologous sequence - C.intestinalis:1353 S.scrofa:1528

F6X5E1              	100.00%		I3LIY3              	100.00%
Bootstrap support for F6X5E1 as seed ortholog is 100%.
Bootstrap support for I3LIY3 as seed ortholog is 100%.

Group of orthologs #26. Best score 1867 bits
Score difference with first non-orthologous sequence - C.intestinalis:1867 S.scrofa:1867

F6YKH7              	100.00%		F1RZR0              	100.00%
Bootstrap support for F6YKH7 as seed ortholog is 100%.
Bootstrap support for F1RZR0 as seed ortholog is 100%.

Group of orthologs #27. Best score 1859 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 S.scrofa:906

F6QCF9              	100.00%		F1RPN2              	100.00%
                    	       		F1S1Y9              	72.04%
                    	       		F1SGK6              	50.89%
                    	       		F1S1Y7              	35.95%
                    	       		F1RSK2              	29.93%
                    	       		F1SJS9              	26.28%
Bootstrap support for F6QCF9 as seed ortholog is 100%.
Bootstrap support for F1RPN2 as seed ortholog is 100%.

Group of orthologs #28. Best score 1851 bits
Score difference with first non-orthologous sequence - C.intestinalis:1038 S.scrofa:803

F6Z448              	100.00%		F1S021              	100.00%
                    	       		F1S571              	37.18%
                    	       		K7GST7              	20.80%
                    	       		F1S3G7              	9.97%
Bootstrap support for F6Z448 as seed ortholog is 100%.
Bootstrap support for F1S021 as seed ortholog is 100%.

Group of orthologs #29. Best score 1850 bits
Score difference with first non-orthologous sequence - C.intestinalis:1324 S.scrofa:1519

F6Q8W5              	100.00%		F1S675              	100.00%
                    	       		F1SD80              	8.91%
Bootstrap support for F6Q8W5 as seed ortholog is 100%.
Bootstrap support for F1S675 as seed ortholog is 100%.

Group of orthologs #30. Best score 1825 bits
Score difference with first non-orthologous sequence - C.intestinalis:1483 S.scrofa:620

F7AZ47              	100.00%		F1SB08              	100.00%
Bootstrap support for F7AZ47 as seed ortholog is 100%.
Bootstrap support for F1SB08 as seed ortholog is 100%.

Group of orthologs #31. Best score 1759 bits
Score difference with first non-orthologous sequence - C.intestinalis:1759 S.scrofa:1759

H2Y1G0              	100.00%		F1RHM1              	100.00%
Bootstrap support for H2Y1G0 as seed ortholog is 100%.
Bootstrap support for F1RHM1 as seed ortholog is 100%.

Group of orthologs #32. Best score 1739 bits
Score difference with first non-orthologous sequence - C.intestinalis:1180 S.scrofa:1220

F6YKR9              	100.00%		F1S1H3              	100.00%
Bootstrap support for F6YKR9 as seed ortholog is 100%.
Bootstrap support for F1S1H3 as seed ortholog is 100%.

Group of orthologs #33. Best score 1719 bits
Score difference with first non-orthologous sequence - C.intestinalis:1719 S.scrofa:1719

F7BIX8              	100.00%		I3LTY2              	100.00%
                    	       		F1SNP7              	20.01%
                    	       		F1RU77              	14.75%
Bootstrap support for F7BIX8 as seed ortholog is 100%.
Bootstrap support for I3LTY2 as seed ortholog is 100%.

Group of orthologs #34. Best score 1691 bits
Score difference with first non-orthologous sequence - C.intestinalis:1691 S.scrofa:1691

F7AKG2              	100.00%		O46374              	100.00%
                    	       		F1RS45              	29.59%
Bootstrap support for F7AKG2 as seed ortholog is 100%.
Bootstrap support for O46374 as seed ortholog is 100%.

Group of orthologs #35. Best score 1633 bits
Score difference with first non-orthologous sequence - C.intestinalis:1633 S.scrofa:1633

F6PXA1              	100.00%		Q27HV0              	100.00%
Bootstrap support for F6PXA1 as seed ortholog is 100%.
Bootstrap support for Q27HV0 as seed ortholog is 100%.

Group of orthologs #36. Best score 1629 bits
Score difference with first non-orthologous sequence - C.intestinalis:1629 S.scrofa:1629

F6SSI2              	100.00%		F1SIH2              	100.00%
                    	       		F1RZD8              	23.35%
Bootstrap support for F6SSI2 as seed ortholog is 100%.
Bootstrap support for F1SIH2 as seed ortholog is 100%.

Group of orthologs #37. Best score 1623 bits
Score difference with first non-orthologous sequence - C.intestinalis:1623 S.scrofa:885

F6SUC2              	100.00%		I3LJR4              	100.00%
Bootstrap support for F6SUC2 as seed ortholog is 100%.
Bootstrap support for I3LJR4 as seed ortholog is 100%.

Group of orthologs #38. Best score 1614 bits
Score difference with first non-orthologous sequence - C.intestinalis:1085 S.scrofa:1279

F6SKF5              	100.00%		F1RTA0              	100.00%
                    	       		F1SR99              	8.11%
Bootstrap support for F6SKF5 as seed ortholog is 100%.
Bootstrap support for F1RTA0 as seed ortholog is 100%.

Group of orthologs #39. Best score 1612 bits
Score difference with first non-orthologous sequence - C.intestinalis:1612 S.scrofa:1612

H2XJT1              	100.00%		I3LLS7              	100.00%
Bootstrap support for H2XJT1 as seed ortholog is 100%.
Bootstrap support for I3LLS7 as seed ortholog is 100%.

Group of orthologs #40. Best score 1590 bits
Score difference with first non-orthologous sequence - C.intestinalis:1590 S.scrofa:1590

F6TSV2              	100.00%		F1S8S9              	100.00%
Bootstrap support for F6TSV2 as seed ortholog is 100%.
Bootstrap support for F1S8S9 as seed ortholog is 100%.

Group of orthologs #41. Best score 1570 bits
Score difference with first non-orthologous sequence - C.intestinalis:969 S.scrofa:1031

F6PWI5              	100.00%		F1SAE9              	100.00%
                    	       		F1SPT5              	12.79%
Bootstrap support for F6PWI5 as seed ortholog is 100%.
Bootstrap support for F1SAE9 as seed ortholog is 100%.

Group of orthologs #42. Best score 1567 bits
Score difference with first non-orthologous sequence - C.intestinalis:1567 S.scrofa:1567

F6WXT4              	100.00%		F1RQZ9              	100.00%
Bootstrap support for F6WXT4 as seed ortholog is 100%.
Bootstrap support for F1RQZ9 as seed ortholog is 100%.

Group of orthologs #43. Best score 1558 bits
Score difference with first non-orthologous sequence - C.intestinalis:1222 S.scrofa:303

H2XY07              	100.00%		F1RGF9              	100.00%
                    	       		D2WKD8              	50.32%
                    	       		P05024              	46.48%
                    	       		I3L8L8              	7.68%
Bootstrap support for H2XY07 as seed ortholog is 100%.
Bootstrap support for F1RGF9 as seed ortholog is 100%.

Group of orthologs #44. Best score 1545 bits
Score difference with first non-orthologous sequence - C.intestinalis:1545 S.scrofa:1545

F6YD90              	100.00%		F1RM15              	100.00%
Bootstrap support for F6YD90 as seed ortholog is 100%.
Bootstrap support for F1RM15 as seed ortholog is 100%.

Group of orthologs #45. Best score 1537 bits
Score difference with first non-orthologous sequence - C.intestinalis:1537 S.scrofa:961

F6RW91              	100.00%		F1SA77              	100.00%
                    	       		I3LIS2              	20.01%
Bootstrap support for F6RW91 as seed ortholog is 100%.
Bootstrap support for F1SA77 as seed ortholog is 100%.

Group of orthologs #46. Best score 1525 bits
Score difference with first non-orthologous sequence - C.intestinalis:1525 S.scrofa:699

F6QI54              	100.00%		O18866              	100.00%
Bootstrap support for F6QI54 as seed ortholog is 100%.
Bootstrap support for O18866 as seed ortholog is 100%.

Group of orthologs #47. Best score 1524 bits
Score difference with first non-orthologous sequence - C.intestinalis:1524 S.scrofa:1524

F6WLW9              	100.00%		I3LLZ8              	100.00%
Bootstrap support for F6WLW9 as seed ortholog is 100%.
Bootstrap support for I3LLZ8 as seed ortholog is 100%.

Group of orthologs #48. Best score 1521 bits
Score difference with first non-orthologous sequence - C.intestinalis:1521 S.scrofa:1521

F6QH36              	100.00%		F1RKY3              	100.00%
Bootstrap support for F6QH36 as seed ortholog is 100%.
Bootstrap support for F1RKY3 as seed ortholog is 100%.

Group of orthologs #49. Best score 1519 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:1135

F6X211              	100.00%		F1RFH9              	100.00%
H2XSH4              	90.32%		P11607              	37.14%
H2XNA4              	87.10%		
Bootstrap support for F6X211 as seed ortholog is 100%.
Bootstrap support for F1RFH9 as seed ortholog is 100%.

Group of orthologs #50. Best score 1519 bits
Score difference with first non-orthologous sequence - C.intestinalis:1519 S.scrofa:1519

F7AMF6              	100.00%		F6PV15              	100.00%
Bootstrap support for F7AMF6 as seed ortholog is 100%.
Bootstrap support for F6PV15 as seed ortholog is 100%.

Group of orthologs #51. Best score 1510 bits
Score difference with first non-orthologous sequence - C.intestinalis:1510 S.scrofa:1510

F6PRC5              	100.00%		F1RZA6              	100.00%
Bootstrap support for F6PRC5 as seed ortholog is 100%.
Bootstrap support for F1RZA6 as seed ortholog is 100%.

Group of orthologs #52. Best score 1510 bits
Score difference with first non-orthologous sequence - C.intestinalis:1510 S.scrofa:1510

H2XU88              	100.00%		I3LDN4              	100.00%
Bootstrap support for H2XU88 as seed ortholog is 100%.
Bootstrap support for I3LDN4 as seed ortholog is 100%.

Group of orthologs #53. Best score 1497 bits
Score difference with first non-orthologous sequence - C.intestinalis:797 S.scrofa:647

F6VJG0              	100.00%		F1RLM1              	100.00%
Bootstrap support for F6VJG0 as seed ortholog is 100%.
Bootstrap support for F1RLM1 as seed ortholog is 100%.

Group of orthologs #54. Best score 1497 bits
Score difference with first non-orthologous sequence - C.intestinalis:1497 S.scrofa:613

F7B9A9              	100.00%		F1SLX7              	100.00%
Bootstrap support for F7B9A9 as seed ortholog is 100%.
Bootstrap support for F1SLX7 as seed ortholog is 100%.

Group of orthologs #55. Best score 1493 bits
Score difference with first non-orthologous sequence - C.intestinalis:1493 S.scrofa:1493

F6TIR0              	100.00%		Q28943              	100.00%
Bootstrap support for F6TIR0 as seed ortholog is 100%.
Bootstrap support for Q28943 as seed ortholog is 100%.

Group of orthologs #56. Best score 1488 bits
Score difference with first non-orthologous sequence - C.intestinalis:1488 S.scrofa:1063

Q4H2Q8              	100.00%		F1RRG9              	100.00%
                    	       		F1RTI9              	38.52%
Bootstrap support for Q4H2Q8 as seed ortholog is 100%.
Bootstrap support for F1RRG9 as seed ortholog is 100%.

Group of orthologs #57. Best score 1465 bits
Score difference with first non-orthologous sequence - C.intestinalis:1465 S.scrofa:1465

F6URP5              	100.00%		F1SKK7              	100.00%
Bootstrap support for F6URP5 as seed ortholog is 100%.
Bootstrap support for F1SKK7 as seed ortholog is 100%.

Group of orthologs #58. Best score 1429 bits
Score difference with first non-orthologous sequence - C.intestinalis:1429 S.scrofa:561

F6VJH0              	100.00%		F1SRR8              	100.00%
Bootstrap support for F6VJH0 as seed ortholog is 100%.
Bootstrap support for F1SRR8 as seed ortholog is 100%.

Group of orthologs #59. Best score 1428 bits
Score difference with first non-orthologous sequence - C.intestinalis:1220 S.scrofa:1428

F7ANR5              	100.00%		F1RIE2              	100.00%
Bootstrap support for F7ANR5 as seed ortholog is 100%.
Bootstrap support for F1RIE2 as seed ortholog is 100%.

Group of orthologs #60. Best score 1420 bits
Score difference with first non-orthologous sequence - C.intestinalis:1420 S.scrofa:316

F6ZAQ4              	100.00%		F1S663              	100.00%
Bootstrap support for F6ZAQ4 as seed ortholog is 100%.
Bootstrap support for F1S663 as seed ortholog is 99%.

Group of orthologs #61. Best score 1414 bits
Score difference with first non-orthologous sequence - C.intestinalis:1414 S.scrofa:1414

F6XUV4              	100.00%		F1S3I5              	100.00%
Bootstrap support for F6XUV4 as seed ortholog is 100%.
Bootstrap support for F1S3I5 as seed ortholog is 100%.

Group of orthologs #62. Best score 1412 bits
Score difference with first non-orthologous sequence - C.intestinalis:1412 S.scrofa:488

H2XWC3              	100.00%		F1SC82              	100.00%
F6X313              	16.61%		F1SLE7              	25.66%
Bootstrap support for H2XWC3 as seed ortholog is 100%.
Bootstrap support for F1SC82 as seed ortholog is 100%.

Group of orthologs #63. Best score 1412 bits
Score difference with first non-orthologous sequence - C.intestinalis:1412 S.scrofa:1412

F7BKT8              	100.00%		F1SL54              	100.00%
Bootstrap support for F7BKT8 as seed ortholog is 100%.
Bootstrap support for F1SL54 as seed ortholog is 100%.

Group of orthologs #64. Best score 1394 bits
Score difference with first non-orthologous sequence - C.intestinalis:1241 S.scrofa:835

F6TIZ3              	100.00%		F1S057              	100.00%
                    	       		F1SA47              	25.26%
Bootstrap support for F6TIZ3 as seed ortholog is 100%.
Bootstrap support for F1S057 as seed ortholog is 100%.

Group of orthologs #65. Best score 1387 bits
Score difference with first non-orthologous sequence - C.intestinalis:1387 S.scrofa:1387

F6XL66              	100.00%		F1RHG1              	100.00%
Bootstrap support for F6XL66 as seed ortholog is 100%.
Bootstrap support for F1RHG1 as seed ortholog is 100%.

Group of orthologs #66. Best score 1386 bits
Score difference with first non-orthologous sequence - C.intestinalis:1386 S.scrofa:1386

F6PKD1              	100.00%		F1S6V3              	100.00%
Bootstrap support for F6PKD1 as seed ortholog is 100%.
Bootstrap support for F1S6V3 as seed ortholog is 100%.

Group of orthologs #67. Best score 1386 bits
Score difference with first non-orthologous sequence - C.intestinalis:1386 S.scrofa:1386

F6Z5U4              	100.00%		F1SLL6              	100.00%
Bootstrap support for F6Z5U4 as seed ortholog is 100%.
Bootstrap support for F1SLL6 as seed ortholog is 100%.

Group of orthologs #68. Best score 1378 bits
Score difference with first non-orthologous sequence - C.intestinalis:1378 S.scrofa:1378

H2XJF1              	100.00%		F1SMZ9              	100.00%
Bootstrap support for H2XJF1 as seed ortholog is 100%.
Bootstrap support for F1SMZ9 as seed ortholog is 100%.

Group of orthologs #69. Best score 1375 bits
Score difference with first non-orthologous sequence - C.intestinalis:1375 S.scrofa:1375

F6TS15              	100.00%		F1SU41              	100.00%
Bootstrap support for F6TS15 as seed ortholog is 100%.
Bootstrap support for F1SU41 as seed ortholog is 100%.

Group of orthologs #70. Best score 1373 bits
Score difference with first non-orthologous sequence - C.intestinalis:1373 S.scrofa:1105

F6YII9              	100.00%		I3LGE9              	100.00%
                    	       		F1SMP3              	17.41%
Bootstrap support for F6YII9 as seed ortholog is 100%.
Bootstrap support for I3LGE9 as seed ortholog is 100%.

Group of orthologs #71. Best score 1371 bits
Score difference with first non-orthologous sequence - C.intestinalis:1371 S.scrofa:1371

F6Z3T2              	100.00%		F2Z5R6              	100.00%
                    	       		F1RYI3              	93.11%
                    	       		I3LU76              	14.27%
Bootstrap support for F6Z3T2 as seed ortholog is 100%.
Bootstrap support for F2Z5R6 as seed ortholog is 100%.

Group of orthologs #72. Best score 1367 bits
Score difference with first non-orthologous sequence - C.intestinalis:1122 S.scrofa:117

F6PGX9              	100.00%		F1RTA1              	100.00%
                    	       		F1RLT0              	6.93%
Bootstrap support for F6PGX9 as seed ortholog is 100%.
Bootstrap support for F1RTA1 as seed ortholog is 97%.

Group of orthologs #73. Best score 1366 bits
Score difference with first non-orthologous sequence - C.intestinalis:1366 S.scrofa:1366

F6S0L5              	100.00%		F1RQE9              	100.00%
Bootstrap support for F6S0L5 as seed ortholog is 100%.
Bootstrap support for F1RQE9 as seed ortholog is 100%.

Group of orthologs #74. Best score 1362 bits
Score difference with first non-orthologous sequence - C.intestinalis:1362 S.scrofa:1268

F6Z743              	100.00%		D2SW95              	100.00%
Bootstrap support for F6Z743 as seed ortholog is 100%.
Bootstrap support for D2SW95 as seed ortholog is 100%.

Group of orthologs #75. Best score 1357 bits
Score difference with first non-orthologous sequence - C.intestinalis:803 S.scrofa:211

F6W0Y5              	100.00%		F1S3Y7              	100.00%
F6V519              	9.16%		
Bootstrap support for F6W0Y5 as seed ortholog is 100%.
Bootstrap support for F1S3Y7 as seed ortholog is 99%.

Group of orthologs #76. Best score 1351 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 S.scrofa:76

F6WVU8              	100.00%		F1S1W2              	100.00%
Bootstrap support for F6WVU8 as seed ortholog is 99%.
Bootstrap support for F1S1W2 as seed ortholog is 87%.

Group of orthologs #77. Best score 1347 bits
Score difference with first non-orthologous sequence - C.intestinalis:866 S.scrofa:385

F6Z6Y7              	100.00%		F1SG41              	100.00%
Bootstrap support for F6Z6Y7 as seed ortholog is 100%.
Bootstrap support for F1SG41 as seed ortholog is 100%.

Group of orthologs #78. Best score 1344 bits
Score difference with first non-orthologous sequence - C.intestinalis:896 S.scrofa:837

F6VLN4              	100.00%		P03974              	100.00%
                    	       		F1SIH8              	97.28%
Bootstrap support for F6VLN4 as seed ortholog is 100%.
Bootstrap support for P03974 as seed ortholog is 100%.

Group of orthologs #79. Best score 1342 bits
Score difference with first non-orthologous sequence - C.intestinalis:1342 S.scrofa:1064

F6WCR1              	100.00%		F1RH32              	100.00%
Bootstrap support for F6WCR1 as seed ortholog is 100%.
Bootstrap support for F1RH32 as seed ortholog is 100%.

Group of orthologs #80. Best score 1339 bits
Score difference with first non-orthologous sequence - C.intestinalis:1339 S.scrofa:512

F6UKS5              	100.00%		F1RJU3              	100.00%
Bootstrap support for F6UKS5 as seed ortholog is 100%.
Bootstrap support for F1RJU3 as seed ortholog is 100%.

Group of orthologs #81. Best score 1339 bits
Score difference with first non-orthologous sequence - C.intestinalis:1339 S.scrofa:1339

F6VCT2              	100.00%		F1RU72              	100.00%
Bootstrap support for F6VCT2 as seed ortholog is 100%.
Bootstrap support for F1RU72 as seed ortholog is 100%.

Group of orthologs #82. Best score 1335 bits
Score difference with first non-orthologous sequence - C.intestinalis:1335 S.scrofa:1335

F7B7Y1              	100.00%		F1SJE9              	100.00%
Bootstrap support for F7B7Y1 as seed ortholog is 100%.
Bootstrap support for F1SJE9 as seed ortholog is 100%.

Group of orthologs #83. Best score 1322 bits
Score difference with first non-orthologous sequence - C.intestinalis:1322 S.scrofa:547

F6U4V1              	100.00%		F1RWX8              	100.00%
Bootstrap support for F6U4V1 as seed ortholog is 100%.
Bootstrap support for F1RWX8 as seed ortholog is 100%.

Group of orthologs #84. Best score 1322 bits
Score difference with first non-orthologous sequence - C.intestinalis:1322 S.scrofa:1322

F6ZP18              	100.00%		F1SRZ7              	100.00%
Bootstrap support for F6ZP18 as seed ortholog is 100%.
Bootstrap support for F1SRZ7 as seed ortholog is 100%.

Group of orthologs #85. Best score 1319 bits
Score difference with first non-orthologous sequence - C.intestinalis:867 S.scrofa:896

F6UY41              	100.00%		Q29122              	100.00%
Bootstrap support for F6UY41 as seed ortholog is 100%.
Bootstrap support for Q29122 as seed ortholog is 100%.

Group of orthologs #86. Best score 1317 bits
Score difference with first non-orthologous sequence - C.intestinalis:1043 S.scrofa:890

H2XZZ5              	100.00%		A5GFS1              	100.00%
Bootstrap support for H2XZZ5 as seed ortholog is 100%.
Bootstrap support for A5GFS1 as seed ortholog is 100%.

Group of orthologs #87. Best score 1315 bits
Score difference with first non-orthologous sequence - C.intestinalis:1315 S.scrofa:934

F6SUU2              	100.00%		F1SFS3              	100.00%
                    	       		F1SH01              	8.19%
Bootstrap support for F6SUU2 as seed ortholog is 100%.
Bootstrap support for F1SFS3 as seed ortholog is 100%.

Group of orthologs #88. Best score 1315 bits
Score difference with first non-orthologous sequence - C.intestinalis:1315 S.scrofa:1315

H2XNB0              	100.00%		F1RXT5              	100.00%
                    	       		F1S6V1              	9.28%
Bootstrap support for H2XNB0 as seed ortholog is 100%.
Bootstrap support for F1RXT5 as seed ortholog is 100%.

Group of orthologs #89. Best score 1310 bits
Score difference with first non-orthologous sequence - C.intestinalis:1310 S.scrofa:1310

F6YKS6              	100.00%		I3LBR7              	100.00%
                    	       		I3L5Z9              	88.80%
Bootstrap support for F6YKS6 as seed ortholog is 100%.
Bootstrap support for I3LBR7 as seed ortholog is 100%.

Group of orthologs #90. Best score 1306 bits
Score difference with first non-orthologous sequence - C.intestinalis:1306 S.scrofa:1306

H2XVQ2              	100.00%		F1SDJ6              	100.00%
Bootstrap support for H2XVQ2 as seed ortholog is 100%.
Bootstrap support for F1SDJ6 as seed ortholog is 100%.

Group of orthologs #91. Best score 1305 bits
Score difference with first non-orthologous sequence - C.intestinalis:649 S.scrofa:467

F6WTL7              	100.00%		F1RLL9              	100.00%
                    	       		F1RXI3              	11.39%
Bootstrap support for F6WTL7 as seed ortholog is 100%.
Bootstrap support for F1RLL9 as seed ortholog is 100%.

Group of orthologs #92. Best score 1300 bits
Score difference with first non-orthologous sequence - C.intestinalis:1300 S.scrofa:221

F6PV45              	100.00%		F1RQQ8              	100.00%
                    	       		F1SFF8              	27.70%
Bootstrap support for F6PV45 as seed ortholog is 100%.
Bootstrap support for F1RQQ8 as seed ortholog is 100%.

Group of orthologs #93. Best score 1298 bits
Score difference with first non-orthologous sequence - C.intestinalis:1298 S.scrofa:1298

F6U8H5              	100.00%		F1RG13              	100.00%
Bootstrap support for F6U8H5 as seed ortholog is 100%.
Bootstrap support for F1RG13 as seed ortholog is 100%.

Group of orthologs #94. Best score 1295 bits
Score difference with first non-orthologous sequence - C.intestinalis:1295 S.scrofa:1295

F6VBD5              	100.00%		F1SB67              	100.00%
Bootstrap support for F6VBD5 as seed ortholog is 100%.
Bootstrap support for F1SB67 as seed ortholog is 100%.

Group of orthologs #95. Best score 1292 bits
Score difference with first non-orthologous sequence - C.intestinalis:1292 S.scrofa:1191

F6YGU8              	100.00%		P56941              	100.00%
Bootstrap support for F6YGU8 as seed ortholog is 100%.
Bootstrap support for P56941 as seed ortholog is 100%.

Group of orthologs #96. Best score 1287 bits
Score difference with first non-orthologous sequence - C.intestinalis:1287 S.scrofa:403

H2XPG3              	100.00%		F1SI76              	100.00%
Bootstrap support for H2XPG3 as seed ortholog is 100%.
Bootstrap support for F1SI76 as seed ortholog is 100%.

Group of orthologs #97. Best score 1286 bits
Score difference with first non-orthologous sequence - C.intestinalis:1286 S.scrofa:390

F6USW1              	100.00%		F1RFA0              	100.00%
                    	       		F1RPD0              	14.26%
                    	       		F1RPC9              	9.55%
Bootstrap support for F6USW1 as seed ortholog is 100%.
Bootstrap support for F1RFA0 as seed ortholog is 99%.

Group of orthologs #98. Best score 1282 bits
Score difference with first non-orthologous sequence - C.intestinalis:1282 S.scrofa:726

F7BBP3              	100.00%		F1S9U5              	100.00%
Bootstrap support for F7BBP3 as seed ortholog is 100%.
Bootstrap support for F1S9U5 as seed ortholog is 100%.

Group of orthologs #99. Best score 1280 bits
Score difference with first non-orthologous sequence - C.intestinalis:1020 S.scrofa:538

F6W1I6              	100.00%		P23220              	100.00%
                    	       		F1S2B3              	59.07%
Bootstrap support for F6W1I6 as seed ortholog is 100%.
Bootstrap support for P23220 as seed ortholog is 100%.

Group of orthologs #100. Best score 1275 bits
Score difference with first non-orthologous sequence - C.intestinalis:1275 S.scrofa:597

F6VBD0              	100.00%		F1S4W1              	100.00%
Bootstrap support for F6VBD0 as seed ortholog is 100%.
Bootstrap support for F1S4W1 as seed ortholog is 100%.

Group of orthologs #101. Best score 1275 bits
Score difference with first non-orthologous sequence - C.intestinalis:1275 S.scrofa:1275

F6Y8C3              	100.00%		F1SGS7              	100.00%
Bootstrap support for F6Y8C3 as seed ortholog is 100%.
Bootstrap support for F1SGS7 as seed ortholog is 100%.

Group of orthologs #102. Best score 1267 bits
Score difference with first non-orthologous sequence - C.intestinalis:1063 S.scrofa:552

F6TIJ9              	100.00%		F1SBG0              	100.00%
                    	       		F1RMB2              	43.42%
Bootstrap support for F6TIJ9 as seed ortholog is 100%.
Bootstrap support for F1SBG0 as seed ortholog is 100%.

Group of orthologs #103. Best score 1267 bits
Score difference with first non-orthologous sequence - C.intestinalis:1267 S.scrofa:1267

F6R8H4              	100.00%		F1SA74              	100.00%
Bootstrap support for F6R8H4 as seed ortholog is 100%.
Bootstrap support for F1SA74 as seed ortholog is 100%.

Group of orthologs #104. Best score 1266 bits
Score difference with first non-orthologous sequence - C.intestinalis:1266 S.scrofa:1266

F6SQF6              	100.00%		F1RYL3              	100.00%
Bootstrap support for F6SQF6 as seed ortholog is 100%.
Bootstrap support for F1RYL3 as seed ortholog is 100%.

Group of orthologs #105. Best score 1262 bits
Score difference with first non-orthologous sequence - C.intestinalis:1262 S.scrofa:1262

F7ABF6              	100.00%		F1RH60              	100.00%
                    	       		F1RZ02              	8.49%
Bootstrap support for F7ABF6 as seed ortholog is 100%.
Bootstrap support for F1RH60 as seed ortholog is 100%.

Group of orthologs #106. Best score 1255 bits
Score difference with first non-orthologous sequence - C.intestinalis:1255 S.scrofa:1255

F6Z3V6              	100.00%		F1SQJ7              	100.00%
Bootstrap support for F6Z3V6 as seed ortholog is 100%.
Bootstrap support for F1SQJ7 as seed ortholog is 100%.

Group of orthologs #107. Best score 1252 bits
Score difference with first non-orthologous sequence - C.intestinalis:1252 S.scrofa:1252

F6UXR3              	100.00%		I3LEW5              	100.00%
Bootstrap support for F6UXR3 as seed ortholog is 100%.
Bootstrap support for I3LEW5 as seed ortholog is 100%.

Group of orthologs #108. Best score 1248 bits
Score difference with first non-orthologous sequence - C.intestinalis:1151 S.scrofa:1248

F7AKQ3              	100.00%		F1SUF6              	100.00%
Bootstrap support for F7AKQ3 as seed ortholog is 100%.
Bootstrap support for F1SUF6 as seed ortholog is 100%.

Group of orthologs #109. Best score 1243 bits
Score difference with first non-orthologous sequence - C.intestinalis:1243 S.scrofa:882

F6TZX4              	100.00%		I3LR20              	100.00%
Bootstrap support for F6TZX4 as seed ortholog is 100%.
Bootstrap support for I3LR20 as seed ortholog is 100%.

Group of orthologs #110. Best score 1242 bits
Score difference with first non-orthologous sequence - C.intestinalis:1242 S.scrofa:316

H2XLC6              	100.00%		F1RQJ4              	100.00%
Bootstrap support for H2XLC6 as seed ortholog is 100%.
Bootstrap support for F1RQJ4 as seed ortholog is 100%.

Group of orthologs #111. Best score 1236 bits
Score difference with first non-orthologous sequence - C.intestinalis:1236 S.scrofa:924

F6Y4K6              	100.00%		F1S7C4              	100.00%
Bootstrap support for F6Y4K6 as seed ortholog is 100%.
Bootstrap support for F1S7C4 as seed ortholog is 100%.

Group of orthologs #112. Best score 1235 bits
Score difference with first non-orthologous sequence - C.intestinalis:1235 S.scrofa:519

F6W1V5              	100.00%		F1SCL6              	100.00%
                    	       		I3LTX1              	69.60%
                    	       		F1SC54              	26.61%
Bootstrap support for F6W1V5 as seed ortholog is 100%.
Bootstrap support for F1SCL6 as seed ortholog is 100%.

Group of orthologs #113. Best score 1235 bits
Score difference with first non-orthologous sequence - C.intestinalis:1235 S.scrofa:1235

F6XKY1              	100.00%		I3LII3              	100.00%
Bootstrap support for F6XKY1 as seed ortholog is 100%.
Bootstrap support for I3LII3 as seed ortholog is 100%.

Group of orthologs #114. Best score 1235 bits
Score difference with first non-orthologous sequence - C.intestinalis:1235 S.scrofa:1111

Q1RQ01              	100.00%		I3LN00              	100.00%
Bootstrap support for Q1RQ01 as seed ortholog is 100%.
Bootstrap support for I3LN00 as seed ortholog is 100%.

Group of orthologs #115. Best score 1234 bits
Score difference with first non-orthologous sequence - C.intestinalis:1234 S.scrofa:123

F6U9F4              	100.00%		I3LJW4              	100.00%
Bootstrap support for F6U9F4 as seed ortholog is 100%.
Bootstrap support for I3LJW4 as seed ortholog is 99%.

Group of orthologs #116. Best score 1233 bits
Score difference with first non-orthologous sequence - C.intestinalis:1233 S.scrofa:1233

F6QIX3              	100.00%		F1S8K5              	100.00%
Bootstrap support for F6QIX3 as seed ortholog is 100%.
Bootstrap support for F1S8K5 as seed ortholog is 100%.

Group of orthologs #117. Best score 1231 bits
Score difference with first non-orthologous sequence - C.intestinalis:1231 S.scrofa:789

F6R6F3              	100.00%		F1SCR1              	100.00%
                    	       		I3LCJ1              	33.15%
Bootstrap support for F6R6F3 as seed ortholog is 100%.
Bootstrap support for F1SCR1 as seed ortholog is 100%.

Group of orthologs #118. Best score 1229 bits
Score difference with first non-orthologous sequence - C.intestinalis:531 S.scrofa:1229

F6VWX8              	100.00%		F1SS26              	100.00%
                    	       		F1SBZ9              	31.17%
Bootstrap support for F6VWX8 as seed ortholog is 100%.
Bootstrap support for F1SS26 as seed ortholog is 100%.

Group of orthologs #119. Best score 1221 bits
Score difference with first non-orthologous sequence - C.intestinalis:1221 S.scrofa:936

F6S181              	100.00%		F1SUA2              	100.00%
Bootstrap support for F6S181 as seed ortholog is 100%.
Bootstrap support for F1SUA2 as seed ortholog is 100%.

Group of orthologs #120. Best score 1220 bits
Score difference with first non-orthologous sequence - C.intestinalis:1220 S.scrofa:1220

F6UM75              	100.00%		F1S557              	100.00%
Bootstrap support for F6UM75 as seed ortholog is 100%.
Bootstrap support for F1S557 as seed ortholog is 100%.

Group of orthologs #121. Best score 1218 bits
Score difference with first non-orthologous sequence - C.intestinalis:1218 S.scrofa:253

F6YK55              	100.00%		F1SV63              	100.00%
                    	       		F1SV64              	47.77%
Bootstrap support for F6YK55 as seed ortholog is 100%.
Bootstrap support for F1SV63 as seed ortholog is 100%.

Group of orthologs #122. Best score 1214 bits
Score difference with first non-orthologous sequence - C.intestinalis:1214 S.scrofa:1024

H2XVV8              	100.00%		I3LAJ5              	100.00%
Bootstrap support for H2XVV8 as seed ortholog is 100%.
Bootstrap support for I3LAJ5 as seed ortholog is 100%.

Group of orthologs #123. Best score 1211 bits
Score difference with first non-orthologous sequence - C.intestinalis:1211 S.scrofa:1211

F6R7T5              	100.00%		F1RK46              	100.00%
                    	       		I3L9U8              	41.87%
Bootstrap support for F6R7T5 as seed ortholog is 100%.
Bootstrap support for F1RK46 as seed ortholog is 100%.

Group of orthologs #124. Best score 1207 bits
Score difference with first non-orthologous sequence - C.intestinalis:1207 S.scrofa:597

F6RUN6              	100.00%		F1RFV9              	100.00%
                    	       		F1STG5              	20.78%
Bootstrap support for F6RUN6 as seed ortholog is 100%.
Bootstrap support for F1RFV9 as seed ortholog is 100%.

Group of orthologs #125. Best score 1206 bits
Score difference with first non-orthologous sequence - C.intestinalis:1206 S.scrofa:680

H2XNV5              	100.00%		F1RHL9              	100.00%
                    	       		I3LCP0              	43.80%
                    	       		F1RI39              	37.01%
Bootstrap support for H2XNV5 as seed ortholog is 100%.
Bootstrap support for F1RHL9 as seed ortholog is 100%.

Group of orthologs #126. Best score 1206 bits
Score difference with first non-orthologous sequence - C.intestinalis:1206 S.scrofa:1206

F6U7R9              	100.00%		F1RPH3              	100.00%
Bootstrap support for F6U7R9 as seed ortholog is 100%.
Bootstrap support for F1RPH3 as seed ortholog is 100%.

Group of orthologs #127. Best score 1198 bits
Score difference with first non-orthologous sequence - C.intestinalis:1198 S.scrofa:1198

F6YGJ7              	100.00%		F1RKZ6              	100.00%
Bootstrap support for F6YGJ7 as seed ortholog is 100%.
Bootstrap support for F1RKZ6 as seed ortholog is 100%.

Group of orthologs #128. Best score 1196 bits
Score difference with first non-orthologous sequence - C.intestinalis:1196 S.scrofa:295

F6SPZ6              	100.00%		F1SJ69              	100.00%
Bootstrap support for F6SPZ6 as seed ortholog is 100%.
Bootstrap support for F1SJ69 as seed ortholog is 99%.

Group of orthologs #129. Best score 1196 bits
Score difference with first non-orthologous sequence - C.intestinalis:1196 S.scrofa:1196

H2XKA9              	100.00%		I3LMJ9              	100.00%
Bootstrap support for H2XKA9 as seed ortholog is 100%.
Bootstrap support for I3LMJ9 as seed ortholog is 100%.

Group of orthologs #130. Best score 1195 bits
Score difference with first non-orthologous sequence - C.intestinalis:1082 S.scrofa:1076

F6YYE4              	100.00%		F1SRP0              	100.00%
                    	       		F1SP73              	84.60%
Bootstrap support for F6YYE4 as seed ortholog is 100%.
Bootstrap support for F1SRP0 as seed ortholog is 100%.

Group of orthologs #131. Best score 1193 bits
Score difference with first non-orthologous sequence - C.intestinalis:1193 S.scrofa:227

F7BNC1              	100.00%		F1RFK9              	100.00%
Bootstrap support for F7BNC1 as seed ortholog is 100%.
Bootstrap support for F1RFK9 as seed ortholog is 100%.

Group of orthologs #132. Best score 1185 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.scrofa:350

H2XS32              	100.00%		I3LS67              	100.00%
                    	       		I3LIK9              	56.95%
                    	       		F1SG08              	19.12%
Bootstrap support for H2XS32 as seed ortholog is 99%.
Bootstrap support for I3LS67 as seed ortholog is 100%.

Group of orthologs #133. Best score 1183 bits
Score difference with first non-orthologous sequence - C.intestinalis:1183 S.scrofa:1183

F7AWF9              	100.00%		F1S8Z0              	100.00%
                    	       		F1RR92              	30.42%
                    	       		F1S5C4              	13.46%
Bootstrap support for F7AWF9 as seed ortholog is 100%.
Bootstrap support for F1S8Z0 as seed ortholog is 100%.

Group of orthologs #134. Best score 1181 bits
Score difference with first non-orthologous sequence - C.intestinalis:1181 S.scrofa:1181

F6XC92              	100.00%		F1RP44              	100.00%
                    	       		F1SMM3              	58.35%
Bootstrap support for F6XC92 as seed ortholog is 100%.
Bootstrap support for F1RP44 as seed ortholog is 100%.

Group of orthologs #135. Best score 1179 bits
Score difference with first non-orthologous sequence - C.intestinalis:1179 S.scrofa:1179

F7AHP3              	100.00%		K7GPI8              	100.00%
Bootstrap support for F7AHP3 as seed ortholog is 100%.
Bootstrap support for K7GPI8 as seed ortholog is 100%.

Group of orthologs #136. Best score 1176 bits
Score difference with first non-orthologous sequence - C.intestinalis:1038 S.scrofa:510

F6QYE3              	100.00%		I3LIL4              	100.00%
                    	       		I3LCV6              	12.55%
Bootstrap support for F6QYE3 as seed ortholog is 100%.
Bootstrap support for I3LIL4 as seed ortholog is 100%.

Group of orthologs #137. Best score 1175 bits
Score difference with first non-orthologous sequence - C.intestinalis:630 S.scrofa:944

H2XVU8              	100.00%		F1SBK1              	100.00%
                    	       		F1S9V0              	13.48%
Bootstrap support for H2XVU8 as seed ortholog is 100%.
Bootstrap support for F1SBK1 as seed ortholog is 100%.

Group of orthologs #138. Best score 1174 bits
Score difference with first non-orthologous sequence - C.intestinalis:1174 S.scrofa:1123

H2XKD5              	100.00%		F1SHL3              	100.00%
                    	       		F1SBH2              	46.89%
Bootstrap support for H2XKD5 as seed ortholog is 100%.
Bootstrap support for F1SHL3 as seed ortholog is 100%.

Group of orthologs #139. Best score 1173 bits
Score difference with first non-orthologous sequence - C.intestinalis:1173 S.scrofa:1173

F6ZN98              	100.00%		F1SRI4              	100.00%
Bootstrap support for F6ZN98 as seed ortholog is 100%.
Bootstrap support for F1SRI4 as seed ortholog is 100%.

Group of orthologs #140. Best score 1172 bits
Score difference with first non-orthologous sequence - C.intestinalis:1172 S.scrofa:934

F6SI15              	100.00%		I3LHZ9              	100.00%
                    	       		I3LUG7              	53.36%
Bootstrap support for F6SI15 as seed ortholog is 100%.
Bootstrap support for I3LHZ9 as seed ortholog is 100%.

Group of orthologs #141. Best score 1171 bits
Score difference with first non-orthologous sequence - C.intestinalis:564 S.scrofa:458

F6ZHQ8              	100.00%		I3LGF0              	100.00%
Bootstrap support for F6ZHQ8 as seed ortholog is 100%.
Bootstrap support for I3LGF0 as seed ortholog is 100%.

Group of orthologs #142. Best score 1167 bits
Score difference with first non-orthologous sequence - C.intestinalis:1167 S.scrofa:1167

F6UHM2              	100.00%		I3LM93              	100.00%
                    	       		F1SEX5              	62.21%
Bootstrap support for F6UHM2 as seed ortholog is 100%.
Bootstrap support for I3LM93 as seed ortholog is 100%.

Group of orthologs #143. Best score 1165 bits
Score difference with first non-orthologous sequence - C.intestinalis:1165 S.scrofa:1165

F6Z5E6              	100.00%		F1SBU7              	100.00%
Bootstrap support for F6Z5E6 as seed ortholog is 100%.
Bootstrap support for F1SBU7 as seed ortholog is 100%.

Group of orthologs #144. Best score 1163 bits
Score difference with first non-orthologous sequence - C.intestinalis:1163 S.scrofa:1163

F6V993              	100.00%		F1RJP9              	100.00%
                    	       		F1RUH8              	22.81%
Bootstrap support for F6V993 as seed ortholog is 100%.
Bootstrap support for F1RJP9 as seed ortholog is 100%.

Group of orthologs #145. Best score 1162 bits
Score difference with first non-orthologous sequence - C.intestinalis:1162 S.scrofa:1162

H2XNV6              	100.00%		F1RIV4              	100.00%
Bootstrap support for H2XNV6 as seed ortholog is 100%.
Bootstrap support for F1RIV4 as seed ortholog is 100%.

Group of orthologs #146. Best score 1156 bits
Score difference with first non-orthologous sequence - C.intestinalis:1156 S.scrofa:199

H2Y089              	100.00%		F1SNR3              	100.00%
Bootstrap support for H2Y089 as seed ortholog is 100%.
Bootstrap support for F1SNR3 as seed ortholog is 99%.

Group of orthologs #147. Best score 1155 bits
Score difference with first non-orthologous sequence - C.intestinalis:1155 S.scrofa:875

H2XLC2              	100.00%		I3LV02              	100.00%
                    	       		I3L6Y6              	54.39%
                    	       		F1S182              	25.92%
Bootstrap support for H2XLC2 as seed ortholog is 100%.
Bootstrap support for I3LV02 as seed ortholog is 100%.

Group of orthologs #148. Best score 1153 bits
Score difference with first non-orthologous sequence - C.intestinalis:1153 S.scrofa:1153

F7BPQ7              	100.00%		F1S775              	100.00%
Bootstrap support for F7BPQ7 as seed ortholog is 100%.
Bootstrap support for F1S775 as seed ortholog is 100%.

Group of orthologs #149. Best score 1149 bits
Score difference with first non-orthologous sequence - C.intestinalis:1149 S.scrofa:1149

F6SWL4              	100.00%		F1SCA0              	100.00%
                    	       		I3LTQ1              	84.69%
Bootstrap support for F6SWL4 as seed ortholog is 100%.
Bootstrap support for F1SCA0 as seed ortholog is 100%.

Group of orthologs #150. Best score 1149 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 S.scrofa:652

F6UYA6              	100.00%		F1S3A8              	100.00%
Bootstrap support for F6UYA6 as seed ortholog is 100%.
Bootstrap support for F1S3A8 as seed ortholog is 100%.

Group of orthologs #151. Best score 1149 bits
Score difference with first non-orthologous sequence - C.intestinalis:1149 S.scrofa:1149

F6WQB5              	100.00%		F1SI06              	100.00%
Bootstrap support for F6WQB5 as seed ortholog is 100%.
Bootstrap support for F1SI06 as seed ortholog is 100%.

Group of orthologs #152. Best score 1141 bits
Score difference with first non-orthologous sequence - C.intestinalis:1141 S.scrofa:1141

F7AB73              	100.00%		I3LRW2              	100.00%
Bootstrap support for F7AB73 as seed ortholog is 100%.
Bootstrap support for I3LRW2 as seed ortholog is 100%.

Group of orthologs #153. Best score 1140 bits
Score difference with first non-orthologous sequence - C.intestinalis:1140 S.scrofa:504

F6YY38              	100.00%		I3LUS1              	100.00%
Bootstrap support for F6YY38 as seed ortholog is 100%.
Bootstrap support for I3LUS1 as seed ortholog is 99%.

Group of orthologs #154. Best score 1137 bits
Score difference with first non-orthologous sequence - C.intestinalis:1137 S.scrofa:1137

H2Y0S6              	100.00%		F1S282              	100.00%
Bootstrap support for H2Y0S6 as seed ortholog is 100%.
Bootstrap support for F1S282 as seed ortholog is 100%.

Group of orthologs #155. Best score 1137 bits
Score difference with first non-orthologous sequence - C.intestinalis:1137 S.scrofa:1137

F6TF50              	100.00%		K7GMR6              	100.00%
Bootstrap support for F6TF50 as seed ortholog is 100%.
Bootstrap support for K7GMR6 as seed ortholog is 100%.

Group of orthologs #156. Best score 1132 bits
Score difference with first non-orthologous sequence - C.intestinalis:1132 S.scrofa:1132

F6RMU1              	100.00%		F1RWJ5              	100.00%
Bootstrap support for F6RMU1 as seed ortholog is 100%.
Bootstrap support for F1RWJ5 as seed ortholog is 100%.

Group of orthologs #157. Best score 1130 bits
Score difference with first non-orthologous sequence - C.intestinalis:1130 S.scrofa:175

F6R4B5              	100.00%		F1RI97              	100.00%
                    	       		I3LRS3              	49.85%
Bootstrap support for F6R4B5 as seed ortholog is 100%.
Bootstrap support for F1RI97 as seed ortholog is 63%.
Alternative seed ortholog is F1S2G1 (175 bits away from this cluster)

Group of orthologs #158. Best score 1129 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 S.scrofa:1129

F6WKG4              	100.00%		Q8HZK3              	100.00%
F6XBM6              	16.94%		Q8HZK2              	62.99%
F7B363              	5.35%		
Bootstrap support for F6WKG4 as seed ortholog is 100%.
Bootstrap support for Q8HZK3 as seed ortholog is 100%.

Group of orthologs #159. Best score 1129 bits
Score difference with first non-orthologous sequence - C.intestinalis:1129 S.scrofa:1129

F7BEI8              	100.00%		F1S5N5              	100.00%
Bootstrap support for F7BEI8 as seed ortholog is 100%.
Bootstrap support for F1S5N5 as seed ortholog is 100%.

Group of orthologs #160. Best score 1128 bits
Score difference with first non-orthologous sequence - C.intestinalis:1128 S.scrofa:1128

F6TML4              	100.00%		F1RXZ5              	100.00%
Bootstrap support for F6TML4 as seed ortholog is 100%.
Bootstrap support for F1RXZ5 as seed ortholog is 100%.

Group of orthologs #161. Best score 1124 bits
Score difference with first non-orthologous sequence - C.intestinalis:1124 S.scrofa:1124

H2XZM7              	100.00%		I3LDL4              	100.00%
Bootstrap support for H2XZM7 as seed ortholog is 100%.
Bootstrap support for I3LDL4 as seed ortholog is 100%.

Group of orthologs #162. Best score 1123 bits
Score difference with first non-orthologous sequence - C.intestinalis:682 S.scrofa:772

H2XRP2              	100.00%		F1RSA2              	100.00%
                    	       		F1S5U9              	9.67%
Bootstrap support for H2XRP2 as seed ortholog is 100%.
Bootstrap support for F1RSA2 as seed ortholog is 100%.

Group of orthologs #163. Best score 1123 bits
Score difference with first non-orthologous sequence - C.intestinalis:1123 S.scrofa:1123

F6VSQ8              	100.00%		F1RSV8              	100.00%
Bootstrap support for F6VSQ8 as seed ortholog is 100%.
Bootstrap support for F1RSV8 as seed ortholog is 100%.

Group of orthologs #164. Best score 1121 bits
Score difference with first non-orthologous sequence - C.intestinalis:1121 S.scrofa:441

F6VF77              	100.00%		F1RRW8              	100.00%
                    	       		F1S593              	19.10%
Bootstrap support for F6VF77 as seed ortholog is 100%.
Bootstrap support for F1RRW8 as seed ortholog is 100%.

Group of orthologs #165. Best score 1116 bits
Score difference with first non-orthologous sequence - C.intestinalis:1116 S.scrofa:117

F6TCT1              	100.00%		F1RRH2              	100.00%
                    	       		I3L6P5              	11.50%
                    	       		F1RPQ2              	10.22%
Bootstrap support for F6TCT1 as seed ortholog is 100%.
Bootstrap support for F1RRH2 as seed ortholog is 99%.

Group of orthologs #166. Best score 1114 bits
Score difference with first non-orthologous sequence - C.intestinalis:1114 S.scrofa:1114

F7B9N2              	100.00%		I3LQ79              	100.00%
Bootstrap support for F7B9N2 as seed ortholog is 100%.
Bootstrap support for I3LQ79 as seed ortholog is 100%.

Group of orthologs #167. Best score 1112 bits
Score difference with first non-orthologous sequence - C.intestinalis:580 S.scrofa:354

F6SH00              	100.00%		F1S3S6              	100.00%
Bootstrap support for F6SH00 as seed ortholog is 100%.
Bootstrap support for F1S3S6 as seed ortholog is 100%.

Group of orthologs #168. Best score 1110 bits
Score difference with first non-orthologous sequence - C.intestinalis:1110 S.scrofa:1110

F6THF9              	100.00%		F1S3N1              	100.00%
Bootstrap support for F6THF9 as seed ortholog is 100%.
Bootstrap support for F1S3N1 as seed ortholog is 100%.

Group of orthologs #169. Best score 1104 bits
Score difference with first non-orthologous sequence - C.intestinalis:1104 S.scrofa:1104

F6ST44              	100.00%		F1RL05              	100.00%
Bootstrap support for F6ST44 as seed ortholog is 100%.
Bootstrap support for F1RL05 as seed ortholog is 100%.

Group of orthologs #170. Best score 1102 bits
Score difference with first non-orthologous sequence - C.intestinalis:550 S.scrofa:667

F6WRK8              	100.00%		F1RZD2              	100.00%
                    	       		F1RPQ8              	30.84%
                    	       		F1RZC1              	24.79%
Bootstrap support for F6WRK8 as seed ortholog is 100%.
Bootstrap support for F1RZD2 as seed ortholog is 100%.

Group of orthologs #171. Best score 1100 bits
Score difference with first non-orthologous sequence - C.intestinalis:1100 S.scrofa:1100

H2Y0K6              	100.00%		F1RFB1              	100.00%
Bootstrap support for H2Y0K6 as seed ortholog is 100%.
Bootstrap support for F1RFB1 as seed ortholog is 100%.

Group of orthologs #172. Best score 1098 bits
Score difference with first non-orthologous sequence - C.intestinalis:1098 S.scrofa:797

F6PW28              	100.00%		F1SAD7              	100.00%
Bootstrap support for F6PW28 as seed ortholog is 100%.
Bootstrap support for F1SAD7 as seed ortholog is 100%.

Group of orthologs #173. Best score 1097 bits
Score difference with first non-orthologous sequence - C.intestinalis:1097 S.scrofa:707

F6SUT6              	100.00%		F1SKU0              	100.00%
                    	       		F8UV45              	25.03%
Bootstrap support for F6SUT6 as seed ortholog is 100%.
Bootstrap support for F1SKU0 as seed ortholog is 100%.

Group of orthologs #174. Best score 1094 bits
Score difference with first non-orthologous sequence - C.intestinalis:1094 S.scrofa:1094

F6SFQ0              	100.00%		A1YVX4              	100.00%
                    	       		F1S4N3              	7.59%
Bootstrap support for F6SFQ0 as seed ortholog is 100%.
Bootstrap support for A1YVX4 as seed ortholog is 100%.

Group of orthologs #175. Best score 1094 bits
Score difference with first non-orthologous sequence - C.intestinalis:1094 S.scrofa:1094

F6US09              	100.00%		F1SQP0              	100.00%
                    	       		F1RPM0              	18.91%
Bootstrap support for F6US09 as seed ortholog is 100%.
Bootstrap support for F1SQP0 as seed ortholog is 100%.

Group of orthologs #176. Best score 1094 bits
Score difference with first non-orthologous sequence - C.intestinalis:1094 S.scrofa:1094

F6U4L6              	100.00%		F1RQW4              	100.00%
Bootstrap support for F6U4L6 as seed ortholog is 100%.
Bootstrap support for F1RQW4 as seed ortholog is 100%.

Group of orthologs #177. Best score 1094 bits
Score difference with first non-orthologous sequence - C.intestinalis:1094 S.scrofa:350

H2Y1Z9              	100.00%		F1S431              	100.00%
Bootstrap support for H2Y1Z9 as seed ortholog is 100%.
Bootstrap support for F1S431 as seed ortholog is 100%.

Group of orthologs #178. Best score 1092 bits
Score difference with first non-orthologous sequence - C.intestinalis:1015 S.scrofa:1092

F6TQ69              	100.00%		I3LDM3              	100.00%
                    	       		F1SGB6              	13.49%
Bootstrap support for F6TQ69 as seed ortholog is 100%.
Bootstrap support for I3LDM3 as seed ortholog is 100%.

Group of orthologs #179. Best score 1092 bits
Score difference with first non-orthologous sequence - C.intestinalis:1092 S.scrofa:1092

F6UDK5              	100.00%		Q28969              	100.00%
Bootstrap support for F6UDK5 as seed ortholog is 100%.
Bootstrap support for Q28969 as seed ortholog is 100%.

Group of orthologs #180. Best score 1089 bits
Score difference with first non-orthologous sequence - C.intestinalis:1089 S.scrofa:1089

H2XTU1              	100.00%		F1S5S6              	100.00%
Bootstrap support for H2XTU1 as seed ortholog is 100%.
Bootstrap support for F1S5S6 as seed ortholog is 100%.

Group of orthologs #181. Best score 1088 bits
Score difference with first non-orthologous sequence - C.intestinalis:1088 S.scrofa:1088

F6YN07              	100.00%		F1SMG3              	100.00%
Bootstrap support for F6YN07 as seed ortholog is 100%.
Bootstrap support for F1SMG3 as seed ortholog is 100%.

Group of orthologs #182. Best score 1086 bits
Score difference with first non-orthologous sequence - C.intestinalis:1086 S.scrofa:1086

H2XQI5              	100.00%		I3L712              	100.00%
Bootstrap support for H2XQI5 as seed ortholog is 100%.
Bootstrap support for I3L712 as seed ortholog is 100%.

Group of orthologs #183. Best score 1085 bits
Score difference with first non-orthologous sequence - C.intestinalis:1085 S.scrofa:1085

F6Z4U5              	100.00%		F1S5E5              	100.00%
Bootstrap support for F6Z4U5 as seed ortholog is 100%.
Bootstrap support for F1S5E5 as seed ortholog is 100%.

Group of orthologs #184. Best score 1084 bits
Score difference with first non-orthologous sequence - C.intestinalis:861 S.scrofa:342

F6T8N6              	100.00%		F1RP54              	100.00%
                    	       		F1RP55              	80.93%
Bootstrap support for F6T8N6 as seed ortholog is 100%.
Bootstrap support for F1RP54 as seed ortholog is 100%.

Group of orthologs #185. Best score 1082 bits
Score difference with first non-orthologous sequence - C.intestinalis:717 S.scrofa:590

F6S6B2              	100.00%		F1SDV6              	100.00%
Bootstrap support for F6S6B2 as seed ortholog is 100%.
Bootstrap support for F1SDV6 as seed ortholog is 100%.

Group of orthologs #186. Best score 1081 bits
Score difference with first non-orthologous sequence - C.intestinalis:915 S.scrofa:564

F6UK45              	100.00%		I3LUB8              	100.00%
                    	       		F1RWC5              	38.55%
                    	       		F1SKH3              	35.39%
Bootstrap support for F6UK45 as seed ortholog is 100%.
Bootstrap support for I3LUB8 as seed ortholog is 100%.

Group of orthologs #187. Best score 1076 bits
Score difference with first non-orthologous sequence - C.intestinalis:977 S.scrofa:416

F6Q5K0              	100.00%		F1RGJ2              	100.00%
Bootstrap support for F6Q5K0 as seed ortholog is 100%.
Bootstrap support for F1RGJ2 as seed ortholog is 100%.

Group of orthologs #188. Best score 1076 bits
Score difference with first non-orthologous sequence - C.intestinalis:1076 S.scrofa:1076

H2Y1Y9              	100.00%		F1RRR5              	100.00%
Bootstrap support for H2Y1Y9 as seed ortholog is 100%.
Bootstrap support for F1RRR5 as seed ortholog is 100%.

Group of orthologs #189. Best score 1071 bits
Score difference with first non-orthologous sequence - C.intestinalis:1071 S.scrofa:1071

H2XV68              	100.00%		F1RVV6              	100.00%
Bootstrap support for H2XV68 as seed ortholog is 100%.
Bootstrap support for F1RVV6 as seed ortholog is 100%.

Group of orthologs #190. Best score 1071 bits
Score difference with first non-orthologous sequence - C.intestinalis:771 S.scrofa:785

F6Z4G6              	100.00%		I3L7E5              	100.00%
Bootstrap support for F6Z4G6 as seed ortholog is 100%.
Bootstrap support for I3L7E5 as seed ortholog is 100%.

Group of orthologs #191. Best score 1067 bits
Score difference with first non-orthologous sequence - C.intestinalis:1067 S.scrofa:189

F6Q5L9              	100.00%		F1SHW6              	100.00%
                    	       		F1RIF9              	55.16%
Bootstrap support for F6Q5L9 as seed ortholog is 100%.
Bootstrap support for F1SHW6 as seed ortholog is 99%.

Group of orthologs #192. Best score 1067 bits
Score difference with first non-orthologous sequence - C.intestinalis:797 S.scrofa:824

H2XSG7              	100.00%		F1SIW0              	100.00%
Bootstrap support for H2XSG7 as seed ortholog is 100%.
Bootstrap support for F1SIW0 as seed ortholog is 100%.

Group of orthologs #193. Best score 1067 bits
Score difference with first non-orthologous sequence - C.intestinalis:1067 S.scrofa:806

H2XJF2              	100.00%		Q5D891              	100.00%
Bootstrap support for H2XJF2 as seed ortholog is 100%.
Bootstrap support for Q5D891 as seed ortholog is 100%.

Group of orthologs #194. Best score 1064 bits
Score difference with first non-orthologous sequence - C.intestinalis:1064 S.scrofa:482

F6ZRN0              	100.00%		F1RLQ9              	100.00%
Bootstrap support for F6ZRN0 as seed ortholog is 100%.
Bootstrap support for F1RLQ9 as seed ortholog is 100%.

Group of orthologs #195. Best score 1064 bits
Score difference with first non-orthologous sequence - C.intestinalis:955 S.scrofa:926

F7ADN1              	100.00%		F1SH51              	100.00%
Bootstrap support for F7ADN1 as seed ortholog is 100%.
Bootstrap support for F1SH51 as seed ortholog is 100%.

Group of orthologs #196. Best score 1062 bits
Score difference with first non-orthologous sequence - C.intestinalis:1062 S.scrofa:854

H2XTN7              	100.00%		F1RKK2              	100.00%
                    	       		F1SN65              	22.14%
Bootstrap support for H2XTN7 as seed ortholog is 100%.
Bootstrap support for F1RKK2 as seed ortholog is 100%.

Group of orthologs #197. Best score 1062 bits
Score difference with first non-orthologous sequence - C.intestinalis:1062 S.scrofa:1062

F6QSR3              	100.00%		F1RLY9              	100.00%
Bootstrap support for F6QSR3 as seed ortholog is 100%.
Bootstrap support for F1RLY9 as seed ortholog is 100%.

Group of orthologs #198. Best score 1062 bits
Score difference with first non-orthologous sequence - C.intestinalis:975 S.scrofa:1062

F6SBF1              	100.00%		F1SCH5              	100.00%
Bootstrap support for F6SBF1 as seed ortholog is 100%.
Bootstrap support for F1SCH5 as seed ortholog is 100%.

Group of orthologs #199. Best score 1062 bits
Score difference with first non-orthologous sequence - C.intestinalis:1062 S.scrofa:1062

F6XQ09              	100.00%		I3LEJ8              	100.00%
Bootstrap support for F6XQ09 as seed ortholog is 100%.
Bootstrap support for I3LEJ8 as seed ortholog is 100%.

Group of orthologs #200. Best score 1057 bits
Score difference with first non-orthologous sequence - C.intestinalis:1057 S.scrofa:1057

F6XJM1              	100.00%		F1RSN3              	100.00%
Bootstrap support for F6XJM1 as seed ortholog is 100%.
Bootstrap support for F1RSN3 as seed ortholog is 100%.

Group of orthologs #201. Best score 1052 bits
Score difference with first non-orthologous sequence - C.intestinalis:1052 S.scrofa:1052

F7BBW9              	100.00%		F1SHD7              	100.00%
Bootstrap support for F7BBW9 as seed ortholog is 100%.
Bootstrap support for F1SHD7 as seed ortholog is 100%.

Group of orthologs #202. Best score 1051 bits
Score difference with first non-orthologous sequence - C.intestinalis:1051 S.scrofa:1051

F6XSF3              	100.00%		I3L6Y9              	100.00%
Bootstrap support for F6XSF3 as seed ortholog is 100%.
Bootstrap support for I3L6Y9 as seed ortholog is 100%.

Group of orthologs #203. Best score 1045 bits
Score difference with first non-orthologous sequence - C.intestinalis:1045 S.scrofa:797

F6U3T3              	100.00%		K7GQW4              	100.00%
                    	       		F1SBY1              	39.39%
                    	       		F1S1R0              	25.06%
                    	       		F1STS3              	18.16%
Bootstrap support for F6U3T3 as seed ortholog is 100%.
Bootstrap support for K7GQW4 as seed ortholog is 100%.

Group of orthologs #204. Best score 1045 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 S.scrofa:1045

H2XSM0              	100.00%		F1SAU5              	100.00%
Bootstrap support for H2XSM0 as seed ortholog is 100%.
Bootstrap support for F1SAU5 as seed ortholog is 100%.

Group of orthologs #205. Best score 1043 bits
Score difference with first non-orthologous sequence - C.intestinalis:1043 S.scrofa:1043

F6XU15              	100.00%		F1RRF2              	100.00%
Bootstrap support for F6XU15 as seed ortholog is 100%.
Bootstrap support for F1RRF2 as seed ortholog is 100%.

Group of orthologs #206. Best score 1039 bits
Score difference with first non-orthologous sequence - C.intestinalis:1039 S.scrofa:1039

F6TDD6              	100.00%		F1SHY2              	100.00%
Bootstrap support for F6TDD6 as seed ortholog is 100%.
Bootstrap support for F1SHY2 as seed ortholog is 100%.

Group of orthologs #207. Best score 1034 bits
Score difference with first non-orthologous sequence - C.intestinalis:1034 S.scrofa:265

F6XHQ2              	100.00%		F1SU53              	100.00%
Bootstrap support for F6XHQ2 as seed ortholog is 100%.
Bootstrap support for F1SU53 as seed ortholog is 100%.

Group of orthologs #208. Best score 1033 bits
Score difference with first non-orthologous sequence - C.intestinalis:1033 S.scrofa:1033

F6ZZL8              	100.00%		I3LBV8              	100.00%
                    	       		F1S7U4              	12.86%
Bootstrap support for F6ZZL8 as seed ortholog is 100%.
Bootstrap support for I3LBV8 as seed ortholog is 100%.

Group of orthologs #209. Best score 1030 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 S.scrofa:909

F6V1Q0              	100.00%		F1S4A9              	100.00%
                    	       		I3LDT5              	32.25%
Bootstrap support for F6V1Q0 as seed ortholog is 100%.
Bootstrap support for F1S4A9 as seed ortholog is 100%.

Group of orthologs #210. Best score 1027 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:3

F6W8I3              	100.00%		Q6S4N2              	100.00%
                    	       		P34930              	89.70%
                    	       		I3L7U0              	63.09%
                    	       		A5A8V7              	43.78%
                    	       		Q04967              	24.89%
                    	       		F1SA70              	15.45%
Bootstrap support for F6W8I3 as seed ortholog is 99%.
Bootstrap support for Q6S4N2 as seed ortholog is 76%.

Group of orthologs #211. Best score 1026 bits
Score difference with first non-orthologous sequence - C.intestinalis:1026 S.scrofa:134

F7BGT4              	100.00%		F1RXD3              	100.00%
Bootstrap support for F7BGT4 as seed ortholog is 100%.
Bootstrap support for F1RXD3 as seed ortholog is 97%.

Group of orthologs #212. Best score 1020 bits
Score difference with first non-orthologous sequence - C.intestinalis:1020 S.scrofa:1020

F6XY03              	100.00%		Q29092              	100.00%
Bootstrap support for F6XY03 as seed ortholog is 100%.
Bootstrap support for Q29092 as seed ortholog is 100%.

Group of orthologs #213. Best score 1019 bits
Score difference with first non-orthologous sequence - C.intestinalis:920 S.scrofa:911

H2XJT5              	100.00%		Q29048              	100.00%
Bootstrap support for H2XJT5 as seed ortholog is 100%.
Bootstrap support for Q29048 as seed ortholog is 100%.

Group of orthologs #214. Best score 1018 bits
Score difference with first non-orthologous sequence - C.intestinalis:1018 S.scrofa:276

F6QIR4              	100.00%		F1S4D4              	100.00%
Bootstrap support for F6QIR4 as seed ortholog is 100%.
Bootstrap support for F1S4D4 as seed ortholog is 99%.

Group of orthologs #215. Best score 1014 bits
Score difference with first non-orthologous sequence - C.intestinalis:1014 S.scrofa:1014

H2XNX0              	100.00%		F1RP07              	100.00%
Bootstrap support for H2XNX0 as seed ortholog is 100%.
Bootstrap support for F1RP07 as seed ortholog is 100%.

Group of orthologs #216. Best score 1012 bits
Score difference with first non-orthologous sequence - C.intestinalis:1012 S.scrofa:1012

F6R8V3              	100.00%		F1S4P6              	100.00%
Bootstrap support for F6R8V3 as seed ortholog is 100%.
Bootstrap support for F1S4P6 as seed ortholog is 100%.

Group of orthologs #217. Best score 1012 bits
Score difference with first non-orthologous sequence - C.intestinalis:651 S.scrofa:589

F6YUT1              	100.00%		F1RWJ6              	100.00%
Bootstrap support for F6YUT1 as seed ortholog is 100%.
Bootstrap support for F1RWJ6 as seed ortholog is 100%.

Group of orthologs #218. Best score 1010 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 S.scrofa:533

H2XU53              	100.00%		F1RGJ3              	100.00%
Bootstrap support for H2XU53 as seed ortholog is 100%.
Bootstrap support for F1RGJ3 as seed ortholog is 100%.

Group of orthologs #219. Best score 1008 bits
Score difference with first non-orthologous sequence - C.intestinalis:1008 S.scrofa:1008

F6PKA1              	100.00%		F1RU62              	100.00%
                    	       		F1RNM6              	6.37%
Bootstrap support for F6PKA1 as seed ortholog is 100%.
Bootstrap support for F1RU62 as seed ortholog is 100%.

Group of orthologs #220. Best score 1008 bits
Score difference with first non-orthologous sequence - C.intestinalis:1008 S.scrofa:479

F6PYU7              	100.00%		Q2HYU2              	100.00%
Bootstrap support for F6PYU7 as seed ortholog is 100%.
Bootstrap support for Q2HYU2 as seed ortholog is 100%.

Group of orthologs #221. Best score 1006 bits
Score difference with first non-orthologous sequence - C.intestinalis:1006 S.scrofa:1006

F7AEZ3              	100.00%		P23687              	100.00%
Bootstrap support for F7AEZ3 as seed ortholog is 100%.
Bootstrap support for P23687 as seed ortholog is 100%.

Group of orthologs #222. Best score 1003 bits
Score difference with first non-orthologous sequence - C.intestinalis:1003 S.scrofa:776

F6WKV2              	100.00%		F1RQP6              	100.00%
Bootstrap support for F6WKV2 as seed ortholog is 100%.
Bootstrap support for F1RQP6 as seed ortholog is 100%.

Group of orthologs #223. Best score 1002 bits
Score difference with first non-orthologous sequence - C.intestinalis:1002 S.scrofa:905

H2Y2W2              	100.00%		I3LVF2              	100.00%
Bootstrap support for H2Y2W2 as seed ortholog is 100%.
Bootstrap support for I3LVF2 as seed ortholog is 100%.

Group of orthologs #224. Best score 1000 bits
Score difference with first non-orthologous sequence - C.intestinalis:1000 S.scrofa:208

F6R356              	100.00%		F1S0R1              	100.00%
Bootstrap support for F6R356 as seed ortholog is 100%.
Bootstrap support for F1S0R1 as seed ortholog is 99%.

Group of orthologs #225. Best score 998 bits
Score difference with first non-orthologous sequence - C.intestinalis:998 S.scrofa:896

F6RCK1              	100.00%		F1SSH5              	100.00%
Bootstrap support for F6RCK1 as seed ortholog is 100%.
Bootstrap support for F1SSH5 as seed ortholog is 100%.

Group of orthologs #226. Best score 997 bits
Score difference with first non-orthologous sequence - C.intestinalis:917 S.scrofa:997

F6XZ43              	100.00%		F1RS49              	100.00%
Bootstrap support for F6XZ43 as seed ortholog is 100%.
Bootstrap support for F1RS49 as seed ortholog is 100%.

Group of orthologs #227. Best score 996 bits
Score difference with first non-orthologous sequence - C.intestinalis:996 S.scrofa:830

F6Q6T5              	100.00%		F1SQK4              	100.00%
                    	       		F1SD91              	20.38%
Bootstrap support for F6Q6T5 as seed ortholog is 100%.
Bootstrap support for F1SQK4 as seed ortholog is 100%.

Group of orthologs #228. Best score 996 bits
Score difference with first non-orthologous sequence - C.intestinalis:996 S.scrofa:772

F7AXL0              	100.00%		F1RQH3              	100.00%
                    	       		I3LH80              	15.80%
Bootstrap support for F7AXL0 as seed ortholog is 100%.
Bootstrap support for F1RQH3 as seed ortholog is 100%.

Group of orthologs #229. Best score 994 bits
Score difference with first non-orthologous sequence - C.intestinalis:994 S.scrofa:644

F6PQW3              	100.00%		F1RVQ5              	100.00%
                    	       		F1SSJ8              	25.29%
Bootstrap support for F6PQW3 as seed ortholog is 100%.
Bootstrap support for F1RVQ5 as seed ortholog is 99%.

Group of orthologs #230. Best score 994 bits
Score difference with first non-orthologous sequence - C.intestinalis:994 S.scrofa:994

F6ZW95              	100.00%		F1SF42              	100.00%
Bootstrap support for F6ZW95 as seed ortholog is 100%.
Bootstrap support for F1SF42 as seed ortholog is 100%.

Group of orthologs #231. Best score 991 bits
Score difference with first non-orthologous sequence - C.intestinalis:991 S.scrofa:991

F7A8M5              	100.00%		F1RGB9              	100.00%
Bootstrap support for F7A8M5 as seed ortholog is 100%.
Bootstrap support for F1RGB9 as seed ortholog is 100%.

Group of orthologs #232. Best score 990 bits
Score difference with first non-orthologous sequence - C.intestinalis:990 S.scrofa:990

H2XJF3              	100.00%		F1SG40              	100.00%
Bootstrap support for H2XJF3 as seed ortholog is 100%.
Bootstrap support for F1SG40 as seed ortholog is 100%.

Group of orthologs #233. Best score 987 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 S.scrofa:987

F6T2M3              	100.00%		F1RGS0              	100.00%
                    	       		F1RF28              	6.38%
                    	       		F1S902              	5.33%
Bootstrap support for F6T2M3 as seed ortholog is 56%.
Alternative seed ortholog is F6TNY6 (11 bits away from this cluster)
Bootstrap support for F1RGS0 as seed ortholog is 100%.

Group of orthologs #234. Best score 987 bits
Score difference with first non-orthologous sequence - C.intestinalis:987 S.scrofa:729

F6RMI2              	100.00%		F1RM55              	100.00%
                    	       		F1RMI9              	20.15%
Bootstrap support for F6RMI2 as seed ortholog is 100%.
Bootstrap support for F1RM55 as seed ortholog is 100%.

Group of orthologs #235. Best score 985 bits
Score difference with first non-orthologous sequence - C.intestinalis:985 S.scrofa:985

F6V136              	100.00%		F1RSN8              	100.00%
Bootstrap support for F6V136 as seed ortholog is 100%.
Bootstrap support for F1RSN8 as seed ortholog is 100%.

Group of orthologs #236. Best score 985 bits
Score difference with first non-orthologous sequence - C.intestinalis:985 S.scrofa:611

F6Y8V9              	100.00%		F1S046              	100.00%
Bootstrap support for F6Y8V9 as seed ortholog is 100%.
Bootstrap support for F1S046 as seed ortholog is 100%.

Group of orthologs #237. Best score 984 bits
Score difference with first non-orthologous sequence - C.intestinalis:984 S.scrofa:100

F6SI05              	100.00%		F1SP18              	100.00%
Bootstrap support for F6SI05 as seed ortholog is 100%.
Bootstrap support for F1SP18 as seed ortholog is 99%.

Group of orthologs #238. Best score 983 bits
Score difference with first non-orthologous sequence - C.intestinalis:894 S.scrofa:230

F6X2D1              	100.00%		F1SFG4              	100.00%
Bootstrap support for F6X2D1 as seed ortholog is 100%.
Bootstrap support for F1SFG4 as seed ortholog is 99%.

Group of orthologs #239. Best score 983 bits
Score difference with first non-orthologous sequence - C.intestinalis:983 S.scrofa:983

F6ZJZ6              	100.00%		F1SIB5              	100.00%
Bootstrap support for F6ZJZ6 as seed ortholog is 100%.
Bootstrap support for F1SIB5 as seed ortholog is 100%.

Group of orthologs #240. Best score 983 bits
Score difference with first non-orthologous sequence - C.intestinalis:983 S.scrofa:983

F7BJA3              	100.00%		I3L7Q4              	100.00%
Bootstrap support for F7BJA3 as seed ortholog is 100%.
Bootstrap support for I3L7Q4 as seed ortholog is 100%.

Group of orthologs #241. Best score 977 bits
Score difference with first non-orthologous sequence - C.intestinalis:977 S.scrofa:977

F6XJU3              	100.00%		F1SST9              	100.00%
Bootstrap support for F6XJU3 as seed ortholog is 100%.
Bootstrap support for F1SST9 as seed ortholog is 100%.

Group of orthologs #242. Best score 976 bits
Score difference with first non-orthologous sequence - C.intestinalis:808 S.scrofa:321

F7B875              	100.00%		F1S519              	100.00%
Bootstrap support for F7B875 as seed ortholog is 100%.
Bootstrap support for F1S519 as seed ortholog is 100%.

Group of orthologs #243. Best score 975 bits
Score difference with first non-orthologous sequence - C.intestinalis:975 S.scrofa:975

F6YTY3              	100.00%		F1RFG5              	100.00%
Bootstrap support for F6YTY3 as seed ortholog is 100%.
Bootstrap support for F1RFG5 as seed ortholog is 100%.

Group of orthologs #244. Best score 973 bits
Score difference with first non-orthologous sequence - C.intestinalis:973 S.scrofa:558

F6W446              	100.00%		I3LTD6              	100.00%
                    	       		F1RFK1              	37.57%
Bootstrap support for F6W446 as seed ortholog is 100%.
Bootstrap support for I3LTD6 as seed ortholog is 100%.

Group of orthologs #245. Best score 971 bits
Score difference with first non-orthologous sequence - C.intestinalis:754 S.scrofa:971

F6TV75              	100.00%		F1RIY2              	100.00%
                    	       		Q9GKE7              	28.05%
Bootstrap support for F6TV75 as seed ortholog is 100%.
Bootstrap support for F1RIY2 as seed ortholog is 100%.

Group of orthologs #246. Best score 969 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 S.scrofa:779

F6RMY0              	100.00%		F1SS52              	100.00%
Bootstrap support for F6RMY0 as seed ortholog is 100%.
Bootstrap support for F1SS52 as seed ortholog is 100%.

Group of orthologs #247. Best score 967 bits
Score difference with first non-orthologous sequence - C.intestinalis:852 S.scrofa:454

F6SH99              	100.00%		I3LMC6              	100.00%
                    	       		F1SM58              	6.74%
Bootstrap support for F6SH99 as seed ortholog is 100%.
Bootstrap support for I3LMC6 as seed ortholog is 100%.

Group of orthologs #248. Best score 967 bits
Score difference with first non-orthologous sequence - C.intestinalis:967 S.scrofa:820

H2XN51              	100.00%		F1SMP5              	100.00%
Bootstrap support for H2XN51 as seed ortholog is 100%.
Bootstrap support for F1SMP5 as seed ortholog is 100%.

Group of orthologs #249. Best score 965 bits
Score difference with first non-orthologous sequence - C.intestinalis:697 S.scrofa:965

F7AJ84              	100.00%		P79403              	100.00%
Bootstrap support for F7AJ84 as seed ortholog is 100%.
Bootstrap support for P79403 as seed ortholog is 100%.

Group of orthologs #250. Best score 962 bits
Score difference with first non-orthologous sequence - C.intestinalis:962 S.scrofa:96

F6VC80              	100.00%		F1SPM6              	100.00%
Bootstrap support for F6VC80 as seed ortholog is 100%.
Bootstrap support for F1SPM6 as seed ortholog is 99%.

Group of orthologs #251. Best score 961 bits
Score difference with first non-orthologous sequence - C.intestinalis:961 S.scrofa:961

H2XSA8              	100.00%		F1RS81              	100.00%
                    	       		F1SN09              	30.60%
                    	       		F1SLZ6              	23.46%
Bootstrap support for H2XSA8 as seed ortholog is 100%.
Bootstrap support for F1RS81 as seed ortholog is 100%.

Group of orthologs #252. Best score 960 bits
Score difference with first non-orthologous sequence - C.intestinalis:729 S.scrofa:485

H2Y3E7              	100.00%		F1S3V8              	100.00%
Bootstrap support for H2Y3E7 as seed ortholog is 100%.
Bootstrap support for F1S3V8 as seed ortholog is 100%.

Group of orthologs #253. Best score 959 bits
Score difference with first non-orthologous sequence - C.intestinalis:959 S.scrofa:565

F6TNP4              	100.00%		F1SLP8              	100.00%
                    	       		F1SJ86              	5.60%
Bootstrap support for F6TNP4 as seed ortholog is 100%.
Bootstrap support for F1SLP8 as seed ortholog is 100%.

Group of orthologs #254. Best score 959 bits
Score difference with first non-orthologous sequence - C.intestinalis:959 S.scrofa:959

H2XWK5              	100.00%		F1RM40              	100.00%
Bootstrap support for H2XWK5 as seed ortholog is 100%.
Bootstrap support for F1RM40 as seed ortholog is 100%.

Group of orthologs #255. Best score 955 bits
Score difference with first non-orthologous sequence - C.intestinalis:955 S.scrofa:955

F6U441              	100.00%		F1S5N9              	100.00%
Bootstrap support for F6U441 as seed ortholog is 100%.
Bootstrap support for F1S5N9 as seed ortholog is 100%.

Group of orthologs #256. Best score 954 bits
Score difference with first non-orthologous sequence - C.intestinalis:954 S.scrofa:954

F6XLA1              	100.00%		I3LMI5              	100.00%
Bootstrap support for F6XLA1 as seed ortholog is 100%.
Bootstrap support for I3LMI5 as seed ortholog is 100%.

Group of orthologs #257. Best score 952 bits
Score difference with first non-orthologous sequence - C.intestinalis:952 S.scrofa:952

F6TWU9              	100.00%		F1RUV5              	100.00%
Bootstrap support for F6TWU9 as seed ortholog is 100%.
Bootstrap support for F1RUV5 as seed ortholog is 100%.

Group of orthologs #258. Best score 948 bits
Score difference with first non-orthologous sequence - C.intestinalis:827 S.scrofa:812

F6W785              	100.00%		I3LKR1              	100.00%
Bootstrap support for F6W785 as seed ortholog is 100%.
Bootstrap support for I3LKR1 as seed ortholog is 100%.

Group of orthologs #259. Best score 946 bits
Score difference with first non-orthologous sequence - C.intestinalis:946 S.scrofa:761

F6XUP6              	100.00%		F1RGA2              	100.00%
                    	       		I3L9B3              	7.17%
Bootstrap support for F6XUP6 as seed ortholog is 100%.
Bootstrap support for F1RGA2 as seed ortholog is 100%.

Group of orthologs #260. Best score 942 bits
Score difference with first non-orthologous sequence - C.intestinalis:942 S.scrofa:942

F6UWK1              	100.00%		F1RZZ1              	100.00%
Bootstrap support for F6UWK1 as seed ortholog is 100%.
Bootstrap support for F1RZZ1 as seed ortholog is 100%.

Group of orthologs #261. Best score 940 bits
Score difference with first non-orthologous sequence - C.intestinalis:940 S.scrofa:591

F6YNJ1              	100.00%		F1RQU2              	100.00%
                    	       		O02705              	66.40%
Bootstrap support for F6YNJ1 as seed ortholog is 100%.
Bootstrap support for F1RQU2 as seed ortholog is 100%.

Group of orthologs #262. Best score 937 bits
Score difference with first non-orthologous sequence - C.intestinalis:937 S.scrofa:937

F6YWF1              	100.00%		D7RA36              	100.00%
                    	       		I3L979              	14.82%
Bootstrap support for F6YWF1 as seed ortholog is 100%.
Bootstrap support for D7RA36 as seed ortholog is 100%.

Group of orthologs #263. Best score 936 bits
Score difference with first non-orthologous sequence - C.intestinalis:936 S.scrofa:936

F6YIU2              	100.00%		F1RVD4              	100.00%
                    	       		F1RWL8              	7.25%
Bootstrap support for F6YIU2 as seed ortholog is 100%.
Bootstrap support for F1RVD4 as seed ortholog is 100%.

Group of orthologs #264. Best score 932 bits
Score difference with first non-orthologous sequence - C.intestinalis:724 S.scrofa:444

F6XPL3              	100.00%		F1RJV1              	100.00%
Bootstrap support for F6XPL3 as seed ortholog is 100%.
Bootstrap support for F1RJV1 as seed ortholog is 100%.

Group of orthologs #265. Best score 928 bits
Score difference with first non-orthologous sequence - C.intestinalis:928 S.scrofa:928

F6RBT7              	100.00%		F1RHI3              	100.00%
Bootstrap support for F6RBT7 as seed ortholog is 100%.
Bootstrap support for F1RHI3 as seed ortholog is 100%.

Group of orthologs #266. Best score 928 bits
Score difference with first non-orthologous sequence - C.intestinalis:743 S.scrofa:928

F6X189              	100.00%		F1SBF9              	100.00%
Bootstrap support for F6X189 as seed ortholog is 100%.
Bootstrap support for F1SBF9 as seed ortholog is 100%.

Group of orthologs #267. Best score 926 bits
Score difference with first non-orthologous sequence - C.intestinalis:926 S.scrofa:926

F6W453              	100.00%		F1RQS5              	100.00%
Bootstrap support for F6W453 as seed ortholog is 100%.
Bootstrap support for F1RQS5 as seed ortholog is 100%.

Group of orthologs #268. Best score 924 bits
Score difference with first non-orthologous sequence - C.intestinalis:924 S.scrofa:924

F6TC91              	100.00%		F1SD90              	100.00%
                    	       		F1SQL1              	23.76%
Bootstrap support for F6TC91 as seed ortholog is 100%.
Bootstrap support for F1SD90 as seed ortholog is 100%.

Group of orthologs #269. Best score 924 bits
Score difference with first non-orthologous sequence - C.intestinalis:924 S.scrofa:924

F7A2X8              	100.00%		I3LP37              	100.00%
Bootstrap support for F7A2X8 as seed ortholog is 100%.
Bootstrap support for I3LP37 as seed ortholog is 100%.

Group of orthologs #270. Best score 922 bits
Score difference with first non-orthologous sequence - C.intestinalis:922 S.scrofa:192

F6V2Z5              	100.00%		F1RRK8              	100.00%
                    	       		I3L6C5              	51.35%
Bootstrap support for F6V2Z5 as seed ortholog is 100%.
Bootstrap support for F1RRK8 as seed ortholog is 99%.

Group of orthologs #271. Best score 920 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 S.scrofa:224

F7AKV1              	100.00%		Q29261              	100.00%
                    	       		I3LI80              	15.30%
Bootstrap support for F7AKV1 as seed ortholog is 100%.
Bootstrap support for Q29261 as seed ortholog is 99%.

Group of orthologs #272. Best score 919 bits
Score difference with first non-orthologous sequence - C.intestinalis:785 S.scrofa:253

F6W6J2              	100.00%		F1SL82              	100.00%
                    	       		F1SL62              	54.22%
Bootstrap support for F6W6J2 as seed ortholog is 100%.
Bootstrap support for F1SL82 as seed ortholog is 99%.

Group of orthologs #273. Best score 919 bits
Score difference with first non-orthologous sequence - C.intestinalis:919 S.scrofa:609

F6X3R5              	100.00%		F1SEY1              	100.00%
Bootstrap support for F6X3R5 as seed ortholog is 100%.
Bootstrap support for F1SEY1 as seed ortholog is 100%.

Group of orthologs #274. Best score 918 bits
Score difference with first non-orthologous sequence - C.intestinalis:759 S.scrofa:797

F6ZH24              	100.00%		I3LGD9              	100.00%
                    	       		I3LMU5              	38.32%
Bootstrap support for F6ZH24 as seed ortholog is 100%.
Bootstrap support for I3LGD9 as seed ortholog is 100%.

Group of orthologs #275. Best score 918 bits
Score difference with first non-orthologous sequence - C.intestinalis:918 S.scrofa:680

F6SSP0              	100.00%		F1S3C7              	100.00%
Bootstrap support for F6SSP0 as seed ortholog is 100%.
Bootstrap support for F1S3C7 as seed ortholog is 100%.

Group of orthologs #276. Best score 918 bits
Score difference with first non-orthologous sequence - C.intestinalis:812 S.scrofa:764

F7B0S6              	100.00%		F1S4Y0              	100.00%
Bootstrap support for F7B0S6 as seed ortholog is 100%.
Bootstrap support for F1S4Y0 as seed ortholog is 100%.

Group of orthologs #277. Best score 918 bits
Score difference with first non-orthologous sequence - C.intestinalis:918 S.scrofa:918

H2XXY3              	100.00%		F1S9J9              	100.00%
Bootstrap support for H2XXY3 as seed ortholog is 100%.
Bootstrap support for F1S9J9 as seed ortholog is 100%.

Group of orthologs #278. Best score 918 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 S.scrofa:2

F6SJ24              	100.00%		Q2XVP4              	100.00%
Bootstrap support for F6SJ24 as seed ortholog is 99%.
Bootstrap support for Q2XVP4 as seed ortholog is 92%.

Group of orthologs #279. Best score 916 bits
Score difference with first non-orthologous sequence - C.intestinalis:916 S.scrofa:654

F7AJJ9              	100.00%		F1S2Z2              	100.00%
                    	       		F1STL3              	39.84%
Bootstrap support for F7AJJ9 as seed ortholog is 100%.
Bootstrap support for F1S2Z2 as seed ortholog is 100%.

Group of orthologs #280. Best score 913 bits
Score difference with first non-orthologous sequence - C.intestinalis:913 S.scrofa:913

F6ZBB5              	100.00%		F1RPU0              	100.00%
Bootstrap support for F6ZBB5 as seed ortholog is 100%.
Bootstrap support for F1RPU0 as seed ortholog is 100%.

Group of orthologs #281. Best score 913 bits
Score difference with first non-orthologous sequence - C.intestinalis:913 S.scrofa:913

F7B997              	100.00%		F1SFG7              	100.00%
Bootstrap support for F7B997 as seed ortholog is 100%.
Bootstrap support for F1SFG7 as seed ortholog is 100%.

Group of orthologs #282. Best score 910 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.scrofa:9

F6QB29              	100.00%		F1RK98              	100.00%
F7B0Q2              	100.00%		
Bootstrap support for F6QB29 as seed ortholog is 94%.
Bootstrap support for F7B0Q2 as seed ortholog is 93%.
Bootstrap support for F1RK98 as seed ortholog is 89%.

Group of orthologs #283. Best score 910 bits
Score difference with first non-orthologous sequence - C.intestinalis:910 S.scrofa:910

F6QB99              	100.00%		F1RW89              	100.00%
                    	       		P55931              	98.96%
Bootstrap support for F6QB99 as seed ortholog is 100%.
Bootstrap support for F1RW89 as seed ortholog is 100%.

Group of orthologs #284. Best score 909 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.scrofa:245

F6QR95              	100.00%		F1RY15              	100.00%
F6ZVC5              	23.15%		D3K5K5              	35.67%
                    	       		F1STZ5              	25.66%
                    	       		F1STZ2              	22.28%
                    	       		F1RVG1              	20.69%
                    	       		D3K5K6              	15.26%
                    	       		F1SUT8              	7.96%
Bootstrap support for F6QR95 as seed ortholog is 92%.
Bootstrap support for F1RY15 as seed ortholog is 99%.

Group of orthologs #285. Best score 906 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 S.scrofa:536

F6QVH1              	100.00%		Q767K6              	100.00%
Bootstrap support for F6QVH1 as seed ortholog is 100%.
Bootstrap support for Q767K6 as seed ortholog is 100%.

Group of orthologs #286. Best score 905 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 S.scrofa:455

F6SM21              	100.00%		F1S729              	100.00%
Bootstrap support for F6SM21 as seed ortholog is 100%.
Bootstrap support for F1S729 as seed ortholog is 100%.

Group of orthologs #287. Best score 904 bits
Score difference with first non-orthologous sequence - C.intestinalis:904 S.scrofa:904

F6SXA9              	100.00%		F1SK24              	100.00%
Bootstrap support for F6SXA9 as seed ortholog is 100%.
Bootstrap support for F1SK24 as seed ortholog is 100%.

Group of orthologs #288. Best score 901 bits
Score difference with first non-orthologous sequence - C.intestinalis:901 S.scrofa:901

F6SC38              	100.00%		F1SNF2              	100.00%
Bootstrap support for F6SC38 as seed ortholog is 100%.
Bootstrap support for F1SNF2 as seed ortholog is 100%.

Group of orthologs #289. Best score 900 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 S.scrofa:9

L7N0T3              	100.00%		F2Z571              	100.00%
F6SYL0              	30.77%		
Bootstrap support for L7N0T3 as seed ortholog is 100%.
Bootstrap support for F2Z571 as seed ortholog is 96%.

Group of orthologs #290. Best score 899 bits
Score difference with first non-orthologous sequence - C.intestinalis:899 S.scrofa:584

F6RHH3              	100.00%		F1S129              	100.00%
                    	       		F1RHC7              	20.40%
Bootstrap support for F6RHH3 as seed ortholog is 100%.
Bootstrap support for F1S129 as seed ortholog is 100%.

Group of orthologs #291. Best score 899 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 S.scrofa:455

Q1RL48              	100.00%		I3LLV6              	100.00%
Bootstrap support for Q1RL48 as seed ortholog is 100%.
Bootstrap support for I3LLV6 as seed ortholog is 100%.

Group of orthologs #292. Best score 897 bits
Score difference with first non-orthologous sequence - C.intestinalis:897 S.scrofa:897

F6T8P3              	100.00%		F1S9K5              	100.00%
Bootstrap support for F6T8P3 as seed ortholog is 100%.
Bootstrap support for F1S9K5 as seed ortholog is 100%.

Group of orthologs #293. Best score 893 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 S.scrofa:433

H2XL55              	100.00%		F1RHF7              	100.00%
Bootstrap support for H2XL55 as seed ortholog is 100%.
Bootstrap support for F1RHF7 as seed ortholog is 100%.

Group of orthologs #294. Best score 893 bits
Score difference with first non-orthologous sequence - C.intestinalis:893 S.scrofa:893

F6X2V0              	100.00%		F1SFW4              	100.00%
Bootstrap support for F6X2V0 as seed ortholog is 100%.
Bootstrap support for F1SFW4 as seed ortholog is 100%.

Group of orthologs #295. Best score 889 bits
Score difference with first non-orthologous sequence - C.intestinalis:560 S.scrofa:568

F6THL0              	100.00%		F1RSE7              	100.00%
Bootstrap support for F6THL0 as seed ortholog is 100%.
Bootstrap support for F1RSE7 as seed ortholog is 100%.

Group of orthologs #296. Best score 889 bits
Score difference with first non-orthologous sequence - C.intestinalis:889 S.scrofa:106

F6V6N1              	100.00%		F1RW49              	100.00%
Bootstrap support for F6V6N1 as seed ortholog is 100%.
Bootstrap support for F1RW49 as seed ortholog is 95%.

Group of orthologs #297. Best score 888 bits
Score difference with first non-orthologous sequence - C.intestinalis:888 S.scrofa:888

F6TA53              	100.00%		F1S0T7              	100.00%
Bootstrap support for F6TA53 as seed ortholog is 100%.
Bootstrap support for F1S0T7 as seed ortholog is 100%.

Group of orthologs #298. Best score 888 bits
Score difference with first non-orthologous sequence - C.intestinalis:888 S.scrofa:888

F6Q0D8              	100.00%		F1SJS4              	100.00%
Bootstrap support for F6Q0D8 as seed ortholog is 100%.
Bootstrap support for F1SJS4 as seed ortholog is 100%.

Group of orthologs #299. Best score 886 bits
Score difference with first non-orthologous sequence - C.intestinalis:886 S.scrofa:886

F6R854              	100.00%		F1SR18              	100.00%
Bootstrap support for F6R854 as seed ortholog is 100%.
Bootstrap support for F1SR18 as seed ortholog is 100%.

Group of orthologs #300. Best score 886 bits
Score difference with first non-orthologous sequence - C.intestinalis:739 S.scrofa:282

F6W8K8              	100.00%		F1SCS1              	100.00%
Bootstrap support for F6W8K8 as seed ortholog is 100%.
Bootstrap support for F1SCS1 as seed ortholog is 100%.

Group of orthologs #301. Best score 884 bits
Score difference with first non-orthologous sequence - C.intestinalis:884 S.scrofa:820

F6Z3U3              	100.00%		F1SNE9              	100.00%
Bootstrap support for F6Z3U3 as seed ortholog is 100%.
Bootstrap support for F1SNE9 as seed ortholog is 100%.

Group of orthologs #302. Best score 882 bits
Score difference with first non-orthologous sequence - C.intestinalis:882 S.scrofa:882

F6TBG7              	100.00%		F1RG15              	100.00%
Bootstrap support for F6TBG7 as seed ortholog is 100%.
Bootstrap support for F1RG15 as seed ortholog is 100%.

Group of orthologs #303. Best score 876 bits
Score difference with first non-orthologous sequence - C.intestinalis:639 S.scrofa:577

F7A1V5              	100.00%		I3LNN1              	100.00%
Bootstrap support for F7A1V5 as seed ortholog is 100%.
Bootstrap support for I3LNN1 as seed ortholog is 100%.

Group of orthologs #304. Best score 874 bits
Score difference with first non-orthologous sequence - C.intestinalis:874 S.scrofa:874

F6ZZZ6              	100.00%		F1S098              	100.00%
Bootstrap support for F6ZZZ6 as seed ortholog is 100%.
Bootstrap support for F1S098 as seed ortholog is 100%.

Group of orthologs #305. Best score 874 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:537

F7AAM4              	100.00%		F1S0R9              	100.00%
Bootstrap support for F7AAM4 as seed ortholog is 99%.
Bootstrap support for F1S0R9 as seed ortholog is 100%.

Group of orthologs #306. Best score 873 bits
Score difference with first non-orthologous sequence - C.intestinalis:506 S.scrofa:466

F6R6G1              	100.00%		F1SAI6              	100.00%
                    	       		Q29121              	98.27%
Bootstrap support for F6R6G1 as seed ortholog is 100%.
Bootstrap support for F1SAI6 as seed ortholog is 100%.

Group of orthologs #307. Best score 872 bits
Score difference with first non-orthologous sequence - C.intestinalis:872 S.scrofa:872

F6ZZF2              	100.00%		C5I4T6              	100.00%
                    	       		A5GFS4              	14.78%
Bootstrap support for F6ZZF2 as seed ortholog is 100%.
Bootstrap support for C5I4T6 as seed ortholog is 100%.

Group of orthologs #308. Best score 871 bits
Score difference with first non-orthologous sequence - C.intestinalis:871 S.scrofa:871

H2Y100              	100.00%		F1RT12              	100.00%
Bootstrap support for H2Y100 as seed ortholog is 100%.
Bootstrap support for F1RT12 as seed ortholog is 100%.

Group of orthologs #309. Best score 870 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 S.scrofa:870

F7AED7              	100.00%		F1RF80              	100.00%
Bootstrap support for F7AED7 as seed ortholog is 100%.
Bootstrap support for F1RF80 as seed ortholog is 100%.

Group of orthologs #310. Best score 868 bits
Score difference with first non-orthologous sequence - C.intestinalis:800 S.scrofa:471

F6SBG8              	100.00%		F1SLU6              	100.00%
Bootstrap support for F6SBG8 as seed ortholog is 100%.
Bootstrap support for F1SLU6 as seed ortholog is 100%.

Group of orthologs #311. Best score 868 bits
Score difference with first non-orthologous sequence - C.intestinalis:868 S.scrofa:868

F6UKC4              	100.00%		I3LKJ6              	100.00%
Bootstrap support for F6UKC4 as seed ortholog is 100%.
Bootstrap support for I3LKJ6 as seed ortholog is 100%.

Group of orthologs #312. Best score 867 bits
Score difference with first non-orthologous sequence - C.intestinalis:867 S.scrofa:867

F6Q9P9              	100.00%		F1SII4              	100.00%
Bootstrap support for F6Q9P9 as seed ortholog is 100%.
Bootstrap support for F1SII4 as seed ortholog is 100%.

Group of orthologs #313. Best score 866 bits
Score difference with first non-orthologous sequence - C.intestinalis:866 S.scrofa:757

F6UDW5              	100.00%		F1RN84              	100.00%
                    	       		F1RKG9              	47.60%
                    	       		I3LK42              	23.25%
Bootstrap support for F6UDW5 as seed ortholog is 100%.
Bootstrap support for F1RN84 as seed ortholog is 100%.

Group of orthologs #314. Best score 864 bits
Score difference with first non-orthologous sequence - C.intestinalis:864 S.scrofa:148

F6Z7N3              	100.00%		F1RZU3              	100.00%
Bootstrap support for F6Z7N3 as seed ortholog is 100%.
Bootstrap support for F1RZU3 as seed ortholog is 99%.

Group of orthologs #315. Best score 864 bits
Score difference with first non-orthologous sequence - C.intestinalis:864 S.scrofa:864

F6SM85              	100.00%		F1SMQ0              	100.00%
Bootstrap support for F6SM85 as seed ortholog is 100%.
Bootstrap support for F1SMQ0 as seed ortholog is 100%.

Group of orthologs #316. Best score 863 bits
Score difference with first non-orthologous sequence - C.intestinalis:863 S.scrofa:735

F6WIG7              	100.00%		F2Z5D8              	100.00%
Bootstrap support for F6WIG7 as seed ortholog is 100%.
Bootstrap support for F2Z5D8 as seed ortholog is 100%.

Group of orthologs #317. Best score 861 bits
Score difference with first non-orthologous sequence - C.intestinalis:574 S.scrofa:861

F6VRU1              	100.00%		Q29554              	100.00%
Bootstrap support for F6VRU1 as seed ortholog is 100%.
Bootstrap support for Q29554 as seed ortholog is 100%.

Group of orthologs #318. Best score 859 bits
Score difference with first non-orthologous sequence - C.intestinalis:859 S.scrofa:665

F6V8A8              	100.00%		F1S4P5              	100.00%
                    	       		I3L9Z3              	24.51%
Bootstrap support for F6V8A8 as seed ortholog is 100%.
Bootstrap support for F1S4P5 as seed ortholog is 100%.

Group of orthologs #319. Best score 859 bits
Score difference with first non-orthologous sequence - C.intestinalis:740 S.scrofa:753

F6WUJ1              	100.00%		F2Z5G2              	100.00%
Bootstrap support for F6WUJ1 as seed ortholog is 100%.
Bootstrap support for F2Z5G2 as seed ortholog is 100%.

Group of orthologs #320. Best score 859 bits
Score difference with first non-orthologous sequence - C.intestinalis:859 S.scrofa:859

F6Q2H6              	100.00%		I3LPL7              	100.00%
Bootstrap support for F6Q2H6 as seed ortholog is 100%.
Bootstrap support for I3LPL7 as seed ortholog is 100%.

Group of orthologs #321. Best score 858 bits
Score difference with first non-orthologous sequence - C.intestinalis:858 S.scrofa:858

F6T957              	100.00%		P54612              	100.00%
                    	       		P54613              	55.67%
Bootstrap support for F6T957 as seed ortholog is 100%.
Bootstrap support for P54612 as seed ortholog is 100%.

Group of orthologs #322. Best score 855 bits
Score difference with first non-orthologous sequence - C.intestinalis:855 S.scrofa:855

F6YHN3              	100.00%		F1S1T9              	100.00%
Bootstrap support for F6YHN3 as seed ortholog is 100%.
Bootstrap support for F1S1T9 as seed ortholog is 100%.

Group of orthologs #323. Best score 854 bits
Score difference with first non-orthologous sequence - C.intestinalis:854 S.scrofa:854

F6YQL6              	100.00%		F2Z5V0              	100.00%
Bootstrap support for F6YQL6 as seed ortholog is 100%.
Bootstrap support for F2Z5V0 as seed ortholog is 100%.

Group of orthologs #324. Best score 853 bits
Score difference with first non-orthologous sequence - C.intestinalis:853 S.scrofa:853

F6RNR5              	100.00%		F1SCJ2              	100.00%
Bootstrap support for F6RNR5 as seed ortholog is 100%.
Bootstrap support for F1SCJ2 as seed ortholog is 100%.

Group of orthologs #325. Best score 851 bits
Score difference with first non-orthologous sequence - C.intestinalis:728 S.scrofa:851

F6ZWA3              	100.00%		I3LLI7              	100.00%
Bootstrap support for F6ZWA3 as seed ortholog is 100%.
Bootstrap support for I3LLI7 as seed ortholog is 100%.

Group of orthologs #326. Best score 850 bits
Score difference with first non-orthologous sequence - C.intestinalis:850 S.scrofa:725

F6QZB5              	100.00%		F1RJE8              	100.00%
Bootstrap support for F6QZB5 as seed ortholog is 100%.
Bootstrap support for F1RJE8 as seed ortholog is 100%.

Group of orthologs #327. Best score 849 bits
Score difference with first non-orthologous sequence - C.intestinalis:849 S.scrofa:849

H2XVP1              	100.00%		F1SKE6              	100.00%
Bootstrap support for H2XVP1 as seed ortholog is 100%.
Bootstrap support for F1SKE6 as seed ortholog is 100%.

Group of orthologs #328. Best score 848 bits
Score difference with first non-orthologous sequence - C.intestinalis:848 S.scrofa:848

F6T2D0              	100.00%		F1S221              	100.00%
Bootstrap support for F6T2D0 as seed ortholog is 100%.
Bootstrap support for F1S221 as seed ortholog is 100%.

Group of orthologs #329. Best score 848 bits
Score difference with first non-orthologous sequence - C.intestinalis:848 S.scrofa:848

F6TRN8              	100.00%		F1SN95              	100.00%
Bootstrap support for F6TRN8 as seed ortholog is 100%.
Bootstrap support for F1SN95 as seed ortholog is 100%.

Group of orthologs #330. Best score 847 bits
Score difference with first non-orthologous sequence - C.intestinalis:847 S.scrofa:558

H2Y2C6              	100.00%		F1RMJ9              	100.00%
                    	       		F1RPE0              	12.56%
Bootstrap support for H2Y2C6 as seed ortholog is 100%.
Bootstrap support for F1RMJ9 as seed ortholog is 100%.

Group of orthologs #331. Best score 847 bits
Score difference with first non-orthologous sequence - C.intestinalis:847 S.scrofa:214

F6XQ16              	100.00%		F1RNJ0              	100.00%
Bootstrap support for F6XQ16 as seed ortholog is 100%.
Bootstrap support for F1RNJ0 as seed ortholog is 99%.

Group of orthologs #332. Best score 846 bits
Score difference with first non-orthologous sequence - C.intestinalis:846 S.scrofa:340

F6WF19              	100.00%		I3LI20              	100.00%
Bootstrap support for F6WF19 as seed ortholog is 100%.
Bootstrap support for I3LI20 as seed ortholog is 100%.

Group of orthologs #333. Best score 844 bits
Score difference with first non-orthologous sequence - C.intestinalis:844 S.scrofa:772

F7B690              	100.00%		F1SNT8              	100.00%
Bootstrap support for F7B690 as seed ortholog is 100%.
Bootstrap support for F1SNT8 as seed ortholog is 100%.

Group of orthologs #334. Best score 842 bits
Score difference with first non-orthologous sequence - C.intestinalis:552 S.scrofa:708

F7B8G8              	100.00%		F1SLF6              	100.00%
Bootstrap support for F7B8G8 as seed ortholog is 100%.
Bootstrap support for F1SLF6 as seed ortholog is 100%.

Group of orthologs #335. Best score 841 bits
Score difference with first non-orthologous sequence - C.intestinalis:841 S.scrofa:255

F6V5U6              	100.00%		F1SF78              	100.00%
Bootstrap support for F6V5U6 as seed ortholog is 100%.
Bootstrap support for F1SF78 as seed ortholog is 100%.

Group of orthologs #336. Best score 840 bits
Score difference with first non-orthologous sequence - C.intestinalis:840 S.scrofa:840

F7AFG0              	100.00%		I3LCF5              	100.00%
Bootstrap support for F7AFG0 as seed ortholog is 100%.
Bootstrap support for I3LCF5 as seed ortholog is 100%.

Group of orthologs #337. Best score 839 bits
Score difference with first non-orthologous sequence - C.intestinalis:731 S.scrofa:72

F7A8C2              	100.00%		F1RMZ8              	100.00%
Bootstrap support for F7A8C2 as seed ortholog is 100%.
Bootstrap support for F1RMZ8 as seed ortholog is 99%.

Group of orthologs #338. Best score 837 bits
Score difference with first non-orthologous sequence - C.intestinalis:837 S.scrofa:837

F6ZZJ8              	100.00%		I3LBB2              	100.00%
Bootstrap support for F6ZZJ8 as seed ortholog is 100%.
Bootstrap support for I3LBB2 as seed ortholog is 100%.

Group of orthologs #339. Best score 835 bits
Score difference with first non-orthologous sequence - C.intestinalis:835 S.scrofa:835

H2XUH7              	100.00%		F1S7K1              	100.00%
Bootstrap support for H2XUH7 as seed ortholog is 100%.
Bootstrap support for F1S7K1 as seed ortholog is 100%.

Group of orthologs #340. Best score 834 bits
Score difference with first non-orthologous sequence - C.intestinalis:834 S.scrofa:653

F6YRI1              	100.00%		F1SHQ1              	100.00%
                    	       		F1S2A1              	16.44%
Bootstrap support for F6YRI1 as seed ortholog is 100%.
Bootstrap support for F1SHQ1 as seed ortholog is 100%.

Group of orthologs #341. Best score 832 bits
Score difference with first non-orthologous sequence - C.intestinalis:832 S.scrofa:511

H2XXZ3              	100.00%		F1SDX0              	100.00%
Bootstrap support for H2XXZ3 as seed ortholog is 100%.
Bootstrap support for F1SDX0 as seed ortholog is 100%.

Group of orthologs #342. Best score 831 bits
Score difference with first non-orthologous sequence - C.intestinalis:831 S.scrofa:380

F6PPP8              	100.00%		F1SM37              	100.00%
Bootstrap support for F6PPP8 as seed ortholog is 100%.
Bootstrap support for F1SM37 as seed ortholog is 100%.

Group of orthologs #343. Best score 829 bits
Score difference with first non-orthologous sequence - C.intestinalis:829 S.scrofa:829

F6SI53              	100.00%		Q0QF01              	100.00%
                    	       		I3LS54              	57.06%
Bootstrap support for F6SI53 as seed ortholog is 100%.
Bootstrap support for Q0QF01 as seed ortholog is 100%.

Group of orthologs #344. Best score 829 bits
Score difference with first non-orthologous sequence - C.intestinalis:829 S.scrofa:829

F6R2U8              	100.00%		F1RYP5              	100.00%
Bootstrap support for F6R2U8 as seed ortholog is 100%.
Bootstrap support for F1RYP5 as seed ortholog is 100%.

Group of orthologs #345. Best score 829 bits
Score difference with first non-orthologous sequence - C.intestinalis:686 S.scrofa:829

F6THC9              	100.00%		P79384              	100.00%
Bootstrap support for F6THC9 as seed ortholog is 100%.
Bootstrap support for P79384 as seed ortholog is 100%.

Group of orthologs #346. Best score 828 bits
Score difference with first non-orthologous sequence - C.intestinalis:828 S.scrofa:583

H2XYB3              	100.00%		F1SR85              	100.00%
Bootstrap support for H2XYB3 as seed ortholog is 100%.
Bootstrap support for F1SR85 as seed ortholog is 100%.

Group of orthologs #347. Best score 827 bits
Score difference with first non-orthologous sequence - C.intestinalis:827 S.scrofa:827

F6WFB4              	100.00%		F1SU40              	100.00%
                    	       		F1S152              	42.54%
Bootstrap support for F6WFB4 as seed ortholog is 100%.
Bootstrap support for F1SU40 as seed ortholog is 100%.

Group of orthologs #348. Best score 827 bits
Score difference with first non-orthologous sequence - C.intestinalis:827 S.scrofa:516

H2Y1I5              	100.00%		F1S374              	100.00%
                    	       		I3LLX2              	18.92%
Bootstrap support for H2Y1I5 as seed ortholog is 100%.
Bootstrap support for F1S374 as seed ortholog is 100%.

Group of orthologs #349. Best score 824 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 S.scrofa:607

F6U113              	100.00%		F1RRA7              	100.00%
                    	       		F1RI15              	29.54%
                    	       		F1RST0              	18.38%
Bootstrap support for F6U113 as seed ortholog is 100%.
Bootstrap support for F1RRA7 as seed ortholog is 100%.

Group of orthologs #350. Best score 824 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 S.scrofa:338

F6WPG2              	100.00%		Q03333              	100.00%
                    	       		F1SBI5              	97.97%
Bootstrap support for F6WPG2 as seed ortholog is 100%.
Bootstrap support for Q03333 as seed ortholog is 100%.

Group of orthologs #351. Best score 824 bits
Score difference with first non-orthologous sequence - C.intestinalis:824 S.scrofa:824

F6Q2U2              	100.00%		F1SFK5              	100.00%
Bootstrap support for F6Q2U2 as seed ortholog is 100%.
Bootstrap support for F1SFK5 as seed ortholog is 100%.

Group of orthologs #352. Best score 824 bits
Score difference with first non-orthologous sequence - C.intestinalis:824 S.scrofa:824

F6YIR9              	100.00%		F1SJ00              	100.00%
Bootstrap support for F6YIR9 as seed ortholog is 100%.
Bootstrap support for F1SJ00 as seed ortholog is 100%.

Group of orthologs #353. Best score 823 bits
Score difference with first non-orthologous sequence - C.intestinalis:823 S.scrofa:823

F6RK88              	100.00%		F1SP27              	100.00%
Bootstrap support for F6RK88 as seed ortholog is 100%.
Bootstrap support for F1SP27 as seed ortholog is 100%.

Group of orthologs #354. Best score 823 bits
Score difference with first non-orthologous sequence - C.intestinalis:823 S.scrofa:823

F6YH93              	100.00%		F1SLB6              	100.00%
Bootstrap support for F6YH93 as seed ortholog is 100%.
Bootstrap support for F1SLB6 as seed ortholog is 100%.

Group of orthologs #355. Best score 823 bits
Score difference with first non-orthologous sequence - C.intestinalis:823 S.scrofa:383

F6T1J8              	100.00%		P04175              	100.00%
Bootstrap support for F6T1J8 as seed ortholog is 100%.
Bootstrap support for P04175 as seed ortholog is 100%.

Group of orthologs #356. Best score 821 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.scrofa:373

F6YV05              	100.00%		F1STB3              	100.00%
F6SW71              	24.30%		F1SFW3              	19.89%
Bootstrap support for F6YV05 as seed ortholog is 99%.
Bootstrap support for F1STB3 as seed ortholog is 100%.

Group of orthologs #357. Best score 821 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 S.scrofa:680

H2XVY7              	100.00%		F1SB63              	100.00%
Bootstrap support for H2XVY7 as seed ortholog is 100%.
Bootstrap support for F1SB63 as seed ortholog is 100%.

Group of orthologs #358. Best score 821 bits
Score difference with first non-orthologous sequence - C.intestinalis:648 S.scrofa:602

Q86SD3              	100.00%		F1S8U2              	100.00%
Bootstrap support for Q86SD3 as seed ortholog is 100%.
Bootstrap support for F1S8U2 as seed ortholog is 100%.

Group of orthologs #359. Best score 821 bits
Score difference with first non-orthologous sequence - C.intestinalis:821 S.scrofa:821

H2XRC8              	100.00%		F1SU68              	100.00%
Bootstrap support for H2XRC8 as seed ortholog is 100%.
Bootstrap support for F1SU68 as seed ortholog is 100%.

Group of orthologs #360. Best score 820 bits
Score difference with first non-orthologous sequence - C.intestinalis:820 S.scrofa:820

F6XTJ3              	100.00%		I3LJI6              	100.00%
                    	       		I3LJ02              	78.12%
Bootstrap support for F6XTJ3 as seed ortholog is 100%.
Bootstrap support for I3LJI6 as seed ortholog is 100%.

Group of orthologs #361. Best score 820 bits
Score difference with first non-orthologous sequence - C.intestinalis:708 S.scrofa:638

H2XYN5              	100.00%		F1SAS2              	100.00%
Bootstrap support for H2XYN5 as seed ortholog is 100%.
Bootstrap support for F1SAS2 as seed ortholog is 100%.

Group of orthologs #362. Best score 819 bits
Score difference with first non-orthologous sequence - C.intestinalis:819 S.scrofa:663

F6TLJ7              	100.00%		F1RP01              	100.00%
Bootstrap support for F6TLJ7 as seed ortholog is 100%.
Bootstrap support for F1RP01 as seed ortholog is 100%.

Group of orthologs #363. Best score 817 bits
Score difference with first non-orthologous sequence - C.intestinalis:817 S.scrofa:817

F6ZQ20              	100.00%		I3LGU4              	100.00%
                    	       		F1SD76              	36.13%
Bootstrap support for F6ZQ20 as seed ortholog is 100%.
Bootstrap support for I3LGU4 as seed ortholog is 100%.

Group of orthologs #364. Best score 817 bits
Score difference with first non-orthologous sequence - C.intestinalis:817 S.scrofa:737

F6SGI6              	100.00%		A0FKG7              	100.00%
Bootstrap support for F6SGI6 as seed ortholog is 100%.
Bootstrap support for A0FKG7 as seed ortholog is 100%.

Group of orthologs #365. Best score 817 bits
Score difference with first non-orthologous sequence - C.intestinalis:817 S.scrofa:817

F6PXA9              	100.00%		F1RVE2              	100.00%
Bootstrap support for F6PXA9 as seed ortholog is 100%.
Bootstrap support for F1RVE2 as seed ortholog is 100%.

Group of orthologs #366. Best score 817 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 S.scrofa:817

F7AXK5              	100.00%		F1SH89              	100.00%
Bootstrap support for F7AXK5 as seed ortholog is 100%.
Bootstrap support for F1SH89 as seed ortholog is 100%.

Group of orthologs #367. Best score 816 bits
Score difference with first non-orthologous sequence - C.intestinalis:816 S.scrofa:736

F6XCG6              	100.00%		F1RLI4              	100.00%
Bootstrap support for F6XCG6 as seed ortholog is 100%.
Bootstrap support for F1RLI4 as seed ortholog is 100%.

Group of orthologs #368. Best score 814 bits
Score difference with first non-orthologous sequence - C.intestinalis:814 S.scrofa:814

F6WD89              	100.00%		F1SIJ8              	100.00%
Q4H3F0              	5.43%		F1SIJ5              	69.49%
                    	       		F1SIT6              	57.31%
                    	       		F1SIT5              	43.85%
                    	       		I3LQ74              	25.38%
                    	       		I3LFK9              	22.56%
Bootstrap support for F6WD89 as seed ortholog is 100%.
Bootstrap support for F1SIJ8 as seed ortholog is 100%.

Group of orthologs #369. Best score 814 bits
Score difference with first non-orthologous sequence - C.intestinalis:814 S.scrofa:298

F7B6Z2              	100.00%		F1RIH5              	100.00%
                    	       		I3LQV6              	41.54%
Bootstrap support for F7B6Z2 as seed ortholog is 100%.
Bootstrap support for F1RIH5 as seed ortholog is 99%.

Group of orthologs #370. Best score 814 bits
Score difference with first non-orthologous sequence - C.intestinalis:814 S.scrofa:611

H2XSZ6              	100.00%		F1RRV1              	100.00%
                    	       		F1RPT3              	30.51%
Bootstrap support for H2XSZ6 as seed ortholog is 100%.
Bootstrap support for F1RRV1 as seed ortholog is 100%.

Group of orthologs #371. Best score 814 bits
Score difference with first non-orthologous sequence - C.intestinalis:814 S.scrofa:814

F7ADU2              	100.00%		F1S3S2              	100.00%
Bootstrap support for F7ADU2 as seed ortholog is 100%.
Bootstrap support for F1S3S2 as seed ortholog is 100%.

Group of orthologs #372. Best score 814 bits
Score difference with first non-orthologous sequence - C.intestinalis:814 S.scrofa:814

F6VBU5              	100.00%		F2Z5M9              	100.00%
Bootstrap support for F6VBU5 as seed ortholog is 100%.
Bootstrap support for F2Z5M9 as seed ortholog is 100%.

Group of orthologs #373. Best score 813 bits
Score difference with first non-orthologous sequence - C.intestinalis:715 S.scrofa:419

H2XJU0              	100.00%		I3LS09              	100.00%
Bootstrap support for H2XJU0 as seed ortholog is 100%.
Bootstrap support for I3LS09 as seed ortholog is 100%.

Group of orthologs #374. Best score 811 bits
Score difference with first non-orthologous sequence - C.intestinalis:811 S.scrofa:811

F6QRG3              	100.00%		F1RZY7              	100.00%
Bootstrap support for F6QRG3 as seed ortholog is 100%.
Bootstrap support for F1RZY7 as seed ortholog is 100%.

Group of orthologs #375. Best score 811 bits
Score difference with first non-orthologous sequence - C.intestinalis:533 S.scrofa:149

F6UR44              	100.00%		F1SAH2              	100.00%
Bootstrap support for F6UR44 as seed ortholog is 100%.
Bootstrap support for F1SAH2 as seed ortholog is 99%.

Group of orthologs #376. Best score 810 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.scrofa:810

F7A581              	100.00%		F1RZ82              	100.00%
Bootstrap support for F7A581 as seed ortholog is 98%.
Bootstrap support for F1RZ82 as seed ortholog is 100%.

Group of orthologs #377. Best score 808 bits
Score difference with first non-orthologous sequence - C.intestinalis:808 S.scrofa:808

F6U9S8              	100.00%		F1STB6              	100.00%
Bootstrap support for F6U9S8 as seed ortholog is 100%.
Bootstrap support for F1STB6 as seed ortholog is 100%.

Group of orthologs #378. Best score 807 bits
Score difference with first non-orthologous sequence - C.intestinalis:807 S.scrofa:807

F7A3E4              	100.00%		F1RFA9              	100.00%
                    	       		I3LMJ3              	44.43%
Bootstrap support for F7A3E4 as seed ortholog is 100%.
Bootstrap support for F1RFA9 as seed ortholog is 100%.

Group of orthologs #379. Best score 807 bits
Score difference with first non-orthologous sequence - C.intestinalis:807 S.scrofa:685

F6S1D4              	100.00%		F1SCV1              	100.00%
Bootstrap support for F6S1D4 as seed ortholog is 100%.
Bootstrap support for F1SCV1 as seed ortholog is 100%.

Group of orthologs #380. Best score 806 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 S.scrofa:415

F7A0G1              	100.00%		I3LCQ7              	100.00%
                    	       		F1SI85              	42.07%
Bootstrap support for F7A0G1 as seed ortholog is 100%.
Bootstrap support for I3LCQ7 as seed ortholog is 100%.

Group of orthologs #381. Best score 806 bits
Score difference with first non-orthologous sequence - C.intestinalis:806 S.scrofa:806

F7AT12              	100.00%		I3LEG0              	100.00%
                    	       		I3LPW8              	9.06%
Bootstrap support for F7AT12 as seed ortholog is 100%.
Bootstrap support for I3LEG0 as seed ortholog is 100%.

Group of orthologs #382. Best score 806 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 S.scrofa:162

F6V7V9              	100.00%		A5GFQ9              	100.00%
Bootstrap support for F6V7V9 as seed ortholog is 100%.
Bootstrap support for A5GFQ9 as seed ortholog is 99%.

Group of orthologs #383. Best score 806 bits
Score difference with first non-orthologous sequence - C.intestinalis:806 S.scrofa:806

F7AD97              	100.00%		F1RZT5              	100.00%
Bootstrap support for F7AD97 as seed ortholog is 100%.
Bootstrap support for F1RZT5 as seed ortholog is 100%.

Group of orthologs #384. Best score 805 bits
Score difference with first non-orthologous sequence - C.intestinalis:517 S.scrofa:56

F6PZ06              	100.00%		F1SB53              	100.00%
Bootstrap support for F6PZ06 as seed ortholog is 100%.
Bootstrap support for F1SB53 as seed ortholog is 99%.

Group of orthologs #385. Best score 805 bits
Score difference with first non-orthologous sequence - C.intestinalis:805 S.scrofa:805

F6XJ08              	100.00%		F1S458              	100.00%
Bootstrap support for F6XJ08 as seed ortholog is 100%.
Bootstrap support for F1S458 as seed ortholog is 100%.

Group of orthologs #386. Best score 805 bits
Score difference with first non-orthologous sequence - C.intestinalis:713 S.scrofa:710

F6TGH1              	100.00%		I3LB03              	100.00%
Bootstrap support for F6TGH1 as seed ortholog is 100%.
Bootstrap support for I3LB03 as seed ortholog is 100%.

Group of orthologs #387. Best score 804 bits
Score difference with first non-orthologous sequence - C.intestinalis:804 S.scrofa:516

H2XWN8              	100.00%		F1SUB5              	100.00%
                    	       		I3LAK9              	20.60%
Bootstrap support for H2XWN8 as seed ortholog is 100%.
Bootstrap support for F1SUB5 as seed ortholog is 100%.

Group of orthologs #388. Best score 804 bits
Score difference with first non-orthologous sequence - C.intestinalis:804 S.scrofa:702

F6WV80              	100.00%		F1S5P2              	100.00%
Bootstrap support for F6WV80 as seed ortholog is 100%.
Bootstrap support for F1S5P2 as seed ortholog is 100%.

Group of orthologs #389. Best score 803 bits
Score difference with first non-orthologous sequence - C.intestinalis:803 S.scrofa:264

F6ZM86              	100.00%		F2Z5D0              	100.00%
                    	       		I3LD13              	34.81%
Bootstrap support for F6ZM86 as seed ortholog is 100%.
Bootstrap support for F2Z5D0 as seed ortholog is 100%.

Group of orthologs #390. Best score 801 bits
Score difference with first non-orthologous sequence - C.intestinalis:801 S.scrofa:801

F7APZ8              	100.00%		F1RIP1              	100.00%
                    	       		F1SR04              	37.92%
Bootstrap support for F7APZ8 as seed ortholog is 100%.
Bootstrap support for F1RIP1 as seed ortholog is 100%.

Group of orthologs #391. Best score 801 bits
Score difference with first non-orthologous sequence - C.intestinalis:801 S.scrofa:676

F6Y7R5              	100.00%		F1RUH6              	100.00%
Bootstrap support for F6Y7R5 as seed ortholog is 100%.
Bootstrap support for F1RUH6 as seed ortholog is 100%.

Group of orthologs #392. Best score 799 bits
Score difference with first non-orthologous sequence - C.intestinalis:799 S.scrofa:799

F7B5P4              	100.00%		F1RRD3              	100.00%
                    	       		F1RJ88              	46.57%
Bootstrap support for F7B5P4 as seed ortholog is 100%.
Bootstrap support for F1RRD3 as seed ortholog is 100%.

Group of orthologs #393. Best score 799 bits
Score difference with first non-orthologous sequence - C.intestinalis:731 S.scrofa:266

F6QXC2              	100.00%		K7GSX6              	100.00%
                    	       		F1SGD0              	45.25%
Bootstrap support for F6QXC2 as seed ortholog is 100%.
Bootstrap support for K7GSX6 as seed ortholog is 100%.

Group of orthologs #394. Best score 799 bits
Score difference with first non-orthologous sequence - C.intestinalis:799 S.scrofa:42

F6XL93              	100.00%		I3LJ89              	100.00%
Bootstrap support for F6XL93 as seed ortholog is 100%.
Bootstrap support for I3LJ89 as seed ortholog is 65%.
Alternative seed ortholog is F1RQY6 (42 bits away from this cluster)

Group of orthologs #395. Best score 798 bits
Score difference with first non-orthologous sequence - C.intestinalis:637 S.scrofa:328

H2Y2J7              	100.00%		I3LT38              	100.00%
Bootstrap support for H2Y2J7 as seed ortholog is 100%.
Bootstrap support for I3LT38 as seed ortholog is 99%.

Group of orthologs #396. Best score 797 bits
Score difference with first non-orthologous sequence - C.intestinalis:797 S.scrofa:797

F6W2C6              	100.00%		F1S6H9              	100.00%
                    	       		F1S4J1              	12.52%
Bootstrap support for F6W2C6 as seed ortholog is 100%.
Bootstrap support for F1S6H9 as seed ortholog is 100%.

Group of orthologs #397. Best score 797 bits
Score difference with first non-orthologous sequence - C.intestinalis:577 S.scrofa:665

F7BEF3              	100.00%		D0G0C8              	100.00%
Bootstrap support for F7BEF3 as seed ortholog is 100%.
Bootstrap support for D0G0C8 as seed ortholog is 100%.

Group of orthologs #398. Best score 797 bits
Score difference with first non-orthologous sequence - C.intestinalis:797 S.scrofa:797

F6WAZ5              	100.00%		F1SKT8              	100.00%
Bootstrap support for F6WAZ5 as seed ortholog is 100%.
Bootstrap support for F1SKT8 as seed ortholog is 100%.

Group of orthologs #399. Best score 797 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 S.scrofa:339

F6SLT5              	100.00%		Q95334              	100.00%
Bootstrap support for F6SLT5 as seed ortholog is 99%.
Bootstrap support for Q95334 as seed ortholog is 100%.

Group of orthologs #400. Best score 797 bits
Score difference with first non-orthologous sequence - C.intestinalis:688 S.scrofa:797

H2XQX5              	100.00%		I3LCC2              	100.00%
Bootstrap support for H2XQX5 as seed ortholog is 100%.
Bootstrap support for I3LCC2 as seed ortholog is 100%.

Group of orthologs #401. Best score 796 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 S.scrofa:373

H2XLZ9              	100.00%		F1S8A4              	100.00%
                    	       		F1SDK4              	18.16%
Bootstrap support for H2XLZ9 as seed ortholog is 100%.
Bootstrap support for F1S8A4 as seed ortholog is 100%.

Group of orthologs #402. Best score 796 bits
Score difference with first non-orthologous sequence - C.intestinalis:796 S.scrofa:551

H2XU69              	100.00%		F1S9V4              	100.00%
Bootstrap support for H2XU69 as seed ortholog is 100%.
Bootstrap support for F1S9V4 as seed ortholog is 100%.

Group of orthologs #403. Best score 796 bits
Score difference with first non-orthologous sequence - C.intestinalis:796 S.scrofa:796

F6XA93              	100.00%		I3LIY9              	100.00%
Bootstrap support for F6XA93 as seed ortholog is 100%.
Bootstrap support for I3LIY9 as seed ortholog is 100%.

Group of orthologs #404. Best score 795 bits
Score difference with first non-orthologous sequence - C.intestinalis:624 S.scrofa:795

F6YEG0              	100.00%		P47788              	100.00%
                    	       		Q02038              	18.41%
Bootstrap support for F6YEG0 as seed ortholog is 100%.
Bootstrap support for P47788 as seed ortholog is 100%.

Group of orthologs #405. Best score 795 bits
Score difference with first non-orthologous sequence - C.intestinalis:795 S.scrofa:795

F7BBN1              	100.00%		F1SCZ4              	100.00%
Bootstrap support for F7BBN1 as seed ortholog is 100%.
Bootstrap support for F1SCZ4 as seed ortholog is 100%.

Group of orthologs #406. Best score 795 bits
Score difference with first non-orthologous sequence - C.intestinalis:602 S.scrofa:51

F6Q5T5              	100.00%		I3LR08              	100.00%
Bootstrap support for F6Q5T5 as seed ortholog is 100%.
Bootstrap support for I3LR08 as seed ortholog is 72%.
Alternative seed ortholog is F1RKT5 (51 bits away from this cluster)

Group of orthologs #407. Best score 794 bits
Score difference with first non-orthologous sequence - C.intestinalis:794 S.scrofa:794

F6UQ90              	100.00%		F1S1X3              	100.00%
Bootstrap support for F6UQ90 as seed ortholog is 100%.
Bootstrap support for F1S1X3 as seed ortholog is 100%.

Group of orthologs #408. Best score 794 bits
Score difference with first non-orthologous sequence - C.intestinalis:794 S.scrofa:168

F7AX97              	100.00%		F1RQR1              	100.00%
Bootstrap support for F7AX97 as seed ortholog is 100%.
Bootstrap support for F1RQR1 as seed ortholog is 99%.

Group of orthologs #409. Best score 793 bits
Score difference with first non-orthologous sequence - C.intestinalis:793 S.scrofa:793

F6WKD5              	100.00%		F1RY71              	100.00%
Bootstrap support for F6WKD5 as seed ortholog is 100%.
Bootstrap support for F1RY71 as seed ortholog is 100%.

Group of orthologs #410. Best score 793 bits
Score difference with first non-orthologous sequence - C.intestinalis:793 S.scrofa:390

F6Z2U1              	100.00%		F1RTL0              	100.00%
Bootstrap support for F6Z2U1 as seed ortholog is 100%.
Bootstrap support for F1RTL0 as seed ortholog is 100%.

Group of orthologs #411. Best score 792 bits
Score difference with first non-orthologous sequence - C.intestinalis:792 S.scrofa:792

F6T0L0              	100.00%		F1RZ70              	100.00%
                    	       		F1RK91              	22.10%
Bootstrap support for F6T0L0 as seed ortholog is 100%.
Bootstrap support for F1RZ70 as seed ortholog is 100%.

Group of orthologs #412. Best score 792 bits
Score difference with first non-orthologous sequence - C.intestinalis:702 S.scrofa:734

F7AXJ1              	100.00%		F1SSL4              	100.00%
Bootstrap support for F7AXJ1 as seed ortholog is 100%.
Bootstrap support for F1SSL4 as seed ortholog is 100%.

Group of orthologs #413. Best score 791 bits
Score difference with first non-orthologous sequence - C.intestinalis:791 S.scrofa:791

F6PKJ4              	100.00%		F1ST49              	100.00%
Bootstrap support for F6PKJ4 as seed ortholog is 100%.
Bootstrap support for F1ST49 as seed ortholog is 100%.

Group of orthologs #414. Best score 791 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 S.scrofa:410

F6YUE7              	100.00%		F1SDW0              	100.00%
Bootstrap support for F6YUE7 as seed ortholog is 100%.
Bootstrap support for F1SDW0 as seed ortholog is 100%.

Group of orthologs #415. Best score 791 bits
Score difference with first non-orthologous sequence - C.intestinalis:791 S.scrofa:429

Q1RL50              	100.00%		F1SA85              	100.00%
Bootstrap support for Q1RL50 as seed ortholog is 100%.
Bootstrap support for F1SA85 as seed ortholog is 100%.

Group of orthologs #416. Best score 789 bits
Score difference with first non-orthologous sequence - C.intestinalis:789 S.scrofa:789

F6UP49              	100.00%		F1RKC0              	100.00%
                    	       		F1REX8              	14.26%
Bootstrap support for F6UP49 as seed ortholog is 100%.
Bootstrap support for F1RKC0 as seed ortholog is 100%.

Group of orthologs #417. Best score 789 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 S.scrofa:358

F6XRF6              	100.00%		F1SNI8              	100.00%
                    	       		F1RU74              	27.29%
Bootstrap support for F6XRF6 as seed ortholog is 100%.
Bootstrap support for F1SNI8 as seed ortholog is 100%.

Group of orthologs #418. Best score 788 bits
Score difference with first non-orthologous sequence - C.intestinalis:788 S.scrofa:788

F6Y1N2              	100.00%		F1RU38              	100.00%
Bootstrap support for F6Y1N2 as seed ortholog is 100%.
Bootstrap support for F1RU38 as seed ortholog is 100%.

Group of orthologs #419. Best score 788 bits
Score difference with first non-orthologous sequence - C.intestinalis:704 S.scrofa:788

F6YXX9              	100.00%		F1SEW2              	100.00%
Bootstrap support for F6YXX9 as seed ortholog is 100%.
Bootstrap support for F1SEW2 as seed ortholog is 100%.

Group of orthologs #420. Best score 787 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 S.scrofa:618

F6RHK8              	100.00%		F1S3H1              	100.00%
Bootstrap support for F6RHK8 as seed ortholog is 100%.
Bootstrap support for F1S3H1 as seed ortholog is 100%.

Group of orthologs #421. Best score 787 bits
Score difference with first non-orthologous sequence - C.intestinalis:625 S.scrofa:171

F6Q5Y8              	100.00%		F1SG89              	100.00%
Bootstrap support for F6Q5Y8 as seed ortholog is 100%.
Bootstrap support for F1SG89 as seed ortholog is 99%.

Group of orthologs #422. Best score 787 bits
Score difference with first non-orthologous sequence - C.intestinalis:733 S.scrofa:159

F6YFY0              	100.00%		I3LUM9              	100.00%
Bootstrap support for F6YFY0 as seed ortholog is 100%.
Bootstrap support for I3LUM9 as seed ortholog is 100%.

Group of orthologs #423. Best score 786 bits
Score difference with first non-orthologous sequence - C.intestinalis:786 S.scrofa:786

F6WTE3              	100.00%		F1SMZ7              	100.00%
Bootstrap support for F6WTE3 as seed ortholog is 100%.
Bootstrap support for F1SMZ7 as seed ortholog is 100%.

Group of orthologs #424. Best score 785 bits
Score difference with first non-orthologous sequence - C.intestinalis:785 S.scrofa:785

F6UET6              	100.00%		F1SC47              	100.00%
Bootstrap support for F6UET6 as seed ortholog is 100%.
Bootstrap support for F1SC47 as seed ortholog is 100%.

Group of orthologs #425. Best score 784 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 S.scrofa:495

H2XQX6              	100.00%		F2Z562              	100.00%
Bootstrap support for H2XQX6 as seed ortholog is 100%.
Bootstrap support for F2Z562 as seed ortholog is 100%.

Group of orthologs #426. Best score 783 bits
Score difference with first non-orthologous sequence - C.intestinalis:783 S.scrofa:399

F7BMY3              	100.00%		Q2QLD7              	100.00%
                    	       		F1SBP7              	14.50%
Bootstrap support for F7BMY3 as seed ortholog is 100%.
Bootstrap support for Q2QLD7 as seed ortholog is 100%.

Group of orthologs #427. Best score 782 bits
Score difference with first non-orthologous sequence - C.intestinalis:782 S.scrofa:782

F7ABS5              	100.00%		F1RNR9              	100.00%
Bootstrap support for F7ABS5 as seed ortholog is 100%.
Bootstrap support for F1RNR9 as seed ortholog is 100%.

Group of orthologs #428. Best score 782 bits
Score difference with first non-orthologous sequence - C.intestinalis:654 S.scrofa:782

H2XL64              	100.00%		F1SCS4              	100.00%
Bootstrap support for H2XL64 as seed ortholog is 100%.
Bootstrap support for F1SCS4 as seed ortholog is 100%.

Group of orthologs #429. Best score 782 bits
Score difference with first non-orthologous sequence - C.intestinalis:782 S.scrofa:782

F6TM52              	100.00%		I3LTC2              	100.00%
Bootstrap support for F6TM52 as seed ortholog is 100%.
Bootstrap support for I3LTC2 as seed ortholog is 100%.

Group of orthologs #430. Best score 781 bits
Score difference with first non-orthologous sequence - C.intestinalis:781 S.scrofa:781

F6WNR2              	100.00%		F1RYU6              	100.00%
Bootstrap support for F6WNR2 as seed ortholog is 100%.
Bootstrap support for F1RYU6 as seed ortholog is 100%.

Group of orthologs #431. Best score 780 bits
Score difference with first non-orthologous sequence - C.intestinalis:780 S.scrofa:780

F7BIS1              	100.00%		F1SSZ9              	100.00%
Bootstrap support for F7BIS1 as seed ortholog is 100%.
Bootstrap support for F1SSZ9 as seed ortholog is 100%.

Group of orthologs #432. Best score 779 bits
Score difference with first non-orthologous sequence - C.intestinalis:779 S.scrofa:718

F6Z7W1              	100.00%		I3LKX6              	100.00%
                    	       		F1RY89              	14.42%
Bootstrap support for F6Z7W1 as seed ortholog is 100%.
Bootstrap support for I3LKX6 as seed ortholog is 100%.

Group of orthologs #433. Best score 779 bits
Score difference with first non-orthologous sequence - C.intestinalis:779 S.scrofa:779

F6RK00              	100.00%		F1RF82              	100.00%
Bootstrap support for F6RK00 as seed ortholog is 100%.
Bootstrap support for F1RF82 as seed ortholog is 100%.

Group of orthologs #434. Best score 779 bits
Score difference with first non-orthologous sequence - C.intestinalis:713 S.scrofa:645

F6W8G0              	100.00%		F1RSY9              	100.00%
Bootstrap support for F6W8G0 as seed ortholog is 100%.
Bootstrap support for F1RSY9 as seed ortholog is 100%.

Group of orthologs #435. Best score 779 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 S.scrofa:210

F6SF88              	100.00%		F1SBL0              	100.00%
Bootstrap support for F6SF88 as seed ortholog is 100%.
Bootstrap support for F1SBL0 as seed ortholog is 99%.

Group of orthologs #436. Best score 777 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 S.scrofa:418

H2XSX9              	100.00%		Q0PY11              	100.00%
                    	       		F1STM4              	35.06%
                    	       		F1STN7              	34.42%
Bootstrap support for H2XSX9 as seed ortholog is 80%.
Bootstrap support for Q0PY11 as seed ortholog is 100%.

Group of orthologs #437. Best score 777 bits
Score difference with first non-orthologous sequence - C.intestinalis:777 S.scrofa:777

F6VCN7              	100.00%		F1S0Q0              	100.00%
                    	       		I3LRW1              	29.13%
Bootstrap support for F6VCN7 as seed ortholog is 100%.
Bootstrap support for F1S0Q0 as seed ortholog is 100%.

Group of orthologs #438. Best score 777 bits
Score difference with first non-orthologous sequence - C.intestinalis:777 S.scrofa:566

F6PMK8              	100.00%		I3LR66              	100.00%
Bootstrap support for F6PMK8 as seed ortholog is 100%.
Bootstrap support for I3LR66 as seed ortholog is 100%.

Group of orthologs #439. Best score 777 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 S.scrofa:596

H2XS20              	100.00%		I3L7B7              	100.00%
Bootstrap support for H2XS20 as seed ortholog is 100%.
Bootstrap support for I3L7B7 as seed ortholog is 100%.

Group of orthologs #440. Best score 776 bits
Score difference with first non-orthologous sequence - C.intestinalis:694 S.scrofa:29

F6Z8I3              	100.00%		I3LV46              	100.00%
Bootstrap support for F6Z8I3 as seed ortholog is 100%.
Bootstrap support for I3LV46 as seed ortholog is 87%.

Group of orthologs #441. Best score 775 bits
Score difference with first non-orthologous sequence - C.intestinalis:775 S.scrofa:498

F6SNC6              	100.00%		F1SMQ4              	100.00%
                    	       		F1S610              	54.85%
Bootstrap support for F6SNC6 as seed ortholog is 100%.
Bootstrap support for F1SMQ4 as seed ortholog is 100%.

Group of orthologs #442. Best score 775 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 S.scrofa:775

F6UTP0              	100.00%		F1RG09              	100.00%
Bootstrap support for F6UTP0 as seed ortholog is 100%.
Bootstrap support for F1RG09 as seed ortholog is 100%.

Group of orthologs #443. Best score 774 bits
Score difference with first non-orthologous sequence - C.intestinalis:774 S.scrofa:210

F7ABV6              	100.00%		K7GQB8              	100.00%
                    	       		I3LAC9              	33.88%
                    	       		F1RTP1              	20.59%
Bootstrap support for F7ABV6 as seed ortholog is 100%.
Bootstrap support for K7GQB8 as seed ortholog is 99%.

Group of orthologs #444. Best score 774 bits
Score difference with first non-orthologous sequence - C.intestinalis:774 S.scrofa:774

F6YXI8              	100.00%		F1RSM4              	100.00%
Bootstrap support for F6YXI8 as seed ortholog is 100%.
Bootstrap support for F1RSM4 as seed ortholog is 100%.

Group of orthologs #445. Best score 774 bits
Score difference with first non-orthologous sequence - C.intestinalis:774 S.scrofa:774

F6TSV6              	100.00%		F2Z5V5              	100.00%
Bootstrap support for F6TSV6 as seed ortholog is 100%.
Bootstrap support for F2Z5V5 as seed ortholog is 100%.

Group of orthologs #446. Best score 773 bits
Score difference with first non-orthologous sequence - C.intestinalis:773 S.scrofa:558

F6RHA1              	100.00%		F1RIP4              	100.00%
Bootstrap support for F6RHA1 as seed ortholog is 100%.
Bootstrap support for F1RIP4 as seed ortholog is 100%.

Group of orthologs #447. Best score 772 bits
Score difference with first non-orthologous sequence - C.intestinalis:665 S.scrofa:617

H2XYB0              	100.00%		F1RYM4              	100.00%
Bootstrap support for H2XYB0 as seed ortholog is 100%.
Bootstrap support for F1RYM4 as seed ortholog is 100%.

Group of orthologs #448. Best score 771 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.scrofa:771

F6XH38              	100.00%		F1RZV7              	100.00%
Bootstrap support for F6XH38 as seed ortholog is 99%.
Bootstrap support for F1RZV7 as seed ortholog is 100%.

Group of orthologs #449. Best score 769 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 S.scrofa:264

F6V5B4              	100.00%		I3LKJ8              	100.00%
F6SGT8              	21.84%		
Bootstrap support for F6V5B4 as seed ortholog is 100%.
Bootstrap support for I3LKJ8 as seed ortholog is 100%.

Group of orthologs #450. Best score 769 bits
Score difference with first non-orthologous sequence - C.intestinalis:769 S.scrofa:769

H2XRD5              	100.00%		I3LD06              	100.00%
                    	       		F1RM07              	22.72%
Bootstrap support for H2XRD5 as seed ortholog is 100%.
Bootstrap support for I3LD06 as seed ortholog is 100%.

Group of orthologs #451. Best score 769 bits
Score difference with first non-orthologous sequence - C.intestinalis:769 S.scrofa:769

F6WWD5              	100.00%		F1RJE4              	100.00%
Bootstrap support for F6WWD5 as seed ortholog is 100%.
Bootstrap support for F1RJE4 as seed ortholog is 100%.

Group of orthologs #452. Best score 768 bits
Score difference with first non-orthologous sequence - C.intestinalis:768 S.scrofa:768

F7B593              	100.00%		F1RMC3              	100.00%
                    	       		F1RRY0              	51.44%
Bootstrap support for F7B593 as seed ortholog is 100%.
Bootstrap support for F1RMC3 as seed ortholog is 100%.

Group of orthologs #453. Best score 768 bits
Score difference with first non-orthologous sequence - C.intestinalis:768 S.scrofa:768

F7A9M5              	100.00%		F1S614              	100.00%
                    	       		F1SMQ5              	42.13%
Bootstrap support for F7A9M5 as seed ortholog is 100%.
Bootstrap support for F1S614 as seed ortholog is 100%.

Group of orthologs #454. Best score 766 bits
Score difference with first non-orthologous sequence - C.intestinalis:766 S.scrofa:345

H2XZE3              	100.00%		F1SHW9              	100.00%
Bootstrap support for H2XZE3 as seed ortholog is 100%.
Bootstrap support for F1SHW9 as seed ortholog is 99%.

Group of orthologs #455. Best score 765 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 S.scrofa:511

F6XSL1              	100.00%		F1SKD5              	100.00%
                    	       		F1SPT0              	26.84%
Bootstrap support for F6XSL1 as seed ortholog is 100%.
Bootstrap support for F1SKD5 as seed ortholog is 100%.

Group of orthologs #456. Best score 764 bits
Score difference with first non-orthologous sequence - C.intestinalis:764 S.scrofa:293

F6SBC7              	100.00%		F1RN43              	100.00%
Bootstrap support for F6SBC7 as seed ortholog is 100%.
Bootstrap support for F1RN43 as seed ortholog is 100%.

Group of orthologs #457. Best score 764 bits
Score difference with first non-orthologous sequence - C.intestinalis:764 S.scrofa:764

F6VEI9              	100.00%		F1S0G3              	100.00%
Bootstrap support for F6VEI9 as seed ortholog is 100%.
Bootstrap support for F1S0G3 as seed ortholog is 100%.

Group of orthologs #458. Best score 764 bits
Score difference with first non-orthologous sequence - C.intestinalis:764 S.scrofa:593

F6R107              	100.00%		F1STX8              	100.00%
Bootstrap support for F6R107 as seed ortholog is 100%.
Bootstrap support for F1STX8 as seed ortholog is 100%.

Group of orthologs #459. Best score 764 bits
Score difference with first non-orthologous sequence - C.intestinalis:660 S.scrofa:648

F6TPR3              	100.00%		F1SLA0              	100.00%
Bootstrap support for F6TPR3 as seed ortholog is 100%.
Bootstrap support for F1SLA0 as seed ortholog is 100%.

Group of orthologs #460. Best score 764 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 S.scrofa:618

F6XMA0              	100.00%		F1SQN1              	100.00%
Bootstrap support for F6XMA0 as seed ortholog is 100%.
Bootstrap support for F1SQN1 as seed ortholog is 100%.

Group of orthologs #461. Best score 764 bits
Score difference with first non-orthologous sequence - C.intestinalis:764 S.scrofa:517

F6UIE4              	100.00%		I3LL07              	100.00%
Bootstrap support for F6UIE4 as seed ortholog is 100%.
Bootstrap support for I3LL07 as seed ortholog is 100%.

Group of orthologs #462. Best score 764 bits
Score difference with first non-orthologous sequence - C.intestinalis:764 S.scrofa:764

H2Y2G2              	100.00%		P26234              	100.00%
Bootstrap support for H2Y2G2 as seed ortholog is 100%.
Bootstrap support for P26234 as seed ortholog is 100%.

Group of orthologs #463. Best score 762 bits
Score difference with first non-orthologous sequence - C.intestinalis:762 S.scrofa:762

F6U2V6              	100.00%		F1SAQ8              	100.00%
Bootstrap support for F6U2V6 as seed ortholog is 100%.
Bootstrap support for F1SAQ8 as seed ortholog is 100%.

Group of orthologs #464. Best score 761 bits
Score difference with first non-orthologous sequence - C.intestinalis:761 S.scrofa:480

H2XPG6              	100.00%		F1RW66              	100.00%
Bootstrap support for H2XPG6 as seed ortholog is 100%.
Bootstrap support for F1RW66 as seed ortholog is 100%.

Group of orthologs #465. Best score 761 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 S.scrofa:461

F6YTL6              	100.00%		F2Z5J1              	100.00%
Bootstrap support for F6YTL6 as seed ortholog is 100%.
Bootstrap support for F2Z5J1 as seed ortholog is 100%.

Group of orthologs #466. Best score 760 bits
Score difference with first non-orthologous sequence - C.intestinalis:617 S.scrofa:760

F6S7U7              	100.00%		F1SEN2              	100.00%
Bootstrap support for F6S7U7 as seed ortholog is 100%.
Bootstrap support for F1SEN2 as seed ortholog is 100%.

Group of orthologs #467. Best score 760 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.scrofa:623

F6PNW9              	100.00%		F1SNT1              	100.00%
Bootstrap support for F6PNW9 as seed ortholog is 94%.
Bootstrap support for F1SNT1 as seed ortholog is 100%.

Group of orthologs #468. Best score 759 bits
Score difference with first non-orthologous sequence - C.intestinalis:759 S.scrofa:759

F6W8M0              	100.00%		F1SGN5              	100.00%
Bootstrap support for F6W8M0 as seed ortholog is 100%.
Bootstrap support for F1SGN5 as seed ortholog is 100%.

Group of orthologs #469. Best score 758 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 S.scrofa:495

F6WI66              	100.00%		I3LDV0              	100.00%
                    	       		F1RX16              	85.36%
Bootstrap support for F6WI66 as seed ortholog is 100%.
Bootstrap support for I3LDV0 as seed ortholog is 100%.

Group of orthologs #470. Best score 758 bits
Score difference with first non-orthologous sequence - C.intestinalis:758 S.scrofa:758

H2XMI6              	100.00%		I3LD80              	100.00%
                    	       		F1RRN3              	24.96%
Bootstrap support for H2XMI6 as seed ortholog is 100%.
Bootstrap support for I3LD80 as seed ortholog is 100%.

Group of orthologs #471. Best score 757 bits
Score difference with first non-orthologous sequence - C.intestinalis:757 S.scrofa:757

F6PST3              	100.00%		F2Z505              	100.00%
Bootstrap support for F6PST3 as seed ortholog is 100%.
Bootstrap support for F2Z505 as seed ortholog is 100%.

Group of orthologs #472. Best score 757 bits
Score difference with first non-orthologous sequence - C.intestinalis:757 S.scrofa:206

F6SNM2              	100.00%		F1SR84              	100.00%
Bootstrap support for F6SNM2 as seed ortholog is 100%.
Bootstrap support for F1SR84 as seed ortholog is 99%.

Group of orthologs #473. Best score 757 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 S.scrofa:594

H2XQ03              	100.00%		F1SAI8              	100.00%
Bootstrap support for H2XQ03 as seed ortholog is 100%.
Bootstrap support for F1SAI8 as seed ortholog is 100%.

Group of orthologs #474. Best score 757 bits
Score difference with first non-orthologous sequence - C.intestinalis:757 S.scrofa:757

F7AQD6              	100.00%		F1SUR6              	100.00%
Bootstrap support for F7AQD6 as seed ortholog is 100%.
Bootstrap support for F1SUR6 as seed ortholog is 100%.

Group of orthologs #475. Best score 757 bits
Score difference with first non-orthologous sequence - C.intestinalis:757 S.scrofa:757

Q8HIM9              	100.00%		O79876              	100.00%
Bootstrap support for Q8HIM9 as seed ortholog is 100%.
Bootstrap support for O79876 as seed ortholog is 100%.

Group of orthologs #476. Best score 756 bits
Score difference with first non-orthologous sequence - C.intestinalis:564 S.scrofa:522

F6ZC49              	100.00%		I3LCA2              	100.00%
Bootstrap support for F6ZC49 as seed ortholog is 100%.
Bootstrap support for I3LCA2 as seed ortholog is 100%.

Group of orthologs #477. Best score 755 bits
Score difference with first non-orthologous sequence - C.intestinalis:637 S.scrofa:755

H2XS37              	100.00%		F1RRK0              	100.00%
Bootstrap support for H2XS37 as seed ortholog is 100%.
Bootstrap support for F1RRK0 as seed ortholog is 100%.

Group of orthologs #478. Best score 754 bits
Score difference with first non-orthologous sequence - C.intestinalis:754 S.scrofa:431

F6YGI4              	100.00%		F1RXW4              	100.00%
                    	       		F1SP08              	12.99%
                    	       		I3LUS3              	8.33%
Bootstrap support for F6YGI4 as seed ortholog is 100%.
Bootstrap support for F1RXW4 as seed ortholog is 100%.

Group of orthologs #479. Best score 754 bits
Score difference with first non-orthologous sequence - C.intestinalis:754 S.scrofa:754

F7AI93              	100.00%		F1RFD3              	100.00%
                    	       		I3LQZ7              	84.62%
Bootstrap support for F7AI93 as seed ortholog is 100%.
Bootstrap support for F1RFD3 as seed ortholog is 100%.

Group of orthologs #480. Best score 753 bits
Score difference with first non-orthologous sequence - C.intestinalis:753 S.scrofa:753

F6VDC4              	100.00%		F1RF76              	100.00%
Bootstrap support for F6VDC4 as seed ortholog is 100%.
Bootstrap support for F1RF76 as seed ortholog is 100%.

Group of orthologs #481. Best score 753 bits
Score difference with first non-orthologous sequence - C.intestinalis:667 S.scrofa:753

F6SPK3              	100.00%		I3LGV6              	100.00%
Bootstrap support for F6SPK3 as seed ortholog is 100%.
Bootstrap support for I3LGV6 as seed ortholog is 100%.

Group of orthologs #482. Best score 752 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.scrofa:9

H2Y3G9              	100.00%		F1SFZ1              	100.00%
                    	       		F1SGY1              	9.85%
Bootstrap support for H2Y3G9 as seed ortholog is 99%.
Bootstrap support for F1SFZ1 as seed ortholog is 56%.
Alternative seed ortholog is F1SFZ6 (9 bits away from this cluster)

Group of orthologs #483. Best score 751 bits
Score difference with first non-orthologous sequence - C.intestinalis:751 S.scrofa:751

Q4H2R2              	100.00%		I3LLA8              	100.00%
F6VQ10              	70.85%		
Bootstrap support for Q4H2R2 as seed ortholog is 100%.
Bootstrap support for I3LLA8 as seed ortholog is 100%.

Group of orthologs #484. Best score 751 bits
Score difference with first non-orthologous sequence - C.intestinalis:751 S.scrofa:751

F6ZDB4              	100.00%		A5GFY4              	100.00%
Bootstrap support for F6ZDB4 as seed ortholog is 100%.
Bootstrap support for A5GFY4 as seed ortholog is 100%.

Group of orthologs #485. Best score 750 bits
Score difference with first non-orthologous sequence - C.intestinalis:750 S.scrofa:638

F7AVY6              	100.00%		Q767L0              	100.00%
                    	       		F1RU94              	69.26%
Bootstrap support for F7AVY6 as seed ortholog is 100%.
Bootstrap support for Q767L0 as seed ortholog is 100%.

Group of orthologs #486. Best score 750 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 S.scrofa:750

F6YFF3              	100.00%		F1SH44              	100.00%
Bootstrap support for F6YFF3 as seed ortholog is 100%.
Bootstrap support for F1SH44 as seed ortholog is 100%.

Group of orthologs #487. Best score 749 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 S.scrofa:182

F6YDI9              	100.00%		F1RZK8              	100.00%
                    	       		I3LG31              	25.00%
Bootstrap support for F6YDI9 as seed ortholog is 100%.
Bootstrap support for F1RZK8 as seed ortholog is 100%.

Group of orthologs #488. Best score 749 bits
Score difference with first non-orthologous sequence - C.intestinalis:749 S.scrofa:703

F6W0C3              	100.00%		F1RFP8              	100.00%
Bootstrap support for F6W0C3 as seed ortholog is 100%.
Bootstrap support for F1RFP8 as seed ortholog is 100%.

Group of orthologs #489. Best score 749 bits
Score difference with first non-orthologous sequence - C.intestinalis:749 S.scrofa:749

F6YAM0              	100.00%		F1RVI7              	100.00%
Bootstrap support for F6YAM0 as seed ortholog is 100%.
Bootstrap support for F1RVI7 as seed ortholog is 100%.

Group of orthologs #490. Best score 749 bits
Score difference with first non-orthologous sequence - C.intestinalis:749 S.scrofa:203

F6X4B8              	100.00%		F1SF87              	100.00%
Bootstrap support for F6X4B8 as seed ortholog is 100%.
Bootstrap support for F1SF87 as seed ortholog is 100%.

Group of orthologs #491. Best score 748 bits
Score difference with first non-orthologous sequence - C.intestinalis:489 S.scrofa:606

F6QX34              	100.00%		I3LR32              	100.00%
Bootstrap support for F6QX34 as seed ortholog is 100%.
Bootstrap support for I3LR32 as seed ortholog is 100%.

Group of orthologs #492. Best score 748 bits
Score difference with first non-orthologous sequence - C.intestinalis:748 S.scrofa:54

F6YZZ7              	100.00%		P20192              	100.00%
Bootstrap support for F6YZZ7 as seed ortholog is 100%.
Bootstrap support for P20192 as seed ortholog is 83%.

Group of orthologs #493. Best score 747 bits
Score difference with first non-orthologous sequence - C.intestinalis:747 S.scrofa:747

H2XUE4              	100.00%		F1S5Z3              	100.00%
Bootstrap support for H2XUE4 as seed ortholog is 100%.
Bootstrap support for F1S5Z3 as seed ortholog is 100%.

Group of orthologs #494. Best score 746 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 S.scrofa:19

F6SWW8              	100.00%		P31636              	100.00%
F6YSD1              	18.67%		P26429              	37.50%
Bootstrap support for F6SWW8 as seed ortholog is 99%.
Bootstrap support for P31636 as seed ortholog is 64%.
Alternative seed ortholog is A8I1B9 (19 bits away from this cluster)

Group of orthologs #495. Best score 745 bits
Score difference with first non-orthologous sequence - C.intestinalis:745 S.scrofa:204

Q1RLE7              	100.00%		F1S6D2              	100.00%
                    	       		F1SHP1              	17.08%
                    	       		F1S6D3              	5.56%
Bootstrap support for Q1RLE7 as seed ortholog is 100%.
Bootstrap support for F1S6D2 as seed ortholog is 99%.

Group of orthologs #496. Best score 745 bits
Score difference with first non-orthologous sequence - C.intestinalis:745 S.scrofa:745

F6WEC9              	100.00%		F1SN75              	100.00%
Bootstrap support for F6WEC9 as seed ortholog is 100%.
Bootstrap support for F1SN75 as seed ortholog is 100%.

Group of orthologs #497. Best score 745 bits
Score difference with first non-orthologous sequence - C.intestinalis:745 S.scrofa:745

F6VYC6              	100.00%		I3L5T8              	100.00%
Bootstrap support for F6VYC6 as seed ortholog is 100%.
Bootstrap support for I3L5T8 as seed ortholog is 100%.

Group of orthologs #498. Best score 744 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 S.scrofa:168

F6T8C7              	100.00%		P68137              	100.00%
L7N0T1              	20.00%		B6VNT8              	76.19%
F6SDC9              	15.00%		C7AI81              	42.86%
Bootstrap support for F6T8C7 as seed ortholog is 98%.
Bootstrap support for P68137 as seed ortholog is 100%.

Group of orthologs #499. Best score 744 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.scrofa:185

A2SY09              	100.00%		Q6QAQ1              	100.00%
Bootstrap support for A2SY09 as seed ortholog is 86%.
Bootstrap support for Q6QAQ1 as seed ortholog is 100%.

Group of orthologs #500. Best score 742 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 S.scrofa:292

F6WXR3              	100.00%		Q8HY46              	100.00%
                    	       		I3LF63              	7.63%
Bootstrap support for F6WXR3 as seed ortholog is 100%.
Bootstrap support for Q8HY46 as seed ortholog is 100%.

Group of orthologs #501. Best score 742 bits
Score difference with first non-orthologous sequence - C.intestinalis:742 S.scrofa:594

F6WR85              	100.00%		P09623              	100.00%
Bootstrap support for F6WR85 as seed ortholog is 100%.
Bootstrap support for P09623 as seed ortholog is 100%.

Group of orthologs #502. Best score 741 bits
Score difference with first non-orthologous sequence - C.intestinalis:741 S.scrofa:741

F6SXW5              	100.00%		F1RS34              	100.00%
Bootstrap support for F6SXW5 as seed ortholog is 100%.
Bootstrap support for F1RS34 as seed ortholog is 100%.

Group of orthologs #503. Best score 740 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:213

F6X9G8              	100.00%		P15145              	100.00%
Bootstrap support for F6X9G8 as seed ortholog is 98%.
Bootstrap support for P15145 as seed ortholog is 99%.

Group of orthologs #504. Best score 739 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 S.scrofa:361

Q4H2R0              	100.00%		Q9TUZ0              	100.00%
                    	       		Q9TUZ1              	100.00%
Bootstrap support for Q4H2R0 as seed ortholog is 100%.
Bootstrap support for Q9TUZ0 as seed ortholog is 100%.
Bootstrap support for Q9TUZ1 as seed ortholog is 100%.

Group of orthologs #505. Best score 739 bits
Score difference with first non-orthologous sequence - C.intestinalis:739 S.scrofa:426

F6XVY9              	100.00%		F1SNS1              	100.00%
Bootstrap support for F6XVY9 as seed ortholog is 100%.
Bootstrap support for F1SNS1 as seed ortholog is 100%.

Group of orthologs #506. Best score 739 bits
Score difference with first non-orthologous sequence - C.intestinalis:739 S.scrofa:739

F6PQ94              	100.00%		I3LT30              	100.00%
Bootstrap support for F6PQ94 as seed ortholog is 100%.
Bootstrap support for I3LT30 as seed ortholog is 100%.

Group of orthologs #507. Best score 738 bits
Score difference with first non-orthologous sequence - C.intestinalis:738 S.scrofa:738

H2Y1G5              	100.00%		F1RYQ6              	100.00%
Bootstrap support for H2Y1G5 as seed ortholog is 100%.
Bootstrap support for F1RYQ6 as seed ortholog is 100%.

Group of orthologs #508. Best score 737 bits
Score difference with first non-orthologous sequence - C.intestinalis:737 S.scrofa:737

F6XIP9              	100.00%		F1SKJ5              	100.00%
Bootstrap support for F6XIP9 as seed ortholog is 100%.
Bootstrap support for F1SKJ5 as seed ortholog is 100%.

Group of orthologs #509. Best score 737 bits
Score difference with first non-orthologous sequence - C.intestinalis:737 S.scrofa:337

F6TM76              	100.00%		Q29116              	100.00%
Bootstrap support for F6TM76 as seed ortholog is 100%.
Bootstrap support for Q29116 as seed ortholog is 99%.

Group of orthologs #510. Best score 737 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.scrofa:737

O76808              	100.00%		I3LDF9              	100.00%
Bootstrap support for O76808 as seed ortholog is 100%.
Bootstrap support for I3LDF9 as seed ortholog is 100%.

Group of orthologs #511. Best score 736 bits
Score difference with first non-orthologous sequence - C.intestinalis:736 S.scrofa:736

F6SWH7              	100.00%		F1SSB8              	100.00%
Bootstrap support for F6SWH7 as seed ortholog is 100%.
Bootstrap support for F1SSB8 as seed ortholog is 100%.

Group of orthologs #512. Best score 735 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:199

H2XSE7              	100.00%		Q2XQV4              	100.00%
                    	       		F1ST54              	10.76%
Bootstrap support for H2XSE7 as seed ortholog is 99%.
Bootstrap support for Q2XQV4 as seed ortholog is 100%.

Group of orthologs #513. Best score 734 bits
Score difference with first non-orthologous sequence - C.intestinalis:734 S.scrofa:734

F6YQS6              	100.00%		I3LCG9              	100.00%
                    	       		B5SYT7              	25.18%
Bootstrap support for F6YQS6 as seed ortholog is 100%.
Bootstrap support for I3LCG9 as seed ortholog is 100%.

Group of orthologs #514. Best score 733 bits
Score difference with first non-orthologous sequence - C.intestinalis:733 S.scrofa:733

H2XM66              	100.00%		F1RG77              	100.00%
                    	       		F1SSB0              	26.85%
                    	       		I3L5V4              	14.46%
Bootstrap support for H2XM66 as seed ortholog is 100%.
Bootstrap support for F1RG77 as seed ortholog is 100%.

Group of orthologs #515. Best score 733 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 S.scrofa:733

F6QJ41              	100.00%		F1S3N9              	100.00%
Bootstrap support for F6QJ41 as seed ortholog is 100%.
Bootstrap support for F1S3N9 as seed ortholog is 100%.

Group of orthologs #516. Best score 733 bits
Score difference with first non-orthologous sequence - C.intestinalis:733 S.scrofa:258

F6T4Y7              	100.00%		F1SJK7              	100.00%
Bootstrap support for F6T4Y7 as seed ortholog is 100%.
Bootstrap support for F1SJK7 as seed ortholog is 99%.

Group of orthologs #517. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:732 S.scrofa:190

F6UI47              	100.00%		F1SHL9              	100.00%
Bootstrap support for F6UI47 as seed ortholog is 100%.
Bootstrap support for F1SHL9 as seed ortholog is 100%.

Group of orthologs #518. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:732 S.scrofa:732

F6Z761              	100.00%		P10173              	100.00%
Bootstrap support for F6Z761 as seed ortholog is 100%.
Bootstrap support for P10173 as seed ortholog is 100%.

Group of orthologs #519. Best score 730 bits
Score difference with first non-orthologous sequence - C.intestinalis:550 S.scrofa:550

F6Z194              	100.00%		Q29024              	100.00%
                    	       		F1SCH3              	50.00%
Bootstrap support for F6Z194 as seed ortholog is 100%.
Bootstrap support for Q29024 as seed ortholog is 100%.

Group of orthologs #520. Best score 730 bits
Score difference with first non-orthologous sequence - C.intestinalis:730 S.scrofa:730

F6RKU1              	100.00%		I3LM15              	100.00%
Bootstrap support for F6RKU1 as seed ortholog is 100%.
Bootstrap support for I3LM15 as seed ortholog is 100%.

Group of orthologs #521. Best score 730 bits
Score difference with first non-orthologous sequence - C.intestinalis:730 S.scrofa:61

H2XPX0              	100.00%		I3LE69              	100.00%
Bootstrap support for H2XPX0 as seed ortholog is 100%.
Bootstrap support for I3LE69 as seed ortholog is 87%.

Group of orthologs #522. Best score 728 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 S.scrofa:243

F6Q0U4              	100.00%		F1RIU3              	100.00%
Bootstrap support for F6Q0U4 as seed ortholog is 100%.
Bootstrap support for F1RIU3 as seed ortholog is 100%.

Group of orthologs #523. Best score 728 bits
Score difference with first non-orthologous sequence - C.intestinalis:728 S.scrofa:728

F6ZHD7              	100.00%		F1RQC8              	100.00%
Bootstrap support for F6ZHD7 as seed ortholog is 100%.
Bootstrap support for F1RQC8 as seed ortholog is 100%.

Group of orthologs #524. Best score 727 bits
Score difference with first non-orthologous sequence - C.intestinalis:727 S.scrofa:443

F6VL21              	100.00%		F1RG86              	100.00%
                    	       		F1RUX3              	68.05%
Bootstrap support for F6VL21 as seed ortholog is 100%.
Bootstrap support for F1RG86 as seed ortholog is 100%.

Group of orthologs #525. Best score 726 bits
Score difference with first non-orthologous sequence - C.intestinalis:726 S.scrofa:169

F6ZDC7              	100.00%		F1S814              	100.00%
Bootstrap support for F6ZDC7 as seed ortholog is 100%.
Bootstrap support for F1S814 as seed ortholog is 100%.

Group of orthologs #526. Best score 726 bits
Score difference with first non-orthologous sequence - C.intestinalis:726 S.scrofa:726

F6Y921              	100.00%		F1SDZ2              	100.00%
Bootstrap support for F6Y921 as seed ortholog is 100%.
Bootstrap support for F1SDZ2 as seed ortholog is 100%.

Group of orthologs #527. Best score 726 bits
Score difference with first non-orthologous sequence - C.intestinalis:726 S.scrofa:726

F7APX0              	100.00%		I3LLK8              	100.00%
Bootstrap support for F7APX0 as seed ortholog is 100%.
Bootstrap support for I3LLK8 as seed ortholog is 100%.

Group of orthologs #528. Best score 725 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.scrofa:75

F6SZ48              	100.00%		I3L781              	100.00%
                    	       		F1SFA7              	60.42%
                    	       		I3LSV6              	24.35%
                    	       		F1RXW0              	18.38%
Bootstrap support for F6SZ48 as seed ortholog is 35%.
Alternative seed ortholog is F6UEW3 (158 bits away from this cluster)
Bootstrap support for I3L781 as seed ortholog is 56%.
Alternative seed ortholog is F1RYI8 (75 bits away from this cluster)

Group of orthologs #529. Best score 725 bits
Score difference with first non-orthologous sequence - C.intestinalis:725 S.scrofa:528

H2XW04              	100.00%		F1SHI1              	100.00%
Bootstrap support for H2XW04 as seed ortholog is 100%.
Bootstrap support for F1SHI1 as seed ortholog is 100%.

Group of orthologs #530. Best score 725 bits
Score difference with first non-orthologous sequence - C.intestinalis:725 S.scrofa:249

F6VP00              	100.00%		O02697              	100.00%
Bootstrap support for F6VP00 as seed ortholog is 100%.
Bootstrap support for O02697 as seed ortholog is 99%.

Group of orthologs #531. Best score 724 bits
Score difference with first non-orthologous sequence - C.intestinalis:653 S.scrofa:361

F6YKJ2              	100.00%		F1STI4              	100.00%
                    	       		F1RQ27              	36.36%
                    	       		F1RQ28              	14.77%
Bootstrap support for F6YKJ2 as seed ortholog is 100%.
Bootstrap support for F1STI4 as seed ortholog is 100%.

Group of orthologs #532. Best score 724 bits
Score difference with first non-orthologous sequence - C.intestinalis:531 S.scrofa:467

F6XF93              	100.00%		A6M931              	100.00%
Bootstrap support for F6XF93 as seed ortholog is 100%.
Bootstrap support for A6M931 as seed ortholog is 100%.

Group of orthologs #533. Best score 723 bits
Score difference with first non-orthologous sequence - C.intestinalis:723 S.scrofa:586

F6R4T5              	100.00%		F1RQH2              	100.00%
                    	       		F1SHB1              	20.15%
Bootstrap support for F6R4T5 as seed ortholog is 100%.
Bootstrap support for F1RQH2 as seed ortholog is 100%.

Group of orthologs #534. Best score 722 bits
Score difference with first non-orthologous sequence - C.intestinalis:722 S.scrofa:722

F6R1L9              	100.00%		F1RXU8              	100.00%
Bootstrap support for F6R1L9 as seed ortholog is 100%.
Bootstrap support for F1RXU8 as seed ortholog is 100%.

Group of orthologs #535. Best score 722 bits
Score difference with first non-orthologous sequence - C.intestinalis:550 S.scrofa:432

Q4H2T4              	100.00%		Q9GKQ9              	100.00%
Bootstrap support for Q4H2T4 as seed ortholog is 100%.
Bootstrap support for Q9GKQ9 as seed ortholog is 100%.

Group of orthologs #536. Best score 720 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 S.scrofa:720

H2XTS9              	100.00%		I3LMX7              	100.00%
                    	       		F1SRV8              	13.42%
Bootstrap support for H2XTS9 as seed ortholog is 100%.
Bootstrap support for I3LMX7 as seed ortholog is 100%.

Group of orthologs #537. Best score 720 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 S.scrofa:193

F6WWM2              	100.00%		F1RID4              	100.00%
Bootstrap support for F6WWM2 as seed ortholog is 100%.
Bootstrap support for F1RID4 as seed ortholog is 99%.

Group of orthologs #538. Best score 718 bits
Score difference with first non-orthologous sequence - C.intestinalis:718 S.scrofa:646

F6UMX9              	100.00%		C1JEX7              	100.00%
Bootstrap support for F6UMX9 as seed ortholog is 100%.
Bootstrap support for C1JEX7 as seed ortholog is 100%.

Group of orthologs #539. Best score 718 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 S.scrofa:91

F6U0I8              	100.00%		F1S1E7              	100.00%
Bootstrap support for F6U0I8 as seed ortholog is 100%.
Bootstrap support for F1S1E7 as seed ortholog is 98%.

Group of orthologs #540. Best score 718 bits
Score difference with first non-orthologous sequence - C.intestinalis:718 S.scrofa:718

F6QEZ7              	100.00%		F1SDQ4              	100.00%
Bootstrap support for F6QEZ7 as seed ortholog is 100%.
Bootstrap support for F1SDQ4 as seed ortholog is 100%.

Group of orthologs #541. Best score 718 bits
Score difference with first non-orthologous sequence - C.intestinalis:718 S.scrofa:118

F6WA81              	100.00%		F1SH14              	100.00%
Bootstrap support for F6WA81 as seed ortholog is 100%.
Bootstrap support for F1SH14 as seed ortholog is 98%.

Group of orthologs #542. Best score 717 bits
Score difference with first non-orthologous sequence - C.intestinalis:504 S.scrofa:42

F7A961              	100.00%		F1S584              	100.00%
                    	       		F1S9Q9              	14.70%
Bootstrap support for F7A961 as seed ortholog is 100%.
Bootstrap support for F1S584 as seed ortholog is 78%.

Group of orthologs #543. Best score 717 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 S.scrofa:379

F6Y8H4              	100.00%		I3LLQ8              	100.00%
Bootstrap support for F6Y8H4 as seed ortholog is 100%.
Bootstrap support for I3LLQ8 as seed ortholog is 100%.

Group of orthologs #544. Best score 716 bits
Score difference with first non-orthologous sequence - C.intestinalis:716 S.scrofa:716

F6ZCC7              	100.00%		F1SB85              	100.00%
Bootstrap support for F6ZCC7 as seed ortholog is 100%.
Bootstrap support for F1SB85 as seed ortholog is 100%.

Group of orthologs #545. Best score 716 bits
Score difference with first non-orthologous sequence - C.intestinalis:594 S.scrofa:579

F6YDF4              	100.00%		I3LNB4              	100.00%
Bootstrap support for F6YDF4 as seed ortholog is 100%.
Bootstrap support for I3LNB4 as seed ortholog is 100%.

Group of orthologs #546. Best score 716 bits
Score difference with first non-orthologous sequence - C.intestinalis:716 S.scrofa:716

H2Y1C4              	100.00%		F1SMU6              	100.00%
Bootstrap support for H2Y1C4 as seed ortholog is 100%.
Bootstrap support for F1SMU6 as seed ortholog is 100%.

Group of orthologs #547. Best score 715 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.scrofa:404

F6R554              	100.00%		F1RIZ9              	100.00%
                    	       		I3LK37              	55.08%
Bootstrap support for F6R554 as seed ortholog is 99%.
Bootstrap support for F1RIZ9 as seed ortholog is 100%.

Group of orthologs #548. Best score 715 bits
Score difference with first non-orthologous sequence - C.intestinalis:715 S.scrofa:277

F7ARH4              	100.00%		F1SIB6              	100.00%
                    	       		F1SQ65              	7.76%
Bootstrap support for F7ARH4 as seed ortholog is 100%.
Bootstrap support for F1SIB6 as seed ortholog is 99%.

Group of orthologs #549. Best score 715 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.scrofa:17

F6XQ30              	100.00%		I3LR93              	100.00%
                    	       		F1SK80              	29.62%
Bootstrap support for F6XQ30 as seed ortholog is 83%.
Bootstrap support for I3LR93 as seed ortholog is 65%.
Alternative seed ortholog is I3L6B0 (17 bits away from this cluster)

Group of orthologs #550. Best score 715 bits
Score difference with first non-orthologous sequence - C.intestinalis:715 S.scrofa:715

F6XKK7              	100.00%		F1SIA1              	100.00%
Bootstrap support for F6XKK7 as seed ortholog is 100%.
Bootstrap support for F1SIA1 as seed ortholog is 100%.

Group of orthologs #551. Best score 715 bits
Score difference with first non-orthologous sequence - C.intestinalis:715 S.scrofa:298

F7B2M5              	100.00%		F1S9K1              	100.00%
Bootstrap support for F7B2M5 as seed ortholog is 100%.
Bootstrap support for F1S9K1 as seed ortholog is 100%.

Group of orthologs #552. Best score 715 bits
Score difference with first non-orthologous sequence - C.intestinalis:715 S.scrofa:715

F6XRI7              	100.00%		I3L897              	100.00%
Bootstrap support for F6XRI7 as seed ortholog is 100%.
Bootstrap support for I3L897 as seed ortholog is 100%.

Group of orthologs #553. Best score 713 bits
Score difference with first non-orthologous sequence - C.intestinalis:713 S.scrofa:117

H2Y2D6              	100.00%		F1S0D7              	100.00%
                    	       		I3L7V1              	94.68%
Bootstrap support for H2Y2D6 as seed ortholog is 100%.
Bootstrap support for F1S0D7 as seed ortholog is 96%.

Group of orthologs #554. Best score 713 bits
Score difference with first non-orthologous sequence - C.intestinalis:713 S.scrofa:713

F6Y025              	100.00%		F1SQR7              	100.00%
Bootstrap support for F6Y025 as seed ortholog is 100%.
Bootstrap support for F1SQR7 as seed ortholog is 100%.

Group of orthologs #555. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:712 S.scrofa:712

F6TG24              	100.00%		F1RF77              	100.00%
                    	       		F1SKE2              	15.19%
                    	       		I3LA84              	6.92%
Bootstrap support for F6TG24 as seed ortholog is 100%.
Bootstrap support for F1RF77 as seed ortholog is 100%.

Group of orthologs #556. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:712 S.scrofa:712

F7A429              	100.00%		A8U4R4              	100.00%
                    	       		I3LCX0              	9.60%
                    	       		I3L954              	6.97%
Bootstrap support for F7A429 as seed ortholog is 100%.
Bootstrap support for A8U4R4 as seed ortholog is 100%.

Group of orthologs #557. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 S.scrofa:712

F6W213              	100.00%		K7GT64              	100.00%
                    	       		F1SJG5              	67.20%
Bootstrap support for F6W213 as seed ortholog is 100%.
Bootstrap support for K7GT64 as seed ortholog is 100%.

Group of orthologs #558. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:712 S.scrofa:484

H2XQT6              	100.00%		F1RPJ8              	100.00%
Bootstrap support for H2XQT6 as seed ortholog is 100%.
Bootstrap support for F1RPJ8 as seed ortholog is 100%.

Group of orthologs #559. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.scrofa:237

F7ACX7              	100.00%		P20305              	100.00%
Bootstrap support for F7ACX7 as seed ortholog is 95%.
Bootstrap support for P20305 as seed ortholog is 99%.

Group of orthologs #560. Best score 711 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 S.scrofa:196

F6XVE4              	100.00%		F1RG44              	100.00%
Bootstrap support for F6XVE4 as seed ortholog is 100%.
Bootstrap support for F1RG44 as seed ortholog is 99%.

Group of orthologs #561. Best score 711 bits
Score difference with first non-orthologous sequence - C.intestinalis:711 S.scrofa:711

F6TPA2              	100.00%		F1SV40              	100.00%
Bootstrap support for F6TPA2 as seed ortholog is 100%.
Bootstrap support for F1SV40 as seed ortholog is 100%.

Group of orthologs #562. Best score 711 bits
Score difference with first non-orthologous sequence - C.intestinalis:711 S.scrofa:279

F6VEU9              	100.00%		F2Z5I7              	100.00%
Bootstrap support for F6VEU9 as seed ortholog is 100%.
Bootstrap support for F2Z5I7 as seed ortholog is 100%.

Group of orthologs #563. Best score 711 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.scrofa:283

F6ZJN8              	100.00%		P0CG68              	100.00%
Bootstrap support for F6ZJN8 as seed ortholog is 100%.
Bootstrap support for P0CG68 as seed ortholog is 100%.

Group of orthologs #564. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:600 S.scrofa:275

F6T718              	100.00%		F1RYI2              	100.00%
Bootstrap support for F6T718 as seed ortholog is 100%.
Bootstrap support for F1RYI2 as seed ortholog is 100%.

Group of orthologs #565. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:307

F6ZFK4              	100.00%		F1SC64              	100.00%
Bootstrap support for F6ZFK4 as seed ortholog is 95%.
Bootstrap support for F1SC64 as seed ortholog is 100%.

Group of orthologs #566. Best score 709 bits
Score difference with first non-orthologous sequence - C.intestinalis:709 S.scrofa:709

F6ZAD3              	100.00%		F1RFB2              	100.00%
Bootstrap support for F6ZAD3 as seed ortholog is 100%.
Bootstrap support for F1RFB2 as seed ortholog is 100%.

Group of orthologs #567. Best score 709 bits
Score difference with first non-orthologous sequence - C.intestinalis:709 S.scrofa:602

F6QWS2              	100.00%		F1SAD9              	100.00%
Bootstrap support for F6QWS2 as seed ortholog is 100%.
Bootstrap support for F1SAD9 as seed ortholog is 100%.

Group of orthologs #568. Best score 708 bits
Score difference with first non-orthologous sequence - C.intestinalis:708 S.scrofa:708

H2XXU0              	100.00%		F1S9W8              	100.00%
                    	       		F1RU40              	6.93%
                    	       		F1RRN1              	5.54%
Bootstrap support for H2XXU0 as seed ortholog is 100%.
Bootstrap support for F1S9W8 as seed ortholog is 100%.

Group of orthologs #569. Best score 708 bits
Score difference with first non-orthologous sequence - C.intestinalis:708 S.scrofa:262

F6QID5              	100.00%		F1RS11              	100.00%
Bootstrap support for F6QID5 as seed ortholog is 100%.
Bootstrap support for F1RS11 as seed ortholog is 100%.

Group of orthologs #570. Best score 708 bits
Score difference with first non-orthologous sequence - C.intestinalis:708 S.scrofa:9

F6PLQ2              	100.00%		I3LMS7              	100.00%
Bootstrap support for F6PLQ2 as seed ortholog is 100%.
Bootstrap support for I3LMS7 as seed ortholog is 63%.
Alternative seed ortholog is K7GSP7 (9 bits away from this cluster)

Group of orthologs #571. Best score 707 bits
Score difference with first non-orthologous sequence - C.intestinalis:707 S.scrofa:339

F7AV37              	100.00%		F1SID7              	100.00%
                    	       		F1RH19              	27.46%
                    	       		F1SRI8              	24.41%
Bootstrap support for F7AV37 as seed ortholog is 100%.
Bootstrap support for F1SID7 as seed ortholog is 100%.

