###################################
2336 groups of orthologs
2867 in-paralogs from C.intestinalis
3232 in-paralogs from P.ramorum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3010 bits
Score difference with first non-orthologous sequence - C.intestinalis:2124 P.ramorum:748

F7AU91              	100.00%		H3HCG5              	100.00%
F6ZZ40              	41.72%		H3GR96              	13.50%
F6RNF5              	27.98%		
Bootstrap support for F7AU91 as seed ortholog is 100%.
Bootstrap support for H3HCG5 as seed ortholog is 100%.

Group of orthologs #2. Best score 2999 bits
Score difference with first non-orthologous sequence - C.intestinalis:2999 P.ramorum:736

F6V620              	100.00%		H3GEN5              	100.00%
H2XPC8              	41.04%		
F6PHB9              	35.09%		
Bootstrap support for F6V620 as seed ortholog is 100%.
Bootstrap support for H3GEN5 as seed ortholog is 100%.

Group of orthologs #3. Best score 2074 bits
Score difference with first non-orthologous sequence - C.intestinalis:2074 P.ramorum:637

F6ZKS0              	100.00%		H3HBY2              	100.00%
Bootstrap support for F6ZKS0 as seed ortholog is 100%.
Bootstrap support for H3HBY2 as seed ortholog is 100%.

Group of orthologs #4. Best score 2009 bits
Score difference with first non-orthologous sequence - C.intestinalis:2009 P.ramorum:993

F6ZLB7              	100.00%		H3G6V1              	100.00%
Bootstrap support for F6ZLB7 as seed ortholog is 100%.
Bootstrap support for H3G6V1 as seed ortholog is 100%.

Group of orthologs #5. Best score 1886 bits
Score difference with first non-orthologous sequence - C.intestinalis:1886 P.ramorum:1141

F6SUC2              	100.00%		H3GA78              	100.00%
Bootstrap support for F6SUC2 as seed ortholog is 100%.
Bootstrap support for H3GA78 as seed ortholog is 100%.

Group of orthologs #6. Best score 1759 bits
Score difference with first non-orthologous sequence - C.intestinalis:1759 P.ramorum:1120

F7AMF6              	100.00%		H3G958              	100.00%
Bootstrap support for F7AMF6 as seed ortholog is 100%.
Bootstrap support for H3G958 as seed ortholog is 100%.

Group of orthologs #7. Best score 1612 bits
Score difference with first non-orthologous sequence - C.intestinalis:1612 P.ramorum:1612

F6T0F1              	100.00%		H3GWA7              	100.00%
Bootstrap support for F6T0F1 as seed ortholog is 100%.
Bootstrap support for H3GWA7 as seed ortholog is 100%.

Group of orthologs #8. Best score 1480 bits
Score difference with first non-orthologous sequence - C.intestinalis:1480 P.ramorum:762

F6QR00              	100.00%		H3GA07              	100.00%
Bootstrap support for F6QR00 as seed ortholog is 100%.
Bootstrap support for H3GA07 as seed ortholog is 100%.

Group of orthologs #9. Best score 1475 bits
Score difference with first non-orthologous sequence - C.intestinalis:1475 P.ramorum:1475

F6WUQ7              	100.00%		H3G7C4              	100.00%
Bootstrap support for F6WUQ7 as seed ortholog is 100%.
Bootstrap support for H3G7C4 as seed ortholog is 100%.

Group of orthologs #10. Best score 1374 bits
Score difference with first non-orthologous sequence - C.intestinalis:1374 P.ramorum:1374

H2Y1G0              	100.00%		H3G8D7              	100.00%
Bootstrap support for H2Y1G0 as seed ortholog is 100%.
Bootstrap support for H3G8D7 as seed ortholog is 100%.

Group of orthologs #11. Best score 1326 bits
Score difference with first non-orthologous sequence - C.intestinalis:789 P.ramorum:710

F6YKR9              	100.00%		H3G987              	100.00%
Bootstrap support for F6YKR9 as seed ortholog is 100%.
Bootstrap support for H3G987 as seed ortholog is 100%.

Group of orthologs #12. Best score 1299 bits
Score difference with first non-orthologous sequence - C.intestinalis:1299 P.ramorum:1299

F6XJM1              	100.00%		H3GAQ5              	100.00%
Bootstrap support for F6XJM1 as seed ortholog is 100%.
Bootstrap support for H3GAQ5 as seed ortholog is 100%.