Group of orthologs #572. Best score 707 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 S.scrofa:448

F7AHA3              	100.00%		I3LLM3              	100.00%
Bootstrap support for F7AHA3 as seed ortholog is 100%.
Bootstrap support for I3LLM3 as seed ortholog is 100%.

Group of orthologs #573. Best score 705 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 S.scrofa:128

F6YWW9              	100.00%		F1RMJ1              	100.00%
F6WDF7              	25.79%		I3LT46              	7.90%
Bootstrap support for F6YWW9 as seed ortholog is 99%.
Bootstrap support for F1RMJ1 as seed ortholog is 99%.

Group of orthologs #574. Best score 705 bits
Score difference with first non-orthologous sequence - C.intestinalis:705 S.scrofa:705

F6S7I2              	100.00%		F1S1X8              	100.00%
Bootstrap support for F6S7I2 as seed ortholog is 100%.
Bootstrap support for F1S1X8 as seed ortholog is 100%.

Group of orthologs #575. Best score 705 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:63

F6XJD6              	100.00%		F1SD02              	100.00%
Bootstrap support for F6XJD6 as seed ortholog is 99%.
Bootstrap support for F1SD02 as seed ortholog is 90%.

Group of orthologs #576. Best score 705 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 S.scrofa:425

F6REB0              	100.00%		I3LHF5              	100.00%
Bootstrap support for F6REB0 as seed ortholog is 100%.
Bootstrap support for I3LHF5 as seed ortholog is 100%.

Group of orthologs #577. Best score 705 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.scrofa:705

F6YR02              	100.00%		I3LT90              	100.00%
Bootstrap support for F6YR02 as seed ortholog is 100%.
Bootstrap support for I3LT90 as seed ortholog is 100%.

Group of orthologs #578. Best score 704 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.scrofa:162

F6TPL8              	100.00%		F1S9J2              	100.00%
F6TKP0              	40.53%		P09933              	99.10%
F7B882              	30.11%		
Bootstrap support for F6TPL8 as seed ortholog is 99%.
Bootstrap support for F1S9J2 as seed ortholog is 99%.

Group of orthologs #579. Best score 703 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 S.scrofa:608

F6X7X8              	100.00%		F1RUJ9              	100.00%
                    	       		I3LNK5              	36.40%
Bootstrap support for F6X7X8 as seed ortholog is 100%.
Bootstrap support for F1RUJ9 as seed ortholog is 100%.

Group of orthologs #580. Best score 703 bits
Score difference with first non-orthologous sequence - C.intestinalis:703 S.scrofa:703

F6WHS8              	100.00%		F1RK64              	100.00%
Bootstrap support for F6WHS8 as seed ortholog is 100%.
Bootstrap support for F1RK64 as seed ortholog is 100%.

Group of orthologs #581. Best score 703 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 S.scrofa:366

F7BHP4              	100.00%		P62197              	100.00%
Bootstrap support for F7BHP4 as seed ortholog is 100%.
Bootstrap support for P62197 as seed ortholog is 100%.

Group of orthologs #582. Best score 702 bits
Score difference with first non-orthologous sequence - C.intestinalis:702 S.scrofa:702

F7AYB9              	100.00%		F1S0D9              	100.00%
Bootstrap support for F7AYB9 as seed ortholog is 100%.
Bootstrap support for F1S0D9 as seed ortholog is 100%.

Group of orthologs #583. Best score 701 bits
Score difference with first non-orthologous sequence - C.intestinalis:701 S.scrofa:300

F6TPD4              	100.00%		I3LHM1              	100.00%
                    	       		I3L8N9              	63.29%
                    	       		F1RU73              	51.79%
                    	       		I3L9I7              	14.48%
Bootstrap support for F6TPD4 as seed ortholog is 100%.
Bootstrap support for I3LHM1 as seed ortholog is 100%.

Group of orthologs #584. Best score 701 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 S.scrofa:235

H2XWW7              	100.00%		F1RQR4              	100.00%
                    	       		I3LD72              	18.71%
                    	       		I3L7R0              	12.71%
Bootstrap support for H2XWW7 as seed ortholog is 100%.
Bootstrap support for F1RQR4 as seed ortholog is 100%.

Group of orthologs #585. Best score 701 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 S.scrofa:445

F6R472              	100.00%		F1SR61              	100.00%
Bootstrap support for F6R472 as seed ortholog is 100%.
Bootstrap support for F1SR61 as seed ortholog is 100%.

Group of orthologs #586. Best score 701 bits
Score difference with first non-orthologous sequence - C.intestinalis:701 S.scrofa:701

H2XPD8              	100.00%		I3LUQ5              	100.00%
Bootstrap support for H2XPD8 as seed ortholog is 100%.
Bootstrap support for I3LUQ5 as seed ortholog is 100%.

Group of orthologs #587. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:565 S.scrofa:129

F6U062              	100.00%		F1RV25              	100.00%
                    	       		I3LLP1              	86.84%
                    	       		I3LDW8              	56.20%
                    	       		I3LB38              	43.76%
                    	       		F1RV26              	29.49%
Bootstrap support for F6U062 as seed ortholog is 100%.
Bootstrap support for F1RV25 as seed ortholog is 95%.

Group of orthologs #588. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 S.scrofa:366

F6UWX3              	100.00%		F1SFE6              	100.00%
Bootstrap support for F6UWX3 as seed ortholog is 100%.
Bootstrap support for F1SFE6 as seed ortholog is 100%.

Group of orthologs #589. Best score 699 bits
Score difference with first non-orthologous sequence - C.intestinalis:699 S.scrofa:699

F6V9G2              	100.00%		F1RJJ2              	100.00%
Bootstrap support for F6V9G2 as seed ortholog is 100%.
Bootstrap support for F1RJJ2 as seed ortholog is 100%.

Group of orthologs #590. Best score 699 bits
Score difference with first non-orthologous sequence - C.intestinalis:699 S.scrofa:699

F7B4V9              	100.00%		F1S4I7              	100.00%
Bootstrap support for F7B4V9 as seed ortholog is 100%.
Bootstrap support for F1S4I7 as seed ortholog is 100%.

Group of orthologs #591. Best score 699 bits
Score difference with first non-orthologous sequence - C.intestinalis:699 S.scrofa:283

H2XUM1              	100.00%		F1RZ80              	100.00%
Bootstrap support for H2XUM1 as seed ortholog is 100%.
Bootstrap support for F1RZ80 as seed ortholog is 100%.

Group of orthologs #592. Best score 698 bits
Score difference with first non-orthologous sequence - C.intestinalis:698 S.scrofa:698

F6UW46              	100.00%		Q29090              	100.00%
                    	       		P54614              	27.17%
Bootstrap support for F6UW46 as seed ortholog is 100%.
Bootstrap support for Q29090 as seed ortholog is 100%.

Group of orthologs #593. Best score 698 bits
Score difference with first non-orthologous sequence - C.intestinalis:698 S.scrofa:698

F6QIK7              	100.00%		F1S3T1              	100.00%
Bootstrap support for F6QIK7 as seed ortholog is 100%.
Bootstrap support for F1S3T1 as seed ortholog is 100%.

Group of orthologs #594. Best score 697 bits
Score difference with first non-orthologous sequence - C.intestinalis:697 S.scrofa:645

F7AEC5              	100.00%		Q8WNW4              	100.00%
                    	       		F1RX81              	88.07%
                    	       		Q8WNW3              	29.94%
Bootstrap support for F7AEC5 as seed ortholog is 100%.
Bootstrap support for Q8WNW4 as seed ortholog is 100%.

Group of orthologs #595. Best score 696 bits
Score difference with first non-orthologous sequence - C.intestinalis:696 S.scrofa:568

F6WIL6              	100.00%		F1RN46              	100.00%
Bootstrap support for F6WIL6 as seed ortholog is 100%.
Bootstrap support for F1RN46 as seed ortholog is 100%.

Group of orthologs #596. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:695 S.scrofa:386

F6TTZ5              	100.00%		F1SQR8              	100.00%
Bootstrap support for F6TTZ5 as seed ortholog is 100%.
Bootstrap support for F1SQR8 as seed ortholog is 100%.

Group of orthologs #597. Best score 694 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 S.scrofa:266

F6RAB3              	100.00%		F2Z4Z6              	100.00%
Bootstrap support for F6RAB3 as seed ortholog is 100%.
Bootstrap support for F2Z4Z6 as seed ortholog is 100%.

Group of orthologs #598. Best score 694 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 S.scrofa:390

F6XKP0              	100.00%		F1SID4              	100.00%
Bootstrap support for F6XKP0 as seed ortholog is 100%.
Bootstrap support for F1SID4 as seed ortholog is 100%.

Group of orthologs #599. Best score 694 bits
Score difference with first non-orthologous sequence - C.intestinalis:694 S.scrofa:694

F7AX62              	100.00%		I3L677              	100.00%
Bootstrap support for F7AX62 as seed ortholog is 100%.
Bootstrap support for I3L677 as seed ortholog is 100%.

Group of orthologs #600. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 S.scrofa:122

F6TAP2              	100.00%		F1S2D4              	100.00%
                    	       		F1S3S0              	15.09%
                    	       		F1S3S4              	14.77%
                    	       		I3LG99              	6.22%
Bootstrap support for F6TAP2 as seed ortholog is 100%.
Bootstrap support for F1S2D4 as seed ortholog is 99%.

Group of orthologs #601. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 S.scrofa:359

H2XVM9              	100.00%		F1SM00              	100.00%
                    	       		I3LRY4              	100.00%
                    	       		F1SLI6              	18.30%
Bootstrap support for H2XVM9 as seed ortholog is 100%.
Bootstrap support for F1SM00 as seed ortholog is 100%.
Bootstrap support for I3LRY4 as seed ortholog is 100%.

Group of orthologs #602. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 S.scrofa:693

F6Z3I0              	100.00%		F1RX50              	100.00%
Bootstrap support for F6Z3I0 as seed ortholog is 100%.
Bootstrap support for F1RX50 as seed ortholog is 100%.

Group of orthologs #603. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 S.scrofa:693

F7A8S2              	100.00%		F1SAA1              	100.00%
Bootstrap support for F7A8S2 as seed ortholog is 100%.
Bootstrap support for F1SAA1 as seed ortholog is 100%.

Group of orthologs #604. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 S.scrofa:693

F6X7U3              	100.00%		F1SMU8              	100.00%
Bootstrap support for F6X7U3 as seed ortholog is 100%.
Bootstrap support for F1SMU8 as seed ortholog is 100%.

Group of orthologs #605. Best score 692 bits
Score difference with first non-orthologous sequence - C.intestinalis:692 S.scrofa:518

F6WZA5              	100.00%		F1SHY0              	100.00%
                    	       		F1S4T0              	44.55%
Bootstrap support for F6WZA5 as seed ortholog is 100%.
Bootstrap support for F1SHY0 as seed ortholog is 100%.

Group of orthologs #606. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 S.scrofa:691

A1XDA5              	100.00%		Q06AK6              	100.00%
                    	       		F1RG71              	98.26%
Bootstrap support for A1XDA5 as seed ortholog is 100%.
Bootstrap support for Q06AK6 as seed ortholog is 100%.

Group of orthologs #607. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 S.scrofa:691

F6YYY1              	100.00%		I3LQL7              	100.00%
                    	       		I3LLW5              	34.92%
Bootstrap support for F6YYY1 as seed ortholog is 100%.
Bootstrap support for I3LQL7 as seed ortholog is 100%.

Group of orthologs #608. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.scrofa:428

F6YDG7              	100.00%		F1S5A8              	100.00%
Bootstrap support for F6YDG7 as seed ortholog is 99%.
Bootstrap support for F1S5A8 as seed ortholog is 100%.

Group of orthologs #609. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 S.scrofa:691

F6VCH9              	100.00%		F1SML4              	100.00%
Bootstrap support for F6VCH9 as seed ortholog is 100%.
Bootstrap support for F1SML4 as seed ortholog is 100%.

Group of orthologs #610. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:690 S.scrofa:690

F6TP68              	100.00%		F1RRB8              	100.00%
Bootstrap support for F6TP68 as seed ortholog is 100%.
Bootstrap support for F1RRB8 as seed ortholog is 100%.

Group of orthologs #611. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 S.scrofa:358

F6YBA5              	100.00%		F1RFN6              	100.00%
Bootstrap support for F6YBA5 as seed ortholog is 100%.
Bootstrap support for F1RFN6 as seed ortholog is 100%.

Group of orthologs #612. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:690 S.scrofa:690

F6Q601              	100.00%		F1S754              	100.00%
Bootstrap support for F6Q601 as seed ortholog is 100%.
Bootstrap support for F1S754 as seed ortholog is 100%.

Group of orthologs #613. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:690 S.scrofa:690

F6YY15              	100.00%		F1RLR4              	100.00%
Bootstrap support for F6YY15 as seed ortholog is 100%.
Bootstrap support for F1RLR4 as seed ortholog is 100%.

Group of orthologs #614. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:690 S.scrofa:690

F7B6E8              	100.00%		F1SS25              	100.00%
Bootstrap support for F7B6E8 as seed ortholog is 100%.
Bootstrap support for F1SS25 as seed ortholog is 100%.

Group of orthologs #615. Best score 689 bits
Score difference with first non-orthologous sequence - C.intestinalis:689 S.scrofa:689

F6V549              	100.00%		F1S8T6              	100.00%
Bootstrap support for F6V549 as seed ortholog is 100%.
Bootstrap support for F1S8T6 as seed ortholog is 100%.

Group of orthologs #616. Best score 689 bits
Score difference with first non-orthologous sequence - C.intestinalis:689 S.scrofa:689

F6Y677              	100.00%		F1SDY6              	100.00%
Bootstrap support for F6Y677 as seed ortholog is 100%.
Bootstrap support for F1SDY6 as seed ortholog is 100%.

Group of orthologs #617. Best score 689 bits
Score difference with first non-orthologous sequence - C.intestinalis:689 S.scrofa:689

H2XU13              	100.00%		P00889              	100.00%
Bootstrap support for H2XU13 as seed ortholog is 100%.
Bootstrap support for P00889 as seed ortholog is 100%.

Group of orthologs #618. Best score 688 bits
Score difference with first non-orthologous sequence - C.intestinalis:551 S.scrofa:403

F6XT42              	100.00%		I3L9V1              	100.00%
                    	       		F1SGV5              	92.55%
                    	       		I3LSF5              	7.67%
Bootstrap support for F6XT42 as seed ortholog is 100%.
Bootstrap support for I3L9V1 as seed ortholog is 100%.

Group of orthologs #619. Best score 688 bits
Score difference with first non-orthologous sequence - C.intestinalis:597 S.scrofa:638

H2XYU1              	100.00%		A5D9K6              	100.00%
                    	       		F1S033              	19.45%
Bootstrap support for H2XYU1 as seed ortholog is 100%.
Bootstrap support for A5D9K6 as seed ortholog is 100%.

Group of orthologs #620. Best score 688 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 S.scrofa:206

F6QNQ9              	100.00%		P26044              	100.00%
                    	       		P26042              	54.33%
Bootstrap support for F6QNQ9 as seed ortholog is 100%.
Bootstrap support for P26044 as seed ortholog is 100%.

Group of orthologs #621. Best score 686 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 S.scrofa:594

F6X873              	100.00%		F1RZ11              	100.00%
                    	       		I3LSE2              	35.12%
                    	       		F1SJS3              	31.18%
                    	       		F1RNJ7              	26.26%
Bootstrap support for F6X873 as seed ortholog is 100%.
Bootstrap support for F1RZ11 as seed ortholog is 100%.

Group of orthologs #622. Best score 686 bits
Score difference with first non-orthologous sequence - C.intestinalis:686 S.scrofa:686

F6UQJ9              	100.00%		F1RTC4              	100.00%
                    	       		F1RK31              	39.65%
Bootstrap support for F6UQJ9 as seed ortholog is 100%.
Bootstrap support for F1RTC4 as seed ortholog is 100%.

Group of orthologs #623. Best score 685 bits
Score difference with first non-orthologous sequence - C.intestinalis:562 S.scrofa:351

F6SZU4              	100.00%		F1RSZ3              	100.00%
F6T060              	61.26%		F1RJV7              	40.68%
                    	       		I3LCL6              	23.70%
                    	       		F1S5J8              	23.29%
Bootstrap support for F6SZU4 as seed ortholog is 100%.
Bootstrap support for F1RSZ3 as seed ortholog is 100%.

Group of orthologs #624. Best score 684 bits
Score difference with first non-orthologous sequence - C.intestinalis:684 S.scrofa:684

F6RCY1              	100.00%		I3LHM3              	100.00%
                    	       		I3LTP0              	14.40%
                    	       		F1SEV4              	7.70%
Bootstrap support for F6RCY1 as seed ortholog is 100%.
Bootstrap support for I3LHM3 as seed ortholog is 100%.

Group of orthologs #625. Best score 684 bits
Score difference with first non-orthologous sequence - C.intestinalis:684 S.scrofa:684

F7APA8              	100.00%		F1RJQ6              	100.00%
Bootstrap support for F7APA8 as seed ortholog is 100%.
Bootstrap support for F1RJQ6 as seed ortholog is 100%.

Group of orthologs #626. Best score 684 bits
Score difference with first non-orthologous sequence - C.intestinalis:684 S.scrofa:73

H2Y2A4              	100.00%		Q9MYY8              	100.00%
Bootstrap support for H2Y2A4 as seed ortholog is 100%.
Bootstrap support for Q9MYY8 as seed ortholog is 98%.

Group of orthologs #627. Best score 683 bits
Score difference with first non-orthologous sequence - C.intestinalis:683 S.scrofa:683

F6SZ37              	100.00%		F1S8A3              	100.00%
Bootstrap support for F6SZ37 as seed ortholog is 100%.
Bootstrap support for F1S8A3 as seed ortholog is 100%.

Group of orthologs #628. Best score 683 bits
Score difference with first non-orthologous sequence - C.intestinalis:683 S.scrofa:232

F6R8X1              	100.00%		I3L742              	100.00%
Bootstrap support for F6R8X1 as seed ortholog is 100%.
Bootstrap support for I3L742 as seed ortholog is 100%.

Group of orthologs #629. Best score 683 bits
Score difference with first non-orthologous sequence - C.intestinalis:683 S.scrofa:683

F6Y2U7              	100.00%		F1SNB8              	100.00%
Bootstrap support for F6Y2U7 as seed ortholog is 100%.
Bootstrap support for F1SNB8 as seed ortholog is 100%.

Group of orthologs #630. Best score 683 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 S.scrofa:683

F6YWP5              	100.00%		I3LM80              	100.00%
Bootstrap support for F6YWP5 as seed ortholog is 100%.
Bootstrap support for I3LM80 as seed ortholog is 100%.

Group of orthologs #631. Best score 681 bits
Score difference with first non-orthologous sequence - C.intestinalis:681 S.scrofa:681

F6T5V0              	100.00%		I3LIM2              	100.00%
Bootstrap support for F6T5V0 as seed ortholog is 100%.
Bootstrap support for I3LIM2 as seed ortholog is 100%.

Group of orthologs #632. Best score 681 bits
Score difference with first non-orthologous sequence - C.intestinalis:681 S.scrofa:681

H2XWM6              	100.00%		F1S8T4              	100.00%
Bootstrap support for H2XWM6 as seed ortholog is 100%.
Bootstrap support for F1S8T4 as seed ortholog is 100%.

Group of orthologs #633. Best score 680 bits
Score difference with first non-orthologous sequence - C.intestinalis:680 S.scrofa:680

F6XMT2              	100.00%		F1SFA6              	100.00%
Bootstrap support for F6XMT2 as seed ortholog is 100%.
Bootstrap support for F1SFA6 as seed ortholog is 100%.

Group of orthologs #634. Best score 679 bits
Score difference with first non-orthologous sequence - C.intestinalis:679 S.scrofa:679

F6TAK3              	100.00%		F1SCU6              	100.00%
                    	       		F1STL2              	35.25%
Bootstrap support for F6TAK3 as seed ortholog is 100%.
Bootstrap support for F1SCU6 as seed ortholog is 100%.

Group of orthologs #635. Best score 679 bits
Score difference with first non-orthologous sequence - C.intestinalis:679 S.scrofa:679

F7AQA9              	100.00%		F1RP04              	100.00%
                    	       		F1RSP5              	6.84%
Bootstrap support for F7AQA9 as seed ortholog is 100%.
Bootstrap support for F1RP04 as seed ortholog is 100%.

Group of orthologs #636. Best score 679 bits
Score difference with first non-orthologous sequence - C.intestinalis:595 S.scrofa:550

F7AMH0              	100.00%		I3LTI2              	100.00%
Bootstrap support for F7AMH0 as seed ortholog is 100%.
Bootstrap support for I3LTI2 as seed ortholog is 100%.

Group of orthologs #637. Best score 678 bits
Score difference with first non-orthologous sequence - C.intestinalis:459 S.scrofa:678

H2Y2S2              	100.00%		F1RM47              	100.00%
Bootstrap support for H2Y2S2 as seed ortholog is 100%.
Bootstrap support for F1RM47 as seed ortholog is 100%.

Group of orthologs #638. Best score 678 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 S.scrofa:271

F6ZCE0              	100.00%		F1SUK2              	100.00%
Bootstrap support for F6ZCE0 as seed ortholog is 100%.
Bootstrap support for F1SUK2 as seed ortholog is 98%.

Group of orthologs #639. Best score 677 bits
Score difference with first non-orthologous sequence - C.intestinalis:677 S.scrofa:677

F7BQ30              	100.00%		F1RK45              	100.00%
Bootstrap support for F7BQ30 as seed ortholog is 100%.
Bootstrap support for F1RK45 as seed ortholog is 100%.

Group of orthologs #640. Best score 676 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.scrofa:98

F6VS92              	100.00%		I3LI77              	100.00%
F6RFT0              	48.15%		
H2XN22              	7.87%		
Bootstrap support for F6VS92 as seed ortholog is 99%.
Bootstrap support for I3LI77 as seed ortholog is 99%.

Group of orthologs #641. Best score 676 bits
Score difference with first non-orthologous sequence - C.intestinalis:676 S.scrofa:676

F6U2M6              	100.00%		F1RZ24              	100.00%
Bootstrap support for F6U2M6 as seed ortholog is 100%.
Bootstrap support for F1RZ24 as seed ortholog is 100%.

Group of orthologs #642. Best score 675 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:254

H2Y1L4              	100.00%		F1SH26              	100.00%
Bootstrap support for H2Y1L4 as seed ortholog is 99%.
Bootstrap support for F1SH26 as seed ortholog is 99%.

Group of orthologs #643. Best score 674 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.scrofa:520

F6TGD6              	100.00%		F1RRU7              	100.00%
                    	       		F1RPR9              	9.15%
                    	       		F1RWA3              	5.69%
Bootstrap support for F6TGD6 as seed ortholog is 99%.
Bootstrap support for F1RRU7 as seed ortholog is 100%.

Group of orthologs #644. Best score 674 bits
Score difference with first non-orthologous sequence - C.intestinalis:608 S.scrofa:61

F6R3V0              	100.00%		F1S4U9              	100.00%
                    	       		F1RPX2              	14.45%
Bootstrap support for F6R3V0 as seed ortholog is 100%.
Bootstrap support for F1S4U9 as seed ortholog is 87%.

Group of orthologs #645. Best score 674 bits
Score difference with first non-orthologous sequence - C.intestinalis:674 S.scrofa:674

H2XKW2              	100.00%		I3L655              	100.00%
Bootstrap support for H2XKW2 as seed ortholog is 100%.
Bootstrap support for I3L655 as seed ortholog is 100%.

Group of orthologs #646. Best score 672 bits
Score difference with first non-orthologous sequence - C.intestinalis:672 S.scrofa:672

F6ZY44              	100.00%		F1RGD9              	100.00%
                    	       		F1RGD8              	21.39%
Bootstrap support for F6ZY44 as seed ortholog is 100%.
Bootstrap support for F1RGD9 as seed ortholog is 100%.

Group of orthologs #647. Best score 672 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 S.scrofa:101

F6TSL2              	100.00%		I3LFE0              	100.00%
Bootstrap support for F6TSL2 as seed ortholog is 100%.
Bootstrap support for I3LFE0 as seed ortholog is 98%.

Group of orthologs #648. Best score 672 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 S.scrofa:295

F7AKC9              	100.00%		Q684M4              	100.00%
Bootstrap support for F7AKC9 as seed ortholog is 100%.
Bootstrap support for Q684M4 as seed ortholog is 100%.

Group of orthologs #649. Best score 671 bits
Score difference with first non-orthologous sequence - C.intestinalis:671 S.scrofa:671

F6TJ71              	100.00%		F1RUG0              	100.00%
Bootstrap support for F6TJ71 as seed ortholog is 100%.
Bootstrap support for F1RUG0 as seed ortholog is 100%.

Group of orthologs #650. Best score 671 bits
Score difference with first non-orthologous sequence - C.intestinalis:671 S.scrofa:671

F6X9E5              	100.00%		F1ST01              	100.00%
Bootstrap support for F6X9E5 as seed ortholog is 100%.
Bootstrap support for F1ST01 as seed ortholog is 100%.

Group of orthologs #651. Best score 670 bits
Score difference with first non-orthologous sequence - C.intestinalis:670 S.scrofa:670

F6SKU8              	100.00%		Q4FAT7              	100.00%
Bootstrap support for F6SKU8 as seed ortholog is 100%.
Bootstrap support for Q4FAT7 as seed ortholog is 100%.

Group of orthologs #652. Best score 670 bits
Score difference with first non-orthologous sequence - C.intestinalis:670 S.scrofa:240

F6YXZ3              	100.00%		Q29551              	100.00%
Bootstrap support for F6YXZ3 as seed ortholog is 100%.
Bootstrap support for Q29551 as seed ortholog is 100%.

Group of orthologs #653. Best score 669 bits
Score difference with first non-orthologous sequence - C.intestinalis:669 S.scrofa:669

F6SG33              	100.00%		K7GRB9              	100.00%
                    	       		F1RVC1              	66.23%
Bootstrap support for F6SG33 as seed ortholog is 100%.
Bootstrap support for K7GRB9 as seed ortholog is 100%.

Group of orthologs #654. Best score 669 bits
Score difference with first non-orthologous sequence - C.intestinalis:669 S.scrofa:669

F6Q8U3              	100.00%		F1RXP8              	100.00%
Bootstrap support for F6Q8U3 as seed ortholog is 100%.
Bootstrap support for F1RXP8 as seed ortholog is 100%.

Group of orthologs #655. Best score 669 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 S.scrofa:1

F6XBC5              	100.00%		B8Y466              	100.00%
Bootstrap support for F6XBC5 as seed ortholog is 100%.
Bootstrap support for B8Y466 as seed ortholog is 92%.

Group of orthologs #656. Best score 669 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:188

F6XCC4              	100.00%		I3LB93              	100.00%
Bootstrap support for F6XCC4 as seed ortholog is 80%.
Bootstrap support for I3LB93 as seed ortholog is 98%.

Group of orthologs #657. Best score 669 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.scrofa:669

F6ZF70              	100.00%		P33198              	100.00%
Bootstrap support for F6ZF70 as seed ortholog is 99%.
Bootstrap support for P33198 as seed ortholog is 100%.

Group of orthologs #658. Best score 668 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 S.scrofa:668

F6S6E8              	100.00%		I3LSP1              	100.00%
Bootstrap support for F6S6E8 as seed ortholog is 100%.
Bootstrap support for I3LSP1 as seed ortholog is 100%.

Group of orthologs #659. Best score 668 bits
Score difference with first non-orthologous sequence - C.intestinalis:668 S.scrofa:668

H2Y3A3              	100.00%		F1RZA9              	100.00%
Bootstrap support for H2Y3A3 as seed ortholog is 100%.
Bootstrap support for F1RZA9 as seed ortholog is 100%.

Group of orthologs #660. Best score 667 bits
Score difference with first non-orthologous sequence - C.intestinalis:667 S.scrofa:305

H2XPB4              	100.00%		F1RTU5              	100.00%
                    	       		F1SV93              	27.03%
                    	       		I3L9F7              	26.54%
Bootstrap support for H2XPB4 as seed ortholog is 100%.
Bootstrap support for F1RTU5 as seed ortholog is 100%.

Group of orthologs #661. Best score 667 bits
Score difference with first non-orthologous sequence - C.intestinalis:667 S.scrofa:667

H2Y3P6              	100.00%		F1RTI8              	100.00%
                    	       		F1SV41              	8.81%
Bootstrap support for H2Y3P6 as seed ortholog is 100%.
Bootstrap support for F1RTI8 as seed ortholog is 100%.

Group of orthologs #662. Best score 667 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 S.scrofa:323

F6UHH9              	100.00%		F1SKQ0              	100.00%
Bootstrap support for F6UHH9 as seed ortholog is 100%.
Bootstrap support for F1SKQ0 as seed ortholog is 100%.

Group of orthologs #663. Best score 667 bits
Score difference with first non-orthologous sequence - C.intestinalis:667 S.scrofa:667

F6PL95              	100.00%		P16276              	100.00%
Bootstrap support for F6PL95 as seed ortholog is 100%.
Bootstrap support for P16276 as seed ortholog is 100%.

Group of orthologs #664. Best score 666 bits
Score difference with first non-orthologous sequence - C.intestinalis:666 S.scrofa:666

F6ZWW6              	100.00%		F1S4K7              	100.00%
                    	       		I3L759              	32.04%
                    	       		F1SUR3              	11.17%
Bootstrap support for F6ZWW6 as seed ortholog is 100%.
Bootstrap support for F1S4K7 as seed ortholog is 100%.

Group of orthologs #665. Best score 666 bits
Score difference with first non-orthologous sequence - C.intestinalis:666 S.scrofa:599

F6WY47              	100.00%		F1S359              	100.00%
Bootstrap support for F6WY47 as seed ortholog is 100%.
Bootstrap support for F1S359 as seed ortholog is 100%.

Group of orthologs #666. Best score 665 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.scrofa:135

Q4H2T5              	100.00%		P84024              	100.00%
                    	       		F1RPR3              	65.96%
                    	       		F1SJJ0              	41.70%
Bootstrap support for Q4H2T5 as seed ortholog is 99%.
Bootstrap support for P84024 as seed ortholog is 99%.

Group of orthologs #667. Best score 665 bits
Score difference with first non-orthologous sequence - C.intestinalis:665 S.scrofa:665

F6WNE0              	100.00%		F1SRM1              	100.00%
Bootstrap support for F6WNE0 as seed ortholog is 100%.
Bootstrap support for F1SRM1 as seed ortholog is 100%.

Group of orthologs #668. Best score 665 bits
Score difference with first non-orthologous sequence - C.intestinalis:665 S.scrofa:665

F6T6E4              	100.00%		I3LVG1              	100.00%
Bootstrap support for F6T6E4 as seed ortholog is 100%.
Bootstrap support for I3LVG1 as seed ortholog is 100%.

Group of orthologs #669. Best score 664 bits
Score difference with first non-orthologous sequence - C.intestinalis:664 S.scrofa:348

F7ACB9              	100.00%		F1RLF9              	100.00%
                    	       		P58392              	22.76%
                    	       		F1S923              	6.45%
Bootstrap support for F7ACB9 as seed ortholog is 100%.
Bootstrap support for F1RLF9 as seed ortholog is 100%.

Group of orthologs #670. Best score 664 bits
Score difference with first non-orthologous sequence - C.intestinalis:664 S.scrofa:211

F6RCR9              	100.00%		Q28948              	100.00%
                    	       		F1SMJ3              	25.71%
Bootstrap support for F6RCR9 as seed ortholog is 100%.
Bootstrap support for Q28948 as seed ortholog is 100%.

Group of orthologs #671. Best score 664 bits
Score difference with first non-orthologous sequence - C.intestinalis:551 S.scrofa:664

H2XXJ0              	100.00%		F1SSI4              	100.00%
Bootstrap support for H2XXJ0 as seed ortholog is 100%.
Bootstrap support for F1SSI4 as seed ortholog is 100%.

Group of orthologs #672. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 S.scrofa:129

F6TXB9              	100.00%		F1SEK8              	100.00%
F6XP43              	28.52%		A1Y2K1              	16.05%
Bootstrap support for F6TXB9 as seed ortholog is 100%.
Bootstrap support for F1SEK8 as seed ortholog is 99%.

Group of orthologs #673. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:663 S.scrofa:663

F6U465              	100.00%		F1RLS2              	100.00%
                    	       		F1RHK2              	30.27%
Bootstrap support for F6U465 as seed ortholog is 100%.
Bootstrap support for F1RLS2 as seed ortholog is 100%.

Group of orthologs #674. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.scrofa:20

F6XTN6              	100.00%		F1RN70              	100.00%
Bootstrap support for F6XTN6 as seed ortholog is 99%.
Bootstrap support for F1RN70 as seed ortholog is 66%.
Alternative seed ortholog is F1RF13 (20 bits away from this cluster)

Group of orthologs #675. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:663 S.scrofa:663

F6YT91              	100.00%		F1RY04              	100.00%
Bootstrap support for F6YT91 as seed ortholog is 100%.
Bootstrap support for F1RY04 as seed ortholog is 100%.

Group of orthologs #676. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:663 S.scrofa:542

F6ZTU7              	100.00%		F1SBK5              	100.00%
Bootstrap support for F6ZTU7 as seed ortholog is 100%.
Bootstrap support for F1SBK5 as seed ortholog is 100%.

Group of orthologs #677. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:663 S.scrofa:663

F6Z6H7              	100.00%		I3LC91              	100.00%
Bootstrap support for F6Z6H7 as seed ortholog is 100%.
Bootstrap support for I3LC91 as seed ortholog is 100%.

Group of orthologs #678. Best score 662 bits
Score difference with first non-orthologous sequence - C.intestinalis:662 S.scrofa:231

F6S2V8              	100.00%		F1S899              	100.00%
                    	       		F1SDK2              	30.11%
                    	       		F2Z510              	29.26%
Bootstrap support for F6S2V8 as seed ortholog is 100%.
Bootstrap support for F1S899 as seed ortholog is 99%.

Group of orthologs #679. Best score 661 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.scrofa:661

F6XG08              	100.00%		P48319              	100.00%
                    	       		P48321              	23.10%
Bootstrap support for F6XG08 as seed ortholog is 100%.
Bootstrap support for P48319 as seed ortholog is 100%.

Group of orthologs #680. Best score 661 bits
Score difference with first non-orthologous sequence - C.intestinalis:661 S.scrofa:661

F7ABK2              	100.00%		F1SKT5              	100.00%
Bootstrap support for F7ABK2 as seed ortholog is 100%.
Bootstrap support for F1SKT5 as seed ortholog is 100%.

Group of orthologs #681. Best score 661 bits
Score difference with first non-orthologous sequence - C.intestinalis:661 S.scrofa:661

H2Y3N1              	100.00%		F1RN73              	100.00%
Bootstrap support for H2Y3N1 as seed ortholog is 100%.
Bootstrap support for F1RN73 as seed ortholog is 100%.

Group of orthologs #682. Best score 661 bits
Score difference with first non-orthologous sequence - C.intestinalis:661 S.scrofa:661

Q4H372              	100.00%		F1RPX1              	100.00%
Bootstrap support for Q4H372 as seed ortholog is 100%.
Bootstrap support for F1RPX1 as seed ortholog is 100%.

Group of orthologs #683. Best score 660 bits
Score difference with first non-orthologous sequence - C.intestinalis:660 S.scrofa:660

F6SKI3              	100.00%		F1RSQ5              	100.00%
                    	       		F1RWY2              	23.42%
Bootstrap support for F6SKI3 as seed ortholog is 100%.
Bootstrap support for F1RSQ5 as seed ortholog is 100%.

Group of orthologs #684. Best score 660 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 S.scrofa:660

F6PHI7              	100.00%		F1SR91              	100.00%
Bootstrap support for F6PHI7 as seed ortholog is 99%.
Bootstrap support for F1SR91 as seed ortholog is 100%.

Group of orthologs #685. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 S.scrofa:397

F6PSM8              	100.00%		F1S8X0              	100.00%
                    	       		I3LMQ9              	19.29%
                    	       		F1SNV7              	14.18%
Bootstrap support for F6PSM8 as seed ortholog is 100%.
Bootstrap support for F1S8X0 as seed ortholog is 100%.

Group of orthologs #686. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 S.scrofa:214

F6YGC1              	100.00%		I3LQ10              	100.00%
Bootstrap support for F6YGC1 as seed ortholog is 100%.
Bootstrap support for I3LQ10 as seed ortholog is 100%.

Group of orthologs #687. Best score 658 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 S.scrofa:658

F6PJX3              	100.00%		F1RU69              	100.00%
                    	       		Q767M3              	100.00%
Bootstrap support for F6PJX3 as seed ortholog is 41%.
Alternative seed ortholog is F6Q9K0 (23 bits away from this cluster)
Bootstrap support for F1RU69 as seed ortholog is 100%.
Bootstrap support for Q767M3 as seed ortholog is 100%.

Group of orthologs #688. Best score 658 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 S.scrofa:458

F7B898              	100.00%		F1SAJ5              	100.00%
Bootstrap support for F7B898 as seed ortholog is 100%.
Bootstrap support for F1SAJ5 as seed ortholog is 100%.

Group of orthologs #689. Best score 658 bits
Score difference with first non-orthologous sequence - C.intestinalis:658 S.scrofa:452

F6UHT2              	100.00%		I3LLE3              	100.00%
Bootstrap support for F6UHT2 as seed ortholog is 100%.
Bootstrap support for I3LLE3 as seed ortholog is 100%.

Group of orthologs #690. Best score 657 bits
Score difference with first non-orthologous sequence - C.intestinalis:657 S.scrofa:657

F6UQL0              	100.00%		F1RL00              	100.00%
Bootstrap support for F6UQL0 as seed ortholog is 100%.
Bootstrap support for F1RL00 as seed ortholog is 100%.

Group of orthologs #691. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 S.scrofa:584

F7ACS2              	100.00%		F1RIY1              	100.00%
Bootstrap support for F7ACS2 as seed ortholog is 100%.
Bootstrap support for F1RIY1 as seed ortholog is 100%.

Group of orthologs #692. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 S.scrofa:656

F7ADW3              	100.00%		F1RXU7              	100.00%
Bootstrap support for F7ADW3 as seed ortholog is 100%.
Bootstrap support for F1RXU7 as seed ortholog is 100%.

Group of orthologs #693. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 S.scrofa:656

F6WYI9              	100.00%		F1SQG5              	100.00%
Bootstrap support for F6WYI9 as seed ortholog is 100%.
Bootstrap support for F1SQG5 as seed ortholog is 100%.

Group of orthologs #694. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 S.scrofa:656

F6UXH9              	100.00%		I3LBE6              	100.00%
Bootstrap support for F6UXH9 as seed ortholog is 100%.
Bootstrap support for I3LBE6 as seed ortholog is 100%.

Group of orthologs #695. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 S.scrofa:412

F6S8N9              	100.00%		Q8WNQ7              	100.00%
Bootstrap support for F6S8N9 as seed ortholog is 100%.
Bootstrap support for Q8WNQ7 as seed ortholog is 100%.

Group of orthologs #696. Best score 654 bits
Score difference with first non-orthologous sequence - C.intestinalis:654 S.scrofa:654

F6YNT4              	100.00%		F1RK53              	100.00%
Bootstrap support for F6YNT4 as seed ortholog is 100%.
Bootstrap support for F1RK53 as seed ortholog is 100%.

Group of orthologs #697. Best score 654 bits
Score difference with first non-orthologous sequence - C.intestinalis:654 S.scrofa:654

C4B8W8              	100.00%		F1SLY1              	100.00%
Bootstrap support for C4B8W8 as seed ortholog is 100%.
Bootstrap support for F1SLY1 as seed ortholog is 100%.

Group of orthologs #698. Best score 654 bits
Score difference with first non-orthologous sequence - C.intestinalis:654 S.scrofa:654

F6QY24              	100.00%		I3LBY0              	100.00%
Bootstrap support for F6QY24 as seed ortholog is 100%.
Bootstrap support for I3LBY0 as seed ortholog is 100%.

Group of orthologs #699. Best score 654 bits
Score difference with first non-orthologous sequence - C.intestinalis:654 S.scrofa:654

Q1RLD5              	100.00%		F1RR54              	100.00%
Bootstrap support for Q1RLD5 as seed ortholog is 100%.
Bootstrap support for F1RR54 as seed ortholog is 100%.

Group of orthologs #700. Best score 654 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 S.scrofa:119

Q8T3S5              	100.00%		F2Z5I5              	100.00%
Bootstrap support for Q8T3S5 as seed ortholog is 100%.
Bootstrap support for F2Z5I5 as seed ortholog is 100%.

Group of orthologs #701. Best score 653 bits
Score difference with first non-orthologous sequence - C.intestinalis:653 S.scrofa:578

Q1RLA7              	100.00%		F1RGQ6              	100.00%
Bootstrap support for Q1RLA7 as seed ortholog is 100%.
Bootstrap support for F1RGQ6 as seed ortholog is 100%.

Group of orthologs #702. Best score 652 bits
Score difference with first non-orthologous sequence - C.intestinalis:652 S.scrofa:652

H2XJK0              	100.00%		F1SQL7              	100.00%
                    	       		I3L6F0              	22.42%
                    	       		I3LRR6              	12.71%
Bootstrap support for H2XJK0 as seed ortholog is 100%.
Bootstrap support for F1SQL7 as seed ortholog is 100%.

Group of orthologs #703. Best score 651 bits
Score difference with first non-orthologous sequence - C.intestinalis:585 S.scrofa:651

H2Y107              	100.00%		I3LGN9              	100.00%
Bootstrap support for H2Y107 as seed ortholog is 100%.
Bootstrap support for I3LGN9 as seed ortholog is 100%.

Group of orthologs #704. Best score 651 bits
Score difference with first non-orthologous sequence - C.intestinalis:651 S.scrofa:344

Q32TF6              	100.00%		K7GSU4              	100.00%
Bootstrap support for Q32TF6 as seed ortholog is 100%.
Bootstrap support for K7GSU4 as seed ortholog is 100%.

Group of orthologs #705. Best score 650 bits
Score difference with first non-orthologous sequence - C.intestinalis:650 S.scrofa:650

F6RDK2              	100.00%		F1RPU7              	100.00%
                    	       		F1RVL8              	13.49%
Bootstrap support for F6RDK2 as seed ortholog is 100%.
Bootstrap support for F1RPU7 as seed ortholog is 100%.

Group of orthologs #706. Best score 650 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 S.scrofa:275

F6R2Y1              	100.00%		F1RWM5              	100.00%
Bootstrap support for F6R2Y1 as seed ortholog is 100%.
Bootstrap support for F1RWM5 as seed ortholog is 99%.

Group of orthologs #707. Best score 650 bits
Score difference with first non-orthologous sequence - C.intestinalis:650 S.scrofa:546

H2Y130              	100.00%		F1SDG5              	100.00%
Bootstrap support for H2Y130 as seed ortholog is 100%.
Bootstrap support for F1SDG5 as seed ortholog is 100%.

Group of orthologs #708. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:649 S.scrofa:649

F7BL51              	100.00%		D2KPI8              	100.00%
Bootstrap support for F7BL51 as seed ortholog is 100%.
Bootstrap support for D2KPI8 as seed ortholog is 100%.

Group of orthologs #709. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:649 S.scrofa:649

F6Y3K6              	100.00%		F1S680              	100.00%
Bootstrap support for F6Y3K6 as seed ortholog is 100%.
Bootstrap support for F1S680 as seed ortholog is 100%.

Group of orthologs #710. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.scrofa:129

F6Y9W3              	100.00%		F1SFY9              	100.00%
Bootstrap support for F6Y9W3 as seed ortholog is 99%.
Bootstrap support for F1SFY9 as seed ortholog is 99%.

Group of orthologs #711. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:649 S.scrofa:535

F6VTM3              	100.00%		I3LEQ0              	100.00%
Bootstrap support for F6VTM3 as seed ortholog is 100%.
Bootstrap support for I3LEQ0 as seed ortholog is 100%.

Group of orthologs #712. Best score 648 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 S.scrofa:418

F6Q0M2              	100.00%		I3LN61              	100.00%
                    	       		F1RY93              	43.62%
Bootstrap support for F6Q0M2 as seed ortholog is 100%.
Bootstrap support for I3LN61 as seed ortholog is 100%.

Group of orthologs #713. Best score 648 bits
Score difference with first non-orthologous sequence - C.intestinalis:648 S.scrofa:413

F6YC60              	100.00%		F1RJC5              	100.00%
Bootstrap support for F6YC60 as seed ortholog is 100%.
Bootstrap support for F1RJC5 as seed ortholog is 100%.

Group of orthologs #714. Best score 647 bits
Score difference with first non-orthologous sequence - C.intestinalis:647 S.scrofa:647

F6XK22              	100.00%		K7N7E7              	100.00%
Bootstrap support for F6XK22 as seed ortholog is 100%.
Bootstrap support for K7N7E7 as seed ortholog is 100%.

Group of orthologs #715. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 S.scrofa:646

F6YNG6              	100.00%		C3RZ98              	100.00%
Bootstrap support for F6YNG6 as seed ortholog is 100%.
Bootstrap support for C3RZ98 as seed ortholog is 100%.

Group of orthologs #716. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 S.scrofa:646

F6SHG8              	100.00%		F1S1A8              	100.00%
Bootstrap support for F6SHG8 as seed ortholog is 100%.
Bootstrap support for F1S1A8 as seed ortholog is 100%.

Group of orthologs #717. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:551 S.scrofa:646

F7A912              	100.00%		F1RYL9              	100.00%
Bootstrap support for F7A912 as seed ortholog is 100%.
Bootstrap support for F1RYL9 as seed ortholog is 100%.

Group of orthologs #718. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 S.scrofa:596

F6Z0E0              	100.00%		F2Z564              	100.00%
Bootstrap support for F6Z0E0 as seed ortholog is 100%.
Bootstrap support for F2Z564 as seed ortholog is 100%.

Group of orthologs #719. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 S.scrofa:30

Q9NL43              	100.00%		F1SPD2              	100.00%
Bootstrap support for Q9NL43 as seed ortholog is 100%.
Bootstrap support for F1SPD2 as seed ortholog is 86%.

Group of orthologs #720. Best score 645 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 S.scrofa:166

F6U2S1              	100.00%		I3LQT3              	100.00%
                    	       		F1SU04              	29.29%
Bootstrap support for F6U2S1 as seed ortholog is 100%.
Bootstrap support for I3LQT3 as seed ortholog is 99%.

Group of orthologs #721. Best score 645 bits
Score difference with first non-orthologous sequence - C.intestinalis:645 S.scrofa:645

C4B8X4              	100.00%		I3L7G2              	100.00%
Bootstrap support for C4B8X4 as seed ortholog is 100%.
Bootstrap support for I3L7G2 as seed ortholog is 100%.

Group of orthologs #722. Best score 644 bits
Score difference with first non-orthologous sequence - C.intestinalis:644 S.scrofa:644

F7A0P7              	100.00%		F1S1U4              	100.00%
                    	       		F1RRU6              	43.90%
Bootstrap support for F7A0P7 as seed ortholog is 100%.
Bootstrap support for F1S1U4 as seed ortholog is 100%.

Group of orthologs #723. Best score 644 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 S.scrofa:644

F6ZBI9              	100.00%		F1SAY6              	100.00%
                    	       		O02773              	23.30%
Bootstrap support for F6ZBI9 as seed ortholog is 100%.
Bootstrap support for F1SAY6 as seed ortholog is 100%.

Group of orthologs #724. Best score 644 bits
Score difference with first non-orthologous sequence - C.intestinalis:644 S.scrofa:205

F6XCK4              	100.00%		Q710C4              	100.00%
Bootstrap support for F6XCK4 as seed ortholog is 100%.
Bootstrap support for Q710C4 as seed ortholog is 100%.

Group of orthologs #725. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 S.scrofa:366

F6TMJ9              	100.00%		A6M930              	100.00%
                    	       		A6M928              	56.63%
                    	       		I3LLD5              	40.96%
Bootstrap support for F6TMJ9 as seed ortholog is 100%.
Bootstrap support for A6M930 as seed ortholog is 100%.

Group of orthologs #726. Best score 642 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 S.scrofa:146

F6W6I5              	100.00%		Q95266              	100.00%
                    	       		Q7JFN2              	54.19%
                    	       		F1RL74              	24.35%
Bootstrap support for F6W6I5 as seed ortholog is 100%.
Bootstrap support for Q95266 as seed ortholog is 99%.

Group of orthologs #727. Best score 641 bits
Score difference with first non-orthologous sequence - C.intestinalis:641 S.scrofa:641

F6WUP4              	100.00%		F1RJS6              	100.00%
Bootstrap support for F6WUP4 as seed ortholog is 100%.
Bootstrap support for F1RJS6 as seed ortholog is 100%.

Group of orthologs #728. Best score 641 bits
Score difference with first non-orthologous sequence - C.intestinalis:641 S.scrofa:641

F6UF05              	100.00%		F1SD97              	100.00%
Bootstrap support for F6UF05 as seed ortholog is 100%.
Bootstrap support for F1SD97 as seed ortholog is 100%.

Group of orthologs #729. Best score 639 bits
Score difference with first non-orthologous sequence - C.intestinalis:639 S.scrofa:639

H2XZM0              	100.00%		F1RG65              	100.00%
Bootstrap support for H2XZM0 as seed ortholog is 100%.
Bootstrap support for F1RG65 as seed ortholog is 100%.

Group of orthologs #730. Best score 639 bits
Score difference with first non-orthologous sequence - C.intestinalis:639 S.scrofa:639

H2XR85              	100.00%		F1S6W7              	100.00%
Bootstrap support for H2XR85 as seed ortholog is 100%.
Bootstrap support for F1S6W7 as seed ortholog is 100%.

Group of orthologs #731. Best score 639 bits
Score difference with first non-orthologous sequence - C.intestinalis:639 S.scrofa:639

F6Y5C7              	100.00%		I3LTZ3              	100.00%
Bootstrap support for F6Y5C7 as seed ortholog is 100%.
Bootstrap support for I3LTZ3 as seed ortholog is 100%.

Group of orthologs #732. Best score 639 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 S.scrofa:476

H2XLI2              	100.00%		Q9GL51              	100.00%
Bootstrap support for H2XLI2 as seed ortholog is 100%.
Bootstrap support for Q9GL51 as seed ortholog is 100%.

Group of orthologs #733. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 S.scrofa:304

F6S4F7              	100.00%		F1S8M5              	100.00%
                    	       		G9BWQ2              	39.55%
Bootstrap support for F6S4F7 as seed ortholog is 100%.
Bootstrap support for F1S8M5 as seed ortholog is 100%.

Group of orthologs #734. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:638 S.scrofa:358

F6ZRQ5              	100.00%		I3LG81              	100.00%
                    	       		F1SIK7              	42.00%
Bootstrap support for F6ZRQ5 as seed ortholog is 100%.
Bootstrap support for I3LG81 as seed ortholog is 100%.

Group of orthologs #735. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 S.scrofa:461

F6TWF6              	100.00%		F1RKM1              	100.00%
Bootstrap support for F6TWF6 as seed ortholog is 100%.
Bootstrap support for F1RKM1 as seed ortholog is 100%.

Group of orthologs #736. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 S.scrofa:247

F6PPJ1              	100.00%		F1SH28              	100.00%
Bootstrap support for F6PPJ1 as seed ortholog is 100%.
Bootstrap support for F1SH28 as seed ortholog is 100%.

Group of orthologs #737. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 S.scrofa:232

F6QWQ4              	100.00%		F1SJT0              	100.00%
Bootstrap support for F6QWQ4 as seed ortholog is 99%.
Bootstrap support for F1SJT0 as seed ortholog is 99%.

Group of orthologs #738. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:638 S.scrofa:638

F6YX67              	100.00%		F1SFQ0              	100.00%
Bootstrap support for F6YX67 as seed ortholog is 100%.
Bootstrap support for F1SFQ0 as seed ortholog is 100%.

Group of orthologs #739. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:637 S.scrofa:122

F6V5P8              	100.00%		F1RYS5              	100.00%
                    	       		K7GKL7              	30.84%
                    	       		F1RJU9              	18.06%
Bootstrap support for F6V5P8 as seed ortholog is 100%.
Bootstrap support for F1RYS5 as seed ortholog is 100%.

Group of orthologs #740. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:637 S.scrofa:637

H2XYE1              	100.00%		F1SIX5              	100.00%
                    	       		F1RUD4              	13.85%
Bootstrap support for H2XYE1 as seed ortholog is 100%.
Bootstrap support for F1SIX5 as seed ortholog is 100%.

Group of orthologs #741. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:637 S.scrofa:637

F6XBA5              	100.00%		F1S7E5              	100.00%
Bootstrap support for F6XBA5 as seed ortholog is 100%.
Bootstrap support for F1S7E5 as seed ortholog is 100%.

Group of orthologs #742. Best score 636 bits
Score difference with first non-orthologous sequence - C.intestinalis:636 S.scrofa:636

Q1RL77              	100.00%		F1S2E4              	100.00%
                    	       		I3LDU8              	58.61%
                    	       		I3LA30              	27.04%
Bootstrap support for Q1RL77 as seed ortholog is 100%.
Bootstrap support for F1S2E4 as seed ortholog is 100%.

Group of orthologs #743. Best score 636 bits
Score difference with first non-orthologous sequence - C.intestinalis:636 S.scrofa:636

F6S8S3              	100.00%		F1SKN5              	100.00%
Bootstrap support for F6S8S3 as seed ortholog is 100%.
Bootstrap support for F1SKN5 as seed ortholog is 100%.

Group of orthologs #744. Best score 636 bits
Score difference with first non-orthologous sequence - C.intestinalis:636 S.scrofa:636

F7B7H5              	100.00%		O62839              	100.00%
Bootstrap support for F7B7H5 as seed ortholog is 100%.
Bootstrap support for O62839 as seed ortholog is 100%.

Group of orthologs #745. Best score 634 bits
Score difference with first non-orthologous sequence - C.intestinalis:634 S.scrofa:634

F6SVI8              	100.00%		F1S4V3              	100.00%
                    	       		F1RMC0              	6.30%
Bootstrap support for F6SVI8 as seed ortholog is 100%.
Bootstrap support for F1S4V3 as seed ortholog is 100%.

Group of orthologs #746. Best score 634 bits
Score difference with first non-orthologous sequence - C.intestinalis:634 S.scrofa:498

F6SMZ6              	100.00%		F1S0H9              	100.00%
Bootstrap support for F6SMZ6 as seed ortholog is 100%.
Bootstrap support for F1S0H9 as seed ortholog is 100%.

Group of orthologs #747. Best score 634 bits
Score difference with first non-orthologous sequence - C.intestinalis:634 S.scrofa:158

F7AU99              	100.00%		F1RF11              	100.00%
Bootstrap support for F7AU99 as seed ortholog is 100%.
Bootstrap support for F1RF11 as seed ortholog is 99%.

Group of orthologs #748. Best score 634 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:185

F6ZXE7              	100.00%		F1SGA5              	100.00%
Bootstrap support for F6ZXE7 as seed ortholog is 100%.
Bootstrap support for F1SGA5 as seed ortholog is 100%.

Group of orthologs #749. Best score 634 bits
Score difference with first non-orthologous sequence - C.intestinalis:634 S.scrofa:634

H2XTT5              	100.00%		F1SGK8              	100.00%
Bootstrap support for H2XTT5 as seed ortholog is 100%.
Bootstrap support for F1SGK8 as seed ortholog is 100%.

Group of orthologs #750. Best score 634 bits
Score difference with first non-orthologous sequence - C.intestinalis:634 S.scrofa:634

Q1RLG4              	100.00%		F1SBU5              	100.00%
Bootstrap support for Q1RLG4 as seed ortholog is 100%.
Bootstrap support for F1SBU5 as seed ortholog is 100%.

Group of orthologs #751. Best score 633 bits
Score difference with first non-orthologous sequence - C.intestinalis:633 S.scrofa:477

F7BNL5              	100.00%		F1RU06              	100.00%
                    	       		F1SBF1              	14.14%
Bootstrap support for F7BNL5 as seed ortholog is 100%.
Bootstrap support for F1RU06 as seed ortholog is 100%.

Group of orthologs #752. Best score 632 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 S.scrofa:580

F6RKQ2              	100.00%		B2CCY7              	100.00%
Bootstrap support for F6RKQ2 as seed ortholog is 100%.
Bootstrap support for B2CCY7 as seed ortholog is 100%.

Group of orthologs #753. Best score 632 bits
Score difference with first non-orthologous sequence - C.intestinalis:632 S.scrofa:632

F6XKA2              	100.00%		F1S0R7              	100.00%
Bootstrap support for F6XKA2 as seed ortholog is 100%.
Bootstrap support for F1S0R7 as seed ortholog is 100%.

Group of orthologs #754. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 S.scrofa:104

F6XNT2              	100.00%		F1RXD5              	100.00%
                    	       		F1S4V8              	26.91%
Bootstrap support for F6XNT2 as seed ortholog is 70%.
Alternative seed ortholog is F6WS10 (20 bits away from this cluster)
Bootstrap support for F1RXD5 as seed ortholog is 99%.

Group of orthologs #755. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 S.scrofa:631

H2Y1W2              	100.00%		F1SA37              	100.00%
                    	       		I3LFD9              	22.78%
Bootstrap support for H2Y1W2 as seed ortholog is 100%.
Bootstrap support for F1SA37 as seed ortholog is 100%.

Group of orthologs #756. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 S.scrofa:78

F6SZE1              	100.00%		F1RZJ5              	100.00%
Bootstrap support for F6SZE1 as seed ortholog is 100%.
Bootstrap support for F1RZJ5 as seed ortholog is 92%.

Group of orthologs #757. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 S.scrofa:345

F6VZ84              	100.00%		F1S848              	100.00%
Bootstrap support for F6VZ84 as seed ortholog is 100%.
Bootstrap support for F1S848 as seed ortholog is 100%.

Group of orthologs #758. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.scrofa:169

F6SDI7              	100.00%		F1SKP7              	100.00%
Bootstrap support for F6SDI7 as seed ortholog is 100%.
Bootstrap support for F1SKP7 as seed ortholog is 100%.

Group of orthologs #759. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 S.scrofa:631

H2XWZ3              	100.00%		F1RSJ8              	100.00%
Bootstrap support for H2XWZ3 as seed ortholog is 100%.
Bootstrap support for F1RSJ8 as seed ortholog is 100%.

Group of orthologs #760. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 S.scrofa:631

F6V4K8              	100.00%		I3L908              	100.00%
Bootstrap support for F6V4K8 as seed ortholog is 100%.
Bootstrap support for I3L908 as seed ortholog is 100%.

Group of orthologs #761. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 S.scrofa:503

F7A5V7              	100.00%		I3LUN6              	100.00%
Bootstrap support for F7A5V7 as seed ortholog is 100%.
Bootstrap support for I3LUN6 as seed ortholog is 100%.

Group of orthologs #762. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:630 S.scrofa:219

F6VAT4              	100.00%		K7GMQ7              	100.00%
                    	       		P52649              	67.20%
                    	       		F1S1M0              	7.53%
Bootstrap support for F6VAT4 as seed ortholog is 100%.
Bootstrap support for K7GMQ7 as seed ortholog is 99%.

Group of orthologs #763. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:630 S.scrofa:630

H2XXL7              	100.00%		I3LB64              	100.00%
                    	       		F1S895              	96.72%
Bootstrap support for H2XXL7 as seed ortholog is 100%.
Bootstrap support for I3LB64 as seed ortholog is 100%.

Group of orthologs #764. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:630

H2XQ18              	100.00%		F1ST22              	100.00%
Bootstrap support for H2XQ18 as seed ortholog is 98%.
Bootstrap support for F1ST22 as seed ortholog is 100%.

Group of orthologs #765. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:630 S.scrofa:542

H2XZU8              	100.00%		I3LS52              	100.00%
Bootstrap support for H2XZU8 as seed ortholog is 100%.
Bootstrap support for I3LS52 as seed ortholog is 100%.

Group of orthologs #766. Best score 629 bits
Score difference with first non-orthologous sequence - C.intestinalis:629 S.scrofa:629

F6UJ17              	100.00%		I3LQD7              	100.00%
                    	       		F1S819              	11.11%
Bootstrap support for F6UJ17 as seed ortholog is 100%.
Bootstrap support for I3LQD7 as seed ortholog is 100%.

Group of orthologs #767. Best score 629 bits
Score difference with first non-orthologous sequence - C.intestinalis:629 S.scrofa:629

F6TZ29              	100.00%		F1SQA6              	100.00%
Bootstrap support for F6TZ29 as seed ortholog is 100%.
Bootstrap support for F1SQA6 as seed ortholog is 100%.

Group of orthologs #768. Best score 629 bits
Score difference with first non-orthologous sequence - C.intestinalis:629 S.scrofa:272

H2XZY0              	100.00%		F1RIR8              	100.00%
Bootstrap support for H2XZY0 as seed ortholog is 100%.
Bootstrap support for F1RIR8 as seed ortholog is 100%.

Group of orthologs #769. Best score 629 bits
Score difference with first non-orthologous sequence - C.intestinalis:629 S.scrofa:629

F7AGW4              	100.00%		F1SGN4              	100.00%
Bootstrap support for F7AGW4 as seed ortholog is 100%.
Bootstrap support for F1SGN4 as seed ortholog is 100%.

Group of orthologs #770. Best score 629 bits
Score difference with first non-orthologous sequence - C.intestinalis:629 S.scrofa:629

F6UF57              	100.00%		I3LT92              	100.00%
Bootstrap support for F6UF57 as seed ortholog is 100%.
Bootstrap support for I3LT92 as seed ortholog is 100%.

Group of orthologs #771. Best score 629 bits
Score difference with first non-orthologous sequence - C.intestinalis:629 S.scrofa:629

H2Y2K4              	100.00%		Q1W675              	100.00%
Bootstrap support for H2Y2K4 as seed ortholog is 100%.
Bootstrap support for Q1W675 as seed ortholog is 100%.

Group of orthologs #772. Best score 628 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 S.scrofa:80

F6YCG7              	100.00%		F1SPN5              	100.00%
                    	       		I3L9P4              	39.04%
                    	       		I3L6Q9              	38.80%
Bootstrap support for F6YCG7 as seed ortholog is 99%.
Bootstrap support for F1SPN5 as seed ortholog is 85%.

Group of orthologs #773. Best score 628 bits
Score difference with first non-orthologous sequence - C.intestinalis:628 S.scrofa:514

F6UGF1              	100.00%		F1RWL3              	100.00%
                    	       		F1SSC2              	12.65%
Bootstrap support for F6UGF1 as seed ortholog is 100%.
Bootstrap support for F1RWL3 as seed ortholog is 100%.

Group of orthologs #774. Best score 628 bits
Score difference with first non-orthologous sequence - C.intestinalis:628 S.scrofa:628

F7BHR3              	100.00%		I3LI05              	100.00%
Bootstrap support for F7BHR3 as seed ortholog is 100%.
Bootstrap support for I3LI05 as seed ortholog is 100%.

Group of orthologs #775. Best score 627 bits
Score difference with first non-orthologous sequence - C.intestinalis:627 S.scrofa:627

F6ZGD4              	100.00%		F1SSU6              	100.00%
Bootstrap support for F6ZGD4 as seed ortholog is 100%.
Bootstrap support for F1SSU6 as seed ortholog is 100%.

Group of orthologs #776. Best score 626 bits
Score difference with first non-orthologous sequence - C.intestinalis:626 S.scrofa:210

F6XZ93              	100.00%		Q1KYT0              	100.00%
                    	       		I3LCN1              	37.39%
Bootstrap support for F6XZ93 as seed ortholog is 100%.
Bootstrap support for Q1KYT0 as seed ortholog is 100%.

Group of orthologs #777. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.scrofa:407

F6X753              	100.00%		Q8MIB3              	100.00%
                    	       		F1RW52              	98.36%
                    	       		K7GKB4              	33.28%
Bootstrap support for F6X753 as seed ortholog is 98%.
Bootstrap support for Q8MIB3 as seed ortholog is 100%.

Group of orthologs #778. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:580 S.scrofa:455

F6UNP2              	100.00%		Q5H7B9              	100.00%
                    	       		F6Q504              	33.16%
Bootstrap support for F6UNP2 as seed ortholog is 100%.
Bootstrap support for Q5H7B9 as seed ortholog is 100%.

Group of orthologs #779. Best score 624 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 S.scrofa:372

F6R6X6              	100.00%		F1SFZ2              	100.00%
                    	       		F1RHZ7              	49.03%
Bootstrap support for F6R6X6 as seed ortholog is 100%.
Bootstrap support for F1SFZ2 as seed ortholog is 100%.

Group of orthologs #780. Best score 624 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 S.scrofa:343

F6UJS3              	100.00%		F1RWW3              	100.00%
Bootstrap support for F6UJS3 as seed ortholog is 100%.
Bootstrap support for F1RWW3 as seed ortholog is 100%.

Group of orthologs #781. Best score 624 bits
Score difference with first non-orthologous sequence - C.intestinalis:624 S.scrofa:624

H2XL40              	100.00%		F1RS41              	100.00%
Bootstrap support for H2XL40 as seed ortholog is 100%.
Bootstrap support for F1RS41 as seed ortholog is 100%.

Group of orthologs #782. Best score 624 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 S.scrofa:13

F6XIK7              	100.00%		I3L916              	100.00%
Bootstrap support for F6XIK7 as seed ortholog is 100%.
Bootstrap support for I3L916 as seed ortholog is 38%.
Alternative seed ortholog is I3LKA3 (13 bits away from this cluster)

Group of orthologs #783. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:623 S.scrofa:437

F6X882              	100.00%		F1SVC8              	100.00%
                    	       		F1RH75              	25.10%
                    	       		F1SUK0              	8.46%
Bootstrap support for F6X882 as seed ortholog is 100%.
Bootstrap support for F1SVC8 as seed ortholog is 100%.

Group of orthologs #784. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:623 S.scrofa:423

F6XQD4              	100.00%		F1RFM9              	100.00%
Bootstrap support for F6XQD4 as seed ortholog is 100%.
Bootstrap support for F1RFM9 as seed ortholog is 100%.

Group of orthologs #785. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:623 S.scrofa:623

F6WN54              	100.00%		F1S0D4              	100.00%
Bootstrap support for F6WN54 as seed ortholog is 100%.
Bootstrap support for F1S0D4 as seed ortholog is 100%.

Group of orthologs #786. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 S.scrofa:623

H2XLM6              	100.00%		A5GFT5              	100.00%
Bootstrap support for H2XLM6 as seed ortholog is 100%.
Bootstrap support for A5GFT5 as seed ortholog is 100%.

Group of orthologs #787. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:623 S.scrofa:623

F7AER5              	100.00%		F1S4I0              	100.00%
Bootstrap support for F7AER5 as seed ortholog is 100%.
Bootstrap support for F1S4I0 as seed ortholog is 100%.

Group of orthologs #788. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 S.scrofa:623

H2XYY6              	100.00%		F1S4X4              	100.00%
Bootstrap support for H2XYY6 as seed ortholog is 100%.
Bootstrap support for F1S4X4 as seed ortholog is 100%.

Group of orthologs #789. Best score 622 bits
Score difference with first non-orthologous sequence - C.intestinalis:622 S.scrofa:622

F6PNS6              	100.00%		D0G777              	100.00%
                    	       		F1SER1              	42.70%
Bootstrap support for F6PNS6 as seed ortholog is 100%.
Bootstrap support for D0G777 as seed ortholog is 100%.

Group of orthologs #790. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 S.scrofa:195

F6XLF0              	100.00%		F1S417              	100.00%
                    	       		F1S8P7              	22.90%
Bootstrap support for F6XLF0 as seed ortholog is 100%.
Bootstrap support for F1S417 as seed ortholog is 100%.

Group of orthologs #791. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:621 S.scrofa:460

H2XYJ2              	100.00%		F1SU34              	100.00%
                    	       		F1SE19              	51.82%
Bootstrap support for H2XYJ2 as seed ortholog is 100%.
Bootstrap support for F1SU34 as seed ortholog is 100%.

Group of orthologs #792. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:621 S.scrofa:539

F6X153              	100.00%		F1S0P1              	100.00%
Bootstrap support for F6X153 as seed ortholog is 100%.
Bootstrap support for F1S0P1 as seed ortholog is 100%.

Group of orthologs #793. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:621 S.scrofa:79

F7AQG9              	100.00%		F1S346              	100.00%
Bootstrap support for F7AQG9 as seed ortholog is 100%.
Bootstrap support for F1S346 as seed ortholog is 92%.

Group of orthologs #794. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:621 S.scrofa:250

H2Y169              	100.00%		F1SIK9              	100.00%
Bootstrap support for H2Y169 as seed ortholog is 100%.
Bootstrap support for F1SIK9 as seed ortholog is 100%.

Group of orthologs #795. Best score 620 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:124

F6ZAX9              	100.00%		F1STP2              	100.00%
H2XN25              	36.21%		O77564              	51.37%
Bootstrap support for F6ZAX9 as seed ortholog is 99%.
Bootstrap support for F1STP2 as seed ortholog is 98%.

Group of orthologs #796. Best score 620 bits
Score difference with first non-orthologous sequence - C.intestinalis:620 S.scrofa:620

F6SID0              	100.00%		F1S1G0              	100.00%
Bootstrap support for F6SID0 as seed ortholog is 100%.
Bootstrap support for F1S1G0 as seed ortholog is 100%.

Group of orthologs #797. Best score 620 bits
Score difference with first non-orthologous sequence - C.intestinalis:620 S.scrofa:441

F6VR09              	100.00%		F1SDN2              	100.00%
Bootstrap support for F6VR09 as seed ortholog is 100%.
Bootstrap support for F1SDN2 as seed ortholog is 100%.

Group of orthologs #798. Best score 619 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 S.scrofa:22

F6Y1K6              	100.00%		Q2EHH8              	100.00%
F6Q5E4              	40.58%		
Bootstrap support for F6Y1K6 as seed ortholog is 100%.
Bootstrap support for Q2EHH8 as seed ortholog is 84%.

Group of orthologs #799. Best score 618 bits
Score difference with first non-orthologous sequence - C.intestinalis:618 S.scrofa:233

H2Y0G9              	100.00%		F1S4P0              	100.00%
Bootstrap support for H2Y0G9 as seed ortholog is 100%.
Bootstrap support for F1S4P0 as seed ortholog is 99%.

Group of orthologs #800. Best score 617 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 S.scrofa:617

H2XZG0              	100.00%		F1RKD1              	100.00%
Bootstrap support for H2XZG0 as seed ortholog is 100%.
Bootstrap support for F1RKD1 as seed ortholog is 100%.

Group of orthologs #801. Best score 617 bits
Score difference with first non-orthologous sequence - C.intestinalis:617 S.scrofa:449

F6VVR6              	100.00%		I3LKG9              	100.00%
Bootstrap support for F6VVR6 as seed ortholog is 100%.
Bootstrap support for I3LKG9 as seed ortholog is 100%.

Group of orthologs #802. Best score 617 bits
Score difference with first non-orthologous sequence - C.intestinalis:617 S.scrofa:617

F6YQ60              	100.00%		I3LN04              	100.00%
Bootstrap support for F6YQ60 as seed ortholog is 100%.
Bootstrap support for I3LN04 as seed ortholog is 100%.

Group of orthologs #803. Best score 617 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 S.scrofa:419

F7AQ62              	100.00%		K7GP86              	100.00%
Bootstrap support for F7AQ62 as seed ortholog is 100%.
Bootstrap support for K7GP86 as seed ortholog is 100%.

Group of orthologs #804. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 S.scrofa:532

F6WAY8              	100.00%		F1S5Q4              	100.00%
                    	       		F1RYS2              	46.04%
Bootstrap support for F6WAY8 as seed ortholog is 100%.
Bootstrap support for F1S5Q4 as seed ortholog is 100%.

Group of orthologs #805. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 S.scrofa:337

F6V4B3              	100.00%		I3LSA6              	100.00%
                    	       		F1S938              	5.28%
Bootstrap support for F6V4B3 as seed ortholog is 100%.
Bootstrap support for I3LSA6 as seed ortholog is 100%.

Group of orthologs #806. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 S.scrofa:427

F6V299              	100.00%		Q863I2              	100.00%
                    	       		F1RRB4              	19.95%
Bootstrap support for F6V299 as seed ortholog is 100%.
Bootstrap support for Q863I2 as seed ortholog is 100%.

Group of orthologs #807. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 S.scrofa:433

F6SVM8              	100.00%		Q28833              	100.00%
Bootstrap support for F6SVM8 as seed ortholog is 99%.
Bootstrap support for Q28833 as seed ortholog is 100%.

Group of orthologs #808. Best score 615 bits
Score difference with first non-orthologous sequence - C.intestinalis:615 S.scrofa:615

F6YND1              	100.00%		Q7SIB7              	100.00%
                    	       		Q6RI85              	57.08%
Bootstrap support for F6YND1 as seed ortholog is 100%.
Bootstrap support for Q7SIB7 as seed ortholog is 100%.

Group of orthologs #809. Best score 615 bits
Score difference with first non-orthologous sequence - C.intestinalis:615 S.scrofa:615

H2XVM0              	100.00%		F1RY52              	100.00%
Bootstrap support for H2XVM0 as seed ortholog is 100%.
Bootstrap support for F1RY52 as seed ortholog is 100%.

Group of orthologs #810. Best score 615 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 S.scrofa:471

F6WWK0              	100.00%		I3LDL8              	100.00%
Bootstrap support for F6WWK0 as seed ortholog is 100%.
Bootstrap support for I3LDL8 as seed ortholog is 100%.

Group of orthologs #811. Best score 614 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 S.scrofa:318

F6Q2J9              	100.00%		F1RHZ9              	100.00%
Bootstrap support for F6Q2J9 as seed ortholog is 100%.
Bootstrap support for F1RHZ9 as seed ortholog is 100%.

Group of orthologs #812. Best score 614 bits
Score difference with first non-orthologous sequence - C.intestinalis:614 S.scrofa:105

F6SDU9              	100.00%		F1RIB2              	100.00%
Bootstrap support for F6SDU9 as seed ortholog is 100%.
Bootstrap support for F1RIB2 as seed ortholog is 99%.

Group of orthologs #813. Best score 614 bits
Score difference with first non-orthologous sequence - C.intestinalis:614 S.scrofa:614

F6TMY0              	100.00%		F1SJU0              	100.00%
Bootstrap support for F6TMY0 as seed ortholog is 100%.
Bootstrap support for F1SJU0 as seed ortholog is 100%.

Group of orthologs #814. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 S.scrofa:613

F7BBT3              	100.00%		F1S3R5              	100.00%
Bootstrap support for F7BBT3 as seed ortholog is 100%.
Bootstrap support for F1S3R5 as seed ortholog is 100%.

Group of orthologs #815. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:613 S.scrofa:613

F6XGL3              	100.00%		F1ST84              	100.00%
Bootstrap support for F6XGL3 as seed ortholog is 100%.
Bootstrap support for F1ST84 as seed ortholog is 100%.

Group of orthologs #816. Best score 612 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 S.scrofa:253

F6YPX6              	100.00%		F1RJ37              	100.00%
                    	       		F1S1P2              	52.14%
Bootstrap support for F6YPX6 as seed ortholog is 100%.
Bootstrap support for F1RJ37 as seed ortholog is 100%.

Group of orthologs #817. Best score 612 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.scrofa:58

F7A4H3              	100.00%		F1S715              	100.00%
F6PLF9              	5.53%		
Bootstrap support for F7A4H3 as seed ortholog is 99%.
Bootstrap support for F1S715 as seed ortholog is 90%.

Group of orthologs #818. Best score 612 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.scrofa:612

F6VL61              	100.00%		D0G0C6              	100.00%
Bootstrap support for F6VL61 as seed ortholog is 100%.
Bootstrap support for D0G0C6 as seed ortholog is 100%.

Group of orthologs #819. Best score 612 bits
Score difference with first non-orthologous sequence - C.intestinalis:612 S.scrofa:612

F6ZTJ9              	100.00%		F1RGA7              	100.00%
Bootstrap support for F6ZTJ9 as seed ortholog is 100%.
Bootstrap support for F1RGA7 as seed ortholog is 100%.

Group of orthologs #820. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:611 S.scrofa:519

F6TSN4              	100.00%		F1SF00              	100.00%
                    	       		I3LBS5              	33.88%
                    	       		F1S291              	6.86%
Bootstrap support for F6TSN4 as seed ortholog is 100%.
Bootstrap support for F1SF00 as seed ortholog is 100%.

Group of orthologs #821. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:192

F6WX88              	100.00%		F1S025              	100.00%
                    	       		F1S028              	12.59%
Bootstrap support for F6WX88 as seed ortholog is 94%.
Bootstrap support for F1S025 as seed ortholog is 100%.

Group of orthologs #822. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:611 S.scrofa:611

F6SAH8              	100.00%		F1RRB3              	100.00%
Bootstrap support for F6SAH8 as seed ortholog is 100%.
Bootstrap support for F1RRB3 as seed ortholog is 100%.

Group of orthologs #823. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 S.scrofa:611

H2XLN0              	100.00%		A5A780              	100.00%
Bootstrap support for H2XLN0 as seed ortholog is 100%.
Bootstrap support for A5A780 as seed ortholog is 100%.

Group of orthologs #824. Best score 610 bits
Score difference with first non-orthologous sequence - C.intestinalis:610 S.scrofa:610

F6TZD9              	100.00%		F1RGT8              	100.00%
Bootstrap support for F6TZD9 as seed ortholog is 100%.
Bootstrap support for F1RGT8 as seed ortholog is 100%.

Group of orthologs #825. Best score 609 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 S.scrofa:609

F6YMX2              	100.00%		I3LCV3              	100.00%
                    	       		F1RK15              	34.79%
Bootstrap support for F6YMX2 as seed ortholog is 100%.
Bootstrap support for I3LCV3 as seed ortholog is 100%.

Group of orthologs #826. Best score 609 bits
Score difference with first non-orthologous sequence - C.intestinalis:609 S.scrofa:609

F7ALJ6              	100.00%		I3LLC0              	100.00%
Bootstrap support for F7ALJ6 as seed ortholog is 100%.
Bootstrap support for I3LLC0 as seed ortholog is 100%.

Group of orthologs #827. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:608 S.scrofa:384

F6YLZ5              	100.00%		F1SD60              	100.00%
Bootstrap support for F6YLZ5 as seed ortholog is 100%.
Bootstrap support for F1SD60 as seed ortholog is 100%.

Group of orthologs #828. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:608 S.scrofa:608

F6XIQ9              	100.00%		P00506              	100.00%
Bootstrap support for F6XIQ9 as seed ortholog is 100%.
Bootstrap support for P00506 as seed ortholog is 100%.

Group of orthologs #829. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:608 S.scrofa:608

F6ZTE7              	100.00%		I3LR07              	100.00%
Bootstrap support for F6ZTE7 as seed ortholog is 100%.
Bootstrap support for I3LR07 as seed ortholog is 100%.

Group of orthologs #830. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.scrofa:321

F6VAS2              	100.00%		P67776              	100.00%
                    	       		P11493              	13.04%
Bootstrap support for F6VAS2 as seed ortholog is 100%.
Bootstrap support for P67776 as seed ortholog is 100%.

Group of orthologs #831. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 S.scrofa:241

F6REQ0              	100.00%		F1RGB1              	100.00%
Bootstrap support for F6REQ0 as seed ortholog is 100%.
Bootstrap support for F1RGB1 as seed ortholog is 100%.

Group of orthologs #832. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.scrofa:117

H2XV07              	100.00%		F1RL70              	100.00%
H2XL32              	29.90%		
F6UPM0              	26.21%		
Bootstrap support for H2XV07 as seed ortholog is 97%.
Bootstrap support for F1RL70 as seed ortholog is 99%.

Group of orthologs #833. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 S.scrofa:546

F7BML6              	100.00%		F1S087              	100.00%
                    	       		F1SF88              	39.40%
Bootstrap support for F7BML6 as seed ortholog is 100%.
Bootstrap support for F1S087 as seed ortholog is 100%.

Group of orthologs #834. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 S.scrofa:525

F6YFU4              	100.00%		F1SU25              	100.00%
F6YFZ5              	17.72%		
Bootstrap support for F6YFU4 as seed ortholog is 100%.
Bootstrap support for F1SU25 as seed ortholog is 100%.

Group of orthologs #835. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:259

F7B6X8              	100.00%		F1RQC2              	100.00%
Bootstrap support for F7B6X8 as seed ortholog is 99%.
Bootstrap support for F1RQC2 as seed ortholog is 100%.

Group of orthologs #836. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:606 S.scrofa:343

F6WPA9              	100.00%		F1SEM0              	100.00%
Bootstrap support for F6WPA9 as seed ortholog is 100%.
Bootstrap support for F1SEM0 as seed ortholog is 100%.

Group of orthologs #837. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:606 S.scrofa:434

F6ZI02              	100.00%		F1SGH9              	100.00%
Bootstrap support for F6ZI02 as seed ortholog is 100%.
Bootstrap support for F1SGH9 as seed ortholog is 100%.

Group of orthologs #838. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 S.scrofa:256

F6T636              	100.00%		F1S4R2              	100.00%
                    	       		F1SHX5              	27.26%
                    	       		F1RPY1              	19.15%
Bootstrap support for F6T636 as seed ortholog is 100%.
Bootstrap support for F1S4R2 as seed ortholog is 100%.

Group of orthologs #839. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:276

F6TVZ8              	100.00%		F2Z5G5              	100.00%
                    	       		F1STD5              	52.00%
Bootstrap support for F6TVZ8 as seed ortholog is 100%.
Bootstrap support for F2Z5G5 as seed ortholog is 100%.

Group of orthologs #840. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 S.scrofa:605

F6YHS8              	100.00%		F1RSM2              	100.00%
Bootstrap support for F6YHS8 as seed ortholog is 100%.
Bootstrap support for F1RSM2 as seed ortholog is 100%.

Group of orthologs #841. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 S.scrofa:605

F7AHM4              	100.00%		F1RXS0              	100.00%
Bootstrap support for F7AHM4 as seed ortholog is 100%.
Bootstrap support for F1RXS0 as seed ortholog is 100%.

Group of orthologs #842. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 S.scrofa:605

H2XZT6              	100.00%		F1SLR6              	100.00%
Bootstrap support for H2XZT6 as seed ortholog is 100%.
Bootstrap support for F1SLR6 as seed ortholog is 100%.

Group of orthologs #843. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 S.scrofa:117

F6UBT3              	100.00%		I3LHS1              	100.00%
                    	       		I3LBK3              	80.41%
Bootstrap support for F6UBT3 as seed ortholog is 100%.
Bootstrap support for I3LHS1 as seed ortholog is 99%.

Group of orthologs #844. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 S.scrofa:145

Q4H3S1              	100.00%		F1SCJ6              	100.00%
                    	       		F1RNX7              	50.79%
Bootstrap support for Q4H3S1 as seed ortholog is 100%.
Bootstrap support for F1SCJ6 as seed ortholog is 99%.

Group of orthologs #845. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:603 S.scrofa:603

F6UHR3              	100.00%		F1SDM8              	100.00%
Bootstrap support for F6UHR3 as seed ortholog is 100%.
Bootstrap support for F1SDM8 as seed ortholog is 100%.

Group of orthologs #846. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 S.scrofa:425

F7ABR6              	100.00%		F1RVZ1              	100.00%
Bootstrap support for F7ABR6 as seed ortholog is 100%.
Bootstrap support for F1RVZ1 as seed ortholog is 100%.

Group of orthologs #847. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 S.scrofa:472

L7N0S3              	100.00%		F1SAY9              	100.00%
Bootstrap support for L7N0S3 as seed ortholog is 100%.
Bootstrap support for F1SAY9 as seed ortholog is 100%.

Group of orthologs #848. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:602 S.scrofa:602

F6YWY7              	100.00%		B8XSK3              	100.00%
                    	       		F1SKM3              	35.10%
                    	       		F1RUL2              	19.78%
                    	       		F1RTR6              	11.98%
Bootstrap support for F6YWY7 as seed ortholog is 100%.
Bootstrap support for B8XSK3 as seed ortholog is 100%.

Group of orthologs #849. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:602 S.scrofa:354

F6ZQ65              	100.00%		F1RN30              	100.00%
                    	       		F1SKG9              	25.02%
Bootstrap support for F6ZQ65 as seed ortholog is 100%.
Bootstrap support for F1RN30 as seed ortholog is 100%.

Group of orthologs #850. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 S.scrofa:341

F6PH07              	100.00%		P36887              	100.00%
                    	       		P05383              	58.62%
Bootstrap support for F6PH07 as seed ortholog is 100%.
Bootstrap support for P36887 as seed ortholog is 100%.

Group of orthologs #851. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:602 S.scrofa:328

F6R3K6              	100.00%		F1S6V4              	100.00%
Bootstrap support for F6R3K6 as seed ortholog is 100%.
Bootstrap support for F1S6V4 as seed ortholog is 100%.

Group of orthologs #852. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:602 S.scrofa:602

F6ZA03              	100.00%		F1SH64              	100.00%
Bootstrap support for F6ZA03 as seed ortholog is 100%.
Bootstrap support for F1SH64 as seed ortholog is 100%.

Group of orthologs #853. Best score 601 bits
Score difference with first non-orthologous sequence - C.intestinalis:601 S.scrofa:601

H2XVK2              	100.00%		F1SBJ7              	100.00%
H2XQD5              	43.72%		F1SE08              	11.00%
Bootstrap support for H2XVK2 as seed ortholog is 100%.
Bootstrap support for F1SBJ7 as seed ortholog is 100%.

Group of orthologs #854. Best score 601 bits
Score difference with first non-orthologous sequence - C.intestinalis:601 S.scrofa:601

F6VMS4              	100.00%		O77741              	100.00%
                    	       		I3LMP9              	5.31%
Bootstrap support for F6VMS4 as seed ortholog is 100%.
Bootstrap support for O77741 as seed ortholog is 100%.

Group of orthologs #855. Best score 601 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 S.scrofa:109

F6RNS7              	100.00%		I3LL27              	100.00%
Bootstrap support for F6RNS7 as seed ortholog is 100%.
Bootstrap support for I3LL27 as seed ortholog is 99%.

Group of orthologs #856. Best score 600 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 S.scrofa:456

H2XNI1              	100.00%		F1RR45              	100.00%
Bootstrap support for H2XNI1 as seed ortholog is 100%.
Bootstrap support for F1RR45 as seed ortholog is 100%.

Group of orthologs #857. Best score 600 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 S.scrofa:404

F6UCG0              	100.00%		F1SQH6              	100.00%
Bootstrap support for F6UCG0 as seed ortholog is 100%.
Bootstrap support for F1SQH6 as seed ortholog is 100%.

Group of orthologs #858. Best score 599 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 S.scrofa:60

F6SZ54              	100.00%		F1S034              	100.00%
Bootstrap support for F6SZ54 as seed ortholog is 100%.
Bootstrap support for F1S034 as seed ortholog is 99%.

Group of orthologs #859. Best score 599 bits
Score difference with first non-orthologous sequence - C.intestinalis:599 S.scrofa:455

F6TZU9              	100.00%		F1SK84              	100.00%
Bootstrap support for F6TZU9 as seed ortholog is 100%.
Bootstrap support for F1SK84 as seed ortholog is 100%.

Group of orthologs #860. Best score 599 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 S.scrofa:369

F6ZXD5              	100.00%		F1SP53              	100.00%
Bootstrap support for F6ZXD5 as seed ortholog is 100%.
Bootstrap support for F1SP53 as seed ortholog is 100%.

Group of orthologs #861. Best score 597 bits
Score difference with first non-orthologous sequence - C.intestinalis:597 S.scrofa:597

F6Q2F8              	100.00%		F1RIY8              	100.00%
Bootstrap support for F6Q2F8 as seed ortholog is 100%.
Bootstrap support for F1RIY8 as seed ortholog is 100%.

Group of orthologs #862. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:596 S.scrofa:596

F6YN13              	100.00%		F1S2G7              	100.00%
                    	       		F1RMJ6              	40.86%
Bootstrap support for F6YN13 as seed ortholog is 100%.
Bootstrap support for F1S2G7 as seed ortholog is 100%.

Group of orthologs #863. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:596 S.scrofa:596

F6PZR6              	100.00%		F1RSD1              	100.00%
Bootstrap support for F6PZR6 as seed ortholog is 100%.
Bootstrap support for F1RSD1 as seed ortholog is 100%.

Group of orthologs #864. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:596 S.scrofa:596

H2XNT1              	100.00%		F1RFN1              	100.00%
Bootstrap support for H2XNT1 as seed ortholog is 100%.
Bootstrap support for F1RFN1 as seed ortholog is 100%.

Group of orthologs #865. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:596 S.scrofa:596

F6R1A2              	100.00%		I3LVA9              	100.00%
Bootstrap support for F6R1A2 as seed ortholog is 100%.
Bootstrap support for I3LVA9 as seed ortholog is 100%.

Group of orthologs #866. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:596

H2XUG5              	100.00%		F1SA44              	100.00%
Bootstrap support for H2XUG5 as seed ortholog is 100%.
Bootstrap support for F1SA44 as seed ortholog is 100%.

Group of orthologs #867. Best score 595 bits
Score difference with first non-orthologous sequence - C.intestinalis:595 S.scrofa:595

H2Y1W6              	100.00%		F1SMM0              	100.00%
Bootstrap support for H2Y1W6 as seed ortholog is 100%.
Bootstrap support for F1SMM0 as seed ortholog is 100%.

Group of orthologs #868. Best score 595 bits
Score difference with first non-orthologous sequence - C.intestinalis:595 S.scrofa:595

F6ZXH6              	100.00%		I3LU95              	100.00%
Bootstrap support for F6ZXH6 as seed ortholog is 100%.
Bootstrap support for I3LU95 as seed ortholog is 100%.

Group of orthologs #869. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:594 S.scrofa:235

H2XUW1              	100.00%		F1RTQ8              	100.00%
                    	       		F1SGL5              	11.07%
Bootstrap support for H2XUW1 as seed ortholog is 100%.
Bootstrap support for F1RTQ8 as seed ortholog is 100%.

Group of orthologs #870. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:594 S.scrofa:594

H2XQ25              	100.00%		F1SPG4              	100.00%
Bootstrap support for H2XQ25 as seed ortholog is 100%.
Bootstrap support for F1SPG4 as seed ortholog is 100%.

Group of orthologs #871. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:593 S.scrofa:522

F6Z7L9              	100.00%		F1SDP3              	100.00%
Bootstrap support for F6Z7L9 as seed ortholog is 100%.
Bootstrap support for F1SDP3 as seed ortholog is 100%.

Group of orthologs #872. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 S.scrofa:593

F7ASD2              	100.00%		F1SKJ4              	100.00%
Bootstrap support for F7ASD2 as seed ortholog is 100%.
Bootstrap support for F1SKJ4 as seed ortholog is 100%.

Group of orthologs #873. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:593 S.scrofa:593

H2XSN2              	100.00%		F1SRT2              	100.00%
Bootstrap support for H2XSN2 as seed ortholog is 100%.
Bootstrap support for F1SRT2 as seed ortholog is 100%.

Group of orthologs #874. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 S.scrofa:592

F6WBG2              	100.00%		F1SI95              	100.00%
                    	       		F1RYI1              	7.02%
Bootstrap support for F6WBG2 as seed ortholog is 99%.
Bootstrap support for F1SI95 as seed ortholog is 100%.

Group of orthologs #875. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:592 S.scrofa:592

F7BQ94              	100.00%		F1RIF3              	100.00%
Bootstrap support for F7BQ94 as seed ortholog is 100%.
Bootstrap support for F1RIF3 as seed ortholog is 100%.

Group of orthologs #876. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:592 S.scrofa:592

F6ZW39              	100.00%		I3LC92              	100.00%
Bootstrap support for F6ZW39 as seed ortholog is 100%.
Bootstrap support for I3LC92 as seed ortholog is 100%.

Group of orthologs #877. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:592 S.scrofa:197

F6Z781              	100.00%		P28491              	100.00%
Bootstrap support for F6Z781 as seed ortholog is 100%.
Bootstrap support for P28491 as seed ortholog is 100%.

Group of orthologs #878. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:111

Q8WSS1              	100.00%		Q06AS8              	100.00%
                    	       		Q06AS6              	31.40%
                    	       		F1SB90              	12.40%
Bootstrap support for Q8WSS1 as seed ortholog is 99%.
Bootstrap support for Q06AS8 as seed ortholog is 99%.

Group of orthologs #879. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:591 S.scrofa:485

F6RB18              	100.00%		F1RSX9              	100.00%
Bootstrap support for F6RB18 as seed ortholog is 100%.
Bootstrap support for F1RSX9 as seed ortholog is 100%.

Group of orthologs #880. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:591 S.scrofa:591

F6THM1              	100.00%		F1SN94              	100.00%
Bootstrap support for F6THM1 as seed ortholog is 100%.
Bootstrap support for F1SN94 as seed ortholog is 100%.

Group of orthologs #881. Best score 590 bits
Score difference with first non-orthologous sequence - C.intestinalis:590 S.scrofa:590

F6W141              	100.00%		F1RKW4              	100.00%
                    	       		Q864R5              	6.97%
Bootstrap support for F6W141 as seed ortholog is 100%.
Bootstrap support for F1RKW4 as seed ortholog is 100%.

Group of orthologs #882. Best score 590 bits
Score difference with first non-orthologous sequence - C.intestinalis:590 S.scrofa:590

H2XNA5              	100.00%		I3LUU4              	100.00%
Bootstrap support for H2XNA5 as seed ortholog is 100%.
Bootstrap support for I3LUU4 as seed ortholog is 100%.

Group of orthologs #883. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:589 S.scrofa:589

F6ZWS5              	100.00%		F1S5A2              	100.00%
Bootstrap support for F6ZWS5 as seed ortholog is 100%.
Bootstrap support for F1S5A2 as seed ortholog is 100%.

Group of orthologs #884. Best score 588 bits
Score difference with first non-orthologous sequence - C.intestinalis:588 S.scrofa:588

F6WAD4              	100.00%		F1RRS3              	100.00%
                    	       		I3LTE8              	84.89%
Bootstrap support for F6WAD4 as seed ortholog is 100%.
Bootstrap support for F1RRS3 as seed ortholog is 100%.

Group of orthologs #885. Best score 588 bits
Score difference with first non-orthologous sequence - C.intestinalis:588 S.scrofa:588

F7BD94              	100.00%		F1S2J4              	100.00%
                    	       		I3L6D0              	84.17%
Bootstrap support for F7BD94 as seed ortholog is 100%.
Bootstrap support for F1S2J4 as seed ortholog is 100%.

Group of orthologs #886. Best score 588 bits
Score difference with first non-orthologous sequence - C.intestinalis:588 S.scrofa:488

F7B221              	100.00%		F1SU28              	100.00%
                    	       		F1RQH7              	41.35%
Bootstrap support for F7B221 as seed ortholog is 100%.
Bootstrap support for F1SU28 as seed ortholog is 100%.

Group of orthologs #887. Best score 588 bits
Score difference with first non-orthologous sequence - C.intestinalis:588 S.scrofa:588

F7B5G0              	100.00%		F1SGJ0              	100.00%
Bootstrap support for F7B5G0 as seed ortholog is 100%.
Bootstrap support for F1SGJ0 as seed ortholog is 100%.

Group of orthologs #888. Best score 588 bits
Score difference with first non-orthologous sequence - C.intestinalis:588 S.scrofa:588

F6QK56              	100.00%		P53603              	100.00%
Bootstrap support for F6QK56 as seed ortholog is 100%.
Bootstrap support for P53603 as seed ortholog is 100%.

Group of orthologs #889. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 S.scrofa:194

F7AP89              	100.00%		F1S820              	100.00%
                    	       		F1SKX3              	33.21%
                    	       		Q684M5              	26.09%
Bootstrap support for F7AP89 as seed ortholog is 100%.
Bootstrap support for F1S820 as seed ortholog is 100%.

Group of orthologs #890. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 S.scrofa:423

F6Q106              	100.00%		P81140              	100.00%
                    	       		F1SEX3              	76.27%
                    	       		F1SD94              	48.31%
Bootstrap support for F6Q106 as seed ortholog is 100%.
Bootstrap support for P81140 as seed ortholog is 100%.

Group of orthologs #891. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 S.scrofa:481

F7AW67              	100.00%		I3LSK5              	100.00%
                    	       		F1SLU8              	5.17%
Bootstrap support for F7AW67 as seed ortholog is 100%.
Bootstrap support for I3LSK5 as seed ortholog is 100%.

Group of orthologs #892. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 S.scrofa:287

F6Z4W7              	100.00%		F1RIC0              	100.00%
Bootstrap support for F6Z4W7 as seed ortholog is 100%.
Bootstrap support for F1RIC0 as seed ortholog is 99%.

Group of orthologs #893. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 S.scrofa:587

F6X0V6              	100.00%		F1SDT5              	100.00%
Bootstrap support for F6X0V6 as seed ortholog is 100%.
Bootstrap support for F1SDT5 as seed ortholog is 100%.

Group of orthologs #894. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 S.scrofa:339

H2XK60              	100.00%		F1SSR4              	100.00%
Bootstrap support for H2XK60 as seed ortholog is 100%.
Bootstrap support for F1SSR4 as seed ortholog is 100%.

Group of orthologs #895. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.scrofa:586

F6W1L1              	100.00%		F1RPB7              	100.00%
Bootstrap support for F6W1L1 as seed ortholog is 100%.
Bootstrap support for F1RPB7 as seed ortholog is 100%.

Group of orthologs #896. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:586 S.scrofa:509

F6UHI7              	100.00%		F1S1E1              	100.00%
Bootstrap support for F6UHI7 as seed ortholog is 100%.
Bootstrap support for F1S1E1 as seed ortholog is 100%.

Group of orthologs #897. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 S.scrofa:411

F6WTM4              	100.00%		F1SNL9              	100.00%
Bootstrap support for F6WTM4 as seed ortholog is 100%.
Bootstrap support for F1SNL9 as seed ortholog is 100%.

Group of orthologs #898. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:586 S.scrofa:327

F7B5K2              	100.00%		F1SBK0              	100.00%
Bootstrap support for F7B5K2 as seed ortholog is 100%.
Bootstrap support for F1SBK0 as seed ortholog is 100%.

Group of orthologs #899. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 S.scrofa:586

F6UEZ5              	100.00%		P13222              	100.00%
Bootstrap support for F6UEZ5 as seed ortholog is 100%.
Bootstrap support for P13222 as seed ortholog is 100%.

Group of orthologs #900. Best score 585 bits
Score difference with first non-orthologous sequence - C.intestinalis:585 S.scrofa:585

F6USH9              	100.00%		F1SKI5              	100.00%
                    	       		F1SML7              	56.24%
Bootstrap support for F6USH9 as seed ortholog is 100%.
Bootstrap support for F1SKI5 as seed ortholog is 100%.

Group of orthologs #901. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 S.scrofa:584

F6RXC5              	100.00%		F1SEU4              	100.00%
                    	       		I3LDA3              	54.58%
                    	       		F1RSR5              	22.71%
Bootstrap support for F6RXC5 as seed ortholog is 100%.
Bootstrap support for F1SEU4 as seed ortholog is 100%.

Group of orthologs #902. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 S.scrofa:463

F6QBM2              	100.00%		F1RT28              	100.00%
Bootstrap support for F6QBM2 as seed ortholog is 100%.
Bootstrap support for F1RT28 as seed ortholog is 100%.

Group of orthologs #903. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 S.scrofa:147

F6X0I3              	100.00%		F1S0C1              	100.00%
Bootstrap support for F6X0I3 as seed ortholog is 100%.
Bootstrap support for F1S0C1 as seed ortholog is 99%.

Group of orthologs #904. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 S.scrofa:323

F7AVB6              	100.00%		F1RX66              	100.00%
Bootstrap support for F7AVB6 as seed ortholog is 100%.
Bootstrap support for F1RX66 as seed ortholog is 100%.

Group of orthologs #905. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 S.scrofa:584

F7A693              	100.00%		F1S3V2              	100.00%
Bootstrap support for F7A693 as seed ortholog is 100%.
Bootstrap support for F1S3V2 as seed ortholog is 100%.

Group of orthologs #906. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 S.scrofa:300

F6WXC5              	100.00%		F1SRA8              	100.00%
Bootstrap support for F6WXC5 as seed ortholog is 100%.
Bootstrap support for F1SRA8 as seed ortholog is 100%.

Group of orthologs #907. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 S.scrofa:584

F7A4H8              	100.00%		O97580              	100.00%
Bootstrap support for F7A4H8 as seed ortholog is 100%.
Bootstrap support for O97580 as seed ortholog is 100%.

Group of orthologs #908. Best score 583 bits
Score difference with first non-orthologous sequence - C.intestinalis:583 S.scrofa:583

F7APM6              	100.00%		F1RZP9              	100.00%
Bootstrap support for F7APM6 as seed ortholog is 100%.
Bootstrap support for F1RZP9 as seed ortholog is 100%.

Group of orthologs #909. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 S.scrofa:443

F6ZUU0              	100.00%		F1RFL5              	100.00%
Bootstrap support for F6ZUU0 as seed ortholog is 100%.
Bootstrap support for F1RFL5 as seed ortholog is 100%.

Group of orthologs #910. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.scrofa:193

F6W3N0              	100.00%		F1S5N0              	100.00%
Bootstrap support for F6W3N0 as seed ortholog is 84%.
Bootstrap support for F1S5N0 as seed ortholog is 99%.

Group of orthologs #911. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 S.scrofa:498

F6Q9C5              	100.00%		I3L616              	100.00%
Bootstrap support for F6Q9C5 as seed ortholog is 100%.
Bootstrap support for I3L616 as seed ortholog is 100%.

Group of orthologs #912. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 S.scrofa:582

F6YV51              	100.00%		F1SAK7              	100.00%
Bootstrap support for F6YV51 as seed ortholog is 100%.
Bootstrap support for F1SAK7 as seed ortholog is 100%.

Group of orthologs #913. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 S.scrofa:295

F7BQ75              	100.00%		F1SBW6              	100.00%
Bootstrap support for F7BQ75 as seed ortholog is 100%.
Bootstrap support for F1SBW6 as seed ortholog is 100%.

Group of orthologs #914. Best score 581 bits
Score difference with first non-orthologous sequence - C.intestinalis:581 S.scrofa:516

F6X3Q7              	100.00%		F1SHF4              	100.00%
Bootstrap support for F6X3Q7 as seed ortholog is 100%.
Bootstrap support for F1SHF4 as seed ortholog is 100%.

Group of orthologs #915. Best score 581 bits
Score difference with first non-orthologous sequence - C.intestinalis:494 S.scrofa:509

F6RZA6              	100.00%		I3L9C8              	100.00%
Bootstrap support for F6RZA6 as seed ortholog is 100%.
Bootstrap support for I3L9C8 as seed ortholog is 100%.

Group of orthologs #916. Best score 581 bits
Score difference with first non-orthologous sequence - C.intestinalis:581 S.scrofa:581

F6YWB6              	100.00%		F1SE91              	100.00%
Bootstrap support for F6YWB6 as seed ortholog is 100%.
Bootstrap support for F1SE91 as seed ortholog is 100%.

Group of orthologs #917. Best score 581 bits
Score difference with first non-orthologous sequence - C.intestinalis:581 S.scrofa:581

H2XLC7              	100.00%		I3LF91              	100.00%
Bootstrap support for H2XLC7 as seed ortholog is 100%.
Bootstrap support for I3LF91 as seed ortholog is 100%.

Group of orthologs #918. Best score 580 bits
Score difference with first non-orthologous sequence - C.intestinalis:580 S.scrofa:516

F7AVN5              	100.00%		F1S559              	100.00%
                    	       		I3LSQ8              	26.76%
Bootstrap support for F7AVN5 as seed ortholog is 100%.
Bootstrap support for F1S559 as seed ortholog is 100%.

Group of orthologs #919. Best score 580 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 S.scrofa:580

F6UX10              	100.00%		F1RLP1              	100.00%
Bootstrap support for F6UX10 as seed ortholog is 100%.
Bootstrap support for F1RLP1 as seed ortholog is 100%.

Group of orthologs #920. Best score 580 bits
Score difference with first non-orthologous sequence - C.intestinalis:580 S.scrofa:580

F6ZHS2              	100.00%		F1RTH3              	100.00%
Bootstrap support for F6ZHS2 as seed ortholog is 100%.
Bootstrap support for F1RTH3 as seed ortholog is 100%.

Group of orthologs #921. Best score 580 bits
Score difference with first non-orthologous sequence - C.intestinalis:580 S.scrofa:580

F7A713              	100.00%		F1S2J6              	100.00%
Bootstrap support for F7A713 as seed ortholog is 100%.
Bootstrap support for F1S2J6 as seed ortholog is 100%.

Group of orthologs #922. Best score 580 bits
Score difference with first non-orthologous sequence - C.intestinalis:580 S.scrofa:403

F7AYN4              	100.00%		F1SIT8              	100.00%
Bootstrap support for F7AYN4 as seed ortholog is 100%.
Bootstrap support for F1SIT8 as seed ortholog is 100%.

Group of orthologs #923. Best score 580 bits
Score difference with first non-orthologous sequence - C.intestinalis:580 S.scrofa:300

F6U1L2              	100.00%		P79273              	100.00%
Bootstrap support for F6U1L2 as seed ortholog is 100%.
Bootstrap support for P79273 as seed ortholog is 100%.

Group of orthologs #924. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:579

F6QBL6              	100.00%		Q9GLP0              	100.00%
                    	       		P53714              	14.57%
                    	       		Q95JH1              	10.68%
                    	       		F1SGE7              	10.14%
                    	       		Q1RPR6              	6.43%
Bootstrap support for F6QBL6 as seed ortholog is 90%.
Bootstrap support for Q9GLP0 as seed ortholog is 100%.

Group of orthologs #925. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 S.scrofa:295

F6PLA8              	100.00%		F1RKN8              	100.00%
                    	       		F1SDH5              	20.05%
Bootstrap support for F6PLA8 as seed ortholog is 100%.
Bootstrap support for F1RKN8 as seed ortholog is 100%.

Group of orthologs #926. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 S.scrofa:399

F6Z0V8              	100.00%		F2Z4Z7              	100.00%
                    	       		F1SGC8              	55.25%
Bootstrap support for F6Z0V8 as seed ortholog is 100%.
Bootstrap support for F2Z4Z7 as seed ortholog is 100%.

Group of orthologs #927. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 S.scrofa:579

F6SYF4              	100.00%		F1SUB2              	100.00%
Bootstrap support for F6SYF4 as seed ortholog is 100%.
Bootstrap support for F1SUB2 as seed ortholog is 100%.

Group of orthologs #928. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 S.scrofa:579

F6YFG4              	100.00%		F1SDN8              	100.00%
Bootstrap support for F6YFG4 as seed ortholog is 100%.
Bootstrap support for F1SDN8 as seed ortholog is 100%.

Group of orthologs #929. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 S.scrofa:579

F6RFB0              	100.00%		I3LME1              	100.00%
Bootstrap support for F6RFB0 as seed ortholog is 100%.
Bootstrap support for I3LME1 as seed ortholog is 100%.

Group of orthologs #930. Best score 578 bits
Score difference with first non-orthologous sequence - C.intestinalis:578 S.scrofa:363

Q1RL25              	100.00%		I3LA47              	100.00%
                    	       		F1RUW2              	27.05%
                    	       		I3LRM6              	25.80%
Bootstrap support for Q1RL25 as seed ortholog is 100%.
Bootstrap support for I3LA47 as seed ortholog is 100%.

Group of orthologs #931. Best score 578 bits
Score difference with first non-orthologous sequence - C.intestinalis:578 S.scrofa:412

F6YM78              	100.00%		I3LJB6              	100.00%
                    	       		F1S0U8              	47.54%
Bootstrap support for F6YM78 as seed ortholog is 100%.
Bootstrap support for I3LJB6 as seed ortholog is 100%.

Group of orthologs #932. Best score 578 bits
Score difference with first non-orthologous sequence - C.intestinalis:578 S.scrofa:578

H2XYB4              	100.00%		F1RG40              	100.00%
Bootstrap support for H2XYB4 as seed ortholog is 100%.
Bootstrap support for F1RG40 as seed ortholog is 100%.

Group of orthologs #933. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:577 S.scrofa:577

H2XT92              	100.00%		I3LCC3              	100.00%
                    	       		F1S2J2              	30.22%
                    	       		F1RV77              	15.40%
Bootstrap support for H2XT92 as seed ortholog is 100%.
Bootstrap support for I3LCC3 as seed ortholog is 100%.

Group of orthologs #934. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:577 S.scrofa:250

F6PGW6              	100.00%		F1RID1              	100.00%
Bootstrap support for F6PGW6 as seed ortholog is 100%.
Bootstrap support for F1RID1 as seed ortholog is 100%.

Group of orthologs #935. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:577 S.scrofa:498

F6XLX0              	100.00%		F1RRA8              	100.00%
Bootstrap support for F6XLX0 as seed ortholog is 100%.
Bootstrap support for F1RRA8 as seed ortholog is 100%.

Group of orthologs #936. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:577 S.scrofa:204

F7BB43              	100.00%		F1RQH9              	100.00%
Bootstrap support for F7BB43 as seed ortholog is 100%.
Bootstrap support for F1RQH9 as seed ortholog is 99%.

Group of orthologs #937. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:577 S.scrofa:577

F6TIM2              	100.00%		F2Z5N4              	100.00%
Bootstrap support for F6TIM2 as seed ortholog is 100%.
Bootstrap support for F2Z5N4 as seed ortholog is 100%.

Group of orthologs #938. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:577 S.scrofa:577

F6U609              	100.00%		I3LDD2              	100.00%
Bootstrap support for F6U609 as seed ortholog is 100%.
Bootstrap support for I3LDD2 as seed ortholog is 100%.

Group of orthologs #939. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.scrofa:177

F6X9M4              	100.00%		F1S617              	100.00%
                    	       		I3LUD9              	59.55%
                    	       		F1RYN4              	16.98%
Bootstrap support for F6X9M4 as seed ortholog is 99%.
Bootstrap support for F1S617 as seed ortholog is 100%.

Group of orthologs #940. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 S.scrofa:576

H2XPJ9              	100.00%		F1S940              	100.00%
                    	       		I3LP13              	39.83%
                    	       		F1RR83              	7.22%
Bootstrap support for H2XPJ9 as seed ortholog is 100%.
Bootstrap support for F1S940 as seed ortholog is 100%.

Group of orthologs #941. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 S.scrofa:374

F7BHM4              	100.00%		F1SUG7              	100.00%
                    	       		F1SUG8              	19.53%
Bootstrap support for F7BHM4 as seed ortholog is 100%.
Bootstrap support for F1SUG7 as seed ortholog is 100%.

Group of orthologs #942. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 S.scrofa:576

F6UUQ0              	100.00%		F1RZI9              	100.00%
Bootstrap support for F6UUQ0 as seed ortholog is 100%.
Bootstrap support for F1RZI9 as seed ortholog is 100%.

Group of orthologs #943. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 S.scrofa:305

F6WWC7              	100.00%		F1RZM6              	100.00%
Bootstrap support for F6WWC7 as seed ortholog is 100%.
Bootstrap support for F1RZM6 as seed ortholog is 100%.

Group of orthologs #944. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 S.scrofa:576

F6VGC6              	100.00%		I3LPP4              	100.00%
Bootstrap support for F6VGC6 as seed ortholog is 100%.
Bootstrap support for I3LPP4 as seed ortholog is 100%.

Group of orthologs #945. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 S.scrofa:576

H2XPV7              	100.00%		I3LE25              	100.00%
Bootstrap support for H2XPV7 as seed ortholog is 100%.
Bootstrap support for I3LE25 as seed ortholog is 100%.

Group of orthologs #946. Best score 575 bits
Score difference with first non-orthologous sequence - C.intestinalis:575 S.scrofa:437

F6SDM6              	100.00%		F1RJG0              	100.00%
                    	       		F1SFT6              	9.40%
Bootstrap support for F6SDM6 as seed ortholog is 100%.
Bootstrap support for F1RJG0 as seed ortholog is 100%.

Group of orthologs #947. Best score 575 bits
Score difference with first non-orthologous sequence - C.intestinalis:575 S.scrofa:575

F6ZA35              	100.00%		P50441              	100.00%
Bootstrap support for F6ZA35 as seed ortholog is 100%.
Bootstrap support for P50441 as seed ortholog is 100%.

Group of orthologs #948. Best score 575 bits
Score difference with first non-orthologous sequence - C.intestinalis:575 S.scrofa:375

F7ADR7              	100.00%		P79274              	100.00%
Bootstrap support for F7ADR7 as seed ortholog is 100%.
Bootstrap support for P79274 as seed ortholog is 100%.

Group of orthologs #949. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:574 S.scrofa:574

F6YIL9              	100.00%		I3L893              	100.00%
                    	       		Q6Q7J2              	67.77%
Bootstrap support for F6YIL9 as seed ortholog is 100%.
Bootstrap support for I3L893 as seed ortholog is 100%.

Group of orthologs #950. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:574 S.scrofa:574

Q1RL44              	100.00%		F1RVY8              	100.00%
                    	       		I3LAS6              	18.71%
Bootstrap support for Q1RL44 as seed ortholog is 100%.
Bootstrap support for F1RVY8 as seed ortholog is 100%.

Group of orthologs #951. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 S.scrofa:164

H2XQ28              	100.00%		F1RJC1              	100.00%
Bootstrap support for H2XQ28 as seed ortholog is 99%.
Bootstrap support for F1RJC1 as seed ortholog is 99%.

Group of orthologs #952. Best score 573 bits
Score difference with first non-orthologous sequence - C.intestinalis:573 S.scrofa:573

F6QZI8              	100.00%		F1SNT3              	100.00%
                    	       		Q5MNU5              	99.12%
Bootstrap support for F6QZI8 as seed ortholog is 100%.
Bootstrap support for F1SNT3 as seed ortholog is 100%.

Group of orthologs #953. Best score 573 bits
Score difference with first non-orthologous sequence - C.intestinalis:573 S.scrofa:343

F6W8D0              	100.00%		F1SBB0              	100.00%
Bootstrap support for F6W8D0 as seed ortholog is 100%.
Bootstrap support for F1SBB0 as seed ortholog is 100%.

Group of orthologs #954. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:572 S.scrofa:524

F6YBW7              	100.00%		A5GFN6              	100.00%
Bootstrap support for F6YBW7 as seed ortholog is 100%.
Bootstrap support for A5GFN6 as seed ortholog is 100%.

Group of orthologs #955. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:572 S.scrofa:572

H2XZ65              	100.00%		F1RTV1              	100.00%
Bootstrap support for H2XZ65 as seed ortholog is 100%.
Bootstrap support for F1RTV1 as seed ortholog is 100%.

Group of orthologs #956. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 S.scrofa:572

F6VYZ5              	100.00%		I3LB78              	100.00%
Bootstrap support for F6VYZ5 as seed ortholog is 100%.
Bootstrap support for I3LB78 as seed ortholog is 100%.

Group of orthologs #957. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 S.scrofa:572

F7BH30              	100.00%		Q5XLD3              	100.00%
Bootstrap support for F7BH30 as seed ortholog is 100%.
Bootstrap support for Q5XLD3 as seed ortholog is 100%.

Group of orthologs #958. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 S.scrofa:571

Q5QQ55              	100.00%		F1RLT2              	100.00%
                    	       		F1RT78              	26.30%
Bootstrap support for Q5QQ55 as seed ortholog is 100%.
Bootstrap support for F1RLT2 as seed ortholog is 100%.

Group of orthologs #959. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 S.scrofa:75

F6SSQ7              	100.00%		F1RY31              	100.00%
Bootstrap support for F6SSQ7 as seed ortholog is 100%.
Bootstrap support for F1RY31 as seed ortholog is 88%.

Group of orthologs #960. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 S.scrofa:37

F6S4V6              	100.00%		F1SQE5              	100.00%
Bootstrap support for F6S4V6 as seed ortholog is 100%.
Bootstrap support for F1SQE5 as seed ortholog is 68%.
Alternative seed ortholog is F1RXQ1 (37 bits away from this cluster)

Group of orthologs #961. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 S.scrofa:472

F7A1R5              	100.00%		F1SP81              	100.00%
Bootstrap support for F7A1R5 as seed ortholog is 100%.
Bootstrap support for F1SP81 as seed ortholog is 100%.

Group of orthologs #962. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 S.scrofa:571

H2XJF4              	100.00%		F1SL74              	100.00%
Bootstrap support for H2XJF4 as seed ortholog is 100%.
Bootstrap support for F1SL74 as seed ortholog is 100%.

Group of orthologs #963. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 S.scrofa:571

F7BMR9              	100.00%		I3L9M2              	100.00%
Bootstrap support for F7BMR9 as seed ortholog is 100%.
Bootstrap support for I3L9M2 as seed ortholog is 100%.

Group of orthologs #964. Best score 570 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.scrofa:154

F6Y1R8              	100.00%		Q8SPR7              	100.00%
                    	       		F1SRY6              	21.03%
                    	       		F1RR07              	14.49%
                    	       		I3L7K2              	11.87%
Bootstrap support for F6Y1R8 as seed ortholog is 98%.
Bootstrap support for Q8SPR7 as seed ortholog is 99%.

Group of orthologs #965. Best score 570 bits
Score difference with first non-orthologous sequence - C.intestinalis:570 S.scrofa:310

F6PH72              	100.00%		F1RMJ4              	100.00%
                    	       		F1RP39              	45.05%
                    	       		F1S2H7              	9.53%
Bootstrap support for F6PH72 as seed ortholog is 100%.
Bootstrap support for F1RMJ4 as seed ortholog is 100%.

Group of orthologs #966. Best score 570 bits
Score difference with first non-orthologous sequence - C.intestinalis:570 S.scrofa:570

H2XLJ5              	100.00%		F1S4S5              	100.00%
                    	       		F1S8C1              	35.04%
Bootstrap support for H2XLJ5 as seed ortholog is 100%.
Bootstrap support for F1S4S5 as seed ortholog is 100%.

Group of orthologs #967. Best score 570 bits
Score difference with first non-orthologous sequence - C.intestinalis:570 S.scrofa:570

H2XKN0              	100.00%		F1S500              	100.00%
Bootstrap support for H2XKN0 as seed ortholog is 100%.
Bootstrap support for F1S500 as seed ortholog is 100%.

Group of orthologs #968. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 S.scrofa:391

H2XPW5              	100.00%		I3L7K3              	100.00%
                    	       		I3LCR3              	45.83%
                    	       		I3L7Q5              	38.47%
Bootstrap support for H2XPW5 as seed ortholog is 100%.
Bootstrap support for I3L7K3 as seed ortholog is 100%.

Group of orthologs #969. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 S.scrofa:227

H2Y307              	100.00%		I3L715              	100.00%
Bootstrap support for H2Y307 as seed ortholog is 100%.
Bootstrap support for I3L715 as seed ortholog is 100%.

Group of orthologs #970. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 S.scrofa:75

F7A9Y8              	100.00%		F1RLJ5              	100.00%
                    	       		F1SIE6              	6.54%
Bootstrap support for F7A9Y8 as seed ortholog is 100%.
Bootstrap support for F1RLJ5 as seed ortholog is 89%.

Group of orthologs #971. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 S.scrofa:567

F7AN36              	100.00%		F1SSM9              	100.00%
                    	       		I3LGX9              	28.02%
Bootstrap support for F7AN36 as seed ortholog is 100%.
Bootstrap support for F1SSM9 as seed ortholog is 100%.

Group of orthologs #972. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:567 S.scrofa:469

H2XS58              	100.00%		F1SFS1              	100.00%
                    	       		F1SBQ7              	11.66%
Bootstrap support for H2XS58 as seed ortholog is 100%.
Bootstrap support for F1SFS1 as seed ortholog is 100%.

Group of orthologs #973. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 S.scrofa:567

F6UIG7              	100.00%		F1S590              	100.00%
Bootstrap support for F6UIG7 as seed ortholog is 100%.
Bootstrap support for F1S590 as seed ortholog is 100%.

Group of orthologs #974. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:567 S.scrofa:567

F6PHE6              	100.00%		F2Z4X9              	100.00%
Bootstrap support for F6PHE6 as seed ortholog is 100%.
Bootstrap support for F2Z4X9 as seed ortholog is 100%.

Group of orthologs #975. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:567 S.scrofa:567

F6YJE0              	100.00%		F1S3R7              	100.00%
Bootstrap support for F6YJE0 as seed ortholog is 100%.
Bootstrap support for F1S3R7 as seed ortholog is 100%.

Group of orthologs #976. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:567 S.scrofa:567

F6WJQ9              	100.00%		F1SB54              	100.00%
Bootstrap support for F6WJQ9 as seed ortholog is 100%.
Bootstrap support for F1SB54 as seed ortholog is 100%.

Group of orthologs #977. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:567 S.scrofa:148

F7AD70              	100.00%		F1SBP9              	100.00%
Bootstrap support for F7AD70 as seed ortholog is 100%.
Bootstrap support for F1SBP9 as seed ortholog is 99%.

Group of orthologs #978. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:567 S.scrofa:567

F6Y4G4              	100.00%		F1SKL8              	100.00%
Bootstrap support for F6Y4G4 as seed ortholog is 100%.
Bootstrap support for F1SKL8 as seed ortholog is 100%.

Group of orthologs #979. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.scrofa:272

F6YJQ7              	100.00%		F1S232              	100.00%
Bootstrap support for F6YJQ7 as seed ortholog is 100%.
Bootstrap support for F1S232 as seed ortholog is 100%.

Group of orthologs #980. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:566 S.scrofa:566

F7BDH1              	100.00%		F1RRD6              	100.00%
Bootstrap support for F7BDH1 as seed ortholog is 100%.
Bootstrap support for F1RRD6 as seed ortholog is 100%.

Group of orthologs #981. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 S.scrofa:116

F6Y4T9              	100.00%		F1SD00              	100.00%
Bootstrap support for F6Y4T9 as seed ortholog is 59%.
Alternative seed ortholog is F6YGW9 (12 bits away from this cluster)
Bootstrap support for F1SD00 as seed ortholog is 99%.

Group of orthologs #982. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:566 S.scrofa:190

F6U7Z2              	100.00%		I3LS61              	100.00%
Bootstrap support for F6U7Z2 as seed ortholog is 100%.
Bootstrap support for I3LS61 as seed ortholog is 99%.

Group of orthologs #983. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.scrofa:311

H2XK85              	100.00%		F2Z5N6              	100.00%
Bootstrap support for H2XK85 as seed ortholog is 100%.
Bootstrap support for F2Z5N6 as seed ortholog is 100%.

Group of orthologs #984. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:343

F6TB77              	100.00%		F1RVQ6              	100.00%
Bootstrap support for F6TB77 as seed ortholog is 100%.
Bootstrap support for F1RVQ6 as seed ortholog is 100%.

Group of orthologs #985. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 S.scrofa:272

F6ZMT5              	100.00%		F1RW16              	100.00%
                    	       		F1SEL1              	58.99%
                    	       		F1S5Q3              	40.74%
Bootstrap support for F6ZMT5 as seed ortholog is 100%.
Bootstrap support for F1RW16 as seed ortholog is 100%.

Group of orthologs #986. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:564 S.scrofa:564

F7BK08              	100.00%		I3LIQ5              	100.00%
Bootstrap support for F7BK08 as seed ortholog is 100%.
Bootstrap support for I3LIQ5 as seed ortholog is 100%.

Group of orthologs #987. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.scrofa:294

F6YS67              	100.00%		Q6GWX0              	100.00%
Bootstrap support for F6YS67 as seed ortholog is 100%.
Bootstrap support for Q6GWX0 as seed ortholog is 100%.

Group of orthologs #988. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:562 S.scrofa:562

F6SQE9              	100.00%		F1RS21              	100.00%
Bootstrap support for F6SQE9 as seed ortholog is 100%.
Bootstrap support for F1RS21 as seed ortholog is 100%.

Group of orthologs #989. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:562 S.scrofa:225

Q1RPX1              	100.00%		F1RTB9              	100.00%
Bootstrap support for Q1RPX1 as seed ortholog is 100%.
Bootstrap support for F1RTB9 as seed ortholog is 100%.

Group of orthologs #990. Best score 561 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 S.scrofa:192

F6YJ55              	100.00%		A8HG48              	100.00%
F6YJ69              	35.97%		
Bootstrap support for F6YJ55 as seed ortholog is 99%.
Bootstrap support for A8HG48 as seed ortholog is 100%.

Group of orthologs #991. Best score 560 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 S.scrofa:304

F6R4H2              	100.00%		C9E1C9              	100.00%
Bootstrap support for F6R4H2 as seed ortholog is 100%.
Bootstrap support for C9E1C9 as seed ortholog is 100%.

Group of orthologs #992. Best score 560 bits
Score difference with first non-orthologous sequence - C.intestinalis:560 S.scrofa:560

F7A9V2              	100.00%		F1RTZ1              	100.00%
Bootstrap support for F7A9V2 as seed ortholog is 100%.
Bootstrap support for F1RTZ1 as seed ortholog is 100%.

Group of orthologs #993. Best score 560 bits
Score difference with first non-orthologous sequence - C.intestinalis:560 S.scrofa:560

F6YDK0              	100.00%		F1SKQ5              	100.00%
Bootstrap support for F6YDK0 as seed ortholog is 100%.
Bootstrap support for F1SKQ5 as seed ortholog is 100%.

Group of orthologs #994. Best score 560 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 S.scrofa:295

F7AAZ2              	100.00%		F1SU09              	100.00%
Bootstrap support for F7AAZ2 as seed ortholog is 100%.
Bootstrap support for F1SU09 as seed ortholog is 100%.

Group of orthologs #995. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 S.scrofa:69

F6YLJ0              	100.00%		F1SFZ7              	100.00%
F6VIM5              	6.61%		F1SRH7              	13.18%
Bootstrap support for F6YLJ0 as seed ortholog is 88%.
Bootstrap support for F1SFZ7 as seed ortholog is 94%.

Group of orthologs #996. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:559 S.scrofa:217

F6SDE2              	100.00%		I3LSM3              	100.00%
                    	       		F1RLP9              	22.22%
Bootstrap support for F6SDE2 as seed ortholog is 100%.
Bootstrap support for I3LSM3 as seed ortholog is 99%.

Group of orthologs #997. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:559 S.scrofa:223

F6UG35              	100.00%		F1S0F1              	100.00%
Bootstrap support for F6UG35 as seed ortholog is 100%.
Bootstrap support for F1S0F1 as seed ortholog is 100%.

Group of orthologs #998. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:559 S.scrofa:559

F7B0I1              	100.00%		F1RKW8              	100.00%
Bootstrap support for F7B0I1 as seed ortholog is 100%.
Bootstrap support for F1RKW8 as seed ortholog is 100%.

Group of orthologs #999. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.scrofa:126

F6WQS9              	100.00%		F1RGM6              	100.00%
                    	       		F1RKU7              	16.95%
Bootstrap support for F6WQS9 as seed ortholog is 99%.
Bootstrap support for F1RGM6 as seed ortholog is 99%.

Group of orthologs #1000. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 S.scrofa:485

F6W122              	100.00%		F1SAG0              	100.00%
                    	       		F1SD44              	48.25%
Bootstrap support for F6W122 as seed ortholog is 100%.
Bootstrap support for F1SAG0 as seed ortholog is 100%.

Group of orthologs #1001. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 S.scrofa:350

F7BP11              	100.00%		F1SKI2              	100.00%
Bootstrap support for F7BP11 as seed ortholog is 100%.
Bootstrap support for F1SKI2 as seed ortholog is 100%.

Group of orthologs #1002. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 S.scrofa:558

F7BBV8              	100.00%		I3LIP2              	100.00%
Bootstrap support for F7BBV8 as seed ortholog is 100%.
Bootstrap support for I3LIP2 as seed ortholog is 100%.

Group of orthologs #1003. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:557 S.scrofa:557

F6XHG6              	100.00%		F1S3P5              	100.00%
                    	       		I3LS30              	18.95%
                    	       		F1S280              	16.75%
Bootstrap support for F6XHG6 as seed ortholog is 100%.
Bootstrap support for F1S3P5 as seed ortholog is 100%.

Group of orthologs #1004. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 S.scrofa:300

F6WBI7              	100.00%		F1RUE3              	100.00%
F6WXA3              	43.31%		
Bootstrap support for F6WBI7 as seed ortholog is 100%.
Bootstrap support for F1RUE3 as seed ortholog is 100%.

Group of orthologs #1005. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:494 S.scrofa:557

F6R5L0              	100.00%		F2Z572              	100.00%
                    	       		F1SG10              	69.44%
Bootstrap support for F6R5L0 as seed ortholog is 100%.
Bootstrap support for F2Z572 as seed ortholog is 100%.

Group of orthologs #1006. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:557 S.scrofa:246

F6PKW3              	100.00%		F1RMJ0              	100.00%
Bootstrap support for F6PKW3 as seed ortholog is 100%.
Bootstrap support for F1RMJ0 as seed ortholog is 100%.

Group of orthologs #1007. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:557 S.scrofa:557

F6U1V3              	100.00%		I3LH61              	100.00%
Bootstrap support for F6U1V3 as seed ortholog is 100%.
Bootstrap support for I3LH61 as seed ortholog is 100%.

Group of orthologs #1008. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.scrofa:162

F6W6V6              	100.00%		I3LC15              	100.00%
Bootstrap support for F6W6V6 as seed ortholog is 99%.
Bootstrap support for I3LC15 as seed ortholog is 99%.

Group of orthologs #1009. Best score 556 bits
Score difference with first non-orthologous sequence - C.intestinalis:556 S.scrofa:172

F6W4K8              	100.00%		F1RYR0              	100.00%
                    	       		F1SV43              	74.31%
                    	       		I3LT35              	70.64%
                    	       		F1S9S0              	7.17%
Bootstrap support for F6W4K8 as seed ortholog is 100%.
Bootstrap support for F1RYR0 as seed ortholog is 99%.

Group of orthologs #1010. Best score 556 bits
Score difference with first non-orthologous sequence - C.intestinalis:556 S.scrofa:556

F6TAK8              	100.00%		I3LUY0              	100.00%
                    	       		I3LV77              	19.64%
Bootstrap support for F6TAK8 as seed ortholog is 100%.
Bootstrap support for I3LUY0 as seed ortholog is 100%.

Group of orthologs #1011. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 S.scrofa:67

F6XTY4              	100.00%		F1S432              	100.00%
                    	       		I3LC00              	89.42%
                    	       		F1RVF0              	17.63%
Bootstrap support for F6XTY4 as seed ortholog is 100%.
Bootstrap support for F1S432 as seed ortholog is 97%.

Group of orthologs #1012. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 S.scrofa:320

F6W1F7              	100.00%		F1S0N6              	100.00%
Bootstrap support for F6W1F7 as seed ortholog is 100%.
Bootstrap support for F1S0N6 as seed ortholog is 100%.

Group of orthologs #1013. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 S.scrofa:555

F6Z6K5              	100.00%		F1S856              	100.00%
Bootstrap support for F6Z6K5 as seed ortholog is 100%.
Bootstrap support for F1S856 as seed ortholog is 100%.

Group of orthologs #1014. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 S.scrofa:555

H2XNB1              	100.00%		F1RVP4              	100.00%
Bootstrap support for H2XNB1 as seed ortholog is 100%.
Bootstrap support for F1RVP4 as seed ortholog is 100%.

Group of orthologs #1015. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 S.scrofa:555

F6QR08              	100.00%		Q9TVC1              	100.00%
Bootstrap support for F6QR08 as seed ortholog is 100%.
Bootstrap support for Q9TVC1 as seed ortholog is 100%.

Group of orthologs #1016. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:554 S.scrofa:554

F6UDR5              	100.00%		I3LGS3              	100.00%
                    	       		I3LI07              	35.08%
                    	       		I3L9A8              	31.33%
                    	       		I3LTJ1              	6.04%
Bootstrap support for F6UDR5 as seed ortholog is 100%.
Bootstrap support for I3LGS3 as seed ortholog is 100%.

Group of orthologs #1017. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:489 S.scrofa:282

H2Y2K5              	100.00%		F1SR01              	100.00%
F6VXL3              	6.13%		
Bootstrap support for H2Y2K5 as seed ortholog is 100%.
Bootstrap support for F1SR01 as seed ortholog is 100%.

Group of orthologs #1018. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 S.scrofa:391

F7B040              	100.00%		F1RWZ2              	100.00%
Bootstrap support for F7B040 as seed ortholog is 100%.
Bootstrap support for F1RWZ2 as seed ortholog is 100%.

Group of orthologs #1019. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 S.scrofa:139

F7A6E1              	100.00%		F1RNK6              	100.00%
                    	       		F1RNK4              	69.61%
                    	       		I3LN75              	46.89%
                    	       		F1RNK7              	43.56%
                    	       		A8I499              	9.26%
Bootstrap support for F7A6E1 as seed ortholog is 72%.
Alternative seed ortholog is F7AQC2 (33 bits away from this cluster)
Bootstrap support for F1RNK6 as seed ortholog is 99%.

Group of orthologs #1020. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 S.scrofa:159

F6ZP71              	100.00%		C8C417              	100.00%
                    	       		F6Q4L6              	7.57%
Bootstrap support for F6ZP71 as seed ortholog is 100%.
Bootstrap support for C8C417 as seed ortholog is 99%.

Group of orthologs #1021. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.scrofa:115

F6YPB8              	100.00%		F1SDB7              	100.00%
                    	       		F1S246              	12.73%
Bootstrap support for F6YPB8 as seed ortholog is 99%.
Bootstrap support for F1SDB7 as seed ortholog is 99%.

Group of orthologs #1022. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:553 S.scrofa:553

F6QEV0              	100.00%		I3LB55              	100.00%
Bootstrap support for F6QEV0 as seed ortholog is 100%.
Bootstrap support for I3LB55 as seed ortholog is 100%.

Group of orthologs #1023. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 S.scrofa:147

Q4H3L5              	100.00%		F1RL02              	100.00%
Bootstrap support for Q4H3L5 as seed ortholog is 100%.
Bootstrap support for F1RL02 as seed ortholog is 100%.

Group of orthologs #1024. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 S.scrofa:553

F7AFK4              	100.00%		F1SSU5              	100.00%
Bootstrap support for F7AFK4 as seed ortholog is 100%.
Bootstrap support for F1SSU5 as seed ortholog is 100%.

Group of orthologs #1025. Best score 552 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 S.scrofa:72

F6VSX4              	100.00%		I3LCS3              	100.00%
F6V5T4              	31.48%		
Bootstrap support for F6VSX4 as seed ortholog is 61%.
Alternative seed ortholog is F6W833 (9 bits away from this cluster)
Bootstrap support for I3LCS3 as seed ortholog is 95%.

Group of orthologs #1026. Best score 552 bits
Score difference with first non-orthologous sequence - C.intestinalis:552 S.scrofa:552

F6VVE9              	100.00%		I3L6T4              	100.00%
Bootstrap support for F6VVE9 as seed ortholog is 100%.
Bootstrap support for I3L6T4 as seed ortholog is 100%.

Group of orthologs #1027. Best score 552 bits
Score difference with first non-orthologous sequence - C.intestinalis:552 S.scrofa:552

H2XZ93              	100.00%		F1RTZ5              	100.00%
Bootstrap support for H2XZ93 as seed ortholog is 100%.
Bootstrap support for F1RTZ5 as seed ortholog is 100%.

Group of orthologs #1028. Best score 551 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.scrofa:197

F6SML2              	100.00%		Q2PKF4              	100.00%
                    	       		Q2XSV9              	62.13%
                    	       		A4L2Z4              	28.40%
Bootstrap support for F6SML2 as seed ortholog is 100%.
Bootstrap support for Q2PKF4 as seed ortholog is 100%.

Group of orthologs #1029. Best score 551 bits
Score difference with first non-orthologous sequence - C.intestinalis:551 S.scrofa:551

H2XW46              	100.00%		F1S2I3              	100.00%
H2XPW9              	9.44%		
Bootstrap support for H2XW46 as seed ortholog is 100%.
Bootstrap support for F1S2I3 as seed ortholog is 100%.

Group of orthologs #1030. Best score 551 bits
Score difference with first non-orthologous sequence - C.intestinalis:551 S.scrofa:551

H2XVW1              	100.00%		I3LM52              	100.00%
                    	       		F1S1J4              	16.82%
Bootstrap support for H2XVW1 as seed ortholog is 100%.
Bootstrap support for I3LM52 as seed ortholog is 100%.

Group of orthologs #1031. Best score 551 bits
Score difference with first non-orthologous sequence - C.intestinalis:551 S.scrofa:551

F6VQX3              	100.00%		F1SSM0              	100.00%
Bootstrap support for F6VQX3 as seed ortholog is 100%.
Bootstrap support for F1SSM0 as seed ortholog is 100%.

Group of orthologs #1032. Best score 551 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.scrofa:250

F7A2K6              	100.00%		P20735              	100.00%
Bootstrap support for F7A2K6 as seed ortholog is 100%.
Bootstrap support for P20735 as seed ortholog is 100%.

Group of orthologs #1033. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 S.scrofa:550

F7B0A7              	100.00%		F1SI77              	100.00%
                    	       		Q29577              	100.00%
                    	       		Q2HYU1              	48.49%
Bootstrap support for F7B0A7 as seed ortholog is 100%.
Bootstrap support for F1SI77 as seed ortholog is 100%.
Bootstrap support for Q29577 as seed ortholog is 100%.

Group of orthologs #1034. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:550 S.scrofa:550

F6UNT7              	100.00%		F1RXT3              	100.00%
                    	       		F1RMN3              	8.95%
Bootstrap support for F6UNT7 as seed ortholog is 100%.
Bootstrap support for F1RXT3 as seed ortholog is 100%.

Group of orthologs #1035. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:550 S.scrofa:319

H2XVF8              	100.00%		I3LF79              	100.00%
                    	       		I3LSG7              	39.97%
Bootstrap support for H2XVF8 as seed ortholog is 100%.
Bootstrap support for I3LF79 as seed ortholog is 100%.

Group of orthologs #1036. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 S.scrofa:361

F6SDQ3              	100.00%		F1S7D9              	100.00%
Bootstrap support for F6SDQ3 as seed ortholog is 100%.
Bootstrap support for F1S7D9 as seed ortholog is 100%.

Group of orthologs #1037. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 S.scrofa:424

F6U222              	100.00%		F1S764              	100.00%
Bootstrap support for F6U222 as seed ortholog is 100%.
Bootstrap support for F1S764 as seed ortholog is 100%.

Group of orthologs #1038. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:550 S.scrofa:550

F6WRF3              	100.00%		I3LDB7              	100.00%
Bootstrap support for F6WRF3 as seed ortholog is 100%.
Bootstrap support for I3LDB7 as seed ortholog is 100%.

Group of orthologs #1039. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 S.scrofa:374

F6UD02              	100.00%		F1SG17              	100.00%
                    	       		F1RXJ0              	65.81%
Bootstrap support for F6UD02 as seed ortholog is 100%.
Bootstrap support for F1SG17 as seed ortholog is 100%.

Group of orthologs #1040. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 S.scrofa:549

F6TMN3              	100.00%		A7Y521              	100.00%
Bootstrap support for F6TMN3 as seed ortholog is 100%.
Bootstrap support for A7Y521 as seed ortholog is 100%.

Group of orthologs #1041. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 S.scrofa:549

F6TCF1              	100.00%		F1RQL8              	100.00%
Bootstrap support for F6TCF1 as seed ortholog is 100%.
Bootstrap support for F1RQL8 as seed ortholog is 100%.

Group of orthologs #1042. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 S.scrofa:549

F6ZJF3              	100.00%		F1S8B5              	100.00%
Bootstrap support for F6ZJF3 as seed ortholog is 100%.
Bootstrap support for F1S8B5 as seed ortholog is 100%.

Group of orthologs #1043. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 S.scrofa:349

F7AA42              	100.00%		I3L976              	100.00%
Bootstrap support for F7AA42 as seed ortholog is 100%.
Bootstrap support for I3L976 as seed ortholog is 100%.

Group of orthologs #1044. Best score 548 bits
Score difference with first non-orthologous sequence - C.intestinalis:548 S.scrofa:548

F6U1K7              	100.00%		F1SI92              	100.00%
Bootstrap support for F6U1K7 as seed ortholog is 100%.
Bootstrap support for F1SI92 as seed ortholog is 100%.

Group of orthologs #1045. Best score 548 bits
Score difference with first non-orthologous sequence - C.intestinalis:548 S.scrofa:548

F6QLM7              	100.00%		F2Z540              	100.00%
Bootstrap support for F6QLM7 as seed ortholog is 100%.
Bootstrap support for F2Z540 as seed ortholog is 100%.

Group of orthologs #1046. Best score 548 bits
Score difference with first non-orthologous sequence - C.intestinalis:548 S.scrofa:548

F6X3S3              	100.00%		F2Z5N9              	100.00%
Bootstrap support for F6X3S3 as seed ortholog is 100%.
Bootstrap support for F2Z5N9 as seed ortholog is 100%.

Group of orthologs #1047. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:547 S.scrofa:547

F6ZTX2              	100.00%		F1S574              	100.00%
                    	       		P00690              	99.08%
                    	       		I3L5F2              	97.24%
                    	       		I3LHC3              	43.20%
                    	       		I3LLP2              	41.54%
                    	       		F1S573              	38.79%
Bootstrap support for F6ZTX2 as seed ortholog is 100%.
Bootstrap support for F1S574 as seed ortholog is 100%.

Group of orthologs #1048. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:547 S.scrofa:547

F6SM47              	100.00%		F1SU12              	100.00%
                    	       		Q29381              	98.19%
Bootstrap support for F6SM47 as seed ortholog is 100%.
Bootstrap support for F1SU12 as seed ortholog is 100%.

Group of orthologs #1049. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:119

F6YP78              	100.00%		I3L6F7              	100.00%
F6WN12              	47.16%		
Bootstrap support for F6YP78 as seed ortholog is 94%.
Bootstrap support for I3L6F7 as seed ortholog is 99%.

Group of orthologs #1050. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 S.scrofa:66

H2XT39              	100.00%		F1SDE8              	100.00%
Bootstrap support for H2XT39 as seed ortholog is 100%.
Bootstrap support for F1SDE8 as seed ortholog is 95%.

Group of orthologs #1051. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 S.scrofa:73

F6VJS2              	100.00%		F1RWK8              	100.00%
                    	       		I3L5D3              	10.23%
                    	       		F1RWA1              	9.47%
Bootstrap support for F6VJS2 as seed ortholog is 100%.
Bootstrap support for F1RWK8 as seed ortholog is 94%.

Group of orthologs #1052. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 S.scrofa:545

F6WLN1              	100.00%		F1STJ9              	100.00%
Bootstrap support for F6WLN1 as seed ortholog is 100%.
Bootstrap support for F1STJ9 as seed ortholog is 100%.

Group of orthologs #1053. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 S.scrofa:544

F6TQI0              	100.00%		F1S5A6              	100.00%
F6TB46              	68.30%		
F6UUY2              	11.41%		
F6TQU2              	7.13%		
Bootstrap support for F6TQI0 as seed ortholog is 100%.
Bootstrap support for F1S5A6 as seed ortholog is 100%.

Group of orthologs #1054. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 S.scrofa:544

F6VWV8              	100.00%		F1S792              	100.00%
                    	       		F1SG45              	12.74%
Bootstrap support for F6VWV8 as seed ortholog is 100%.
Bootstrap support for F1S792 as seed ortholog is 100%.

Group of orthologs #1055. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 S.scrofa:465

F6W841              	100.00%		F1SRQ1              	100.00%
                    	       		O19004              	12.96%
Bootstrap support for F6W841 as seed ortholog is 100%.
Bootstrap support for F1SRQ1 as seed ortholog is 100%.

Group of orthologs #1056. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 S.scrofa:479

F6QRJ2              	100.00%		F1SQT3              	100.00%
Bootstrap support for F6QRJ2 as seed ortholog is 100%.
Bootstrap support for F1SQT3 as seed ortholog is 100%.

Group of orthologs #1057. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 S.scrofa:544

F7BHB2              	100.00%		F1S210              	100.00%
Bootstrap support for F7BHB2 as seed ortholog is 100%.
Bootstrap support for F1S210 as seed ortholog is 100%.

Group of orthologs #1058. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 S.scrofa:544

H2Y0L3              	100.00%		F1SCV6              	100.00%
Bootstrap support for H2Y0L3 as seed ortholog is 100%.
Bootstrap support for F1SCV6 as seed ortholog is 100%.

Group of orthologs #1059. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.scrofa:183

F6SPL0              	100.00%		Q4R1H1              	100.00%
F6XL13              	100.00%		D3JZR3              	100.00%
Bootstrap support for F6SPL0 as seed ortholog is 100%.
Bootstrap support for F6XL13 as seed ortholog is 99%.
Bootstrap support for Q4R1H1 as seed ortholog is 100%.
Bootstrap support for D3JZR3 as seed ortholog is 99%.

Group of orthologs #1060. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 S.scrofa:543

F6U7X2              	100.00%		F1SSZ7              	100.00%
                    	       		I3LMQ5              	8.11%
Bootstrap support for F6U7X2 as seed ortholog is 100%.
Bootstrap support for F1SSZ7 as seed ortholog is 100%.

Group of orthologs #1061. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 S.scrofa:543

F6ZVE7              	100.00%		F1SMG8              	100.00%
                    	       		O02734              	19.43%
Bootstrap support for F6ZVE7 as seed ortholog is 100%.
Bootstrap support for F1SMG8 as seed ortholog is 100%.

Group of orthologs #1062. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 S.scrofa:543

H2XK55              	100.00%		F1SIU0              	100.00%
H2Y2M6              	70.93%		
Bootstrap support for H2XK55 as seed ortholog is 100%.
Bootstrap support for F1SIU0 as seed ortholog is 100%.

Group of orthologs #1063. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 S.scrofa:491

F6S9F0              	100.00%		I3L739              	100.00%
Bootstrap support for F6S9F0 as seed ortholog is 100%.
Bootstrap support for I3L739 as seed ortholog is 100%.

Group of orthologs #1064. Best score 542 bits
Score difference with first non-orthologous sequence - C.intestinalis:542 S.scrofa:542

F6PYH8              	100.00%		F1RJH8              	100.00%
Bootstrap support for F6PYH8 as seed ortholog is 100%.
Bootstrap support for F1RJH8 as seed ortholog is 100%.

Group of orthologs #1065. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 S.scrofa:440

F6XT75              	100.00%		F1S2T4              	100.00%
Bootstrap support for F6XT75 as seed ortholog is 100%.
Bootstrap support for F1S2T4 as seed ortholog is 100%.

Group of orthologs #1066. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 S.scrofa:287

H2XV03              	100.00%		F1SGH0              	100.00%
                    	       		F1SLX4              	24.92%
Bootstrap support for H2XV03 as seed ortholog is 100%.
Bootstrap support for F1SGH0 as seed ortholog is 100%.

Group of orthologs #1067. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 S.scrofa:540

F6WCM9              	100.00%		F1RVA6              	100.00%
Bootstrap support for F6WCM9 as seed ortholog is 100%.
Bootstrap support for F1RVA6 as seed ortholog is 100%.

Group of orthologs #1068. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 S.scrofa:540

F6ZP25              	100.00%		F1RQM2              	100.00%
Bootstrap support for F6ZP25 as seed ortholog is 100%.
Bootstrap support for F1RQM2 as seed ortholog is 100%.

Group of orthologs #1069. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 S.scrofa:540

F6Z2X4              	100.00%		F1SPB5              	100.00%
Bootstrap support for F6Z2X4 as seed ortholog is 100%.
Bootstrap support for F1SPB5 as seed ortholog is 100%.

Group of orthologs #1070. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 S.scrofa:392

F7B7G6              	100.00%		F1SSH6              	100.00%
Bootstrap support for F7B7G6 as seed ortholog is 100%.
Bootstrap support for F1SSH6 as seed ortholog is 100%.

Group of orthologs #1071. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 S.scrofa:293

Q4H3K6              	100.00%		K7GKU3              	100.00%
F6QQF5              	82.07%		F1S3B8              	27.51%
Bootstrap support for Q4H3K6 as seed ortholog is 100%.
Bootstrap support for K7GKU3 as seed ortholog is 100%.

Group of orthologs #1072. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 S.scrofa:539

F6RMP9              	100.00%		F1S212              	100.00%
                    	       		Q767M4              	29.57%
Bootstrap support for F6RMP9 as seed ortholog is 100%.
Bootstrap support for F1S212 as seed ortholog is 100%.

Group of orthologs #1073. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 S.scrofa:72

F6SHN0              	100.00%		F1SI88              	100.00%
F6TSK2              	40.21%		
Bootstrap support for F6SHN0 as seed ortholog is 100%.
Bootstrap support for F1SI88 as seed ortholog is 93%.

Group of orthologs #1074. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.scrofa:19

F6X7T3              	100.00%		F1SK41              	100.00%
F6Y178              	7.95%		
Bootstrap support for F6X7T3 as seed ortholog is 99%.
Bootstrap support for F1SK41 as seed ortholog is 64%.
Alternative seed ortholog is F1SNA0 (19 bits away from this cluster)

Group of orthologs #1075. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 S.scrofa:539

F6PG92              	100.00%		F1S0X9              	100.00%
Bootstrap support for F6PG92 as seed ortholog is 100%.
Bootstrap support for F1S0X9 as seed ortholog is 100%.

Group of orthologs #1076. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 S.scrofa:430

H2XQR7              	100.00%		F1SU22              	100.00%
Bootstrap support for H2XQR7 as seed ortholog is 100%.
Bootstrap support for F1SU22 as seed ortholog is 100%.

Group of orthologs #1077. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 S.scrofa:539

F6W067              	100.00%		Q767L6              	100.00%
Bootstrap support for F6W067 as seed ortholog is 100%.
Bootstrap support for Q767L6 as seed ortholog is 100%.

Group of orthologs #1078. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 S.scrofa:424

F7A4A9              	100.00%		F1S3M9              	100.00%
                    	       		F1S485              	13.33%
                    	       		F1SM86              	8.03%
                    	       		F1STL6              	5.12%
Bootstrap support for F7A4A9 as seed ortholog is 100%.
Bootstrap support for F1S3M9 as seed ortholog is 100%.

Group of orthologs #1079. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 S.scrofa:538

F6SI87              	100.00%		F1S166              	100.00%
                    	       		F1RMH7              	39.39%
Bootstrap support for F6SI87 as seed ortholog is 100%.
Bootstrap support for F1S166 as seed ortholog is 100%.

Group of orthologs #1080. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 S.scrofa:538

F7BBJ9              	100.00%		F1SGH5              	100.00%
Bootstrap support for F7BBJ9 as seed ortholog is 100%.
Bootstrap support for F1SGH5 as seed ortholog is 100%.

Group of orthologs #1081. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 S.scrofa:537

F6SDP7              	100.00%		F1SLQ6              	100.00%
F7AAV2              	18.77%		
Bootstrap support for F6SDP7 as seed ortholog is 100%.
Bootstrap support for F1SLQ6 as seed ortholog is 100%.

Group of orthologs #1082. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 S.scrofa:537

F7BLS5              	100.00%		F1RXA7              	100.00%
                    	       		I3LL55              	60.12%
Bootstrap support for F7BLS5 as seed ortholog is 100%.
Bootstrap support for F1RXA7 as seed ortholog is 100%.

Group of orthologs #1083. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 S.scrofa:537

F7B2Q7              	100.00%		P07802              	100.00%
                    	       		F1RIY9              	25.47%
Bootstrap support for F7B2Q7 as seed ortholog is 100%.
Bootstrap support for P07802 as seed ortholog is 100%.

Group of orthologs #1084. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 S.scrofa:393

F6SGJ4              	100.00%		F1RT96              	100.00%
Bootstrap support for F6SGJ4 as seed ortholog is 100%.
Bootstrap support for F1RT96 as seed ortholog is 100%.

Group of orthologs #1085. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 S.scrofa:446

F6TTI3              	100.00%		I3L945              	100.00%
Bootstrap support for F6TTI3 as seed ortholog is 100%.
Bootstrap support for I3L945 as seed ortholog is 100%.

Group of orthologs #1086. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 S.scrofa:252

F6ZL94              	100.00%		I3L9C1              	100.00%
Bootstrap support for F6ZL94 as seed ortholog is 100%.
Bootstrap support for I3L9C1 as seed ortholog is 100%.

Group of orthologs #1087. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 S.scrofa:359

H2XVD0              	100.00%		Q29099              	100.00%
                    	       		Q06A95              	43.67%
Bootstrap support for H2XVD0 as seed ortholog is 100%.
Bootstrap support for Q29099 as seed ortholog is 100%.

Group of orthologs #1088. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 S.scrofa:535

F6UK15              	100.00%		F1SSN0              	100.00%
                    	       		F1RSJ9              	26.53%
                    	       		F1SHA1              	8.84%
Bootstrap support for F6UK15 as seed ortholog is 100%.
Bootstrap support for F1SSN0 as seed ortholog is 100%.

Group of orthologs #1089. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 S.scrofa:453

F6Y9D9              	100.00%		F1RZH3              	100.00%
Bootstrap support for F6Y9D9 as seed ortholog is 100%.
Bootstrap support for F1RZH3 as seed ortholog is 100%.

Group of orthologs #1090. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 S.scrofa:82

F6XDI5              	100.00%		F2Z5H6              	100.00%
Bootstrap support for F6XDI5 as seed ortholog is 100%.
Bootstrap support for F2Z5H6 as seed ortholog is 99%.

Group of orthologs #1091. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 S.scrofa:535

H2Y2U9              	100.00%		F1RNY3              	100.00%
Bootstrap support for H2Y2U9 as seed ortholog is 100%.
Bootstrap support for F1RNY3 as seed ortholog is 100%.

Group of orthologs #1092. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 S.scrofa:535

F6UVK0              	100.00%		Q2TLZ2              	100.00%
Bootstrap support for F6UVK0 as seed ortholog is 100%.
Bootstrap support for Q2TLZ2 as seed ortholog is 100%.

Group of orthologs #1093. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 S.scrofa:534

F6TT01              	100.00%		F1RYL5              	100.00%
Bootstrap support for F6TT01 as seed ortholog is 100%.
Bootstrap support for F1RYL5 as seed ortholog is 100%.

Group of orthologs #1094. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:83

H2XP37              	100.00%		F1RZK6              	100.00%
Bootstrap support for H2XP37 as seed ortholog is 99%.
Bootstrap support for F1RZK6 as seed ortholog is 97%.

Group of orthologs #1095. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 S.scrofa:148

H2XXZ7              	100.00%		P00355              	100.00%
Bootstrap support for H2XXZ7 as seed ortholog is 100%.
Bootstrap support for P00355 as seed ortholog is 100%.

Group of orthologs #1096. Best score 533 bits
Score difference with first non-orthologous sequence - C.intestinalis:533 S.scrofa:533

H2XLP3              	100.00%		F1RPQ3              	100.00%
Bootstrap support for H2XLP3 as seed ortholog is 100%.
Bootstrap support for F1RPQ3 as seed ortholog is 100%.

Group of orthologs #1097. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.scrofa:371

F6VJT7              	100.00%		A5A4L7              	100.00%
F7BLJ0              	9.35%		F1RP40              	11.54%
Bootstrap support for F6VJT7 as seed ortholog is 95%.
Bootstrap support for A5A4L7 as seed ortholog is 100%.

Group of orthologs #1098. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 S.scrofa:532

F6U1G1              	100.00%		F1RUJ4              	100.00%
                    	       		F1SGN8              	27.04%
Bootstrap support for F6U1G1 as seed ortholog is 100%.
Bootstrap support for F1RUJ4 as seed ortholog is 100%.

Group of orthologs #1099. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 S.scrofa:45

F6UJI9              	100.00%		F1S565              	100.00%
Bootstrap support for F6UJI9 as seed ortholog is 100%.
Bootstrap support for F1S565 as seed ortholog is 89%.

Group of orthologs #1100. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 S.scrofa:532

F6XUA1              	100.00%		F1RVX9              	100.00%
Bootstrap support for F6XUA1 as seed ortholog is 100%.
Bootstrap support for F1RVX9 as seed ortholog is 100%.

Group of orthologs #1101. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 S.scrofa:532

F6YAH3              	100.00%		F1SBS1              	100.00%
Bootstrap support for F6YAH3 as seed ortholog is 100%.
Bootstrap support for F1SBS1 as seed ortholog is 100%.

Group of orthologs #1102. Best score 531 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 S.scrofa:476

F6TJJ7              	100.00%		I3LII4              	100.00%
Bootstrap support for F6TJJ7 as seed ortholog is 100%.
Bootstrap support for I3LII4 as seed ortholog is 100%.

Group of orthologs #1103. Best score 531 bits
Score difference with first non-orthologous sequence - C.intestinalis:531 S.scrofa:531

F6V766              	100.00%		I3LKW5              	100.00%
Bootstrap support for F6V766 as seed ortholog is 100%.
Bootstrap support for I3LKW5 as seed ortholog is 100%.

Group of orthologs #1104. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 S.scrofa:80

F6PKL5              	100.00%		F1SE73              	100.00%
                    	       		Q864B5              	28.23%
Bootstrap support for F6PKL5 as seed ortholog is 100%.
Bootstrap support for F1SE73 as seed ortholog is 98%.

Group of orthologs #1105. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.scrofa:166

F6WPZ9              	100.00%		F1RP99              	100.00%
Bootstrap support for F6WPZ9 as seed ortholog is 100%.
Bootstrap support for F1RP99 as seed ortholog is 99%.

Group of orthologs #1106. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:75

F6TJL2              	100.00%		F1S4H3              	100.00%
Bootstrap support for F6TJL2 as seed ortholog is 77%.
Bootstrap support for F1S4H3 as seed ortholog is 97%.

Group of orthologs #1107. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 S.scrofa:530

F6XK10              	100.00%		F1SNZ5              	100.00%
Bootstrap support for F6XK10 as seed ortholog is 100%.
Bootstrap support for F1SNZ5 as seed ortholog is 100%.

Group of orthologs #1108. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 S.scrofa:244

F6S4Q0              	100.00%		I3LP02              	100.00%
Bootstrap support for F6S4Q0 as seed ortholog is 100%.
Bootstrap support for I3LP02 as seed ortholog is 100%.

Group of orthologs #1109. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 S.scrofa:530

F7B059              	100.00%		I3LFS8              	100.00%
Bootstrap support for F7B059 as seed ortholog is 100%.
Bootstrap support for I3LFS8 as seed ortholog is 100%.

Group of orthologs #1110. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 S.scrofa:292

H2XQB4              	100.00%		F1SG28              	100.00%
                    	       		I3LD92              	100.00%
                    	       		F1SH09              	36.59%
                    	       		I3LVN7              	29.13%
                    	       		F1RSW0              	27.68%
Bootstrap support for H2XQB4 as seed ortholog is 100%.
Bootstrap support for F1SG28 as seed ortholog is 100%.
Bootstrap support for I3LD92 as seed ortholog is 100%.

Group of orthologs #1111. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 S.scrofa:529

F6UVC2              	100.00%		F1STD8              	100.00%
                    	       		F1RRG5              	10.57%
Bootstrap support for F6UVC2 as seed ortholog is 100%.
Bootstrap support for F1STD8 as seed ortholog is 100%.

Group of orthologs #1112. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 S.scrofa:529

F6Q989              	100.00%		I7GF95              	100.00%
                    	       		I3L545              	73.07%
Bootstrap support for F6Q989 as seed ortholog is 100%.
Bootstrap support for I7GF95 as seed ortholog is 100%.

Group of orthologs #1113. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 S.scrofa:529

F6X4W9              	100.00%		P79303              	100.00%
                    	       		F1SIX3              	64.03%
Bootstrap support for F6X4W9 as seed ortholog is 100%.
Bootstrap support for P79303 as seed ortholog is 100%.

Group of orthologs #1114. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 S.scrofa:529

F6XUD5              	100.00%		F1RN05              	100.00%
Bootstrap support for F6XUD5 as seed ortholog is 100%.
Bootstrap support for F1RN05 as seed ortholog is 100%.

Group of orthologs #1115. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 S.scrofa:529

F6ZFJ9              	100.00%		F1RPE8              	100.00%
Bootstrap support for F6ZFJ9 as seed ortholog is 100%.
Bootstrap support for F1RPE8 as seed ortholog is 100%.

Group of orthologs #1116. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 S.scrofa:529

F6RZH2              	100.00%		F1SQR3              	100.00%
Bootstrap support for F6RZH2 as seed ortholog is 100%.
Bootstrap support for F1SQR3 as seed ortholog is 100%.

Group of orthologs #1117. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 S.scrofa:529

F6QDE3              	100.00%		I3LND5              	100.00%
Bootstrap support for F6QDE3 as seed ortholog is 100%.
Bootstrap support for I3LND5 as seed ortholog is 100%.

Group of orthologs #1118. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 S.scrofa:473

F6YK29              	100.00%		P53590              	100.00%
Bootstrap support for F6YK29 as seed ortholog is 100%.
Bootstrap support for P53590 as seed ortholog is 100%.

Group of orthologs #1119. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 S.scrofa:528

F6XEQ3              	100.00%		F1RWY1              	100.00%
                    	       		F1RRB5              	16.64%
                    	       		F1RHC9              	8.79%
Bootstrap support for F6XEQ3 as seed ortholog is 100%.
Bootstrap support for F1RWY1 as seed ortholog is 100%.

Group of orthologs #1120. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 S.scrofa:139

F6U4H3              	100.00%		F1SQH7              	100.00%
                    	       		F1RKK0              	13.73%
Bootstrap support for F6U4H3 as seed ortholog is 100%.
Bootstrap support for F1SQH7 as seed ortholog is 99%.

Group of orthologs #1121. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 S.scrofa:528

H2XME0              	100.00%		F1RLS1              	100.00%
Bootstrap support for H2XME0 as seed ortholog is 100%.
Bootstrap support for F1RLS1 as seed ortholog is 100%.

Group of orthologs #1122. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 S.scrofa:528

H2XRG4              	100.00%		F1SK25              	100.00%
Bootstrap support for H2XRG4 as seed ortholog is 100%.
Bootstrap support for F1SK25 as seed ortholog is 100%.

Group of orthologs #1123. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:527 S.scrofa:192

F6QQX7              	100.00%		F1S8B6              	100.00%
                    	       		I3LUK3              	32.13%
Bootstrap support for F6QQX7 as seed ortholog is 100%.
Bootstrap support for F1S8B6 as seed ortholog is 100%.

Group of orthologs #1124. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:527 S.scrofa:527

F6V6M0              	100.00%		F1STE9              	100.00%
Bootstrap support for F6V6M0 as seed ortholog is 100%.
Bootstrap support for F1STE9 as seed ortholog is 100%.

Group of orthologs #1125. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:527 S.scrofa:527

Q1RPV0              	100.00%		F1RF31              	100.00%
Bootstrap support for Q1RPV0 as seed ortholog is 100%.
Bootstrap support for F1RF31 as seed ortholog is 100%.

Group of orthologs #1126. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:526 S.scrofa:272

F6WVW2              	100.00%		F1SFM3              	100.00%
                    	       		F1S293              	17.05%
Bootstrap support for F6WVW2 as seed ortholog is 100%.
Bootstrap support for F1SFM3 as seed ortholog is 99%.

Group of orthologs #1127. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:526 S.scrofa:465

F6ZAH0              	100.00%		F1S260              	100.00%
Bootstrap support for F6ZAH0 as seed ortholog is 100%.
Bootstrap support for F1S260 as seed ortholog is 100%.

Group of orthologs #1128. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:526 S.scrofa:319

F7AJ78              	100.00%		F1SND2              	100.00%
Bootstrap support for F7AJ78 as seed ortholog is 100%.
Bootstrap support for F1SND2 as seed ortholog is 100%.

Group of orthologs #1129. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 S.scrofa:525

Q9NL46              	100.00%		I3L7A6              	100.00%
                    	       		I3LNW9              	34.18%
                    	       		F1RJE5              	28.89%
Bootstrap support for Q9NL46 as seed ortholog is 100%.
Bootstrap support for I3L7A6 as seed ortholog is 100%.

Group of orthologs #1130. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 S.scrofa:140

H2XZZ6              	100.00%		I3LPD2              	100.00%
                    	       		F1SIN8              	12.54%
Bootstrap support for H2XZZ6 as seed ortholog is 100%.
Bootstrap support for I3LPD2 as seed ortholog is 99%.

Group of orthologs #1131. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 S.scrofa:525

F6WQG9              	100.00%		F1RL41              	100.00%
Bootstrap support for F6WQG9 as seed ortholog is 100%.
Bootstrap support for F1RL41 as seed ortholog is 100%.

Group of orthologs #1132. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 S.scrofa:525

F6XLS2              	100.00%		F1SFD0              	100.00%
Bootstrap support for F6XLS2 as seed ortholog is 100%.
Bootstrap support for F1SFD0 as seed ortholog is 100%.

Group of orthologs #1133. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 S.scrofa:525

H2Y005              	100.00%		F1RFY4              	100.00%
Bootstrap support for H2Y005 as seed ortholog is 100%.
Bootstrap support for F1RFY4 as seed ortholog is 100%.

Group of orthologs #1134. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 S.scrofa:524

F6R5G5              	100.00%		F1RV67              	100.00%
Bootstrap support for F6R5G5 as seed ortholog is 100%.
Bootstrap support for F1RV67 as seed ortholog is 100%.

Group of orthologs #1135. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 S.scrofa:524

F6PYJ8              	100.00%		F1SKG5              	100.00%
Bootstrap support for F6PYJ8 as seed ortholog is 100%.
Bootstrap support for F1SKG5 as seed ortholog is 100%.

Group of orthologs #1136. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 S.scrofa:256

F6UIV5              	100.00%		F1S9I3              	100.00%
Bootstrap support for F6UIV5 as seed ortholog is 100%.
Bootstrap support for F1S9I3 as seed ortholog is 100%.

Group of orthologs #1137. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 S.scrofa:179

H2XQ32              	100.00%		I3LED8              	100.00%
Bootstrap support for H2XQ32 as seed ortholog is 100%.
Bootstrap support for I3LED8 as seed ortholog is 99%.

Group of orthologs #1138. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:386

F6WZV6              	100.00%		F1RLJ6              	100.00%
                    	       		I3LM09              	53.21%
                    	       		F1SIC3              	41.40%
                    	       		I3LEM3              	27.60%
Bootstrap support for F6WZV6 as seed ortholog is 99%.
Bootstrap support for F1RLJ6 as seed ortholog is 100%.

Group of orthologs #1139. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 S.scrofa:344

F6R9S1              	100.00%		F1RWL1              	100.00%
Bootstrap support for F6R9S1 as seed ortholog is 100%.
Bootstrap support for F1RWL1 as seed ortholog is 100%.

Group of orthologs #1140. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:523 S.scrofa:523

F6XWY9              	100.00%		F1RRT1              	100.00%
Bootstrap support for F6XWY9 as seed ortholog is 100%.
Bootstrap support for F1RRT1 as seed ortholog is 100%.

Group of orthologs #1141. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:523 S.scrofa:523

F6ZZ65              	100.00%		F1RU51              	100.00%
Bootstrap support for F6ZZ65 as seed ortholog is 100%.
Bootstrap support for F1RU51 as seed ortholog is 100%.

Group of orthologs #1142. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:523 S.scrofa:523

F6W673              	100.00%		F1SKJ0              	100.00%
Bootstrap support for F6W673 as seed ortholog is 100%.
Bootstrap support for F1SKJ0 as seed ortholog is 100%.

Group of orthologs #1143. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 S.scrofa:522

H2XX22              	100.00%		F1RZ72              	100.00%
                    	       		F1RL83              	49.48%
                    	       		F1SKL5              	16.84%
Bootstrap support for H2XX22 as seed ortholog is 100%.
Bootstrap support for F1RZ72 as seed ortholog is 100%.

Group of orthologs #1144. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 S.scrofa:522

F6WWX5              	100.00%		F1RW09              	100.00%
Bootstrap support for F6WWX5 as seed ortholog is 100%.
Bootstrap support for F1RW09 as seed ortholog is 100%.

Group of orthologs #1145. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 S.scrofa:522

H2Y164              	100.00%		F1S8Q4              	100.00%
Bootstrap support for H2Y164 as seed ortholog is 100%.
Bootstrap support for F1S8Q4 as seed ortholog is 100%.

Group of orthologs #1146. Best score 521 bits
Score difference with first non-orthologous sequence - C.intestinalis:521 S.scrofa:521

H2XMI3              	100.00%		F1S3F7              	100.00%
                    	       		F1S3G9              	99.71%
Bootstrap support for H2XMI3 as seed ortholog is 100%.
Bootstrap support for F1S3F7 as seed ortholog is 100%.

Group of orthologs #1147. Best score 521 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.scrofa:232

F6SZT6              	100.00%		P22411              	100.00%
                    	       		F1RPQ0              	30.48%
Bootstrap support for F6SZT6 as seed ortholog is 89%.
Bootstrap support for P22411 as seed ortholog is 99%.

Group of orthologs #1148. Best score 521 bits
Score difference with first non-orthologous sequence - C.intestinalis:521 S.scrofa:521

F7AAA7              	100.00%		F1S8X7              	100.00%
Bootstrap support for F7AAA7 as seed ortholog is 100%.
Bootstrap support for F1S8X7 as seed ortholog is 100%.

Group of orthologs #1149. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 S.scrofa:219

F6U8Z7              	100.00%		D0G0B3              	100.00%
Bootstrap support for F6U8Z7 as seed ortholog is 100%.
Bootstrap support for D0G0B3 as seed ortholog is 100%.

Group of orthologs #1150. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 S.scrofa:520

F6PHN1              	100.00%		F1STC0              	100.00%
Bootstrap support for F6PHN1 as seed ortholog is 100%.
Bootstrap support for F1STC0 as seed ortholog is 100%.

Group of orthologs #1151. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 S.scrofa:119

F6TGX2              	100.00%		F2Z5Q5              	100.00%
Bootstrap support for F6TGX2 as seed ortholog is 100%.
Bootstrap support for F2Z5Q5 as seed ortholog is 100%.

Group of orthologs #1152. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 S.scrofa:520

F7AWI9              	100.00%		F1S857              	100.00%
Bootstrap support for F7AWI9 as seed ortholog is 100%.
Bootstrap support for F1S857 as seed ortholog is 100%.

Group of orthologs #1153. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 S.scrofa:520

H2XQE4              	100.00%		F1S8H4              	100.00%
Bootstrap support for H2XQE4 as seed ortholog is 100%.
Bootstrap support for F1S8H4 as seed ortholog is 100%.

Group of orthologs #1154. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 S.scrofa:520

F6R4D8              	100.00%		I3LQ69              	100.00%
Bootstrap support for F6R4D8 as seed ortholog is 100%.
Bootstrap support for I3LQ69 as seed ortholog is 100%.

Group of orthologs #1155. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 S.scrofa:424

F6ZAX4              	100.00%		F1STU8              	100.00%
Bootstrap support for F6ZAX4 as seed ortholog is 100%.
Bootstrap support for F1STU8 as seed ortholog is 100%.

Group of orthologs #1156. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 S.scrofa:390

F6SK29              	100.00%		P63246              	100.00%
Bootstrap support for F6SK29 as seed ortholog is 100%.
Bootstrap support for P63246 as seed ortholog is 100%.

Group of orthologs #1157. Best score 519 bits
Score difference with first non-orthologous sequence - C.intestinalis:519 S.scrofa:519

Q1RLE3              	100.00%		F1SUV2              	100.00%
                    	       		F1S4M1              	15.37%
                    	       		F1RM54              	9.24%
Bootstrap support for Q1RLE3 as seed ortholog is 100%.
Bootstrap support for F1SUV2 as seed ortholog is 100%.

Group of orthologs #1158. Best score 519 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 S.scrofa:79

H2Y369              	100.00%		I3LKJ1              	100.00%
                    	       		F1RNC8              	67.80%
                    	       		F1RGN5              	12.91%
Bootstrap support for H2Y369 as seed ortholog is 45%.
Alternative seed ortholog is F7AHM9 (4 bits away from this cluster)
Bootstrap support for I3LKJ1 as seed ortholog is 95%.

Group of orthologs #1159. Best score 519 bits
Score difference with first non-orthologous sequence - C.intestinalis:519 S.scrofa:519

F7APB5              	100.00%		A1YIZ1              	100.00%
Bootstrap support for F7APB5 as seed ortholog is 100%.
Bootstrap support for A1YIZ1 as seed ortholog is 100%.

Group of orthologs #1160. Best score 519 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 S.scrofa:369

F7AXN3              	100.00%		F1SCG7              	100.00%
Bootstrap support for F7AXN3 as seed ortholog is 100%.
Bootstrap support for F1SCG7 as seed ortholog is 100%.

Group of orthologs #1161. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.scrofa:82

F6SCX5              	100.00%		Q5CD18              	100.00%
                    	       		I3LFU7              	87.18%
                    	       		D3K5N5              	34.17%
                    	       		F1RPT9              	24.27%
Bootstrap support for F6SCX5 as seed ortholog is 99%.
Bootstrap support for Q5CD18 as seed ortholog is 96%.

Group of orthologs #1162. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 S.scrofa:154

Q1RL93              	100.00%		F1S429              	100.00%
                    	       		F1SUI7              	100.00%
Bootstrap support for Q1RL93 as seed ortholog is 100%.
Bootstrap support for F1S429 as seed ortholog is 99%.
Bootstrap support for F1SUI7 as seed ortholog is 99%.

Group of orthologs #1163. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:518 S.scrofa:518

F6VZQ9              	100.00%		F1S154              	100.00%
Bootstrap support for F6VZQ9 as seed ortholog is 100%.
Bootstrap support for F1S154 as seed ortholog is 100%.

Group of orthologs #1164. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 S.scrofa:423

F6SML9              	100.00%		A5GFW3              	100.00%
Bootstrap support for F6SML9 as seed ortholog is 100%.
Bootstrap support for A5GFW3 as seed ortholog is 100%.

Group of orthologs #1165. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 S.scrofa:421

F6S3E0              	100.00%		F1RZ89              	100.00%
Bootstrap support for F6S3E0 as seed ortholog is 100%.
Bootstrap support for F1RZ89 as seed ortholog is 100%.

Group of orthologs #1166. Best score 516 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:180

F6TIF0              	100.00%		F1RN62              	100.00%
Bootstrap support for F6TIF0 as seed ortholog is 93%.
Bootstrap support for F1RN62 as seed ortholog is 99%.

Group of orthologs #1167. Best score 516 bits
Score difference with first non-orthologous sequence - C.intestinalis:516 S.scrofa:516

F6RMT1              	100.00%		F1S9C2              	100.00%
Bootstrap support for F6RMT1 as seed ortholog is 100%.
Bootstrap support for F1S9C2 as seed ortholog is 100%.

Group of orthologs #1168. Best score 516 bits
Score difference with first non-orthologous sequence - C.intestinalis:516 S.scrofa:211

F6SXS1              	100.00%		F1SS95              	100.00%
Bootstrap support for F6SXS1 as seed ortholog is 100%.
Bootstrap support for F1SS95 as seed ortholog is 99%.

Group of orthologs #1169. Best score 516 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 S.scrofa:297

F7B1X4              	100.00%		Q5H7C0              	100.00%
Bootstrap support for F7B1X4 as seed ortholog is 100%.
Bootstrap support for Q5H7C0 as seed ortholog is 100%.

Group of orthologs #1170. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 S.scrofa:131

F6UDY1              	100.00%		F1S849              	100.00%
                    	       		F1S8W6              	8.95%
Bootstrap support for F6UDY1 as seed ortholog is 100%.
Bootstrap support for F1S849 as seed ortholog is 99%.

Group of orthologs #1171. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 S.scrofa:515

F6XL41              	100.00%		Q9GMB0              	100.00%
Bootstrap support for F6XL41 as seed ortholog is 100%.
Bootstrap support for Q9GMB0 as seed ortholog is 100%.

Group of orthologs #1172. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 S.scrofa:452

F6TSM0              	100.00%		F1RJW8              	100.00%
                    	       		F1SPW0              	53.93%
Bootstrap support for F6TSM0 as seed ortholog is 100%.
Bootstrap support for F1RJW8 as seed ortholog is 100%.

Group of orthologs #1173. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 S.scrofa:514

F6ZFE0              	100.00%		F1SDX2              	100.00%
Bootstrap support for F6ZFE0 as seed ortholog is 100%.
Bootstrap support for F1SDX2 as seed ortholog is 100%.

Group of orthologs #1174. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 S.scrofa:514

H2XTB8              	100.00%		F1SHH7              	100.00%
Bootstrap support for H2XTB8 as seed ortholog is 100%.
Bootstrap support for F1SHH7 as seed ortholog is 100%.

Group of orthologs #1175. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:513 S.scrofa:165

F7BLL7              	100.00%		F1S6C5              	100.00%
                    	       		F1S6C6              	26.70%
                    	       		I3LVS2              	7.56%
Bootstrap support for F7BLL7 as seed ortholog is 100%.
Bootstrap support for F1S6C5 as seed ortholog is 99%.

Group of orthologs #1176. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:513 S.scrofa:449

F6WLA0              	100.00%		F1RX12              	100.00%
Bootstrap support for F6WLA0 as seed ortholog is 100%.
Bootstrap support for F1RX12 as seed ortholog is 100%.

Group of orthologs #1177. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:513 S.scrofa:513

F6PPP3              	100.00%		I3LC39              	100.00%
Bootstrap support for F6PPP3 as seed ortholog is 100%.
Bootstrap support for I3LC39 as seed ortholog is 100%.

Group of orthologs #1178. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:513 S.scrofa:513

H2Y2K2              	100.00%		F1S7S8              	100.00%
Bootstrap support for H2Y2K2 as seed ortholog is 100%.
Bootstrap support for F1S7S8 as seed ortholog is 100%.

Group of orthologs #1179. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 S.scrofa:440

H2Y1I8              	100.00%		F1RUT9              	100.00%
                    	       		I3LQA5              	24.46%
Bootstrap support for H2Y1I8 as seed ortholog is 99%.
Bootstrap support for F1RUT9 as seed ortholog is 100%.

Group of orthologs #1180. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 S.scrofa:434

F6ZUV7              	100.00%		F2Z593              	100.00%
                    	       		F2Z5C6              	82.88%
Bootstrap support for F6ZUV7 as seed ortholog is 100%.
Bootstrap support for F2Z593 as seed ortholog is 100%.

Group of orthologs #1181. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 S.scrofa:443

F6XN50              	100.00%		F1RGI0              	100.00%
Bootstrap support for F6XN50 as seed ortholog is 100%.
Bootstrap support for F1RGI0 as seed ortholog is 100%.

Group of orthologs #1182. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 S.scrofa:464

F6UZU2              	100.00%		F1STS7              	100.00%
Bootstrap support for F6UZU2 as seed ortholog is 100%.
Bootstrap support for F1STS7 as seed ortholog is 100%.

Group of orthologs #1183. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:511 S.scrofa:511

F6W6K9              	100.00%		F1RRD7              	100.00%
Bootstrap support for F6W6K9 as seed ortholog is 100%.
Bootstrap support for F1RRD7 as seed ortholog is 100%.

Group of orthologs #1184. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:511 S.scrofa:511

F6ZZH3              	100.00%		F1RNH3              	100.00%
Bootstrap support for F6ZZH3 as seed ortholog is 100%.
Bootstrap support for F1RNH3 as seed ortholog is 100%.

Group of orthologs #1185. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 S.scrofa:309

Q8T883              	100.00%		F1SV60              	100.00%
Bootstrap support for Q8T883 as seed ortholog is 100%.
Bootstrap support for F1SV60 as seed ortholog is 100%.

Group of orthologs #1186. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 S.scrofa:510

F7ABT2              	100.00%		F1SPK1              	100.00%
                    	       		F1S2A0              	12.22%
Bootstrap support for F7ABT2 as seed ortholog is 100%.
Bootstrap support for F1SPK1 as seed ortholog is 100%.

Group of orthologs #1187. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 S.scrofa:455

F6ZXB2              	100.00%		F1RJA7              	100.00%
Bootstrap support for F6ZXB2 as seed ortholog is 100%.
Bootstrap support for F1RJA7 as seed ortholog is 100%.

Group of orthologs #1188. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 S.scrofa:510

F6TD07              	100.00%		F1SEX8              	100.00%
Bootstrap support for F6TD07 as seed ortholog is 100%.
Bootstrap support for F1SEX8 as seed ortholog is 100%.

Group of orthologs #1189. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 S.scrofa:510

F6Z672              	100.00%		F1SUG1              	100.00%
Bootstrap support for F6Z672 as seed ortholog is 100%.
Bootstrap support for F1SUG1 as seed ortholog is 100%.

Group of orthologs #1190. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 S.scrofa:510

H2XP55              	100.00%		I3LTH2              	100.00%
Bootstrap support for H2XP55 as seed ortholog is 100%.
Bootstrap support for I3LTH2 as seed ortholog is 100%.

Group of orthologs #1191. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:509 S.scrofa:509

F6YW68              	100.00%		I3L652              	100.00%
                    	       		F1S8W9              	50.00%
Bootstrap support for F6YW68 as seed ortholog is 100%.
Bootstrap support for I3L652 as seed ortholog is 100%.

Group of orthologs #1192. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:509 S.scrofa:509

F6YFB9              	100.00%		F1S5K6              	100.00%
Bootstrap support for F6YFB9 as seed ortholog is 100%.
Bootstrap support for F1S5K6 as seed ortholog is 100%.

Group of orthologs #1193. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:509 S.scrofa:509

F6Z3S5              	100.00%		F1SQR6              	100.00%
Bootstrap support for F6Z3S5 as seed ortholog is 100%.
Bootstrap support for F1SQR6 as seed ortholog is 100%.

Group of orthologs #1194. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 S.scrofa:179

F6S8U4              	100.00%		I3LRT4              	100.00%
Bootstrap support for F6S8U4 as seed ortholog is 100%.
Bootstrap support for I3LRT4 as seed ortholog is 100%.

Group of orthologs #1195. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:509 S.scrofa:173

F6YXW3              	100.00%		I3LCC0              	100.00%
Bootstrap support for F6YXW3 as seed ortholog is 100%.
Bootstrap support for I3LCC0 as seed ortholog is 99%.

Group of orthologs #1196. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 S.scrofa:267

F6PUP9              	100.00%		F1RN06              	100.00%
F6Z4E6              	23.89%		F1S815              	40.92%
Bootstrap support for F6PUP9 as seed ortholog is 100%.
Bootstrap support for F1RN06 as seed ortholog is 100%.

Group of orthologs #1197. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 S.scrofa:168

F7B684              	100.00%		F1RR85              	100.00%
                    	       		F6Q413              	16.43%
Bootstrap support for F7B684 as seed ortholog is 100%.
Bootstrap support for F1RR85 as seed ortholog is 99%.

Group of orthologs #1198. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 S.scrofa:508

F6SUM0              	100.00%		P80147              	100.00%
F7AAH8              	28.82%		
Bootstrap support for F6SUM0 as seed ortholog is 100%.
Bootstrap support for P80147 as seed ortholog is 100%.

Group of orthologs #1199. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 S.scrofa:390

F6TDZ5              	100.00%		F1RVV9              	100.00%
Bootstrap support for F6TDZ5 as seed ortholog is 100%.
Bootstrap support for F1RVV9 as seed ortholog is 100%.

Group of orthologs #1200. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 S.scrofa:508

F6WAW7              	100.00%		F1RSR4              	100.00%
Bootstrap support for F6WAW7 as seed ortholog is 100%.
Bootstrap support for F1RSR4 as seed ortholog is 100%.

Group of orthologs #1201. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 S.scrofa:508

F6U397              	100.00%		F1S6P4              	100.00%
Bootstrap support for F6U397 as seed ortholog is 100%.
Bootstrap support for F1S6P4 as seed ortholog is 100%.

Group of orthologs #1202. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 S.scrofa:508

F6V9Y2              	100.00%		F1SQ59              	100.00%
Bootstrap support for F6V9Y2 as seed ortholog is 100%.
Bootstrap support for F1SQ59 as seed ortholog is 100%.

Group of orthologs #1203. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.scrofa:507

F6TNQ8              	100.00%		F1RW01              	100.00%
Bootstrap support for F6TNQ8 as seed ortholog is 99%.
Bootstrap support for F1RW01 as seed ortholog is 100%.

Group of orthologs #1204. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 S.scrofa:507

F6QQ57              	100.00%		F1STS5              	100.00%
Bootstrap support for F6QQ57 as seed ortholog is 100%.
Bootstrap support for F1STS5 as seed ortholog is 100%.

Group of orthologs #1205. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 S.scrofa:507

F6TT57              	100.00%		F1SKP4              	100.00%
Bootstrap support for F6TT57 as seed ortholog is 100%.
Bootstrap support for F1SKP4 as seed ortholog is 100%.

Group of orthologs #1206. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 S.scrofa:507

F6UGN5              	100.00%		F2Z5T0              	100.00%
Bootstrap support for F6UGN5 as seed ortholog is 100%.
Bootstrap support for F2Z5T0 as seed ortholog is 100%.

Group of orthologs #1207. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 S.scrofa:416

H2XSA6              	100.00%		F1RVR8              	100.00%
Bootstrap support for H2XSA6 as seed ortholog is 100%.
Bootstrap support for F1RVR8 as seed ortholog is 100%.

Group of orthologs #1208. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 S.scrofa:150

H2Y071              	100.00%		I3LQZ3              	100.00%
Bootstrap support for H2Y071 as seed ortholog is 100%.
Bootstrap support for I3LQZ3 as seed ortholog is 97%.

Group of orthologs #1209. Best score 506 bits
Score difference with first non-orthologous sequence - C.intestinalis:506 S.scrofa:361

F6SIX8              	100.00%		F1RL85              	100.00%
Bootstrap support for F6SIX8 as seed ortholog is 100%.
Bootstrap support for F1RL85 as seed ortholog is 100%.

Group of orthologs #1210. Best score 506 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 S.scrofa:506

Q8T8A6              	100.00%		F1SGE5              	100.00%
Bootstrap support for Q8T8A6 as seed ortholog is 66%.
Alternative seed ortholog is F6XVB0 (18 bits away from this cluster)
Bootstrap support for F1SGE5 as seed ortholog is 100%.

Group of orthologs #1211. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 S.scrofa:132

F6VKI2              	100.00%		F1RVS3              	100.00%
                    	       		F1RXP3              	16.98%
Bootstrap support for F6VKI2 as seed ortholog is 100%.
Bootstrap support for F1RVS3 as seed ortholog is 99%.

Group of orthologs #1212. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 S.scrofa:22

F6R798              	100.00%		F1RFX4              	100.00%
Bootstrap support for F6R798 as seed ortholog is 100%.
Bootstrap support for F1RFX4 as seed ortholog is 70%.
Alternative seed ortholog is P48762 (22 bits away from this cluster)

Group of orthologs #1213. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 S.scrofa:429

F6X1K6              	100.00%		F1SJR6              	100.00%
Bootstrap support for F6X1K6 as seed ortholog is 100%.
Bootstrap support for F1SJR6 as seed ortholog is 100%.

Group of orthologs #1214. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 S.scrofa:505

F6VUM2              	100.00%		P46410              	100.00%
Bootstrap support for F6VUM2 as seed ortholog is 100%.
Bootstrap support for P46410 as seed ortholog is 100%.

Group of orthologs #1215. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 S.scrofa:286

Q4H3D5              	100.00%		Q1I181              	100.00%
Bootstrap support for Q4H3D5 as seed ortholog is 100%.
Bootstrap support for Q1I181 as seed ortholog is 100%.

Group of orthologs #1216. Best score 504 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 S.scrofa:132

F6PJL4              	100.00%		F1RPY5              	100.00%
Bootstrap support for F6PJL4 as seed ortholog is 100%.
Bootstrap support for F1RPY5 as seed ortholog is 99%.

Group of orthologs #1217. Best score 504 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 S.scrofa:504

F6UR25              	100.00%		I3L7K6              	100.00%
Bootstrap support for F6UR25 as seed ortholog is 57%.
Alternative seed ortholog is F6ZFS8 (12 bits away from this cluster)
Bootstrap support for I3L7K6 as seed ortholog is 100%.

Group of orthologs #1218. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 S.scrofa:503

F6Z5P6              	100.00%		P80041              	100.00%
F6ZTZ7              	57.59%		I3L7F0              	90.52%
Bootstrap support for F6Z5P6 as seed ortholog is 100%.
Bootstrap support for P80041 as seed ortholog is 100%.

Group of orthologs #1219. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 S.scrofa:503

F7BJC2              	100.00%		F1RY91              	100.00%
                    	       		I3L939              	56.96%
Bootstrap support for F7BJC2 as seed ortholog is 100%.
Bootstrap support for F1RY91 as seed ortholog is 100%.

Group of orthologs #1220. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 S.scrofa:391

H2XRD9              	100.00%		F1SH24              	100.00%
                    	       		F1RHU3              	10.14%
Bootstrap support for H2XRD9 as seed ortholog is 100%.
Bootstrap support for F1SH24 as seed ortholog is 100%.

Group of orthologs #1221. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 S.scrofa:503

F6V6S0              	100.00%		F1SCG2              	100.00%
Bootstrap support for F6V6S0 as seed ortholog is 100%.
Bootstrap support for F1SCG2 as seed ortholog is 100%.

Group of orthologs #1222. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 S.scrofa:503

F6WJV4              	100.00%		F1SHI5              	100.00%
Bootstrap support for F6WJV4 as seed ortholog is 100%.
Bootstrap support for F1SHI5 as seed ortholog is 100%.

Group of orthologs #1223. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 S.scrofa:503

F6QS75              	100.00%		I3LA74              	100.00%
Bootstrap support for F6QS75 as seed ortholog is 100%.
Bootstrap support for I3LA74 as seed ortholog is 100%.

Group of orthologs #1224. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 S.scrofa:503

F6VN53              	100.00%		I3LAX1              	100.00%
Bootstrap support for F6VN53 as seed ortholog is 100%.
Bootstrap support for I3LAX1 as seed ortholog is 100%.

Group of orthologs #1225. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 S.scrofa:104

F6RGG4              	100.00%		P29797              	100.00%
Bootstrap support for F6RGG4 as seed ortholog is 100%.
Bootstrap support for P29797 as seed ortholog is 99%.

Group of orthologs #1226. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 S.scrofa:503

F7BCV4              	100.00%		I3LNR4              	100.00%
Bootstrap support for F7BCV4 as seed ortholog is 100%.
Bootstrap support for I3LNR4 as seed ortholog is 100%.

Group of orthologs #1227. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 S.scrofa:502

H2XWZ0              	100.00%		I3LHB2              	100.00%
                    	       		I3LSJ9              	46.93%
Bootstrap support for H2XWZ0 as seed ortholog is 100%.
Bootstrap support for I3LHB2 as seed ortholog is 100%.

Group of orthologs #1228. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 S.scrofa:502

F6RA65              	100.00%		F1RNT7              	100.00%
Bootstrap support for F6RA65 as seed ortholog is 100%.
Bootstrap support for F1RNT7 as seed ortholog is 100%.

Group of orthologs #1229. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 S.scrofa:52

F7A5J2              	100.00%		I3L5T3              	100.00%
Bootstrap support for F7A5J2 as seed ortholog is 100%.
Bootstrap support for I3L5T3 as seed ortholog is 89%.

Group of orthologs #1230. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:501 S.scrofa:501

F6VN41              	100.00%		F1RH91              	100.00%
Bootstrap support for F6VN41 as seed ortholog is 100%.
Bootstrap support for F1RH91 as seed ortholog is 100%.

Group of orthologs #1231. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 S.scrofa:106

F6YD09              	100.00%		F1RW97              	100.00%
Bootstrap support for F6YD09 as seed ortholog is 100%.
Bootstrap support for F1RW97 as seed ortholog is 98%.

Group of orthologs #1232. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:501 S.scrofa:456

H2Y1I4              	100.00%		F1SJ04              	100.00%
Bootstrap support for H2Y1I4 as seed ortholog is 100%.
Bootstrap support for F1SJ04 as seed ortholog is 100%.

Group of orthologs #1233. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 S.scrofa:89

F6YG27              	100.00%		D7RA31              	100.00%
Bootstrap support for F6YG27 as seed ortholog is 100%.
Bootstrap support for D7RA31 as seed ortholog is 98%.

Group of orthologs #1234. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 S.scrofa:500

F6RKR7              	100.00%		F1SHX9              	100.00%
Bootstrap support for F6RKR7 as seed ortholog is 100%.
Bootstrap support for F1SHX9 as seed ortholog is 100%.

Group of orthologs #1235. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 S.scrofa:390

F6PH58              	100.00%		F1SU27              	100.00%
Bootstrap support for F6PH58 as seed ortholog is 100%.
Bootstrap support for F1SU27 as seed ortholog is 100%.

Group of orthologs #1236. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 S.scrofa:86

F6Q0W6              	100.00%		K7GL21              	100.00%
Bootstrap support for F6Q0W6 as seed ortholog is 100%.
Bootstrap support for K7GL21 as seed ortholog is 95%.

Group of orthologs #1237. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 S.scrofa:500

F7AJP1              	100.00%		P00503              	100.00%
Bootstrap support for F7AJP1 as seed ortholog is 100%.
Bootstrap support for P00503 as seed ortholog is 100%.

Group of orthologs #1238. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 S.scrofa:500

F7AZV0              	100.00%		Q9N0F1              	100.00%
Bootstrap support for F7AZV0 as seed ortholog is 100%.
Bootstrap support for Q9N0F1 as seed ortholog is 100%.

Group of orthologs #1239. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 S.scrofa:499

F6S7F2              	100.00%		F1S6T0              	100.00%
Bootstrap support for F6S7F2 as seed ortholog is 100%.
Bootstrap support for F1S6T0 as seed ortholog is 100%.

Group of orthologs #1240. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 S.scrofa:499

H2Y2X7              	100.00%		F1SPN2              	100.00%
Bootstrap support for H2Y2X7 as seed ortholog is 100%.
Bootstrap support for F1SPN2 as seed ortholog is 100%.

Group of orthologs #1241. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:499

Q1RQ07              	100.00%		I3LLQ4              	100.00%
Bootstrap support for Q1RQ07 as seed ortholog is 99%.
Bootstrap support for I3LLQ4 as seed ortholog is 100%.

Group of orthologs #1242. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 S.scrofa:157

F6PP44              	100.00%		F1RJ25              	100.00%
Bootstrap support for F6PP44 as seed ortholog is 100%.
Bootstrap support for F1RJ25 as seed ortholog is 100%.

Group of orthologs #1243. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 S.scrofa:241

F6UAS2              	100.00%		F1RV22              	100.00%
Bootstrap support for F6UAS2 as seed ortholog is 100%.
Bootstrap support for F1RV22 as seed ortholog is 100%.

Group of orthologs #1244. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 S.scrofa:498

F6TTJ7              	100.00%		F1SAI5              	100.00%
Bootstrap support for F6TTJ7 as seed ortholog is 100%.
Bootstrap support for F1SAI5 as seed ortholog is 100%.

Group of orthologs #1245. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 S.scrofa:498

F6WBK6              	100.00%		F1SI91              	100.00%
Bootstrap support for F6WBK6 as seed ortholog is 100%.
Bootstrap support for F1SI91 as seed ortholog is 100%.

Group of orthologs #1246. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 S.scrofa:453

F6SSU2              	100.00%		I3L944              	100.00%
Bootstrap support for F6SSU2 as seed ortholog is 100%.
Bootstrap support for I3L944 as seed ortholog is 100%.

Group of orthologs #1247. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 S.scrofa:411

F7ACJ3              	100.00%		I3LE86              	100.00%
Bootstrap support for F7ACJ3 as seed ortholog is 100%.
Bootstrap support for I3LE86 as seed ortholog is 100%.

Group of orthologs #1248. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 S.scrofa:497

F6T2S3              	100.00%		F1S8V2              	100.00%
Bootstrap support for F6T2S3 as seed ortholog is 100%.
Bootstrap support for F1S8V2 as seed ortholog is 100%.

Group of orthologs #1249. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 S.scrofa:327

F6XJF3              	100.00%		F1SRD2              	100.00%
Bootstrap support for F6XJF3 as seed ortholog is 100%.
Bootstrap support for F1SRD2 as seed ortholog is 100%.

Group of orthologs #1250. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 S.scrofa:233

F6Z8X9              	100.00%		D3K5N0              	100.00%
                    	       		F1SI00              	85.24%
Bootstrap support for F6Z8X9 as seed ortholog is 100%.
Bootstrap support for D3K5N0 as seed ortholog is 100%.

Group of orthologs #1251. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 S.scrofa:496

F6YVU0              	100.00%		F1RR06              	100.00%
                    	       		I3LTH3              	39.62%
Bootstrap support for F6YVU0 as seed ortholog is 100%.
Bootstrap support for F1RR06 as seed ortholog is 100%.

Group of orthologs #1252. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 S.scrofa:496

F7BDF6              	100.00%		F1S0Q6              	100.00%
                    	       		I3L6D1              	6.18%
Bootstrap support for F7BDF6 as seed ortholog is 100%.
Bootstrap support for F1S0Q6 as seed ortholog is 100%.

Group of orthologs #1253. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 S.scrofa:249

Q4H2U9              	100.00%		A5D9P3              	100.00%
                    	       		Q0GFF6              	13.91%
Bootstrap support for Q4H2U9 as seed ortholog is 100%.
Bootstrap support for A5D9P3 as seed ortholog is 100%.

Group of orthologs #1254. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 S.scrofa:496

F6RIY5              	100.00%		F1RKB2              	100.00%
Bootstrap support for F6RIY5 as seed ortholog is 100%.
Bootstrap support for F1RKB2 as seed ortholog is 100%.

Group of orthologs #1255. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 S.scrofa:100

F7BJA7              	100.00%		F1RK23              	100.00%
Bootstrap support for F7BJA7 as seed ortholog is 100%.
Bootstrap support for F1RK23 as seed ortholog is 99%.

Group of orthologs #1256. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 S.scrofa:496

F6SDZ0              	100.00%		F1SHS4              	100.00%
Bootstrap support for F6SDZ0 as seed ortholog is 100%.
Bootstrap support for F1SHS4 as seed ortholog is 100%.

Group of orthologs #1257. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 S.scrofa:115

H2Y1T7              	100.00%		F1RNW8              	100.00%
Bootstrap support for H2Y1T7 as seed ortholog is 86%.
Bootstrap support for F1RNW8 as seed ortholog is 99%.

Group of orthologs #1258. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 S.scrofa:198

F6UAZ6              	100.00%		F1RG50              	100.00%
Bootstrap support for F6UAZ6 as seed ortholog is 100%.
Bootstrap support for F1RG50 as seed ortholog is 100%.

Group of orthologs #1259. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 S.scrofa:495

F6YLW1              	100.00%		F1S5C5              	100.00%
Bootstrap support for F6YLW1 as seed ortholog is 100%.
Bootstrap support for F1S5C5 as seed ortholog is 100%.

Group of orthologs #1260. Best score 494 bits
Score difference with first non-orthologous sequence - C.intestinalis:494 S.scrofa:395

F6S043              	100.00%		F1S5K2              	100.00%
Bootstrap support for F6S043 as seed ortholog is 100%.
Bootstrap support for F1S5K2 as seed ortholog is 100%.

Group of orthologs #1261. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:286

F6VES6              	100.00%		F1S2X6              	100.00%
F6W5K3              	11.62%		I3LIC4              	9.08%
Bootstrap support for F6VES6 as seed ortholog is 96%.
Bootstrap support for F1S2X6 as seed ortholog is 100%.

Group of orthologs #1262. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 S.scrofa:493

F6RA92              	100.00%		F1S3K9              	100.00%
                    	       		Q0MS45              	13.49%
Bootstrap support for F6RA92 as seed ortholog is 100%.
Bootstrap support for F1S3K9 as seed ortholog is 100%.

Group of orthologs #1263. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 S.scrofa:361

F6XFJ7              	100.00%		F1SMN9              	100.00%
                    	       		I3LVJ1              	6.65%
Bootstrap support for F6XFJ7 as seed ortholog is 100%.
Bootstrap support for F1SMN9 as seed ortholog is 100%.

Group of orthologs #1264. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 S.scrofa:493

F6YGD1              	100.00%		F1RW08              	100.00%
Bootstrap support for F6YGD1 as seed ortholog is 100%.
Bootstrap support for F1RW08 as seed ortholog is 100%.

Group of orthologs #1265. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 S.scrofa:493

F6ZGK8              	100.00%		F1RUK2              	100.00%
Bootstrap support for F6ZGK8 as seed ortholog is 100%.
Bootstrap support for F1RUK2 as seed ortholog is 100%.

Group of orthologs #1266. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.scrofa:92

F6WYA1              	100.00%		F1SJ27              	100.00%
Bootstrap support for F6WYA1 as seed ortholog is 100%.
Bootstrap support for F1SJ27 as seed ortholog is 98%.

Group of orthologs #1267. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 S.scrofa:63

F6ZM65              	100.00%		F1SIZ2              	100.00%
Bootstrap support for F6ZM65 as seed ortholog is 100%.
Bootstrap support for F1SIZ2 as seed ortholog is 98%.

Group of orthologs #1268. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.scrofa:492

F7B4M1              	100.00%		F1RFQ3              	100.00%
                    	       		I3LRD8              	37.60%
                    	       		F1STR5              	7.99%
Bootstrap support for F7B4M1 as seed ortholog is 100%.
Bootstrap support for F1RFQ3 as seed ortholog is 100%.

Group of orthologs #1269. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 S.scrofa:314

F6PP23              	100.00%		F1RUG2              	100.00%
                    	       		F1RVS7              	6.49%
Bootstrap support for F6PP23 as seed ortholog is 100%.
Bootstrap support for F1RUG2 as seed ortholog is 100%.

Group of orthologs #1270. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 S.scrofa:492

F6RXZ8              	100.00%		F1SV26              	100.00%
                    	       		F1S0C8              	34.29%
Bootstrap support for F6RXZ8 as seed ortholog is 100%.
Bootstrap support for F1SV26 as seed ortholog is 100%.

Group of orthologs #1271. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 S.scrofa:306

Q1RLF0              	100.00%		F1RNA8              	100.00%
                    	       		I3LBF4              	53.41%
Bootstrap support for Q1RLF0 as seed ortholog is 100%.
Bootstrap support for F1RNA8 as seed ortholog is 100%.

Group of orthologs #1272. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 S.scrofa:305

H2XS38              	100.00%		F1RQ74              	100.00%
                    	       		I3LBU6              	9.52%
Bootstrap support for H2XS38 as seed ortholog is 100%.
Bootstrap support for F1RQ74 as seed ortholog is 100%.

Group of orthologs #1273. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 S.scrofa:491

F6QI83              	100.00%		F1RKS3              	100.00%
Bootstrap support for F6QI83 as seed ortholog is 100%.
Bootstrap support for F1RKS3 as seed ortholog is 100%.

Group of orthologs #1274. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 S.scrofa:235

F6Z726              	100.00%		F1RUR7              	100.00%
Bootstrap support for F6Z726 as seed ortholog is 100%.
Bootstrap support for F1RUR7 as seed ortholog is 99%.

Group of orthologs #1275. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 S.scrofa:345

H2XUE6              	100.00%		F1SSR2              	100.00%
Bootstrap support for H2XUE6 as seed ortholog is 100%.
Bootstrap support for F1SSR2 as seed ortholog is 100%.

Group of orthologs #1276. Best score 490 bits
Score difference with first non-orthologous sequence - C.intestinalis:490 S.scrofa:490

Q1RLG9              	100.00%		F1RN87              	100.00%
                    	       		I3LIY8              	33.40%
Bootstrap support for Q1RLG9 as seed ortholog is 100%.
Bootstrap support for F1RN87 as seed ortholog is 100%.

Group of orthologs #1277. Best score 490 bits
Score difference with first non-orthologous sequence - C.intestinalis:490 S.scrofa:490

F6UDJ0              	100.00%		F1S843              	100.00%
Bootstrap support for F6UDJ0 as seed ortholog is 100%.
Bootstrap support for F1S843 as seed ortholog is 100%.

Group of orthologs #1278. Best score 490 bits
Score difference with first non-orthologous sequence - C.intestinalis:490 S.scrofa:490

F6SSP8              	100.00%		F1SI15              	100.00%
Bootstrap support for F6SSP8 as seed ortholog is 100%.
Bootstrap support for F1SI15 as seed ortholog is 100%.

Group of orthologs #1279. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 S.scrofa:488

H2XMC6              	100.00%		F1RZG8              	100.00%
Bootstrap support for H2XMC6 as seed ortholog is 100%.
Bootstrap support for F1RZG8 as seed ortholog is 100%.

Group of orthologs #1280. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 S.scrofa:488

F7B314              	100.00%		F1SL39              	100.00%
Bootstrap support for F7B314 as seed ortholog is 100%.
Bootstrap support for F1SL39 as seed ortholog is 100%.

Group of orthologs #1281. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 S.scrofa:488

H2XLC1              	100.00%		F1SR76              	100.00%
Bootstrap support for H2XLC1 as seed ortholog is 100%.
Bootstrap support for F1SR76 as seed ortholog is 100%.

Group of orthologs #1282. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 S.scrofa:175

F7B8G2              	100.00%		I3LKI4              	100.00%
Bootstrap support for F7B8G2 as seed ortholog is 100%.
Bootstrap support for I3LKI4 as seed ortholog is 99%.

Group of orthologs #1283. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:417 S.scrofa:396

F6R683              	100.00%		F1SDG0              	100.00%
Bootstrap support for F6R683 as seed ortholog is 100%.
Bootstrap support for F1SDG0 as seed ortholog is 100%.

Group of orthologs #1284. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 S.scrofa:264

F7A606              	100.00%		I3LNG8              	100.00%
Bootstrap support for F7A606 as seed ortholog is 100%.
Bootstrap support for I3LNG8 as seed ortholog is 100%.

Group of orthologs #1285. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 S.scrofa:486

F6QTS6              	100.00%		F1SN58              	100.00%
                    	       		F1SN59              	28.97%
Bootstrap support for F6QTS6 as seed ortholog is 100%.
Bootstrap support for F1SN58 as seed ortholog is 100%.

Group of orthologs #1286. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 S.scrofa:371

F6R8L5              	100.00%		F1SBJ1              	100.00%
Bootstrap support for F6R8L5 as seed ortholog is 100%.
Bootstrap support for F1SBJ1 as seed ortholog is 100%.

Group of orthologs #1287. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 S.scrofa:486

F6RU68              	100.00%		F1SBH7              	100.00%
Bootstrap support for F6RU68 as seed ortholog is 100%.
Bootstrap support for F1SBH7 as seed ortholog is 100%.

Group of orthologs #1288. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 S.scrofa:486

H2XTF7              	100.00%		F1RZP6              	100.00%
Bootstrap support for H2XTF7 as seed ortholog is 100%.
Bootstrap support for F1RZP6 as seed ortholog is 100%.

Group of orthologs #1289. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 S.scrofa:313

F6PJL7              	100.00%		B8XSJ7              	100.00%
                    	       		F1SEZ4              	13.59%
Bootstrap support for F6PJL7 as seed ortholog is 100%.
Bootstrap support for B8XSJ7 as seed ortholog is 100%.

Group of orthologs #1290. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 S.scrofa:174

F6UY72              	100.00%		F1RM37              	100.00%
                    	       		F1STH9              	6.96%
Bootstrap support for F6UY72 as seed ortholog is 100%.
Bootstrap support for F1RM37 as seed ortholog is 100%.

Group of orthologs #1291. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 S.scrofa:232

F7AZI8              	100.00%		C9K505              	100.00%
Bootstrap support for F7AZI8 as seed ortholog is 100%.
Bootstrap support for C9K505 as seed ortholog is 100%.

Group of orthologs #1292. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 S.scrofa:485

F6WRR9              	100.00%		F1SNE3              	100.00%
Bootstrap support for F6WRR9 as seed ortholog is 100%.
Bootstrap support for F1SNE3 as seed ortholog is 100%.

Group of orthologs #1293. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 S.scrofa:485

F6YP95              	100.00%		F1SNG7              	100.00%
Bootstrap support for F6YP95 as seed ortholog is 100%.
Bootstrap support for F1SNG7 as seed ortholog is 100%.

Group of orthologs #1294. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 S.scrofa:485

F6ZTT3              	100.00%		F1SMQ3              	100.00%
Bootstrap support for F6ZTT3 as seed ortholog is 100%.
Bootstrap support for F1SMQ3 as seed ortholog is 100%.

Group of orthologs #1295. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 S.scrofa:237

F6ZSR8              	100.00%		I3LKS0              	100.00%
Bootstrap support for F6ZSR8 as seed ortholog is 100%.
Bootstrap support for I3LKS0 as seed ortholog is 100%.

Group of orthologs #1296. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 S.scrofa:377

F6TLU2              	100.00%		F1RL69              	100.00%
                    	       		F1RL71              	52.60%
                    	       		F1S147              	16.36%
Bootstrap support for F6TLU2 as seed ortholog is 73%.
Alternative seed ortholog is F6TZG1 (28 bits away from this cluster)
Bootstrap support for F1RL69 as seed ortholog is 100%.

Group of orthologs #1297. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 S.scrofa:410

F6YGK4              	100.00%		I3L9X2              	100.00%
                    	       		F1RMH0              	49.31%
                    	       		F1SFK0              	30.57%
Bootstrap support for F6YGK4 as seed ortholog is 100%.
Bootstrap support for I3L9X2 as seed ortholog is 100%.

Group of orthologs #1298. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 S.scrofa:484

F6XQV0              	100.00%		Q865F1              	100.00%
                    	       		I3LMN6              	39.35%
Bootstrap support for F6XQV0 as seed ortholog is 100%.
Bootstrap support for Q865F1 as seed ortholog is 100%.

Group of orthologs #1299. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.scrofa:390

F6TX56              	100.00%		F1RFI1              	100.00%
Bootstrap support for F6TX56 as seed ortholog is 100%.
Bootstrap support for F1RFI1 as seed ortholog is 100%.

Group of orthologs #1300. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 S.scrofa:484

F6SJ40              	100.00%		F1RKX7              	100.00%
Bootstrap support for F6SJ40 as seed ortholog is 100%.
Bootstrap support for F1RKX7 as seed ortholog is 100%.

Group of orthologs #1301. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 S.scrofa:419

F6ZUD0              	100.00%		F2Z5F3              	100.00%
Bootstrap support for F6ZUD0 as seed ortholog is 100%.
Bootstrap support for F2Z5F3 as seed ortholog is 100%.

Group of orthologs #1302. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 S.scrofa:246

F6TLX8              	100.00%		I3LPI5              	100.00%
Bootstrap support for F6TLX8 as seed ortholog is 100%.
Bootstrap support for I3LPI5 as seed ortholog is 99%.

Group of orthologs #1303. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 S.scrofa:484

H2XSD2              	100.00%		F1SQG4              	100.00%
Bootstrap support for H2XSD2 as seed ortholog is 100%.
Bootstrap support for F1SQG4 as seed ortholog is 100%.

Group of orthologs #1304. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 S.scrofa:484

F7AVN1              	100.00%		I3LGA8              	100.00%
Bootstrap support for F7AVN1 as seed ortholog is 100%.
Bootstrap support for I3LGA8 as seed ortholog is 100%.

Group of orthologs #1305. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 S.scrofa:483

F7A1T4              	100.00%		I3LPG3              	100.00%
                    	       		F1SNB1              	83.28%
Bootstrap support for F7A1T4 as seed ortholog is 100%.
Bootstrap support for I3LPG3 as seed ortholog is 100%.

Group of orthologs #1306. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 S.scrofa:382

F6TJN1              	100.00%		F1S412              	100.00%
Bootstrap support for F6TJN1 as seed ortholog is 100%.
Bootstrap support for F1S412 as seed ortholog is 100%.

Group of orthologs #1307. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 S.scrofa:483

H2XY03              	100.00%		A5GFY8              	100.00%
Bootstrap support for H2XY03 as seed ortholog is 100%.
Bootstrap support for A5GFY8 as seed ortholog is 100%.

Group of orthologs #1308. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 S.scrofa:483

F6UTV1              	100.00%		O19069              	100.00%
Bootstrap support for F6UTV1 as seed ortholog is 100%.
Bootstrap support for O19069 as seed ortholog is 100%.

Group of orthologs #1309. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 S.scrofa:482

F7AX37              	100.00%		I3LL23              	100.00%
                    	       		I3LKP1              	56.75%
                    	       		F1SDV4              	17.82%
Bootstrap support for F7AX37 as seed ortholog is 100%.
Bootstrap support for I3LL23 as seed ortholog is 100%.

Group of orthologs #1310. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 S.scrofa:482

F6SLD6              	100.00%		F1SUJ0              	100.00%
Bootstrap support for F6SLD6 as seed ortholog is 100%.
Bootstrap support for F1SUJ0 as seed ortholog is 100%.

Group of orthologs #1311. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 S.scrofa:481

F6Q0X6              	100.00%		F1RS16              	100.00%
                    	       		I3LH08              	65.51%
Bootstrap support for F6Q0X6 as seed ortholog is 100%.
Bootstrap support for F1RS16 as seed ortholog is 100%.

Group of orthologs #1312. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 S.scrofa:481

F6TEA0              	100.00%		F1SB18              	100.00%
                    	       		F1RWP0              	23.46%
Bootstrap support for F6TEA0 as seed ortholog is 100%.
Bootstrap support for F1SB18 as seed ortholog is 100%.

Group of orthologs #1313. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.scrofa:242

F6ZQY6              	100.00%		F1S8F9              	100.00%
Bootstrap support for F6ZQY6 as seed ortholog is 99%.
Bootstrap support for F1S8F9 as seed ortholog is 99%.

Group of orthologs #1314. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 S.scrofa:480

F6THY1              	100.00%		I3LPL3              	100.00%
                    	       		F1SIY2              	92.29%
                    	       		F1SSM5              	65.67%
                    	       		K7GS04              	35.07%
Bootstrap support for F6THY1 as seed ortholog is 100%.
Bootstrap support for I3LPL3 as seed ortholog is 100%.

Group of orthologs #1315. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 S.scrofa:480

F6XMP8              	100.00%		I3LS00              	100.00%
                    	       		F1SV06              	60.10%
                    	       		F1SDR6              	43.37%
Bootstrap support for F6XMP8 as seed ortholog is 100%.
Bootstrap support for I3LS00 as seed ortholog is 100%.

Group of orthologs #1316. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 S.scrofa:293

F6PYE4              	100.00%		F1S067              	100.00%
                    	       		F1SBZ4              	10.29%
Bootstrap support for F6PYE4 as seed ortholog is 100%.
Bootstrap support for F1S067 as seed ortholog is 100%.

Group of orthologs #1317. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 S.scrofa:261

F7ALL8              	100.00%		F1SSU8              	100.00%
                    	       		I3LNT3              	23.32%
Bootstrap support for F7ALL8 as seed ortholog is 99%.
Bootstrap support for F1SSU8 as seed ortholog is 100%.

Group of orthologs #1318. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 S.scrofa:216

F6YNE2              	100.00%		K7GNG1              	100.00%
Bootstrap support for F6YNE2 as seed ortholog is 100%.
Bootstrap support for K7GNG1 as seed ortholog is 100%.

Group of orthologs #1319. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 S.scrofa:124

F6TLX0              	100.00%		F1RSU5              	100.00%
                    	       		F1RWF1              	27.16%
                    	       		F1S5Q6              	23.45%
Bootstrap support for F6TLX0 as seed ortholog is 100%.
Bootstrap support for F1RSU5 as seed ortholog is 96%.

Group of orthologs #1320. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 S.scrofa:479

F6U144              	100.00%		F1RUE2              	100.00%
Bootstrap support for F6U144 as seed ortholog is 100%.
Bootstrap support for F1RUE2 as seed ortholog is 100%.

Group of orthologs #1321. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 S.scrofa:479

F6R213              	100.00%		F1SQC5              	100.00%
Bootstrap support for F6R213 as seed ortholog is 100%.
Bootstrap support for F1SQC5 as seed ortholog is 100%.

Group of orthologs #1322. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 S.scrofa:289

F7B0U3              	100.00%		F1SFH0              	100.00%
Bootstrap support for F7B0U3 as seed ortholog is 100%.
Bootstrap support for F1SFH0 as seed ortholog is 100%.

Group of orthologs #1323. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 S.scrofa:412

F6RZM2              	100.00%		I3LIH4              	100.00%
Bootstrap support for F6RZM2 as seed ortholog is 100%.
Bootstrap support for I3LIH4 as seed ortholog is 100%.

Group of orthologs #1324. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 S.scrofa:478

F6TBF9              	100.00%		I3LJQ7              	100.00%
                    	       		I3LQS3              	51.49%
Bootstrap support for F6TBF9 as seed ortholog is 100%.
Bootstrap support for I3LJQ7 as seed ortholog is 100%.

Group of orthologs #1325. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 S.scrofa:132

F6UD40              	100.00%		I3LU14              	100.00%
                    	       		F1STN2              	8.93%
Bootstrap support for F6UD40 as seed ortholog is 100%.
Bootstrap support for I3LU14 as seed ortholog is 99%.

Group of orthologs #1326. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 S.scrofa:478

F6XR36              	100.00%		K7GPY0              	100.00%
                    	       		I3LNQ4              	41.85%
Bootstrap support for F6XR36 as seed ortholog is 100%.
Bootstrap support for K7GPY0 as seed ortholog is 100%.

Group of orthologs #1327. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 S.scrofa:478

F6QAT1              	100.00%		I3LUU8              	100.00%
Bootstrap support for F6QAT1 as seed ortholog is 100%.
Bootstrap support for I3LUU8 as seed ortholog is 100%.

Group of orthologs #1328. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 S.scrofa:478

H2Y2G1              	100.00%		F2Z5H7              	100.00%
Bootstrap support for H2Y2G1 as seed ortholog is 100%.
Bootstrap support for F2Z5H7 as seed ortholog is 100%.

Group of orthologs #1329. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 S.scrofa:478

H2XJY8              	100.00%		Q70KH2              	100.00%
Bootstrap support for H2XJY8 as seed ortholog is 100%.
Bootstrap support for Q70KH2 as seed ortholog is 100%.

Group of orthologs #1330. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 S.scrofa:478

H2XXZ6              	100.00%		K7GQD8              	100.00%
Bootstrap support for H2XXZ6 as seed ortholog is 100%.
Bootstrap support for K7GQD8 as seed ortholog is 100%.

Group of orthologs #1331. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 S.scrofa:311

F6WQ08              	100.00%		B7U6F1              	100.00%
Bootstrap support for F6WQ08 as seed ortholog is 100%.
Bootstrap support for B7U6F1 as seed ortholog is 100%.

Group of orthologs #1332. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 S.scrofa:374

F6ZFW2              	100.00%		F1S3D1              	100.00%
Bootstrap support for F6ZFW2 as seed ortholog is 100%.
Bootstrap support for F1S3D1 as seed ortholog is 100%.

Group of orthologs #1333. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 S.scrofa:477

H2XZV8              	100.00%		F1S2I2              	100.00%
Bootstrap support for H2XZV8 as seed ortholog is 100%.
Bootstrap support for F1S2I2 as seed ortholog is 100%.

Group of orthologs #1334. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 S.scrofa:349

H2XKP7              	100.00%		B6V6V4              	100.00%
Bootstrap support for H2XKP7 as seed ortholog is 100%.
Bootstrap support for B6V6V4 as seed ortholog is 100%.

Group of orthologs #1335. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 S.scrofa:476

F7A8L8              	100.00%		F1SMK2              	100.00%
Bootstrap support for F7A8L8 as seed ortholog is 100%.
Bootstrap support for F1SMK2 as seed ortholog is 100%.

Group of orthologs #1336. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 S.scrofa:476

H2XTB6              	100.00%		I3L7J1              	100.00%
Bootstrap support for H2XTB6 as seed ortholog is 100%.
Bootstrap support for I3L7J1 as seed ortholog is 100%.

Group of orthologs #1337. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 S.scrofa:290

F6SR69              	100.00%		F1SH99              	100.00%
                    	       		I3L578              	6.23%
Bootstrap support for F6SR69 as seed ortholog is 100%.
Bootstrap support for F1SH99 as seed ortholog is 100%.

Group of orthologs #1338. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 S.scrofa:168

F6PTZ3              	100.00%		K7GRB4              	100.00%
F6PUF3              	26.60%		
Bootstrap support for F6PTZ3 as seed ortholog is 99%.
Bootstrap support for K7GRB4 as seed ortholog is 99%.

Group of orthologs #1339. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 S.scrofa:366

F6QDG1              	100.00%		F2Z5U3              	100.00%
Bootstrap support for F6QDG1 as seed ortholog is 100%.
Bootstrap support for F2Z5U3 as seed ortholog is 100%.

Group of orthologs #1340. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 S.scrofa:474

F6ZF56              	100.00%		F1RYT5              	100.00%
                    	       		F1SIW3              	70.95%
Bootstrap support for F6ZF56 as seed ortholog is 100%.
Bootstrap support for F1RYT5 as seed ortholog is 100%.

Group of orthologs #1341. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.scrofa:238

F6YLI3              	100.00%		F1SUF2              	100.00%
                    	       		Q1W674              	68.65%
                    	       		F1SUF3              	64.17%
                    	       		F1S3B7              	36.90%
Bootstrap support for F6YLI3 as seed ortholog is 96%.
Bootstrap support for F1SUF2 as seed ortholog is 100%.

Group of orthologs #1342. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 S.scrofa:220

F6R4F4              	100.00%		F1SGD7              	100.00%
                    	       		F1RYA4              	9.51%
Bootstrap support for F6R4F4 as seed ortholog is 100%.
Bootstrap support for F1SGD7 as seed ortholog is 100%.

Group of orthologs #1343. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 S.scrofa:310

F6S0X0              	100.00%		F1S0U0              	100.00%
Bootstrap support for F6S0X0 as seed ortholog is 100%.
Bootstrap support for F1S0U0 as seed ortholog is 100%.

Group of orthologs #1344. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 S.scrofa:473

F6W318              	100.00%		F1RMC7              	100.00%
Bootstrap support for F6W318 as seed ortholog is 100%.
Bootstrap support for F1RMC7 as seed ortholog is 100%.

Group of orthologs #1345. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.scrofa:473

F6UGA6              	100.00%		F1S520              	100.00%
Bootstrap support for F6UGA6 as seed ortholog is 98%.
Bootstrap support for F1S520 as seed ortholog is 100%.

Group of orthologs #1346. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 S.scrofa:473

F6ZYJ2              	100.00%		F1S226              	100.00%
Bootstrap support for F6ZYJ2 as seed ortholog is 100%.
Bootstrap support for F1S226 as seed ortholog is 100%.

Group of orthologs #1347. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 S.scrofa:473

F6VNW9              	100.00%		I3LIM8              	100.00%
Bootstrap support for F6VNW9 as seed ortholog is 100%.
Bootstrap support for I3LIM8 as seed ortholog is 100%.

Group of orthologs #1348. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 S.scrofa:472

F6W510              	100.00%		F1RVX3              	100.00%
Bootstrap support for F6W510 as seed ortholog is 100%.
Bootstrap support for F1RVX3 as seed ortholog is 100%.

Group of orthologs #1349. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 S.scrofa:472

F6RN60              	100.00%		F2Z5J4              	100.00%
Bootstrap support for F6RN60 as seed ortholog is 100%.
Bootstrap support for F2Z5J4 as seed ortholog is 100%.

Group of orthologs #1350. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.scrofa:141

F7ARV5              	100.00%		Q197W4              	100.00%
Bootstrap support for F7ARV5 as seed ortholog is 100%.
Bootstrap support for Q197W4 as seed ortholog is 100%.

Group of orthologs #1351. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 S.scrofa:471

F6U8A8              	100.00%		F1SAW7              	100.00%
                    	       		F1RJY3              	44.94%
Bootstrap support for F6U8A8 as seed ortholog is 100%.
Bootstrap support for F1SAW7 as seed ortholog is 100%.

Group of orthologs #1352. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.scrofa:384

F6TS86              	100.00%		F1SBY8              	100.00%
Bootstrap support for F6TS86 as seed ortholog is 99%.
Bootstrap support for F1SBY8 as seed ortholog is 100%.

Group of orthologs #1353. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 S.scrofa:371

F6VAX6              	100.00%		F1SU87              	100.00%
Bootstrap support for F6VAX6 as seed ortholog is 100%.
Bootstrap support for F1SU87 as seed ortholog is 100%.

Group of orthologs #1354. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 S.scrofa:471

F7BH52              	100.00%		F1SMB2              	100.00%
Bootstrap support for F7BH52 as seed ortholog is 100%.
Bootstrap support for F1SMB2 as seed ortholog is 100%.

Group of orthologs #1355. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 S.scrofa:426

F6ZIT4              	100.00%		I3LA44              	100.00%
Bootstrap support for F6ZIT4 as seed ortholog is 100%.
Bootstrap support for I3LA44 as seed ortholog is 100%.

Group of orthologs #1356. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 S.scrofa:470

F6X5M5              	100.00%		F1S8C7              	100.00%
                    	       		F1SCX8              	22.40%
                    	       		F1RR90              	21.83%
Bootstrap support for F6X5M5 as seed ortholog is 100%.
Bootstrap support for F1S8C7 as seed ortholog is 100%.

Group of orthologs #1357. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 S.scrofa:470

F6SZY0              	100.00%		F1SD98              	100.00%
                    	       		I3LQ55              	10.65%
Bootstrap support for F6SZY0 as seed ortholog is 100%.
Bootstrap support for F1SD98 as seed ortholog is 100%.

Group of orthologs #1358. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 S.scrofa:199

F6Z2I4              	100.00%		I3LE64              	100.00%
                    	       		F1SG43              	25.49%
Bootstrap support for F6Z2I4 as seed ortholog is 100%.
Bootstrap support for I3LE64 as seed ortholog is 100%.

Group of orthologs #1359. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 S.scrofa:148

H2XQC1              	100.00%		I3LS12              	100.00%
                    	       		F1S0A3              	21.94%
Bootstrap support for H2XQC1 as seed ortholog is 100%.
Bootstrap support for I3LS12 as seed ortholog is 99%.

Group of orthologs #1360. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 S.scrofa:470

F6TFJ1              	100.00%		F1RGE2              	100.00%
Bootstrap support for F6TFJ1 as seed ortholog is 100%.
Bootstrap support for F1RGE2 as seed ortholog is 100%.

Group of orthologs #1361. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 S.scrofa:470

F6PWP3              	100.00%		F1SLS9              	100.00%
Bootstrap support for F6PWP3 as seed ortholog is 100%.
Bootstrap support for F1SLS9 as seed ortholog is 100%.

Group of orthologs #1362. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 S.scrofa:334

F6RD19              	100.00%		F1SQT9              	100.00%
Bootstrap support for F6RD19 as seed ortholog is 100%.
Bootstrap support for F1SQT9 as seed ortholog is 100%.

Group of orthologs #1363. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.scrofa:281

F6ZRR5              	100.00%		I3LJA0              	100.00%
Bootstrap support for F6ZRR5 as seed ortholog is 100%.
Bootstrap support for I3LJA0 as seed ortholog is 100%.

Group of orthologs #1364. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 S.scrofa:200

D2KU21              	100.00%		F1RYC5              	100.00%
                    	       		F1RQB7              	49.35%
                    	       		F1SQV0              	43.26%
                    	       		F1RJ16              	29.35%
Bootstrap support for D2KU21 as seed ortholog is 100%.
Bootstrap support for F1RYC5 as seed ortholog is 100%.

Group of orthologs #1365. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 S.scrofa:469

F6VZF6              	100.00%		F1RHH2              	100.00%
                    	       		I3LA23              	81.95%
Bootstrap support for F6VZF6 as seed ortholog is 100%.
Bootstrap support for F1RHH2 as seed ortholog is 100%.

Group of orthologs #1366. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 S.scrofa:469

F6TKV3              	100.00%		F1SDW6              	100.00%
                    	       		F1SSH8              	70.24%
Bootstrap support for F6TKV3 as seed ortholog is 100%.
Bootstrap support for F1SDW6 as seed ortholog is 100%.

Group of orthologs #1367. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 S.scrofa:469

H2XL44              	100.00%		F1S742              	100.00%
Bootstrap support for H2XL44 as seed ortholog is 100%.
Bootstrap support for F1S742 as seed ortholog is 100%.

Group of orthologs #1368. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 S.scrofa:469

F7A5L4              	100.00%		I3L829              	100.00%
Bootstrap support for F7A5L4 as seed ortholog is 100%.
Bootstrap support for I3L829 as seed ortholog is 100%.

Group of orthologs #1369. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.scrofa:137

H2Y2I8              	100.00%		F1SJK4              	100.00%
Bootstrap support for H2Y2I8 as seed ortholog is 99%.
Bootstrap support for F1SJK4 as seed ortholog is 99%.

Group of orthologs #1370. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:468

F6YEL1              	100.00%		E7CXS1              	100.00%
                    	       		Q28832              	31.55%
                    	       		E7CXS0              	26.58%
Bootstrap support for F6YEL1 as seed ortholog is 99%.
Bootstrap support for E7CXS1 as seed ortholog is 100%.

Group of orthologs #1371. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 S.scrofa:73

F6VBC2              	100.00%		F1RQF1              	100.00%
                    	       		F1S8C4              	14.25%
                    	       		F1SDM3              	13.50%
Bootstrap support for F6VBC2 as seed ortholog is 100%.
Bootstrap support for F1RQF1 as seed ortholog is 83%.

Group of orthologs #1372. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.scrofa:104

H2XPZ6              	100.00%		I3LHU5              	100.00%
F6VTU7              	12.41%		F1SMT7              	71.94%
Bootstrap support for H2XPZ6 as seed ortholog is 96%.
Bootstrap support for I3LHU5 as seed ortholog is 98%.

Group of orthologs #1373. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 S.scrofa:234

F6VND6              	100.00%		F1SGE6              	100.00%
                    	       		F1RXC9              	37.17%
Bootstrap support for F6VND6 as seed ortholog is 100%.
Bootstrap support for F1SGE6 as seed ortholog is 100%.

Group of orthologs #1374. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 S.scrofa:468

F7B065              	100.00%		F1SH43              	100.00%
                    	       		F1SDY1              	5.35%
Bootstrap support for F7B065 as seed ortholog is 100%.
Bootstrap support for F1SH43 as seed ortholog is 100%.

Group of orthologs #1375. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 S.scrofa:468

H2XRS3              	100.00%		F1S8P8              	100.00%
Bootstrap support for H2XRS3 as seed ortholog is 100%.
Bootstrap support for F1S8P8 as seed ortholog is 100%.

Group of orthologs #1376. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 S.scrofa:273

H2XSK6              	100.00%		F1SFJ8              	100.00%
Bootstrap support for H2XSK6 as seed ortholog is 100%.
Bootstrap support for F1SFJ8 as seed ortholog is 100%.

Group of orthologs #1377. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 S.scrofa:244

F6YKT9              	100.00%		I3LUR5              	100.00%
Bootstrap support for F6YKT9 as seed ortholog is 100%.
Bootstrap support for I3LUR5 as seed ortholog is 100%.

Group of orthologs #1378. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 S.scrofa:231

F6QF37              	100.00%		A4Z6H1              	100.00%
                    	       		A4Z6H0              	51.96%
Bootstrap support for F6QF37 as seed ortholog is 100%.
Bootstrap support for A4Z6H1 as seed ortholog is 100%.

Group of orthologs #1379. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 S.scrofa:467

F6SCN2              	100.00%		P00346              	100.00%
                    	       		I3LB44              	63.96%
Bootstrap support for F6SCN2 as seed ortholog is 100%.
Bootstrap support for P00346 as seed ortholog is 100%.

Group of orthologs #1380. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 S.scrofa:366

F6XB39              	100.00%		F1RK74              	100.00%
Bootstrap support for F6XB39 as seed ortholog is 100%.
Bootstrap support for F1RK74 as seed ortholog is 100%.

Group of orthologs #1381. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 S.scrofa:467

F6YTX7              	100.00%		F1RYJ5              	100.00%
Bootstrap support for F6YTX7 as seed ortholog is 100%.
Bootstrap support for F1RYJ5 as seed ortholog is 100%.

Group of orthologs #1382. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 S.scrofa:372

F6W9I8              	100.00%		F1SFG2              	100.00%
Bootstrap support for F6W9I8 as seed ortholog is 100%.
Bootstrap support for F1SFG2 as seed ortholog is 100%.

Group of orthologs #1383. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 S.scrofa:314

Q4H3F3              	100.00%		A0P8Z4              	100.00%
Bootstrap support for Q4H3F3 as seed ortholog is 100%.
Bootstrap support for A0P8Z4 as seed ortholog is 100%.

Group of orthologs #1384. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 S.scrofa:178

F6SYV7              	100.00%		K7GSE0              	100.00%
Bootstrap support for F6SYV7 as seed ortholog is 100%.
Bootstrap support for K7GSE0 as seed ortholog is 99%.

Group of orthologs #1385. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 S.scrofa:89

F6YD53              	100.00%		I3LP21              	100.00%
                    	       		F1SSZ4              	20.77%
Bootstrap support for F6YD53 as seed ortholog is 100%.
Bootstrap support for I3LP21 as seed ortholog is 99%.

Group of orthologs #1386. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 S.scrofa:466

F6SCV9              	100.00%		F1RT99              	100.00%
Bootstrap support for F6SCV9 as seed ortholog is 100%.
Bootstrap support for F1RT99 as seed ortholog is 100%.

Group of orthologs #1387. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 S.scrofa:465

F6PZT9              	100.00%		F1SAB2              	100.00%
Bootstrap support for F6PZT9 as seed ortholog is 100%.
Bootstrap support for F1SAB2 as seed ortholog is 100%.

Group of orthologs #1388. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:29

H2XK79              	100.00%		F2Z565              	66.91%
H2XS68              	100.00%		Q6QRN9              	100.00%
                    	       		F1RZQ6              	61.03%
Bootstrap support for H2XK79 as seed ortholog is 99%.
Bootstrap support for H2XS68 as seed ortholog is 100%.
Bootstrap support for Q6QRN9 as seed ortholog is 86%.

Group of orthologs #1389. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 S.scrofa:464

F6UE58              	100.00%		F1S7B0              	100.00%
                    	       		I3LDR1              	17.19%
Bootstrap support for F6UE58 as seed ortholog is 100%.
Bootstrap support for F1S7B0 as seed ortholog is 100%.

Group of orthologs #1390. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 S.scrofa:464

F6SY86              	100.00%		F1SI61              	100.00%
Bootstrap support for F6SY86 as seed ortholog is 100%.
Bootstrap support for F1SI61 as seed ortholog is 100%.

Group of orthologs #1391. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 S.scrofa:120

F6XEV8              	100.00%		F1S421              	100.00%
Bootstrap support for F6XEV8 as seed ortholog is 100%.
Bootstrap support for F1S421 as seed ortholog is 99%.

Group of orthologs #1392. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 S.scrofa:464

F6T7M7              	100.00%		I3LE05              	100.00%
Bootstrap support for F6T7M7 as seed ortholog is 100%.
Bootstrap support for I3LE05 as seed ortholog is 100%.

Group of orthologs #1393. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 S.scrofa:464

F6VT08              	100.00%		P29804              	100.00%
Bootstrap support for F6VT08 as seed ortholog is 100%.
Bootstrap support for P29804 as seed ortholog is 100%.

Group of orthologs #1394. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.scrofa:193

F6UUU5              	100.00%		F1SL10              	100.00%
                    	       		I3LVN8              	47.54%
                    	       		F1S626              	46.78%
                    	       		F1SGM9              	36.74%
                    	       		I3L9C7              	36.17%
                    	       		I3LQB5              	28.98%
                    	       		F1SL09              	26.70%
                    	       		F1RIN4              	18.75%
Bootstrap support for F6UUU5 as seed ortholog is 99%.
Bootstrap support for F1SL10 as seed ortholog is 99%.

Group of orthologs #1395. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 S.scrofa:195

F7AMH7              	100.00%		P35750              	100.00%
                    	       		F1RQU6              	34.54%
                    	       		F1RG55              	29.61%
                    	       		P43368              	28.70%
                    	       		F1RI38              	10.47%
                    	       		I3LQD3              	5.74%
Bootstrap support for F7AMH7 as seed ortholog is 100%.
Bootstrap support for P35750 as seed ortholog is 99%.

Group of orthologs #1396. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 S.scrofa:268

F7ACA9              	100.00%		F1RG75              	100.00%
                    	       		F1RIU5              	13.39%
Bootstrap support for F7ACA9 as seed ortholog is 100%.
Bootstrap support for F1RG75 as seed ortholog is 100%.

Group of orthologs #1397. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.scrofa:463

F7B9U5              	100.00%		F1SK15              	100.00%
Bootstrap support for F7B9U5 as seed ortholog is 100%.
Bootstrap support for F1SK15 as seed ortholog is 100%.

Group of orthologs #1398. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 S.scrofa:419

F6WYI2              	100.00%		I3LBK9              	100.00%
Bootstrap support for F6WYI2 as seed ortholog is 100%.
Bootstrap support for I3LBK9 as seed ortholog is 100%.

Group of orthologs #1399. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:80

H2XNY7              	100.00%		Q4LE88              	100.00%
Bootstrap support for H2XNY7 as seed ortholog is 100%.
Bootstrap support for Q4LE88 as seed ortholog is 98%.

Group of orthologs #1400. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 S.scrofa:52

F6Q2J0              	100.00%		I3LI83              	100.00%
Bootstrap support for F6Q2J0 as seed ortholog is 100%.
Bootstrap support for I3LI83 as seed ortholog is 88%.

Group of orthologs #1401. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 S.scrofa:462

H2Y0R2              	100.00%		F1RKG3              	100.00%
Bootstrap support for H2Y0R2 as seed ortholog is 100%.
Bootstrap support for F1RKG3 as seed ortholog is 100%.

Group of orthologs #1402. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 S.scrofa:462

F6Z9J5              	100.00%		F1SNI1              	100.00%
Bootstrap support for F6Z9J5 as seed ortholog is 100%.
Bootstrap support for F1SNI1 as seed ortholog is 100%.

Group of orthologs #1403. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:461 S.scrofa:117

F6TM19              	100.00%		F1SJY6              	100.00%
                    	       		F1RHN2              	21.55%
Bootstrap support for F6TM19 as seed ortholog is 100%.
Bootstrap support for F1SJY6 as seed ortholog is 94%.

Group of orthologs #1404. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 S.scrofa:461

H2Y0B3              	100.00%		F1SKP6              	100.00%
                    	       		F1RIV1              	16.03%
Bootstrap support for H2Y0B3 as seed ortholog is 100%.
Bootstrap support for F1SKP6 as seed ortholog is 100%.

Group of orthologs #1405. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:461 S.scrofa:461

F6Q2Q3              	100.00%		F1SA91              	100.00%
Bootstrap support for F6Q2Q3 as seed ortholog is 100%.
Bootstrap support for F1SA91 as seed ortholog is 100%.

Group of orthologs #1406. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 S.scrofa:92

F6R3U4              	100.00%		I3LU51              	100.00%
Bootstrap support for F6R3U4 as seed ortholog is 92%.
Bootstrap support for I3LU51 as seed ortholog is 84%.

Group of orthologs #1407. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 S.scrofa:123

H2XLQ1              	100.00%		F1RJ39              	100.00%
                    	       		F1RJ38              	96.03%
                    	       		I3LUG2              	48.20%
                    	       		Q6KEQ9              	47.51%
                    	       		F1S4M3              	14.64%
                    	       		I3L7J4              	14.51%
Bootstrap support for H2XLQ1 as seed ortholog is 99%.
Bootstrap support for F1RJ39 as seed ortholog is 98%.

Group of orthologs #1408. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 S.scrofa:330

H2XKS2              	100.00%		F1SKD7              	100.00%
                    	       		F1SFR8              	31.19%
Bootstrap support for H2XKS2 as seed ortholog is 100%.
Bootstrap support for F1SKD7 as seed ortholog is 100%.

Group of orthologs #1409. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 S.scrofa:460

F6X413              	100.00%		F1RU39              	100.00%
Bootstrap support for F6X413 as seed ortholog is 100%.
Bootstrap support for F1RU39 as seed ortholog is 100%.

Group of orthologs #1410. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 S.scrofa:460

F6U5W6              	100.00%		F1SJL5              	100.00%
Bootstrap support for F6U5W6 as seed ortholog is 100%.
Bootstrap support for F1SJL5 as seed ortholog is 100%.

Group of orthologs #1411. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 S.scrofa:460

H2Y123              	100.00%		F1RQU1              	100.00%
Bootstrap support for H2Y123 as seed ortholog is 100%.
Bootstrap support for F1RQU1 as seed ortholog is 100%.

Group of orthologs #1412. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 S.scrofa:460

F7AYX3              	100.00%		F1SJ94              	100.00%
Bootstrap support for F7AYX3 as seed ortholog is 100%.
Bootstrap support for F1SJ94 as seed ortholog is 100%.

Group of orthologs #1413. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 S.scrofa:460

F6ZHM4              	100.00%		F1SQK6              	100.00%
Bootstrap support for F6ZHM4 as seed ortholog is 100%.
Bootstrap support for F1SQK6 as seed ortholog is 100%.

Group of orthologs #1414. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:459 S.scrofa:459

F6YH10              	100.00%		F1RZV4              	100.00%
Bootstrap support for F6YH10 as seed ortholog is 100%.
Bootstrap support for F1RZV4 as seed ortholog is 100%.

Group of orthologs #1415. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 S.scrofa:360

F7BQ53              	100.00%		F1S2K2              	100.00%
Bootstrap support for F7BQ53 as seed ortholog is 100%.
Bootstrap support for F1S2K2 as seed ortholog is 100%.

Group of orthologs #1416. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:383

F6S9Y0              	100.00%		I3LL84              	100.00%
Bootstrap support for F6S9Y0 as seed ortholog is 99%.
Bootstrap support for I3LL84 as seed ortholog is 100%.

Group of orthologs #1417. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 S.scrofa:358

H2XZV4              	100.00%		F1RZC0              	100.00%
Bootstrap support for H2XZV4 as seed ortholog is 100%.
Bootstrap support for F1RZC0 as seed ortholog is 100%.

Group of orthologs #1418. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.scrofa:74

F6TVX8              	100.00%		F1RF44              	100.00%
                    	       		P20303              	24.35%
Bootstrap support for F6TVX8 as seed ortholog is 99%.
Bootstrap support for F1RF44 as seed ortholog is 96%.

Group of orthologs #1419. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 S.scrofa:458

F7AEM1              	100.00%		F1SQ40              	100.00%
Bootstrap support for F7AEM1 as seed ortholog is 100%.
Bootstrap support for F1SQ40 as seed ortholog is 100%.

Group of orthologs #1420. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 S.scrofa:458

F7AB27              	100.00%		F1SRQ4              	100.00%
Bootstrap support for F7AB27 as seed ortholog is 100%.
Bootstrap support for F1SRQ4 as seed ortholog is 100%.

Group of orthologs #1421. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 S.scrofa:457

F6WCA3              	100.00%		F1SCN0              	100.00%
                    	       		F1S039              	26.75%
                    	       		F1S576              	11.97%
Bootstrap support for F6WCA3 as seed ortholog is 100%.
Bootstrap support for F1SCN0 as seed ortholog is 100%.

Group of orthologs #1422. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 S.scrofa:457

F7BKI5              	100.00%		F1RM51              	100.00%
                    	       		F1S3T0              	37.78%
Bootstrap support for F7BKI5 as seed ortholog is 100%.
Bootstrap support for F1RM51 as seed ortholog is 100%.

Group of orthologs #1423. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 S.scrofa:236

F7AB24              	100.00%		F1SE04              	100.00%
Bootstrap support for F7AB24 as seed ortholog is 100%.
Bootstrap support for F1SE04 as seed ortholog is 100%.

Group of orthologs #1424. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 S.scrofa:79

F6VCG5              	100.00%		I3LL51              	100.00%
Bootstrap support for F6VCG5 as seed ortholog is 100%.
Bootstrap support for I3LL51 as seed ortholog is 99%.

Group of orthologs #1425. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 S.scrofa:309

F6TYX5              	100.00%		F1RTK0              	100.00%
                    	       		I3LLE9              	62.54%
Bootstrap support for F6TYX5 as seed ortholog is 100%.
Bootstrap support for F1RTK0 as seed ortholog is 100%.

Group of orthologs #1426. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 S.scrofa:381

F6YGR5              	100.00%		F1RU17              	100.00%
                    	       		F1SBI1              	11.01%
Bootstrap support for F6YGR5 as seed ortholog is 100%.
Bootstrap support for F1RU17 as seed ortholog is 100%.

Group of orthologs #1427. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.scrofa:456

F6UB18              	100.00%		F1S9B2              	100.00%
                    	       		F1SH22              	49.78%
Bootstrap support for F6UB18 as seed ortholog is 99%.
Bootstrap support for F1S9B2 as seed ortholog is 100%.

Group of orthologs #1428. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.scrofa:194

F7AQQ6              	100.00%		F1SGP9              	100.00%
                    	       		K7GQL2              	9.42%
Bootstrap support for F7AQQ6 as seed ortholog is 78%.
Bootstrap support for F1SGP9 as seed ortholog is 99%.

Group of orthologs #1429. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.scrofa:85

F6TXS7              	100.00%		F1RPN0              	100.00%
Bootstrap support for F6TXS7 as seed ortholog is 93%.
Bootstrap support for F1RPN0 as seed ortholog is 95%.

Group of orthologs #1430. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 S.scrofa:456

F6ZU53              	100.00%		B5U335              	100.00%
Bootstrap support for F6ZU53 as seed ortholog is 100%.
Bootstrap support for B5U335 as seed ortholog is 100%.

Group of orthologs #1431. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 S.scrofa:456

F6XP34              	100.00%		F1SQU5              	100.00%
Bootstrap support for F6XP34 as seed ortholog is 100%.
Bootstrap support for F1SQU5 as seed ortholog is 100%.

Group of orthologs #1432. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 S.scrofa:456

F7AFD2              	100.00%		I3L667              	100.00%
Bootstrap support for F7AFD2 as seed ortholog is 100%.
Bootstrap support for I3L667 as seed ortholog is 100%.

Group of orthologs #1433. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 S.scrofa:456

F7BQ44              	100.00%		I3L5J9              	100.00%
Bootstrap support for F7BQ44 as seed ortholog is 100%.
Bootstrap support for I3L5J9 as seed ortholog is 100%.

Group of orthologs #1434. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.scrofa:455

F6W254              	100.00%		F1S4D0              	100.00%
H2Y2V2              	64.27%		Q9TUB5              	42.46%
F6ZJI3              	6.54%		F1S4C6              	16.52%
H2XVX3              	6.47%		
Bootstrap support for F6W254 as seed ortholog is 99%.
Bootstrap support for F1S4D0 as seed ortholog is 100%.

Group of orthologs #1435. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.scrofa:195

F6SM91              	100.00%		I3LI73              	100.00%
F6SMM7              	42.58%		F1SA65              	12.44%
F7B0A1              	38.83%		
F6SDH3              	18.75%		
F6U7F8              	8.67%		
Bootstrap support for F6SM91 as seed ortholog is 97%.
Bootstrap support for I3LI73 as seed ortholog is 99%.

Group of orthologs #1436. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.scrofa:263

F6WTG3              	100.00%		F1ST15              	100.00%
                    	       		F1SHM1              	30.69%
                    	       		F1S8E8              	15.66%
                    	       		F1SAI1              	11.90%
Bootstrap support for F6WTG3 as seed ortholog is 99%.
Bootstrap support for F1ST15 as seed ortholog is 100%.

Group of orthologs #1437. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 S.scrofa:455

F6UCG6              	100.00%		F1S6H5              	100.00%
                    	       		I3LGR7              	7.40%
                    	       		F1RF24              	6.33%
Bootstrap support for F6UCG6 as seed ortholog is 100%.
Bootstrap support for F1S6H5 as seed ortholog is 100%.

Group of orthologs #1438. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.scrofa:213

F6VGZ6              	100.00%		F1SDM5              	100.00%
Bootstrap support for F6VGZ6 as seed ortholog is 99%.
Bootstrap support for F1SDM5 as seed ortholog is 99%.

Group of orthologs #1439. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 S.scrofa:455

F6ZS66              	100.00%		F1SQG6              	100.00%
Bootstrap support for F6ZS66 as seed ortholog is 100%.
Bootstrap support for F1SQG6 as seed ortholog is 100%.

Group of orthologs #1440. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 S.scrofa:455

F6ZLM3              	100.00%		Q29214              	100.00%
Bootstrap support for F6ZLM3 as seed ortholog is 100%.
Bootstrap support for Q29214 as seed ortholog is 100%.

Group of orthologs #1441. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 S.scrofa:135

F7BAF2              	100.00%		F1SB52              	100.00%
                    	       		F1SKK6              	12.09%
                    	       		I3L8V6              	8.29%
                    	       		I3LF55              	5.59%
Bootstrap support for F7BAF2 as seed ortholog is 74%.
Alternative seed ortholog is F6VIT0 (28 bits away from this cluster)
Bootstrap support for F1SB52 as seed ortholog is 99%.

Group of orthologs #1442. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:108

F6RF92              	100.00%		F1RMH1              	100.00%
Bootstrap support for F6RF92 as seed ortholog is 100%.
Bootstrap support for F1RMH1 as seed ortholog is 99%.

Group of orthologs #1443. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 S.scrofa:454

F6SYW5              	100.00%		F1SJR7              	100.00%
Bootstrap support for F6SYW5 as seed ortholog is 100%.
Bootstrap support for F1SJR7 as seed ortholog is 100%.

Group of orthologs #1444. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 S.scrofa:290

F6S4S1              	100.00%		B8XSK1              	100.00%
                    	       		F1SDH2              	12.95%
Bootstrap support for F6S4S1 as seed ortholog is 100%.
Bootstrap support for B8XSK1 as seed ortholog is 100%.

Group of orthologs #1445. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 S.scrofa:453

F6SGZ6              	100.00%		F1SD63              	100.00%
                    	       		F1S6H6              	8.65%
Bootstrap support for F6SGZ6 as seed ortholog is 100%.
Bootstrap support for F1SD63 as seed ortholog is 100%.

Group of orthologs #1446. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 S.scrofa:343

F6VP14              	100.00%		F1RR65              	100.00%
Bootstrap support for F6VP14 as seed ortholog is 100%.
Bootstrap support for F1RR65 as seed ortholog is 100%.

Group of orthologs #1447. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 S.scrofa:453

F6QX88              	100.00%		F1SP83              	100.00%
Bootstrap support for F6QX88 as seed ortholog is 100%.
Bootstrap support for F1SP83 as seed ortholog is 100%.

Group of orthologs #1448. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 S.scrofa:453

F6QSJ0              	100.00%		I3L5U8              	100.00%
Bootstrap support for F6QSJ0 as seed ortholog is 100%.
Bootstrap support for I3L5U8 as seed ortholog is 100%.

Group of orthologs #1449. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 S.scrofa:453

F6TBI8              	100.00%		I3LHX6              	100.00%
Bootstrap support for F6TBI8 as seed ortholog is 100%.
Bootstrap support for I3LHX6 as seed ortholog is 100%.

Group of orthologs #1450. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 S.scrofa:453

F6WK69              	100.00%		I3LF05              	100.00%
Bootstrap support for F6WK69 as seed ortholog is 100%.
Bootstrap support for I3LF05 as seed ortholog is 100%.

Group of orthologs #1451. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 S.scrofa:453

H2XYF8              	100.00%		I3L8K6              	100.00%
Bootstrap support for H2XYF8 as seed ortholog is 100%.
Bootstrap support for I3L8K6 as seed ortholog is 100%.

Group of orthologs #1452. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:452 S.scrofa:452

F6Q512              	100.00%		F1S8W1              	100.00%
Bootstrap support for F6Q512 as seed ortholog is 100%.
Bootstrap support for F1S8W1 as seed ortholog is 100%.

Group of orthologs #1453. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:344

F6XXW0              	100.00%		F1SS51              	100.00%
Bootstrap support for F6XXW0 as seed ortholog is 100%.
Bootstrap support for F1SS51 as seed ortholog is 100%.

Group of orthologs #1454. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:452 S.scrofa:392

F7ACM5              	100.00%		F2Z5J6              	100.00%
Bootstrap support for F7ACM5 as seed ortholog is 100%.
Bootstrap support for F2Z5J6 as seed ortholog is 100%.

Group of orthologs #1455. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:452 S.scrofa:330

F6YVQ9              	100.00%		I3LF74              	100.00%
Bootstrap support for F6YVQ9 as seed ortholog is 100%.
Bootstrap support for I3LF74 as seed ortholog is 100%.

Group of orthologs #1456. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:452 S.scrofa:269

H2XMT7              	100.00%		I3LLR6              	100.00%
Bootstrap support for H2XMT7 as seed ortholog is 100%.
Bootstrap support for I3LLR6 as seed ortholog is 99%.

Group of orthologs #1457. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.scrofa:202

B1H3L8              	100.00%		I3LU85              	100.00%
                    	       		I3LQK2              	25.30%
Bootstrap support for B1H3L8 as seed ortholog is 99%.
Bootstrap support for I3LU85 as seed ortholog is 99%.

Group of orthologs #1458. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:451 S.scrofa:451

F6ULY5              	100.00%		F1SSI5              	100.00%
Bootstrap support for F6ULY5 as seed ortholog is 100%.
Bootstrap support for F1SSI5 as seed ortholog is 100%.

Group of orthologs #1459. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:451 S.scrofa:187

F6YS00              	100.00%		F1STQ7              	100.00%
Bootstrap support for F6YS00 as seed ortholog is 100%.
Bootstrap support for F1STQ7 as seed ortholog is 99%.

Group of orthologs #1460. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 S.scrofa:451

H2XYW0              	100.00%		I3L6B9              	100.00%
Bootstrap support for H2XYW0 as seed ortholog is 100%.
Bootstrap support for I3L6B9 as seed ortholog is 100%.

Group of orthologs #1461. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 S.scrofa:450

F6PKM8              	100.00%		F1RWC3              	100.00%
H2XQR0              	5.37%		
Bootstrap support for F6PKM8 as seed ortholog is 100%.
Bootstrap support for F1RWC3 as seed ortholog is 100%.

Group of orthologs #1462. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 S.scrofa:450

F7B568              	100.00%		F1RX83              	100.00%
                    	       		B8XSJ1              	17.84%
Bootstrap support for F7B568 as seed ortholog is 100%.
Bootstrap support for F1RX83 as seed ortholog is 100%.

Group of orthologs #1463. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 S.scrofa:450

F6R6C4              	100.00%		F1RU31              	100.00%
Bootstrap support for F6R6C4 as seed ortholog is 100%.
Bootstrap support for F1RU31 as seed ortholog is 100%.

Group of orthologs #1464. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 S.scrofa:450

F7AUL7              	100.00%		F1S8Y2              	100.00%
Bootstrap support for F7AUL7 as seed ortholog is 100%.
Bootstrap support for F1S8Y2 as seed ortholog is 100%.

Group of orthologs #1465. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 S.scrofa:450

H2XYI9              	100.00%		P79282              	100.00%
Bootstrap support for H2XYI9 as seed ortholog is 99%.
Bootstrap support for P79282 as seed ortholog is 100%.

Group of orthologs #1466. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 S.scrofa:232

F6WDR9              	100.00%		Q66T47              	100.00%
                    	       		F1S0H6              	48.01%
Bootstrap support for F6WDR9 as seed ortholog is 100%.
Bootstrap support for Q66T47 as seed ortholog is 100%.

Group of orthologs #1467. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 S.scrofa:449

F6TJV9              	100.00%		F1RTV5              	100.00%
Bootstrap support for F6TJV9 as seed ortholog is 100%.
Bootstrap support for F1RTV5 as seed ortholog is 100%.

Group of orthologs #1468. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 S.scrofa:449

F6RNB7              	100.00%		F1SUH7              	100.00%
Bootstrap support for F6RNB7 as seed ortholog is 100%.
Bootstrap support for F1SUH7 as seed ortholog is 100%.

Group of orthologs #1469. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 S.scrofa:448

F6QIL3              	100.00%		A5A8X7              	100.00%
                    	       		F1RS30              	27.19%
                    	       		F1S218              	20.57%
Bootstrap support for F6QIL3 as seed ortholog is 100%.
Bootstrap support for A5A8X7 as seed ortholog is 100%.

Group of orthologs #1470. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 S.scrofa:448

F7B9Q3              	100.00%		F1S8P9              	100.00%
                    	       		F1S5M9              	23.92%
                    	       		I3L5B0              	17.89%
Bootstrap support for F7B9Q3 as seed ortholog is 100%.
Bootstrap support for F1S8P9 as seed ortholog is 100%.

Group of orthologs #1471. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 S.scrofa:168

F7ALU0              	100.00%		F1SQX2              	100.00%
                    	       		F1RYY5              	7.76%
Bootstrap support for F7ALU0 as seed ortholog is 100%.
Bootstrap support for F1SQX2 as seed ortholog is 99%.

Group of orthologs #1472. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 S.scrofa:448

F6YQR4              	100.00%		I3LI86              	100.00%
                    	       		I3L9F2              	67.92%
Bootstrap support for F6YQR4 as seed ortholog is 100%.
Bootstrap support for I3LI86 as seed ortholog is 100%.

Group of orthologs #1473. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 S.scrofa:274

F6X3X4              	100.00%		F1RFX9              	100.00%
Bootstrap support for F6X3X4 as seed ortholog is 100%.
Bootstrap support for F1RFX9 as seed ortholog is 100%.

Group of orthologs #1474. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 S.scrofa:322

F6YEI6              	100.00%		A2BD05              	100.00%
Bootstrap support for F6YEI6 as seed ortholog is 100%.
Bootstrap support for A2BD05 as seed ortholog is 100%.

Group of orthologs #1475. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.scrofa:342

F7BJ92              	100.00%		F1SA79              	100.00%
Bootstrap support for F7BJ92 as seed ortholog is 100%.
Bootstrap support for F1SA79 as seed ortholog is 100%.

Group of orthologs #1476. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 S.scrofa:448

H2XT24              	100.00%		F1SK46              	100.00%
Bootstrap support for H2XT24 as seed ortholog is 100%.
Bootstrap support for F1SK46 as seed ortholog is 100%.

Group of orthologs #1477. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 S.scrofa:133

F7BA18              	100.00%		I3LR86              	100.00%
Bootstrap support for F7BA18 as seed ortholog is 100%.
Bootstrap support for I3LR86 as seed ortholog is 99%.

Group of orthologs #1478. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 S.scrofa:447

F7A8T7              	100.00%		F1SF01              	100.00%
                    	       		I3LHM9              	42.12%
Bootstrap support for F7A8T7 as seed ortholog is 100%.
Bootstrap support for F1SF01 as seed ortholog is 100%.

Group of orthologs #1479. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 S.scrofa:447

F6RLP1              	100.00%		F1RJW3              	100.00%
Bootstrap support for F6RLP1 as seed ortholog is 100%.
Bootstrap support for F1RJW3 as seed ortholog is 100%.

Group of orthologs #1480. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 S.scrofa:447

H2XLN7              	100.00%		F1RKQ4              	100.00%
Bootstrap support for H2XLN7 as seed ortholog is 100%.
Bootstrap support for F1RKQ4 as seed ortholog is 100%.

Group of orthologs #1481. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 S.scrofa:447

F6VEG5              	100.00%		F1SJ23              	100.00%
Bootstrap support for F6VEG5 as seed ortholog is 100%.
Bootstrap support for F1SJ23 as seed ortholog is 100%.

Group of orthologs #1482. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:81

F7B3K0              	100.00%		F1S4T1              	100.00%
Bootstrap support for F7B3K0 as seed ortholog is 100%.
Bootstrap support for F1S4T1 as seed ortholog is 99%.

Group of orthologs #1483. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 S.scrofa:447

F6ZPV8              	100.00%		F1SNA8              	100.00%
Bootstrap support for F6ZPV8 as seed ortholog is 100%.
Bootstrap support for F1SNA8 as seed ortholog is 100%.

Group of orthologs #1484. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 S.scrofa:446

F6VFM3              	100.00%		F1SKA4              	100.00%
                    	       		F1RYZ3              	35.62%
                    	       		F1S6X0              	18.04%
Bootstrap support for F6VFM3 as seed ortholog is 100%.
Bootstrap support for F1SKA4 as seed ortholog is 100%.

Group of orthologs #1485. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 S.scrofa:446

F6Q643              	100.00%		F1RTL7              	100.00%
                    	       		F1RTP2              	100.00%
Bootstrap support for F6Q643 as seed ortholog is 100%.
Bootstrap support for F1RTL7 as seed ortholog is 100%.
Bootstrap support for F1RTP2 as seed ortholog is 100%.

Group of orthologs #1486. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 S.scrofa:446

F6Q6E0              	100.00%		F1S111              	100.00%
                    	       		F1S110              	16.91%
Bootstrap support for F6Q6E0 as seed ortholog is 56%.
Alternative seed ortholog is F6WXB6 (11 bits away from this cluster)
Bootstrap support for F1S111 as seed ortholog is 100%.

Group of orthologs #1487. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 S.scrofa:446

F6YNH3              	100.00%		F1SDN3              	100.00%
Bootstrap support for F6YNH3 as seed ortholog is 100%.
Bootstrap support for F1SDN3 as seed ortholog is 100%.

Group of orthologs #1488. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 S.scrofa:446

F6VEU2              	100.00%		I3LGX0              	100.00%
Bootstrap support for F6VEU2 as seed ortholog is 100%.
Bootstrap support for I3LGX0 as seed ortholog is 100%.

Group of orthologs #1489. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 S.scrofa:35

F6XFV3              	100.00%		Q28970              	100.00%
Bootstrap support for F6XFV3 as seed ortholog is 99%.
Bootstrap support for Q28970 as seed ortholog is 77%.

Group of orthologs #1490. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 S.scrofa:326

Q4H383              	100.00%		I3L5D4              	100.00%
Bootstrap support for Q4H383 as seed ortholog is 100%.
Bootstrap support for I3L5D4 as seed ortholog is 100%.

Group of orthologs #1491. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:445 S.scrofa:445

F6Z6L1              	100.00%		B7TY10              	100.00%
Bootstrap support for F6Z6L1 as seed ortholog is 100%.
Bootstrap support for B7TY10 as seed ortholog is 100%.

Group of orthologs #1492. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:445 S.scrofa:445

F6YGJ1              	100.00%		F1SNT0              	100.00%
Bootstrap support for F6YGJ1 as seed ortholog is 100%.
Bootstrap support for F1SNT0 as seed ortholog is 100%.

Group of orthologs #1493. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 S.scrofa:444

F6YD02              	100.00%		F2Z5P7              	100.00%
                    	       		F1SDH7              	29.68%
                    	       		F1RIF1              	20.00%
Bootstrap support for F6YD02 as seed ortholog is 100%.
Bootstrap support for F2Z5P7 as seed ortholog is 100%.

Group of orthologs #1494. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 S.scrofa:444

F6WRC9              	100.00%		I3LIR5              	100.00%
                    	       		I3LBL4              	19.00%
Bootstrap support for F6WRC9 as seed ortholog is 100%.
Bootstrap support for I3LIR5 as seed ortholog is 100%.

Group of orthologs #1495. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 S.scrofa:404

F6TDN1              	100.00%		D2ST34              	100.00%
Bootstrap support for F6TDN1 as seed ortholog is 100%.
Bootstrap support for D2ST34 as seed ortholog is 100%.

Group of orthologs #1496. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 S.scrofa:444

F6RJV3              	100.00%		F1SJX1              	100.00%
Bootstrap support for F6RJV3 as seed ortholog is 100%.
Bootstrap support for F1SJX1 as seed ortholog is 100%.

Group of orthologs #1497. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 S.scrofa:318

F6RTW0              	100.00%		D7RA17              	100.00%
Bootstrap support for F6RTW0 as seed ortholog is 100%.
Bootstrap support for D7RA17 as seed ortholog is 100%.

Group of orthologs #1498. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 S.scrofa:443

F6YN96              	100.00%		F1S4B8              	100.00%
Bootstrap support for F6YN96 as seed ortholog is 100%.
Bootstrap support for F1S4B8 as seed ortholog is 100%.

Group of orthologs #1499. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 S.scrofa:443

F6YYW3              	100.00%		F1STG2              	100.00%
Bootstrap support for F6YYW3 as seed ortholog is 100%.
Bootstrap support for F1STG2 as seed ortholog is 100%.

Group of orthologs #1500. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 S.scrofa:443

Q4H352              	100.00%		I3LAC0              	100.00%
Bootstrap support for Q4H352 as seed ortholog is 100%.
Bootstrap support for I3LAC0 as seed ortholog is 100%.

Group of orthologs #1501. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 S.scrofa:363

F6TFD0              	100.00%		F1RFA8              	100.00%
Bootstrap support for F6TFD0 as seed ortholog is 100%.
Bootstrap support for F1RFA8 as seed ortholog is 100%.

Group of orthologs #1502. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 S.scrofa:442

F6URQ9              	100.00%		F1RQR0              	100.00%
Bootstrap support for F6URQ9 as seed ortholog is 100%.
Bootstrap support for F1RQR0 as seed ortholog is 100%.

Group of orthologs #1503. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 S.scrofa:442

F6ZY58              	100.00%		F1S8E9              	100.00%
Bootstrap support for F6ZY58 as seed ortholog is 100%.
Bootstrap support for F1S8E9 as seed ortholog is 100%.

Group of orthologs #1504. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 S.scrofa:441

F7B330              	100.00%		F1RN34              	100.00%
Bootstrap support for F7B330 as seed ortholog is 100%.
Bootstrap support for F1RN34 as seed ortholog is 100%.

Group of orthologs #1505. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:440

F6PGY3              	100.00%		F1SRJ8              	100.00%
Bootstrap support for F6PGY3 as seed ortholog is 99%.
Bootstrap support for F1SRJ8 as seed ortholog is 100%.

Group of orthologs #1506. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 S.scrofa:440

F6Q5D4              	100.00%		F1SSE6              	100.00%
Bootstrap support for F6Q5D4 as seed ortholog is 100%.
Bootstrap support for F1SSE6 as seed ortholog is 100%.

Group of orthologs #1507. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 S.scrofa:296

F6PW34              	100.00%		F1SVA6              	100.00%
Bootstrap support for F6PW34 as seed ortholog is 100%.
Bootstrap support for F1SVA6 as seed ortholog is 100%.

Group of orthologs #1508. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:292

F7BFE1              	100.00%		F1RZ33              	100.00%
                    	       		F1S425              	57.72%
                    	       		I3LLU5              	40.80%
                    	       		I3LK30              	32.87%
                    	       		F1SIZ5              	15.52%
                    	       		F1S737              	15.10%
Bootstrap support for F7BFE1 as seed ortholog is 88%.
Bootstrap support for F1RZ33 as seed ortholog is 99%.

Group of orthologs #1509. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 S.scrofa:439

F6YHC8              	100.00%		F1S0R4              	100.00%
                    	       		F1SAA2              	9.97%
Bootstrap support for F6YHC8 as seed ortholog is 100%.
Bootstrap support for F1S0R4 as seed ortholog is 100%.

Group of orthologs #1510. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 S.scrofa:439

F6UZR0              	100.00%		F1RKV6              	100.00%
Bootstrap support for F6UZR0 as seed ortholog is 100%.
Bootstrap support for F1RKV6 as seed ortholog is 100%.

Group of orthologs #1511. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.scrofa:439

H2XP90              	100.00%		F1S0H1              	100.00%
Bootstrap support for H2XP90 as seed ortholog is 99%.
Bootstrap support for F1S0H1 as seed ortholog is 100%.

Group of orthologs #1512. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 S.scrofa:346

F6Z188              	100.00%		F1SUQ8              	100.00%
Bootstrap support for F6Z188 as seed ortholog is 100%.
Bootstrap support for F1SUQ8 as seed ortholog is 100%.

Group of orthologs #1513. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 S.scrofa:438

F6U315              	100.00%		F1SPS7              	100.00%
                    	       		P19205              	99.91%
                    	       		I3LEU6              	85.32%
Bootstrap support for F6U315 as seed ortholog is 100%.
Bootstrap support for F1SPS7 as seed ortholog is 100%.

Group of orthologs #1514. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 S.scrofa:292

H2XY01              	100.00%		F1SDC4              	100.00%
                    	       		F1SDC7              	13.66%
                    	       		F1RVP6              	8.20%
Bootstrap support for H2XY01 as seed ortholog is 54%.
Alternative seed ortholog is F6Q7A6 (4 bits away from this cluster)
Bootstrap support for F1SDC4 as seed ortholog is 100%.

Group of orthologs #1515. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.scrofa:438

F6TV83              	100.00%		O19064              	100.00%
                    	       		F1S936              	32.89%
                    	       		F1S3L9              	16.10%
Bootstrap support for F6TV83 as seed ortholog is 99%.
Bootstrap support for O19064 as seed ortholog is 100%.

Group of orthologs #1516. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 S.scrofa:146

F6YCW2              	100.00%		P50133              	100.00%
F6V0N3              	62.56%		F1SST8              	9.52%
Bootstrap support for F6YCW2 as seed ortholog is 100%.
Bootstrap support for P50133 as seed ortholog is 99%.

Group of orthologs #1517. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 S.scrofa:136

F6VRW9              	100.00%		F1SNN6              	100.00%
                    	       		F1REZ7              	38.13%
Bootstrap support for F6VRW9 as seed ortholog is 99%.
Bootstrap support for F1SNN6 as seed ortholog is 61%.
Alternative seed ortholog is A5GFR9 (136 bits away from this cluster)

Group of orthologs #1518. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 S.scrofa:438

F6TC27              	100.00%		I3LUP1              	100.00%
                    	       		I3L5P2              	54.07%
Bootstrap support for F6TC27 as seed ortholog is 99%.
Bootstrap support for I3LUP1 as seed ortholog is 100%.

Group of orthologs #1519. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 S.scrofa:438

F6PJU1              	100.00%		F1S413              	100.00%
Bootstrap support for F6PJU1 as seed ortholog is 100%.
Bootstrap support for F1S413 as seed ortholog is 100%.

Group of orthologs #1520. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.scrofa:310

F6UEG1              	100.00%		F1RZ81              	100.00%
Bootstrap support for F6UEG1 as seed ortholog is 97%.
Bootstrap support for F1RZ81 as seed ortholog is 100%.

Group of orthologs #1521. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 S.scrofa:438

F6R5Z4              	100.00%		F1SUY6              	100.00%
Bootstrap support for F6R5Z4 as seed ortholog is 100%.
Bootstrap support for F1SUY6 as seed ortholog is 100%.

Group of orthologs #1522. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 S.scrofa:169

F6VL41              	100.00%		F1SUR7              	100.00%
Bootstrap support for F6VL41 as seed ortholog is 100%.
Bootstrap support for F1SUR7 as seed ortholog is 100%.

Group of orthologs #1523. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 S.scrofa:343

F6PTJ9              	100.00%		I3LTN6              	100.00%
Bootstrap support for F6PTJ9 as seed ortholog is 99%.
Bootstrap support for I3LTN6 as seed ortholog is 100%.

Group of orthologs #1524. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 S.scrofa:436

F6U254              	100.00%		F1SUE0              	100.00%
                    	       		I3LLT6              	71.83%
                    	       		I3L5X5              	36.55%
                    	       		I3LMY7              	31.58%
Bootstrap support for F6U254 as seed ortholog is 100%.
Bootstrap support for F1SUE0 as seed ortholog is 100%.

Group of orthologs #1525. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 S.scrofa:327

F6YEH2              	100.00%		F1SIV9              	100.00%
                    	       		F1SRK2              	39.75%
                    	       		I3LNZ6              	5.08%
Bootstrap support for F6YEH2 as seed ortholog is 100%.
Bootstrap support for F1SIV9 as seed ortholog is 100%.

Group of orthologs #1526. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 S.scrofa:213

F6ZRP3              	100.00%		F1SM61              	100.00%
                    	       		I3LVS5              	54.70%
Bootstrap support for F6ZRP3 as seed ortholog is 99%.
Bootstrap support for F1SM61 as seed ortholog is 99%.

Group of orthologs #1527. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 S.scrofa:303

H2XWJ0              	100.00%		F1S733              	100.00%
                    	       		F1S1L3              	32.54%
Bootstrap support for H2XWJ0 as seed ortholog is 100%.
Bootstrap support for F1S733 as seed ortholog is 100%.

Group of orthologs #1528. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 S.scrofa:436

F6UHC9              	100.00%		F1RNN4              	100.00%
Bootstrap support for F6UHC9 as seed ortholog is 100%.
Bootstrap support for F1RNN4 as seed ortholog is 100%.

Group of orthologs #1529. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 S.scrofa:436

F6WXF1              	100.00%		F1RY62              	100.00%
Bootstrap support for F6WXF1 as seed ortholog is 100%.
Bootstrap support for F1RY62 as seed ortholog is 100%.

Group of orthologs #1530. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 S.scrofa:37

F7AV11              	100.00%		F1SEV5              	100.00%
Bootstrap support for F7AV11 as seed ortholog is 100%.
Bootstrap support for F1SEV5 as seed ortholog is 80%.

Group of orthologs #1531. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 S.scrofa:356

F6ZCY4              	100.00%		F1SMA1              	100.00%
Bootstrap support for F6ZCY4 as seed ortholog is 100%.
Bootstrap support for F1SMA1 as seed ortholog is 100%.

Group of orthologs #1532. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 S.scrofa:151

F6UZS7              	100.00%		I3LLU0              	100.00%
Bootstrap support for F6UZS7 as seed ortholog is 100%.
Bootstrap support for I3LLU0 as seed ortholog is 100%.

Group of orthologs #1533. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 S.scrofa:436

H2XLX2              	100.00%		F1SP24              	100.00%
Bootstrap support for H2XLX2 as seed ortholog is 100%.
Bootstrap support for F1SP24 as seed ortholog is 100%.

Group of orthologs #1534. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 S.scrofa:435

F6X9B1              	100.00%		F1SS17              	100.00%
                    	       		F1S407              	21.86%
                    	       		F1RI45              	10.42%
                    	       		F1RQP7              	6.61%
Bootstrap support for F6X9B1 as seed ortholog is 100%.
Bootstrap support for F1SS17 as seed ortholog is 100%.

Group of orthologs #1535. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 S.scrofa:141

F6SUA6              	100.00%		I3LTY3              	100.00%
                    	       		F1SV82              	7.77%
Bootstrap support for F6SUA6 as seed ortholog is 99%.
Bootstrap support for I3LTY3 as seed ortholog is 99%.

Group of orthologs #1536. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 S.scrofa:375

F7BJM0              	100.00%		I3LHP5              	100.00%
                    	       		F1RPC2              	24.75%
Bootstrap support for F7BJM0 as seed ortholog is 100%.
Bootstrap support for I3LHP5 as seed ortholog is 100%.

Group of orthologs #1537. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 S.scrofa:435

F6R3M6              	100.00%		F1RN59              	100.00%
Bootstrap support for F6R3M6 as seed ortholog is 100%.
Bootstrap support for F1RN59 as seed ortholog is 100%.

Group of orthologs #1538. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 S.scrofa:435

F6XSG2              	100.00%		F1S0P7              	100.00%
Bootstrap support for F6XSG2 as seed ortholog is 100%.
Bootstrap support for F1S0P7 as seed ortholog is 100%.

Group of orthologs #1539. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 S.scrofa:435

F6Q096              	100.00%		F2Z567              	100.00%
Bootstrap support for F6Q096 as seed ortholog is 100%.
Bootstrap support for F2Z567 as seed ortholog is 100%.

Group of orthologs #1540. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 S.scrofa:314

F6Z8G0              	100.00%		F1S774              	100.00%
Bootstrap support for F6Z8G0 as seed ortholog is 100%.
Bootstrap support for F1S774 as seed ortholog is 100%.

Group of orthologs #1541. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 S.scrofa:313

F6ZU35              	100.00%		F1S811              	100.00%
Bootstrap support for F6ZU35 as seed ortholog is 100%.
Bootstrap support for F1S811 as seed ortholog is 100%.

Group of orthologs #1542. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 S.scrofa:435

F6W1Y5              	100.00%		I3LEF8              	100.00%
Bootstrap support for F6W1Y5 as seed ortholog is 100%.
Bootstrap support for I3LEF8 as seed ortholog is 100%.

Group of orthologs #1543. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 S.scrofa:212

H2XNP4              	100.00%		K7GNV6              	100.00%
Bootstrap support for H2XNP4 as seed ortholog is 100%.
Bootstrap support for K7GNV6 as seed ortholog is 100%.

Group of orthologs #1544. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 S.scrofa:434

F6XKA8              	100.00%		F1S2F8              	100.00%
Bootstrap support for F6XKA8 as seed ortholog is 100%.
Bootstrap support for F1S2F8 as seed ortholog is 100%.

Group of orthologs #1545. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.scrofa:177

F6QUA3              	100.00%		F1SDX6              	100.00%
                    	       		F1SI57              	9.44%
                    	       		F1SI56              	9.13%
Bootstrap support for F6QUA3 as seed ortholog is 96%.
Bootstrap support for F1SDX6 as seed ortholog is 99%.

Group of orthologs #1546. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 S.scrofa:433

F7AA24              	100.00%		I3LFZ6              	100.00%
                    	       		F1SV18              	8.61%
Bootstrap support for F7AA24 as seed ortholog is 100%.
Bootstrap support for I3LFZ6 as seed ortholog is 100%.

Group of orthologs #1547. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 S.scrofa:433

F6REI3              	100.00%		F1S3M3              	100.00%
Bootstrap support for F6REI3 as seed ortholog is 100%.
Bootstrap support for F1S3M3 as seed ortholog is 100%.

Group of orthologs #1548. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.scrofa:433

F7A5Y1              	100.00%		F1S762              	100.00%
Bootstrap support for F7A5Y1 as seed ortholog is 99%.
Bootstrap support for F1S762 as seed ortholog is 100%.

Group of orthologs #1549. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 S.scrofa:65

F6UT38              	100.00%		F1SUU8              	100.00%
Bootstrap support for F6UT38 as seed ortholog is 100%.
Bootstrap support for F1SUU8 as seed ortholog is 96%.

Group of orthologs #1550. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 S.scrofa:340

F6SP32              	100.00%		I3LQS7              	100.00%
Bootstrap support for F6SP32 as seed ortholog is 100%.
Bootstrap support for I3LQS7 as seed ortholog is 100%.

Group of orthologs #1551. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 S.scrofa:433

F6Y0T9              	100.00%		I3LSQ7              	100.00%
Bootstrap support for F6Y0T9 as seed ortholog is 100%.
Bootstrap support for I3LSQ7 as seed ortholog is 100%.

Group of orthologs #1552. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.scrofa:66

F6TA22              	100.00%		I3LHA1              	100.00%
                    	       		F1SGW8              	25.08%
                    	       		F1SPP6              	10.62%
                    	       		F1SGX8              	5.54%
Bootstrap support for F6TA22 as seed ortholog is 91%.
Bootstrap support for I3LHA1 as seed ortholog is 92%.

Group of orthologs #1553. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 S.scrofa:432

F6TLP7              	100.00%		F1SFJ9              	100.00%
Bootstrap support for F6TLP7 as seed ortholog is 100%.
Bootstrap support for F1SFJ9 as seed ortholog is 100%.

Group of orthologs #1554. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 S.scrofa:432

H2XQJ0              	100.00%		F1S7Z8              	100.00%
Bootstrap support for H2XQJ0 as seed ortholog is 100%.
Bootstrap support for F1S7Z8 as seed ortholog is 100%.

Group of orthologs #1555. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 S.scrofa:432

H2XL83              	100.00%		F1SGD9              	100.00%
Bootstrap support for H2XL83 as seed ortholog is 100%.
Bootstrap support for F1SGD9 as seed ortholog is 100%.

Group of orthologs #1556. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 S.scrofa:431

H2Y181              	100.00%		F1S7B2              	100.00%
F6RRT5              	15.63%		I3LKR4              	66.76%
Bootstrap support for H2Y181 as seed ortholog is 100%.
Bootstrap support for F1S7B2 as seed ortholog is 100%.

Group of orthologs #1557. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 S.scrofa:431

F6Y9G9              	100.00%		F1SUU6              	100.00%
F7ADG5              	55.38%		
Bootstrap support for F6Y9G9 as seed ortholog is 100%.
Bootstrap support for F1SUU6 as seed ortholog is 100%.

Group of orthologs #1558. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 S.scrofa:356

F6TZ34              	100.00%		A5A761              	100.00%
Bootstrap support for F6TZ34 as seed ortholog is 100%.
Bootstrap support for A5A761 as seed ortholog is 100%.

Group of orthologs #1559. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 S.scrofa:431

F6TWQ7              	100.00%		F1S0T1              	100.00%
Bootstrap support for F6TWQ7 as seed ortholog is 100%.
Bootstrap support for F1S0T1 as seed ortholog is 100%.

Group of orthologs #1560. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 S.scrofa:431

F6Y7P7              	100.00%		I3LKI5              	100.00%
Bootstrap support for F6Y7P7 as seed ortholog is 100%.
Bootstrap support for I3LKI5 as seed ortholog is 100%.

Group of orthologs #1561. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 S.scrofa:430

H2XVU4              	100.00%		F1SM79              	100.00%
H2XSC1              	13.59%		
H2XZ95              	11.36%		
H2XP11              	10.37%		
Bootstrap support for H2XVU4 as seed ortholog is 100%.
Bootstrap support for F1SM79 as seed ortholog is 100%.

Group of orthologs #1562. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 S.scrofa:430

F6UJ45              	100.00%		F1S563              	100.00%
Bootstrap support for F6UJ45 as seed ortholog is 100%.
Bootstrap support for F1S563 as seed ortholog is 100%.

Group of orthologs #1563. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 S.scrofa:430

F6QE47              	100.00%		F1SJT9              	100.00%
Bootstrap support for F6QE47 as seed ortholog is 100%.
Bootstrap support for F1SJT9 as seed ortholog is 100%.

Group of orthologs #1564. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.scrofa:430

F6SZ94              	100.00%		F1STV0              	100.00%
Bootstrap support for F6SZ94 as seed ortholog is 99%.
Bootstrap support for F1STV0 as seed ortholog is 100%.

Group of orthologs #1565. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 S.scrofa:430

F7AE51              	100.00%		F1SDD7              	100.00%
Bootstrap support for F7AE51 as seed ortholog is 100%.
Bootstrap support for F1SDD7 as seed ortholog is 100%.

Group of orthologs #1566. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 S.scrofa:430

F6ZTX9              	100.00%		I3LA93              	100.00%
Bootstrap support for F6ZTX9 as seed ortholog is 100%.
Bootstrap support for I3LA93 as seed ortholog is 100%.

Group of orthologs #1567. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 S.scrofa:281

F6WYV6              	100.00%		F1RFN9              	100.00%
                    	       		I3LKF3              	94.29%
                    	       		I3LDW3              	23.53%
Bootstrap support for F6WYV6 as seed ortholog is 100%.
Bootstrap support for F1RFN9 as seed ortholog is 100%.

Group of orthologs #1568. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 S.scrofa:130

F7AX33              	100.00%		F1SKA2              	100.00%
                    	       		F1RNI1              	15.78%
Bootstrap support for F7AX33 as seed ortholog is 100%.
Bootstrap support for F1SKA2 as seed ortholog is 99%.

Group of orthologs #1569. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 S.scrofa:236

H2Y3K9              	100.00%		P11708              	100.00%
                    	       		I3LBY9              	45.41%
Bootstrap support for H2Y3K9 as seed ortholog is 100%.
Bootstrap support for P11708 as seed ortholog is 100%.

Group of orthologs #1570. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 S.scrofa:195

F6X4N7              	100.00%		F1RM25              	100.00%
Bootstrap support for F6X4N7 as seed ortholog is 100%.
Bootstrap support for F1RM25 as seed ortholog is 100%.

Group of orthologs #1571. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 S.scrofa:429

F6X9G1              	100.00%		F1RVY7              	100.00%
Bootstrap support for F6X9G1 as seed ortholog is 100%.
Bootstrap support for F1RVY7 as seed ortholog is 100%.

Group of orthologs #1572. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 S.scrofa:315

H2XPX9              	100.00%		D7RA32              	100.00%
Bootstrap support for H2XPX9 as seed ortholog is 100%.
Bootstrap support for D7RA32 as seed ortholog is 100%.

Group of orthologs #1573. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 S.scrofa:429

F6ZNA8              	100.00%		F1S6U8              	100.00%
Bootstrap support for F6ZNA8 as seed ortholog is 100%.
Bootstrap support for F1S6U8 as seed ortholog is 100%.

Group of orthologs #1574. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 S.scrofa:165

F6W1D2              	100.00%		I3LEM5              	100.00%
Bootstrap support for F6W1D2 as seed ortholog is 100%.
Bootstrap support for I3LEM5 as seed ortholog is 100%.

Group of orthologs #1575. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 S.scrofa:259

F7BL16              	100.00%		F1SMF7              	100.00%
Bootstrap support for F7BL16 as seed ortholog is 100%.
Bootstrap support for F1SMF7 as seed ortholog is 100%.

Group of orthologs #1576. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 S.scrofa:428

F6TQT4              	100.00%		F1SN47              	100.00%
                    	       		F1SLB4              	47.74%
Bootstrap support for F6TQT4 as seed ortholog is 100%.
Bootstrap support for F1SN47 as seed ortholog is 100%.

Group of orthologs #1577. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 S.scrofa:83

H2Y0H5              	100.00%		P00795              	100.00%
F6V8V5              	14.13%		
Bootstrap support for H2Y0H5 as seed ortholog is 100%.
Bootstrap support for P00795 as seed ortholog is 97%.

Group of orthologs #1578. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 S.scrofa:428

F7BKM3              	100.00%		F1RJI2              	100.00%
Bootstrap support for F7BKM3 as seed ortholog is 100%.
Bootstrap support for F1RJI2 as seed ortholog is 100%.

Group of orthologs #1579. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 S.scrofa:427

F6S8I5              	100.00%		F1RJQ7              	100.00%
                    	       		F1S0R5              	27.66%
                    	       		F1SI18              	6.16%
Bootstrap support for F6S8I5 as seed ortholog is 100%.
Bootstrap support for F1RJQ7 as seed ortholog is 100%.

Group of orthologs #1580. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 S.scrofa:93

H2XM50              	100.00%		I3LKA2              	100.00%
Bootstrap support for H2XM50 as seed ortholog is 100%.
Bootstrap support for I3LKA2 as seed ortholog is 99%.

Group of orthologs #1581. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 S.scrofa:365

F6YFM8              	100.00%		F1RFH5              	100.00%
                    	       		F1RGP3              	5.83%
Bootstrap support for F6YFM8 as seed ortholog is 100%.
Bootstrap support for F1RFH5 as seed ortholog is 100%.

Group of orthologs #1582. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 S.scrofa:426

F6QAQ0              	100.00%		A5A779              	100.00%
Bootstrap support for F6QAQ0 as seed ortholog is 100%.
Bootstrap support for A5A779 as seed ortholog is 100%.

Group of orthologs #1583. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.scrofa:106

F6RD62              	100.00%		F1RV20              	100.00%
Bootstrap support for F6RD62 as seed ortholog is 99%.
Bootstrap support for F1RV20 as seed ortholog is 99%.

Group of orthologs #1584. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 S.scrofa:341

F6VSD5              	100.00%		F1RJL0              	100.00%
Bootstrap support for F6VSD5 as seed ortholog is 100%.
Bootstrap support for F1RJL0 as seed ortholog is 100%.

Group of orthologs #1585. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 S.scrofa:426

H2XPV2              	100.00%		F1RJU1              	100.00%
Bootstrap support for H2XPV2 as seed ortholog is 100%.
Bootstrap support for F1RJU1 as seed ortholog is 100%.

Group of orthologs #1586. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 S.scrofa:426

F7B6S1              	100.00%		F1RXX4              	100.00%
Bootstrap support for F7B6S1 as seed ortholog is 100%.
Bootstrap support for F1RXX4 as seed ortholog is 100%.

Group of orthologs #1587. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 S.scrofa:425

F6QXK6              	100.00%		F1SH49              	100.00%
Bootstrap support for F6QXK6 as seed ortholog is 100%.
Bootstrap support for F1SH49 as seed ortholog is 100%.

Group of orthologs #1588. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 S.scrofa:425

F6X600              	100.00%		F1S365              	100.00%
Bootstrap support for F6X600 as seed ortholog is 100%.
Bootstrap support for F1S365 as seed ortholog is 100%.

Group of orthologs #1589. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 S.scrofa:425

F7A9G9              	100.00%		F1SGN1              	100.00%
Bootstrap support for F7A9G9 as seed ortholog is 100%.
Bootstrap support for F1SGN1 as seed ortholog is 100%.

Group of orthologs #1590. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 S.scrofa:32

H2XQN8              	100.00%		F1SJP9              	100.00%
Bootstrap support for H2XQN8 as seed ortholog is 100%.
Bootstrap support for F1SJP9 as seed ortholog is 71%.
Alternative seed ortholog is I3LQE0 (32 bits away from this cluster)

Group of orthologs #1591. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 S.scrofa:304

F7AFR6              	100.00%		I3LLG4              	100.00%
Bootstrap support for F7AFR6 as seed ortholog is 100%.
Bootstrap support for I3LLG4 as seed ortholog is 100%.

Group of orthologs #1592. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.scrofa:156

F7AGU6              	100.00%		F1RGN9              	100.00%
Bootstrap support for F7AGU6 as seed ortholog is 99%.
Bootstrap support for F1RGN9 as seed ortholog is 100%.

Group of orthologs #1593. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 S.scrofa:424

F6VWH1              	100.00%		F1SFQ3              	100.00%
Bootstrap support for F6VWH1 as seed ortholog is 61%.
Alternative seed ortholog is F7AK22 (13 bits away from this cluster)
Bootstrap support for F1SFQ3 as seed ortholog is 100%.

Group of orthologs #1594. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 S.scrofa:424

F6VG31              	100.00%		I3LLW7              	100.00%
Bootstrap support for F6VG31 as seed ortholog is 100%.
Bootstrap support for I3LLW7 as seed ortholog is 100%.

Group of orthologs #1595. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 S.scrofa:423

F7AHE5              	100.00%		I3LL74              	100.00%
                    	       		I3L8H6              	41.75%
                    	       		I3L774              	13.95%
                    	       		I3LQ92              	6.30%
Bootstrap support for F7AHE5 as seed ortholog is 100%.
Bootstrap support for I3LL74 as seed ortholog is 100%.

Group of orthologs #1596. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 S.scrofa:423

F6VI40              	100.00%		F1RXX5              	100.00%
                    	       		F1RRD8              	32.92%
                    	       		F1RWL0              	13.63%
Bootstrap support for F6VI40 as seed ortholog is 100%.
Bootstrap support for F1RXX5 as seed ortholog is 100%.

Group of orthologs #1597. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.scrofa:65

F6Z9D3              	100.00%		F1SQF8              	100.00%
                    	       		F1S2A7              	6.93%
Bootstrap support for F6Z9D3 as seed ortholog is 100%.
Bootstrap support for F1SQF8 as seed ortholog is 98%.

Group of orthologs #1598. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 S.scrofa:423

F6V6R4              	100.00%		B6CVD7              	100.00%
Bootstrap support for F6V6R4 as seed ortholog is 100%.
Bootstrap support for B6CVD7 as seed ortholog is 100%.

Group of orthologs #1599. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 S.scrofa:423

F6T0X5              	100.00%		F1S1V8              	100.00%
Bootstrap support for F6T0X5 as seed ortholog is 100%.
Bootstrap support for F1S1V8 as seed ortholog is 100%.

Group of orthologs #1600. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:166

F7ANS1              	100.00%		F1RQG9              	100.00%
Bootstrap support for F7ANS1 as seed ortholog is 96%.
Bootstrap support for F1RQG9 as seed ortholog is 99%.

Group of orthologs #1601. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 S.scrofa:59

F6TAR1              	100.00%		F1SJJ3              	100.00%
Bootstrap support for F6TAR1 as seed ortholog is 100%.
Bootstrap support for F1SJJ3 as seed ortholog is 90%.

Group of orthologs #1602. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 S.scrofa:423

F6U2U3              	100.00%		I3LJ73              	100.00%
Bootstrap support for F6U2U3 as seed ortholog is 100%.
Bootstrap support for I3LJ73 as seed ortholog is 100%.

Group of orthologs #1603. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 S.scrofa:423

F6SSK4              	100.00%		P17560              	100.00%
Bootstrap support for F6SSK4 as seed ortholog is 100%.
Bootstrap support for P17560 as seed ortholog is 100%.

Group of orthologs #1604. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 S.scrofa:150

F7B4P3              	100.00%		F1RF12              	100.00%
                    	       		I3LVR0              	19.08%
Bootstrap support for F7B4P3 as seed ortholog is 100%.
Bootstrap support for F1RF12 as seed ortholog is 99%.

Group of orthologs #1605. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 S.scrofa:325

F6U7M8              	100.00%		I3LBS2              	100.00%
                    	       		F1RLE6              	9.25%
Bootstrap support for F6U7M8 as seed ortholog is 100%.
Bootstrap support for I3LBS2 as seed ortholog is 100%.

Group of orthologs #1606. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 S.scrofa:193

F7APJ4              	100.00%		F1SPJ9              	100.00%
                    	       		F1SQP7              	39.84%
Bootstrap support for F7APJ4 as seed ortholog is 100%.
Bootstrap support for F1SPJ9 as seed ortholog is 100%.

Group of orthologs #1607. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 S.scrofa:422

F6PMY2              	100.00%		F1S3U0              	100.00%
Bootstrap support for F6PMY2 as seed ortholog is 100%.
Bootstrap support for F1S3U0 as seed ortholog is 100%.

Group of orthologs #1608. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 S.scrofa:422

F6YUA5              	100.00%		F1RGP6              	100.00%
Bootstrap support for F6YUA5 as seed ortholog is 100%.
Bootstrap support for F1RGP6 as seed ortholog is 100%.

Group of orthologs #1609. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 S.scrofa:422

F6XHE4              	100.00%		F1RMD8              	100.00%
Bootstrap support for F6XHE4 as seed ortholog is 100%.
Bootstrap support for F1RMD8 as seed ortholog is 100%.

Group of orthologs #1610. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 S.scrofa:422

F7A1S8              	100.00%		A5GFZ6              	100.00%
Bootstrap support for F7A1S8 as seed ortholog is 100%.
Bootstrap support for A5GFZ6 as seed ortholog is 100%.

Group of orthologs #1611. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 S.scrofa:422

F6X7W0              	100.00%		F1S297              	100.00%
Bootstrap support for F6X7W0 as seed ortholog is 100%.
Bootstrap support for F1S297 as seed ortholog is 100%.

Group of orthologs #1612. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:273

F7AKB5              	100.00%		F1SJ29              	100.00%
Bootstrap support for F7AKB5 as seed ortholog is 100%.
Bootstrap support for F1SJ29 as seed ortholog is 100%.

Group of orthologs #1613. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:365

F6PK80              	100.00%		F1RIZ5              	100.00%
Bootstrap support for F6PK80 as seed ortholog is 99%.
Bootstrap support for F1RIZ5 as seed ortholog is 100%.

Group of orthologs #1614. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 S.scrofa:421

F6WBA4              	100.00%		F1SAH5              	100.00%
Bootstrap support for F6WBA4 as seed ortholog is 100%.
Bootstrap support for F1SAH5 as seed ortholog is 100%.

Group of orthologs #1615. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 S.scrofa:203

F7B1U4              	100.00%		F1SF39              	100.00%
Bootstrap support for F7B1U4 as seed ortholog is 100%.
Bootstrap support for F1SF39 as seed ortholog is 100%.

Group of orthologs #1616. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 S.scrofa:294

H2XR98              	100.00%		F1S2U5              	100.00%
Bootstrap support for H2XR98 as seed ortholog is 100%.
Bootstrap support for F1S2U5 as seed ortholog is 100%.

Group of orthologs #1617. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:91

F6VZQ1              	100.00%		I3LVF1              	100.00%
Bootstrap support for F6VZQ1 as seed ortholog is 99%.
Bootstrap support for I3LVF1 as seed ortholog is 99%.

Group of orthologs #1618. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 S.scrofa:171

F6ZVC8              	100.00%		I3LTH4              	100.00%
Bootstrap support for F6ZVC8 as seed ortholog is 100%.
Bootstrap support for I3LTH4 as seed ortholog is 100%.

Group of orthologs #1619. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 S.scrofa:420

F7B623              	100.00%		D5K8A2              	100.00%
Bootstrap support for F7B623 as seed ortholog is 100%.
Bootstrap support for D5K8A2 as seed ortholog is 100%.

Group of orthologs #1620. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 S.scrofa:420

F7ATS3              	100.00%		F1RXV0              	100.00%
Bootstrap support for F7ATS3 as seed ortholog is 100%.
Bootstrap support for F1RXV0 as seed ortholog is 100%.

Group of orthologs #1621. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 S.scrofa:420

H2XY38              	100.00%		F1RS44              	100.00%
Bootstrap support for H2XY38 as seed ortholog is 100%.
Bootstrap support for F1RS44 as seed ortholog is 100%.

Group of orthologs #1622. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 S.scrofa:420

H2XLM3              	100.00%		F1SFF3              	100.00%
Bootstrap support for H2XLM3 as seed ortholog is 100%.
Bootstrap support for F1SFF3 as seed ortholog is 100%.

Group of orthologs #1623. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:420

F6YNQ3              	100.00%		I3L8X0              	100.00%
Bootstrap support for F6YNQ3 as seed ortholog is 100%.
Bootstrap support for I3L8X0 as seed ortholog is 100%.

Group of orthologs #1624. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 S.scrofa:193

H2Y395              	100.00%		Q719N1              	100.00%
Bootstrap support for H2Y395 as seed ortholog is 100%.
Bootstrap support for Q719N1 as seed ortholog is 100%.

Group of orthologs #1625. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 S.scrofa:164

H2Y1T5              	100.00%		F1S2P9              	100.00%
                    	       		F1SA88              	29.11%
                    	       		F1RQP2              	10.20%
Bootstrap support for H2Y1T5 as seed ortholog is 100%.
Bootstrap support for F1S2P9 as seed ortholog is 99%.

Group of orthologs #1626. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 S.scrofa:419

F6VDW8              	100.00%		G8ENM4              	100.00%
                    	       		F1SGA0              	40.61%
Bootstrap support for F6VDW8 as seed ortholog is 100%.
Bootstrap support for G8ENM4 as seed ortholog is 100%.

Group of orthologs #1627. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 S.scrofa:326

F6WYW5              	100.00%		E1CAJ5              	100.00%
Bootstrap support for F6WYW5 as seed ortholog is 100%.
Bootstrap support for E1CAJ5 as seed ortholog is 100%.

Group of orthologs #1628. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 S.scrofa:419

F7ASJ4              	100.00%		F1SLS7              	100.00%
Bootstrap support for F7ASJ4 as seed ortholog is 100%.
Bootstrap support for F1SLS7 as seed ortholog is 100%.

Group of orthologs #1629. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 S.scrofa:419

F6YA95              	100.00%		I3LGL1              	100.00%
Bootstrap support for F6YA95 as seed ortholog is 100%.
Bootstrap support for I3LGL1 as seed ortholog is 100%.

Group of orthologs #1630. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 S.scrofa:237

F6YGL5              	100.00%		I3LPH6              	100.00%
Bootstrap support for F6YGL5 as seed ortholog is 100%.
Bootstrap support for I3LPH6 as seed ortholog is 100%.

Group of orthologs #1631. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 S.scrofa:419

Q7YZS7              	100.00%		F1SG35              	100.00%
Bootstrap support for Q7YZS7 as seed ortholog is 100%.
Bootstrap support for F1SG35 as seed ortholog is 100%.

Group of orthologs #1632. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 S.scrofa:418

F6T7E5              	100.00%		F1STI8              	100.00%
                    	       		F1RT20              	33.28%
                    	       		I3LRB8              	17.83%
                    	       		F1SV77              	7.98%
Bootstrap support for F6T7E5 as seed ortholog is 100%.
Bootstrap support for F1STI8 as seed ortholog is 100%.

Group of orthologs #1633. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 S.scrofa:173

F6Q909              	100.00%		F1RQE2              	100.00%
                    	       		F1S535              	29.35%
                    	       		F1SCM9              	22.32%
Bootstrap support for F6Q909 as seed ortholog is 100%.
Bootstrap support for F1RQE2 as seed ortholog is 99%.

Group of orthologs #1634. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 S.scrofa:119

F6TEZ1              	100.00%		F1REX9              	100.00%
Bootstrap support for F6TEZ1 as seed ortholog is 100%.
Bootstrap support for F1REX9 as seed ortholog is 99%.

Group of orthologs #1635. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 S.scrofa:39

F6WFL4              	100.00%		F1S1V5              	100.00%
Bootstrap support for F6WFL4 as seed ortholog is 100%.
Bootstrap support for F1S1V5 as seed ortholog is 84%.

Group of orthologs #1636. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 S.scrofa:418

H2Y323              	100.00%		F1RIG2              	100.00%
Bootstrap support for H2Y323 as seed ortholog is 100%.
Bootstrap support for F1RIG2 as seed ortholog is 100%.

Group of orthologs #1637. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 S.scrofa:418

F7ATT1              	100.00%		F1SFI3              	100.00%
Bootstrap support for F7ATT1 as seed ortholog is 100%.
Bootstrap support for F1SFI3 as seed ortholog is 100%.

Group of orthologs #1638. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 S.scrofa:418

F6U9L3              	100.00%		I3LF82              	100.00%
Bootstrap support for F6U9L3 as seed ortholog is 100%.
Bootstrap support for I3LF82 as seed ortholog is 100%.

Group of orthologs #1639. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 S.scrofa:418

F6UJM5              	100.00%		I3LN44              	100.00%
Bootstrap support for F6UJM5 as seed ortholog is 100%.
Bootstrap support for I3LN44 as seed ortholog is 100%.

Group of orthologs #1640. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 S.scrofa:240

F6Q558              	100.00%		Q684M6              	100.00%
Bootstrap support for F6Q558 as seed ortholog is 100%.
Bootstrap support for Q684M6 as seed ortholog is 100%.

Group of orthologs #1641. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 S.scrofa:418

F6YHB0              	100.00%		I3LFK0              	100.00%
Bootstrap support for F6YHB0 as seed ortholog is 100%.
Bootstrap support for I3LFK0 as seed ortholog is 100%.

Group of orthologs #1642. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.scrofa:181

F7ATZ1              	100.00%		I3LBV9              	100.00%
Bootstrap support for F7ATZ1 as seed ortholog is 100%.
Bootstrap support for I3LBV9 as seed ortholog is 99%.

Group of orthologs #1643. Best score 417 bits
Score difference with first non-orthologous sequence - C.intestinalis:417 S.scrofa:417

H2Y1J2              	100.00%		I3LJ31              	100.00%
Bootstrap support for H2Y1J2 as seed ortholog is 100%.
Bootstrap support for I3LJ31 as seed ortholog is 100%.

Group of orthologs #1644. Best score 417 bits
Score difference with first non-orthologous sequence - C.intestinalis:417 S.scrofa:417

Q967X2              	100.00%		P67872              	100.00%
Bootstrap support for Q967X2 as seed ortholog is 100%.
Bootstrap support for P67872 as seed ortholog is 100%.

Group of orthologs #1645. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 S.scrofa:30

F6PKL1              	100.00%		C6K7I2              	100.00%
Bootstrap support for F6PKL1 as seed ortholog is 100%.
Bootstrap support for C6K7I2 as seed ortholog is 78%.

Group of orthologs #1646. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 S.scrofa:287

F6U959              	100.00%		F1RTS7              	100.00%
Bootstrap support for F6U959 as seed ortholog is 100%.
Bootstrap support for F1RTS7 as seed ortholog is 100%.

Group of orthologs #1647. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 S.scrofa:293

F6Y403              	100.00%		F1SC70              	100.00%
Bootstrap support for F6Y403 as seed ortholog is 94%.
Bootstrap support for F1SC70 as seed ortholog is 100%.

Group of orthologs #1648. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 S.scrofa:416

H2XPZ1              	100.00%		F1S7R4              	100.00%
Bootstrap support for H2XPZ1 as seed ortholog is 100%.
Bootstrap support for F1S7R4 as seed ortholog is 100%.

Group of orthologs #1649. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 S.scrofa:416

H2Y2E8              	100.00%		I3LAL7              	100.00%
Bootstrap support for H2Y2E8 as seed ortholog is 100%.
Bootstrap support for I3LAL7 as seed ortholog is 100%.

Group of orthologs #1650. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 S.scrofa:415

F6YW80              	100.00%		F1SMR1              	100.00%
                    	       		F1S4R7              	10.99%
                    	       		F1S6F8              	10.60%
Bootstrap support for F6YW80 as seed ortholog is 100%.
Bootstrap support for F1SMR1 as seed ortholog is 100%.

Group of orthologs #1651. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 S.scrofa:415

H2Y3R2              	100.00%		I3LIX6              	100.00%
                    	       		F1RGC7              	99.22%
Bootstrap support for H2Y3R2 as seed ortholog is 100%.
Bootstrap support for I3LIX6 as seed ortholog is 100%.

Group of orthologs #1652. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 S.scrofa:415

F6X0L7              	100.00%		F1RHU1              	100.00%
Bootstrap support for F6X0L7 as seed ortholog is 100%.
Bootstrap support for F1RHU1 as seed ortholog is 100%.

Group of orthologs #1653. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.scrofa:415

F6T9L2              	100.00%		F1SFP5              	100.00%
Bootstrap support for F6T9L2 as seed ortholog is 100%.
Bootstrap support for F1SFP5 as seed ortholog is 100%.

Group of orthologs #1654. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 S.scrofa:99

F6YG13              	100.00%		F1RR71              	100.00%
                    	       		I3LPL5              	50.39%
                    	       		F1SR89              	44.36%
                    	       		I3L720              	36.96%
                    	       		I3LIV9              	23.35%
                    	       		F1RR70              	20.23%
Bootstrap support for F6YG13 as seed ortholog is 100%.
Bootstrap support for F1RR71 as seed ortholog is 92%.

Group of orthologs #1655. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 S.scrofa:58

F6X3V2              	100.00%		F1SJ74              	100.00%
                    	       		I3LSE8              	90.60%
                    	       		F1SLP9              	11.13%
Bootstrap support for F6X3V2 as seed ortholog is 100%.
Bootstrap support for F1SJ74 as seed ortholog is 90%.

Group of orthologs #1656. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:414

F7BEC5              	100.00%		F1SF76              	100.00%
                    	       		F1RTS6              	23.75%
                    	       		F1RRT9              	8.39%
Bootstrap support for F7BEC5 as seed ortholog is 99%.
Bootstrap support for F1SF76 as seed ortholog is 100%.

Group of orthologs #1657. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 S.scrofa:414

F6YEQ8              	100.00%		F1SJN5              	100.00%
Bootstrap support for F6YEQ8 as seed ortholog is 100%.
Bootstrap support for F1SJN5 as seed ortholog is 100%.

Group of orthologs #1658. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 S.scrofa:414

F6Q0S7              	100.00%		I3LKI8              	100.00%
Bootstrap support for F6Q0S7 as seed ortholog is 100%.
Bootstrap support for I3LKI8 as seed ortholog is 100%.

Group of orthologs #1659. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 S.scrofa:414

F7AL38              	100.00%		F1SFE1              	100.00%
Bootstrap support for F7AL38 as seed ortholog is 100%.
Bootstrap support for F1SFE1 as seed ortholog is 100%.

Group of orthologs #1660. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 S.scrofa:414

F7AF81              	100.00%		F1SIF8              	100.00%
Bootstrap support for F7AF81 as seed ortholog is 100%.
Bootstrap support for F1SIF8 as seed ortholog is 100%.

Group of orthologs #1661. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 S.scrofa:414

F6YRS8              	100.00%		F1SSD2              	100.00%
Bootstrap support for F6YRS8 as seed ortholog is 100%.
Bootstrap support for F1SSD2 as seed ortholog is 100%.

Group of orthologs #1662. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 S.scrofa:319

F6WWW4              	100.00%		I3LPF4              	100.00%
Bootstrap support for F6WWW4 as seed ortholog is 100%.
Bootstrap support for I3LPF4 as seed ortholog is 100%.

Group of orthologs #1663. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:34

F7A0P0              	100.00%		A5GFW1              	100.00%
                    	       		I3LUZ0              	48.04%
Bootstrap support for F7A0P0 as seed ortholog is 100%.
Bootstrap support for A5GFW1 as seed ortholog is 88%.

Group of orthologs #1664. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 S.scrofa:413

F6SHZ7              	100.00%		A0PFK7              	100.00%
Bootstrap support for F6SHZ7 as seed ortholog is 100%.
Bootstrap support for A0PFK7 as seed ortholog is 100%.

Group of orthologs #1665. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 S.scrofa:146

F6U7S8              	100.00%		F1RIK0              	100.00%
Bootstrap support for F6U7S8 as seed ortholog is 99%.
Bootstrap support for F1RIK0 as seed ortholog is 99%.

Group of orthologs #1666. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 S.scrofa:413

F6X3C5              	100.00%		F1S666              	100.00%
Bootstrap support for F6X3C5 as seed ortholog is 100%.
Bootstrap support for F1S666 as seed ortholog is 100%.

Group of orthologs #1667. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 S.scrofa:413

H2XUV6              	100.00%		F1RG46              	100.00%
Bootstrap support for H2XUV6 as seed ortholog is 100%.
Bootstrap support for F1RG46 as seed ortholog is 100%.

Group of orthologs #1668. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.scrofa:191

F6Z0T1              	100.00%		F1S7T4              	100.00%
Bootstrap support for F6Z0T1 as seed ortholog is 100%.
Bootstrap support for F1S7T4 as seed ortholog is 100%.

Group of orthologs #1669. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 S.scrofa:413

F6TNU2              	100.00%		F1SQY2              	100.00%
Bootstrap support for F6TNU2 as seed ortholog is 100%.
Bootstrap support for F1SQY2 as seed ortholog is 100%.

Group of orthologs #1670. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 S.scrofa:412

F6TJS2              	100.00%		B6EAV6              	100.00%
Bootstrap support for F6TJS2 as seed ortholog is 100%.
Bootstrap support for B6EAV6 as seed ortholog is 100%.

Group of orthologs #1671. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 S.scrofa:412

F6Y1T4              	100.00%		F1RY42              	100.00%
Bootstrap support for F6Y1T4 as seed ortholog is 100%.
Bootstrap support for F1RY42 as seed ortholog is 100%.

Group of orthologs #1672. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.scrofa:114

F6PN33              	100.00%		K7GR59              	100.00%
                    	       		F1S1L0              	34.37%
                    	       		I3LR35              	22.95%
                    	       		F1SQT2              	21.06%
                    	       		I3LU00              	15.41%
Bootstrap support for F6PN33 as seed ortholog is 99%.
Bootstrap support for K7GR59 as seed ortholog is 99%.

Group of orthologs #1673. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 S.scrofa:411

F6QQ49              	100.00%		F1RRK9              	100.00%
                    	       		F1SIU3              	66.05%
Bootstrap support for F6QQ49 as seed ortholog is 100%.
Bootstrap support for F1RRK9 as seed ortholog is 100%.

Group of orthologs #1674. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 S.scrofa:143

F6Y836              	100.00%		Q4TU03              	100.00%
                    	       		F1RH38              	26.82%
Bootstrap support for F6Y836 as seed ortholog is 100%.
Bootstrap support for Q4TU03 as seed ortholog is 99%.

Group of orthologs #1675. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:185

Q4H358              	100.00%		I3LCS8              	100.00%
                    	       		F1RJ29              	34.28%
Bootstrap support for Q4H358 as seed ortholog is 100%.
Bootstrap support for I3LCS8 as seed ortholog is 100%.

Group of orthologs #1676. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 S.scrofa:411

Q8HIN5              	100.00%		Q1HBG9              	100.00%
                    	       		P24964              	99.46%
Bootstrap support for Q8HIN5 as seed ortholog is 100%.
Bootstrap support for Q1HBG9 as seed ortholog is 100%.

Group of orthologs #1677. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 S.scrofa:343

F6TIU3              	100.00%		F1SV90              	100.00%
Bootstrap support for F6TIU3 as seed ortholog is 100%.
Bootstrap support for F1SV90 as seed ortholog is 100%.

Group of orthologs #1678. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 S.scrofa:329

F6XKQ1              	100.00%		F1SIH5              	100.00%
Bootstrap support for F6XKQ1 as seed ortholog is 100%.
Bootstrap support for F1SIH5 as seed ortholog is 100%.

Group of orthologs #1679. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 S.scrofa:411

F6PPC0              	100.00%		Q29387              	100.00%
Bootstrap support for F6PPC0 as seed ortholog is 100%.
Bootstrap support for Q29387 as seed ortholog is 100%.

Group of orthologs #1680. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 S.scrofa:411

H2XUA5              	100.00%		I3LQY2              	100.00%
Bootstrap support for H2XUA5 as seed ortholog is 100%.
Bootstrap support for I3LQY2 as seed ortholog is 100%.

Group of orthologs #1681. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 S.scrofa:356

F6UAP7              	100.00%		F1S0P4              	100.00%
Bootstrap support for F6UAP7 as seed ortholog is 100%.
Bootstrap support for F1S0P4 as seed ortholog is 100%.

Group of orthologs #1682. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 S.scrofa:77

F6U4Y0              	100.00%		F1S6Q3              	100.00%
Bootstrap support for F6U4Y0 as seed ortholog is 100%.
Bootstrap support for F1S6Q3 as seed ortholog is 91%.

Group of orthologs #1683. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 S.scrofa:410

F6VII3              	100.00%		F1SC66              	100.00%
Bootstrap support for F6VII3 as seed ortholog is 100%.
Bootstrap support for F1SC66 as seed ortholog is 100%.

Group of orthologs #1684. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 S.scrofa:410

H2XJZ5              	100.00%		F1SB46              	100.00%
Bootstrap support for H2XJZ5 as seed ortholog is 100%.
Bootstrap support for F1SB46 as seed ortholog is 100%.

Group of orthologs #1685. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 S.scrofa:410

F6UCU4              	100.00%		Q8MIR0              	100.00%
Bootstrap support for F6UCU4 as seed ortholog is 100%.
Bootstrap support for Q8MIR0 as seed ortholog is 100%.

Group of orthologs #1686. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:246

F6TZR8              	100.00%		F1RYK1              	100.00%
                    	       		F1S5A0              	44.37%
                    	       		I3LR36              	15.54%
Bootstrap support for F6TZR8 as seed ortholog is 99%.
Bootstrap support for F1RYK1 as seed ortholog is 100%.

Group of orthologs #1687. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:351

F6QMU4              	100.00%		F1SNK9              	100.00%
                    	       		F1SA16              	39.25%
                    	       		D3K5N7              	16.50%
Bootstrap support for F6QMU4 as seed ortholog is 100%.
Bootstrap support for F1SNK9 as seed ortholog is 100%.

Group of orthologs #1688. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 S.scrofa:267

F6RRI2              	100.00%		F1RW22              	100.00%
                    	       		F1RTR5              	55.95%
Bootstrap support for F6RRI2 as seed ortholog is 100%.
Bootstrap support for F1RW22 as seed ortholog is 100%.

Group of orthologs #1689. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 S.scrofa:409

F6RDQ7              	100.00%		F1RRP3              	100.00%
Bootstrap support for F6RDQ7 as seed ortholog is 100%.
Bootstrap support for F1RRP3 as seed ortholog is 100%.

Group of orthologs #1690. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 S.scrofa:105

F6YUB3              	100.00%		F1S1U5              	100.00%
Bootstrap support for F6YUB3 as seed ortholog is 100%.
Bootstrap support for F1S1U5 as seed ortholog is 99%.

Group of orthologs #1691. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 S.scrofa:292

F6Q9M9              	100.00%		F1RSC3              	100.00%
Bootstrap support for F6Q9M9 as seed ortholog is 100%.
Bootstrap support for F1RSC3 as seed ortholog is 100%.

Group of orthologs #1692. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 S.scrofa:408

F6UGT8              	100.00%		F1S3H2              	100.00%
Bootstrap support for F6UGT8 as seed ortholog is 100%.
Bootstrap support for F1S3H2 as seed ortholog is 100%.

Group of orthologs #1693. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 S.scrofa:311

F6VNH8              	100.00%		F1S861              	100.00%
Bootstrap support for F6VNH8 as seed ortholog is 100%.
Bootstrap support for F1S861 as seed ortholog is 100%.

Group of orthologs #1694. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 S.scrofa:180

H2XNK3              	100.00%		F1REW5              	100.00%
Bootstrap support for H2XNK3 as seed ortholog is 100%.
Bootstrap support for F1REW5 as seed ortholog is 99%.

Group of orthologs #1695. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 S.scrofa:408

F6R4Z1              	100.00%		F2Z5H1              	100.00%
Bootstrap support for F6R4Z1 as seed ortholog is 100%.
Bootstrap support for F2Z5H1 as seed ortholog is 100%.

Group of orthologs #1696. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 S.scrofa:408

F6QS20              	100.00%		Q32YV9              	100.00%
Bootstrap support for F6QS20 as seed ortholog is 100%.
Bootstrap support for Q32YV9 as seed ortholog is 100%.

Group of orthologs #1697. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 S.scrofa:53

H2XQX1              	100.00%		F1RL89              	100.00%
                    	       		F1SC79              	54.88%
Bootstrap support for H2XQX1 as seed ortholog is 100%.
Bootstrap support for F1RL89 as seed ortholog is 81%.

Group of orthologs #1698. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 S.scrofa:407

F7BA39              	100.00%		F1S9W6              	100.00%
                    	       		F1S6G0              	23.32%
Bootstrap support for F7BA39 as seed ortholog is 100%.
Bootstrap support for F1S9W6 as seed ortholog is 100%.

Group of orthologs #1699. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 S.scrofa:344

Q1RL49              	100.00%		F1RM50              	100.00%
Bootstrap support for Q1RL49 as seed ortholog is 100%.
Bootstrap support for F1RM50 as seed ortholog is 100%.

Group of orthologs #1700. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 S.scrofa:407

F6REB5              	100.00%		I3LPJ7              	100.00%
Bootstrap support for F6REB5 as seed ortholog is 100%.
Bootstrap support for I3LPJ7 as seed ortholog is 100%.

Group of orthologs #1701. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 S.scrofa:407

H2XK75              	100.00%		F1SQZ8              	100.00%
Bootstrap support for H2XK75 as seed ortholog is 100%.
Bootstrap support for F1SQZ8 as seed ortholog is 100%.

Group of orthologs #1702. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 S.scrofa:232

F7AAW0              	100.00%		I3LEP1              	100.00%
Bootstrap support for F7AAW0 as seed ortholog is 100%.
Bootstrap support for I3LEP1 as seed ortholog is 100%.

Group of orthologs #1703. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 S.scrofa:310

H2XQR8              	100.00%		I3LL82              	100.00%
Bootstrap support for H2XQR8 as seed ortholog is 100%.
Bootstrap support for I3LL82 as seed ortholog is 100%.

Group of orthologs #1704. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 S.scrofa:185

Q6XZ10              	100.00%		Q19KI0              	100.00%
Q6XZ09              	75.20%		Q95M75              	27.36%
                    	       		F1RPZ7              	10.19%
Bootstrap support for Q6XZ10 as seed ortholog is 75%.
Bootstrap support for Q19KI0 as seed ortholog is 100%.

Group of orthologs #1705. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 S.scrofa:33

F6Z4F9              	100.00%		F1SV79              	100.00%
                    	       		F1RVL4              	42.73%
Bootstrap support for F6Z4F9 as seed ortholog is 100%.
Bootstrap support for F1SV79 as seed ortholog is 61%.
Alternative seed ortholog is K7GKE8 (33 bits away from this cluster)

Group of orthologs #1706. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 S.scrofa:406

F6UMM5              	100.00%		F1RGC9              	100.00%
Bootstrap support for F6UMM5 as seed ortholog is 100%.
Bootstrap support for F1RGC9 as seed ortholog is 100%.

Group of orthologs #1707. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 S.scrofa:215

F6Z8S6              	100.00%		F1RTB6              	100.00%
Bootstrap support for F6Z8S6 as seed ortholog is 100%.
Bootstrap support for F1RTB6 as seed ortholog is 100%.

Group of orthologs #1708. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 S.scrofa:406

F6WAN9              	100.00%		F1SC00              	100.00%
Bootstrap support for F6WAN9 as seed ortholog is 100%.
Bootstrap support for F1SC00 as seed ortholog is 100%.

Group of orthologs #1709. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 S.scrofa:406

F6SGF7              	100.00%		F2Z591              	100.00%
Bootstrap support for F6SGF7 as seed ortholog is 100%.
Bootstrap support for F2Z591 as seed ortholog is 100%.

Group of orthologs #1710. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 S.scrofa:406

F6R589              	100.00%		I3L813              	100.00%
Bootstrap support for F6R589 as seed ortholog is 100%.
Bootstrap support for I3L813 as seed ortholog is 100%.

Group of orthologs #1711. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 S.scrofa:406

F6Z1E3              	100.00%		F2Z5C7              	100.00%
Bootstrap support for F6Z1E3 as seed ortholog is 100%.
Bootstrap support for F2Z5C7 as seed ortholog is 100%.

Group of orthologs #1712. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.scrofa:104

F6YG66              	100.00%		I3LEY2              	100.00%
Bootstrap support for F6YG66 as seed ortholog is 99%.
Bootstrap support for I3LEY2 as seed ortholog is 89%.

Group of orthologs #1713. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 S.scrofa:406

F6XUX1              	100.00%		I3LKW2              	100.00%
Bootstrap support for F6XUX1 as seed ortholog is 100%.
Bootstrap support for I3LKW2 as seed ortholog is 100%.

Group of orthologs #1714. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 S.scrofa:30

F6V4L6              	100.00%		I3LS24              	100.00%
                    	       		F1STS9              	85.41%
Bootstrap support for F6V4L6 as seed ortholog is 100%.
Bootstrap support for I3LS24 as seed ortholog is 62%.
Alternative seed ortholog is F1RQM6 (30 bits away from this cluster)

Group of orthologs #1715. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 S.scrofa:405

F6XDT3              	100.00%		F1S2G5              	100.00%
Bootstrap support for F6XDT3 as seed ortholog is 100%.
Bootstrap support for F1S2G5 as seed ortholog is 100%.

Group of orthologs #1716. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 S.scrofa:405

H2XYQ2              	100.00%		F1RG04              	100.00%
Bootstrap support for H2XYQ2 as seed ortholog is 100%.
Bootstrap support for F1RG04 as seed ortholog is 100%.

Group of orthologs #1717. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 S.scrofa:405

F7AZ43              	100.00%		F1SBB2              	100.00%
Bootstrap support for F7AZ43 as seed ortholog is 100%.
Bootstrap support for F1SBB2 as seed ortholog is 100%.

Group of orthologs #1718. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 S.scrofa:405

H2Y1L9              	100.00%		F1RV32              	100.00%
Bootstrap support for H2Y1L9 as seed ortholog is 100%.
Bootstrap support for F1RV32 as seed ortholog is 100%.

Group of orthologs #1719. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 S.scrofa:405

F6PW19              	100.00%		I3LUK0              	100.00%
Bootstrap support for F6PW19 as seed ortholog is 100%.
Bootstrap support for I3LUK0 as seed ortholog is 100%.

Group of orthologs #1720. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 S.scrofa:289

F7ALM5              	100.00%		I3LNC5              	100.00%
Bootstrap support for F7ALM5 as seed ortholog is 100%.
Bootstrap support for I3LNC5 as seed ortholog is 100%.

Group of orthologs #1721. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 S.scrofa:405

F7A0D6              	100.00%		P79381              	100.00%
Bootstrap support for F7A0D6 as seed ortholog is 100%.
Bootstrap support for P79381 as seed ortholog is 100%.

Group of orthologs #1722. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 S.scrofa:405

Q1RL29              	100.00%		I3LDH3              	100.00%
Bootstrap support for Q1RL29 as seed ortholog is 100%.
Bootstrap support for I3LDH3 as seed ortholog is 100%.

Group of orthologs #1723. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 S.scrofa:404

F6Q041              	100.00%		F1RWT2              	100.00%
                    	       		F1RK02              	71.36%
                    	       		F1SKF1              	47.69%
Bootstrap support for F6Q041 as seed ortholog is 100%.
Bootstrap support for F1RWT2 as seed ortholog is 100%.

Group of orthologs #1724. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 S.scrofa:336

F6VFZ2              	100.00%		F1SSI1              	100.00%
                    	       		F1S5K0              	48.83%
Bootstrap support for F6VFZ2 as seed ortholog is 100%.
Bootstrap support for F1SSI1 as seed ortholog is 100%.

Group of orthologs #1725. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 S.scrofa:404

F6UXC7              	100.00%		F1RL26              	100.00%
Bootstrap support for F6UXC7 as seed ortholog is 100%.
Bootstrap support for F1RL26 as seed ortholog is 100%.

Group of orthologs #1726. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 S.scrofa:404

F6U936              	100.00%		F1RPP3              	100.00%
Bootstrap support for F6U936 as seed ortholog is 100%.
Bootstrap support for F1RPP3 as seed ortholog is 100%.

Group of orthologs #1727. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 S.scrofa:149

F6PT55              	100.00%		F1SFL4              	100.00%
Bootstrap support for F6PT55 as seed ortholog is 100%.
Bootstrap support for F1SFL4 as seed ortholog is 99%.

Group of orthologs #1728. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 S.scrofa:404

F7B4X6              	100.00%		F1S7E0              	100.00%
Bootstrap support for F7B4X6 as seed ortholog is 100%.
Bootstrap support for F1S7E0 as seed ortholog is 100%.

Group of orthologs #1729. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 S.scrofa:404

Q67EQ6              	100.00%		F1RUA4              	100.00%
Bootstrap support for Q67EQ6 as seed ortholog is 100%.
Bootstrap support for F1RUA4 as seed ortholog is 100%.

Group of orthologs #1730. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 S.scrofa:404

F7BF26              	100.00%		F1SSF8              	100.00%
Bootstrap support for F7BF26 as seed ortholog is 100%.
Bootstrap support for F1SSF8 as seed ortholog is 100%.

Group of orthologs #1731. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 S.scrofa:404

F6U9X5              	100.00%		I3LVI8              	100.00%
Bootstrap support for F6U9X5 as seed ortholog is 100%.
Bootstrap support for I3LVI8 as seed ortholog is 100%.

Group of orthologs #1732. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 S.scrofa:65

F7AI88              	100.00%		I3LH62              	100.00%
                    	       		F1ST39              	43.76%
Bootstrap support for F7AI88 as seed ortholog is 100%.
Bootstrap support for I3LH62 as seed ortholog is 95%.

Group of orthologs #1733. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 S.scrofa:403

H2XP89              	100.00%		I3LPV0              	100.00%
                    	       		F1S9G4              	17.87%
Bootstrap support for H2XP89 as seed ortholog is 100%.
Bootstrap support for I3LPV0 as seed ortholog is 100%.

Group of orthologs #1734. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 S.scrofa:403

F6ZYB8              	100.00%		F1RMN6              	100.00%
Bootstrap support for F6ZYB8 as seed ortholog is 82%.
Bootstrap support for F1RMN6 as seed ortholog is 100%.

Group of orthologs #1735. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 S.scrofa:302

F6TLE7              	100.00%		I3L643              	100.00%
Bootstrap support for F6TLE7 as seed ortholog is 100%.
Bootstrap support for I3L643 as seed ortholog is 100%.

Group of orthologs #1736. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 S.scrofa:317

F6TLL4              	100.00%		I3LPB8              	100.00%
Bootstrap support for F6TLL4 as seed ortholog is 100%.
Bootstrap support for I3LPB8 as seed ortholog is 100%.

Group of orthologs #1737. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:402 S.scrofa:231

Q1RLH6              	100.00%		F1S3M5              	100.00%
Bootstrap support for Q1RLH6 as seed ortholog is 100%.
Bootstrap support for F1S3M5 as seed ortholog is 100%.

Group of orthologs #1738. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 S.scrofa:401

F6VPX3              	100.00%		F1SE37              	100.00%
                    	       		F1RW11              	39.27%
Bootstrap support for F6VPX3 as seed ortholog is 100%.
Bootstrap support for F1SE37 as seed ortholog is 100%.

Group of orthologs #1739. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:285

F6X159              	100.00%		K7GNK7              	100.00%
                    	       		I3LAV2              	54.77%
Bootstrap support for F6X159 as seed ortholog is 100%.
Bootstrap support for K7GNK7 as seed ortholog is 100%.

Group of orthologs #1740. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 S.scrofa:401

H2XMQ8              	100.00%		K7GR66              	100.00%
                    	       		F1S9E9              	48.36%
Bootstrap support for H2XMQ8 as seed ortholog is 100%.
Bootstrap support for K7GR66 as seed ortholog is 100%.

Group of orthologs #1741. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 S.scrofa:401

F6QB35              	100.00%		F1SM67              	100.00%
Bootstrap support for F6QB35 as seed ortholog is 100%.
Bootstrap support for F1SM67 as seed ortholog is 100%.

Group of orthologs #1742. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 S.scrofa:401

F7B503              	100.00%		F1S0H7              	100.00%
Bootstrap support for F7B503 as seed ortholog is 100%.
Bootstrap support for F1S0H7 as seed ortholog is 100%.

Group of orthologs #1743. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 S.scrofa:401

F6VYK8              	100.00%		F1SQX4              	100.00%
Bootstrap support for F6VYK8 as seed ortholog is 100%.
Bootstrap support for F1SQX4 as seed ortholog is 100%.

Group of orthologs #1744. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 S.scrofa:303

F6VEB2              	100.00%		F1SU35              	100.00%
Bootstrap support for F6VEB2 as seed ortholog is 100%.
Bootstrap support for F1SU35 as seed ortholog is 100%.

Group of orthologs #1745. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.scrofa:354

F6PNT4              	100.00%		P37111              	100.00%
Bootstrap support for F6PNT4 as seed ortholog is 99%.
Bootstrap support for P37111 as seed ortholog is 100%.

Group of orthologs #1746. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 S.scrofa:30

F7BDV2              	100.00%		F1SUG3              	100.00%
Bootstrap support for F7BDV2 as seed ortholog is 100%.
Bootstrap support for F1SUG3 as seed ortholog is 86%.

Group of orthologs #1747. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 S.scrofa:321

F7A6C5              	100.00%		I3LEG2              	100.00%
Bootstrap support for F7A6C5 as seed ortholog is 100%.
Bootstrap support for I3LEG2 as seed ortholog is 100%.

Group of orthologs #1748. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 S.scrofa:401

F6ZS04              	100.00%		I3LLG1              	100.00%
Bootstrap support for F6ZS04 as seed ortholog is 100%.
Bootstrap support for I3LLG1 as seed ortholog is 100%.

Group of orthologs #1749. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 S.scrofa:400

F6PQN7              	100.00%		K7GL42              	100.00%
                    	       		F1SQG3              	8.43%
Bootstrap support for F6PQN7 as seed ortholog is 100%.
Bootstrap support for K7GL42 as seed ortholog is 100%.

Group of orthologs #1750. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 S.scrofa:400

F6QCQ5              	100.00%		F1RR63              	100.00%
Bootstrap support for F6QCQ5 as seed ortholog is 100%.
Bootstrap support for F1RR63 as seed ortholog is 100%.

Group of orthologs #1751. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 S.scrofa:400

F6V9X6              	100.00%		F1RRB0              	100.00%
Bootstrap support for F6V9X6 as seed ortholog is 100%.
Bootstrap support for F1RRB0 as seed ortholog is 100%.

Group of orthologs #1752. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 S.scrofa:400

F6SSM8              	100.00%		F1SJJ5              	100.00%
Bootstrap support for F6SSM8 as seed ortholog is 100%.
Bootstrap support for F1SJJ5 as seed ortholog is 100%.

Group of orthologs #1753. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 S.scrofa:289

H2XPM6              	100.00%		F1RKU4              	100.00%
Bootstrap support for H2XPM6 as seed ortholog is 100%.
Bootstrap support for F1RKU4 as seed ortholog is 100%.

Group of orthologs #1754. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 S.scrofa:111

F6S4U2              	100.00%		K7GPE3              	100.00%
Bootstrap support for F6S4U2 as seed ortholog is 100%.
Bootstrap support for K7GPE3 as seed ortholog is 99%.

Group of orthologs #1755. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 S.scrofa:400

F7BP62              	100.00%		I3LVA5              	100.00%
Bootstrap support for F7BP62 as seed ortholog is 100%.
Bootstrap support for I3LVA5 as seed ortholog is 100%.

Group of orthologs #1756. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 S.scrofa:399

F6T5M6              	100.00%		F1S474              	100.00%
Bootstrap support for F6T5M6 as seed ortholog is 100%.
Bootstrap support for F1S474 as seed ortholog is 100%.

Group of orthologs #1757. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 S.scrofa:399

F6R999              	100.00%		F1S9W3              	100.00%
Bootstrap support for F6R999 as seed ortholog is 100%.
Bootstrap support for F1S9W3 as seed ortholog is 100%.

Group of orthologs #1758. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 S.scrofa:332

H2XX49              	100.00%		A5GFR1              	100.00%
Bootstrap support for H2XX49 as seed ortholog is 100%.
Bootstrap support for A5GFR1 as seed ortholog is 100%.

Group of orthologs #1759. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 S.scrofa:398

F7AJJ2              	100.00%		I3LK97              	100.00%
F6TUF1              	21.06%		K7GLM8              	7.53%
F6PWZ1              	14.20%		
F6ZVR9              	13.43%		
Bootstrap support for F7AJJ2 as seed ortholog is 65%.
Alternative seed ortholog is H2Y1L6 (48 bits away from this cluster)
Bootstrap support for I3LK97 as seed ortholog is 100%.

Group of orthologs #1760. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 S.scrofa:398

F6XEX3              	100.00%		Q9TUI8              	100.00%
F6XEW4              	16.12%		
Bootstrap support for F6XEX3 as seed ortholog is 100%.
Bootstrap support for Q9TUI8 as seed ortholog is 100%.

Group of orthologs #1761. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 S.scrofa:398

F6Q8G4              	100.00%		F1SES5              	100.00%
Bootstrap support for F6Q8G4 as seed ortholog is 100%.
Bootstrap support for F1SES5 as seed ortholog is 100%.

Group of orthologs #1762. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 S.scrofa:398

F6YY79              	100.00%		F1RRU0              	100.00%
Bootstrap support for F6YY79 as seed ortholog is 100%.
Bootstrap support for F1RRU0 as seed ortholog is 100%.

Group of orthologs #1763. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 S.scrofa:398

F7ASH4              	100.00%		F1SEH8              	100.00%
Bootstrap support for F7ASH4 as seed ortholog is 100%.
Bootstrap support for F1SEH8 as seed ortholog is 100%.

Group of orthologs #1764. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 S.scrofa:398

H2XPN9              	100.00%		F1S4Q6              	100.00%
Bootstrap support for H2XPN9 as seed ortholog is 100%.
Bootstrap support for F1S4Q6 as seed ortholog is 100%.

Group of orthologs #1765. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 S.scrofa:398

F7B5B2              	100.00%		F1SJ30              	100.00%
Bootstrap support for F7B5B2 as seed ortholog is 100%.
Bootstrap support for F1SJ30 as seed ortholog is 100%.

Group of orthologs #1766. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 S.scrofa:398

H2Y088              	100.00%		F1S2H8              	100.00%
Bootstrap support for H2Y088 as seed ortholog is 100%.
Bootstrap support for F1S2H8 as seed ortholog is 100%.

Group of orthologs #1767. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 S.scrofa:78

F6T8Y3              	100.00%		I3LTT3              	100.00%
Bootstrap support for F6T8Y3 as seed ortholog is 100%.
Bootstrap support for I3LTT3 as seed ortholog is 97%.

Group of orthologs #1768. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 S.scrofa:398

F6TXT5              	100.00%		Q0Z8U2              	100.00%
Bootstrap support for F6TXT5 as seed ortholog is 100%.
Bootstrap support for Q0Z8U2 as seed ortholog is 100%.

Group of orthologs #1769. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 S.scrofa:398

H2Y1M1              	100.00%		I3LJ86              	100.00%
Bootstrap support for H2Y1M1 as seed ortholog is 100%.
Bootstrap support for I3LJ86 as seed ortholog is 100%.

Group of orthologs #1770. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 S.scrofa:294

F6VH85              	100.00%		F1SJR5              	100.00%
                    	       		I3LJ82              	38.82%
                    	       		F1SIC0              	14.45%
Bootstrap support for F6VH85 as seed ortholog is 100%.
Bootstrap support for F1SJR5 as seed ortholog is 100%.

Group of orthologs #1771. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 S.scrofa:397

F6RMR3              	100.00%		F1S5H4              	100.00%
Bootstrap support for F6RMR3 as seed ortholog is 100%.
Bootstrap support for F1S5H4 as seed ortholog is 100%.

Group of orthologs #1772. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 S.scrofa:73

F6T0J5              	100.00%		F1SBA5              	100.00%
Bootstrap support for F6T0J5 as seed ortholog is 100%.
Bootstrap support for F1SBA5 as seed ortholog is 99%.

Group of orthologs #1773. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 S.scrofa:397

H2XWR9              	100.00%		I3LDY5              	100.00%
Bootstrap support for H2XWR9 as seed ortholog is 100%.
Bootstrap support for I3LDY5 as seed ortholog is 100%.

Group of orthologs #1774. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 S.scrofa:165

F6RBW8              	100.00%		F1RGW0              	100.00%
Bootstrap support for F6RBW8 as seed ortholog is 100%.
Bootstrap support for F1RGW0 as seed ortholog is 99%.

Group of orthologs #1775. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 S.scrofa:396

F6YSX7              	100.00%		F1RRJ4              	100.00%
Bootstrap support for F6YSX7 as seed ortholog is 100%.
Bootstrap support for F1RRJ4 as seed ortholog is 100%.

Group of orthologs #1776. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 S.scrofa:396

F6YIR3              	100.00%		F1RWL6              	100.00%
Bootstrap support for F6YIR3 as seed ortholog is 100%.
Bootstrap support for F1RWL6 as seed ortholog is 100%.

Group of orthologs #1777. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 S.scrofa:396

F6VW40              	100.00%		F6Q1K6              	100.00%
Bootstrap support for F6VW40 as seed ortholog is 100%.
Bootstrap support for F6Q1K6 as seed ortholog is 100%.

Group of orthologs #1778. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 S.scrofa:396

F6WNN3              	100.00%		I3LVD6              	100.00%
Bootstrap support for F6WNN3 as seed ortholog is 100%.
Bootstrap support for I3LVD6 as seed ortholog is 100%.

Group of orthologs #1779. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 S.scrofa:98

F6YBW0              	100.00%		F1SII0              	100.00%
                    	       		F1S9T0              	16.14%
                    	       		F1SCF5              	10.90%
Bootstrap support for F6YBW0 as seed ortholog is 100%.
Bootstrap support for F1SII0 as seed ortholog is 99%.

Group of orthologs #1780. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 S.scrofa:395

F6VXA3              	100.00%		F1RXV2              	100.00%
Bootstrap support for F6VXA3 as seed ortholog is 100%.
Bootstrap support for F1RXV2 as seed ortholog is 100%.

Group of orthologs #1781. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.scrofa:47

F6RID1              	100.00%		F1S9Z9              	100.00%
F6Z1A5              	9.13%		I3LHS9              	46.41%
                    	       		I3LBC2              	25.18%
                    	       		I3LF61              	19.97%
Bootstrap support for F6RID1 as seed ortholog is 94%.
Bootstrap support for F1S9Z9 as seed ortholog is 86%.

Group of orthologs #1782. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 S.scrofa:310

F6YR71              	100.00%		F1SK86              	100.00%
                    	       		F1RYY0              	23.50%
Bootstrap support for F6YR71 as seed ortholog is 100%.
Bootstrap support for F1SK86 as seed ortholog is 100%.

Group of orthologs #1783. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 S.scrofa:394

F6VLB7              	100.00%		F1RHJ9              	100.00%
Bootstrap support for F6VLB7 as seed ortholog is 100%.
Bootstrap support for F1RHJ9 as seed ortholog is 100%.

Group of orthologs #1784. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 S.scrofa:394

F6ZRT4              	100.00%		F1SIH4              	100.00%
Bootstrap support for F6ZRT4 as seed ortholog is 100%.
Bootstrap support for F1SIH4 as seed ortholog is 100%.

Group of orthologs #1785. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 S.scrofa:394

H2XVC3              	100.00%		F1SEE2              	100.00%
Bootstrap support for H2XVC3 as seed ortholog is 100%.
Bootstrap support for F1SEE2 as seed ortholog is 100%.

Group of orthologs #1786. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 S.scrofa:227

F6ZVH3              	100.00%		F1SUK6              	100.00%
                    	       		F1RWU4              	20.87%
Bootstrap support for F6ZVH3 as seed ortholog is 100%.
Bootstrap support for F1SUK6 as seed ortholog is 99%.

Group of orthologs #1787. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.scrofa:393

H2XZF9              	100.00%		I3L9C5              	100.00%
                    	       		F1SH30              	23.57%
Bootstrap support for H2XZF9 as seed ortholog is 100%.
Bootstrap support for I3L9C5 as seed ortholog is 100%.

Group of orthologs #1788. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 S.scrofa:393

F6WZ68              	100.00%		F1SIM2              	100.00%
Bootstrap support for F6WZ68 as seed ortholog is 100%.
Bootstrap support for F1SIM2 as seed ortholog is 100%.

Group of orthologs #1789. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 S.scrofa:393

F6ZG25              	100.00%		F1SQJ5              	100.00%
Bootstrap support for F6ZG25 as seed ortholog is 100%.
Bootstrap support for F1SQJ5 as seed ortholog is 100%.

Group of orthologs #1790. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 S.scrofa:295

F6XX66              	100.00%		I3LG02              	100.00%
Bootstrap support for F6XX66 as seed ortholog is 100%.
Bootstrap support for I3LG02 as seed ortholog is 100%.

Group of orthologs #1791. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 S.scrofa:393

F6ZX12              	100.00%		Q007T0              	100.00%
Bootstrap support for F6ZX12 as seed ortholog is 100%.
Bootstrap support for Q007T0 as seed ortholog is 100%.

Group of orthologs #1792. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:140

Q9U6V0              	100.00%		I3L959              	100.00%
Bootstrap support for Q9U6V0 as seed ortholog is 100%.
Bootstrap support for I3L959 as seed ortholog is 99%.

Group of orthologs #1793. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 S.scrofa:86

F6XQI0              	100.00%		O02670              	100.00%
                    	       		F1RJW4              	29.00%
                    	       		F1SGV4              	22.94%
                    	       		F1RQH0              	12.99%
Bootstrap support for F6XQI0 as seed ortholog is 100%.
Bootstrap support for O02670 as seed ortholog is 99%.

Group of orthologs #1794. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 S.scrofa:392

F6TW46              	100.00%		F1RJH9              	100.00%
                    	       		F1RG69              	25.83%
Bootstrap support for F6TW46 as seed ortholog is 100%.
Bootstrap support for F1RJH9 as seed ortholog is 100%.

Group of orthologs #1795. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 S.scrofa:285

F6PR16              	100.00%		F1SLF2              	100.00%
                    	       		I3LE89              	9.49%
Bootstrap support for F6PR16 as seed ortholog is 100%.
Bootstrap support for F1SLF2 as seed ortholog is 100%.

Group of orthologs #1796. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 S.scrofa:392

F6PRY2              	100.00%		F1S7Q8              	100.00%
Bootstrap support for F6PRY2 as seed ortholog is 100%.
Bootstrap support for F1S7Q8 as seed ortholog is 100%.

Group of orthologs #1797. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 S.scrofa:392

F6VBG8              	100.00%		F1RT46              	100.00%
Bootstrap support for F6VBG8 as seed ortholog is 100%.
Bootstrap support for F1RT46 as seed ortholog is 100%.

Group of orthologs #1798. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 S.scrofa:392

F6UMH6              	100.00%		F1S5J7              	100.00%
Bootstrap support for F6UMH6 as seed ortholog is 100%.
Bootstrap support for F1S5J7 as seed ortholog is 100%.

Group of orthologs #1799. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 S.scrofa:392

F6ZJ39              	100.00%		F1SD67              	100.00%
Bootstrap support for F6ZJ39 as seed ortholog is 100%.
Bootstrap support for F1SD67 as seed ortholog is 100%.

Group of orthologs #1800. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 S.scrofa:307

F6V899              	100.00%		D0G7F3              	100.00%
                    	       		I3LUB3              	17.93%
Bootstrap support for F6V899 as seed ortholog is 100%.
Bootstrap support for D0G7F3 as seed ortholog is 100%.

Group of orthologs #1801. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 S.scrofa:33

F6RBM9              	100.00%		I3LIR7              	100.00%
F6T5A7              	68.46%		
Bootstrap support for F6RBM9 as seed ortholog is 82%.
Bootstrap support for I3LIR7 as seed ortholog is 77%.

Group of orthologs #1802. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 S.scrofa:391

F6YIX5              	100.00%		F1SGT3              	100.00%
Bootstrap support for F6YIX5 as seed ortholog is 100%.
Bootstrap support for F1SGT3 as seed ortholog is 100%.

Group of orthologs #1803. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 S.scrofa:391

F6YIJ5              	100.00%		I3LNP0              	100.00%
Bootstrap support for F6YIJ5 as seed ortholog is 100%.
Bootstrap support for I3LNP0 as seed ortholog is 100%.

Group of orthologs #1804. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 S.scrofa:91

F6QHN7              	100.00%		O18839              	100.00%
                    	       		J9JIN1              	85.92%
                    	       		F1SKP8              	27.52%
                    	       		F1RL84              	23.95%
Bootstrap support for F6QHN7 as seed ortholog is 100%.
Bootstrap support for O18839 as seed ortholog is 99%.

Group of orthologs #1805. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 S.scrofa:390

H2XSN3              	100.00%		F1RZW6              	100.00%
                    	       		I3LIL5              	18.18%
Bootstrap support for H2XSN3 as seed ortholog is 100%.
Bootstrap support for F1RZW6 as seed ortholog is 100%.

Group of orthologs #1806. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 S.scrofa:390

F6QXQ1              	100.00%		Q02110              	100.00%
F6PPW9              	15.77%		
Bootstrap support for F6QXQ1 as seed ortholog is 100%.
Bootstrap support for Q02110 as seed ortholog is 100%.

Group of orthologs #1807. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 S.scrofa:304

F6V779              	100.00%		F1RQ47              	100.00%
Bootstrap support for F6V779 as seed ortholog is 100%.
Bootstrap support for F1RQ47 as seed ortholog is 100%.

Group of orthologs #1808. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.scrofa:219

F6QMD4              	100.00%		F1SMG7              	100.00%
Bootstrap support for F6QMD4 as seed ortholog is 100%.
Bootstrap support for F1SMG7 as seed ortholog is 100%.

Group of orthologs #1809. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 S.scrofa:390

F7B2R9              	100.00%		F1SAB4              	100.00%
Bootstrap support for F7B2R9 as seed ortholog is 100%.
Bootstrap support for F1SAB4 as seed ortholog is 100%.

Group of orthologs #1810. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 S.scrofa:390

H2XT72              	100.00%		F1S9P4              	100.00%
Bootstrap support for H2XT72 as seed ortholog is 100%.
Bootstrap support for F1S9P4 as seed ortholog is 100%.

Group of orthologs #1811. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 S.scrofa:389

F6SSW4              	100.00%		F1RS43              	100.00%
Bootstrap support for F6SSW4 as seed ortholog is 100%.
Bootstrap support for F1RS43 as seed ortholog is 100%.

Group of orthologs #1812. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 S.scrofa:337

H2XZE5              	100.00%		B6CVL4              	100.00%
Bootstrap support for H2XZE5 as seed ortholog is 100%.
Bootstrap support for B6CVL4 as seed ortholog is 100%.

Group of orthologs #1813. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 S.scrofa:389

F6YJ84              	100.00%		F1STK7              	100.00%
Bootstrap support for F6YJ84 as seed ortholog is 100%.
Bootstrap support for F1STK7 as seed ortholog is 100%.

Group of orthologs #1814. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 S.scrofa:389

H2XMX2              	100.00%		F1SD35              	100.00%
Bootstrap support for H2XMX2 as seed ortholog is 100%.
Bootstrap support for F1SD35 as seed ortholog is 100%.

Group of orthologs #1815. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 S.scrofa:389

F6WPY5              	100.00%		O46560              	100.00%
Bootstrap support for F6WPY5 as seed ortholog is 100%.
Bootstrap support for O46560 as seed ortholog is 100%.

Group of orthologs #1816. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 S.scrofa:222

F6VMY2              	100.00%		Q52NJ6              	100.00%
Bootstrap support for F6VMY2 as seed ortholog is 100%.
Bootstrap support for Q52NJ6 as seed ortholog is 100%.

Group of orthologs #1817. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 S.scrofa:240

H2XUE3              	100.00%		I3LAB6              	100.00%
Bootstrap support for H2XUE3 as seed ortholog is 100%.
Bootstrap support for I3LAB6 as seed ortholog is 100%.

Group of orthologs #1818. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:52

F6W0H5              	100.00%		I3LEB8              	100.00%
                    	       		F1RPL4              	35.51%
                    	       		I3LNL2              	35.02%
                    	       		F1SC17              	33.85%
                    	       		F1SU62              	30.83%
                    	       		F1RKN0              	29.66%
                    	       		F1RJG5              	27.90%
                    	       		F1RKM8              	27.80%
                    	       		F1RKN1              	27.61%
                    	       		I3LPD3              	27.51%
                    	       		F1RI76              	26.93%
                    	       		F1RMT4              	26.93%
                    	       		I3LDU7              	26.73%
                    	       		I3LSS6              	25.37%
                    	       		F1RKM7              	25.17%
                    	       		F1RHD5              	25.17%
                    	       		F1RKP8              	25.07%
                    	       		F1RG25              	24.98%
                    	       		F1SCQ1              	24.49%
                    	       		F1SC26              	24.20%
                    	       		F1SAJ6              	24.20%
                    	       		F1RZZ7              	24.00%
                    	       		F1RI74              	23.51%
                    	       		I3LTP2              	23.41%
                    	       		I3L5E8              	23.32%
                    	       		F1RNL1              	22.83%
                    	       		I3LMM2              	22.63%
                    	       		F1SRB3              	22.05%
                    	       		F1RW59              	21.95%
                    	       		I3LL99              	21.76%
                    	       		F1SDE5              	21.56%
                    	       		F1RMV0              	21.56%
                    	       		F1RNL0              	21.37%
                    	       		F1RIW0              	21.27%
                    	       		F1S3C9              	21.07%
                    	       		F1RV38              	21.07%
                    	       		F1SEY6              	20.68%
                    	       		F1RLB8              	20.59%
                    	       		F1RMU9              	20.00%
                    	       		I3LHH7              	19.71%
                    	       		F1RP82              	19.61%
                    	       		F1RWD7              	19.61%
                    	       		F1RW58              	19.51%
                    	       		F1SCQ0              	19.51%
                    	       		F1RMU8              	19.41%
                    	       		F1SEY4              	19.32%
                    	       		F1RH10              	19.22%
                    	       		F1S2L9              	19.12%
                    	       		F1RLC2              	18.93%
                    	       		I3L8W7              	18.93%
                    	       		I3LAW2              	18.83%
                    	       		F1S9G1              	18.54%
                    	       		F1SUF7              	18.54%
                    	       		F1SRB1              	18.44%
                    	       		F1RWE8              	18.34%
                    	       		F1SCQ3              	18.24%
                    	       		I3L8J9              	18.15%
                    	       		I3L7Q6              	17.56%
                    	       		I3LBM2              	17.37%
                    	       		I3L8Q6              	17.17%
                    	       		F1RW60              	16.98%
                    	       		I3L6L1              	16.88%
                    	       		F1RGL4              	16.78%
                    	       		F1RG79              	16.39%
                    	       		I3LQC7              	16.00%
                    	       		I3LA17              	15.90%
                    	       		F1RH54              	15.80%
                    	       		F1RLD5              	15.41%
                    	       		F1RMT3              	15.32%
                    	       		F1SBH6              	15.22%
                    	       		F1REX0              	15.02%
                    	       		I3LBM3              	14.93%
                    	       		I3LBE9              	14.73%
                    	       		I3LMG7              	14.73%
                    	       		F1RP89              	14.34%
                    	       		F1SN91              	14.24%
                    	       		I3LME5              	14.24%
                    	       		I3L7Q0              	14.15%
                    	       		I3LA72              	14.05%
                    	       		I3LU48              	13.85%
                    	       		I3LQ98              	13.76%
                    	       		F1RLD6              	13.56%
                    	       		I3LHB1              	13.27%
                    	       		F1S428              	13.27%
                    	       		I3LAN2              	13.07%
                    	       		F1RFY7              	12.88%
                    	       		I3LDZ4              	12.78%
                    	       		F1SCQ4              	12.68%
                    	       		F1S8G4              	12.68%
                    	       		F1RWY4              	12.49%
                    	       		F1RI75              	12.39%
                    	       		I3LT86              	12.29%
                    	       		F1RSQ2              	12.29%
                    	       		F1RS18              	11.71%
                    	       		F1RKN4              	11.61%
                    	       		F1RN02              	11.51%
                    	       		I3LEY1              	11.41%
                    	       		F1RRR4              	11.12%
                    	       		I3LJU8              	10.63%
                    	       		I3LQU2              	9.85%
                    	       		F1SEY2              	9.76%
                    	       		I3LAH1              	9.66%
                    	       		I3LFH7              	9.17%
                    	       		F1RTW2              	9.17%
                    	       		F1RL15              	8.88%
                    	       		F1RKM9              	8.78%
                    	       		F1RNU5              	8.78%
                    	       		F1SC35              	8.78%
                    	       		I3LJ12              	8.59%
                    	       		F1S2M1              	8.39%
                    	       		I3LFK3              	8.29%
                    	       		I3LML1              	8.20%
                    	       		F1RM82              	7.90%
                    	       		I3LSM0              	7.80%
                    	       		I3LHI1              	7.71%
                    	       		I3LCT9              	7.32%
                    	       		I3LGK8              	7.32%
                    	       		F1S2P0              	7.12%
                    	       		F1RVK5              	6.73%
                    	       		F1RX41              	6.44%
                    	       		I3LNI8              	5.85%
                    	       		F1SEY3              	5.66%
                    	       		I3LD03              	5.37%
                    	       		F1S2N9              	5.27%
                    	       		F1RLB7              	5.17%
                    	       		I3L9I4              	5.17%
Bootstrap support for F6W0H5 as seed ortholog is 99%.
Bootstrap support for I3LEB8 as seed ortholog is 91%.

Group of orthologs #1819. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 S.scrofa:173

F6SWB6              	100.00%		F1S834              	100.00%
Bootstrap support for F6SWB6 as seed ortholog is 100%.
Bootstrap support for F1S834 as seed ortholog is 99%.

Group of orthologs #1820. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 S.scrofa:388

F6T8R8              	100.00%		F1SBH4              	100.00%
Bootstrap support for F6T8R8 as seed ortholog is 100%.
Bootstrap support for F1SBH4 as seed ortholog is 100%.

Group of orthologs #1821. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 S.scrofa:388

H2XXL6              	100.00%		F1RMM8              	100.00%
Bootstrap support for H2XXL6 as seed ortholog is 100%.
Bootstrap support for F1RMM8 as seed ortholog is 100%.

Group of orthologs #1822. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 S.scrofa:214

F6XLK3              	100.00%		P00339              	100.00%
                    	       		Q9TSX5              	51.25%
                    	       		P00336              	47.31%
                    	       		I3LL80              	46.59%
                    	       		I3LHN1              	37.99%
Bootstrap support for F6XLK3 as seed ortholog is 100%.
Bootstrap support for P00339 as seed ortholog is 100%.

Group of orthologs #1823. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 S.scrofa:387

H2XRS4              	100.00%		F1SFK6              	100.00%
                    	       		I3LIG4              	6.99%
                    	       		F1SU99              	6.30%
Bootstrap support for H2XRS4 as seed ortholog is 100%.
Bootstrap support for F1SFK6 as seed ortholog is 100%.

Group of orthologs #1824. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 S.scrofa:387

F6W3Q3              	100.00%		F1SSK5              	100.00%
                    	       		F1RGW9              	24.82%
Bootstrap support for F6W3Q3 as seed ortholog is 100%.
Bootstrap support for F1SSK5 as seed ortholog is 100%.

Group of orthologs #1825. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 S.scrofa:387

F6XWN6              	100.00%		F1S2R7              	100.00%
Bootstrap support for F6XWN6 as seed ortholog is 100%.
Bootstrap support for F1S2R7 as seed ortholog is 100%.

Group of orthologs #1826. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 S.scrofa:387

H2XK01              	100.00%		F1RNA4              	100.00%
Bootstrap support for H2XK01 as seed ortholog is 100%.
Bootstrap support for F1RNA4 as seed ortholog is 100%.

Group of orthologs #1827. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.scrofa:40

F6X6B7              	100.00%		F1S8V7              	100.00%
Bootstrap support for F6X6B7 as seed ortholog is 91%.
Bootstrap support for F1S8V7 as seed ortholog is 83%.

Group of orthologs #1828. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.scrofa:387

F6V318              	100.00%		F1SSG2              	100.00%
Bootstrap support for F6V318 as seed ortholog is 99%.
Bootstrap support for F1SSG2 as seed ortholog is 100%.

Group of orthologs #1829. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 S.scrofa:387

H2XZN3              	100.00%		F1RW92              	100.00%
Bootstrap support for H2XZN3 as seed ortholog is 100%.
Bootstrap support for F1RW92 as seed ortholog is 100%.

Group of orthologs #1830. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.scrofa:116

F6PJI6              	100.00%		A1XQV4              	65.31%
Q07068              	100.00%		P42639              	100.00%
                    	       		F1SG00              	19.05%
Bootstrap support for F6PJI6 as seed ortholog is 99%.
Bootstrap support for Q07068 as seed ortholog is 99%.
Bootstrap support for P42639 as seed ortholog is 100%.

Group of orthologs #1831. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 S.scrofa:149

F6XML2              	100.00%		F1RGB8              	100.00%
                    	       		I3LM60              	22.18%
Bootstrap support for F6XML2 as seed ortholog is 100%.
Bootstrap support for F1RGB8 as seed ortholog is 100%.

Group of orthologs #1832. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 S.scrofa:210

F6XTZ0              	100.00%		F1RI95              	100.00%
                    	       		F1RI96              	100.00%
Bootstrap support for F6XTZ0 as seed ortholog is 100%.
Bootstrap support for F1RI95 as seed ortholog is 100%.
Bootstrap support for F1RI96 as seed ortholog is 100%.

Group of orthologs #1833. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 S.scrofa:386

F7BIJ9              	100.00%		F1SGE2              	100.00%
Bootstrap support for F7BIJ9 as seed ortholog is 100%.
Bootstrap support for F1SGE2 as seed ortholog is 100%.

Group of orthologs #1834. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 S.scrofa:386

F6U6L5              	100.00%		P00348              	100.00%
Bootstrap support for F6U6L5 as seed ortholog is 100%.
Bootstrap support for P00348 as seed ortholog is 100%.

Group of orthologs #1835. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 S.scrofa:133

F6THW7              	100.00%		Q15B89              	100.00%
Bootstrap support for F6THW7 as seed ortholog is 100%.
Bootstrap support for Q15B89 as seed ortholog is 100%.

Group of orthologs #1836. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 S.scrofa:386

H2Y240              	100.00%		F1SDA7              	100.00%
Bootstrap support for H2Y240 as seed ortholog is 100%.
Bootstrap support for F1SDA7 as seed ortholog is 100%.

Group of orthologs #1837. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 S.scrofa:72

F6VDV2              	100.00%		F1RJ94              	100.00%
                    	       		F1RJ92              	24.82%
                    	       		F1RW19              	16.82%
Bootstrap support for F6VDV2 as seed ortholog is 100%.
Bootstrap support for F1RJ94 as seed ortholog is 92%.

Group of orthologs #1838. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 S.scrofa:132

F7A8J9              	100.00%		F1RF26              	100.00%
Bootstrap support for F7A8J9 as seed ortholog is 100%.
Bootstrap support for F1RF26 as seed ortholog is 99%.

Group of orthologs #1839. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 S.scrofa:385

F6XIZ4              	100.00%		F2Z513              	100.00%
Bootstrap support for F6XIZ4 as seed ortholog is 100%.
Bootstrap support for F2Z513 as seed ortholog is 100%.

Group of orthologs #1840. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 S.scrofa:152

F6S8Z0              	100.00%		I3LKU9              	100.00%
Bootstrap support for F6S8Z0 as seed ortholog is 100%.
Bootstrap support for I3LKU9 as seed ortholog is 100%.

Group of orthologs #1841. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 S.scrofa:297

F6ZGG6              	100.00%		I3LNE5              	100.00%
Bootstrap support for F6ZGG6 as seed ortholog is 100%.
Bootstrap support for I3LNE5 as seed ortholog is 100%.

Group of orthologs #1842. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 S.scrofa:44

Q4H3S6              	100.00%		F2Z590              	100.00%
Bootstrap support for Q4H3S6 as seed ortholog is 100%.
Bootstrap support for F2Z590 as seed ortholog is 92%.

Group of orthologs #1843. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 S.scrofa:219

F6YFP0              	100.00%		F1S069              	100.00%
                    	       		I3LQV5              	37.38%
                    	       		F1SPY2              	37.18%
                    	       		C1IHT9              	31.81%
Bootstrap support for F6YFP0 as seed ortholog is 100%.
Bootstrap support for F1S069 as seed ortholog is 100%.

Group of orthologs #1844. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 S.scrofa:384

A7BK23              	100.00%		F1S635              	100.00%
                    	       		I3LL32              	25.11%
                    	       		F1S7U2              	17.28%
Bootstrap support for A7BK23 as seed ortholog is 100%.
Bootstrap support for F1S635 as seed ortholog is 100%.

Group of orthologs #1845. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 S.scrofa:384

F7BHN6              	100.00%		F1RP70              	100.00%
                    	       		F1RM18              	5.52%
Bootstrap support for F7BHN6 as seed ortholog is 100%.
Bootstrap support for F1RP70 as seed ortholog is 100%.

Group of orthologs #1846. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 S.scrofa:384

H2XL54              	100.00%		O77773              	100.00%
                    	       		F1SJ19              	39.72%
Bootstrap support for H2XL54 as seed ortholog is 100%.
Bootstrap support for O77773 as seed ortholog is 100%.

Group of orthologs #1847. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 S.scrofa:316

H2XQ91              	100.00%		I3LTK2              	100.00%
                    	       		I3LGA1              	87.89%
Bootstrap support for H2XQ91 as seed ortholog is 100%.
Bootstrap support for I3LTK2 as seed ortholog is 100%.

Group of orthologs #1848. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.scrofa:384

F6UFF5              	100.00%		A5GFZ5              	100.00%
Bootstrap support for F6UFF5 as seed ortholog is 100%.
Bootstrap support for A5GFZ5 as seed ortholog is 100%.

Group of orthologs #1849. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 S.scrofa:384

F6QY42              	100.00%		F1S4P7              	100.00%
Bootstrap support for F6QY42 as seed ortholog is 100%.
Bootstrap support for F1S4P7 as seed ortholog is 100%.

Group of orthologs #1850. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 S.scrofa:313

F6U8U5              	100.00%		I3LHX0              	100.00%
Bootstrap support for F6U8U5 as seed ortholog is 100%.
Bootstrap support for I3LHX0 as seed ortholog is 100%.

Group of orthologs #1851. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 S.scrofa:384

H2XW54              	100.00%		F1SBJ2              	100.00%
Bootstrap support for H2XW54 as seed ortholog is 100%.
Bootstrap support for F1SBJ2 as seed ortholog is 100%.

Group of orthologs #1852. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 S.scrofa:384

F7B890              	100.00%		I3LSS3              	100.00%
Bootstrap support for F7B890 as seed ortholog is 100%.
Bootstrap support for I3LSS3 as seed ortholog is 100%.

Group of orthologs #1853. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 S.scrofa:383

F7A4J9              	100.00%		I3LCF3              	100.00%
                    	       		I3LAH3              	18.66%
Bootstrap support for F7A4J9 as seed ortholog is 100%.
Bootstrap support for I3LCF3 as seed ortholog is 100%.

Group of orthologs #1854. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 S.scrofa:151

H2XTB0              	100.00%		Q4GWZ2              	100.00%
                    	       		F1SJR1              	26.36%
Bootstrap support for H2XTB0 as seed ortholog is 100%.
Bootstrap support for Q4GWZ2 as seed ortholog is 99%.

Group of orthologs #1855. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 S.scrofa:383

F6X618              	100.00%		F1SBT5              	100.00%
Bootstrap support for F6X618 as seed ortholog is 100%.
Bootstrap support for F1SBT5 as seed ortholog is 100%.

Group of orthologs #1856. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 S.scrofa:218

H2XW16              	100.00%		B5APU3              	100.00%
Bootstrap support for H2XW16 as seed ortholog is 86%.
Bootstrap support for B5APU3 as seed ortholog is 100%.

Group of orthologs #1857. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 S.scrofa:383

F7ACG4              	100.00%		F1SK83              	100.00%
Bootstrap support for F7ACG4 as seed ortholog is 100%.
Bootstrap support for F1SK83 as seed ortholog is 100%.

Group of orthologs #1858. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 S.scrofa:382

F6PR01              	100.00%		F1SAG5              	100.00%
                    	       		I3L663              	24.06%
                    	       		F1SCJ4              	18.08%
Bootstrap support for F6PR01 as seed ortholog is 100%.
Bootstrap support for F1SAG5 as seed ortholog is 100%.

Group of orthologs #1859. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 S.scrofa:319

F6QDT9              	100.00%		F1SLA3              	100.00%
Bootstrap support for F6QDT9 as seed ortholog is 100%.
Bootstrap support for F1SLA3 as seed ortholog is 100%.

Group of orthologs #1860. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 S.scrofa:382

F6VKF0              	100.00%		F1S6H4              	100.00%
Bootstrap support for F6VKF0 as seed ortholog is 100%.
Bootstrap support for F1S6H4 as seed ortholog is 100%.

Group of orthologs #1861. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 S.scrofa:382

F6TX35              	100.00%		F1SGX1              	100.00%
Bootstrap support for F6TX35 as seed ortholog is 100%.
Bootstrap support for F1SGX1 as seed ortholog is 100%.

Group of orthologs #1862. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 S.scrofa:235

F6W1C5              	100.00%		F1SEX9              	100.00%
Bootstrap support for F6W1C5 as seed ortholog is 100%.
Bootstrap support for F1SEX9 as seed ortholog is 100%.

Group of orthologs #1863. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 S.scrofa:382

F6WH82              	100.00%		F1SIJ9              	100.00%
Bootstrap support for F6WH82 as seed ortholog is 100%.
Bootstrap support for F1SIJ9 as seed ortholog is 100%.