Group of orthologs #13. Best score 1217 bits
Score difference with first non-orthologous sequence - C.intestinalis:1217 P.ramorum:1217

F6TWU9              	100.00%		H3G968              	100.00%
Bootstrap support for F6TWU9 as seed ortholog is 100%.
Bootstrap support for H3G968 as seed ortholog is 100%.

Group of orthologs #14. Best score 1198 bits
Score difference with first non-orthologous sequence - C.intestinalis:1198 P.ramorum:1198

F6SXA4              	100.00%		H3G9Y5              	100.00%
Bootstrap support for F6SXA4 as seed ortholog is 100%.
Bootstrap support for H3G9Y5 as seed ortholog is 100%.

Group of orthologs #15. Best score 1150 bits
Score difference with first non-orthologous sequence - C.intestinalis:1150 P.ramorum:642

F6VLN4              	100.00%		H3G7S3              	100.00%
Bootstrap support for F6VLN4 as seed ortholog is 100%.
Bootstrap support for H3G7S3 as seed ortholog is 100%.

Group of orthologs #16. Best score 1149 bits
Score difference with first non-orthologous sequence - C.intestinalis:1149 P.ramorum:213

F7AKG2              	100.00%		H3G7M6              	100.00%
Bootstrap support for F7AKG2 as seed ortholog is 100%.
Bootstrap support for H3G7M6 as seed ortholog is 99%.

Group of orthologs #17. Best score 1146 bits
Score difference with first non-orthologous sequence - C.intestinalis:1146 P.ramorum:1146

F6W1H2              	100.00%		H3G9M7              	100.00%
Bootstrap support for F6W1H2 as seed ortholog is 100%.
Bootstrap support for H3G9M7 as seed ortholog is 100%.

Group of orthologs #18. Best score 1131 bits
Score difference with first non-orthologous sequence - C.intestinalis:1131 P.ramorum:795

F6WXT4              	100.00%		H3G917              	100.00%
Bootstrap support for F6WXT4 as seed ortholog is 100%.
Bootstrap support for H3G917 as seed ortholog is 100%.

Group of orthologs #19. Best score 1101 bits
Score difference with first non-orthologous sequence - C.intestinalis:1101 P.ramorum:1101

F6Y8C3              	100.00%		H3G9W7              	100.00%
Bootstrap support for F6Y8C3 as seed ortholog is 100%.
Bootstrap support for H3G9W7 as seed ortholog is 100%.

Group of orthologs #20. Best score 1101 bits
Score difference with first non-orthologous sequence - C.intestinalis:1101 P.ramorum:1101

H2XJT1              	100.00%		H3GA87              	100.00%
Bootstrap support for H2XJT1 as seed ortholog is 100%.
Bootstrap support for H3GA87 as seed ortholog is 100%.

Group of orthologs #21. Best score 1086 bits
Score difference with first non-orthologous sequence - C.intestinalis:597 P.ramorum:568

F6UYA6              	100.00%		H3G7A2              	100.00%
Bootstrap support for F6UYA6 as seed ortholog is 100%.
Bootstrap support for H3G7A2 as seed ortholog is 100%.

Group of orthologs #22. Best score 1050 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 P.ramorum:1050

F6W0Y5              	100.00%		H3GTK1              	100.00%
F6V519              	25.51%		
Bootstrap support for F6W0Y5 as seed ortholog is 100%.
Bootstrap support for H3GTK1 as seed ortholog is 100%.

Group of orthologs #23. Best score 1026 bits
Score difference with first non-orthologous sequence - C.intestinalis:1026 P.ramorum:599

F6XKY1              	100.00%		H3G8I7              	100.00%
Bootstrap support for F6XKY1 as seed ortholog is 100%.
Bootstrap support for H3G8I7 as seed ortholog is 100%.

Group of orthologs #24. Best score 1019 bits
Score difference with first non-orthologous sequence - C.intestinalis:1019 P.ramorum:1019

F6Z5U4              	100.00%		H3GEP5              	100.00%
                    	       		H3H7Q1              	96.20%
                    	       		H3G6A8              	26.11%
Bootstrap support for F6Z5U4 as seed ortholog is 100%.
Bootstrap support for H3GEP5 as seed ortholog is 100%.