Group of orthologs #1864. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 S.scrofa:301

F6RD78              	100.00%		I3LT85              	100.00%
Bootstrap support for F6RD78 as seed ortholog is 100%.
Bootstrap support for I3LT85 as seed ortholog is 100%.

Group of orthologs #1865. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 S.scrofa:232

F6SA18              	100.00%		F1RU80              	100.00%
                    	       		F1SEU6              	9.42%
Bootstrap support for F6SA18 as seed ortholog is 100%.
Bootstrap support for F1RU80 as seed ortholog is 100%.

Group of orthologs #1866. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 S.scrofa:21

H2XX66              	100.00%		F1S1E9              	100.00%
                    	       		I3LV20              	72.15%
Bootstrap support for H2XX66 as seed ortholog is 100%.
Bootstrap support for F1S1E9 as seed ortholog is 61%.
Alternative seed ortholog is F1S2V5 (21 bits away from this cluster)

Group of orthologs #1867. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 S.scrofa:138

F7BAT7              	100.00%		F2Z543              	100.00%
                    	       		F1RWF5              	28.67%
Bootstrap support for F7BAT7 as seed ortholog is 100%.
Bootstrap support for F2Z543 as seed ortholog is 100%.

Group of orthologs #1868. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 S.scrofa:381

F6R8C3              	100.00%		F1SIQ4              	100.00%
Bootstrap support for F6R8C3 as seed ortholog is 100%.
Bootstrap support for F1SIQ4 as seed ortholog is 100%.

Group of orthologs #1869. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 S.scrofa:221

H2XR71              	100.00%		F1S225              	100.00%
Bootstrap support for H2XR71 as seed ortholog is 100%.
Bootstrap support for F1S225 as seed ortholog is 100%.

Group of orthologs #1870. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 S.scrofa:381

F6WHI9              	100.00%		I3L7I5              	100.00%
Bootstrap support for F6WHI9 as seed ortholog is 100%.
Bootstrap support for I3L7I5 as seed ortholog is 100%.

Group of orthologs #1871. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 S.scrofa:381

F6TMB1              	100.00%		I3LI72              	100.00%
Bootstrap support for F6TMB1 as seed ortholog is 100%.
Bootstrap support for I3LI72 as seed ortholog is 100%.

Group of orthologs #1872. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 S.scrofa:380

H2XLW7              	100.00%		F1SJG9              	100.00%
                    	       		I3LI55              	49.61%
Bootstrap support for H2XLW7 as seed ortholog is 100%.
Bootstrap support for F1SJG9 as seed ortholog is 100%.

Group of orthologs #1873. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 S.scrofa:326

F6R2V7              	100.00%		F1SDQ0              	100.00%
Bootstrap support for F6R2V7 as seed ortholog is 100%.
Bootstrap support for F1SDQ0 as seed ortholog is 100%.

Group of orthologs #1874. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 S.scrofa:380

F6ZCS4              	100.00%		F1SFR1              	100.00%
Bootstrap support for F6ZCS4 as seed ortholog is 100%.
Bootstrap support for F1SFR1 as seed ortholog is 100%.

Group of orthologs #1875. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 S.scrofa:281

H2XX53              	100.00%		F1S5P3              	100.00%
Bootstrap support for H2XX53 as seed ortholog is 100%.
Bootstrap support for F1S5P3 as seed ortholog is 100%.

Group of orthologs #1876. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:304

H2XVE9              	100.00%		F1SI72              	100.00%
Bootstrap support for H2XVE9 as seed ortholog is 100%.
Bootstrap support for F1SI72 as seed ortholog is 100%.

Group of orthologs #1877. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 S.scrofa:303

F6XG01              	100.00%		I3LT15              	100.00%
                    	       		F1SPM8              	24.62%
Bootstrap support for F6XG01 as seed ortholog is 100%.
Bootstrap support for I3LT15 as seed ortholog is 100%.

Group of orthologs #1878. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 S.scrofa:379

F6XE85              	100.00%		F1RK86              	100.00%
Bootstrap support for F6XE85 as seed ortholog is 100%.
Bootstrap support for F1RK86 as seed ortholog is 100%.

Group of orthologs #1879. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 S.scrofa:209

F6Z491              	100.00%		F2Z5K2              	100.00%
Bootstrap support for F6Z491 as seed ortholog is 100%.
Bootstrap support for F2Z5K2 as seed ortholog is 100%.

Group of orthologs #1880. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 S.scrofa:379

H2XYB1              	100.00%		F1S3R6              	100.00%
Bootstrap support for H2XYB1 as seed ortholog is 100%.
Bootstrap support for F1S3R6 as seed ortholog is 100%.

Group of orthologs #1881. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 S.scrofa:379

H2XWN4              	100.00%		F1SEK2              	100.00%
Bootstrap support for H2XWN4 as seed ortholog is 100%.
Bootstrap support for F1SEK2 as seed ortholog is 100%.

Group of orthologs #1882. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 S.scrofa:378

F6TBW4              	100.00%		I3LCI4              	100.00%
                    	       		I3L598              	42.84%
                    	       		F1S7P2              	19.97%
Bootstrap support for F6TBW4 as seed ortholog is 99%.
Bootstrap support for I3LCI4 as seed ortholog is 100%.

Group of orthologs #1883. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 S.scrofa:378

F6WQ28              	100.00%		F1SV04              	100.00%
                    	       		F1SCU0              	20.89%
Bootstrap support for F6WQ28 as seed ortholog is 100%.
Bootstrap support for F1SV04 as seed ortholog is 100%.

Group of orthologs #1884. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 S.scrofa:111

F6YSB9              	100.00%		F1SRP7              	100.00%
                    	       		F1SNR8              	8.83%
Bootstrap support for F6YSB9 as seed ortholog is 100%.
Bootstrap support for F1SRP7 as seed ortholog is 98%.

Group of orthologs #1885. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 S.scrofa:378

F6TUR1              	100.00%		E1CAJ6              	100.00%
Bootstrap support for F6TUR1 as seed ortholog is 100%.
Bootstrap support for E1CAJ6 as seed ortholog is 100%.

Group of orthologs #1886. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 S.scrofa:189

F6U831              	100.00%		F1RQY4              	100.00%
Bootstrap support for F6U831 as seed ortholog is 100%.
Bootstrap support for F1RQY4 as seed ortholog is 99%.

Group of orthologs #1887. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 S.scrofa:378

F6ZBD0              	100.00%		F1RQR2              	100.00%
Bootstrap support for F6ZBD0 as seed ortholog is 100%.
Bootstrap support for F1RQR2 as seed ortholog is 100%.

Group of orthologs #1888. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 S.scrofa:302

F6RBK2              	100.00%		F1SHE8              	100.00%
Bootstrap support for F6RBK2 as seed ortholog is 100%.
Bootstrap support for F1SHE8 as seed ortholog is 100%.

Group of orthologs #1889. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 S.scrofa:143

F6PW95              	100.00%		F2Z5M7              	100.00%
Bootstrap support for F6PW95 as seed ortholog is 100%.
Bootstrap support for F2Z5M7 as seed ortholog is 99%.

Group of orthologs #1890. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 S.scrofa:257

F6RUQ3              	100.00%		F2Z5N0              	100.00%
Bootstrap support for F6RUQ3 as seed ortholog is 100%.
Bootstrap support for F2Z5N0 as seed ortholog is 100%.

Group of orthologs #1891. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 S.scrofa:136

H2XT98              	100.00%		F1SKQ1              	100.00%
Bootstrap support for H2XT98 as seed ortholog is 100%.
Bootstrap support for F1SKQ1 as seed ortholog is 100%.

Group of orthologs #1892. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 S.scrofa:378

H2Y3Q6              	100.00%		I3LIR4              	100.00%
Bootstrap support for H2Y3Q6 as seed ortholog is 100%.
Bootstrap support for I3LIR4 as seed ortholog is 100%.

Group of orthologs #1893. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 S.scrofa:377

F6YDP2              	100.00%		F1RMS6              	100.00%
                    	       		I3L641              	53.06%
Bootstrap support for F6YDP2 as seed ortholog is 100%.
Bootstrap support for F1RMS6 as seed ortholog is 100%.

Group of orthologs #1894. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:377

F6Z2G5              	100.00%		I3L5W2              	100.00%
                    	       		F1RMZ9              	43.54%
Bootstrap support for F6Z2G5 as seed ortholog is 91%.
Bootstrap support for I3L5W2 as seed ortholog is 100%.

Group of orthologs #1895. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.scrofa:54

F7B262              	100.00%		F1SUN1              	100.00%
Bootstrap support for F7B262 as seed ortholog is 96%.
Bootstrap support for F1SUN1 as seed ortholog is 83%.

Group of orthologs #1896. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 S.scrofa:377

H2XJG6              	100.00%		I3LSI7              	100.00%
Bootstrap support for H2XJG6 as seed ortholog is 100%.
Bootstrap support for I3LSI7 as seed ortholog is 100%.

Group of orthologs #1897. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 S.scrofa:376

F6PYR8              	100.00%		F1RRT3              	100.00%
                    	       		F2Z5E7              	51.48%
Bootstrap support for F6PYR8 as seed ortholog is 100%.
Bootstrap support for F1RRT3 as seed ortholog is 100%.

Group of orthologs #1898. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 S.scrofa:135

F6UUI8              	100.00%		F1RHM9              	100.00%
Bootstrap support for F6UUI8 as seed ortholog is 100%.
Bootstrap support for F1RHM9 as seed ortholog is 99%.

Group of orthologs #1899. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 S.scrofa:376

F6U952              	100.00%		F1RKC7              	100.00%
Bootstrap support for F6U952 as seed ortholog is 100%.
Bootstrap support for F1RKC7 as seed ortholog is 100%.

Group of orthologs #1900. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.scrofa:292

F6SPI7              	100.00%		F1S833              	100.00%
Bootstrap support for F6SPI7 as seed ortholog is 100%.
Bootstrap support for F1S833 as seed ortholog is 100%.

Group of orthologs #1901. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 S.scrofa:321

F7ATG5              	100.00%		F1RJN4              	100.00%
Bootstrap support for F7ATG5 as seed ortholog is 100%.
Bootstrap support for F1RJN4 as seed ortholog is 100%.

Group of orthologs #1902. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 S.scrofa:376

F6X1E1              	100.00%		F1S2W7              	100.00%
Bootstrap support for F6X1E1 as seed ortholog is 100%.
Bootstrap support for F1S2W7 as seed ortholog is 100%.

Group of orthologs #1903. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 S.scrofa:323

F7B3X8              	100.00%		F1RXY0              	100.00%
Bootstrap support for F7B3X8 as seed ortholog is 100%.
Bootstrap support for F1RXY0 as seed ortholog is 100%.

Group of orthologs #1904. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 S.scrofa:291

F6VQ02              	100.00%		I3LNC4              	100.00%
Bootstrap support for F6VQ02 as seed ortholog is 100%.
Bootstrap support for I3LNC4 as seed ortholog is 100%.

Group of orthologs #1905. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 S.scrofa:375

F6RQQ8              	100.00%		F1SPK0              	100.00%
                    	       		I3LAS3              	86.85%
                    	       		F1S360              	33.69%
                    	       		F1SQP3              	5.77%
Bootstrap support for F6RQQ8 as seed ortholog is 100%.
Bootstrap support for F1SPK0 as seed ortholog is 100%.

Group of orthologs #1906. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 S.scrofa:375

F6Q5A8              	100.00%		F1RI52              	100.00%
                    	       		I3LIC8              	6.34%
Bootstrap support for F6Q5A8 as seed ortholog is 100%.
Bootstrap support for F1RI52 as seed ortholog is 100%.

Group of orthologs #1907. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 S.scrofa:223

F7AGV3              	100.00%		D5L7X4              	100.00%
                    	       		F1SLV6              	13.93%
Bootstrap support for F7AGV3 as seed ortholog is 68%.
Alternative seed ortholog is F6TQ36 (31 bits away from this cluster)
Bootstrap support for D5L7X4 as seed ortholog is 99%.

Group of orthologs #1908. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 S.scrofa:375

F7BDS3              	100.00%		F1S8P1              	100.00%
                    	       		I3LAX9              	11.79%
Bootstrap support for F7BDS3 as seed ortholog is 100%.
Bootstrap support for F1S8P1 as seed ortholog is 100%.

Group of orthologs #1909. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 S.scrofa:125

F7AMR5              	100.00%		F2Z5Q6              	100.00%
                    	       		F1SJA1              	40.00%
Bootstrap support for F7AMR5 as seed ortholog is 100%.
Bootstrap support for F2Z5Q6 as seed ortholog is 100%.

Group of orthologs #1910. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 S.scrofa:210

F6U6T9              	100.00%		F1S0C2              	100.00%
Bootstrap support for F6U6T9 as seed ortholog is 100%.
Bootstrap support for F1S0C2 as seed ortholog is 100%.

Group of orthologs #1911. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.scrofa:192

F6UN86              	100.00%		F1SJC6              	100.00%
Bootstrap support for F6UN86 as seed ortholog is 99%.
Bootstrap support for F1SJC6 as seed ortholog is 99%.

Group of orthologs #1912. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 S.scrofa:375

F6VXM8              	100.00%		F1STW6              	100.00%
Bootstrap support for F6VXM8 as seed ortholog is 100%.
Bootstrap support for F1STW6 as seed ortholog is 100%.

Group of orthologs #1913. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 S.scrofa:374

F6WYE6              	100.00%		F1RV79              	100.00%
                    	       		I3LDU2              	30.32%
Bootstrap support for F6WYE6 as seed ortholog is 100%.
Bootstrap support for F1RV79 as seed ortholog is 100%.

Group of orthologs #1914. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 S.scrofa:374

F6W713              	100.00%		F1RKX2              	100.00%
Bootstrap support for F6W713 as seed ortholog is 100%.
Bootstrap support for F1RKX2 as seed ortholog is 100%.

Group of orthologs #1915. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 S.scrofa:374

F6ZUH0              	100.00%		F1RQ32              	100.00%
Bootstrap support for F6ZUH0 as seed ortholog is 100%.
Bootstrap support for F1RQ32 as seed ortholog is 100%.

Group of orthologs #1916. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 S.scrofa:43

F7AM61              	100.00%		F1RPH6              	100.00%
Bootstrap support for F7AM61 as seed ortholog is 100%.
Bootstrap support for F1RPH6 as seed ortholog is 96%.

Group of orthologs #1917. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 S.scrofa:289

F7AY24              	100.00%		F1RRF0              	100.00%
Bootstrap support for F7AY24 as seed ortholog is 100%.
Bootstrap support for F1RRF0 as seed ortholog is 100%.

Group of orthologs #1918. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 S.scrofa:374

F6Z2W9              	100.00%		F1SP14              	100.00%
Bootstrap support for F6Z2W9 as seed ortholog is 100%.
Bootstrap support for F1SP14 as seed ortholog is 100%.

Group of orthologs #1919. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 S.scrofa:374

F7BE59              	100.00%		I3LA62              	100.00%
Bootstrap support for F7BE59 as seed ortholog is 100%.
Bootstrap support for I3LA62 as seed ortholog is 100%.

Group of orthologs #1920. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 S.scrofa:121

F6QQK4              	100.00%		F1RW86              	100.00%
                    	       		F1SR53              	31.34%
                    	       		F1RYJ4              	28.18%
                    	       		F1RQY8              	17.59%
Bootstrap support for F6QQK4 as seed ortholog is 99%.
Bootstrap support for F1RW86 as seed ortholog is 95%.

Group of orthologs #1921. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 S.scrofa:158

F6RGL3              	100.00%		A8BV05              	100.00%
                    	       		F1S6Y5              	30.73%
                    	       		F1S3I1              	7.80%
Bootstrap support for F6RGL3 as seed ortholog is 100%.
Bootstrap support for A8BV05 as seed ortholog is 99%.

Group of orthologs #1922. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 S.scrofa:212

F6T143              	100.00%		F1RVJ7              	100.00%
                    	       		F1S1I8              	31.57%
                    	       		I3LJH4              	9.14%
Bootstrap support for F6T143 as seed ortholog is 100%.
Bootstrap support for F1RVJ7 as seed ortholog is 99%.

Group of orthologs #1923. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 S.scrofa:108

F7BH38              	100.00%		Q09138              	100.00%
                    	       		F1SSN2              	33.94%
                    	       		Q9MYP4              	9.39%
Bootstrap support for F7BH38 as seed ortholog is 100%.
Bootstrap support for Q09138 as seed ortholog is 99%.

Group of orthologs #1924. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 S.scrofa:220

F6SAD5              	100.00%		F1S0D2              	100.00%
                    	       		I3LK02              	69.94%
Bootstrap support for F6SAD5 as seed ortholog is 100%.
Bootstrap support for F1S0D2 as seed ortholog is 100%.

Group of orthologs #1925. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 S.scrofa:373

F6XMI0              	100.00%		F8SIP4              	100.00%
                    	       		F1RKD4              	27.51%
Bootstrap support for F6XMI0 as seed ortholog is 100%.
Bootstrap support for F8SIP4 as seed ortholog is 100%.

Group of orthologs #1926. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 S.scrofa:373

F7ABL1              	100.00%		F1RSS9              	100.00%
Bootstrap support for F7ABL1 as seed ortholog is 100%.
Bootstrap support for F1RSS9 as seed ortholog is 100%.

Group of orthologs #1927. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.scrofa:46

F7AA31              	100.00%		F1SJM3              	100.00%
Bootstrap support for F7AA31 as seed ortholog is 99%.
Bootstrap support for F1SJM3 as seed ortholog is 82%.

Group of orthologs #1928. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 S.scrofa:373

F6XER0              	100.00%		F2Z5F8              	100.00%
Bootstrap support for F6XER0 as seed ortholog is 100%.
Bootstrap support for F2Z5F8 as seed ortholog is 100%.

Group of orthologs #1929. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 S.scrofa:373

H2XT22              	100.00%		I3LDH9              	100.00%
Bootstrap support for H2XT22 as seed ortholog is 100%.
Bootstrap support for I3LDH9 as seed ortholog is 100%.

Group of orthologs #1930. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 S.scrofa:315

H2XK45              	100.00%		P49059              	100.00%
                    	       		P16582              	32.94%
                    	       		Q8SPP9              	26.08%
Bootstrap support for H2XK45 as seed ortholog is 100%.
Bootstrap support for P49059 as seed ortholog is 100%.

Group of orthologs #1931. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 S.scrofa:372

F7AZB8              	100.00%		F1SFY2              	100.00%
                    	       		K7GMX1              	23.20%
Bootstrap support for F7AZB8 as seed ortholog is 100%.
Bootstrap support for F1SFY2 as seed ortholog is 100%.

Group of orthologs #1932. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 S.scrofa:372

F6TGX7              	100.00%		F1S564              	100.00%
Bootstrap support for F6TGX7 as seed ortholog is 100%.
Bootstrap support for F1S564 as seed ortholog is 100%.

Group of orthologs #1933. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.scrofa:39

F7B7R9              	100.00%		F1RU07              	100.00%
Bootstrap support for F7B7R9 as seed ortholog is 96%.
Bootstrap support for F1RU07 as seed ortholog is 72%.
Alternative seed ortholog is F1SCI1 (39 bits away from this cluster)

Group of orthologs #1934. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 S.scrofa:372

F6STU7              	100.00%		Q58DD9              	100.00%
Bootstrap support for F6STU7 as seed ortholog is 100%.
Bootstrap support for Q58DD9 as seed ortholog is 100%.

Group of orthologs #1935. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 S.scrofa:262

H2XLI9              	100.00%		F1SHB2              	100.00%
                    	       		F1S0Q7              	45.42%
                    	       		F1RRW6              	14.92%
Bootstrap support for H2XLI9 as seed ortholog is 100%.
Bootstrap support for F1SHB2 as seed ortholog is 100%.

Group of orthologs #1936. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 S.scrofa:371

Q1RL41              	100.00%		F1S8Y3              	100.00%
                    	       		F1S4M6              	50.23%
Bootstrap support for Q1RL41 as seed ortholog is 100%.
Bootstrap support for F1S8Y3 as seed ortholog is 100%.

Group of orthologs #1937. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.scrofa:371

F6TYL9              	100.00%		F1RWA8              	100.00%
Bootstrap support for F6TYL9 as seed ortholog is 95%.
Bootstrap support for F1RWA8 as seed ortholog is 100%.

Group of orthologs #1938. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 S.scrofa:370

F6RWR9              	100.00%		F1RN28              	100.00%
                    	       		I3LSU1              	27.06%
Bootstrap support for F6RWR9 as seed ortholog is 100%.
Bootstrap support for F1RN28 as seed ortholog is 100%.

Group of orthologs #1939. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 S.scrofa:42

F6YGN3              	100.00%		F1SF57              	100.00%
                    	       		F1SDS3              	15.58%
Bootstrap support for F6YGN3 as seed ortholog is 100%.
Bootstrap support for F1SF57 as seed ortholog is 68%.
Alternative seed ortholog is I3LQH2 (42 bits away from this cluster)

Group of orthologs #1940. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 S.scrofa:370

F6ZF50              	100.00%		I3LG05              	100.00%
                    	       		F1RGM7              	42.08%
Bootstrap support for F6ZF50 as seed ortholog is 100%.
Bootstrap support for I3LG05 as seed ortholog is 100%.

Group of orthologs #1941. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.scrofa:253

F6VDU4              	100.00%		F1RWU0              	100.00%
H2XRS2              	18.73%		F1RS35              	54.93%
F6U734              	18.05%		F1S1U0              	10.99%
                    	       		I3LUU3              	9.74%
                    	       		F1RH97              	8.61%
Bootstrap support for F6VDU4 as seed ortholog is 97%.
Bootstrap support for F1RWU0 as seed ortholog is 100%.

Group of orthologs #1942. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:156

F6SMU1              	100.00%		F1S075              	100.00%
                    	       		I3L553              	17.15%
                    	       		F1SJB4              	9.10%
Bootstrap support for F6SMU1 as seed ortholog is 100%.
Bootstrap support for F1S075 as seed ortholog is 99%.

Group of orthologs #1943. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 S.scrofa:369

H2XP13              	100.00%		F1RM28              	100.00%
                    	       		F1SGT5              	23.99%
Bootstrap support for H2XP13 as seed ortholog is 100%.
Bootstrap support for F1RM28 as seed ortholog is 100%.

Group of orthologs #1944. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 S.scrofa:255

F6UEE4              	100.00%		F1SPQ8              	100.00%
                    	       		F1RWX6              	31.11%
Bootstrap support for F6UEE4 as seed ortholog is 100%.
Bootstrap support for F1SPQ8 as seed ortholog is 99%.

Group of orthologs #1945. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 S.scrofa:369

Q4H367              	100.00%		F1RNT5              	100.00%
                    	       		F1RJN3              	9.80%
Bootstrap support for Q4H367 as seed ortholog is 100%.
Bootstrap support for F1RNT5 as seed ortholog is 100%.

Group of orthologs #1946. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:369

F6ZPX3              	100.00%		F1RWB0              	100.00%
Bootstrap support for F6ZPX3 as seed ortholog is 99%.
Bootstrap support for F1RWB0 as seed ortholog is 100%.

Group of orthologs #1947. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 S.scrofa:369

F6YM02              	100.00%		F1S569              	100.00%
Bootstrap support for F6YM02 as seed ortholog is 100%.
Bootstrap support for F1S569 as seed ortholog is 100%.

Group of orthologs #1948. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 S.scrofa:369

F7B580              	100.00%		F1SR70              	100.00%
Bootstrap support for F7B580 as seed ortholog is 100%.
Bootstrap support for F1SR70 as seed ortholog is 100%.

Group of orthologs #1949. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 S.scrofa:369

H2XR31              	100.00%		I3LAV0              	100.00%
Bootstrap support for H2XR31 as seed ortholog is 100%.
Bootstrap support for I3LAV0 as seed ortholog is 100%.

Group of orthologs #1950. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.scrofa:33

Q8I7E2              	100.00%		F2Z4Z3              	100.00%
Bootstrap support for Q8I7E2 as seed ortholog is 100%.
Bootstrap support for F2Z4Z3 as seed ortholog is 95%.

Group of orthologs #1951. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.scrofa:369

H2XZ54              	100.00%		I3LCH3              	100.00%
Bootstrap support for H2XZ54 as seed ortholog is 100%.
Bootstrap support for I3LCH3 as seed ortholog is 100%.

Group of orthologs #1952. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 S.scrofa:76

F6R8R2              	100.00%		F1S3P7              	100.00%
F6R8U2              	83.38%		
F6YNP9              	27.50%		
H2XTA5              	25.29%		
F7ARX5              	21.62%		
H2XZG6              	19.12%		
F6UCV3              	18.53%		
F6XF34              	8.68%		
Bootstrap support for F6R8R2 as seed ortholog is 100%.
Bootstrap support for F1S3P7 as seed ortholog is 95%.

Group of orthologs #1953. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 S.scrofa:181

F6YA02              	100.00%		Q9MZ15              	100.00%
                    	       		Q9MZ16              	39.33%
                    	       		F1SE26              	33.47%
                    	       		Q29380              	32.64%
Bootstrap support for F6YA02 as seed ortholog is 100%.
Bootstrap support for Q9MZ15 as seed ortholog is 100%.

Group of orthologs #1954. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 S.scrofa:368

F7BLG0              	100.00%		F1RLL1              	100.00%
                    	       		I3LUJ0              	51.57%
                    	       		I3LMB2              	42.51%
Bootstrap support for F7BLG0 as seed ortholog is 100%.
Bootstrap support for F1RLL1 as seed ortholog is 100%.

Group of orthologs #1955. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 S.scrofa:368

F6S1A9              	100.00%		F1SJU7              	100.00%
                    	       		F1SIA4              	11.41%
Bootstrap support for F6S1A9 as seed ortholog is 100%.
Bootstrap support for F1SJU7 as seed ortholog is 100%.

Group of orthologs #1956. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 S.scrofa:62

F6QHD2              	100.00%		F1RMM1              	100.00%
Bootstrap support for F6QHD2 as seed ortholog is 100%.
Bootstrap support for F1RMM1 as seed ortholog is 92%.

Group of orthologs #1957. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 S.scrofa:368

F6UH30              	100.00%		F1RQL3              	100.00%
Bootstrap support for F6UH30 as seed ortholog is 100%.
Bootstrap support for F1RQL3 as seed ortholog is 100%.

Group of orthologs #1958. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 S.scrofa:368

F6TIA8              	100.00%		F1S119              	100.00%
Bootstrap support for F6TIA8 as seed ortholog is 100%.
Bootstrap support for F1S119 as seed ortholog is 100%.

Group of orthologs #1959. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 S.scrofa:207

F6Y437              	100.00%		F1SET8              	100.00%
Bootstrap support for F6Y437 as seed ortholog is 100%.
Bootstrap support for F1SET8 as seed ortholog is 100%.

Group of orthologs #1960. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 S.scrofa:249

Q68A31              	100.00%		F1S7H6              	100.00%
Bootstrap support for Q68A31 as seed ortholog is 100%.
Bootstrap support for F1S7H6 as seed ortholog is 100%.

Group of orthologs #1961. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 S.scrofa:367

F7B779              	100.00%		F1SJC3              	100.00%
                    	       		F1RUY4              	37.02%
                    	       		I3LSV4              	28.25%
Bootstrap support for F7B779 as seed ortholog is 100%.
Bootstrap support for F1SJC3 as seed ortholog is 100%.

Group of orthologs #1962. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.scrofa:280

F6QHU2              	100.00%		F1SIU8              	100.00%
                    	       		F1SJH8              	100.00%
Bootstrap support for F6QHU2 as seed ortholog is 100%.
Bootstrap support for F1SIU8 as seed ortholog is 100%.
Bootstrap support for F1SJH8 as seed ortholog is 100%.

Group of orthologs #1963. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.scrofa:53

F6V597              	100.00%		F1SIN0              	100.00%
                    	       		F1S070              	14.12%
Bootstrap support for F6V597 as seed ortholog is 99%.
Bootstrap support for F1SIN0 as seed ortholog is 90%.

Group of orthologs #1964. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 S.scrofa:94

F6XNC0              	100.00%		F1RT62              	100.00%
Bootstrap support for F6XNC0 as seed ortholog is 100%.
Bootstrap support for F1RT62 as seed ortholog is 92%.

Group of orthologs #1965. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 S.scrofa:367

F6T385              	100.00%		F1SEZ6              	100.00%
Bootstrap support for F6T385 as seed ortholog is 100%.
Bootstrap support for F1SEZ6 as seed ortholog is 100%.

Group of orthologs #1966. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.scrofa:68

F6Z839              	100.00%		F1RVS6              	100.00%
Bootstrap support for F6Z839 as seed ortholog is 99%.
Bootstrap support for F1RVS6 as seed ortholog is 98%.

Group of orthologs #1967. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 S.scrofa:367

F6T7H6              	100.00%		Q8MIR4              	100.00%
Bootstrap support for F6T7H6 as seed ortholog is 100%.
Bootstrap support for Q8MIR4 as seed ortholog is 100%.

Group of orthologs #1968. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 S.scrofa:366

F6VYS2              	100.00%		I3LD78              	100.00%
                    	       		F1SBR8              	34.85%
                    	       		F1RGC2              	6.20%
Bootstrap support for F6VYS2 as seed ortholog is 100%.
Bootstrap support for I3LD78 as seed ortholog is 100%.

Group of orthologs #1969. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 S.scrofa:114

F6YVL2              	100.00%		F1S7L8              	100.00%
                    	       		F1SNE5              	20.70%
Bootstrap support for F6YVL2 as seed ortholog is 100%.
Bootstrap support for F1S7L8 as seed ortholog is 99%.

Group of orthologs #1970. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:366

F6QHM7              	100.00%		F1RY74              	100.00%
Bootstrap support for F6QHM7 as seed ortholog is 100%.
Bootstrap support for F1RY74 as seed ortholog is 100%.

Group of orthologs #1971. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 S.scrofa:366

F6X8B5              	100.00%		F1RXE3              	100.00%
Bootstrap support for F6X8B5 as seed ortholog is 100%.
Bootstrap support for F1RXE3 as seed ortholog is 100%.

Group of orthologs #1972. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 S.scrofa:366

F6XTQ1              	100.00%		F1SDJ8              	100.00%
Bootstrap support for F6XTQ1 as seed ortholog is 100%.
Bootstrap support for F1SDJ8 as seed ortholog is 100%.

Group of orthologs #1973. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 S.scrofa:366

F7B5Q2              	100.00%		F1S3H4              	100.00%
Bootstrap support for F7B5Q2 as seed ortholog is 100%.
Bootstrap support for F1S3H4 as seed ortholog is 100%.

Group of orthologs #1974. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.scrofa:366

F6WMV3              	100.00%		F1SKW0              	100.00%
Bootstrap support for F6WMV3 as seed ortholog is 97%.
Bootstrap support for F1SKW0 as seed ortholog is 100%.

Group of orthologs #1975. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.scrofa:366

F6W2L5              	100.00%		F1SU52              	100.00%
Bootstrap support for F6W2L5 as seed ortholog is 100%.
Bootstrap support for F1SU52 as seed ortholog is 100%.

Group of orthologs #1976. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 S.scrofa:88

F6WNH9              	100.00%		F2Z5C9              	100.00%
Bootstrap support for F6WNH9 as seed ortholog is 100%.
Bootstrap support for F2Z5C9 as seed ortholog is 100%.

Group of orthologs #1977. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 S.scrofa:366

F6ZAR8              	100.00%		I3LAL4              	100.00%
Bootstrap support for F6ZAR8 as seed ortholog is 100%.
Bootstrap support for I3LAL4 as seed ortholog is 100%.

Group of orthologs #1978. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:366

H2XZI2              	100.00%		F1SFS4              	100.00%
Bootstrap support for H2XZI2 as seed ortholog is 99%.
Bootstrap support for F1SFS4 as seed ortholog is 100%.

Group of orthologs #1979. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 S.scrofa:196

H2XS52              	100.00%		F1SUD6              	100.00%
Bootstrap support for H2XS52 as seed ortholog is 100%.
Bootstrap support for F1SUD6 as seed ortholog is 99%.

Group of orthologs #1980. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 S.scrofa:217

F6ZLL3              	100.00%		F1RNP6              	100.00%
                    	       		F1RGR1              	25.22%
Bootstrap support for F6ZLL3 as seed ortholog is 100%.
Bootstrap support for F1RNP6 as seed ortholog is 100%.

Group of orthologs #1981. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 S.scrofa:365

H2XQ34              	100.00%		F1RLB6              	100.00%
                    	       		F1SAT6              	60.81%
Bootstrap support for H2XQ34 as seed ortholog is 100%.
Bootstrap support for F1RLB6 as seed ortholog is 100%.

Group of orthologs #1982. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 S.scrofa:365

H2XP72              	100.00%		F1SVD4              	100.00%
                    	       		F1S3E2              	43.54%
Bootstrap support for H2XP72 as seed ortholog is 100%.
Bootstrap support for F1SVD4 as seed ortholog is 100%.

Group of orthologs #1983. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 S.scrofa:365

F6RRF2              	100.00%		A7TX81              	100.00%
Bootstrap support for F6RRF2 as seed ortholog is 100%.
Bootstrap support for A7TX81 as seed ortholog is 100%.

Group of orthologs #1984. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 S.scrofa:365

F6S3G5              	100.00%		F1RGT0              	100.00%
Bootstrap support for F6S3G5 as seed ortholog is 100%.
Bootstrap support for F1RGT0 as seed ortholog is 100%.

Group of orthologs #1985. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 S.scrofa:365

F6ULS9              	100.00%		F1RW40              	100.00%
Bootstrap support for F6ULS9 as seed ortholog is 100%.
Bootstrap support for F1RW40 as seed ortholog is 100%.

Group of orthologs #1986. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 S.scrofa:365

F6TDK2              	100.00%		F1S1V4              	100.00%
Bootstrap support for F6TDK2 as seed ortholog is 100%.
Bootstrap support for F1S1V4 as seed ortholog is 100%.

Group of orthologs #1987. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 S.scrofa:365

H2XM46              	100.00%		F1S396              	100.00%
Bootstrap support for H2XM46 as seed ortholog is 100%.
Bootstrap support for F1S396 as seed ortholog is 100%.

Group of orthologs #1988. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 S.scrofa:364

F6XWE7              	100.00%		F1S348              	100.00%
                    	       		F1SLJ2              	27.28%
                    	       		F1SDI4              	9.02%
Bootstrap support for F6XWE7 as seed ortholog is 100%.
Bootstrap support for F1S348 as seed ortholog is 100%.

Group of orthologs #1989. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 S.scrofa:364

F6PHT6              	100.00%		F1S060              	100.00%
Bootstrap support for F6PHT6 as seed ortholog is 100%.
Bootstrap support for F1S060 as seed ortholog is 100%.

Group of orthologs #1990. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 S.scrofa:364

F6V5I4              	100.00%		F1SJ22              	100.00%
Bootstrap support for F6V5I4 as seed ortholog is 100%.
Bootstrap support for F1SJ22 as seed ortholog is 100%.

Group of orthologs #1991. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 S.scrofa:364

F6SQQ1              	100.00%		I3L8I5              	100.00%
Bootstrap support for F6SQQ1 as seed ortholog is 100%.
Bootstrap support for I3L8I5 as seed ortholog is 100%.

Group of orthologs #1992. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 S.scrofa:364

H2XY43              	100.00%		F1RN04              	100.00%
Bootstrap support for H2XY43 as seed ortholog is 100%.
Bootstrap support for F1RN04 as seed ortholog is 100%.

Group of orthologs #1993. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 S.scrofa:363

F7AXE7              	100.00%		F1S980              	100.00%
                    	       		F1RY94              	20.26%
Bootstrap support for F7AXE7 as seed ortholog is 100%.
Bootstrap support for F1S980 as seed ortholog is 100%.

Group of orthologs #1994. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 S.scrofa:363

F6SKK8              	100.00%		F1S3H7              	100.00%
Bootstrap support for F6SKK8 as seed ortholog is 100%.
Bootstrap support for F1S3H7 as seed ortholog is 100%.

Group of orthologs #1995. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 S.scrofa:363

F7AA18              	100.00%		F1RLI8              	100.00%
Bootstrap support for F7AA18 as seed ortholog is 100%.
Bootstrap support for F1RLI8 as seed ortholog is 100%.

Group of orthologs #1996. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 S.scrofa:363

F6TXN5              	100.00%		F1SM98              	100.00%
Bootstrap support for F6TXN5 as seed ortholog is 100%.
Bootstrap support for F1SM98 as seed ortholog is 100%.

Group of orthologs #1997. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 S.scrofa:363

F7AIP5              	100.00%		F1SND3              	100.00%
Bootstrap support for F7AIP5 as seed ortholog is 100%.
Bootstrap support for F1SND3 as seed ortholog is 100%.

Group of orthologs #1998. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 S.scrofa:363

H2XY13              	100.00%		F1SU73              	100.00%
Bootstrap support for H2XY13 as seed ortholog is 100%.
Bootstrap support for F1SU73 as seed ortholog is 100%.

Group of orthologs #1999. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 S.scrofa:363

H2XU61              	100.00%		I3LKN7              	100.00%
Bootstrap support for H2XU61 as seed ortholog is 100%.
Bootstrap support for I3LKN7 as seed ortholog is 100%.

Group of orthologs #2000. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 S.scrofa:36

Q4H3W9              	100.00%		F1RV96              	100.00%
                    	       		I3LU63              	100.00%
                    	       		I3LTS6              	61.94%
                    	       		A5GFZ9              	22.49%
Bootstrap support for Q4H3W9 as seed ortholog is 100%.
Bootstrap support for F1RV96 as seed ortholog is 57%.
Alternative seed ortholog is F1RKV4 (36 bits away from this cluster)
Bootstrap support for I3LU63 as seed ortholog is 68%.
Alternative seed ortholog is F1RKV4 (36 bits away from this cluster)

Group of orthologs #2001. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 S.scrofa:279

F6ZGS5              	100.00%		F1SJQ5              	100.00%
                    	       		P83686              	100.00%
                    	       		F1S4N2              	13.30%
Bootstrap support for F6ZGS5 as seed ortholog is 100%.
Bootstrap support for F1SJQ5 as seed ortholog is 100%.
Bootstrap support for P83686 as seed ortholog is 100%.

Group of orthologs #2002. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 S.scrofa:362

F6YW41              	100.00%		F1SLC6              	100.00%
                    	       		F1RTP4              	27.83%
Bootstrap support for F6YW41 as seed ortholog is 100%.
Bootstrap support for F1SLC6 as seed ortholog is 100%.

Group of orthologs #2003. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 S.scrofa:280

F6Z541              	100.00%		I3LE23              	100.00%
                    	       		F1SD01              	56.42%
Bootstrap support for F6Z541 as seed ortholog is 100%.
Bootstrap support for I3LE23 as seed ortholog is 100%.

Group of orthologs #2004. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.scrofa:362

F6UUV9              	100.00%		F1SA56              	100.00%
Bootstrap support for F6UUV9 as seed ortholog is 100%.
Bootstrap support for F1SA56 as seed ortholog is 100%.

Group of orthologs #2005. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 S.scrofa:362

F6Z910              	100.00%		F1S3I2              	100.00%
Bootstrap support for F6Z910 as seed ortholog is 100%.
Bootstrap support for F1S3I2 as seed ortholog is 100%.

Group of orthologs #2006. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 S.scrofa:361

F6U019              	100.00%		Q06AT3              	100.00%
                    	       		F1SAA9              	85.14%
                    	       		F1SAA5              	43.58%
Bootstrap support for F6U019 as seed ortholog is 100%.
Bootstrap support for Q06AT3 as seed ortholog is 100%.

Group of orthologs #2007. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 S.scrofa:361

F6QF10              	100.00%		F1SBR5              	100.00%
                    	       		F1SGR3              	13.26%
Bootstrap support for F6QF10 as seed ortholog is 100%.
Bootstrap support for F1SBR5 as seed ortholog is 100%.

Group of orthologs #2008. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 S.scrofa:361

F6R906              	100.00%		F1SLE9              	100.00%
                    	       		F1SC85              	17.44%
Bootstrap support for F6R906 as seed ortholog is 100%.
Bootstrap support for F1SLE9 as seed ortholog is 100%.

Group of orthologs #2009. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 S.scrofa:361

F7B7X5              	100.00%		I3LJD3              	100.00%
                    	       		I3L671              	12.86%
Bootstrap support for F7B7X5 as seed ortholog is 100%.
Bootstrap support for I3LJD3 as seed ortholog is 100%.

Group of orthologs #2010. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 S.scrofa:361

F6S4C0              	100.00%		F1RW87              	100.00%
Bootstrap support for F6S4C0 as seed ortholog is 100%.
Bootstrap support for F1RW87 as seed ortholog is 100%.

Group of orthologs #2011. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 S.scrofa:270

H2XVD5              	100.00%		A1XQU1              	100.00%
Bootstrap support for H2XVD5 as seed ortholog is 100%.
Bootstrap support for A1XQU1 as seed ortholog is 100%.

Group of orthologs #2012. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 S.scrofa:166

F6UUA2              	100.00%		F1SJI1              	100.00%
Bootstrap support for F6UUA2 as seed ortholog is 100%.
Bootstrap support for F1SJI1 as seed ortholog is 99%.

Group of orthologs #2013. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 S.scrofa:361

F6X8P5              	100.00%		F1SH07              	100.00%
Bootstrap support for F6X8P5 as seed ortholog is 100%.
Bootstrap support for F1SH07 as seed ortholog is 100%.

Group of orthologs #2014. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.scrofa:18

H2XWP0              	100.00%		F1SLJ0              	100.00%
                    	       		Q06AU3              	23.47%
Bootstrap support for H2XWP0 as seed ortholog is 100%.
Bootstrap support for F1SLJ0 as seed ortholog is 78%.

Group of orthologs #2015. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 S.scrofa:360

F6QG73              	100.00%		F1SUX8              	100.00%
Bootstrap support for F6QG73 as seed ortholog is 100%.
Bootstrap support for F1SUX8 as seed ortholog is 100%.

Group of orthologs #2016. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 S.scrofa:360

H2XRN4              	100.00%		I3LA19              	100.00%
Bootstrap support for H2XRN4 as seed ortholog is 100%.
Bootstrap support for I3LA19 as seed ortholog is 100%.

Group of orthologs #2017. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 S.scrofa:87

F7AQE7              	100.00%		F1SJQ3              	100.00%
                    	       		F1RZ71              	25.00%
                    	       		F1RK75              	13.04%
Bootstrap support for F7AQE7 as seed ortholog is 100%.
Bootstrap support for F1SJQ3 as seed ortholog is 99%.

Group of orthologs #2018. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.scrofa:359

F6Z015              	100.00%		F1SSY8              	100.00%
                    	       		F1SSZ0              	34.00%
                    	       		F1RF49              	10.33%
Bootstrap support for F6Z015 as seed ortholog is 82%.
Bootstrap support for F1SSY8 as seed ortholog is 100%.

Group of orthologs #2019. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 S.scrofa:359

F6Y978              	100.00%		F1RJW1              	100.00%
                    	       		I3LI64              	95.92%
Bootstrap support for F6Y978 as seed ortholog is 100%.
Bootstrap support for F1RJW1 as seed ortholog is 100%.

Group of orthologs #2020. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.scrofa:137

H2XL87              	100.00%		Q52NJ2              	100.00%
                    	       		Q06AU7              	24.07%
Bootstrap support for H2XL87 as seed ortholog is 100%.
Bootstrap support for Q52NJ2 as seed ortholog is 100%.

Group of orthologs #2021. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 S.scrofa:359

F6Z7E0              	100.00%		F1RF38              	100.00%
Bootstrap support for F6Z7E0 as seed ortholog is 100%.
Bootstrap support for F1RF38 as seed ortholog is 100%.

Group of orthologs #2022. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 S.scrofa:359

F6WPV3              	100.00%		F1SI07              	100.00%
Bootstrap support for F6WPV3 as seed ortholog is 100%.
Bootstrap support for F1SI07 as seed ortholog is 100%.

Group of orthologs #2023. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.scrofa:359

F6PJS6              	100.00%		Q6Q2C2              	100.00%
Bootstrap support for F6PJS6 as seed ortholog is 100%.
Bootstrap support for Q6Q2C2 as seed ortholog is 100%.

Group of orthologs #2024. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 S.scrofa:359

F6VXD0              	100.00%		Q6UAQ8              	100.00%
Bootstrap support for F6VXD0 as seed ortholog is 100%.
Bootstrap support for Q6UAQ8 as seed ortholog is 100%.

Group of orthologs #2025. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 S.scrofa:50

F6T724              	100.00%		Q28944              	100.00%
F6T6J2              	11.59%		F1S4J6              	57.26%
Bootstrap support for F6T724 as seed ortholog is 68%.
Alternative seed ortholog is F6T6N4 (20 bits away from this cluster)
Bootstrap support for Q28944 as seed ortholog is 89%.

Group of orthologs #2026. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.scrofa:104

F6W6K0              	100.00%		F1RLG0              	100.00%
Bootstrap support for F6W6K0 as seed ortholog is 87%.
Bootstrap support for F1RLG0 as seed ortholog is 66%.
Alternative seed ortholog is F1S235 (104 bits away from this cluster)

Group of orthologs #2027. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 S.scrofa:358

F6UJ07              	100.00%		F1S2K6              	100.00%
Bootstrap support for F6UJ07 as seed ortholog is 100%.
Bootstrap support for F1S2K6 as seed ortholog is 100%.

Group of orthologs #2028. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 S.scrofa:185

F6XDD9              	100.00%		F1S6Y3              	100.00%
Bootstrap support for F6XDD9 as seed ortholog is 100%.
Bootstrap support for F1S6Y3 as seed ortholog is 100%.

Group of orthologs #2029. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.scrofa:118

F6RCT7              	100.00%		F1SV03              	100.00%
Bootstrap support for F6RCT7 as seed ortholog is 99%.
Bootstrap support for F1SV03 as seed ortholog is 100%.

Group of orthologs #2030. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 S.scrofa:358

F6Z7A9              	100.00%		I3LAE8              	100.00%
Bootstrap support for F6Z7A9 as seed ortholog is 100%.
Bootstrap support for I3LAE8 as seed ortholog is 100%.

Group of orthologs #2031. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:174

F7A8Z2              	100.00%		I3LSK2              	100.00%
Bootstrap support for F7A8Z2 as seed ortholog is 96%.
Bootstrap support for I3LSK2 as seed ortholog is 100%.

Group of orthologs #2032. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 S.scrofa:142

H2Y1F3              	100.00%		P04761              	100.00%
                    	       		P11483              	22.05%
                    	       		F1SCL4              	20.51%
                    	       		F1SIA0              	7.18%
                    	       		P06199              	5.47%
Bootstrap support for H2Y1F3 as seed ortholog is 40%.
Alternative seed ortholog is F6QF27 (43 bits away from this cluster)
Bootstrap support for P04761 as seed ortholog is 99%.

Group of orthologs #2033. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 S.scrofa:357

H2XLH4              	100.00%		F1S5K5              	100.00%
                    	       		E5DCJ4              	29.92%
Bootstrap support for H2XLH4 as seed ortholog is 100%.
Bootstrap support for F1S5K5 as seed ortholog is 100%.

Group of orthologs #2034. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 S.scrofa:357

F6WZS8              	100.00%		F1RR44              	100.00%
Bootstrap support for F6WZS8 as seed ortholog is 100%.
Bootstrap support for F1RR44 as seed ortholog is 100%.

Group of orthologs #2035. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 S.scrofa:357

F6SVK8              	100.00%		F1S812              	100.00%
Bootstrap support for F6SVK8 as seed ortholog is 100%.
Bootstrap support for F1S812 as seed ortholog is 100%.

Group of orthologs #2036. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 S.scrofa:357

F6Y444              	100.00%		F1RY11              	100.00%
Bootstrap support for F6Y444 as seed ortholog is 100%.
Bootstrap support for F1RY11 as seed ortholog is 100%.

Group of orthologs #2037. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 S.scrofa:357

F6ZD00              	100.00%		F1SD79              	100.00%
Bootstrap support for F6ZD00 as seed ortholog is 100%.
Bootstrap support for F1SD79 as seed ortholog is 100%.

Group of orthologs #2038. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 S.scrofa:357

H2XKC9              	100.00%		F1SKC4              	100.00%
Bootstrap support for H2XKC9 as seed ortholog is 100%.
Bootstrap support for F1SKC4 as seed ortholog is 100%.

Group of orthologs #2039. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 S.scrofa:357

F7A160              	100.00%		I3L5E9              	100.00%
Bootstrap support for F7A160 as seed ortholog is 100%.
Bootstrap support for I3L5E9 as seed ortholog is 100%.

Group of orthologs #2040. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 S.scrofa:356

F6QFM3              	100.00%		F1RNQ3              	100.00%
                    	       		I3LEI2              	9.36%
Bootstrap support for F6QFM3 as seed ortholog is 100%.
Bootstrap support for F1RNQ3 as seed ortholog is 100%.

Group of orthologs #2041. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 S.scrofa:356

F6TAV4              	100.00%		F1RWM8              	100.00%
                    	       		F1RK87              	20.06%
Bootstrap support for F6TAV4 as seed ortholog is 100%.
Bootstrap support for F1RWM8 as seed ortholog is 100%.

Group of orthologs #2042. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 S.scrofa:123

F6TXZ8              	100.00%		F1SJU4              	100.00%
                    	       		I3L973              	9.47%
Bootstrap support for F6TXZ8 as seed ortholog is 100%.
Bootstrap support for F1SJU4 as seed ortholog is 99%.

Group of orthologs #2043. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:99

F6XCQ7              	100.00%		F2Z5J9              	100.00%
                    	       		Q52NJ1              	41.03%
Bootstrap support for F6XCQ7 as seed ortholog is 100%.
Bootstrap support for F2Z5J9 as seed ortholog is 99%.

Group of orthologs #2044. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 S.scrofa:217

F6ZUD7              	100.00%		I3LUT9              	100.00%
                    	       		I3LN98              	22.92%
Bootstrap support for F6ZUD7 as seed ortholog is 100%.
Bootstrap support for I3LUT9 as seed ortholog is 100%.

Group of orthologs #2045. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 S.scrofa:356

F6RQS4              	100.00%		F1SRE0              	100.00%
Bootstrap support for F6RQS4 as seed ortholog is 100%.
Bootstrap support for F1SRE0 as seed ortholog is 100%.

Group of orthologs #2046. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 S.scrofa:355

F6YPB3              	100.00%		F1SKT4              	100.00%
                    	       		F1RPJ2              	5.44%
Bootstrap support for F6YPB3 as seed ortholog is 100%.
Bootstrap support for F1SKT4 as seed ortholog is 100%.

Group of orthologs #2047. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 S.scrofa:355

F7ABC0              	100.00%		F1S745              	100.00%
Bootstrap support for F7ABC0 as seed ortholog is 100%.
Bootstrap support for F1S745 as seed ortholog is 100%.

Group of orthologs #2048. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 S.scrofa:355

F6S6A5              	100.00%		Q8WN98              	100.00%
Bootstrap support for F6S6A5 as seed ortholog is 100%.
Bootstrap support for Q8WN98 as seed ortholog is 100%.

Group of orthologs #2049. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 S.scrofa:354

F6XQS7              	100.00%		F1SUN0              	100.00%
                    	       		F1RFU0              	58.71%
                    	       		Q7YS78              	27.39%
                    	       		P79260              	19.29%
Bootstrap support for F6XQS7 as seed ortholog is 100%.
Bootstrap support for F1SUN0 as seed ortholog is 100%.

Group of orthologs #2050. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 S.scrofa:69

F6ZXN6              	100.00%		P02543              	100.00%
                    	       		P02540              	36.48%
                    	       		F1RR02              	26.85%
                    	       		F1SHC0              	21.48%
Bootstrap support for F6ZXN6 as seed ortholog is 92%.
Bootstrap support for P02543 as seed ortholog is 97%.

Group of orthologs #2051. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:133

F6QTW3              	100.00%		Q00655              	100.00%
                    	       		F1STD6              	35.56%
Bootstrap support for F6QTW3 as seed ortholog is 93%.
Bootstrap support for Q00655 as seed ortholog is 99%.

Group of orthologs #2052. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.scrofa:121

Q4H308              	100.00%		F1SBP6              	100.00%
                    	       		F1SJD8              	41.21%
Bootstrap support for Q4H308 as seed ortholog is 99%.
Bootstrap support for F1SBP6 as seed ortholog is 99%.

Group of orthologs #2053. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 S.scrofa:354

F6QX56              	100.00%		F1RNW4              	100.00%
Bootstrap support for F6QX56 as seed ortholog is 100%.
Bootstrap support for F1RNW4 as seed ortholog is 100%.

Group of orthologs #2054. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 S.scrofa:111

F7AXB1              	100.00%		F1RS24              	100.00%
Bootstrap support for F7AXB1 as seed ortholog is 100%.
Bootstrap support for F1RS24 as seed ortholog is 99%.

Group of orthologs #2055. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 S.scrofa:354

F6Q8V8              	100.00%		F2Z5E6              	100.00%
Bootstrap support for F6Q8V8 as seed ortholog is 100%.
Bootstrap support for F2Z5E6 as seed ortholog is 100%.

Group of orthologs #2056. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 S.scrofa:354

F6XMX2              	100.00%		F1SND5              	100.00%
Bootstrap support for F6XMX2 as seed ortholog is 100%.
Bootstrap support for F1SND5 as seed ortholog is 100%.

Group of orthologs #2057. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.scrofa:254

H2XYX4              	100.00%		F1S0B6              	100.00%
Bootstrap support for H2XYX4 as seed ortholog is 100%.
Bootstrap support for F1S0B6 as seed ortholog is 100%.

Group of orthologs #2058. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 S.scrofa:354

H2XST8              	100.00%		I3L864              	100.00%
Bootstrap support for H2XST8 as seed ortholog is 100%.
Bootstrap support for I3L864 as seed ortholog is 100%.

Group of orthologs #2059. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 S.scrofa:54

Q7YT79              	100.00%		I3LKU0              	100.00%
Bootstrap support for Q7YT79 as seed ortholog is 94%.
Bootstrap support for I3LKU0 as seed ortholog is 99%.

Group of orthologs #2060. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.scrofa:38

H2XQH0              	100.00%		P80276              	100.00%
F6ZRC6              	8.61%		P82125              	15.84%
Bootstrap support for H2XQH0 as seed ortholog is 99%.
Bootstrap support for P80276 as seed ortholog is 85%.

Group of orthologs #2061. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 S.scrofa:353

F7ARL3              	100.00%		A0AAS4              	100.00%
                    	       		F1S122              	21.55%
Bootstrap support for F7ARL3 as seed ortholog is 100%.
Bootstrap support for A0AAS4 as seed ortholog is 100%.

Group of orthologs #2062. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 S.scrofa:241

F6TBE2              	100.00%		F1SD70              	100.00%
                    	       		I3LKM9              	12.04%
Bootstrap support for F6TBE2 as seed ortholog is 100%.
Bootstrap support for F1SD70 as seed ortholog is 100%.

Group of orthologs #2063. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.scrofa:281

H2XQ42              	100.00%		I3LD27              	100.00%
                    	       		F1S5W3              	11.97%
Bootstrap support for H2XQ42 as seed ortholog is 99%.
Bootstrap support for I3LD27 as seed ortholog is 100%.

Group of orthologs #2064. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 S.scrofa:116

F6SW03              	100.00%		F1S880              	100.00%
Bootstrap support for F6SW03 as seed ortholog is 100%.
Bootstrap support for F1S880 as seed ortholog is 99%.

Group of orthologs #2065. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 S.scrofa:353

H2XLD1              	100.00%		F1RG11              	100.00%
Bootstrap support for H2XLD1 as seed ortholog is 100%.
Bootstrap support for F1RG11 as seed ortholog is 100%.

Group of orthologs #2066. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.scrofa:353

F6WS50              	100.00%		F1S322              	100.00%
Bootstrap support for F6WS50 as seed ortholog is 100%.
Bootstrap support for F1S322 as seed ortholog is 100%.

Group of orthologs #2067. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 S.scrofa:353

F6Y7V1              	100.00%		F1SD54              	100.00%
Bootstrap support for F6Y7V1 as seed ortholog is 100%.
Bootstrap support for F1SD54 as seed ortholog is 100%.

Group of orthologs #2068. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 S.scrofa:353

H2XWU7              	100.00%		F1RNN2              	100.00%
Bootstrap support for H2XWU7 as seed ortholog is 100%.
Bootstrap support for F1RNN2 as seed ortholog is 100%.

Group of orthologs #2069. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 S.scrofa:136

F6V304              	100.00%		I3L7H0              	100.00%
Bootstrap support for F6V304 as seed ortholog is 100%.
Bootstrap support for I3L7H0 as seed ortholog is 100%.

Group of orthologs #2070. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 S.scrofa:352

F6T065              	100.00%		K7GPV1              	100.00%
                    	       		I3LGR4              	59.63%
                    	       		I3LQG4              	19.26%
                    	       		I3L866              	11.96%
Bootstrap support for F6T065 as seed ortholog is 100%.
Bootstrap support for K7GPV1 as seed ortholog is 100%.

Group of orthologs #2071. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.scrofa:79

F6REF5              	100.00%		F1SMN1              	100.00%
F6XGI2              	26.96%		F1SGP8              	15.65%
Bootstrap support for F6REF5 as seed ortholog is 97%.
Bootstrap support for F1SMN1 as seed ortholog is 99%.

Group of orthologs #2072. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 S.scrofa:352

H2XMH4              	100.00%		F1SDA4              	100.00%
                    	       		I3L783              	51.78%
Bootstrap support for H2XMH4 as seed ortholog is 100%.
Bootstrap support for F1SDA4 as seed ortholog is 100%.

Group of orthologs #2073. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 S.scrofa:276

F7AAS8              	100.00%		I3LPR4              	100.00%
                    	       		F1S852              	65.02%
Bootstrap support for F7AAS8 as seed ortholog is 100%.
Bootstrap support for I3LPR4 as seed ortholog is 100%.

Group of orthologs #2074. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 S.scrofa:352

F6WRK0              	100.00%		F1RNM7              	100.00%
Bootstrap support for F6WRK0 as seed ortholog is 100%.
Bootstrap support for F1RNM7 as seed ortholog is 100%.

Group of orthologs #2075. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 S.scrofa:352

F6WTW2              	100.00%		F1SQ00              	100.00%
Bootstrap support for F6WTW2 as seed ortholog is 100%.
Bootstrap support for F1SQ00 as seed ortholog is 100%.

Group of orthologs #2076. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 S.scrofa:352

F6ZTE1              	100.00%		F1SM42              	100.00%
Bootstrap support for F6ZTE1 as seed ortholog is 100%.
Bootstrap support for F1SM42 as seed ortholog is 100%.

Group of orthologs #2077. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 S.scrofa:242

F6ZRB6              	100.00%		F1SSL6              	100.00%
Bootstrap support for F6ZRB6 as seed ortholog is 100%.
Bootstrap support for F1SSL6 as seed ortholog is 100%.

Group of orthologs #2078. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 S.scrofa:352

F6T5V5              	100.00%		K7GNH0              	100.00%
Bootstrap support for F6T5V5 as seed ortholog is 100%.
Bootstrap support for K7GNH0 as seed ortholog is 100%.

Group of orthologs #2079. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 S.scrofa:352

F6WSZ0              	100.00%		I3LMX3              	100.00%
Bootstrap support for F6WSZ0 as seed ortholog is 100%.
Bootstrap support for I3LMX3 as seed ortholog is 100%.

Group of orthologs #2080. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:142

F6WXG6              	100.00%		O46427              	100.00%
Bootstrap support for F6WXG6 as seed ortholog is 99%.
Bootstrap support for O46427 as seed ortholog is 99%.

Group of orthologs #2081. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 S.scrofa:351

F6VG38              	100.00%		F1SMC1              	100.00%
                    	       		I3LEP6              	100.00%
Bootstrap support for F6VG38 as seed ortholog is 100%.
Bootstrap support for F1SMC1 as seed ortholog is 100%.
Bootstrap support for I3LEP6 as seed ortholog is 100%.

Group of orthologs #2082. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:187

F7BFT5              	100.00%		I3LMK6              	100.00%
                    	       		F1SBE4              	40.74%
Bootstrap support for F7BFT5 as seed ortholog is 99%.
Bootstrap support for I3LMK6 as seed ortholog is 100%.

Group of orthologs #2083. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 S.scrofa:351

F6UM67              	100.00%		F1S439              	100.00%
Bootstrap support for F6UM67 as seed ortholog is 100%.
Bootstrap support for F1S439 as seed ortholog is 100%.

Group of orthologs #2084. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:54

F6YFX5              	100.00%		F1S2D2              	100.00%
Bootstrap support for F6YFX5 as seed ortholog is 99%.
Bootstrap support for F1S2D2 as seed ortholog is 94%.

Group of orthologs #2085. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 S.scrofa:351

F6VHI4              	100.00%		F1SKU1              	100.00%
Bootstrap support for F6VHI4 as seed ortholog is 100%.
Bootstrap support for F1SKU1 as seed ortholog is 100%.

Group of orthologs #2086. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.scrofa:69

F6UBJ3              	100.00%		I3LI16              	100.00%
Bootstrap support for F6UBJ3 as seed ortholog is 100%.
Bootstrap support for I3LI16 as seed ortholog is 96%.

Group of orthologs #2087. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 S.scrofa:351

H2XTC5              	100.00%		F1SP03              	100.00%
Bootstrap support for H2XTC5 as seed ortholog is 100%.
Bootstrap support for F1SP03 as seed ortholog is 100%.

Group of orthologs #2088. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 S.scrofa:240

Q6IMM2              	100.00%		F1SDL3              	100.00%
Bootstrap support for Q6IMM2 as seed ortholog is 100%.
Bootstrap support for F1SDL3 as seed ortholog is 100%.

Group of orthologs #2089. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 S.scrofa:351

F7B369              	100.00%		I3LKC4              	100.00%
Bootstrap support for F7B369 as seed ortholog is 100%.
Bootstrap support for I3LKC4 as seed ortholog is 100%.

Group of orthologs #2090. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 S.scrofa:97

F6WSV3              	100.00%		F1SUM0              	100.00%
                    	       		F1SR71              	6.96%
                    	       		I3LFT9              	6.96%
Bootstrap support for F6WSV3 as seed ortholog is 100%.
Bootstrap support for F1SUM0 as seed ortholog is 99%.

Group of orthologs #2091. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 S.scrofa:350

F6XKQ6              	100.00%		I3LIA4              	100.00%
F6YRA9              	100.00%		
Bootstrap support for F6XKQ6 as seed ortholog is 100%.
Bootstrap support for F6YRA9 as seed ortholog is 100%.
Bootstrap support for I3LIA4 as seed ortholog is 100%.

Group of orthologs #2092. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:221

F6RS66              	100.00%		F1S6Q9              	100.00%
Bootstrap support for F6RS66 as seed ortholog is 100%.
Bootstrap support for F1S6Q9 as seed ortholog is 100%.

Group of orthologs #2093. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 S.scrofa:350

F6YW46              	100.00%		F1RRA5              	100.00%
Bootstrap support for F6YW46 as seed ortholog is 100%.
Bootstrap support for F1RRA5 as seed ortholog is 100%.

Group of orthologs #2094. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 S.scrofa:350

F6RXF3              	100.00%		I3L713              	100.00%
Bootstrap support for F6RXF3 as seed ortholog is 100%.
Bootstrap support for I3L713 as seed ortholog is 100%.

Group of orthologs #2095. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 S.scrofa:350

F6VHL9              	100.00%		F2Z5H0              	100.00%
Bootstrap support for F6VHL9 as seed ortholog is 100%.
Bootstrap support for F2Z5H0 as seed ortholog is 100%.

Group of orthologs #2096. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 S.scrofa:350

F6ZIM0              	100.00%		I3LTB2              	100.00%
Bootstrap support for F6ZIM0 as seed ortholog is 100%.
Bootstrap support for I3LTB2 as seed ortholog is 100%.

Group of orthologs #2097. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 S.scrofa:349

F7AZT4              	100.00%		I3L8Z3              	100.00%
                    	       		F1RVT5              	64.64%
Bootstrap support for F7AZT4 as seed ortholog is 100%.
Bootstrap support for I3L8Z3 as seed ortholog is 100%.

Group of orthologs #2098. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 S.scrofa:277

F6VVB7              	100.00%		F1RNY7              	100.00%
Bootstrap support for F6VVB7 as seed ortholog is 100%.
Bootstrap support for F1RNY7 as seed ortholog is 100%.

Group of orthologs #2099. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 S.scrofa:349

F6WCU4              	100.00%		F1RP14              	100.00%
Bootstrap support for F6WCU4 as seed ortholog is 100%.
Bootstrap support for F1RP14 as seed ortholog is 100%.

Group of orthologs #2100. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 S.scrofa:349

F6PJM3              	100.00%		F1SB38              	100.00%
Bootstrap support for F6PJM3 as seed ortholog is 100%.
Bootstrap support for F1SB38 as seed ortholog is 100%.

Group of orthologs #2101. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 S.scrofa:198

F6QQA0              	100.00%		F1SQP2              	100.00%
Bootstrap support for F6QQA0 as seed ortholog is 100%.
Bootstrap support for F1SQP2 as seed ortholog is 100%.

Group of orthologs #2102. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.scrofa:69

F6R3W0              	100.00%		F1SUT0              	100.00%
Bootstrap support for F6R3W0 as seed ortholog is 100%.
Bootstrap support for F1SUT0 as seed ortholog is 99%.

Group of orthologs #2103. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 S.scrofa:349

F6QZL4              	100.00%		F1SVB2              	100.00%
Bootstrap support for F6QZL4 as seed ortholog is 100%.
Bootstrap support for F1SVB2 as seed ortholog is 100%.

Group of orthologs #2104. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 S.scrofa:349

F6WCT6              	100.00%		F1SF21              	100.00%
Bootstrap support for F6WCT6 as seed ortholog is 100%.
Bootstrap support for F1SF21 as seed ortholog is 100%.

Group of orthologs #2105. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 S.scrofa:281

H2XY62              	100.00%		D3K5L7              	100.00%
Bootstrap support for H2XY62 as seed ortholog is 100%.
Bootstrap support for D3K5L7 as seed ortholog is 100%.

Group of orthologs #2106. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 S.scrofa:349

H2Y3F1              	100.00%		F1S8X9              	100.00%
Bootstrap support for H2Y3F1 as seed ortholog is 100%.
Bootstrap support for F1S8X9 as seed ortholog is 100%.

Group of orthologs #2107. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 S.scrofa:182

F6YL86              	100.00%		I3LUX2              	100.00%
Bootstrap support for F6YL86 as seed ortholog is 100%.
Bootstrap support for I3LUX2 as seed ortholog is 99%.

Group of orthologs #2108. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 S.scrofa:91

H2Y0A5              	100.00%		I3LK33              	100.00%
Bootstrap support for H2Y0A5 as seed ortholog is 100%.
Bootstrap support for I3LK33 as seed ortholog is 100%.

Group of orthologs #2109. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 S.scrofa:348

F6XS01              	100.00%		F1SDA0              	100.00%
                    	       		I3LL54              	72.38%
                    	       		F1SMQ7              	25.00%
                    	       		P21999              	23.69%
Bootstrap support for F6XS01 as seed ortholog is 100%.
Bootstrap support for F1SDA0 as seed ortholog is 100%.

Group of orthologs #2110. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 S.scrofa:128

F6VUH2              	100.00%		I3LJ88              	100.00%
                    	       		Q9N0Y9              	24.72%
                    	       		F1RZB5              	18.61%
                    	       		F1SSY3              	18.33%
Bootstrap support for F6VUH2 as seed ortholog is 100%.
Bootstrap support for I3LJ88 as seed ortholog is 100%.

Group of orthologs #2111. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 S.scrofa:348

F6YCY6              	100.00%		F1RRU5              	100.00%
                    	       		F1S1U3              	9.33%
Bootstrap support for F6YCY6 as seed ortholog is 100%.
Bootstrap support for F1RRU5 as seed ortholog is 100%.

Group of orthologs #2112. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 S.scrofa:348

F6ZRN6              	100.00%		F1SMR8              	100.00%
                    	       		I3LQA9              	90.67%
Bootstrap support for F6ZRN6 as seed ortholog is 100%.
Bootstrap support for F1SMR8 as seed ortholog is 100%.

Group of orthologs #2113. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 S.scrofa:348

F6TFE2              	100.00%		F1RJN0              	100.00%
Bootstrap support for F6TFE2 as seed ortholog is 100%.
Bootstrap support for F1RJN0 as seed ortholog is 100%.

Group of orthologs #2114. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.scrofa:253

F6ZTS6              	100.00%		I3LHK5              	100.00%
Bootstrap support for F6ZTS6 as seed ortholog is 100%.
Bootstrap support for I3LHK5 as seed ortholog is 100%.

Group of orthologs #2115. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 S.scrofa:79

H2Y2X2              	100.00%		P01025              	100.00%
F6U649              	17.10%		F1SBS4              	41.32%
                    	       		F1S3H9              	27.88%
                    	       		F1RQW2              	10.21%
Bootstrap support for H2Y2X2 as seed ortholog is 100%.
Bootstrap support for P01025 as seed ortholog is 82%.

Group of orthologs #2116. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 S.scrofa:347

F6U3Q1              	100.00%		F1SGF1              	100.00%
Bootstrap support for F6U3Q1 as seed ortholog is 100%.
Bootstrap support for F1SGF1 as seed ortholog is 100%.

Group of orthologs #2117. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 S.scrofa:55

F6QEH2              	100.00%		I3L974              	100.00%
Bootstrap support for F6QEH2 as seed ortholog is 100%.
Bootstrap support for I3L974 as seed ortholog is 92%.

Group of orthologs #2118. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 S.scrofa:347

H2XVS8              	100.00%		F1RS52              	100.00%
Bootstrap support for H2XVS8 as seed ortholog is 100%.
Bootstrap support for F1RS52 as seed ortholog is 100%.

Group of orthologs #2119. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 S.scrofa:347

H2XXK6              	100.00%		F1RWH6              	100.00%
Bootstrap support for H2XXK6 as seed ortholog is 100%.
Bootstrap support for F1RWH6 as seed ortholog is 100%.

Group of orthologs #2120. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 S.scrofa:170

F6ZCT8              	100.00%		I3L6T1              	100.00%
Bootstrap support for F6ZCT8 as seed ortholog is 99%.
Bootstrap support for I3L6T1 as seed ortholog is 99%.

Group of orthologs #2121. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.scrofa:107

F6XQX8              	100.00%		P79432              	100.00%
Bootstrap support for F6XQX8 as seed ortholog is 100%.
Bootstrap support for P79432 as seed ortholog is 99%.

Group of orthologs #2122. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 S.scrofa:346

H2XQJ7              	100.00%		F1SG93              	100.00%
                    	       		F1RNF5              	7.91%
Bootstrap support for H2XQJ7 as seed ortholog is 100%.
Bootstrap support for F1SG93 as seed ortholog is 100%.

Group of orthologs #2123. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 S.scrofa:52

Q9NL28              	100.00%		F1SUI0              	100.00%
                    	       		Q2HXW4              	35.53%
Bootstrap support for Q9NL28 as seed ortholog is 100%.
Bootstrap support for F1SUI0 as seed ortholog is 73%.
Alternative seed ortholog is F1SS89 (52 bits away from this cluster)

Group of orthologs #2124. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.scrofa:287

F6TYU6              	100.00%		F1RST2              	100.00%
Bootstrap support for F6TYU6 as seed ortholog is 90%.
Bootstrap support for F1RST2 as seed ortholog is 100%.

Group of orthologs #2125. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 S.scrofa:346

F6YCP6              	100.00%		F1RFL6              	100.00%
Bootstrap support for F6YCP6 as seed ortholog is 100%.
Bootstrap support for F1RFL6 as seed ortholog is 100%.

Group of orthologs #2126. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 S.scrofa:346

F6S0S0              	100.00%		F1SJA3              	100.00%
Bootstrap support for F6S0S0 as seed ortholog is 100%.
Bootstrap support for F1SJA3 as seed ortholog is 100%.

Group of orthologs #2127. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 S.scrofa:346

F7A1H6              	100.00%		F1RV99              	100.00%
Bootstrap support for F7A1H6 as seed ortholog is 100%.
Bootstrap support for F1RV99 as seed ortholog is 100%.

Group of orthologs #2128. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 S.scrofa:86

H2XN98              	100.00%		F1S866              	100.00%
Bootstrap support for H2XN98 as seed ortholog is 100%.
Bootstrap support for F1S866 as seed ortholog is 96%.

Group of orthologs #2129. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.scrofa:129

F7B9K0              	100.00%		F1S123              	100.00%
H2Y2D9              	36.48%		
F6TL47              	35.45%		
F6PUR6              	8.86%		
H2XJM1              	6.20%		
L7N0S0              	5.61%		
H2XXR0              	5.61%		
Bootstrap support for F7B9K0 as seed ortholog is 87%.
Bootstrap support for F1S123 as seed ortholog is 99%.

Group of orthologs #2130. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:168

F6Y940              	100.00%		F1S100              	100.00%
                    	       		K7GMY6              	70.03%
                    	       		F1RMA8              	59.38%
Bootstrap support for F6Y940 as seed ortholog is 100%.
Bootstrap support for F1S100 as seed ortholog is 100%.

Group of orthologs #2131. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 S.scrofa:345

F6QL17              	100.00%		I3LFS0              	100.00%
                    	       		F1SFU2              	75.51%
Bootstrap support for F6QL17 as seed ortholog is 100%.
Bootstrap support for I3LFS0 as seed ortholog is 100%.

Group of orthologs #2132. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 S.scrofa:302

F6QHP8              	100.00%		D0G6X4              	100.00%
Bootstrap support for F6QHP8 as seed ortholog is 100%.
Bootstrap support for D0G6X4 as seed ortholog is 100%.

Group of orthologs #2133. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:165

F6WAG8              	100.00%		F1SAC1              	100.00%
Bootstrap support for F6WAG8 as seed ortholog is 100%.
Bootstrap support for F1SAC1 as seed ortholog is 100%.

Group of orthologs #2134. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.scrofa:345

H2XS53              	100.00%		F1S850              	100.00%
Bootstrap support for H2XS53 as seed ortholog is 94%.
Bootstrap support for F1S850 as seed ortholog is 100%.

Group of orthologs #2135. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 S.scrofa:179

F6U637              	100.00%		F1SH94              	100.00%
                    	       		Q29052              	40.72%
                    	       		F1SH96              	36.14%
                    	       		O02668              	22.17%
                    	       		P79263              	16.89%
                    	       		F1RUM0              	9.10%
Bootstrap support for F6U637 as seed ortholog is 100%.
Bootstrap support for F1SH94 as seed ortholog is 99%.

Group of orthologs #2136. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.scrofa:206

F6TFC4              	100.00%		I3LEB7              	100.00%
                    	       		F1SD62              	16.00%
Bootstrap support for F6TFC4 as seed ortholog is 99%.
Bootstrap support for I3LEB7 as seed ortholog is 100%.

Group of orthologs #2137. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 S.scrofa:45

Q8T886              	100.00%		F1SM62              	100.00%
                    	       		F1SM59              	83.17%
Bootstrap support for Q8T886 as seed ortholog is 100%.
Bootstrap support for F1SM62 as seed ortholog is 93%.

Group of orthologs #2138. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:28

Q7YT82              	100.00%		I3LVS7              	100.00%
                    	       		F2Z5K4              	50.00%
Bootstrap support for Q7YT82 as seed ortholog is 100%.
Bootstrap support for I3LVS7 as seed ortholog is 92%.

Group of orthologs #2139. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 S.scrofa:344

F6TQ12              	100.00%		F1SNQ9              	100.00%
Bootstrap support for F6TQ12 as seed ortholog is 100%.
Bootstrap support for F1SNQ9 as seed ortholog is 100%.

Group of orthologs #2140. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 S.scrofa:344

H2XZ35              	100.00%		F1RKB6              	100.00%
Bootstrap support for H2XZ35 as seed ortholog is 100%.
Bootstrap support for F1RKB6 as seed ortholog is 100%.

Group of orthologs #2141. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 S.scrofa:344

I6L7H7              	100.00%		I3L8T3              	100.00%
Bootstrap support for I6L7H7 as seed ortholog is 100%.
Bootstrap support for I3L8T3 as seed ortholog is 100%.

Group of orthologs #2142. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 S.scrofa:136

F6S3S9              	100.00%		O77735              	100.00%
                    	       		F1S2F7              	50.28%
                    	       		F1SJ46              	10.83%
Bootstrap support for F6S3S9 as seed ortholog is 100%.
Bootstrap support for O77735 as seed ortholog is 99%.

Group of orthologs #2143. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 S.scrofa:343

F6PWD4              	100.00%		F1S9R5              	100.00%
                    	       		I3L5T2              	24.01%
Bootstrap support for F6PWD4 as seed ortholog is 100%.
Bootstrap support for F1S9R5 as seed ortholog is 100%.

Group of orthologs #2144. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 S.scrofa:343

F6QWP6              	100.00%		F1SPY1              	100.00%
                    	       		F1SQV8              	37.10%
Bootstrap support for F6QWP6 as seed ortholog is 100%.
Bootstrap support for F1SPY1 as seed ortholog is 100%.

Group of orthologs #2145. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 S.scrofa:343

F6W2M8              	100.00%		F1S8Y5              	100.00%
                    	       		B5KJG2              	47.62%
Bootstrap support for F6W2M8 as seed ortholog is 100%.
Bootstrap support for F1S8Y5 as seed ortholog is 100%.

Group of orthologs #2146. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.scrofa:126

H2XQ24              	100.00%		F1RMA9              	100.00%
                    	       		F1S103              	12.09%
Bootstrap support for H2XQ24 as seed ortholog is 100%.
Bootstrap support for F1RMA9 as seed ortholog is 99%.

Group of orthologs #2147. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:343

H2XQB0              	100.00%		I3LPP8              	100.00%
                    	       		F2Z5I2              	28.34%
Bootstrap support for H2XQB0 as seed ortholog is 100%.
Bootstrap support for I3LPP8 as seed ortholog is 100%.

Group of orthologs #2148. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 S.scrofa:343

F6PN41              	100.00%		F1SUE3              	100.00%
Bootstrap support for F6PN41 as seed ortholog is 100%.
Bootstrap support for F1SUE3 as seed ortholog is 100%.

Group of orthologs #2149. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 S.scrofa:102

F6UJB5              	100.00%		F1SU78              	100.00%
Bootstrap support for F6UJB5 as seed ortholog is 100%.
Bootstrap support for F1SU78 as seed ortholog is 99%.

Group of orthologs #2150. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 S.scrofa:343

F6R8G4              	100.00%		I3LS35              	100.00%
Bootstrap support for F6R8G4 as seed ortholog is 100%.
Bootstrap support for I3LS35 as seed ortholog is 100%.

Group of orthologs #2151. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 S.scrofa:342

F7AZQ8              	100.00%		F1SL50              	100.00%
                    	       		I3LIF2              	47.33%
                    	       		I3L5X9              	35.12%
                    	       		F1SLW1              	33.81%
                    	       		I3LV26              	13.65%
Bootstrap support for F7AZQ8 as seed ortholog is 100%.
Bootstrap support for F1SL50 as seed ortholog is 100%.

Group of orthologs #2152. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 S.scrofa:342

F6W023              	100.00%		F1SDD9              	100.00%
                    	       		F1SJH4              	34.43%
                    	       		I3LJA1              	26.69%
                    	       		I3LNY9              	8.69%
Bootstrap support for F6W023 as seed ortholog is 100%.
Bootstrap support for F1SDD9 as seed ortholog is 100%.

Group of orthologs #2153. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 S.scrofa:342

Q1RPW1              	100.00%		F1SET7              	100.00%
                    	       		F1RPJ6              	8.31%
Bootstrap support for Q1RPW1 as seed ortholog is 100%.
Bootstrap support for F1SET7 as seed ortholog is 100%.

Group of orthologs #2154. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 S.scrofa:342

F6PR08              	100.00%		F1RZQ2              	100.00%
Bootstrap support for F6PR08 as seed ortholog is 100%.
Bootstrap support for F1RZQ2 as seed ortholog is 100%.

Group of orthologs #2155. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 S.scrofa:342

F6PM63              	100.00%		F1SA40              	100.00%
Bootstrap support for F6PM63 as seed ortholog is 100%.
Bootstrap support for F1SA40 as seed ortholog is 100%.

Group of orthologs #2156. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:80

F6V9C5              	100.00%		F1SIK8              	100.00%
Bootstrap support for F6V9C5 as seed ortholog is 100%.
Bootstrap support for F1SIK8 as seed ortholog is 96%.

Group of orthologs #2157. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 S.scrofa:342

F7AWS8              	100.00%		F1SHJ7              	100.00%
Bootstrap support for F7AWS8 as seed ortholog is 100%.
Bootstrap support for F1SHJ7 as seed ortholog is 100%.

Group of orthologs #2158. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:157

H2Y1B2              	100.00%		F1S8J6              	100.00%
Bootstrap support for H2Y1B2 as seed ortholog is 100%.
Bootstrap support for F1S8J6 as seed ortholog is 100%.

Group of orthologs #2159. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 S.scrofa:341

F6ZBK7              	100.00%		I3LNX4              	100.00%
                    	       		I3LSC9              	39.72%
                    	       		F1RYG3              	39.28%
                    	       		F1RYG7              	37.75%
Bootstrap support for F6ZBK7 as seed ortholog is 100%.
Bootstrap support for I3LNX4 as seed ortholog is 100%.

Group of orthologs #2160. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 S.scrofa:341

F6RJ12              	100.00%		F1SSV7              	100.00%
                    	       		F1RHA5              	9.24%
Bootstrap support for F6RJ12 as seed ortholog is 100%.
Bootstrap support for F1SSV7 as seed ortholog is 100%.

Group of orthologs #2161. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 S.scrofa:341

F6QIP6              	100.00%		O97581              	100.00%
                    	       		F1S681              	35.14%
Bootstrap support for F6QIP6 as seed ortholog is 100%.
Bootstrap support for O97581 as seed ortholog is 100%.

Group of orthologs #2162. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.scrofa:188

F6ZZP5              	100.00%		F1RR69              	100.00%
Bootstrap support for F6ZZP5 as seed ortholog is 100%.
Bootstrap support for F1RR69 as seed ortholog is 100%.

Group of orthologs #2163. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 S.scrofa:245

F6T3V6              	100.00%		F1SPE8              	100.00%
Bootstrap support for F6T3V6 as seed ortholog is 100%.
Bootstrap support for F1SPE8 as seed ortholog is 100%.

Group of orthologs #2164. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 S.scrofa:128

F6TEI5              	100.00%		I3L5X8              	100.00%
Bootstrap support for F6TEI5 as seed ortholog is 100%.
Bootstrap support for I3L5X8 as seed ortholog is 100%.

Group of orthologs #2165. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 S.scrofa:340

F7AUB9              	100.00%		E7D6R2              	100.00%
F6T886              	49.14%		E7D6R3              	51.63%
F7BDU0              	18.43%		Q95332              	44.92%
Bootstrap support for F7AUB9 as seed ortholog is 100%.
Bootstrap support for E7D6R2 as seed ortholog is 100%.

Group of orthologs #2166. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 S.scrofa:340

H2Y1E6              	100.00%		F1SPH2              	100.00%
                    	       		I3LLT5              	87.56%
Bootstrap support for H2Y1E6 as seed ortholog is 100%.
Bootstrap support for F1SPH2 as seed ortholog is 100%.

Group of orthologs #2167. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 S.scrofa:340

F7BDK3              	100.00%		A5GFN5              	100.00%
Bootstrap support for F7BDK3 as seed ortholog is 100%.
Bootstrap support for A5GFN5 as seed ortholog is 100%.

Group of orthologs #2168. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.scrofa:23

F7A801              	100.00%		F1RZV9              	100.00%
Bootstrap support for F7A801 as seed ortholog is 100%.
Bootstrap support for F1RZV9 as seed ortholog is 78%.

Group of orthologs #2169. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 S.scrofa:340

F6WW70              	100.00%		F1SFL7              	100.00%
Bootstrap support for F6WW70 as seed ortholog is 100%.
Bootstrap support for F1SFL7 as seed ortholog is 100%.

Group of orthologs #2170. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 S.scrofa:340

F6ZB45              	100.00%		F1SGA4              	100.00%
Bootstrap support for F6ZB45 as seed ortholog is 100%.
Bootstrap support for F1SGA4 as seed ortholog is 100%.

Group of orthologs #2171. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 S.scrofa:157

F6YI64              	100.00%		F2Z5L7              	100.00%
Bootstrap support for F6YI64 as seed ortholog is 100%.
Bootstrap support for F2Z5L7 as seed ortholog is 100%.

Group of orthologs #2172. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 S.scrofa:269

H2XZQ0              	100.00%		F1SI09              	100.00%
Bootstrap support for H2XZQ0 as seed ortholog is 100%.
Bootstrap support for F1SI09 as seed ortholog is 100%.

Group of orthologs #2173. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:187

F6PH03              	100.00%		F1RFU7              	100.00%
                    	       		F1SRL4              	46.23%
                    	       		F1SP42              	45.68%
                    	       		I3L766              	41.12%
                    	       		F1S9C8              	41.12%
                    	       		F1SMU4              	39.54%
                    	       		F1SC52              	34.98%
                    	       		F1SMX9              	31.60%
                    	       		F1SRL7              	24.69%
                    	       		F1SMY0              	24.45%
                    	       		I3LRY2              	24.21%
                    	       		O02840              	16.04%
                    	       		I3LFD4              	5.50%
Bootstrap support for F6PH03 as seed ortholog is 95%.
Bootstrap support for F1RFU7 as seed ortholog is 99%.

Group of orthologs #2174. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 S.scrofa:339

F7A1F6              	100.00%		F1RQN6              	100.00%
F7A1G9              	29.52%		F1SAL4              	17.10%
Bootstrap support for F7A1F6 as seed ortholog is 100%.
Bootstrap support for F1RQN6 as seed ortholog is 100%.

Group of orthologs #2175. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:229

F7BF76              	100.00%		F1SHH6              	100.00%
                    	       		I3LJI7              	49.01%
                    	       		F1SML5              	17.79%
Bootstrap support for F7BF76 as seed ortholog is 99%.
Bootstrap support for F1SHH6 as seed ortholog is 100%.

Group of orthologs #2176. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 S.scrofa:339

F6U6Z4              	100.00%		F1S9A4              	100.00%
                    	       		F1RIP6              	27.36%
Bootstrap support for F6U6Z4 as seed ortholog is 100%.
Bootstrap support for F1S9A4 as seed ortholog is 100%.

Group of orthologs #2177. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 S.scrofa:339

F7BK20              	100.00%		F1S012              	100.00%
                    	       		F1RI50              	25.18%
Bootstrap support for F7BK20 as seed ortholog is 100%.
Bootstrap support for F1S012 as seed ortholog is 100%.

Group of orthologs #2178. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 S.scrofa:339

F6QHG7              	100.00%		F1RTV6              	100.00%
Bootstrap support for F6QHG7 as seed ortholog is 100%.
Bootstrap support for F1RTV6 as seed ortholog is 100%.

Group of orthologs #2179. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 S.scrofa:339

F6VD75              	100.00%		F1RU20              	100.00%
Bootstrap support for F6VD75 as seed ortholog is 100%.
Bootstrap support for F1RU20 as seed ortholog is 100%.

Group of orthologs #2180. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 S.scrofa:239

F6QEE3              	100.00%		F1SMW5              	100.00%
Bootstrap support for F6QEE3 as seed ortholog is 100%.
Bootstrap support for F1SMW5 as seed ortholog is 100%.

Group of orthologs #2181. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 S.scrofa:339

F6Y6W3              	100.00%		F1S0X6              	100.00%
Bootstrap support for F6Y6W3 as seed ortholog is 100%.
Bootstrap support for F1S0X6 as seed ortholog is 100%.

Group of orthologs #2182. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 S.scrofa:339

F6WVX7              	100.00%		F1SR83              	100.00%
Bootstrap support for F6WVX7 as seed ortholog is 100%.
Bootstrap support for F1SR83 as seed ortholog is 100%.

Group of orthologs #2183. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 S.scrofa:339

H2Y2L0              	100.00%		F1SKY2              	100.00%
Bootstrap support for H2Y2L0 as seed ortholog is 100%.
Bootstrap support for F1SKY2 as seed ortholog is 100%.

Group of orthologs #2184. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 S.scrofa:114

F7A172              	100.00%		I3LS96              	100.00%
Bootstrap support for F7A172 as seed ortholog is 100%.
Bootstrap support for I3LS96 as seed ortholog is 99%.

Group of orthologs #2185. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 S.scrofa:106

F6SS10              	100.00%		P06867              	100.00%
                    	       		F1SPS6              	11.89%
                    	       		F1SB93              	11.05%
                    	       		I3LTB5              	6.97%
Bootstrap support for F6SS10 as seed ortholog is 100%.
Bootstrap support for P06867 as seed ortholog is 96%.

Group of orthologs #2186. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 S.scrofa:338

F6YH98              	100.00%		F2Z5G6              	100.00%
                    	       		I3LLH6              	20.05%
Bootstrap support for F6YH98 as seed ortholog is 100%.
Bootstrap support for F2Z5G6 as seed ortholog is 100%.

Group of orthologs #2187. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 S.scrofa:338

C4B8X6              	100.00%		F1RRH7              	100.00%
Bootstrap support for C4B8X6 as seed ortholog is 100%.
Bootstrap support for F1RRH7 as seed ortholog is 100%.

Group of orthologs #2188. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 S.scrofa:338

F6SZQ5              	100.00%		F1RIJ5              	100.00%
Bootstrap support for F6SZQ5 as seed ortholog is 100%.
Bootstrap support for F1RIJ5 as seed ortholog is 100%.

Group of orthologs #2189. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 S.scrofa:338

F6RPW8              	100.00%		F1S084              	100.00%
Bootstrap support for F6RPW8 as seed ortholog is 100%.
Bootstrap support for F1S084 as seed ortholog is 100%.

Group of orthologs #2190. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 S.scrofa:338

F6VLQ0              	100.00%		F1SIL0              	100.00%
Bootstrap support for F6VLQ0 as seed ortholog is 100%.
Bootstrap support for F1SIL0 as seed ortholog is 100%.

Group of orthologs #2191. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 S.scrofa:338

F6VVA7              	100.00%		F1SSH9              	100.00%
Bootstrap support for F6VVA7 as seed ortholog is 100%.
Bootstrap support for F1SSH9 as seed ortholog is 100%.

Group of orthologs #2192. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 S.scrofa:338

F6WFK7              	100.00%		F1SUP1              	100.00%
Bootstrap support for F6WFK7 as seed ortholog is 100%.
Bootstrap support for F1SUP1 as seed ortholog is 100%.

Group of orthologs #2193. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 S.scrofa:338

H2XX27              	100.00%		F1S532              	100.00%
Bootstrap support for H2XX27 as seed ortholog is 100%.
Bootstrap support for F1S532 as seed ortholog is 100%.

Group of orthologs #2194. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:338

F6UF46              	100.00%		I3LVL9              	100.00%
Bootstrap support for F6UF46 as seed ortholog is 71%.
Alternative seed ortholog is F6QGB1 (26 bits away from this cluster)
Bootstrap support for I3LVL9 as seed ortholog is 100%.

Group of orthologs #2195. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 S.scrofa:246

H2Y256              	100.00%		I3LK91              	100.00%
Bootstrap support for H2Y256 as seed ortholog is 100%.
Bootstrap support for I3LK91 as seed ortholog is 100%.

Group of orthologs #2196. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:173

H2XY76              	100.00%		F2Z507              	100.00%
                    	       		F1RG36              	37.78%
Bootstrap support for H2XY76 as seed ortholog is 100%.
Bootstrap support for F2Z507 as seed ortholog is 100%.

Group of orthologs #2197. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 S.scrofa:337

F7A9D9              	100.00%		I3LUY3              	100.00%
                    	       		F1S0S9              	23.35%
Bootstrap support for F7A9D9 as seed ortholog is 100%.
Bootstrap support for I3LUY3 as seed ortholog is 100%.

Group of orthologs #2198. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 S.scrofa:337

F6SM68              	100.00%		F1RNJ3              	100.00%
Bootstrap support for F6SM68 as seed ortholog is 100%.
Bootstrap support for F1RNJ3 as seed ortholog is 100%.

Group of orthologs #2199. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 S.scrofa:337

F6ZYE8              	100.00%		F1SCS5              	100.00%
Bootstrap support for F6ZYE8 as seed ortholog is 100%.
Bootstrap support for F1SCS5 as seed ortholog is 100%.

Group of orthologs #2200. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 S.scrofa:337

Q1RLA5              	100.00%		F1RM65              	100.00%
Bootstrap support for Q1RLA5 as seed ortholog is 100%.
Bootstrap support for F1RM65 as seed ortholog is 100%.

Group of orthologs #2201. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 S.scrofa:64

F6YSL9              	100.00%		F1RW44              	100.00%
                    	       		F1SGF0              	26.78%
Bootstrap support for F6YSL9 as seed ortholog is 100%.
Bootstrap support for F1RW44 as seed ortholog is 38%.
Alternative seed ortholog is Q5PXT2 (64 bits away from this cluster)

Group of orthologs #2202. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 S.scrofa:336

H2XK39              	100.00%		F1RJ53              	100.00%
                    	       		F1RKG1              	27.95%
Bootstrap support for H2XK39 as seed ortholog is 100%.
Bootstrap support for F1RJ53 as seed ortholog is 100%.

Group of orthologs #2203. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 S.scrofa:336

F6S578              	100.00%		F1SA66              	100.00%
Bootstrap support for F6S578 as seed ortholog is 100%.
Bootstrap support for F1SA66 as seed ortholog is 100%.

Group of orthologs #2204. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 S.scrofa:336

F6W248              	100.00%		F1SGR0              	100.00%
Bootstrap support for F6W248 as seed ortholog is 100%.
Bootstrap support for F1SGR0 as seed ortholog is 100%.

Group of orthologs #2205. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 S.scrofa:269

F6YAA4              	100.00%		F1SGK9              	100.00%
Bootstrap support for F6YAA4 as seed ortholog is 100%.
Bootstrap support for F1SGK9 as seed ortholog is 100%.

Group of orthologs #2206. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 S.scrofa:336

F7B376              	100.00%		F1SS81              	100.00%
Bootstrap support for F7B376 as seed ortholog is 100%.
Bootstrap support for F1SS81 as seed ortholog is 100%.

Group of orthologs #2207. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 S.scrofa:280

F6T2X1              	100.00%		I3LR40              	100.00%
Bootstrap support for F6T2X1 as seed ortholog is 100%.
Bootstrap support for I3LR40 as seed ortholog is 100%.

Group of orthologs #2208. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 S.scrofa:336

H2XWF9              	100.00%		F1SFR0              	100.00%
Bootstrap support for H2XWF9 as seed ortholog is 100%.
Bootstrap support for F1SFR0 as seed ortholog is 100%.

Group of orthologs #2209. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 S.scrofa:335

F6PLY6              	100.00%		K7GN91              	100.00%
Bootstrap support for F6PLY6 as seed ortholog is 100%.
Bootstrap support for K7GN91 as seed ortholog is 100%.

Group of orthologs #2210. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 S.scrofa:335

F6RID7              	100.00%		Q29371              	100.00%
Bootstrap support for F6RID7 as seed ortholog is 100%.
Bootstrap support for Q29371 as seed ortholog is 100%.

Group of orthologs #2211. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 S.scrofa:334

F6U2A4              	100.00%		F1SB28              	100.00%
                    	       		F1STS2              	22.26%
Bootstrap support for F6U2A4 as seed ortholog is 100%.
Bootstrap support for F1SB28 as seed ortholog is 100%.

Group of orthologs #2212. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 S.scrofa:190

Q1RLB1              	100.00%		F1RTY9              	100.00%
                    	       		I3L5M6              	13.55%
Bootstrap support for Q1RLB1 as seed ortholog is 100%.
Bootstrap support for F1RTY9 as seed ortholog is 100%.

Group of orthologs #2213. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 S.scrofa:334

F6U8F8              	100.00%		I3LSM9              	100.00%
                    	       		F1SBA4              	13.23%
Bootstrap support for F6U8F8 as seed ortholog is 100%.
Bootstrap support for I3LSM9 as seed ortholog is 100%.

Group of orthologs #2214. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 S.scrofa:334

F7BFD3              	100.00%		F1RLY8              	100.00%
Bootstrap support for F7BFD3 as seed ortholog is 100%.
Bootstrap support for F1RLY8 as seed ortholog is 100%.

Group of orthologs #2215. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 S.scrofa:334

F7AWQ7              	100.00%		F1S9K3              	100.00%
Bootstrap support for F7AWQ7 as seed ortholog is 100%.
Bootstrap support for F1S9K3 as seed ortholog is 100%.

Group of orthologs #2216. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 S.scrofa:334

F7ASX2              	100.00%		F1SS19              	100.00%
Bootstrap support for F7ASX2 as seed ortholog is 100%.
Bootstrap support for F1SS19 as seed ortholog is 100%.

Group of orthologs #2217. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 S.scrofa:334

F6ZT40              	100.00%		I3LEL0              	100.00%
Bootstrap support for F6ZT40 as seed ortholog is 100%.
Bootstrap support for I3LEL0 as seed ortholog is 100%.

Group of orthologs #2218. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 S.scrofa:333

H2Y2N2              	100.00%		F1SLF9              	100.00%
                    	       		F1SCY8              	31.23%
Bootstrap support for H2Y2N2 as seed ortholog is 100%.
Bootstrap support for F1SLF9 as seed ortholog is 100%.

Group of orthologs #2219. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 S.scrofa:333

F7BA03              	100.00%		Q8SQ26              	100.00%
                    	       		F1RVB1              	66.12%
Bootstrap support for F7BA03 as seed ortholog is 100%.
Bootstrap support for Q8SQ26 as seed ortholog is 100%.

Group of orthologs #2220. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 S.scrofa:333

F6T4V8              	100.00%		F1RZQ3              	100.00%
Bootstrap support for F6T4V8 as seed ortholog is 100%.
Bootstrap support for F1RZQ3 as seed ortholog is 100%.

Group of orthologs #2221. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 S.scrofa:154

F6VPZ1              	100.00%		F1RR82              	100.00%
Bootstrap support for F6VPZ1 as seed ortholog is 100%.
Bootstrap support for F1RR82 as seed ortholog is 99%.

Group of orthologs #2222. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 S.scrofa:108

F6RC25              	100.00%		F1S9C9              	100.00%
Bootstrap support for F6RC25 as seed ortholog is 100%.
Bootstrap support for F1S9C9 as seed ortholog is 100%.

Group of orthologs #2223. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 S.scrofa:333

F6XXF0              	100.00%		I3L635              	100.00%
Bootstrap support for F6XXF0 as seed ortholog is 100%.
Bootstrap support for I3L635 as seed ortholog is 100%.

Group of orthologs #2224. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.scrofa:240

F6X4A8              	100.00%		K7GP28              	100.00%
Bootstrap support for F6X4A8 as seed ortholog is 99%.
Bootstrap support for K7GP28 as seed ortholog is 100%.

Group of orthologs #2225. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 S.scrofa:332

F6S5C8              	100.00%		I3L830              	100.00%
H2XPI4              	35.24%		
Bootstrap support for F6S5C8 as seed ortholog is 85%.
Bootstrap support for I3L830 as seed ortholog is 100%.

Group of orthologs #2226. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 S.scrofa:260

F7BC45              	100.00%		F1S7M1              	100.00%
                    	       		F1SP52              	35.05%
Bootstrap support for F7BC45 as seed ortholog is 100%.
Bootstrap support for F1S7M1 as seed ortholog is 100%.

Group of orthologs #2227. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 S.scrofa:332

F6Q4K7              	100.00%		F2Z5F5              	100.00%
Bootstrap support for F6Q4K7 as seed ortholog is 100%.
Bootstrap support for F2Z5F5 as seed ortholog is 100%.

Group of orthologs #2228. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.scrofa:150

F6UVY6              	100.00%		F1SIG9              	100.00%
Bootstrap support for F6UVY6 as seed ortholog is 100%.
Bootstrap support for F1SIG9 as seed ortholog is 99%.

Group of orthologs #2229. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 S.scrofa:332

H2XQV8              	100.00%		F1SBH5              	100.00%
Bootstrap support for H2XQV8 as seed ortholog is 100%.
Bootstrap support for F1SBH5 as seed ortholog is 100%.

Group of orthologs #2230. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 S.scrofa:332

F7BBJ6              	100.00%		F1SPR8              	100.00%
Bootstrap support for F7BBJ6 as seed ortholog is 100%.
Bootstrap support for F1SPR8 as seed ortholog is 100%.

Group of orthologs #2231. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 S.scrofa:223

F6YG52              	100.00%		I3LI00              	100.00%
Bootstrap support for F6YG52 as seed ortholog is 100%.
Bootstrap support for I3LI00 as seed ortholog is 99%.

Group of orthologs #2232. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.scrofa:106

H2XN55              	100.00%		F1SMI8              	100.00%
F6VY95              	44.05%		Q9TUQ3              	5.11%
F6T072              	31.33%		
F6T0A0              	17.43%		
F6R7P6              	16.84%		
H2XSN4              	7.07%		
F6T090              	6.71%		
Bootstrap support for H2XN55 as seed ortholog is 95%.
Bootstrap support for F1SMI8 as seed ortholog is 97%.

Group of orthologs #2233. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 S.scrofa:331

F6PMM3              	100.00%		F1RQB6              	100.00%
                    	       		I3LPH5              	28.62%
Bootstrap support for F6PMM3 as seed ortholog is 100%.
Bootstrap support for F1RQB6 as seed ortholog is 100%.

Group of orthologs #2234. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 S.scrofa:331

F6PQ74              	100.00%		F1RSM1              	100.00%
Bootstrap support for F6PQ74 as seed ortholog is 100%.
Bootstrap support for F1RSM1 as seed ortholog is 100%.

Group of orthologs #2235. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 S.scrofa:331

F6UCW1              	100.00%		F1RJI6              	100.00%
Bootstrap support for F6UCW1 as seed ortholog is 100%.
Bootstrap support for F1RJI6 as seed ortholog is 100%.

Group of orthologs #2236. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 S.scrofa:331

F6R012              	100.00%		F1RZ01              	100.00%
Bootstrap support for F6R012 as seed ortholog is 100%.
Bootstrap support for F1RZ01 as seed ortholog is 100%.

Group of orthologs #2237. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 S.scrofa:331

F6WBE1              	100.00%		F1S4X9              	100.00%
Bootstrap support for F6WBE1 as seed ortholog is 100%.
Bootstrap support for F1S4X9 as seed ortholog is 100%.

Group of orthologs #2238. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 S.scrofa:331

F6W6Y0              	100.00%		F1S5U4              	100.00%
Bootstrap support for F6W6Y0 as seed ortholog is 100%.
Bootstrap support for F1S5U4 as seed ortholog is 100%.

Group of orthologs #2239. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 S.scrofa:331

F6XIK1              	100.00%		F1SQ73              	100.00%
Bootstrap support for F6XIK1 as seed ortholog is 100%.
Bootstrap support for F1SQ73 as seed ortholog is 100%.

Group of orthologs #2240. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 S.scrofa:331

H2XX92              	100.00%		F1SM74              	100.00%
Bootstrap support for H2XX92 as seed ortholog is 100%.
Bootstrap support for F1SM74 as seed ortholog is 100%.

Group of orthologs #2241. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 S.scrofa:278

F6W7C2              	100.00%		F1RK06              	100.00%
                    	       		F1SQ75              	14.24%
                    	       		F1RWT4              	12.44%
                    	       		F1RMY1              	7.04%
Bootstrap support for F6W7C2 as seed ortholog is 100%.
Bootstrap support for F1RK06 as seed ortholog is 100%.

Group of orthologs #2242. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 S.scrofa:83

F6QZ03              	100.00%		F1S3E0              	100.00%
                    	       		F1SSH7              	100.00%
Bootstrap support for F6QZ03 as seed ortholog is 100%.
Bootstrap support for F1S3E0 as seed ortholog is 99%.
Bootstrap support for F1SSH7 as seed ortholog is 99%.

Group of orthologs #2243. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:276

F6PRI9              	100.00%		I3LR11              	100.00%
F6TYP3              	16.78%		
Bootstrap support for F6PRI9 as seed ortholog is 99%.
Bootstrap support for I3LR11 as seed ortholog is 100%.

Group of orthologs #2244. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 S.scrofa:330

F6XYV2              	100.00%		I3LAQ3              	100.00%
                    	       		F1RW13              	55.82%
Bootstrap support for F6XYV2 as seed ortholog is 100%.
Bootstrap support for I3LAQ3 as seed ortholog is 100%.

Group of orthologs #2245. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 S.scrofa:330

F6YGM8              	100.00%		I3LPZ9              	100.00%
                    	       		F1SB23              	17.20%
Bootstrap support for F6YGM8 as seed ortholog is 100%.
Bootstrap support for I3LPZ9 as seed ortholog is 100%.

Group of orthologs #2246. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 S.scrofa:330

F7A328              	100.00%		F1S7D6              	100.00%
Bootstrap support for F7A328 as seed ortholog is 100%.
Bootstrap support for F1S7D6 as seed ortholog is 100%.

Group of orthologs #2247. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 S.scrofa:274

F6UP66              	100.00%		I3LNY4              	100.00%
Bootstrap support for F6UP66 as seed ortholog is 100%.
Bootstrap support for I3LNY4 as seed ortholog is 100%.

Group of orthologs #2248. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 S.scrofa:330

F6WM99              	100.00%		I3LJZ9              	100.00%
Bootstrap support for F6WM99 as seed ortholog is 100%.
Bootstrap support for I3LJZ9 as seed ortholog is 100%.

Group of orthologs #2249. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 S.scrofa:330

H2XW62              	100.00%		I3LJ92              	100.00%
Bootstrap support for H2XW62 as seed ortholog is 100%.
Bootstrap support for I3LJ92 as seed ortholog is 100%.

Group of orthologs #2250. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 S.scrofa:329

F6VBT4              	100.00%		F1RT83              	100.00%
                    	       		I3LRQ4              	9.09%
Bootstrap support for F6VBT4 as seed ortholog is 100%.
Bootstrap support for F1RT83 as seed ortholog is 100%.

Group of orthologs #2251. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 S.scrofa:242

F6WGN7              	100.00%		F1SPG6              	100.00%
                    	       		I3LTU6              	42.60%
Bootstrap support for F6WGN7 as seed ortholog is 100%.
Bootstrap support for F1SPG6 as seed ortholog is 100%.

Group of orthologs #2252. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 S.scrofa:329

F6SFM0              	100.00%		F1RL23              	100.00%
Bootstrap support for F6SFM0 as seed ortholog is 100%.
Bootstrap support for F1RL23 as seed ortholog is 100%.

Group of orthologs #2253. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 S.scrofa:329

F6S593              	100.00%		F1RVW3              	100.00%
Bootstrap support for F6S593 as seed ortholog is 100%.
Bootstrap support for F1RVW3 as seed ortholog is 100%.

Group of orthologs #2254. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 S.scrofa:329

F6YIY8              	100.00%		F1RUW0              	100.00%
Bootstrap support for F6YIY8 as seed ortholog is 100%.
Bootstrap support for F1RUW0 as seed ortholog is 100%.

Group of orthologs #2255. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 S.scrofa:74

F6Y1X1              	100.00%		F1RYT3              	100.00%
Bootstrap support for F6Y1X1 as seed ortholog is 100%.
Bootstrap support for F1RYT3 as seed ortholog is 95%.

Group of orthologs #2256. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 S.scrofa:329

F6PQL4              	100.00%		F6Q2D2              	100.00%
Bootstrap support for F6PQL4 as seed ortholog is 100%.
Bootstrap support for F6Q2D2 as seed ortholog is 100%.

Group of orthologs #2257. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.scrofa:136

F6U7K8              	100.00%		F1SSV9              	100.00%
Bootstrap support for F6U7K8 as seed ortholog is 99%.
Bootstrap support for F1SSV9 as seed ortholog is 98%.

Group of orthologs #2258. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 S.scrofa:196

F7A082              	100.00%		I3LNT7              	100.00%
Bootstrap support for F7A082 as seed ortholog is 100%.
Bootstrap support for I3LNT7 as seed ortholog is 100%.

Group of orthologs #2259. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 S.scrofa:329

F6XZ31              	100.00%		Q0KKC2              	100.00%
Bootstrap support for F6XZ31 as seed ortholog is 100%.
Bootstrap support for Q0KKC2 as seed ortholog is 100%.

Group of orthologs #2260. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 S.scrofa:99

F6X5R6              	100.00%		F2Z5H9              	100.00%
                    	       		I3L687              	89.37%
                    	       		F1RG16              	58.47%
                    	       		I3L5T6              	24.42%
Bootstrap support for F6X5R6 as seed ortholog is 100%.
Bootstrap support for F2Z5H9 as seed ortholog is 99%.

Group of orthologs #2261. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 S.scrofa:328

H2XUT2              	100.00%		F1SJ09              	100.00%
                    	       		F1SHV4              	8.96%
Bootstrap support for H2XUT2 as seed ortholog is 100%.
Bootstrap support for F1SJ09 as seed ortholog is 100%.

Group of orthologs #2262. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.scrofa:214

F6RY16              	100.00%		F1RQC7              	100.00%
Bootstrap support for F6RY16 as seed ortholog is 99%.
Bootstrap support for F1RQC7 as seed ortholog is 100%.

Group of orthologs #2263. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.scrofa:201

F6Q0N1              	100.00%		F1S6G9              	100.00%
Bootstrap support for F6Q0N1 as seed ortholog is 100%.
Bootstrap support for F1S6G9 as seed ortholog is 100%.

Group of orthologs #2264. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 S.scrofa:150

F6XBY1              	100.00%		F1RWZ4              	100.00%
Bootstrap support for F6XBY1 as seed ortholog is 100%.
Bootstrap support for F1RWZ4 as seed ortholog is 100%.

Group of orthologs #2265. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 S.scrofa:328

F6TBB0              	100.00%		F1SB49              	100.00%
Bootstrap support for F6TBB0 as seed ortholog is 100%.
Bootstrap support for F1SB49 as seed ortholog is 100%.

Group of orthologs #2266. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 S.scrofa:328

H2XNI7              	100.00%		F1RFF8              	100.00%
Bootstrap support for H2XNI7 as seed ortholog is 100%.
Bootstrap support for F1RFF8 as seed ortholog is 100%.

Group of orthologs #2267. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.scrofa:328

F7AUJ8              	100.00%		F1RW31              	100.00%
Bootstrap support for F7AUJ8 as seed ortholog is 90%.
Bootstrap support for F1RW31 as seed ortholog is 100%.

Group of orthologs #2268. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 S.scrofa:328

F6ZPY9              	100.00%		F1STN0              	100.00%
Bootstrap support for F6ZPY9 as seed ortholog is 99%.
Bootstrap support for F1STN0 as seed ortholog is 100%.

Group of orthologs #2269. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 S.scrofa:328

H2XWZ5              	100.00%		I3LPB2              	100.00%
Bootstrap support for H2XWZ5 as seed ortholog is 100%.
Bootstrap support for I3LPB2 as seed ortholog is 100%.

Group of orthologs #2270. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.scrofa:211

F6R8N5              	100.00%		F1SLE8              	100.00%
                    	       		F1SC83              	9.67%
                    	       		F1SC84              	5.34%
Bootstrap support for F6R8N5 as seed ortholog is 89%.
Bootstrap support for F1SLE8 as seed ortholog is 99%.

Group of orthologs #2271. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.scrofa:64

F6WIM7              	100.00%		C0MP43              	100.00%
                    	       		F1RJV4              	66.67%
Bootstrap support for F6WIM7 as seed ortholog is 94%.
Bootstrap support for C0MP43 as seed ortholog is 90%.

Group of orthologs #2272. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 S.scrofa:327

F6YJ10              	100.00%		F1RXB3              	100.00%
                    	       		F1RXA9              	99.45%
Bootstrap support for F6YJ10 as seed ortholog is 100%.
Bootstrap support for F1RXB3 as seed ortholog is 100%.

Group of orthologs #2273. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 S.scrofa:327

H2XUQ0              	100.00%		F1REX3              	100.00%
                    	       		I3LCK9              	73.64%
Bootstrap support for H2XUQ0 as seed ortholog is 100%.
Bootstrap support for F1REX3 as seed ortholog is 100%.

Group of orthologs #2274. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 S.scrofa:176

F6W9C9              	100.00%		Q29221              	100.00%
                    	       		F6Q4Y6              	22.96%
Bootstrap support for F6W9C9 as seed ortholog is 100%.
Bootstrap support for Q29221 as seed ortholog is 99%.

Group of orthologs #2275. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 S.scrofa:327

F7AP04              	100.00%		F1RK61              	100.00%
Bootstrap support for F7AP04 as seed ortholog is 100%.
Bootstrap support for F1RK61 as seed ortholog is 100%.

Group of orthologs #2276. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 S.scrofa:327

F6XFZ5              	100.00%		F1RXV9              	100.00%
Bootstrap support for F6XFZ5 as seed ortholog is 100%.
Bootstrap support for F1RXV9 as seed ortholog is 100%.

Group of orthologs #2277. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 S.scrofa:327

F6ZK14              	100.00%		F1RRQ5              	100.00%
Bootstrap support for F6ZK14 as seed ortholog is 100%.
Bootstrap support for F1RRQ5 as seed ortholog is 100%.

Group of orthologs #2278. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 S.scrofa:327

F6VI10              	100.00%		F1STB5              	100.00%
Bootstrap support for F6VI10 as seed ortholog is 100%.
Bootstrap support for F1STB5 as seed ortholog is 100%.

Group of orthologs #2279. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:87

F6ZRE8              	100.00%		I3LAZ3              	100.00%
Bootstrap support for F6ZRE8 as seed ortholog is 100%.
Bootstrap support for I3LAZ3 as seed ortholog is 99%.

Group of orthologs #2280. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 S.scrofa:327

H2XXA8              	100.00%		F1SSW1              	100.00%
Bootstrap support for H2XXA8 as seed ortholog is 100%.
Bootstrap support for F1SSW1 as seed ortholog is 100%.

Group of orthologs #2281. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 S.scrofa:327

H2XN21              	100.00%		O19071              	100.00%
Bootstrap support for H2XN21 as seed ortholog is 100%.
Bootstrap support for O19071 as seed ortholog is 100%.

Group of orthologs #2282. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 S.scrofa:91

F7B2X5              	100.00%		F1S3D5              	100.00%
                    	       		I3LJD2              	9.61%
Bootstrap support for F7B2X5 as seed ortholog is 100%.
Bootstrap support for F1S3D5 as seed ortholog is 99%.

Group of orthologs #2283. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 S.scrofa:326

F6SDU1              	100.00%		F1RKI9              	100.00%
Bootstrap support for F6SDU1 as seed ortholog is 100%.
Bootstrap support for F1RKI9 as seed ortholog is 100%.

Group of orthologs #2284. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 S.scrofa:326

F6WRB6              	100.00%		F1RP00              	100.00%
Bootstrap support for F6WRB6 as seed ortholog is 100%.
Bootstrap support for F1RP00 as seed ortholog is 100%.

Group of orthologs #2285. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 S.scrofa:326

F6WYU9              	100.00%		F1S0B3              	100.00%
Bootstrap support for F6WYU9 as seed ortholog is 100%.
Bootstrap support for F1S0B3 as seed ortholog is 100%.

Group of orthologs #2286. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 S.scrofa:66

F6QQZ3              	100.00%		F1SQ01              	100.00%
Bootstrap support for F6QQZ3 as seed ortholog is 98%.
Bootstrap support for F1SQ01 as seed ortholog is 99%.

Group of orthologs #2287. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 S.scrofa:195

F6Z1B8              	100.00%		Q0MVN8              	100.00%
Bootstrap support for F6Z1B8 as seed ortholog is 100%.
Bootstrap support for Q0MVN8 as seed ortholog is 100%.

Group of orthologs #2288. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:82

F7A5W3              	100.00%		Q0GA84              	100.00%
Bootstrap support for F7A5W3 as seed ortholog is 100%.
Bootstrap support for Q0GA84 as seed ortholog is 99%.

Group of orthologs #2289. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 S.scrofa:163

H2XS39              	100.00%		K7GMV8              	100.00%
Bootstrap support for H2XS39 as seed ortholog is 100%.
Bootstrap support for K7GMV8 as seed ortholog is 99%.

Group of orthologs #2290. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 S.scrofa:154

L7N0U6              	100.00%		F1RGV4              	100.00%
F6PS78              	98.86%		
Bootstrap support for L7N0U6 as seed ortholog is 100%.
Bootstrap support for F1RGV4 as seed ortholog is 100%.

Group of orthologs #2291. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 S.scrofa:239

F6SBQ3              	100.00%		I3LN34              	100.00%
                    	       		I3L8H8              	45.39%
Bootstrap support for F6SBQ3 as seed ortholog is 100%.
Bootstrap support for I3LN34 as seed ortholog is 99%.

Group of orthologs #2292. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 S.scrofa:325

F6RZ52              	100.00%		F1SKZ3              	100.00%
Bootstrap support for F6RZ52 as seed ortholog is 100%.
Bootstrap support for F1SKZ3 as seed ortholog is 100%.

Group of orthologs #2293. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 S.scrofa:147

F6XH93              	100.00%		I3L6T0              	100.00%
Bootstrap support for F6XH93 as seed ortholog is 100%.
Bootstrap support for I3L6T0 as seed ortholog is 100%.

Group of orthologs #2294. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 S.scrofa:325

H2XPH6              	100.00%		F1SIE7              	100.00%
Bootstrap support for H2XPH6 as seed ortholog is 100%.
Bootstrap support for F1SIE7 as seed ortholog is 100%.

Group of orthologs #2295. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 S.scrofa:325

H2XW51              	100.00%		I3LK60              	100.00%
Bootstrap support for H2XW51 as seed ortholog is 100%.
Bootstrap support for I3LK60 as seed ortholog is 100%.

Group of orthologs #2296. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 S.scrofa:324

F6V2L0              	100.00%		F1RGK9              	100.00%
                    	       		I3LQ83              	88.46%
                    	       		I3L5C7              	41.71%
                    	       		F1SEA5              	11.66%
Bootstrap support for F6V2L0 as seed ortholog is 100%.
Bootstrap support for F1RGK9 as seed ortholog is 100%.

Group of orthologs #2297. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:75

F6S1S7              	100.00%		F2Z560              	100.00%
                    	       		Q06AU6              	42.99%
                    	       		I3LFZ8              	30.84%
Bootstrap support for F6S1S7 as seed ortholog is 100%.
Bootstrap support for F2Z560 as seed ortholog is 99%.

Group of orthologs #2298. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:151

F6TGU6              	100.00%		A5GHK9              	100.00%
                    	       		I3L9Z5              	20.78%
Bootstrap support for F6TGU6 as seed ortholog is 99%.
Bootstrap support for A5GHK9 as seed ortholog is 99%.

Group of orthologs #2299. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 S.scrofa:324

F6UTA8              	100.00%		F1RFZ7              	100.00%
                    	       		F1RVY9              	12.93%
Bootstrap support for F6UTA8 as seed ortholog is 100%.
Bootstrap support for F1RFZ7 as seed ortholog is 100%.

Group of orthologs #2300. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.scrofa:153

F6YH77              	100.00%		A1X898              	100.00%
                    	       		I3L769              	49.93%
Bootstrap support for F6YH77 as seed ortholog is 96%.
Bootstrap support for A1X898 as seed ortholog is 99%.

Group of orthologs #2301. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:103

F6ZHF5              	100.00%		I3LVH1              	100.00%
                    	       		F1SPG8              	72.48%
Bootstrap support for F6ZHF5 as seed ortholog is 99%.
Bootstrap support for I3LVH1 as seed ortholog is 99%.

Group of orthologs #2302. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 S.scrofa:324

F6TI55              	100.00%		F1RK95              	100.00%
Bootstrap support for F6TI55 as seed ortholog is 100%.
Bootstrap support for F1RK95 as seed ortholog is 100%.

Group of orthologs #2303. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 S.scrofa:324

F6YXK3              	100.00%		F1RIK3              	100.00%
Bootstrap support for F6YXK3 as seed ortholog is 100%.
Bootstrap support for F1RIK3 as seed ortholog is 100%.

Group of orthologs #2304. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 S.scrofa:324

F6YLQ9              	100.00%		F1S781              	100.00%
Bootstrap support for F6YLQ9 as seed ortholog is 100%.
Bootstrap support for F1S781 as seed ortholog is 100%.

Group of orthologs #2305. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 S.scrofa:324

F6Z326              	100.00%		I3L883              	100.00%
Bootstrap support for F6Z326 as seed ortholog is 100%.
Bootstrap support for I3L883 as seed ortholog is 100%.

Group of orthologs #2306. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 S.scrofa:324

F6YIU9              	100.00%		I3LL57              	100.00%
Bootstrap support for F6YIU9 as seed ortholog is 100%.
Bootstrap support for I3LL57 as seed ortholog is 100%.

Group of orthologs #2307. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.scrofa:68

F6VVP4              	100.00%		I3LH37              	100.00%
F6PS87              	31.92%		O62640              	7.26%
F6VVK4              	27.02%		
F7BMK2              	11.59%		
Bootstrap support for F6VVP4 as seed ortholog is 93%.
Bootstrap support for I3LH37 as seed ortholog is 81%.

Group of orthologs #2308. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.scrofa:118

F6PM82              	100.00%		Q06AT0              	100.00%
                    	       		Q06AT1              	64.79%
                    	       		F2Z561              	60.56%
Bootstrap support for F6PM82 as seed ortholog is 100%.
Bootstrap support for Q06AT0 as seed ortholog is 100%.

Group of orthologs #2309. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 S.scrofa:246

F6YGZ1              	100.00%		F1RG42              	100.00%
                    	       		F1S845              	12.56%
Bootstrap support for F6YGZ1 as seed ortholog is 100%.
Bootstrap support for F1RG42 as seed ortholog is 100%.

Group of orthologs #2310. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.scrofa:231

Q4H2Q6              	100.00%		I3LNA4              	100.00%
                    	       		I3LE28              	64.38%
Bootstrap support for Q4H2Q6 as seed ortholog is 100%.
Bootstrap support for I3LNA4 as seed ortholog is 100%.

Group of orthologs #2311. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 S.scrofa:323

F6QBE1              	100.00%		F1S436              	100.00%
Bootstrap support for F6QBE1 as seed ortholog is 100%.
Bootstrap support for F1S436 as seed ortholog is 100%.

Group of orthologs #2312. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 S.scrofa:98

F6ZSP8              	100.00%		F1SAX0              	100.00%
Bootstrap support for F6ZSP8 as seed ortholog is 71%.
Alternative seed ortholog is F6TMW8 (24 bits away from this cluster)
Bootstrap support for F1SAX0 as seed ortholog is 99%.

Group of orthologs #2313. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.scrofa:148

K9J6P5              	100.00%		F1RG29              	100.00%
F7AYD9              	60.48%		
Bootstrap support for K9J6P5 as seed ortholog is 100%.
Bootstrap support for F1RG29 as seed ortholog is 100%.

Group of orthologs #2314. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 S.scrofa:322

H2XVA2              	100.00%		F1S245              	100.00%
                    	       		I3LA76              	100.00%
Bootstrap support for H2XVA2 as seed ortholog is 100%.
Bootstrap support for F1S245 as seed ortholog is 100%.
Bootstrap support for I3LA76 as seed ortholog is 100%.

Group of orthologs #2315. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 S.scrofa:245

F6W282              	100.00%		F1S8H5              	100.00%
Bootstrap support for F6W282 as seed ortholog is 100%.
Bootstrap support for F1S8H5 as seed ortholog is 100%.

Group of orthologs #2316. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.scrofa:193

F6YMG8              	100.00%		F1S1Z0              	100.00%
Bootstrap support for F6YMG8 as seed ortholog is 100%.
Bootstrap support for F1S1Z0 as seed ortholog is 100%.

Group of orthologs #2317. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 S.scrofa:322

F6YUQ8              	100.00%		F1S7L9              	100.00%
Bootstrap support for F6YUQ8 as seed ortholog is 100%.
Bootstrap support for F1S7L9 as seed ortholog is 100%.

Group of orthologs #2318. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 S.scrofa:322

F6UJD6              	100.00%		F1SND4              	100.00%
Bootstrap support for F6UJD6 as seed ortholog is 100%.
Bootstrap support for F1SND4 as seed ortholog is 100%.

Group of orthologs #2319. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 S.scrofa:322

F6PLX9              	100.00%		Q00P49              	100.00%
Bootstrap support for F6PLX9 as seed ortholog is 100%.
Bootstrap support for Q00P49 as seed ortholog is 100%.

Group of orthologs #2320. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 S.scrofa:81

H2XRT7              	100.00%		F1S7C1              	100.00%
F6ZNW9              	79.06%		I3L9H9              	74.55%
F6TL65              	30.93%		F1S7Z0              	56.17%
F7BB38              	30.79%		I3LVE6              	32.52%
F7A0M9              	17.48%		F1S984              	10.15%
                    	       		F1S8V6              	9.51%
                    	       		P79383              	7.71%
                    	       		F1SC62              	7.71%
                    	       		O46658              	6.43%
Bootstrap support for H2XRT7 as seed ortholog is 67%.
Alternative seed ortholog is F6W8H6 (22 bits away from this cluster)
Bootstrap support for F1S7C1 as seed ortholog is 98%.

Group of orthologs #2321. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.scrofa:196

F6TIL4              	100.00%		A5GFN2              	100.00%
                    	       		F1RW73              	35.63%
                    	       		F1RZW7              	21.34%
                    	       		F1SV10              	11.99%
Bootstrap support for F6TIL4 as seed ortholog is 99%.
Bootstrap support for A5GFN2 as seed ortholog is 100%.

Group of orthologs #2322. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:59

F6YI37              	100.00%		P09955              	100.00%
F6ST69              	21.87%		K7GM46              	7.04%
Bootstrap support for F6YI37 as seed ortholog is 98%.
Bootstrap support for P09955 as seed ortholog is 93%.

Group of orthologs #2323. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 S.scrofa:321

F6SYP3              	100.00%		F1RR47              	100.00%
                    	       		I3L6C0              	10.05%
Bootstrap support for F6SYP3 as seed ortholog is 100%.
Bootstrap support for F1RR47 as seed ortholog is 100%.

Group of orthologs #2324. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 S.scrofa:238

F6PKP1              	100.00%		F1S890              	100.00%
                    	       		I3LF60              	18.82%
Bootstrap support for F6PKP1 as seed ortholog is 100%.
Bootstrap support for F1S890 as seed ortholog is 100%.

Group of orthologs #2325. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 S.scrofa:321

F6VIA9              	100.00%		F1SHD6              	100.00%
                    	       		P29412              	20.45%
Bootstrap support for F6VIA9 as seed ortholog is 100%.
Bootstrap support for F1SHD6 as seed ortholog is 100%.

Group of orthologs #2326. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 S.scrofa:89

F6THX7              	100.00%		F1RH59              	100.00%
Bootstrap support for F6THX7 as seed ortholog is 100%.
Bootstrap support for F1RH59 as seed ortholog is 81%.

Group of orthologs #2327. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 S.scrofa:321

F6SLC8              	100.00%		F1S062              	100.00%
Bootstrap support for F6SLC8 as seed ortholog is 100%.
Bootstrap support for F1S062 as seed ortholog is 100%.

Group of orthologs #2328. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 S.scrofa:182

F6PIZ2              	100.00%		F1SKK1              	100.00%
Bootstrap support for F6PIZ2 as seed ortholog is 100%.
Bootstrap support for F1SKK1 as seed ortholog is 100%.

Group of orthologs #2329. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 S.scrofa:321

F6QAK1              	100.00%		F1SKQ2              	100.00%
Bootstrap support for F6QAK1 as seed ortholog is 100%.
Bootstrap support for F1SKQ2 as seed ortholog is 100%.

Group of orthologs #2330. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 S.scrofa:185

F6VHJ0              	100.00%		F1SDJ3              	100.00%
Bootstrap support for F6VHJ0 as seed ortholog is 100%.
Bootstrap support for F1SDJ3 as seed ortholog is 100%.

Group of orthologs #2331. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 S.scrofa:321

F6VH72              	100.00%		F1SFN0              	100.00%
Bootstrap support for F6VH72 as seed ortholog is 100%.
Bootstrap support for F1SFN0 as seed ortholog is 100%.

Group of orthologs #2332. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 S.scrofa:321

F6R035              	100.00%		I3LJS5              	100.00%
Bootstrap support for F6R035 as seed ortholog is 100%.
Bootstrap support for I3LJS5 as seed ortholog is 100%.

Group of orthologs #2333. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 S.scrofa:321

F6XPZ4              	100.00%		I3L7Z5              	100.00%
Bootstrap support for F6XPZ4 as seed ortholog is 100%.
Bootstrap support for I3L7Z5 as seed ortholog is 100%.

Group of orthologs #2334. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:160

F6ZHC8              	100.00%		I3LFK5              	100.00%
Bootstrap support for F6ZHC8 as seed ortholog is 100%.
Bootstrap support for I3LFK5 as seed ortholog is 100%.

Group of orthologs #2335. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 S.scrofa:320

F6VF67              	100.00%		F1S8S5              	100.00%
Bootstrap support for F6VF67 as seed ortholog is 100%.
Bootstrap support for F1S8S5 as seed ortholog is 100%.

Group of orthologs #2336. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.scrofa:320

F6W1X7              	100.00%		F1S8R2              	100.00%
Bootstrap support for F6W1X7 as seed ortholog is 99%.
Bootstrap support for F1S8R2 as seed ortholog is 100%.

Group of orthologs #2337. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.scrofa:97

F6X7Y3              	100.00%		F1SE74              	100.00%
Bootstrap support for F6X7Y3 as seed ortholog is 97%.
Bootstrap support for F1SE74 as seed ortholog is 99%.

Group of orthologs #2338. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 S.scrofa:320

F6VLR0              	100.00%		F1SRE6              	100.00%
Bootstrap support for F6VLR0 as seed ortholog is 100%.
Bootstrap support for F1SRE6 as seed ortholog is 100%.

Group of orthologs #2339. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.scrofa:35

F6Z255              	100.00%		F2Z5F2              	100.00%
Bootstrap support for F6Z255 as seed ortholog is 100%.
Bootstrap support for F2Z5F2 as seed ortholog is 94%.

Group of orthologs #2340. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 S.scrofa:170

H2Y079              	100.00%		F1S041              	100.00%
Bootstrap support for H2Y079 as seed ortholog is 100%.
Bootstrap support for F1S041 as seed ortholog is 99%.

Group of orthologs #2341. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.scrofa:67

H2XRT9              	100.00%		K7GLQ3              	100.00%
                    	       		I3LM95              	24.35%
                    	       		I3L814              	13.02%
                    	       		I3LRN8              	11.00%
Bootstrap support for H2XRT9 as seed ortholog is 99%.
Bootstrap support for K7GLQ3 as seed ortholog is 87%.

Group of orthologs #2342. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 S.scrofa:22

F7AFI4              	100.00%		F1RS27              	100.00%
F6YCJ4              	60.92%		
F6YGS0              	33.19%		
Bootstrap support for F7AFI4 as seed ortholog is 100%.
Bootstrap support for F1RS27 as seed ortholog is 98%.

Group of orthologs #2343. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 S.scrofa:319

F6VKM8              	100.00%		F1S1A3              	100.00%
                    	       		F1S1A4              	36.49%
Bootstrap support for F6VKM8 as seed ortholog is 100%.
Bootstrap support for F1S1A3 as seed ortholog is 100%.

Group of orthologs #2344. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:256

F6W4G9              	100.00%		F2Z5F9              	100.00%
                    	       		F1SF34              	27.58%
Bootstrap support for F6W4G9 as seed ortholog is 100%.
Bootstrap support for F2Z5F9 as seed ortholog is 100%.

Group of orthologs #2345. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 S.scrofa:86

F6RUS9              	100.00%		F1S2N5              	100.00%
Bootstrap support for F6RUS9 as seed ortholog is 100%.
Bootstrap support for F1S2N5 as seed ortholog is 99%.

Group of orthologs #2346. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:182

F6XF88              	100.00%		F1RZP8              	100.00%
Bootstrap support for F6XF88 as seed ortholog is 100%.
Bootstrap support for F1RZP8 as seed ortholog is 100%.

Group of orthologs #2347. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 S.scrofa:319

H2XSN5              	100.00%		F1RK68              	100.00%
Bootstrap support for H2XSN5 as seed ortholog is 100%.
Bootstrap support for F1RK68 as seed ortholog is 100%.

Group of orthologs #2348. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.scrofa:319

Q1RPZ3              	100.00%		D3K5M8              	100.00%
Bootstrap support for Q1RPZ3 as seed ortholog is 96%.
Bootstrap support for D3K5M8 as seed ortholog is 100%.

Group of orthologs #2349. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.scrofa:174

F7AHE1              	100.00%		F1SH25              	100.00%
Bootstrap support for F7AHE1 as seed ortholog is 100%.
Bootstrap support for F1SH25 as seed ortholog is 100%.

Group of orthologs #2350. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 S.scrofa:319

F7BEV9              	100.00%		F1SNY4              	100.00%
Bootstrap support for F7BEV9 as seed ortholog is 100%.
Bootstrap support for F1SNY4 as seed ortholog is 100%.

Group of orthologs #2351. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 S.scrofa:319

H2XUU5              	100.00%		F1SAB0              	100.00%
Bootstrap support for H2XUU5 as seed ortholog is 100%.
Bootstrap support for F1SAB0 as seed ortholog is 100%.

Group of orthologs #2352. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.scrofa:58

F6WL19              	100.00%		F2Z558              	100.00%
F6TNW3              	24.18%		F1SDR7              	60.36%
                    	       		F1SA98              	47.93%
                    	       		F2Z4Z1              	21.89%
                    	       		F2Z4Y1              	21.30%
                    	       		F1STR9              	12.43%
Bootstrap support for F6WL19 as seed ortholog is 99%.
Bootstrap support for F2Z558 as seed ortholog is 98%.

Group of orthologs #2353. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:62

F6Z145              	100.00%		F2Z5B4              	100.00%
F7B1Z2              	17.33%		F1RX74              	32.33%
                    	       		Q06A94              	28.11%
                    	       		F1SA35              	15.26%
                    	       		F1SCM6              	12.25%
                    	       		F1SCL3              	12.05%
Bootstrap support for F6Z145 as seed ortholog is 94%.
Bootstrap support for F2Z5B4 as seed ortholog is 99%.

Group of orthologs #2354. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.scrofa:80

Q4H2M5              	100.00%		I3LBV3              	100.00%
                    	       		F1RRR3              	40.23%
Bootstrap support for Q4H2M5 as seed ortholog is 99%.
Bootstrap support for I3LBV3 as seed ortholog is 98%.

Group of orthologs #2355. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 S.scrofa:318

F6YQB2              	100.00%		F1RHW0              	100.00%
Bootstrap support for F6YQB2 as seed ortholog is 100%.
Bootstrap support for F1RHW0 as seed ortholog is 100%.

Group of orthologs #2356. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 S.scrofa:318

F7AH61              	100.00%		F1RGB4              	100.00%
Bootstrap support for F7AH61 as seed ortholog is 100%.
Bootstrap support for F1RGB4 as seed ortholog is 100%.

Group of orthologs #2357. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 S.scrofa:318

F6TJ64              	100.00%		F1SJ05              	100.00%
Bootstrap support for F6TJ64 as seed ortholog is 100%.
Bootstrap support for F1SJ05 as seed ortholog is 100%.

Group of orthologs #2358. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 S.scrofa:318

F6TI75              	100.00%		I3L8D0              	100.00%
Bootstrap support for F6TI75 as seed ortholog is 100%.
Bootstrap support for I3L8D0 as seed ortholog is 100%.

Group of orthologs #2359. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 S.scrofa:317

F6RCC2              	100.00%		I3LS60              	100.00%
I6L237              	95.94%		I3LCS2              	45.23%
Bootstrap support for F6RCC2 as seed ortholog is 100%.
Bootstrap support for I3LS60 as seed ortholog is 100%.

Group of orthologs #2360. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 S.scrofa:317

F6WIW4              	100.00%		F1RN38              	100.00%
                    	       		I3LPT0              	26.09%
Bootstrap support for F6WIW4 as seed ortholog is 100%.
Bootstrap support for F1RN38 as seed ortholog is 100%.

Group of orthologs #2361. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 S.scrofa:211

F6UQ99              	100.00%		F1S8W4              	100.00%
                    	       		F1RM89              	21.71%
Bootstrap support for F6UQ99 as seed ortholog is 100%.
Bootstrap support for F1S8W4 as seed ortholog is 100%.

Group of orthologs #2362. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 S.scrofa:317

F6VKZ4              	100.00%		F1RX78              	100.00%
Bootstrap support for F6VKZ4 as seed ortholog is 100%.
Bootstrap support for F1RX78 as seed ortholog is 100%.

Group of orthologs #2363. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 S.scrofa:317

F6VD90              	100.00%		F1S089              	100.00%
Bootstrap support for F6VD90 as seed ortholog is 100%.
Bootstrap support for F1S089 as seed ortholog is 100%.

Group of orthologs #2364. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 S.scrofa:266

F6TVY6              	100.00%		F1SGV6              	100.00%
Bootstrap support for F6TVY6 as seed ortholog is 100%.
Bootstrap support for F1SGV6 as seed ortholog is 100%.

Group of orthologs #2365. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 S.scrofa:317

F6XWZ8              	100.00%		F1S484              	100.00%
Bootstrap support for F6XWZ8 as seed ortholog is 100%.
Bootstrap support for F1S484 as seed ortholog is 100%.

Group of orthologs #2366. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 S.scrofa:191

F6RYH5              	100.00%		I3LBQ4              	100.00%
Bootstrap support for F6RYH5 as seed ortholog is 100%.
Bootstrap support for I3LBQ4 as seed ortholog is 99%.

Group of orthologs #2367. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.scrofa:153

H2Y0Z7              	100.00%		P79401              	100.00%
H2XPY7              	62.04%		I3LEX8              	32.76%
H2Y2K3              	53.36%		
H2XVE2              	27.59%		
Bootstrap support for H2Y0Z7 as seed ortholog is 99%.
Bootstrap support for P79401 as seed ortholog is 99%.

Group of orthologs #2368. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.scrofa:316

F6UG73              	100.00%		I3LNE1              	100.00%
                    	       		F1SJI5              	18.13%
                    	       		I3LUF5              	8.44%
Bootstrap support for F6UG73 as seed ortholog is 100%.
Bootstrap support for I3LNE1 as seed ortholog is 100%.

Group of orthologs #2369. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 S.scrofa:316

F6WEK5              	100.00%		F1RG21              	100.00%
                    	       		F1SE46              	43.40%
Bootstrap support for F6WEK5 as seed ortholog is 100%.
Bootstrap support for F1RG21 as seed ortholog is 100%.

Group of orthologs #2370. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:316

H2XKH3              	100.00%		F1S054              	100.00%
                    	       		D2IE28              	14.07%
Bootstrap support for H2XKH3 as seed ortholog is 99%.
Bootstrap support for F1S054 as seed ortholog is 100%.

Group of orthologs #2371. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.scrofa:316

H2XVS3              	100.00%		F1RRH9              	100.00%
                    	       		I3L6G5              	27.68%
Bootstrap support for H2XVS3 as seed ortholog is 100%.
Bootstrap support for F1RRH9 as seed ortholog is 100%.

Group of orthologs #2372. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.scrofa:193

F6VQ38              	100.00%		I3LLF0              	100.00%
                    	       		I3L7Y3              	34.36%
Bootstrap support for F6VQ38 as seed ortholog is 99%.
Bootstrap support for I3LLF0 as seed ortholog is 100%.

Group of orthologs #2373. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:316

F7AK04              	100.00%		I3LKY3              	100.00%
                    	       		F1SHR6              	57.69%
Bootstrap support for F7AK04 as seed ortholog is 92%.
Bootstrap support for I3LKY3 as seed ortholog is 100%.

Group of orthologs #2374. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.scrofa:316

F6RTY1              	100.00%		F1RK78              	100.00%
Bootstrap support for F6RTY1 as seed ortholog is 100%.
Bootstrap support for F1RK78 as seed ortholog is 100%.

Group of orthologs #2375. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.scrofa:316

F6R046              	100.00%		F1SLE3              	100.00%
Bootstrap support for F6R046 as seed ortholog is 100%.
Bootstrap support for F1SLE3 as seed ortholog is 100%.

Group of orthologs #2376. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.scrofa:316

F6TVB5              	100.00%		F1SIM1              	100.00%
Bootstrap support for F6TVB5 as seed ortholog is 100%.
Bootstrap support for F1SIM1 as seed ortholog is 100%.

Group of orthologs #2377. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.scrofa:316

F6ZN43              	100.00%		F1RZT3              	100.00%
Bootstrap support for F6ZN43 as seed ortholog is 100%.
Bootstrap support for F1RZT3 as seed ortholog is 100%.

Group of orthologs #2378. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.scrofa:316

H2Y152              	100.00%		F1RJ62              	100.00%
Bootstrap support for H2Y152 as seed ortholog is 100%.
Bootstrap support for F1RJ62 as seed ortholog is 100%.

Group of orthologs #2379. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.scrofa:316

F6Q196              	100.00%		I3LLU2              	100.00%
Bootstrap support for F6Q196 as seed ortholog is 99%.
Bootstrap support for I3LLU2 as seed ortholog is 100%.

Group of orthologs #2380. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.scrofa:316

H2XLX0              	100.00%		F1S9Z2              	100.00%
Bootstrap support for H2XLX0 as seed ortholog is 100%.
Bootstrap support for F1S9Z2 as seed ortholog is 100%.

Group of orthologs #2381. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.scrofa:316

F7AEV2              	100.00%		F1SS01              	100.00%
Bootstrap support for F7AEV2 as seed ortholog is 100%.
Bootstrap support for F1SS01 as seed ortholog is 100%.

Group of orthologs #2382. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 S.scrofa:316

F6Y886              	100.00%		I3LER2              	100.00%
Bootstrap support for F6Y886 as seed ortholog is 100%.
Bootstrap support for I3LER2 as seed ortholog is 100%.

Group of orthologs #2383. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.scrofa:64

F6VCD8              	100.00%		Q3YLA6              	100.00%
Bootstrap support for F6VCD8 as seed ortholog is 100%.
Bootstrap support for Q3YLA6 as seed ortholog is 91%.

Group of orthologs #2384. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 S.scrofa:315

F6VF91              	100.00%		F1RT08              	100.00%
Bootstrap support for F6VF91 as seed ortholog is 100%.
Bootstrap support for F1RT08 as seed ortholog is 100%.

Group of orthologs #2385. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.scrofa:102

F6X3P0              	100.00%		F1S3W5              	100.00%
Bootstrap support for F6X3P0 as seed ortholog is 100%.
Bootstrap support for F1S3W5 as seed ortholog is 99%.

Group of orthologs #2386. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 S.scrofa:315

F7BHG2              	100.00%		F1SJF6              	100.00%
Bootstrap support for F7BHG2 as seed ortholog is 99%.
Bootstrap support for F1SJF6 as seed ortholog is 100%.

Group of orthologs #2387. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:118

F6WPT0              	100.00%		P79387              	100.00%
Bootstrap support for F6WPT0 as seed ortholog is 100%.
Bootstrap support for P79387 as seed ortholog is 63%.
Alternative seed ortholog is F1S962 (118 bits away from this cluster)

Group of orthologs #2388. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 S.scrofa:315

H2Y1K5              	100.00%		F1SP51              	100.00%
Bootstrap support for H2Y1K5 as seed ortholog is 100%.
Bootstrap support for F1SP51 as seed ortholog is 100%.

Group of orthologs #2389. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 S.scrofa:315

H2Y345              	100.00%		I3LAZ7              	100.00%
Bootstrap support for H2Y345 as seed ortholog is 100%.
Bootstrap support for I3LAZ7 as seed ortholog is 100%.

Group of orthologs #2390. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.scrofa:314

F6QST8              	100.00%		F1SN63              	100.00%
                    	       		F1SA50              	8.58%
Bootstrap support for F6QST8 as seed ortholog is 100%.
Bootstrap support for F1SN63 as seed ortholog is 100%.

Group of orthologs #2391. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 S.scrofa:314

F6S3Q7              	100.00%		Q9GL01              	100.00%
                    	       		I3LLF2              	40.31%
Bootstrap support for F6S3Q7 as seed ortholog is 100%.
Bootstrap support for Q9GL01 as seed ortholog is 100%.

Group of orthologs #2392. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 S.scrofa:247

F6PWM6              	100.00%		F1SAQ4              	100.00%
Bootstrap support for F6PWM6 as seed ortholog is 100%.
Bootstrap support for F1SAQ4 as seed ortholog is 100%.

Group of orthologs #2393. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 S.scrofa:314

F6XYB7              	100.00%		F1RS85              	100.00%
Bootstrap support for F6XYB7 as seed ortholog is 100%.
Bootstrap support for F1RS85 as seed ortholog is 100%.

Group of orthologs #2394. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 S.scrofa:203

F6XWH9              	100.00%		F1S9W2              	100.00%
Bootstrap support for F6XWH9 as seed ortholog is 100%.
Bootstrap support for F1S9W2 as seed ortholog is 100%.

Group of orthologs #2395. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:223

H2XUL2              	100.00%		F1RKX9              	100.00%
Bootstrap support for H2XUL2 as seed ortholog is 99%.
Bootstrap support for F1RKX9 as seed ortholog is 100%.

Group of orthologs #2396. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 S.scrofa:314

F6XVD3              	100.00%		F1SHV6              	100.00%
Bootstrap support for F6XVD3 as seed ortholog is 100%.
Bootstrap support for F1SHV6 as seed ortholog is 100%.

Group of orthologs #2397. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 S.scrofa:314

F6XNG1              	100.00%		F1SQ07              	100.00%
Bootstrap support for F6XNG1 as seed ortholog is 100%.
Bootstrap support for F1SQ07 as seed ortholog is 100%.

Group of orthologs #2398. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 S.scrofa:314

H2Y3F6              	100.00%		I3LAI7              	100.00%
Bootstrap support for H2Y3F6 as seed ortholog is 100%.
Bootstrap support for I3LAI7 as seed ortholog is 100%.

Group of orthologs #2399. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 S.scrofa:314

H2XQ81              	100.00%		I3LSU3              	100.00%
Bootstrap support for H2XQ81 as seed ortholog is 100%.
Bootstrap support for I3LSU3 as seed ortholog is 100%.

Group of orthologs #2400. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 S.scrofa:313

H2XRX5              	100.00%		F1RMN9              	100.00%
                    	       		F1RSB0              	20.98%
Bootstrap support for H2XRX5 as seed ortholog is 100%.
Bootstrap support for F1RMN9 as seed ortholog is 100%.

Group of orthologs #2401. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 S.scrofa:102

F6XSD8              	100.00%		F1SNB9              	100.00%
H2XPB7              	22.12%		
Bootstrap support for F6XSD8 as seed ortholog is 100%.
Bootstrap support for F1SNB9 as seed ortholog is 99%.

Group of orthologs #2402. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 S.scrofa:313

H2XXL5              	100.00%		I3LDH6              	100.00%
                    	       		I3LN70              	100.00%
Bootstrap support for H2XXL5 as seed ortholog is 100%.
Bootstrap support for I3LDH6 as seed ortholog is 100%.
Bootstrap support for I3LN70 as seed ortholog is 100%.

Group of orthologs #2403. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 S.scrofa:313

F6PM75              	100.00%		F1RT06              	100.00%
Bootstrap support for F6PM75 as seed ortholog is 100%.
Bootstrap support for F1RT06 as seed ortholog is 100%.

Group of orthologs #2404. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 S.scrofa:258

F6ZVR2              	100.00%		F1RTW8              	100.00%
Bootstrap support for F6ZVR2 as seed ortholog is 100%.
Bootstrap support for F1RTW8 as seed ortholog is 100%.

Group of orthologs #2405. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 S.scrofa:313

H2XM20              	100.00%		F1RRJ3              	100.00%
Bootstrap support for H2XM20 as seed ortholog is 100%.
Bootstrap support for F1RRJ3 as seed ortholog is 100%.

Group of orthologs #2406. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:158

H2XRD4              	100.00%		F1RQS8              	100.00%
Bootstrap support for H2XRD4 as seed ortholog is 100%.
Bootstrap support for F1RQS8 as seed ortholog is 100%.

Group of orthologs #2407. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 S.scrofa:89

F6WQV1              	100.00%		F1SN70              	100.00%
Bootstrap support for F6WQV1 as seed ortholog is 99%.
Bootstrap support for F1SN70 as seed ortholog is 98%.

Group of orthologs #2408. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 S.scrofa:313

F6Z5W5              	100.00%		I3LE74              	100.00%
Bootstrap support for F6Z5W5 as seed ortholog is 100%.
Bootstrap support for I3LE74 as seed ortholog is 100%.

Group of orthologs #2409. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:19

F6X9C7              	100.00%		Q06AA0              	100.00%
H2XY34              	7.66%		Q06A99              	31.32%
Bootstrap support for F6X9C7 as seed ortholog is 93%.
Bootstrap support for Q06AA0 as seed ortholog is 66%.
Alternative seed ortholog is F1S4B2 (19 bits away from this cluster)

Group of orthologs #2410. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 S.scrofa:157

F6Y9R7              	100.00%		F1RR66              	100.00%
Bootstrap support for F6Y9R7 as seed ortholog is 100%.
Bootstrap support for F1RR66 as seed ortholog is 99%.

Group of orthologs #2411. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 S.scrofa:312

F6ZIP8              	100.00%		F1RV70              	100.00%
Bootstrap support for F6ZIP8 as seed ortholog is 100%.
Bootstrap support for F1RV70 as seed ortholog is 100%.

Group of orthologs #2412. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 S.scrofa:312

F6Y3X0              	100.00%		I3LD85              	100.00%
Bootstrap support for F6Y3X0 as seed ortholog is 100%.
Bootstrap support for I3LD85 as seed ortholog is 100%.

Group of orthologs #2413. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 S.scrofa:312

H2XK69              	100.00%		I3LU26              	100.00%
Bootstrap support for H2XK69 as seed ortholog is 100%.
Bootstrap support for I3LU26 as seed ortholog is 100%.

Group of orthologs #2414. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 S.scrofa:25

H2XWE4              	100.00%		I3LJ87              	100.00%
Bootstrap support for H2XWE4 as seed ortholog is 100%.
Bootstrap support for I3LJ87 as seed ortholog is 95%.

Group of orthologs #2415. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.scrofa:105

F7B4M8              	100.00%		P09954              	100.00%
F7BE27              	100.00%		F1SMS2              	100.00%
F6Y8L3              	20.00%		I3LHC6              	88.83%
                    	       		I3LFU5              	26.56%
                    	       		F1SMS1              	25.82%
                    	       		I3L559              	19.05%
                    	       		F1SNE0              	14.47%
Bootstrap support for F7B4M8 as seed ortholog is 92%.
Bootstrap support for F7BE27 as seed ortholog is 81%.
Bootstrap support for P09954 as seed ortholog is 99%.
Bootstrap support for F1SMS2 as seed ortholog is 99%.

Group of orthologs #2416. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.scrofa:311

F6W9T5              	100.00%		I3LRS8              	100.00%
                    	       		I3LGJ4              	57.20%
                    	       		I3L5J0              	25.68%
Bootstrap support for F6W9T5 as seed ortholog is 99%.
Bootstrap support for I3LRS8 as seed ortholog is 100%.

Group of orthologs #2417. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 S.scrofa:311

F6XAQ8              	100.00%		F1SPX9              	100.00%
                    	       		F1RP11              	6.27%
Bootstrap support for F6XAQ8 as seed ortholog is 100%.
Bootstrap support for F1SPX9 as seed ortholog is 100%.

Group of orthologs #2418. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:203

F6PIE8              	100.00%		F1S1D3              	100.00%
Bootstrap support for F6PIE8 as seed ortholog is 100%.
Bootstrap support for F1S1D3 as seed ortholog is 100%.

Group of orthologs #2419. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 S.scrofa:311

F6S1K1              	100.00%		F1SG16              	100.00%
Bootstrap support for F6S1K1 as seed ortholog is 100%.
Bootstrap support for F1SG16 as seed ortholog is 100%.

Group of orthologs #2420. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 S.scrofa:125

H2Y040              	100.00%		C4MXZ1              	100.00%
Bootstrap support for H2Y040 as seed ortholog is 76%.
Bootstrap support for C4MXZ1 as seed ortholog is 100%.

Group of orthologs #2421. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 S.scrofa:311

F6RAN6              	100.00%		I3LPQ4              	100.00%
Bootstrap support for F6RAN6 as seed ortholog is 100%.
Bootstrap support for I3LPQ4 as seed ortholog is 100%.

Group of orthologs #2422. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 S.scrofa:311

Q95YJ5              	100.00%		F1SAE4              	100.00%
Bootstrap support for Q95YJ5 as seed ortholog is 100%.
Bootstrap support for F1SAE4 as seed ortholog is 100%.

Group of orthologs #2423. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 S.scrofa:311

F7AAE8              	100.00%		I3LLA0              	100.00%
Bootstrap support for F7AAE8 as seed ortholog is 100%.
Bootstrap support for I3LLA0 as seed ortholog is 100%.

Group of orthologs #2424. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 S.scrofa:311

F7B2Q1              	100.00%		I3LPE5              	100.00%
Bootstrap support for F7B2Q1 as seed ortholog is 100%.
Bootstrap support for I3LPE5 as seed ortholog is 100%.

Group of orthologs #2425. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 S.scrofa:243

F6VIB4              	100.00%		F1SDW9              	100.00%
                    	       		F1RSP4              	20.33%
Bootstrap support for F6VIB4 as seed ortholog is 100%.
Bootstrap support for F1SDW9 as seed ortholog is 100%.

Group of orthologs #2426. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 S.scrofa:310

F6V5K2              	100.00%		F1S5L7              	100.00%
Bootstrap support for F6V5K2 as seed ortholog is 100%.
Bootstrap support for F1S5L7 as seed ortholog is 100%.

Group of orthologs #2427. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.scrofa:310

F6RGF8              	100.00%		I3L8M3              	100.00%
Bootstrap support for F6RGF8 as seed ortholog is 100%.
Bootstrap support for I3L8M3 as seed ortholog is 100%.

Group of orthologs #2428. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 S.scrofa:310

H2XXM9              	100.00%		F1RJ03              	100.00%
Bootstrap support for H2XXM9 as seed ortholog is 100%.
Bootstrap support for F1RJ03 as seed ortholog is 100%.

Group of orthologs #2429. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 S.scrofa:310

H2XPJ2              	100.00%		F1RZQ4              	100.00%
Bootstrap support for H2XPJ2 as seed ortholog is 100%.
Bootstrap support for F1RZQ4 as seed ortholog is 100%.

Group of orthologs #2430. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 S.scrofa:310

F6ZGT8              	100.00%		I3L6X7              	100.00%
Bootstrap support for F6ZGT8 as seed ortholog is 100%.
Bootstrap support for I3L6X7 as seed ortholog is 100%.

Group of orthologs #2431. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 S.scrofa:309

F6VFD2              	100.00%		F2Z5M5              	100.00%
                    	       		F1RIN6              	37.66%
                    	       		F1RYM8              	11.69%
Bootstrap support for F6VFD2 as seed ortholog is 100%.
Bootstrap support for F2Z5M5 as seed ortholog is 100%.

Group of orthologs #2432. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.scrofa:253

H2XMQ4              	100.00%		I3LM03              	100.00%
                    	       		Q28960              	74.80%
                    	       		F1SGX4              	39.37%
Bootstrap support for H2XMQ4 as seed ortholog is 100%.
Bootstrap support for I3LM03 as seed ortholog is 100%.

Group of orthologs #2433. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 S.scrofa:151

H2XLP9              	100.00%		F1S5B4              	100.00%
                    	       		F1SGM5              	23.05%
Bootstrap support for H2XLP9 as seed ortholog is 100%.
Bootstrap support for F1S5B4 as seed ortholog is 99%.

Group of orthologs #2434. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 S.scrofa:197

F6PHF4              	100.00%		F1SSZ8              	100.00%
Bootstrap support for F6PHF4 as seed ortholog is 99%.
Bootstrap support for F1SSZ8 as seed ortholog is 99%.

Group of orthologs #2435. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 S.scrofa:309

F6ZQG8              	100.00%		F1S0S6              	100.00%
Bootstrap support for F6ZQG8 as seed ortholog is 100%.
Bootstrap support for F1S0S6 as seed ortholog is 100%.

Group of orthologs #2436. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.scrofa:125

F7AN60              	100.00%		F1RZ75              	100.00%
Bootstrap support for F7AN60 as seed ortholog is 99%.
Bootstrap support for F1RZ75 as seed ortholog is 99%.

Group of orthologs #2437. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 S.scrofa:309

H2XXM2              	100.00%		F1RG59              	100.00%
Bootstrap support for H2XXM2 as seed ortholog is 100%.
Bootstrap support for F1RG59 as seed ortholog is 100%.

Group of orthologs #2438. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 S.scrofa:309

F6W074              	100.00%		I3L7N5              	100.00%
Bootstrap support for F6W074 as seed ortholog is 100%.
Bootstrap support for I3L7N5 as seed ortholog is 100%.

Group of orthologs #2439. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 S.scrofa:309

Q1RL46              	100.00%		F1RLC3              	100.00%
Bootstrap support for Q1RL46 as seed ortholog is 100%.
Bootstrap support for F1RLC3 as seed ortholog is 100%.

Group of orthologs #2440. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 S.scrofa:309

F6XRP8              	100.00%		I3LVB7              	100.00%
Bootstrap support for F6XRP8 as seed ortholog is 100%.
Bootstrap support for I3LVB7 as seed ortholog is 100%.

Group of orthologs #2441. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 S.scrofa:309

I6L212              	100.00%		F1SNK3              	100.00%
Bootstrap support for I6L212 as seed ortholog is 100%.
Bootstrap support for F1SNK3 as seed ortholog is 100%.

Group of orthologs #2442. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 S.scrofa:309

H2XU19              	100.00%		I3LAY1              	100.00%
Bootstrap support for H2XU19 as seed ortholog is 100%.
Bootstrap support for I3LAY1 as seed ortholog is 100%.

Group of orthologs #2443. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 S.scrofa:81

H2XVQ9              	100.00%		I3LEX0              	100.00%
Bootstrap support for H2XVQ9 as seed ortholog is 100%.
Bootstrap support for I3LEX0 as seed ortholog is 99%.

Group of orthologs #2444. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 S.scrofa:122

F7AMZ2              	100.00%		P00591              	100.00%
                    	       		B8XY18              	57.61%
                    	       		F1S4T6              	48.35%
Bootstrap support for F7AMZ2 as seed ortholog is 78%.
Bootstrap support for P00591 as seed ortholog is 99%.

Group of orthologs #2445. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 S.scrofa:308

F6Q3L6              	100.00%		A9YUB1              	100.00%
Bootstrap support for F6Q3L6 as seed ortholog is 100%.
Bootstrap support for A9YUB1 as seed ortholog is 100%.

Group of orthologs #2446. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 S.scrofa:308

F6RCH7              	100.00%		F1RG35              	100.00%
Bootstrap support for F6RCH7 as seed ortholog is 100%.
Bootstrap support for F1RG35 as seed ortholog is 100%.

Group of orthologs #2447. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 S.scrofa:308

F6Z8N3              	100.00%		F1RM03              	100.00%
Bootstrap support for F6Z8N3 as seed ortholog is 100%.
Bootstrap support for F1RM03 as seed ortholog is 100%.

Group of orthologs #2448. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 S.scrofa:102

F6SS61              	100.00%		F1SRD8              	100.00%
Bootstrap support for F6SS61 as seed ortholog is 100%.
Bootstrap support for F1SRD8 as seed ortholog is 100%.

Group of orthologs #2449. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 S.scrofa:102

F6WKA4              	100.00%		F1SPM9              	100.00%
Bootstrap support for F6WKA4 as seed ortholog is 99%.
Bootstrap support for F1SPM9 as seed ortholog is 99%.

Group of orthologs #2450. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 S.scrofa:79

F6X4T0              	100.00%		I3L5B2              	100.00%
Bootstrap support for F6X4T0 as seed ortholog is 100%.
Bootstrap support for I3L5B2 as seed ortholog is 99%.

Group of orthologs #2451. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 S.scrofa:308

H2XJN9              	100.00%		F1SGR8              	100.00%
Bootstrap support for H2XJN9 as seed ortholog is 100%.
Bootstrap support for F1SGR8 as seed ortholog is 100%.

Group of orthologs #2452. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 S.scrofa:308

H2XR12              	100.00%		I3LTL1              	100.00%
Bootstrap support for H2XR12 as seed ortholog is 100%.
Bootstrap support for I3LTL1 as seed ortholog is 100%.

Group of orthologs #2453. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.scrofa:307

F6S925              	100.00%		F1SS96              	100.00%
F6S909              	14.49%		F1SR96              	26.32%
Q4H398              	7.36%		D0G774              	15.58%
Bootstrap support for F6S925 as seed ortholog is 94%.
Bootstrap support for F1SS96 as seed ortholog is 100%.

Group of orthologs #2454. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.scrofa:59

H2Y050              	100.00%		F1SEH4              	100.00%
                    	       		F1S7Y0              	24.19%
                    	       		I3L7K4              	21.35%
                    	       		F1RZL2              	7.70%
Bootstrap support for H2Y050 as seed ortholog is 100%.
Bootstrap support for F1SEH4 as seed ortholog is 96%.

Group of orthologs #2455. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.scrofa:307

F6TN28              	100.00%		F1RZZ3              	100.00%
                    	       		F1S006              	29.48%
Bootstrap support for F6TN28 as seed ortholog is 100%.
Bootstrap support for F1RZZ3 as seed ortholog is 100%.

Group of orthologs #2456. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.scrofa:307

F6SUC9              	100.00%		F1SBB3              	100.00%
                    	       		F1RZM4              	9.55%
Bootstrap support for F6SUC9 as seed ortholog is 100%.
Bootstrap support for F1SBB3 as seed ortholog is 100%.

Group of orthologs #2457. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.scrofa:26

H2XUU8              	100.00%		F1RQU4              	100.00%
                    	       		F1RU56              	14.11%
Bootstrap support for H2XUU8 as seed ortholog is 100%.
Bootstrap support for F1RQU4 as seed ortholog is 75%.

Group of orthologs #2458. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.scrofa:79

F6YVH4              	100.00%		F1SIE9              	100.00%
                    	       		F1SJ26              	67.29%
Bootstrap support for F6YVH4 as seed ortholog is 94%.
Bootstrap support for F1SIE9 as seed ortholog is 95%.

Group of orthologs #2459. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 S.scrofa:307

F6Z498              	100.00%		F1SIY1              	100.00%
                    	       		I3LEN6              	11.67%
Bootstrap support for F6Z498 as seed ortholog is 99%.
Bootstrap support for F1SIY1 as seed ortholog is 100%.

Group of orthologs #2460. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.scrofa:307

F7A5R9              	100.00%		I3LK75              	100.00%
                    	       		I3LTJ9              	81.47%
Bootstrap support for F7A5R9 as seed ortholog is 100%.
Bootstrap support for I3LK75 as seed ortholog is 100%.

Group of orthologs #2461. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.scrofa:307

F6Q5U4              	100.00%		F1RLE8              	100.00%
Bootstrap support for F6Q5U4 as seed ortholog is 100%.
Bootstrap support for F1RLE8 as seed ortholog is 100%.

Group of orthologs #2462. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.scrofa:307

F6R1D0              	100.00%		F1SH16              	100.00%
Bootstrap support for F6R1D0 as seed ortholog is 100%.
Bootstrap support for F1SH16 as seed ortholog is 100%.

Group of orthologs #2463. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.scrofa:307

F6XFA8              	100.00%		F1RXI5              	100.00%
Bootstrap support for F6XFA8 as seed ortholog is 100%.
Bootstrap support for F1RXI5 as seed ortholog is 100%.

Group of orthologs #2464. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.scrofa:307

F6PN13              	100.00%		F1SMT1              	100.00%
Bootstrap support for F6PN13 as seed ortholog is 100%.
Bootstrap support for F1SMT1 as seed ortholog is 100%.

Group of orthologs #2465. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.scrofa:233

H2XNY0              	100.00%		A5GFT1              	100.00%
Bootstrap support for H2XNY0 as seed ortholog is 100%.
Bootstrap support for A5GFT1 as seed ortholog is 100%.

Group of orthologs #2466. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:171

F6YU98              	100.00%		F1RZV2              	100.00%
Bootstrap support for F6YU98 as seed ortholog is 100%.
Bootstrap support for F1RZV2 as seed ortholog is 100%.

Group of orthologs #2467. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 S.scrofa:228

F7AA36              	100.00%		F1SDM4              	100.00%
Bootstrap support for F7AA36 as seed ortholog is 100%.
Bootstrap support for F1SDM4 as seed ortholog is 100%.

Group of orthologs #2468. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.scrofa:307

F6YTA1              	100.00%		I3LC31              	100.00%
Bootstrap support for F6YTA1 as seed ortholog is 100%.
Bootstrap support for I3LC31 as seed ortholog is 100%.

Group of orthologs #2469. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.scrofa:307

F7AFK8              	100.00%		I3L819              	100.00%
Bootstrap support for F7AFK8 as seed ortholog is 100%.
Bootstrap support for I3L819 as seed ortholog is 100%.

Group of orthologs #2470. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.scrofa:242

F7ASN6              	100.00%		I3LGP6              	100.00%
Bootstrap support for F7ASN6 as seed ortholog is 100%.
Bootstrap support for I3LGP6 as seed ortholog is 100%.

Group of orthologs #2471. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 S.scrofa:307

H2XYE0              	100.00%		Q9GKX6              	100.00%
Bootstrap support for H2XYE0 as seed ortholog is 100%.
Bootstrap support for Q9GKX6 as seed ortholog is 100%.

Group of orthologs #2472. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.scrofa:148

H2Y1B6              	100.00%		Q007T5              	100.00%
Bootstrap support for H2Y1B6 as seed ortholog is 99%.
Bootstrap support for Q007T5 as seed ortholog is 100%.

Group of orthologs #2473. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 S.scrofa:306

H2XYT3              	100.00%		I3L6K0              	100.00%
Bootstrap support for H2XYT3 as seed ortholog is 100%.
Bootstrap support for I3L6K0 as seed ortholog is 100%.

Group of orthologs #2474. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:94

H2XMX1              	100.00%		I3LPC5              	100.00%
                    	       		F1S3A4              	61.30%
                    	       		F1SEQ6              	13.79%
Bootstrap support for H2XMX1 as seed ortholog is 100%.
Bootstrap support for I3LPC5 as seed ortholog is 99%.

Group of orthologs #2475. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 S.scrofa:62

F6SUL1              	100.00%		I3LQF1              	100.00%
                    	       		F1RSR2              	19.28%
Bootstrap support for F6SUL1 as seed ortholog is 99%.
Bootstrap support for I3LQF1 as seed ortholog is 95%.

Group of orthologs #2476. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 S.scrofa:118

F6V6X8              	100.00%		K7GQ57              	100.00%
                    	       		F1RS88              	25.23%
Bootstrap support for F6V6X8 as seed ortholog is 100%.
Bootstrap support for K7GQ57 as seed ortholog is 99%.

Group of orthologs #2477. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:125

F6TYN3              	100.00%		Q56P20              	100.00%
                    	       		B9V4F0              	67.24%
Bootstrap support for F6TYN3 as seed ortholog is 92%.
Bootstrap support for Q56P20 as seed ortholog is 100%.

Group of orthologs #2478. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.scrofa:68

F6USY0              	100.00%		F1SCX6              	100.00%
Bootstrap support for F6USY0 as seed ortholog is 99%.
Bootstrap support for F1SCX6 as seed ortholog is 94%.

Group of orthologs #2479. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 S.scrofa:161

F6TS32              	100.00%		F1SH27              	100.00%
Bootstrap support for F6TS32 as seed ortholog is 100%.
Bootstrap support for F1SH27 as seed ortholog is 100%.

Group of orthologs #2480. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 S.scrofa:305

F6YB67              	100.00%		F1S7N8              	100.00%
Bootstrap support for F6YB67 as seed ortholog is 100%.
Bootstrap support for F1S7N8 as seed ortholog is 100%.

Group of orthologs #2481. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 S.scrofa:305

H2XVN4              	100.00%		F1RFL7              	100.00%
Bootstrap support for H2XVN4 as seed ortholog is 100%.
Bootstrap support for F1RFL7 as seed ortholog is 100%.

Group of orthologs #2482. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:124

F6ZFM9              	100.00%		F1SDJ0              	100.00%
Bootstrap support for F6ZFM9 as seed ortholog is 99%.
Bootstrap support for F1SDJ0 as seed ortholog is 99%.

Group of orthologs #2483. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 S.scrofa:305

F6ZK09              	100.00%		F1SD53              	100.00%
Bootstrap support for F6ZK09 as seed ortholog is 100%.
Bootstrap support for F1SD53 as seed ortholog is 100%.

Group of orthologs #2484. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 S.scrofa:8

F6PV66              	100.00%		I3LI25              	100.00%
Bootstrap support for F6PV66 as seed ortholog is 100%.
Bootstrap support for I3LI25 as seed ortholog is 53%.
Alternative seed ortholog is F1RMV6 (8 bits away from this cluster)

Group of orthologs #2485. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 S.scrofa:305

F6XCY9              	100.00%		I3LRQ8              	100.00%
Bootstrap support for F6XCY9 as seed ortholog is 100%.
Bootstrap support for I3LRQ8 as seed ortholog is 100%.

Group of orthologs #2486. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 S.scrofa:305

F7BMH5              	100.00%		I3LQY9              	100.00%
Bootstrap support for F7BMH5 as seed ortholog is 100%.
Bootstrap support for I3LQY9 as seed ortholog is 100%.

Group of orthologs #2487. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 S.scrofa:54

H2XSV6              	100.00%		Q6RHW4              	100.00%
                    	       		F1SMK4              	7.32%
                    	       		F1SPN8              	5.20%
                    	       		F1SMK3              	5.20%
Bootstrap support for H2XSV6 as seed ortholog is 100%.
Bootstrap support for Q6RHW4 as seed ortholog is 91%.

Group of orthologs #2488. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 S.scrofa:304

F6QM57              	100.00%		I3L9F5              	100.00%
                    	       		F1RL93              	15.52%
Bootstrap support for F6QM57 as seed ortholog is 100%.
Bootstrap support for I3L9F5 as seed ortholog is 100%.

Group of orthologs #2489. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 S.scrofa:304

F6WPS3              	100.00%		F1RKJ4              	100.00%
Bootstrap support for F6WPS3 as seed ortholog is 100%.
Bootstrap support for F1RKJ4 as seed ortholog is 100%.

Group of orthologs #2490. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 S.scrofa:304

F6Y6K2              	100.00%		F1RKB1              	100.00%
Bootstrap support for F6Y6K2 as seed ortholog is 100%.
Bootstrap support for F1RKB1 as seed ortholog is 100%.

Group of orthologs #2491. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:39

F6Z916              	100.00%		F1RRX8              	100.00%
Bootstrap support for F6Z916 as seed ortholog is 98%.
Bootstrap support for F1RRX8 as seed ortholog is 81%.

Group of orthologs #2492. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.scrofa:176

F6Q1G7              	100.00%		F2Z5H2              	100.00%
Bootstrap support for F6Q1G7 as seed ortholog is 100%.
Bootstrap support for F2Z5H2 as seed ortholog is 100%.

Group of orthologs #2493. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 S.scrofa:264

H2XLQ6              	100.00%		F1S5T5              	100.00%
Bootstrap support for H2XLQ6 as seed ortholog is 100%.
Bootstrap support for F1S5T5 as seed ortholog is 100%.

Group of orthologs #2494. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 S.scrofa:304

F6ZU45              	100.00%		F1SSE3              	100.00%
Bootstrap support for F6ZU45 as seed ortholog is 100%.
Bootstrap support for F1SSE3 as seed ortholog is 100%.

Group of orthologs #2495. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 S.scrofa:304

H2XUN3              	100.00%		F1S6K4              	100.00%
Bootstrap support for H2XUN3 as seed ortholog is 100%.
Bootstrap support for F1S6K4 as seed ortholog is 100%.

Group of orthologs #2496. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.scrofa:304

Q8T888              	100.00%		F1S3J1              	100.00%
Bootstrap support for Q8T888 as seed ortholog is 100%.
Bootstrap support for F1S3J1 as seed ortholog is 100%.

Group of orthologs #2497. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 S.scrofa:243

H2XZK6              	100.00%		F1SI59              	100.00%
Bootstrap support for H2XZK6 as seed ortholog is 100%.
Bootstrap support for F1SI59 as seed ortholog is 100%.

Group of orthologs #2498. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 S.scrofa:304

Q8HIM8              	100.00%		Q9TDR1              	100.00%
Bootstrap support for Q8HIM8 as seed ortholog is 100%.
Bootstrap support for Q9TDR1 as seed ortholog is 100%.

Group of orthologs #2499. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 S.scrofa:303

F6XKZ6              	100.00%		F1S9A3              	100.00%
                    	       		Q5EE05              	22.20%
Bootstrap support for F6XKZ6 as seed ortholog is 100%.
Bootstrap support for F1S9A3 as seed ortholog is 100%.

Group of orthologs #2500. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 S.scrofa:198

F6PZV6              	100.00%		F1RHJ0              	100.00%
Bootstrap support for F6PZV6 as seed ortholog is 100%.
Bootstrap support for F1RHJ0 as seed ortholog is 99%.

Group of orthologs #2501. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.scrofa:224

F6QC45              	100.00%		F2Z501              	100.00%
Bootstrap support for F6QC45 as seed ortholog is 100%.
Bootstrap support for F2Z501 as seed ortholog is 100%.

Group of orthologs #2502. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 S.scrofa:303

F6VI88              	100.00%		I3LHY5              	100.00%
Bootstrap support for F6VI88 as seed ortholog is 100%.
Bootstrap support for I3LHY5 as seed ortholog is 100%.

Group of orthologs #2503. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 S.scrofa:242

H2XTW5              	100.00%		F2Z5W5              	100.00%
Bootstrap support for H2XTW5 as seed ortholog is 100%.
Bootstrap support for F2Z5W5 as seed ortholog is 100%.

Group of orthologs #2504. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 S.scrofa:168

F6YZB7              	100.00%		F1SA11              	100.00%
F6Q7A1              	56.31%		I3L7X2              	19.28%
F7BIZ0              	24.49%		
F6VZ78              	21.72%		
Bootstrap support for F6YZB7 as seed ortholog is 100%.
Bootstrap support for F1SA11 as seed ortholog is 100%.

Group of orthologs #2505. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 S.scrofa:55

F6SBY9              	100.00%		F1RNL3              	100.00%
Q2PEE5              	10.28%		
Bootstrap support for F6SBY9 as seed ortholog is 100%.
Bootstrap support for F1RNL3 as seed ortholog is 90%.

Group of orthologs #2506. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 S.scrofa:302

F6QR18              	100.00%		I3L9Q5              	100.00%
                    	       		F1SUP7              	34.64%
Bootstrap support for F6QR18 as seed ortholog is 100%.
Bootstrap support for I3L9Q5 as seed ortholog is 100%.

Group of orthologs #2507. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 S.scrofa:302

F6RHG2              	100.00%		F1RNN0              	100.00%
Bootstrap support for F6RHG2 as seed ortholog is 100%.
Bootstrap support for F1RNN0 as seed ortholog is 100%.

Group of orthologs #2508. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 S.scrofa:302

F6RYL0              	100.00%		F1S9S8              	100.00%
Bootstrap support for F6RYL0 as seed ortholog is 100%.
Bootstrap support for F1S9S8 as seed ortholog is 100%.

Group of orthologs #2509. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 S.scrofa:302

F6WW79              	100.00%		I3L773              	100.00%
Bootstrap support for F6WW79 as seed ortholog is 100%.
Bootstrap support for I3L773 as seed ortholog is 100%.

Group of orthologs #2510. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 S.scrofa:302

H2XS91              	100.00%		F1SJS0              	100.00%
Bootstrap support for H2XS91 as seed ortholog is 100%.
Bootstrap support for F1SJS0 as seed ortholog is 100%.

Group of orthologs #2511. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 S.scrofa:144

F7AG96              	100.00%		I3LC07              	100.00%
Bootstrap support for F7AG96 as seed ortholog is 100%.
Bootstrap support for I3LC07 as seed ortholog is 100%.

Group of orthologs #2512. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.scrofa:97

H2Y3H5              	100.00%		I3L5L1              	100.00%
Bootstrap support for H2Y3H5 as seed ortholog is 100%.
Bootstrap support for I3L5L1 as seed ortholog is 100%.

Group of orthologs #2513. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.scrofa:83

Q5SE06              	100.00%		I3LVJ0              	100.00%
F6VL03              	100.00%		F1RQL1              	100.00%
Bootstrap support for Q5SE06 as seed ortholog is 97%.
Bootstrap support for F6VL03 as seed ortholog is 98%.
Bootstrap support for I3LVJ0 as seed ortholog is 98%.
Bootstrap support for F1RQL1 as seed ortholog is 98%.

Group of orthologs #2514. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 S.scrofa:301

F6X5U2              	100.00%		F1SA26              	100.00%
                    	       		Q95JC8              	25.18%
Bootstrap support for F6X5U2 as seed ortholog is 100%.
Bootstrap support for F1SA26 as seed ortholog is 100%.

Group of orthologs #2515. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 S.scrofa:301

Q68A32              	100.00%		F1RU11              	100.00%
                    	       		F1S7E4              	7.35%
Bootstrap support for Q68A32 as seed ortholog is 100%.
Bootstrap support for F1RU11 as seed ortholog is 100%.

Group of orthologs #2516. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 S.scrofa:301

F6SQC0              	100.00%		F1RXT9              	100.00%
Bootstrap support for F6SQC0 as seed ortholog is 100%.
Bootstrap support for F1RXT9 as seed ortholog is 100%.

Group of orthologs #2517. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 S.scrofa:301

F6PH90              	100.00%		F1SQM1              	100.00%
Bootstrap support for F6PH90 as seed ortholog is 100%.
Bootstrap support for F1SQM1 as seed ortholog is 100%.

Group of orthologs #2518. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 S.scrofa:301

F7B1W3              	100.00%		F1SDX8              	100.00%
Bootstrap support for F7B1W3 as seed ortholog is 100%.
Bootstrap support for F1SDX8 as seed ortholog is 100%.

Group of orthologs #2519. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 S.scrofa:76

F6XBT4              	100.00%		F2Z546              	100.00%
Bootstrap support for F6XBT4 as seed ortholog is 100%.
Bootstrap support for F2Z546 as seed ortholog is 99%.

Group of orthologs #2520. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 S.scrofa:301

F6QAA1              	100.00%		I3LRW3              	100.00%
Bootstrap support for F6QAA1 as seed ortholog is 100%.
Bootstrap support for I3LRW3 as seed ortholog is 100%.

Group of orthologs #2521. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.scrofa:31

F6TR93              	100.00%		Q9XT90              	100.00%
                    	       		I3LEE9              	71.41%
                    	       		F1RFS7              	41.73%
                    	       		I3LFQ7              	6.68%
Bootstrap support for F6TR93 as seed ortholog is 99%.
Bootstrap support for Q9XT90 as seed ortholog is 77%.

Group of orthologs #2522. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 S.scrofa:53

Q4H2X6              	100.00%		A9XAM2              	100.00%
                    	       		F1SM76              	41.81%
                    	       		O62807              	35.79%
Bootstrap support for Q4H2X6 as seed ortholog is 100%.
Bootstrap support for A9XAM2 as seed ortholog is 91%.

Group of orthologs #2523. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:132

H2Y0T2              	100.00%		O97649              	100.00%
                    	       		O97562              	50.16%
Bootstrap support for H2Y0T2 as seed ortholog is 99%.
Bootstrap support for O97649 as seed ortholog is 99%.

Group of orthologs #2524. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 S.scrofa:50

F7A955              	100.00%		F1RFV5              	100.00%
Bootstrap support for F7A955 as seed ortholog is 100%.
Bootstrap support for F1RFV5 as seed ortholog is 98%.

Group of orthologs #2525. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:100

F6Z3D0              	100.00%		F1RU48              	100.00%
Bootstrap support for F6Z3D0 as seed ortholog is 99%.
Bootstrap support for F1RU48 as seed ortholog is 99%.

Group of orthologs #2526. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 S.scrofa:300

F7A5H4              	100.00%		F1RQN8              	100.00%
Bootstrap support for F7A5H4 as seed ortholog is 100%.
Bootstrap support for F1RQN8 as seed ortholog is 100%.

Group of orthologs #2527. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.scrofa:300

H2XW94              	100.00%		A8CYZ2              	100.00%
Bootstrap support for H2XW94 as seed ortholog is 100%.
Bootstrap support for A8CYZ2 as seed ortholog is 100%.

Group of orthologs #2528. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 S.scrofa:300

F6ZQ58              	100.00%		F1SRD6              	100.00%
Bootstrap support for F6ZQ58 as seed ortholog is 100%.
Bootstrap support for F1SRD6 as seed ortholog is 100%.

Group of orthologs #2529. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:213

F6VCR2              	100.00%		I3LHC8              	100.00%
Bootstrap support for F6VCR2 as seed ortholog is 100%.
Bootstrap support for I3LHC8 as seed ortholog is 100%.

Group of orthologs #2530. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 S.scrofa:193

H2XME3              	100.00%		I3LLA5              	100.00%
Bootstrap support for H2XME3 as seed ortholog is 100%.
Bootstrap support for I3LLA5 as seed ortholog is 100%.

Group of orthologs #2531. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 S.scrofa:299

F6ZM98              	100.00%		F1RRY9              	100.00%
                    	       		F1S577              	10.36%
Bootstrap support for F6ZM98 as seed ortholog is 100%.
Bootstrap support for F1RRY9 as seed ortholog is 100%.

Group of orthologs #2532. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 S.scrofa:299

H2XY10              	100.00%		F1RUJ0              	100.00%
                    	       		I3LJT3              	55.73%
Bootstrap support for H2XY10 as seed ortholog is 100%.
Bootstrap support for F1RUJ0 as seed ortholog is 100%.

Group of orthologs #2533. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 S.scrofa:299

F6XPD3              	100.00%		I3LKS9              	100.00%
                    	       		F1SMQ6              	31.13%
Bootstrap support for F6XPD3 as seed ortholog is 100%.
Bootstrap support for I3LKS9 as seed ortholog is 100%.

Group of orthologs #2534. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 S.scrofa:299

F6RD45              	100.00%		F1RX42              	100.00%
Bootstrap support for F6RD45 as seed ortholog is 100%.
Bootstrap support for F1RX42 as seed ortholog is 100%.

Group of orthologs #2535. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.scrofa:136

F6RJT7              	100.00%		F1SQL4              	100.00%
Bootstrap support for F6RJT7 as seed ortholog is 100%.
Bootstrap support for F1SQL4 as seed ortholog is 99%.

Group of orthologs #2536. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 S.scrofa:299

H2XQR1              	100.00%		F1RLI9              	100.00%
Bootstrap support for H2XQR1 as seed ortholog is 100%.
Bootstrap support for F1RLI9 as seed ortholog is 100%.

Group of orthologs #2537. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 S.scrofa:299

H2XUT3              	100.00%		F1RHK8              	100.00%
Bootstrap support for H2XUT3 as seed ortholog is 100%.
Bootstrap support for F1RHK8 as seed ortholog is 100%.

Group of orthologs #2538. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.scrofa:299

F6ZNK2              	100.00%		F1SPR3              	100.00%
Bootstrap support for F6ZNK2 as seed ortholog is 96%.
Bootstrap support for F1SPR3 as seed ortholog is 100%.

Group of orthologs #2539. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 S.scrofa:46

H2XU41              	100.00%		F1S418              	100.00%
Bootstrap support for H2XU41 as seed ortholog is 88%.
Bootstrap support for F1S418 as seed ortholog is 97%.

Group of orthologs #2540. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 S.scrofa:299

F6U602              	100.00%		I3LLC8              	100.00%
Bootstrap support for F6U602 as seed ortholog is 100%.
Bootstrap support for I3LLC8 as seed ortholog is 100%.

Group of orthologs #2541. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 S.scrofa:158

H2XNL6              	100.00%		I3L738              	100.00%
Bootstrap support for H2XNL6 as seed ortholog is 100%.
Bootstrap support for I3L738 as seed ortholog is 99%.

Group of orthologs #2542. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.scrofa:105

H2XNI0              	100.00%		F1RS47              	100.00%
                    	       		O97716              	42.02%
                    	       		F1RXC4              	15.06%
Bootstrap support for H2XNI0 as seed ortholog is 100%.
Bootstrap support for F1RS47 as seed ortholog is 99%.

Group of orthologs #2543. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 S.scrofa:95

F7AVZ3              	100.00%		F1S3P6              	100.00%
                    	       		O19113              	98.06%
                    	       		F1S279              	15.30%
Bootstrap support for F7AVZ3 as seed ortholog is 62%.
Alternative seed ortholog is F6XAM7 (15 bits away from this cluster)
Bootstrap support for F1S3P6 as seed ortholog is 97%.

Group of orthologs #2544. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 S.scrofa:90

F6YAG6              	100.00%		F1SKH5              	100.00%
                    	       		F1SKH4              	91.60%
                    	       		F1RR27              	7.61%
Bootstrap support for F6YAG6 as seed ortholog is 100%.
Bootstrap support for F1SKH5 as seed ortholog is 99%.

Group of orthologs #2545. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 S.scrofa:204

F7AK31              	100.00%		F1ST93              	100.00%
                    	       		F1S1J3              	50.45%
                    	       		K7GSB2              	9.16%
Bootstrap support for F7AK31 as seed ortholog is 100%.
Bootstrap support for F1ST93 as seed ortholog is 99%.

Group of orthologs #2546. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:227

F6T453              	100.00%		F1RSR0              	100.00%
                    	       		D5HP13              	8.78%
Bootstrap support for F6T453 as seed ortholog is 99%.
Bootstrap support for F1RSR0 as seed ortholog is 100%.

Group of orthologs #2547. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 S.scrofa:74

F6V2M0              	100.00%		F1RQQ6              	100.00%
                    	       		F1RQS0              	13.40%
Bootstrap support for F6V2M0 as seed ortholog is 99%.
Bootstrap support for F1RQQ6 as seed ortholog is 96%.

Group of orthologs #2548. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 S.scrofa:298

F6YWI2              	100.00%		I6L631              	100.00%
                    	       		F1RPK5              	64.33%
Bootstrap support for F6YWI2 as seed ortholog is 100%.
Bootstrap support for I6L631 as seed ortholog is 100%.

Group of orthologs #2549. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 S.scrofa:298

F6WWY7              	100.00%		F1S6P2              	100.00%
Bootstrap support for F6WWY7 as seed ortholog is 100%.
Bootstrap support for F1S6P2 as seed ortholog is 100%.

Group of orthologs #2550. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 S.scrofa:92

F6VY76              	100.00%		F2Z4Z0              	100.00%
Bootstrap support for F6VY76 as seed ortholog is 100%.
Bootstrap support for F2Z4Z0 as seed ortholog is 99%.

Group of orthologs #2551. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:231

H2XX04              	100.00%		F1RUP0              	100.00%
Bootstrap support for H2XX04 as seed ortholog is 100%.
Bootstrap support for F1RUP0 as seed ortholog is 100%.

Group of orthologs #2552. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 S.scrofa:298

F6Q4X5              	100.00%		Q2YGT9              	100.00%
Bootstrap support for F6Q4X5 as seed ortholog is 100%.
Bootstrap support for Q2YGT9 as seed ortholog is 100%.

Group of orthologs #2553. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.scrofa:298

F6UMK9              	100.00%		I3LSM5              	100.00%
Bootstrap support for F6UMK9 as seed ortholog is 100%.
Bootstrap support for I3LSM5 as seed ortholog is 100%.

Group of orthologs #2554. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 S.scrofa:298

H2XX78              	100.00%		F1SHV1              	100.00%
Bootstrap support for H2XX78 as seed ortholog is 100%.
Bootstrap support for F1SHV1 as seed ortholog is 100%.

Group of orthologs #2555. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 S.scrofa:151

Q5IFL5              	100.00%		I3L5L7              	100.00%
                    	       		F1RS67              	79.95%
                    	       		F1RM14              	42.17%
                    	       		I3LTT4              	17.51%
Bootstrap support for Q5IFL5 as seed ortholog is 100%.
Bootstrap support for I3L5L7 as seed ortholog is 100%.

Group of orthologs #2556. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 S.scrofa:297

F6U1Z4              	100.00%		F1SMX5              	100.00%
                    	       		F1RK18              	62.33%
                    	       		I3LR97              	20.69%
Bootstrap support for F6U1Z4 as seed ortholog is 100%.
Bootstrap support for F1SMX5 as seed ortholog is 100%.

Group of orthologs #2557. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:297

F6RKK1              	100.00%		I3LEE1              	100.00%
                    	       		F1RZS7              	51.98%
Bootstrap support for F6RKK1 as seed ortholog is 99%.
Bootstrap support for I3LEE1 as seed ortholog is 100%.

Group of orthologs #2558. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 S.scrofa:94

H2Y3J8              	100.00%		F1SUM9              	100.00%
                    	       		F1RTL2              	15.55%
Bootstrap support for H2Y3J8 as seed ortholog is 100%.
Bootstrap support for F1SUM9 as seed ortholog is 98%.

Group of orthologs #2559. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 S.scrofa:190

F6ZKV3              	100.00%		F1RNQ2              	100.00%
Bootstrap support for F6ZKV3 as seed ortholog is 100%.
Bootstrap support for F1RNQ2 as seed ortholog is 100%.

Group of orthologs #2560. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 S.scrofa:297

F6RWY1              	100.00%		F1SNZ1              	100.00%
Bootstrap support for F6RWY1 as seed ortholog is 100%.
Bootstrap support for F1SNZ1 as seed ortholog is 100%.

Group of orthologs #2561. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 S.scrofa:297

F6WUH0              	100.00%		F1SIF2              	100.00%
Bootstrap support for F6WUH0 as seed ortholog is 100%.
Bootstrap support for F1SIF2 as seed ortholog is 100%.

Group of orthologs #2562. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 S.scrofa:297

H2Y279              	100.00%		F1RLV4              	100.00%
Bootstrap support for H2Y279 as seed ortholog is 65%.
Alternative seed ortholog is F6SGU7 (13 bits away from this cluster)
Bootstrap support for F1RLV4 as seed ortholog is 100%.

Group of orthologs #2563. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 S.scrofa:141

F7APD9              	100.00%		F1SHE5              	100.00%
Bootstrap support for F7APD9 as seed ortholog is 100%.
Bootstrap support for F1SHE5 as seed ortholog is 98%.

Group of orthologs #2564. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 S.scrofa:297

F7ARU3              	100.00%		F1SK87              	100.00%
Bootstrap support for F7ARU3 as seed ortholog is 100%.
Bootstrap support for F1SK87 as seed ortholog is 100%.

Group of orthologs #2565. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:182

F6WCV2              	100.00%		I3LD81              	100.00%
Bootstrap support for F6WCV2 as seed ortholog is 100%.
Bootstrap support for I3LD81 as seed ortholog is 100%.

Group of orthologs #2566. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 S.scrofa:297

H2Y3D5              	100.00%		F1RYA3              	100.00%
Bootstrap support for H2Y3D5 as seed ortholog is 100%.
Bootstrap support for F1RYA3 as seed ortholog is 100%.

Group of orthologs #2567. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 S.scrofa:297

H2XVX5              	100.00%		F1SPB1              	100.00%
Bootstrap support for H2XVX5 as seed ortholog is 100%.
Bootstrap support for F1SPB1 as seed ortholog is 100%.

Group of orthologs #2568. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 S.scrofa:297

H2XX76              	100.00%		I3LIT1              	100.00%
Bootstrap support for H2XX76 as seed ortholog is 100%.
Bootstrap support for I3LIT1 as seed ortholog is 100%.

Group of orthologs #2569. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 S.scrofa:89

F6ZZG0              	100.00%		F1SMH1              	100.00%
                    	       		F1STI6              	52.73%
Bootstrap support for F6ZZG0 as seed ortholog is 100%.
Bootstrap support for F1SMH1 as seed ortholog is 97%.

Group of orthologs #2570. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 S.scrofa:296

F6SSL3              	100.00%		F1SIX9              	100.00%
Bootstrap support for F6SSL3 as seed ortholog is 100%.
Bootstrap support for F1SIX9 as seed ortholog is 100%.

Group of orthologs #2571. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 S.scrofa:296

F6WU83              	100.00%		F1SF60              	100.00%
Bootstrap support for F6WU83 as seed ortholog is 100%.
Bootstrap support for F1SF60 as seed ortholog is 100%.

Group of orthologs #2572. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 S.scrofa:296

F7AWU8              	100.00%		F1SIS1              	100.00%
Bootstrap support for F7AWU8 as seed ortholog is 100%.
Bootstrap support for F1SIS1 as seed ortholog is 100%.

Group of orthologs #2573. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 S.scrofa:296

F6Q7D4              	100.00%		I3LQY4              	100.00%
Bootstrap support for F6Q7D4 as seed ortholog is 100%.
Bootstrap support for I3LQY4 as seed ortholog is 100%.

Group of orthologs #2574. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 S.scrofa:296

H2XZY8              	100.00%		F1RYJ1              	100.00%
Bootstrap support for H2XZY8 as seed ortholog is 100%.
Bootstrap support for F1RYJ1 as seed ortholog is 100%.

Group of orthologs #2575. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 S.scrofa:296

F6TB52              	100.00%		I3LT81              	100.00%
Bootstrap support for F6TB52 as seed ortholog is 100%.
Bootstrap support for I3LT81 as seed ortholog is 100%.

Group of orthologs #2576. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 S.scrofa:296

F6ZJB9              	100.00%		I3LSM7              	100.00%
Bootstrap support for F6ZJB9 as seed ortholog is 100%.
Bootstrap support for I3LSM7 as seed ortholog is 100%.

Group of orthologs #2577. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:118

H2XLJ3              	100.00%		Q52NJ5              	100.00%
Bootstrap support for H2XLJ3 as seed ortholog is 100%.
Bootstrap support for Q52NJ5 as seed ortholog is 100%.

Group of orthologs #2578. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 S.scrofa:295

F7A2C9              	100.00%		F1RT51              	100.00%
                    	       		I3LJJ7              	72.66%
Bootstrap support for F7A2C9 as seed ortholog is 100%.
Bootstrap support for F1RT51 as seed ortholog is 100%.

Group of orthologs #2579. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 S.scrofa:213

F6X4P6              	100.00%		F1SIG4              	100.00%
                    	       		I3L733              	15.55%
Bootstrap support for F6X4P6 as seed ortholog is 100%.
Bootstrap support for F1SIG4 as seed ortholog is 100%.

Group of orthologs #2580. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 S.scrofa:295

H2XW41              	100.00%		F1RKF3              	100.00%
                    	       		I3LC87              	100.00%
Bootstrap support for H2XW41 as seed ortholog is 100%.
Bootstrap support for F1RKF3 as seed ortholog is 100%.
Bootstrap support for I3LC87 as seed ortholog is 100%.

Group of orthologs #2581. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:295

F6TVS6              	100.00%		F1RJK2              	100.00%
Bootstrap support for F6TVS6 as seed ortholog is 100%.
Bootstrap support for F1RJK2 as seed ortholog is 100%.

Group of orthologs #2582. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 S.scrofa:65

F6W872              	100.00%		F1RHB3              	100.00%
Bootstrap support for F6W872 as seed ortholog is 100%.
Bootstrap support for F1RHB3 as seed ortholog is 97%.

Group of orthologs #2583. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 S.scrofa:295

F6SS76              	100.00%		F1RTZ0              	100.00%
Bootstrap support for F6SS76 as seed ortholog is 100%.
Bootstrap support for F1RTZ0 as seed ortholog is 100%.

Group of orthologs #2584. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 S.scrofa:295

F7BMQ6              	100.00%		F1RM23              	100.00%
Bootstrap support for F7BMQ6 as seed ortholog is 100%.
Bootstrap support for F1RM23 as seed ortholog is 100%.

Group of orthologs #2585. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 S.scrofa:109

H2XPD1              	100.00%		F1SE21              	100.00%
Bootstrap support for H2XPD1 as seed ortholog is 100%.
Bootstrap support for F1SE21 as seed ortholog is 99%.

Group of orthologs #2586. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 S.scrofa:295

F6ZUM5              	100.00%		I3L6W6              	100.00%
Bootstrap support for F6ZUM5 as seed ortholog is 100%.
Bootstrap support for I3L6W6 as seed ortholog is 100%.

Group of orthologs #2587. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 S.scrofa:59

F6ZIB9              	100.00%		I3L955              	100.00%
Bootstrap support for F6ZIB9 as seed ortholog is 100%.
Bootstrap support for I3L955 as seed ortholog is 97%.

Group of orthologs #2588. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 S.scrofa:295

F6QQ08              	100.00%		Q56P27              	100.00%
Bootstrap support for F6QQ08 as seed ortholog is 100%.
Bootstrap support for Q56P27 as seed ortholog is 100%.

Group of orthologs #2589. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:55

F6RRU7              	100.00%		F1RXD8              	100.00%
F6RLA4              	51.66%		I3L740              	6.76%
Bootstrap support for F6RRU7 as seed ortholog is 99%.
Bootstrap support for F1RXD8 as seed ortholog is 83%.

Group of orthologs #2590. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.scrofa:218

F6X184              	100.00%		P09858              	100.00%
                    	       		F1S9L0              	78.46%
                    	       		P15203              	27.21%
Bootstrap support for F6X184 as seed ortholog is 100%.
Bootstrap support for P09858 as seed ortholog is 100%.

Group of orthologs #2591. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 S.scrofa:87

F6RI21              	100.00%		F1SEX1              	100.00%
F6RJA6              	22.76%		
Bootstrap support for F6RI21 as seed ortholog is 65%.
Alternative seed ortholog is F6XAM7 (20 bits away from this cluster)
Bootstrap support for F1SEX1 as seed ortholog is 93%.

Group of orthologs #2592. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 S.scrofa:294

F6R180              	100.00%		F1RXH0              	100.00%
Bootstrap support for F6R180 as seed ortholog is 100%.
Bootstrap support for F1RXH0 as seed ortholog is 100%.

Group of orthologs #2593. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 S.scrofa:294

F6XGT9              	100.00%		F1S369              	100.00%
Bootstrap support for F6XGT9 as seed ortholog is 100%.
Bootstrap support for F1S369 as seed ortholog is 100%.

Group of orthologs #2594. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 S.scrofa:294

F6WSZ7              	100.00%		F1SSM7              	100.00%
Bootstrap support for F6WSZ7 as seed ortholog is 100%.
Bootstrap support for F1SSM7 as seed ortholog is 100%.

Group of orthologs #2595. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 S.scrofa:10

F6U088              	100.00%		I3LCI1              	100.00%
Bootstrap support for F6U088 as seed ortholog is 100%.
Bootstrap support for I3LCI1 as seed ortholog is 67%.
Alternative seed ortholog is F1SRV9 (10 bits away from this cluster)

Group of orthologs #2596. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 S.scrofa:128

H2XLH6              	100.00%		I3L6E0              	100.00%
Bootstrap support for H2XLH6 as seed ortholog is 54%.
Alternative seed ortholog is F7BIB7 (5 bits away from this cluster)
Bootstrap support for I3L6E0 as seed ortholog is 99%.

Group of orthologs #2597. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 S.scrofa:230

Q4H3S8              	100.00%		F1SKV7              	100.00%
Bootstrap support for Q4H3S8 as seed ortholog is 100%.
Bootstrap support for F1SKV7 as seed ortholog is 100%.

Group of orthologs #2598. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 S.scrofa:73

F6XND0              	100.00%		Q4LE85              	100.00%
Bootstrap support for F6XND0 as seed ortholog is 99%.
Bootstrap support for Q4LE85 as seed ortholog is 99%.

Group of orthologs #2599. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 S.scrofa:294

Q1RL34              	100.00%		I3L8A1              	100.00%
Bootstrap support for Q1RL34 as seed ortholog is 100%.
Bootstrap support for I3L8A1 as seed ortholog is 100%.

Group of orthologs #2600. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 S.scrofa:224

Q1RLI9              	100.00%		I3L8U3              	100.00%
                    	       		F1RMN8              	51.93%
                    	       		F1RX21              	45.73%
Bootstrap support for Q1RLI9 as seed ortholog is 66%.
Alternative seed ortholog is F7BEA7 (27 bits away from this cluster)
Bootstrap support for I3L8U3 as seed ortholog is 99%.

Group of orthologs #2601. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:293

F6SXN2              	100.00%		F1SM94              	100.00%
                    	       		F1S830              	14.72%
Bootstrap support for F6SXN2 as seed ortholog is 96%.
Bootstrap support for F1SM94 as seed ortholog is 100%.

Group of orthologs #2602. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 S.scrofa:167

H2XV16              	100.00%		F1RXB8              	100.00%
                    	       		F1RFW6              	16.04%
Bootstrap support for H2XV16 as seed ortholog is 100%.
Bootstrap support for F1RXB8 as seed ortholog is 100%.

Group of orthologs #2603. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 S.scrofa:169

H2XYW2              	100.00%		F1S3H3              	100.00%
                    	       		I3LH72              	17.92%
Bootstrap support for H2XYW2 as seed ortholog is 100%.
Bootstrap support for F1S3H3 as seed ortholog is 99%.

Group of orthologs #2604. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 S.scrofa:293

F6RIG9              	100.00%		F1SIQ0              	100.00%
Bootstrap support for F6RIG9 as seed ortholog is 100%.
Bootstrap support for F1SIQ0 as seed ortholog is 100%.

Group of orthologs #2605. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 S.scrofa:293

F6V6L4              	100.00%		F1SM09              	100.00%
Bootstrap support for F6V6L4 as seed ortholog is 100%.
Bootstrap support for F1SM09 as seed ortholog is 100%.

Group of orthologs #2606. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 S.scrofa:7

H2XPN7              	100.00%		Q9GLV6              	100.00%
Bootstrap support for H2XPN7 as seed ortholog is 100%.
Bootstrap support for Q9GLV6 as seed ortholog is 45%.
Alternative seed ortholog is F1S0P6 (7 bits away from this cluster)

Group of orthologs #2607. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:292

F6TI40              	100.00%		F1S7E1              	100.00%
H2XMY4              	9.34%		
F6TI69              	8.11%		
Bootstrap support for F6TI40 as seed ortholog is 100%.
Bootstrap support for F1S7E1 as seed ortholog is 100%.

Group of orthologs #2608. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.scrofa:292

F6WLK6              	100.00%		F1RUZ6              	100.00%
                    	       		I3LGB1              	16.19%
Bootstrap support for F6WLK6 as seed ortholog is 100%.
Bootstrap support for F1RUZ6 as seed ortholog is 100%.

Group of orthologs #2609. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.scrofa:292

F7BD35              	100.00%		F1RVP9              	100.00%
                    	       		I3L6J8              	12.27%
Bootstrap support for F7BD35 as seed ortholog is 100%.
Bootstrap support for F1RVP9 as seed ortholog is 100%.

Group of orthologs #2610. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.scrofa:292

F6V3T4              	100.00%		F1SQD9              	100.00%
                    	       		F1RXR2              	13.87%
Bootstrap support for F6V3T4 as seed ortholog is 100%.
Bootstrap support for F1SQD9 as seed ortholog is 100%.

Group of orthologs #2611. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.scrofa:292

H2XZ45              	100.00%		F1RFS9              	100.00%
                    	       		I3LVC7              	29.68%
Bootstrap support for H2XZ45 as seed ortholog is 100%.
Bootstrap support for F1RFS9 as seed ortholog is 100%.

Group of orthologs #2612. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.scrofa:292

F6QWW6              	100.00%		A2TLM1              	100.00%
Bootstrap support for F6QWW6 as seed ortholog is 100%.
Bootstrap support for A2TLM1 as seed ortholog is 100%.

Group of orthologs #2613. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:191

F6ZKW1              	100.00%		F1RFQ7              	100.00%
Bootstrap support for F6ZKW1 as seed ortholog is 100%.
Bootstrap support for F1RFQ7 as seed ortholog is 100%.

Group of orthologs #2614. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.scrofa:137

F6UQX1              	100.00%		F1RZP2              	100.00%
Bootstrap support for F6UQX1 as seed ortholog is 100%.
Bootstrap support for F1RZP2 as seed ortholog is 99%.

Group of orthologs #2615. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.scrofa:87

H2XNC3              	100.00%		F1RF39              	100.00%
Bootstrap support for H2XNC3 as seed ortholog is 100%.
Bootstrap support for F1RF39 as seed ortholog is 99%.

Group of orthologs #2616. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.scrofa:204

H2XJY3              	100.00%		F1RX85              	100.00%
Bootstrap support for H2XJY3 as seed ortholog is 100%.
Bootstrap support for F1RX85 as seed ortholog is 99%.

Group of orthologs #2617. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.scrofa:292

F7BQA9              	100.00%		F1SE65              	100.00%
Bootstrap support for F7BQA9 as seed ortholog is 100%.
Bootstrap support for F1SE65 as seed ortholog is 100%.

Group of orthologs #2618. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.scrofa:292

F7A7M7              	100.00%		F1ST05              	100.00%
Bootstrap support for F7A7M7 as seed ortholog is 100%.
Bootstrap support for F1ST05 as seed ortholog is 100%.

Group of orthologs #2619. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:109

F6ZV29              	100.00%		F6Q0Q4              	100.00%
Bootstrap support for F6ZV29 as seed ortholog is 99%.
Bootstrap support for F6Q0Q4 as seed ortholog is 98%.

Group of orthologs #2620. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:148

F6S6V5              	100.00%		Q52NJ4              	100.00%
Bootstrap support for F6S6V5 as seed ortholog is 100%.
Bootstrap support for Q52NJ4 as seed ortholog is 100%.

Group of orthologs #2621. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 S.scrofa:292

F6TKL9              	100.00%		O77591              	100.00%
Bootstrap support for F6TKL9 as seed ortholog is 100%.
Bootstrap support for O77591 as seed ortholog is 100%.

Group of orthologs #2622. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 S.scrofa:164

H2XJL6              	100.00%		Q8WNV7              	100.00%
Bootstrap support for H2XJL6 as seed ortholog is 100%.
Bootstrap support for Q8WNV7 as seed ortholog is 100%.

Group of orthologs #2623. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 S.scrofa:291

F6STW3              	100.00%		F1RZ15              	100.00%
                    	       		I3LN07              	100.00%
Bootstrap support for F6STW3 as seed ortholog is 100%.
Bootstrap support for F1RZ15 as seed ortholog is 100%.
Bootstrap support for I3LN07 as seed ortholog is 100%.

Group of orthologs #2624. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 S.scrofa:86

H2XSU2              	100.00%		I3LKZ2              	100.00%
                    	       		I3LS68              	18.20%
Bootstrap support for H2XSU2 as seed ortholog is 100%.
Bootstrap support for I3LKZ2 as seed ortholog is 98%.

Group of orthologs #2625. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 S.scrofa:178

F6XTV8              	100.00%		F1RSG8              	100.00%
Bootstrap support for F6XTV8 as seed ortholog is 100%.
Bootstrap support for F1RSG8 as seed ortholog is 100%.

Group of orthologs #2626. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 S.scrofa:291

F6W3C3              	100.00%		I3LL98              	100.00%
Bootstrap support for F6W3C3 as seed ortholog is 100%.
Bootstrap support for I3LL98 as seed ortholog is 100%.

Group of orthologs #2627. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 S.scrofa:291

F7B0X0              	100.00%		I3LAW0              	100.00%
Bootstrap support for F7B0X0 as seed ortholog is 100%.
Bootstrap support for I3LAW0 as seed ortholog is 100%.

Group of orthologs #2628. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 S.scrofa:291

F6WQE3              	100.00%		Q8MIZ3              	100.00%
Bootstrap support for F6WQE3 as seed ortholog is 100%.
Bootstrap support for Q8MIZ3 as seed ortholog is 100%.

Group of orthologs #2629. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 S.scrofa:291

F6Y011              	100.00%		Q9TV69              	100.00%
Bootstrap support for F6Y011 as seed ortholog is 100%.
Bootstrap support for Q9TV69 as seed ortholog is 100%.

Group of orthologs #2630. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:290

F6R2P7              	100.00%		F1SJR4              	100.00%
                    	       		F1SIB9              	30.58%
                    	       		I3LIL1              	16.80%
Bootstrap support for F6R2P7 as seed ortholog is 91%.
Bootstrap support for F1SJR4 as seed ortholog is 100%.

Group of orthologs #2631. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 S.scrofa:290

F6PJ79              	100.00%		F1RRW0              	100.00%
                    	       		F1RTT1              	21.77%
Bootstrap support for F6PJ79 as seed ortholog is 100%.
Bootstrap support for F1RRW0 as seed ortholog is 100%.

Group of orthologs #2632. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 S.scrofa:290

F6WI10              	100.00%		I3LP86              	100.00%
                    	       		I3LJQ6              	48.15%
Bootstrap support for F6WI10 as seed ortholog is 70%.
Alternative seed ortholog is H2XS41 (30 bits away from this cluster)
Bootstrap support for I3LP86 as seed ortholog is 100%.

Group of orthologs #2633. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 S.scrofa:290

H2XUS4              	100.00%		O02858              	100.00%
                    	       		B0FPB3              	28.19%
Bootstrap support for H2XUS4 as seed ortholog is 100%.
Bootstrap support for O02858 as seed ortholog is 100%.

Group of orthologs #2634. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 S.scrofa:290

F6TAD8              	100.00%		F1RFR4              	100.00%
Bootstrap support for F6TAD8 as seed ortholog is 100%.
Bootstrap support for F1RFR4 as seed ortholog is 100%.

Group of orthologs #2635. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 S.scrofa:290

F6VKX1              	100.00%		F1S0W2              	100.00%
Bootstrap support for F6VKX1 as seed ortholog is 100%.
Bootstrap support for F1S0W2 as seed ortholog is 100%.

Group of orthologs #2636. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 S.scrofa:42

F6X034              	100.00%		F1RYX0              	100.00%
Bootstrap support for F6X034 as seed ortholog is 100%.
Bootstrap support for F1RYX0 as seed ortholog is 97%.

Group of orthologs #2637. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.scrofa:145

F6V5G2              	100.00%		F1SBY7              	100.00%
Bootstrap support for F6V5G2 as seed ortholog is 99%.
Bootstrap support for F1SBY7 as seed ortholog is 99%.

Group of orthologs #2638. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 S.scrofa:290

H2XSI8              	100.00%		F1S572              	100.00%
Bootstrap support for H2XSI8 as seed ortholog is 100%.
Bootstrap support for F1S572 as seed ortholog is 100%.

Group of orthologs #2639. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 S.scrofa:290

F6ZSI5              	100.00%		I3LDP9              	100.00%
Bootstrap support for F6ZSI5 as seed ortholog is 100%.
Bootstrap support for I3LDP9 as seed ortholog is 100%.

Group of orthologs #2640. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 S.scrofa:290

F6SNL0              	100.00%		Q29205              	100.00%
Bootstrap support for F6SNL0 as seed ortholog is 100%.
Bootstrap support for Q29205 as seed ortholog is 100%.

Group of orthologs #2641. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 S.scrofa:188

Q1RLG5              	100.00%		K7GM42              	100.00%
Bootstrap support for Q1RLG5 as seed ortholog is 100%.
Bootstrap support for K7GM42 as seed ortholog is 100%.

Group of orthologs #2642. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 S.scrofa:25

F7AQZ5              	100.00%		F1RVR1              	100.00%
F7AR10              	78.80%		F1SS84              	8.68%
Bootstrap support for F7AQZ5 as seed ortholog is 100%.
Bootstrap support for F1RVR1 as seed ortholog is 71%.
Alternative seed ortholog is Q28992 (25 bits away from this cluster)

Group of orthologs #2643. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 S.scrofa:21

F6X0N8              	100.00%		F1SM56              	100.00%
L7N0S6              	64.00%		
Bootstrap support for F6X0N8 as seed ortholog is 100%.
Bootstrap support for F1SM56 as seed ortholog is 86%.

Group of orthologs #2644. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 S.scrofa:128

Q4H2V9              	100.00%		F1SQL8              	100.00%
                    	       		B0LXP3              	7.75%
Bootstrap support for Q4H2V9 as seed ortholog is 100%.
Bootstrap support for F1SQL8 as seed ortholog is 99%.

Group of orthologs #2645. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 S.scrofa:289

H2XYL3              	100.00%		I3LCI0              	100.00%
                    	       		I3LBE4              	99.38%
Bootstrap support for H2XYL3 as seed ortholog is 100%.
Bootstrap support for I3LCI0 as seed ortholog is 100%.

Group of orthologs #2646. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 S.scrofa:289

H2XVJ7              	100.00%		I3LRK9              	100.00%
                    	       		I3LLF3              	56.75%
Bootstrap support for H2XVJ7 as seed ortholog is 100%.
Bootstrap support for I3LRK9 as seed ortholog is 100%.

Group of orthologs #2647. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 S.scrofa:223

F6RGX1              	100.00%		F1RJF5              	100.00%
Bootstrap support for F6RGX1 as seed ortholog is 100%.
Bootstrap support for F1RJF5 as seed ortholog is 100%.

Group of orthologs #2648. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 S.scrofa:289

F6SF69              	100.00%		F1RXR3              	100.00%
Bootstrap support for F6SF69 as seed ortholog is 100%.
Bootstrap support for F1RXR3 as seed ortholog is 100%.

Group of orthologs #2649. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 S.scrofa:40

F6T2C1              	100.00%		F2Z5G3              	100.00%
Bootstrap support for F6T2C1 as seed ortholog is 45%.
Alternative seed ortholog is F6T2A6 (1 bits away from this cluster)
Bootstrap support for F2Z5G3 as seed ortholog is 99%.

Group of orthologs #2650. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 S.scrofa:289

H2XWR8              	100.00%		F1RLG6              	100.00%
Bootstrap support for H2XWR8 as seed ortholog is 100%.
Bootstrap support for F1RLG6 as seed ortholog is 100%.

Group of orthologs #2651. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 S.scrofa:289

F6Z768              	100.00%		I3LFY2              	100.00%
Bootstrap support for F6Z768 as seed ortholog is 100%.
Bootstrap support for I3LFY2 as seed ortholog is 100%.

Group of orthologs #2652. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 S.scrofa:204

F6XGG4              	100.00%		I3LSI3              	100.00%
Bootstrap support for F6XGG4 as seed ortholog is 100%.
Bootstrap support for I3LSI3 as seed ortholog is 100%.

Group of orthologs #2653. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 S.scrofa:220

F6X6Z3              	100.00%		F1RPR6              	100.00%
                    	       		F1SLB3              	29.18%
Bootstrap support for F6X6Z3 as seed ortholog is 100%.
Bootstrap support for F1RPR6 as seed ortholog is 100%.

Group of orthologs #2654. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.scrofa:193

F6S968              	100.00%		F1SRU3              	100.00%
                    	       		F1SF52              	21.77%
Bootstrap support for F6S968 as seed ortholog is 100%.
Bootstrap support for F1SRU3 as seed ortholog is 100%.

Group of orthologs #2655. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 S.scrofa:288

F6T7J7              	100.00%		F1S0C9              	100.00%
Bootstrap support for F6T7J7 as seed ortholog is 100%.
Bootstrap support for F1S0C9 as seed ortholog is 100%.

Group of orthologs #2656. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.scrofa:217

F6XMT9              	100.00%		F1RPL9              	100.00%
Bootstrap support for F6XMT9 as seed ortholog is 100%.
Bootstrap support for F1RPL9 as seed ortholog is 100%.

Group of orthologs #2657. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.scrofa:288

F7AHV7              	100.00%		F1S750              	100.00%
Bootstrap support for F7AHV7 as seed ortholog is 100%.
Bootstrap support for F1S750 as seed ortholog is 100%.

Group of orthologs #2658. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 S.scrofa:288

H2XY27              	100.00%		F1RJK0              	100.00%
Bootstrap support for H2XY27 as seed ortholog is 100%.
Bootstrap support for F1RJK0 as seed ortholog is 100%.

Group of orthologs #2659. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 S.scrofa:288

H2XNJ5              	100.00%		F1SQ87              	100.00%
Bootstrap support for H2XNJ5 as seed ortholog is 100%.
Bootstrap support for F1SQ87 as seed ortholog is 100%.

Group of orthologs #2660. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 S.scrofa:159

F6ZPY0              	100.00%		I3LKF2              	100.00%
Bootstrap support for F6ZPY0 as seed ortholog is 100%.
Bootstrap support for I3LKF2 as seed ortholog is 98%.

Group of orthologs #2661. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 S.scrofa:287

F6QPP6              	100.00%		F1RS10              	100.00%
                    	       		I3L550              	57.37%
Bootstrap support for F6QPP6 as seed ortholog is 100%.
Bootstrap support for F1RS10 as seed ortholog is 100%.

Group of orthologs #2662. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 S.scrofa:287

F6X2D7              	100.00%		F1RQM7              	100.00%
                    	       		F1STR4              	17.66%
Bootstrap support for F6X2D7 as seed ortholog is 100%.
Bootstrap support for F1RQM7 as seed ortholog is 100%.

Group of orthologs #2663. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 S.scrofa:70

F6QH95              	100.00%		F1SRU8              	100.00%
F6UNA3              	22.44%		
Bootstrap support for F6QH95 as seed ortholog is 100%.
Bootstrap support for F1SRU8 as seed ortholog is 96%.

Group of orthologs #2664. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:114

F6VRB9              	100.00%		F1SUF1              	100.00%
                    	       		F1S112              	16.06%
Bootstrap support for F6VRB9 as seed ortholog is 100%.
Bootstrap support for F1SUF1 as seed ortholog is 99%.

Group of orthologs #2665. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.scrofa:59

F6SBR0              	100.00%		I3LH60              	100.00%
                    	       		Q06AU2              	42.86%
Bootstrap support for F6SBR0 as seed ortholog is 100%.
Bootstrap support for I3LH60 as seed ortholog is 99%.

Group of orthologs #2666. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 S.scrofa:287

F6ZHA2              	100.00%		F1SVB4              	100.00%
                    	       		I3LFS1              	95.65%
Bootstrap support for F6ZHA2 as seed ortholog is 100%.
Bootstrap support for F1SVB4 as seed ortholog is 100%.

Group of orthologs #2667. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 S.scrofa:191

F7ART8              	100.00%		I3L988              	100.00%
                    	       		F1SRY9              	37.63%
Bootstrap support for F7ART8 as seed ortholog is 100%.
Bootstrap support for I3L988 as seed ortholog is 100%.

Group of orthologs #2668. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 S.scrofa:287

F6PIG9              	100.00%		F1RSP0              	100.00%
Bootstrap support for F6PIG9 as seed ortholog is 100%.
Bootstrap support for F1RSP0 as seed ortholog is 100%.

Group of orthologs #2669. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 S.scrofa:287

F6QRX3              	100.00%		F1RRY6              	100.00%
Bootstrap support for F6QRX3 as seed ortholog is 100%.
Bootstrap support for F1RRY6 as seed ortholog is 100%.

Group of orthologs #2670. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 S.scrofa:287

H2XX98              	100.00%		F1RFD2              	100.00%
Bootstrap support for H2XX98 as seed ortholog is 100%.
Bootstrap support for F1RFD2 as seed ortholog is 100%.

Group of orthologs #2671. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 S.scrofa:287

F7AG49              	100.00%		I3L855              	100.00%
Bootstrap support for F7AG49 as seed ortholog is 100%.
Bootstrap support for I3L855 as seed ortholog is 100%.

Group of orthologs #2672. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 S.scrofa:287

F6Z3Y4              	100.00%		I3LFB1              	100.00%
Bootstrap support for F6Z3Y4 as seed ortholog is 100%.
Bootstrap support for I3LFB1 as seed ortholog is 100%.

Group of orthologs #2673. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 S.scrofa:287

Q4H3P5              	100.00%		F1S6T2              	100.00%
Bootstrap support for Q4H3P5 as seed ortholog is 100%.
Bootstrap support for F1S6T2 as seed ortholog is 100%.

Group of orthologs #2674. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:287

H2XQU6              	100.00%		I3LF44              	100.00%
Bootstrap support for H2XQU6 as seed ortholog is 99%.
Bootstrap support for I3LF44 as seed ortholog is 100%.

Group of orthologs #2675. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 S.scrofa:287

H2Y2A0              	100.00%		F2Z5G7              	100.00%
Bootstrap support for H2Y2A0 as seed ortholog is 100%.
Bootstrap support for F2Z5G7 as seed ortholog is 100%.

Group of orthologs #2676. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:195

H2XMB6              	100.00%		I3LSZ1              	100.00%
Bootstrap support for H2XMB6 as seed ortholog is 100%.
Bootstrap support for I3LSZ1 as seed ortholog is 100%.

Group of orthologs #2677. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 S.scrofa:286

H2XR44              	100.00%		F1SCY4              	100.00%
                    	       		F1SCZ0              	39.23%
                    	       		F1SCZ2              	30.47%
Bootstrap support for H2XR44 as seed ortholog is 52%.
Alternative seed ortholog is F6UDM9 (4 bits away from this cluster)
Bootstrap support for F1SCY4 as seed ortholog is 100%.

Group of orthologs #2678. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 S.scrofa:53

Q4H3F5              	100.00%		Q865U9              	100.00%
                    	       		F1RUM8              	26.63%
Bootstrap support for Q4H3F5 as seed ortholog is 100%.
Bootstrap support for Q865U9 as seed ortholog is 73%.
Alternative seed ortholog is I3LEA0 (53 bits away from this cluster)

Group of orthologs #2679. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 S.scrofa:234

F6TLE4              	100.00%		F1RFR2              	100.00%
Bootstrap support for F6TLE4 as seed ortholog is 100%.
Bootstrap support for F1RFR2 as seed ortholog is 100%.

Group of orthologs #2680. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 S.scrofa:286

F6SKY6              	100.00%		F1S8S1              	100.00%
Bootstrap support for F6SKY6 as seed ortholog is 100%.
Bootstrap support for F1S8S1 as seed ortholog is 100%.

Group of orthologs #2681. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 S.scrofa:286

F6SXF0              	100.00%		F1S8F7              	100.00%
Bootstrap support for F6SXF0 as seed ortholog is 100%.
Bootstrap support for F1S8F7 as seed ortholog is 100%.

Group of orthologs #2682. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 S.scrofa:222

F7ALS7              	100.00%		F1RGN7              	100.00%
Bootstrap support for F7ALS7 as seed ortholog is 100%.
Bootstrap support for F1RGN7 as seed ortholog is 100%.

Group of orthologs #2683. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 S.scrofa:286

F6PM34              	100.00%		I3L640              	100.00%
Bootstrap support for F6PM34 as seed ortholog is 100%.
Bootstrap support for I3L640 as seed ortholog is 100%.

Group of orthologs #2684. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 S.scrofa:116

F6V2A4              	100.00%		F1SL44              	100.00%
Bootstrap support for F6V2A4 as seed ortholog is 100%.
Bootstrap support for F1SL44 as seed ortholog is 99%.

Group of orthologs #2685. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 S.scrofa:224

H2Y010              	100.00%		I3LQG9              	100.00%
Bootstrap support for H2Y010 as seed ortholog is 100%.
Bootstrap support for I3LQG9 as seed ortholog is 100%.

Group of orthologs #2686. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:30

F6S855              	100.00%		F1SCT9              	100.00%
F6XUY3              	51.81%		
F6S880              	51.20%		
F6W3Q9              	21.99%		
Bootstrap support for F6S855 as seed ortholog is 99%.
Bootstrap support for F1SCT9 as seed ortholog is 80%.

Group of orthologs #2687. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 S.scrofa:139

H2Y1M2              	100.00%		F1SFX5              	100.00%
                    	       		I3LGM7              	6.70%
Bootstrap support for H2Y1M2 as seed ortholog is 100%.
Bootstrap support for F1SFX5 as seed ortholog is 99%.

Group of orthologs #2688. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 S.scrofa:285

F6S0N6              	100.00%		F1S194              	100.00%
Bootstrap support for F6S0N6 as seed ortholog is 100%.
Bootstrap support for F1S194 as seed ortholog is 100%.

Group of orthologs #2689. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 S.scrofa:285

F6SSN4              	100.00%		F2Z530              	100.00%
Bootstrap support for F6SSN4 as seed ortholog is 100%.
Bootstrap support for F2Z530 as seed ortholog is 100%.

Group of orthologs #2690. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 S.scrofa:285

F6X2Y1              	100.00%		F1SI58              	100.00%
Bootstrap support for F6X2Y1 as seed ortholog is 100%.
Bootstrap support for F1SI58 as seed ortholog is 100%.

Group of orthologs #2691. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.scrofa:104

H2XKN2              	100.00%		F1SAP1              	100.00%
Bootstrap support for H2XKN2 as seed ortholog is 100%.
Bootstrap support for F1SAP1 as seed ortholog is 99%.

Group of orthologs #2692. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 S.scrofa:65

F7B496              	100.00%		F1STF7              	100.00%
Bootstrap support for F7B496 as seed ortholog is 100%.
Bootstrap support for F1STF7 as seed ortholog is 97%.

Group of orthologs #2693. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 S.scrofa:285

H2XPL3              	100.00%		F1ST81              	100.00%
Bootstrap support for H2XPL3 as seed ortholog is 100%.
Bootstrap support for F1ST81 as seed ortholog is 100%.

Group of orthologs #2694. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 S.scrofa:285

Q8I7E3              	100.00%		F1SQE6              	100.00%
Bootstrap support for Q8I7E3 as seed ortholog is 100%.
Bootstrap support for F1SQE6 as seed ortholog is 100%.

Group of orthologs #2695. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:31

F6PK93              	100.00%		I3LRY8              	100.00%
F6UPT3              	17.59%		F1RTA9              	89.49%
Bootstrap support for F6PK93 as seed ortholog is 95%.
Bootstrap support for I3LRY8 as seed ortholog is 73%.
Alternative seed ortholog is Q7YRB2 (31 bits away from this cluster)

Group of orthologs #2696. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 S.scrofa:214

F6QH89              	100.00%		F1RJ54              	100.00%
                    	       		F1RKG5              	19.33%
Bootstrap support for F6QH89 as seed ortholog is 100%.
Bootstrap support for F1RJ54 as seed ortholog is 100%.

Group of orthologs #2697. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.scrofa:79

F6XXY5              	100.00%		F1RN13              	100.00%
                    	       		F1S8G8              	39.29%
Bootstrap support for F6XXY5 as seed ortholog is 100%.
Bootstrap support for F1RN13 as seed ortholog is 99%.

Group of orthologs #2698. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 S.scrofa:284

F6SKS5              	100.00%		F1SES4              	100.00%
Bootstrap support for F6SKS5 as seed ortholog is 100%.
Bootstrap support for F1SES4 as seed ortholog is 100%.

Group of orthologs #2699. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 S.scrofa:284

F6PPH5              	100.00%		F1STR6              	100.00%
Bootstrap support for F6PPH5 as seed ortholog is 100%.
Bootstrap support for F1STR6 as seed ortholog is 100%.

Group of orthologs #2700. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 S.scrofa:284

F6ZCF4              	100.00%		F1RXU6              	100.00%
Bootstrap support for F6ZCF4 as seed ortholog is 100%.
Bootstrap support for F1RXU6 as seed ortholog is 100%.

Group of orthologs #2701. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 S.scrofa:284

H2XT29              	100.00%		F1RJY0              	100.00%
Bootstrap support for H2XT29 as seed ortholog is 100%.
Bootstrap support for F1RJY0 as seed ortholog is 100%.

Group of orthologs #2702. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:189

F6Z241              	100.00%		F1SFS0              	100.00%
Bootstrap support for F6Z241 as seed ortholog is 100%.
Bootstrap support for F1SFS0 as seed ortholog is 100%.

Group of orthologs #2703. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 S.scrofa:284

F7B499              	100.00%		F1SBJ3              	100.00%
Bootstrap support for F7B499 as seed ortholog is 100%.
Bootstrap support for F1SBJ3 as seed ortholog is 100%.

Group of orthologs #2704. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 S.scrofa:284

F6S7T3              	100.00%		Q767M2              	100.00%
Bootstrap support for F6S7T3 as seed ortholog is 100%.
Bootstrap support for Q767M2 as seed ortholog is 100%.

Group of orthologs #2705. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.scrofa:42

H2XZG7              	100.00%		F2Z5U5              	100.00%
Bootstrap support for H2XZG7 as seed ortholog is 100%.
Bootstrap support for F2Z5U5 as seed ortholog is 99%.

Group of orthologs #2706. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 S.scrofa:283

F6YDH8              	100.00%		F1SJU9              	100.00%
                    	       		I3LKE2              	80.06%
Bootstrap support for F6YDH8 as seed ortholog is 100%.
Bootstrap support for F1SJU9 as seed ortholog is 100%.

Group of orthologs #2707. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 S.scrofa:283

C4B8X0              	100.00%		F1RPV8              	100.00%
Bootstrap support for C4B8X0 as seed ortholog is 100%.
Bootstrap support for F1RPV8 as seed ortholog is 100%.

Group of orthologs #2708. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.scrofa:93

F6RP59              	100.00%		F1RPV3              	100.00%
Bootstrap support for F6RP59 as seed ortholog is 99%.
Bootstrap support for F1RPV3 as seed ortholog is 99%.

Group of orthologs #2709. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.scrofa:283

F6S8Y1              	100.00%		F1RZA1              	100.00%
Bootstrap support for F6S8Y1 as seed ortholog is 100%.
Bootstrap support for F1RZA1 as seed ortholog is 100%.

Group of orthologs #2710. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 S.scrofa:283

F6SPY1              	100.00%		F1SHE9              	100.00%
Bootstrap support for F6SPY1 as seed ortholog is 100%.
Bootstrap support for F1SHE9 as seed ortholog is 100%.

Group of orthologs #2711. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 S.scrofa:283

F6WWW9              	100.00%		I3LCJ3              	100.00%
Bootstrap support for F6WWW9 as seed ortholog is 100%.
Bootstrap support for I3LCJ3 as seed ortholog is 100%.

Group of orthologs #2712. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.scrofa:188

F6Z7L3              	100.00%		F1RP24              	100.00%
                    	       		F1SKC9              	41.93%
                    	       		F1RQ88              	34.69%
Bootstrap support for F6Z7L3 as seed ortholog is 100%.
Bootstrap support for F1RP24 as seed ortholog is 100%.

Group of orthologs #2713. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.scrofa:70

Q4H3J8              	100.00%		F1RY03              	100.00%
                    	       		F1SV27              	17.86%
                    	       		F1SU18              	14.56%
Bootstrap support for Q4H3J8 as seed ortholog is 100%.
Bootstrap support for F1RY03 as seed ortholog is 98%.

Group of orthologs #2714. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.scrofa:192

F6TXZ0              	100.00%		F1RWI1              	100.00%
                    	       		I3LEM4              	86.49%
Bootstrap support for F6TXZ0 as seed ortholog is 100%.
Bootstrap support for F1RWI1 as seed ortholog is 99%.

Group of orthologs #2715. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.scrofa:135

F6XD08              	100.00%		F1RX59              	100.00%
                    	       		F1SCW9              	69.67%
Bootstrap support for F6XD08 as seed ortholog is 100%.
Bootstrap support for F1RX59 as seed ortholog is 99%.

Group of orthologs #2716. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.scrofa:182

F6TSI9              	100.00%		F1SB98              	100.00%
                    	       		F1SG69              	16.84%
Bootstrap support for F6TSI9 as seed ortholog is 100%.
Bootstrap support for F1SB98 as seed ortholog is 100%.

Group of orthologs #2717. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.scrofa:282

F6SFI7              	100.00%		Q684M2              	100.00%
                    	       		F1S810              	17.21%
Bootstrap support for F6SFI7 as seed ortholog is 100%.
Bootstrap support for Q684M2 as seed ortholog is 100%.

Group of orthologs #2718. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 S.scrofa:282

F6WVH9              	100.00%		F1RN92              	100.00%
Bootstrap support for F6WVH9 as seed ortholog is 66%.
Alternative seed ortholog is F6V5Y1 (18 bits away from this cluster)
Bootstrap support for F1RN92 as seed ortholog is 100%.

Group of orthologs #2719. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 S.scrofa:282

F6X0R0              	100.00%		F1RWS8              	100.00%
Bootstrap support for F6X0R0 as seed ortholog is 100%.
Bootstrap support for F1RWS8 as seed ortholog is 100%.

Group of orthologs #2720. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.scrofa:282

F6SCG1              	100.00%		F1SPZ1              	100.00%
Bootstrap support for F6SCG1 as seed ortholog is 100%.
Bootstrap support for F1SPZ1 as seed ortholog is 100%.

Group of orthologs #2721. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.scrofa:282

F6W790              	100.00%		F1SFI8              	100.00%
Bootstrap support for F6W790 as seed ortholog is 100%.
Bootstrap support for F1SFI8 as seed ortholog is 100%.

Group of orthologs #2722. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.scrofa:282

F6WGS7              	100.00%		F1SNG8              	100.00%
Bootstrap support for F6WGS7 as seed ortholog is 100%.
Bootstrap support for F1SNG8 as seed ortholog is 100%.

Group of orthologs #2723. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.scrofa:235

F6VUL9              	100.00%		F2Z5U0              	100.00%
Bootstrap support for F6VUL9 as seed ortholog is 100%.
Bootstrap support for F2Z5U0 as seed ortholog is 100%.

Group of orthologs #2724. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 S.scrofa:224

H2XQ29              	100.00%		F1S2W4              	100.00%
Bootstrap support for H2XQ29 as seed ortholog is 100%.
Bootstrap support for F1S2W4 as seed ortholog is 100%.

Group of orthologs #2725. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 S.scrofa:281

F7BP82              	100.00%		F1SIC2              	100.00%
F7A686              	14.89%		I3LU66              	90.37%
Bootstrap support for F7BP82 as seed ortholog is 100%.
Bootstrap support for F1SIC2 as seed ortholog is 100%.

Group of orthologs #2726. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 S.scrofa:281

F6WJ25              	100.00%		F1RM44              	100.00%
                    	       		F1S1B0              	34.78%
Bootstrap support for F6WJ25 as seed ortholog is 100%.
Bootstrap support for F1RM44 as seed ortholog is 100%.

Group of orthologs #2727. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 S.scrofa:281

H2XZM3              	100.00%		F1RP87              	100.00%
Bootstrap support for H2XZM3 as seed ortholog is 100%.
Bootstrap support for F1RP87 as seed ortholog is 100%.

Group of orthologs #2728. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.scrofa:281

H2XQ36              	100.00%		F1SID5              	100.00%
Bootstrap support for H2XQ36 as seed ortholog is 99%.
Bootstrap support for F1SID5 as seed ortholog is 100%.

Group of orthologs #2729. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 S.scrofa:281

F6ZTV7              	100.00%		I3L7C7              	100.00%
Bootstrap support for F6ZTV7 as seed ortholog is 100%.
Bootstrap support for I3L7C7 as seed ortholog is 100%.

Group of orthologs #2730. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 S.scrofa:281

F6S7J0              	100.00%		K7GLR2              	100.00%
Bootstrap support for F6S7J0 as seed ortholog is 100%.
Bootstrap support for K7GLR2 as seed ortholog is 100%.

Group of orthologs #2731. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:205

F6XIW9              	100.00%		I3LJA3              	100.00%
Bootstrap support for F6XIW9 as seed ortholog is 99%.
Bootstrap support for I3LJA3 as seed ortholog is 100%.

Group of orthologs #2732. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 S.scrofa:58

H2XRK7              	100.00%		F1SSA4              	100.00%
Bootstrap support for H2XRK7 as seed ortholog is 100%.
Bootstrap support for F1SSA4 as seed ortholog is 98%.

Group of orthologs #2733. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.scrofa:58

F7AK90              	100.00%		P80229              	100.00%
F7BHT5              	90.02%		F1SMX7              	16.85%
                    	       		F1SMW8              	15.33%
                    	       		F1SMW7              	12.96%
                    	       		F1SMW3              	7.78%
Bootstrap support for F7AK90 as seed ortholog is 68%.
Alternative seed ortholog is F6VTS4 (19 bits away from this cluster)
Bootstrap support for P80229 as seed ortholog is 94%.

Group of orthologs #2734. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:191

F6PTH0              	100.00%		F1S1B9              	100.00%
F6PTW3              	49.77%		
F6PUC9              	37.10%		
F6RPI4              	36.20%		
F6RPK0              	22.62%		
Bootstrap support for F6PTH0 as seed ortholog is 100%.
Bootstrap support for F1S1B9 as seed ortholog is 100%.

Group of orthologs #2735. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:72

F6Y5B7              	100.00%		F2Z5P3              	100.00%
                    	       		Q06AA9              	100.00%
                    	       		F1S1P0              	20.00%
Bootstrap support for F6Y5B7 as seed ortholog is 94%.
Bootstrap support for F2Z5P3 as seed ortholog is 100%.
Bootstrap support for Q06AA9 as seed ortholog is 100%.

Group of orthologs #2736. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.scrofa:53

F6QIM1              	100.00%		I3L7N8              	100.00%
                    	       		F2Z563              	35.09%
Bootstrap support for F6QIM1 as seed ortholog is 100%.
Bootstrap support for I3L7N8 as seed ortholog is 99%.

Group of orthologs #2737. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 S.scrofa:280

F6RRS1              	100.00%		I3LMA9              	100.00%
                    	       		I3LC79              	43.48%
Bootstrap support for F6RRS1 as seed ortholog is 100%.
Bootstrap support for I3LMA9 as seed ortholog is 100%.

Group of orthologs #2738. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 S.scrofa:280

F6RC10              	100.00%		F1S5P5              	100.00%
Bootstrap support for F6RC10 as seed ortholog is 100%.
Bootstrap support for F1S5P5 as seed ortholog is 100%.

Group of orthologs #2739. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 S.scrofa:280

F7ATI9              	100.00%		F1RQU7              	100.00%
Bootstrap support for F7ATI9 as seed ortholog is 100%.
Bootstrap support for F1RQU7 as seed ortholog is 100%.

Group of orthologs #2740. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 S.scrofa:280

F6V6F4              	100.00%		F1SG88              	100.00%
Bootstrap support for F6V6F4 as seed ortholog is 100%.
Bootstrap support for F1SG88 as seed ortholog is 100%.

Group of orthologs #2741. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 S.scrofa:280

F6WEC1              	100.00%		F1SEG4              	100.00%
Bootstrap support for F6WEC1 as seed ortholog is 100%.
Bootstrap support for F1SEG4 as seed ortholog is 100%.

Group of orthologs #2742. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 S.scrofa:27

H2XWW0              	100.00%		F1RJH3              	100.00%
Bootstrap support for H2XWW0 as seed ortholog is 100%.
Bootstrap support for F1RJH3 as seed ortholog is 83%.

Group of orthologs #2743. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 S.scrofa:145

H2XLK7              	100.00%		F2Z4Z5              	100.00%
Bootstrap support for H2XLK7 as seed ortholog is 100%.
Bootstrap support for F2Z4Z5 as seed ortholog is 100%.

Group of orthologs #2744. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 S.scrofa:280

F6UGC2              	100.00%		I3LUE3              	100.00%
Bootstrap support for F6UGC2 as seed ortholog is 100%.
Bootstrap support for I3LUE3 as seed ortholog is 100%.

Group of orthologs #2745. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.scrofa:25

F6ZX23              	100.00%		I3LVL1              	100.00%
Bootstrap support for F6ZX23 as seed ortholog is 100%.
Bootstrap support for I3LVL1 as seed ortholog is 94%.

Group of orthologs #2746. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:101

F6WJ31              	100.00%		F1RFR9              	100.00%
                    	       		F1SFH8              	27.22%
Bootstrap support for F6WJ31 as seed ortholog is 100%.
Bootstrap support for F1RFR9 as seed ortholog is 99%.

Group of orthologs #2747. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 S.scrofa:115

F6YYU4              	100.00%		F1RZX9              	100.00%
                    	       		I3LRP7              	70.94%
Bootstrap support for F6YYU4 as seed ortholog is 100%.
Bootstrap support for F1RZX9 as seed ortholog is 99%.

Group of orthologs #2748. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:105

F6ZUZ5              	100.00%		P25117              	100.00%
                    	       		Q8WN93              	29.43%
Bootstrap support for F6ZUZ5 as seed ortholog is 100%.
Bootstrap support for P25117 as seed ortholog is 99%.

Group of orthologs #2749. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 S.scrofa:279

F6ZSN0              	100.00%		F1RJI1              	100.00%
Bootstrap support for F6ZSN0 as seed ortholog is 100%.
Bootstrap support for F1RJI1 as seed ortholog is 100%.

Group of orthologs #2750. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 S.scrofa:279

F6UIW1              	100.00%		F1SGT2              	100.00%
Bootstrap support for F6UIW1 as seed ortholog is 100%.
Bootstrap support for F1SGT2 as seed ortholog is 100%.

Group of orthologs #2751. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 S.scrofa:279

F6Z6J2              	100.00%		F1S8H8              	100.00%
Bootstrap support for F6Z6J2 as seed ortholog is 100%.
Bootstrap support for F1S8H8 as seed ortholog is 100%.

Group of orthologs #2752. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 S.scrofa:279

F6TDS0              	100.00%		F1STR8              	100.00%
Bootstrap support for F6TDS0 as seed ortholog is 100%.
Bootstrap support for F1STR8 as seed ortholog is 100%.

Group of orthologs #2753. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 S.scrofa:171

F7ALU8              	100.00%		F1SA52              	100.00%
Bootstrap support for F7ALU8 as seed ortholog is 100%.
Bootstrap support for F1SA52 as seed ortholog is 99%.

Group of orthologs #2754. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 S.scrofa:172

C4B8X2              	100.00%		I3LN92              	100.00%
Bootstrap support for C4B8X2 as seed ortholog is 100%.
Bootstrap support for I3LN92 as seed ortholog is 100%.

Group of orthologs #2755. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 S.scrofa:279

H2XQK5              	100.00%		F1S2U6              	100.00%
Bootstrap support for H2XQK5 as seed ortholog is 100%.
Bootstrap support for F1S2U6 as seed ortholog is 100%.

Group of orthologs #2756. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 S.scrofa:279

F6WTU8              	100.00%		Q8MJ30              	100.00%
Bootstrap support for F6WTU8 as seed ortholog is 100%.
Bootstrap support for Q8MJ30 as seed ortholog is 100%.

Group of orthologs #2757. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.scrofa:95

H2XXH6              	100.00%		I3LQN1              	100.00%
Bootstrap support for H2XXH6 as seed ortholog is 100%.
Bootstrap support for I3LQN1 as seed ortholog is 99%.

Group of orthologs #2758. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:22

Q4VYB1              	100.00%		I3LK23              	100.00%
Bootstrap support for Q4VYB1 as seed ortholog is 98%.
Bootstrap support for I3LK23 as seed ortholog is 73%.
Alternative seed ortholog is F1S6C4 (22 bits away from this cluster)

Group of orthologs #2759. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 S.scrofa:91

H2Y1D7              	100.00%		Q0PIT9              	100.00%
Bootstrap support for H2Y1D7 as seed ortholog is 100%.
Bootstrap support for Q0PIT9 as seed ortholog is 99%.

Group of orthologs #2760. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.scrofa:99

H2XZJ2              	100.00%		F1SM78              	100.00%
                    	       		P29269              	100.00%
                    	       		I3LBF7              	73.97%
Bootstrap support for H2XZJ2 as seed ortholog is 100%.
Bootstrap support for F1SM78 as seed ortholog is 99%.
Bootstrap support for P29269 as seed ortholog is 99%.

Group of orthologs #2761. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 S.scrofa:278

F6QQM7              	100.00%		F1SH63              	100.00%
F6XH20              	7.49%		
Bootstrap support for F6QQM7 as seed ortholog is 100%.
Bootstrap support for F1SH63 as seed ortholog is 100%.

Group of orthologs #2762. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.scrofa:278

F6QX49              	100.00%		P09889              	100.00%
                    	       		F1SA30              	82.66%
Bootstrap support for F6QX49 as seed ortholog is 87%.
Bootstrap support for P09889 as seed ortholog is 100%.

Group of orthologs #2763. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 S.scrofa:278

F6ZIA7              	100.00%		I3L949              	100.00%
                    	       		F1SEJ0              	81.13%
Bootstrap support for F6ZIA7 as seed ortholog is 100%.
Bootstrap support for I3L949 as seed ortholog is 100%.

Group of orthologs #2764. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 S.scrofa:278

F6T0U6              	100.00%		A5A8Z8              	100.00%
Bootstrap support for F6T0U6 as seed ortholog is 100%.
Bootstrap support for A5A8Z8 as seed ortholog is 100%.

Group of orthologs #2765. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 S.scrofa:278

F6SR47              	100.00%		F1STK8              	100.00%
Bootstrap support for F6SR47 as seed ortholog is 100%.
Bootstrap support for F1STK8 as seed ortholog is 100%.

Group of orthologs #2766. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 S.scrofa:278

F6XBS5              	100.00%		F1SHU9              	100.00%
Bootstrap support for F6XBS5 as seed ortholog is 100%.
Bootstrap support for F1SHU9 as seed ortholog is 100%.

Group of orthologs #2767. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 S.scrofa:278

F6TST6              	100.00%		I3LGH2              	100.00%
Bootstrap support for F6TST6 as seed ortholog is 100%.
Bootstrap support for I3LGH2 as seed ortholog is 100%.

Group of orthologs #2768. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.scrofa:41

F7APE7              	100.00%		F1SN17              	100.00%
Bootstrap support for F7APE7 as seed ortholog is 95%.
Bootstrap support for F1SN17 as seed ortholog is 90%.

Group of orthologs #2769. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 S.scrofa:157

F6PPI4              	100.00%		Q45FY6              	100.00%
Bootstrap support for F6PPI4 as seed ortholog is 100%.
Bootstrap support for Q45FY6 as seed ortholog is 100%.

Group of orthologs #2770. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 S.scrofa:278

H2XPJ6              	100.00%		I3L7N6              	100.00%
Bootstrap support for H2XPJ6 as seed ortholog is 100%.
Bootstrap support for I3L7N6 as seed ortholog is 100%.

Group of orthologs #2771. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 S.scrofa:105

H2XR56              	100.00%		I3LLP0              	100.00%
Bootstrap support for H2XR56 as seed ortholog is 100%.
Bootstrap support for I3LLP0 as seed ortholog is 99%.

Group of orthologs #2772. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 S.scrofa:278

H2XNP3              	100.00%		I3LUQ2              	100.00%
Bootstrap support for H2XNP3 as seed ortholog is 100%.
Bootstrap support for I3LUQ2 as seed ortholog is 100%.

Group of orthologs #2773. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.scrofa:209

F7B4R7              	100.00%		F1SGQ0              	100.00%
H2XM06              	73.99%		
F6T7Z6              	54.34%		
Bootstrap support for F7B4R7 as seed ortholog is 100%.
Bootstrap support for F1SGQ0 as seed ortholog is 100%.

Group of orthologs #2774. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 S.scrofa:112

F6WB20              	100.00%		D3K5L0              	100.00%
Bootstrap support for F6WB20 as seed ortholog is 100%.
Bootstrap support for D3K5L0 as seed ortholog is 99%.

Group of orthologs #2775. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 S.scrofa:34

F6UPC7              	100.00%		F1RS60              	100.00%
Bootstrap support for F6UPC7 as seed ortholog is 100%.
Bootstrap support for F1RS60 as seed ortholog is 94%.

Group of orthologs #2776. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 S.scrofa:277

F6QLG8              	100.00%		F1SGP0              	100.00%
Bootstrap support for F6QLG8 as seed ortholog is 100%.
Bootstrap support for F1SGP0 as seed ortholog is 100%.

Group of orthologs #2777. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 S.scrofa:277

F6QVW6              	100.00%		F1SGM8              	100.00%
Bootstrap support for F6QVW6 as seed ortholog is 100%.
Bootstrap support for F1SGM8 as seed ortholog is 100%.

Group of orthologs #2778. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 S.scrofa:277

F6XR12              	100.00%		F1RX24              	100.00%
Bootstrap support for F6XR12 as seed ortholog is 100%.
Bootstrap support for F1RX24 as seed ortholog is 100%.

Group of orthologs #2779. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 S.scrofa:133

F6SZ23              	100.00%		I3LEB0              	100.00%
Bootstrap support for F6SZ23 as seed ortholog is 100%.
Bootstrap support for I3LEB0 as seed ortholog is 99%.

Group of orthologs #2780. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 S.scrofa:188

H2XPF4              	100.00%		F1SGB5              	100.00%
Bootstrap support for H2XPF4 as seed ortholog is 100%.
Bootstrap support for F1SGB5 as seed ortholog is 100%.

Group of orthologs #2781. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 S.scrofa:154

F6U1H7              	100.00%		F1RKM0              	100.00%
                    	       		I3LC25              	46.69%
                    	       		Q3ZD69              	40.43%
Bootstrap support for F6U1H7 as seed ortholog is 99%.
Bootstrap support for F1RKM0 as seed ortholog is 99%.

Group of orthologs #2782. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 S.scrofa:276

F6UA65              	100.00%		F1RNZ1              	100.00%
Bootstrap support for F6UA65 as seed ortholog is 100%.
Bootstrap support for F1RNZ1 as seed ortholog is 100%.

Group of orthologs #2783. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:276

F6T310              	100.00%		F1SI90              	100.00%
Bootstrap support for F6T310 as seed ortholog is 99%.
Bootstrap support for F1SI90 as seed ortholog is 100%.

Group of orthologs #2784. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 S.scrofa:276

F6UMT8              	100.00%		Q19QT7              	100.00%
Bootstrap support for F6UMT8 as seed ortholog is 100%.
Bootstrap support for Q19QT7 as seed ortholog is 100%.

Group of orthologs #2785. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.scrofa:145

F6YDS2              	100.00%		Q27I49              	100.00%
Bootstrap support for F6YDS2 as seed ortholog is 99%.
Bootstrap support for Q27I49 as seed ortholog is 100%.

Group of orthologs #2786. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.scrofa:275

F6ZMG2              	100.00%		F1RZK5              	100.00%
F6XNX3              	49.68%		
Bootstrap support for F6ZMG2 as seed ortholog is 100%.
Bootstrap support for F1RZK5 as seed ortholog is 100%.

Group of orthologs #2787. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.scrofa:275

H2XNN8              	100.00%		F1RKC8              	100.00%
                    	       		F1RKC9              	26.65%
Bootstrap support for H2XNN8 as seed ortholog is 100%.
Bootstrap support for F1RKC8 as seed ortholog is 100%.

Group of orthologs #2788. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.scrofa:171

H2XRU5              	100.00%		F1RU99              	100.00%
                    	       		F1SLT9              	48.78%
Bootstrap support for H2XRU5 as seed ortholog is 100%.
Bootstrap support for F1RU99 as seed ortholog is 100%.

Group of orthologs #2789. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.scrofa:186

F6XP52              	100.00%		Q02745              	100.00%
                    	       		I3LEP5              	13.93%
Bootstrap support for F6XP52 as seed ortholog is 100%.
Bootstrap support for Q02745 as seed ortholog is 100%.

Group of orthologs #2790. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.scrofa:275

F6UFA9              	100.00%		F1RPJ7              	100.00%
Bootstrap support for F6UFA9 as seed ortholog is 100%.
Bootstrap support for F1RPJ7 as seed ortholog is 100%.

Group of orthologs #2791. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.scrofa:223

F6Y1W8              	100.00%		F1RU00              	100.00%
Bootstrap support for F6Y1W8 as seed ortholog is 100%.
Bootstrap support for F1RU00 as seed ortholog is 100%.

Group of orthologs #2792. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.scrofa:275

F6V8G3              	100.00%		F1S4S3              	100.00%
Bootstrap support for F6V8G3 as seed ortholog is 100%.
Bootstrap support for F1S4S3 as seed ortholog is 100%.

Group of orthologs #2793. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.scrofa:45

F6YLC1              	100.00%		F1RZU5              	100.00%
Bootstrap support for F6YLC1 as seed ortholog is 100%.
Bootstrap support for F1RZU5 as seed ortholog is 99%.

Group of orthologs #2794. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.scrofa:6

F7BKD9              	100.00%		F1S085              	100.00%
Bootstrap support for F7BKD9 as seed ortholog is 100%.
Bootstrap support for F1S085 as seed ortholog is 57%.
Alternative seed ortholog is F1S0C0 (6 bits away from this cluster)

Group of orthologs #2795. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.scrofa:275

F6U095              	100.00%		I3LLY5              	100.00%
Bootstrap support for F6U095 as seed ortholog is 100%.
Bootstrap support for I3LLY5 as seed ortholog is 100%.

Group of orthologs #2796. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 S.scrofa:115

F6S8K9              	100.00%		Q8WNW2              	100.00%
Bootstrap support for F6S8K9 as seed ortholog is 100%.
Bootstrap support for Q8WNW2 as seed ortholog is 99%.

Group of orthologs #2797. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.scrofa:275

H2XSU1              	100.00%		I3LQ51              	100.00%
Bootstrap support for H2XSU1 as seed ortholog is 100%.
Bootstrap support for I3LQ51 as seed ortholog is 100%.

Group of orthologs #2798. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 S.scrofa:274

F7B4V3              	100.00%		F1S0B9              	100.00%
                    	       		F1S3A3              	12.30%
Bootstrap support for F7B4V3 as seed ortholog is 100%.
Bootstrap support for F1S0B9 as seed ortholog is 100%.

Group of orthologs #2799. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 S.scrofa:274

H2XNS7              	100.00%		F1S261              	100.00%
                    	       		F1RL04              	7.75%
Bootstrap support for H2XNS7 as seed ortholog is 100%.
Bootstrap support for F1S261 as seed ortholog is 100%.

Group of orthologs #2800. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 S.scrofa:56

F6U922              	100.00%		F1RLG2              	100.00%
Bootstrap support for F6U922 as seed ortholog is 49%.
Alternative seed ortholog is F6PKF9 (2 bits away from this cluster)
Bootstrap support for F1RLG2 as seed ortholog is 84%.

Group of orthologs #2801. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 S.scrofa:274

F6TCH6              	100.00%		F1RSA4              	100.00%
Bootstrap support for F6TCH6 as seed ortholog is 100%.
Bootstrap support for F1RSA4 as seed ortholog is 100%.

Group of orthologs #2802. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 S.scrofa:274

F6R815              	100.00%		F1S7R8              	100.00%
Bootstrap support for F6R815 as seed ortholog is 100%.
Bootstrap support for F1S7R8 as seed ortholog is 100%.

Group of orthologs #2803. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 S.scrofa:274

F6XVG4              	100.00%		F1RSH0              	100.00%
Bootstrap support for F6XVG4 as seed ortholog is 100%.
Bootstrap support for F1RSH0 as seed ortholog is 100%.

Group of orthologs #2804. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:152

F6SW20              	100.00%		F1SRV6              	100.00%
Bootstrap support for F6SW20 as seed ortholog is 94%.
Bootstrap support for F1SRV6 as seed ortholog is 99%.

Group of orthologs #2805. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 S.scrofa:274

F7AJZ2              	100.00%		F1S8E6              	100.00%
Bootstrap support for F7AJZ2 as seed ortholog is 100%.
Bootstrap support for F1S8E6 as seed ortholog is 100%.

Group of orthologs #2806. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 S.scrofa:212

F6WUF6              	100.00%		F1STE6              	100.00%
Bootstrap support for F6WUF6 as seed ortholog is 100%.
Bootstrap support for F1STE6 as seed ortholog is 100%.

Group of orthologs #2807. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 S.scrofa:190

H2XL75              	100.00%		F1SAH3              	100.00%
Bootstrap support for H2XL75 as seed ortholog is 99%.
Bootstrap support for F1SAH3 as seed ortholog is 100%.

Group of orthologs #2808. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.scrofa:274

F6XNK4              	100.00%		I3L754              	100.00%
Bootstrap support for F6XNK4 as seed ortholog is 100%.
Bootstrap support for I3L754 as seed ortholog is 100%.

Group of orthologs #2809. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 S.scrofa:78

H2XLI1              	100.00%		F1S0Y7              	100.00%
                    	       		A7YX22              	47.32%
Bootstrap support for H2XLI1 as seed ortholog is 100%.
Bootstrap support for F1S0Y7 as seed ortholog is 98%.

Group of orthologs #2810. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.scrofa:78

F6S1J5              	100.00%		I3LQY5              	100.00%
                    	       		F1SKV8              	7.29%
Bootstrap support for F6S1J5 as seed ortholog is 98%.
Bootstrap support for I3LQY5 as seed ortholog is 98%.

Group of orthologs #2811. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 S.scrofa:273

F6RYR1              	100.00%		F1S7A8              	100.00%
Bootstrap support for F6RYR1 as seed ortholog is 100%.
Bootstrap support for F1S7A8 as seed ortholog is 100%.

Group of orthologs #2812. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 S.scrofa:224

H2XTN0              	100.00%		F1RSH4              	100.00%
Bootstrap support for H2XTN0 as seed ortholog is 100%.
Bootstrap support for F1RSH4 as seed ortholog is 100%.

Group of orthologs #2813. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 S.scrofa:273

F6WSD2              	100.00%		F1SQR1              	100.00%
Bootstrap support for F6WSD2 as seed ortholog is 100%.
Bootstrap support for F1SQR1 as seed ortholog is 100%.

Group of orthologs #2814. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 S.scrofa:273

H2XRE3              	100.00%		I3L5C1              	100.00%
Bootstrap support for H2XRE3 as seed ortholog is 100%.
Bootstrap support for I3L5C1 as seed ortholog is 100%.

Group of orthologs #2815. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:272

F6PXM4              	100.00%		F1S2P8              	100.00%
                    	       		F1S2X7              	21.79%
Bootstrap support for F6PXM4 as seed ortholog is 100%.
Bootstrap support for F1S2P8 as seed ortholog is 100%.

Group of orthologs #2816. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:272

F6WJQ0              	100.00%		Q29195              	100.00%
                    	       		F1SI10              	90.96%
Bootstrap support for F6WJQ0 as seed ortholog is 100%.
Bootstrap support for Q29195 as seed ortholog is 100%.

Group of orthologs #2817. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:272

P61802              	100.00%		Q7YRZ1              	100.00%
F6TMD1              	97.40%		
Bootstrap support for P61802 as seed ortholog is 100%.
Bootstrap support for Q7YRZ1 as seed ortholog is 100%.

Group of orthologs #2818. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:272

F6VA08              	100.00%		F1S197              	100.00%
Bootstrap support for F6VA08 as seed ortholog is 100%.
Bootstrap support for F1S197 as seed ortholog is 100%.

Group of orthologs #2819. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:188

F6TR45              	100.00%		F1SHZ4              	100.00%
Bootstrap support for F6TR45 as seed ortholog is 100%.
Bootstrap support for F1SHZ4 as seed ortholog is 99%.

Group of orthologs #2820. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:272

F7BBQ0              	100.00%		F1SBT2              	100.00%
Bootstrap support for F7BBQ0 as seed ortholog is 100%.
Bootstrap support for F1SBT2 as seed ortholog is 100%.

Group of orthologs #2821. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.scrofa:76

F6R0U8              	100.00%		Q06AU5              	100.00%
Bootstrap support for F6R0U8 as seed ortholog is 100%.
Bootstrap support for Q06AU5 as seed ortholog is 99%.

Group of orthologs #2822. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:272

H2Y1H7              	100.00%		F1SQA3              	100.00%
Bootstrap support for H2Y1H7 as seed ortholog is 100%.
Bootstrap support for F1SQA3 as seed ortholog is 100%.

Group of orthologs #2823. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:272

H2XS95              	100.00%		I3LD53              	100.00%
Bootstrap support for H2XS95 as seed ortholog is 100%.
Bootstrap support for I3LD53 as seed ortholog is 100%.

Group of orthologs #2824. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:199

F6YFV6              	100.00%		Q6PWT7              	100.00%
Bootstrap support for F6YFV6 as seed ortholog is 100%.
Bootstrap support for Q6PWT7 as seed ortholog is 100%.

Group of orthologs #2825. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:272

Q0E670              	100.00%		F1SR10              	100.00%
Bootstrap support for Q0E670 as seed ortholog is 100%.
Bootstrap support for F1SR10 as seed ortholog is 100%.

Group of orthologs #2826. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 S.scrofa:272

H2Y0C0              	100.00%		I3LKG7              	100.00%
Bootstrap support for H2Y0C0 as seed ortholog is 100%.
Bootstrap support for I3LKG7 as seed ortholog is 100%.

Group of orthologs #2827. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 S.scrofa:133

H2XUW3              	100.00%		F1S408              	100.00%
                    	       		F1SS16              	21.91%
Bootstrap support for H2XUW3 as seed ortholog is 100%.
Bootstrap support for F1S408 as seed ortholog is 99%.

Group of orthologs #2828. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:271

F7AAN8              	100.00%		Q29073              	100.00%
H2XYH1              	54.25%		
Bootstrap support for F7AAN8 as seed ortholog is 100%.
Bootstrap support for Q29073 as seed ortholog is 100%.

Group of orthologs #2829. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 S.scrofa:271

F6ZBF1              	100.00%		F1RIU1              	100.00%
Bootstrap support for F6ZBF1 as seed ortholog is 100%.
Bootstrap support for F1RIU1 as seed ortholog is 100%.

Group of orthologs #2830. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 S.scrofa:271

F6QDJ6              	100.00%		F1SJ20              	100.00%
Bootstrap support for F6QDJ6 as seed ortholog is 100%.
Bootstrap support for F1SJ20 as seed ortholog is 100%.

Group of orthologs #2831. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.scrofa:73

H2XU01              	100.00%		B6E241              	100.00%
Bootstrap support for H2XU01 as seed ortholog is 99%.
Bootstrap support for B6E241 as seed ortholog is 99%.

Group of orthologs #2832. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.scrofa:76

F6TMG7              	100.00%		F2Z5V9              	100.00%
Bootstrap support for F6TMG7 as seed ortholog is 99%.
Bootstrap support for F2Z5V9 as seed ortholog is 99%.

Group of orthologs #2833. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 S.scrofa:271

F7A9W3              	100.00%		F1SI80              	100.00%
Bootstrap support for F7A9W3 as seed ortholog is 100%.
Bootstrap support for F1SI80 as seed ortholog is 100%.

Group of orthologs #2834. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 S.scrofa:271

F6PSK8              	100.00%		P0C5I2              	100.00%
Bootstrap support for F6PSK8 as seed ortholog is 100%.
Bootstrap support for P0C5I2 as seed ortholog is 100%.

Group of orthologs #2835. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 S.scrofa:271

H2XYV9              	100.00%		F1SB37              	100.00%
Bootstrap support for H2XYV9 as seed ortholog is 100%.
Bootstrap support for F1SB37 as seed ortholog is 100%.

Group of orthologs #2836. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 S.scrofa:271

F7BKG7              	100.00%		I3LQQ1              	100.00%
Bootstrap support for F7BKG7 as seed ortholog is 100%.
Bootstrap support for I3LQQ1 as seed ortholog is 100%.

Group of orthologs #2837. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 S.scrofa:38

H2XWD3              	100.00%		I3LP27              	100.00%
Bootstrap support for H2XWD3 as seed ortholog is 100%.
Bootstrap support for I3LP27 as seed ortholog is 90%.

Group of orthologs #2838. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 S.scrofa:271

H2XTJ5              	100.00%		Q9MZS9              	100.00%
Bootstrap support for H2XTJ5 as seed ortholog is 100%.
Bootstrap support for Q9MZS9 as seed ortholog is 100%.

Group of orthologs #2839. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:93

F6VIZ2              	100.00%		F1RNZ8              	100.00%
                    	       		A4UTP7              	98.80%
                    	       		A2ICN5              	41.98%
                    	       		F1SRX6              	27.74%
                    	       		F1RP31              	24.74%
Bootstrap support for F6VIZ2 as seed ortholog is 100%.
Bootstrap support for F1RNZ8 as seed ortholog is 99%.

Group of orthologs #2840. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:109

F7ATJ8              	100.00%		F1RS00              	100.00%
                    	       		F1RX60              	41.04%
                    	       		F1S5M6              	5.83%
Bootstrap support for F7ATJ8 as seed ortholog is 100%.
Bootstrap support for F1RS00 as seed ortholog is 99%.

Group of orthologs #2841. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:270

F6RDT5              	100.00%		F1RYU7              	100.00%
H2XVT8              	38.08%		
Bootstrap support for F6RDT5 as seed ortholog is 100%.
Bootstrap support for F1RYU7 as seed ortholog is 100%.

Group of orthologs #2842. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:151

F6TAL4              	100.00%		F1SKT2              	100.00%
                    	       		F1S5G7              	36.09%
Bootstrap support for F6TAL4 as seed ortholog is 100%.
Bootstrap support for F1SKT2 as seed ortholog is 100%.

Group of orthologs #2843. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:270

F6UE24              	100.00%		F1SQ44              	100.00%
                    	       		F1S766              	82.86%
Bootstrap support for F6UE24 as seed ortholog is 100%.
Bootstrap support for F1SQ44 as seed ortholog is 100%.

Group of orthologs #2844. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:270

H2XYP3              	100.00%		F1RGD0              	100.00%
                    	       		F1SPQ2              	25.94%
Bootstrap support for H2XYP3 as seed ortholog is 100%.
Bootstrap support for F1RGD0 as seed ortholog is 100%.

Group of orthologs #2845. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:96

F6S5L9              	100.00%		I3LNL7              	100.00%
                    	       		F1RV86              	16.10%
Bootstrap support for F6S5L9 as seed ortholog is 100%.
Bootstrap support for I3LNL7 as seed ortholog is 93%.

Group of orthologs #2846. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:270

F6WYT3              	100.00%		I3LN95              	100.00%
H2XRA0              	15.19%		
Bootstrap support for F6WYT3 as seed ortholog is 100%.
Bootstrap support for I3LN95 as seed ortholog is 100%.

Group of orthologs #2847. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:140

F6QW33              	100.00%		I3LCD2              	100.00%
Bootstrap support for F6QW33 as seed ortholog is 100%.
Bootstrap support for I3LCD2 as seed ortholog is 99%.

Group of orthologs #2848. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:201

F6XJX5              	100.00%		F1SR81              	100.00%
Bootstrap support for F6XJX5 as seed ortholog is 100%.
Bootstrap support for F1SR81 as seed ortholog is 100%.

Group of orthologs #2849. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:270

Q1RLC3              	100.00%		F1RSP2              	100.00%
Bootstrap support for Q1RLC3 as seed ortholog is 100%.
Bootstrap support for F1RSP2 as seed ortholog is 100%.

Group of orthologs #2850. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:270

F7A7A0              	100.00%		F1ST73              	100.00%
Bootstrap support for F7A7A0 as seed ortholog is 100%.
Bootstrap support for F1ST73 as seed ortholog is 100%.

Group of orthologs #2851. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:270

F6UUL4              	100.00%		I3LJC8              	100.00%
Bootstrap support for F6UUL4 as seed ortholog is 100%.
Bootstrap support for I3LJC8 as seed ortholog is 100%.

Group of orthologs #2852. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 S.scrofa:191

F6VLD0              	100.00%		I3LN62              	100.00%
Bootstrap support for F6VLD0 as seed ortholog is 100%.
Bootstrap support for I3LN62 as seed ortholog is 100%.

Group of orthologs #2853. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 S.scrofa:269

F7A726              	100.00%		B8XTR3              	100.00%
H2XV91              	9.25%		
Bootstrap support for F7A726 as seed ortholog is 100%.
Bootstrap support for B8XTR3 as seed ortholog is 100%.

Group of orthologs #2854. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 S.scrofa:269

H2XJH4              	100.00%		I3L5S3              	100.00%
                    	       		F1RUR3              	39.48%
Bootstrap support for H2XJH4 as seed ortholog is 100%.
Bootstrap support for I3L5S3 as seed ortholog is 100%.

Group of orthologs #2855. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 S.scrofa:269

F6VKC0              	100.00%		C5HGF3              	100.00%
Bootstrap support for F6VKC0 as seed ortholog is 100%.
Bootstrap support for C5HGF3 as seed ortholog is 100%.

Group of orthologs #2856. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.scrofa:10

F7B5N7              	100.00%		F1S7J1              	100.00%
Bootstrap support for F7B5N7 as seed ortholog is 100%.
Bootstrap support for F1S7J1 as seed ortholog is 54%.
Alternative seed ortholog is I3LNA0 (10 bits away from this cluster)

Group of orthologs #2857. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 S.scrofa:269

F6RG39              	100.00%		I3LMG8              	100.00%
Bootstrap support for F6RG39 as seed ortholog is 100%.
Bootstrap support for I3LMG8 as seed ortholog is 100%.

Group of orthologs #2858. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 S.scrofa:269

F7B9W5              	100.00%		F1SND9              	100.00%
Bootstrap support for F7B9W5 as seed ortholog is 100%.
Bootstrap support for F1SND9 as seed ortholog is 100%.

Group of orthologs #2859. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 S.scrofa:269

F6TRZ2              	100.00%		I3LSD3              	100.00%
Bootstrap support for F6TRZ2 as seed ortholog is 100%.
Bootstrap support for I3LSD3 as seed ortholog is 100%.

Group of orthologs #2860. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 S.scrofa:269

H2XL84              	100.00%		I3LGD1              	100.00%
Bootstrap support for H2XL84 as seed ortholog is 100%.
Bootstrap support for I3LGD1 as seed ortholog is 100%.

Group of orthologs #2861. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 S.scrofa:269

H2XSK2              	100.00%		I3LFC4              	100.00%
Bootstrap support for H2XSK2 as seed ortholog is 100%.
Bootstrap support for I3LFC4 as seed ortholog is 100%.

Group of orthologs #2862. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 S.scrofa:268

F6W2K0              	100.00%		F1S4G5              	100.00%
                    	       		I3L5Q8              	100.00%
Bootstrap support for F6W2K0 as seed ortholog is 100%.
Bootstrap support for F1S4G5 as seed ortholog is 100%.
Bootstrap support for I3L5Q8 as seed ortholog is 100%.

Group of orthologs #2863. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 S.scrofa:203

F6VUS5              	100.00%		F1S213              	100.00%
Bootstrap support for F6VUS5 as seed ortholog is 100%.
Bootstrap support for F1S213 as seed ortholog is 100%.

Group of orthologs #2864. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 S.scrofa:268

F7AEP2              	100.00%		F1SV45              	100.00%
Bootstrap support for F7AEP2 as seed ortholog is 100%.
Bootstrap support for F1SV45 as seed ortholog is 100%.

Group of orthologs #2865. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 S.scrofa:268

F7AND3              	100.00%		I3LQI5              	100.00%
Bootstrap support for F7AND3 as seed ortholog is 100%.
Bootstrap support for I3LQI5 as seed ortholog is 100%.

Group of orthologs #2866. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 S.scrofa:267

F6SPV5              	100.00%		F1RUH4              	100.00%
                    	       		F1S9L4              	15.46%
Bootstrap support for F6SPV5 as seed ortholog is 100%.
Bootstrap support for F1RUH4 as seed ortholog is 100%.

Group of orthologs #2867. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 S.scrofa:267

F6UK82              	100.00%		F1SKY6              	100.00%
                    	       		F1RHU6              	62.60%
Bootstrap support for F6UK82 as seed ortholog is 83%.
Bootstrap support for F1SKY6 as seed ortholog is 100%.

Group of orthologs #2868. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 S.scrofa:267

Q4H2Z5              	100.00%		F1SHK5              	100.00%
                    	       		F1SAU2              	27.13%
Bootstrap support for Q4H2Z5 as seed ortholog is 100%.
Bootstrap support for F1SHK5 as seed ortholog is 100%.

Group of orthologs #2869. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 S.scrofa:175

H2XQH7              	100.00%		Q06AA6              	100.00%
                    	       		I3LBN9              	25.16%
Bootstrap support for H2XQH7 as seed ortholog is 100%.
Bootstrap support for Q06AA6 as seed ortholog is 100%.

Group of orthologs #2870. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 S.scrofa:267

F6SFB8              	100.00%		F1RWM3              	100.00%
Bootstrap support for F6SFB8 as seed ortholog is 100%.
Bootstrap support for F1RWM3 as seed ortholog is 100%.

Group of orthologs #2871. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 S.scrofa:267

F7ACY4              	100.00%		F1RQE0              	100.00%
Bootstrap support for F7ACY4 as seed ortholog is 100%.
Bootstrap support for F1RQE0 as seed ortholog is 100%.

Group of orthologs #2872. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 S.scrofa:267

F6ZW37              	100.00%		F1RT67              	100.00%
Bootstrap support for F6ZW37 as seed ortholog is 100%.
Bootstrap support for F1RT67 as seed ortholog is 100%.

Group of orthologs #2873. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 S.scrofa:267

F7B480              	100.00%		F1SBM2              	100.00%
Bootstrap support for F7B480 as seed ortholog is 100%.
Bootstrap support for F1SBM2 as seed ortholog is 100%.

Group of orthologs #2874. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 S.scrofa:173

H2XWC1              	100.00%		F1S2Q3              	100.00%
Bootstrap support for H2XWC1 as seed ortholog is 100%.
Bootstrap support for F1S2Q3 as seed ortholog is 100%.

Group of orthologs #2875. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 S.scrofa:267

F7ASI0              	100.00%		I3L902              	100.00%
Bootstrap support for F7ASI0 as seed ortholog is 100%.
Bootstrap support for I3L902 as seed ortholog is 100%.

Group of orthologs #2876. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 S.scrofa:266

F6T3G6              	100.00%		F1RPC8              	100.00%
F6WG12              	18.54%		
Bootstrap support for F6T3G6 as seed ortholog is 100%.
Bootstrap support for F1RPC8 as seed ortholog is 100%.

Group of orthologs #2877. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:75

F6TEQ0              	100.00%		I3LAJ6              	100.00%
                    	       		I3LV17              	48.23%
Bootstrap support for F6TEQ0 as seed ortholog is 99%.
Bootstrap support for I3LAJ6 as seed ortholog is 100%.

Group of orthologs #2878. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 S.scrofa:266

F7BHV9              	100.00%		I3LS88              	100.00%
                    	       		I3LPF7              	7.04%
Bootstrap support for F7BHV9 as seed ortholog is 100%.
Bootstrap support for I3LS88 as seed ortholog is 100%.

Group of orthologs #2879. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:21

H2XZR6              	100.00%		I3LK86              	100.00%
P91580              	100.00%		
Bootstrap support for H2XZR6 as seed ortholog is 100%.
Bootstrap support for P91580 as seed ortholog is 100%.
Bootstrap support for I3LK86 as seed ortholog is 80%.

Group of orthologs #2880. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 S.scrofa:266

F6R407              	100.00%		F1RGP1              	100.00%
Bootstrap support for F6R407 as seed ortholog is 100%.
Bootstrap support for F1RGP1 as seed ortholog is 100%.

Group of orthologs #2881. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 S.scrofa:266

F7BGY7              	100.00%		F1SS71              	100.00%
Bootstrap support for F7BGY7 as seed ortholog is 100%.
Bootstrap support for F1SS71 as seed ortholog is 100%.

Group of orthologs #2882. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 S.scrofa:111

F6Y321              	100.00%		F1RJM9              	100.00%
                    	       		F1RGA3              	61.72%
                    	       		F1RFQ6              	31.38%
                    	       		F1RI88              	25.52%
Bootstrap support for F6Y321 as seed ortholog is 100%.
Bootstrap support for F1RJM9 as seed ortholog is 99%.

Group of orthologs #2883. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 S.scrofa:265

H2Y1F2              	100.00%		F1SA76              	100.00%
                    	       		F1RNT6              	21.17%
                    	       		I3LS06              	16.43%
                    	       		F1SDF6              	5.85%
Bootstrap support for H2Y1F2 as seed ortholog is 100%.
Bootstrap support for F1SA76 as seed ortholog is 100%.

Group of orthologs #2884. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 S.scrofa:65

F7BIC8              	100.00%		I3L5W9              	100.00%
                    	       		I3L884              	49.39%
                    	       		F1SHA9              	8.20%
Bootstrap support for F7BIC8 as seed ortholog is 100%.
Bootstrap support for I3L5W9 as seed ortholog is 97%.

Group of orthologs #2885. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 S.scrofa:265

F6PHJ3              	100.00%		F1SE00              	100.00%
                    	       		F1SQI6              	9.55%
Bootstrap support for F6PHJ3 as seed ortholog is 100%.
Bootstrap support for F1SE00 as seed ortholog is 100%.

Group of orthologs #2886. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.scrofa:154

F7AGZ7              	100.00%		F1SRY5              	100.00%
                    	       		F1RTE2              	21.48%
Bootstrap support for F7AGZ7 as seed ortholog is 100%.
Bootstrap support for F1SRY5 as seed ortholog is 99%.

Group of orthologs #2887. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 S.scrofa:265

F6WKL0              	100.00%		I3LSR2              	100.00%
                    	       		A5GHK8              	27.77%
Bootstrap support for F6WKL0 as seed ortholog is 100%.
Bootstrap support for I3LSR2 as seed ortholog is 100%.

Group of orthologs #2888. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 S.scrofa:102

F6VYL7              	100.00%		F1RUF5              	100.00%
Bootstrap support for F6VYL7 as seed ortholog is 100%.
Bootstrap support for F1RUF5 as seed ortholog is 99%.

Group of orthologs #2889. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 S.scrofa:265

F7AWV5              	100.00%		F1SAB5              	100.00%
Bootstrap support for F7AWV5 as seed ortholog is 100%.
Bootstrap support for F1SAB5 as seed ortholog is 100%.

Group of orthologs #2890. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.scrofa:164

F6XWG9              	100.00%		I3LJ21              	100.00%
Bootstrap support for F6XWG9 as seed ortholog is 100%.
Bootstrap support for I3LJ21 as seed ortholog is 100%.

Group of orthologs #2891. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 S.scrofa:265

H2XQ41              	100.00%		F1SRK8              	100.00%
Bootstrap support for H2XQ41 as seed ortholog is 100%.
Bootstrap support for F1SRK8 as seed ortholog is 100%.

Group of orthologs #2892. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 S.scrofa:265

F6WYC4              	100.00%		Q767K9              	100.00%
Bootstrap support for F6WYC4 as seed ortholog is 100%.
Bootstrap support for Q767K9 as seed ortholog is 100%.

Group of orthologs #2893. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 S.scrofa:6

H2XK16              	100.00%		Q71LE2              	100.00%
Bootstrap support for H2XK16 as seed ortholog is 63%.
Alternative seed ortholog is F7AHT0 (2 bits away from this cluster)
Bootstrap support for Q71LE2 as seed ortholog is 79%.

Group of orthologs #2894. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 S.scrofa:140

F6ZD62              	100.00%		F1SSQ7              	100.00%
                    	       		I3L604              	33.74%
                    	       		F1RX95              	26.75%
                    	       		I3L8R6              	20.83%
Bootstrap support for F6ZD62 as seed ortholog is 99%.
Bootstrap support for F1SSQ7 as seed ortholog is 99%.

Group of orthologs #2895. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.scrofa:123

F7B1Y1              	100.00%		F2Z512              	100.00%
Q8I7D5              	75.86%		Q6SA96              	92.86%
Bootstrap support for F7B1Y1 as seed ortholog is 100%.
Bootstrap support for F2Z512 as seed ortholog is 100%.

Group of orthologs #2896. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.scrofa:264

Q4H3H4              	100.00%		F1RI57              	100.00%
                    	       		I3LAN4              	9.25%
Bootstrap support for Q4H3H4 as seed ortholog is 96%.
Bootstrap support for F1RI57 as seed ortholog is 100%.

Group of orthologs #2897. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.scrofa:264

F7B3P4              	100.00%		F1SP32              	100.00%
                    	       		F1SD96              	26.74%
Bootstrap support for F7B3P4 as seed ortholog is 100%.
Bootstrap support for F1SP32 as seed ortholog is 100%.

Group of orthologs #2898. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.scrofa:264

H2XUY9              	100.00%		F1SRW6              	100.00%
                    	       		F1SJ10              	33.45%
Bootstrap support for H2XUY9 as seed ortholog is 100%.
Bootstrap support for F1SRW6 as seed ortholog is 100%.

Group of orthologs #2899. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 S.scrofa:195

F6T4J3              	100.00%		F1RJR9              	100.00%
Bootstrap support for F6T4J3 as seed ortholog is 100%.
Bootstrap support for F1RJR9 as seed ortholog is 100%.

Group of orthologs #2900. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:264

F6TKH9              	100.00%		F1RSL0              	100.00%
Bootstrap support for F6TKH9 as seed ortholog is 100%.
Bootstrap support for F1RSL0 as seed ortholog is 100%.

Group of orthologs #2901. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.scrofa:264

F6Q548              	100.00%		F1SNB7              	100.00%
Bootstrap support for F6Q548 as seed ortholog is 100%.
Bootstrap support for F1SNB7 as seed ortholog is 100%.

Group of orthologs #2902. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.scrofa:219

F6ZIP1              	100.00%		F1RYJ7              	100.00%
Bootstrap support for F6ZIP1 as seed ortholog is 100%.
Bootstrap support for F1RYJ7 as seed ortholog is 100%.

Group of orthologs #2903. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.scrofa:264

F7BHW5              	100.00%		F1RX65              	100.00%
Bootstrap support for F7BHW5 as seed ortholog is 100%.
Bootstrap support for F1RX65 as seed ortholog is 100%.

Group of orthologs #2904. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.scrofa:264

F7BPM3              	100.00%		F1S399              	100.00%
Bootstrap support for F7BPM3 as seed ortholog is 100%.
Bootstrap support for F1S399 as seed ortholog is 100%.

Group of orthologs #2905. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.scrofa:264

F7A4P8              	100.00%		F1SN51              	100.00%
Bootstrap support for F7A4P8 as seed ortholog is 100%.
Bootstrap support for F1SN51 as seed ortholog is 100%.

Group of orthologs #2906. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 S.scrofa:141

H2XPL6              	100.00%		F1SHK6              	100.00%
Bootstrap support for H2XPL6 as seed ortholog is 100%.
Bootstrap support for F1SHK6 as seed ortholog is 100%.

Group of orthologs #2907. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.scrofa:264

F6PP92              	100.00%		Q66RM2              	100.00%
Bootstrap support for F6PP92 as seed ortholog is 100%.
Bootstrap support for Q66RM2 as seed ortholog is 100%.

Group of orthologs #2908. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:167

F6X9K2              	100.00%		I3LM50              	100.00%
Bootstrap support for F6X9K2 as seed ortholog is 100%.
Bootstrap support for I3LM50 as seed ortholog is 100%.

Group of orthologs #2909. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 S.scrofa:264

H2XVU3              	100.00%		F2Z5Q4              	100.00%
Bootstrap support for H2XVU3 as seed ortholog is 100%.
Bootstrap support for F2Z5Q4 as seed ortholog is 100%.

Group of orthologs #2910. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.scrofa:152

H2XNN6              	100.00%		Q06AU4              	100.00%
                    	       		I3LPH3              	33.07%
                    	       		F1RLS6              	6.61%
Bootstrap support for H2XNN6 as seed ortholog is 100%.
Bootstrap support for Q06AU4 as seed ortholog is 100%.

Group of orthologs #2911. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 S.scrofa:73

F6RYU3              	100.00%		I3L8N1              	100.00%
                    	       		F1SQX8              	46.30%
Bootstrap support for F6RYU3 as seed ortholog is 99%.
Bootstrap support for I3L8N1 as seed ortholog is 99%.

Group of orthologs #2912. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 S.scrofa:107

F6U5L2              	100.00%		I3LG86              	100.00%
                    	       		F1RFY0              	13.47%
Bootstrap support for F6U5L2 as seed ortholog is 100%.
Bootstrap support for I3LG86 as seed ortholog is 99%.

Group of orthologs #2913. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 S.scrofa:60

H2Y2K9              	100.00%		F1S2J1              	100.00%
                    	       		F1RUD6              	16.81%
Bootstrap support for H2Y2K9 as seed ortholog is 100%.
Bootstrap support for F1S2J1 as seed ortholog is 88%.

Group of orthologs #2914. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.scrofa:163

F6RGE7              	100.00%		Q5PYH3              	100.00%
                    	       		Q52NJ3              	79.14%
Bootstrap support for F6RGE7 as seed ortholog is 100%.
Bootstrap support for Q5PYH3 as seed ortholog is 100%.

Group of orthologs #2915. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 S.scrofa:263

F6YX11              	100.00%		F1SFL6              	100.00%
Bootstrap support for F6YX11 as seed ortholog is 100%.
Bootstrap support for F1SFL6 as seed ortholog is 100%.

Group of orthologs #2916. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:9

F6RQT3              	100.00%		K7GPW1              	100.00%
Bootstrap support for F6RQT3 as seed ortholog is 98%.
Bootstrap support for K7GPW1 as seed ortholog is 50%.
Alternative seed ortholog is F1S153 (9 bits away from this cluster)

Group of orthologs #2917. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 S.scrofa:209

F6SVN8              	100.00%		P80895              	100.00%
Bootstrap support for F6SVN8 as seed ortholog is 100%.
Bootstrap support for P80895 as seed ortholog is 100%.

Group of orthologs #2918. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 S.scrofa:263

Q8HIN3              	100.00%		Q35916              	100.00%
Bootstrap support for Q8HIN3 as seed ortholog is 100%.
Bootstrap support for Q35916 as seed ortholog is 100%.

Group of orthologs #2919. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.scrofa:59

F7BLL2              	100.00%		Q28997              	100.00%
                    	       		Q28998              	21.20%
                    	       		Q95252              	12.02%
Bootstrap support for F7BLL2 as seed ortholog is 99%.
Bootstrap support for Q28997 as seed ortholog is 95%.

Group of orthologs #2920. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.scrofa:262

H2XR17              	100.00%		I3LR53              	100.00%
                    	       		F1S3S1              	61.40%
                    	       		I3LG57              	24.42%
Bootstrap support for H2XR17 as seed ortholog is 96%.
Bootstrap support for I3LR53 as seed ortholog is 100%.

Group of orthologs #2921. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:12

F6TFY3              	100.00%		F1S0A2              	100.00%
                    	       		I3LUC8              	51.02%
Bootstrap support for F6TFY3 as seed ortholog is 99%.
Bootstrap support for F1S0A2 as seed ortholog is 68%.
Alternative seed ortholog is F1RVH5 (12 bits away from this cluster)

Group of orthologs #2922. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.scrofa:114

F6UXM4              	100.00%		F1S0S2              	100.00%
                    	       		F1S4G0              	18.00%
Bootstrap support for F6UXM4 as seed ortholog is 99%.
Bootstrap support for F1S0S2 as seed ortholog is 99%.

Group of orthologs #2923. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 S.scrofa:262

F7AXZ4              	100.00%		F1SM88              	100.00%
                    	       		I3LE57              	72.59%
Bootstrap support for F7AXZ4 as seed ortholog is 100%.
Bootstrap support for F1SM88 as seed ortholog is 100%.

Group of orthologs #2924. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:196

H2XQS5              	100.00%		Q9TSX9              	100.00%
F7ADF2              	39.69%		
Bootstrap support for H2XQS5 as seed ortholog is 100%.
Bootstrap support for Q9TSX9 as seed ortholog is 100%.

Group of orthologs #2925. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.scrofa:262

F6TU56              	100.00%		D1H0P7              	100.00%
Bootstrap support for F6TU56 as seed ortholog is 100%.
Bootstrap support for D1H0P7 as seed ortholog is 100%.

Group of orthologs #2926. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 S.scrofa:262

F6UKV2              	100.00%		F1RS71              	100.00%
Bootstrap support for F6UKV2 as seed ortholog is 100%.
Bootstrap support for F1RS71 as seed ortholog is 100%.

Group of orthologs #2927. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 S.scrofa:64

F6QE62              	100.00%		F1SS60              	100.00%
Bootstrap support for F6QE62 as seed ortholog is 100%.
Bootstrap support for F1SS60 as seed ortholog is 98%.

Group of orthologs #2928. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.scrofa:39

F7ALJ0              	100.00%		F1SEA0              	100.00%
Bootstrap support for F7ALJ0 as seed ortholog is 98%.
Bootstrap support for F1SEA0 as seed ortholog is 90%.

Group of orthologs #2929. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 S.scrofa:262

F6ZQ39              	100.00%		F1STJ3              	100.00%
Bootstrap support for F6ZQ39 as seed ortholog is 100%.
Bootstrap support for F1STJ3 as seed ortholog is 100%.

Group of orthologs #2930. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 S.scrofa:158

F6ZJP7              	100.00%		F2Z5T7              	100.00%
Bootstrap support for F6ZJP7 as seed ortholog is 100%.
Bootstrap support for F2Z5T7 as seed ortholog is 100%.

Group of orthologs #2931. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 S.scrofa:190

F6X2B6              	100.00%		F1RTH7              	100.00%
                    	       		F1STS0              	25.81%
                    	       		I3L7D9              	6.65%
Bootstrap support for F6X2B6 as seed ortholog is 100%.
Bootstrap support for F1RTH7 as seed ortholog is 100%.

Group of orthologs #2932. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 S.scrofa:188

F6Z8I7              	100.00%		I3LP69              	100.00%
                    	       		F1SU21              	29.84%
Bootstrap support for F6Z8I7 as seed ortholog is 100%.
Bootstrap support for I3LP69 as seed ortholog is 99%.

Group of orthologs #2933. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 S.scrofa:261

F6TUV6              	100.00%		C9K506              	100.00%
Bootstrap support for F6TUV6 as seed ortholog is 100%.
Bootstrap support for C9K506 as seed ortholog is 100%.

Group of orthologs #2934. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 S.scrofa:32

F6URK3              	100.00%		F1RTW7              	100.00%
Bootstrap support for F6URK3 as seed ortholog is 100%.
Bootstrap support for F1RTW7 as seed ortholog is 90%.

Group of orthologs #2935. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 S.scrofa:261

F6W350              	100.00%		F1RVY4              	100.00%
Bootstrap support for F6W350 as seed ortholog is 100%.
Bootstrap support for F1RVY4 as seed ortholog is 100%.

Group of orthologs #2936. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 S.scrofa:261

F6WQS5              	100.00%		F1RZH8              	100.00%
Bootstrap support for F6WQS5 as seed ortholog is 100%.
Bootstrap support for F1RZH8 as seed ortholog is 100%.

Group of orthologs #2937. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:104

H2XMA1              	100.00%		F1RNZ4              	100.00%
Bootstrap support for H2XMA1 as seed ortholog is 100%.
Bootstrap support for F1RNZ4 as seed ortholog is 100%.

Group of orthologs #2938. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 S.scrofa:261

H2XL93              	100.00%		I3LR72              	100.00%
Bootstrap support for H2XL93 as seed ortholog is 100%.
Bootstrap support for I3LR72 as seed ortholog is 100%.

Group of orthologs #2939. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.scrofa:260

H2XSL2              	100.00%		F1RKC5              	100.00%
                    	       		F1RMG1              	37.69%
Bootstrap support for H2XSL2 as seed ortholog is 100%.
Bootstrap support for F1RKC5 as seed ortholog is 100%.

Group of orthologs #2940. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.scrofa:260

F6R939              	100.00%		F1S455              	100.00%
Bootstrap support for F6R939 as seed ortholog is 100%.
Bootstrap support for F1S455 as seed ortholog is 100%.

Group of orthologs #2941. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.scrofa:79

F6R192              	100.00%		F1SR87              	100.00%
Bootstrap support for F6R192 as seed ortholog is 100%.
Bootstrap support for F1SR87 as seed ortholog is 99%.

Group of orthologs #2942. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.scrofa:260

H2XZJ6              	100.00%		F1S283              	100.00%
Bootstrap support for H2XZJ6 as seed ortholog is 100%.
Bootstrap support for F1S283 as seed ortholog is 100%.

Group of orthologs #2943. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.scrofa:121

F7B860              	100.00%		I3L6P9              	100.00%
Bootstrap support for F7B860 as seed ortholog is 100%.
Bootstrap support for I3L6P9 as seed ortholog is 99%.

Group of orthologs #2944. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 S.scrofa:260

H2XWR7              	100.00%		F1SE09              	100.00%
Bootstrap support for H2XWR7 as seed ortholog is 100%.
Bootstrap support for F1SE09 as seed ortholog is 100%.

Group of orthologs #2945. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 S.scrofa:19

F6UAF0              	100.00%		P62936              	100.00%
                    	       		F1S2E3              	17.65%
Bootstrap support for F6UAF0 as seed ortholog is 69%.
Alternative seed ortholog is F6QXH6 (11 bits away from this cluster)
Bootstrap support for P62936 as seed ortholog is 81%.

Group of orthologs #2946. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 S.scrofa:259

F7BK27              	100.00%		F1RXR9              	100.00%
Bootstrap support for F7BK27 as seed ortholog is 100%.
Bootstrap support for F1RXR9 as seed ortholog is 100%.

Group of orthologs #2947. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 S.scrofa:259

F7BHD6              	100.00%		F1S5D3              	100.00%
Bootstrap support for F7BHD6 as seed ortholog is 100%.
Bootstrap support for F1S5D3 as seed ortholog is 100%.

Group of orthologs #2948. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 S.scrofa:259

F6VN74              	100.00%		F2Z5S7              	100.00%
Bootstrap support for F6VN74 as seed ortholog is 100%.
Bootstrap support for F2Z5S7 as seed ortholog is 100%.

Group of orthologs #2949. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 S.scrofa:259

F6YS62              	100.00%		F1SPI1              	100.00%
Bootstrap support for F6YS62 as seed ortholog is 100%.
Bootstrap support for F1SPI1 as seed ortholog is 100%.

Group of orthologs #2950. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 S.scrofa:46

F6WV27              	100.00%		I3L5T1              	100.00%
Bootstrap support for F6WV27 as seed ortholog is 100%.
Bootstrap support for I3L5T1 as seed ortholog is 85%.

Group of orthologs #2951. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 S.scrofa:259

H2XP93              	100.00%		F1SB61              	100.00%
Bootstrap support for H2XP93 as seed ortholog is 100%.
Bootstrap support for F1SB61 as seed ortholog is 100%.

Group of orthologs #2952. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.scrofa:138

F6SJF0              	100.00%		I3LP14              	100.00%
Bootstrap support for F6SJF0 as seed ortholog is 100%.
Bootstrap support for I3LP14 as seed ortholog is 100%.

Group of orthologs #2953. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 S.scrofa:258

F6VLF4              	100.00%		F2Z566              	100.00%
Bootstrap support for F6VLF4 as seed ortholog is 100%.
Bootstrap support for F2Z566 as seed ortholog is 100%.

Group of orthologs #2954. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 S.scrofa:258

H2XWQ2              	100.00%		F1RTR7              	100.00%
Bootstrap support for H2XWQ2 as seed ortholog is 100%.
Bootstrap support for F1RTR7 as seed ortholog is 100%.

Group of orthologs #2955. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 S.scrofa:258

H2XKD3              	100.00%		F1STS8              	100.00%
Bootstrap support for H2XKD3 as seed ortholog is 100%.
Bootstrap support for F1STS8 as seed ortholog is 100%.

Group of orthologs #2956. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 S.scrofa:258

H2XLN9              	100.00%		F2Z5N1              	100.00%
Bootstrap support for H2XLN9 as seed ortholog is 100%.
Bootstrap support for F2Z5N1 as seed ortholog is 100%.

Group of orthologs #2957. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.scrofa:190

Q256Z9              	100.00%		I3LU42              	100.00%
Bootstrap support for Q256Z9 as seed ortholog is 100%.
Bootstrap support for I3LU42 as seed ortholog is 100%.

Group of orthologs #2958. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.scrofa:257

F6UG92              	100.00%		I3L7I0              	100.00%
                    	       		F1SFH5              	31.27%
                    	       		F1SLU9              	18.98%
Bootstrap support for F6UG92 as seed ortholog is 100%.
Bootstrap support for I3L7I0 as seed ortholog is 100%.

Group of orthologs #2959. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.scrofa:257

F6ZYG1              	100.00%		F1SJW0              	100.00%
                    	       		I3L5W5              	30.41%
Bootstrap support for F6ZYG1 as seed ortholog is 100%.
Bootstrap support for F1SJW0 as seed ortholog is 100%.

Group of orthologs #2960. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.scrofa:257

F7AVM0              	100.00%		F1SH12              	100.00%
                    	       		I3LTV3              	25.95%
Bootstrap support for F7AVM0 as seed ortholog is 99%.
Bootstrap support for F1SH12 as seed ortholog is 100%.

Group of orthologs #2961. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.scrofa:257

F6YIK6              	100.00%		I3L8F8              	100.00%
                    	       		F1S6Z6              	21.49%
Bootstrap support for F6YIK6 as seed ortholog is 100%.
Bootstrap support for I3L8F8 as seed ortholog is 100%.

Group of orthologs #2962. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.scrofa:57

F6SA38              	100.00%		I3LRQ5              	100.00%
                    	       		F1S716              	5.31%
Bootstrap support for F6SA38 as seed ortholog is 100%.
Bootstrap support for I3LRQ5 as seed ortholog is 78%.

Group of orthologs #2963. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.scrofa:257

F6YYA5              	100.00%		F1RQF4              	100.00%
Bootstrap support for F6YYA5 as seed ortholog is 100%.
Bootstrap support for F1RQF4 as seed ortholog is 100%.

Group of orthologs #2964. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.scrofa:257

F6YMT8              	100.00%		F1S4Y4              	100.00%
Bootstrap support for F6YMT8 as seed ortholog is 100%.
Bootstrap support for F1S4Y4 as seed ortholog is 100%.

Group of orthologs #2965. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.scrofa:120

H2XUE7              	100.00%		F1RJI4              	100.00%
Bootstrap support for H2XUE7 as seed ortholog is 100%.
Bootstrap support for F1RJI4 as seed ortholog is 99%.

Group of orthologs #2966. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.scrofa:257

F6X9U7              	100.00%		I3LR29              	100.00%
Bootstrap support for F6X9U7 as seed ortholog is 100%.
Bootstrap support for I3LR29 as seed ortholog is 100%.

Group of orthologs #2967. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 S.scrofa:257

H2XXD0              	100.00%		I3LL24              	100.00%
Bootstrap support for H2XXD0 as seed ortholog is 100%.
Bootstrap support for I3LL24 as seed ortholog is 100%.

Group of orthologs #2968. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.scrofa:48

F6R8W1              	100.00%		P18871              	100.00%
                    	       		I3LFJ1              	28.10%
                    	       		Q38PT0              	24.62%
Bootstrap support for F6R8W1 as seed ortholog is 96%.
Bootstrap support for P18871 as seed ortholog is 98%.

Group of orthologs #2969. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 S.scrofa:256

F6RQZ5              	100.00%		F1S0W3              	100.00%
                    	       		F1S2M9              	7.11%
Bootstrap support for F6RQZ5 as seed ortholog is 100%.
Bootstrap support for F1S0W3 as seed ortholog is 100%.

Group of orthologs #2970. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.scrofa:64

F6Y7X3              	100.00%		F1RLS0              	100.00%
                    	       		I3LEN5              	5.06%
Bootstrap support for F6Y7X3 as seed ortholog is 97%.
Bootstrap support for F1RLS0 as seed ortholog is 96%.

Group of orthologs #2971. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.scrofa:108

F6YIF4              	100.00%		A9QT42              	100.00%
Bootstrap support for F6YIF4 as seed ortholog is 99%.
Bootstrap support for A9QT42 as seed ortholog is 99%.

Group of orthologs #2972. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 S.scrofa:180

F6PR96              	100.00%		F1SK45              	100.00%
Bootstrap support for F6PR96 as seed ortholog is 100%.
Bootstrap support for F1SK45 as seed ortholog is 100%.

Group of orthologs #2973. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 S.scrofa:256

F6ZSB0              	100.00%		F1RX84              	100.00%
Bootstrap support for F6ZSB0 as seed ortholog is 100%.
Bootstrap support for F1RX84 as seed ortholog is 100%.

Group of orthologs #2974. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 S.scrofa:131

F7AFF3              	100.00%		F1S3T2              	100.00%
Bootstrap support for F7AFF3 as seed ortholog is 100%.
Bootstrap support for F1S3T2 as seed ortholog is 99%.

Group of orthologs #2975. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 S.scrofa:256

F6ZQX9              	100.00%		F1S935              	100.00%
Bootstrap support for F6ZQX9 as seed ortholog is 100%.
Bootstrap support for F1S935 as seed ortholog is 100%.

Group of orthologs #2976. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 S.scrofa:256

F6X2R6              	100.00%		F2Z517              	100.00%
Bootstrap support for F6X2R6 as seed ortholog is 100%.
Bootstrap support for F2Z517 as seed ortholog is 100%.

Group of orthologs #2977. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 S.scrofa:256

F6Z227              	100.00%		I3LIQ1              	100.00%
Bootstrap support for F6Z227 as seed ortholog is 100%.
Bootstrap support for I3LIQ1 as seed ortholog is 100%.

Group of orthologs #2978. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 S.scrofa:255

F6QAM3              	100.00%		F1SUD4              	100.00%
F6QAL4              	85.39%		
F6X1X1              	30.45%		
Bootstrap support for F6QAM3 as seed ortholog is 70%.
Alternative seed ortholog is F6X593 (2 bits away from this cluster)
Bootstrap support for F1SUD4 as seed ortholog is 100%.

Group of orthologs #2979. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:63

F6WJD2              	100.00%		I3LFD7              	100.00%
                    	       		I3LIG7              	14.06%
Bootstrap support for F6WJD2 as seed ortholog is 98%.
Bootstrap support for I3LFD7 as seed ortholog is 96%.

Group of orthologs #2980. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 S.scrofa:255

F6UA18              	100.00%		F1S1G1              	100.00%
Bootstrap support for F6UA18 as seed ortholog is 100%.
Bootstrap support for F1S1G1 as seed ortholog is 100%.

Group of orthologs #2981. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 S.scrofa:255

F6QNA6              	100.00%		F1SDV0              	100.00%
Bootstrap support for F6QNA6 as seed ortholog is 100%.
Bootstrap support for F1SDV0 as seed ortholog is 100%.

Group of orthologs #2982. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 S.scrofa:69

H2XSB5              	100.00%		B0LUH2              	100.00%
Bootstrap support for H2XSB5 as seed ortholog is 100%.
Bootstrap support for B0LUH2 as seed ortholog is 98%.

Group of orthologs #2983. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 S.scrofa:255

F6YC34              	100.00%		F1SIE3              	100.00%
Bootstrap support for F6YC34 as seed ortholog is 100%.
Bootstrap support for F1SIE3 as seed ortholog is 100%.

Group of orthologs #2984. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 S.scrofa:124

F6QE09              	100.00%		I3LJG1              	100.00%
Bootstrap support for F6QE09 as seed ortholog is 93%.
Bootstrap support for I3LJG1 as seed ortholog is 100%.

Group of orthologs #2985. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 S.scrofa:255

F7B7F7              	100.00%		F1SU05              	100.00%
Bootstrap support for F7B7F7 as seed ortholog is 100%.
Bootstrap support for F1SU05 as seed ortholog is 100%.

Group of orthologs #2986. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 S.scrofa:255

F7BI62              	100.00%		I3LN50              	100.00%
Bootstrap support for F7BI62 as seed ortholog is 100%.
Bootstrap support for I3LN50 as seed ortholog is 100%.

Group of orthologs #2987. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.scrofa:32

F6Y7E9              	100.00%		F1RWI5              	100.00%
                    	       		F1SQ77              	8.20%
Bootstrap support for F6Y7E9 as seed ortholog is 100%.
Bootstrap support for F1RWI5 as seed ortholog is 91%.

Group of orthologs #2988. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.scrofa:83

F6V7V1              	100.00%		I3LKX9              	100.00%
                    	       		I3LDB1              	94.47%
Bootstrap support for F6V7V1 as seed ortholog is 100%.
Bootstrap support for I3LKX9 as seed ortholog is 95%.

Group of orthologs #2989. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.scrofa:254

F6VXD9              	100.00%		Q4PJJ8              	100.00%
                    	       		Q03365              	28.93%
Bootstrap support for F6VXD9 as seed ortholog is 100%.
Bootstrap support for Q4PJJ8 as seed ortholog is 100%.

Group of orthologs #2990. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.scrofa:35

F6WZU2              	100.00%		F1RUN9              	100.00%
Bootstrap support for F6WZU2 as seed ortholog is 100%.
Bootstrap support for F1RUN9 as seed ortholog is 85%.

Group of orthologs #2991. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.scrofa:71

F6Y844              	100.00%		F1RXT6              	100.00%
Bootstrap support for F6Y844 as seed ortholog is 100%.
Bootstrap support for F1RXT6 as seed ortholog is 99%.

Group of orthologs #2992. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.scrofa:254

F6RPC5              	100.00%		F1SME6              	100.00%
Bootstrap support for F6RPC5 as seed ortholog is 100%.
Bootstrap support for F1SME6 as seed ortholog is 100%.

Group of orthologs #2993. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.scrofa:254

H2XPX2              	100.00%		F1S3D6              	100.00%
Bootstrap support for H2XPX2 as seed ortholog is 100%.
Bootstrap support for F1S3D6 as seed ortholog is 100%.

Group of orthologs #2994. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.scrofa:254

F6YJB7              	100.00%		F1SSH0              	100.00%
Bootstrap support for F6YJB7 as seed ortholog is 100%.
Bootstrap support for F1SSH0 as seed ortholog is 100%.

Group of orthologs #2995. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 S.scrofa:155

H2XWI8              	100.00%		F1RXD4              	100.00%
Bootstrap support for H2XWI8 as seed ortholog is 100%.
Bootstrap support for F1RXD4 as seed ortholog is 100%.

Group of orthologs #2996. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.scrofa:253

F6T1Y9              	100.00%		F1RLM2              	100.00%
                    	       		I3LKD4              	94.10%
                    	       		F1RX98              	78.69%
Bootstrap support for F6T1Y9 as seed ortholog is 100%.
Bootstrap support for F1RLM2 as seed ortholog is 100%.

Group of orthologs #2997. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.scrofa:3

H2XJX5              	100.00%		F1RG54              	100.00%
F6QRT7              	8.96%		I3LRY0              	10.06%
Bootstrap support for H2XJX5 as seed ortholog is 100%.
Bootstrap support for F1RG54 as seed ortholog is 55%.
Alternative seed ortholog is F1SV24 (3 bits away from this cluster)

Group of orthologs #2998. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.scrofa:147

F6Y6X7              	100.00%		F1RGC0              	100.00%
                    	       		I3LK51              	55.00%
Bootstrap support for F6Y6X7 as seed ortholog is 100%.
Bootstrap support for F1RGC0 as seed ortholog is 100%.

Group of orthologs #2999. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.scrofa:253

F6V7W7              	100.00%		F1RXE4              	100.00%
                    	       		F1ST78              	5.59%
Bootstrap support for F6V7W7 as seed ortholog is 100%.
Bootstrap support for F1RXE4 as seed ortholog is 100%.

Group of orthologs #3000. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.scrofa:253

F7B6C9              	100.00%		I3LBP7              	100.00%
                    	       		F1SV67              	54.40%
Bootstrap support for F7B6C9 as seed ortholog is 100%.
Bootstrap support for I3LBP7 as seed ortholog is 100%.

Group of orthologs #3001. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.scrofa:253

F6PPJ7              	100.00%		F1RSM9              	100.00%
Bootstrap support for F6PPJ7 as seed ortholog is 100%.
Bootstrap support for F1RSM9 as seed ortholog is 100%.

Group of orthologs #3002. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.scrofa:253

F6SWM7              	100.00%		F1RK85              	100.00%
Bootstrap support for F6SWM7 as seed ortholog is 100%.
Bootstrap support for F1RK85 as seed ortholog is 100%.

Group of orthologs #3003. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.scrofa:207

F6R982              	100.00%		F1ST42              	100.00%
Bootstrap support for F6R982 as seed ortholog is 100%.
Bootstrap support for F1ST42 as seed ortholog is 100%.

Group of orthologs #3004. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.scrofa:151

F6XMP2              	100.00%		F1SDS1              	100.00%
Bootstrap support for F6XMP2 as seed ortholog is 100%.
Bootstrap support for F1SDS1 as seed ortholog is 100%.

Group of orthologs #3005. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.scrofa:253

F6WCC6              	100.00%		F1SQF7              	100.00%
Bootstrap support for F6WCC6 as seed ortholog is 100%.
Bootstrap support for F1SQF7 as seed ortholog is 100%.

Group of orthologs #3006. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.scrofa:253

F6WQJ1              	100.00%		F1SST1              	100.00%
Bootstrap support for F6WQJ1 as seed ortholog is 100%.
Bootstrap support for F1SST1 as seed ortholog is 100%.

Group of orthologs #3007. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.scrofa:253

H2XNG1              	100.00%		F1S6K3              	100.00%
Bootstrap support for H2XNG1 as seed ortholog is 100%.
Bootstrap support for F1S6K3 as seed ortholog is 100%.

Group of orthologs #3008. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.scrofa:253

H2Y0Q6              	100.00%		F1S3I3              	100.00%
Bootstrap support for H2Y0Q6 as seed ortholog is 100%.
Bootstrap support for F1S3I3 as seed ortholog is 100%.

Group of orthologs #3009. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.scrofa:123

F6W7N8              	100.00%		I3LK72              	100.00%
Bootstrap support for F6W7N8 as seed ortholog is 100%.
Bootstrap support for I3LK72 as seed ortholog is 99%.

Group of orthologs #3010. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 S.scrofa:253

F6WYD9              	100.00%		I3LNL5              	100.00%
Bootstrap support for F6WYD9 as seed ortholog is 100%.
Bootstrap support for I3LNL5 as seed ortholog is 100%.

Group of orthologs #3011. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 S.scrofa:56

H2XS07              	100.00%		F1RK80              	100.00%
H2XXY1              	18.35%		F1RK79              	55.51%
F6U667              	11.62%		
Bootstrap support for H2XS07 as seed ortholog is 86%.
Bootstrap support for F1RK80 as seed ortholog is 94%.

Group of orthologs #3012. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 S.scrofa:70

F6RGI4              	100.00%		Q6QAS5              	100.00%
                    	       		I3LBH4              	56.49%
                    	       		I3LBL3              	51.91%
                    	       		I3LFQ4              	27.48%
Bootstrap support for F6RGI4 as seed ortholog is 100%.
Bootstrap support for Q6QAS5 as seed ortholog is 99%.

Group of orthologs #3013. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 S.scrofa:252

F6X0F3              	100.00%		Q2XVP5              	100.00%
                    	       		I3LQA8              	33.45%
                    	       		F1SAJ9              	20.34%
Bootstrap support for F6X0F3 as seed ortholog is 100%.
Bootstrap support for Q2XVP5 as seed ortholog is 100%.

Group of orthologs #3014. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 S.scrofa:73

F7B4T0              	100.00%		I3L7V2              	100.00%
                    	       		I3LFP0              	100.00%
Bootstrap support for F7B4T0 as seed ortholog is 100%.
Bootstrap support for I3L7V2 as seed ortholog is 99%.
Bootstrap support for I3LFP0 as seed ortholog is 99%.

Group of orthologs #3015. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:156

F6XDJ2              	100.00%		C8C419              	100.00%
Bootstrap support for F6XDJ2 as seed ortholog is 100%.
Bootstrap support for C8C419 as seed ortholog is 99%.

Group of orthologs #3016. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 S.scrofa:142

F7AUY7              	100.00%		F1RJC9              	100.00%
Bootstrap support for F7AUY7 as seed ortholog is 100%.
Bootstrap support for F1RJC9 as seed ortholog is 100%.

Group of orthologs #3017. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 S.scrofa:252

F6R924              	100.00%		I3LRV0              	100.00%
Bootstrap support for F6R924 as seed ortholog is 100%.
Bootstrap support for I3LRV0 as seed ortholog is 100%.

Group of orthologs #3018. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 S.scrofa:252

F7ANK8              	100.00%		I3LMF8              	100.00%
Bootstrap support for F7ANK8 as seed ortholog is 100%.
Bootstrap support for I3LMF8 as seed ortholog is 100%.

Group of orthologs #3019. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 S.scrofa:251

F6PP67              	100.00%		F1RIY4              	100.00%
                    	       		I3LV16              	15.33%
Bootstrap support for F6PP67 as seed ortholog is 100%.
Bootstrap support for F1RIY4 as seed ortholog is 100%.

Group of orthologs #3020. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 S.scrofa:251

F6Q021              	100.00%		I3LVQ6              	100.00%
                    	       		F1S134              	48.79%
Bootstrap support for F6Q021 as seed ortholog is 100%.
Bootstrap support for I3LVQ6 as seed ortholog is 100%.

Group of orthologs #3021. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 S.scrofa:251

F6TUU8              	100.00%		F1RFW4              	100.00%
Bootstrap support for F6TUU8 as seed ortholog is 100%.
Bootstrap support for F1RFW4 as seed ortholog is 100%.

Group of orthologs #3022. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.scrofa:151

F6RXD4              	100.00%		F1RME0              	100.00%
Bootstrap support for F6RXD4 as seed ortholog is 100%.
Bootstrap support for F1RME0 as seed ortholog is 100%.

Group of orthologs #3023. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 S.scrofa:251

H2XZ71              	100.00%		I3L6Q2              	100.00%
Bootstrap support for H2XZ71 as seed ortholog is 100%.
Bootstrap support for I3L6Q2 as seed ortholog is 100%.

Group of orthologs #3024. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 S.scrofa:251

H2XXS5              	100.00%		I3LJ77              	100.00%
Bootstrap support for H2XXS5 as seed ortholog is 100%.
Bootstrap support for I3LJ77 as seed ortholog is 100%.

Group of orthologs #3025. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 S.scrofa:250

F7AMQ9              	100.00%		I3LHY7              	100.00%
                    	       		F1S0N3              	71.60%
                    	       		F1STV6              	11.83%
Bootstrap support for F7AMQ9 as seed ortholog is 39%.
Alternative seed ortholog is F6XJ57 (7 bits away from this cluster)
Bootstrap support for I3LHY7 as seed ortholog is 100%.

Group of orthologs #3026. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 S.scrofa:92

F6QGN1              	100.00%		F1RIA0              	100.00%
                    	       		F1RF45              	20.75%
Bootstrap support for F6QGN1 as seed ortholog is 100%.
Bootstrap support for F1RIA0 as seed ortholog is 99%.

Group of orthologs #3027. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 S.scrofa:123

F6SLU0              	100.00%		F1SDD5              	100.00%
                    	       		I3LJJ8              	34.91%
Bootstrap support for F6SLU0 as seed ortholog is 64%.
Alternative seed ortholog is H2XRV4 (7 bits away from this cluster)
Bootstrap support for F1SDD5 as seed ortholog is 99%.

Group of orthologs #3028. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.scrofa:112

F6ZHQ2              	100.00%		F1RYC4              	100.00%
                    	       		F1SRI1              	47.27%
Bootstrap support for F6ZHQ2 as seed ortholog is 99%.
Bootstrap support for F1RYC4 as seed ortholog is 99%.

Group of orthologs #3029. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 S.scrofa:250

F6YIB7              	100.00%		I3L807              	100.00%
                    	       		I3LK44              	99.18%
Bootstrap support for F6YIB7 as seed ortholog is 100%.
Bootstrap support for I3L807 as seed ortholog is 100%.

Group of orthologs #3030. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 S.scrofa:250

F6VBS7              	100.00%		F1RKJ9              	100.00%
Bootstrap support for F6VBS7 as seed ortholog is 100%.
Bootstrap support for F1RKJ9 as seed ortholog is 100%.

Group of orthologs #3031. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.scrofa:91

F6WBC7              	100.00%		F1RX14              	100.00%
Bootstrap support for F6WBC7 as seed ortholog is 99%.
Bootstrap support for F1RX14 as seed ortholog is 100%.

Group of orthologs #3032. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 S.scrofa:250

F6QU62              	100.00%		F1SUU5              	100.00%
Bootstrap support for F6QU62 as seed ortholog is 100%.
Bootstrap support for F1SUU5 as seed ortholog is 100%.

Group of orthologs #3033. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 S.scrofa:250

F6WHP2              	100.00%		F1SF92              	100.00%
Bootstrap support for F6WHP2 as seed ortholog is 100%.
Bootstrap support for F1SF92 as seed ortholog is 100%.

Group of orthologs #3034. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 S.scrofa:70

F7A765              	100.00%		F1S2X8              	100.00%
Bootstrap support for F7A765 as seed ortholog is 100%.
Bootstrap support for F1S2X8 as seed ortholog is 96%.

Group of orthologs #3035. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 S.scrofa:144

H2XW45              	100.00%		F1SFL1              	100.00%
Bootstrap support for H2XW45 as seed ortholog is 100%.
Bootstrap support for F1SFL1 as seed ortholog is 100%.

Group of orthologs #3036. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 S.scrofa:74

Q95P33              	100.00%		O18766              	100.00%
F6YTW2              	27.09%		F1SMN2              	13.28%
Bootstrap support for Q95P33 as seed ortholog is 100%.
Bootstrap support for O18766 as seed ortholog is 98%.

Group of orthologs #3037. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 S.scrofa:34

F6UUI1              	100.00%		K7GMZ5              	100.00%
                    	       		I3LVB8              	52.31%
Bootstrap support for F6UUI1 as seed ortholog is 100%.
Bootstrap support for K7GMZ5 as seed ortholog is 96%.

Group of orthologs #3038. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 S.scrofa:249

Q1RLF9              	100.00%		F1S9J8              	100.00%
                    	       		F1RSG3              	24.02%
Bootstrap support for Q1RLF9 as seed ortholog is 100%.
Bootstrap support for F1S9J8 as seed ortholog is 100%.

Group of orthologs #3039. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 S.scrofa:249

F6ZC01              	100.00%		F1RT14              	100.00%
Bootstrap support for F6ZC01 as seed ortholog is 100%.
Bootstrap support for F1RT14 as seed ortholog is 100%.

Group of orthologs #3040. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.scrofa:131

F6S2W5              	100.00%		F1SQ14              	100.00%
Bootstrap support for F6S2W5 as seed ortholog is 100%.
Bootstrap support for F1SQ14 as seed ortholog is 100%.

Group of orthologs #3041. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.scrofa:64

F6XT60              	100.00%		F1SPG0              	100.00%
Bootstrap support for F6XT60 as seed ortholog is 100%.
Bootstrap support for F1SPG0 as seed ortholog is 99%.

Group of orthologs #3042. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 S.scrofa:249

F6YKG0              	100.00%		F1STE3              	100.00%
Bootstrap support for F6YKG0 as seed ortholog is 100%.
Bootstrap support for F1STE3 as seed ortholog is 100%.

Group of orthologs #3043. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 S.scrofa:189

F7B4Q5              	100.00%		F1SN01              	100.00%
Bootstrap support for F7B4Q5 as seed ortholog is 100%.
Bootstrap support for F1SN01 as seed ortholog is 99%.

Group of orthologs #3044. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 S.scrofa:249

F6ZN66              	100.00%		I3LP78              	100.00%
Bootstrap support for F6ZN66 as seed ortholog is 100%.
Bootstrap support for I3LP78 as seed ortholog is 100%.

Group of orthologs #3045. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 S.scrofa:248

Q1RL20              	100.00%		F1SKC8              	100.00%
F6WI19              	84.19%		F1RP23              	25.61%
H2XMP0              	55.24%		
Q1RL21              	53.39%		
H2XZ50              	49.90%		
Bootstrap support for Q1RL20 as seed ortholog is 100%.
Bootstrap support for F1SKC8 as seed ortholog is 100%.

Group of orthologs #3046. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:65

F6UJX7              	100.00%		Q29042              	100.00%
F6UAK1              	46.06%		Q29041              	68.25%
F6WBD4              	42.86%		
F6T4X9              	41.87%		
Bootstrap support for F6UJX7 as seed ortholog is 89%.
Bootstrap support for Q29042 as seed ortholog is 95%.

Group of orthologs #3047. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:4

F6WJT4              	100.00%		F1RFS1              	100.00%
                    	       		I3LN82              	59.16%
                    	       		F1RFS3              	20.10%
                    	       		I3L8Z6              	17.18%
Bootstrap support for F6WJT4 as seed ortholog is 98%.
Bootstrap support for F1RFS1 as seed ortholog is 48%.
Alternative seed ortholog is F1S621 (4 bits away from this cluster)

Group of orthologs #3048. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 S.scrofa:248

F7AD34              	100.00%		F1RWY0              	100.00%
                    	       		Q06AA3              	99.20%
Bootstrap support for F7AD34 as seed ortholog is 100%.
Bootstrap support for F1RWY0 as seed ortholog is 100%.

Group of orthologs #3049. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 S.scrofa:248

F6TQ55              	100.00%		F1RN72              	100.00%
Bootstrap support for F6TQ55 as seed ortholog is 100%.
Bootstrap support for F1RN72 as seed ortholog is 100%.

Group of orthologs #3050. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 S.scrofa:248

F6ZBY5              	100.00%		F1RPV1              	100.00%
Bootstrap support for F6ZBY5 as seed ortholog is 100%.
Bootstrap support for F1RPV1 as seed ortholog is 100%.

Group of orthologs #3051. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 S.scrofa:248

F6ZLT0              	100.00%		F1S1L4              	100.00%
Bootstrap support for F6ZLT0 as seed ortholog is 100%.
Bootstrap support for F1S1L4 as seed ortholog is 100%.

Group of orthologs #3052. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 S.scrofa:248

F6Y9F6              	100.00%		F1S9G9              	100.00%
Bootstrap support for F6Y9F6 as seed ortholog is 100%.
Bootstrap support for F1S9G9 as seed ortholog is 100%.

Group of orthologs #3053. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.scrofa:33

F6S566              	100.00%		I3L6C9              	100.00%
Bootstrap support for F6S566 as seed ortholog is 99%.
Bootstrap support for I3L6C9 as seed ortholog is 28%.
Alternative seed ortholog is I3LTJ3 (33 bits away from this cluster)

Group of orthologs #3054. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 S.scrofa:86

F6UTK0              	100.00%		F2Z5L8              	100.00%
Bootstrap support for F6UTK0 as seed ortholog is 100%.
Bootstrap support for F2Z5L8 as seed ortholog is 99%.

Group of orthologs #3055. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.scrofa:248

H2Y2D4              	100.00%		F1RKR0              	100.00%
Bootstrap support for H2Y2D4 as seed ortholog is 99%.
Bootstrap support for F1RKR0 as seed ortholog is 100%.

Group of orthologs #3056. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 S.scrofa:247

F7AXI1              	100.00%		I3LAH6              	100.00%
                    	       		F1SPP9              	72.41%
                    	       		F1RZ12              	11.21%
                    	       		I3LRB9              	8.45%
Bootstrap support for F7AXI1 as seed ortholog is 100%.
Bootstrap support for I3LAH6 as seed ortholog is 100%.

Group of orthologs #3057. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 S.scrofa:247

F6TXK0              	100.00%		F1S2K9              	100.00%
                    	       		F1RSL3              	6.64%
Bootstrap support for F6TXK0 as seed ortholog is 100%.
Bootstrap support for F1S2K9 as seed ortholog is 100%.

Group of orthologs #3058. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 S.scrofa:247

F6ZCI6              	100.00%		F1SV31              	100.00%
                    	       		F1RRE7              	16.95%
Bootstrap support for F6ZCI6 as seed ortholog is 100%.
Bootstrap support for F1SV31 as seed ortholog is 100%.

Group of orthologs #3059. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.scrofa:52

F7BAU4              	100.00%		I3LB07              	100.00%
                    	       		I3L9X9              	99.25%
Bootstrap support for F7BAU4 as seed ortholog is 96%.
Bootstrap support for I3LB07 as seed ortholog is 90%.

Group of orthologs #3060. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 S.scrofa:247

F6R1Q7              	100.00%		A3QRX8              	100.00%
Bootstrap support for F6R1Q7 as seed ortholog is 100%.
Bootstrap support for A3QRX8 as seed ortholog is 100%.

Group of orthologs #3061. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 S.scrofa:247

F6TWS7              	100.00%		F1SJB3              	100.00%
Bootstrap support for F6TWS7 as seed ortholog is 100%.
Bootstrap support for F1SJB3 as seed ortholog is 100%.

Group of orthologs #3062. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.scrofa:247

F6TZ23              	100.00%		F1SQR9              	100.00%
Bootstrap support for F6TZ23 as seed ortholog is 100%.
Bootstrap support for F1SQR9 as seed ortholog is 100%.

Group of orthologs #3063. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 S.scrofa:247

F6YSG2              	100.00%		F1SBA9              	100.00%
Bootstrap support for F6YSG2 as seed ortholog is 100%.
Bootstrap support for F1SBA9 as seed ortholog is 100%.

Group of orthologs #3064. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 S.scrofa:247

H2Y0I5              	100.00%		F1RLH1              	100.00%
Bootstrap support for H2Y0I5 as seed ortholog is 100%.
Bootstrap support for F1RLH1 as seed ortholog is 100%.

Group of orthologs #3065. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 S.scrofa:247

F6WS42              	100.00%		I3LE45              	100.00%
Bootstrap support for F6WS42 as seed ortholog is 100%.
Bootstrap support for I3LE45 as seed ortholog is 100%.

Group of orthologs #3066. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.scrofa:81

F7AI19              	100.00%		F2Z5G0              	100.00%
Bootstrap support for F7AI19 as seed ortholog is 94%.
Bootstrap support for F2Z5G0 as seed ortholog is 98%.

Group of orthologs #3067. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.scrofa:81

F7A771              	100.00%		I3L6I7              	100.00%
Bootstrap support for F7A771 as seed ortholog is 99%.
Bootstrap support for I3L6I7 as seed ortholog is 99%.

Group of orthologs #3068. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 S.scrofa:155

F6X134              	100.00%		I3LQS0              	100.00%
Bootstrap support for F6X134 as seed ortholog is 100%.
Bootstrap support for I3LQS0 as seed ortholog is 99%.

Group of orthologs #3069. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 S.scrofa:247

H2XQQ0              	100.00%		Q19QU3              	100.00%
Bootstrap support for H2XQQ0 as seed ortholog is 100%.
Bootstrap support for Q19QU3 as seed ortholog is 100%.

Group of orthologs #3070. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 S.scrofa:246

H2XX58              	100.00%		F1RVV1              	100.00%
                    	       		F1RPC7              	12.13%
Bootstrap support for H2XX58 as seed ortholog is 100%.
Bootstrap support for F1RVV1 as seed ortholog is 100%.

Group of orthologs #3071. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:96

F6RZT0              	100.00%		F1S131              	100.00%
Bootstrap support for F6RZT0 as seed ortholog is 99%.
Bootstrap support for F1S131 as seed ortholog is 99%.

Group of orthologs #3072. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 S.scrofa:246

F6V9A1              	100.00%		F2Z4Y8              	100.00%
Bootstrap support for F6V9A1 as seed ortholog is 100%.
Bootstrap support for F2Z4Y8 as seed ortholog is 100%.

Group of orthologs #3073. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 S.scrofa:246

H2XMH5              	100.00%		I3LHM8              	100.00%
Bootstrap support for H2XMH5 as seed ortholog is 100%.
Bootstrap support for I3LHM8 as seed ortholog is 100%.

Group of orthologs #3074. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:245

F6Z8E9              	100.00%		I3LAM6              	100.00%
                    	       		K7GM25              	16.61%
                    	       		F1RP48              	15.73%
Bootstrap support for F6Z8E9 as seed ortholog is 100%.
Bootstrap support for I3LAM6 as seed ortholog is 100%.

Group of orthologs #3075. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:245

F6WUG3              	100.00%		F1RX51              	100.00%
                    	       		K7GS62              	75.97%
Bootstrap support for F6WUG3 as seed ortholog is 100%.
Bootstrap support for F1RX51 as seed ortholog is 100%.

Group of orthologs #3076. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:245

F6XJ18              	100.00%		F1RXF7              	100.00%
                    	       		F1RTK5              	31.10%
Bootstrap support for F6XJ18 as seed ortholog is 100%.
Bootstrap support for F1RXF7 as seed ortholog is 100%.

Group of orthologs #3077. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:245

F7B0F3              	100.00%		F1RUA7              	100.00%
                    	       		F1S1S0              	44.63%
Bootstrap support for F7B0F3 as seed ortholog is 100%.
Bootstrap support for F1RUA7 as seed ortholog is 100%.

Group of orthologs #3078. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:245

F6Q7X0              	100.00%		F1S771              	100.00%
Bootstrap support for F6Q7X0 as seed ortholog is 100%.
Bootstrap support for F1S771 as seed ortholog is 100%.

Group of orthologs #3079. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:245

F6VXB1              	100.00%		F1RUS8              	100.00%
Bootstrap support for F6VXB1 as seed ortholog is 100%.
Bootstrap support for F1RUS8 as seed ortholog is 100%.

Group of orthologs #3080. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:245

F6V2H0              	100.00%		F1RYY7              	100.00%
Bootstrap support for F6V2H0 as seed ortholog is 100%.
Bootstrap support for F1RYY7 as seed ortholog is 100%.

Group of orthologs #3081. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:245

F6YVR5              	100.00%		F1S4X6              	100.00%
Bootstrap support for F6YVR5 as seed ortholog is 100%.
Bootstrap support for F1S4X6 as seed ortholog is 100%.

Group of orthologs #3082. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:245

F6VKL4              	100.00%		F1STB1              	100.00%
Bootstrap support for F6VKL4 as seed ortholog is 100%.
Bootstrap support for F1STB1 as seed ortholog is 100%.

Group of orthologs #3083. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:245

F6YGG6              	100.00%		F1SJ73              	100.00%
Bootstrap support for F6YGG6 as seed ortholog is 100%.
Bootstrap support for F1SJ73 as seed ortholog is 100%.

Group of orthologs #3084. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:115

H2XS72              	100.00%		F1S3W1              	100.00%
Bootstrap support for H2XS72 as seed ortholog is 100%.
Bootstrap support for F1S3W1 as seed ortholog is 99%.

Group of orthologs #3085. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:245

F7BMB7              	100.00%		F1SHU0              	100.00%
Bootstrap support for F7BMB7 as seed ortholog is 100%.
Bootstrap support for F1SHU0 as seed ortholog is 100%.

Group of orthologs #3086. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:245

H2XM43              	100.00%		F1SKK3              	100.00%
Bootstrap support for H2XM43 as seed ortholog is 100%.
Bootstrap support for F1SKK3 as seed ortholog is 100%.

Group of orthologs #3087. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:245

H2Y0K3              	100.00%		F1S8B0              	100.00%
Bootstrap support for H2Y0K3 as seed ortholog is 100%.
Bootstrap support for F1S8B0 as seed ortholog is 100%.

Group of orthologs #3088. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:245

Q1RPU5              	100.00%		F1S705              	100.00%
Bootstrap support for Q1RPU5 as seed ortholog is 100%.
Bootstrap support for F1S705 as seed ortholog is 100%.

Group of orthologs #3089. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 S.scrofa:47

F6XLN4              	100.00%		I3LSM4              	100.00%
Bootstrap support for F6XLN4 as seed ortholog is 100%.
Bootstrap support for I3LSM4 as seed ortholog is 99%.

Group of orthologs #3090. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 S.scrofa:244

F6T1T3              	100.00%		F1RLI6              	100.00%
Bootstrap support for F6T1T3 as seed ortholog is 100%.
Bootstrap support for F1RLI6 as seed ortholog is 100%.

Group of orthologs #3091. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 S.scrofa:244

F6WZJ4              	100.00%		F1SJL3              	100.00%
Bootstrap support for F6WZJ4 as seed ortholog is 100%.
Bootstrap support for F1SJL3 as seed ortholog is 100%.

Group of orthologs #3092. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 S.scrofa:244

F6U182              	100.00%		F2Z5T8              	100.00%
Bootstrap support for F6U182 as seed ortholog is 100%.
Bootstrap support for F2Z5T8 as seed ortholog is 100%.

Group of orthologs #3093. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 S.scrofa:82

F6ZBW6              	100.00%		F1SG73              	100.00%
Bootstrap support for F6ZBW6 as seed ortholog is 100%.
Bootstrap support for F1SG73 as seed ortholog is 99%.

Group of orthologs #3094. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 S.scrofa:244

F6WSV9              	100.00%		I3LDF4              	100.00%
Bootstrap support for F6WSV9 as seed ortholog is 100%.
Bootstrap support for I3LDF4 as seed ortholog is 100%.

Group of orthologs #3095. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:130

F6PJV8              	100.00%		Q06AB2              	100.00%
Bootstrap support for F6PJV8 as seed ortholog is 99%.
Bootstrap support for Q06AB2 as seed ortholog is 100%.

Group of orthologs #3096. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 S.scrofa:244

H2XX93              	100.00%		I3LRY6              	100.00%
Bootstrap support for H2XX93 as seed ortholog is 100%.
Bootstrap support for I3LRY6 as seed ortholog is 100%.

Group of orthologs #3097. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.scrofa:243

F7A2P1              	100.00%		F1RGT2              	100.00%
                    	       		F1RHB9              	12.23%
                    	       		F1SHH1              	7.95%
Bootstrap support for F7A2P1 as seed ortholog is 100%.
Bootstrap support for F1RGT2 as seed ortholog is 100%.

Group of orthologs #3098. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 S.scrofa:243

F6VDE1              	100.00%		F1S3I9              	100.00%
                    	       		F1S3J0              	57.93%
                    	       		F1SSB1              	21.68%
Bootstrap support for F6VDE1 as seed ortholog is 99%.
Bootstrap support for F1S3I9 as seed ortholog is 100%.

Group of orthologs #3099. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:152

F7A9X0              	100.00%		F1RFR1              	100.00%
                    	       		K7GRD1              	8.86%
Bootstrap support for F7A9X0 as seed ortholog is 99%.
Bootstrap support for F1RFR1 as seed ortholog is 100%.

Group of orthologs #3100. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.scrofa:243

F6WML9              	100.00%		F1SIE0              	100.00%
                    	       		F1RVS8              	16.00%
Bootstrap support for F6WML9 as seed ortholog is 100%.
Bootstrap support for F1SIE0 as seed ortholog is 100%.

Group of orthologs #3101. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 S.scrofa:129

H2XLD2              	100.00%		F1SL20              	100.00%
                    	       		F1RNN9              	6.21%
Bootstrap support for H2XLD2 as seed ortholog is 82%.
Bootstrap support for F1SL20 as seed ortholog is 99%.

Group of orthologs #3102. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:162

F6Z9G9              	100.00%		F1RLQ4              	100.00%
Bootstrap support for F6Z9G9 as seed ortholog is 99%.
Bootstrap support for F1RLQ4 as seed ortholog is 100%.

Group of orthologs #3103. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.scrofa:243

F6PP06              	100.00%		F1SV19              	100.00%
Bootstrap support for F6PP06 as seed ortholog is 100%.
Bootstrap support for F1SV19 as seed ortholog is 100%.

Group of orthologs #3104. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.scrofa:243

F6UAY9              	100.00%		F1STY0              	100.00%
Bootstrap support for F6UAY9 as seed ortholog is 100%.
Bootstrap support for F1STY0 as seed ortholog is 100%.

Group of orthologs #3105. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.scrofa:243

F6TQG1              	100.00%		I3LHX1              	100.00%
Bootstrap support for F6TQG1 as seed ortholog is 100%.
Bootstrap support for I3LHX1 as seed ortholog is 100%.

Group of orthologs #3106. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.scrofa:243

F6ZN60              	100.00%		I3L5E2              	100.00%
Bootstrap support for F6ZN60 as seed ortholog is 100%.
Bootstrap support for I3L5E2 as seed ortholog is 100%.

Group of orthologs #3107. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.scrofa:196

F6TXW3              	100.00%		P63053              	100.00%
Bootstrap support for F6TXW3 as seed ortholog is 100%.
Bootstrap support for P63053 as seed ortholog is 100%.

Group of orthologs #3108. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 S.scrofa:243

H2XT58              	100.00%		I3LQZ4              	100.00%
Bootstrap support for H2XT58 as seed ortholog is 100%.
Bootstrap support for I3LQZ4 as seed ortholog is 100%.

Group of orthologs #3109. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 S.scrofa:242

H2XR37              	100.00%		F1S536              	100.00%
                    	       		I3LSB2              	8.68%
                    	       		F1RS08              	8.05%
                    	       		F1SCM8              	7.14%
Bootstrap support for H2XR37 as seed ortholog is 100%.
Bootstrap support for F1S536 as seed ortholog is 100%.

Group of orthologs #3110. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 S.scrofa:242

F6Q3E6              	100.00%		F1RUF2              	100.00%
Bootstrap support for F6Q3E6 as seed ortholog is 100%.
Bootstrap support for F1RUF2 as seed ortholog is 100%.

Group of orthologs #3111. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 S.scrofa:242

F6SNU1              	100.00%		F1RTJ9              	100.00%
Bootstrap support for F6SNU1 as seed ortholog is 100%.
Bootstrap support for F1RTJ9 as seed ortholog is 100%.

Group of orthologs #3112. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 S.scrofa:100

F7A934              	100.00%		F1RJF7              	100.00%
Bootstrap support for F7A934 as seed ortholog is 99%.
Bootstrap support for F1RJF7 as seed ortholog is 99%.

Group of orthologs #3113. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 S.scrofa:242

F6WPK3              	100.00%		F1S7W2              	100.00%
Bootstrap support for F6WPK3 as seed ortholog is 100%.
Bootstrap support for F1S7W2 as seed ortholog is 100%.

Group of orthologs #3114. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 S.scrofa:83

H2XKK7              	100.00%		F1S9K7              	100.00%
Bootstrap support for H2XKK7 as seed ortholog is 100%.
Bootstrap support for F1S9K7 as seed ortholog is 98%.

Group of orthologs #3115. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 S.scrofa:242

H2XPV5              	100.00%		F1SQJ3              	100.00%
Bootstrap support for H2XPV5 as seed ortholog is 100%.
Bootstrap support for F1SQJ3 as seed ortholog is 100%.

Group of orthologs #3116. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 S.scrofa:125

F6UNM5              	100.00%		F1SFQ4              	100.00%
                    	       		I3LEC2              	65.20%
                    	       		I3LRN5              	23.57%
                    	       		I3LRF8              	9.47%
Bootstrap support for F6UNM5 as seed ortholog is 100%.
Bootstrap support for F1SFQ4 as seed ortholog is 99%.

Group of orthologs #3117. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 S.scrofa:241

F7A7R4              	100.00%		D0G0C1              	100.00%
F6Z6W8              	15.44%		
Bootstrap support for F7A7R4 as seed ortholog is 100%.
Bootstrap support for D0G0C1 as seed ortholog is 100%.

Group of orthologs #3118. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 S.scrofa:241

F6SY22              	100.00%		F1RID8              	100.00%
Bootstrap support for F6SY22 as seed ortholog is 100%.
Bootstrap support for F1RID8 as seed ortholog is 100%.

Group of orthologs #3119. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 S.scrofa:108

F6TYS5              	100.00%		F2Z542              	100.00%
Bootstrap support for F6TYS5 as seed ortholog is 100%.
Bootstrap support for F2Z542 as seed ortholog is 100%.

Group of orthologs #3120. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 S.scrofa:241

H2Y0N2              	100.00%		F1RLM7              	100.00%
Bootstrap support for H2Y0N2 as seed ortholog is 100%.
Bootstrap support for F1RLM7 as seed ortholog is 100%.

Group of orthologs #3121. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 S.scrofa:241

F6QPL4              	100.00%		I3LVM9              	100.00%
Bootstrap support for F6QPL4 as seed ortholog is 100%.
Bootstrap support for I3LVM9 as seed ortholog is 100%.

Group of orthologs #3122. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 S.scrofa:116

F6ZDT1              	100.00%		I3L751              	100.00%
Bootstrap support for F6ZDT1 as seed ortholog is 100%.
Bootstrap support for I3L751 as seed ortholog is 99%.

Group of orthologs #3123. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 S.scrofa:241

F6XWF2              	100.00%		K7GSC4              	100.00%
Bootstrap support for F6XWF2 as seed ortholog is 100%.
Bootstrap support for K7GSC4 as seed ortholog is 100%.

Group of orthologs #3124. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 S.scrofa:100

H2Y061              	100.00%		I3LJW3              	100.00%
Bootstrap support for H2Y061 as seed ortholog is 100%.
Bootstrap support for I3LJW3 as seed ortholog is 99%.

Group of orthologs #3125. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 S.scrofa:44

F6TMZ9              	100.00%		F1S1I3              	100.00%
                    	       		I3LAP2              	14.68%
                    	       		F1S0N4              	14.42%
                    	       		F1SJG8              	10.45%
                    	       		I3LUF2              	9.39%
                    	       		I3LUN7              	8.20%
                    	       		A5GFZ3              	6.35%
Bootstrap support for F6TMZ9 as seed ortholog is 84%.
Bootstrap support for F1S1I3 as seed ortholog is 86%.

Group of orthologs #3126. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.scrofa:71

F7BHL3              	100.00%		F1SRS2              	100.00%
F6UWG2              	6.83%		C6L245              	71.11%
F6WT44              	6.83%		
Bootstrap support for F7BHL3 as seed ortholog is 95%.
Bootstrap support for F1SRS2 as seed ortholog is 98%.

Group of orthologs #3127. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 S.scrofa:48

F6WP72              	100.00%		I3L7A4              	100.00%
                    	       		F1S570              	49.57%
                    	       		I3LHF9              	31.90%
Bootstrap support for F6WP72 as seed ortholog is 100%.
Bootstrap support for I3L7A4 as seed ortholog is 94%.

Group of orthologs #3128. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:127

F6XU21              	100.00%		I3L8F0              	100.00%
                    	       		F1SIM8              	45.96%
                    	       		F1S362              	34.43%
Bootstrap support for F6XU21 as seed ortholog is 99%.
Bootstrap support for I3L8F0 as seed ortholog is 99%.

Group of orthologs #3129. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 S.scrofa:33

F7BBQ5              	100.00%		Q2EN76              	100.00%
F6YB01              	9.38%		F6PVJ7              	56.94%
Bootstrap support for F7BBQ5 as seed ortholog is 100%.
Bootstrap support for Q2EN76 as seed ortholog is 96%.

Group of orthologs #3130. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:240

F6X6I9              	100.00%		F1S175              	100.00%
F6WKB1              	14.29%		
Bootstrap support for F6X6I9 as seed ortholog is 74%.
Alternative seed ortholog is F6WUV8 (26 bits away from this cluster)
Bootstrap support for F1S175 as seed ortholog is 100%.

Group of orthologs #3131. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 S.scrofa:240

H2XVZ6              	100.00%		F1RSZ1              	100.00%
                    	       		I3LMF9              	36.82%
Bootstrap support for H2XVZ6 as seed ortholog is 100%.
Bootstrap support for F1RSZ1 as seed ortholog is 100%.

Group of orthologs #3132. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:184

F6WHM9              	100.00%		I3L9W7              	100.00%
                    	       		F1SPT3              	20.29%
Bootstrap support for F6WHM9 as seed ortholog is 99%.
Bootstrap support for I3L9W7 as seed ortholog is 100%.

Group of orthologs #3133. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 S.scrofa:240

H2XMJ7              	100.00%		I3LMK3              	100.00%
                    	       		I3LIY2              	98.24%
Bootstrap support for H2XMJ7 as seed ortholog is 100%.
Bootstrap support for I3LMK3 as seed ortholog is 100%.

Group of orthologs #3134. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 S.scrofa:240

F6QD73              	100.00%		F1RFT2              	100.00%
Bootstrap support for F6QD73 as seed ortholog is 100%.
Bootstrap support for F1RFT2 as seed ortholog is 100%.

Group of orthologs #3135. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 S.scrofa:240

F6V437              	100.00%		D0G6R6              	100.00%
Bootstrap support for F6V437 as seed ortholog is 100%.
Bootstrap support for D0G6R6 as seed ortholog is 100%.

Group of orthologs #3136. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 S.scrofa:240

F6W7H5              	100.00%		A5GFW7              	100.00%
Bootstrap support for F6W7H5 as seed ortholog is 100%.
Bootstrap support for A5GFW7 as seed ortholog is 100%.

Group of orthologs #3137. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 S.scrofa:240

F6RD37              	100.00%		F1RYV2              	100.00%
Bootstrap support for F6RD37 as seed ortholog is 100%.
Bootstrap support for F1RYV2 as seed ortholog is 100%.

Group of orthologs #3138. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 S.scrofa:72

F6TZK8              	100.00%		F1RR64              	100.00%
Bootstrap support for F6TZK8 as seed ortholog is 100%.
Bootstrap support for F1RR64 as seed ortholog is 99%.

Group of orthologs #3139. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:240

F6Q8X5              	100.00%		F1SHW1              	100.00%
Bootstrap support for F6Q8X5 as seed ortholog is 99%.
Bootstrap support for F1SHW1 as seed ortholog is 100%.

Group of orthologs #3140. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 S.scrofa:240

F6PWJ2              	100.00%		F1SPY8              	100.00%
Bootstrap support for F6PWJ2 as seed ortholog is 100%.
Bootstrap support for F1SPY8 as seed ortholog is 100%.

Group of orthologs #3141. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 S.scrofa:239

H2XXH1              	100.00%		Q29201              	100.00%
                    	       		F1SP46              	78.85%
                    	       		F1SEG5              	71.15%
Bootstrap support for H2XXH1 as seed ortholog is 100%.
Bootstrap support for Q29201 as seed ortholog is 100%.

Group of orthologs #3142. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 S.scrofa:239

F6QJB5              	100.00%		F1RMH8              	100.00%
Bootstrap support for F6QJB5 as seed ortholog is 100%.
Bootstrap support for F1RMH8 as seed ortholog is 100%.

Group of orthologs #3143. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 S.scrofa:239

F6QZ12              	100.00%		F1SE47              	100.00%
Bootstrap support for F6QZ12 as seed ortholog is 100%.
Bootstrap support for F1SE47 as seed ortholog is 100%.

Group of orthologs #3144. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 S.scrofa:239

F6XS68              	100.00%		F1S7C6              	100.00%
Bootstrap support for F6XS68 as seed ortholog is 100%.
Bootstrap support for F1S7C6 as seed ortholog is 100%.

Group of orthologs #3145. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 S.scrofa:21

F6VV86              	100.00%		F1SLC3              	100.00%
Bootstrap support for F6VV86 as seed ortholog is 100%.
Bootstrap support for F1SLC3 as seed ortholog is 79%.

Group of orthologs #3146. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 S.scrofa:239

F7BMD5              	100.00%		F1SFF4              	100.00%
Bootstrap support for F7BMD5 as seed ortholog is 100%.
Bootstrap support for F1SFF4 as seed ortholog is 100%.

Group of orthologs #3147. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 S.scrofa:183

F6YDB9              	100.00%		F1SUV1              	100.00%
Bootstrap support for F6YDB9 as seed ortholog is 100%.
Bootstrap support for F1SUV1 as seed ortholog is 100%.

Group of orthologs #3148. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:48

Q8T893              	100.00%		F1RSE9              	100.00%
Bootstrap support for Q8T893 as seed ortholog is 100%.
Bootstrap support for F1RSE9 as seed ortholog is 95%.

Group of orthologs #3149. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 S.scrofa:239

F7AX45              	100.00%		I3LCB2              	100.00%
Bootstrap support for F7AX45 as seed ortholog is 100%.
Bootstrap support for I3LCB2 as seed ortholog is 100%.

Group of orthologs #3150. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 S.scrofa:239

F7B2L3              	100.00%		P62844              	100.00%
Bootstrap support for F7B2L3 as seed ortholog is 100%.
Bootstrap support for P62844 as seed ortholog is 100%.

Group of orthologs #3151. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 S.scrofa:239

Q3MQ22              	100.00%		Q3MQ04              	100.00%
Bootstrap support for Q3MQ22 as seed ortholog is 100%.
Bootstrap support for Q3MQ04 as seed ortholog is 100%.

Group of orthologs #3152. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 S.scrofa:238

Q4H3J7              	100.00%		F1SAU0              	100.00%
                    	       		F1SHK8              	31.00%
                    	       		F1RM41              	6.59%
Bootstrap support for Q4H3J7 as seed ortholog is 61%.
Alternative seed ortholog is H2Y3C0 (6 bits away from this cluster)
Bootstrap support for F1SAU0 as seed ortholog is 100%.

Group of orthologs #3153. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 S.scrofa:167

F6V9K6              	100.00%		F1S605              	100.00%
                    	       		F1SL35              	35.15%
Bootstrap support for F6V9K6 as seed ortholog is 83%.
Bootstrap support for F1S605 as seed ortholog is 100%.

Group of orthologs #3154. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 S.scrofa:238

F7AG43              	100.00%		F1SHR3              	100.00%
                    	       		F1S5M0              	46.97%
Bootstrap support for F7AG43 as seed ortholog is 100%.
Bootstrap support for F1SHR3 as seed ortholog is 100%.

Group of orthologs #3155. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 S.scrofa:238

F7BJ17              	100.00%		Q4Z8N7              	100.00%
                    	       		I3LHC7              	8.35%
Bootstrap support for F7BJ17 as seed ortholog is 100%.
Bootstrap support for Q4Z8N7 as seed ortholog is 100%.

Group of orthologs #3156. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 S.scrofa:238

F6TKE5              	100.00%		F1RWU8              	100.00%
Bootstrap support for F6TKE5 as seed ortholog is 100%.
Bootstrap support for F1RWU8 as seed ortholog is 100%.

Group of orthologs #3157. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 S.scrofa:238

F7A2I6              	100.00%		F1RH61              	100.00%
Bootstrap support for F7A2I6 as seed ortholog is 100%.
Bootstrap support for F1RH61 as seed ortholog is 100%.

Group of orthologs #3158. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 S.scrofa:238

F6ZWT9              	100.00%		F1SEQ5              	100.00%
Bootstrap support for F6ZWT9 as seed ortholog is 100%.
Bootstrap support for F1SEQ5 as seed ortholog is 100%.

Group of orthologs #3159. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 S.scrofa:238

F6WQI3              	100.00%		F1SU66              	100.00%
Bootstrap support for F6WQI3 as seed ortholog is 100%.
Bootstrap support for F1SU66 as seed ortholog is 100%.

Group of orthologs #3160. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.scrofa:59

F7AKT1              	100.00%		F2Z596              	100.00%
Bootstrap support for F7AKT1 as seed ortholog is 100%.
Bootstrap support for F2Z596 as seed ortholog is 99%.

Group of orthologs #3161. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 S.scrofa:82

F6VN10              	100.00%		P00571              	100.00%
Bootstrap support for F6VN10 as seed ortholog is 100%.
Bootstrap support for P00571 as seed ortholog is 99%.

Group of orthologs #3162. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 S.scrofa:238

Q8HIN2              	100.00%		O79874              	100.00%
Bootstrap support for Q8HIN2 as seed ortholog is 100%.
Bootstrap support for O79874 as seed ortholog is 100%.

Group of orthologs #3163. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.scrofa:237

F6ZP94              	100.00%		B1PK17              	100.00%
F7BBL3              	72.52%		
H2Y3S1              	29.26%		
Bootstrap support for F6ZP94 as seed ortholog is 100%.
Bootstrap support for B1PK17 as seed ortholog is 100%.

Group of orthologs #3164. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.scrofa:130

F7A3S4              	100.00%		F1RVB9              	100.00%
F6YQI1              	48.80%		
Bootstrap support for F7A3S4 as seed ortholog is 100%.
Bootstrap support for F1RVB9 as seed ortholog is 99%.

Group of orthologs #3165. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.scrofa:237

H2XJL7              	100.00%		F1RNB1              	100.00%
                    	       		F1RKZ7              	18.63%
Bootstrap support for H2XJL7 as seed ortholog is 100%.
Bootstrap support for F1RNB1 as seed ortholog is 100%.

Group of orthologs #3166. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.scrofa:38

F7AEF7              	100.00%		F1S3R3              	100.00%
                    	       		F1SBG4              	10.61%
Bootstrap support for F7AEF7 as seed ortholog is 99%.
Bootstrap support for F1S3R3 as seed ortholog is 83%.

Group of orthologs #3167. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:47

H2Y233              	100.00%		F2Z5Q9              	100.00%
                    	       		I3LIU9              	73.26%
Bootstrap support for H2Y233 as seed ortholog is 100%.
Bootstrap support for F2Z5Q9 as seed ortholog is 99%.

Group of orthologs #3168. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.scrofa:72

F6TA16              	100.00%		F1S5S7              	100.00%
Bootstrap support for F6TA16 as seed ortholog is 71%.
Alternative seed ortholog is F6YRX9 (19 bits away from this cluster)
Bootstrap support for F1S5S7 as seed ortholog is 98%.

Group of orthologs #3169. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.scrofa:237

F6PZ15              	100.00%		F1SG95              	100.00%
Bootstrap support for F6PZ15 as seed ortholog is 100%.
Bootstrap support for F1SG95 as seed ortholog is 100%.

Group of orthologs #3170. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.scrofa:237

F7ASV8              	100.00%		F1RQT4              	100.00%
Bootstrap support for F7ASV8 as seed ortholog is 100%.
Bootstrap support for F1RQT4 as seed ortholog is 100%.

Group of orthologs #3171. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.scrofa:237

F6X915              	100.00%		F1SDB6              	100.00%
Bootstrap support for F6X915 as seed ortholog is 100%.
Bootstrap support for F1SDB6 as seed ortholog is 100%.

Group of orthologs #3172. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.scrofa:116

F6RLX1              	100.00%		F2Z5P1              	100.00%
Bootstrap support for F6RLX1 as seed ortholog is 100%.
Bootstrap support for F2Z5P1 as seed ortholog is 100%.

Group of orthologs #3173. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.scrofa:237

F7AKQ9              	100.00%		F1SQ35              	100.00%
Bootstrap support for F7AKQ9 as seed ortholog is 96%.
Bootstrap support for F1SQ35 as seed ortholog is 100%.

Group of orthologs #3174. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.scrofa:237

H2XYD5              	100.00%		F1S181              	100.00%
Bootstrap support for H2XYD5 as seed ortholog is 100%.
Bootstrap support for F1S181 as seed ortholog is 100%.

Group of orthologs #3175. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.scrofa:237

F6RZU6              	100.00%		K7N7E9              	100.00%
Bootstrap support for F6RZU6 as seed ortholog is 100%.
Bootstrap support for K7N7E9 as seed ortholog is 100%.

Group of orthologs #3176. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 S.scrofa:237

H2XSB0              	100.00%		I3L5I0              	100.00%
Bootstrap support for H2XSB0 as seed ortholog is 100%.
Bootstrap support for I3L5I0 as seed ortholog is 100%.

Group of orthologs #3177. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 S.scrofa:236

F6VAC9              	100.00%		F1RWY7              	100.00%
F6U176              	11.05%		
Bootstrap support for F6VAC9 as seed ortholog is 100%.
Bootstrap support for F1RWY7 as seed ortholog is 100%.

Group of orthologs #3178. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 S.scrofa:236

F6PIQ0              	100.00%		F1RHH0              	100.00%
Bootstrap support for F6PIQ0 as seed ortholog is 100%.
Bootstrap support for F1RHH0 as seed ortholog is 100%.

Group of orthologs #3179. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 S.scrofa:236

F6VPT6              	100.00%		A5PEZ3              	100.00%
Bootstrap support for F6VPT6 as seed ortholog is 100%.
Bootstrap support for A5PEZ3 as seed ortholog is 100%.

Group of orthologs #3180. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 S.scrofa:236

F6WN20              	100.00%		F1S2I0              	100.00%
Bootstrap support for F6WN20 as seed ortholog is 100%.
Bootstrap support for F1S2I0 as seed ortholog is 100%.

Group of orthologs #3181. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.scrofa:154

F6TTC3              	100.00%		F1SI25              	100.00%
Bootstrap support for F6TTC3 as seed ortholog is 100%.
Bootstrap support for F1SI25 as seed ortholog is 100%.

Group of orthologs #3182. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 S.scrofa:184

F6TCF8              	100.00%		F1SSG1              	100.00%
Bootstrap support for F6TCF8 as seed ortholog is 100%.
Bootstrap support for F1SSG1 as seed ortholog is 100%.

Group of orthologs #3183. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 S.scrofa:236

F6YAL4              	100.00%		F1SQ17              	100.00%
Bootstrap support for F6YAL4 as seed ortholog is 100%.
Bootstrap support for F1SQ17 as seed ortholog is 100%.

Group of orthologs #3184. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 S.scrofa:236

F6YI57              	100.00%		F1SRB9              	100.00%
Bootstrap support for F6YI57 as seed ortholog is 100%.
Bootstrap support for F1SRB9 as seed ortholog is 100%.

Group of orthologs #3185. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 S.scrofa:236

F6XI97              	100.00%		I3LP29              	100.00%
Bootstrap support for F6XI97 as seed ortholog is 100%.
Bootstrap support for I3LP29 as seed ortholog is 100%.

Group of orthologs #3186. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 S.scrofa:38

Q4H342              	100.00%		F1S8W5              	100.00%
Bootstrap support for Q4H342 as seed ortholog is 100%.
Bootstrap support for F1S8W5 as seed ortholog is 85%.

Group of orthologs #3187. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 S.scrofa:236

Q8SSZ0              	100.00%		F1SMV2              	100.00%
Bootstrap support for Q8SSZ0 as seed ortholog is 100%.
Bootstrap support for F1SMV2 as seed ortholog is 100%.

Group of orthologs #3188. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:90

F6V8I4              	100.00%		F1SU60              	100.00%
                    	       		F1S8T5              	45.83%
                    	       		F1RRX7              	40.48%
                    	       		I3LMG1              	26.79%
Bootstrap support for F6V8I4 as seed ortholog is 99%.
Bootstrap support for F1SU60 as seed ortholog is 99%.

Group of orthologs #3189. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:148

F6U8Q9              	100.00%		F1RUH2              	100.00%
                    	       		I3L5U1              	16.31%
Bootstrap support for F6U8Q9 as seed ortholog is 100%.
Bootstrap support for F1RUH2 as seed ortholog is 99%.

Group of orthologs #3190. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:132

H2Y2K0              	100.00%		F1S575              	100.00%
                    	       		F1S0U7              	27.61%
Bootstrap support for H2Y2K0 as seed ortholog is 100%.
Bootstrap support for F1S575 as seed ortholog is 99%.

Group of orthologs #3191. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:235

F6TSS8              	100.00%		F1RQG3              	100.00%
Bootstrap support for F6TSS8 as seed ortholog is 100%.
Bootstrap support for F1RQG3 as seed ortholog is 100%.

Group of orthologs #3192. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:235

F6TZC4              	100.00%		F1RUX7              	100.00%
Bootstrap support for F6TZC4 as seed ortholog is 100%.
Bootstrap support for F1RUX7 as seed ortholog is 100%.

Group of orthologs #3193. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:235

F6PMD1              	100.00%		F1SE87              	100.00%
Bootstrap support for F6PMD1 as seed ortholog is 100%.
Bootstrap support for F1SE87 as seed ortholog is 100%.

Group of orthologs #3194. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:235

F6UA87              	100.00%		F1S3B0              	100.00%
Bootstrap support for F6UA87 as seed ortholog is 100%.
Bootstrap support for F1S3B0 as seed ortholog is 100%.

Group of orthologs #3195. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:235

F6ZPU3              	100.00%		F1SCJ1              	100.00%
Bootstrap support for F6ZPU3 as seed ortholog is 100%.
Bootstrap support for F1SCJ1 as seed ortholog is 100%.

Group of orthologs #3196. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:235

F6Y0Q5              	100.00%		F1SVB1              	100.00%
Bootstrap support for F6Y0Q5 as seed ortholog is 100%.
Bootstrap support for F1SVB1 as seed ortholog is 100%.

Group of orthologs #3197. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:235

F6WB92              	100.00%		I3LFW4              	100.00%
Bootstrap support for F6WB92 as seed ortholog is 100%.
Bootstrap support for I3LFW4 as seed ortholog is 100%.

Group of orthologs #3198. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:235

F6ZE91              	100.00%		I3LDM7              	100.00%
Bootstrap support for F6ZE91 as seed ortholog is 100%.
Bootstrap support for I3LDM7 as seed ortholog is 100%.

Group of orthologs #3199. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:235

F7BFF4              	100.00%		I3LBK1              	100.00%
Bootstrap support for F7BFF4 as seed ortholog is 100%.
Bootstrap support for I3LBK1 as seed ortholog is 100%.

Group of orthologs #3200. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:235

F7BQ69              	100.00%		I3LRA4              	100.00%
Bootstrap support for F7BQ69 as seed ortholog is 100%.
Bootstrap support for I3LRA4 as seed ortholog is 100%.

Group of orthologs #3201. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:235

H2XTW6              	100.00%		Q9BEC7              	100.00%
Bootstrap support for H2XTW6 as seed ortholog is 100%.
Bootstrap support for Q9BEC7 as seed ortholog is 100%.

Group of orthologs #3202. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 S.scrofa:235

H2Y184              	100.00%		Q8HXL4              	100.00%
Bootstrap support for H2Y184 as seed ortholog is 100%.
Bootstrap support for Q8HXL4 as seed ortholog is 100%.

Group of orthologs #3203. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 S.scrofa:234

F7BPH5              	100.00%		P79388              	100.00%
                    	       		Q9XSH0              	46.95%
                    	       		F1STK4              	13.11%
Bootstrap support for F7BPH5 as seed ortholog is 91%.
Bootstrap support for P79388 as seed ortholog is 100%.

Group of orthologs #3204. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 S.scrofa:234

F6UU89              	100.00%		F1STQ2              	100.00%
                    	       		I3LKF7              	39.25%
Bootstrap support for F6UU89 as seed ortholog is 100%.
Bootstrap support for F1STQ2 as seed ortholog is 100%.

Group of orthologs #3205. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 S.scrofa:86

F6QSC7              	100.00%		Q06AB3              	100.00%
                    	       		Q6SEG5              	8.90%
Bootstrap support for F6QSC7 as seed ortholog is 100%.
Bootstrap support for Q06AB3 as seed ortholog is 99%.

Group of orthologs #3206. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 S.scrofa:234

H2XM38              	100.00%		I3LD64              	100.00%
                    	       		I3L7U5              	91.15%
Bootstrap support for H2XM38 as seed ortholog is 100%.
Bootstrap support for I3LD64 as seed ortholog is 100%.

Group of orthologs #3207. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 S.scrofa:234

F6SCR3              	100.00%		F1RKF4              	100.00%
Bootstrap support for F6SCR3 as seed ortholog is 100%.
Bootstrap support for F1RKF4 as seed ortholog is 100%.

Group of orthologs #3208. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 S.scrofa:234

F6UUF9              	100.00%		F1SMY1              	100.00%
Bootstrap support for F6UUF9 as seed ortholog is 100%.
Bootstrap support for F1SMY1 as seed ortholog is 100%.

Group of orthologs #3209. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 S.scrofa:60

F6ZX46              	100.00%		F1SNY8              	100.00%
Bootstrap support for F6ZX46 as seed ortholog is 100%.
Bootstrap support for F1SNY8 as seed ortholog is 99%.

Group of orthologs #3210. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 S.scrofa:234

H2XJN3              	100.00%		F2Z5Q7              	100.00%
Bootstrap support for H2XJN3 as seed ortholog is 100%.
Bootstrap support for F2Z5Q7 as seed ortholog is 100%.

Group of orthologs #3211. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 S.scrofa:234

H2XZ76              	100.00%		F1SAR9              	100.00%
Bootstrap support for H2XZ76 as seed ortholog is 100%.
Bootstrap support for F1SAR9 as seed ortholog is 100%.

Group of orthologs #3212. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 S.scrofa:233

Q70W02              	100.00%		O18896              	100.00%
                    	       		A5A763              	30.14%
                    	       		I3LI81              	30.14%
Bootstrap support for Q70W02 as seed ortholog is 100%.
Bootstrap support for O18896 as seed ortholog is 100%.

Group of orthologs #3213. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 S.scrofa:233

F6SJE3              	100.00%		F1SUW3              	100.00%
                    	       		F1SMT0              	25.33%
Bootstrap support for F6SJE3 as seed ortholog is 100%.
Bootstrap support for F1SUW3 as seed ortholog is 100%.

Group of orthologs #3214. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.scrofa:166

H2XP52              	100.00%		I3LPY0              	100.00%
F6QZM4              	20.30%		
Bootstrap support for H2XP52 as seed ortholog is 100%.
Bootstrap support for I3LPY0 as seed ortholog is 100%.

Group of orthologs #3215. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 S.scrofa:233

F6ZJ82              	100.00%		F1RNS9              	100.00%
Bootstrap support for F6ZJ82 as seed ortholog is 100%.
Bootstrap support for F1RNS9 as seed ortholog is 100%.

Group of orthologs #3216. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:233

F6RXW9              	100.00%		F1SUH8              	100.00%
Bootstrap support for F6RXW9 as seed ortholog is 100%.
Bootstrap support for F1SUH8 as seed ortholog is 100%.

Group of orthologs #3217. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 S.scrofa:233

F6WTN6              	100.00%		F1SHM2              	100.00%
Bootstrap support for F6WTN6 as seed ortholog is 100%.
Bootstrap support for F1SHM2 as seed ortholog is 100%.

Group of orthologs #3218. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.scrofa:233

F6SKG8              	100.00%		I3LJB4              	100.00%
Bootstrap support for F6SKG8 as seed ortholog is 98%.
Bootstrap support for I3LJB4 as seed ortholog is 100%.

Group of orthologs #3219. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 S.scrofa:233

F7ASZ2              	100.00%		I3LFQ9              	100.00%
Bootstrap support for F7ASZ2 as seed ortholog is 100%.
Bootstrap support for I3LFQ9 as seed ortholog is 100%.

Group of orthologs #3220. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:100

F6X8W4              	100.00%		F1RRS6              	100.00%
                    	       		I3L9Q3              	53.29%
Bootstrap support for F6X8W4 as seed ortholog is 99%.
Bootstrap support for F1RRS6 as seed ortholog is 99%.

Group of orthologs #3221. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:232

F6VHM6              	100.00%		F1S1X1              	100.00%
                    	       		I3L970              	61.75%
Bootstrap support for F6VHM6 as seed ortholog is 100%.
Bootstrap support for F1S1X1 as seed ortholog is 100%.

Group of orthologs #3222. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.scrofa:106

F6ZMB2              	100.00%		F1RMD0              	100.00%
                    	       		F1RMC9              	15.33%
Bootstrap support for F6ZMB2 as seed ortholog is 96%.
Bootstrap support for F1RMD0 as seed ortholog is 99%.

Group of orthologs #3223. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:232

F6SNK4              	100.00%		F1SHP6              	100.00%
                    	       		I3LHX5              	58.30%
Bootstrap support for F6SNK4 as seed ortholog is 100%.
Bootstrap support for F1SHP6 as seed ortholog is 100%.

Group of orthologs #3224. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:174

F6WTB4              	100.00%		F1S548              	100.00%
                    	       		I3LDE4              	82.42%
Bootstrap support for F6WTB4 as seed ortholog is 100%.
Bootstrap support for F1S548 as seed ortholog is 100%.

Group of orthologs #3225. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:232

F6YBU7              	100.00%		F1SQN5              	100.00%
                    	       		I3LAQ2              	96.97%
Bootstrap support for F6YBU7 as seed ortholog is 100%.
Bootstrap support for F1SQN5 as seed ortholog is 100%.

Group of orthologs #3226. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:67

F6Z235              	100.00%		I3L7Y1              	100.00%
                    	       		F2Z5N5              	94.83%
Bootstrap support for F6Z235 as seed ortholog is 100%.
Bootstrap support for I3L7Y1 as seed ortholog is 99%.

Group of orthologs #3227. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:232

H2XNI2              	100.00%		F1SV97              	100.00%
                    	       		I3L887              	19.83%
Bootstrap support for H2XNI2 as seed ortholog is 100%.
Bootstrap support for F1SV97 as seed ortholog is 100%.

Group of orthologs #3228. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:149

F6TMT5              	100.00%		F1RGQ5              	100.00%
Bootstrap support for F6TMT5 as seed ortholog is 99%.
Bootstrap support for F1RGQ5 as seed ortholog is 100%.

Group of orthologs #3229. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:232

F6Z599              	100.00%		F1RLM4              	100.00%
Bootstrap support for F6Z599 as seed ortholog is 100%.
Bootstrap support for F1RLM4 as seed ortholog is 100%.

Group of orthologs #3230. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:136

F6U6C0              	100.00%		F1S6H1              	100.00%
Bootstrap support for F6U6C0 as seed ortholog is 100%.
Bootstrap support for F1S6H1 as seed ortholog is 100%.

Group of orthologs #3231. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:232

F6VDY1              	100.00%		F1S6B0              	100.00%
Bootstrap support for F6VDY1 as seed ortholog is 100%.
Bootstrap support for F1S6B0 as seed ortholog is 100%.

Group of orthologs #3232. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:232

F6TL19              	100.00%		F1SQF9              	100.00%
Bootstrap support for F6TL19 as seed ortholog is 100%.
Bootstrap support for F1SQF9 as seed ortholog is 100%.

Group of orthologs #3233. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:141

Q1RL32              	100.00%		F1RNZ0              	100.00%
Bootstrap support for Q1RL32 as seed ortholog is 100%.
Bootstrap support for F1RNZ0 as seed ortholog is 99%.

Group of orthologs #3234. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:7

F6ZUK5              	100.00%		I3L8X6              	100.00%
Bootstrap support for F6ZUK5 as seed ortholog is 100%.
Bootstrap support for I3L8X6 as seed ortholog is 62%.
Alternative seed ortholog is F1RXZ6 (7 bits away from this cluster)

Group of orthologs #3235. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:232

F6SPW4              	100.00%		P79385              	100.00%
Bootstrap support for F6SPW4 as seed ortholog is 100%.
Bootstrap support for P79385 as seed ortholog is 100%.

Group of orthologs #3236. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:165

F6V2G1              	100.00%		I3LUZ7              	100.00%
Bootstrap support for F6V2G1 as seed ortholog is 99%.
Bootstrap support for I3LUZ7 as seed ortholog is 100%.

Group of orthologs #3237. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 S.scrofa:232

F6XWU5              	100.00%		I3LTZ8              	100.00%
Bootstrap support for F6XWU5 as seed ortholog is 100%.
Bootstrap support for I3LTZ8 as seed ortholog is 100%.

Group of orthologs #3238. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.scrofa:97

F6VJJ2              	100.00%		F1RW99              	100.00%
Bootstrap support for F6VJJ2 as seed ortholog is 66%.
Alternative seed ortholog is F6ULW5 (19 bits away from this cluster)
Bootstrap support for F1RW99 as seed ortholog is 99%.

Group of orthologs #3239. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:139

F6YVE9              	100.00%		F1RXI6              	100.00%
Bootstrap support for F6YVE9 as seed ortholog is 100%.
Bootstrap support for F1RXI6 as seed ortholog is 100%.

Group of orthologs #3240. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 S.scrofa:231

F6UKQ2              	100.00%		F1SDX3              	100.00%
Bootstrap support for F6UKQ2 as seed ortholog is 100%.
Bootstrap support for F1SDX3 as seed ortholog is 100%.

Group of orthologs #3241. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 S.scrofa:231

F6ZEU6              	100.00%		F1RXT8              	100.00%
Bootstrap support for F6ZEU6 as seed ortholog is 100%.
Bootstrap support for F1RXT8 as seed ortholog is 100%.

Group of orthologs #3242. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 S.scrofa:42

H2XK36              	100.00%		F1S7K5              	100.00%
Bootstrap support for H2XK36 as seed ortholog is 100%.
Bootstrap support for F1S7K5 as seed ortholog is 98%.

Group of orthologs #3243. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 S.scrofa:65

H2XNU9              	100.00%		F1SK35              	100.00%
Bootstrap support for H2XNU9 as seed ortholog is 87%.
Bootstrap support for F1SK35 as seed ortholog is 98%.

Group of orthologs #3244. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:166

F6ZRL9              	100.00%		B8XH67              	100.00%
                    	       		F1RFB4              	20.32%
Bootstrap support for F6ZRL9 as seed ortholog is 99%.
Bootstrap support for B8XH67 as seed ortholog is 99%.

Group of orthologs #3245. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.scrofa:230

F6Y7F7              	100.00%		I3L692              	100.00%
                    	       		F1S589              	17.18%
Bootstrap support for F6Y7F7 as seed ortholog is 100%.
Bootstrap support for I3L692 as seed ortholog is 100%.

Group of orthologs #3246. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.scrofa:54

F6Z0V4              	100.00%		F2Z5Q3              	100.00%
                    	       		I3LPD5              	64.67%
Bootstrap support for F6Z0V4 as seed ortholog is 100%.
Bootstrap support for F2Z5Q3 as seed ortholog is 98%.

Group of orthologs #3247. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.scrofa:230

Q4H2W4              	100.00%		I3LCN6              	100.00%
                    	       		I3L6V3              	20.24%
Bootstrap support for Q4H2W4 as seed ortholog is 100%.
Bootstrap support for I3LCN6 as seed ortholog is 100%.

Group of orthologs #3248. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.scrofa:230

F7AWW1              	100.00%		F1RRR1              	100.00%
Bootstrap support for F7AWW1 as seed ortholog is 100%.
Bootstrap support for F1RRR1 as seed ortholog is 100%.

Group of orthologs #3249. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.scrofa:230

F6S2C6              	100.00%		F2Z522              	100.00%
Bootstrap support for F6S2C6 as seed ortholog is 100%.
Bootstrap support for F2Z522 as seed ortholog is 100%.

Group of orthologs #3250. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.scrofa:230

F7ASB0              	100.00%		F1SJV0              	100.00%
Bootstrap support for F7ASB0 as seed ortholog is 100%.
Bootstrap support for F1SJV0 as seed ortholog is 100%.

Group of orthologs #3251. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.scrofa:230

F6ZZC3              	100.00%		F1SPG3              	100.00%
Bootstrap support for F6ZZC3 as seed ortholog is 100%.
Bootstrap support for F1SPG3 as seed ortholog is 100%.

Group of orthologs #3252. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.scrofa:77

F6UGM6              	100.00%		I3LFL4              	100.00%
Bootstrap support for F6UGM6 as seed ortholog is 100%.
Bootstrap support for I3LFL4 as seed ortholog is 99%.

Group of orthologs #3253. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.scrofa:230

F6YLE1              	100.00%		I3LKB2              	100.00%
Bootstrap support for F6YLE1 as seed ortholog is 100%.
Bootstrap support for I3LKB2 as seed ortholog is 100%.

Group of orthologs #3254. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 S.scrofa:35

F7AAH4              	100.00%		Q95245              	100.00%
Bootstrap support for F7AAH4 as seed ortholog is 100%.
Bootstrap support for Q95245 as seed ortholog is 88%.

Group of orthologs #3255. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 S.scrofa:70

F6S9P0              	100.00%		F1S5S0              	100.00%
F6S9Q0              	100.00%		A4GVD1              	100.00%
F6T0Z3              	18.65%		
Bootstrap support for F6S9P0 as seed ortholog is 99%.
Bootstrap support for F6S9Q0 as seed ortholog is 99%.
Bootstrap support for F1S5S0 as seed ortholog is 80%.
Bootstrap support for A4GVD1 as seed ortholog is 88%.

Group of orthologs #3256. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 S.scrofa:229

H2XUA2              	100.00%		F1RRV6              	100.00%
                    	       		I3LSD8              	36.36%
                    	       		F1S479              	30.44%
                    	       		I3LFI3              	24.95%
Bootstrap support for H2XUA2 as seed ortholog is 100%.
Bootstrap support for F1RRV6 as seed ortholog is 100%.

Group of orthologs #3257. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:44

H2Y054              	100.00%		F1RFB0              	100.00%
                    	       		I3LSL6              	53.33%
                    	       		F2Z570              	25.26%
Bootstrap support for H2Y054 as seed ortholog is 98%.
Bootstrap support for F1RFB0 as seed ortholog is 95%.

Group of orthologs #3258. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 S.scrofa:229

F6UIS2              	100.00%		F1S8A2              	100.00%
                    	       		I3L5K6              	22.72%
Bootstrap support for F6UIS2 as seed ortholog is 100%.
Bootstrap support for F1S8A2 as seed ortholog is 100%.

Group of orthologs #3259. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 S.scrofa:229

F6RR57              	100.00%		I3LAS0              	100.00%
                    	       		I3LTN7              	93.55%
Bootstrap support for F6RR57 as seed ortholog is 100%.
Bootstrap support for I3LAS0 as seed ortholog is 100%.

Group of orthologs #3260. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.scrofa:95

H2XRG0              	100.00%		F1RYZ1              	100.00%
                    	       		F1SKA6              	12.33%
Bootstrap support for H2XRG0 as seed ortholog is 99%.
Bootstrap support for F1RYZ1 as seed ortholog is 99%.

Group of orthologs #3261. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 S.scrofa:229

F6QIV0              	100.00%		F1RQV4              	100.00%
Bootstrap support for F6QIV0 as seed ortholog is 100%.
Bootstrap support for F1RQV4 as seed ortholog is 100%.

Group of orthologs #3262. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 S.scrofa:229

F6SVP7              	100.00%		F1SGY7              	100.00%
Bootstrap support for F6SVP7 as seed ortholog is 100%.
Bootstrap support for F1SGY7 as seed ortholog is 100%.

Group of orthologs #3263. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.scrofa:229

F6U189              	100.00%		F1SLR0              	100.00%
Bootstrap support for F6U189 as seed ortholog is 99%.
Bootstrap support for F1SLR0 as seed ortholog is 100%.

Group of orthologs #3264. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.scrofa:228

F6W804              	100.00%		B7U2H0              	100.00%
F6Q9F4              	7.16%		
Bootstrap support for F6W804 as seed ortholog is 100%.
Bootstrap support for B7U2H0 as seed ortholog is 100%.

Group of orthologs #3265. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.scrofa:228

H2XMF7              	100.00%		F1RUH1              	100.00%
                    	       		F1S4Z6              	8.49%
Bootstrap support for H2XMF7 as seed ortholog is 100%.
Bootstrap support for F1RUH1 as seed ortholog is 100%.

Group of orthologs #3266. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.scrofa:228

F6SP08              	100.00%		F2Z5D7              	100.00%
                    	       		F1RPK9              	45.16%
Bootstrap support for F6SP08 as seed ortholog is 100%.
Bootstrap support for F2Z5D7 as seed ortholog is 100%.

Group of orthologs #3267. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.scrofa:117

F6UHS2              	100.00%		Q29561              	100.00%
                    	       		F1S6D8              	70.41%
Bootstrap support for F6UHS2 as seed ortholog is 100%.
Bootstrap support for Q29561 as seed ortholog is 99%.

Group of orthologs #3268. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.scrofa:228

F6T6F5              	100.00%		B5APU8              	100.00%
Bootstrap support for F6T6F5 as seed ortholog is 100%.
Bootstrap support for B5APU8 as seed ortholog is 100%.

Group of orthologs #3269. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.scrofa:228

F6SVM4              	100.00%		F1RI41              	100.00%
Bootstrap support for F6SVM4 as seed ortholog is 100%.
Bootstrap support for F1RI41 as seed ortholog is 100%.

Group of orthologs #3270. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 S.scrofa:24

F6XY36              	100.00%		F1S0R8              	100.00%
Bootstrap support for F6XY36 as seed ortholog is 80%.
Bootstrap support for F1S0R8 as seed ortholog is 77%.

Group of orthologs #3271. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.scrofa:228

F6TNT4              	100.00%		F1SIT3              	100.00%
Bootstrap support for F6TNT4 as seed ortholog is 99%.
Bootstrap support for F1SIT3 as seed ortholog is 100%.

Group of orthologs #3272. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 S.scrofa:33

F6S569              	100.00%		F2Z5R2              	100.00%
Bootstrap support for F6S569 as seed ortholog is 100%.
Bootstrap support for F2Z5R2 as seed ortholog is 93%.

Group of orthologs #3273. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.scrofa:228

F7ALA2              	100.00%		F1S7T5              	100.00%
Bootstrap support for F7ALA2 as seed ortholog is 100%.
Bootstrap support for F1S7T5 as seed ortholog is 100%.

Group of orthologs #3274. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.scrofa:228

F6VQB3              	100.00%		F1SQC6              	100.00%
Bootstrap support for F6VQB3 as seed ortholog is 100%.
Bootstrap support for F1SQC6 as seed ortholog is 100%.

Group of orthologs #3275. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.scrofa:228

F6YCI4              	100.00%		I3LBQ6              	100.00%
Bootstrap support for F6YCI4 as seed ortholog is 100%.
Bootstrap support for I3LBQ6 as seed ortholog is 100%.

Group of orthologs #3276. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:151

H2XXB3              	100.00%		F1S8L8              	100.00%
Bootstrap support for H2XXB3 as seed ortholog is 100%.
Bootstrap support for F1S8L8 as seed ortholog is 100%.

Group of orthologs #3277. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 S.scrofa:228

H2Y2D1              	100.00%		F1SID0              	100.00%
Bootstrap support for H2Y2D1 as seed ortholog is 100%.
Bootstrap support for F1SID0 as seed ortholog is 100%.

Group of orthologs #3278. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 S.scrofa:227

F6RMW3              	100.00%		F1RQS2              	100.00%
                    	       		F1RZR9              	32.86%
Bootstrap support for F6RMW3 as seed ortholog is 100%.
Bootstrap support for F1RQS2 as seed ortholog is 100%.

Group of orthologs #3279. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:68

H2XJR2              	100.00%		F1RW28              	100.00%
                    	       		I3L5K3              	38.48%
Bootstrap support for H2XJR2 as seed ortholog is 100%.
Bootstrap support for F1RW28 as seed ortholog is 98%.

Group of orthologs #3280. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 S.scrofa:63

F7A1W8              	100.00%		F1RLE5              	100.00%
Bootstrap support for F7A1W8 as seed ortholog is 100%.
Bootstrap support for F1RLE5 as seed ortholog is 99%.

Group of orthologs #3281. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.scrofa:35

F6TWK8              	100.00%		F1SRF1              	100.00%
Bootstrap support for F6TWK8 as seed ortholog is 90%.
Bootstrap support for F1SRF1 as seed ortholog is 70%.
Alternative seed ortholog is F1RWC7 (35 bits away from this cluster)

Group of orthologs #3282. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 S.scrofa:227

F6QBK7              	100.00%		I3LK70              	100.00%
Bootstrap support for F6QBK7 as seed ortholog is 100%.
Bootstrap support for I3LK70 as seed ortholog is 100%.

Group of orthologs #3283. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 S.scrofa:226

F6ZJ18              	100.00%		F1RTE1              	100.00%
                    	       		F1SIQ5              	26.06%
                    	       		F1RNM8              	19.83%
Bootstrap support for F6ZJ18 as seed ortholog is 100%.
Bootstrap support for F1RTE1 as seed ortholog is 100%.

Group of orthologs #3284. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 S.scrofa:226

F6WH38              	100.00%		I3LTY9              	100.00%
                    	       		F1RG20              	40.14%
                    	       		F1S5Q2              	25.31%
Bootstrap support for F6WH38 as seed ortholog is 100%.
Bootstrap support for I3LTY9 as seed ortholog is 100%.

Group of orthologs #3285. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 S.scrofa:226

F6U6R8              	100.00%		F1RY41              	100.00%
                    	       		F1S5V2              	10.00%
Bootstrap support for F6U6R8 as seed ortholog is 100%.
Bootstrap support for F1RY41 as seed ortholog is 100%.

Group of orthologs #3286. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 S.scrofa:226

F6VE75              	100.00%		I3LIF4              	100.00%
                    	       		F1S8Y1              	18.57%
Bootstrap support for F6VE75 as seed ortholog is 100%.
Bootstrap support for I3LIF4 as seed ortholog is 100%.

Group of orthologs #3287. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 S.scrofa:125

Q4H2Y1              	100.00%		F1S139              	100.00%
                    	       		F1S8T0              	17.39%
Bootstrap support for Q4H2Y1 as seed ortholog is 100%.
Bootstrap support for F1S139 as seed ortholog is 99%.

Group of orthologs #3288. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 S.scrofa:154

F6Z010              	100.00%		I3LPK4              	100.00%
                    	       		F1SED3              	24.23%
Bootstrap support for F6Z010 as seed ortholog is 100%.
Bootstrap support for I3LPK4 as seed ortholog is 99%.

Group of orthologs #3289. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:32

F6UWQ4              	100.00%		F1RX35              	100.00%
Bootstrap support for F6UWQ4 as seed ortholog is 99%.
Bootstrap support for F1RX35 as seed ortholog is 80%.

Group of orthologs #3290. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 S.scrofa:226

F7BPY2              	100.00%		F1S0A8              	100.00%
Bootstrap support for F7BPY2 as seed ortholog is 100%.
Bootstrap support for F1S0A8 as seed ortholog is 100%.

Group of orthologs #3291. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.scrofa:9

H2Y3T6              	100.00%		F1RHW4              	100.00%
Bootstrap support for H2Y3T6 as seed ortholog is 99%.
Bootstrap support for F1RHW4 as seed ortholog is 39%.
Alternative seed ortholog is I3LCQ9 (9 bits away from this cluster)

Group of orthologs #3292. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:156

F6SU61              	100.00%		I3LJJ4              	100.00%
Bootstrap support for F6SU61 as seed ortholog is 100%.
Bootstrap support for I3LJJ4 as seed ortholog is 100%.

Group of orthologs #3293. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 S.scrofa:226

H2XR99              	100.00%		F1SHB3              	100.00%
Bootstrap support for H2XR99 as seed ortholog is 100%.
Bootstrap support for F1SHB3 as seed ortholog is 100%.

Group of orthologs #3294. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 S.scrofa:171

F6WMA6              	100.00%		Q8MJ49              	100.00%
Bootstrap support for F6WMA6 as seed ortholog is 100%.
Bootstrap support for Q8MJ49 as seed ortholog is 100%.

Group of orthologs #3295. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.scrofa:164

H2XVW6              	100.00%		F1RN78              	100.00%
                    	       		F1S6H0              	30.03%
                    	       		F1RLG9              	15.85%
Bootstrap support for H2XVW6 as seed ortholog is 100%.
Bootstrap support for F1RN78 as seed ortholog is 99%.

Group of orthologs #3296. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.scrofa:19

F6X0G2              	100.00%		F1RSN9              	100.00%
                    	       		F1RWA2              	6.19%
Bootstrap support for F6X0G2 as seed ortholog is 100%.
Bootstrap support for F1RSN9 as seed ortholog is 61%.
Alternative seed ortholog is I3LTT7 (19 bits away from this cluster)

Group of orthologs #3297. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.scrofa:180

F7A9Q6              	100.00%		F1SIU2              	100.00%
                    	       		F1SSG6              	26.07%
Bootstrap support for F7A9Q6 as seed ortholog is 100%.
Bootstrap support for F1SIU2 as seed ortholog is 99%.

Group of orthologs #3298. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.scrofa:225

H2XVM4              	100.00%		F1SAN7              	100.00%
                    	       		F1SEW6              	18.25%
Bootstrap support for H2XVM4 as seed ortholog is 100%.
Bootstrap support for F1SAN7 as seed ortholog is 100%.

Group of orthologs #3299. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.scrofa:225

F7B383              	100.00%		I3LD55              	100.00%
                    	       		F1RXY4              	44.47%
Bootstrap support for F7B383 as seed ortholog is 100%.
Bootstrap support for I3LD55 as seed ortholog is 100%.

Group of orthologs #3300. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.scrofa:225

F6Q7P2              	100.00%		F1RFA5              	100.00%
Bootstrap support for F6Q7P2 as seed ortholog is 100%.
Bootstrap support for F1RFA5 as seed ortholog is 100%.

Group of orthologs #3301. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.scrofa:124

F6Q249              	100.00%		F1RGN3              	100.00%
Bootstrap support for F6Q249 as seed ortholog is 100%.
Bootstrap support for F1RGN3 as seed ortholog is 99%.

Group of orthologs #3302. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.scrofa:225

F6RF58              	100.00%		F1RID2              	100.00%
Bootstrap support for F6RF58 as seed ortholog is 100%.
Bootstrap support for F1RID2 as seed ortholog is 100%.

Group of orthologs #3303. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.scrofa:225

F6PM95              	100.00%		I3L928              	100.00%
Bootstrap support for F6PM95 as seed ortholog is 100%.
Bootstrap support for I3L928 as seed ortholog is 100%.

Group of orthologs #3304. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.scrofa:154

F6ZGR3              	100.00%		F1SA87              	100.00%
Bootstrap support for F6ZGR3 as seed ortholog is 100%.
Bootstrap support for F1SA87 as seed ortholog is 99%.

Group of orthologs #3305. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.scrofa:225

F6ZIF8              	100.00%		F1SF75              	100.00%
Bootstrap support for F6ZIF8 as seed ortholog is 100%.
Bootstrap support for F1SF75 as seed ortholog is 100%.

Group of orthologs #3306. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.scrofa:225

F6SSS9              	100.00%		I3LDY2              	100.00%
Bootstrap support for F6SSS9 as seed ortholog is 100%.
Bootstrap support for I3LDY2 as seed ortholog is 100%.

Group of orthologs #3307. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 S.scrofa:225

H2XKF1              	100.00%		F1SDE9              	100.00%
Bootstrap support for H2XKF1 as seed ortholog is 100%.
Bootstrap support for F1SDE9 as seed ortholog is 100%.

Group of orthologs #3308. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 S.scrofa:120

F6WDK3              	100.00%		F1SLJ6              	100.00%
                    	       		F1S5Q8              	9.84%
Bootstrap support for F6WDK3 as seed ortholog is 100%.
Bootstrap support for F1SLJ6 as seed ortholog is 99%.

Group of orthologs #3309. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 S.scrofa:224

H2XJL8              	100.00%		F2Z529              	100.00%
                    	       		I3LCB4              	12.63%
Bootstrap support for H2XJL8 as seed ortholog is 100%.
Bootstrap support for F2Z529 as seed ortholog is 100%.

Group of orthologs #3310. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 S.scrofa:224

F6SCE7              	100.00%		F1S3B4              	100.00%
Bootstrap support for F6SCE7 as seed ortholog is 100%.
Bootstrap support for F1S3B4 as seed ortholog is 100%.

Group of orthologs #3311. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 S.scrofa:224

F7A9A6              	100.00%		F1SL55              	100.00%
Bootstrap support for F7A9A6 as seed ortholog is 100%.
Bootstrap support for F1SL55 as seed ortholog is 100%.

Group of orthologs #3312. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.scrofa:224

Q1RPY5              	100.00%		F1RVZ4              	100.00%
Bootstrap support for Q1RPY5 as seed ortholog is 83%.
Bootstrap support for F1RVZ4 as seed ortholog is 100%.

Group of orthologs #3313. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 S.scrofa:224

F6Z535              	100.00%		I3LVI2              	100.00%
Bootstrap support for F6Z535 as seed ortholog is 100%.
Bootstrap support for I3LVI2 as seed ortholog is 100%.

Group of orthologs #3314. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.scrofa:35

H2XMV3              	100.00%		Q8MIP7              	100.00%
Bootstrap support for H2XMV3 as seed ortholog is 97%.
Bootstrap support for Q8MIP7 as seed ortholog is 81%.

Group of orthologs #3315. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.scrofa:163

F6T3M2              	100.00%		P20112              	100.00%
                    	       		F1RQB3              	27.51%
Bootstrap support for F6T3M2 as seed ortholog is 99%.
Bootstrap support for P20112 as seed ortholog is 99%.

Group of orthologs #3316. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 S.scrofa:223

F6SXZ3              	100.00%		F1RP25              	100.00%
Bootstrap support for F6SXZ3 as seed ortholog is 100%.
Bootstrap support for F1RP25 as seed ortholog is 100%.

Group of orthologs #3317. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 S.scrofa:79

F6Z6P7              	100.00%		F1RJW7              	100.00%
Bootstrap support for F6Z6P7 as seed ortholog is 100%.
Bootstrap support for F1RJW7 as seed ortholog is 99%.

Group of orthologs #3318. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.scrofa:42

F6W4M3              	100.00%		F1RXX2              	100.00%
Bootstrap support for F6W4M3 as seed ortholog is 95%.
Bootstrap support for F1RXX2 as seed ortholog is 90%.

Group of orthologs #3319. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 S.scrofa:223

F6Q9P1              	100.00%		F1SK30              	100.00%
Bootstrap support for F6Q9P1 as seed ortholog is 100%.
Bootstrap support for F1SK30 as seed ortholog is 100%.

Group of orthologs #3320. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 S.scrofa:223

F6U823              	100.00%		F1SBE3              	100.00%
Bootstrap support for F6U823 as seed ortholog is 100%.
Bootstrap support for F1SBE3 as seed ortholog is 100%.

Group of orthologs #3321. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 S.scrofa:105

F6W3K8              	100.00%		F1SH74              	100.00%
Bootstrap support for F6W3K8 as seed ortholog is 100%.
Bootstrap support for F1SH74 as seed ortholog is 99%.

Group of orthologs #3322. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:117

H2XWT2              	100.00%		F1S5B2              	100.00%
Bootstrap support for H2XWT2 as seed ortholog is 99%.
Bootstrap support for F1S5B2 as seed ortholog is 100%.

Group of orthologs #3323. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.scrofa:153

F6X197              	100.00%		I3LLD8              	100.00%
Bootstrap support for F6X197 as seed ortholog is 95%.
Bootstrap support for I3LLD8 as seed ortholog is 99%.

Group of orthologs #3324. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:98

F6WW36              	100.00%		Q9XT00              	100.00%
Bootstrap support for F6WW36 as seed ortholog is 98%.
Bootstrap support for Q9XT00 as seed ortholog is 99%.

Group of orthologs #3325. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.scrofa:79

F7API1              	100.00%		I3LSN6              	100.00%
Bootstrap support for F7API1 as seed ortholog is 100%.
Bootstrap support for I3LSN6 as seed ortholog is 99%.

Group of orthologs #3326. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 S.scrofa:223

Q8HIN0              	100.00%		O79881              	100.00%
Bootstrap support for Q8HIN0 as seed ortholog is 100%.
Bootstrap support for O79881 as seed ortholog is 100%.

Group of orthologs #3327. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:222

H2XVL1              	100.00%		F1RH71              	100.00%
                    	       		I3LD14              	17.46%
                    	       		F1RMB6              	16.40%
Bootstrap support for H2XVL1 as seed ortholog is 100%.
Bootstrap support for F1RH71 as seed ortholog is 100%.

Group of orthologs #3328. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:222

H2XMT6              	100.00%		I3LGS7              	100.00%
                    	       		F1S3X7              	18.91%
Bootstrap support for H2XMT6 as seed ortholog is 100%.
Bootstrap support for I3LGS7 as seed ortholog is 100%.

Group of orthologs #3329. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:222

H2XP26              	100.00%		I3LR64              	100.00%
                    	       		I3LA87              	59.46%
Bootstrap support for H2XP26 as seed ortholog is 100%.
Bootstrap support for I3LR64 as seed ortholog is 100%.

Group of orthologs #3330. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:128

Q4H2U5              	100.00%		I3LB66              	100.00%
                    	       		F1S8X3              	28.38%
Bootstrap support for Q4H2U5 as seed ortholog is 100%.
Bootstrap support for I3LB66 as seed ortholog is 99%.

Group of orthologs #3331. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:13

F6UTG5              	100.00%		D7RA28              	100.00%
Bootstrap support for F6UTG5 as seed ortholog is 100%.
Bootstrap support for D7RA28 as seed ortholog is 88%.

Group of orthologs #3332. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:222

F6VJL7              	100.00%		A1XQU5              	100.00%
Bootstrap support for F6VJL7 as seed ortholog is 100%.
Bootstrap support for A1XQU5 as seed ortholog is 100%.

Group of orthologs #3333. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:222

F6PKT6              	100.00%		F1RWS7              	100.00%
Bootstrap support for F6PKT6 as seed ortholog is 100%.
Bootstrap support for F1RWS7 as seed ortholog is 100%.

Group of orthologs #3334. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:222

F6Q874              	100.00%		F1S3A1              	100.00%
Bootstrap support for F6Q874 as seed ortholog is 100%.
Bootstrap support for F1S3A1 as seed ortholog is 100%.

Group of orthologs #3335. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.scrofa:222

F6ZZX7              	100.00%		F1RJ74              	100.00%
Bootstrap support for F6ZZX7 as seed ortholog is 100%.
Bootstrap support for F1RJ74 as seed ortholog is 100%.

Group of orthologs #3336. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:222

F7BFG7              	100.00%		F1RG67              	100.00%
Bootstrap support for F7BFG7 as seed ortholog is 100%.
Bootstrap support for F1RG67 as seed ortholog is 100%.

Group of orthologs #3337. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:222

F6RNX9              	100.00%		F1SFM8              	100.00%
Bootstrap support for F6RNX9 as seed ortholog is 100%.
Bootstrap support for F1SFM8 as seed ortholog is 100%.

Group of orthologs #3338. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:222

H2XJQ7              	100.00%		F1RUV3              	100.00%
Bootstrap support for H2XJQ7 as seed ortholog is 100%.
Bootstrap support for F1RUV3 as seed ortholog is 100%.

Group of orthologs #3339. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:222

F6YP38              	100.00%		F2Z5C0              	100.00%
Bootstrap support for F6YP38 as seed ortholog is 100%.
Bootstrap support for F2Z5C0 as seed ortholog is 100%.

Group of orthologs #3340. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:222

H2XTR2              	100.00%		F1S7L6              	100.00%
Bootstrap support for H2XTR2 as seed ortholog is 100%.
Bootstrap support for F1S7L6 as seed ortholog is 100%.

Group of orthologs #3341. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:222

H2XYS7              	100.00%		F1SQL5              	100.00%
Bootstrap support for H2XYS7 as seed ortholog is 100%.
Bootstrap support for F1SQL5 as seed ortholog is 100%.

Group of orthologs #3342. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 S.scrofa:222

F7ANZ8              	100.00%		I3LUD5              	100.00%
Bootstrap support for F7ANZ8 as seed ortholog is 100%.
Bootstrap support for I3LUD5 as seed ortholog is 100%.

Group of orthologs #3343. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:130

F6U6A2              	100.00%		F1S551              	100.00%
                    	       		I3LKT4              	46.43%
                    	       		F1SNA5              	28.93%
Bootstrap support for F6U6A2 as seed ortholog is 100%.
Bootstrap support for F1S551 as seed ortholog is 100%.

Group of orthologs #3344. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 S.scrofa:221

F6Y0J0              	100.00%		F1SRU5              	100.00%
                    	       		F1S5K9              	31.06%
                    	       		F1RM22              	13.65%
Bootstrap support for F6Y0J0 as seed ortholog is 71%.
Alternative seed ortholog is F6ZRJ2 (27 bits away from this cluster)
Bootstrap support for F1SRU5 as seed ortholog is 100%.

Group of orthologs #3345. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.scrofa:106

F6ZFI0              	100.00%		F1S2R9              	100.00%
                    	       		F1S2Y0              	10.19%
Bootstrap support for F6ZFI0 as seed ortholog is 99%.
Bootstrap support for F1S2R9 as seed ortholog is 99%.

Group of orthologs #3346. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 S.scrofa:221

F6UW27              	100.00%		F1RSB1              	100.00%
Bootstrap support for F6UW27 as seed ortholog is 100%.
Bootstrap support for F1RSB1 as seed ortholog is 100%.

Group of orthologs #3347. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 S.scrofa:221

F6X5W4              	100.00%		F1RPB5              	100.00%
Bootstrap support for F6X5W4 as seed ortholog is 100%.
Bootstrap support for F1RPB5 as seed ortholog is 100%.

Group of orthologs #3348. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 S.scrofa:221

F6WCB0              	100.00%		F1S001              	100.00%
Bootstrap support for F6WCB0 as seed ortholog is 100%.
Bootstrap support for F1S001 as seed ortholog is 100%.

Group of orthologs #3349. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 S.scrofa:221

F6VN25              	100.00%		F1SV65              	100.00%
Bootstrap support for F6VN25 as seed ortholog is 100%.
Bootstrap support for F1SV65 as seed ortholog is 100%.

Group of orthologs #3350. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 S.scrofa:221

H2XPR5              	100.00%		F1SBH1              	100.00%
Bootstrap support for H2XPR5 as seed ortholog is 100%.
Bootstrap support for F1SBH1 as seed ortholog is 100%.

Group of orthologs #3351. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 S.scrofa:221

H2XJH2              	100.00%		I3LDX3              	100.00%
Bootstrap support for H2XJH2 as seed ortholog is 100%.
Bootstrap support for I3LDX3 as seed ortholog is 100%.

Group of orthologs #3352. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 S.scrofa:220

F6S7L1              	100.00%		F1S655              	100.00%
                    	       		F1S0S1              	37.22%
                    	       		F1S598              	13.15%
                    	       		F1RZT1              	12.00%
Bootstrap support for F6S7L1 as seed ortholog is 100%.
Bootstrap support for F1S655 as seed ortholog is 100%.

Group of orthologs #3353. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 S.scrofa:220

F6VZA9              	100.00%		F1SSS1              	100.00%
F6SJY8              	32.11%		I3LIW1              	38.19%
Bootstrap support for F6VZA9 as seed ortholog is 100%.
Bootstrap support for F1SSS1 as seed ortholog is 100%.

Group of orthologs #3354. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.scrofa:94

F6UI12              	100.00%		F1STE0              	100.00%
                    	       		F1S444              	50.00%
Bootstrap support for F6UI12 as seed ortholog is 97%.
Bootstrap support for F1STE0 as seed ortholog is 99%.

Group of orthologs #3355. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 S.scrofa:220

F7A7N9              	100.00%		F1SMS0              	100.00%
                    	       		I3LF85              	100.00%
Bootstrap support for F7A7N9 as seed ortholog is 100%.
Bootstrap support for F1SMS0 as seed ortholog is 100%.
Bootstrap support for I3LF85 as seed ortholog is 100%.

Group of orthologs #3356. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:220

F6XQ02              	100.00%		F1RPW8              	100.00%
Bootstrap support for F6XQ02 as seed ortholog is 99%.
Bootstrap support for F1RPW8 as seed ortholog is 100%.

Group of orthologs #3357. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 S.scrofa:220

F6U7G3              	100.00%		F1S3U8              	100.00%
Bootstrap support for F6U7G3 as seed ortholog is 100%.
Bootstrap support for F1S3U8 as seed ortholog is 100%.

Group of orthologs #3358. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 S.scrofa:220

F6X4K3              	100.00%		F1RVD2              	100.00%
Bootstrap support for F6X4K3 as seed ortholog is 100%.
Bootstrap support for F1RVD2 as seed ortholog is 100%.

Group of orthologs #3359. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:164

F6XWK4              	100.00%		F1RT47              	100.00%
Bootstrap support for F6XWK4 as seed ortholog is 100%.
Bootstrap support for F1RT47 as seed ortholog is 99%.

Group of orthologs #3360. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:157

F7AH68              	100.00%		F1RWJ9              	100.00%
Bootstrap support for F7AH68 as seed ortholog is 100%.
Bootstrap support for F1RWJ9 as seed ortholog is 100%.

Group of orthologs #3361. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.scrofa:99

F6YNP3              	100.00%		F1SKR5              	100.00%
Bootstrap support for F6YNP3 as seed ortholog is 99%.
Bootstrap support for F1SKR5 as seed ortholog is 99%.

Group of orthologs #3362. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 S.scrofa:220

H2XR04              	100.00%		F1S534              	100.00%
Bootstrap support for H2XR04 as seed ortholog is 100%.
Bootstrap support for F1S534 as seed ortholog is 100%.

Group of orthologs #3363. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 S.scrofa:220

H2XRC4              	100.00%		F1SV59              	100.00%
Bootstrap support for H2XRC4 as seed ortholog is 100%.
Bootstrap support for F1SV59 as seed ortholog is 100%.

Group of orthologs #3364. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.scrofa:96

H2XJH6              	100.00%		I3LQ13              	100.00%
Bootstrap support for H2XJH6 as seed ortholog is 100%.
Bootstrap support for I3LQ13 as seed ortholog is 99%.

Group of orthologs #3365. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 S.scrofa:219

F7A1E5              	100.00%		I3LRJ7              	100.00%
                    	       		B7U654              	36.06%
                    	       		I3LP66              	19.82%
Bootstrap support for F7A1E5 as seed ortholog is 100%.
Bootstrap support for I3LRJ7 as seed ortholog is 100%.

Group of orthologs #3366. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 S.scrofa:154

H2XJJ8              	100.00%		F1RUJ2              	100.00%
                    	       		A5GFN8              	30.45%
Bootstrap support for H2XJJ8 as seed ortholog is 100%.
Bootstrap support for F1RUJ2 as seed ortholog is 100%.

Group of orthologs #3367. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.scrofa:56

F6RN78              	100.00%		B8Y648              	100.00%
Bootstrap support for F6RN78 as seed ortholog is 99%.
Bootstrap support for B8Y648 as seed ortholog is 98%.

Group of orthologs #3368. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 S.scrofa:219

F6Z6N2              	100.00%		F1S5M7              	100.00%
Bootstrap support for F6Z6N2 as seed ortholog is 100%.
Bootstrap support for F1S5M7 as seed ortholog is 100%.

Group of orthologs #3369. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 S.scrofa:219

F7APT3              	100.00%		F1SAB8              	100.00%
Bootstrap support for F7APT3 as seed ortholog is 100%.
Bootstrap support for F1SAB8 as seed ortholog is 100%.

Group of orthologs #3370. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 S.scrofa:219

H2XV90              	100.00%		F1RZ29              	100.00%
Bootstrap support for H2XV90 as seed ortholog is 100%.
Bootstrap support for F1RZ29 as seed ortholog is 100%.

Group of orthologs #3371. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 S.scrofa:19

F6W6Z9              	100.00%		I3L9U0              	100.00%
Bootstrap support for F6W6Z9 as seed ortholog is 70%.
Alternative seed ortholog is F6VT59 (12 bits away from this cluster)
Bootstrap support for I3L9U0 as seed ortholog is 79%.

Group of orthologs #3372. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.scrofa:35

H2XXE6              	100.00%		F1S630              	100.00%
Bootstrap support for H2XXE6 as seed ortholog is 100%.
Bootstrap support for F1S630 as seed ortholog is 85%.

Group of orthologs #3373. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 S.scrofa:136

Q4H2U4              	100.00%		F1RX31              	100.00%
Bootstrap support for Q4H2U4 as seed ortholog is 100%.
Bootstrap support for F1RX31 as seed ortholog is 99%.

Group of orthologs #3374. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 S.scrofa:219

Q5VJS0              	100.00%		F1RZF1              	100.00%
Bootstrap support for Q5VJS0 as seed ortholog is 100%.
Bootstrap support for F1RZF1 as seed ortholog is 100%.

Group of orthologs #3375. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 S.scrofa:219

F6T047              	100.00%		Q2F7Z4              	100.00%
Bootstrap support for F6T047 as seed ortholog is 100%.
Bootstrap support for Q2F7Z4 as seed ortholog is 100%.

Group of orthologs #3376. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 S.scrofa:75

F6XS17              	100.00%		F1S4Q8              	100.00%
                    	       		I3LH49              	57.04%
Bootstrap support for F6XS17 as seed ortholog is 100%.
Bootstrap support for F1S4Q8 as seed ortholog is 98%.

Group of orthologs #3377. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.scrofa:218

H2XND2              	100.00%		F1RUS9              	100.00%
H2XYC6              	8.64%		
Bootstrap support for H2XND2 as seed ortholog is 93%.
Bootstrap support for F1RUS9 as seed ortholog is 100%.

Group of orthologs #3378. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 S.scrofa:218

F6ZS71              	100.00%		F1SSH4              	100.00%
F6VQC2              	64.62%		
Bootstrap support for F6ZS71 as seed ortholog is 100%.
Bootstrap support for F1SSH4 as seed ortholog is 100%.

Group of orthologs #3379. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 S.scrofa:218

F7AES2              	100.00%		F1RW03              	100.00%
Bootstrap support for F7AES2 as seed ortholog is 100%.
Bootstrap support for F1RW03 as seed ortholog is 100%.

Group of orthologs #3380. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 S.scrofa:218

F7B404              	100.00%		F1S555              	100.00%
Bootstrap support for F7B404 as seed ortholog is 100%.
Bootstrap support for F1S555 as seed ortholog is 100%.

Group of orthologs #3381. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 S.scrofa:14

F6ZST9              	100.00%		F1SCX9              	100.00%
Bootstrap support for F6ZST9 as seed ortholog is 79%.
Bootstrap support for F1SCX9 as seed ortholog is 74%.
Alternative seed ortholog is F1RG05 (14 bits away from this cluster)

Group of orthologs #3382. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 S.scrofa:152

F7B1C7              	100.00%		F1SLV1              	100.00%
Bootstrap support for F7B1C7 as seed ortholog is 100%.
Bootstrap support for F1SLV1 as seed ortholog is 100%.

Group of orthologs #3383. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 S.scrofa:218

F6V6S8              	100.00%		P28768              	100.00%
Bootstrap support for F6V6S8 as seed ortholog is 100%.
Bootstrap support for P28768 as seed ortholog is 100%.

Group of orthologs #3384. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:218

F7AQ12              	100.00%		I3LGQ1              	100.00%
Bootstrap support for F7AQ12 as seed ortholog is 100%.
Bootstrap support for I3LGQ1 as seed ortholog is 100%.

Group of orthologs #3385. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.scrofa:89

B5UA19              	100.00%		F1SKD2              	100.00%
                    	       		P32306              	24.00%
                    	       		F1SF06              	23.69%
                    	       		P32307              	9.08%
Bootstrap support for B5UA19 as seed ortholog is 100%.
Bootstrap support for F1SKD2 as seed ortholog is 99%.

Group of orthologs #3386. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 S.scrofa:45

F6Q4W5              	100.00%		P49923              	100.00%
                    	       		I3LUA0              	27.54%
                    	       		F1RZH2              	8.43%
Bootstrap support for F6Q4W5 as seed ortholog is 89%.
Bootstrap support for P49923 as seed ortholog is 82%.

Group of orthologs #3387. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 S.scrofa:73

H2Y3S7              	100.00%		F1RNV6              	100.00%
                    	       		F1RQ60              	25.56%
Bootstrap support for H2Y3S7 as seed ortholog is 100%.
Bootstrap support for F1RNV6 as seed ortholog is 98%.

Group of orthologs #3388. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 S.scrofa:217

F6Y110              	100.00%		F1RH12              	100.00%
Bootstrap support for F6Y110 as seed ortholog is 100%.
Bootstrap support for F1RH12 as seed ortholog is 100%.

Group of orthologs #3389. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 S.scrofa:217

F6YFR8              	100.00%		F1RWL4              	100.00%
Bootstrap support for F6YFR8 as seed ortholog is 100%.
Bootstrap support for F1RWL4 as seed ortholog is 100%.

Group of orthologs #3390. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 S.scrofa:217

F7AIM1              	100.00%		F1SED4              	100.00%
Bootstrap support for F7AIM1 as seed ortholog is 100%.
Bootstrap support for F1SED4 as seed ortholog is 100%.

Group of orthologs #3391. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 S.scrofa:49

H2XTD6              	100.00%		F1S2A8              	100.00%
Bootstrap support for H2XTD6 as seed ortholog is 100%.
Bootstrap support for F1S2A8 as seed ortholog is 94%.

Group of orthologs #3392. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 S.scrofa:217

F7B8N2              	100.00%		F1SKB9              	100.00%
Bootstrap support for F7B8N2 as seed ortholog is 100%.
Bootstrap support for F1SKB9 as seed ortholog is 100%.

Group of orthologs #3393. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 S.scrofa:217

F7ASV3              	100.00%		F1SV73              	100.00%
Bootstrap support for F7ASV3 as seed ortholog is 100%.
Bootstrap support for F1SV73 as seed ortholog is 100%.

Group of orthologs #3394. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 S.scrofa:217

F7AAL2              	100.00%		I3L6R6              	100.00%
Bootstrap support for F7AAL2 as seed ortholog is 100%.
Bootstrap support for I3L6R6 as seed ortholog is 100%.

Group of orthologs #3395. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 S.scrofa:217

H2XME2              	100.00%		I3L704              	100.00%
Bootstrap support for H2XME2 as seed ortholog is 100%.
Bootstrap support for I3L704 as seed ortholog is 100%.

Group of orthologs #3396. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 S.scrofa:216

F6Z2T6              	100.00%		D3U7X2              	100.00%
                    	       		F1RKF5              	23.04%
                    	       		F1RG82              	22.55%
Bootstrap support for F6Z2T6 as seed ortholog is 100%.
Bootstrap support for D3U7X2 as seed ortholog is 100%.

Group of orthologs #3397. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 S.scrofa:216

F6SGP1              	100.00%		F1RFJ1              	100.00%
Bootstrap support for F6SGP1 as seed ortholog is 100%.
Bootstrap support for F1RFJ1 as seed ortholog is 100%.

Group of orthologs #3398. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 S.scrofa:216

F6TJ44              	100.00%		I3LJC2              	100.00%
Bootstrap support for F6TJ44 as seed ortholog is 100%.
Bootstrap support for I3LJC2 as seed ortholog is 100%.

Group of orthologs #3399. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 S.scrofa:216

F6V580              	100.00%		I3LFK1              	100.00%
Bootstrap support for F6V580 as seed ortholog is 100%.
Bootstrap support for I3LFK1 as seed ortholog is 100%.

Group of orthologs #3400. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 S.scrofa:141

H2XJI9              	100.00%		F1SP98              	100.00%
Bootstrap support for H2XJI9 as seed ortholog is 100%.
Bootstrap support for F1SP98 as seed ortholog is 99%.

Group of orthologs #3401. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.scrofa:71

H2XL14              	100.00%		I3L613              	100.00%
Bootstrap support for H2XL14 as seed ortholog is 100%.
Bootstrap support for I3L613 as seed ortholog is 99%.

Group of orthologs #3402. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 S.scrofa:216

F6YY07              	100.00%		Q6Q7J5              	100.00%
Bootstrap support for F6YY07 as seed ortholog is 100%.
Bootstrap support for Q6Q7J5 as seed ortholog is 100%.

Group of orthologs #3403. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:150

H2XZ79              	100.00%		F1RSS8              	100.00%
F7B2P5              	100.00%		I3LLS2              	100.00%
H2XND0              	22.40%		F1RW91              	47.57%
H2XKG9              	12.64%		
F7ABQ9              	11.72%		
H2Y257              	11.72%		
H2XR57              	11.20%		
H2XKW4              	10.38%		
H2Y0P5              	10.07%		
F7BKP7              	9.25%		
F6XSI6              	9.15%		
F7AT69              	8.94%		
F7BL24              	7.61%		
F6YU08              	7.09%		
F6PUY5              	6.17%		
F7A9I0              	5.45%		
Bootstrap support for H2XZ79 as seed ortholog is 99%.
Bootstrap support for F7B2P5 as seed ortholog is 99%.
Bootstrap support for F1RSS8 as seed ortholog is 99%.
Bootstrap support for I3LLS2 as seed ortholog is 99%.

Group of orthologs #3404. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 S.scrofa:50

F6UYC8              	100.00%		P34994              	100.00%
                    	       		Q866U3              	24.81%
                    	       		I3LL93              	24.24%
                    	       		Q95247              	7.25%
                    	       		F1RSG5              	6.11%
Bootstrap support for F6UYC8 as seed ortholog is 79%.
Bootstrap support for P34994 as seed ortholog is 93%.

Group of orthologs #3405. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.scrofa:215

H2Y2N8              	100.00%		B2LW77              	100.00%
                    	       		F1RRJ7              	83.07%
Bootstrap support for H2Y2N8 as seed ortholog is 81%.
Bootstrap support for B2LW77 as seed ortholog is 100%.

Group of orthologs #3406. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 S.scrofa:215

F7AEJ4              	100.00%		F1RFY3              	100.00%
Bootstrap support for F7AEJ4 as seed ortholog is 100%.
Bootstrap support for F1RFY3 as seed ortholog is 100%.

Group of orthologs #3407. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 S.scrofa:215

H2XL81              	100.00%		F1RFZ5              	100.00%
Bootstrap support for H2XL81 as seed ortholog is 100%.
Bootstrap support for F1RFZ5 as seed ortholog is 100%.

Group of orthologs #3408. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 S.scrofa:215

F6S4X0              	100.00%		F1SPF4              	100.00%
Bootstrap support for F6S4X0 as seed ortholog is 100%.
Bootstrap support for F1SPF4 as seed ortholog is 100%.

Group of orthologs #3409. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 S.scrofa:215

F6YYL7              	100.00%		F1S6Q6              	100.00%
Bootstrap support for F6YYL7 as seed ortholog is 100%.
Bootstrap support for F1S6Q6 as seed ortholog is 100%.

Group of orthologs #3410. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 S.scrofa:74

F6ZYA6              	100.00%		F1S4Z2              	100.00%
Bootstrap support for F6ZYA6 as seed ortholog is 100%.
Bootstrap support for F1S4Z2 as seed ortholog is 99%.

Group of orthologs #3411. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 S.scrofa:215

F6U3F2              	100.00%		F2Z5F1              	100.00%
Bootstrap support for F6U3F2 as seed ortholog is 100%.
Bootstrap support for F2Z5F1 as seed ortholog is 100%.

Group of orthologs #3412. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 S.scrofa:215

Q4H2P0              	100.00%		F1S1D8              	100.00%
Bootstrap support for Q4H2P0 as seed ortholog is 100%.
Bootstrap support for F1S1D8 as seed ortholog is 100%.

Group of orthologs #3413. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 S.scrofa:12

H2Y115              	100.00%		F1SST5              	100.00%
Bootstrap support for H2Y115 as seed ortholog is 70%.
Alternative seed ortholog is F6PNQ0 (14 bits away from this cluster)
Bootstrap support for F1SST5 as seed ortholog is 66%.
Alternative seed ortholog is Q007T2 (12 bits away from this cluster)

Group of orthologs #3414. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 S.scrofa:73

H2Y3H7              	100.00%		I3LDC5              	100.00%
Bootstrap support for H2Y3H7 as seed ortholog is 90%.
Bootstrap support for I3LDC5 as seed ortholog is 93%.

Group of orthologs #3415. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 S.scrofa:214

F7ATF3              	100.00%		F1S065              	100.00%
                    	       		F1SC06              	10.74%
Bootstrap support for F7ATF3 as seed ortholog is 100%.
Bootstrap support for F1S065 as seed ortholog is 100%.

Group of orthologs #3416. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:150

F6S146              	100.00%		C3RZA1              	100.00%
Bootstrap support for F6S146 as seed ortholog is 76%.
Bootstrap support for C3RZA1 as seed ortholog is 99%.

Group of orthologs #3417. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 S.scrofa:118

H2XQ72              	100.00%		F1RFL4              	100.00%
Bootstrap support for H2XQ72 as seed ortholog is 100%.
Bootstrap support for F1RFL4 as seed ortholog is 99%.

Group of orthologs #3418. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 S.scrofa:214

F6Z3S0              	100.00%		F1S0G2              	100.00%
Bootstrap support for F6Z3S0 as seed ortholog is 100%.
Bootstrap support for F1S0G2 as seed ortholog is 100%.

Group of orthologs #3419. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 S.scrofa:214

F6V1A9              	100.00%		F1SGP7              	100.00%
Bootstrap support for F6V1A9 as seed ortholog is 100%.
Bootstrap support for F1SGP7 as seed ortholog is 100%.

Group of orthologs #3420. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 S.scrofa:214

F6U3H2              	100.00%		I3L9H4              	100.00%
Bootstrap support for F6U3H2 as seed ortholog is 100%.
Bootstrap support for I3L9H4 as seed ortholog is 100%.

Group of orthologs #3421. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 S.scrofa:73

Q4H356              	100.00%		F1S837              	100.00%
Bootstrap support for Q4H356 as seed ortholog is 77%.
Bootstrap support for F1S837 as seed ortholog is 95%.

Group of orthologs #3422. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 S.scrofa:214

H2Y3J4              	100.00%		F1SJ99              	100.00%
Bootstrap support for H2Y3J4 as seed ortholog is 100%.
Bootstrap support for F1SJ99 as seed ortholog is 100%.

Group of orthologs #3423. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 S.scrofa:214

H2XX64              	100.00%		I3LJT9              	100.00%
Bootstrap support for H2XX64 as seed ortholog is 100%.
Bootstrap support for I3LJT9 as seed ortholog is 100%.

Group of orthologs #3424. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.scrofa:213

F6TRJ7              	100.00%		F1S1H2              	100.00%
                    	       		I3LUW2              	27.30%
                    	       		I3LE21              	8.79%
Bootstrap support for F6TRJ7 as seed ortholog is 100%.
Bootstrap support for F1S1H2 as seed ortholog is 100%.

Group of orthologs #3425. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.scrofa:213

F6WH15              	100.00%		F1S2E5              	100.00%
                    	       		F1SNB6              	17.74%
                    	       		I3LK07              	17.74%
Bootstrap support for F6WH15 as seed ortholog is 100%.
Bootstrap support for F1S2E5 as seed ortholog is 100%.

Group of orthologs #3426. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.scrofa:213

F6RGB2              	100.00%		F1S1E6              	100.00%
                    	       		I3LUF4              	17.44%
Bootstrap support for F6RGB2 as seed ortholog is 100%.
Bootstrap support for F1S1E6 as seed ortholog is 100%.

Group of orthologs #3427. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.scrofa:213

H2XSJ8              	100.00%		F1RFW9              	100.00%
                    	       		F1S6P9              	17.02%
Bootstrap support for H2XSJ8 as seed ortholog is 100%.
Bootstrap support for F1RFW9 as seed ortholog is 100%.

Group of orthologs #3428. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.scrofa:106

F6TX70              	100.00%		I3LIF3              	100.00%
F6TX66              	63.22%		
Bootstrap support for F6TX70 as seed ortholog is 100%.
Bootstrap support for I3LIF3 as seed ortholog is 99%.

Group of orthologs #3429. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.scrofa:213

F7BF34              	100.00%		F1SNJ4              	100.00%
                    	       		F1SI98              	18.03%
Bootstrap support for F7BF34 as seed ortholog is 100%.
Bootstrap support for F1SNJ4 as seed ortholog is 100%.

Group of orthologs #3430. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.scrofa:213

F6PHN6              	100.00%		F1RGQ7              	100.00%
Bootstrap support for F6PHN6 as seed ortholog is 100%.
Bootstrap support for F1RGQ7 as seed ortholog is 100%.

Group of orthologs #3431. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.scrofa:213

H2XRN7              	100.00%		F1RVZ3              	100.00%
Bootstrap support for H2XRN7 as seed ortholog is 100%.
Bootstrap support for F1RVZ3 as seed ortholog is 100%.

Group of orthologs #3432. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.scrofa:12

F6WUA7              	100.00%		F1SR79              	100.00%
Bootstrap support for F6WUA7 as seed ortholog is 100%.
Bootstrap support for F1SR79 as seed ortholog is 64%.
Alternative seed ortholog is F1SM19 (12 bits away from this cluster)

Group of orthologs #3433. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.scrofa:213

H2XPE3              	100.00%		F1S6I3              	100.00%
Bootstrap support for H2XPE3 as seed ortholog is 100%.
Bootstrap support for F1S6I3 as seed ortholog is 100%.

Group of orthologs #3434. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.scrofa:213

F7B6W8              	100.00%		F1SRM2              	100.00%
Bootstrap support for F7B6W8 as seed ortholog is 100%.
Bootstrap support for F1SRM2 as seed ortholog is 100%.

Group of orthologs #3435. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 S.scrofa:132

H2XTM5              	100.00%		I3LTG9              	100.00%
Bootstrap support for H2XTM5 as seed ortholog is 100%.
Bootstrap support for I3LTG9 as seed ortholog is 99%.

Group of orthologs #3436. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 S.scrofa:34

F6ZCN2              	100.00%		F1SKD6              	100.00%
H2XWF3              	32.37%		F1SBQ5              	49.49%
                    	       		F1SBP8              	42.31%
                    	       		I3LQ25              	25.26%
                    	       		F1SKP1              	22.95%
                    	       		F1RVX0              	12.31%
Bootstrap support for F6ZCN2 as seed ortholog is 64%.
Alternative seed ortholog is F6R5Y6 (14 bits away from this cluster)
Bootstrap support for F1SKD6 as seed ortholog is 99%.

Group of orthologs #3437. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:74

Q4H3E0              	100.00%		P17741              	100.00%
                    	       		P12682              	64.04%
                    	       		I3LKF1              	60.96%
                    	       		F1RQ19              	41.67%
                    	       		F1RVC4              	35.09%
Bootstrap support for Q4H3E0 as seed ortholog is 100%.
Bootstrap support for P17741 as seed ortholog is 99%.

Group of orthologs #3438. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:212

H2XK44              	100.00%		F1RWH1              	100.00%
                    	       		F1ST98              	26.63%
                    	       		F2Z5T3              	15.98%
                    	       		I3LQ28              	12.43%
Bootstrap support for H2XK44 as seed ortholog is 100%.
Bootstrap support for F1RWH1 as seed ortholog is 100%.

Group of orthologs #3439. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:212

F6Q484              	100.00%		F1RGG1              	100.00%
                    	       		Q29308              	75.31%
                    	       		I3LQK3              	64.20%
Bootstrap support for F6Q484 as seed ortholog is 100%.
Bootstrap support for F1RGG1 as seed ortholog is 100%.

Group of orthologs #3440. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:134

F6ZFZ3              	100.00%		B4YSE7              	100.00%
                    	       		I3LGP3              	5.28%
Bootstrap support for F6ZFZ3 as seed ortholog is 100%.
Bootstrap support for B4YSE7 as seed ortholog is 99%.

Group of orthologs #3441. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:104

H2Y1V5              	100.00%		F1SSV2              	100.00%
                    	       		I3LTM8              	82.02%
Bootstrap support for H2Y1V5 as seed ortholog is 100%.
Bootstrap support for F1SSV2 as seed ortholog is 99%.

Group of orthologs #3442. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:212

H2XKM0              	100.00%		F1RGV8              	100.00%
Bootstrap support for H2XKM0 as seed ortholog is 100%.
Bootstrap support for F1RGV8 as seed ortholog is 100%.

Group of orthologs #3443. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:212

F6WWT1              	100.00%		F1S4Y8              	100.00%
Bootstrap support for F6WWT1 as seed ortholog is 100%.
Bootstrap support for F1S4Y8 as seed ortholog is 100%.

Group of orthologs #3444. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:212

F6WIP7              	100.00%		F1SAY8              	100.00%
Bootstrap support for F6WIP7 as seed ortholog is 100%.
Bootstrap support for F1SAY8 as seed ortholog is 100%.

Group of orthologs #3445. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:212

F6XYH1              	100.00%		F1SCR3              	100.00%
Bootstrap support for F6XYH1 as seed ortholog is 100%.
Bootstrap support for F1SCR3 as seed ortholog is 100%.

Group of orthologs #3446. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:212

F7AHQ4              	100.00%		F1SQH1              	100.00%
Bootstrap support for F7AHQ4 as seed ortholog is 100%.
Bootstrap support for F1SQH1 as seed ortholog is 100%.

Group of orthologs #3447. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:212

F6YV15              	100.00%		I3LJ47              	100.00%
Bootstrap support for F6YV15 as seed ortholog is 100%.
Bootstrap support for I3LJ47 as seed ortholog is 100%.

Group of orthologs #3448. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:93

Q4H3U1              	100.00%		F2Z5H8              	100.00%
Bootstrap support for Q4H3U1 as seed ortholog is 100%.
Bootstrap support for F2Z5H8 as seed ortholog is 100%.

Group of orthologs #3449. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 S.scrofa:212

Q4H3T3              	100.00%		I3LA92              	100.00%
Bootstrap support for Q4H3T3 as seed ortholog is 100%.
Bootstrap support for I3LA92 as seed ortholog is 100%.

Group of orthologs #3450. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 S.scrofa:34

H2XQT4              	100.00%		F1SQX1              	100.00%
F7AM82              	9.05%		I3LFJ4              	9.43%
Bootstrap support for H2XQT4 as seed ortholog is 56%.
Alternative seed ortholog is F6QL68 (10 bits away from this cluster)
Bootstrap support for F1SQX1 as seed ortholog is 84%.

Group of orthologs #3451. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.scrofa:211

F6YGA9              	100.00%		F1RNU0              	100.00%
                    	       		I3L8G5              	59.95%
Bootstrap support for F6YGA9 as seed ortholog is 100%.
Bootstrap support for F1RNU0 as seed ortholog is 100%.

Group of orthologs #3452. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.scrofa:211

F6QU80              	100.00%		F1SIB8              	100.00%
                    	       		I3LD61              	64.93%
Bootstrap support for F6QU80 as seed ortholog is 100%.
Bootstrap support for F1SIB8 as seed ortholog is 100%.

Group of orthologs #3453. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.scrofa:126

F6Y3T4              	100.00%		F1S3P8              	100.00%
                    	       		I3LHT9              	20.81%
Bootstrap support for F6Y3T4 as seed ortholog is 100%.
Bootstrap support for F1S3P8 as seed ortholog is 99%.

Group of orthologs #3454. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.scrofa:211

F6VS86              	100.00%		F1SBT9              	100.00%
                    	       		F1SNG3              	17.20%
Bootstrap support for F6VS86 as seed ortholog is 100%.
Bootstrap support for F1SBT9 as seed ortholog is 100%.

Group of orthologs #3455. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.scrofa:211

F6SFR5              	100.00%		F1RLI7              	100.00%
Bootstrap support for F6SFR5 as seed ortholog is 100%.
Bootstrap support for F1RLI7 as seed ortholog is 100%.

Group of orthologs #3456. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.scrofa:211

F6UB54              	100.00%		F1SJK6              	100.00%
Bootstrap support for F6UB54 as seed ortholog is 100%.
Bootstrap support for F1SJK6 as seed ortholog is 100%.

Group of orthologs #3457. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.scrofa:211

F7AWE3              	100.00%		F1SIW4              	100.00%
Bootstrap support for F7AWE3 as seed ortholog is 100%.
Bootstrap support for F1SIW4 as seed ortholog is 100%.

Group of orthologs #3458. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 S.scrofa:211

F6YXT8              	100.00%		I3L679              	100.00%
Bootstrap support for F6YXT8 as seed ortholog is 100%.
Bootstrap support for I3L679 as seed ortholog is 100%.

Group of orthologs #3459. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:210

F6X3A0              	100.00%		F1S1G5              	100.00%
                    	       		I3L7Z3              	48.45%
Bootstrap support for F6X3A0 as seed ortholog is 100%.
Bootstrap support for F1S1G5 as seed ortholog is 100%.

Group of orthologs #3460. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:210

Q4H2N1              	100.00%		F1RM77              	100.00%
                    	       		F1S178              	19.54%
Bootstrap support for Q4H2N1 as seed ortholog is 100%.
Bootstrap support for F1RM77 as seed ortholog is 100%.

Group of orthologs #3461. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:210

F6PK60              	100.00%		F1RIE0              	100.00%
Bootstrap support for F6PK60 as seed ortholog is 100%.
Bootstrap support for F1RIE0 as seed ortholog is 100%.

Group of orthologs #3462. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:210

H2XM97              	100.00%		F1S8U0              	100.00%
Bootstrap support for H2XM97 as seed ortholog is 100%.
Bootstrap support for F1S8U0 as seed ortholog is 100%.

Group of orthologs #3463. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:210

F7AR57              	100.00%		F1SMS5              	100.00%
Bootstrap support for F7AR57 as seed ortholog is 100%.
Bootstrap support for F1SMS5 as seed ortholog is 100%.

Group of orthologs #3464. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:210

H2Y3R7              	100.00%		F1S5W4              	100.00%
Bootstrap support for H2Y3R7 as seed ortholog is 100%.
Bootstrap support for F1S5W4 as seed ortholog is 100%.

Group of orthologs #3465. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 S.scrofa:210

F6U688              	100.00%		Q00968              	100.00%
Bootstrap support for F6U688 as seed ortholog is 99%.
Bootstrap support for Q00968 as seed ortholog is 100%.

Group of orthologs #3466. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:210

F6YN20              	100.00%		I3LU20              	100.00%
Bootstrap support for F6YN20 as seed ortholog is 100%.
Bootstrap support for I3LU20 as seed ortholog is 100%.

Group of orthologs #3467. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:30

F6YRR0              	100.00%		Q95307              	100.00%
Bootstrap support for F6YRR0 as seed ortholog is 100%.
Bootstrap support for Q95307 as seed ortholog is 90%.

Group of orthologs #3468. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:210

Q4H2Q4              	100.00%		F1SSY4              	100.00%
Bootstrap support for Q4H2Q4 as seed ortholog is 100%.
Bootstrap support for F1SSY4 as seed ortholog is 100%.

Group of orthologs #3469. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:210

H2XQZ0              	100.00%		I3LJI9              	100.00%
Bootstrap support for H2XQZ0 as seed ortholog is 100%.
Bootstrap support for I3LJI9 as seed ortholog is 100%.

Group of orthologs #3470. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 S.scrofa:210

H2Y3T4              	100.00%		F2Z5R5              	100.00%
Bootstrap support for H2Y3T4 as seed ortholog is 100%.
Bootstrap support for F2Z5R5 as seed ortholog is 100%.

Group of orthologs #3471. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 S.scrofa:99

H2Y012              	100.00%		F1SJ87              	100.00%
                    	       		I3LA64              	52.01%
                    	       		I3LUB1              	51.53%
                    	       		F1S8I1              	40.15%
                    	       		I3L8E0              	26.00%
Bootstrap support for H2Y012 as seed ortholog is 79%.
Bootstrap support for F1SJ87 as seed ortholog is 99%.

Group of orthologs #3472. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.scrofa:142

F6WIN9              	100.00%		I3LAV3              	100.00%
                    	       		I3LUP5              	26.13%
                    	       		F1SI24              	22.11%
Bootstrap support for F6WIN9 as seed ortholog is 100%.
Bootstrap support for I3LAV3 as seed ortholog is 100%.

Group of orthologs #3473. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.scrofa:209

F6XT02              	100.00%		F1RTT0              	100.00%
                    	       		B2DCZ7              	21.38%
Bootstrap support for F6XT02 as seed ortholog is 100%.
Bootstrap support for F1RTT0 as seed ortholog is 100%.

Group of orthologs #3474. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.scrofa:30

H2XT04              	100.00%		A3RGC1              	100.00%
                    	       		A5J0K7              	11.45%
Bootstrap support for H2XT04 as seed ortholog is 100%.
Bootstrap support for A3RGC1 as seed ortholog is 80%.

Group of orthologs #3475. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.scrofa:74

H2XYZ0              	100.00%		F1RKD0              	100.00%
                    	       		F2Z531              	65.24%
Bootstrap support for H2XYZ0 as seed ortholog is 100%.
Bootstrap support for F1RKD0 as seed ortholog is 99%.

Group of orthologs #3476. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.scrofa:105

F7B9G3              	100.00%		O18831              	100.00%
                    	       		F1SPJ6              	48.69%
Bootstrap support for F7B9G3 as seed ortholog is 99%.
Bootstrap support for O18831 as seed ortholog is 99%.

Group of orthologs #3477. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.scrofa:209

F6RED0              	100.00%		F1RR97              	100.00%
Bootstrap support for F6RED0 as seed ortholog is 100%.
Bootstrap support for F1RR97 as seed ortholog is 100%.

Group of orthologs #3478. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.scrofa:51

F7B4F4              	100.00%		F1SDF5              	100.00%
Bootstrap support for F7B4F4 as seed ortholog is 100%.
Bootstrap support for F1SDF5 as seed ortholog is 83%.

Group of orthologs #3479. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.scrofa:116

H2XRE1              	100.00%		F1SUS2              	100.00%
Bootstrap support for H2XRE1 as seed ortholog is 100%.
Bootstrap support for F1SUS2 as seed ortholog is 99%.

Group of orthologs #3480. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.scrofa:209

Q4H3D9              	100.00%		F1SJ88              	100.00%
Bootstrap support for Q4H3D9 as seed ortholog is 100%.
Bootstrap support for F1SJ88 as seed ortholog is 100%.

Group of orthologs #3481. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.scrofa:209

F7A3K2              	100.00%		P14332              	100.00%
Bootstrap support for F7A3K2 as seed ortholog is 100%.
Bootstrap support for P14332 as seed ortholog is 100%.

Group of orthologs #3482. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 S.scrofa:209

H2Y397              	100.00%		I3LGW8              	100.00%
Bootstrap support for H2Y397 as seed ortholog is 100%.
Bootstrap support for I3LGW8 as seed ortholog is 100%.

Group of orthologs #3483. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.scrofa:208

F6WFD1              	100.00%		F1RI16              	100.00%
                    	       		F1RQ49              	19.03%
                    	       		F1STF1              	11.42%
Bootstrap support for F6WFD1 as seed ortholog is 100%.
Bootstrap support for F1RI16 as seed ortholog is 100%.

Group of orthologs #3484. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:150

F6RGJ1              	100.00%		F1S533              	100.00%
                    	       		F1S592              	14.34%
Bootstrap support for F6RGJ1 as seed ortholog is 100%.
Bootstrap support for F1S533 as seed ortholog is 100%.

Group of orthologs #3485. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.scrofa:208

F6VIC3              	100.00%		A5GFS8              	100.00%
Bootstrap support for F6VIC3 as seed ortholog is 100%.
Bootstrap support for A5GFS8 as seed ortholog is 100%.

Group of orthologs #3486. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.scrofa:208

F6XNV2              	100.00%		F1RN56              	100.00%
Bootstrap support for F6XNV2 as seed ortholog is 100%.
Bootstrap support for F1RN56 as seed ortholog is 100%.

Group of orthologs #3487. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.scrofa:208

H2XQA6              	100.00%		F1RSQ0              	100.00%
Bootstrap support for H2XQA6 as seed ortholog is 100%.
Bootstrap support for F1RSQ0 as seed ortholog is 100%.

Group of orthologs #3488. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.scrofa:208

F7A102              	100.00%		F1SAG4              	100.00%
Bootstrap support for F7A102 as seed ortholog is 100%.
Bootstrap support for F1SAG4 as seed ortholog is 100%.

Group of orthologs #3489. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.scrofa:208

F6WF37              	100.00%		F1SRI0              	100.00%
Bootstrap support for F6WF37 as seed ortholog is 100%.
Bootstrap support for F1SRI0 as seed ortholog is 100%.

Group of orthologs #3490. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.scrofa:208

H2XLX9              	100.00%		F1S372              	100.00%
Bootstrap support for H2XLX9 as seed ortholog is 100%.
Bootstrap support for F1S372 as seed ortholog is 100%.

Group of orthologs #3491. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.scrofa:208

F6XUK1              	100.00%		F2Z5Q1              	100.00%
Bootstrap support for F6XUK1 as seed ortholog is 100%.
Bootstrap support for F2Z5Q1 as seed ortholog is 100%.

Group of orthologs #3492. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 S.scrofa:208

H2XP92              	100.00%		F1S9C5              	100.00%
Bootstrap support for H2XP92 as seed ortholog is 100%.
Bootstrap support for F1S9C5 as seed ortholog is 100%.

Group of orthologs #3493. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.scrofa:104

F6X5Z3              	100.00%		F1SEN8              	100.00%
                    	       		F1RWW4              	10.57%
Bootstrap support for F6X5Z3 as seed ortholog is 100%.
Bootstrap support for F1SEN8 as seed ortholog is 99%.

Group of orthologs #3494. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.scrofa:167

F6VGI1              	100.00%		I3LGA2              	100.00%
                    	       		I3LFG5              	14.78%
Bootstrap support for F6VGI1 as seed ortholog is 100%.
Bootstrap support for I3LGA2 as seed ortholog is 100%.

Group of orthologs #3495. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.scrofa:207

F6YX42              	100.00%		P11936              	100.00%
F6WHG5              	22.58%		
Bootstrap support for F6YX42 as seed ortholog is 100%.
Bootstrap support for P11936 as seed ortholog is 100%.

Group of orthologs #3496. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.scrofa:207

F7BB49              	100.00%		F1RS48              	100.00%
Bootstrap support for F7BB49 as seed ortholog is 100%.
Bootstrap support for F1RS48 as seed ortholog is 100%.

Group of orthologs #3497. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.scrofa:207

F6QTI2              	100.00%		F1SUQ2              	100.00%
Bootstrap support for F6QTI2 as seed ortholog is 100%.
Bootstrap support for F1SUQ2 as seed ortholog is 100%.

Group of orthologs #3498. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.scrofa:207

F7B9T1              	100.00%		F1RZQ7              	100.00%
Bootstrap support for F7B9T1 as seed ortholog is 100%.
Bootstrap support for F1RZQ7 as seed ortholog is 100%.

Group of orthologs #3499. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.scrofa:207

F7AEK6              	100.00%		F1S7A5              	100.00%
Bootstrap support for F7AEK6 as seed ortholog is 100%.
Bootstrap support for F1S7A5 as seed ortholog is 100%.

Group of orthologs #3500. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.scrofa:36

F6SPF7              	100.00%		I3L7L9              	100.00%
Bootstrap support for F6SPF7 as seed ortholog is 99%.
Bootstrap support for I3L7L9 as seed ortholog is 80%.

Group of orthologs #3501. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.scrofa:207

F6WHB0              	100.00%		F2Z5F6              	100.00%
Bootstrap support for F6WHB0 as seed ortholog is 100%.
Bootstrap support for F2Z5F6 as seed ortholog is 100%.

Group of orthologs #3502. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.scrofa:207

F6QZY3              	100.00%		I3LJU1              	100.00%
Bootstrap support for F6QZY3 as seed ortholog is 100%.
Bootstrap support for I3LJU1 as seed ortholog is 100%.

Group of orthologs #3503. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 S.scrofa:102

H2Y1W9              	100.00%		F1S4R5              	100.00%
Bootstrap support for H2Y1W9 as seed ortholog is 68%.
Alternative seed ortholog is F6YB82 (10 bits away from this cluster)
Bootstrap support for F1S4R5 as seed ortholog is 100%.

Group of orthologs #3504. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.scrofa:207

H2XW33              	100.00%		F1SHH4              	100.00%
Bootstrap support for H2XW33 as seed ortholog is 100%.
Bootstrap support for F1SHH4 as seed ortholog is 100%.

Group of orthologs #3505. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.scrofa:123

F7AM07              	100.00%		Q06A98              	100.00%
Bootstrap support for F7AM07 as seed ortholog is 100%.
Bootstrap support for Q06A98 as seed ortholog is 100%.

Group of orthologs #3506. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 S.scrofa:207

H2XPM9              	100.00%		I3LU89              	100.00%
Bootstrap support for H2XPM9 as seed ortholog is 100%.
Bootstrap support for I3LU89 as seed ortholog is 100%.

Group of orthologs #3507. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.scrofa:118

F6Y1B6              	100.00%		F1S2F5              	100.00%
                    	       		I3LTJ5              	75.47%
Bootstrap support for F6Y1B6 as seed ortholog is 100%.
Bootstrap support for F1S2F5 as seed ortholog is 99%.

Group of orthologs #3508. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.scrofa:206

F6ZE98              	100.00%		F1RZE0              	100.00%
                    	       		F1SFP3              	100.00%
Bootstrap support for F6ZE98 as seed ortholog is 100%.
Bootstrap support for F1RZE0 as seed ortholog is 100%.
Bootstrap support for F1SFP3 as seed ortholog is 100%.

Group of orthologs #3509. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.scrofa:19

F6QZH0              	100.00%		F1SUH3              	100.00%
F6WVT9              	28.33%		
Bootstrap support for F6QZH0 as seed ortholog is 99%.
Bootstrap support for F1SUH3 as seed ortholog is 78%.

Group of orthologs #3510. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.scrofa:206

F6RKI1              	100.00%		F1STI7              	100.00%
                    	       		I3LLZ7              	17.23%
Bootstrap support for F6RKI1 as seed ortholog is 100%.
Bootstrap support for F1STI7 as seed ortholog is 100%.

Group of orthologs #3511. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.scrofa:71

F7BGY2              	100.00%		I3L900              	100.00%
                    	       		F1RPD6              	22.47%
Bootstrap support for F7BGY2 as seed ortholog is 100%.
Bootstrap support for I3L900 as seed ortholog is 98%.

Group of orthologs #3512. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.scrofa:206

F6RU53              	100.00%		F1RVH1              	100.00%
Bootstrap support for F6RU53 as seed ortholog is 100%.
Bootstrap support for F1RVH1 as seed ortholog is 100%.

Group of orthologs #3513. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.scrofa:206

F6QWU8              	100.00%		F1S2V3              	100.00%
Bootstrap support for F6QWU8 as seed ortholog is 100%.
Bootstrap support for F1S2V3 as seed ortholog is 100%.

Group of orthologs #3514. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.scrofa:132

H2XLJ6              	100.00%		F1S1W6              	100.00%
Bootstrap support for H2XLJ6 as seed ortholog is 100%.
Bootstrap support for F1S1W6 as seed ortholog is 100%.

Group of orthologs #3515. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.scrofa:132

F7B6U2              	100.00%		F1SBB4              	100.00%
Bootstrap support for F7B6U2 as seed ortholog is 99%.
Bootstrap support for F1SBB4 as seed ortholog is 99%.

Group of orthologs #3516. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.scrofa:206

F7BN93              	100.00%		F1SEC3              	100.00%
Bootstrap support for F7BN93 as seed ortholog is 100%.
Bootstrap support for F1SEC3 as seed ortholog is 100%.

Group of orthologs #3517. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.scrofa:60

F6QQE0              	100.00%		I3LQ84              	100.00%
Bootstrap support for F6QQE0 as seed ortholog is 100%.
Bootstrap support for I3LQ84 as seed ortholog is 95%.

Group of orthologs #3518. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.scrofa:206

F6XHL9              	100.00%		I3L965              	100.00%
Bootstrap support for F6XHL9 as seed ortholog is 100%.
Bootstrap support for I3L965 as seed ortholog is 100%.

Group of orthologs #3519. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.scrofa:206

H2XXU4              	100.00%		F1S1B7              	100.00%
Bootstrap support for H2XXU4 as seed ortholog is 100%.
Bootstrap support for F1S1B7 as seed ortholog is 100%.

Group of orthologs #3520. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 S.scrofa:206

I6L2C8              	100.00%		I3LEI8              	100.00%
Bootstrap support for I6L2C8 as seed ortholog is 100%.
Bootstrap support for I3LEI8 as seed ortholog is 100%.

Group of orthologs #3521. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.scrofa:66

F6SD85              	100.00%		I3LQF8              	100.00%
                    	       		I3LFV4              	13.69%
                    	       		F1RWB7              	11.96%
                    	       		I3LCJ2              	9.71%
                    	       		F1SFU0              	9.53%
Bootstrap support for F6SD85 as seed ortholog is 100%.
Bootstrap support for I3LQF8 as seed ortholog is 91%.

Group of orthologs #3522. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.scrofa:109

F6WHA2              	100.00%		K7GSY3              	100.00%
                    	       		F1RXQ5              	76.55%
                    	       		I3LT73              	31.27%
                    	       		F1S1M4              	30.62%
Bootstrap support for F6WHA2 as seed ortholog is 99%.
Bootstrap support for K7GSY3 as seed ortholog is 99%.

Group of orthologs #3523. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.scrofa:68

F6VH27              	100.00%		F2Z552              	100.00%
                    	       		F1SV21              	64.16%
Bootstrap support for F6VH27 as seed ortholog is 99%.
Bootstrap support for F2Z552 as seed ortholog is 98%.

Group of orthologs #3524. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.scrofa:205

H2XRX1              	100.00%		F2Z5T9              	100.00%
                    	       		F1SSX8              	53.45%
Bootstrap support for H2XRX1 as seed ortholog is 100%.
Bootstrap support for F2Z5T9 as seed ortholog is 100%.

Group of orthologs #3525. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.scrofa:45

F6Q521              	100.00%		F1RLG5              	100.00%
Bootstrap support for F6Q521 as seed ortholog is 100%.
Bootstrap support for F1RLG5 as seed ortholog is 97%.

Group of orthologs #3526. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.scrofa:205

F6S9I2              	100.00%		F1RR38              	100.00%
Bootstrap support for F6S9I2 as seed ortholog is 100%.
Bootstrap support for F1RR38 as seed ortholog is 100%.

Group of orthologs #3527. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.scrofa:205

F6UBS8              	100.00%		F1SL47              	100.00%
Bootstrap support for F6UBS8 as seed ortholog is 100%.
Bootstrap support for F1SL47 as seed ortholog is 100%.

Group of orthologs #3528. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.scrofa:205

H2XK52              	100.00%		F1S3R0              	100.00%
Bootstrap support for H2XK52 as seed ortholog is 99%.
Bootstrap support for F1S3R0 as seed ortholog is 100%.

Group of orthologs #3529. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.scrofa:205

F6UIM4              	100.00%		I3LRU2              	100.00%
Bootstrap support for F6UIM4 as seed ortholog is 100%.
Bootstrap support for I3LRU2 as seed ortholog is 100%.

Group of orthologs #3530. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.scrofa:205

F6U8M8              	100.00%		I3LSS2              	100.00%
Bootstrap support for F6U8M8 as seed ortholog is 100%.
Bootstrap support for I3LSS2 as seed ortholog is 100%.

Group of orthologs #3531. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.scrofa:56

F6Z998              	100.00%		Q6QAP7              	100.00%
Bootstrap support for F6Z998 as seed ortholog is 100%.
Bootstrap support for Q6QAP7 as seed ortholog is 99%.

Group of orthologs #3532. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.scrofa:145

H2Y1D9              	100.00%		I3LI17              	100.00%
Bootstrap support for H2Y1D9 as seed ortholog is 100%.
Bootstrap support for I3LI17 as seed ortholog is 100%.

Group of orthologs #3533. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 S.scrofa:205

Q4H301              	100.00%		Q9TUB2              	100.00%
Bootstrap support for Q4H301 as seed ortholog is 100%.
Bootstrap support for Q9TUB2 as seed ortholog is 100%.

Group of orthologs #3534. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 S.scrofa:204

F7A4X9              	100.00%		F1RKF8              	100.00%
                    	       		F1RFI0              	17.37%
                    	       		F1RMZ2              	5.03%
Bootstrap support for F7A4X9 as seed ortholog is 100%.
Bootstrap support for F1RKF8 as seed ortholog is 100%.

Group of orthologs #3535. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 S.scrofa:204

F6UV64              	100.00%		F1S6Z2              	100.00%
                    	       		K7GP76              	7.69%
Bootstrap support for F6UV64 as seed ortholog is 100%.
Bootstrap support for F1S6Z2 as seed ortholog is 100%.

Group of orthologs #3536. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.scrofa:132

F6RYV9              	100.00%		F1SL48              	100.00%
                    	       		F1RIH7              	39.32%
Bootstrap support for F6RYV9 as seed ortholog is 99%.
Bootstrap support for F1SL48 as seed ortholog is 99%.

Group of orthologs #3537. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 S.scrofa:204

F6WX23              	100.00%		F1S1J9              	100.00%
Bootstrap support for F6WX23 as seed ortholog is 100%.
Bootstrap support for F1S1J9 as seed ortholog is 100%.

Group of orthologs #3538. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 S.scrofa:204

F6ZGV0              	100.00%		F1SD78              	100.00%
Bootstrap support for F6ZGV0 as seed ortholog is 100%.
Bootstrap support for F1SD78 as seed ortholog is 100%.

Group of orthologs #3539. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 S.scrofa:204

F6QAG3              	100.00%		I3LGD6              	100.00%
Bootstrap support for F6QAG3 as seed ortholog is 100%.
Bootstrap support for I3LGD6 as seed ortholog is 100%.

Group of orthologs #3540. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.scrofa:155

F6SPH4              	100.00%		I3LI59              	100.00%
Bootstrap support for F6SPH4 as seed ortholog is 100%.
Bootstrap support for I3LI59 as seed ortholog is 100%.

Group of orthologs #3541. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.scrofa:108

F6QI05              	100.00%		I3L7T6              	100.00%
                    	       		F2Z5L6              	38.16%
                    	       		F1RTQ7              	35.53%
                    	       		F2Z5L2              	32.89%
                    	       		F2Z5L5              	32.89%
                    	       		F1RPL3              	32.89%
                    	       		F1RPK0              	31.58%
Bootstrap support for F6QI05 as seed ortholog is 100%.
Bootstrap support for I3L7T6 as seed ortholog is 100%.

Group of orthologs #3542. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.scrofa:54

F6Q599              	100.00%		F1RVK3              	100.00%
                    	       		F1SEI4              	39.73%
Bootstrap support for F6Q599 as seed ortholog is 100%.
Bootstrap support for F1RVK3 as seed ortholog is 98%.

Group of orthologs #3543. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.scrofa:203

F7AKV8              	100.00%		F1SUQ7              	100.00%
                    	       		I3LKY7              	25.35%
Bootstrap support for F7AKV8 as seed ortholog is 100%.
Bootstrap support for F1SUQ7 as seed ortholog is 100%.

Group of orthologs #3544. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.scrofa:203

F6WC79              	100.00%		I3LTZ5              	100.00%
                    	       		F1SKR7              	80.20%
Bootstrap support for F6WC79 as seed ortholog is 100%.
Bootstrap support for I3LTZ5 as seed ortholog is 100%.

Group of orthologs #3545. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.scrofa:203

F6R255              	100.00%		F1RVF1              	100.00%
Bootstrap support for F6R255 as seed ortholog is 100%.
Bootstrap support for F1RVF1 as seed ortholog is 100%.

Group of orthologs #3546. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.scrofa:203

F6ZPT5              	100.00%		D2WL17              	100.00%
Bootstrap support for F6ZPT5 as seed ortholog is 100%.
Bootstrap support for D2WL17 as seed ortholog is 100%.

Group of orthologs #3547. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.scrofa:158

F6RCD1              	100.00%		F1S7J4              	100.00%
Bootstrap support for F6RCD1 as seed ortholog is 100%.
Bootstrap support for F1S7J4 as seed ortholog is 99%.

Group of orthologs #3548. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:121

F6W912              	100.00%		F1RSI6              	100.00%
Bootstrap support for F6W912 as seed ortholog is 99%.
Bootstrap support for F1RSI6 as seed ortholog is 99%.

Group of orthologs #3549. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.scrofa:203

H2XN47              	100.00%		F1RV31              	100.00%
Bootstrap support for H2XN47 as seed ortholog is 100%.
Bootstrap support for F1RV31 as seed ortholog is 100%.

Group of orthologs #3550. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.scrofa:203

F7BNX7              	100.00%		I3LIZ4              	100.00%
Bootstrap support for F7BNX7 as seed ortholog is 100%.
Bootstrap support for I3LIZ4 as seed ortholog is 100%.

Group of orthologs #3551. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.scrofa:116

H2Y3L9              	100.00%		F2Z5V3              	100.00%
Bootstrap support for H2Y3L9 as seed ortholog is 100%.
Bootstrap support for F2Z5V3 as seed ortholog is 100%.

Group of orthologs #3552. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 S.scrofa:203

H2Y1Y8              	100.00%		P62831              	100.00%
Bootstrap support for H2Y1Y8 as seed ortholog is 100%.
Bootstrap support for P62831 as seed ortholog is 100%.

Group of orthologs #3553. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 S.scrofa:202

F6UZ84              	100.00%		F1S531              	100.00%
                    	       		F1RZR7              	19.30%
                    	       		F1SME3              	14.26%
Bootstrap support for F6UZ84 as seed ortholog is 100%.
Bootstrap support for F1S531 as seed ortholog is 100%.

Group of orthologs #3554. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 S.scrofa:121

F6PYG2              	100.00%		F1SKW2              	100.00%
                    	       		I3LIP5              	88.03%
                    	       		F1S2Z8              	6.48%
Bootstrap support for F6PYG2 as seed ortholog is 100%.
Bootstrap support for F1SKW2 as seed ortholog is 99%.

Group of orthologs #3555. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:202

H2Y2Q4              	100.00%		F1S043              	100.00%
                    	       		F1RF02              	7.70%
Bootstrap support for H2Y2Q4 as seed ortholog is 66%.
Alternative seed ortholog is F6QKL4 (26 bits away from this cluster)
Bootstrap support for F1S043 as seed ortholog is 100%.

Group of orthologs #3556. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 S.scrofa:42

H2XU57              	100.00%		P62279              	100.00%
Q8I7D6              	97.98%		
Bootstrap support for H2XU57 as seed ortholog is 100%.
Bootstrap support for P62279 as seed ortholog is 99%.

Group of orthologs #3557. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 S.scrofa:202

F6R7Q8              	100.00%		D5K8A0              	100.00%
Bootstrap support for F6R7Q8 as seed ortholog is 100%.
Bootstrap support for D5K8A0 as seed ortholog is 100%.

Group of orthologs #3558. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 S.scrofa:202

F6QE53              	100.00%		F1SJY7              	100.00%
Bootstrap support for F6QE53 as seed ortholog is 100%.
Bootstrap support for F1SJY7 as seed ortholog is 100%.

Group of orthologs #3559. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 S.scrofa:202

F6Y4F7              	100.00%		F1S1J8              	100.00%
Bootstrap support for F6Y4F7 as seed ortholog is 100%.
Bootstrap support for F1S1J8 as seed ortholog is 100%.

Group of orthologs #3560. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.scrofa:72

H2XJV4              	100.00%		F1RT93              	100.00%
Bootstrap support for H2XJV4 as seed ortholog is 99%.
Bootstrap support for F1RT93 as seed ortholog is 99%.

Group of orthologs #3561. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 S.scrofa:202

F6SAX8              	100.00%		P46405              	100.00%
Bootstrap support for F6SAX8 as seed ortholog is 100%.
Bootstrap support for P46405 as seed ortholog is 100%.

Group of orthologs #3562. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 S.scrofa:37

H2XQP9              	100.00%		F1SQN0              	100.00%
Bootstrap support for H2XQP9 as seed ortholog is 100%.
Bootstrap support for F1SQN0 as seed ortholog is 74%.
Alternative seed ortholog is F1S3H5 (37 bits away from this cluster)

Group of orthologs #3563. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 S.scrofa:202

F6WJM1              	100.00%		I3LR73              	100.00%
Bootstrap support for F6WJM1 as seed ortholog is 100%.
Bootstrap support for I3LR73 as seed ortholog is 100%.

Group of orthologs #3564. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.scrofa:77

H2XWB4              	100.00%		F1SUA0              	100.00%
Bootstrap support for H2XWB4 as seed ortholog is 93%.
Bootstrap support for F1SUA0 as seed ortholog is 95%.

Group of orthologs #3565. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 S.scrofa:201

F6Y9G2              	100.00%		F1RKJ6              	100.00%
                    	       		F1RRK2              	14.79%
Bootstrap support for F6Y9G2 as seed ortholog is 100%.
Bootstrap support for F1RKJ6 as seed ortholog is 100%.

Group of orthologs #3566. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 S.scrofa:201

H2XMY6              	100.00%		E1AXT2              	100.00%
                    	       		A7LJT9              	44.83%
Bootstrap support for H2XMY6 as seed ortholog is 63%.
Alternative seed ortholog is F7B7A4 (23 bits away from this cluster)
Bootstrap support for E1AXT2 as seed ortholog is 100%.

Group of orthologs #3567. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 S.scrofa:201

F6QFI4              	100.00%		F1SUP2              	100.00%
Bootstrap support for F6QFI4 as seed ortholog is 100%.
Bootstrap support for F1SUP2 as seed ortholog is 100%.

Group of orthologs #3568. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 S.scrofa:131

H2XLX1              	100.00%		F1RPD2              	100.00%
Bootstrap support for H2XLX1 as seed ortholog is 94%.
Bootstrap support for F1RPD2 as seed ortholog is 99%.

Group of orthologs #3569. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 S.scrofa:201

H2XTF1              	100.00%		F1RIS8              	100.00%
Bootstrap support for H2XTF1 as seed ortholog is 100%.
Bootstrap support for F1RIS8 as seed ortholog is 100%.

Group of orthologs #3570. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 S.scrofa:201

F7BEK1              	100.00%		F1SE31              	100.00%
Bootstrap support for F7BEK1 as seed ortholog is 100%.
Bootstrap support for F1SE31 as seed ortholog is 100%.

Group of orthologs #3571. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 S.scrofa:201

H2XNC6              	100.00%		F1S924              	100.00%
Bootstrap support for H2XNC6 as seed ortholog is 100%.
Bootstrap support for F1S924 as seed ortholog is 100%.

Group of orthologs #3572. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:130

F6ZIC6              	100.00%		I3L574              	100.00%
Bootstrap support for F6ZIC6 as seed ortholog is 99%.
Bootstrap support for I3L574 as seed ortholog is 100%.

Group of orthologs #3573. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 S.scrofa:119

F6ZAE1              	100.00%		I3LRD5              	100.00%
Bootstrap support for F6ZAE1 as seed ortholog is 97%.
Bootstrap support for I3LRD5 as seed ortholog is 100%.

Group of orthologs #3574. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 S.scrofa:201

H2Y1G6              	100.00%		K7GL03              	100.00%
Bootstrap support for H2Y1G6 as seed ortholog is 100%.
Bootstrap support for K7GL03 as seed ortholog is 100%.

Group of orthologs #3575. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.scrofa:113

F6R955              	100.00%		F1RRT2              	100.00%
                    	       		F1SNW4              	62.26%
                    	       		A1XQT6              	36.32%
                    	       		P60662              	19.34%
                    	       		F1SLZ3              	6.13%
Bootstrap support for F6R955 as seed ortholog is 99%.
Bootstrap support for F1RRT2 as seed ortholog is 100%.

Group of orthologs #3576. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 S.scrofa:5

F6S9V9              	100.00%		I3L620              	100.00%
                    	       		F1S6D6              	14.45%
                    	       		I3LST5              	13.78%
Bootstrap support for F6S9V9 as seed ortholog is 74%.
Alternative seed ortholog is F6TQ36 (39 bits away from this cluster)
Bootstrap support for I3L620 as seed ortholog is 47%.
Alternative seed ortholog is F1SGB1 (5 bits away from this cluster)

Group of orthologs #3577. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.scrofa:95

F7BLB2              	100.00%		F1RJL1              	100.00%
F6UHP1              	13.15%		
Bootstrap support for F7BLB2 as seed ortholog is 100%.
Bootstrap support for F1RJL1 as seed ortholog is 99%.

Group of orthologs #3578. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.scrofa:116

F6RG85              	100.00%		F1SNT4              	100.00%
                    	       		I3LDV4              	70.57%
Bootstrap support for F6RG85 as seed ortholog is 100%.
Bootstrap support for F1SNT4 as seed ortholog is 99%.

Group of orthologs #3579. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.scrofa:200

F6RST4              	100.00%		K7GM54              	100.00%
                    	       		F1RPT1              	12.32%
Bootstrap support for F6RST4 as seed ortholog is 100%.
Bootstrap support for K7GM54 as seed ortholog is 100%.

Group of orthologs #3580. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.scrofa:200

F6ZTN4              	100.00%		I3LS43              	100.00%
                    	       		F1RR93              	76.87%
Bootstrap support for F6ZTN4 as seed ortholog is 100%.
Bootstrap support for I3LS43 as seed ortholog is 100%.

Group of orthologs #3581. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.scrofa:200

Q4H3N0              	100.00%		I3LQ05              	100.00%
                    	       		I3L8C1              	17.90%
Bootstrap support for Q4H3N0 as seed ortholog is 100%.
Bootstrap support for I3LQ05 as seed ortholog is 100%.

Group of orthologs #3582. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.scrofa:200

F6R1F8              	100.00%		F1RGT9              	100.00%
Bootstrap support for F6R1F8 as seed ortholog is 100%.
Bootstrap support for F1RGT9 as seed ortholog is 100%.

Group of orthologs #3583. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.scrofa:200

F6X073              	100.00%		A6N8P5              	100.00%
Bootstrap support for F6X073 as seed ortholog is 100%.
Bootstrap support for A6N8P5 as seed ortholog is 100%.

Group of orthologs #3584. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.scrofa:200

H2XM10              	100.00%		F1RJQ8              	100.00%
Bootstrap support for H2XM10 as seed ortholog is 100%.
Bootstrap support for F1RJQ8 as seed ortholog is 100%.

Group of orthologs #3585. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.scrofa:128

F6Q2W2              	100.00%		I3LPC2              	100.00%
Bootstrap support for F6Q2W2 as seed ortholog is 100%.
Bootstrap support for I3LPC2 as seed ortholog is 100%.

Group of orthologs #3586. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.scrofa:200

F6QVI1              	100.00%		I3LND2              	100.00%
Bootstrap support for F6QVI1 as seed ortholog is 100%.
Bootstrap support for I3LND2 as seed ortholog is 100%.

Group of orthologs #3587. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.scrofa:200

H2XZH2              	100.00%		F1S9G6              	100.00%
Bootstrap support for H2XZH2 as seed ortholog is 100%.
Bootstrap support for F1S9G6 as seed ortholog is 100%.

Group of orthologs #3588. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.scrofa:200

H2Y0C1              	100.00%		F1SIF0              	100.00%
Bootstrap support for H2Y0C1 as seed ortholog is 100%.
Bootstrap support for F1SIF0 as seed ortholog is 100%.

Group of orthologs #3589. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 S.scrofa:93

H2XK11              	100.00%		I3LJ08              	100.00%
Bootstrap support for H2XK11 as seed ortholog is 99%.
Bootstrap support for I3LJ08 as seed ortholog is 99%.

Group of orthologs #3590. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 S.scrofa:200

H2XR40              	100.00%		I3LH19              	100.00%
Bootstrap support for H2XR40 as seed ortholog is 100%.
Bootstrap support for I3LH19 as seed ortholog is 100%.

Group of orthologs #3591. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 S.scrofa:49

F6SDR2              	100.00%		F1S5G5              	100.00%
                    	       		I3LGC1              	7.06%
                    	       		F1RSY1              	5.76%
Bootstrap support for F6SDR2 as seed ortholog is 93%.
Bootstrap support for F1S5G5 as seed ortholog is 93%.

Group of orthologs #3592. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:65

H2Y2B7              	100.00%		F1SRU0              	100.00%
                    	       		F1SRT9              	29.99%
                    	       		F1RIT1              	5.68%
Bootstrap support for H2Y2B7 as seed ortholog is 97%.
Bootstrap support for F1SRU0 as seed ortholog is 90%.

Group of orthologs #3593. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.scrofa:64

F6SQ79              	100.00%		F1SKF4              	100.00%
                    	       		I3LJN8              	100.00%
Bootstrap support for F6SQ79 as seed ortholog is 100%.
Bootstrap support for F1SKF4 as seed ortholog is 98%.
Bootstrap support for I3LJN8 as seed ortholog is 97%.

Group of orthologs #3594. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.scrofa:199

F7AFW8              	100.00%		Q33BP8              	100.00%
                    	       		I3LTD2              	16.60%
Bootstrap support for F7AFW8 as seed ortholog is 100%.
Bootstrap support for Q33BP8 as seed ortholog is 100%.

Group of orthologs #3595. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 S.scrofa:113

H2XV14              	100.00%		I3LRD6              	100.00%
                    	       		Q29257              	5.31%
Bootstrap support for H2XV14 as seed ortholog is 100%.
Bootstrap support for I3LRD6 as seed ortholog is 99%.

Group of orthologs #3596. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.scrofa:199

F6SJ18              	100.00%		F1S456              	100.00%
Bootstrap support for F6SJ18 as seed ortholog is 100%.
Bootstrap support for F1S456 as seed ortholog is 100%.

Group of orthologs #3597. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:199

F7A027              	100.00%		F1RR77              	100.00%
Bootstrap support for F7A027 as seed ortholog is 98%.
Bootstrap support for F1RR77 as seed ortholog is 100%.

Group of orthologs #3598. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.scrofa:199

F6QSH0              	100.00%		F1SU46              	100.00%
Bootstrap support for F6QSH0 as seed ortholog is 100%.
Bootstrap support for F1SU46 as seed ortholog is 100%.

Group of orthologs #3599. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.scrofa:199

F6WNU7              	100.00%		I3LGS6              	100.00%
Bootstrap support for F6WNU7 as seed ortholog is 100%.
Bootstrap support for I3LGS6 as seed ortholog is 100%.

Group of orthologs #3600. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 S.scrofa:4

H2XVX4              	100.00%		Q95250              	100.00%
Bootstrap support for H2XVX4 as seed ortholog is 100%.
Bootstrap support for Q95250 as seed ortholog is 44%.
Alternative seed ortholog is A9LM01 (4 bits away from this cluster)

Group of orthologs #3601. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:198

H2XKU8              	100.00%		I3LHH5              	100.00%
                    	       		F1RZK7              	24.60%
                    	       		F1RPF0              	9.20%
                    	       		F1SS44              	7.82%
                    	       		I3LSP5              	7.36%
Bootstrap support for H2XKU8 as seed ortholog is 98%.
Bootstrap support for I3LHH5 as seed ortholog is 100%.

Group of orthologs #3602. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 S.scrofa:21

H2Y0D6              	100.00%		F1RSW9              	100.00%
F6UBJ9              	10.40%		F1STM7              	16.58%
                    	       		F1S0G6              	10.62%
Bootstrap support for H2Y0D6 as seed ortholog is 85%.
Bootstrap support for F1RSW9 as seed ortholog is 78%.

Group of orthologs #3603. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.scrofa:198

F6R0P0              	100.00%		A1XQU9              	100.00%
                    	       		F1SMQ1              	41.03%
Bootstrap support for F6R0P0 as seed ortholog is 100%.
Bootstrap support for A1XQU9 as seed ortholog is 100%.

Group of orthologs #3604. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.scrofa:198

F6U3K8              	100.00%		F1SEJ2              	100.00%
                    	       		I3L7G5              	22.99%
Bootstrap support for F6U3K8 as seed ortholog is 100%.
Bootstrap support for F1SEJ2 as seed ortholog is 100%.

Group of orthologs #3605. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.scrofa:198

F6SHF2              	100.00%		I3L9S3              	100.00%
                    	       		F1SNK8              	5.91%
Bootstrap support for F6SHF2 as seed ortholog is 100%.
Bootstrap support for I3L9S3 as seed ortholog is 100%.

Group of orthologs #3606. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.scrofa:8

Q4H3L6              	100.00%		F1RHL1              	100.00%
                    	       		I3LLZ4              	21.25%
Bootstrap support for Q4H3L6 as seed ortholog is 100%.
Bootstrap support for F1RHL1 as seed ortholog is 66%.
Alternative seed ortholog is F1RHL0 (8 bits away from this cluster)

Group of orthologs #3607. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.scrofa:198

F6YWK0              	100.00%		F1SV55              	100.00%
                    	       		F1SE79              	50.34%
Bootstrap support for F6YWK0 as seed ortholog is 100%.
Bootstrap support for F1SV55 as seed ortholog is 100%.

Group of orthologs #3608. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.scrofa:139

Q4H2N7              	100.00%		F1SHK3              	100.00%
                    	       		F1SAU4              	19.13%
Bootstrap support for Q4H2N7 as seed ortholog is 100%.
Bootstrap support for F1SHK3 as seed ortholog is 99%.

Group of orthologs #3609. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.scrofa:198

Q8HIN6              	100.00%		P50667              	100.00%
                    	       		Q69GF7              	100.00%
Bootstrap support for Q8HIN6 as seed ortholog is 100%.
Bootstrap support for P50667 as seed ortholog is 100%.
Bootstrap support for Q69GF7 as seed ortholog is 100%.

Group of orthologs #3610. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.scrofa:198

F7ATN8              	100.00%		F1RHM8              	100.00%
Bootstrap support for F7ATN8 as seed ortholog is 99%.
Bootstrap support for F1RHM8 as seed ortholog is 100%.

Group of orthologs #3611. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.scrofa:77

F6SV73              	100.00%		F1ST68              	100.00%
Bootstrap support for F6SV73 as seed ortholog is 100%.
Bootstrap support for F1ST68 as seed ortholog is 99%.

Group of orthologs #3612. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:86

F6WJS0              	100.00%		I3L8Q5              	100.00%
Bootstrap support for F6WJS0 as seed ortholog is 100%.
Bootstrap support for I3L8Q5 as seed ortholog is 99%.

Group of orthologs #3613. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.scrofa:198

H2XUI3              	100.00%		F1S8Y4              	100.00%
Bootstrap support for H2XUI3 as seed ortholog is 100%.
Bootstrap support for F1S8Y4 as seed ortholog is 100%.

Group of orthologs #3614. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 S.scrofa:198

F6YZE6              	100.00%		I3LTB0              	100.00%
Bootstrap support for F6YZE6 as seed ortholog is 100%.
Bootstrap support for I3LTB0 as seed ortholog is 100%.

Group of orthologs #3615. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.scrofa:112

F6QR63              	100.00%		Q27HK4              	100.00%
                    	       		F1RF29              	19.69%
                    	       		I3LRA8              	17.90%
Bootstrap support for F6QR63 as seed ortholog is 100%.
Bootstrap support for Q27HK4 as seed ortholog is 99%.

Group of orthologs #3616. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.scrofa:197

F6UMA7              	100.00%		F1SMJ4              	100.00%
                    	       		F1S7A3              	8.70%
Bootstrap support for F6UMA7 as seed ortholog is 100%.
Bootstrap support for F1SMJ4 as seed ortholog is 100%.

Group of orthologs #3617. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.scrofa:197

Q4H3A1              	100.00%		K7GRG2              	100.00%
                    	       		P56432              	95.92%
Bootstrap support for Q4H3A1 as seed ortholog is 100%.
Bootstrap support for K7GRG2 as seed ortholog is 100%.

Group of orthologs #3618. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.scrofa:197

F6PZL2              	100.00%		F1RRM3              	100.00%
Bootstrap support for F6PZL2 as seed ortholog is 100%.
Bootstrap support for F1RRM3 as seed ortholog is 100%.

Group of orthologs #3619. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.scrofa:197

F6RL73              	100.00%		F1RTY8              	100.00%
Bootstrap support for F6RL73 as seed ortholog is 100%.
Bootstrap support for F1RTY8 as seed ortholog is 100%.

Group of orthologs #3620. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.scrofa:197

F6UBQ5              	100.00%		F1RLE1              	100.00%
Bootstrap support for F6UBQ5 as seed ortholog is 100%.
Bootstrap support for F1RLE1 as seed ortholog is 100%.

Group of orthologs #3621. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.scrofa:197

F6QAP0              	100.00%		F1S449              	100.00%
Bootstrap support for F6QAP0 as seed ortholog is 100%.
Bootstrap support for F1S449 as seed ortholog is 100%.

Group of orthologs #3622. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.scrofa:197

F6UTR1              	100.00%		F1SI69              	100.00%
Bootstrap support for F6UTR1 as seed ortholog is 100%.
Bootstrap support for F1SI69 as seed ortholog is 100%.

Group of orthologs #3623. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.scrofa:197

F7AZA1              	100.00%		I3L8T8              	100.00%
Bootstrap support for F7AZA1 as seed ortholog is 100%.
Bootstrap support for I3L8T8 as seed ortholog is 100%.

Group of orthologs #3624. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.scrofa:197

H2Y3G2              	100.00%		F1SFF6              	100.00%
Bootstrap support for H2Y3G2 as seed ortholog is 100%.
Bootstrap support for F1SFF6 as seed ortholog is 100%.

Group of orthologs #3625. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.scrofa:197

H2Y3Q9              	100.00%		F1SM41              	100.00%
Bootstrap support for H2Y3Q9 as seed ortholog is 100%.
Bootstrap support for F1SM41 as seed ortholog is 100%.

Group of orthologs #3626. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 S.scrofa:42

H2Y1H3              	100.00%		F1SR02              	100.00%
Bootstrap support for H2Y1H3 as seed ortholog is 100%.
Bootstrap support for F1SR02 as seed ortholog is 99%.

Group of orthologs #3627. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:196

F6WT98              	100.00%		B3GQS6              	100.00%
                    	       		F1S5J6              	27.93%
                    	       		F1SVA7              	20.12%
Bootstrap support for F6WT98 as seed ortholog is 99%.
Bootstrap support for B3GQS6 as seed ortholog is 100%.

Group of orthologs #3628. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 S.scrofa:196

F6RVB8              	100.00%		F1S718              	100.00%
Bootstrap support for F6RVB8 as seed ortholog is 100%.
Bootstrap support for F1S718 as seed ortholog is 100%.

Group of orthologs #3629. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 S.scrofa:196

F6QGB8              	100.00%		F2Z545              	100.00%
Bootstrap support for F6QGB8 as seed ortholog is 100%.
Bootstrap support for F2Z545 as seed ortholog is 100%.

Group of orthologs #3630. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 S.scrofa:196

H2XQB5              	100.00%		F1RNH2              	100.00%
Bootstrap support for H2XQB5 as seed ortholog is 100%.
Bootstrap support for F1RNH2 as seed ortholog is 100%.

Group of orthologs #3631. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 S.scrofa:196

F6V6C3              	100.00%		F1SNG0              	100.00%
Bootstrap support for F6V6C3 as seed ortholog is 82%.
Bootstrap support for F1SNG0 as seed ortholog is 100%.

Group of orthologs #3632. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 S.scrofa:196

F6ZUR4              	100.00%		F1S9P3              	100.00%
Bootstrap support for F6ZUR4 as seed ortholog is 100%.
Bootstrap support for F1S9P3 as seed ortholog is 100%.

Group of orthologs #3633. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 S.scrofa:196

F7A4X2              	100.00%		F1SSS5              	100.00%
Bootstrap support for F7A4X2 as seed ortholog is 100%.
Bootstrap support for F1SSS5 as seed ortholog is 100%.

Group of orthologs #3634. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.scrofa:142

F6WG20              	100.00%		I3LCX7              	100.00%
Bootstrap support for F6WG20 as seed ortholog is 99%.
Bootstrap support for I3LCX7 as seed ortholog is 100%.

Group of orthologs #3635. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 S.scrofa:196

F6ZE60              	100.00%		I3LFB6              	100.00%
Bootstrap support for F6ZE60 as seed ortholog is 100%.
Bootstrap support for I3LFB6 as seed ortholog is 100%.

Group of orthologs #3636. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.scrofa:156

H2XUW4              	100.00%		F1SMR7              	100.00%
Bootstrap support for H2XUW4 as seed ortholog is 99%.
Bootstrap support for F1SMR7 as seed ortholog is 99%.

Group of orthologs #3637. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:196

H2XQY5              	100.00%		F1SUL6              	100.00%
Bootstrap support for H2XQY5 as seed ortholog is 89%.
Bootstrap support for F1SUL6 as seed ortholog is 100%.

Group of orthologs #3638. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:195

F6S8N1              	100.00%		F1ST61              	100.00%
                    	       		F1S526              	17.66%
                    	       		I3LM74              	7.17%
Bootstrap support for F6S8N1 as seed ortholog is 100%.
Bootstrap support for F1ST61 as seed ortholog is 100%.

Group of orthologs #3639. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:195

F6XC20              	100.00%		I3LAV9              	100.00%
                    	       		F1REZ8              	13.55%
                    	       		I3LLG8              	5.73%
Bootstrap support for F6XC20 as seed ortholog is 100%.
Bootstrap support for I3LAV9 as seed ortholog is 100%.

Group of orthologs #3640. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.scrofa:119

F6T5I8              	100.00%		Q8WNR0              	100.00%
                    	       		I3LH68              	97.41%
                    	       		I3LR16              	52.85%
Bootstrap support for F6T5I8 as seed ortholog is 100%.
Bootstrap support for Q8WNR0 as seed ortholog is 100%.

Group of orthologs #3641. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.scrofa:57

F6XEB9              	100.00%		Q95ND5              	100.00%
F6U351              	14.49%		F1RSZ5              	56.45%
Bootstrap support for F6XEB9 as seed ortholog is 98%.
Bootstrap support for Q95ND5 as seed ortholog is 95%.

Group of orthologs #3642. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:66

F6T302              	100.00%		B1PXF9              	100.00%
                    	       		I3LG51              	31.17%
Bootstrap support for F6T302 as seed ortholog is 100%.
Bootstrap support for B1PXF9 as seed ortholog is 99%.

Group of orthologs #3643. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:195

F6Y043              	100.00%		I3L6K4              	100.00%
                    	       		I3LNB0              	31.63%
Bootstrap support for F6Y043 as seed ortholog is 100%.
Bootstrap support for I3L6K4 as seed ortholog is 100%.

Group of orthologs #3644. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:195

H2XLG0              	100.00%		F2Z5D1              	100.00%
                    	       		I3L831              	27.10%
Bootstrap support for H2XLG0 as seed ortholog is 100%.
Bootstrap support for F2Z5D1 as seed ortholog is 100%.

Group of orthologs #3645. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:86

Q4H303              	100.00%		F1SIW9              	100.00%
                    	       		F1SSM3              	26.48%
Bootstrap support for Q4H303 as seed ortholog is 100%.
Bootstrap support for F1SIW9 as seed ortholog is 99%.

Group of orthologs #3646. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:195

F6QZF6              	100.00%		F1RS78              	100.00%
Bootstrap support for F6QZF6 as seed ortholog is 100%.
Bootstrap support for F1RS78 as seed ortholog is 100%.

Group of orthologs #3647. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:34

F6TXM9              	100.00%		F1RYY8              	100.00%
Bootstrap support for F6TXM9 as seed ortholog is 99%.
Bootstrap support for F1RYY8 as seed ortholog is 84%.

Group of orthologs #3648. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:195

F6UU76              	100.00%		F1S286              	100.00%
Bootstrap support for F6UU76 as seed ortholog is 100%.
Bootstrap support for F1S286 as seed ortholog is 100%.

Group of orthologs #3649. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:195

H2XR58              	100.00%		F1RR05              	100.00%
Bootstrap support for H2XR58 as seed ortholog is 100%.
Bootstrap support for F1RR05 as seed ortholog is 100%.

Group of orthologs #3650. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.scrofa:141

F6VRL4              	100.00%		I3L9K9              	100.00%
Bootstrap support for F6VRL4 as seed ortholog is 99%.
Bootstrap support for I3L9K9 as seed ortholog is 100%.

Group of orthologs #3651. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:195

F6WFE5              	100.00%		I3LA68              	100.00%
Bootstrap support for F6WFE5 as seed ortholog is 100%.
Bootstrap support for I3LA68 as seed ortholog is 100%.

Group of orthologs #3652. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:195

F6SSG7              	100.00%		I3LPD4              	100.00%
Bootstrap support for F6SSG7 as seed ortholog is 100%.
Bootstrap support for I3LPD4 as seed ortholog is 100%.

Group of orthologs #3653. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:98

H2Y0R5              	100.00%		F1SEH5              	100.00%
Bootstrap support for H2Y0R5 as seed ortholog is 100%.
Bootstrap support for F1SEH5 as seed ortholog is 99%.

Group of orthologs #3654. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 S.scrofa:136

Q1RPU6              	100.00%		F2Z4X7              	100.00%
Bootstrap support for Q1RPU6 as seed ortholog is 100%.
Bootstrap support for F2Z4X7 as seed ortholog is 100%.

Group of orthologs #3655. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:118

F6Y4J7              	100.00%		F1S8Y0              	100.00%
                    	       		Q865U8              	16.34%
                    	       		F1STC8              	7.10%
Bootstrap support for F6Y4J7 as seed ortholog is 100%.
Bootstrap support for F1S8Y0 as seed ortholog is 99%.

Group of orthologs #3656. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 S.scrofa:21

F6S8X6              	100.00%		P67985              	100.00%
F6TP12              	100.00%		
Bootstrap support for F6S8X6 as seed ortholog is 100%.
Bootstrap support for F6TP12 as seed ortholog is 100%.
Bootstrap support for P67985 as seed ortholog is 72%.
Alternative seed ortholog is I3LP62 (21 bits away from this cluster)

Group of orthologs #3657. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.scrofa:194

H2XLW2              	100.00%		I3L7T2              	100.00%
                    	       		I3L657              	35.82%
Bootstrap support for H2XLW2 as seed ortholog is 94%.
Bootstrap support for I3L7T2 as seed ortholog is 100%.

Group of orthologs #3658. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 S.scrofa:194

F7AR28              	100.00%		I3LGN2              	100.00%
                    	       		F1RF05              	11.50%
Bootstrap support for F7AR28 as seed ortholog is 100%.
Bootstrap support for I3LGN2 as seed ortholog is 100%.

Group of orthologs #3659. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 S.scrofa:194

F6W6D7              	100.00%		F1REW6              	100.00%
Bootstrap support for F6W6D7 as seed ortholog is 100%.
Bootstrap support for F1REW6 as seed ortholog is 100%.

Group of orthologs #3660. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 S.scrofa:142

F6SBJ2              	100.00%		F1S538              	100.00%
Bootstrap support for F6SBJ2 as seed ortholog is 98%.
Bootstrap support for F1S538 as seed ortholog is 100%.

Group of orthologs #3661. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 S.scrofa:194

F6ZY66              	100.00%		F1RWA0              	100.00%
Bootstrap support for F6ZY66 as seed ortholog is 100%.
Bootstrap support for F1RWA0 as seed ortholog is 100%.

Group of orthologs #3662. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 S.scrofa:194

F6RNL8              	100.00%		I3LRA1              	100.00%
Bootstrap support for F6RNL8 as seed ortholog is 100%.
Bootstrap support for I3LRA1 as seed ortholog is 100%.

Group of orthologs #3663. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 S.scrofa:194

H2XLK9              	100.00%		F2Z5R8              	100.00%
Bootstrap support for H2XLK9 as seed ortholog is 100%.
Bootstrap support for F2Z5R8 as seed ortholog is 100%.

Group of orthologs #3664. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 S.scrofa:85

F7ABY6              	100.00%		I3LDE6              	100.00%
Bootstrap support for F7ABY6 as seed ortholog is 100%.
Bootstrap support for I3LDE6 as seed ortholog is 99%.

Group of orthologs #3665. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.scrofa:25

F6XTS5              	100.00%		I3LIX8              	100.00%
F7AJY7              	100.00%		F1RUS1              	100.00%
                    	       		F1RUS4              	26.28%
                    	       		F1RVE5              	25.69%
                    	       		I3LGT8              	25.69%
                    	       		F1RUS3              	24.82%
                    	       		F1RUS5              	23.94%
Bootstrap support for F6XTS5 as seed ortholog is 90%.
Bootstrap support for F7AJY7 as seed ortholog is 69%.
Alternative seed ortholog is F6YJ36 (49 bits away from this cluster)
Bootstrap support for I3LIX8 as seed ortholog is 76%.
Bootstrap support for F1RUS1 as seed ortholog is 63%.
Alternative seed ortholog is F1SAM4 (25 bits away from this cluster)

Group of orthologs #3666. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:193

F6VRV5              	100.00%		Q75ZZ6              	100.00%
                    	       		Q75NG9              	40.73%
                    	       		I3LS66              	40.12%
Bootstrap support for F6VRV5 as seed ortholog is 100%.
Bootstrap support for Q75ZZ6 as seed ortholog is 100%.

Group of orthologs #3667. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:61

H2XYF5              	100.00%		D2KQR0              	100.00%
                    	       		D7RA29              	21.57%
Bootstrap support for H2XYF5 as seed ortholog is 100%.
Bootstrap support for D2KQR0 as seed ortholog is 99%.

Group of orthologs #3668. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:193

F6TN99              	100.00%		I3L8R2              	100.00%
                    	       		F1S090              	7.12%
Bootstrap support for F6TN99 as seed ortholog is 100%.
Bootstrap support for I3L8R2 as seed ortholog is 100%.

Group of orthologs #3669. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 S.scrofa:72

H2XMU3              	100.00%		I3LCK1              	100.00%
                    	       		K7GN20              	7.35%
Bootstrap support for H2XMU3 as seed ortholog is 92%.
Bootstrap support for I3LCK1 as seed ortholog is 96%.

Group of orthologs #3670. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:193

F6UQ68              	100.00%		F1RF07              	100.00%
Bootstrap support for F6UQ68 as seed ortholog is 100%.
Bootstrap support for F1RF07 as seed ortholog is 100%.

Group of orthologs #3671. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.scrofa:39

F6ZJ76              	100.00%		F1RIJ6              	100.00%
Bootstrap support for F6ZJ76 as seed ortholog is 69%.
Alternative seed ortholog is F6TCA9 (19 bits away from this cluster)
Bootstrap support for F1RIJ6 as seed ortholog is 98%.

Group of orthologs #3672. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:193

F6UVN7              	100.00%		F1S4G6              	100.00%
Bootstrap support for F6UVN7 as seed ortholog is 100%.
Bootstrap support for F1S4G6 as seed ortholog is 100%.

Group of orthologs #3673. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:193

F6W2W3              	100.00%		F1SH93              	100.00%
Bootstrap support for F6W2W3 as seed ortholog is 100%.
Bootstrap support for F1SH93 as seed ortholog is 100%.

Group of orthologs #3674. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:193

H2XMW5              	100.00%		F1RRT6              	100.00%
Bootstrap support for H2XMW5 as seed ortholog is 100%.
Bootstrap support for F1RRT6 as seed ortholog is 100%.

Group of orthologs #3675. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:193

F6T3M6              	100.00%		I3L601              	100.00%
Bootstrap support for F6T3M6 as seed ortholog is 100%.
Bootstrap support for I3L601 as seed ortholog is 100%.

Group of orthologs #3676. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:193

F6ZFY8              	100.00%		F1SFN2              	100.00%
Bootstrap support for F6ZFY8 as seed ortholog is 100%.
Bootstrap support for F1SFN2 as seed ortholog is 100%.

Group of orthologs #3677. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:193

F6TFV0              	100.00%		I3LBM1              	100.00%
Bootstrap support for F6TFV0 as seed ortholog is 100%.
Bootstrap support for I3LBM1 as seed ortholog is 100%.

Group of orthologs #3678. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:193

H2Y320              	100.00%		F1RIS6              	100.00%
Bootstrap support for H2Y320 as seed ortholog is 100%.
Bootstrap support for F1RIS6 as seed ortholog is 100%.

Group of orthologs #3679. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:193

F6RQ34              	100.00%		I3LHS7              	100.00%
Bootstrap support for F6RQ34 as seed ortholog is 100%.
Bootstrap support for I3LHS7 as seed ortholog is 100%.

Group of orthologs #3680. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:92

F6XTM9              	100.00%		I3L9I0              	100.00%
Bootstrap support for F6XTM9 as seed ortholog is 100%.
Bootstrap support for I3L9I0 as seed ortholog is 99%.

Group of orthologs #3681. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 S.scrofa:137

F6ZBE4              	100.00%		I3LIY6              	100.00%
Bootstrap support for F6ZBE4 as seed ortholog is 100%.
Bootstrap support for I3LIY6 as seed ortholog is 99%.

Group of orthologs #3682. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 S.scrofa:131

H2XSQ8              	100.00%		F2Z5Q2              	100.00%
Bootstrap support for H2XSQ8 as seed ortholog is 100%.
Bootstrap support for F2Z5Q2 as seed ortholog is 100%.

Group of orthologs #3683. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.scrofa:192

F6QNF1              	100.00%		F1RUY2              	100.00%
                    	       		F1RW57              	19.53%
                    	       		I3LC19              	5.95%
Bootstrap support for F6QNF1 as seed ortholog is 100%.
Bootstrap support for F1RUY2 as seed ortholog is 100%.

Group of orthologs #3684. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 S.scrofa:103

F6RBZ6              	100.00%		F1CK19              	100.00%
                    	       		F1SJJ2              	25.60%
Bootstrap support for F6RBZ6 as seed ortholog is 97%.
Bootstrap support for F1CK19 as seed ortholog is 95%.

Group of orthologs #3685. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.scrofa:192

F6X4A0              	100.00%		F1SF93              	100.00%
                    	       		F1SNG9              	16.26%
Bootstrap support for F6X4A0 as seed ortholog is 100%.
Bootstrap support for F1SF93 as seed ortholog is 100%.

Group of orthologs #3686. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.scrofa:192

F6ZD22              	100.00%		F1S8H7              	100.00%
                    	       		F1RXF6              	24.18%
Bootstrap support for F6ZD22 as seed ortholog is 100%.
Bootstrap support for F1S8H7 as seed ortholog is 100%.

Group of orthologs #3687. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.scrofa:192

H2XN33              	100.00%		I3LF64              	100.00%
                    	       		I3LMZ7              	58.16%
Bootstrap support for H2XN33 as seed ortholog is 100%.
Bootstrap support for I3LF64 as seed ortholog is 100%.

Group of orthologs #3688. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.scrofa:145

H2XUJ8              	100.00%		I3LKE0              	100.00%
H2XQM6              	12.19%		
Bootstrap support for H2XUJ8 as seed ortholog is 99%.
Bootstrap support for I3LKE0 as seed ortholog is 100%.

Group of orthologs #3689. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.scrofa:192

F6PNP3              	100.00%		F2Z5W3              	100.00%
Bootstrap support for F6PNP3 as seed ortholog is 100%.
Bootstrap support for F2Z5W3 as seed ortholog is 100%.

Group of orthologs #3690. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.scrofa:192

F7BK44              	100.00%		F1RZ28              	100.00%
Bootstrap support for F7BK44 as seed ortholog is 100%.
Bootstrap support for F1RZ28 as seed ortholog is 100%.

Group of orthologs #3691. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 S.scrofa:192

F6V386              	100.00%		F1SSR7              	100.00%
Bootstrap support for F6V386 as seed ortholog is 97%.
Bootstrap support for F1SSR7 as seed ortholog is 100%.

Group of orthologs #3692. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.scrofa:192

H2XZ67              	100.00%		F1RX91              	100.00%
Bootstrap support for H2XZ67 as seed ortholog is 100%.
Bootstrap support for F1RX91 as seed ortholog is 100%.

Group of orthologs #3693. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.scrofa:58

Q2PEE2              	100.00%		F1SB44              	100.00%
Bootstrap support for Q2PEE2 as seed ortholog is 100%.
Bootstrap support for F1SB44 as seed ortholog is 99%.

Group of orthologs #3694. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.scrofa:192

H2XU65              	100.00%		F1ST67              	100.00%
Bootstrap support for H2XU65 as seed ortholog is 100%.
Bootstrap support for F1ST67 as seed ortholog is 100%.

Group of orthologs #3695. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 S.scrofa:192

Q4H2R5              	100.00%		K7GKT6              	100.00%
Bootstrap support for Q4H2R5 as seed ortholog is 100%.
Bootstrap support for K7GKT6 as seed ortholog is 100%.

Group of orthologs #3696. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.scrofa:191

F7A786              	100.00%		I3LHI3              	100.00%
F7A0S5              	100.00%		F1SKD0              	100.00%
F6U621              	57.10%		F1SKD1              	6.12%
Bootstrap support for F7A786 as seed ortholog is 100%.
Bootstrap support for F7A0S5 as seed ortholog is 100%.
Bootstrap support for I3LHI3 as seed ortholog is 100%.
Bootstrap support for F1SKD0 as seed ortholog is 100%.

Group of orthologs #3697. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.scrofa:83

F6SU13              	100.00%		Q6QAT0              	100.00%
                    	       		F1SQI2              	50.00%
                    	       		F1SPL8              	26.83%
                    	       		I3LNB9              	13.41%
Bootstrap support for F6SU13 as seed ortholog is 100%.
Bootstrap support for Q6QAT0 as seed ortholog is 99%.

Group of orthologs #3698. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.scrofa:191

F6W7Q3              	100.00%		P62901              	100.00%
                    	       		F1SLI2              	37.10%
                    	       		F1SRB7              	35.48%
                    	       		F1SH66              	25.81%
Bootstrap support for F6W7Q3 as seed ortholog is 100%.
Bootstrap support for P62901 as seed ortholog is 100%.

Group of orthologs #3699. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.scrofa:191

F6S2G5              	100.00%		D3K5J5              	100.00%
Bootstrap support for F6S2G5 as seed ortholog is 100%.
Bootstrap support for D3K5J5 as seed ortholog is 100%.

Group of orthologs #3700. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.scrofa:191

F6QKB5              	100.00%		F1SDA5              	100.00%
Bootstrap support for F6QKB5 as seed ortholog is 100%.
Bootstrap support for F1SDA5 as seed ortholog is 100%.

Group of orthologs #3701. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.scrofa:191

F6RU88              	100.00%		I3L600              	100.00%
Bootstrap support for F6RU88 as seed ortholog is 100%.
Bootstrap support for I3L600 as seed ortholog is 100%.

Group of orthologs #3702. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.scrofa:191

H2XVS4              	100.00%		F1RJ22              	100.00%
Bootstrap support for H2XVS4 as seed ortholog is 100%.
Bootstrap support for F1RJ22 as seed ortholog is 100%.

Group of orthologs #3703. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.scrofa:191

F6Z897              	100.00%		F2Z554              	100.00%
Bootstrap support for F6Z897 as seed ortholog is 100%.
Bootstrap support for F2Z554 as seed ortholog is 100%.

Group of orthologs #3704. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.scrofa:191

H2XQG7              	100.00%		F1SNR0              	100.00%
Bootstrap support for H2XQG7 as seed ortholog is 100%.
Bootstrap support for F1SNR0 as seed ortholog is 100%.

Group of orthologs #3705. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 S.scrofa:146

F6ZH30              	100.00%		Q19QT0              	100.00%
Bootstrap support for F6ZH30 as seed ortholog is 100%.
Bootstrap support for Q19QT0 as seed ortholog is 98%.

Group of orthologs #3706. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:190

H2Y3K2              	100.00%		F1RL01              	100.00%
                    	       		F2Z5N3              	42.42%
                    	       		I3LA18              	24.24%
Bootstrap support for H2Y3K2 as seed ortholog is 100%.
Bootstrap support for F1RL01 as seed ortholog is 100%.

Group of orthologs #3707. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:122

F6Q1C2              	100.00%		F1S6D0              	100.00%
                    	       		F1RP95              	19.71%
Bootstrap support for F6Q1C2 as seed ortholog is 99%.
Bootstrap support for F1S6D0 as seed ortholog is 99%.

Group of orthologs #3708. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 S.scrofa:148

F6VTD9              	100.00%		I3LC51              	100.00%
F6SF06              	26.52%		
Bootstrap support for F6VTD9 as seed ortholog is 75%.
Bootstrap support for I3LC51 as seed ortholog is 99%.

Group of orthologs #3709. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:190

H2XTV2              	100.00%		I3LB76              	100.00%
                    	       		I3L6R0              	15.64%
Bootstrap support for H2XTV2 as seed ortholog is 100%.
Bootstrap support for I3LB76 as seed ortholog is 100%.

Group of orthologs #3710. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:190

F6XHB2              	100.00%		F1RMY4              	100.00%
Bootstrap support for F6XHB2 as seed ortholog is 100%.
Bootstrap support for F1RMY4 as seed ortholog is 100%.

Group of orthologs #3711. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:190

F7BD80              	100.00%		F1RTK6              	100.00%
Bootstrap support for F7BD80 as seed ortholog is 100%.
Bootstrap support for F1RTK6 as seed ortholog is 100%.

Group of orthologs #3712. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:135

F6VGB1              	100.00%		F1SHD0              	100.00%
Bootstrap support for F6VGB1 as seed ortholog is 100%.
Bootstrap support for F1SHD0 as seed ortholog is 99%.

Group of orthologs #3713. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:190

F6ZLL7              	100.00%		F1SDP1              	100.00%
Bootstrap support for F6ZLL7 as seed ortholog is 100%.
Bootstrap support for F1SDP1 as seed ortholog is 100%.

Group of orthologs #3714. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:190

F6QEH8              	100.00%		I3LLR7              	100.00%
Bootstrap support for F6QEH8 as seed ortholog is 100%.
Bootstrap support for I3LLR7 as seed ortholog is 100%.

Group of orthologs #3715. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:190

F6YUM3              	100.00%		F1SP40              	100.00%
Bootstrap support for F6YUM3 as seed ortholog is 100%.
Bootstrap support for F1SP40 as seed ortholog is 100%.

Group of orthologs #3716. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:190

F6SMS0              	100.00%		I3LHN8              	100.00%
Bootstrap support for F6SMS0 as seed ortholog is 100%.
Bootstrap support for I3LHN8 as seed ortholog is 100%.

Group of orthologs #3717. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:190

F6WBQ8              	100.00%		I3LAL9              	100.00%
Bootstrap support for F6WBQ8 as seed ortholog is 100%.
Bootstrap support for I3LAL9 as seed ortholog is 100%.

Group of orthologs #3718. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:190

H2XQ60              	100.00%		F1SAN2              	100.00%
Bootstrap support for H2XQ60 as seed ortholog is 100%.
Bootstrap support for F1SAN2 as seed ortholog is 100%.

Group of orthologs #3719. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:190

H2XLH0              	100.00%		F1SUQ1              	100.00%
Bootstrap support for H2XLH0 as seed ortholog is 100%.
Bootstrap support for F1SUQ1 as seed ortholog is 100%.

Group of orthologs #3720. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:67

F6V0W8              	100.00%		P61291              	100.00%
Bootstrap support for F6V0W8 as seed ortholog is 97%.
Bootstrap support for P61291 as seed ortholog is 99%.

Group of orthologs #3721. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:190

F6Z277              	100.00%		I3LRL0              	100.00%
Bootstrap support for F6Z277 as seed ortholog is 100%.
Bootstrap support for I3LRL0 as seed ortholog is 100%.

Group of orthologs #3722. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:190

H2XJU8              	100.00%		I3LV51              	100.00%
Bootstrap support for H2XJU8 as seed ortholog is 100%.
Bootstrap support for I3LV51 as seed ortholog is 100%.

Group of orthologs #3723. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 S.scrofa:190

H2XRY8              	100.00%		I3LVN1              	100.00%
Bootstrap support for H2XRY8 as seed ortholog is 100%.
Bootstrap support for I3LVN1 as seed ortholog is 100%.

Group of orthologs #3724. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 S.scrofa:189

A8WHA5              	100.00%		F1RKV7              	100.00%
Bootstrap support for A8WHA5 as seed ortholog is 100%.
Bootstrap support for F1RKV7 as seed ortholog is 100%.

Group of orthologs #3725. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 S.scrofa:103

F6TVM0              	100.00%		F1SFE5              	100.00%
Bootstrap support for F6TVM0 as seed ortholog is 100%.
Bootstrap support for F1SFE5 as seed ortholog is 99%.

Group of orthologs #3726. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 S.scrofa:189

F7B8L3              	100.00%		F1RYX5              	100.00%
Bootstrap support for F7B8L3 as seed ortholog is 100%.
Bootstrap support for F1RYX5 as seed ortholog is 100%.

Group of orthologs #3727. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 S.scrofa:189

F6PWH7              	100.00%		I3LFR9              	100.00%
Bootstrap support for F6PWH7 as seed ortholog is 100%.
Bootstrap support for I3LFR9 as seed ortholog is 100%.

Group of orthologs #3728. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 S.scrofa:189

H2XY72              	100.00%		F1RKE3              	100.00%
Bootstrap support for H2XY72 as seed ortholog is 100%.
Bootstrap support for F1RKE3 as seed ortholog is 100%.

Group of orthologs #3729. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 S.scrofa:189

H2XYG3              	100.00%		F1SL07              	100.00%
Bootstrap support for H2XYG3 as seed ortholog is 100%.
Bootstrap support for F1SL07 as seed ortholog is 100%.

Group of orthologs #3730. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 S.scrofa:189

Q4H3W1              	100.00%		I3L7S1              	100.00%
Bootstrap support for Q4H3W1 as seed ortholog is 100%.
Bootstrap support for I3L7S1 as seed ortholog is 100%.

Group of orthologs #3731. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 S.scrofa:65

F7AJG5              	100.00%		I3LHI7              	100.00%
                    	       		I3LJ52              	72.09%
                    	       		I3LCF8              	31.98%
                    	       		I3LFP1              	30.08%
Bootstrap support for F7AJG5 as seed ortholog is 84%.
Bootstrap support for I3LHI7 as seed ortholog is 96%.

Group of orthologs #3732. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.scrofa:188

Q4H3R5              	100.00%		F1RUR5              	100.00%
                    	       		F1SHC5              	18.88%
Bootstrap support for Q4H3R5 as seed ortholog is 100%.
Bootstrap support for F1RUR5 as seed ortholog is 100%.

Group of orthologs #3733. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.scrofa:188

F6YAY9              	100.00%		I3LM62              	100.00%
                    	       		F1RZ98              	71.03%
Bootstrap support for F6YAY9 as seed ortholog is 100%.
Bootstrap support for I3LM62 as seed ortholog is 100%.

Group of orthologs #3734. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.scrofa:32

H2Y1H2              	100.00%		F1SHJ6              	100.00%
                    	       		I3LU13              	18.06%
Bootstrap support for H2Y1H2 as seed ortholog is 86%.
Bootstrap support for F1SHJ6 as seed ortholog is 74%.
Alternative seed ortholog is I3L6A5 (32 bits away from this cluster)

Group of orthologs #3735. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.scrofa:188

F7A410              	100.00%		I3LPV6              	100.00%
                    	       		I3LPM0              	57.95%
Bootstrap support for F7A410 as seed ortholog is 100%.
Bootstrap support for I3LPV6 as seed ortholog is 100%.

Group of orthologs #3736. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.scrofa:188

F6R4H7              	100.00%		F1SI53              	100.00%
Bootstrap support for F6R4H7 as seed ortholog is 100%.
Bootstrap support for F1SI53 as seed ortholog is 100%.

Group of orthologs #3737. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.scrofa:147

H2XU15              	100.00%		F1SIF5              	100.00%
Bootstrap support for H2XU15 as seed ortholog is 100%.
Bootstrap support for F1SIF5 as seed ortholog is 100%.

Group of orthologs #3738. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.scrofa:188

F6VFA0              	100.00%		Q29361              	100.00%
Bootstrap support for F6VFA0 as seed ortholog is 100%.
Bootstrap support for Q29361 as seed ortholog is 100%.

Group of orthologs #3739. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.scrofa:188

Q4H329              	100.00%		F1SG36              	100.00%
Bootstrap support for Q4H329 as seed ortholog is 100%.
Bootstrap support for F1SG36 as seed ortholog is 100%.

Group of orthologs #3740. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.scrofa:4

Q4H2S2              	100.00%		F2Z520              	100.00%
Bootstrap support for Q4H2S2 as seed ortholog is 100%.
Bootstrap support for F2Z520 as seed ortholog is 60%.
Alternative seed ortholog is F1SL68 (4 bits away from this cluster)

Group of orthologs #3741. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 S.scrofa:188

H2XX55              	100.00%		I3LE16              	100.00%
Bootstrap support for H2XX55 as seed ortholog is 100%.
Bootstrap support for I3LE16 as seed ortholog is 100%.

Group of orthologs #3742. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.scrofa:113

F6S6I4              	100.00%		D0G6S7              	100.00%
H2XMQ5              	10.95%		
Bootstrap support for F6S6I4 as seed ortholog is 100%.
Bootstrap support for D0G6S7 as seed ortholog is 99%.

Group of orthologs #3743. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 S.scrofa:187

F6QW72              	100.00%		F1S1X9              	100.00%
Bootstrap support for F6QW72 as seed ortholog is 100%.
Bootstrap support for F1S1X9 as seed ortholog is 100%.

Group of orthologs #3744. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 S.scrofa:187

F6QAE6              	100.00%		F1SDE3              	100.00%
Bootstrap support for F6QAE6 as seed ortholog is 100%.
Bootstrap support for F1SDE3 as seed ortholog is 100%.

Group of orthologs #3745. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 S.scrofa:187

F7B5M3              	100.00%		F1RKE9              	100.00%
Bootstrap support for F7B5M3 as seed ortholog is 100%.
Bootstrap support for F1RKE9 as seed ortholog is 100%.

Group of orthologs #3746. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 S.scrofa:187

H2XMA9              	100.00%		F1RRP9              	100.00%
Bootstrap support for H2XMA9 as seed ortholog is 100%.
Bootstrap support for F1RRP9 as seed ortholog is 100%.

Group of orthologs #3747. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 S.scrofa:60

F6WEG7              	100.00%		F2Z4X6              	100.00%
Bootstrap support for F6WEG7 as seed ortholog is 100%.
Bootstrap support for F2Z4X6 as seed ortholog is 99%.

Group of orthologs #3748. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 S.scrofa:74

H2XPS3              	100.00%		F1S5H3              	100.00%
Bootstrap support for H2XPS3 as seed ortholog is 54%.
Alternative seed ortholog is F6VEF4 (9 bits away from this cluster)
Bootstrap support for F1S5H3 as seed ortholog is 92%.

Group of orthologs #3749. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 S.scrofa:187

H2XWG8              	100.00%		F1S2I9              	100.00%
Bootstrap support for H2XWG8 as seed ortholog is 100%.
Bootstrap support for F1S2I9 as seed ortholog is 100%.

Group of orthologs #3750. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 S.scrofa:187

H2Y0K8              	100.00%		F1SQU8              	100.00%
Bootstrap support for H2Y0K8 as seed ortholog is 100%.
Bootstrap support for F1SQU8 as seed ortholog is 100%.

Group of orthologs #3751. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 S.scrofa:62

F7AZY1              	100.00%		F1RXC2              	100.00%
                    	       		F1RXC0              	40.22%
                    	       		Q5S1S4              	36.14%
                    	       		F1RXC1              	35.05%
                    	       		F1SQS9              	27.17%
                    	       		I3LA69              	8.70%
Bootstrap support for F7AZY1 as seed ortholog is 88%.
Bootstrap support for F1RXC2 as seed ortholog is 96%.

Group of orthologs #3752. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.scrofa:26

F6PH17              	100.00%		F1SIW5              	100.00%
                    	       		I3LRI4              	11.50%
                    	       		F1S937              	9.76%
                    	       		I3LK83              	8.98%
                    	       		F1SUK7              	5.35%
Bootstrap support for F6PH17 as seed ortholog is 98%.
Bootstrap support for F1SIW5 as seed ortholog is 80%.

Group of orthologs #3753. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:99

F6QAF5              	100.00%		F1S4B0              	100.00%
                    	       		I3LM94              	80.78%
                    	       		F1SBZ8              	24.79%
Bootstrap support for F6QAF5 as seed ortholog is 99%.
Bootstrap support for F1S4B0 as seed ortholog is 99%.

Group of orthologs #3754. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.scrofa:118

F6XVV4              	100.00%		I3LMC4              	100.00%
                    	       		I3L7I1              	21.43%
                    	       		F1RP08              	18.18%
Bootstrap support for F6XVV4 as seed ortholog is 100%.
Bootstrap support for I3LMC4 as seed ortholog is 100%.

Group of orthologs #3755. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.scrofa:186

H2Y2V5              	100.00%		F1SHF0              	100.00%
                    	       		F1SF72              	19.04%
                    	       		F1RVT4              	5.59%
Bootstrap support for H2Y2V5 as seed ortholog is 100%.
Bootstrap support for F1SHF0 as seed ortholog is 100%.

Group of orthologs #3756. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.scrofa:16

F6WZ85              	100.00%		E9LK28              	100.00%
                    	       		F1SMP9              	33.75%
Bootstrap support for F6WZ85 as seed ortholog is 98%.
Bootstrap support for E9LK28 as seed ortholog is 60%.
Alternative seed ortholog is F1SGN2 (16 bits away from this cluster)

Group of orthologs #3757. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.scrofa:186

F7BMP3              	100.00%		F1RSF4              	100.00%
                    	       		F1RI48              	47.37%
Bootstrap support for F7BMP3 as seed ortholog is 100%.
Bootstrap support for F1RSF4 as seed ortholog is 100%.

Group of orthologs #3758. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.scrofa:106

H2XLQ3              	100.00%		I3L911              	100.00%
                    	       		F2Z555              	46.94%
Bootstrap support for H2XLQ3 as seed ortholog is 99%.
Bootstrap support for I3L911 as seed ortholog is 99%.

Group of orthologs #3759. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.scrofa:186

F6ZUE4              	100.00%		F1RS39              	100.00%
Bootstrap support for F6ZUE4 as seed ortholog is 100%.
Bootstrap support for F1RS39 as seed ortholog is 100%.

Group of orthologs #3760. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.scrofa:186

F6V3K9              	100.00%		F1SDC2              	100.00%
Bootstrap support for F6V3K9 as seed ortholog is 96%.
Bootstrap support for F1SDC2 as seed ortholog is 100%.

Group of orthologs #3761. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.scrofa:186

F6RAS4              	100.00%		F1SRW4              	100.00%
Bootstrap support for F6RAS4 as seed ortholog is 100%.
Bootstrap support for F1SRW4 as seed ortholog is 100%.

Group of orthologs #3762. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.scrofa:186

F6TJA4              	100.00%		F2Z5C8              	100.00%
Bootstrap support for F6TJA4 as seed ortholog is 100%.
Bootstrap support for F2Z5C8 as seed ortholog is 100%.

Group of orthologs #3763. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.scrofa:186

H2XK93              	100.00%		F1S5G4              	100.00%
Bootstrap support for H2XK93 as seed ortholog is 100%.
Bootstrap support for F1S5G4 as seed ortholog is 100%.

Group of orthologs #3764. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.scrofa:186

H2Y0Y0              	100.00%		F1RT13              	100.00%
Bootstrap support for H2Y0Y0 as seed ortholog is 100%.
Bootstrap support for F1RT13 as seed ortholog is 100%.

Group of orthologs #3765. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 S.scrofa:186

H2XZL8              	100.00%		F2Z5G9              	100.00%
Bootstrap support for H2XZL8 as seed ortholog is 100%.
Bootstrap support for F2Z5G9 as seed ortholog is 100%.

Group of orthologs #3766. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 S.scrofa:1

F7A141              	100.00%		F1SQ45              	100.00%
H2Y144              	46.60%		
F6Q062              	9.69%		
Bootstrap support for F7A141 as seed ortholog is 85%.
Bootstrap support for F1SQ45 as seed ortholog is 55%.
Alternative seed ortholog is I3LJV6 (1 bits away from this cluster)

Group of orthologs #3767. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.scrofa:185

H2XP91              	100.00%		E0YLM4              	100.00%
                    	       		F1RTY3              	8.29%
Bootstrap support for H2XP91 as seed ortholog is 100%.
Bootstrap support for E0YLM4 as seed ortholog is 100%.

Group of orthologs #3768. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.scrofa:71

F6YB59              	100.00%		F1S5I0              	100.00%
                    	       		I3LB77              	7.98%
Bootstrap support for F6YB59 as seed ortholog is 100%.
Bootstrap support for F1S5I0 as seed ortholog is 99%.

Group of orthologs #3769. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:54

F6T0P8              	100.00%		I3LEE6              	100.00%
                    	       		F1SKE7              	27.27%
Bootstrap support for F6T0P8 as seed ortholog is 96%.
Bootstrap support for I3LEE6 as seed ortholog is 92%.

Group of orthologs #3770. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.scrofa:185

F6XS77              	100.00%		I3LNG6              	100.00%
                    	       		K7GSB3              	26.86%
Bootstrap support for F6XS77 as seed ortholog is 100%.
Bootstrap support for I3LNG6 as seed ortholog is 100%.

Group of orthologs #3771. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.scrofa:185

F6U3G5              	100.00%		F1RGW2              	100.00%
Bootstrap support for F6U3G5 as seed ortholog is 100%.
Bootstrap support for F1RGW2 as seed ortholog is 100%.

Group of orthologs #3772. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.scrofa:185

F6R725              	100.00%		F1S3J8              	100.00%
Bootstrap support for F6R725 as seed ortholog is 100%.
Bootstrap support for F1S3J8 as seed ortholog is 100%.

Group of orthologs #3773. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.scrofa:83

F6PTF9              	100.00%		F1SC46              	100.00%
Bootstrap support for F6PTF9 as seed ortholog is 100%.
Bootstrap support for F1SC46 as seed ortholog is 93%.

Group of orthologs #3774. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.scrofa:185

Q4H3K0              	100.00%		F1RJQ1              	100.00%
Bootstrap support for Q4H3K0 as seed ortholog is 100%.
Bootstrap support for F1RJQ1 as seed ortholog is 100%.

Group of orthologs #3775. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.scrofa:185

Q4H2R3              	100.00%		F1RRM9              	100.00%
Bootstrap support for Q4H2R3 as seed ortholog is 100%.
Bootstrap support for F1RRM9 as seed ortholog is 100%.

Group of orthologs #3776. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 S.scrofa:185

F6RBI7              	100.00%		I3LRR7              	100.00%
Bootstrap support for F6RBI7 as seed ortholog is 85%.
Bootstrap support for I3LRR7 as seed ortholog is 100%.

Group of orthologs #3777. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.scrofa:185

H2XVP4              	100.00%		I3L7V7              	100.00%
Bootstrap support for H2XVP4 as seed ortholog is 100%.
Bootstrap support for I3L7V7 as seed ortholog is 100%.

Group of orthologs #3778. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 S.scrofa:185

H2XQD7              	100.00%		I3LF36              	100.00%
Bootstrap support for H2XQD7 as seed ortholog is 100%.
Bootstrap support for I3LF36 as seed ortholog is 100%.

Group of orthologs #3779. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 S.scrofa:66

F6YSA0              	100.00%		P63317              	100.00%
Bootstrap support for F6YSA0 as seed ortholog is 93%.
Bootstrap support for P63317 as seed ortholog is 99%.

Group of orthologs #3780. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 S.scrofa:184

F6ULU6              	100.00%		F1RNX8              	100.00%
H2XZ40              	32.53%		F1S922              	36.40%
F7AP79              	15.38%		F1SCJ8              	34.14%
                    	       		Q2HY40              	17.82%
Bootstrap support for F6ULU6 as seed ortholog is 100%.
Bootstrap support for F1RNX8 as seed ortholog is 100%.

Group of orthologs #3781. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.scrofa:138

H2XSM5              	100.00%		A5GFQ5              	100.00%
Bootstrap support for H2XSM5 as seed ortholog is 100%.
Bootstrap support for A5GFQ5 as seed ortholog is 100%.

Group of orthologs #3782. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 S.scrofa:184

F6YI25              	100.00%		I3LF34              	100.00%
Bootstrap support for F6YI25 as seed ortholog is 100%.
Bootstrap support for I3LF34 as seed ortholog is 100%.

Group of orthologs #3783. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:183

F6QRZ2              	100.00%		F1SBM6              	100.00%
                    	       		F1SD18              	36.73%
                    	       		F1RUL8              	7.64%
Bootstrap support for F6QRZ2 as seed ortholog is 100%.
Bootstrap support for F1SBM6 as seed ortholog is 100%.

Group of orthologs #3784. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:183

H2XZ02              	100.00%		F1SIZ0              	100.00%
                    	       		F1SS15              	32.92%
                    	       		I3L8A0              	11.25%
Bootstrap support for H2XZ02 as seed ortholog is 100%.
Bootstrap support for F1SIZ0 as seed ortholog is 100%.

Group of orthologs #3785. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:183

F6QDK5              	100.00%		F1SJ21              	100.00%
                    	       		F1S600              	8.02%
Bootstrap support for F6QDK5 as seed ortholog is 100%.
Bootstrap support for F1SJ21 as seed ortholog is 100%.

Group of orthologs #3786. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:107

F6X986              	100.00%		F1RY92              	100.00%
                    	       		I3LAE9              	83.23%
Bootstrap support for F6X986 as seed ortholog is 98%.
Bootstrap support for F1RY92 as seed ortholog is 100%.

Group of orthologs #3787. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:41

F6XHG0              	100.00%		F1STG1              	100.00%
                    	       		F1RXM2              	9.40%
Bootstrap support for F6XHG0 as seed ortholog is 100%.
Bootstrap support for F1STG1 as seed ortholog is 88%.

Group of orthologs #3788. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:183

F6TM04              	100.00%		I3LMG2              	100.00%
                    	       		F1S9T2              	22.54%
Bootstrap support for F6TM04 as seed ortholog is 100%.
Bootstrap support for I3LMG2 as seed ortholog is 100%.

Group of orthologs #3789. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:94

F6SN27              	100.00%		I3LVN4              	100.00%
                    	       		F1SB26              	24.84%
Bootstrap support for F6SN27 as seed ortholog is 100%.
Bootstrap support for I3LVN4 as seed ortholog is 99%.

Group of orthologs #3790. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:102

F6X139              	100.00%		F1RMV5              	100.00%
Bootstrap support for F6X139 as seed ortholog is 100%.
Bootstrap support for F1RMV5 as seed ortholog is 99%.

Group of orthologs #3791. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:13

F6S202              	100.00%		F1SGS6              	100.00%
Bootstrap support for F6S202 as seed ortholog is 100%.
Bootstrap support for F1SGS6 as seed ortholog is 54%.
Alternative seed ortholog is I3LSS9 (13 bits away from this cluster)

Group of orthologs #3792. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:183

F7AF59              	100.00%		F1S6M0              	100.00%
Bootstrap support for F7AF59 as seed ortholog is 100%.
Bootstrap support for F1S6M0 as seed ortholog is 100%.

Group of orthologs #3793. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:183

H2Y013              	100.00%		F1REW9              	100.00%
Bootstrap support for H2Y013 as seed ortholog is 100%.
Bootstrap support for F1REW9 as seed ortholog is 100%.

Group of orthologs #3794. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:183

F6WF92              	100.00%		F1SMA0              	100.00%
Bootstrap support for F6WF92 as seed ortholog is 100%.
Bootstrap support for F1SMA0 as seed ortholog is 100%.

Group of orthologs #3795. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 S.scrofa:45

F6SBE5              	100.00%		I3LIB5              	100.00%
Bootstrap support for F6SBE5 as seed ortholog is 90%.
Bootstrap support for I3LIB5 as seed ortholog is 83%.

Group of orthologs #3796. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:183

F6X3J8              	100.00%		I3L6V1              	100.00%
Bootstrap support for F6X3J8 as seed ortholog is 100%.
Bootstrap support for I3L6V1 as seed ortholog is 100%.

Group of orthologs #3797. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:183

H2Y2U3              	100.00%		F1SN05              	100.00%
Bootstrap support for H2Y2U3 as seed ortholog is 100%.
Bootstrap support for F1SN05 as seed ortholog is 100%.

Group of orthologs #3798. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 S.scrofa:183

H2XZ97              	100.00%		F1SUA3              	100.00%
Bootstrap support for H2XZ97 as seed ortholog is 100%.
Bootstrap support for F1SUA3 as seed ortholog is 100%.

Group of orthologs #3799. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:7

Q2PEE1              	100.00%		F2Z536              	100.00%
Bootstrap support for Q2PEE1 as seed ortholog is 100%.
Bootstrap support for F2Z536 as seed ortholog is 80%.

Group of orthologs #3800. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:25

H2Y2P7              	100.00%		Q864U8              	100.00%
Bootstrap support for H2Y2P7 as seed ortholog is 99%.
Bootstrap support for Q864U8 as seed ortholog is 78%.

Group of orthologs #3801. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.scrofa:182

H2XPA7              	100.00%		I3LSZ5              	100.00%
                    	       		I3LRA0              	14.84%
Bootstrap support for H2XPA7 as seed ortholog is 100%.
Bootstrap support for I3LSZ5 as seed ortholog is 100%.

Group of orthologs #3802. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.scrofa:40

F6U8F3              	100.00%		F1RNW3              	100.00%
Bootstrap support for F6U8F3 as seed ortholog is 100%.
Bootstrap support for F1RNW3 as seed ortholog is 92%.

Group of orthologs #3803. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.scrofa:182

F6YHE2              	100.00%		F1S683              	100.00%
Bootstrap support for F6YHE2 as seed ortholog is 100%.
Bootstrap support for F1S683 as seed ortholog is 100%.

Group of orthologs #3804. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.scrofa:182

F7BNU5              	100.00%		F1S544              	100.00%
Bootstrap support for F7BNU5 as seed ortholog is 100%.
Bootstrap support for F1S544 as seed ortholog is 100%.

Group of orthologs #3805. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.scrofa:182

F6PV21              	100.00%		I3LGV4              	100.00%
Bootstrap support for F6PV21 as seed ortholog is 100%.
Bootstrap support for I3LGV4 as seed ortholog is 100%.

Group of orthologs #3806. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.scrofa:130

F6S4Y6              	100.00%		I3LBW5              	100.00%
Bootstrap support for F6S4Y6 as seed ortholog is 100%.
Bootstrap support for I3LBW5 as seed ortholog is 100%.

Group of orthologs #3807. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 S.scrofa:182

H2XSE6              	100.00%		I3LNZ3              	100.00%
Bootstrap support for H2XSE6 as seed ortholog is 100%.
Bootstrap support for I3LNZ3 as seed ortholog is 100%.

Group of orthologs #3808. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 S.scrofa:26

F7B7S8              	100.00%		F1RIH8              	100.00%
F6SYR3              	12.44%		F1SG01              	5.05%
Bootstrap support for F7B7S8 as seed ortholog is 82%.
Bootstrap support for F1RIH8 as seed ortholog is 72%.
Alternative seed ortholog is F1S092 (26 bits away from this cluster)

Group of orthologs #3809. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:181

F6SWZ3              	100.00%		F1RQW6              	100.00%
                    	       		F1RQW7              	23.90%
Bootstrap support for F6SWZ3 as seed ortholog is 100%.
Bootstrap support for F1RQW6 as seed ortholog is 100%.

Group of orthologs #3810. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:181

F7AEE6              	100.00%		F1S0M9              	100.00%
                    	       		I3LRT6              	39.57%
Bootstrap support for F7AEE6 as seed ortholog is 100%.
Bootstrap support for F1S0M9 as seed ortholog is 100%.

Group of orthologs #3811. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:181

H2XSM6              	100.00%		F1RRC4              	100.00%
                    	       		I3LAB5              	9.56%
Bootstrap support for H2XSM6 as seed ortholog is 100%.
Bootstrap support for F1RRC4 as seed ortholog is 100%.

Group of orthologs #3812. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:181

F6XS97              	100.00%		I3L873              	100.00%
                    	       		F1S3K5              	24.36%
Bootstrap support for F6XS97 as seed ortholog is 99%.
Bootstrap support for I3L873 as seed ortholog is 100%.

Group of orthologs #3813. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:181

F6V8Z4              	100.00%		F1RG95              	100.00%
Bootstrap support for F6V8Z4 as seed ortholog is 100%.
Bootstrap support for F1RG95 as seed ortholog is 100%.

Group of orthologs #3814. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:90

F6Q539              	100.00%		F1RYP3              	100.00%
Bootstrap support for F6Q539 as seed ortholog is 100%.
Bootstrap support for F1RYP3 as seed ortholog is 97%.

Group of orthologs #3815. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.scrofa:125

F6X2L1              	100.00%		F1S2X3              	100.00%
Bootstrap support for F6X2L1 as seed ortholog is 99%.
Bootstrap support for F1S2X3 as seed ortholog is 100%.

Group of orthologs #3816. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:181

F7B819              	100.00%		F1SGF4              	100.00%
Bootstrap support for F7B819 as seed ortholog is 100%.
Bootstrap support for F1SGF4 as seed ortholog is 100%.

Group of orthologs #3817. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:181

F6QPH0              	100.00%		I3LTQ9              	100.00%
Bootstrap support for F6QPH0 as seed ortholog is 100%.
Bootstrap support for I3LTQ9 as seed ortholog is 100%.

Group of orthologs #3818. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:65

H2XLZ0              	100.00%		I3LAF0              	100.00%
Bootstrap support for H2XLZ0 as seed ortholog is 100%.
Bootstrap support for I3LAF0 as seed ortholog is 97%.

Group of orthologs #3819. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:181

H2XUX6              	100.00%		I3L683              	100.00%
Bootstrap support for H2XUX6 as seed ortholog is 100%.
Bootstrap support for I3L683 as seed ortholog is 100%.

Group of orthologs #3820. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.scrofa:181

F6Y8Y8              	100.00%		Q06AA4              	100.00%
Bootstrap support for F6Y8Y8 as seed ortholog is 100%.
Bootstrap support for Q06AA4 as seed ortholog is 100%.

Group of orthologs #3821. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:92

H2XTN2              	100.00%		I3LQE1              	100.00%
Bootstrap support for H2XTN2 as seed ortholog is 100%.
Bootstrap support for I3LQE1 as seed ortholog is 99%.

Group of orthologs #3822. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 S.scrofa:181

H2XWZ6              	100.00%		I3LRC6              	100.00%
Bootstrap support for H2XWZ6 as seed ortholog is 100%.
Bootstrap support for I3LRC6 as seed ortholog is 100%.

Group of orthologs #3823. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:121

F6Y3D6              	100.00%		F1S7D3              	100.00%
F6QDM9              	46.30%		F1S7C9              	74.24%
                    	       		I3LBL7              	35.98%
                    	       		F1S7C8              	29.55%
Bootstrap support for F6Y3D6 as seed ortholog is 99%.
Bootstrap support for F1S7D3 as seed ortholog is 100%.

Group of orthologs #3824. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:180

F6UXU4              	100.00%		F1S579              	100.00%
                    	       		I3LD15              	100.00%
Bootstrap support for F6UXU4 as seed ortholog is 100%.
Bootstrap support for F1S579 as seed ortholog is 100%.
Bootstrap support for I3LD15 as seed ortholog is 100%.

Group of orthologs #3825. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:54

H2XTW7              	100.00%		F1SF65              	100.00%
                    	       		F1SGW4              	12.03%
Bootstrap support for H2XTW7 as seed ortholog is 100%.
Bootstrap support for F1SF65 as seed ortholog is 97%.

Group of orthologs #3826. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:180

F6SQS1              	100.00%		F1RFK0              	100.00%
Bootstrap support for F6SQS1 as seed ortholog is 100%.
Bootstrap support for F1RFK0 as seed ortholog is 100%.

Group of orthologs #3827. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:180

F6RKZ8              	100.00%		F1S227              	100.00%
Bootstrap support for F6RKZ8 as seed ortholog is 100%.
Bootstrap support for F1S227 as seed ortholog is 100%.

Group of orthologs #3828. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:180

H2Y2E7              	100.00%		F1RLP0              	100.00%
Bootstrap support for H2Y2E7 as seed ortholog is 100%.
Bootstrap support for F1RLP0 as seed ortholog is 100%.

Group of orthologs #3829. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:180

H2XUK0              	100.00%		F1S1D9              	100.00%
Bootstrap support for H2XUK0 as seed ortholog is 100%.
Bootstrap support for F1S1D9 as seed ortholog is 100%.

Group of orthologs #3830. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:180

F6ZA91              	100.00%		I3L7P4              	100.00%
Bootstrap support for F6ZA91 as seed ortholog is 100%.
Bootstrap support for I3L7P4 as seed ortholog is 100%.

Group of orthologs #3831. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:109

F6Y6Z0              	100.00%		I3LJ05              	100.00%
Bootstrap support for F6Y6Z0 as seed ortholog is 100%.
Bootstrap support for I3LJ05 as seed ortholog is 100%.

Group of orthologs #3832. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:180

F6SRD6              	100.00%		Q767K7              	100.00%
Bootstrap support for F6SRD6 as seed ortholog is 100%.
Bootstrap support for Q767K7 as seed ortholog is 100%.

Group of orthologs #3833. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:180

F6VTY2              	100.00%		I3LTW0              	100.00%
Bootstrap support for F6VTY2 as seed ortholog is 100%.
Bootstrap support for I3LTW0 as seed ortholog is 100%.

Group of orthologs #3834. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:180

F6ZMJ7              	100.00%		I3LVJ9              	100.00%
Bootstrap support for F6ZMJ7 as seed ortholog is 100%.
Bootstrap support for I3LVJ9 as seed ortholog is 100%.

Group of orthologs #3835. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 S.scrofa:19

H2XKM5              	100.00%		I3LS76              	100.00%
Bootstrap support for H2XKM5 as seed ortholog is 100%.
Bootstrap support for I3LS76 as seed ortholog is 86%.

Group of orthologs #3836. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.scrofa:136

F6YX22              	100.00%		F1RUK3              	100.00%
                    	       		F1SQ13              	100.00%
Bootstrap support for F6YX22 as seed ortholog is 100%.
Bootstrap support for F1RUK3 as seed ortholog is 100%.
Bootstrap support for F1SQ13 as seed ortholog is 100%.

Group of orthologs #3837. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.scrofa:80

Q6XLI4              	100.00%		F1RY40              	100.00%
                    	       		I3LLW0              	13.42%
Bootstrap support for Q6XLI4 as seed ortholog is 100%.
Bootstrap support for F1RY40 as seed ortholog is 99%.

Group of orthologs #3838. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 S.scrofa:179

F6U0U0              	100.00%		F1RUH7              	100.00%
Bootstrap support for F6U0U0 as seed ortholog is 99%.
Bootstrap support for F1RUH7 as seed ortholog is 100%.

Group of orthologs #3839. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.scrofa:179

F6W6L5              	100.00%		F1SBM1              	100.00%
Bootstrap support for F6W6L5 as seed ortholog is 100%.
Bootstrap support for F1SBM1 as seed ortholog is 100%.

Group of orthologs #3840. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.scrofa:179

F6YNK9              	100.00%		F1SG39              	100.00%
Bootstrap support for F6YNK9 as seed ortholog is 100%.
Bootstrap support for F1SG39 as seed ortholog is 100%.

Group of orthologs #3841. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.scrofa:179

F7BHN2              	100.00%		F1S8M9              	100.00%
Bootstrap support for F7BHN2 as seed ortholog is 100%.
Bootstrap support for F1S8M9 as seed ortholog is 100%.

Group of orthologs #3842. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.scrofa:179

F7BAJ6              	100.00%		F1SF20              	100.00%
Bootstrap support for F7BAJ6 as seed ortholog is 100%.
Bootstrap support for F1SF20 as seed ortholog is 100%.

Group of orthologs #3843. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 S.scrofa:135

H2Y104              	100.00%		F1SK43              	100.00%
Bootstrap support for H2Y104 as seed ortholog is 100%.
Bootstrap support for F1SK43 as seed ortholog is 100%.

Group of orthologs #3844. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 S.scrofa:13

H2XZE9              	100.00%		K7GRR0              	100.00%
Bootstrap support for H2XZE9 as seed ortholog is 71%.
Alternative seed ortholog is H2XUN8 (21 bits away from this cluster)
Bootstrap support for K7GRR0 as seed ortholog is 65%.
Alternative seed ortholog is I3LAR9 (13 bits away from this cluster)

Group of orthologs #3845. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 S.scrofa:86

F7AU71              	100.00%		F1RFB7              	100.00%
                    	       		I3LLM8              	5.21%
Bootstrap support for F7AU71 as seed ortholog is 100%.
Bootstrap support for F1RFB7 as seed ortholog is 99%.

Group of orthologs #3846. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 S.scrofa:178

F6WCM2              	100.00%		D0G6S1              	100.00%
Bootstrap support for F6WCM2 as seed ortholog is 100%.
Bootstrap support for D0G6S1 as seed ortholog is 100%.

Group of orthologs #3847. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 S.scrofa:178

F6QES8              	100.00%		F1S248              	100.00%
Bootstrap support for F6QES8 as seed ortholog is 100%.
Bootstrap support for F1S248 as seed ortholog is 100%.

Group of orthologs #3848. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 S.scrofa:178

F6V9L7              	100.00%		F1SV35              	100.00%
Bootstrap support for F6V9L7 as seed ortholog is 100%.
Bootstrap support for F1SV35 as seed ortholog is 100%.

Group of orthologs #3849. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 S.scrofa:178

H2XS17              	100.00%		F1S5S1              	100.00%
Bootstrap support for H2XS17 as seed ortholog is 100%.
Bootstrap support for F1S5S1 as seed ortholog is 100%.

Group of orthologs #3850. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.scrofa:48

Q1RLE5              	100.00%		F1RTJ7              	100.00%
Bootstrap support for Q1RLE5 as seed ortholog is 90%.
Bootstrap support for F1RTJ7 as seed ortholog is 88%.

Group of orthologs #3851. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.scrofa:177

F6W6Z3              	100.00%		I3LBT8              	100.00%
                    	       		F1S891              	43.43%
Bootstrap support for F6W6Z3 as seed ortholog is 100%.
Bootstrap support for I3LBT8 as seed ortholog is 100%.

Group of orthologs #3852. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.scrofa:177

F6TPI3              	100.00%		F1RZG7              	100.00%
Bootstrap support for F6TPI3 as seed ortholog is 100%.
Bootstrap support for F1RZG7 as seed ortholog is 100%.

Group of orthologs #3853. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 S.scrofa:177

F7A552              	100.00%		F1RUJ5              	100.00%
Bootstrap support for F7A552 as seed ortholog is 92%.
Bootstrap support for F1RUJ5 as seed ortholog is 100%.

Group of orthologs #3854. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.scrofa:177

F6TCG6              	100.00%		F1SJN9              	100.00%
Bootstrap support for F6TCG6 as seed ortholog is 100%.
Bootstrap support for F1SJN9 as seed ortholog is 100%.

Group of orthologs #3855. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.scrofa:177

H2XLA2              	100.00%		F1RNR7              	100.00%
Bootstrap support for H2XLA2 as seed ortholog is 100%.
Bootstrap support for F1RNR7 as seed ortholog is 100%.

Group of orthologs #3856. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.scrofa:177

F6YVQ1              	100.00%		I3LCU8              	100.00%
Bootstrap support for F6YVQ1 as seed ortholog is 100%.
Bootstrap support for I3LCU8 as seed ortholog is 100%.

Group of orthologs #3857. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.scrofa:177

H2XWB6              	100.00%		F1SN13              	100.00%
Bootstrap support for H2XWB6 as seed ortholog is 100%.
Bootstrap support for F1SN13 as seed ortholog is 100%.

Group of orthologs #3858. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 S.scrofa:177

H2XT68              	100.00%		I3LNR1              	100.00%
Bootstrap support for H2XT68 as seed ortholog is 100%.
Bootstrap support for I3LNR1 as seed ortholog is 100%.

Group of orthologs #3859. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.scrofa:16

H2XLB2              	100.00%		Q6YT42              	100.00%
                    	       		Q6YT41              	67.29%
                    	       		Q6YST0              	38.36%
                    	       		I3LU07              	38.18%
                    	       		I3LDJ7              	35.27%
                    	       		I3L552              	28.42%
                    	       		I3LK04              	20.21%
                    	       		I3LAU2              	17.81%
                    	       		F1SRE8              	8.73%
                    	       		Q6YT47              	8.56%
                    	       		Q75ZH0              	7.19%
                    	       		I3LU52              	6.51%
                    	       		Q861S1              	6.34%
                    	       		F1RSV3              	6.16%
Bootstrap support for H2XLB2 as seed ortholog is 93%.
Bootstrap support for Q6YT42 as seed ortholog is 34%.
Alternative seed ortholog is I3LJ35 (16 bits away from this cluster)

Group of orthologs #3860. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.scrofa:40

F6T5H3              	100.00%		I3L863              	100.00%
Q4H389              	100.00%		F1RS26              	100.00%
Bootstrap support for F6T5H3 as seed ortholog is 100%.
Bootstrap support for Q4H389 as seed ortholog is 100%.
Bootstrap support for I3L863 as seed ortholog is 83%.
Bootstrap support for F1RS26 as seed ortholog is 69%.
Alternative seed ortholog is F1S5F5 (40 bits away from this cluster)

Group of orthologs #3861. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 S.scrofa:18

F6T9X3              	100.00%		F1RPW3              	100.00%
F6YYJ3              	7.34%		
Bootstrap support for F6T9X3 as seed ortholog is 83%.
Bootstrap support for F1RPW3 as seed ortholog is 63%.
Alternative seed ortholog is I3LCK0 (18 bits away from this cluster)

Group of orthologs #3862. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.scrofa:176

F6PVE7              	100.00%		F1SPT7              	100.00%
                    	       		F1RKX4              	21.13%
Bootstrap support for F6PVE7 as seed ortholog is 100%.
Bootstrap support for F1SPT7 as seed ortholog is 100%.

Group of orthologs #3863. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.scrofa:176

F6SNN1              	100.00%		I3LUZ2              	100.00%
                    	       		F1SRJ4              	72.11%
Bootstrap support for F6SNN1 as seed ortholog is 99%.
Bootstrap support for I3LUZ2 as seed ortholog is 100%.

Group of orthologs #3864. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.scrofa:176

F6PIA8              	100.00%		F1SJX4              	100.00%
Bootstrap support for F6PIA8 as seed ortholog is 100%.
Bootstrap support for F1SJX4 as seed ortholog is 100%.

Group of orthologs #3865. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.scrofa:108

F6YRC1              	100.00%		F1RQU9              	100.00%
Bootstrap support for F6YRC1 as seed ortholog is 100%.
Bootstrap support for F1RQU9 as seed ortholog is 100%.

Group of orthologs #3866. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.scrofa:176

F6QYL2              	100.00%		F1SGN7              	100.00%
Bootstrap support for F6QYL2 as seed ortholog is 100%.
Bootstrap support for F1SGN7 as seed ortholog is 100%.

Group of orthologs #3867. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.scrofa:176

F7AS27              	100.00%		F1RRQ0              	100.00%
Bootstrap support for F7AS27 as seed ortholog is 100%.
Bootstrap support for F1RRQ0 as seed ortholog is 100%.

Group of orthologs #3868. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:176

H2XU85              	100.00%		F1RFY9              	100.00%
Bootstrap support for H2XU85 as seed ortholog is 91%.
Bootstrap support for F1RFY9 as seed ortholog is 100%.

Group of orthologs #3869. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.scrofa:176

H2XZI6              	100.00%		F1RLP7              	100.00%
Bootstrap support for H2XZI6 as seed ortholog is 100%.
Bootstrap support for F1RLP7 as seed ortholog is 100%.

Group of orthologs #3870. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.scrofa:121

F6XW18              	100.00%		F1SUX3              	100.00%
Bootstrap support for F6XW18 as seed ortholog is 97%.
Bootstrap support for F1SUX3 as seed ortholog is 100%.

Group of orthologs #3871. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.scrofa:176

H2XPU1              	100.00%		F1S8S4              	100.00%
Bootstrap support for H2XPU1 as seed ortholog is 100%.
Bootstrap support for F1S8S4 as seed ortholog is 100%.

Group of orthologs #3872. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.scrofa:176

F6VP77              	100.00%		I3LBN1              	100.00%
Bootstrap support for F6VP77 as seed ortholog is 100%.
Bootstrap support for I3LBN1 as seed ortholog is 100%.

Group of orthologs #3873. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.scrofa:18

H2XY30              	100.00%		F1S0E2              	100.00%
Bootstrap support for H2XY30 as seed ortholog is 100%.
Bootstrap support for F1S0E2 as seed ortholog is 77%.

Group of orthologs #3874. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.scrofa:176

F6TK51              	100.00%		I3LS92              	100.00%
Bootstrap support for F6TK51 as seed ortholog is 100%.
Bootstrap support for I3LS92 as seed ortholog is 100%.

Group of orthologs #3875. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 S.scrofa:176

H2XXE4              	100.00%		I3L8G1              	100.00%
Bootstrap support for H2XXE4 as seed ortholog is 100%.
Bootstrap support for I3L8G1 as seed ortholog is 100%.

Group of orthologs #3876. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 S.scrofa:5

F6Q162              	100.00%		P16293              	100.00%
F6WXY4              	17.53%		F1RN41              	26.56%
                    	       		F1RN40              	23.22%
                    	       		Q9GLP2              	13.79%
                    	       		Q19AZ8              	5.22%
Bootstrap support for F6Q162 as seed ortholog is 74%.
Alternative seed ortholog is F6UMK0 (30 bits away from this cluster)
Bootstrap support for P16293 as seed ortholog is 54%.
Alternative seed ortholog is I3LD44 (5 bits away from this cluster)

Group of orthologs #3877. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:57

F6SSR3              	100.00%		I3L9H1              	100.00%
                    	       		I3L9A9              	48.93%
                    	       		F1SKH7              	6.52%
                    	       		F1SKH1              	5.74%
Bootstrap support for F6SSR3 as seed ortholog is 100%.
Bootstrap support for I3L9H1 as seed ortholog is 93%.

Group of orthologs #3878. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:54

F6UBS1              	100.00%		F1SJ70              	100.00%
H2XP87              	38.53%		I3LQ31              	56.22%
Bootstrap support for F6UBS1 as seed ortholog is 100%.
Bootstrap support for F1SJ70 as seed ortholog is 97%.

Group of orthologs #3879. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.scrofa:55

F6YD46              	100.00%		Q99028              	100.00%
F6T569              	46.26%		
F6WGU2              	34.76%		
Bootstrap support for F6YD46 as seed ortholog is 99%.
Bootstrap support for Q99028 as seed ortholog is 99%.

Group of orthologs #3880. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:175

F6RZD9              	100.00%		F1S6B2              	100.00%
F6SY55              	24.95%		
Bootstrap support for F6RZD9 as seed ortholog is 100%.
Bootstrap support for F1S6B2 as seed ortholog is 100%.

Group of orthologs #3881. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:175

F6V1U5              	100.00%		F2Z5V4              	100.00%
                    	       		F1RGI2              	45.76%
Bootstrap support for F6V1U5 as seed ortholog is 100%.
Bootstrap support for F2Z5V4 as seed ortholog is 100%.

Group of orthologs #3882. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:56

F6VSM2              	100.00%		I3LVG4              	100.00%
                    	       		I3LDV8              	24.71%
Bootstrap support for F6VSM2 as seed ortholog is 100%.
Bootstrap support for I3LVG4 as seed ortholog is 95%.

Group of orthologs #3883. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:175

Q4H3N7              	100.00%		K7GQG7              	100.00%
                    	       		F1SDI1              	20.99%
Bootstrap support for Q4H3N7 as seed ortholog is 100%.
Bootstrap support for K7GQG7 as seed ortholog is 100%.

Group of orthologs #3884. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:175

F6U857              	100.00%		F1SJ24              	100.00%
Bootstrap support for F6U857 as seed ortholog is 100%.
Bootstrap support for F1SJ24 as seed ortholog is 100%.

Group of orthologs #3885. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:175

F6SYB9              	100.00%		F1SRD9              	100.00%
Bootstrap support for F6SYB9 as seed ortholog is 100%.
Bootstrap support for F1SRD9 as seed ortholog is 100%.

Group of orthologs #3886. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:175

F6PP61              	100.00%		Q29384              	100.00%
Bootstrap support for F6PP61 as seed ortholog is 100%.
Bootstrap support for Q29384 as seed ortholog is 100%.

Group of orthologs #3887. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:175

H2Y0D5              	100.00%		F1S6K5              	100.00%
Bootstrap support for H2Y0D5 as seed ortholog is 100%.
Bootstrap support for F1S6K5 as seed ortholog is 100%.

Group of orthologs #3888. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:175

H2XML4              	100.00%		F1SRV4              	100.00%
Bootstrap support for H2XML4 as seed ortholog is 100%.
Bootstrap support for F1SRV4 as seed ortholog is 100%.

Group of orthologs #3889. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:175

F6Y0M4              	100.00%		I3LIQ3              	100.00%
Bootstrap support for F6Y0M4 as seed ortholog is 100%.
Bootstrap support for I3LIQ3 as seed ortholog is 100%.

Group of orthologs #3890. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 S.scrofa:175

F7AS59              	100.00%		K7GRN4              	100.00%
Bootstrap support for F7AS59 as seed ortholog is 100%.
Bootstrap support for K7GRN4 as seed ortholog is 100%.

Group of orthologs #3891. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 S.scrofa:28

F6RVU9              	100.00%		I3LE44              	100.00%
F6RW80              	63.31%		
F6WDU3              	23.21%		
Bootstrap support for F6RVU9 as seed ortholog is 78%.
Bootstrap support for I3LE44 as seed ortholog is 69%.
Alternative seed ortholog is F1RU22 (28 bits away from this cluster)

Group of orthologs #3892. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 S.scrofa:174

F6VBR9              	100.00%		F1SLS4              	100.00%
                    	       		F1SMI7              	25.95%
Bootstrap support for F6VBR9 as seed ortholog is 100%.
Bootstrap support for F1SLS4 as seed ortholog is 100%.

Group of orthologs #3893. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:174

F6RDE8              	100.00%		F1RXB7              	100.00%
Bootstrap support for F6RDE8 as seed ortholog is 99%.
Bootstrap support for F1RXB7 as seed ortholog is 100%.

Group of orthologs #3894. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 S.scrofa:174

F6VP69              	100.00%		F1RYS8              	100.00%
Bootstrap support for F6VP69 as seed ortholog is 100%.
Bootstrap support for F1RYS8 as seed ortholog is 100%.

Group of orthologs #3895. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.scrofa:121

H2XZN8              	100.00%		F1S687              	100.00%
Bootstrap support for H2XZN8 as seed ortholog is 99%.
Bootstrap support for F1S687 as seed ortholog is 100%.

Group of orthologs #3896. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.scrofa:97

H2Y0A0              	100.00%		P04178              	100.00%
Bootstrap support for H2Y0A0 as seed ortholog is 100%.
Bootstrap support for P04178 as seed ortholog is 99%.

Group of orthologs #3897. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:116

F7B2Y0              	100.00%		F1SP56              	100.00%
                    	       		F1SP54              	75.07%
Bootstrap support for F7B2Y0 as seed ortholog is 100%.
Bootstrap support for F1SP56 as seed ortholog is 99%.

Group of orthologs #3898. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:173

F7BPR4              	100.00%		I3LQF6              	100.00%
                    	       		F1SF36              	14.93%
Bootstrap support for F7BPR4 as seed ortholog is 100%.
Bootstrap support for I3LQF6 as seed ortholog is 100%.

Group of orthologs #3899. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:173

F6R0X3              	100.00%		F1SL87              	100.00%
Bootstrap support for F6R0X3 as seed ortholog is 100%.
Bootstrap support for F1SL87 as seed ortholog is 100%.

Group of orthologs #3900. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:99

F7BHB8              	100.00%		F1RR67              	100.00%
Bootstrap support for F7BHB8 as seed ortholog is 100%.
Bootstrap support for F1RR67 as seed ortholog is 99%.

Group of orthologs #3901. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:173

H2XV81              	100.00%		F1RNU7              	100.00%
Bootstrap support for H2XV81 as seed ortholog is 100%.
Bootstrap support for F1RNU7 as seed ortholog is 100%.

Group of orthologs #3902. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:173

F7BPC2              	100.00%		F1S793              	100.00%
Bootstrap support for F7BPC2 as seed ortholog is 100%.
Bootstrap support for F1S793 as seed ortholog is 100%.

Group of orthologs #3903. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:173

F6XFG7              	100.00%		F1STT0              	100.00%
Bootstrap support for F6XFG7 as seed ortholog is 100%.
Bootstrap support for F1STT0 as seed ortholog is 100%.

Group of orthologs #3904. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:173

F6W0Q4              	100.00%		I3LA04              	100.00%
Bootstrap support for F6W0Q4 as seed ortholog is 100%.
Bootstrap support for I3LA04 as seed ortholog is 100%.

Group of orthologs #3905. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:173

H2XRT6              	100.00%		F1S765              	100.00%
Bootstrap support for H2XRT6 as seed ortholog is 100%.
Bootstrap support for F1S765 as seed ortholog is 100%.

Group of orthologs #3906. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:173

F6URY8              	100.00%		I3LU71              	100.00%
Bootstrap support for F6URY8 as seed ortholog is 100%.
Bootstrap support for I3LU71 as seed ortholog is 100%.

Group of orthologs #3907. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.scrofa:173

F6VUV2              	100.00%		I3LSR7              	100.00%
Bootstrap support for F6VUV2 as seed ortholog is 88%.
Bootstrap support for I3LSR7 as seed ortholog is 100%.

Group of orthologs #3908. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.scrofa:11

H2XXW6              	100.00%		F1SJX5              	100.00%
Bootstrap support for H2XXW6 as seed ortholog is 99%.
Bootstrap support for F1SJX5 as seed ortholog is 65%.
Alternative seed ortholog is F1SDN9 (11 bits away from this cluster)

Group of orthologs #3909. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 S.scrofa:49

F6YCN8              	100.00%		P02587              	100.00%
Bootstrap support for F6YCN8 as seed ortholog is 75%.
Bootstrap support for P02587 as seed ortholog is 98%.

Group of orthologs #3910. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 S.scrofa:173

F7ADV8              	100.00%		K7GK86              	100.00%
Bootstrap support for F7ADV8 as seed ortholog is 100%.
Bootstrap support for K7GK86 as seed ortholog is 100%.

Group of orthologs #3911. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 S.scrofa:85

H2XPQ8              	100.00%		I3LPG0              	100.00%
Bootstrap support for H2XPQ8 as seed ortholog is 91%.
Bootstrap support for I3LPG0 as seed ortholog is 99%.

Group of orthologs #3912. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 S.scrofa:172

F6U8W0              	100.00%		C5H0C6              	100.00%
                    	       		F1SCG8              	13.14%
Bootstrap support for F6U8W0 as seed ortholog is 100%.
Bootstrap support for C5H0C6 as seed ortholog is 100%.

Group of orthologs #3913. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 S.scrofa:172

F6ZLY9              	100.00%		F1RLB5              	100.00%
Bootstrap support for F6ZLY9 as seed ortholog is 100%.
Bootstrap support for F1RLB5 as seed ortholog is 100%.

Group of orthologs #3914. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 S.scrofa:172

F7AAL8              	100.00%		I3LE43              	100.00%
Bootstrap support for F7AAL8 as seed ortholog is 100%.
Bootstrap support for I3LE43 as seed ortholog is 100%.

Group of orthologs #3915. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.scrofa:63

F6PMB4              	100.00%		F1SNQ4              	100.00%
                    	       		F1SG84              	23.35%
                    	       		K7GRC8              	11.68%
                    	       		I3L7N1              	10.66%
                    	       		F1SPW6              	10.41%
                    	       		F1SPV5              	10.15%
                    	       		F1SPV9              	9.90%
                    	       		F1SPW4              	9.39%
                    	       		F1SPW5              	9.14%
                    	       		K7GMH2              	7.36%
                    	       		I3LH71              	6.60%
                    	       		F1SPV8              	6.35%
Bootstrap support for F6PMB4 as seed ortholog is 100%.
Bootstrap support for F1SNQ4 as seed ortholog is 98%.

Group of orthologs #3916. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.scrofa:171

F7BLX7              	100.00%		F1S3V4              	100.00%
                    	       		F1SKR9              	73.39%
                    	       		I3LLB7              	72.41%
                    	       		F1S916              	66.81%
Bootstrap support for F7BLX7 as seed ortholog is 100%.
Bootstrap support for F1S3V4 as seed ortholog is 100%.

Group of orthologs #3917. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.scrofa:171

F6YS12              	100.00%		I3LSG2              	100.00%
F6YS23              	60.43%		
Bootstrap support for F6YS12 as seed ortholog is 100%.
Bootstrap support for I3LSG2 as seed ortholog is 100%.

Group of orthologs #3918. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.scrofa:171

H2XWE7              	100.00%		F2Z5Q8              	100.00%
                    	       		I3LIK0              	15.79%
Bootstrap support for H2XWE7 as seed ortholog is 100%.
Bootstrap support for F2Z5Q8 as seed ortholog is 100%.

Group of orthologs #3919. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 S.scrofa:171

F6U3B3              	100.00%		F1RRS4              	100.00%
Bootstrap support for F6U3B3 as seed ortholog is 84%.
Bootstrap support for F1RRS4 as seed ortholog is 100%.

Group of orthologs #3920. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.scrofa:171

F6RSZ1              	100.00%		F1S2U7              	100.00%
Bootstrap support for F6RSZ1 as seed ortholog is 100%.
Bootstrap support for F1S2U7 as seed ortholog is 100%.

Group of orthologs #3921. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.scrofa:171

H2XQJ8              	100.00%		F1RFB9              	100.00%
Bootstrap support for H2XQJ8 as seed ortholog is 100%.
Bootstrap support for F1RFB9 as seed ortholog is 100%.

Group of orthologs #3922. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.scrofa:171

H2XVJ4              	100.00%		F1RFC8              	100.00%
Bootstrap support for H2XVJ4 as seed ortholog is 100%.
Bootstrap support for F1RFC8 as seed ortholog is 100%.

Group of orthologs #3923. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.scrofa:171

H2XXH2              	100.00%		F1RRL3              	100.00%
Bootstrap support for H2XXH2 as seed ortholog is 100%.
Bootstrap support for F1RRL3 as seed ortholog is 100%.

Group of orthologs #3924. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.scrofa:171

H2XTQ6              	100.00%		I3L5D8              	100.00%
Bootstrap support for H2XTQ6 as seed ortholog is 100%.
Bootstrap support for I3L5D8 as seed ortholog is 100%.

Group of orthologs #3925. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 S.scrofa:171

H2XT41              	100.00%		Q52NJ0              	100.00%
Bootstrap support for H2XT41 as seed ortholog is 100%.
Bootstrap support for Q52NJ0 as seed ortholog is 100%.

Group of orthologs #3926. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.scrofa:71

F6XIM3              	100.00%		F1SDF3              	100.00%
F6XIJ2              	100.00%		P49922              	100.00%
Q869J2              	59.13%		
D2KZ69              	9.29%		
Bootstrap support for F6XIM3 as seed ortholog is 99%.
Bootstrap support for F6XIJ2 as seed ortholog is 99%.
Bootstrap support for F1SDF3 as seed ortholog is 97%.
Bootstrap support for P49922 as seed ortholog is 94%.

Group of orthologs #3927. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.scrofa:170

F6Y4L7              	100.00%		A4U9C9              	100.00%
                    	       		I3LS37              	91.88%
                    	       		F1RIF4              	18.45%
Bootstrap support for F6Y4L7 as seed ortholog is 100%.
Bootstrap support for A4U9C9 as seed ortholog is 100%.

Group of orthologs #3928. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.scrofa:170

F6T8A4              	100.00%		F1SEH7              	100.00%
                    	       		I3L6I0              	26.99%
Bootstrap support for F6T8A4 as seed ortholog is 100%.
Bootstrap support for F1SEH7 as seed ortholog is 100%.

Group of orthologs #3929. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.scrofa:170

F6VKW3              	100.00%		F1RIY6              	100.00%
Bootstrap support for F6VKW3 as seed ortholog is 100%.
Bootstrap support for F1RIY6 as seed ortholog is 100%.

Group of orthologs #3930. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.scrofa:170

F6QLN4              	100.00%		F1S827              	100.00%
Bootstrap support for F6QLN4 as seed ortholog is 100%.
Bootstrap support for F1S827 as seed ortholog is 100%.

Group of orthologs #3931. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 S.scrofa:106

F6XVZ5              	100.00%		F1S543              	100.00%
Bootstrap support for F6XVZ5 as seed ortholog is 84%.
Bootstrap support for F1S543 as seed ortholog is 99%.

Group of orthologs #3932. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.scrofa:170

H2XPL7              	100.00%		F1RKH0              	100.00%
Bootstrap support for H2XPL7 as seed ortholog is 100%.
Bootstrap support for F1RKH0 as seed ortholog is 100%.

Group of orthologs #3933. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.scrofa:71

H2XJN2              	100.00%		F1S262              	100.00%
Bootstrap support for H2XJN2 as seed ortholog is 100%.
Bootstrap support for F1S262 as seed ortholog is 98%.

Group of orthologs #3934. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 S.scrofa:170

H2XJZ7              	100.00%		F1SSN7              	100.00%
Bootstrap support for H2XJZ7 as seed ortholog is 100%.
Bootstrap support for F1SSN7 as seed ortholog is 100%.

Group of orthologs #3935. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.scrofa:66

F6W4Z8              	100.00%		I3LNI4              	100.00%
                    	       		F1RPE2              	10.88%
                    	       		F1RWZ8              	6.69%
Bootstrap support for F6W4Z8 as seed ortholog is 100%.
Bootstrap support for I3LNI4 as seed ortholog is 99%.

Group of orthologs #3936. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 S.scrofa:169

F7B8Y3              	100.00%		F1SJ25              	100.00%
                    	       		F1SEZ7              	14.42%
Bootstrap support for F7B8Y3 as seed ortholog is 100%.
Bootstrap support for F1SJ25 as seed ortholog is 100%.

Group of orthologs #3937. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 S.scrofa:169

F6W1E1              	100.00%		F1RIT5              	100.00%
Bootstrap support for F6W1E1 as seed ortholog is 100%.
Bootstrap support for F1RIT5 as seed ortholog is 100%.

Group of orthologs #3938. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 S.scrofa:169

F6VGF9              	100.00%		F1RMB0              	100.00%
Bootstrap support for F6VGF9 as seed ortholog is 100%.
Bootstrap support for F1RMB0 as seed ortholog is 100%.

Group of orthologs #3939. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 S.scrofa:169

H2XJM4              	100.00%		F1RW48              	100.00%
Bootstrap support for H2XJM4 as seed ortholog is 100%.
Bootstrap support for F1RW48 as seed ortholog is 100%.

Group of orthologs #3940. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 S.scrofa:169

F7AI05              	100.00%		F1SAR5              	100.00%
Bootstrap support for F7AI05 as seed ortholog is 100%.
Bootstrap support for F1SAR5 as seed ortholog is 100%.

Group of orthologs #3941. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 S.scrofa:6

F6S5F0              	100.00%		I3LCQ4              	100.00%
Bootstrap support for F6S5F0 as seed ortholog is 100%.
Bootstrap support for I3LCQ4 as seed ortholog is 57%.
Alternative seed ortholog is F1RPA9 (6 bits away from this cluster)

Group of orthologs #3942. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.scrofa:119

H2XXC4              	100.00%		F1S350              	100.00%
Bootstrap support for H2XXC4 as seed ortholog is 99%.
Bootstrap support for F1S350 as seed ortholog is 100%.

Group of orthologs #3943. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 S.scrofa:168

F6S2Y7              	100.00%		F1S3C3              	100.00%
Bootstrap support for F6S2Y7 as seed ortholog is 100%.
Bootstrap support for F1S3C3 as seed ortholog is 100%.

Group of orthologs #3944. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 S.scrofa:168

F6XMZ3              	100.00%		F1RMA2              	100.00%
Bootstrap support for F6XMZ3 as seed ortholog is 100%.
Bootstrap support for F1RMA2 as seed ortholog is 100%.

Group of orthologs #3945. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 S.scrofa:168

F6VKK3              	100.00%		F1RZY6              	100.00%
Bootstrap support for F6VKK3 as seed ortholog is 100%.
Bootstrap support for F1RZY6 as seed ortholog is 100%.

Group of orthologs #3946. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 S.scrofa:168

F6ZV18              	100.00%		F1RNA7              	100.00%
Bootstrap support for F6ZV18 as seed ortholog is 100%.
Bootstrap support for F1RNA7 as seed ortholog is 100%.

Group of orthologs #3947. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 S.scrofa:168

F7A2F3              	100.00%		F1SDN7              	100.00%
Bootstrap support for F7A2F3 as seed ortholog is 100%.
Bootstrap support for F1SDN7 as seed ortholog is 100%.

Group of orthologs #3948. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 S.scrofa:168

F6Q0V4              	100.00%		I3LJX1              	100.00%
Bootstrap support for F6Q0V4 as seed ortholog is 100%.
Bootstrap support for I3LJX1 as seed ortholog is 100%.

Group of orthologs #3949. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 S.scrofa:168

F6ZA98              	100.00%		F1SMF3              	100.00%
Bootstrap support for F6ZA98 as seed ortholog is 100%.
Bootstrap support for F1SMF3 as seed ortholog is 100%.

Group of orthologs #3950. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 S.scrofa:168

H2XK95              	100.00%		F1SCX5              	100.00%
Bootstrap support for H2XK95 as seed ortholog is 100%.
Bootstrap support for F1SCX5 as seed ortholog is 100%.

Group of orthologs #3951. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 S.scrofa:168

H2XRC6              	100.00%		F1SKY0              	100.00%
Bootstrap support for H2XRC6 as seed ortholog is 100%.
Bootstrap support for F1SKY0 as seed ortholog is 100%.

Group of orthologs #3952. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 S.scrofa:168

F6ZFV5              	100.00%		I3LRK6              	100.00%
Bootstrap support for F6ZFV5 as seed ortholog is 100%.
Bootstrap support for I3LRK6 as seed ortholog is 100%.

Group of orthologs #3953. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 S.scrofa:168

Q1RL87              	100.00%		I3LA10              	100.00%
Bootstrap support for Q1RL87 as seed ortholog is 100%.
Bootstrap support for I3LA10 as seed ortholog is 100%.

Group of orthologs #3954. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.scrofa:44

F6TTN6              	100.00%		Q06AA5              	100.00%
F7AY51              	31.47%		F1RZ00              	39.70%
F6T788              	24.13%		F1S628              	6.57%
F6XBI2              	18.53%		
Bootstrap support for F6TTN6 as seed ortholog is 96%.
Bootstrap support for Q06AA5 as seed ortholog is 92%.

Group of orthologs #3955. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.scrofa:167

F6PU23              	100.00%		I3LCK8              	100.00%
                    	       		F1SRW8              	68.29%
Bootstrap support for F6PU23 as seed ortholog is 100%.
Bootstrap support for I3LCK8 as seed ortholog is 100%.

Group of orthologs #3956. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.scrofa:167

F6W0Z5              	100.00%		I3LCV1              	100.00%
                    	       		F1S3V0              	25.52%
Bootstrap support for F6W0Z5 as seed ortholog is 100%.
Bootstrap support for I3LCV1 as seed ortholog is 100%.

Group of orthologs #3957. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.scrofa:167

F6Q6C3              	100.00%		F1SM93              	100.00%
Bootstrap support for F6Q6C3 as seed ortholog is 100%.
Bootstrap support for F1SM93 as seed ortholog is 100%.

Group of orthologs #3958. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.scrofa:167

F6VXS0              	100.00%		F1SMN6              	100.00%
Bootstrap support for F6VXS0 as seed ortholog is 100%.
Bootstrap support for F1SMN6 as seed ortholog is 100%.

Group of orthologs #3959. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 S.scrofa:55

H2Y296              	100.00%		F1SEG0              	100.00%
Bootstrap support for H2Y296 as seed ortholog is 100%.
Bootstrap support for F1SEG0 as seed ortholog is 99%.

Group of orthologs #3960. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.scrofa:166

F7B8A5              	100.00%		F1S1K0              	100.00%
                    	       		F1S1K1              	89.05%
                    	       		F1S874              	15.48%
Bootstrap support for F7B8A5 as seed ortholog is 100%.
Bootstrap support for F1S1K0 as seed ortholog is 100%.

Group of orthologs #3961. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.scrofa:166

H2XLM9              	100.00%		F1RW55              	100.00%
                    	       		K7GRQ4              	33.16%
Bootstrap support for H2XLM9 as seed ortholog is 100%.
Bootstrap support for F1RW55 as seed ortholog is 100%.

Group of orthologs #3962. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.scrofa:166

H2XRS9              	100.00%		Q28955              	100.00%
                    	       		I3LK36              	62.15%
Bootstrap support for H2XRS9 as seed ortholog is 100%.
Bootstrap support for Q28955 as seed ortholog is 100%.

Group of orthologs #3963. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.scrofa:166

F6RT01              	100.00%		F1RWH7              	100.00%
Bootstrap support for F6RT01 as seed ortholog is 100%.
Bootstrap support for F1RWH7 as seed ortholog is 100%.

Group of orthologs #3964. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.scrofa:166

F6WMZ2              	100.00%		F1RRZ2              	100.00%
Bootstrap support for F6WMZ2 as seed ortholog is 100%.
Bootstrap support for F1RRZ2 as seed ortholog is 100%.

Group of orthologs #3965. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.scrofa:166

F6Y206              	100.00%		F1RTB0              	100.00%
Bootstrap support for F6Y206 as seed ortholog is 100%.
Bootstrap support for F1RTB0 as seed ortholog is 100%.

Group of orthologs #3966. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.scrofa:166

F7BMN7              	100.00%		F1RQ93              	100.00%
Bootstrap support for F7BMN7 as seed ortholog is 100%.
Bootstrap support for F1RQ93 as seed ortholog is 100%.

Group of orthologs #3967. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.scrofa:117

F6VR17              	100.00%		F1SLA7              	100.00%
Bootstrap support for F6VR17 as seed ortholog is 100%.
Bootstrap support for F1SLA7 as seed ortholog is 100%.

Group of orthologs #3968. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.scrofa:166

F7AW28              	100.00%		F1SBT3              	100.00%
Bootstrap support for F7AW28 as seed ortholog is 100%.
Bootstrap support for F1SBT3 as seed ortholog is 100%.

Group of orthologs #3969. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.scrofa:166

F6ZIQ8              	100.00%		F2Z5K1              	100.00%
Bootstrap support for F6ZIQ8 as seed ortholog is 100%.
Bootstrap support for F2Z5K1 as seed ortholog is 100%.

Group of orthologs #3970. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 S.scrofa:166

F7B1K2              	100.00%		I3LUZ5              	100.00%
Bootstrap support for F7B1K2 as seed ortholog is 76%.
Bootstrap support for I3LUZ5 as seed ortholog is 100%.

Group of orthologs #3971. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 S.scrofa:166

H2Y216              	100.00%		P68266              	100.00%
Bootstrap support for H2Y216 as seed ortholog is 100%.
Bootstrap support for P68266 as seed ortholog is 100%.

Group of orthologs #3972. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.scrofa:7

H2XQX8              	100.00%		F1RQN9              	100.00%
H2XNN0              	7.20%		F1SDZ1              	19.08%
Bootstrap support for H2XQX8 as seed ortholog is 91%.
Bootstrap support for F1RQN9 as seed ortholog is 48%.
Alternative seed ortholog is I3LBS0 (7 bits away from this cluster)

Group of orthologs #3973. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 S.scrofa:165

H2XSN9              	100.00%		F1S1V3              	100.00%
                    	       		I3L6E7              	14.46%
Bootstrap support for H2XSN9 as seed ortholog is 100%.
Bootstrap support for F1S1V3 as seed ortholog is 100%.

Group of orthologs #3974. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.scrofa:59

H2XNX1              	100.00%		F1S9X8              	100.00%
                    	       		F2Z527              	38.74%
Bootstrap support for H2XNX1 as seed ortholog is 99%.
Bootstrap support for F1S9X8 as seed ortholog is 98%.

Group of orthologs #3975. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 S.scrofa:165

H2XR06              	100.00%		F1SBY3              	100.00%
                    	       		F1RPV2              	22.29%
Bootstrap support for H2XR06 as seed ortholog is 100%.
Bootstrap support for F1SBY3 as seed ortholog is 100%.

Group of orthologs #3976. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 S.scrofa:89

F6UN42              	100.00%		F1RKG8              	100.00%
Bootstrap support for F6UN42 as seed ortholog is 100%.
Bootstrap support for F1RKG8 as seed ortholog is 99%.

Group of orthologs #3977. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.scrofa:165

F6T5W3              	100.00%		F1RYI9              	100.00%
Bootstrap support for F6T5W3 as seed ortholog is 99%.
Bootstrap support for F1RYI9 as seed ortholog is 100%.

Group of orthologs #3978. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 S.scrofa:165

F6WUB5              	100.00%		F1RYL1              	100.00%
Bootstrap support for F6WUB5 as seed ortholog is 100%.
Bootstrap support for F1RYL1 as seed ortholog is 100%.

Group of orthologs #3979. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 S.scrofa:165

F7BPC9              	100.00%		F1RJZ4              	100.00%
Bootstrap support for F7BPC9 as seed ortholog is 100%.
Bootstrap support for F1RJZ4 as seed ortholog is 100%.

Group of orthologs #3980. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 S.scrofa:165

F6VQ55              	100.00%		F1SDQ3              	100.00%
Bootstrap support for F6VQ55 as seed ortholog is 100%.
Bootstrap support for F1SDQ3 as seed ortholog is 100%.

Group of orthologs #3981. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 S.scrofa:165

F6UB97              	100.00%		F1SSU9              	100.00%
Bootstrap support for F6UB97 as seed ortholog is 100%.
Bootstrap support for F1SSU9 as seed ortholog is 100%.

Group of orthologs #3982. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 S.scrofa:109

H2XY81              	100.00%		F1S8H0              	100.00%
Bootstrap support for H2XY81 as seed ortholog is 100%.
Bootstrap support for F1S8H0 as seed ortholog is 100%.

Group of orthologs #3983. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.scrofa:165

H2Y2A8              	100.00%		F1SI13              	100.00%
Bootstrap support for H2Y2A8 as seed ortholog is 100%.
Bootstrap support for F1SI13 as seed ortholog is 100%.

Group of orthologs #3984. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 S.scrofa:165

Q1RL82              	100.00%		F1SN88              	100.00%
Bootstrap support for Q1RL82 as seed ortholog is 100%.
Bootstrap support for F1SN88 as seed ortholog is 100%.

Group of orthologs #3985. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:164

F6SQ23              	100.00%		F1S6F1              	100.00%
F6VKX9              	36.95%		F1SKZ6              	19.90%
Bootstrap support for F6SQ23 as seed ortholog is 100%.
Bootstrap support for F1S6F1 as seed ortholog is 100%.

Group of orthologs #3986. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:164

H2Y1J7              	100.00%		F1S187              	100.00%
                    	       		G8ENL4              	20.87%
                    	       		F1RFI8              	13.64%
Bootstrap support for H2Y1J7 as seed ortholog is 100%.
Bootstrap support for F1S187 as seed ortholog is 100%.

Group of orthologs #3987. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:67

H2XWE8              	100.00%		F1SLL5              	100.00%
                    	       		B8XSI7              	37.05%
                    	       		F1S785              	25.18%
Bootstrap support for H2XWE8 as seed ortholog is 100%.
Bootstrap support for F1SLL5 as seed ortholog is 97%.

Group of orthologs #3988. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:164

F6T9U4              	100.00%		F1RJR7              	100.00%
                    	       		I3LGT2              	13.58%
Bootstrap support for F6T9U4 as seed ortholog is 100%.
Bootstrap support for F1RJR7 as seed ortholog is 100%.

Group of orthologs #3989. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:164

H2XJF8              	100.00%		F1S7N6              	100.00%
                    	       		F1RFX3              	7.38%
Bootstrap support for H2XJF8 as seed ortholog is 100%.
Bootstrap support for F1S7N6 as seed ortholog is 100%.

Group of orthologs #3990. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:32

F6ST26              	100.00%		P05027              	100.00%
                    	       		F1ST41              	10.38%
Bootstrap support for F6ST26 as seed ortholog is 100%.
Bootstrap support for P05027 as seed ortholog is 79%.

Group of orthologs #3991. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:164

F6RXS5              	100.00%		F1RJM8              	100.00%
Bootstrap support for F6RXS5 as seed ortholog is 100%.
Bootstrap support for F1RJM8 as seed ortholog is 100%.

Group of orthologs #3992. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:164

F6QN05              	100.00%		F1RP33              	100.00%
Bootstrap support for F6QN05 as seed ortholog is 100%.
Bootstrap support for F1RP33 as seed ortholog is 100%.

Group of orthologs #3993. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.scrofa:98

F6Y2V8              	100.00%		D2DGZ0              	100.00%
Bootstrap support for F6Y2V8 as seed ortholog is 94%.
Bootstrap support for D2DGZ0 as seed ortholog is 99%.

Group of orthologs #3994. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:164

F6U3A5              	100.00%		F1S313              	100.00%
Bootstrap support for F6U3A5 as seed ortholog is 100%.
Bootstrap support for F1S313 as seed ortholog is 100%.

Group of orthologs #3995. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:164

F6U7R3              	100.00%		F1SC86              	100.00%
Bootstrap support for F6U7R3 as seed ortholog is 100%.
Bootstrap support for F1SC86 as seed ortholog is 100%.

Group of orthologs #3996. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:95

H2XK25              	100.00%		F1RMM2              	100.00%
Bootstrap support for H2XK25 as seed ortholog is 99%.
Bootstrap support for F1RMM2 as seed ortholog is 100%.

Group of orthologs #3997. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:164

H2XPJ3              	100.00%		F1RR73              	100.00%
Bootstrap support for H2XPJ3 as seed ortholog is 100%.
Bootstrap support for F1RR73 as seed ortholog is 100%.

Group of orthologs #3998. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:164

F7ATY3              	100.00%		F1S5Y9              	100.00%
Bootstrap support for F7ATY3 as seed ortholog is 100%.
Bootstrap support for F1S5Y9 as seed ortholog is 100%.

Group of orthologs #3999. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:33

H2XW11              	100.00%		F1SFX3              	100.00%
Bootstrap support for H2XW11 as seed ortholog is 96%.
Bootstrap support for F1SFX3 as seed ortholog is 83%.

Group of orthologs #4000. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:164

H2XWA4              	100.00%		F1SJ65              	100.00%
Bootstrap support for H2XWA4 as seed ortholog is 100%.
Bootstrap support for F1SJ65 as seed ortholog is 100%.

Group of orthologs #4001. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 S.scrofa:164

H2XWN0              	100.00%		I3L5J2              	100.00%
Bootstrap support for H2XWN0 as seed ortholog is 100%.
Bootstrap support for I3L5J2 as seed ortholog is 100%.

Group of orthologs #4002. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.scrofa:163

F6QYI8              	100.00%		F1S2F1              	100.00%
F7BEW6              	22.07%		
Bootstrap support for F6QYI8 as seed ortholog is 100%.
Bootstrap support for F1S2F1 as seed ortholog is 100%.

Group of orthologs #4003. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 S.scrofa:163

F6S714              	100.00%		F1SN40              	100.00%
                    	       		F1SN41              	100.00%
Bootstrap support for F6S714 as seed ortholog is 79%.
Bootstrap support for F1SN40 as seed ortholog is 100%.
Bootstrap support for F1SN41 as seed ortholog is 100%.

Group of orthologs #4004. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.scrofa:163

F6TLT5              	100.00%		F1SIP9              	100.00%
                    	       		F1SIR4              	96.32%
Bootstrap support for F6TLT5 as seed ortholog is 100%.
Bootstrap support for F1SIP9 as seed ortholog is 100%.

Group of orthologs #4005. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.scrofa:93

F6X1A2              	100.00%		F1S8R0              	100.00%
                    	       		I3L695              	98.65%
Bootstrap support for F6X1A2 as seed ortholog is 100%.
Bootstrap support for F1S8R0 as seed ortholog is 98%.

Group of orthologs #4006. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 S.scrofa:37

F6SJR0              	100.00%		F1SVA0              	100.00%
F7BH23              	8.47%		
Bootstrap support for F6SJR0 as seed ortholog is 55%.
Alternative seed ortholog is F6ZB26 (4 bits away from this cluster)
Bootstrap support for F1SVA0 as seed ortholog is 88%.

Group of orthologs #4007. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.scrofa:163

Q1RL40              	100.00%		F6Q8T7              	100.00%
                    	       		I3LH30              	26.67%
Bootstrap support for Q1RL40 as seed ortholog is 100%.
Bootstrap support for F6Q8T7 as seed ortholog is 100%.

Group of orthologs #4008. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.scrofa:163

F6RKZ1              	100.00%		F1RNG8              	100.00%
Bootstrap support for F6RKZ1 as seed ortholog is 100%.
Bootstrap support for F1RNG8 as seed ortholog is 100%.

Group of orthologs #4009. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:65

H2XLZ2              	100.00%		F1RQ06              	100.00%
Bootstrap support for H2XLZ2 as seed ortholog is 100%.
Bootstrap support for F1RQ06 as seed ortholog is 99%.

Group of orthologs #4010. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.scrofa:163

H2Y2S5              	100.00%		F1RLH4              	100.00%
Bootstrap support for H2Y2S5 as seed ortholog is 100%.
Bootstrap support for F1RLH4 as seed ortholog is 100%.

Group of orthologs #4011. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.scrofa:163

F6QKK4              	100.00%		K7GKI8              	100.00%
Bootstrap support for F6QKK4 as seed ortholog is 100%.
Bootstrap support for K7GKI8 as seed ortholog is 100%.

Group of orthologs #4012. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.scrofa:163

F6U5E5              	100.00%		Q29036              	100.00%
Bootstrap support for F6U5E5 as seed ortholog is 100%.
Bootstrap support for Q29036 as seed ortholog is 100%.

Group of orthologs #4013. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.scrofa:163

F6WHL2              	100.00%		I3LUT8              	100.00%
Bootstrap support for F6WHL2 as seed ortholog is 100%.
Bootstrap support for I3LUT8 as seed ortholog is 100%.

Group of orthologs #4014. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:163

F6YJ18              	100.00%		I3LP89              	100.00%
Bootstrap support for F6YJ18 as seed ortholog is 99%.
Bootstrap support for I3LP89 as seed ortholog is 100%.

Group of orthologs #4015. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 S.scrofa:163

F6XYQ4              	100.00%		I3LUH9              	100.00%
Bootstrap support for F6XYQ4 as seed ortholog is 100%.
Bootstrap support for I3LUH9 as seed ortholog is 100%.

Group of orthologs #4016. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 S.scrofa:162

F6YHI5              	100.00%		F1RGL9              	100.00%
                    	       		F1RGA6              	26.35%
Bootstrap support for F6YHI5 as seed ortholog is 100%.
Bootstrap support for F1RGL9 as seed ortholog is 100%.

Group of orthologs #4017. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 S.scrofa:162

F6XB46              	100.00%		I3LNP7              	100.00%
                    	       		F1SBS2              	8.02%
Bootstrap support for F6XB46 as seed ortholog is 100%.
Bootstrap support for I3LNP7 as seed ortholog is 100%.

Group of orthologs #4018. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 S.scrofa:86

F6PWH2              	100.00%		A9CQL8              	100.00%
Bootstrap support for F6PWH2 as seed ortholog is 100%.
Bootstrap support for A9CQL8 as seed ortholog is 99%.

Group of orthologs #4019. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 S.scrofa:162

F6TDH1              	100.00%		F1RHK3              	100.00%
Bootstrap support for F6TDH1 as seed ortholog is 100%.
Bootstrap support for F1RHK3 as seed ortholog is 100%.

Group of orthologs #4020. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.scrofa:100

F6Y3J4              	100.00%		F1RFE4              	100.00%
Bootstrap support for F6Y3J4 as seed ortholog is 96%.
Bootstrap support for F1RFE4 as seed ortholog is 99%.

Group of orthologs #4021. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 S.scrofa:162

F6PSG3              	100.00%		F1SKB6              	100.00%
Bootstrap support for F6PSG3 as seed ortholog is 100%.
Bootstrap support for F1SKB6 as seed ortholog is 100%.

Group of orthologs #4022. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:162

F6YV26              	100.00%		F1STJ6              	100.00%
Bootstrap support for F6YV26 as seed ortholog is 99%.
Bootstrap support for F1STJ6 as seed ortholog is 100%.

Group of orthologs #4023. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.scrofa:162

F6T485              	100.00%		I3LL38              	100.00%
Bootstrap support for F6T485 as seed ortholog is 99%.
Bootstrap support for I3LL38 as seed ortholog is 100%.

Group of orthologs #4024. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 S.scrofa:162

F6YB51              	100.00%		I3L7P0              	100.00%
Bootstrap support for F6YB51 as seed ortholog is 100%.
Bootstrap support for I3L7P0 as seed ortholog is 100%.

Group of orthologs #4025. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 S.scrofa:162

F7AX27              	100.00%		F1STB2              	100.00%
Bootstrap support for F7AX27 as seed ortholog is 49%.
Alternative seed ortholog is H2XW88 (1 bits away from this cluster)
Bootstrap support for F1STB2 as seed ortholog is 100%.

Group of orthologs #4026. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 S.scrofa:162

F6YRT2              	100.00%		I3LMV3              	100.00%
Bootstrap support for F6YRT2 as seed ortholog is 100%.
Bootstrap support for I3LMV3 as seed ortholog is 100%.

Group of orthologs #4027. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 S.scrofa:162

H2Y1N7              	100.00%		P36968              	100.00%
Bootstrap support for H2Y1N7 as seed ortholog is 99%.
Bootstrap support for P36968 as seed ortholog is 100%.

Group of orthologs #4028. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:116

F6Z3A0              	100.00%		F1RL37              	100.00%
                    	       		I3L5Q9              	55.76%
                    	       		F1RL35              	28.97%
Bootstrap support for F6Z3A0 as seed ortholog is 99%.
Bootstrap support for F1RL37 as seed ortholog is 100%.

Group of orthologs #4029. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.scrofa:161

H2XKP6              	100.00%		A1XQU3              	100.00%
                    	       		I3LIZ8              	95.74%
                    	       		I3LFN7              	73.26%
Bootstrap support for H2XKP6 as seed ortholog is 100%.
Bootstrap support for A1XQU3 as seed ortholog is 100%.

Group of orthologs #4030. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.scrofa:52

F7BIU1              	100.00%		Q5GN48              	100.00%
                    	       		F1SV22              	5.62%
                    	       		F1RZU8              	5.17%
Bootstrap support for F7BIU1 as seed ortholog is 100%.
Bootstrap support for Q5GN48 as seed ortholog is 53%.
Alternative seed ortholog is F1S7X0 (52 bits away from this cluster)

Group of orthologs #4031. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.scrofa:161

F6RJQ4              	100.00%		A3KCL7              	100.00%
                    	       		P00371              	16.88%
Bootstrap support for F6RJQ4 as seed ortholog is 100%.
Bootstrap support for A3KCL7 as seed ortholog is 100%.

Group of orthologs #4032. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.scrofa:161

H2XNI6              	100.00%		F1S150              	100.00%
                    	       		I3LNK9              	89.11%
Bootstrap support for H2XNI6 as seed ortholog is 100%.
Bootstrap support for F1S150 as seed ortholog is 100%.

Group of orthologs #4033. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 S.scrofa:77

H2Y106              	100.00%		I3LC88              	100.00%
                    	       		I3LM05              	17.64%
Bootstrap support for H2Y106 as seed ortholog is 89%.
Bootstrap support for I3LC88 as seed ortholog is 99%.

Group of orthologs #4034. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.scrofa:161

F6UC03              	100.00%		F1RK24              	100.00%
Bootstrap support for F6UC03 as seed ortholog is 100%.
Bootstrap support for F1RK24 as seed ortholog is 100%.

Group of orthologs #4035. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.scrofa:161

F7BKJ3              	100.00%		F1RVL9              	100.00%
Bootstrap support for F7BKJ3 as seed ortholog is 100%.
Bootstrap support for F1RVL9 as seed ortholog is 100%.

Group of orthologs #4036. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.scrofa:161

H2XM98              	100.00%		F1RX61              	100.00%
Bootstrap support for H2XM98 as seed ortholog is 100%.
Bootstrap support for F1RX61 as seed ortholog is 100%.

Group of orthologs #4037. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.scrofa:161

F6UMX2              	100.00%		I3LA14              	100.00%
Bootstrap support for F6UMX2 as seed ortholog is 100%.
Bootstrap support for I3LA14 as seed ortholog is 100%.

Group of orthologs #4038. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.scrofa:161

F6T1X5              	100.00%		I3LF52              	100.00%
Bootstrap support for F6T1X5 as seed ortholog is 100%.
Bootstrap support for I3LF52 as seed ortholog is 100%.

Group of orthologs #4039. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.scrofa:79

F7BJW8              	100.00%		F1SRC2              	100.00%
Bootstrap support for F7BJW8 as seed ortholog is 92%.
Bootstrap support for F1SRC2 as seed ortholog is 87%.

Group of orthologs #4040. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.scrofa:161

F6V062              	100.00%		I3LT21              	100.00%
Bootstrap support for F6V062 as seed ortholog is 99%.
Bootstrap support for I3LT21 as seed ortholog is 100%.

Group of orthologs #4041. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.scrofa:161

H2XKH1              	100.00%		I3L6P3              	100.00%
Bootstrap support for H2XKH1 as seed ortholog is 100%.
Bootstrap support for I3L6P3 as seed ortholog is 100%.

Group of orthologs #4042. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 S.scrofa:161

H2XVJ2              	100.00%		F1SKN8              	100.00%
Bootstrap support for H2XVJ2 as seed ortholog is 100%.
Bootstrap support for F1SKN8 as seed ortholog is 100%.

Group of orthologs #4043. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 S.scrofa:160

H2XMB9              	100.00%		F1RWF6              	100.00%
                    	       		A1XQS5              	97.09%
                    	       		F1RZI0              	22.33%
                    	       		I3LG63              	11.65%
Bootstrap support for H2XMB9 as seed ortholog is 100%.
Bootstrap support for F1RWF6 as seed ortholog is 100%.

Group of orthologs #4044. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 S.scrofa:160

H2XTZ1              	100.00%		P62895              	100.00%
                    	       		I3LCB9              	79.37%
                    	       		F1RHI4              	57.14%
                    	       		I3LNY8              	23.81%
Bootstrap support for H2XTZ1 as seed ortholog is 99%.
Bootstrap support for P62895 as seed ortholog is 100%.

Group of orthologs #4045. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 S.scrofa:160

F6V7G7              	100.00%		F2Z553              	100.00%
                    	       		P61220              	82.19%
Bootstrap support for F6V7G7 as seed ortholog is 100%.
Bootstrap support for F2Z553 as seed ortholog is 100%.

Group of orthologs #4046. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 S.scrofa:160

F6QIF4              	100.00%		F1S027              	100.00%
Bootstrap support for F6QIF4 as seed ortholog is 100%.
Bootstrap support for F1S027 as seed ortholog is 100%.

Group of orthologs #4047. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 S.scrofa:160

F6XTP5              	100.00%		F1RUD9              	100.00%
Bootstrap support for F6XTP5 as seed ortholog is 100%.
Bootstrap support for F1RUD9 as seed ortholog is 100%.

Group of orthologs #4048. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 S.scrofa:160

F6SKW2              	100.00%		F1SLE2              	100.00%
Bootstrap support for F6SKW2 as seed ortholog is 100%.
Bootstrap support for F1SLE2 as seed ortholog is 100%.

Group of orthologs #4049. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.scrofa:51

F6TZL5              	100.00%		F1SPK8              	100.00%
Bootstrap support for F6TZL5 as seed ortholog is 94%.
Bootstrap support for F1SPK8 as seed ortholog is 93%.

Group of orthologs #4050. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 S.scrofa:160

H2XY73              	100.00%		F1SPB0              	100.00%
Bootstrap support for H2XY73 as seed ortholog is 100%.
Bootstrap support for F1SPB0 as seed ortholog is 100%.

Group of orthologs #4051. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 S.scrofa:160

F7BN02              	100.00%		I3LMH3              	100.00%
Bootstrap support for F7BN02 as seed ortholog is 100%.
Bootstrap support for I3LMH3 as seed ortholog is 100%.

Group of orthologs #4052. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:48

F6Y6P2              	100.00%		F1SIW2              	100.00%
                    	       		F1SBX2              	42.43%
                    	       		F1SPP4              	34.54%
                    	       		F1SPP5              	32.59%
                    	       		F1SBX4              	15.56%
                    	       		F1STD1              	11.24%
                    	       		I3LBY1              	10.68%
                    	       		F1RN15              	10.47%
                    	       		I3LVH0              	8.09%
                    	       		F1SNW1              	7.68%
                    	       		F1SSX9              	5.37%
Bootstrap support for F6Y6P2 as seed ortholog is 89%.
Bootstrap support for F1SIW2 as seed ortholog is 79%.

Group of orthologs #4053. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 S.scrofa:5

F6SJ02              	100.00%		F1SHY5              	100.00%
                    	       		F1SI01              	23.46%
                    	       		I3LKM1              	8.74%
                    	       		F1SUG0              	5.50%
Bootstrap support for F6SJ02 as seed ortholog is 48%.
Alternative seed ortholog is H2XY98 (2 bits away from this cluster)
Bootstrap support for F1SHY5 as seed ortholog is 53%.
Alternative seed ortholog is I3LD44 (5 bits away from this cluster)

Group of orthologs #4054. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 S.scrofa:98

F6V879              	100.00%		I3LGY0              	100.00%
                    	       		F1SF47              	12.90%
Bootstrap support for F6V879 as seed ortholog is 56%.
Alternative seed ortholog is F6R1D9 (5 bits away from this cluster)
Bootstrap support for I3LGY0 as seed ortholog is 99%.

Group of orthologs #4055. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 S.scrofa:159

F6X9L5              	100.00%		F1RVJ6              	100.00%
Bootstrap support for F6X9L5 as seed ortholog is 100%.
Bootstrap support for F1RVJ6 as seed ortholog is 100%.

Group of orthologs #4056. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 S.scrofa:159

H2XP53              	100.00%		F1SQK5              	100.00%
Bootstrap support for H2XP53 as seed ortholog is 100%.
Bootstrap support for F1SQK5 as seed ortholog is 100%.

Group of orthologs #4057. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.scrofa:158

F6X329              	100.00%		F1RX88              	100.00%
F7BDB7              	76.42%		F1RX90              	82.42%
Bootstrap support for F6X329 as seed ortholog is 100%.
Bootstrap support for F1RX88 as seed ortholog is 100%.

Group of orthologs #4058. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.scrofa:158

F6ZFJ3              	100.00%		F1RIB3              	100.00%
F6WGT4              	14.74%		
Bootstrap support for F6ZFJ3 as seed ortholog is 100%.
Bootstrap support for F1RIB3 as seed ortholog is 100%.

Group of orthologs #4059. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.scrofa:89

F6T4U7              	100.00%		I3LE94              	100.00%
F6ZUV3              	21.29%		
Bootstrap support for F6T4U7 as seed ortholog is 100%.
Bootstrap support for I3LE94 as seed ortholog is 99%.

Group of orthologs #4060. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.scrofa:158

F6XRM1              	100.00%		F1S710              	100.00%
Bootstrap support for F6XRM1 as seed ortholog is 100%.
Bootstrap support for F1S710 as seed ortholog is 100%.

Group of orthologs #4061. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.scrofa:19

F6SMS7              	100.00%		F1SVB0              	100.00%
Bootstrap support for F6SMS7 as seed ortholog is 100%.
Bootstrap support for F1SVB0 as seed ortholog is 77%.

Group of orthologs #4062. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.scrofa:158

H2XWV9              	100.00%		F1RKY7              	100.00%
Bootstrap support for H2XWV9 as seed ortholog is 100%.
Bootstrap support for F1RKY7 as seed ortholog is 100%.

Group of orthologs #4063. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 S.scrofa:49

F6S3Z4              	100.00%		I3LHL6              	100.00%
Bootstrap support for F6S3Z4 as seed ortholog is 67%.
Alternative seed ortholog is F6PUJ2 (18 bits away from this cluster)
Bootstrap support for I3LHL6 as seed ortholog is 91%.

Group of orthologs #4064. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.scrofa:158

F6TQR9              	100.00%		I3LGK0              	100.00%
Bootstrap support for F6TQR9 as seed ortholog is 100%.
Bootstrap support for I3LGK0 as seed ortholog is 100%.

Group of orthologs #4065. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.scrofa:158

H2XNI9              	100.00%		F1SLQ3              	100.00%
Bootstrap support for H2XNI9 as seed ortholog is 100%.
Bootstrap support for F1SLQ3 as seed ortholog is 100%.

Group of orthologs #4066. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.scrofa:158

F6VYB4              	100.00%		I3LMA6              	100.00%
Bootstrap support for F6VYB4 as seed ortholog is 100%.
Bootstrap support for I3LMA6 as seed ortholog is 100%.

Group of orthologs #4067. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.scrofa:158

H2XN72              	100.00%		I3LSZ3              	100.00%
Bootstrap support for H2XN72 as seed ortholog is 97%.
Bootstrap support for I3LSZ3 as seed ortholog is 100%.

Group of orthologs #4068. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 S.scrofa:116

H2Y0C3              	100.00%		I3LM25              	100.00%
Bootstrap support for H2Y0C3 as seed ortholog is 100%.
Bootstrap support for I3LM25 as seed ortholog is 100%.

Group of orthologs #4069. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.scrofa:15

F6RS38              	100.00%		E9LT09              	100.00%
                    	       		F1RVC7              	67.73%
                    	       		F1SEL5              	22.21%
Bootstrap support for F6RS38 as seed ortholog is 100%.
Bootstrap support for E9LT09 as seed ortholog is 93%.

Group of orthologs #4070. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.scrofa:157

H2XN19              	100.00%		F1RF32              	100.00%
Bootstrap support for H2XN19 as seed ortholog is 100%.
Bootstrap support for F1RF32 as seed ortholog is 100%.

Group of orthologs #4071. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.scrofa:157

F7BPA9              	100.00%		F1SBI0              	100.00%
Bootstrap support for F7BPA9 as seed ortholog is 100%.
Bootstrap support for F1SBI0 as seed ortholog is 100%.

Group of orthologs #4072. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 S.scrofa:19

F6SST4              	100.00%		P00172              	100.00%
Bootstrap support for F6SST4 as seed ortholog is 100%.
Bootstrap support for P00172 as seed ortholog is 80%.

Group of orthologs #4073. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 S.scrofa:61

H2XZH8              	100.00%		F1SED1              	100.00%
Bootstrap support for H2XZH8 as seed ortholog is 90%.
Bootstrap support for F1SED1 as seed ortholog is 95%.

Group of orthologs #4074. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:83

H2XJL5              	100.00%		I3L6X2              	100.00%
H2XQE2              	62.82%		F1SH10              	23.45%
H2XLT4              	57.57%		F1RF57              	7.72%
                    	       		F1RF59              	6.51%
Bootstrap support for H2XJL5 as seed ortholog is 97%.
Bootstrap support for I3L6X2 as seed ortholog is 94%.

Group of orthologs #4075. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:156

H2XUV5              	100.00%		F1RJN6              	100.00%
                    	       		Q29599              	100.00%
                    	       		F1RKA7              	33.86%
                    	       		F1RIV0              	10.93%
Bootstrap support for H2XUV5 as seed ortholog is 100%.
Bootstrap support for F1RJN6 as seed ortholog is 100%.
Bootstrap support for Q29599 as seed ortholog is 100%.

Group of orthologs #4076. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 S.scrofa:1

F6Q9M1              	100.00%		F1SUW2              	100.00%
                    	       		P08419              	46.55%
                    	       		P00772              	28.33%
Bootstrap support for F6Q9M1 as seed ortholog is 62%.
Alternative seed ortholog is H2Y099 (10 bits away from this cluster)
Bootstrap support for F1SUW2 as seed ortholog is 49%.
Alternative seed ortholog is F1SAM4 (1 bits away from this cluster)

Group of orthologs #4077. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:156

F6ZBU1              	100.00%		I3LI32              	100.00%
                    	       		I3LFM1              	58.12%
Bootstrap support for F6ZBU1 as seed ortholog is 100%.
Bootstrap support for I3LI32 as seed ortholog is 100%.

Group of orthologs #4078. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:156

H2XSM3              	100.00%		I3LA60              	100.00%
                    	       		F1S777              	7.55%
Bootstrap support for H2XSM3 as seed ortholog is 100%.
Bootstrap support for I3LA60 as seed ortholog is 100%.

Group of orthologs #4079. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.scrofa:156

F6SXS9              	100.00%		F1RMH6              	100.00%
Bootstrap support for F6SXS9 as seed ortholog is 95%.
Bootstrap support for F1RMH6 as seed ortholog is 100%.

Group of orthologs #4080. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:156

F6VQE7              	100.00%		B8Q0B2              	100.00%
Bootstrap support for F6VQE7 as seed ortholog is 100%.
Bootstrap support for B8Q0B2 as seed ortholog is 100%.

Group of orthologs #4081. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:156

F6PXX9              	100.00%		F1S8K7              	100.00%
Bootstrap support for F6PXX9 as seed ortholog is 100%.
Bootstrap support for F1S8K7 as seed ortholog is 100%.

Group of orthologs #4082. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:156

F6TV26              	100.00%		F1S6Q7              	100.00%
Bootstrap support for F6TV26 as seed ortholog is 100%.
Bootstrap support for F1S6Q7 as seed ortholog is 100%.

Group of orthologs #4083. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:156

F6PRN9              	100.00%		I3LLQ7              	100.00%
Bootstrap support for F6PRN9 as seed ortholog is 100%.
Bootstrap support for I3LLQ7 as seed ortholog is 100%.

Group of orthologs #4084. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:156

F6Z5N9              	100.00%		F1SNP2              	100.00%
Bootstrap support for F6Z5N9 as seed ortholog is 100%.
Bootstrap support for F1SNP2 as seed ortholog is 100%.

Group of orthologs #4085. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.scrofa:156

F6V4V8              	100.00%		I3LBR9              	100.00%
Bootstrap support for F6V4V8 as seed ortholog is 99%.
Bootstrap support for I3LBR9 as seed ortholog is 100%.

Group of orthologs #4086. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:156

F7B5G8              	100.00%		F1SIQ2              	100.00%
Bootstrap support for F7B5G8 as seed ortholog is 100%.
Bootstrap support for F1SIQ2 as seed ortholog is 100%.

Group of orthologs #4087. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:156

F6TMW1              	100.00%		I3LTD4              	100.00%
Bootstrap support for F6TMW1 as seed ortholog is 100%.
Bootstrap support for I3LTD4 as seed ortholog is 100%.

Group of orthologs #4088. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:156

F6X3L7              	100.00%		I3LIT6              	100.00%
Bootstrap support for F6X3L7 as seed ortholog is 100%.
Bootstrap support for I3LIT6 as seed ortholog is 100%.

Group of orthologs #4089. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:19

F6V1C0              	100.00%		I3LV38              	100.00%
Bootstrap support for F6V1C0 as seed ortholog is 100%.
Bootstrap support for I3LV38 as seed ortholog is 81%.

Group of orthologs #4090. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:156

F7B9H1              	100.00%		I3LBE3              	100.00%
Bootstrap support for F7B9H1 as seed ortholog is 100%.
Bootstrap support for I3LBE3 as seed ortholog is 100%.

Group of orthologs #4091. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:156

F7B2W7              	100.00%		I3LIX7              	100.00%
Bootstrap support for F7B2W7 as seed ortholog is 100%.
Bootstrap support for I3LIX7 as seed ortholog is 100%.

Group of orthologs #4092. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 S.scrofa:156

H2XXC3              	100.00%		I3LCQ6              	100.00%
Bootstrap support for H2XXC3 as seed ortholog is 100%.
Bootstrap support for I3LCQ6 as seed ortholog is 100%.

Group of orthologs #4093. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:75

H2Y060              	100.00%		F1RLC5              	100.00%
                    	       		P19130              	31.41%
                    	       		I3LP88              	18.73%
                    	       		F1SUK9              	17.00%
                    	       		F1RXU3              	13.83%
                    	       		F1RXT0              	12.39%
Bootstrap support for H2Y060 as seed ortholog is 99%.
Bootstrap support for F1RLC5 as seed ortholog is 99%.

Group of orthologs #4094. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.scrofa:91

F7BE41              	100.00%		F1SA39              	100.00%
                    	       		F1SJ07              	16.99%
Bootstrap support for F7BE41 as seed ortholog is 100%.
Bootstrap support for F1SA39 as seed ortholog is 98%.

Group of orthologs #4095. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.scrofa:155

F6ZW63              	100.00%		F1SHS9              	100.00%
                    	       		F1RWG8              	9.39%
Bootstrap support for F6ZW63 as seed ortholog is 99%.
Bootstrap support for F1SHS9 as seed ortholog is 100%.

Group of orthologs #4096. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.scrofa:155

H2XST1              	100.00%		F1RYQ5              	100.00%
                    	       		B1PXG0              	27.68%
Bootstrap support for H2XST1 as seed ortholog is 100%.
Bootstrap support for F1RYQ5 as seed ortholog is 100%.

Group of orthologs #4097. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.scrofa:155

F6XKH4              	100.00%		F1RHE6              	100.00%
Bootstrap support for F6XKH4 as seed ortholog is 100%.
Bootstrap support for F1RHE6 as seed ortholog is 100%.

Group of orthologs #4098. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.scrofa:155

F6QFA2              	100.00%		F1SS99              	100.00%
Bootstrap support for F6QFA2 as seed ortholog is 100%.
Bootstrap support for F1SS99 as seed ortholog is 100%.

Group of orthologs #4099. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.scrofa:155

F6YIG5              	100.00%		F1SJF5              	100.00%
Bootstrap support for F6YIG5 as seed ortholog is 99%.
Bootstrap support for F1SJF5 as seed ortholog is 100%.

Group of orthologs #4100. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.scrofa:155

H2Y306              	100.00%		F1RFT0              	100.00%
Bootstrap support for H2Y306 as seed ortholog is 100%.
Bootstrap support for F1RFT0 as seed ortholog is 100%.

Group of orthologs #4101. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.scrofa:155

H2XSI3              	100.00%		F1S3K4              	100.00%
Bootstrap support for H2XSI3 as seed ortholog is 100%.
Bootstrap support for F1S3K4 as seed ortholog is 100%.

Group of orthologs #4102. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.scrofa:55

F6TV99              	100.00%		I3LFT7              	100.00%
Bootstrap support for F6TV99 as seed ortholog is 100%.
Bootstrap support for I3LFT7 as seed ortholog is 98%.

Group of orthologs #4103. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 S.scrofa:58

H2XRK5              	100.00%		F1SQX0              	100.00%
Bootstrap support for H2XRK5 as seed ortholog is 83%.
Bootstrap support for F1SQX0 as seed ortholog is 98%.

Group of orthologs #4104. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.scrofa:155

H2XWG7              	100.00%		F1SV29              	100.00%
Bootstrap support for H2XWG7 as seed ortholog is 100%.
Bootstrap support for F1SV29 as seed ortholog is 100%.

Group of orthologs #4105. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.scrofa:155

H2Y139              	100.00%		F1SUQ0              	100.00%
Bootstrap support for H2Y139 as seed ortholog is 100%.
Bootstrap support for F1SUQ0 as seed ortholog is 100%.

Group of orthologs #4106. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 S.scrofa:155

H2Y0R9              	100.00%		K7GKK8              	100.00%
Bootstrap support for H2Y0R9 as seed ortholog is 100%.
Bootstrap support for K7GKK8 as seed ortholog is 100%.

Group of orthologs #4107. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.scrofa:154

H2XKK1              	100.00%		F1RP67              	100.00%
                    	       		F1RRA2              	31.93%
                    	       		F1RM39              	17.59%
                    	       		F1RZS2              	16.44%
Bootstrap support for H2XKK1 as seed ortholog is 100%.
Bootstrap support for F1RP67 as seed ortholog is 100%.

Group of orthologs #4108. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.scrofa:18

F6YII5              	100.00%		O97969              	100.00%
                    	       		O02835              	8.19%
                    	       		O97505              	7.53%
                    	       		O02836              	6.08%
Bootstrap support for F6YII5 as seed ortholog is 91%.
Bootstrap support for O97969 as seed ortholog is 84%.

Group of orthologs #4109. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 S.scrofa:154

F6QIE7              	100.00%		F1SBA1              	100.00%
                    	       		I3LG71              	23.09%
                    	       		F1SG44              	9.08%
Bootstrap support for F6QIE7 as seed ortholog is 69%.
Alternative seed ortholog is F6QH11 (18 bits away from this cluster)
Bootstrap support for F1SBA1 as seed ortholog is 100%.

Group of orthologs #4110. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:14

F6TMF8              	100.00%		I3L9P0              	100.00%
                    	       		I3L5U7              	15.23%
                    	       		F1RXA0              	6.20%
Bootstrap support for F6TMF8 as seed ortholog is 95%.
Bootstrap support for I3L9P0 as seed ortholog is 71%.
Alternative seed ortholog is I3L6W1 (14 bits away from this cluster)

Group of orthologs #4111. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.scrofa:154

F6WKI5              	100.00%		B3SP85              	100.00%
F6WA11              	18.16%		
Bootstrap support for F6WKI5 as seed ortholog is 100%.
Bootstrap support for B3SP85 as seed ortholog is 100%.

Group of orthologs #4112. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.scrofa:154

F6PRU7              	100.00%		F1S367              	100.00%
H2Y0G4              	36.08%		
Bootstrap support for F6PRU7 as seed ortholog is 100%.
Bootstrap support for F1S367 as seed ortholog is 100%.

Group of orthologs #4113. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.scrofa:154

F6RMZ6              	100.00%		F1SP28              	100.00%
                    	       		F1SP26              	14.41%
Bootstrap support for F6RMZ6 as seed ortholog is 100%.
Bootstrap support for F1SP28 as seed ortholog is 100%.

Group of orthologs #4114. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.scrofa:154

F6UXC1              	100.00%		F1SRJ1              	100.00%
                    	       		F1S2C7              	22.25%
Bootstrap support for F6UXC1 as seed ortholog is 100%.
Bootstrap support for F1SRJ1 as seed ortholog is 100%.

Group of orthologs #4115. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 S.scrofa:154

F6SRF9              	100.00%		F1RQ02              	100.00%
Bootstrap support for F6SRF9 as seed ortholog is 85%.
Bootstrap support for F1RQ02 as seed ortholog is 100%.

Group of orthologs #4116. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.scrofa:154

F6RM26              	100.00%		F1SLX0              	100.00%
Bootstrap support for F6RM26 as seed ortholog is 100%.
Bootstrap support for F1SLX0 as seed ortholog is 100%.

Group of orthologs #4117. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.scrofa:154

F6R2C6              	100.00%		F2Z5G8              	100.00%
Bootstrap support for F6R2C6 as seed ortholog is 100%.
Bootstrap support for F2Z5G8 as seed ortholog is 100%.

Group of orthologs #4118. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 S.scrofa:154

F6QCP0              	100.00%		I3LAQ6              	100.00%
Bootstrap support for F6QCP0 as seed ortholog is 70%.
Alternative seed ortholog is H2XZ52 (14 bits away from this cluster)
Bootstrap support for I3LAQ6 as seed ortholog is 100%.

Group of orthologs #4119. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.scrofa:154

F7AP11              	100.00%		F1S960              	100.00%
Bootstrap support for F7AP11 as seed ortholog is 100%.
Bootstrap support for F1S960 as seed ortholog is 100%.

Group of orthologs #4120. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.scrofa:154

H2Y1A1              	100.00%		F1RHL8              	100.00%
Bootstrap support for H2Y1A1 as seed ortholog is 100%.
Bootstrap support for F1RHL8 as seed ortholog is 100%.

Group of orthologs #4121. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.scrofa:154

F7B7K2              	100.00%		F2Z5K6              	100.00%
Bootstrap support for F7B7K2 as seed ortholog is 100%.
Bootstrap support for F2Z5K6 as seed ortholog is 100%.

Group of orthologs #4122. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 S.scrofa:154

F7AZH2              	100.00%		I3LIF5              	100.00%
Bootstrap support for F7AZH2 as seed ortholog is 100%.
Bootstrap support for I3LIF5 as seed ortholog is 100%.

Group of orthologs #4123. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.scrofa:58

F6RQ77              	100.00%		F1RY05              	100.00%
H2XVQ5              	51.25%		F1SBU3              	17.43%
F6WMW7              	12.72%		
F6Q7J8              	12.37%		
F6TC09              	11.47%		
H2XZA1              	10.22%		
H2XY63              	10.04%		
H2XN59              	9.86%		
F6T2T0              	9.14%		
F6UDE2              	8.96%		
F6UH52              	8.96%		
F6ZT75              	8.96%		
F6W505              	8.96%		
H2XM68              	8.60%		
F6U9D6              	8.24%		
H2Y248              	8.24%		
F6XQY6              	8.06%		
F7A8W7              	7.71%		
H2Y0V5              	7.71%		
F7BB18              	7.17%		
F6SB61              	6.81%		
F6Q1R5              	6.63%		
F6T435              	6.63%		
F6QWY0              	6.45%		
H2XVV6              	6.27%		
H2XV74              	5.91%		
F6QWZ9              	5.56%		
H2XRW3              	5.56%		
F6XEI7              	5.38%		
F6W5Z3              	5.20%		
Q6A1F0              	5.02%		
Bootstrap support for F6RQ77 as seed ortholog is 90%.
Bootstrap support for F1RY05 as seed ortholog is 92%.

Group of orthologs #4124. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.scrofa:153

H2XW37              	100.00%		F1RVV2              	100.00%
                    	       		F1RVV5              	27.00%
                    	       		F1S5G2              	18.60%
Bootstrap support for H2XW37 as seed ortholog is 100%.
Bootstrap support for F1RVV2 as seed ortholog is 100%.

Group of orthologs #4125. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.scrofa:153

F6QW82              	100.00%		F1RKF6              	100.00%
Bootstrap support for F6QW82 as seed ortholog is 100%.
Bootstrap support for F1RKF6 as seed ortholog is 100%.

Group of orthologs #4126. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.scrofa:56

F6QXN6              	100.00%		F1SI86              	100.00%
Bootstrap support for F6QXN6 as seed ortholog is 99%.
Bootstrap support for F1SI86 as seed ortholog is 99%.

Group of orthologs #4127. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.scrofa:153

H2XJG0              	100.00%		F1RGL8              	100.00%
Bootstrap support for H2XJG0 as seed ortholog is 100%.
Bootstrap support for F1RGL8 as seed ortholog is 100%.

Group of orthologs #4128. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.scrofa:153

Q1JV40              	100.00%		F1RNL6              	100.00%
Bootstrap support for Q1JV40 as seed ortholog is 100%.
Bootstrap support for F1RNL6 as seed ortholog is 100%.

Group of orthologs #4129. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.scrofa:153

F6SFT9              	100.00%		I3LQQ3              	100.00%
Bootstrap support for F6SFT9 as seed ortholog is 100%.
Bootstrap support for I3LQQ3 as seed ortholog is 100%.

Group of orthologs #4130. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 S.scrofa:153

Q1RLC9              	100.00%		F1RZ16              	100.00%
Bootstrap support for Q1RLC9 as seed ortholog is 100%.
Bootstrap support for F1RZ16 as seed ortholog is 100%.

Group of orthologs #4131. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.scrofa:152

F6UCI3              	100.00%		F1SCF4              	100.00%
                    	       		F1SCE1              	41.65%
                    	       		F1SD42              	28.22%
Bootstrap support for F6UCI3 as seed ortholog is 100%.
Bootstrap support for F1SCF4 as seed ortholog is 100%.

Group of orthologs #4132. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.scrofa:152

F6Y8H0              	100.00%		F1RRM1              	100.00%
Bootstrap support for F6Y8H0 as seed ortholog is 100%.
Bootstrap support for F1RRM1 as seed ortholog is 100%.

Group of orthologs #4133. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.scrofa:152

F6TIK7              	100.00%		F1SMG6              	100.00%
Bootstrap support for F6TIK7 as seed ortholog is 100%.
Bootstrap support for F1SMG6 as seed ortholog is 100%.

Group of orthologs #4134. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.scrofa:152

F6X5P6              	100.00%		F1SGC7              	100.00%
Bootstrap support for F6X5P6 as seed ortholog is 100%.
Bootstrap support for F1SGC7 as seed ortholog is 100%.

Group of orthologs #4135. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.scrofa:152

H2XZ96              	100.00%		F1RFD1              	100.00%
Bootstrap support for H2XZ96 as seed ortholog is 100%.
Bootstrap support for F1RFD1 as seed ortholog is 100%.

Group of orthologs #4136. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.scrofa:152

F6ZK41              	100.00%		F1SFE2              	100.00%
Bootstrap support for F6ZK41 as seed ortholog is 100%.
Bootstrap support for F1SFE2 as seed ortholog is 100%.

Group of orthologs #4137. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.scrofa:152

H2XL05              	100.00%		F2Z5P9              	100.00%
Bootstrap support for H2XL05 as seed ortholog is 100%.
Bootstrap support for F2Z5P9 as seed ortholog is 100%.

Group of orthologs #4138. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 S.scrofa:152

L7N0S4              	100.00%		I3LB48              	100.00%
Bootstrap support for L7N0S4 as seed ortholog is 100%.
Bootstrap support for I3LB48 as seed ortholog is 100%.

Group of orthologs #4139. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 S.scrofa:89

F6V2S0              	16.15%		F1RJ93              	100.00%
H2XQR2              	100.00%		F1SJS8              	100.00%
F6SZN1              	11.15%		I3LP06              	20.43%
Bootstrap support for H2XQR2 as seed ortholog is 70%.
Alternative seed ortholog is F7A7T2 (17 bits away from this cluster)
Bootstrap support for F1RJ93 as seed ortholog is 99%.
Bootstrap support for F1SJS8 as seed ortholog is 99%.

Group of orthologs #4140. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:151

F6RRB1              	100.00%		F1SJM7              	100.00%
                    	       		F1RP47              	61.49%
                    	       		K7GQC3              	36.53%
Bootstrap support for F6RRB1 as seed ortholog is 100%.
Bootstrap support for F1SJM7 as seed ortholog is 100%.

Group of orthologs #4141. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:151

H2XU03              	100.00%		F1SH78              	100.00%
                    	       		F1RZQ8              	6.64%
Bootstrap support for H2XU03 as seed ortholog is 100%.
Bootstrap support for F1SH78 as seed ortholog is 100%.

Group of orthologs #4142. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:151

F6PUL1              	100.00%		F1S743              	100.00%
Bootstrap support for F6PUL1 as seed ortholog is 100%.
Bootstrap support for F1S743 as seed ortholog is 100%.

Group of orthologs #4143. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:151

F6X3B3              	100.00%		F1RK11              	100.00%
Bootstrap support for F6X3B3 as seed ortholog is 100%.
Bootstrap support for F1RK11 as seed ortholog is 100%.

Group of orthologs #4144. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:151

F6Z8R5              	100.00%		F1RV66              	100.00%
Bootstrap support for F6Z8R5 as seed ortholog is 100%.
Bootstrap support for F1RV66 as seed ortholog is 100%.

Group of orthologs #4145. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.scrofa:151

F6RM35              	100.00%		F1SLM7              	100.00%
Bootstrap support for F6RM35 as seed ortholog is 99%.
Bootstrap support for F1SLM7 as seed ortholog is 100%.

Group of orthologs #4146. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:151

H2XZ57              	100.00%		F1RKX0              	100.00%
Bootstrap support for H2XZ57 as seed ortholog is 100%.
Bootstrap support for F1RKX0 as seed ortholog is 100%.

Group of orthologs #4147. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:151

F6TYR7              	100.00%		I3LAZ5              	100.00%
Bootstrap support for F6TYR7 as seed ortholog is 100%.
Bootstrap support for I3LAZ5 as seed ortholog is 100%.

Group of orthologs #4148. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:151

H2XQ56              	100.00%		F1S4Y6              	100.00%
Bootstrap support for H2XQ56 as seed ortholog is 100%.
Bootstrap support for F1S4Y6 as seed ortholog is 100%.

Group of orthologs #4149. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.scrofa:25

H2XJX9              	100.00%		F1SHI4              	100.00%
Bootstrap support for H2XJX9 as seed ortholog is 97%.
Bootstrap support for F1SHI4 as seed ortholog is 82%.

Group of orthologs #4150. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:69

F7AZ78              	100.00%		F1SLQ2              	100.00%
Bootstrap support for F7AZ78 as seed ortholog is 99%.
Bootstrap support for F1SLQ2 as seed ortholog is 99%.

Group of orthologs #4151. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:151

H2XQY4              	100.00%		F1SLH6              	100.00%
Bootstrap support for H2XQY4 as seed ortholog is 100%.
Bootstrap support for F1SLH6 as seed ortholog is 100%.

Group of orthologs #4152. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:151

F6ZUZ2              	100.00%		I3LBV6              	100.00%
Bootstrap support for F6ZUZ2 as seed ortholog is 100%.
Bootstrap support for I3LBV6 as seed ortholog is 100%.

Group of orthologs #4153. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:76

H2XSA5              	100.00%		F2Z5C5              	100.00%
Bootstrap support for H2XSA5 as seed ortholog is 100%.
Bootstrap support for F2Z5C5 as seed ortholog is 100%.

Group of orthologs #4154. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:151

F7APG8              	100.00%		I3LNJ0              	100.00%
Bootstrap support for F7APG8 as seed ortholog is 100%.
Bootstrap support for I3LNJ0 as seed ortholog is 100%.

Group of orthologs #4155. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 S.scrofa:151

H2XJU2              	100.00%		I3LR60              	100.00%
Bootstrap support for H2XJU2 as seed ortholog is 100%.
Bootstrap support for I3LR60 as seed ortholog is 100%.

Group of orthologs #4156. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.scrofa:150

F7BJL5              	100.00%		F1RJ33              	100.00%
                    	       		Q29058              	7.77%
                    	       		F1RGZ0              	5.57%
Bootstrap support for F7BJL5 as seed ortholog is 100%.
Bootstrap support for F1RJ33 as seed ortholog is 100%.

Group of orthologs #4157. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.scrofa:150

F6ZPP9              	100.00%		F1RGT5              	100.00%
                    	       		F1RJ59              	39.49%
Bootstrap support for F6ZPP9 as seed ortholog is 100%.
Bootstrap support for F1RGT5 as seed ortholog is 100%.

Group of orthologs #4158. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 S.scrofa:150

F6Y516              	100.00%		Q08092              	100.00%
                    	       		Q08094              	46.34%
Bootstrap support for F6Y516 as seed ortholog is 64%.
Alternative seed ortholog is F7A7T2 (10 bits away from this cluster)
Bootstrap support for Q08092 as seed ortholog is 100%.

Group of orthologs #4159. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 S.scrofa:61

F6YRU0              	100.00%		Q6RVA9              	100.00%
                    	       		Q3ZDQ5              	31.22%
Bootstrap support for F6YRU0 as seed ortholog is 91%.
Bootstrap support for Q6RVA9 as seed ortholog is 99%.

Group of orthologs #4160. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.scrofa:150

F6VLR9              	100.00%		F1RK00              	100.00%
Bootstrap support for F6VLR9 as seed ortholog is 100%.
Bootstrap support for F1RK00 as seed ortholog is 100%.

Group of orthologs #4161. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.scrofa:150

F6PI67              	100.00%		F1SB65              	100.00%
Bootstrap support for F6PI67 as seed ortholog is 100%.
Bootstrap support for F1SB65 as seed ortholog is 100%.

Group of orthologs #4162. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.scrofa:150

F7AVQ6              	100.00%		F1SNW0              	100.00%
Bootstrap support for F7AVQ6 as seed ortholog is 100%.
Bootstrap support for F1SNW0 as seed ortholog is 100%.

Group of orthologs #4163. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.scrofa:150

F7ATQ3              	100.00%		I3L7R7              	100.00%
Bootstrap support for F7ATQ3 as seed ortholog is 100%.
Bootstrap support for I3L7R7 as seed ortholog is 100%.

Group of orthologs #4164. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.scrofa:150

F7B6K5              	100.00%		I3LMV1              	100.00%
Bootstrap support for F7B6K5 as seed ortholog is 100%.
Bootstrap support for I3LMV1 as seed ortholog is 100%.

Group of orthologs #4165. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 S.scrofa:150

H2XZF3              	100.00%		I3LSG3              	100.00%
Bootstrap support for H2XZF3 as seed ortholog is 100%.
Bootstrap support for I3LSG3 as seed ortholog is 100%.

Group of orthologs #4166. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:149

F6ZAA5              	100.00%		I3LC84              	100.00%
F6ZNT5              	35.31%		I3L648              	51.17%
F6ZNS9              	30.93%		I3LLX8              	15.23%
F6Y7J1              	28.61%		Q3S3F7              	12.50%
F6XHN7              	25.77%		I3L7J3              	6.05%
F6XHS1              	21.65%		F1SJU2              	6.05%
F6SAU0              	20.88%		
F6QP54              	20.10%		
F6ZYZ9              	14.18%		
F6SQW0              	12.89%		
H2XPA6              	10.82%		
H2Y2F5              	6.19%		
Bootstrap support for F6ZAA5 as seed ortholog is 100%.
Bootstrap support for I3LC84 as seed ortholog is 100%.

Group of orthologs #4167. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:57

H2XVK3              	100.00%		F1RW46              	100.00%
                    	       		I3LL89              	18.18%
                    	       		F1SB33              	14.43%
                    	       		F1S5Z8              	14.43%
Bootstrap support for H2XVK3 as seed ortholog is 100%.
Bootstrap support for F1RW46 as seed ortholog is 96%.

Group of orthologs #4168. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:50

F7APY2              	100.00%		P49171              	100.00%
                    	       		F1SPH5              	97.80%
                    	       		F1RFS4              	12.09%
                    	       		I3L8W3              	7.69%
Bootstrap support for F7APY2 as seed ortholog is 100%.
Bootstrap support for P49171 as seed ortholog is 99%.

Group of orthologs #4169. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 S.scrofa:18

F8WQ81              	100.00%		F1SGE0              	100.00%
                    	       		I3LQG1              	7.42%
                    	       		I3LC58              	6.22%
Bootstrap support for F8WQ81 as seed ortholog is 65%.
Alternative seed ortholog is F6QK47 (15 bits away from this cluster)
Bootstrap support for F1SGE0 as seed ortholog is 69%.
Alternative seed ortholog is F1SDS9 (18 bits away from this cluster)

Group of orthologs #4170. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:82

F7B5E7              	100.00%		F1RVK0              	100.00%
                    	       		F1SJF3              	20.75%
Bootstrap support for F7B5E7 as seed ortholog is 99%.
Bootstrap support for F1RVK0 as seed ortholog is 99%.

Group of orthologs #4171. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:149

F6TB84              	100.00%		F1SUZ4              	100.00%
                    	       		I3LQK9              	24.82%
Bootstrap support for F6TB84 as seed ortholog is 100%.
Bootstrap support for F1SUZ4 as seed ortholog is 100%.

Group of orthologs #4172. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:149

F7BNZ0              	100.00%		F1SFM0              	100.00%
                    	       		F1SFM5              	51.07%
Bootstrap support for F7BNZ0 as seed ortholog is 100%.
Bootstrap support for F1SFM0 as seed ortholog is 100%.

Group of orthologs #4173. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:149

H2XKS6              	100.00%		F2Z5B9              	100.00%
                    	       		Q29223              	69.88%
Bootstrap support for H2XKS6 as seed ortholog is 100%.
Bootstrap support for F2Z5B9 as seed ortholog is 100%.

Group of orthologs #4174. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:76

F6W881              	100.00%		Q7PCJ9              	100.00%
                    	       		Q28999              	10.50%
Bootstrap support for F6W881 as seed ortholog is 100%.
Bootstrap support for Q7PCJ9 as seed ortholog is 99%.

Group of orthologs #4175. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.scrofa:56

F6TIG3              	100.00%		F1REZ0              	100.00%
Bootstrap support for F6TIG3 as seed ortholog is 99%.
Bootstrap support for F1REZ0 as seed ortholog is 98%.

Group of orthologs #4176. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:149

F6QGW5              	100.00%		I3L5H4              	100.00%
Bootstrap support for F6QGW5 as seed ortholog is 100%.
Bootstrap support for I3L5H4 as seed ortholog is 100%.

Group of orthologs #4177. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:149

F6Y504              	100.00%		F1S8F8              	100.00%
Bootstrap support for F6Y504 as seed ortholog is 100%.
Bootstrap support for F1S8F8 as seed ortholog is 100%.

Group of orthologs #4178. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:149

F7A9H5              	100.00%		F1S2I8              	100.00%
Bootstrap support for F7A9H5 as seed ortholog is 100%.
Bootstrap support for F1S2I8 as seed ortholog is 100%.

Group of orthologs #4179. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:149

F6YSJ8              	100.00%		I3LFS2              	100.00%
Bootstrap support for F6YSJ8 as seed ortholog is 100%.
Bootstrap support for I3LFS2 as seed ortholog is 100%.

Group of orthologs #4180. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.scrofa:36

H2Y0M9              	100.00%		F1SG90              	100.00%
Bootstrap support for H2Y0M9 as seed ortholog is 100%.
Bootstrap support for F1SG90 as seed ortholog is 99%.

Group of orthologs #4181. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:30

F6X777              	100.00%		I3LVT2              	100.00%
Bootstrap support for F6X777 as seed ortholog is 100%.
Bootstrap support for I3LVT2 as seed ortholog is 87%.

Group of orthologs #4182. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:149

H2XYE3              	100.00%		I3LBZ0              	100.00%
Bootstrap support for H2XYE3 as seed ortholog is 100%.
Bootstrap support for I3LBZ0 as seed ortholog is 100%.

Group of orthologs #4183. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 S.scrofa:149

H2XXQ7              	100.00%		I3LLU9              	100.00%
Bootstrap support for H2XXQ7 as seed ortholog is 100%.
Bootstrap support for I3LLU9 as seed ortholog is 100%.

Group of orthologs #4184. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 S.scrofa:29

H2XJV5              	100.00%		C3VMW5              	100.00%
F6PX91              	14.38%		I3LHE9              	37.09%
                    	       		C3VPJ4              	31.46%
                    	       		C3VML0              	16.56%
                    	       		C3VML2              	13.25%
                    	       		C3VML1              	11.92%
                    	       		C3VMK2              	11.59%
Bootstrap support for H2XJV5 as seed ortholog is 71%.
Alternative seed ortholog is F6PQC6 (17 bits away from this cluster)
Bootstrap support for C3VMW5 as seed ortholog is 85%.

Group of orthologs #4185. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.scrofa:61

F6Z1X8              	100.00%		P10612              	100.00%
F7BHU7              	100.00%		A5GFV8              	100.00%
F6Z1X1              	46.75%		Q29552              	21.74%
                    	       		I3LAB7              	11.23%
                    	       		I3LFH6              	7.34%
Bootstrap support for F6Z1X8 as seed ortholog is 88%.
Bootstrap support for F7BHU7 as seed ortholog is 65%.
Alternative seed ortholog is F6RS86 (54 bits away from this cluster)
Bootstrap support for P10612 as seed ortholog is 93%.
Bootstrap support for A5GFV8 as seed ortholog is 90%.

Group of orthologs #4186. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.scrofa:75

F6ZKF6              	100.00%		F1S981              	100.00%
F6X638              	32.77%		
F6X612              	24.54%		
F6VLY9              	20.84%		
H2XZ13              	13.78%		
F7BFN9              	9.58%		
Bootstrap support for F6ZKF6 as seed ortholog is 91%.
Bootstrap support for F1S981 as seed ortholog is 95%.

Group of orthologs #4187. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.scrofa:148

L7N0U7              	100.00%		I3L9A0              	100.00%
F6X245              	80.86%		I3LFY6              	43.56%
H2Y252              	7.42%		I3LRP8              	17.33%
Bootstrap support for L7N0U7 as seed ortholog is 100%.
Bootstrap support for I3L9A0 as seed ortholog is 100%.

Group of orthologs #4188. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 S.scrofa:69

F6RDW1              	100.00%		F1RWW2              	100.00%
F6VQ32              	8.85%		
F6T5Q1              	7.69%		
Bootstrap support for F6RDW1 as seed ortholog is 91%.
Bootstrap support for F1RWW2 as seed ortholog is 99%.

Group of orthologs #4189. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.scrofa:73

Q4H2J7              	100.00%		F1SFQ9              	100.00%
                    	       		I3LMT4              	17.75%
                    	       		F1RWH8              	11.88%
Bootstrap support for Q4H2J7 as seed ortholog is 100%.
Bootstrap support for F1SFQ9 as seed ortholog is 99%.

Group of orthologs #4190. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.scrofa:148

F6VB34              	100.00%		F1SKN7              	100.00%
                    	       		I3LCD7              	63.07%
Bootstrap support for F6VB34 as seed ortholog is 100%.
Bootstrap support for F1SKN7 as seed ortholog is 100%.

Group of orthologs #4191. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.scrofa:10

F7A7X6              	100.00%		F1SL42              	100.00%
                    	       		F1SSX4              	30.00%
Bootstrap support for F7A7X6 as seed ortholog is 100%.
Bootstrap support for F1SL42 as seed ortholog is 96%.

Group of orthologs #4192. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 S.scrofa:148

F7B963              	100.00%		I3LAH9              	100.00%
F6PI53              	59.40%		
Bootstrap support for F7B963 as seed ortholog is 50%.
Alternative seed ortholog is H2XPZ0 (1 bits away from this cluster)
Bootstrap support for I3LAH9 as seed ortholog is 100%.

Group of orthologs #4193. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.scrofa:148

H2Y1C3              	100.00%		F1SLZ8              	100.00%
                    	       		F1SN32              	25.25%
Bootstrap support for H2Y1C3 as seed ortholog is 100%.
Bootstrap support for F1SLZ8 as seed ortholog is 100%.

Group of orthologs #4194. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.scrofa:148

F6PRB6              	100.00%		F1SNS5              	100.00%
Bootstrap support for F6PRB6 as seed ortholog is 100%.
Bootstrap support for F1SNS5 as seed ortholog is 100%.

Group of orthologs #4195. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.scrofa:148

F6ZJ92              	100.00%		F1RVX1              	100.00%
Bootstrap support for F6ZJ92 as seed ortholog is 100%.
Bootstrap support for F1RVX1 as seed ortholog is 100%.

Group of orthologs #4196. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.scrofa:148

H2XXS3              	100.00%		F1RFJ0              	100.00%
Bootstrap support for H2XXS3 as seed ortholog is 100%.
Bootstrap support for F1RFJ0 as seed ortholog is 100%.

Group of orthologs #4197. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.scrofa:148

F6W8Z2              	100.00%		I3LF90              	100.00%
Bootstrap support for F6W8Z2 as seed ortholog is 100%.
Bootstrap support for I3LF90 as seed ortholog is 100%.

Group of orthologs #4198. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.scrofa:148

H2XY86              	100.00%		F1S8G7              	100.00%
Bootstrap support for H2XY86 as seed ortholog is 100%.
Bootstrap support for F1S8G7 as seed ortholog is 100%.

Group of orthologs #4199. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.scrofa:148

F6VGW8              	100.00%		K7GK90              	100.00%
Bootstrap support for F6VGW8 as seed ortholog is 100%.
Bootstrap support for K7GK90 as seed ortholog is 100%.

Group of orthologs #4200. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 S.scrofa:148

H2XT20              	100.00%		F1ST82              	100.00%
Bootstrap support for H2XT20 as seed ortholog is 100%.
Bootstrap support for F1ST82 as seed ortholog is 100%.

Group of orthologs #4201. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:68

F6YJR3              	100.00%		I3L684              	100.00%
                    	       		F1RL72              	98.33%
                    	       		F1RSU9              	16.23%
                    	       		I3L5H5              	8.59%
Bootstrap support for F6YJR3 as seed ortholog is 100%.
Bootstrap support for I3L684 as seed ortholog is 99%.

Group of orthologs #4202. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:52

F6S4A5              	100.00%		I3LNR2              	100.00%
                    	       		F1S672              	8.70%
Bootstrap support for F6S4A5 as seed ortholog is 100%.
Bootstrap support for I3LNR2 as seed ortholog is 95%.

Group of orthologs #4203. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:147

F6YRU6              	100.00%		I3L8N0              	100.00%
                    	       		F1SQU1              	7.32%
Bootstrap support for F6YRU6 as seed ortholog is 96%.
Bootstrap support for I3L8N0 as seed ortholog is 100%.

Group of orthologs #4204. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:147

H2XVR3              	100.00%		F1SDE2              	100.00%
                    	       		F1SK16              	11.41%
Bootstrap support for H2XVR3 as seed ortholog is 100%.
Bootstrap support for F1SDE2 as seed ortholog is 100%.

Group of orthologs #4205. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:147

Q4H3N8              	100.00%		I3LMR9              	100.00%
                    	       		I3LMK0              	90.38%
Bootstrap support for Q4H3N8 as seed ortholog is 100%.
Bootstrap support for I3LMR9 as seed ortholog is 100%.

Group of orthologs #4206. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:147

F6R4A6              	100.00%		F1RHS6              	100.00%
Bootstrap support for F6R4A6 as seed ortholog is 100%.
Bootstrap support for F1RHS6 as seed ortholog is 100%.

Group of orthologs #4207. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:105

F6TJ31              	100.00%		F1RY61              	100.00%
Bootstrap support for F6TJ31 as seed ortholog is 100%.
Bootstrap support for F1RY61 as seed ortholog is 99%.

Group of orthologs #4208. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:147

F6XUE2              	100.00%		F1RW74              	100.00%
Bootstrap support for F6XUE2 as seed ortholog is 100%.
Bootstrap support for F1RW74 as seed ortholog is 100%.

Group of orthologs #4209. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:147

H2XKX9              	100.00%		F1RFS5              	100.00%
Bootstrap support for H2XKX9 as seed ortholog is 100%.
Bootstrap support for F1RFS5 as seed ortholog is 100%.

Group of orthologs #4210. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:147

F6YGC9              	100.00%		F1SMS9              	100.00%
Bootstrap support for F6YGC9 as seed ortholog is 100%.
Bootstrap support for F1SMS9 as seed ortholog is 100%.

Group of orthologs #4211. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:147

F6W1S6              	100.00%		I3L5I1              	100.00%
Bootstrap support for F6W1S6 as seed ortholog is 100%.
Bootstrap support for I3L5I1 as seed ortholog is 100%.

Group of orthologs #4212. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 S.scrofa:147

F6WT81              	100.00%		I3LKU2              	100.00%
Bootstrap support for F6WT81 as seed ortholog is 100%.
Bootstrap support for I3LKU2 as seed ortholog is 100%.

Group of orthologs #4213. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:146

F6X728              	100.00%		F1RZJ0              	100.00%
                    	       		F1S4Q4              	14.22%
                    	       		I3LFK8              	7.11%
Bootstrap support for F6X728 as seed ortholog is 100%.
Bootstrap support for F1RZJ0 as seed ortholog is 100%.

Group of orthologs #4214. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:146

F6W2W8              	100.00%		F1SGX5              	100.00%
                    	       		I3LG88              	57.54%
                    	       		I3LFR4              	33.54%
Bootstrap support for F6W2W8 as seed ortholog is 100%.
Bootstrap support for F1SGX5 as seed ortholog is 100%.

Group of orthologs #4215. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:146

F7BL63              	100.00%		F1SN43              	100.00%
                    	       		F1S7M3              	24.67%
                    	       		F1RGM4              	19.61%
Bootstrap support for F7BL63 as seed ortholog is 100%.
Bootstrap support for F1SN43 as seed ortholog is 100%.

Group of orthologs #4216. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:54

H2XTC9              	100.00%		P61958              	100.00%
                    	       		A7WLI0              	74.00%
                    	       		I3LLG3              	68.00%
Bootstrap support for H2XTC9 as seed ortholog is 100%.
Bootstrap support for P61958 as seed ortholog is 99%.

Group of orthologs #4217. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:146

F6SVW0              	100.00%		F1RT92              	100.00%
                    	       		I3L9M7              	85.14%
Bootstrap support for F6SVW0 as seed ortholog is 100%.
Bootstrap support for F1RT92 as seed ortholog is 100%.

Group of orthologs #4218. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:146

F6US70              	100.00%		F1RVS9              	100.00%
Bootstrap support for F6US70 as seed ortholog is 100%.
Bootstrap support for F1RVS9 as seed ortholog is 100%.

Group of orthologs #4219. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:146

H2XKL0              	100.00%		F1RFX1              	100.00%
Bootstrap support for H2XKL0 as seed ortholog is 100%.
Bootstrap support for F1RFX1 as seed ortholog is 100%.

Group of orthologs #4220. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 S.scrofa:96

F6QRU4              	100.00%		F1SLF0              	100.00%
Bootstrap support for F6QRU4 as seed ortholog is 70%.
Alternative seed ortholog is F6WU12 (13 bits away from this cluster)
Bootstrap support for F1SLF0 as seed ortholog is 99%.

Group of orthologs #4221. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:146

F6X832              	100.00%		F1SKM5              	100.00%
Bootstrap support for F6X832 as seed ortholog is 100%.
Bootstrap support for F1SKM5 as seed ortholog is 100%.

Group of orthologs #4222. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:146

F6S3H3              	100.00%		I3LMP2              	100.00%
Bootstrap support for F6S3H3 as seed ortholog is 100%.
Bootstrap support for I3LMP2 as seed ortholog is 100%.

Group of orthologs #4223. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:146

H2XXI7              	100.00%		F1SFR2              	100.00%
Bootstrap support for H2XXI7 as seed ortholog is 100%.
Bootstrap support for F1SFR2 as seed ortholog is 100%.

Group of orthologs #4224. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:146

F6WNH2              	100.00%		I3LPL4              	100.00%
Bootstrap support for F6WNH2 as seed ortholog is 100%.
Bootstrap support for I3LPL4 as seed ortholog is 100%.

Group of orthologs #4225. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:146

F6YLX3              	100.00%		I3LN78              	100.00%
Bootstrap support for F6YLX3 as seed ortholog is 100%.
Bootstrap support for I3LN78 as seed ortholog is 100%.

Group of orthologs #4226. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:146

F6UJ88              	100.00%		Q6Q7K0              	100.00%
Bootstrap support for F6UJ88 as seed ortholog is 100%.
Bootstrap support for Q6Q7K0 as seed ortholog is 100%.

Group of orthologs #4227. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:146

F6ZCL3              	100.00%		I3LM57              	100.00%
Bootstrap support for F6ZCL3 as seed ortholog is 100%.
Bootstrap support for I3LM57 as seed ortholog is 100%.

Group of orthologs #4228. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:104

F7AMQ2              	100.00%		I3LKC2              	100.00%
Bootstrap support for F7AMQ2 as seed ortholog is 100%.
Bootstrap support for I3LKC2 as seed ortholog is 99%.

Group of orthologs #4229. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 S.scrofa:146

H2Y0T0              	100.00%		I3LV68              	100.00%
Bootstrap support for H2Y0T0 as seed ortholog is 100%.
Bootstrap support for I3LV68 as seed ortholog is 100%.

Group of orthologs #4230. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.scrofa:145

F6Y3G3              	100.00%		Q95L12              	100.00%
                    	       		F1SET9              	55.24%
                    	       		I3LR27              	50.70%
Bootstrap support for F6Y3G3 as seed ortholog is 100%.
Bootstrap support for Q95L12 as seed ortholog is 100%.

Group of orthologs #4231. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.scrofa:145

F6TVK0              	100.00%		F1SNB3              	100.00%
                    	       		F1SBU0              	9.80%
Bootstrap support for F6TVK0 as seed ortholog is 100%.
Bootstrap support for F1SNB3 as seed ortholog is 100%.

Group of orthologs #4232. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.scrofa:145

F6ZGE9              	100.00%		F1S192              	100.00%
Bootstrap support for F6ZGE9 as seed ortholog is 100%.
Bootstrap support for F1S192 as seed ortholog is 100%.

Group of orthologs #4233. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.scrofa:145

F6S809              	100.00%		F1SR64              	100.00%
Bootstrap support for F6S809 as seed ortholog is 100%.
Bootstrap support for F1SR64 as seed ortholog is 100%.

Group of orthologs #4234. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.scrofa:145

F6VZ12              	100.00%		I3L650              	100.00%
Bootstrap support for F6VZ12 as seed ortholog is 100%.
Bootstrap support for I3L650 as seed ortholog is 100%.

Group of orthologs #4235. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.scrofa:145

H2XZL7              	100.00%		F1RTD4              	100.00%
Bootstrap support for H2XZL7 as seed ortholog is 100%.
Bootstrap support for F1RTD4 as seed ortholog is 100%.

Group of orthologs #4236. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.scrofa:145

F6W5F4              	100.00%		I3LBF6              	100.00%
Bootstrap support for F6W5F4 as seed ortholog is 100%.
Bootstrap support for I3LBF6 as seed ortholog is 100%.

Group of orthologs #4237. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.scrofa:70

H2XUJ2              	100.00%		F1SMB1              	100.00%
Bootstrap support for H2XUJ2 as seed ortholog is 100%.
Bootstrap support for F1SMB1 as seed ortholog is 98%.

Group of orthologs #4238. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 S.scrofa:73

F6YTT5              	100.00%		I3LNZ2              	100.00%
Bootstrap support for F6YTT5 as seed ortholog is 88%.
Bootstrap support for I3LNZ2 as seed ortholog is 99%.

Group of orthologs #4239. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.scrofa:145

F6V725              	100.00%		Q6QA76              	100.00%
Bootstrap support for F6V725 as seed ortholog is 100%.
Bootstrap support for Q6QA76 as seed ortholog is 100%.

Group of orthologs #4240. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 S.scrofa:145

Q1RL31              	100.00%		F1SST2              	100.00%
Bootstrap support for Q1RL31 as seed ortholog is 100%.
Bootstrap support for F1SST2 as seed ortholog is 100%.

Group of orthologs #4241. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:144

H2XY48              	100.00%		F1SAS3              	100.00%
F6T511              	20.73%		
F6T526              	9.64%		
F6T505              	6.13%		
Bootstrap support for H2XY48 as seed ortholog is 93%.
Bootstrap support for F1SAS3 as seed ortholog is 100%.

Group of orthologs #4242. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 S.scrofa:1

F6QP05              	100.00%		F1SFF0              	100.00%
                    	       		F1SFF2              	18.61%
                    	       		I3LT62              	16.70%
Bootstrap support for F6QP05 as seed ortholog is 100%.
Bootstrap support for F1SFF0 as seed ortholog is 48%.
Alternative seed ortholog is I3LLK4 (1 bits away from this cluster)

Group of orthologs #4243. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 S.scrofa:144

F6QRK3              	100.00%		I3LJW8              	100.00%
                    	       		F1S2V4              	14.93%
                    	       		F1RWM2              	12.57%
Bootstrap support for F6QRK3 as seed ortholog is 100%.
Bootstrap support for I3LJW8 as seed ortholog is 100%.

Group of orthologs #4244. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 S.scrofa:144

H2XXK5              	100.00%		I3LPQ2              	100.00%
                    	       		F1RL25              	54.63%
Bootstrap support for H2XXK5 as seed ortholog is 100%.
Bootstrap support for I3LPQ2 as seed ortholog is 100%.

Group of orthologs #4245. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 S.scrofa:144

F6YPQ4              	100.00%		F1RQK5              	100.00%
Bootstrap support for F6YPQ4 as seed ortholog is 100%.
Bootstrap support for F1RQK5 as seed ortholog is 100%.

Group of orthologs #4246. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.scrofa:144

F7AUS4              	100.00%		F1S7P1              	100.00%
Bootstrap support for F7AUS4 as seed ortholog is 99%.
Bootstrap support for F1S7P1 as seed ortholog is 100%.

Group of orthologs #4247. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 S.scrofa:52

H2XRR7              	100.00%		F1SIM7              	100.00%
Bootstrap support for H2XRR7 as seed ortholog is 100%.
Bootstrap support for F1SIM7 as seed ortholog is 99%.

Group of orthologs #4248. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 S.scrofa:69

H2Y3H8              	100.00%		F1SC72              	100.00%
Bootstrap support for H2Y3H8 as seed ortholog is 100%.
Bootstrap support for F1SC72 as seed ortholog is 99%.

Group of orthologs #4249. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.scrofa:143

F6TBM3              	100.00%		F1S058              	100.00%
                    	       		I3LL69              	13.39%
Bootstrap support for F6TBM3 as seed ortholog is 100%.
Bootstrap support for F1S058 as seed ortholog is 100%.

Group of orthologs #4250. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.scrofa:143

F6Z6E4              	100.00%		F1S5L0              	100.00%
                    	       		F1S5K8              	21.29%
Bootstrap support for F6Z6E4 as seed ortholog is 100%.
Bootstrap support for F1S5L0 as seed ortholog is 100%.

Group of orthologs #4251. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.scrofa:143

F6U8M1              	100.00%		I3LPN6              	100.00%
                    	       		I3LT45              	67.11%
Bootstrap support for F6U8M1 as seed ortholog is 100%.
Bootstrap support for I3LPN6 as seed ortholog is 100%.

Group of orthologs #4252. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.scrofa:87

F7B012              	100.00%		I3L6T2              	100.00%
                    	       		I3LFW6              	81.94%
Bootstrap support for F7B012 as seed ortholog is 99%.
Bootstrap support for I3L6T2 as seed ortholog is 99%.

Group of orthologs #4253. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.scrofa:28

F6VJ60              	100.00%		Q865K9              	100.00%
                    	       		Q865K8              	31.65%
Bootstrap support for F6VJ60 as seed ortholog is 100%.
Bootstrap support for Q865K9 as seed ortholog is 73%.
Alternative seed ortholog is F1SIT9 (28 bits away from this cluster)

Group of orthologs #4254. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.scrofa:143

H2XQ66              	100.00%		I3LIB6              	100.00%
                    	       		I3L5R3              	41.10%
Bootstrap support for H2XQ66 as seed ortholog is 100%.
Bootstrap support for I3LIB6 as seed ortholog is 100%.

Group of orthologs #4255. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.scrofa:143

F6TEV5              	100.00%		D0G6R7              	100.00%
Bootstrap support for F6TEV5 as seed ortholog is 100%.
Bootstrap support for D0G6R7 as seed ortholog is 100%.

Group of orthologs #4256. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:143

F6U696              	100.00%		F1RGR5              	100.00%
Bootstrap support for F6U696 as seed ortholog is 96%.
Bootstrap support for F1RGR5 as seed ortholog is 100%.

Group of orthologs #4257. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.scrofa:143

F6VQ85              	100.00%		F1S0L4              	100.00%
Bootstrap support for F6VQ85 as seed ortholog is 100%.
Bootstrap support for F1S0L4 as seed ortholog is 100%.

Group of orthologs #4258. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.scrofa:143

H2XLP5              	100.00%		F1SLF5              	100.00%
Bootstrap support for H2XLP5 as seed ortholog is 100%.
Bootstrap support for F1SLF5 as seed ortholog is 100%.

Group of orthologs #4259. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 S.scrofa:143

F7AD29              	100.00%		I3LT93              	100.00%
Bootstrap support for F7AD29 as seed ortholog is 100%.
Bootstrap support for I3LT93 as seed ortholog is 100%.

Group of orthologs #4260. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 S.scrofa:143

H2Y2I0              	100.00%		I3LQC9              	100.00%
Bootstrap support for H2Y2I0 as seed ortholog is 56%.
Alternative seed ortholog is H2XXH0 (8 bits away from this cluster)
Bootstrap support for I3LQC9 as seed ortholog is 100%.

Group of orthologs #4261. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:83

F6ZYU1              	100.00%		Q9N1F5              	100.00%
F7AV59              	100.00%		F1S5N4              	100.00%
F7AUP3              	60.11%		F1S5N8              	58.76%
F7AY96              	59.30%		
L7N0S5              	36.93%		
Bootstrap support for F6ZYU1 as seed ortholog is 99%.
Bootstrap support for F7AV59 as seed ortholog is 99%.
Bootstrap support for Q9N1F5 as seed ortholog is 99%.
Bootstrap support for F1S5N4 as seed ortholog is 98%.

Group of orthologs #4262. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 S.scrofa:13

F6U7B2              	100.00%		F1RZ10              	100.00%
                    	       		I3LDQ7              	46.11%
Bootstrap support for F6U7B2 as seed ortholog is 68%.
Alternative seed ortholog is F6TCA9 (27 bits away from this cluster)
Bootstrap support for F1RZ10 as seed ortholog is 61%.
Alternative seed ortholog is F1RJG7 (13 bits away from this cluster)

Group of orthologs #4263. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 S.scrofa:45

F6QIH1              	100.00%		A1DWM3              	100.00%
Bootstrap support for F6QIH1 as seed ortholog is 100%.
Bootstrap support for A1DWM3 as seed ortholog is 99%.

Group of orthologs #4264. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 S.scrofa:142

F6T4T6              	100.00%		F1SQK9              	100.00%
Bootstrap support for F6T4T6 as seed ortholog is 100%.
Bootstrap support for F1SQK9 as seed ortholog is 100%.

Group of orthologs #4265. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 S.scrofa:142

F6VAW2              	100.00%		I3LGG8              	100.00%
Bootstrap support for F6VAW2 as seed ortholog is 100%.
Bootstrap support for I3LGG8 as seed ortholog is 100%.

Group of orthologs #4266. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 S.scrofa:142

H2XJN8              	100.00%		F1SMZ6              	100.00%
Bootstrap support for H2XJN8 as seed ortholog is 100%.
Bootstrap support for F1SMZ6 as seed ortholog is 100%.

Group of orthologs #4267. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 S.scrofa:142

H2XSZ0              	100.00%		I3L7D0              	100.00%
Bootstrap support for H2XSZ0 as seed ortholog is 81%.
Bootstrap support for I3L7D0 as seed ortholog is 100%.

Group of orthologs #4268. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 S.scrofa:141

F6PJ75              	100.00%		F1RKS6              	100.00%
                    	       		F1SH42              	37.26%
Bootstrap support for F6PJ75 as seed ortholog is 100%.
Bootstrap support for F1RKS6 as seed ortholog is 100%.

Group of orthologs #4269. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 S.scrofa:141

F6Q318              	100.00%		F1SL60              	100.00%
                    	       		I3L8P5              	74.81%
Bootstrap support for F6Q318 as seed ortholog is 100%.
Bootstrap support for F1SL60 as seed ortholog is 100%.

Group of orthologs #4270. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 S.scrofa:141

H2XKA1              	100.00%		A1XQR9              	100.00%
Bootstrap support for H2XKA1 as seed ortholog is 100%.
Bootstrap support for A1XQR9 as seed ortholog is 100%.

Group of orthologs #4271. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 S.scrofa:141

F6Q5B7              	100.00%		F1SK49              	100.00%
Bootstrap support for F6Q5B7 as seed ortholog is 100%.
Bootstrap support for F1SK49 as seed ortholog is 100%.

Group of orthologs #4272. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 S.scrofa:141

F6XPV2              	100.00%		F1RWF7              	100.00%
Bootstrap support for F6XPV2 as seed ortholog is 100%.
Bootstrap support for F1RWF7 as seed ortholog is 100%.

Group of orthologs #4273. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 S.scrofa:141

F6URT4              	100.00%		F1SCJ5              	100.00%
Bootstrap support for F6URT4 as seed ortholog is 100%.
Bootstrap support for F1SCJ5 as seed ortholog is 100%.

Group of orthologs #4274. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 S.scrofa:141

F6WCS0              	100.00%		I3LDX2              	100.00%
Bootstrap support for F6WCS0 as seed ortholog is 100%.
Bootstrap support for I3LDX2 as seed ortholog is 100%.

Group of orthologs #4275. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 S.scrofa:141

H2XU70              	100.00%		F1SG80              	100.00%
Bootstrap support for H2XU70 as seed ortholog is 100%.
Bootstrap support for F1SG80 as seed ortholog is 100%.

Group of orthologs #4276. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 S.scrofa:141

H2XSZ1              	100.00%		I3LGB3              	100.00%
Bootstrap support for H2XSZ1 as seed ortholog is 100%.
Bootstrap support for I3LGB3 as seed ortholog is 100%.

Group of orthologs #4277. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:69

H2Y0G1              	100.00%		P50118              	100.00%
Bootstrap support for H2Y0G1 as seed ortholog is 83%.
Bootstrap support for P50118 as seed ortholog is 83%.

Group of orthologs #4278. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.scrofa:140

F6U5S2              	100.00%		F1RZV6              	100.00%
                    	       		I3LP11              	47.72%
                    	       		F1RRV9              	31.41%
                    	       		I3LAN7              	19.90%
                    	       		I3LQH4              	6.47%
Bootstrap support for F6U5S2 as seed ortholog is 100%.
Bootstrap support for F1RZV6 as seed ortholog is 100%.

Group of orthologs #4279. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.scrofa:140

H2XJT6              	100.00%		I3LSY6              	100.00%
                    	       		F1RP56              	91.76%
                    	       		F1RP58              	82.65%
                    	       		F1RP57              	71.15%
                    	       		I3L858              	41.00%
Bootstrap support for H2XJT6 as seed ortholog is 100%.
Bootstrap support for I3LSY6 as seed ortholog is 100%.

Group of orthologs #4280. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.scrofa:140

H2XSH7              	100.00%		I3LLH8              	100.00%
H2XUF4              	13.73%		
Bootstrap support for H2XSH7 as seed ortholog is 100%.
Bootstrap support for I3LLH8 as seed ortholog is 100%.

Group of orthologs #4281. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.scrofa:140

H2XX23              	100.00%		I3LLK3              	100.00%
H2Y142              	95.28%		
Bootstrap support for H2XX23 as seed ortholog is 100%.
Bootstrap support for I3LLK3 as seed ortholog is 100%.

Group of orthologs #4282. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.scrofa:140

F7AG76              	100.00%		A5GFR5              	100.00%
Bootstrap support for F7AG76 as seed ortholog is 100%.
Bootstrap support for A5GFR5 as seed ortholog is 100%.

Group of orthologs #4283. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.scrofa:140

F6WIJ0              	100.00%		F1RU32              	100.00%
Bootstrap support for F6WIJ0 as seed ortholog is 100%.
Bootstrap support for F1RU32 as seed ortholog is 100%.

Group of orthologs #4284. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.scrofa:140

F6U1Q3              	100.00%		I3L633              	100.00%
Bootstrap support for F6U1Q3 as seed ortholog is 100%.
Bootstrap support for I3L633 as seed ortholog is 100%.

Group of orthologs #4285. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.scrofa:140

F6WHY6              	100.00%		F1STY9              	100.00%
Bootstrap support for F6WHY6 as seed ortholog is 100%.
Bootstrap support for F1STY9 as seed ortholog is 100%.

Group of orthologs #4286. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 S.scrofa:140

F6R6M9              	100.00%		K7GPC8              	100.00%
Bootstrap support for F6R6M9 as seed ortholog is 100%.
Bootstrap support for K7GPC8 as seed ortholog is 100%.

Group of orthologs #4287. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 S.scrofa:139

F6UGG0              	100.00%		D0G0B6              	100.00%
                    	       		Q4PLW0              	99.74%
                    	       		I3L7T9              	86.58%
                    	       		Q5BLZ2              	28.03%
                    	       		F1S7K3              	9.74%
Bootstrap support for F6UGG0 as seed ortholog is 100%.
Bootstrap support for D0G0B6 as seed ortholog is 100%.

Group of orthologs #4288. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 S.scrofa:139

F6T9S9              	100.00%		F1SCS2              	100.00%
                    	       		Q29031              	15.22%
                    	       		F1SMC4              	10.77%
Bootstrap support for F6T9S9 as seed ortholog is 100%.
Bootstrap support for F1SCS2 as seed ortholog is 100%.

Group of orthologs #4289. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 S.scrofa:98

F6RRL3              	100.00%		Q29315              	100.00%
                    	       		F1RNZ2              	59.46%
Bootstrap support for F6RRL3 as seed ortholog is 100%.
Bootstrap support for Q29315 as seed ortholog is 99%.

Group of orthologs #4290. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 S.scrofa:139

F6YUP1              	100.00%		F1S5Z1              	100.00%
Bootstrap support for F6YUP1 as seed ortholog is 100%.
Bootstrap support for F1S5Z1 as seed ortholog is 100%.

Group of orthologs #4291. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 S.scrofa:139

F6ZQH5              	100.00%		F1SDD2              	100.00%
Bootstrap support for F6ZQH5 as seed ortholog is 100%.
Bootstrap support for F1SDD2 as seed ortholog is 100%.

Group of orthologs #4292. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 S.scrofa:139

F6XCL4              	100.00%		I3LAB4              	100.00%
Bootstrap support for F6XCL4 as seed ortholog is 100%.
Bootstrap support for I3LAB4 as seed ortholog is 100%.

Group of orthologs #4293. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:138

F6YHY7              	100.00%		I3LIE9              	100.00%
                    	       		F1RT50              	82.27%
                    	       		F1S527              	36.08%
                    	       		F1RJ21              	35.67%
Bootstrap support for F6YHY7 as seed ortholog is 100%.
Bootstrap support for I3LIE9 as seed ortholog is 100%.

Group of orthologs #4294. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:138

F6TT30              	100.00%		I3LKJ4              	100.00%
                    	       		F1RIG0              	88.42%
                    	       		F1SL51              	16.01%
Bootstrap support for F6TT30 as seed ortholog is 100%.
Bootstrap support for I3LKJ4 as seed ortholog is 100%.

Group of orthologs #4295. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:138

F6WRV9              	100.00%		F1RS02              	100.00%
F6YHL8              	46.07%		
Bootstrap support for F6WRV9 as seed ortholog is 100%.
Bootstrap support for F1RS02 as seed ortholog is 100%.

Group of orthologs #4296. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 S.scrofa:16

F6X383              	100.00%		F1S0E6              	100.00%
                    	       		I3LUS5              	18.18%
Bootstrap support for F6X383 as seed ortholog is 71%.
Alternative seed ortholog is F6ZB81 (20 bits away from this cluster)
Bootstrap support for F1S0E6 as seed ortholog is 68%.
Alternative seed ortholog is F1RN19 (16 bits away from this cluster)

Group of orthologs #4297. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:138

F6U2R3              	100.00%		I3LK64              	100.00%
                    	       		F1SFG0              	12.23%
Bootstrap support for F6U2R3 as seed ortholog is 100%.
Bootstrap support for I3LK64 as seed ortholog is 100%.

Group of orthologs #4298. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:138

H2XSY0              	100.00%		I3LJ32              	100.00%
F6VSV8              	44.33%		
Bootstrap support for H2XSY0 as seed ortholog is 100%.
Bootstrap support for I3LJ32 as seed ortholog is 100%.

Group of orthologs #4299. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:138

F6XU45              	100.00%		F1RKQ6              	100.00%
Bootstrap support for F6XU45 as seed ortholog is 100%.
Bootstrap support for F1RKQ6 as seed ortholog is 100%.

Group of orthologs #4300. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:89

H2XRF7              	100.00%		F1RKG2              	100.00%
Bootstrap support for H2XRF7 as seed ortholog is 100%.
Bootstrap support for F1RKG2 as seed ortholog is 99%.

Group of orthologs #4301. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:138

F6YE24              	100.00%		I3L6I8              	100.00%
Bootstrap support for F6YE24 as seed ortholog is 100%.
Bootstrap support for I3L6I8 as seed ortholog is 100%.

Group of orthologs #4302. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:138

F6PZM1              	100.00%		Q2EN81              	100.00%
Bootstrap support for F6PZM1 as seed ortholog is 100%.
Bootstrap support for Q2EN81 as seed ortholog is 100%.

Group of orthologs #4303. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 S.scrofa:138

F6VEQ7              	100.00%		I3LU38              	100.00%
Bootstrap support for F6VEQ7 as seed ortholog is 100%.
Bootstrap support for I3LU38 as seed ortholog is 100%.

Group of orthologs #4304. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 S.scrofa:137

H2XR90              	100.00%		B5APV0              	100.00%
                    	       		F1SKQ9              	44.38%
Bootstrap support for H2XR90 as seed ortholog is 100%.
Bootstrap support for B5APV0 as seed ortholog is 100%.

Group of orthologs #4305. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.scrofa:137

H2XWX7              	100.00%		F1RWV1              	100.00%
H2XV01              	7.65%		
Bootstrap support for H2XWX7 as seed ortholog is 86%.
Bootstrap support for F1RWV1 as seed ortholog is 100%.

Group of orthologs #4306. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 S.scrofa:137

H2XNY4              	100.00%		I3L9Q7              	100.00%
                    	       		F1SQ18              	19.68%
Bootstrap support for H2XNY4 as seed ortholog is 100%.
Bootstrap support for I3L9Q7 as seed ortholog is 100%.

Group of orthologs #4307. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 S.scrofa:137

F7BA51              	100.00%		F1S0D8              	100.00%
Bootstrap support for F7BA51 as seed ortholog is 100%.
Bootstrap support for F1S0D8 as seed ortholog is 100%.

Group of orthologs #4308. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.scrofa:137

F6YLR6              	100.00%		F1ST88              	100.00%
Bootstrap support for F6YLR6 as seed ortholog is 99%.
Bootstrap support for F1ST88 as seed ortholog is 100%.

Group of orthologs #4309. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 S.scrofa:137

F6YVB6              	100.00%		F1STG3              	100.00%
Bootstrap support for F6YVB6 as seed ortholog is 100%.
Bootstrap support for F1STG3 as seed ortholog is 100%.

Group of orthologs #4310. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 S.scrofa:14

F6RRK4              	100.00%		Q5S1U1              	100.00%
Bootstrap support for F6RRK4 as seed ortholog is 100%.
Bootstrap support for Q5S1U1 as seed ortholog is 70%.
Alternative seed ortholog is Q7M2W6 (14 bits away from this cluster)

Group of orthologs #4311. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 S.scrofa:22

F6SU68              	100.00%		F1S2T6              	100.00%
                    	       		O02772              	40.30%
                    	       		F1STV2              	34.33%
                    	       		I3LTW5              	29.85%
                    	       		P86412              	20.15%
                    	       		O97788              	14.93%
                    	       		I3LGA3              	11.94%
Bootstrap support for F6SU68 as seed ortholog is 95%.
Bootstrap support for F1S2T6 as seed ortholog is 87%.

Group of orthologs #4312. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:38

H2XZF2              	100.00%		A5JVA0              	100.00%
                    	       		B3XXC2              	34.24%
                    	       		Q5I2M3              	24.13%
Bootstrap support for H2XZF2 as seed ortholog is 100%.
Bootstrap support for A5JVA0 as seed ortholog is 93%.

Group of orthologs #4313. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 S.scrofa:56

H2XMJ0              	100.00%		I3L6I5              	100.00%
                    	       		F1SCX0              	17.78%
                    	       		I3L6W4              	13.73%
Bootstrap support for H2XMJ0 as seed ortholog is 86%.
Bootstrap support for I3L6I5 as seed ortholog is 96%.

Group of orthologs #4314. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 S.scrofa:136

F6X863              	100.00%		O18994              	100.00%
                    	       		J9JIK0              	34.97%
                    	       		Q8MJ14              	10.12%
Bootstrap support for F6X863 as seed ortholog is 77%.
Bootstrap support for O18994 as seed ortholog is 100%.

Group of orthologs #4315. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:136

F6Q8S1              	100.00%		I3LG01              	100.00%
                    	       		F1RL91              	9.71%
Bootstrap support for F6Q8S1 as seed ortholog is 100%.
Bootstrap support for I3LG01 as seed ortholog is 100%.

Group of orthologs #4316. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:136

H2Y1W5              	100.00%		F1RSB7              	100.00%
                    	       		F1RSB9              	100.00%
Bootstrap support for H2Y1W5 as seed ortholog is 100%.
Bootstrap support for F1RSB7 as seed ortholog is 100%.
Bootstrap support for F1RSB9 as seed ortholog is 100%.

Group of orthologs #4317. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:136

F6TPM4              	100.00%		F1RKA6              	100.00%
Bootstrap support for F6TPM4 as seed ortholog is 100%.
Bootstrap support for F1RKA6 as seed ortholog is 100%.

Group of orthologs #4318. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:79

F6SGR7              	100.00%		F1RYB1              	100.00%
Bootstrap support for F6SGR7 as seed ortholog is 100%.
Bootstrap support for F1RYB1 as seed ortholog is 99%.

Group of orthologs #4319. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:136

F6TN36              	100.00%		F1RVX5              	100.00%
Bootstrap support for F6TN36 as seed ortholog is 100%.
Bootstrap support for F1RVX5 as seed ortholog is 100%.

Group of orthologs #4320. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:136

F6SIS7              	100.00%		F1S0U2              	100.00%
Bootstrap support for F6SIS7 as seed ortholog is 100%.
Bootstrap support for F1S0U2 as seed ortholog is 100%.

Group of orthologs #4321. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:17

F6YB21              	100.00%		F1RT21              	100.00%
Bootstrap support for F6YB21 as seed ortholog is 100%.
Bootstrap support for F1RT21 as seed ortholog is 76%.

Group of orthologs #4322. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:136

F7AUH4              	100.00%		F1RU54              	100.00%
Bootstrap support for F7AUH4 as seed ortholog is 100%.
Bootstrap support for F1RU54 as seed ortholog is 100%.

Group of orthologs #4323. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:136

F6U8D6              	100.00%		F1SJJ1              	100.00%
Bootstrap support for F6U8D6 as seed ortholog is 100%.
Bootstrap support for F1SJJ1 as seed ortholog is 100%.

Group of orthologs #4324. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:136

F6SKV4              	100.00%		F1SS29              	100.00%
Bootstrap support for F6SKV4 as seed ortholog is 100%.
Bootstrap support for F1SS29 as seed ortholog is 100%.

Group of orthologs #4325. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:136

F6ZQ14              	100.00%		F1S363              	100.00%
Bootstrap support for F6ZQ14 as seed ortholog is 100%.
Bootstrap support for F1S363 as seed ortholog is 100%.

Group of orthologs #4326. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 S.scrofa:136

F6V1K9              	100.00%		I3LIR0              	100.00%
Bootstrap support for F6V1K9 as seed ortholog is 100%.
Bootstrap support for I3LIR0 as seed ortholog is 100%.

Group of orthologs #4327. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.scrofa:135

F7A491              	100.00%		F1RZD0              	100.00%
                    	       		I3LJ41              	19.33%
Bootstrap support for F7A491 as seed ortholog is 99%.
Bootstrap support for F1RZD0 as seed ortholog is 100%.

Group of orthologs #4328. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.scrofa:135

H2Y0C8              	100.00%		F1S678              	100.00%
                    	       		F1SD82              	45.58%
Bootstrap support for H2Y0C8 as seed ortholog is 100%.
Bootstrap support for F1S678 as seed ortholog is 100%.

Group of orthologs #4329. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.scrofa:135

F6ZH72              	100.00%		I3LCM4              	100.00%
                    	       		I3LPU4              	55.22%
Bootstrap support for F6ZH72 as seed ortholog is 100%.
Bootstrap support for I3LCM4 as seed ortholog is 100%.

Group of orthologs #4330. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.scrofa:135

H2XT18              	100.00%		I3L5D1              	100.00%
                    	       		I3LSA8              	11.81%
Bootstrap support for H2XT18 as seed ortholog is 100%.
Bootstrap support for I3L5D1 as seed ortholog is 100%.

Group of orthologs #4331. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.scrofa:135

F6QKM5              	100.00%		F1SPJ0              	100.00%
Bootstrap support for F6QKM5 as seed ortholog is 100%.
Bootstrap support for F1SPJ0 as seed ortholog is 100%.

Group of orthologs #4332. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.scrofa:135

F6U8L4              	100.00%		F1SSG8              	100.00%
Bootstrap support for F6U8L4 as seed ortholog is 100%.
Bootstrap support for F1SSG8 as seed ortholog is 100%.

Group of orthologs #4333. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.scrofa:135

H2XNY2              	100.00%		F1S3H0              	100.00%
Bootstrap support for H2XNY2 as seed ortholog is 100%.
Bootstrap support for F1S3H0 as seed ortholog is 100%.

Group of orthologs #4334. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.scrofa:135

F6W8L4              	100.00%		P00258              	100.00%
Bootstrap support for F6W8L4 as seed ortholog is 100%.
Bootstrap support for P00258 as seed ortholog is 100%.

Group of orthologs #4335. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 S.scrofa:22

H2XMX4              	100.00%		I3LBG1              	100.00%
Bootstrap support for H2XMX4 as seed ortholog is 100%.
Bootstrap support for I3LBG1 as seed ortholog is 76%.

Group of orthologs #4336. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.scrofa:40

H2XL39              	100.00%		F1SRH8              	100.00%
                    	       		I3L8K7              	26.56%
                    	       		Q712P7              	24.18%
Bootstrap support for H2XL39 as seed ortholog is 95%.
Bootstrap support for F1SRH8 as seed ortholog is 92%.

Group of orthologs #4337. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:134

F6YYF3              	100.00%		I3LQ80              	100.00%
F6SY47              	93.75%		F1RIR6              	9.61%
Bootstrap support for F6YYF3 as seed ortholog is 100%.
Bootstrap support for I3LQ80 as seed ortholog is 100%.

Group of orthologs #4338. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:134

F6WVZ0              	100.00%		F1RIV2              	100.00%
                    	       		F1SKP5              	32.92%
Bootstrap support for F6WVZ0 as seed ortholog is 100%.
Bootstrap support for F1RIV2 as seed ortholog is 100%.

Group of orthologs #4339. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:134

F6SNI9              	100.00%		F1RKY1              	100.00%
Bootstrap support for F6SNI9 as seed ortholog is 100%.
Bootstrap support for F1RKY1 as seed ortholog is 100%.

Group of orthologs #4340. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:134

F6U899              	100.00%		F1RII4              	100.00%
Bootstrap support for F6U899 as seed ortholog is 100%.
Bootstrap support for F1RII4 as seed ortholog is 100%.

Group of orthologs #4341. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:134

F6YRL7              	100.00%		F1RFJ6              	100.00%
Bootstrap support for F6YRL7 as seed ortholog is 100%.
Bootstrap support for F1RFJ6 as seed ortholog is 100%.

Group of orthologs #4342. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:134

F7ADC2              	100.00%		F1RJE7              	100.00%
Bootstrap support for F7ADC2 as seed ortholog is 100%.
Bootstrap support for F1RJE7 as seed ortholog is 100%.

Group of orthologs #4343. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:134

F7ARW3              	100.00%		F1RX39              	100.00%
Bootstrap support for F7ARW3 as seed ortholog is 100%.
Bootstrap support for F1RX39 as seed ortholog is 100%.

Group of orthologs #4344. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:134

F6WII1              	100.00%		F1SE01              	100.00%
Bootstrap support for F6WII1 as seed ortholog is 100%.
Bootstrap support for F1SE01 as seed ortholog is 100%.

Group of orthologs #4345. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:52

H2XUT9              	100.00%		F1RU33              	100.00%
Bootstrap support for H2XUT9 as seed ortholog is 100%.
Bootstrap support for F1RU33 as seed ortholog is 99%.

Group of orthologs #4346. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:134

F6Z0W4              	100.00%		F1SQP4              	100.00%
Bootstrap support for F6Z0W4 as seed ortholog is 100%.
Bootstrap support for F1SQP4 as seed ortholog is 100%.

Group of orthologs #4347. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:134

F6ZEC1              	100.00%		I3L659              	100.00%
Bootstrap support for F6ZEC1 as seed ortholog is 100%.
Bootstrap support for I3L659 as seed ortholog is 100%.

Group of orthologs #4348. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:134

F6Z2Y2              	100.00%		I3L8R3              	100.00%
Bootstrap support for F6Z2Y2 as seed ortholog is 100%.
Bootstrap support for I3L8R3 as seed ortholog is 100%.

Group of orthologs #4349. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:66

H2XVK4              	100.00%		F1SIU7              	100.00%
Bootstrap support for H2XVK4 as seed ortholog is 100%.
Bootstrap support for F1SIU7 as seed ortholog is 96%.

Group of orthologs #4350. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:134

F6ZII8              	100.00%		I3LL21              	100.00%
Bootstrap support for F6ZII8 as seed ortholog is 100%.
Bootstrap support for I3LL21 as seed ortholog is 100%.

Group of orthologs #4351. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 S.scrofa:134

H2XUF7              	100.00%		I3LPE2              	100.00%
Bootstrap support for H2XUF7 as seed ortholog is 100%.
Bootstrap support for I3LPE2 as seed ortholog is 100%.

Group of orthologs #4352. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.scrofa:133

F7A9T3              	100.00%		F1RWU9              	100.00%
                    	       		K7GR91              	18.75%
Bootstrap support for F7A9T3 as seed ortholog is 100%.
Bootstrap support for F1RWU9 as seed ortholog is 100%.

Group of orthologs #4353. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.scrofa:133

H2XMF4              	100.00%		F1SBX8              	100.00%
                    	       		Q7M329              	81.77%
Bootstrap support for H2XMF4 as seed ortholog is 100%.
Bootstrap support for F1SBX8 as seed ortholog is 100%.

Group of orthologs #4354. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.scrofa:133

H2XLB1              	100.00%		P00377              	100.00%
H2XNW6              	29.28%		
Bootstrap support for H2XLB1 as seed ortholog is 100%.
Bootstrap support for P00377 as seed ortholog is 100%.

Group of orthologs #4355. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 S.scrofa:41

H2Y0G2              	100.00%		I3LQD0              	100.00%
                    	       		F1SJH3              	35.23%
Bootstrap support for H2Y0G2 as seed ortholog is 44%.
Alternative seed ortholog is F6T2A6 (1 bits away from this cluster)
Bootstrap support for I3LQD0 as seed ortholog is 98%.

Group of orthologs #4356. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.scrofa:39

F6SJU9              	100.00%		F1S6A9              	100.00%
Bootstrap support for F6SJU9 as seed ortholog is 76%.
Bootstrap support for F1S6A9 as seed ortholog is 91%.

Group of orthologs #4357. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.scrofa:133

F6U981              	100.00%		F1SH40              	100.00%
Bootstrap support for F6U981 as seed ortholog is 100%.
Bootstrap support for F1SH40 as seed ortholog is 100%.

Group of orthologs #4358. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.scrofa:133

F6YVX9              	100.00%		F1S4B4              	100.00%
Bootstrap support for F6YVX9 as seed ortholog is 100%.
Bootstrap support for F1S4B4 as seed ortholog is 100%.

Group of orthologs #4359. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.scrofa:65

F6WNV4              	100.00%		F1SR31              	100.00%
Bootstrap support for F6WNV4 as seed ortholog is 100%.
Bootstrap support for F1SR31 as seed ortholog is 99%.

Group of orthologs #4360. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 S.scrofa:133

H2XRY4              	100.00%		F1S1W0              	100.00%
Bootstrap support for H2XRY4 as seed ortholog is 64%.
Alternative seed ortholog is H2XUN8 (12 bits away from this cluster)
Bootstrap support for F1S1W0 as seed ortholog is 100%.

Group of orthologs #4361. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.scrofa:133

H2Y026              	100.00%		F1RQP1              	100.00%
Bootstrap support for H2Y026 as seed ortholog is 100%.
Bootstrap support for F1RQP1 as seed ortholog is 100%.

Group of orthologs #4362. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.scrofa:133

F6XCN2              	100.00%		F2Z518              	100.00%
Bootstrap support for F6XCN2 as seed ortholog is 100%.
Bootstrap support for F2Z518 as seed ortholog is 100%.

Group of orthologs #4363. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.scrofa:133

F6RRD5              	100.00%		I3LLW3              	100.00%
Bootstrap support for F6RRD5 as seed ortholog is 100%.
Bootstrap support for I3LLW3 as seed ortholog is 100%.

Group of orthologs #4364. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 S.scrofa:133

H2XQM2              	100.00%		F1SDL0              	100.00%
Bootstrap support for H2XQM2 as seed ortholog is 100%.
Bootstrap support for F1SDL0 as seed ortholog is 100%.

Group of orthologs #4365. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.scrofa:61

F7AXY8              	100.00%		F1SLB5              	100.00%
                    	       		B2MW86              	46.33%
                    	       		A8W649              	36.96%
                    	       		B2MUK1              	30.63%
                    	       		Q6PQZ1              	25.06%
                    	       		I3LAR7              	15.44%
Bootstrap support for F7AXY8 as seed ortholog is 93%.
Bootstrap support for F1SLB5 as seed ortholog is 95%.

Group of orthologs #4366. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.scrofa:132

F6WFW0              	100.00%		F1RN17              	100.00%
                    	       		I3L6M9              	17.57%
Bootstrap support for F6WFW0 as seed ortholog is 100%.
Bootstrap support for F1RN17 as seed ortholog is 100%.

Group of orthologs #4367. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 S.scrofa:15

F6QJI6              	100.00%		I3LBA8              	100.00%
                    	       		F1SMP2              	97.98%
Bootstrap support for F6QJI6 as seed ortholog is 66%.
Alternative seed ortholog is F6QL68 (10 bits away from this cluster)
Bootstrap support for I3LBA8 as seed ortholog is 71%.
Alternative seed ortholog is F1SBR0 (15 bits away from this cluster)

Group of orthologs #4368. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.scrofa:132

F7ATT5              	100.00%		I3LT00              	100.00%
                    	       		I3LAA1              	98.20%
Bootstrap support for F7ATT5 as seed ortholog is 100%.
Bootstrap support for I3LT00 as seed ortholog is 100%.

Group of orthologs #4369. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.scrofa:132

H2XMP3              	100.00%		O97763              	100.00%
F6TKD8              	10.44%		
Bootstrap support for H2XMP3 as seed ortholog is 100%.
Bootstrap support for O97763 as seed ortholog is 100%.

Group of orthologs #4370. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.scrofa:69

H2XTN5              	100.00%		I3LUP6              	100.00%
                    	       		F1RZM2              	30.50%
Bootstrap support for H2XTN5 as seed ortholog is 100%.
Bootstrap support for I3LUP6 as seed ortholog is 76%.

Group of orthologs #4371. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.scrofa:132

F6SLJ7              	100.00%		F1RNS8              	100.00%
Bootstrap support for F6SLJ7 as seed ortholog is 100%.
Bootstrap support for F1RNS8 as seed ortholog is 100%.

Group of orthologs #4372. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.scrofa:132

F6TX28              	100.00%		F1RST9              	100.00%
Bootstrap support for F6TX28 as seed ortholog is 100%.
Bootstrap support for F1RST9 as seed ortholog is 100%.

Group of orthologs #4373. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.scrofa:132

F6TT48              	100.00%		F1S0S5              	100.00%
Bootstrap support for F6TT48 as seed ortholog is 100%.
Bootstrap support for F1S0S5 as seed ortholog is 100%.

Group of orthologs #4374. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.scrofa:132

F6WIH5              	100.00%		F1S862              	100.00%
Bootstrap support for F6WIH5 as seed ortholog is 100%.
Bootstrap support for F1S862 as seed ortholog is 100%.

Group of orthologs #4375. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.scrofa:132

H2XPC5              	100.00%		F1RI89              	100.00%
Bootstrap support for H2XPC5 as seed ortholog is 100%.
Bootstrap support for F1RI89 as seed ortholog is 100%.

Group of orthologs #4376. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.scrofa:132

F6RQC5              	100.00%		I3L7X7              	100.00%
Bootstrap support for F6RQC5 as seed ortholog is 100%.
Bootstrap support for I3L7X7 as seed ortholog is 100%.

Group of orthologs #4377. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.scrofa:132

H2XKJ0              	100.00%		F1SHK2              	100.00%
Bootstrap support for H2XKJ0 as seed ortholog is 100%.
Bootstrap support for F1SHK2 as seed ortholog is 100%.

Group of orthologs #4378. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 S.scrofa:132

H2Y2F7              	100.00%		F1SCZ6              	100.00%
Bootstrap support for H2Y2F7 as seed ortholog is 100%.
Bootstrap support for F1SCZ6 as seed ortholog is 100%.

Group of orthologs #4379. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 S.scrofa:13

F6TXI5              	100.00%		F1RL81              	100.00%
F7AWY7              	19.35%		
F7BEK9              	19.35%		
F6U973              	18.71%		
F7BDP7              	15.16%		
F6VXK0              	14.19%		
F6XKL3              	13.55%		
H2XS77              	13.23%		
H2XZS1              	13.23%		
F6S294              	11.29%		
L7N0R4              	10.65%		
F6S2B0              	10.00%		
F6XKJ1              	9.35%		
F7B9X1              	8.71%		
H2XUP4              	6.13%		
Bootstrap support for F6TXI5 as seed ortholog is 64%.
Alternative seed ortholog is F6QH75 (13 bits away from this cluster)
Bootstrap support for F1RL81 as seed ortholog is 65%.
Alternative seed ortholog is Q29529 (13 bits away from this cluster)

Group of orthologs #4380. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:14

F6RGU6              	100.00%		I3LD49              	100.00%
F6RBY6              	100.00%		F1S9T3              	100.00%
F6RGC9              	23.95%		F1SCM7              	30.27%
F6RQN0              	20.27%		
F6VLS5              	7.07%		
Bootstrap support for F6RGU6 as seed ortholog is 100%.
Bootstrap support for F6RBY6 as seed ortholog is 100%.
Bootstrap support for I3LD49 as seed ortholog is 68%.
Alternative seed ortholog is F1SKZ9 (14 bits away from this cluster)
Bootstrap support for F1S9T3 as seed ortholog is 79%.

Group of orthologs #4381. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.scrofa:70

H2XZB8              	100.00%		F1SB43              	100.00%
                    	       		F1STT2              	9.50%
                    	       		F1S1M2              	6.41%
                    	       		F1STQ1              	5.70%
Bootstrap support for H2XZB8 as seed ortholog is 94%.
Bootstrap support for F1SB43 as seed ortholog is 99%.

Group of orthologs #4382. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:131

Q1RL92              	100.00%		A5GFT6              	100.00%
                    	       		F1SNN4              	41.62%
                    	       		I3L6A2              	29.47%
Bootstrap support for Q1RL92 as seed ortholog is 100%.
Bootstrap support for A5GFT6 as seed ortholog is 100%.

Group of orthologs #4383. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 S.scrofa:25

F7A2L3              	100.00%		I3LVL5              	100.00%
                    	       		F1RPZ6              	54.94%
                    	       		F1RPZ4              	19.49%
Bootstrap support for F7A2L3 as seed ortholog is 84%.
Bootstrap support for I3LVL5 as seed ortholog is 80%.

Group of orthologs #4384. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:131

F6T6Y7              	100.00%		F1RXX7              	100.00%
                    	       		I3LKX8              	40.22%
Bootstrap support for F6T6Y7 as seed ortholog is 100%.
Bootstrap support for F1RXX7 as seed ortholog is 100%.

Group of orthologs #4385. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:62

F6ZXM0              	100.00%		F1RU50              	100.00%
Bootstrap support for F6ZXM0 as seed ortholog is 100%.
Bootstrap support for F1RU50 as seed ortholog is 97%.

Group of orthologs #4386. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:131

F6QV69              	100.00%		F1SQK7              	100.00%
Bootstrap support for F6QV69 as seed ortholog is 100%.
Bootstrap support for F1SQK7 as seed ortholog is 100%.

Group of orthologs #4387. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:131

H2XL53              	100.00%		F1S6Z3              	100.00%
Bootstrap support for H2XL53 as seed ortholog is 100%.
Bootstrap support for F1S6Z3 as seed ortholog is 100%.

Group of orthologs #4388. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:131

F6R2L1              	100.00%		I3LIQ4              	100.00%
Bootstrap support for F6R2L1 as seed ortholog is 100%.
Bootstrap support for I3LIQ4 as seed ortholog is 100%.

Group of orthologs #4389. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:131

F6ZRA2              	100.00%		I3LSY9              	100.00%
Bootstrap support for F6ZRA2 as seed ortholog is 100%.
Bootstrap support for I3LSY9 as seed ortholog is 100%.

Group of orthologs #4390. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.scrofa:83

F6YBB2              	100.00%		Q08353              	100.00%
Bootstrap support for F6YBB2 as seed ortholog is 97%.
Bootstrap support for Q08353 as seed ortholog is 99%.

Group of orthologs #4391. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:131

Q4H376              	100.00%		F2Z5K0              	100.00%
Bootstrap support for Q4H376 as seed ortholog is 100%.
Bootstrap support for F2Z5K0 as seed ortholog is 100%.

Group of orthologs #4392. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:131

H2XNI4              	100.00%		P52650              	100.00%
Bootstrap support for H2XNI4 as seed ortholog is 100%.
Bootstrap support for P52650 as seed ortholog is 100%.

Group of orthologs #4393. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 S.scrofa:131

H2XW59              	100.00%		Q29081              	100.00%
Bootstrap support for H2XW59 as seed ortholog is 100%.
Bootstrap support for Q29081 as seed ortholog is 100%.

Group of orthologs #4394. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 S.scrofa:28

F6VM90              	100.00%		I3LPR3              	100.00%
F6V276              	13.18%		Q8WMQ3              	98.50%
F6V166              	13.18%		F1SAW5              	23.42%
F6V0K9              	8.53%		
Bootstrap support for F6VM90 as seed ortholog is 88%.
Bootstrap support for I3LPR3 as seed ortholog is 79%.

Group of orthologs #4395. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:48

F6SGF2              	100.00%		Q59HI5              	100.00%
                    	       		Q59HI9              	40.13%
                    	       		Q59HI6              	38.56%
                    	       		Q59HI8              	12.46%
Bootstrap support for F6SGF2 as seed ortholog is 96%.
Bootstrap support for Q59HI5 as seed ortholog is 71%.
Alternative seed ortholog is F1SF23 (48 bits away from this cluster)

Group of orthologs #4396. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.scrofa:130

F6U930              	100.00%		I3LC26              	100.00%
                    	       		F1SJQ2              	10.70%
Bootstrap support for F6U930 as seed ortholog is 100%.
Bootstrap support for I3LC26 as seed ortholog is 100%.

Group of orthologs #4397. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.scrofa:130

F6ZGB7              	100.00%		F1RHJ1              	100.00%
Bootstrap support for F6ZGB7 as seed ortholog is 100%.
Bootstrap support for F1RHJ1 as seed ortholog is 100%.

Group of orthologs #4398. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.scrofa:130

F6V2B2              	100.00%		F1S435              	100.00%
Bootstrap support for F6V2B2 as seed ortholog is 100%.
Bootstrap support for F1S435 as seed ortholog is 100%.

Group of orthologs #4399. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.scrofa:43

F6XQP8              	100.00%		F1S108              	100.00%
Bootstrap support for F6XQP8 as seed ortholog is 100%.
Bootstrap support for F1S108 as seed ortholog is 99%.

Group of orthologs #4400. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.scrofa:130

F6QXX8              	100.00%		I3LET0              	100.00%
Bootstrap support for F6QXX8 as seed ortholog is 100%.
Bootstrap support for I3LET0 as seed ortholog is 100%.

Group of orthologs #4401. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.scrofa:130

H2XVI8              	100.00%		F1S000              	100.00%
Bootstrap support for H2XVI8 as seed ortholog is 100%.
Bootstrap support for F1S000 as seed ortholog is 100%.

Group of orthologs #4402. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.scrofa:130

F7AQV0              	100.00%		F2Z526              	100.00%
Bootstrap support for F7AQV0 as seed ortholog is 100%.
Bootstrap support for F2Z526 as seed ortholog is 100%.

Group of orthologs #4403. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 S.scrofa:130

H2Y1A3              	100.00%		I3LD01              	100.00%
Bootstrap support for H2Y1A3 as seed ortholog is 100%.
Bootstrap support for I3LD01 as seed ortholog is 100%.

Group of orthologs #4404. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:30

C4B8X5              	100.00%		F1SS43              	100.00%
                    	       		F1S6K2              	27.89%
                    	       		F1RWK0              	25.85%
Bootstrap support for C4B8X5 as seed ortholog is 100%.
Bootstrap support for F1SS43 as seed ortholog is 81%.

Group of orthologs #4405. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:129

F6SN53              	100.00%		I3LJY2              	100.00%
                    	       		I3LNJ7              	9.39%
Bootstrap support for F6SN53 as seed ortholog is 100%.
Bootstrap support for I3LJY2 as seed ortholog is 100%.

Group of orthologs #4406. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:129

H2XKX7              	100.00%		I3LT67              	100.00%
                    	       		F2Z5H3              	58.97%
Bootstrap support for H2XKX7 as seed ortholog is 100%.
Bootstrap support for I3LT67 as seed ortholog is 100%.

Group of orthologs #4407. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:129

F6Z0S6              	100.00%		F1RF56              	100.00%
Bootstrap support for F6Z0S6 as seed ortholog is 100%.
Bootstrap support for F1RF56 as seed ortholog is 100%.

Group of orthologs #4408. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:129

F7A0C5              	100.00%		F1RSD6              	100.00%
Bootstrap support for F7A0C5 as seed ortholog is 100%.
Bootstrap support for F1RSD6 as seed ortholog is 100%.

Group of orthologs #4409. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:129

F6YC04              	100.00%		F1SKZ0              	100.00%
Bootstrap support for F6YC04 as seed ortholog is 100%.
Bootstrap support for F1SKZ0 as seed ortholog is 100%.

Group of orthologs #4410. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.scrofa:129

F6UGJ2              	100.00%		I3LN24              	100.00%
Bootstrap support for F6UGJ2 as seed ortholog is 77%.
Bootstrap support for I3LN24 as seed ortholog is 100%.

Group of orthologs #4411. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:73

H2Y2X6              	100.00%		F1S3F3              	100.00%
Bootstrap support for H2Y2X6 as seed ortholog is 100%.
Bootstrap support for F1S3F3 as seed ortholog is 99%.

Group of orthologs #4412. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:129

F6WNP9              	100.00%		I3LQH7              	100.00%
Bootstrap support for F6WNP9 as seed ortholog is 100%.
Bootstrap support for I3LQH7 as seed ortholog is 100%.

Group of orthologs #4413. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:73

F6Z3Z5              	100.00%		P79382              	100.00%
Bootstrap support for F6Z3Z5 as seed ortholog is 100%.
Bootstrap support for P79382 as seed ortholog is 99%.

Group of orthologs #4414. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:129

F7BJE1              	100.00%		I3LSR5              	100.00%
Bootstrap support for F7BJE1 as seed ortholog is 100%.
Bootstrap support for I3LSR5 as seed ortholog is 100%.

Group of orthologs #4415. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:129

H2Y285              	100.00%		I3L653              	100.00%
Bootstrap support for H2Y285 as seed ortholog is 100%.
Bootstrap support for I3L653 as seed ortholog is 100%.

Group of orthologs #4416. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 S.scrofa:129

H2Y2T2              	100.00%		I3L6M1              	100.00%
Bootstrap support for H2Y2T2 as seed ortholog is 100%.
Bootstrap support for I3L6M1 as seed ortholog is 100%.

Group of orthologs #4417. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.scrofa:128

F6QEK5              	100.00%		Q28985              	100.00%
                    	       		F1SS18              	78.15%
                    	       		K7GLI1              	46.40%
                    	       		P16611              	24.32%
                    	       		P24854              	13.06%
Bootstrap support for F6QEK5 as seed ortholog is 100%.
Bootstrap support for Q28985 as seed ortholog is 100%.

Group of orthologs #4418. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.scrofa:128

F6YMW5              	100.00%		F1RM52              	100.00%
                    	       		F1RM53              	58.76%
                    	       		F1RP69              	39.86%
Bootstrap support for F6YMW5 as seed ortholog is 100%.
Bootstrap support for F1RM52 as seed ortholog is 100%.

Group of orthologs #4419. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.scrofa:128

Q4H3J9              	100.00%		O97930              	100.00%
                    	       		I3LGN0              	7.28%
                    	       		F1RU26              	6.49%
Bootstrap support for Q4H3J9 as seed ortholog is 100%.
Bootstrap support for O97930 as seed ortholog is 100%.

Group of orthologs #4420. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 S.scrofa:128

F6YH02              	100.00%		F1S0M0              	100.00%
                    	       		F1SCU3              	11.69%
Bootstrap support for F6YH02 as seed ortholog is 49%.
Alternative seed ortholog is H2XV92 (1 bits away from this cluster)
Bootstrap support for F1S0M0 as seed ortholog is 100%.

Group of orthologs #4421. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.scrofa:128

H2XM22              	100.00%		F1RK50              	100.00%
                    	       		F1SNA3              	61.47%
Bootstrap support for H2XM22 as seed ortholog is 100%.
Bootstrap support for F1RK50 as seed ortholog is 100%.

Group of orthologs #4422. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.scrofa:128

Q4H3L8              	100.00%		B0LDT4              	100.00%
                    	       		F1RLP4              	19.59%
Bootstrap support for Q4H3L8 as seed ortholog is 100%.
Bootstrap support for B0LDT4 as seed ortholog is 100%.

Group of orthologs #4423. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.scrofa:128

H2XRT0              	100.00%		I3LPS9              	100.00%
                    	       		F1SLT1              	9.09%
Bootstrap support for H2XRT0 as seed ortholog is 100%.
Bootstrap support for I3LPS9 as seed ortholog is 100%.

Group of orthologs #4424. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.scrofa:66

F6Y8A2              	100.00%		F1RWY6              	100.00%
Bootstrap support for F6Y8A2 as seed ortholog is 100%.
Bootstrap support for F1RWY6 as seed ortholog is 95%.

Group of orthologs #4425. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.scrofa:128

H2XR49              	100.00%		I3L777              	100.00%
Bootstrap support for H2XR49 as seed ortholog is 95%.
Bootstrap support for I3L777 as seed ortholog is 100%.

Group of orthologs #4426. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 S.scrofa:128

H2XW76              	100.00%		I3LPI1              	100.00%
Bootstrap support for H2XW76 as seed ortholog is 100%.
Bootstrap support for I3LPI1 as seed ortholog is 100%.

Group of orthologs #4427. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.scrofa:127

F6VZ53              	100.00%		F1STE4              	100.00%
H2XVW7              	22.22%		
H2XLX5              	9.96%		
Bootstrap support for F6VZ53 as seed ortholog is 99%.
Bootstrap support for F1STE4 as seed ortholog is 100%.

Group of orthologs #4428. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 S.scrofa:17

F6ZDG8              	100.00%		F1SG06              	100.00%
H2XYM0              	15.37%		
Bootstrap support for F6ZDG8 as seed ortholog is 100%.
Bootstrap support for F1SG06 as seed ortholog is 74%.
Alternative seed ortholog is F1RVX7 (17 bits away from this cluster)

Group of orthologs #4429. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 S.scrofa:68

F7AQH5              	100.00%		F1RQL2              	100.00%
Bootstrap support for F7AQH5 as seed ortholog is 100%.
Bootstrap support for F1RQL2 as seed ortholog is 99%.

Group of orthologs #4430. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 S.scrofa:127

F6S0A3              	100.00%		K7GPP5              	100.00%
Bootstrap support for F6S0A3 as seed ortholog is 100%.
Bootstrap support for K7GPP5 as seed ortholog is 100%.

Group of orthologs #4431. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 S.scrofa:127

F7AW07              	100.00%		I3L7E1              	100.00%
Bootstrap support for F7AW07 as seed ortholog is 100%.
Bootstrap support for I3L7E1 as seed ortholog is 100%.

Group of orthologs #4432. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:126

H2XJW9              	100.00%		I3LCI8              	100.00%
                    	       		F1SGM2              	15.22%
Bootstrap support for H2XJW9 as seed ortholog is 100%.
Bootstrap support for I3LCI8 as seed ortholog is 100%.

Group of orthologs #4433. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:126

H2XL65              	100.00%		I3LDU4              	100.00%
                    	       		I3L6K2              	6.06%
Bootstrap support for H2XL65 as seed ortholog is 100%.
Bootstrap support for I3LDU4 as seed ortholog is 100%.

Group of orthologs #4434. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:126

F6PZ91              	100.00%		F1RSF7              	100.00%
Bootstrap support for F6PZ91 as seed ortholog is 100%.
Bootstrap support for F1RSF7 as seed ortholog is 100%.

Group of orthologs #4435. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 S.scrofa:24

F6UD77              	100.00%		F1RJE1              	100.00%
Bootstrap support for F6UD77 as seed ortholog is 73%.
Alternative seed ortholog is F6RJ81 (22 bits away from this cluster)
Bootstrap support for F1RJE1 as seed ortholog is 74%.
Alternative seed ortholog is F1SQJ4 (24 bits away from this cluster)

Group of orthologs #4436. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:126

F6SXJ8              	100.00%		F1RW82              	100.00%
Bootstrap support for F6SXJ8 as seed ortholog is 100%.
Bootstrap support for F1RW82 as seed ortholog is 100%.

Group of orthologs #4437. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 S.scrofa:79

F6PKV2              	100.00%		F1SC78              	100.00%
Bootstrap support for F6PKV2 as seed ortholog is 69%.
Alternative seed ortholog is H2Y0Q2 (12 bits away from this cluster)
Bootstrap support for F1SC78 as seed ortholog is 100%.

Group of orthologs #4438. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:126

F7AD14              	100.00%		F1RWN4              	100.00%
Bootstrap support for F7AD14 as seed ortholog is 100%.
Bootstrap support for F1RWN4 as seed ortholog is 100%.

Group of orthologs #4439. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:126

F6PWR0              	100.00%		F2Z5W0              	100.00%
Bootstrap support for F6PWR0 as seed ortholog is 100%.
Bootstrap support for F2Z5W0 as seed ortholog is 100%.

Group of orthologs #4440. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.scrofa:126

H2XQK4              	100.00%		F1RPS6              	100.00%
Bootstrap support for H2XQK4 as seed ortholog is 99%.
Bootstrap support for F1RPS6 as seed ortholog is 100%.

Group of orthologs #4441. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:126

H2XY24              	100.00%		F1RGD1              	100.00%
Bootstrap support for H2XY24 as seed ortholog is 100%.
Bootstrap support for F1RGD1 as seed ortholog is 100%.

Group of orthologs #4442. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:126

F6PIV0              	100.00%		I3LN91              	100.00%
Bootstrap support for F6PIV0 as seed ortholog is 100%.
Bootstrap support for I3LN91 as seed ortholog is 100%.

Group of orthologs #4443. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.scrofa:67

F6THA9              	100.00%		I3LQJ6              	100.00%
Bootstrap support for F6THA9 as seed ortholog is 99%.
Bootstrap support for I3LQJ6 as seed ortholog is 99%.

Group of orthologs #4444. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:126

F6YF30              	100.00%		I3LFN2              	100.00%
Bootstrap support for F6YF30 as seed ortholog is 100%.
Bootstrap support for I3LFN2 as seed ortholog is 100%.

Group of orthologs #4445. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:126

Q8I7D9              	100.00%		F2Z5D9              	100.00%
Bootstrap support for Q8I7D9 as seed ortholog is 100%.
Bootstrap support for F2Z5D9 as seed ortholog is 100%.

Group of orthologs #4446. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 S.scrofa:126

H2XXY6              	100.00%		I3LLD6              	100.00%
Bootstrap support for H2XXY6 as seed ortholog is 100%.
Bootstrap support for I3LLD6 as seed ortholog is 100%.

Group of orthologs #4447. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.scrofa:125

H2XX77              	100.00%		I3LCU9              	100.00%
                    	       		F1SRD7              	33.66%
Bootstrap support for H2XX77 as seed ortholog is 100%.
Bootstrap support for I3LCU9 as seed ortholog is 100%.

Group of orthologs #4448. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.scrofa:125

F6TZN8              	100.00%		F1SE54              	100.00%
Bootstrap support for F6TZN8 as seed ortholog is 100%.
Bootstrap support for F1SE54 as seed ortholog is 100%.

Group of orthologs #4449. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.scrofa:125

H2Y0A6              	100.00%		D7RA34              	100.00%
Bootstrap support for H2Y0A6 as seed ortholog is 100%.
Bootstrap support for D7RA34 as seed ortholog is 100%.

Group of orthologs #4450. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.scrofa:125

H2XLY3              	100.00%		F1S720              	100.00%
Bootstrap support for H2XLY3 as seed ortholog is 100%.
Bootstrap support for F1S720 as seed ortholog is 100%.

Group of orthologs #4451. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.scrofa:125

F6XD32              	100.00%		I3LCN5              	100.00%
Bootstrap support for F6XD32 as seed ortholog is 100%.
Bootstrap support for I3LCN5 as seed ortholog is 100%.

Group of orthologs #4452. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.scrofa:125

F6UBX1              	100.00%		I3LMB7              	100.00%
Bootstrap support for F6UBX1 as seed ortholog is 100%.
Bootstrap support for I3LMB7 as seed ortholog is 100%.

Group of orthologs #4453. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.scrofa:125

H2XX34              	100.00%		I3LCG6              	100.00%
Bootstrap support for H2XX34 as seed ortholog is 100%.
Bootstrap support for I3LCG6 as seed ortholog is 100%.

Group of orthologs #4454. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 S.scrofa:81

H2XW02              	100.00%		I3LGQ4              	100.00%
Bootstrap support for H2XW02 as seed ortholog is 100%.
Bootstrap support for I3LGQ4 as seed ortholog is 99%.

Group of orthologs #4455. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:75

H2Y0G7              	100.00%		F1RMZ3              	100.00%
                    	       		F1SJP8              	11.49%
                    	       		F1SRG0              	11.49%
Bootstrap support for H2Y0G7 as seed ortholog is 100%.
Bootstrap support for F1RMZ3 as seed ortholog is 99%.

Group of orthologs #4456. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:124

F6S6I0              	100.00%		F1SQH0              	100.00%
F6YBG1              	6.14%		
Bootstrap support for F6S6I0 as seed ortholog is 100%.
Bootstrap support for F1SQH0 as seed ortholog is 100%.

Group of orthologs #4457. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:124

H2XT15              	100.00%		F1RGP4              	100.00%
                    	       		F1RZF2              	13.74%
Bootstrap support for H2XT15 as seed ortholog is 100%.
Bootstrap support for F1RGP4 as seed ortholog is 100%.

Group of orthologs #4458. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:124

H2XM94              	100.00%		I3LDJ9              	100.00%
                    	       		F1RJT5              	18.55%
Bootstrap support for H2XM94 as seed ortholog is 100%.
Bootstrap support for I3LDJ9 as seed ortholog is 100%.

Group of orthologs #4459. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 S.scrofa:124

F6PW43              	100.00%		F1SKJ2              	100.00%
Bootstrap support for F6PW43 as seed ortholog is 99%.
Bootstrap support for F1SKJ2 as seed ortholog is 100%.

Group of orthologs #4460. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:124

H2XVT6              	100.00%		A5GHK3              	100.00%
Bootstrap support for H2XVT6 as seed ortholog is 100%.
Bootstrap support for A5GHK3 as seed ortholog is 100%.

Group of orthologs #4461. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:124

H2XKX6              	100.00%		F1RTE0              	100.00%
Bootstrap support for H2XKX6 as seed ortholog is 100%.
Bootstrap support for F1RTE0 as seed ortholog is 100%.

Group of orthologs #4462. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:124

F7ANQ7              	100.00%		F1S956              	100.00%
Bootstrap support for F7ANQ7 as seed ortholog is 100%.
Bootstrap support for F1S956 as seed ortholog is 100%.

Group of orthologs #4463. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.scrofa:124

H2XRD8              	100.00%		F1S2W6              	100.00%
Bootstrap support for H2XRD8 as seed ortholog is 99%.
Bootstrap support for F1S2W6 as seed ortholog is 100%.

Group of orthologs #4464. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:124

H2XQF1              	100.00%		F1S6Z8              	100.00%
Bootstrap support for H2XQF1 as seed ortholog is 100%.
Bootstrap support for F1S6Z8 as seed ortholog is 100%.

Group of orthologs #4465. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:124

H2XX91              	100.00%		F1SAH6              	100.00%
Bootstrap support for H2XX91 as seed ortholog is 100%.
Bootstrap support for F1SAH6 as seed ortholog is 100%.

Group of orthologs #4466. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:124

H2XY09              	100.00%		F1SLC2              	100.00%
Bootstrap support for H2XY09 as seed ortholog is 100%.
Bootstrap support for F1SLC2 as seed ortholog is 100%.

Group of orthologs #4467. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 S.scrofa:74

F7AGK5              	100.00%		Q2EN77              	100.00%
Bootstrap support for F7AGK5 as seed ortholog is 100%.
Bootstrap support for Q2EN77 as seed ortholog is 99%.

Group of orthologs #4468. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:123

F6PYN6              	100.00%		F1RFN0              	100.00%
                    	       		I3LDP4              	54.74%
Bootstrap support for F6PYN6 as seed ortholog is 100%.
Bootstrap support for F1RFN0 as seed ortholog is 100%.

Group of orthologs #4469. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:41

F6QXL1              	100.00%		F1S7T8              	100.00%
Bootstrap support for F6QXL1 as seed ortholog is 100%.
Bootstrap support for F1S7T8 as seed ortholog is 83%.

Group of orthologs #4470. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:123

F6QA01              	100.00%		F1SFT9              	100.00%
Bootstrap support for F6QA01 as seed ortholog is 100%.
Bootstrap support for F1SFT9 as seed ortholog is 100%.

Group of orthologs #4471. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:123

F6XC11              	100.00%		F1SPI0              	100.00%
Bootstrap support for F6XC11 as seed ortholog is 100%.
Bootstrap support for F1SPI0 as seed ortholog is 100%.

Group of orthologs #4472. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:123

H2XMA8              	100.00%		F1S415              	100.00%
Bootstrap support for H2XMA8 as seed ortholog is 100%.
Bootstrap support for F1S415 as seed ortholog is 100%.

Group of orthologs #4473. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:123

F6TJB5              	100.00%		I3LBR4              	100.00%
Bootstrap support for F6TJB5 as seed ortholog is 100%.
Bootstrap support for I3LBR4 as seed ortholog is 100%.

Group of orthologs #4474. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:123

H2XP59              	100.00%		F1SDZ0              	100.00%
Bootstrap support for H2XP59 as seed ortholog is 100%.
Bootstrap support for F1SDZ0 as seed ortholog is 100%.

Group of orthologs #4475. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:43

H2XTL6              	100.00%		F1S7S9              	100.00%
Bootstrap support for H2XTL6 as seed ortholog is 100%.
Bootstrap support for F1S7S9 as seed ortholog is 97%.

Group of orthologs #4476. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:123

F6VY63              	100.00%		I3LNI2              	100.00%
Bootstrap support for F6VY63 as seed ortholog is 100%.
Bootstrap support for I3LNI2 as seed ortholog is 100%.

Group of orthologs #4477. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:51

F6UB61              	100.00%		K7GLE8              	100.00%
Bootstrap support for F6UB61 as seed ortholog is 100%.
Bootstrap support for K7GLE8 as seed ortholog is 84%.

Group of orthologs #4478. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:123

F6T9R1              	100.00%		Q29303              	100.00%
Bootstrap support for F6T9R1 as seed ortholog is 100%.
Bootstrap support for Q29303 as seed ortholog is 100%.

Group of orthologs #4479. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:123

H2XV19              	100.00%		F1SLQ7              	100.00%
Bootstrap support for H2XV19 as seed ortholog is 100%.
Bootstrap support for F1SLQ7 as seed ortholog is 100%.

Group of orthologs #4480. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 S.scrofa:123

H2XLY1              	100.00%		I3LT10              	100.00%
Bootstrap support for H2XLY1 as seed ortholog is 100%.
Bootstrap support for I3LT10 as seed ortholog is 100%.

Group of orthologs #4481. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 S.scrofa:122

F6V542              	100.00%		F1SGX6              	100.00%
                    	       		F1STV5              	34.75%
                    	       		F1RQQ5              	22.34%
Bootstrap support for F6V542 as seed ortholog is 100%.
Bootstrap support for F1SGX6 as seed ortholog is 100%.

Group of orthologs #4482. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 S.scrofa:122

F6QMA7              	100.00%		F1RPU8              	100.00%
H2XPQ4              	16.28%		
Bootstrap support for F6QMA7 as seed ortholog is 99%.
Bootstrap support for F1RPU8 as seed ortholog is 100%.

Group of orthologs #4483. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 S.scrofa:30

F6ZIG5              	100.00%		F1SHP7              	100.00%
                    	       		F1SM72              	31.81%
Bootstrap support for F6ZIG5 as seed ortholog is 85%.
Bootstrap support for F1SHP7 as seed ortholog is 73%.
Alternative seed ortholog is F1RM75 (30 bits away from this cluster)

Group of orthologs #4484. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 S.scrofa:50

Q4H3M8              	100.00%		F1SLF1              	100.00%
                    	       		F1S4Q5              	20.25%
Bootstrap support for Q4H3M8 as seed ortholog is 100%.
Bootstrap support for F1SLF1 as seed ortholog is 97%.

Group of orthologs #4485. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 S.scrofa:122

H2XTS3              	100.00%		F1RNV9              	100.00%
Bootstrap support for H2XTS3 as seed ortholog is 67%.
Alternative seed ortholog is F6U1C4 (13 bits away from this cluster)
Bootstrap support for F1RNV9 as seed ortholog is 100%.

Group of orthologs #4486. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 S.scrofa:80

H2XYK0              	100.00%		F1S8U4              	100.00%
Bootstrap support for H2XYK0 as seed ortholog is 100%.
Bootstrap support for F1S8U4 as seed ortholog is 99%.

Group of orthologs #4487. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 S.scrofa:32

F7B8D7              	100.00%		I3LDN2              	100.00%
Bootstrap support for F7B8D7 as seed ortholog is 63%.
Alternative seed ortholog is F6WXL3 (8 bits away from this cluster)
Bootstrap support for I3LDN2 as seed ortholog is 95%.

Group of orthologs #4488. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 S.scrofa:122

Q8HIN8              	100.00%		Q35915              	100.00%
Bootstrap support for Q8HIN8 as seed ortholog is 100%.
Bootstrap support for Q35915 as seed ortholog is 100%.

Group of orthologs #4489. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.scrofa:121

H2XYG4              	100.00%		F1RWZ9              	100.00%
                    	       		Q864V5              	34.52%
Bootstrap support for H2XYG4 as seed ortholog is 100%.
Bootstrap support for F1RWZ9 as seed ortholog is 100%.

Group of orthologs #4490. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.scrofa:121

F6UI30              	100.00%		I3LQU0              	100.00%
                    	       		F1RRE0              	55.25%
Bootstrap support for F6UI30 as seed ortholog is 100%.
Bootstrap support for I3LQU0 as seed ortholog is 100%.

Group of orthologs #4491. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.scrofa:121

F6YNB1              	100.00%		F1RUE0              	100.00%
Bootstrap support for F6YNB1 as seed ortholog is 100%.
Bootstrap support for F1RUE0 as seed ortholog is 100%.

Group of orthologs #4492. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.scrofa:121

F6T052              	100.00%		F1SDM6              	100.00%
Bootstrap support for F6T052 as seed ortholog is 100%.
Bootstrap support for F1SDM6 as seed ortholog is 100%.

Group of orthologs #4493. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.scrofa:121

F7B4L8              	100.00%		F1RPE9              	100.00%
Bootstrap support for F7B4L8 as seed ortholog is 100%.
Bootstrap support for F1RPE9 as seed ortholog is 100%.

Group of orthologs #4494. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.scrofa:121

F6TGC0              	100.00%		F1SVB7              	100.00%
Bootstrap support for F6TGC0 as seed ortholog is 100%.
Bootstrap support for F1SVB7 as seed ortholog is 100%.

Group of orthologs #4495. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.scrofa:121

F6UTH5              	100.00%		I3L7D5              	100.00%
Bootstrap support for F6UTH5 as seed ortholog is 100%.
Bootstrap support for I3L7D5 as seed ortholog is 100%.

Group of orthologs #4496. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.scrofa:121

H2XTD8              	100.00%		F1SA28              	100.00%
Bootstrap support for H2XTD8 as seed ortholog is 100%.
Bootstrap support for F1SA28 as seed ortholog is 100%.

Group of orthologs #4497. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 S.scrofa:121

H2XYR7              	100.00%		F1SGP6              	100.00%
Bootstrap support for H2XYR7 as seed ortholog is 93%.
Bootstrap support for F1SGP6 as seed ortholog is 100%.

Group of orthologs #4498. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 S.scrofa:121

H2XMW2              	100.00%		I3LPF5              	100.00%
Bootstrap support for H2XMW2 as seed ortholog is 100%.
Bootstrap support for I3LPF5 as seed ortholog is 100%.

Group of orthologs #4499. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 S.scrofa:120

H2XN17              	100.00%		F1SU45              	100.00%
H2Y271              	6.27%		
F6PMP3              	5.50%		
Bootstrap support for H2XN17 as seed ortholog is 100%.
Bootstrap support for F1SU45 as seed ortholog is 100%.

Group of orthologs #4500. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 S.scrofa:120

F6VPV7              	100.00%		F1SEI9              	100.00%
                    	       		I3LJ39              	98.09%
Bootstrap support for F6VPV7 as seed ortholog is 100%.
Bootstrap support for F1SEI9 as seed ortholog is 100%.

Group of orthologs #4501. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 S.scrofa:120

F6QHZ5              	100.00%		F1RXF2              	100.00%
Bootstrap support for F6QHZ5 as seed ortholog is 100%.
Bootstrap support for F1RXF2 as seed ortholog is 100%.

Group of orthologs #4502. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 S.scrofa:120

H2XL09              	100.00%		F1S2Z9              	100.00%
Bootstrap support for H2XL09 as seed ortholog is 100%.
Bootstrap support for F1S2Z9 as seed ortholog is 100%.

Group of orthologs #4503. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 S.scrofa:120

H2XLM2              	100.00%		F1S2U8              	100.00%
Bootstrap support for H2XLM2 as seed ortholog is 100%.
Bootstrap support for F1S2U8 as seed ortholog is 100%.

Group of orthologs #4504. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 S.scrofa:120

F6YCH9              	100.00%		I3LFU4              	100.00%
Bootstrap support for F6YCH9 as seed ortholog is 100%.
Bootstrap support for I3LFU4 as seed ortholog is 100%.

Group of orthologs #4505. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:119

F6W5A6              	100.00%		F1RM63              	100.00%
                    	       		I3LDH8              	74.74%
Bootstrap support for F6W5A6 as seed ortholog is 100%.
Bootstrap support for F1RM63 as seed ortholog is 100%.

Group of orthologs #4506. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:119

H2XRV7              	100.00%		E2IUK4              	100.00%
                    	       		F1RFE9              	100.00%
Bootstrap support for H2XRV7 as seed ortholog is 100%.
Bootstrap support for E2IUK4 as seed ortholog is 100%.
Bootstrap support for F1RFE9 as seed ortholog is 100%.

Group of orthologs #4507. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:119

F6W5E5              	100.00%		I3LQL8              	100.00%
                    	       		I3LI68              	15.54%
Bootstrap support for F6W5E5 as seed ortholog is 100%.
Bootstrap support for I3LQL8 as seed ortholog is 100%.

Group of orthologs #4508. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:119

F6TQZ3              	100.00%		F1RS33              	100.00%
Bootstrap support for F6TQZ3 as seed ortholog is 100%.
Bootstrap support for F1RS33 as seed ortholog is 100%.

Group of orthologs #4509. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:119

F6YGF8              	100.00%		F1S1T6              	100.00%
Bootstrap support for F6YGF8 as seed ortholog is 100%.
Bootstrap support for F1S1T6 as seed ortholog is 100%.

Group of orthologs #4510. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:119

F6YE29              	100.00%		F1SFB7              	100.00%
Bootstrap support for F6YE29 as seed ortholog is 100%.
Bootstrap support for F1SFB7 as seed ortholog is 100%.

Group of orthologs #4511. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:119

F6XYG2              	100.00%		F1SLR1              	100.00%
Bootstrap support for F6XYG2 as seed ortholog is 100%.
Bootstrap support for F1SLR1 as seed ortholog is 100%.

Group of orthologs #4512. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:119

F7AN54              	100.00%		F1SDC9              	100.00%
Bootstrap support for F7AN54 as seed ortholog is 100%.
Bootstrap support for F1SDC9 as seed ortholog is 100%.

Group of orthologs #4513. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:119

H2XZQ9              	100.00%		F1RMY3              	100.00%
Bootstrap support for H2XZQ9 as seed ortholog is 100%.
Bootstrap support for F1RMY3 as seed ortholog is 100%.

Group of orthologs #4514. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:119

H2XKV9              	100.00%		F1SDK3              	100.00%
Bootstrap support for H2XKV9 as seed ortholog is 100%.
Bootstrap support for F1SDK3 as seed ortholog is 100%.

Group of orthologs #4515. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:119

F6ZED0              	100.00%		I3L5D0              	100.00%
Bootstrap support for F6ZED0 as seed ortholog is 100%.
Bootstrap support for I3L5D0 as seed ortholog is 100%.

Group of orthologs #4516. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:119

F7AAT5              	100.00%		F1SVC5              	100.00%
Bootstrap support for F7AAT5 as seed ortholog is 100%.
Bootstrap support for F1SVC5 as seed ortholog is 100%.

Group of orthologs #4517. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 S.scrofa:50

H2XRR2              	100.00%		F1SJ91              	100.00%
Bootstrap support for H2XRR2 as seed ortholog is 80%.
Bootstrap support for F1SJ91 as seed ortholog is 93%.

Group of orthologs #4518. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:119

F6ZM16              	100.00%		I3LPD1              	100.00%
Bootstrap support for F6ZM16 as seed ortholog is 100%.
Bootstrap support for I3LPD1 as seed ortholog is 100%.

Group of orthologs #4519. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 S.scrofa:119

F7AVR8              	100.00%		I3LNY1              	100.00%
Bootstrap support for F7AVR8 as seed ortholog is 100%.
Bootstrap support for I3LNY1 as seed ortholog is 100%.

Group of orthologs #4520. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

Q9NDP3              	100.00%		F1SLC7              	100.00%
                    	       		F1S8Q7              	22.01%
                    	       		I3LDS9              	20.75%
                    	       		F1S3C4              	12.26%
Bootstrap support for Q9NDP3 as seed ortholog is 100%.
Bootstrap support for F1SLC7 as seed ortholog is 100%.

Group of orthologs #4521. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:32

F6V8N0              	100.00%		F1RZS1              	100.00%
H2Y092              	12.10%		
Bootstrap support for F6V8N0 as seed ortholog is 100%.
Bootstrap support for F1RZS1 as seed ortholog is 71%.
Alternative seed ortholog is F1SGL4 (32 bits away from this cluster)

Group of orthologs #4522. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

F6WJJ1              	100.00%		F1S1D2              	100.00%
                    	       		I3L9R7              	37.98%
Bootstrap support for F6WJJ1 as seed ortholog is 100%.
Bootstrap support for F1S1D2 as seed ortholog is 100%.

Group of orthologs #4523. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

F6ZS78              	100.00%		F1RYQ1              	100.00%
                    	       		F1SPB4              	37.79%
Bootstrap support for F6ZS78 as seed ortholog is 100%.
Bootstrap support for F1RYQ1 as seed ortholog is 100%.

Group of orthologs #4524. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:42

F6ZJ12              	100.00%		F1S688              	100.00%
                    	       		I3L5E6              	76.61%
Bootstrap support for F6ZJ12 as seed ortholog is 100%.
Bootstrap support for F1S688 as seed ortholog is 96%.

Group of orthologs #4525. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

F6TA62              	100.00%		I3L9A7              	100.00%
                    	       		F1RZQ5              	51.68%
Bootstrap support for F6TA62 as seed ortholog is 100%.
Bootstrap support for I3L9A7 as seed ortholog is 100%.

Group of orthologs #4526. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

F6TBF1              	100.00%		F1RTW4              	100.00%
Bootstrap support for F6TBF1 as seed ortholog is 100%.
Bootstrap support for F1RTW4 as seed ortholog is 100%.

Group of orthologs #4527. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

F6VD64              	100.00%		F1RQV0              	100.00%
Bootstrap support for F6VD64 as seed ortholog is 100%.
Bootstrap support for F1RQV0 as seed ortholog is 100%.

Group of orthologs #4528. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

F7A3X7              	100.00%		F1RWL7              	100.00%
Bootstrap support for F7A3X7 as seed ortholog is 100%.
Bootstrap support for F1RWL7 as seed ortholog is 100%.

Group of orthologs #4529. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

F7B6D7              	100.00%		F1RV39              	100.00%
Bootstrap support for F7B6D7 as seed ortholog is 100%.
Bootstrap support for F1RV39 as seed ortholog is 100%.

Group of orthologs #4530. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

F6UAV0              	100.00%		F1SSD4              	100.00%
Bootstrap support for F6UAV0 as seed ortholog is 100%.
Bootstrap support for F1SSD4 as seed ortholog is 100%.

Group of orthologs #4531. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

F6YWH4              	100.00%		F1SLY2              	100.00%
Bootstrap support for F6YWH4 as seed ortholog is 100%.
Bootstrap support for F1SLY2 as seed ortholog is 100%.

Group of orthologs #4532. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:70

H2Y1Z7              	100.00%		F1RNY1              	100.00%
Bootstrap support for H2Y1Z7 as seed ortholog is 100%.
Bootstrap support for F1RNY1 as seed ortholog is 99%.

Group of orthologs #4533. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

H2XY20              	100.00%		F1S7D0              	100.00%
Bootstrap support for H2XY20 as seed ortholog is 100%.
Bootstrap support for F1S7D0 as seed ortholog is 100%.

Group of orthologs #4534. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

H2XWJ8              	100.00%		F1SAB6              	100.00%
Bootstrap support for H2XWJ8 as seed ortholog is 100%.
Bootstrap support for F1SAB6 as seed ortholog is 100%.

Group of orthologs #4535. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

F6ZIL3              	100.00%		I3LBM0              	100.00%
Bootstrap support for F6ZIL3 as seed ortholog is 100%.
Bootstrap support for I3LBM0 as seed ortholog is 100%.

Group of orthologs #4536. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

H2XRU3              	100.00%		F2Z5S5              	100.00%
Bootstrap support for H2XRU3 as seed ortholog is 100%.
Bootstrap support for F2Z5S5 as seed ortholog is 100%.

Group of orthologs #4537. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

H2XYU8              	100.00%		F1SUB1              	100.00%
Bootstrap support for H2XYU8 as seed ortholog is 100%.
Bootstrap support for F1SUB1 as seed ortholog is 100%.

Group of orthologs #4538. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

H2Y1B5              	100.00%		F2Z568              	100.00%
Bootstrap support for H2Y1B5 as seed ortholog is 100%.
Bootstrap support for F2Z568 as seed ortholog is 100%.

Group of orthologs #4539. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 S.scrofa:118

H2XWH6              	100.00%		I3LGD8              	100.00%
Bootstrap support for H2XWH6 as seed ortholog is 100%.
Bootstrap support for I3LGD8 as seed ortholog is 100%.

Group of orthologs #4540. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 S.scrofa:117

F6Q7R7              	100.00%		F1SCY5              	100.00%
                    	       		Q4G1G8              	100.00%
Bootstrap support for F6Q7R7 as seed ortholog is 93%.
Bootstrap support for F1SCY5 as seed ortholog is 100%.
Bootstrap support for Q4G1G8 as seed ortholog is 100%.

Group of orthologs #4541. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.scrofa:117

F6YIH8              	100.00%		I3LEU5              	100.00%
                    	       		F1S8R7              	55.22%
Bootstrap support for F6YIH8 as seed ortholog is 100%.
Bootstrap support for I3LEU5 as seed ortholog is 100%.

Group of orthologs #4542. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.scrofa:117

F6RDF3              	100.00%		F1RXC8              	100.00%
Bootstrap support for F6RDF3 as seed ortholog is 100%.
Bootstrap support for F1RXC8 as seed ortholog is 100%.

Group of orthologs #4543. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.scrofa:117

H2XJK8              	100.00%		F1RFR7              	100.00%
Bootstrap support for H2XJK8 as seed ortholog is 100%.
Bootstrap support for F1RFR7 as seed ortholog is 100%.

Group of orthologs #4544. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.scrofa:117

F6RW32              	100.00%		F1SPJ5              	100.00%
Bootstrap support for F6RW32 as seed ortholog is 100%.
Bootstrap support for F1SPJ5 as seed ortholog is 100%.

Group of orthologs #4545. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.scrofa:117

F6ZR87              	100.00%		F1S730              	100.00%
Bootstrap support for F6ZR87 as seed ortholog is 100%.
Bootstrap support for F1S730 as seed ortholog is 100%.

Group of orthologs #4546. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.scrofa:117

F6ZER2              	100.00%		K7GPY3              	100.00%
Bootstrap support for F6ZER2 as seed ortholog is 100%.
Bootstrap support for K7GPY3 as seed ortholog is 100%.

Group of orthologs #4547. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 S.scrofa:117

H2XM57              	100.00%		I3LKZ3              	100.00%
Bootstrap support for H2XM57 as seed ortholog is 100%.
Bootstrap support for I3LKZ3 as seed ortholog is 100%.

Group of orthologs #4548. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 S.scrofa:116

F6QD58              	100.00%		F1SU75              	100.00%
F6ZAF3              	62.87%		
F6WIL0              	6.25%		
Bootstrap support for F6QD58 as seed ortholog is 72%.
Alternative seed ortholog is F6SPA0 (10 bits away from this cluster)
Bootstrap support for F1SU75 as seed ortholog is 100%.

Group of orthologs #4549. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.scrofa:116

F7ARW8              	100.00%		F1STL0              	100.00%
                    	       		I3LDX8              	12.05%
Bootstrap support for F7ARW8 as seed ortholog is 100%.
Bootstrap support for F1STL0 as seed ortholog is 100%.

Group of orthologs #4550. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.scrofa:116

F6WNX6              	100.00%		F1RQX4              	100.00%
Bootstrap support for F6WNX6 as seed ortholog is 100%.
Bootstrap support for F1RQX4 as seed ortholog is 100%.

Group of orthologs #4551. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.scrofa:116

F7ARN8              	100.00%		F1RKQ9              	100.00%
Bootstrap support for F7ARN8 as seed ortholog is 100%.
Bootstrap support for F1RKQ9 as seed ortholog is 100%.

Group of orthologs #4552. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.scrofa:116

F6W310              	100.00%		F1SU70              	100.00%
Bootstrap support for F6W310 as seed ortholog is 100%.
Bootstrap support for F1SU70 as seed ortholog is 100%.

Group of orthologs #4553. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 S.scrofa:116

F6QVB5              	100.00%		I3LL77              	100.00%
Bootstrap support for F6QVB5 as seed ortholog is 100%.
Bootstrap support for I3LL77 as seed ortholog is 100%.

Group of orthologs #4554. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:63

F7B236              	100.00%		F1STD0              	100.00%
Bootstrap support for F7B236 as seed ortholog is 99%.
Bootstrap support for F1STD0 as seed ortholog is 99%.

Group of orthologs #4555. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.scrofa:115

F6WP45              	100.00%		I3L5U6              	100.00%
F6XA49              	78.80%		I3LFA0              	37.06%
                    	       		F1SPS2              	6.74%
Bootstrap support for F6WP45 as seed ortholog is 100%.
Bootstrap support for I3L5U6 as seed ortholog is 100%.

Group of orthologs #4556. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.scrofa:71

F6WTV6              	100.00%		F1RKS7              	100.00%
                    	       		D2D0E5              	59.10%
                    	       		K7N7E5              	57.65%
Bootstrap support for F6WTV6 as seed ortholog is 100%.
Bootstrap support for F1RKS7 as seed ortholog is 95%.

Group of orthologs #4557. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.scrofa:115

F6Z2L4              	100.00%		F1REY0              	100.00%
                    	       		F1RIA5              	14.13%
Bootstrap support for F6Z2L4 as seed ortholog is 100%.
Bootstrap support for F1REY0 as seed ortholog is 100%.

Group of orthologs #4558. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 S.scrofa:115

F6TZY2              	100.00%		F1S667              	100.00%
F6TZQ2              	86.86%		
Bootstrap support for F6TZY2 as seed ortholog is 67%.
Alternative seed ortholog is F6XEC9 (10 bits away from this cluster)
Bootstrap support for F1S667 as seed ortholog is 100%.

Group of orthologs #4559. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.scrofa:115

F6SQN7              	100.00%		F1SAL5              	100.00%
                    	       		I3L5T0              	35.86%
Bootstrap support for F6SQN7 as seed ortholog is 100%.
Bootstrap support for F1SAL5 as seed ortholog is 100%.

Group of orthologs #4560. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.scrofa:115

F6V341              	100.00%		F1SCI3              	100.00%
                    	       		I3LSZ9              	62.46%
Bootstrap support for F6V341 as seed ortholog is 100%.
Bootstrap support for F1SCI3 as seed ortholog is 100%.

Group of orthologs #4561. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.scrofa:115

F6QH68              	100.00%		F1SEX0              	100.00%
Bootstrap support for F6QH68 as seed ortholog is 100%.
Bootstrap support for F1SEX0 as seed ortholog is 100%.

Group of orthologs #4562. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.scrofa:115

F7A4V3              	100.00%		I3LUG6              	100.00%
Bootstrap support for F7A4V3 as seed ortholog is 100%.
Bootstrap support for I3LUG6 as seed ortholog is 100%.

Group of orthologs #4563. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 S.scrofa:115

H2XVB4              	100.00%		I3LEH0              	100.00%
Bootstrap support for H2XVB4 as seed ortholog is 100%.
Bootstrap support for I3LEH0 as seed ortholog is 100%.

Group of orthologs #4564. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.scrofa:20

F6WH63              	100.00%		F1S6C7              	100.00%
                    	       		B2ZI35              	8.95%
                    	       		I3LQW2              	7.43%
Bootstrap support for F6WH63 as seed ortholog is 95%.
Bootstrap support for F1S6C7 as seed ortholog is 74%.
Alternative seed ortholog is I3LB83 (20 bits away from this cluster)

Group of orthologs #4565. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.scrofa:27

F6WCG9              	100.00%		F1RVE6              	100.00%
                    	       		I3LB28              	34.41%
Bootstrap support for F6WCG9 as seed ortholog is 100%.
Bootstrap support for F1RVE6 as seed ortholog is 69%.
Alternative seed ortholog is I3L833 (27 bits away from this cluster)

Group of orthologs #4566. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.scrofa:30

F6ZA49              	100.00%		F1RK69              	100.00%
H2Y0K0              	11.03%		
Bootstrap support for F6ZA49 as seed ortholog is 100%.
Bootstrap support for F1RK69 as seed ortholog is 86%.

Group of orthologs #4567. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.scrofa:114

F6SSA8              	100.00%		B2KL28              	100.00%
Bootstrap support for F6SSA8 as seed ortholog is 100%.
Bootstrap support for B2KL28 as seed ortholog is 100%.

Group of orthologs #4568. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.scrofa:54

F6VUI1              	100.00%		F1RID6              	100.00%
Bootstrap support for F6VUI1 as seed ortholog is 100%.
Bootstrap support for F1RID6 as seed ortholog is 96%.

Group of orthologs #4569. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.scrofa:114

F6SET0              	100.00%		F1RVH4              	100.00%
Bootstrap support for F6SET0 as seed ortholog is 100%.
Bootstrap support for F1RVH4 as seed ortholog is 100%.

Group of orthologs #4570. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 S.scrofa:114

F7ADT8              	100.00%		F1S1M6              	100.00%
Bootstrap support for F7ADT8 as seed ortholog is 76%.
Bootstrap support for F1S1M6 as seed ortholog is 100%.

Group of orthologs #4571. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.scrofa:9

H2XWL2              	100.00%		F1RKQ7              	100.00%
Bootstrap support for H2XWL2 as seed ortholog is 100%.
Bootstrap support for F1RKQ7 as seed ortholog is 53%.
Alternative seed ortholog is F1RYY4 (9 bits away from this cluster)

Group of orthologs #4572. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.scrofa:114

H2XM31              	100.00%		F1SDJ4              	100.00%
Bootstrap support for H2XM31 as seed ortholog is 100%.
Bootstrap support for F1SDJ4 as seed ortholog is 100%.

Group of orthologs #4573. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.scrofa:13

Q4H3E8              	100.00%		F1SCC4              	100.00%
Bootstrap support for Q4H3E8 as seed ortholog is 100%.
Bootstrap support for F1SCC4 as seed ortholog is 85%.

Group of orthologs #4574. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.scrofa:114

F7AK80              	100.00%		I3LR24              	100.00%
Bootstrap support for F7AK80 as seed ortholog is 100%.
Bootstrap support for I3LR24 as seed ortholog is 100%.

Group of orthologs #4575. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 S.scrofa:63

H2XZI3              	100.00%		I3LKP2              	100.00%
Bootstrap support for H2XZI3 as seed ortholog is 100%.
Bootstrap support for I3LKP2 as seed ortholog is 99%.

Group of orthologs #4576. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.scrofa:113

H2XMS0              	100.00%		F1RRJ1              	100.00%
                    	       		F1RRL4              	77.71%
Bootstrap support for H2XMS0 as seed ortholog is 100%.
Bootstrap support for F1RRJ1 as seed ortholog is 100%.

Group of orthologs #4577. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.scrofa:113

F6XU26              	100.00%		F1RFF2              	100.00%
Bootstrap support for F6XU26 as seed ortholog is 100%.
Bootstrap support for F1RFF2 as seed ortholog is 100%.

Group of orthologs #4578. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.scrofa:113

F6YL99              	100.00%		A5GFM8              	100.00%
Bootstrap support for F6YL99 as seed ortholog is 100%.
Bootstrap support for A5GFM8 as seed ortholog is 100%.

Group of orthologs #4579. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:113

F6SIG7              	100.00%		F1S430              	100.00%
Bootstrap support for F6SIG7 as seed ortholog is 95%.
Bootstrap support for F1S430 as seed ortholog is 100%.

Group of orthologs #4580. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.scrofa:113

F6TAY9              	100.00%		F1S972              	100.00%
Bootstrap support for F6TAY9 as seed ortholog is 100%.
Bootstrap support for F1S972 as seed ortholog is 100%.

Group of orthologs #4581. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.scrofa:113

H2XJX3              	100.00%		F1RLE2              	100.00%
Bootstrap support for H2XJX3 as seed ortholog is 100%.
Bootstrap support for F1RLE2 as seed ortholog is 100%.

Group of orthologs #4582. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.scrofa:113

F6QK29              	100.00%		F1ST79              	100.00%
Bootstrap support for F6QK29 as seed ortholog is 100%.
Bootstrap support for F1ST79 as seed ortholog is 100%.

Group of orthologs #4583. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.scrofa:113

F6Z0L2              	100.00%		F1S398              	100.00%
Bootstrap support for F6Z0L2 as seed ortholog is 100%.
Bootstrap support for F1S398 as seed ortholog is 100%.

Group of orthologs #4584. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.scrofa:113

F7BGS1              	100.00%		F1SA25              	100.00%
Bootstrap support for F7BGS1 as seed ortholog is 100%.
Bootstrap support for F1SA25 as seed ortholog is 100%.

Group of orthologs #4585. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.scrofa:113

H2XTS0              	100.00%		F1S9X7              	100.00%
Bootstrap support for H2XTS0 as seed ortholog is 100%.
Bootstrap support for F1S9X7 as seed ortholog is 100%.

Group of orthologs #4586. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 S.scrofa:113

F6YMZ5              	100.00%		Q6QAT1              	100.00%
Bootstrap support for F6YMZ5 as seed ortholog is 100%.
Bootstrap support for Q6QAT1 as seed ortholog is 100%.

Group of orthologs #4587. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:49

F6SZH9              	100.00%		I3LDG3              	100.00%
                    	       		F1SQU6              	44.30%
                    	       		F1RYV8              	18.63%
                    	       		K7GRT0              	14.83%
Bootstrap support for F6SZH9 as seed ortholog is 82%.
Bootstrap support for I3LDG3 as seed ortholog is 92%.

Group of orthologs #4588. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.scrofa:112

F6PZ36              	100.00%		Q1A730              	100.00%
                    	       		I3LQB4              	47.74%
Bootstrap support for F6PZ36 as seed ortholog is 100%.
Bootstrap support for Q1A730 as seed ortholog is 100%.

Group of orthologs #4589. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.scrofa:112

F6SPC1              	100.00%		P24853              	100.00%
                    	       		Q75ZP3              	7.68%
Bootstrap support for F6SPC1 as seed ortholog is 100%.
Bootstrap support for P24853 as seed ortholog is 100%.

Group of orthologs #4590. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.scrofa:112

F6RSR2              	100.00%		F1RQW5              	100.00%
Bootstrap support for F6RSR2 as seed ortholog is 100%.
Bootstrap support for F1RQW5 as seed ortholog is 100%.

Group of orthologs #4591. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.scrofa:112

F6Q678              	100.00%		F1RWM7              	100.00%
Bootstrap support for F6Q678 as seed ortholog is 100%.
Bootstrap support for F1RWM7 as seed ortholog is 100%.

Group of orthologs #4592. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 S.scrofa:34

H2XNP6              	100.00%		F1SKJ7              	100.00%
Bootstrap support for H2XNP6 as seed ortholog is 93%.
Bootstrap support for F1SKJ7 as seed ortholog is 91%.

Group of orthologs #4593. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.scrofa:15

H2XKN7              	100.00%		F1SUC8              	100.00%
Bootstrap support for H2XKN7 as seed ortholog is 100%.
Bootstrap support for F1SUC8 as seed ortholog is 74%.
Alternative seed ortholog is I3LLK9 (15 bits away from this cluster)

Group of orthologs #4594. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 S.scrofa:112

H2Y0Z1              	100.00%		F1S8G0              	100.00%
Bootstrap support for H2Y0Z1 as seed ortholog is 100%.
Bootstrap support for F1S8G0 as seed ortholog is 100%.

Group of orthologs #4595. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:112

H2XU50              	100.00%		F1SLQ8              	100.00%
Bootstrap support for H2XU50 as seed ortholog is 99%.
Bootstrap support for F1SLQ8 as seed ortholog is 100%.

Group of orthologs #4596. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 S.scrofa:23

H2XPR0              	100.00%		F1RY45              	100.00%
                    	       		I3L5J7              	29.07%
                    	       		I3L820              	27.22%
                    	       		F1SES8              	26.60%
Bootstrap support for H2XPR0 as seed ortholog is 59%.
Alternative seed ortholog is F6Q349 (8 bits away from this cluster)
Bootstrap support for F1RY45 as seed ortholog is 76%.

Group of orthologs #4597. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:45

H2Y0X6              	100.00%		F1RPA3              	100.00%
                    	       		I3LKL3              	16.11%
                    	       		I3LN87              	12.77%
                    	       		I3LFN3              	8.71%
Bootstrap support for H2Y0X6 as seed ortholog is 100%.
Bootstrap support for F1RPA3 as seed ortholog is 87%.

Group of orthologs #4598. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:39

Q4H3C6              	100.00%		F1SHT1              	100.00%
                    	       		F1RZF9              	36.79%
                    	       		F1RWG6              	36.31%
Bootstrap support for Q4H3C6 as seed ortholog is 100%.
Bootstrap support for F1SHT1 as seed ortholog is 94%.

Group of orthologs #4599. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:111

Q4H3R0              	100.00%		F2Z5T1              	100.00%
                    	       		F1S9G0              	20.00%
Bootstrap support for Q4H3R0 as seed ortholog is 100%.
Bootstrap support for F2Z5T1 as seed ortholog is 100%.

Group of orthologs #4600. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 S.scrofa:111

H2Y170              	100.00%		K7GRE3              	100.00%
                    	       		F1SUP9              	18.81%
Bootstrap support for H2Y170 as seed ortholog is 57%.
Alternative seed ortholog is F6ZWC8 (15 bits away from this cluster)
Bootstrap support for K7GRE3 as seed ortholog is 100%.

Group of orthologs #4601. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:111

F6RG08              	100.00%		F1RWM9              	100.00%
Bootstrap support for F6RG08 as seed ortholog is 100%.
Bootstrap support for F1RWM9 as seed ortholog is 100%.

Group of orthologs #4602. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:111

F6YN50              	100.00%		F1RN07              	100.00%
Bootstrap support for F6YN50 as seed ortholog is 100%.
Bootstrap support for F1RN07 as seed ortholog is 100%.

Group of orthologs #4603. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:111

F6TBA1              	100.00%		F1SM07              	100.00%
Bootstrap support for F6TBA1 as seed ortholog is 100%.
Bootstrap support for F1SM07 as seed ortholog is 100%.

Group of orthologs #4604. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:111

F6X709              	100.00%		F1SMC9              	100.00%
Bootstrap support for F6X709 as seed ortholog is 100%.
Bootstrap support for F1SMC9 as seed ortholog is 100%.

Group of orthologs #4605. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:111

F7AIJ0              	100.00%		F1SJJ4              	100.00%
Bootstrap support for F7AIJ0 as seed ortholog is 100%.
Bootstrap support for F1SJJ4 as seed ortholog is 100%.

Group of orthologs #4606. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:111

H2XTZ3              	100.00%		F1SH17              	100.00%
Bootstrap support for H2XTZ3 as seed ortholog is 100%.
Bootstrap support for F1SH17 as seed ortholog is 100%.

Group of orthologs #4607. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:111

F6UFU8              	100.00%		I3LRZ7              	100.00%
Bootstrap support for F6UFU8 as seed ortholog is 100%.
Bootstrap support for I3LRZ7 as seed ortholog is 100%.

Group of orthologs #4608. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:111

H2XJJ6              	100.00%		F2Z5P0              	100.00%
Bootstrap support for H2XJJ6 as seed ortholog is 100%.
Bootstrap support for F2Z5P0 as seed ortholog is 100%.

Group of orthologs #4609. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:111

H2XML9              	100.00%		I3L9N8              	100.00%
Bootstrap support for H2XML9 as seed ortholog is 100%.
Bootstrap support for I3L9N8 as seed ortholog is 100%.

Group of orthologs #4610. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:111

H2XWM9              	100.00%		F1SQP9              	100.00%
Bootstrap support for H2XWM9 as seed ortholog is 100%.
Bootstrap support for F1SQP9 as seed ortholog is 100%.

Group of orthologs #4611. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:111

H2XKE1              	100.00%		I3LQB7              	100.00%
Bootstrap support for H2XKE1 as seed ortholog is 100%.
Bootstrap support for I3LQB7 as seed ortholog is 100%.

Group of orthologs #4612. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 S.scrofa:111

H2XQD0              	100.00%		I3LSQ3              	100.00%
Bootstrap support for H2XQD0 as seed ortholog is 100%.
Bootstrap support for I3LSQ3 as seed ortholog is 100%.

Group of orthologs #4613. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 S.scrofa:68

F6PQM2              	100.00%		F1SKH6              	100.00%
                    	       		I3LTF9              	84.38%
                    	       		O13010              	52.64%
                    	       		I3LFS7              	51.89%
Bootstrap support for F6PQM2 as seed ortholog is 100%.
Bootstrap support for F1SKH6 as seed ortholog is 99%.

Group of orthologs #4614. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 S.scrofa:110

H2XN37              	100.00%		F1RQC3              	100.00%
                    	       		I3LU53              	23.19%
Bootstrap support for H2XN37 as seed ortholog is 100%.
Bootstrap support for F1RQC3 as seed ortholog is 100%.

Group of orthologs #4615. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 S.scrofa:110

H2XN89              	100.00%		B8Y649              	100.00%
Bootstrap support for H2XN89 as seed ortholog is 100%.
Bootstrap support for B8Y649 as seed ortholog is 100%.

Group of orthologs #4616. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 S.scrofa:110

F6UXQ4              	100.00%		I3LDN0              	100.00%
Bootstrap support for F6UXQ4 as seed ortholog is 100%.
Bootstrap support for I3LDN0 as seed ortholog is 100%.

Group of orthologs #4617. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 S.scrofa:110

F6TJY9              	100.00%		P63221              	100.00%
Bootstrap support for F6TJY9 as seed ortholog is 100%.
Bootstrap support for P63221 as seed ortholog is 100%.

Group of orthologs #4618. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:109

H2XNB9              	100.00%		F1S8A9              	100.00%
                    	       		F1RMZ7              	16.28%
                    	       		F1S3E1              	6.91%
                    	       		I3LT94              	5.51%
Bootstrap support for H2XNB9 as seed ortholog is 100%.
Bootstrap support for F1S8A9 as seed ortholog is 100%.

Group of orthologs #4619. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:8

F6QBI4              	100.00%		F1RH73              	100.00%
                    	       		A1XSY8              	18.19%
                    	       		F1RMA1              	18.19%
Bootstrap support for F6QBI4 as seed ortholog is 100%.
Bootstrap support for F1RH73 as seed ortholog is 62%.
Alternative seed ortholog is B4YSE3 (8 bits away from this cluster)

Group of orthologs #4620. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:33

H2XKE5              	100.00%		F1RFU8              	100.00%
H2XPX8              	35.62%		
Bootstrap support for H2XKE5 as seed ortholog is 100%.
Bootstrap support for F1RFU8 as seed ortholog is 81%.

Group of orthologs #4621. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:109

F7AT24              	100.00%		F1S7X6              	100.00%
                    	       		F1RSG7              	43.30%
Bootstrap support for F7AT24 as seed ortholog is 94%.
Bootstrap support for F1S7X6 as seed ortholog is 100%.

Group of orthologs #4622. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:109

F6SVR6              	100.00%		I3LR70              	100.00%
                    	       		I3LFF5              	60.45%
Bootstrap support for F6SVR6 as seed ortholog is 100%.
Bootstrap support for I3LR70 as seed ortholog is 100%.

Group of orthologs #4623. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.scrofa:64

F7BEX9              	100.00%		K7GS96              	100.00%
                    	       		K7GQY0              	42.14%
Bootstrap support for F7BEX9 as seed ortholog is 97%.
Bootstrap support for K7GS96 as seed ortholog is 95%.

Group of orthologs #4624. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:109

F6W5B3              	100.00%		F1RKU6              	100.00%
Bootstrap support for F6W5B3 as seed ortholog is 100%.
Bootstrap support for F1RKU6 as seed ortholog is 100%.

Group of orthologs #4625. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:109

F6RB50              	100.00%		F1S445              	100.00%
Bootstrap support for F6RB50 as seed ortholog is 100%.
Bootstrap support for F1S445 as seed ortholog is 100%.

Group of orthologs #4626. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:109

F6ZNU2              	100.00%		D5K8A3              	100.00%
Bootstrap support for F6ZNU2 as seed ortholog is 100%.
Bootstrap support for D5K8A3 as seed ortholog is 100%.

Group of orthologs #4627. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 S.scrofa:50

F6YVN3              	100.00%		F1RIQ4              	100.00%
Bootstrap support for F6YVN3 as seed ortholog is 98%.
Bootstrap support for F1RIQ4 as seed ortholog is 97%.

Group of orthologs #4628. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:109

F6QS01              	100.00%		F1SBW5              	100.00%
Bootstrap support for F6QS01 as seed ortholog is 100%.
Bootstrap support for F1SBW5 as seed ortholog is 100%.

Group of orthologs #4629. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:50

F6XEJ6              	100.00%		F1RXY7              	100.00%
Bootstrap support for F6XEJ6 as seed ortholog is 100%.
Bootstrap support for F1RXY7 as seed ortholog is 95%.

Group of orthologs #4630. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:109

F6U075              	100.00%		F1SI35              	100.00%
Bootstrap support for F6U075 as seed ortholog is 100%.
Bootstrap support for F1SI35 as seed ortholog is 100%.

Group of orthologs #4631. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:109

H2XSJ3              	100.00%		F1RGM3              	100.00%
Bootstrap support for H2XSJ3 as seed ortholog is 100%.
Bootstrap support for F1RGM3 as seed ortholog is 100%.

Group of orthologs #4632. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:109

F6UVD1              	100.00%		F1SUJ2              	100.00%
Bootstrap support for F6UVD1 as seed ortholog is 100%.
Bootstrap support for F1SUJ2 as seed ortholog is 100%.

Group of orthologs #4633. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:109

F7A435              	100.00%		F1SFH2              	100.00%
Bootstrap support for F7A435 as seed ortholog is 100%.
Bootstrap support for F1SFH2 as seed ortholog is 100%.

Group of orthologs #4634. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:109

F6Y4R6              	100.00%		I3LF75              	100.00%
Bootstrap support for F6Y4R6 as seed ortholog is 100%.
Bootstrap support for I3LF75 as seed ortholog is 100%.

Group of orthologs #4635. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:109

H2Y340              	100.00%		F1S721              	100.00%
Bootstrap support for H2Y340 as seed ortholog is 100%.
Bootstrap support for F1S721 as seed ortholog is 100%.

Group of orthologs #4636. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:109

H2Y3D9              	100.00%		F1SSS9              	100.00%
Bootstrap support for H2Y3D9 as seed ortholog is 100%.
Bootstrap support for F1SSS9 as seed ortholog is 100%.

Group of orthologs #4637. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 S.scrofa:109

Q1RL63              	100.00%		F2Z559              	100.00%
Bootstrap support for Q1RL63 as seed ortholog is 100%.
Bootstrap support for F2Z559 as seed ortholog is 100%.

Group of orthologs #4638. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:41

H2XK34              	100.00%		F1RM06              	100.00%
                    	       		F1RYR5              	14.69%
Bootstrap support for H2XK34 as seed ortholog is 100%.
Bootstrap support for F1RM06 as seed ortholog is 80%.

Group of orthologs #4639. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:108

H2XRA3              	100.00%		F1S528              	100.00%
                    	       		I3LI57              	100.00%
Bootstrap support for H2XRA3 as seed ortholog is 100%.
Bootstrap support for F1S528 as seed ortholog is 100%.
Bootstrap support for I3LI57 as seed ortholog is 100%.

Group of orthologs #4640. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 S.scrofa:53

F7A5D0              	100.00%		F1SMV6              	100.00%
                    	       		I3LRH2              	100.00%
Bootstrap support for F7A5D0 as seed ortholog is 80%.
Bootstrap support for F1SMV6 as seed ortholog is 98%.
Bootstrap support for I3LRH2 as seed ortholog is 98%.

Group of orthologs #4641. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:108

F7BE19              	100.00%		I3LR96              	100.00%
                    	       		F1RWI4              	19.79%
Bootstrap support for F7BE19 as seed ortholog is 100%.
Bootstrap support for I3LR96 as seed ortholog is 100%.

Group of orthologs #4642. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 S.scrofa:46

F6QSN2              	100.00%		F1S200              	100.00%
Bootstrap support for F6QSN2 as seed ortholog is 95%.
Bootstrap support for F1S200 as seed ortholog is 97%.

Group of orthologs #4643. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:108

F7ADK7              	100.00%		F1RT27              	100.00%
Bootstrap support for F7ADK7 as seed ortholog is 100%.
Bootstrap support for F1RT27 as seed ortholog is 100%.

Group of orthologs #4644. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:108

F6WC51              	100.00%		F1S9W0              	100.00%
Bootstrap support for F6WC51 as seed ortholog is 100%.
Bootstrap support for F1S9W0 as seed ortholog is 100%.

Group of orthologs #4645. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:108

F6Y9H6              	100.00%		F1SB64              	100.00%
Bootstrap support for F6Y9H6 as seed ortholog is 100%.
Bootstrap support for F1SB64 as seed ortholog is 100%.

Group of orthologs #4646. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:108

F7ANT6              	100.00%		F1SJ34              	100.00%
Bootstrap support for F7ANT6 as seed ortholog is 100%.
Bootstrap support for F1SJ34 as seed ortholog is 100%.

Group of orthologs #4647. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:108

F7B2I2              	100.00%		F1SIS9              	100.00%
Bootstrap support for F7B2I2 as seed ortholog is 100%.
Bootstrap support for F1SIS9 as seed ortholog is 100%.

Group of orthologs #4648. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:108

H2XYR3              	100.00%		F1RY70              	100.00%
Bootstrap support for H2XYR3 as seed ortholog is 100%.
Bootstrap support for F1RY70 as seed ortholog is 100%.

Group of orthologs #4649. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:108

F6UXP7              	100.00%		I3LN16              	100.00%
Bootstrap support for F6UXP7 as seed ortholog is 100%.
Bootstrap support for I3LN16 as seed ortholog is 100%.

Group of orthologs #4650. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:108

F7BLF3              	100.00%		F1SUS9              	100.00%
Bootstrap support for F7BLF3 as seed ortholog is 100%.
Bootstrap support for F1SUS9 as seed ortholog is 100%.

Group of orthologs #4651. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 S.scrofa:108

H2Y0H0              	100.00%		F1S9X5              	100.00%
Bootstrap support for H2Y0H0 as seed ortholog is 82%.
Bootstrap support for F1S9X5 as seed ortholog is 100%.

Group of orthologs #4652. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:108

H2Y1S1              	100.00%		F1SAG3              	100.00%
Bootstrap support for H2Y1S1 as seed ortholog is 100%.
Bootstrap support for F1SAG3 as seed ortholog is 100%.

Group of orthologs #4653. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:108

F7BI48              	100.00%		I3LE14              	100.00%
Bootstrap support for F7BI48 as seed ortholog is 100%.
Bootstrap support for I3LE14 as seed ortholog is 100%.

Group of orthologs #4654. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 S.scrofa:108

F6UP59              	100.00%		Q767L9              	100.00%
Bootstrap support for F6UP59 as seed ortholog is 100%.
Bootstrap support for Q767L9 as seed ortholog is 100%.

Group of orthologs #4655. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 S.scrofa:26

H2XVM5              	100.00%		P12026              	100.00%
Bootstrap support for H2XVM5 as seed ortholog is 93%.
Bootstrap support for P12026 as seed ortholog is 95%.

Group of orthologs #4656. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.scrofa:107

F6RAE8              	100.00%		F1S6V0              	100.00%
                    	       		F1RZ09              	38.72%
                    	       		I3LTF5              	36.54%
Bootstrap support for F6RAE8 as seed ortholog is 100%.
Bootstrap support for F1S6V0 as seed ortholog is 100%.

Group of orthologs #4657. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.scrofa:61

F6V1T3              	100.00%		I3L5U0              	100.00%
                    	       		Q29087              	9.01%
Bootstrap support for F6V1T3 as seed ortholog is 100%.
Bootstrap support for I3L5U0 as seed ortholog is 99%.

Group of orthologs #4658. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 S.scrofa:46

O18313              	100.00%		F1RZG1              	100.00%
                    	       		F1RWG3              	31.47%
Bootstrap support for O18313 as seed ortholog is 95%.
Bootstrap support for F1RZG1 as seed ortholog is 98%.

Group of orthologs #4659. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.scrofa:107

F6SE92              	100.00%		F1RS83              	100.00%
Bootstrap support for F6SE92 as seed ortholog is 100%.
Bootstrap support for F1RS83 as seed ortholog is 100%.

Group of orthologs #4660. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.scrofa:107

F6SAX1              	100.00%		F1RZT2              	100.00%
Bootstrap support for F6SAX1 as seed ortholog is 100%.
Bootstrap support for F1RZT2 as seed ortholog is 100%.

Group of orthologs #4661. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.scrofa:107

F7BK02              	100.00%		F1RLD1              	100.00%
Bootstrap support for F7BK02 as seed ortholog is 100%.
Bootstrap support for F1RLD1 as seed ortholog is 100%.

Group of orthologs #4662. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.scrofa:107

F6PIT9              	100.00%		P48819              	100.00%
Bootstrap support for F6PIT9 as seed ortholog is 100%.
Bootstrap support for P48819 as seed ortholog is 100%.

Group of orthologs #4663. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.scrofa:107

Q1RL89              	100.00%		F1S3H6              	100.00%
Bootstrap support for Q1RL89 as seed ortholog is 100%.
Bootstrap support for F1S3H6 as seed ortholog is 100%.

Group of orthologs #4664. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 S.scrofa:107

H2Y3A1              	100.00%		F1SFA8              	100.00%
Bootstrap support for H2Y3A1 as seed ortholog is 100%.
Bootstrap support for F1SFA8 as seed ortholog is 100%.

Group of orthologs #4665. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:106

F6XR53              	100.00%		P61288              	100.00%
                    	       		F1SQ68              	69.80%
                    	       		F1SBL3              	61.63%
Bootstrap support for F6XR53 as seed ortholog is 100%.
Bootstrap support for P61288 as seed ortholog is 100%.

Group of orthologs #4666. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:106

F6QPQ3              	100.00%		F1RNC4              	100.00%
                    	       		I3LA83              	81.77%
Bootstrap support for F6QPQ3 as seed ortholog is 100%.
Bootstrap support for F1RNC4 as seed ortholog is 100%.

Group of orthologs #4667. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:106

F6R2E4              	100.00%		F1RST3              	100.00%
Bootstrap support for F6R2E4 as seed ortholog is 100%.
Bootstrap support for F1RST3 as seed ortholog is 100%.

Group of orthologs #4668. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:106

F6QZE9              	100.00%		F1RUG3              	100.00%
Bootstrap support for F6QZE9 as seed ortholog is 100%.
Bootstrap support for F1RUG3 as seed ortholog is 100%.

Group of orthologs #4669. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:106

F6U6F4              	100.00%		F1RRA9              	100.00%
Bootstrap support for F6U6F4 as seed ortholog is 100%.
Bootstrap support for F1RRA9 as seed ortholog is 100%.

Group of orthologs #4670. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:33

F6WUD3              	100.00%		F1RR57              	100.00%
Bootstrap support for F6WUD3 as seed ortholog is 100%.
Bootstrap support for F1RR57 as seed ortholog is 94%.

Group of orthologs #4671. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:106

F7ALL0              	100.00%		F1RMQ4              	100.00%
Bootstrap support for F7ALL0 as seed ortholog is 100%.
Bootstrap support for F1RMQ4 as seed ortholog is 100%.

Group of orthologs #4672. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:106

F6X8V6              	100.00%		F1SCL5              	100.00%
Bootstrap support for F6X8V6 as seed ortholog is 100%.
Bootstrap support for F1SCL5 as seed ortholog is 100%.

Group of orthologs #4673. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:106

F6ZS91              	100.00%		F1S4Z5              	100.00%
Bootstrap support for F6ZS91 as seed ortholog is 100%.
Bootstrap support for F1S4Z5 as seed ortholog is 100%.

Group of orthologs #4674. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:106

F6QYZ4              	100.00%		I3LAT2              	100.00%
Bootstrap support for F6QYZ4 as seed ortholog is 100%.
Bootstrap support for I3LAT2 as seed ortholog is 100%.

Group of orthologs #4675. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:106

H2XQW5              	100.00%		F1S4W5              	100.00%
Bootstrap support for H2XQW5 as seed ortholog is 100%.
Bootstrap support for F1S4W5 as seed ortholog is 100%.

Group of orthologs #4676. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:106

F6V2Y5              	100.00%		I3LFD5              	100.00%
Bootstrap support for F6V2Y5 as seed ortholog is 100%.
Bootstrap support for I3LFD5 as seed ortholog is 100%.

Group of orthologs #4677. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 S.scrofa:106

F6TVG3              	100.00%		I3LTG4              	100.00%
Bootstrap support for F6TVG3 as seed ortholog is 100%.
Bootstrap support for I3LTG4 as seed ortholog is 100%.

Group of orthologs #4678. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.scrofa:33

F6XM37              	100.00%		Q9TSV6              	100.00%
                    	       		F1S5F3              	25.41%
                    	       		F1RUF1              	13.11%
Bootstrap support for F6XM37 as seed ortholog is 100%.
Bootstrap support for Q9TSV6 as seed ortholog is 98%.

Group of orthologs #4679. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 S.scrofa:105

F6RNA2              	100.00%		F1RJL8              	100.00%
H2XKE6              	6.05%		
Bootstrap support for F6RNA2 as seed ortholog is 74%.
Alternative seed ortholog is F6PMW1 (20 bits away from this cluster)
Bootstrap support for F1RJL8 as seed ortholog is 100%.

Group of orthologs #4680. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.scrofa:16

F6W239              	100.00%		F1SFC1              	100.00%
                    	       		B5ST96              	11.90%
Bootstrap support for F6W239 as seed ortholog is 100%.
Bootstrap support for F1SFC1 as seed ortholog is 71%.
Alternative seed ortholog is F1RKJ1 (16 bits away from this cluster)

Group of orthologs #4681. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.scrofa:105

F6SGK9              	100.00%		F1SH75              	100.00%
Bootstrap support for F6SGK9 as seed ortholog is 100%.
Bootstrap support for F1SH75 as seed ortholog is 100%.

Group of orthologs #4682. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.scrofa:105

F6RGX9              	100.00%		F1SK99              	100.00%
Bootstrap support for F6RGX9 as seed ortholog is 100%.
Bootstrap support for F1SK99 as seed ortholog is 100%.

Group of orthologs #4683. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.scrofa:105

F6RFU4              	100.00%		F1SU74              	100.00%
Bootstrap support for F6RFU4 as seed ortholog is 100%.
Bootstrap support for F1SU74 as seed ortholog is 100%.

Group of orthologs #4684. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.scrofa:105

H2XRD0              	100.00%		F1RNY8              	100.00%
Bootstrap support for H2XRD0 as seed ortholog is 100%.
Bootstrap support for F1RNY8 as seed ortholog is 100%.

Group of orthologs #4685. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.scrofa:16

F7A8B4              	100.00%		F1S9A7              	100.00%
Bootstrap support for F7A8B4 as seed ortholog is 100%.
Bootstrap support for F1S9A7 as seed ortholog is 66%.
Alternative seed ortholog is F1SE62 (16 bits away from this cluster)

Group of orthologs #4686. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 S.scrofa:105

H2XUY8              	100.00%		I3LAT3              	100.00%
Bootstrap support for H2XUY8 as seed ortholog is 98%.
Bootstrap support for I3LAT3 as seed ortholog is 100%.

Group of orthologs #4687. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 S.scrofa:105

H2XYW1              	100.00%		I3LH79              	100.00%
Bootstrap support for H2XYW1 as seed ortholog is 100%.
Bootstrap support for I3LH79 as seed ortholog is 100%.

Group of orthologs #4688. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 S.scrofa:5

F6SH45              	100.00%		K7GLF5              	100.00%
H2XKQ7              	10.81%		
Bootstrap support for F6SH45 as seed ortholog is 85%.
Bootstrap support for K7GLF5 as seed ortholog is 49%.
Alternative seed ortholog is I3L760 (5 bits away from this cluster)

Group of orthologs #4689. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:39

H2Y318              	100.00%		F1S2V2              	100.00%
                    	       		F1RX99              	27.69%
Bootstrap support for H2Y318 as seed ortholog is 100%.
Bootstrap support for F1S2V2 as seed ortholog is 90%.

Group of orthologs #4690. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:104

F7AAS1              	100.00%		I3LT55              	100.00%
F6S5Q9              	8.09%		
Bootstrap support for F7AAS1 as seed ortholog is 100%.
Bootstrap support for I3LT55 as seed ortholog is 100%.

Group of orthologs #4691. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:104

F6PII0              	100.00%		F1RG48              	100.00%
Bootstrap support for F6PII0 as seed ortholog is 100%.
Bootstrap support for F1RG48 as seed ortholog is 100%.

Group of orthologs #4692. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:104

F6UPQ6              	100.00%		A5GFW0              	100.00%
Bootstrap support for F6UPQ6 as seed ortholog is 100%.
Bootstrap support for A5GFW0 as seed ortholog is 100%.

Group of orthologs #4693. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:104

F6UJ50              	100.00%		F1S514              	100.00%
Bootstrap support for F6UJ50 as seed ortholog is 100%.
Bootstrap support for F1S514 as seed ortholog is 100%.

Group of orthologs #4694. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:104

F7B7C2              	100.00%		F1RMD2              	100.00%
Bootstrap support for F7B7C2 as seed ortholog is 100%.
Bootstrap support for F1RMD2 as seed ortholog is 100%.

Group of orthologs #4695. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:104

H2XL08              	100.00%		F1RQU8              	100.00%
Bootstrap support for H2XL08 as seed ortholog is 100%.
Bootstrap support for F1RQU8 as seed ortholog is 100%.

Group of orthologs #4696. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:104

F6X0T1              	100.00%		F1SUT1              	100.00%
Bootstrap support for F6X0T1 as seed ortholog is 100%.
Bootstrap support for F1SUT1 as seed ortholog is 100%.

Group of orthologs #4697. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:104

H2XT55              	100.00%		F1S588              	100.00%
Bootstrap support for H2XT55 as seed ortholog is 100%.
Bootstrap support for F1S588 as seed ortholog is 100%.

Group of orthologs #4698. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:104

F7A405              	100.00%		F1SS58              	100.00%
Bootstrap support for F7A405 as seed ortholog is 100%.
Bootstrap support for F1SS58 as seed ortholog is 100%.

Group of orthologs #4699. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:104

F6ZSI1              	100.00%		F2Z5M8              	100.00%
Bootstrap support for F6ZSI1 as seed ortholog is 100%.
Bootstrap support for F2Z5M8 as seed ortholog is 100%.

Group of orthologs #4700. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:104

H2XWV5              	100.00%		F1SLG8              	100.00%
Bootstrap support for H2XWV5 as seed ortholog is 100%.
Bootstrap support for F1SLG8 as seed ortholog is 100%.

Group of orthologs #4701. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:53

H2Y2N4              	100.00%		F2Z5V1              	100.00%
Bootstrap support for H2Y2N4 as seed ortholog is 100%.
Bootstrap support for F2Z5V1 as seed ortholog is 99%.

Group of orthologs #4702. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 S.scrofa:104

H2XTC8              	100.00%		I3LI40              	100.00%
Bootstrap support for H2XTC8 as seed ortholog is 100%.
Bootstrap support for I3LI40 as seed ortholog is 100%.

Group of orthologs #4703. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 S.scrofa:104

H2XXT0              	100.00%		P82460              	100.00%
Bootstrap support for H2XXT0 as seed ortholog is 50%.
Alternative seed ortholog is F6YXQ0 (2 bits away from this cluster)
Bootstrap support for P82460 as seed ortholog is 100%.

Group of orthologs #4704. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.scrofa:38

F7AG40              	100.00%		F1SNL1              	100.00%
                    	       		A5GFP7              	53.04%
                    	       		A8S2C3              	31.01%
Bootstrap support for F7AG40 as seed ortholog is 100%.
Bootstrap support for F1SNL1 as seed ortholog is 92%.

Group of orthologs #4705. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.scrofa:28

F6PIR1              	100.00%		I3LAJ2              	100.00%
Bootstrap support for F6PIR1 as seed ortholog is 100%.
Bootstrap support for I3LAJ2 as seed ortholog is 92%.

Group of orthologs #4706. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 S.scrofa:26

F6PMJ3              	100.00%		I3LGV9              	100.00%
Bootstrap support for F6PMJ3 as seed ortholog is 81%.
Bootstrap support for I3LGV9 as seed ortholog is 96%.

Group of orthologs #4707. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.scrofa:103

H2Y146              	100.00%		F1RG19              	100.00%
Bootstrap support for H2Y146 as seed ortholog is 100%.
Bootstrap support for F1RG19 as seed ortholog is 100%.

Group of orthologs #4708. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 S.scrofa:103

F6RDV2              	100.00%		I3LPR9              	100.00%
Bootstrap support for F6RDV2 as seed ortholog is 100%.
Bootstrap support for I3LPR9 as seed ortholog is 100%.

Group of orthologs #4709. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 S.scrofa:103

H2XX36              	100.00%		F1SBN7              	100.00%
Bootstrap support for H2XX36 as seed ortholog is 80%.
Bootstrap support for F1SBN7 as seed ortholog is 100%.

Group of orthologs #4710. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 S.scrofa:102

F6RH63              	100.00%		Q864Z2              	100.00%
                    	       		F1S215              	33.59%
                    	       		F1SN85              	27.48%
                    	       		Q3S853              	25.95%
                    	       		F1SA94              	22.52%
                    	       		F1SA95              	20.23%
                    	       		I3LEA2              	16.79%
                    	       		F1S668              	11.83%
Bootstrap support for F6RH63 as seed ortholog is 72%.
Alternative seed ortholog is F6XEC9 (11 bits away from this cluster)
Bootstrap support for Q864Z2 as seed ortholog is 100%.

Group of orthologs #4711. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.scrofa:102

H2Y1C6              	100.00%		F1SE16              	100.00%
F6ZDE8              	9.76%		F1SE17              	77.73%
Bootstrap support for H2Y1C6 as seed ortholog is 96%.
Bootstrap support for F1SE16 as seed ortholog is 100%.

Group of orthologs #4712. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.scrofa:102

F7B7V5              	100.00%		A7XNM3              	100.00%
                    	       		F1SJZ1              	8.18%
Bootstrap support for F7B7V5 as seed ortholog is 100%.
Bootstrap support for A7XNM3 as seed ortholog is 100%.

Group of orthologs #4713. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.scrofa:102

H2Y2D7              	100.00%		I3LEC8              	100.00%
                    	       		I3LRX1              	37.40%
Bootstrap support for H2Y2D7 as seed ortholog is 100%.
Bootstrap support for I3LEC8 as seed ortholog is 100%.

Group of orthologs #4714. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.scrofa:102

F6Y4Z5              	100.00%		F1RH16              	100.00%
Bootstrap support for F6Y4Z5 as seed ortholog is 100%.
Bootstrap support for F1RH16 as seed ortholog is 100%.

Group of orthologs #4715. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.scrofa:102

F6ZLV3              	100.00%		F1RSX2              	100.00%
Bootstrap support for F6ZLV3 as seed ortholog is 100%.
Bootstrap support for F1RSX2 as seed ortholog is 100%.

Group of orthologs #4716. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.scrofa:102

F6SJB0              	100.00%		F1SHV8              	100.00%
Bootstrap support for F6SJB0 as seed ortholog is 100%.
Bootstrap support for F1SHV8 as seed ortholog is 100%.

Group of orthologs #4717. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.scrofa:102

F6QNH2              	100.00%		I3LE65              	100.00%
Bootstrap support for F6QNH2 as seed ortholog is 100%.
Bootstrap support for I3LE65 as seed ortholog is 100%.

Group of orthologs #4718. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.scrofa:102

H2XNJ1              	100.00%		F1S1Z5              	100.00%
Bootstrap support for H2XNJ1 as seed ortholog is 100%.
Bootstrap support for F1S1Z5 as seed ortholog is 100%.

Group of orthologs #4719. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.scrofa:102

H2XZH5              	100.00%		F1S714              	100.00%
Bootstrap support for H2XZH5 as seed ortholog is 100%.
Bootstrap support for F1S714 as seed ortholog is 100%.

Group of orthologs #4720. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.scrofa:102

H2Y058              	100.00%		F1SJ03              	100.00%
Bootstrap support for H2Y058 as seed ortholog is 100%.
Bootstrap support for F1SJ03 as seed ortholog is 100%.

Group of orthologs #4721. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 S.scrofa:102

H2Y253              	100.00%		F1SL19              	100.00%
Bootstrap support for H2Y253 as seed ortholog is 100%.
Bootstrap support for F1SL19 as seed ortholog is 100%.

Group of orthologs #4722. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.scrofa:101

H2XYN3              	100.00%		I3LL26              	100.00%
                    	       		I3L6C7              	30.98%
                    	       		I3LSQ4              	23.17%
                    	       		I3LLP6              	12.09%
Bootstrap support for H2XYN3 as seed ortholog is 100%.
Bootstrap support for I3LL26 as seed ortholog is 100%.

Group of orthologs #4723. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.scrofa:101

F7B0J2              	100.00%		F1RJN5              	100.00%
                    	       		F1RNS0              	100.00%
                    	       		F1RG97              	23.83%
Bootstrap support for F7B0J2 as seed ortholog is 100%.
Bootstrap support for F1RJN5 as seed ortholog is 100%.
Bootstrap support for F1RNS0 as seed ortholog is 100%.

Group of orthologs #4724. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.scrofa:101

H2Y3B8              	100.00%		F1SBA6              	100.00%
                    	       		I3L763              	26.10%
                    	       		I3LTZ2              	23.66%
Bootstrap support for H2Y3B8 as seed ortholog is 100%.
Bootstrap support for F1SBA6 as seed ortholog is 100%.

Group of orthologs #4725. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.scrofa:51

F6RRN2              	100.00%		F1SKZ2              	100.00%
                    	       		F1RY80              	29.84%
Bootstrap support for F6RRN2 as seed ortholog is 100%.
Bootstrap support for F1SKZ2 as seed ortholog is 98%.

Group of orthologs #4726. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.scrofa:101

H2XWM5              	100.00%		I3LMJ2              	100.00%
                    	       		F1RJR0              	27.81%
Bootstrap support for H2XWM5 as seed ortholog is 100%.
Bootstrap support for I3LMJ2 as seed ortholog is 100%.

Group of orthologs #4727. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.scrofa:101

H2XJK4              	100.00%		F1S0T3              	100.00%
Bootstrap support for H2XJK4 as seed ortholog is 100%.
Bootstrap support for F1S0T3 as seed ortholog is 100%.

Group of orthologs #4728. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.scrofa:101

H2XL66              	100.00%		F1S6A1              	100.00%
Bootstrap support for H2XL66 as seed ortholog is 100%.
Bootstrap support for F1S6A1 as seed ortholog is 100%.

Group of orthologs #4729. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.scrofa:101

F6ZB59              	100.00%		F1SJN6              	100.00%
Bootstrap support for F6ZB59 as seed ortholog is 100%.
Bootstrap support for F1SJN6 as seed ortholog is 100%.

Group of orthologs #4730. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 S.scrofa:21

F6VRS6              	100.00%		I3LHD4              	100.00%
Bootstrap support for F6VRS6 as seed ortholog is 64%.
Alternative seed ortholog is F7ASK1 (11 bits away from this cluster)
Bootstrap support for I3LHD4 as seed ortholog is 43%.
Alternative seed ortholog is I3LDY1 (21 bits away from this cluster)

Group of orthologs #4731. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 S.scrofa:101

F6X972              	100.00%		Q9GLN5              	100.00%
Bootstrap support for F6X972 as seed ortholog is 100%.
Bootstrap support for Q9GLN5 as seed ortholog is 100%.

Group of orthologs #4732. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.scrofa:25

F6YAZ4              	100.00%		F2Z584              	100.00%
                    	       		I3LE39              	100.00%
                    	       		F2Z579              	98.64%
                    	       		F2Z580              	98.64%
                    	       		F2Z5L0              	98.64%
                    	       		F2Z578              	97.96%
                    	       		F2Z581              	97.96%
                    	       		I3LEB6              	97.28%
                    	       		I3LAQ1              	96.60%
                    	       		I3LL41              	85.71%
                    	       		F1RTQ5              	76.19%
                    	       		F1RTQ6              	75.51%
                    	       		I3LV95              	56.46%
                    	       		F1SSL5              	46.94%
                    	       		F1RYB2              	13.51%
                    	       		F1RYB3              	11.49%
Bootstrap support for F6YAZ4 as seed ortholog is 100%.
Bootstrap support for F2Z584 as seed ortholog is 89%.
Bootstrap support for I3LE39 as seed ortholog is 88%.

Group of orthologs #4733. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.scrofa:100

H2XXY8              	100.00%		F1RWU7              	100.00%
                    	       		F1SAT5              	64.65%
Bootstrap support for H2XXY8 as seed ortholog is 100%.
Bootstrap support for F1RWU7 as seed ortholog is 100%.

Group of orthologs #4734. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.scrofa:56

F6WQK5              	100.00%		F1RNW5              	100.00%
Bootstrap support for F6WQK5 as seed ortholog is 100%.
Bootstrap support for F1RNW5 as seed ortholog is 98%.

Group of orthologs #4735. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.scrofa:100

F6QFG5              	100.00%		F1SFJ7              	100.00%
Bootstrap support for F6QFG5 as seed ortholog is 100%.
Bootstrap support for F1SFJ7 as seed ortholog is 100%.

Group of orthologs #4736. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.scrofa:100

F7AZM4              	100.00%		F1RXK6              	100.00%
Bootstrap support for F7AZM4 as seed ortholog is 100%.
Bootstrap support for F1RXK6 as seed ortholog is 100%.

Group of orthologs #4737. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 S.scrofa:50

F6VU90              	100.00%		I3LGR6              	100.00%
Bootstrap support for F6VU90 as seed ortholog is 70%.
Alternative seed ortholog is F6TMB6 (9 bits away from this cluster)
Bootstrap support for I3LGR6 as seed ortholog is 99%.

Group of orthologs #4738. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 S.scrofa:25

F6URD6              	100.00%		P00592              	100.00%
Bootstrap support for F6URD6 as seed ortholog is 56%.
Alternative seed ortholog is F6ZRG6 (4 bits away from this cluster)
Bootstrap support for P00592 as seed ortholog is 83%.

Group of orthologs #4739. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.scrofa:100

F6Y7L6              	100.00%		I3LRV1              	100.00%
Bootstrap support for F6Y7L6 as seed ortholog is 100%.
Bootstrap support for I3LRV1 as seed ortholog is 100%.

Group of orthologs #4740. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 S.scrofa:100

H2Y2B5              	100.00%		F1SI83              	100.00%
Bootstrap support for H2Y2B5 as seed ortholog is 100%.
Bootstrap support for F1SI83 as seed ortholog is 100%.

Group of orthologs #4741. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.scrofa:99

F6W382              	100.00%		F1RV50              	100.00%
                    	       		F1RI78              	30.82%
                    	       		I3L8W0              	11.84%
Bootstrap support for F6W382 as seed ortholog is 100%.
Bootstrap support for F1RV50 as seed ortholog is 100%.

Group of orthologs #4742. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.scrofa:99

H2XTI2              	100.00%		F1RFL1              	100.00%
                    	       		F1RVM5              	28.42%
Bootstrap support for H2XTI2 as seed ortholog is 100%.
Bootstrap support for F1RFL1 as seed ortholog is 100%.

Group of orthologs #4743. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.scrofa:6

F6PK03              	100.00%		B6ECP2              	100.00%
Bootstrap support for F6PK03 as seed ortholog is 100%.
Bootstrap support for B6ECP2 as seed ortholog is 65%.
Alternative seed ortholog is F1SDZ6 (6 bits away from this cluster)

Group of orthologs #4744. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.scrofa:99

F6RIC2              	100.00%		F1S0S8              	100.00%
Bootstrap support for F6RIC2 as seed ortholog is 100%.
Bootstrap support for F1S0S8 as seed ortholog is 100%.

Group of orthologs #4745. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 S.scrofa:99

F6ZGB0              	100.00%		F1RXY1              	100.00%
Bootstrap support for F6ZGB0 as seed ortholog is 96%.
Bootstrap support for F1RXY1 as seed ortholog is 100%.

Group of orthologs #4746. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.scrofa:99

H2XRL3              	100.00%		F1RX76              	100.00%
Bootstrap support for H2XRL3 as seed ortholog is 100%.
Bootstrap support for F1RX76 as seed ortholog is 100%.

Group of orthologs #4747. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.scrofa:99

F6UYY4              	100.00%		I3LBG6              	100.00%
Bootstrap support for F6UYY4 as seed ortholog is 100%.
Bootstrap support for I3LBG6 as seed ortholog is 100%.

Group of orthologs #4748. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.scrofa:99

H2Y1M8              	100.00%		F1SFV0              	100.00%
Bootstrap support for H2Y1M8 as seed ortholog is 100%.
Bootstrap support for F1SFV0 as seed ortholog is 100%.

Group of orthologs #4749. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.scrofa:99

H2XVV5              	100.00%		F1SR90              	100.00%
Bootstrap support for H2XVV5 as seed ortholog is 100%.
Bootstrap support for F1SR90 as seed ortholog is 100%.

Group of orthologs #4750. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 S.scrofa:99

H2XZ38              	100.00%		I7GGX9              	100.00%
Bootstrap support for H2XZ38 as seed ortholog is 100%.
Bootstrap support for I7GGX9 as seed ortholog is 100%.

Group of orthologs #4751. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.scrofa:50

F6RQR6              	100.00%		F1SB99              	100.00%
Bootstrap support for F6RQR6 as seed ortholog is 100%.
Bootstrap support for F1SB99 as seed ortholog is 78%.

Group of orthologs #4752. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.scrofa:4

H2XVD4              	100.00%		F1RL16              	100.00%
Bootstrap support for H2XVD4 as seed ortholog is 100%.
Bootstrap support for F1RL16 as seed ortholog is 88%.

Group of orthologs #4753. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.scrofa:98

F6UG66              	100.00%		I3L707              	100.00%
Bootstrap support for F6UG66 as seed ortholog is 100%.
Bootstrap support for I3L707 as seed ortholog is 100%.

Group of orthologs #4754. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.scrofa:98

F6VNS2              	100.00%		I3L969              	100.00%
Bootstrap support for F6VNS2 as seed ortholog is 100%.
Bootstrap support for I3L969 as seed ortholog is 100%.

Group of orthologs #4755. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.scrofa:98

H2XR15              	100.00%		F1SAM7              	100.00%
Bootstrap support for H2XR15 as seed ortholog is 100%.
Bootstrap support for F1SAM7 as seed ortholog is 100%.

Group of orthologs #4756. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.scrofa:98

H2XXH3              	100.00%		F1S2Q1              	100.00%
Bootstrap support for H2XXH3 as seed ortholog is 100%.
Bootstrap support for F1S2Q1 as seed ortholog is 100%.

Group of orthologs #4757. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.scrofa:98

H2XTG3              	100.00%		F1SU83              	100.00%
Bootstrap support for H2XTG3 as seed ortholog is 100%.
Bootstrap support for F1SU83 as seed ortholog is 100%.

Group of orthologs #4758. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 S.scrofa:98

H2XUZ6              	100.00%		I3LND3              	100.00%
Bootstrap support for H2XUZ6 as seed ortholog is 100%.
Bootstrap support for I3LND3 as seed ortholog is 100%.

Group of orthologs #4759. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.scrofa:97

F6Q1K9              	100.00%		Q9N1X4              	100.00%
F6PNN6              	100.00%		Q5U9S1              	100.00%
F6V750              	79.22%		Q9XSW3              	41.84%
F6ZAZ4              	74.58%		P49874              	10.40%
F6VHD2              	73.59%		I3L6P0              	6.81%
F6VE25              	60.88%		I3LEW0              	5.36%
F6XB23              	49.15%		
F6STM2              	38.63%		
H2XYK1              	35.70%		
F6SYC7              	30.02%		
F6RAF6              	22.25%		
F6TBP5              	20.82%		
Bootstrap support for F6Q1K9 as seed ortholog is 100%.
Bootstrap support for F6PNN6 as seed ortholog is 100%.
Bootstrap support for Q9N1X4 as seed ortholog is 100%.
Bootstrap support for Q5U9S1 as seed ortholog is 100%.

Group of orthologs #4760. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 S.scrofa:30

F6VG01              	100.00%		F1SEP7              	100.00%
Q8TA66              	14.14%		
F6SYN7              	11.27%		
Bootstrap support for F6VG01 as seed ortholog is 89%.
Bootstrap support for F1SEP7 as seed ortholog is 85%.

Group of orthologs #4761. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.scrofa:97

F7BP46              	100.00%		I3LQB2              	100.00%
                    	       		F1RNK1              	36.73%
Bootstrap support for F7BP46 as seed ortholog is 100%.
Bootstrap support for I3LQB2 as seed ortholog is 100%.

Group of orthologs #4762. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.scrofa:33

F6W1G4              	100.00%		F1S3G4              	100.00%
Bootstrap support for F6W1G4 as seed ortholog is 100%.
Bootstrap support for F1S3G4 as seed ortholog is 83%.

Group of orthologs #4763. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.scrofa:97

F6QGK7              	100.00%		I3L6T9              	100.00%
Bootstrap support for F6QGK7 as seed ortholog is 100%.
Bootstrap support for I3L6T9 as seed ortholog is 100%.

Group of orthologs #4764. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.scrofa:97

F6SKP5              	100.00%		K7GSR6              	100.00%
Bootstrap support for F6SKP5 as seed ortholog is 100%.
Bootstrap support for K7GSR6 as seed ortholog is 100%.

Group of orthologs #4765. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 S.scrofa:97

H2XPE8              	100.00%		I3LIM3              	100.00%
Bootstrap support for H2XPE8 as seed ortholog is 100%.
Bootstrap support for I3LIM3 as seed ortholog is 100%.

Group of orthologs #4766. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.scrofa:96

F6S9U6              	100.00%		I3LT36              	100.00%
                    	       		F1RGV0              	36.93%
                    	       		F1S494              	18.16%
                    	       		I3L8B0              	9.86%
                    	       		F1S0X4              	5.37%
Bootstrap support for F6S9U6 as seed ortholog is 100%.
Bootstrap support for I3LT36 as seed ortholog is 100%.

Group of orthologs #4767. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.scrofa:96

F6XY64              	100.00%		F1RVU8              	100.00%
                    	       		I3LHR9              	55.75%
Bootstrap support for F6XY64 as seed ortholog is 100%.
Bootstrap support for F1RVU8 as seed ortholog is 100%.

Group of orthologs #4768. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 S.scrofa:15

H2XZD2              	100.00%		F1SUY2              	100.00%
                    	       		F1S230              	6.55%
Bootstrap support for H2XZD2 as seed ortholog is 56%.
Alternative seed ortholog is H2XME7 (5 bits away from this cluster)
Bootstrap support for F1SUY2 as seed ortholog is 62%.
Alternative seed ortholog is F1SUE4 (15 bits away from this cluster)

Group of orthologs #4769. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 S.scrofa:96

F6Q894              	100.00%		F1S117              	100.00%
Bootstrap support for F6Q894 as seed ortholog is 88%.
Bootstrap support for F1S117 as seed ortholog is 100%.

Group of orthologs #4770. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.scrofa:96

F6YTC9              	100.00%		F1RL42              	100.00%
Bootstrap support for F6YTC9 as seed ortholog is 100%.
Bootstrap support for F1RL42 as seed ortholog is 100%.

Group of orthologs #4771. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.scrofa:96

F6TYJ4              	100.00%		F1S442              	100.00%
Bootstrap support for F6TYJ4 as seed ortholog is 100%.
Bootstrap support for F1S442 as seed ortholog is 100%.

Group of orthologs #4772. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.scrofa:96

F6V2C0              	100.00%		F1SC14              	100.00%
Bootstrap support for F6V2C0 as seed ortholog is 100%.
Bootstrap support for F1SC14 as seed ortholog is 100%.

Group of orthologs #4773. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.scrofa:96

Q5QHQ8              	100.00%		B6VAQ0              	100.00%
Bootstrap support for Q5QHQ8 as seed ortholog is 100%.
Bootstrap support for B6VAQ0 as seed ortholog is 100%.

Group of orthologs #4774. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 S.scrofa:96

F6ZZS3              	100.00%		F1SHG3              	100.00%
Bootstrap support for F6ZZS3 as seed ortholog is 100%.
Bootstrap support for F1SHG3 as seed ortholog is 100%.

Group of orthologs #4775. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.scrofa:95

F6SD13              	100.00%		F2Z5R7              	100.00%
                    	       		Q6QAP6              	72.73%
                    	       		I3LJY0              	33.33%
                    	       		I3LS69              	30.30%
Bootstrap support for F6SD13 as seed ortholog is 100%.
Bootstrap support for F2Z5R7 as seed ortholog is 100%.

Group of orthologs #4776. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.scrofa:95

H2XJX4              	100.00%		F1S2K3              	100.00%
                    	       		I3L700              	79.31%
Bootstrap support for H2XJX4 as seed ortholog is 100%.
Bootstrap support for F1S2K3 as seed ortholog is 100%.

Group of orthologs #4777. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 S.scrofa:40

F6Y4T2              	100.00%		I3LAT8              	100.00%
                    	       		F1RX92              	10.65%
Bootstrap support for F6Y4T2 as seed ortholog is 79%.
Bootstrap support for I3LAT8 as seed ortholog is 87%.

Group of orthologs #4778. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.scrofa:95

H2Y0B5              	100.00%		I3LER5              	100.00%
                    	       		Q95283              	36.90%
Bootstrap support for H2Y0B5 as seed ortholog is 100%.
Bootstrap support for I3LER5 as seed ortholog is 100%.

Group of orthologs #4779. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.scrofa:14

F6ZTY6              	100.00%		F1RF43              	100.00%
Bootstrap support for F6ZTY6 as seed ortholog is 100%.
Bootstrap support for F1RF43 as seed ortholog is 64%.
Alternative seed ortholog is F1RWE3 (14 bits away from this cluster)

Group of orthologs #4780. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.scrofa:95

F6XY19              	100.00%		F1RP13              	100.00%
Bootstrap support for F6XY19 as seed ortholog is 100%.
Bootstrap support for F1RP13 as seed ortholog is 100%.

Group of orthologs #4781. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.scrofa:95

F6RJZ1              	100.00%		F1SL99              	100.00%
Bootstrap support for F6RJZ1 as seed ortholog is 100%.
Bootstrap support for F1SL99 as seed ortholog is 100%.

Group of orthologs #4782. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.scrofa:95

H2XMY1              	100.00%		F1RUW1              	100.00%
Bootstrap support for H2XMY1 as seed ortholog is 100%.
Bootstrap support for F1RUW1 as seed ortholog is 100%.

Group of orthologs #4783. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 S.scrofa:95

H2XVV1              	100.00%		F1S3W0              	100.00%
Bootstrap support for H2XVV1 as seed ortholog is 100%.
Bootstrap support for F1S3W0 as seed ortholog is 100%.

Group of orthologs #4784. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:45

F6U2P7              	100.00%		F1SHT2              	100.00%
                    	       		F1RWG5              	28.85%
                    	       		F1RZG0              	23.82%
                    	       		F1SR58              	22.37%
                    	       		F1RWG0              	9.24%
                    	       		I3LRP3              	8.10%
                    	       		F1RSW4              	5.19%
Bootstrap support for F6U2P7 as seed ortholog is 100%.
Bootstrap support for F1SHT2 as seed ortholog is 99%.

Group of orthologs #4785. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 S.scrofa:9

F6ZED8              	100.00%		F1S342              	100.00%
H2XMX9              	5.16%		O02839              	58.28%
                    	       		F1S354              	32.23%
Bootstrap support for F6ZED8 as seed ortholog is 74%.
Alternative seed ortholog is H2XTM0 (20 bits away from this cluster)
Bootstrap support for F1S342 as seed ortholog is 64%.
Alternative seed ortholog is I3LGN5 (9 bits away from this cluster)

Group of orthologs #4786. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 S.scrofa:44

H2XST5              	100.00%		F1RF16              	100.00%
                    	       		F1RF15              	97.17%
Bootstrap support for H2XST5 as seed ortholog is 74%.
Alternative seed ortholog is F6ZUI8 (22 bits away from this cluster)
Bootstrap support for F1RF16 as seed ortholog is 89%.

Group of orthologs #4787. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.scrofa:37

F6Q4V5              	100.00%		F1SDA8              	100.00%
Bootstrap support for F6Q4V5 as seed ortholog is 99%.
Bootstrap support for F1SDA8 as seed ortholog is 95%.

Group of orthologs #4788. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:94

F6PI87              	100.00%		F1ST27              	100.00%
Bootstrap support for F6PI87 as seed ortholog is 100%.
Bootstrap support for F1ST27 as seed ortholog is 100%.

Group of orthologs #4789. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:50

H2XSG2              	100.00%		A5GFX0              	100.00%
Bootstrap support for H2XSG2 as seed ortholog is 100%.
Bootstrap support for A5GFX0 as seed ortholog is 99%.

Group of orthologs #4790. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.scrofa:94

F6YYR4              	100.00%		F1S4A6              	100.00%
Bootstrap support for F6YYR4 as seed ortholog is 99%.
Bootstrap support for F1S4A6 as seed ortholog is 100%.

Group of orthologs #4791. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:94

H2XNP0              	100.00%		F1RNW1              	100.00%
Bootstrap support for H2XNP0 as seed ortholog is 100%.
Bootstrap support for F1RNW1 as seed ortholog is 100%.

Group of orthologs #4792. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:94

F7AMW5              	100.00%		F1SB47              	100.00%
Bootstrap support for F7AMW5 as seed ortholog is 100%.
Bootstrap support for F1SB47 as seed ortholog is 100%.

Group of orthologs #4793. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:94

H2XKL9              	100.00%		F1S9D0              	100.00%
Bootstrap support for H2XKL9 as seed ortholog is 100%.
Bootstrap support for F1S9D0 as seed ortholog is 100%.

Group of orthologs #4794. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:94

H2XLS7              	100.00%		F1SDW3              	100.00%
Bootstrap support for H2XLS7 as seed ortholog is 100%.
Bootstrap support for F1SDW3 as seed ortholog is 100%.

Group of orthologs #4795. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:94

F6S817              	100.00%		I3LPN4              	100.00%
Bootstrap support for F6S817 as seed ortholog is 100%.
Bootstrap support for I3LPN4 as seed ortholog is 100%.

Group of orthologs #4796. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:94

H2XSV0              	100.00%		F2Z5S0              	100.00%
Bootstrap support for H2XSV0 as seed ortholog is 100%.
Bootstrap support for F2Z5S0 as seed ortholog is 100%.

Group of orthologs #4797. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:94

H2Y135              	100.00%		F1SLD2              	100.00%
Bootstrap support for H2Y135 as seed ortholog is 100%.
Bootstrap support for F1SLD2 as seed ortholog is 100%.

Group of orthologs #4798. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 S.scrofa:94

F7BK53              	100.00%		I3LMC8              	100.00%
Bootstrap support for F7BK53 as seed ortholog is 100%.
Bootstrap support for I3LMC8 as seed ortholog is 100%.

Group of orthologs #4799. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 S.scrofa:93

F7ARP7              	100.00%		I3LCI7              	100.00%
                    	       		F1RIS4              	37.03%
                    	       		I3LJP9              	29.88%
Bootstrap support for F7ARP7 as seed ortholog is 57%.
Alternative seed ortholog is H2XV92 (8 bits away from this cluster)
Bootstrap support for I3LCI7 as seed ortholog is 100%.

Group of orthologs #4800. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.scrofa:93

F6UXI9              	100.00%		F1S486              	100.00%
Bootstrap support for F6UXI9 as seed ortholog is 100%.
Bootstrap support for F1S486 as seed ortholog is 100%.

Group of orthologs #4801. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 S.scrofa:4

F7BNX3              	100.00%		F1SAE8              	100.00%
Bootstrap support for F7BNX3 as seed ortholog is 44%.
Alternative seed ortholog is F6SBG0 (30 bits away from this cluster)
Bootstrap support for F1SAE8 as seed ortholog is 54%.
Alternative seed ortholog is I3LMY4 (4 bits away from this cluster)

Group of orthologs #4802. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.scrofa:93

H2XZ03              	100.00%		F1RZM1              	100.00%
Bootstrap support for H2XZ03 as seed ortholog is 100%.
Bootstrap support for F1RZM1 as seed ortholog is 100%.

Group of orthologs #4803. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.scrofa:93

H2XZE6              	100.00%		F1S204              	100.00%
Bootstrap support for H2XZE6 as seed ortholog is 100%.
Bootstrap support for F1S204 as seed ortholog is 100%.

Group of orthologs #4804. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.scrofa:93

H2XQC0              	100.00%		I3LSW2              	100.00%
Bootstrap support for H2XQC0 as seed ortholog is 100%.
Bootstrap support for I3LSW2 as seed ortholog is 100%.

Group of orthologs #4805. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 S.scrofa:93

H2Y221              	100.00%		I3LJG0              	100.00%
Bootstrap support for H2Y221 as seed ortholog is 100%.
Bootstrap support for I3LJG0 as seed ortholog is 100%.

Group of orthologs #4806. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:93

H2XXY9              	100.00%		I3LV84              	100.00%
Bootstrap support for H2XXY9 as seed ortholog is 97%.
Bootstrap support for I3LV84 as seed ortholog is 100%.

Group of orthologs #4807. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 S.scrofa:35

F6SKB5              	100.00%		F1SHR9              	100.00%
                    	       		F1SGL3              	19.76%
                    	       		F1SIE1              	5.09%
Bootstrap support for F6SKB5 as seed ortholog is 57%.
Alternative seed ortholog is H2XME7 (6 bits away from this cluster)
Bootstrap support for F1SHR9 as seed ortholog is 92%.

Group of orthologs #4808. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.scrofa:92

F6TFU0              	100.00%		F1RNH0              	100.00%
Bootstrap support for F6TFU0 as seed ortholog is 100%.
Bootstrap support for F1RNH0 as seed ortholog is 100%.

Group of orthologs #4809. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.scrofa:92

F6V184              	100.00%		F1RJI0              	100.00%
Bootstrap support for F6V184 as seed ortholog is 100%.
Bootstrap support for F1RJI0 as seed ortholog is 100%.

Group of orthologs #4810. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.scrofa:92

F6TUN7              	100.00%		F1SD95              	100.00%
Bootstrap support for F6TUN7 as seed ortholog is 100%.
Bootstrap support for F1SD95 as seed ortholog is 100%.

Group of orthologs #4811. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.scrofa:92

F6ZHL3              	100.00%		F1RYS1              	100.00%
Bootstrap support for F6ZHL3 as seed ortholog is 100%.
Bootstrap support for F1RYS1 as seed ortholog is 100%.

Group of orthologs #4812. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.scrofa:92

F6W1Z3              	100.00%		F1SEC0              	100.00%
Bootstrap support for F6W1Z3 as seed ortholog is 100%.
Bootstrap support for F1SEC0 as seed ortholog is 100%.

Group of orthologs #4813. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.scrofa:92

F6S214              	100.00%		F1SUB4              	100.00%
Bootstrap support for F6S214 as seed ortholog is 100%.
Bootstrap support for F1SUB4 as seed ortholog is 100%.

Group of orthologs #4814. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.scrofa:92

H2XN49              	100.00%		F1S6Q1              	100.00%
Bootstrap support for H2XN49 as seed ortholog is 100%.
Bootstrap support for F1S6Q1 as seed ortholog is 100%.

Group of orthologs #4815. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.scrofa:92

H2XYU7              	100.00%		F1SED2              	100.00%
Bootstrap support for H2XYU7 as seed ortholog is 100%.
Bootstrap support for F1SED2 as seed ortholog is 100%.

Group of orthologs #4816. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 S.scrofa:7

H2XYJ8              	100.00%		P09078              	100.00%
Bootstrap support for H2XYJ8 as seed ortholog is 99%.
Bootstrap support for P09078 as seed ortholog is 69%.
Alternative seed ortholog is F1SHT6 (7 bits away from this cluster)

Group of orthologs #4817. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 S.scrofa:92

Q8MXX3              	100.00%		K7GR23              	100.00%
Bootstrap support for Q8MXX3 as seed ortholog is 100%.
Bootstrap support for K7GR23 as seed ortholog is 100%.

Group of orthologs #4818. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:91

F6SSS2              	100.00%		P00819              	100.00%
                    	       		I3LC10              	49.55%
                    	       		I3LGV7              	49.55%
                    	       		P24540              	31.53%
Bootstrap support for F6SSS2 as seed ortholog is 100%.
Bootstrap support for P00819 as seed ortholog is 100%.

Group of orthologs #4819. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:27

F6UPX6              	100.00%		F1RPE4              	100.00%
Bootstrap support for F6UPX6 as seed ortholog is 100%.
Bootstrap support for F1RPE4 as seed ortholog is 72%.
Alternative seed ortholog is P17630 (27 bits away from this cluster)

Group of orthologs #4820. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:91

F6W0T2              	100.00%		F1RQI9              	100.00%
Bootstrap support for F6W0T2 as seed ortholog is 100%.
Bootstrap support for F1RQI9 as seed ortholog is 100%.

Group of orthologs #4821. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:91

F6S3U6              	100.00%		F1S3M6              	100.00%
Bootstrap support for F6S3U6 as seed ortholog is 100%.
Bootstrap support for F1S3M6 as seed ortholog is 100%.

Group of orthologs #4822. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:91

F7A6R2              	100.00%		F1RGS9              	100.00%
Bootstrap support for F7A6R2 as seed ortholog is 100%.
Bootstrap support for F1RGS9 as seed ortholog is 100%.

Group of orthologs #4823. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 S.scrofa:26

F6XV68              	100.00%		F1SQT7              	100.00%
Bootstrap support for F6XV68 as seed ortholog is 84%.
Bootstrap support for F1SQT7 as seed ortholog is 83%.

Group of orthologs #4824. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:91

F6U0K9              	100.00%		I3LCF4              	100.00%
Bootstrap support for F6U0K9 as seed ortholog is 100%.
Bootstrap support for I3LCF4 as seed ortholog is 100%.

Group of orthologs #4825. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:91

F6ZRC0              	100.00%		F1SMZ3              	100.00%
Bootstrap support for F6ZRC0 as seed ortholog is 100%.
Bootstrap support for F1SMZ3 as seed ortholog is 100%.

Group of orthologs #4826. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:91

H2XP14              	100.00%		F1S911              	100.00%
Bootstrap support for H2XP14 as seed ortholog is 100%.
Bootstrap support for F1S911 as seed ortholog is 100%.

Group of orthologs #4827. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:91

H2XZ00              	100.00%		F1SB76              	100.00%
Bootstrap support for H2XZ00 as seed ortholog is 100%.
Bootstrap support for F1SB76 as seed ortholog is 100%.

Group of orthologs #4828. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 S.scrofa:91

H2XTG7              	100.00%		I3LN51              	100.00%
Bootstrap support for H2XTG7 as seed ortholog is 100%.
Bootstrap support for I3LN51 as seed ortholog is 100%.

Group of orthologs #4829. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:22

F7BL82              	100.00%		I3L637              	100.00%
F6ZLA6              	41.63%		
Bootstrap support for F7BL82 as seed ortholog is 85%.
Bootstrap support for I3L637 as seed ortholog is 81%.

Group of orthologs #4830. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 S.scrofa:90

F6XW35              	100.00%		B6ICU5              	100.00%
Bootstrap support for F6XW35 as seed ortholog is 100%.
Bootstrap support for B6ICU5 as seed ortholog is 100%.

Group of orthologs #4831. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 S.scrofa:90

Q1RQ12              	100.00%		F1S9X2              	100.00%
Bootstrap support for Q1RQ12 as seed ortholog is 100%.
Bootstrap support for F1S9X2 as seed ortholog is 100%.

Group of orthologs #4832. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 S.scrofa:90

H2Y379              	100.00%		F1STM9              	100.00%
Bootstrap support for H2Y379 as seed ortholog is 100%.
Bootstrap support for F1STM9 as seed ortholog is 100%.

Group of orthologs #4833. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 S.scrofa:8

H2XUP2              	100.00%		I3LHS5              	100.00%
Bootstrap support for H2XUP2 as seed ortholog is 100%.
Bootstrap support for I3LHS5 as seed ortholog is 70%.
Alternative seed ortholog is I3LVF9 (8 bits away from this cluster)

Group of orthologs #4834. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.scrofa:15

F6UX64              	100.00%		F1SGQ6              	100.00%
F6V7C2              	5.63%		
Bootstrap support for F6UX64 as seed ortholog is 100%.
Bootstrap support for F1SGQ6 as seed ortholog is 64%.
Alternative seed ortholog is F1SGK0 (15 bits away from this cluster)

Group of orthologs #4835. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 S.scrofa:89

H2XU26              	100.00%		F2Z5C4              	100.00%
                    	       		F1RXB1              	16.55%
Bootstrap support for H2XU26 as seed ortholog is 62%.
Alternative seed ortholog is H2XME7 (15 bits away from this cluster)
Bootstrap support for F2Z5C4 as seed ortholog is 100%.

Group of orthologs #4836. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.scrofa:89

F6ZYN8              	100.00%		I3LQI3              	100.00%
                    	       		F1S1P4              	55.93%
Bootstrap support for F6ZYN8 as seed ortholog is 100%.
Bootstrap support for I3LQI3 as seed ortholog is 100%.

Group of orthologs #4837. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.scrofa:15

F6V5A7              	100.00%		A7LCJ3              	100.00%
Bootstrap support for F6V5A7 as seed ortholog is 100%.
Bootstrap support for A7LCJ3 as seed ortholog is 63%.
Alternative seed ortholog is I3LMX9 (15 bits away from this cluster)

Group of orthologs #4838. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.scrofa:89

F6Y3M3              	100.00%		F1RHB6              	100.00%
Bootstrap support for F6Y3M3 as seed ortholog is 100%.
Bootstrap support for F1RHB6 as seed ortholog is 100%.

Group of orthologs #4839. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.scrofa:89

F6V377              	100.00%		F1SA96              	100.00%
Bootstrap support for F6V377 as seed ortholog is 100%.
Bootstrap support for F1SA96 as seed ortholog is 100%.

Group of orthologs #4840. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.scrofa:89

H2XPP2              	100.00%		F1RGG8              	100.00%
Bootstrap support for H2XPP2 as seed ortholog is 100%.
Bootstrap support for F1RGG8 as seed ortholog is 100%.

Group of orthologs #4841. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 S.scrofa:89

F6XFF8              	100.00%		F1SQV7              	100.00%
Bootstrap support for F6XFF8 as seed ortholog is 100%.
Bootstrap support for F1SQV7 as seed ortholog is 100%.

Group of orthologs #4842. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 S.scrofa:35

F7BFW8              	100.00%		P10289              	100.00%
Bootstrap support for F7BFW8 as seed ortholog is 93%.
Bootstrap support for P10289 as seed ortholog is 95%.

Group of orthologs #4843. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 S.scrofa:88

F6XZ71              	100.00%		I3LIG8              	100.00%
F6R060              	33.23%		
H2XQU9              	25.16%		
H2XRX2              	14.29%		
H2XS99              	5.59%		
Bootstrap support for F6XZ71 as seed ortholog is 56%.
Alternative seed ortholog is H2XN69 (3 bits away from this cluster)
Bootstrap support for I3LIG8 as seed ortholog is 100%.

Group of orthologs #4844. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.scrofa:88

F7B983              	100.00%		F1S2X1              	100.00%
                    	       		F1S1F9              	30.71%
                    	       		F1S868              	21.52%
Bootstrap support for F7B983 as seed ortholog is 100%.
Bootstrap support for F1S2X1 as seed ortholog is 100%.

Group of orthologs #4845. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.scrofa:88

F6QL93              	100.00%		I3LM61              	100.00%
                    	       		I3LBX1              	29.71%
                    	       		F1RIL7              	5.12%
Bootstrap support for F6QL93 as seed ortholog is 100%.
Bootstrap support for I3LM61 as seed ortholog is 100%.

Group of orthologs #4846. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.scrofa:18

F6VEV6              	100.00%		F1RWG7              	100.00%
                    	       		F1SHT0              	32.18%
Bootstrap support for F6VEV6 as seed ortholog is 100%.
Bootstrap support for F1RWG7 as seed ortholog is 92%.

Group of orthologs #4847. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.scrofa:88

F7BQ97              	100.00%		F1SKY4              	100.00%
                    	       		I3L6X5              	11.14%
Bootstrap support for F7BQ97 as seed ortholog is 100%.
Bootstrap support for F1SKY4 as seed ortholog is 100%.

Group of orthologs #4848. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:43

F6PLL1              	100.00%		P79399              	100.00%
                    	       		P79400              	48.84%
Bootstrap support for F6PLL1 as seed ortholog is 90%.
Bootstrap support for P79399 as seed ortholog is 98%.

Group of orthologs #4849. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.scrofa:88

F6PHD5              	100.00%		F1RWJ0              	100.00%
Bootstrap support for F6PHD5 as seed ortholog is 100%.
Bootstrap support for F1RWJ0 as seed ortholog is 100%.

Group of orthologs #4850. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.scrofa:88

F6SUV6              	100.00%		I3LKL6              	100.00%
Bootstrap support for F6SUV6 as seed ortholog is 100%.
Bootstrap support for I3LKL6 as seed ortholog is 100%.

Group of orthologs #4851. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.scrofa:88

F6QTX2              	100.00%		O02696              	100.00%
Bootstrap support for F6QTX2 as seed ortholog is 100%.
Bootstrap support for O02696 as seed ortholog is 100%.

Group of orthologs #4852. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 S.scrofa:88

H2XZ34              	100.00%		I3LSK7              	100.00%
Bootstrap support for H2XZ34 as seed ortholog is 100%.
Bootstrap support for I3LSK7 as seed ortholog is 100%.

Group of orthologs #4853. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.scrofa:87

F6R497              	100.00%		I3LAD0              	100.00%
F6XTC5              	37.76%		I3LGF2              	19.36%
Bootstrap support for F6R497 as seed ortholog is 100%.
Bootstrap support for I3LAD0 as seed ortholog is 100%.

Group of orthologs #4854. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.scrofa:87

H2XKJ8              	100.00%		F1RJP0              	100.00%
                    	       		F1RJP4              	68.42%
Bootstrap support for H2XKJ8 as seed ortholog is 100%.
Bootstrap support for F1RJP0 as seed ortholog is 100%.

Group of orthologs #4855. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.scrofa:32

F6U4B7              	100.00%		I3L8F6              	100.00%
                    	       		I3LNQ1              	12.54%
Bootstrap support for F6U4B7 as seed ortholog is 100%.
Bootstrap support for I3L8F6 as seed ortholog is 84%.

Group of orthologs #4856. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.scrofa:87

H2XR45              	100.00%		F2Z5F4              	100.00%
                    	       		F1SPA0              	96.97%
Bootstrap support for H2XR45 as seed ortholog is 100%.
Bootstrap support for F2Z5F4 as seed ortholog is 100%.

Group of orthologs #4857. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.scrofa:87

F6PM15              	100.00%		F1SMF9              	100.00%
Bootstrap support for F6PM15 as seed ortholog is 100%.
Bootstrap support for F1SMF9 as seed ortholog is 100%.

Group of orthologs #4858. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 S.scrofa:87

F6WE99              	100.00%		F1S9Q4              	100.00%
Bootstrap support for F6WE99 as seed ortholog is 78%.
Bootstrap support for F1S9Q4 as seed ortholog is 100%.

Group of orthologs #4859. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.scrofa:2

F6TTF4              	100.00%		F1SLN1              	100.00%
Bootstrap support for F6TTF4 as seed ortholog is 100%.
Bootstrap support for F1SLN1 as seed ortholog is 83%.

Group of orthologs #4860. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.scrofa:87

F6YCC2              	100.00%		F1SC01              	100.00%
Bootstrap support for F6YCC2 as seed ortholog is 100%.
Bootstrap support for F1SC01 as seed ortholog is 100%.

Group of orthologs #4861. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 S.scrofa:87

F6TTJ0              	100.00%		F1SVB6              	100.00%
Bootstrap support for F6TTJ0 as seed ortholog is 60%.
Alternative seed ortholog is H2XUG2 (11 bits away from this cluster)
Bootstrap support for F1SVB6 as seed ortholog is 100%.

Group of orthologs #4862. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.scrofa:87

H2XZR9              	100.00%		I3L701              	100.00%
Bootstrap support for H2XZR9 as seed ortholog is 100%.
Bootstrap support for I3L701 as seed ortholog is 100%.

Group of orthologs #4863. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.scrofa:33

F7AM14              	100.00%		Q5D144              	100.00%
Bootstrap support for F7AM14 as seed ortholog is 100%.
Bootstrap support for Q5D144 as seed ortholog is 91%.

Group of orthologs #4864. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 S.scrofa:87

H2XV34              	100.00%		I3LSN9              	100.00%
Bootstrap support for H2XV34 as seed ortholog is 100%.
Bootstrap support for I3LSN9 as seed ortholog is 100%.

Group of orthologs #4865. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 S.scrofa:2

F6WLC1              	100.00%		F1RJ55              	100.00%
H2XT38              	67.69%		
Bootstrap support for F6WLC1 as seed ortholog is 56%.
Alternative seed ortholog is F6V8E3 (8 bits away from this cluster)
Bootstrap support for F1RJ55 as seed ortholog is 47%.
Alternative seed ortholog is F1S7K2 (2 bits away from this cluster)

Group of orthologs #4866. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 S.scrofa:0

F6QML6              	100.00%		I3LF30              	100.00%
F6TER2              	20.12%		
Bootstrap support for F6QML6 as seed ortholog is 66%.
Alternative seed ortholog is F6VYY1 (12 bits away from this cluster)
Bootstrap support for I3LF30 as seed ortholog is 52%.
Alternative seed ortholog is I3LSX3 (0 bits away from this cluster)

Group of orthologs #4867. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.scrofa:86

F6Y820              	100.00%		F1RGE7              	100.00%
Bootstrap support for F6Y820 as seed ortholog is 100%.
Bootstrap support for F1RGE7 as seed ortholog is 100%.

Group of orthologs #4868. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.scrofa:86

F6ZFU8              	100.00%		F1RSB6              	100.00%
Bootstrap support for F6ZFU8 as seed ortholog is 100%.
Bootstrap support for F1RSB6 as seed ortholog is 100%.

Group of orthologs #4869. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.scrofa:86

F6YQ21              	100.00%		F1SE85              	100.00%
Bootstrap support for F6YQ21 as seed ortholog is 100%.
Bootstrap support for F1SE85 as seed ortholog is 100%.

Group of orthologs #4870. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.scrofa:86

F6YE85              	100.00%		F1SPT2              	100.00%
Bootstrap support for F6YE85 as seed ortholog is 100%.
Bootstrap support for F1SPT2 as seed ortholog is 100%.

Group of orthologs #4871. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 S.scrofa:86

F6RZ17              	100.00%		I3LPC6              	100.00%
Bootstrap support for F6RZ17 as seed ortholog is 100%.
Bootstrap support for I3LPC6 as seed ortholog is 100%.

Group of orthologs #4872. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 S.scrofa:26

H2Y1P7              	100.00%		I3L579              	100.00%
F6V7B2              	6.60%		
F6Y0Y2              	5.56%		
F6VXC2              	5.21%		
Bootstrap support for H2Y1P7 as seed ortholog is 49%.
Alternative seed ortholog is F6X3P4 (1 bits away from this cluster)
Bootstrap support for I3L579 as seed ortholog is 79%.

Group of orthologs #4873. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.scrofa:85

H2XWA9              	100.00%		I3LGF9              	100.00%
                    	       		F1RJJ8              	21.20%
                    	       		I3L6R8              	5.13%
Bootstrap support for H2XWA9 as seed ortholog is 100%.
Bootstrap support for I3LGF9 as seed ortholog is 100%.

Group of orthologs #4874. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.scrofa:85

H2XV39              	100.00%		K7GMK4              	100.00%
                    	       		F2Z508              	50.77%
                    	       		Q6DUB7              	40.77%
Bootstrap support for H2XV39 as seed ortholog is 100%.
Bootstrap support for K7GMK4 as seed ortholog is 100%.

Group of orthologs #4875. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.scrofa:85

F6R508              	100.00%		F1RG27              	100.00%
Bootstrap support for F6R508 as seed ortholog is 100%.
Bootstrap support for F1RG27 as seed ortholog is 100%.

Group of orthologs #4876. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.scrofa:85

F6WVC9              	100.00%		F1RFS6              	100.00%
Bootstrap support for F6WVC9 as seed ortholog is 100%.
Bootstrap support for F1RFS6 as seed ortholog is 100%.

Group of orthologs #4877. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.scrofa:85

F6ZJE6              	100.00%		F1RFM7              	100.00%
Bootstrap support for F6ZJE6 as seed ortholog is 100%.
Bootstrap support for F1RFM7 as seed ortholog is 100%.

Group of orthologs #4878. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.scrofa:85

H2XLI3              	100.00%		F1S142              	100.00%
Bootstrap support for H2XLI3 as seed ortholog is 100%.
Bootstrap support for F1S142 as seed ortholog is 100%.

Group of orthologs #4879. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.scrofa:85

F6RI89              	100.00%		I3LEE3              	100.00%
Bootstrap support for F6RI89 as seed ortholog is 100%.
Bootstrap support for I3LEE3 as seed ortholog is 100%.

Group of orthologs #4880. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.scrofa:85

H2XM81              	100.00%		F1SKT7              	100.00%
Bootstrap support for H2XM81 as seed ortholog is 100%.
Bootstrap support for F1SKT7 as seed ortholog is 100%.

Group of orthologs #4881. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.scrofa:85

F6YPN5              	100.00%		I3LGG2              	100.00%
Bootstrap support for F6YPN5 as seed ortholog is 100%.
Bootstrap support for I3LGG2 as seed ortholog is 100%.

Group of orthologs #4882. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 S.scrofa:85

H2Y167              	100.00%		I3LS73              	100.00%
Bootstrap support for H2Y167 as seed ortholog is 100%.
Bootstrap support for I3LS73 as seed ortholog is 100%.

Group of orthologs #4883. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:84

F6TXQ6              	100.00%		F1SHW5              	100.00%
F6V198              	34.95%		
Bootstrap support for F6TXQ6 as seed ortholog is 100%.
Bootstrap support for F1SHW5 as seed ortholog is 100%.

Group of orthologs #4884. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:84

Q8HIN7              	100.00%		H9KVH1              	100.00%
                    	       		O79875              	100.00%
Bootstrap support for Q8HIN7 as seed ortholog is 100%.
Bootstrap support for H9KVH1 as seed ortholog is 100%.
Bootstrap support for O79875 as seed ortholog is 100%.

Group of orthologs #4885. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:84

H2XQM9              	100.00%		F1S0G4              	100.00%
Bootstrap support for H2XQM9 as seed ortholog is 100%.
Bootstrap support for F1S0G4 as seed ortholog is 100%.

Group of orthologs #4886. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:84

F7BCU9              	100.00%		F2Z5B3              	100.00%
Bootstrap support for F7BCU9 as seed ortholog is 100%.
Bootstrap support for F2Z5B3 as seed ortholog is 100%.

Group of orthologs #4887. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:84

H2XM23              	100.00%		F1STH7              	100.00%
Bootstrap support for H2XM23 as seed ortholog is 100%.
Bootstrap support for F1STH7 as seed ortholog is 100%.

Group of orthologs #4888. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:84

H2Y134              	100.00%		F1S8W7              	100.00%
Bootstrap support for H2Y134 as seed ortholog is 100%.
Bootstrap support for F1S8W7 as seed ortholog is 100%.

Group of orthologs #4889. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:84

H2XRN8              	100.00%		F2Z523              	100.00%
Bootstrap support for H2XRN8 as seed ortholog is 100%.
Bootstrap support for F2Z523 as seed ortholog is 100%.

Group of orthologs #4890. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:84

H2Y080              	100.00%		I3LJH5              	100.00%
Bootstrap support for H2Y080 as seed ortholog is 100%.
Bootstrap support for I3LJH5 as seed ortholog is 100%.

Group of orthologs #4891. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 S.scrofa:84

H2XPZ5              	100.00%		P81045              	100.00%
Bootstrap support for H2XPZ5 as seed ortholog is 100%.
Bootstrap support for P81045 as seed ortholog is 100%.

Group of orthologs #4892. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:83

F6Z6J9              	100.00%		C0JPM4              	100.00%
                    	       		F1SPS4              	19.58%
                    	       		P35624              	16.97%
                    	       		I3LEZ2              	16.71%
Bootstrap support for F6Z6J9 as seed ortholog is 77%.
Bootstrap support for C0JPM4 as seed ortholog is 100%.

Group of orthologs #4893. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.scrofa:83

Q8I6J7              	100.00%		F1RY78              	100.00%
                    	       		F1SMG2              	13.26%
                    	       		F1RVC5              	11.33%
                    	       		Q9N198              	7.73%
Bootstrap support for Q8I6J7 as seed ortholog is 100%.
Bootstrap support for F1RY78 as seed ortholog is 100%.

Group of orthologs #4894. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.scrofa:83

F6UKU4              	100.00%		F1RUD8              	100.00%
Bootstrap support for F6UKU4 as seed ortholog is 100%.
Bootstrap support for F1RUD8 as seed ortholog is 100%.

Group of orthologs #4895. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.scrofa:83

F6QG58              	100.00%		I3LH25              	100.00%
Bootstrap support for F6QG58 as seed ortholog is 100%.
Bootstrap support for I3LH25 as seed ortholog is 100%.

Group of orthologs #4896. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.scrofa:83

F6YI07              	100.00%		F1SNB0              	100.00%
Bootstrap support for F6YI07 as seed ortholog is 100%.
Bootstrap support for F1SNB0 as seed ortholog is 100%.

Group of orthologs #4897. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.scrofa:83

H2XPF2              	100.00%		F1S7I7              	100.00%
Bootstrap support for H2XPF2 as seed ortholog is 100%.
Bootstrap support for F1S7I7 as seed ortholog is 100%.

Group of orthologs #4898. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.scrofa:24

F6W8U8              	100.00%		Q45KW7              	100.00%
Bootstrap support for F6W8U8 as seed ortholog is 79%.
Bootstrap support for Q45KW7 as seed ortholog is 86%.

Group of orthologs #4899. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 S.scrofa:35

H2XMW9              	100.00%		I3LID5              	100.00%
Bootstrap support for H2XMW9 as seed ortholog is 100%.
Bootstrap support for I3LID5 as seed ortholog is 97%.

Group of orthologs #4900. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:82

F6Z0B9              	100.00%		F1SDA2              	100.00%
F6QFQ6              	56.14%		
Bootstrap support for F6Z0B9 as seed ortholog is 100%.
Bootstrap support for F1SDA2 as seed ortholog is 100%.

Group of orthologs #4901. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:35

H2Y3S3              	100.00%		P80928              	100.00%
H2Y234              	21.43%		
Bootstrap support for H2Y3S3 as seed ortholog is 100%.
Bootstrap support for P80928 as seed ortholog is 96%.

Group of orthologs #4902. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:82

F6PL73              	100.00%		F1RH86              	100.00%
Bootstrap support for F6PL73 as seed ortholog is 100%.
Bootstrap support for F1RH86 as seed ortholog is 100%.

Group of orthologs #4903. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:82

F7BNZ7              	100.00%		F1RQH5              	100.00%
Bootstrap support for F7BNZ7 as seed ortholog is 100%.
Bootstrap support for F1RQH5 as seed ortholog is 100%.

Group of orthologs #4904. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:82

F6ZP02              	100.00%		F1S580              	100.00%
Bootstrap support for F6ZP02 as seed ortholog is 100%.
Bootstrap support for F1S580 as seed ortholog is 100%.

Group of orthologs #4905. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 S.scrofa:4

H2XU77              	100.00%		F1S0J3              	100.00%
Bootstrap support for H2XU77 as seed ortholog is 63%.
Alternative seed ortholog is F7AJQ7 (13 bits away from this cluster)
Bootstrap support for F1S0J3 as seed ortholog is 54%.
Alternative seed ortholog is F1S0J2 (4 bits away from this cluster)

Group of orthologs #4906. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:82

F6Q587              	100.00%		I3LSS5              	100.00%
Bootstrap support for F6Q587 as seed ortholog is 100%.
Bootstrap support for I3LSS5 as seed ortholog is 100%.

Group of orthologs #4907. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:82

F6YWD0              	100.00%		I3L723              	100.00%
Bootstrap support for F6YWD0 as seed ortholog is 100%.
Bootstrap support for I3L723 as seed ortholog is 100%.

Group of orthologs #4908. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:82

H2XXL3              	100.00%		F1S5C3              	100.00%
Bootstrap support for H2XXL3 as seed ortholog is 100%.
Bootstrap support for F1S5C3 as seed ortholog is 100%.

Group of orthologs #4909. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:82

H2XTV0              	100.00%		F1SI94              	100.00%
Bootstrap support for H2XTV0 as seed ortholog is 100%.
Bootstrap support for F1SI94 as seed ortholog is 100%.

Group of orthologs #4910. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:82

H2Y0C6              	100.00%		F1SRA9              	100.00%
Bootstrap support for H2Y0C6 as seed ortholog is 100%.
Bootstrap support for F1SRA9 as seed ortholog is 100%.

Group of orthologs #4911. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:82

H2XSP6              	100.00%		I3LAW1              	100.00%
Bootstrap support for H2XSP6 as seed ortholog is 100%.
Bootstrap support for I3LAW1 as seed ortholog is 100%.

Group of orthologs #4912. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:82

H2XVJ9              	100.00%		I3LAH4              	100.00%
Bootstrap support for H2XVJ9 as seed ortholog is 100%.
Bootstrap support for I3LAH4 as seed ortholog is 100%.

Group of orthologs #4913. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 S.scrofa:82

H2XXZ8              	100.00%		I3LC49              	100.00%
Bootstrap support for H2XXZ8 as seed ortholog is 100%.
Bootstrap support for I3LC49 as seed ortholog is 100%.

Group of orthologs #4914. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:2

H2XK86              	100.00%		A5GFP8              	100.00%
                    	       		I3L7P2              	54.10%
Bootstrap support for H2XK86 as seed ortholog is 100%.
Bootstrap support for A5GFP8 as seed ortholog is 56%.
Alternative seed ortholog is F1RMC2 (2 bits away from this cluster)

Group of orthologs #4915. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:15

H2XWH1              	100.00%		F1S0L5              	100.00%
                    	       		Q8HZJ6              	7.74%
Bootstrap support for H2XWH1 as seed ortholog is 100%.
Bootstrap support for F1S0L5 as seed ortholog is 31%.
Alternative seed ortholog is F1SCU4 (15 bits away from this cluster)

Group of orthologs #4916. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:7

F6ZNX5              	100.00%		I3LQH3              	100.00%
H2Y0F5              	27.32%		
Bootstrap support for F6ZNX5 as seed ortholog is 100%.
Bootstrap support for I3LQH3 as seed ortholog is 61%.
Alternative seed ortholog is I3LJW7 (7 bits away from this cluster)

Group of orthologs #4917. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:81

H2XZU9              	100.00%		I3L768              	100.00%
                    	       		I3LSN3              	100.00%
Bootstrap support for H2XZU9 as seed ortholog is 100%.
Bootstrap support for I3L768 as seed ortholog is 100%.
Bootstrap support for I3LSN3 as seed ortholog is 100%.

Group of orthologs #4918. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:81

H2XZI7              	100.00%		P35323              	100.00%
                    	       		I3LRR1              	24.14%
Bootstrap support for H2XZI7 as seed ortholog is 100%.
Bootstrap support for P35323 as seed ortholog is 100%.

Group of orthologs #4919. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:81

F6QPS8              	100.00%		F1RGK8              	100.00%
Bootstrap support for F6QPS8 as seed ortholog is 100%.
Bootstrap support for F1RGK8 as seed ortholog is 100%.

Group of orthologs #4920. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 S.scrofa:81

F6QBW9              	100.00%		F1RVD7              	100.00%
Bootstrap support for F6QBW9 as seed ortholog is 82%.
Bootstrap support for F1RVD7 as seed ortholog is 100%.

Group of orthologs #4921. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:81

F6WAE5              	100.00%		F1S8Q2              	100.00%
Bootstrap support for F6WAE5 as seed ortholog is 100%.
Bootstrap support for F1S8Q2 as seed ortholog is 100%.

Group of orthologs #4922. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:81

F6U895              	100.00%		F1SV86              	100.00%
Bootstrap support for F6U895 as seed ortholog is 100%.
Bootstrap support for F1SV86 as seed ortholog is 100%.

Group of orthologs #4923. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:81

F6PKA8              	100.00%		O19072              	100.00%
Bootstrap support for F6PKA8 as seed ortholog is 100%.
Bootstrap support for O19072 as seed ortholog is 100%.

Group of orthologs #4924. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 S.scrofa:81

F6XFV9              	100.00%		I3LBB7              	100.00%
Bootstrap support for F6XFV9 as seed ortholog is 47%.
Alternative seed ortholog is F6UQQ5 (1 bits away from this cluster)
Bootstrap support for I3LBB7 as seed ortholog is 100%.

Group of orthologs #4925. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 S.scrofa:81

H2XPQ3              	100.00%		I3LVA4              	100.00%
Bootstrap support for H2XPQ3 as seed ortholog is 100%.
Bootstrap support for I3LVA4 as seed ortholog is 100%.

Group of orthologs #4926. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.scrofa:34

H2XV30              	100.00%		F1RF33              	100.00%
F6RRQ4              	31.25%		I3LF45              	11.03%
Bootstrap support for H2XV30 as seed ortholog is 100%.
Bootstrap support for F1RF33 as seed ortholog is 85%.

Group of orthologs #4927. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.scrofa:32

H2Y2I7              	100.00%		F1S064              	100.00%
                    	       		F1SFQ7              	27.44%
                    	       		F1SC08              	9.77%
Bootstrap support for H2Y2I7 as seed ortholog is 100%.
Bootstrap support for F1S064 as seed ortholog is 51%.
Alternative seed ortholog is I3LR01 (32 bits away from this cluster)

Group of orthologs #4928. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.scrofa:80

H2XZU2              	100.00%		F1RPN4              	100.00%
                    	       		F1SF13              	18.92%
Bootstrap support for H2XZU2 as seed ortholog is 100%.
Bootstrap support for F1RPN4 as seed ortholog is 100%.

Group of orthologs #4929. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.scrofa:80

F6T4M6              	100.00%		F1RY32              	100.00%
Bootstrap support for F6T4M6 as seed ortholog is 100%.
Bootstrap support for F1RY32 as seed ortholog is 100%.

Group of orthologs #4930. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.scrofa:80

F6Z833              	100.00%		F1S3T8              	100.00%
Bootstrap support for F6Z833 as seed ortholog is 100%.
Bootstrap support for F1S3T8 as seed ortholog is 100%.

Group of orthologs #4931. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 S.scrofa:27

H2XWM7              	100.00%		F1RMP0              	100.00%
Bootstrap support for H2XWM7 as seed ortholog is 100%.
Bootstrap support for F1RMP0 as seed ortholog is 94%.

Group of orthologs #4932. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 S.scrofa:10

H2XRF2              	100.00%		I3LEV7              	100.00%
Bootstrap support for H2XRF2 as seed ortholog is 98%.
Bootstrap support for I3LEV7 as seed ortholog is 69%.
Alternative seed ortholog is F1S1R4 (10 bits away from this cluster)

Group of orthologs #4933. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.scrofa:79

H2XMI0              	100.00%		F1RVD8              	100.00%
F6UNF1              	5.09%		F1RGI5              	12.63%
Bootstrap support for H2XMI0 as seed ortholog is 100%.
Bootstrap support for F1RVD8 as seed ortholog is 100%.

Group of orthologs #4934. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.scrofa:79

F6QZW7              	100.00%		F1SH58              	100.00%
                    	       		F1RUW8              	38.11%
Bootstrap support for F6QZW7 as seed ortholog is 100%.
Bootstrap support for F1SH58 as seed ortholog is 100%.

Group of orthologs #4935. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.scrofa:79

H2XKU1              	100.00%		F1S4Q9              	100.00%
                    	       		F1RQV5              	17.24%
Bootstrap support for H2XKU1 as seed ortholog is 100%.
Bootstrap support for F1S4Q9 as seed ortholog is 100%.

Group of orthologs #4936. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 S.scrofa:13

H2XZ15              	100.00%		I3L9T3              	100.00%
                    	       		F1SLA1              	94.43%
Bootstrap support for H2XZ15 as seed ortholog is 76%.
Bootstrap support for I3L9T3 as seed ortholog is 64%.
Alternative seed ortholog is F1RVU7 (13 bits away from this cluster)

Group of orthologs #4937. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.scrofa:79

F7B8Z4              	100.00%		Q712U6              	100.00%
                    	       		P68211              	61.49%
Bootstrap support for F7B8Z4 as seed ortholog is 100%.
Bootstrap support for Q712U6 as seed ortholog is 100%.

Group of orthologs #4938. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.scrofa:79

H2Y1U7              	100.00%		I3LSL7              	100.00%
                    	       		K7GRF6              	46.34%
Bootstrap support for H2Y1U7 as seed ortholog is 100%.
Bootstrap support for I3LSL7 as seed ortholog is 100%.

Group of orthologs #4939. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.scrofa:79

F6TXH2              	100.00%		F1S7B1              	100.00%
Bootstrap support for F6TXH2 as seed ortholog is 71%.
Alternative seed ortholog is F6X6Q2 (19 bits away from this cluster)
Bootstrap support for F1S7B1 as seed ortholog is 100%.

Group of orthologs #4940. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 S.scrofa:18

F6YNR7              	100.00%		F1RW98              	100.00%
Bootstrap support for F6YNR7 as seed ortholog is 95%.
Bootstrap support for F1RW98 as seed ortholog is 84%.

Group of orthologs #4941. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 S.scrofa:79

F6WM13              	100.00%		F1S707              	100.00%
Bootstrap support for F6WM13 as seed ortholog is 68%.
Alternative seed ortholog is H2XXN7 (20 bits away from this cluster)
Bootstrap support for F1S707 as seed ortholog is 100%.

Group of orthologs #4942. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.scrofa:79

F6T6X1              	100.00%		I3LC04              	100.00%
Bootstrap support for F6T6X1 as seed ortholog is 100%.
Bootstrap support for I3LC04 as seed ortholog is 100%.

Group of orthologs #4943. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.scrofa:79

F6YE69              	100.00%		F1SQ90              	100.00%
Bootstrap support for F6YE69 as seed ortholog is 100%.
Bootstrap support for F1SQ90 as seed ortholog is 100%.

Group of orthologs #4944. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.scrofa:79

H2XQQ7              	100.00%		F1SDW1              	100.00%
Bootstrap support for H2XQQ7 as seed ortholog is 100%.
Bootstrap support for F1SDW1 as seed ortholog is 100%.

Group of orthologs #4945. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 S.scrofa:35

F6V610              	100.00%		I3LU79              	100.00%
Bootstrap support for F6V610 as seed ortholog is 83%.
Bootstrap support for I3LU79 as seed ortholog is 89%.

Group of orthologs #4946. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.scrofa:79

F6WYJ4              	100.00%		I3LS63              	100.00%
Bootstrap support for F6WYJ4 as seed ortholog is 100%.
Bootstrap support for I3LS63 as seed ortholog is 100%.

Group of orthologs #4947. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.scrofa:79

F7ABG7              	100.00%		I3LI41              	100.00%
Bootstrap support for F7ABG7 as seed ortholog is 100%.
Bootstrap support for I3LI41 as seed ortholog is 100%.

Group of orthologs #4948. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.scrofa:79

H2XWR5              	100.00%		F1ST16              	100.00%
Bootstrap support for H2XWR5 as seed ortholog is 100%.
Bootstrap support for F1ST16 as seed ortholog is 100%.

Group of orthologs #4949. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 S.scrofa:79

H2XU60              	100.00%		Q2EN82              	100.00%
Bootstrap support for H2XU60 as seed ortholog is 100%.
Bootstrap support for Q2EN82 as seed ortholog is 100%.

Group of orthologs #4950. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 S.scrofa:78

F6YLP6              	100.00%		F1SEJ3              	100.00%
                    	       		F1S1H4              	18.53%
Bootstrap support for F6YLP6 as seed ortholog is 75%.
Bootstrap support for F1SEJ3 as seed ortholog is 100%.

Group of orthologs #4951. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 S.scrofa:78

H2XYF7              	100.00%		F1RRH6              	100.00%
                    	       		F1SIU4              	100.00%
Bootstrap support for H2XYF7 as seed ortholog is 100%.
Bootstrap support for F1RRH6 as seed ortholog is 100%.
Bootstrap support for F1SIU4 as seed ortholog is 100%.

Group of orthologs #4952. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 S.scrofa:22

F7ADD0              	100.00%		K7GRK4              	100.00%
F6Z3I6              	37.33%		
Bootstrap support for F7ADD0 as seed ortholog is 100%.
Bootstrap support for K7GRK4 as seed ortholog is 80%.

Group of orthologs #4953. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 S.scrofa:19

F7AVR1              	100.00%		F1SC87              	100.00%
Bootstrap support for F7AVR1 as seed ortholog is 61%.
Alternative seed ortholog is F7BLR9 (4 bits away from this cluster)
Bootstrap support for F1SC87 as seed ortholog is 82%.

Group of orthologs #4954. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 S.scrofa:78

F6PQS1              	100.00%		I3LNZ8              	100.00%
Bootstrap support for F6PQS1 as seed ortholog is 72%.
Alternative seed ortholog is F6VXQ6 (13 bits away from this cluster)
Bootstrap support for I3LNZ8 as seed ortholog is 100%.

Group of orthologs #4955. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 S.scrofa:78

F6SGC2              	100.00%		I3LVM1              	100.00%
Bootstrap support for F6SGC2 as seed ortholog is 100%.
Bootstrap support for I3LVM1 as seed ortholog is 100%.

Group of orthologs #4956. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 S.scrofa:78

H2XSS0              	100.00%		F2Z5M3              	100.00%
Bootstrap support for H2XSS0 as seed ortholog is 100%.
Bootstrap support for F2Z5M3 as seed ortholog is 100%.

Group of orthologs #4957. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 S.scrofa:34

F6T9N5              	100.00%		F1S5I7              	100.00%
Bootstrap support for F6T9N5 as seed ortholog is 100%.
Bootstrap support for F1S5I7 as seed ortholog is 93%.

Group of orthologs #4958. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 S.scrofa:77

F6YWN2              	100.00%		F1SA62              	100.00%
Bootstrap support for F6YWN2 as seed ortholog is 100%.
Bootstrap support for F1SA62 as seed ortholog is 100%.

Group of orthologs #4959. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 S.scrofa:77

H2XT59              	100.00%		F1RX45              	100.00%
Bootstrap support for H2XT59 as seed ortholog is 100%.
Bootstrap support for F1RX45 as seed ortholog is 100%.

Group of orthologs #4960. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 S.scrofa:77

F6UFD9              	100.00%		I3L9T7              	100.00%
Bootstrap support for F6UFD9 as seed ortholog is 100%.
Bootstrap support for I3L9T7 as seed ortholog is 100%.

Group of orthologs #4961. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 S.scrofa:77

F6ZDJ9              	100.00%		F1SVB5              	100.00%
Bootstrap support for F6ZDJ9 as seed ortholog is 100%.
Bootstrap support for F1SVB5 as seed ortholog is 100%.

Group of orthologs #4962. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 S.scrofa:76

F6SKT1              	100.00%		I3L9Q6              	100.00%
                    	       		F1SHT3              	31.45%
                    	       		F1RWG1              	26.29%
                    	       		F1SHT4              	16.22%
                    	       		E1U314              	15.23%
                    	       		F1RWG2              	14.00%
Bootstrap support for F6SKT1 as seed ortholog is 59%.
Alternative seed ortholog is Q4H363 (5 bits away from this cluster)
Bootstrap support for I3L9Q6 as seed ortholog is 100%.

Group of orthologs #4963. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 S.scrofa:24

Q4H2X3              	100.00%		F2Z538              	100.00%
                    	       		F1RSD4              	93.21%
                    	       		F1RQG1              	45.25%
                    	       		F1S7P4              	7.69%
Bootstrap support for Q4H2X3 as seed ortholog is 83%.
Bootstrap support for F2Z538 as seed ortholog is 84%.

Group of orthologs #4964. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:76

F6WEI4              	100.00%		F1RYC6              	100.00%
                    	       		F1RKS0              	66.67%
                    	       		F1SG12              	5.19%
Bootstrap support for F6WEI4 as seed ortholog is 100%.
Bootstrap support for F1RYC6 as seed ortholog is 100%.

Group of orthologs #4965. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:76

H2XNZ7              	100.00%		I3L933              	100.00%
F6SAA4              	17.83%		
Bootstrap support for H2XNZ7 as seed ortholog is 100%.
Bootstrap support for I3L933 as seed ortholog is 100%.

Group of orthologs #4966. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:76

H2XLB3              	100.00%		I3LEA7              	100.00%
H2XXC7              	9.59%		
Bootstrap support for H2XLB3 as seed ortholog is 100%.
Bootstrap support for I3LEA7 as seed ortholog is 100%.

Group of orthologs #4967. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 S.scrofa:76

H2Y0I3              	100.00%		I3LGS8              	100.00%
                    	       		F1SCF2              	33.11%
Bootstrap support for H2Y0I3 as seed ortholog is 79%.
Bootstrap support for I3LGS8 as seed ortholog is 100%.

Group of orthologs #4968. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:76

F6RE92              	100.00%		F1RR01              	100.00%
Bootstrap support for F6RE92 as seed ortholog is 100%.
Bootstrap support for F1RR01 as seed ortholog is 100%.

Group of orthologs #4969. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:76

H2XKM9              	100.00%		F1RK67              	100.00%
Bootstrap support for H2XKM9 as seed ortholog is 100%.
Bootstrap support for F1RK67 as seed ortholog is 100%.

Group of orthologs #4970. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:76

H2Y018              	100.00%		B2MU85              	100.00%
Bootstrap support for H2Y018 as seed ortholog is 100%.
Bootstrap support for B2MU85 as seed ortholog is 100%.

Group of orthologs #4971. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:76

F7BC32              	100.00%		F1SCH1              	100.00%
Bootstrap support for F7BC32 as seed ortholog is 100%.
Bootstrap support for F1SCH1 as seed ortholog is 100%.

Group of orthologs #4972. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:76

H2XYV2              	100.00%		F1RRC1              	100.00%
Bootstrap support for H2XYV2 as seed ortholog is 100%.
Bootstrap support for F1RRC1 as seed ortholog is 100%.

Group of orthologs #4973. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:76

H2XPW1              	100.00%		I3L8E9              	100.00%
Bootstrap support for H2XPW1 as seed ortholog is 100%.
Bootstrap support for I3L8E9 as seed ortholog is 100%.

Group of orthologs #4974. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:76

H2XKE7              	100.00%		I3LHJ1              	100.00%
Bootstrap support for H2XKE7 as seed ortholog is 100%.
Bootstrap support for I3LHJ1 as seed ortholog is 100%.

Group of orthologs #4975. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 S.scrofa:76

H2XZB2              	100.00%		I3LG04              	100.00%
Bootstrap support for H2XZB2 as seed ortholog is 100%.
Bootstrap support for I3LG04 as seed ortholog is 100%.

Group of orthologs #4976. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.scrofa:75

F6YAV6              	100.00%		F1SK26              	100.00%
                    	       		I3LSV5              	90.55%
Bootstrap support for F6YAV6 as seed ortholog is 100%.
Bootstrap support for F1SK26 as seed ortholog is 100%.

Group of orthologs #4977. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.scrofa:4

F6S3B3              	100.00%		I3LGR9              	100.00%
                    	       		F1SM11              	29.43%
Bootstrap support for F6S3B3 as seed ortholog is 100%.
Bootstrap support for I3LGR9 as seed ortholog is 73%.
Alternative seed ortholog is F1S4S0 (4 bits away from this cluster)

Group of orthologs #4978. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 S.scrofa:23

F6QCV4              	100.00%		F1SBQ6              	100.00%
Bootstrap support for F6QCV4 as seed ortholog is 64%.
Alternative seed ortholog is F6Y9B7 (10 bits away from this cluster)
Bootstrap support for F1SBQ6 as seed ortholog is 81%.

Group of orthologs #4979. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.scrofa:75

H2XP82              	100.00%		F1RIF6              	100.00%
Bootstrap support for H2XP82 as seed ortholog is 100%.
Bootstrap support for F1RIF6 as seed ortholog is 100%.

Group of orthologs #4980. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.scrofa:17

H2XUX1              	100.00%		F1SHH2              	100.00%
Bootstrap support for H2XUX1 as seed ortholog is 100%.
Bootstrap support for F1SHH2 as seed ortholog is 89%.

Group of orthologs #4981. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 S.scrofa:75

F6RTI2              	100.00%		Q9XT10              	100.00%
Bootstrap support for F6RTI2 as seed ortholog is 86%.
Bootstrap support for Q9XT10 as seed ortholog is 100%.

Group of orthologs #4982. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.scrofa:75

F6W8X6              	100.00%		K7GNV3              	100.00%
Bootstrap support for F6W8X6 as seed ortholog is 100%.
Bootstrap support for K7GNV3 as seed ortholog is 100%.

Group of orthologs #4983. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.scrofa:75

H2XRN2              	100.00%		I3LJQ3              	100.00%
Bootstrap support for H2XRN2 as seed ortholog is 100%.
Bootstrap support for I3LJQ3 as seed ortholog is 100%.

Group of orthologs #4984. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 S.scrofa:75

H2XY92              	100.00%		P01359              	100.00%
Bootstrap support for H2XY92 as seed ortholog is 100%.
Bootstrap support for P01359 as seed ortholog is 100%.

Group of orthologs #4985. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.scrofa:74

H2XVX2              	100.00%		F1SC57              	100.00%
H2XPV6              	29.89%		
H2XUK8              	29.05%		
Bootstrap support for H2XVX2 as seed ortholog is 100%.
Bootstrap support for F1SC57 as seed ortholog is 100%.

Group of orthologs #4986. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 S.scrofa:74

Q4H3V8              	100.00%		E3VJQ3              	100.00%
                    	       		I3LBJ2              	43.75%
Bootstrap support for Q4H3V8 as seed ortholog is 81%.
Bootstrap support for E3VJQ3 as seed ortholog is 100%.

Group of orthologs #4987. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.scrofa:74

H2Y004              	100.00%		F1SEP5              	100.00%
                    	       		F1RWW0              	14.43%
Bootstrap support for H2Y004 as seed ortholog is 100%.
Bootstrap support for F1SEP5 as seed ortholog is 100%.

Group of orthologs #4988. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.scrofa:74

F6R5I1              	100.00%		F1SDM9              	100.00%
Bootstrap support for F6R5I1 as seed ortholog is 100%.
Bootstrap support for F1SDM9 as seed ortholog is 100%.

Group of orthologs #4989. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.scrofa:74

H2XS09              	100.00%		F1RRD9              	100.00%
Bootstrap support for H2XS09 as seed ortholog is 100%.
Bootstrap support for F1RRD9 as seed ortholog is 100%.

Group of orthologs #4990. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.scrofa:74

F6TDV1              	100.00%		I3LA96              	100.00%
Bootstrap support for F6TDV1 as seed ortholog is 100%.
Bootstrap support for I3LA96 as seed ortholog is 100%.

Group of orthologs #4991. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.scrofa:74

H2XU83              	100.00%		F1RX93              	100.00%
Bootstrap support for H2XU83 as seed ortholog is 100%.
Bootstrap support for F1RX93 as seed ortholog is 100%.

Group of orthologs #4992. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 S.scrofa:74

H2XWU8              	100.00%		F1S179              	100.00%
Bootstrap support for H2XWU8 as seed ortholog is 80%.
Bootstrap support for F1S179 as seed ortholog is 100%.

Group of orthologs #4993. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.scrofa:74

F6Z524              	100.00%		I3L9P8              	100.00%
Bootstrap support for F6Z524 as seed ortholog is 100%.
Bootstrap support for I3L9P8 as seed ortholog is 100%.

Group of orthologs #4994. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 S.scrofa:74

F6V2R4              	100.00%		I3LQ86              	100.00%
Bootstrap support for F6V2R4 as seed ortholog is 100%.
Bootstrap support for I3LQ86 as seed ortholog is 100%.

Group of orthologs #4995. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 S.scrofa:74

F6UFX8              	100.00%		I3LUI4              	100.00%
Bootstrap support for F6UFX8 as seed ortholog is 71%.
Alternative seed ortholog is F6TTH0 (18 bits away from this cluster)
Bootstrap support for I3LUI4 as seed ortholog is 100%.

Group of orthologs #4996. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 S.scrofa:73

H2Y1A4              	100.00%		F1RSZ0              	100.00%
F6W615              	43.12%		
H2XN03              	37.71%		
H2Y2E0              	37.09%		
F6SJ97              	33.38%		
F6UKM1              	13.14%		
Bootstrap support for H2Y1A4 as seed ortholog is 64%.
Alternative seed ortholog is F6ZSL9 (12 bits away from this cluster)
Bootstrap support for F1RSZ0 as seed ortholog is 100%.

Group of orthologs #4997. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.scrofa:73

H2XT36              	100.00%		F1RS55              	100.00%
F7AK54              	100.00%		P12309              	100.00%
H2XZE7              	47.01%		F1RMF5              	76.06%
Bootstrap support for H2XT36 as seed ortholog is 100%.
Bootstrap support for F7AK54 as seed ortholog is 100%.
Bootstrap support for F1RS55 as seed ortholog is 100%.
Bootstrap support for P12309 as seed ortholog is 100%.

Group of orthologs #4998. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 S.scrofa:19

F6TCW5              	100.00%		F1RQ14              	100.00%
Bootstrap support for F6TCW5 as seed ortholog is 72%.
Alternative seed ortholog is H2Y3R6 (15 bits away from this cluster)
Bootstrap support for F1RQ14 as seed ortholog is 73%.
Alternative seed ortholog is I3LPC4 (19 bits away from this cluster)

Group of orthologs #4999. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.scrofa:73

F6SZB5              	100.00%		F1SPN6              	100.00%
Bootstrap support for F6SZB5 as seed ortholog is 100%.
Bootstrap support for F1SPN6 as seed ortholog is 100%.

Group of orthologs #5000. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.scrofa:73

F6X598              	100.00%		F1SGC6              	100.00%
Bootstrap support for F6X598 as seed ortholog is 100%.
Bootstrap support for F1SGC6 as seed ortholog is 100%.

Group of orthologs #5001. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.scrofa:8

F6ZE87              	100.00%		F1SEQ9              	100.00%
Bootstrap support for F6ZE87 as seed ortholog is 100%.
Bootstrap support for F1SEQ9 as seed ortholog is 51%.
Alternative seed ortholog is I3LV54 (8 bits away from this cluster)

Group of orthologs #5002. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 S.scrofa:73

H2XSN1              	100.00%		I3L734              	100.00%
Bootstrap support for H2XSN1 as seed ortholog is 100%.
Bootstrap support for I3L734 as seed ortholog is 100%.

Group of orthologs #5003. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:72

H2Y2W0              	100.00%		I3L9S5              	100.00%
H2XKL8              	47.26%		
H2XTT4              	30.82%		
H2XMD1              	30.48%		
H2Y3D0              	30.48%		
F6SQ89              	28.42%		
L7N0V0              	28.42%		
H2XNT9              	16.78%		
Bootstrap support for H2Y2W0 as seed ortholog is 100%.
Bootstrap support for I3L9S5 as seed ortholog is 100%.

Group of orthologs #5004. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:16

F7ACP0              	100.00%		F1RFK6              	100.00%
F6Z4Q2              	59.43%		F1RZA8              	54.14%
                    	       		F1SNX9              	50.46%
Bootstrap support for F7ACP0 as seed ortholog is 100%.
Bootstrap support for F1RFK6 as seed ortholog is 71%.
Alternative seed ortholog is O19063 (16 bits away from this cluster)

Group of orthologs #5005. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:72

F6QUI4              	100.00%		F1RTB4              	100.00%
                    	       		I3L9X4              	17.90%
Bootstrap support for F6QUI4 as seed ortholog is 100%.
Bootstrap support for F1RTB4 as seed ortholog is 100%.

Group of orthologs #5006. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:72

F6ZPP4              	100.00%		I3L6G6              	100.00%
                    	       		P13618              	61.54%
Bootstrap support for F6ZPP4 as seed ortholog is 100%.
Bootstrap support for I3L6G6 as seed ortholog is 100%.

Group of orthologs #5007. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:72

F6TNV5              	100.00%		F1RVA1              	100.00%
Bootstrap support for F6TNV5 as seed ortholog is 100%.
Bootstrap support for F1RVA1 as seed ortholog is 100%.

Group of orthologs #5008. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:72

F6RN20              	100.00%		F1S698              	100.00%
Bootstrap support for F6RN20 as seed ortholog is 100%.
Bootstrap support for F1S698 as seed ortholog is 100%.

Group of orthologs #5009. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:72

F6YV39              	100.00%		F1RZ95              	100.00%
Bootstrap support for F6YV39 as seed ortholog is 100%.
Bootstrap support for F1RZ95 as seed ortholog is 100%.

Group of orthologs #5010. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:72

F6ZKY0              	100.00%		F1SEA2              	100.00%
Bootstrap support for F6ZKY0 as seed ortholog is 100%.
Bootstrap support for F1SEA2 as seed ortholog is 100%.

Group of orthologs #5011. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:72

H2XY39              	100.00%		F1RRW7              	100.00%
Bootstrap support for H2XY39 as seed ortholog is 100%.
Bootstrap support for F1RRW7 as seed ortholog is 100%.

Group of orthologs #5012. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:72

F6WRI2              	100.00%		I3L7L2              	100.00%
Bootstrap support for F6WRI2 as seed ortholog is 100%.
Bootstrap support for I3L7L2 as seed ortholog is 100%.

Group of orthologs #5013. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:72

F6ZT56              	100.00%		F1SPM1              	100.00%
Bootstrap support for F6ZT56 as seed ortholog is 100%.
Bootstrap support for F1SPM1 as seed ortholog is 100%.

Group of orthologs #5014. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:72

F6XFL7              	100.00%		I3LB17              	100.00%
Bootstrap support for F6XFL7 as seed ortholog is 100%.
Bootstrap support for I3LB17 as seed ortholog is 100%.

Group of orthologs #5015. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:4

F6YHK2              	100.00%		I3LA79              	100.00%
Bootstrap support for F6YHK2 as seed ortholog is 87%.
Bootstrap support for I3LA79 as seed ortholog is 55%.
Alternative seed ortholog is F1SH48 (4 bits away from this cluster)

Group of orthologs #5016. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:32

F6Q9R4              	100.00%		Q4VYA0              	100.00%
Bootstrap support for F6Q9R4 as seed ortholog is 100%.
Bootstrap support for Q4VYA0 as seed ortholog is 88%.

Group of orthologs #5017. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 S.scrofa:72

H2XKV0              	100.00%		I3LMA1              	100.00%
Bootstrap support for H2XKV0 as seed ortholog is 100%.
Bootstrap support for I3LMA1 as seed ortholog is 100%.

Group of orthologs #5018. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.scrofa:71

F7BCF2              	100.00%		I3L5K2              	100.00%
                    	       		F1S071              	42.18%
                    	       		F1S059              	36.87%
                    	       		F1SSA0              	31.86%
Bootstrap support for F7BCF2 as seed ortholog is 100%.
Bootstrap support for I3L5K2 as seed ortholog is 100%.

Group of orthologs #5019. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 S.scrofa:17

H2XX84              	100.00%		Q29003              	100.00%
H2Y1F4              	31.39%		
F6Y1E2              	9.12%		
L7N0Q2              	5.11%		
Bootstrap support for H2XX84 as seed ortholog is 56%.
Alternative seed ortholog is H2XRM8 (4 bits away from this cluster)
Bootstrap support for Q29003 as seed ortholog is 79%.

Group of orthologs #5020. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.scrofa:71

F6V9P3              	100.00%		I3LPA1              	100.00%
                    	       		F1RLR3              	19.80%
Bootstrap support for F6V9P3 as seed ortholog is 100%.
Bootstrap support for I3LPA1 as seed ortholog is 100%.

Group of orthologs #5021. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 S.scrofa:71

H2Y1S4              	100.00%		I3LP03              	100.00%
H2XQP5              	27.36%		
Bootstrap support for H2Y1S4 as seed ortholog is 67%.
Alternative seed ortholog is H2XTP0 (10 bits away from this cluster)
Bootstrap support for I3LP03 as seed ortholog is 100%.

Group of orthologs #5022. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.scrofa:71

F6QNG1              	100.00%		F1RFY8              	100.00%
Bootstrap support for F6QNG1 as seed ortholog is 100%.
Bootstrap support for F1RFY8 as seed ortholog is 100%.

Group of orthologs #5023. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:19

F6YG77              	100.00%		F1RZN8              	100.00%
Bootstrap support for F6YG77 as seed ortholog is 91%.
Bootstrap support for F1RZN8 as seed ortholog is 86%.

Group of orthologs #5024. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.scrofa:71

H2XR11              	100.00%		F1RPP2              	100.00%
Bootstrap support for H2XR11 as seed ortholog is 100%.
Bootstrap support for F1RPP2 as seed ortholog is 100%.

Group of orthologs #5025. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.scrofa:71

F7A573              	100.00%		F1SJD1              	100.00%
Bootstrap support for F7A573 as seed ortholog is 100%.
Bootstrap support for F1SJD1 as seed ortholog is 100%.

Group of orthologs #5026. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.scrofa:71

F6X505              	100.00%		I3LE73              	100.00%
Bootstrap support for F6X505 as seed ortholog is 100%.
Bootstrap support for I3LE73 as seed ortholog is 100%.

Group of orthologs #5027. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 S.scrofa:71

H2XJV8              	100.00%		I3LIA8              	100.00%
Bootstrap support for H2XJV8 as seed ortholog is 100%.
Bootstrap support for I3LIA8 as seed ortholog is 100%.

Group of orthologs #5028. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 S.scrofa:70

H2XPH1              	100.00%		I3LQC6              	100.00%
                    	       		I3LG66              	21.75%
Bootstrap support for H2XPH1 as seed ortholog is 100%.
Bootstrap support for I3LQC6 as seed ortholog is 100%.

Group of orthologs #5029. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 S.scrofa:70

F6TY64              	100.00%		F1RUM5              	100.00%
Bootstrap support for F6TY64 as seed ortholog is 100%.
Bootstrap support for F1RUM5 as seed ortholog is 100%.

Group of orthologs #5030. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 S.scrofa:70

F7BEL6              	100.00%		F1SA12              	100.00%
Bootstrap support for F7BEL6 as seed ortholog is 100%.
Bootstrap support for F1SA12 as seed ortholog is 100%.

Group of orthologs #5031. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 S.scrofa:5

H2XU58              	100.00%		I3LDY3              	100.00%
Bootstrap support for H2XU58 as seed ortholog is 100%.
Bootstrap support for I3LDY3 as seed ortholog is 62%.
Alternative seed ortholog is F1S9Y6 (5 bits away from this cluster)

Group of orthologs #5032. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 S.scrofa:69

F6SH91              	100.00%		I3LKN0              	100.00%
                    	       		I3L5Q5              	91.67%
                    	       		I3LFM7              	12.50%
Bootstrap support for F6SH91 as seed ortholog is 85%.
Bootstrap support for I3LKN0 as seed ortholog is 100%.

Group of orthologs #5033. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:69

H2XTV7              	100.00%		I3LQ76              	100.00%
                    	       		F1SD24              	36.08%
                    	       		F1SD33              	22.68%
Bootstrap support for H2XTV7 as seed ortholog is 100%.
Bootstrap support for I3LQ76 as seed ortholog is 100%.

Group of orthologs #5034. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:69

F6SL18              	100.00%		I3LCN0              	100.00%
F6YRM0              	6.12%		
Bootstrap support for F6SL18 as seed ortholog is 100%.
Bootstrap support for I3LCN0 as seed ortholog is 100%.

Group of orthologs #5035. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:69

H2XYA3              	100.00%		F1SJ31              	100.00%
F6TDG4              	44.92%		
Bootstrap support for H2XYA3 as seed ortholog is 100%.
Bootstrap support for F1SJ31 as seed ortholog is 100%.

Group of orthologs #5036. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:69

H2XQL0              	100.00%		F1RF51              	100.00%
Bootstrap support for H2XQL0 as seed ortholog is 100%.
Bootstrap support for F1RF51 as seed ortholog is 100%.

Group of orthologs #5037. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:69

F6Z4I8              	100.00%		F1S1M5              	100.00%
Bootstrap support for F6Z4I8 as seed ortholog is 100%.
Bootstrap support for F1S1M5 as seed ortholog is 100%.

Group of orthologs #5038. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:69

H2XLM7              	100.00%		F1RR99              	100.00%
Bootstrap support for H2XLM7 as seed ortholog is 100%.
Bootstrap support for F1RR99 as seed ortholog is 100%.

Group of orthologs #5039. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:69

F6ZL23              	100.00%		F1SQE1              	100.00%
Bootstrap support for F6ZL23 as seed ortholog is 100%.
Bootstrap support for F1SQE1 as seed ortholog is 100%.

Group of orthologs #5040. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:69

H2XTV9              	100.00%		F1S829              	100.00%
Bootstrap support for H2XTV9 as seed ortholog is 100%.
Bootstrap support for F1S829 as seed ortholog is 100%.

Group of orthologs #5041. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 S.scrofa:69

H2XLR3              	100.00%		Q29307              	100.00%
Bootstrap support for H2XLR3 as seed ortholog is 100%.
Bootstrap support for Q29307 as seed ortholog is 100%.

Group of orthologs #5042. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.scrofa:20

F6S3X8              	100.00%		I3L634              	100.00%
                    	       		I3LLL1              	10.26%
Bootstrap support for F6S3X8 as seed ortholog is 100%.
Bootstrap support for I3L634 as seed ortholog is 55%.
Alternative seed ortholog is F1RYW3 (20 bits away from this cluster)

Group of orthologs #5043. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.scrofa:68

H2XQ07              	100.00%		F1SK27              	100.00%
                    	       		I3LS25              	32.08%
Bootstrap support for H2XQ07 as seed ortholog is 100%.
Bootstrap support for F1SK27 as seed ortholog is 100%.

Group of orthologs #5044. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.scrofa:68

F6TUG7              	100.00%		Q29259              	100.00%
                    	       		Q2EN80              	94.55%
Bootstrap support for F6TUG7 as seed ortholog is 100%.
Bootstrap support for Q29259 as seed ortholog is 100%.

Group of orthologs #5045. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.scrofa:68

F6QIW3              	100.00%		I3LQU1              	100.00%
Bootstrap support for F6QIW3 as seed ortholog is 100%.
Bootstrap support for I3LQU1 as seed ortholog is 100%.

Group of orthologs #5046. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 S.scrofa:68

F7BM33              	100.00%		I3LMZ4              	100.00%
Bootstrap support for F7BM33 as seed ortholog is 100%.
Bootstrap support for I3LMZ4 as seed ortholog is 100%.

Group of orthologs #5047. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.scrofa:67

F6SWF0              	100.00%		F1S3R9              	100.00%
                    	       		F1RTB1              	9.89%
                    	       		F1STT6              	7.57%
Bootstrap support for F6SWF0 as seed ortholog is 100%.
Bootstrap support for F1S3R9 as seed ortholog is 100%.

Group of orthologs #5048. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 S.scrofa:67

F6T7K5              	100.00%		I3LRH5              	100.00%
F6T7L2              	18.90%		
H2Y2X3              	17.73%		
Bootstrap support for F6T7K5 as seed ortholog is 80%.
Bootstrap support for I3LRH5 as seed ortholog is 100%.

Group of orthologs #5049. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.scrofa:67

F6U2Y7              	100.00%		Q06AS9              	100.00%
                    	       		F1RGQ2              	18.70%
                    	       		F1S6R0              	13.28%
Bootstrap support for F6U2Y7 as seed ortholog is 100%.
Bootstrap support for Q06AS9 as seed ortholog is 100%.

Group of orthologs #5050. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.scrofa:67

F6U568              	100.00%		F1SEA8              	100.00%
                    	       		I6L6A9              	72.48%
Bootstrap support for F6U568 as seed ortholog is 100%.
Bootstrap support for F1SEA8 as seed ortholog is 100%.

Group of orthologs #5051. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 S.scrofa:67

F6SAZ7              	100.00%		F1SRQ2              	100.00%
                    	       		I3LII2              	20.68%
Bootstrap support for F6SAZ7 as seed ortholog is 85%.
Bootstrap support for F1SRQ2 as seed ortholog is 100%.

Group of orthologs #5052. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.scrofa:67

F6YW14              	100.00%		F1S903              	100.00%
Bootstrap support for F6YW14 as seed ortholog is 100%.
Bootstrap support for F1S903 as seed ortholog is 100%.

Group of orthologs #5053. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.scrofa:67

F6U1J3              	100.00%		P02703              	100.00%
Bootstrap support for F6U1J3 as seed ortholog is 100%.
Bootstrap support for P02703 as seed ortholog is 100%.

Group of orthologs #5054. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.scrofa:67

H2XK66              	100.00%		I3LCH5              	100.00%
Bootstrap support for H2XK66 as seed ortholog is 100%.
Bootstrap support for I3LCH5 as seed ortholog is 100%.

Group of orthologs #5055. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.scrofa:67

H2XJH9              	100.00%		I3LFZ2              	100.00%
Bootstrap support for H2XJH9 as seed ortholog is 100%.
Bootstrap support for I3LFZ2 as seed ortholog is 100%.

Group of orthologs #5056. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.scrofa:67

H2Y0I8              	100.00%		F2Z5W6              	100.00%
Bootstrap support for H2Y0I8 as seed ortholog is 100%.
Bootstrap support for F2Z5W6 as seed ortholog is 100%.

Group of orthologs #5057. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.scrofa:67

H2XPF9              	100.00%		I3LK93              	100.00%
Bootstrap support for H2XPF9 as seed ortholog is 100%.
Bootstrap support for I3LK93 as seed ortholog is 100%.

Group of orthologs #5058. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 S.scrofa:67

Q8HIN1              	100.00%		O79880              	100.00%
Bootstrap support for Q8HIN1 as seed ortholog is 100%.
Bootstrap support for O79880 as seed ortholog is 100%.

Group of orthologs #5059. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 S.scrofa:66

F6Z4J5              	100.00%		F1SHP9              	100.00%
F6Z4P5              	11.54%		I3LDP3              	30.72%
F6XAV8              	9.89%		
Bootstrap support for F6Z4J5 as seed ortholog is 56%.
Alternative seed ortholog is H2XU92 (14 bits away from this cluster)
Bootstrap support for F1SHP9 as seed ortholog is 100%.

Group of orthologs #5060. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.scrofa:66

H2XXU6              	100.00%		F1SHT7              	100.00%
                    	       		I3LNU5              	13.37%
                    	       		F1RWG4              	5.90%
Bootstrap support for H2XXU6 as seed ortholog is 100%.
Bootstrap support for F1SHT7 as seed ortholog is 100%.

Group of orthologs #5061. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.scrofa:66

F6ZTS3              	100.00%		F1SLA8              	100.00%
                    	       		I3LUE6              	46.93%
Bootstrap support for F6ZTS3 as seed ortholog is 100%.
Bootstrap support for F1SLA8 as seed ortholog is 100%.

Group of orthologs #5062. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.scrofa:66

F6RZL7              	100.00%		I3LJK4              	100.00%
                    	       		F1STU5              	9.39%
Bootstrap support for F6RZL7 as seed ortholog is 100%.
Bootstrap support for I3LJK4 as seed ortholog is 100%.

Group of orthologs #5063. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.scrofa:66

F6TV42              	100.00%		F1SE99              	100.00%
Bootstrap support for F6TV42 as seed ortholog is 100%.
Bootstrap support for F1SE99 as seed ortholog is 100%.

Group of orthologs #5064. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.scrofa:66

H2XMT5              	100.00%		F1RI18              	100.00%
Bootstrap support for H2XMT5 as seed ortholog is 100%.
Bootstrap support for F1RI18 as seed ortholog is 100%.

Group of orthologs #5065. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.scrofa:66

F6YF45              	100.00%		F2Z4Y0              	100.00%
Bootstrap support for F6YF45 as seed ortholog is 100%.
Bootstrap support for F2Z4Y0 as seed ortholog is 100%.

Group of orthologs #5066. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.scrofa:66

H2Y196              	100.00%		F1SQW8              	100.00%
Bootstrap support for H2Y196 as seed ortholog is 100%.
Bootstrap support for F1SQW8 as seed ortholog is 100%.

Group of orthologs #5067. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 S.scrofa:66

H2XLU3              	100.00%		I3LIE4              	100.00%
Bootstrap support for H2XLU3 as seed ortholog is 100%.
Bootstrap support for I3LIE4 as seed ortholog is 100%.

Group of orthologs #5068. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.scrofa:65

F6U302              	100.00%		F1RGQ3              	100.00%
F6WPE8              	32.37%		
Q4H3M1              	10.52%		
Bootstrap support for F6U302 as seed ortholog is 100%.
Bootstrap support for F1RGQ3 as seed ortholog is 100%.

Group of orthologs #5069. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.scrofa:8

Q6L5M5              	100.00%		I3LIK4              	100.00%
Q6L5M6              	7.39%		
Bootstrap support for Q6L5M5 as seed ortholog is 100%.
Bootstrap support for I3LIK4 as seed ortholog is 64%.
Alternative seed ortholog is F1RL92 (8 bits away from this cluster)

Group of orthologs #5070. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.scrofa:65

F6QP81              	100.00%		F1SK37              	100.00%
Bootstrap support for F6QP81 as seed ortholog is 100%.
Bootstrap support for F1SK37 as seed ortholog is 100%.

Group of orthologs #5071. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.scrofa:12

H2XMZ4              	100.00%		F1RL19              	100.00%
Bootstrap support for H2XMZ4 as seed ortholog is 100%.
Bootstrap support for F1RL19 as seed ortholog is 68%.
Alternative seed ortholog is K7GSX7 (12 bits away from this cluster)

Group of orthologs #5072. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.scrofa:65

H2XMK0              	100.00%		F1RUX5              	100.00%
Bootstrap support for H2XMK0 as seed ortholog is 100%.
Bootstrap support for F1RUX5 as seed ortholog is 100%.

Group of orthologs #5073. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.scrofa:65

F6UNZ9              	100.00%		I3LF96              	100.00%
Bootstrap support for F6UNZ9 as seed ortholog is 100%.
Bootstrap support for I3LF96 as seed ortholog is 100%.

Group of orthologs #5074. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 S.scrofa:65

H2XYB2              	100.00%		I3LAH2              	100.00%
Bootstrap support for H2XYB2 as seed ortholog is 100%.
Bootstrap support for I3LAH2 as seed ortholog is 100%.

Group of orthologs #5075. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.scrofa:64

F7B1I9              	100.00%		Q03472              	100.00%
H2XUJ5              	6.32%		F1S0J1              	94.55%
H2XWN3              	5.93%		I3LKJ7              	46.32%
Bootstrap support for F7B1I9 as seed ortholog is 100%.
Bootstrap support for Q03472 as seed ortholog is 100%.

Group of orthologs #5076. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.scrofa:13

H2Y1D3              	100.00%		F1RLA4              	100.00%
                    	       		Q7YR83              	25.06%
Bootstrap support for H2Y1D3 as seed ortholog is 100%.
Bootstrap support for F1RLA4 as seed ortholog is 70%.
Alternative seed ortholog is P80964 (13 bits away from this cluster)

Group of orthologs #5077. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.scrofa:18

F6TXK6              	100.00%		F1RIM0              	100.00%
Bootstrap support for F6TXK6 as seed ortholog is 100%.
Bootstrap support for F1RIM0 as seed ortholog is 75%.

Group of orthologs #5078. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.scrofa:64

H2XQ44              	100.00%		F1S3W7              	100.00%
Bootstrap support for H2XQ44 as seed ortholog is 100%.
Bootstrap support for F1S3W7 as seed ortholog is 100%.

Group of orthologs #5079. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.scrofa:64

H2XW71              	100.00%		F1S5K1              	100.00%
Bootstrap support for H2XW71 as seed ortholog is 100%.
Bootstrap support for F1S5K1 as seed ortholog is 100%.

Group of orthologs #5080. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.scrofa:64

H2XTY0              	100.00%		F1SA06              	100.00%
Bootstrap support for H2XTY0 as seed ortholog is 100%.
Bootstrap support for F1SA06 as seed ortholog is 100%.

Group of orthologs #5081. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.scrofa:64

H2XWB7              	100.00%		F1SDK6              	100.00%
Bootstrap support for H2XWB7 as seed ortholog is 100%.
Bootstrap support for F1SDK6 as seed ortholog is 100%.

Group of orthologs #5082. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.scrofa:64

H2XKC6              	100.00%		I3LGE8              	100.00%
Bootstrap support for H2XKC6 as seed ortholog is 100%.
Bootstrap support for I3LGE8 as seed ortholog is 100%.

Group of orthologs #5083. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.scrofa:64

H2XXK2              	100.00%		I3L7P7              	100.00%
Bootstrap support for H2XXK2 as seed ortholog is 100%.
Bootstrap support for I3L7P7 as seed ortholog is 100%.

Group of orthologs #5084. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 S.scrofa:22

H2XY84              	100.00%		I3LSP3              	100.00%
Bootstrap support for H2XY84 as seed ortholog is 100%.
Bootstrap support for I3LSP3 as seed ortholog is 92%.

Group of orthologs #5085. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.scrofa:63

F6SS40              	100.00%		I3L9J0              	100.00%
                    	       		I3LQ65              	100.00%
Bootstrap support for F6SS40 as seed ortholog is 100%.
Bootstrap support for I3L9J0 as seed ortholog is 100%.
Bootstrap support for I3LQ65 as seed ortholog is 100%.

Group of orthologs #5086. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.scrofa:63

F7BER6              	100.00%		F1RNI2              	100.00%
Bootstrap support for F7BER6 as seed ortholog is 100%.
Bootstrap support for F1RNI2 as seed ortholog is 100%.

Group of orthologs #5087. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.scrofa:4

F6QPK2              	100.00%		I3LC62              	100.00%
Bootstrap support for F6QPK2 as seed ortholog is 100%.
Bootstrap support for I3LC62 as seed ortholog is 59%.
Alternative seed ortholog is F1RMW1 (4 bits away from this cluster)

Group of orthologs #5088. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.scrofa:63

H2XPC0              	100.00%		I3L8F4              	100.00%
Bootstrap support for H2XPC0 as seed ortholog is 100%.
Bootstrap support for I3L8F4 as seed ortholog is 100%.

Group of orthologs #5089. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 S.scrofa:63

H2XQJ1              	100.00%		I3LV24              	100.00%
Bootstrap support for H2XQJ1 as seed ortholog is 100%.
Bootstrap support for I3LV24 as seed ortholog is 100%.

Group of orthologs #5090. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 S.scrofa:17

H2XQR3              	100.00%		I3LKQ1              	100.00%
                    	       		I3LJ42              	40.54%
                    	       		F1SEX7              	39.19%
                    	       		I3LM81              	25.68%
                    	       		F1SNC2              	6.76%
Bootstrap support for H2XQR3 as seed ortholog is 65%.
Alternative seed ortholog is H2XXW5 (6 bits away from this cluster)
Bootstrap support for I3LKQ1 as seed ortholog is 86%.

Group of orthologs #5091. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:62

H2XYZ9              	100.00%		P21753              	100.00%
                    	       		Q95274              	100.00%
                    	       		I3LIY7              	46.43%
                    	       		F1RYF1              	28.57%
                    	       		I3LAC8              	25.00%
Bootstrap support for H2XYZ9 as seed ortholog is 100%.
Bootstrap support for P21753 as seed ortholog is 100%.
Bootstrap support for Q95274 as seed ortholog is 100%.

Group of orthologs #5092. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 S.scrofa:62

F6QL27              	100.00%		Q07287              	100.00%
F6Y8B5              	8.87%		
F6R3R2              	8.87%		
F6U1C0              	6.00%		
Bootstrap support for F6QL27 as seed ortholog is 50%.
Alternative seed ortholog is H2XVJ6 (2 bits away from this cluster)
Bootstrap support for Q07287 as seed ortholog is 100%.

Group of orthologs #5093. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:62

F7B7M7              	100.00%		F1RQY5              	100.00%
                    	       		I3L570              	42.93%
Bootstrap support for F7B7M7 as seed ortholog is 100%.
Bootstrap support for F1RQY5 as seed ortholog is 100%.

Group of orthologs #5094. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 S.scrofa:10

F6T2V4              	100.00%		I3LKS8              	100.00%
                    	       		I3LHF2              	11.94%
Bootstrap support for F6T2V4 as seed ortholog is 87%.
Bootstrap support for I3LKS8 as seed ortholog is 74%.
Alternative seed ortholog is F1RMR7 (10 bits away from this cluster)

Group of orthologs #5095. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:62

F6PQJ9              	100.00%		F1S7Q7              	100.00%
Bootstrap support for F6PQJ9 as seed ortholog is 100%.
Bootstrap support for F1S7Q7 as seed ortholog is 100%.

Group of orthologs #5096. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:62

F6WHK6              	100.00%		F1S031              	100.00%
Bootstrap support for F6WHK6 as seed ortholog is 100%.
Bootstrap support for F1S031 as seed ortholog is 100%.

Group of orthologs #5097. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:62

F7B349              	100.00%		F1RMR6              	100.00%
Bootstrap support for F7B349 as seed ortholog is 100%.
Bootstrap support for F1RMR6 as seed ortholog is 100%.

Group of orthologs #5098. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:62

F6UJL1              	100.00%		I3LPU5              	100.00%
Bootstrap support for F6UJL1 as seed ortholog is 100%.
Bootstrap support for I3LPU5 as seed ortholog is 100%.

Group of orthologs #5099. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 S.scrofa:62

H2XU21              	100.00%		F1SKU4              	100.00%
Bootstrap support for H2XU21 as seed ortholog is 46%.
Alternative seed ortholog is F6YVB1 (4 bits away from this cluster)
Bootstrap support for F1SKU4 as seed ortholog is 100%.

Group of orthologs #5100. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:20

F6Y6A4              	100.00%		I3LMN9              	100.00%
Bootstrap support for F6Y6A4 as seed ortholog is 100%.
Bootstrap support for I3LMN9 as seed ortholog is 82%.

Group of orthologs #5101. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:62

H2XRG9              	100.00%		I3L9G5              	100.00%
Bootstrap support for H2XRG9 as seed ortholog is 100%.
Bootstrap support for I3L9G5 as seed ortholog is 100%.

Group of orthologs #5102. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:62

H2XPR8              	100.00%		I3LEF3              	100.00%
Bootstrap support for H2XPR8 as seed ortholog is 100%.
Bootstrap support for I3LEF3 as seed ortholog is 100%.

Group of orthologs #5103. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:62

H2XZ14              	100.00%		I3LHE3              	100.00%
Bootstrap support for H2XZ14 as seed ortholog is 100%.
Bootstrap support for I3LHE3 as seed ortholog is 100%.

Group of orthologs #5104. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:62

H2Y286              	100.00%		I3LG22              	100.00%
Bootstrap support for H2Y286 as seed ortholog is 100%.
Bootstrap support for I3LG22 as seed ortholog is 100%.

Group of orthologs #5105. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 S.scrofa:62

H2XXJ7              	100.00%		I3LNR5              	100.00%
Bootstrap support for H2XXJ7 as seed ortholog is 100%.
Bootstrap support for I3LNR5 as seed ortholog is 100%.

Group of orthologs #5106. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:61

F6X3Y1              	100.00%		F1S4E5              	100.00%
                    	       		F1RR61              	51.59%
                    	       		F1S4E4              	47.99%
                    	       		F1SA81              	45.17%
                    	       		F1S4E3              	42.41%
Bootstrap support for F6X3Y1 as seed ortholog is 100%.
Bootstrap support for F1S4E5 as seed ortholog is 100%.

Group of orthologs #5107. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:61

H2XUR3              	100.00%		Q5G6V9              	100.00%
                    	       		P10668              	78.15%
                    	       		P60982              	62.59%
Bootstrap support for H2XUR3 as seed ortholog is 100%.
Bootstrap support for Q5G6V9 as seed ortholog is 100%.

Group of orthologs #5108. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 S.scrofa:12

F6V259              	100.00%		B3FVQ2              	100.00%
                    	       		B8R2Z9              	8.77%
Bootstrap support for F6V259 as seed ortholog is 68%.
Alternative seed ortholog is H2XSC4 (13 bits away from this cluster)
Bootstrap support for B3FVQ2 as seed ortholog is 65%.
Alternative seed ortholog is F1SRC8 (12 bits away from this cluster)

Group of orthologs #5109. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:61

F6PML6              	100.00%		F1S465              	100.00%
                    	       		I3LL47              	100.00%
Bootstrap support for F6PML6 as seed ortholog is 100%.
Bootstrap support for F1S465 as seed ortholog is 100%.
Bootstrap support for I3LL47 as seed ortholog is 100%.

Group of orthologs #5110. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:61

F6T9K3              	100.00%		F1SPK2              	100.00%
                    	       		I3LTA0              	25.53%
Bootstrap support for F6T9K3 as seed ortholog is 100%.
Bootstrap support for F1SPK2 as seed ortholog is 100%.

Group of orthologs #5111. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:61

H2XXA5              	100.00%		I3LLA6              	100.00%
F6RH28              	19.44%		
Bootstrap support for H2XXA5 as seed ortholog is 100%.
Bootstrap support for I3LLA6 as seed ortholog is 100%.

Group of orthologs #5112. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:8

F7AGA2              	100.00%		F1RRE1              	100.00%
Bootstrap support for F7AGA2 as seed ortholog is 100%.
Bootstrap support for F1RRE1 as seed ortholog is 62%.
Alternative seed ortholog is F1RW43 (8 bits away from this cluster)

Group of orthologs #5113. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:61

F6QDF2              	100.00%		F1SRB5              	100.00%
Bootstrap support for F6QDF2 as seed ortholog is 100%.
Bootstrap support for F1SRB5 as seed ortholog is 100%.

Group of orthologs #5114. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:61

F6ZLG3              	100.00%		I3L8Q8              	100.00%
Bootstrap support for F6ZLG3 as seed ortholog is 100%.
Bootstrap support for I3L8Q8 as seed ortholog is 100%.

Group of orthologs #5115. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:61

H2XP03              	100.00%		I3LG30              	100.00%
Bootstrap support for H2XP03 as seed ortholog is 100%.
Bootstrap support for I3LG30 as seed ortholog is 100%.

Group of orthologs #5116. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 S.scrofa:14

H2XY41              	100.00%		I3LB92              	100.00%
Bootstrap support for H2XY41 as seed ortholog is 100%.
Bootstrap support for I3LB92 as seed ortholog is 67%.
Alternative seed ortholog is I3LSE5 (14 bits away from this cluster)

Group of orthologs #5117. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 S.scrofa:18

F7B8E2              	100.00%		K7GLH3              	100.00%
Bootstrap support for F7B8E2 as seed ortholog is 83%.
Bootstrap support for K7GLH3 as seed ortholog is 79%.

Group of orthologs #5118. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.scrofa:60

H2XX60              	100.00%		I3L786              	100.00%
F6TUQ2              	29.56%		
H2XUX5              	21.56%		
Bootstrap support for H2XX60 as seed ortholog is 100%.
Bootstrap support for I3L786 as seed ortholog is 100%.

Group of orthologs #5119. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.scrofa:60

F7AN63              	100.00%		F1SN29              	100.00%
                    	       		F1SSC8              	36.72%
Bootstrap support for F7AN63 as seed ortholog is 100%.
Bootstrap support for F1SN29 as seed ortholog is 100%.

Group of orthologs #5120. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.scrofa:60

F6SC91              	100.00%		F1RVF8              	100.00%
Bootstrap support for F6SC91 as seed ortholog is 100%.
Bootstrap support for F1RVF8 as seed ortholog is 100%.

Group of orthologs #5121. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 S.scrofa:60

H2XWL1              	100.00%		I3LVP2              	100.00%
Bootstrap support for H2XWL1 as seed ortholog is 100%.
Bootstrap support for I3LVP2 as seed ortholog is 100%.

Group of orthologs #5122. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.scrofa:59

F6UKH7              	100.00%		F1S8I3              	100.00%
                    	       		F1S0B0              	32.60%
                    	       		I3LTK6              	11.03%
Bootstrap support for F6UKH7 as seed ortholog is 100%.
Bootstrap support for F1S8I3 as seed ortholog is 100%.

Group of orthologs #5123. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.scrofa:59

F6XV01              	100.00%		F1S0A5              	100.00%
                    	       		F1S0A4              	81.82%
Bootstrap support for F6XV01 as seed ortholog is 100%.
Bootstrap support for F1S0A5 as seed ortholog is 100%.

Group of orthologs #5124. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.scrofa:59

H2XPU3              	100.00%		P81693              	100.00%
                    	       		F1S9H9              	67.78%
Bootstrap support for H2XPU3 as seed ortholog is 100%.
Bootstrap support for P81693 as seed ortholog is 100%.

Group of orthologs #5125. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 S.scrofa:59

F7AXH3              	100.00%		F1SCJ3              	100.00%
Bootstrap support for F7AXH3 as seed ortholog is 100%.
Bootstrap support for F1SCJ3 as seed ortholog is 100%.

Group of orthologs #5126. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.scrofa:58

H2XUR5              	100.00%		I3LDB8              	100.00%
F6XSJ3              	13.99%		
F6ZUG2              	13.58%		
F6PRB0              	12.76%		
F6QHI6              	12.35%		
H2XXM8              	12.35%		
H2Y192              	11.93%		
F6YBI0              	9.88%		
F6SJG5              	7.82%		
H2XVR0              	5.35%		
Bootstrap support for H2XUR5 as seed ortholog is 100%.
Bootstrap support for I3LDB8 as seed ortholog is 100%.

Group of orthologs #5127. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.scrofa:58

H2XYC4              	100.00%		F1RKI1              	100.00%
                    	       		F2Z5L9              	5.13%
Bootstrap support for H2XYC4 as seed ortholog is 100%.
Bootstrap support for F1RKI1 as seed ortholog is 100%.

Group of orthologs #5128. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.scrofa:58

F6TH49              	100.00%		I3LJB0              	100.00%
                    	       		I3LAV6              	15.59%
Bootstrap support for F6TH49 as seed ortholog is 100%.
Bootstrap support for I3LJB0 as seed ortholog is 100%.

Group of orthologs #5129. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.scrofa:58

F6Y3C9              	100.00%		F1S0V7              	100.00%
Bootstrap support for F6Y3C9 as seed ortholog is 100%.
Bootstrap support for F1S0V7 as seed ortholog is 100%.

Group of orthologs #5130. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.scrofa:58

F6XD13              	100.00%		F1SBU2              	100.00%
Bootstrap support for F6XD13 as seed ortholog is 100%.
Bootstrap support for F1SBU2 as seed ortholog is 100%.

Group of orthologs #5131. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.scrofa:58

H2XKW6              	100.00%		F1RYX1              	100.00%
Bootstrap support for H2XKW6 as seed ortholog is 100%.
Bootstrap support for F1RYX1 as seed ortholog is 100%.

Group of orthologs #5132. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 S.scrofa:58

H2XL17              	100.00%		F1SGH8              	100.00%
Bootstrap support for H2XL17 as seed ortholog is 100%.
Bootstrap support for F1SGH8 as seed ortholog is 100%.

Group of orthologs #5133. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 S.scrofa:58

H2Y374              	100.00%		I3LIU4              	100.00%
Bootstrap support for H2Y374 as seed ortholog is 42%.
Alternative seed ortholog is H2XVP3 (2 bits away from this cluster)
Bootstrap support for I3LIU4 as seed ortholog is 100%.

Group of orthologs #5134. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.scrofa:57

F6Q1U9              	100.00%		F1RF46              	100.00%
                    	       		I3LLB6              	49.32%
                    	       		B8YM31              	7.94%
Bootstrap support for F6Q1U9 as seed ortholog is 100%.
Bootstrap support for F1RF46 as seed ortholog is 100%.

Group of orthologs #5135. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.scrofa:57

H2XQX7              	100.00%		F1SQH9              	100.00%
                    	       		I3LCX6              	100.00%
Bootstrap support for H2XQX7 as seed ortholog is 100%.
Bootstrap support for F1SQH9 as seed ortholog is 100%.
Bootstrap support for I3LCX6 as seed ortholog is 100%.

Group of orthologs #5136. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 S.scrofa:1

F6WDS6              	100.00%		Q06AT9              	100.00%
                    	       		F1RUT1              	78.69%
Bootstrap support for F6WDS6 as seed ortholog is 60%.
Alternative seed ortholog is F6TNN9 (9 bits away from this cluster)
Bootstrap support for Q06AT9 as seed ortholog is 76%.

Group of orthologs #5137. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.scrofa:57

H2XKP2              	100.00%		Q66X52              	100.00%
                    	       		F1S622              	96.06%
Bootstrap support for H2XKP2 as seed ortholog is 100%.
Bootstrap support for Q66X52 as seed ortholog is 100%.

Group of orthologs #5138. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.scrofa:57

F7B1S6              	100.00%		F1RIU0              	100.00%
Bootstrap support for F7B1S6 as seed ortholog is 100%.
Bootstrap support for F1RIU0 as seed ortholog is 100%.

Group of orthologs #5139. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.scrofa:57

F6S720              	100.00%		I3LIW7              	100.00%
Bootstrap support for F6S720 as seed ortholog is 100%.
Bootstrap support for I3LIW7 as seed ortholog is 100%.

Group of orthologs #5140. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.scrofa:57

H2XQP0              	100.00%		F1SHG2              	100.00%
Bootstrap support for H2XQP0 as seed ortholog is 100%.
Bootstrap support for F1SHG2 as seed ortholog is 100%.

Group of orthologs #5141. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.scrofa:57

F6WIE6              	100.00%		I3LJV8              	100.00%
Bootstrap support for F6WIE6 as seed ortholog is 100%.
Bootstrap support for I3LJV8 as seed ortholog is 100%.

Group of orthologs #5142. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 S.scrofa:57

H2XVU9              	100.00%		I3L7C1              	100.00%
Bootstrap support for H2XVU9 as seed ortholog is 100%.
Bootstrap support for I3L7C1 as seed ortholog is 100%.

Group of orthologs #5143. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 S.scrofa:57

H2XP19              	100.00%		I3LR23              	100.00%
Bootstrap support for H2XP19 as seed ortholog is 60%.
Alternative seed ortholog is F6TBV6 (7 bits away from this cluster)
Bootstrap support for I3LR23 as seed ortholog is 100%.

Group of orthologs #5144. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.scrofa:56

F6UE95              	100.00%		I3L5V3              	100.00%
                    	       		I3LLB5              	100.00%
                    	       		I3LUL1              	13.11%
                    	       		Q9GL76              	10.16%
                    	       		F1S9T5              	8.52%
                    	       		B3TFD9              	6.98%
                    	       		F1RMT1              	6.47%
Bootstrap support for F6UE95 as seed ortholog is 100%.
Bootstrap support for I3L5V3 as seed ortholog is 100%.
Bootstrap support for I3LLB5 as seed ortholog is 100%.

Group of orthologs #5145. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 S.scrofa:56

F6QFD6              	100.00%		K7GMF4              	100.00%
F6Y4B4              	100.00%		
H2XKB2              	11.60%		
H2XKW3              	7.22%		
F6T860              	5.15%		
Bootstrap support for F6QFD6 as seed ortholog is 59%.
Alternative seed ortholog is H2XV89 (9 bits away from this cluster)
Bootstrap support for F6Y4B4 as seed ortholog is 57%.
Alternative seed ortholog is H2XV89 (9 bits away from this cluster)
Bootstrap support for K7GMF4 as seed ortholog is 100%.

Group of orthologs #5146. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.scrofa:2

F6PKX9              	100.00%		F1SCD1              	100.00%
                    	       		F1SCC9              	28.82%
                    	       		I3LKG6              	13.53%
Bootstrap support for F6PKX9 as seed ortholog is 100%.
Bootstrap support for F1SCD1 as seed ortholog is 48%.
Alternative seed ortholog is F1SUM3 (2 bits away from this cluster)

Group of orthologs #5147. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.scrofa:56

F6QCG4              	100.00%		F1SQX9              	100.00%
                    	       		I3LI19              	93.31%
Bootstrap support for F6QCG4 as seed ortholog is 100%.
Bootstrap support for F1SQX9 as seed ortholog is 100%.

Group of orthologs #5148. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.scrofa:56

F6S8K0              	100.00%		F1S919              	100.00%
Bootstrap support for F6S8K0 as seed ortholog is 100%.
Bootstrap support for F1S919 as seed ortholog is 100%.

Group of orthologs #5149. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.scrofa:11

F6U8Q2              	100.00%		I3LH93              	100.00%
Bootstrap support for F6U8Q2 as seed ortholog is 100%.
Bootstrap support for I3LH93 as seed ortholog is 63%.
Alternative seed ortholog is P49812 (11 bits away from this cluster)

Group of orthologs #5150. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.scrofa:56

F6Q119              	100.00%		Q6WZ17              	100.00%
Bootstrap support for F6Q119 as seed ortholog is 100%.
Bootstrap support for Q6WZ17 as seed ortholog is 100%.

Group of orthologs #5151. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.scrofa:56

H2XM74              	100.00%		I3LHD9              	100.00%
Bootstrap support for H2XM74 as seed ortholog is 100%.
Bootstrap support for I3LHD9 as seed ortholog is 100%.

Group of orthologs #5152. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 S.scrofa:56

H2Y0S5              	100.00%		I3LD28              	100.00%
Bootstrap support for H2Y0S5 as seed ortholog is 100%.
Bootstrap support for I3LD28 as seed ortholog is 100%.

Group of orthologs #5153. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 S.scrofa:55

F6UKJ4              	100.00%		I3LIF1              	100.00%
H2XQY9              	33.44%		F1RL09              	21.71%
F6XSZ3              	15.05%		
Bootstrap support for F6UKJ4 as seed ortholog is 100%.
Bootstrap support for I3LIF1 as seed ortholog is 100%.

Group of orthologs #5154. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 S.scrofa:55

F6YJN9              	100.00%		F1S5Q9              	100.00%
F6UMN4              	7.75%		
Bootstrap support for F6YJN9 as seed ortholog is 100%.
Bootstrap support for F1S5Q9 as seed ortholog is 100%.

Group of orthologs #5155. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 S.scrofa:55

H2XYX0              	100.00%		F1RJI7              	100.00%
                    	       		I3LTV6              	100.00%
Bootstrap support for H2XYX0 as seed ortholog is 100%.
Bootstrap support for F1RJI7 as seed ortholog is 100%.
Bootstrap support for I3LTV6 as seed ortholog is 100%.

Group of orthologs #5156. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 S.scrofa:6

F6R5R8              	100.00%		F1RP90              	100.00%
Bootstrap support for F6R5R8 as seed ortholog is 55%.
Alternative seed ortholog is H2XSW5 (3 bits away from this cluster)
Bootstrap support for F1RP90 as seed ortholog is 63%.
Alternative seed ortholog is F1RP91 (6 bits away from this cluster)

Group of orthologs #5157. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 S.scrofa:55

F6PMS1              	100.00%		F1RZU2              	100.00%
Bootstrap support for F6PMS1 as seed ortholog is 100%.
Bootstrap support for F1RZU2 as seed ortholog is 100%.

Group of orthologs #5158. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.scrofa:54

F7A367              	100.00%		F1RWP3              	100.00%
F6ZKU9              	51.52%		P02189              	9.12%
F6WSS9              	9.09%		F1RGX7              	8.81%
                    	       		P02101              	5.78%
Bootstrap support for F7A367 as seed ortholog is 100%.
Bootstrap support for F1RWP3 as seed ortholog is 100%.

Group of orthologs #5159. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.scrofa:54

F7AQL6              	100.00%		I3LFP9              	100.00%
                    	       		F1S497              	34.82%
                    	       		F1RHC3              	33.23%
Bootstrap support for F7AQL6 as seed ortholog is 100%.
Bootstrap support for I3LFP9 as seed ortholog is 100%.

Group of orthologs #5160. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.scrofa:54

F6XJ64              	100.00%		F1RGT4              	100.00%
Bootstrap support for F6XJ64 as seed ortholog is 100%.
Bootstrap support for F1RGT4 as seed ortholog is 100%.

Group of orthologs #5161. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.scrofa:54

F6U121              	100.00%		F1S994              	100.00%
Bootstrap support for F6U121 as seed ortholog is 100%.
Bootstrap support for F1S994 as seed ortholog is 100%.

Group of orthologs #5162. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.scrofa:54

F6YS92              	100.00%		F1RWV4              	100.00%
Bootstrap support for F6YS92 as seed ortholog is 100%.
Bootstrap support for F1RWV4 as seed ortholog is 100%.

Group of orthologs #5163. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.scrofa:54

H2XNQ7              	100.00%		I3LPZ4              	100.00%
Bootstrap support for H2XNQ7 as seed ortholog is 100%.
Bootstrap support for I3LPZ4 as seed ortholog is 100%.

Group of orthologs #5164. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 S.scrofa:54

H2XV31              	100.00%		I3LN63              	100.00%
Bootstrap support for H2XV31 as seed ortholog is 100%.
Bootstrap support for I3LN63 as seed ortholog is 100%.

Group of orthologs #5165. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.scrofa:53

F6VZJ7              	100.00%		I3L940              	100.00%
                    	       		F1RSL1              	13.22%
Bootstrap support for F6VZJ7 as seed ortholog is 100%.
Bootstrap support for I3L940 as seed ortholog is 100%.

Group of orthologs #5166. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.scrofa:53

F6Y5E2              	100.00%		A5GFX4              	100.00%
Bootstrap support for F6Y5E2 as seed ortholog is 100%.
Bootstrap support for A5GFX4 as seed ortholog is 100%.

Group of orthologs #5167. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.scrofa:53

F6Z2M9              	100.00%		F1RJN1              	100.00%
Bootstrap support for F6Z2M9 as seed ortholog is 100%.
Bootstrap support for F1RJN1 as seed ortholog is 100%.

Group of orthologs #5168. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.scrofa:53

F6RG14              	100.00%		I3LI23              	100.00%
Bootstrap support for F6RG14 as seed ortholog is 100%.
Bootstrap support for I3LI23 as seed ortholog is 100%.

Group of orthologs #5169. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.scrofa:11

F6PKR4              	100.00%		I3LUG8              	100.00%
Bootstrap support for F6PKR4 as seed ortholog is 100%.
Bootstrap support for I3LUG8 as seed ortholog is 68%.
Alternative seed ortholog is I3LHY9 (11 bits away from this cluster)

Group of orthologs #5170. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 S.scrofa:53

H2XRV0              	100.00%		F1SHW2              	100.00%
Bootstrap support for H2XRV0 as seed ortholog is 100%.
Bootstrap support for F1SHW2 as seed ortholog is 100%.

Group of orthologs #5171. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.scrofa:52

F6WDB5              	100.00%		F1S9E4              	100.00%
                    	       		O77737              	29.86%
                    	       		F1SMW2              	21.10%
Bootstrap support for F6WDB5 as seed ortholog is 100%.
Bootstrap support for F1S9E4 as seed ortholog is 100%.

Group of orthologs #5172. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.scrofa:52

F6YSE2              	100.00%		F1S2B5              	100.00%
Bootstrap support for F6YSE2 as seed ortholog is 100%.
Bootstrap support for F1S2B5 as seed ortholog is 100%.

Group of orthologs #5173. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.scrofa:52

H2XJJ4              	100.00%		I3LK69              	100.00%
Bootstrap support for H2XJJ4 as seed ortholog is 100%.
Bootstrap support for I3LK69 as seed ortholog is 100%.

Group of orthologs #5174. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.scrofa:52

H2XMU4              	100.00%		I3LTB8              	100.00%
Bootstrap support for H2XMU4 as seed ortholog is 100%.
Bootstrap support for I3LTB8 as seed ortholog is 100%.

Group of orthologs #5175. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 S.scrofa:52

H2XTB3              	100.00%		I3LR75              	100.00%
Bootstrap support for H2XTB3 as seed ortholog is 100%.
Bootstrap support for I3LR75 as seed ortholog is 100%.

Group of orthologs #5176. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.scrofa:51

H2XYR5              	100.00%		F1SAW9              	100.00%
                    	       		F1RJY2              	43.78%
                    	       		F1RWI0              	5.07%
                    	       		F1S863              	5.07%
Bootstrap support for H2XYR5 as seed ortholog is 100%.
Bootstrap support for F1SAW9 as seed ortholog is 100%.

Group of orthologs #5177. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.scrofa:51

F6Z9Q8              	100.00%		F1RKV3              	100.00%
Bootstrap support for F6Z9Q8 as seed ortholog is 100%.
Bootstrap support for F1RKV3 as seed ortholog is 100%.

Group of orthologs #5178. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 S.scrofa:51

F6Q301              	100.00%		I3LLX5              	100.00%
Bootstrap support for F6Q301 as seed ortholog is 100%.
Bootstrap support for I3LLX5 as seed ortholog is 100%.

Group of orthologs #5179. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.scrofa:50

H2XWK3              	100.00%		A9ED91              	100.00%
                    	       		A9ED79              	35.92%
                    	       		A9ED84              	35.60%
                    	       		F1SGS5              	26.86%
Bootstrap support for H2XWK3 as seed ortholog is 100%.
Bootstrap support for A9ED91 as seed ortholog is 100%.

Group of orthologs #5180. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.scrofa:50

F6QM01              	100.00%		E7EBY5              	100.00%
Bootstrap support for F6QM01 as seed ortholog is 100%.
Bootstrap support for E7EBY5 as seed ortholog is 100%.

Group of orthologs #5181. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.scrofa:50

H2XYV1              	100.00%		F1RW42              	100.00%
Bootstrap support for H2XYV1 as seed ortholog is 100%.
Bootstrap support for F1RW42 as seed ortholog is 100%.

Group of orthologs #5182. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.scrofa:50

H2Y0S1              	100.00%		F1SGJ1              	100.00%
Bootstrap support for H2Y0S1 as seed ortholog is 100%.
Bootstrap support for F1SGJ1 as seed ortholog is 100%.

Group of orthologs #5183. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.scrofa:50

F7B054              	100.00%		K7GSG3              	100.00%
Bootstrap support for F7B054 as seed ortholog is 100%.
Bootstrap support for K7GSG3 as seed ortholog is 100%.

Group of orthologs #5184. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.scrofa:50

H2Y261              	100.00%		I3L8E4              	100.00%
Bootstrap support for H2Y261 as seed ortholog is 100%.
Bootstrap support for I3L8E4 as seed ortholog is 100%.

Group of orthologs #5185. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.scrofa:50

H2XLR4              	100.00%		Q1EG92              	100.00%
Bootstrap support for H2XLR4 as seed ortholog is 100%.
Bootstrap support for Q1EG92 as seed ortholog is 100%.

Group of orthologs #5186. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 S.scrofa:50

H2Y007              	100.00%		I3LT48              	100.00%
Bootstrap support for H2Y007 as seed ortholog is 100%.
Bootstrap support for I3LT48 as seed ortholog is 100%.

Group of orthologs #5187. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.scrofa:49

F6TF00              	100.00%		I3LVH9              	100.00%
F6T5Z7              	17.17%		F1RIC5              	5.36%
H2XM61              	15.96%		
F6TF16              	12.93%		
F7A536              	10.91%		
F6TF22              	9.90%		
H2XZH9              	9.09%		
H2XT07              	7.47%		
H2XZ61              	7.27%		
F6QA93              	6.06%		
F6QA84              	6.06%		
Bootstrap support for F6TF00 as seed ortholog is 100%.
Bootstrap support for I3LVH9 as seed ortholog is 100%.

Group of orthologs #5188. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.scrofa:49

H2XKH7              	100.00%		F1SHX1              	100.00%
F6PJR0              	7.78%		I3L7U2              	75.00%
Bootstrap support for H2XKH7 as seed ortholog is 100%.
Bootstrap support for F1SHX1 as seed ortholog is 100%.

Group of orthologs #5189. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.scrofa:49

F6R2K7              	100.00%		A5GZW8              	100.00%
Bootstrap support for F6R2K7 as seed ortholog is 100%.
Bootstrap support for A5GZW8 as seed ortholog is 100%.

Group of orthologs #5190. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.scrofa:49

F6U277              	100.00%		I3LGB5              	100.00%
Bootstrap support for F6U277 as seed ortholog is 100%.
Bootstrap support for I3LGB5 as seed ortholog is 100%.

Group of orthologs #5191. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 S.scrofa:49

F7ACI7              	100.00%		F1SV50              	100.00%
Bootstrap support for F7ACI7 as seed ortholog is 52%.
Alternative seed ortholog is F6QLA2 (9 bits away from this cluster)
Bootstrap support for F1SV50 as seed ortholog is 100%.

Group of orthologs #5192. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 S.scrofa:49

F7AMD9              	100.00%		I3L7A7              	100.00%
Bootstrap support for F7AMD9 as seed ortholog is 100%.
Bootstrap support for I3L7A7 as seed ortholog is 100%.

Group of orthologs #5193. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 S.scrofa:48

F6XXK1              	100.00%		F1REX4              	100.00%
                    	       		Q95339              	100.00%
Bootstrap support for F6XXK1 as seed ortholog is 100%.
Bootstrap support for F1REX4 as seed ortholog is 100%.
Bootstrap support for Q95339 as seed ortholog is 100%.

Group of orthologs #5194. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 S.scrofa:48

H2XWH9              	100.00%		I3LEQ9              	100.00%
                    	       		I3LQP0              	7.65%
Bootstrap support for H2XWH9 as seed ortholog is 100%.
Bootstrap support for I3LEQ9 as seed ortholog is 100%.

Group of orthologs #5195. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 S.scrofa:48

H2Y082              	100.00%		I3LPM3              	100.00%
                    	       		F1SAJ1              	61.07%
Bootstrap support for H2Y082 as seed ortholog is 100%.
Bootstrap support for I3LPM3 as seed ortholog is 100%.

Group of orthologs #5196. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 S.scrofa:48

H2XK80              	100.00%		F1SQG9              	100.00%
Bootstrap support for H2XK80 as seed ortholog is 100%.
Bootstrap support for F1SQG9 as seed ortholog is 100%.

Group of orthologs #5197. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 S.scrofa:48

H2XTI8              	100.00%		F2Z5V7              	100.00%
Bootstrap support for H2XTI8 as seed ortholog is 100%.
Bootstrap support for F2Z5V7 as seed ortholog is 100%.

Group of orthologs #5198. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:47

H2XTN9              	100.00%		A8R080              	100.00%
H2XTM8              	37.79%		P98110              	34.55%
F6ZXS9              	34.98%		
F6VLE7              	23.94%		
H2XTD3              	15.26%		
H2XP25              	14.79%		
F6TYQ6              	10.56%		
H2XL73              	7.04%		
F6ZGC5              	6.81%		
Bootstrap support for H2XTN9 as seed ortholog is 100%.
Bootstrap support for A8R080 as seed ortholog is 100%.

Group of orthologs #5199. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:47

Q86SC6              	100.00%		Q2EN75              	100.00%
F6S6F7              	5.15%		I3L7Z6              	75.57%
                    	       		F1SFV8              	38.17%
                    	       		F1SFV7              	35.88%
                    	       		F1S2H3              	15.27%
                    	       		F1SFV6              	14.50%
                    	       		I3LAE5              	14.50%
                    	       		I3L5R6              	13.74%
Bootstrap support for Q86SC6 as seed ortholog is 100%.
Bootstrap support for Q2EN75 as seed ortholog is 100%.

Group of orthologs #5200. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:47

F6SI60              	100.00%		F1SHS8              	100.00%
                    	       		I3LVM5              	93.11%
                    	       		F1RWH3              	23.65%
Bootstrap support for F6SI60 as seed ortholog is 100%.
Bootstrap support for F1SHS8 as seed ortholog is 100%.

Group of orthologs #5201. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:47

H2Y2M8              	100.00%		F1RVZ5              	100.00%
                    	       		F1S4G2              	41.64%
                    	       		I3LNX7              	39.16%
Bootstrap support for H2Y2M8 as seed ortholog is 100%.
Bootstrap support for F1RVZ5 as seed ortholog is 100%.

Group of orthologs #5202. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:47

H2XLQ7              	100.00%		B2CPJ7              	100.00%
Bootstrap support for H2XLQ7 as seed ortholog is 100%.
Bootstrap support for B2CPJ7 as seed ortholog is 100%.

Group of orthologs #5203. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:47

H2XNV9              	100.00%		F1RQT0              	100.00%
Bootstrap support for H2XNV9 as seed ortholog is 100%.
Bootstrap support for F1RQT0 as seed ortholog is 100%.

Group of orthologs #5204. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:47

H2Y315              	100.00%		F1SFN1              	100.00%
Bootstrap support for H2Y315 as seed ortholog is 100%.
Bootstrap support for F1SFN1 as seed ortholog is 100%.

Group of orthologs #5205. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:47

H2XWZ8              	100.00%		I3L639              	100.00%
Bootstrap support for H2XWZ8 as seed ortholog is 100%.
Bootstrap support for I3L639 as seed ortholog is 100%.

Group of orthologs #5206. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 S.scrofa:47

H2XS83              	100.00%		I3LK09              	100.00%
Bootstrap support for H2XS83 as seed ortholog is 100%.
Bootstrap support for I3LK09 as seed ortholog is 100%.

Group of orthologs #5207. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 S.scrofa:46

F6ZL37              	100.00%		F1S9V9              	100.00%
                    	       		F1SP48              	34.96%
Bootstrap support for F6ZL37 as seed ortholog is 100%.
Bootstrap support for F1S9V9 as seed ortholog is 100%.

Group of orthologs #5208. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 S.scrofa:46

H2XJM2              	100.00%		I3LST4              	100.00%
                    	       		I3LMA2              	15.16%
Bootstrap support for H2XJM2 as seed ortholog is 100%.
Bootstrap support for I3LST4 as seed ortholog is 100%.

Group of orthologs #5209. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 S.scrofa:46

F7BKY1              	100.00%		F1SB92              	100.00%
Bootstrap support for F7BKY1 as seed ortholog is 100%.
Bootstrap support for F1SB92 as seed ortholog is 100%.

Group of orthologs #5210. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 S.scrofa:46

H2XJS5              	100.00%		I3LT16              	100.00%
Bootstrap support for H2XJS5 as seed ortholog is 100%.
Bootstrap support for I3LT16 as seed ortholog is 100%.

Group of orthologs #5211. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.scrofa:45

H2Y0A3              	100.00%		B7UBT5              	100.00%
                    	       		K7GMH1              	11.41%
                    	       		B8YGC1              	11.07%
                    	       		F1SNX2              	10.74%
                    	       		F1RLT4              	7.72%
                    	       		Q29191              	5.03%
Bootstrap support for H2Y0A3 as seed ortholog is 100%.
Bootstrap support for B7UBT5 as seed ortholog is 100%.

Group of orthologs #5212. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.scrofa:45

H2Y023              	100.00%		F1RSI5              	100.00%
H2XTM4              	57.34%		
Bootstrap support for H2Y023 as seed ortholog is 100%.
Bootstrap support for F1RSI5 as seed ortholog is 100%.

Group of orthologs #5213. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.scrofa:45

H2XTE8              	100.00%		F1RFC5              	100.00%
Bootstrap support for H2XTE8 as seed ortholog is 100%.
Bootstrap support for F1RFC5 as seed ortholog is 100%.

Group of orthologs #5214. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.scrofa:45

F6PHZ4              	100.00%		I3L8E1              	100.00%
Bootstrap support for F6PHZ4 as seed ortholog is 100%.
Bootstrap support for I3L8E1 as seed ortholog is 100%.

Group of orthologs #5215. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.scrofa:1

H2XJI6              	100.00%		F1SB17              	100.00%
Bootstrap support for H2XJI6 as seed ortholog is 100%.
Bootstrap support for F1SB17 as seed ortholog is 51%.
Alternative seed ortholog is I3LUH0 (1 bits away from this cluster)

Group of orthologs #5216. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.scrofa:45

H2XSB9              	100.00%		F1SAF5              	100.00%
Bootstrap support for H2XSB9 as seed ortholog is 100%.
Bootstrap support for F1SAF5 as seed ortholog is 100%.

Group of orthologs #5217. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 S.scrofa:45

H2Y1V1              	100.00%		I3LDM9              	100.00%
Bootstrap support for H2Y1V1 as seed ortholog is 100%.
Bootstrap support for I3LDM9 as seed ortholog is 100%.

Group of orthologs #5218. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.scrofa:44

F6Y506              	100.00%		F1SAL1              	100.00%
H2XL41              	30.04%		
H2XPD4              	11.03%		
F6ZUA8              	9.29%		
Bootstrap support for F6Y506 as seed ortholog is 100%.
Bootstrap support for F1SAL1 as seed ortholog is 100%.

Group of orthologs #5219. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.scrofa:44

H2XMZ0              	100.00%		F1SGC9              	100.00%
                    	       		F1RRX5              	21.64%
                    	       		I3LU62              	19.49%
Bootstrap support for H2XMZ0 as seed ortholog is 100%.
Bootstrap support for F1SGC9 as seed ortholog is 100%.

Group of orthologs #5220. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.scrofa:44

F6YXM0              	100.00%		I3LV57              	100.00%
                    	       		F1RLB2              	10.79%
                    	       		F1RLZ1              	10.79%
Bootstrap support for F6YXM0 as seed ortholog is 100%.
Bootstrap support for I3LV57 as seed ortholog is 100%.

Group of orthologs #5221. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.scrofa:44

F6U4S9              	100.00%		F1RFC0              	100.00%
Bootstrap support for F6U4S9 as seed ortholog is 100%.
Bootstrap support for F1RFC0 as seed ortholog is 100%.

Group of orthologs #5222. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.scrofa:44

H2XTT8              	100.00%		F1SDF8              	100.00%
Bootstrap support for H2XTT8 as seed ortholog is 100%.
Bootstrap support for F1SDF8 as seed ortholog is 100%.

Group of orthologs #5223. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 S.scrofa:44

H2XQG6              	100.00%		I3LN43              	100.00%
Bootstrap support for H2XQG6 as seed ortholog is 100%.
Bootstrap support for I3LN43 as seed ortholog is 100%.

Group of orthologs #5224. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 S.scrofa:43

F6PT97              	100.00%		F1RW10              	100.00%
                    	       		F1SDP0              	22.19%
Bootstrap support for F6PT97 as seed ortholog is 100%.
Bootstrap support for F1RW10 as seed ortholog is 100%.

Group of orthologs #5225. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 S.scrofa:43

F6UKI5              	100.00%		F1SHZ9              	100.00%
H2XRP5              	9.15%		
Bootstrap support for F6UKI5 as seed ortholog is 100%.
Bootstrap support for F1SHZ9 as seed ortholog is 100%.

Group of orthologs #5226. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.scrofa:42

F6S0U7              	100.00%		F1RWX0              	100.00%
Bootstrap support for F6S0U7 as seed ortholog is 100%.
Bootstrap support for F1RWX0 as seed ortholog is 100%.

Group of orthologs #5227. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.scrofa:42

F6Q6F0              	100.00%		I3LHF0              	100.00%
Bootstrap support for F6Q6F0 as seed ortholog is 100%.
Bootstrap support for I3LHF0 as seed ortholog is 100%.

Group of orthologs #5228. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.scrofa:42

F6SFZ3              	100.00%		I3LMU8              	100.00%
Bootstrap support for F6SFZ3 as seed ortholog is 100%.
Bootstrap support for I3LMU8 as seed ortholog is 100%.

Group of orthologs #5229. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 S.scrofa:42

H2XWN7              	100.00%		I3LA82              	100.00%
Bootstrap support for H2XWN7 as seed ortholog is 100%.
Bootstrap support for I3LA82 as seed ortholog is 100%.

Group of orthologs #5230. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 S.scrofa:41

F6RI55              	100.00%		F1S690              	100.00%
                    	       		F1S689              	12.54%
Bootstrap support for F6RI55 as seed ortholog is 100%.
Bootstrap support for F1S690 as seed ortholog is 100%.

Group of orthologs #5231. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 S.scrofa:41

H2XNM6              	100.00%		F1RFD4              	100.00%
Bootstrap support for H2XNM6 as seed ortholog is 100%.
Bootstrap support for F1RFD4 as seed ortholog is 100%.

Group of orthologs #5232. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 S.scrofa:41

H2XU39              	100.00%		I3LHI5              	100.00%
Bootstrap support for H2XU39 as seed ortholog is 100%.
Bootstrap support for I3LHI5 as seed ortholog is 100%.

Group of orthologs #5233. Best score 40 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 S.scrofa:40

F6Y7H6              	100.00%		B3W6M6              	23.56%
F6Y7J8              	100.00%		Q2VIU1              	100.00%
                    	       		Q06AV5              	23.56%
Bootstrap support for F6Y7H6 as seed ortholog is 100%.
Bootstrap support for F6Y7J8 as seed ortholog is 100%.
Bootstrap support for Q2VIU1 as seed ortholog is 100%.

Group of orthologs #5234. Best score 40 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 S.scrofa:40

H2XRA8              	100.00%		F1RWN0              	100.00%
                    	       		A5A8Y7              	42.57%
Bootstrap support for H2XRA8 as seed ortholog is 100%.
Bootstrap support for F1RWN0 as seed ortholog is 100%.

Group of orthologs #5235. Best score 40 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 S.scrofa:40

H2XVM6              	100.00%		I3LH41              	100.00%
Bootstrap support for H2XVM6 as seed ortholog is 100%.
Bootstrap support for I3LH41 as seed ortholog is 100%.

Group of orthologs #5236. Best score 40 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 S.scrofa:40

L7N0V5              	100.00%		K7GNT5              	100.00%
Bootstrap support for L7N0V5 as seed ortholog is 100%.
Bootstrap support for K7GNT5 as seed ortholog is 100%.