Group of orthologs #25. Best score 1013 bits
Score difference with first non-orthologous sequence - C.intestinalis:832 P.ramorum:1013

H2XQK9              	100.00%		H3G5R3              	100.00%
Bootstrap support for H2XQK9 as seed ortholog is 100%.
Bootstrap support for H3G5R3 as seed ortholog is 100%.

Group of orthologs #26. Best score 999 bits
Score difference with first non-orthologous sequence - C.intestinalis:999 P.ramorum:999

F6WCR1              	100.00%		H3GAM4              	100.00%
Bootstrap support for F6WCR1 as seed ortholog is 100%.
Bootstrap support for H3GAM4 as seed ortholog is 100%.

Group of orthologs #27. Best score 981 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.ramorum:288

F6W8I3              	100.00%		H3GB49              	100.00%
                    	       		H3GB15              	80.13%
                    	       		H3G9G6              	25.24%
Bootstrap support for F6W8I3 as seed ortholog is 99%.
Bootstrap support for H3GB49 as seed ortholog is 100%.

Group of orthologs #28. Best score 980 bits
Score difference with first non-orthologous sequence - C.intestinalis:980 P.ramorum:980

H2XJF1              	100.00%		H3G976              	100.00%
Bootstrap support for H2XJF1 as seed ortholog is 100%.
Bootstrap support for H3G976 as seed ortholog is 100%.

Group of orthologs #29. Best score 977 bits
Score difference with first non-orthologous sequence - C.intestinalis:977 P.ramorum:977

H2XQI5              	100.00%		H3G9D6              	100.00%
Bootstrap support for H2XQI5 as seed ortholog is 100%.
Bootstrap support for H3G9D6 as seed ortholog is 100%.

Group of orthologs #30. Best score 975 bits
Score difference with first non-orthologous sequence - C.intestinalis:975 P.ramorum:188

F6TKP9              	100.00%		H3G5T3              	100.00%
F6UZT3              	11.24%		
Bootstrap support for F6TKP9 as seed ortholog is 100%.
Bootstrap support for H3G5T3 as seed ortholog is 99%.

Group of orthologs #31. Best score 973 bits
Score difference with first non-orthologous sequence - C.intestinalis:973 P.ramorum:973

F6YYG7              	100.00%		H3G8G6              	100.00%
Bootstrap support for F6YYG7 as seed ortholog is 100%.
Bootstrap support for H3G8G6 as seed ortholog is 100%.

Group of orthologs #32. Best score 970 bits
Score difference with first non-orthologous sequence - C.intestinalis:970 P.ramorum:532

F6S181              	100.00%		H3G5P5              	100.00%
Bootstrap support for F6S181 as seed ortholog is 100%.
Bootstrap support for H3G5P5 as seed ortholog is 100%.

Group of orthologs #33. Best score 970 bits
Score difference with first non-orthologous sequence - C.intestinalis:970 P.ramorum:333

F6U4V1              	100.00%		H3G877              	100.00%
Bootstrap support for F6U4V1 as seed ortholog is 100%.
Bootstrap support for H3G877 as seed ortholog is 100%.

Group of orthologs #34. Best score 969 bits
Score difference with first non-orthologous sequence - C.intestinalis:969 P.ramorum:856

F6RZ17              	100.00%		H3GWQ1              	100.00%
Bootstrap support for F6RZ17 as seed ortholog is 100%.
Bootstrap support for H3GWQ1 as seed ortholog is 100%.

Group of orthologs #35. Best score 968 bits
Score difference with first non-orthologous sequence - C.intestinalis:968 P.ramorum:896

F6YD90              	100.00%		H3G7T4              	100.00%
Bootstrap support for F6YD90 as seed ortholog is 100%.
Bootstrap support for H3G7T4 as seed ortholog is 100%.

Group of orthologs #36. Best score 957 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 P.ramorum:207

F6PGX9              	100.00%		H3GKM1              	100.00%
Bootstrap support for F6PGX9 as seed ortholog is 99%.
Bootstrap support for H3GKM1 as seed ortholog is 99%.

Group of orthologs #37. Best score 948 bits
Score difference with first non-orthologous sequence - C.intestinalis:948 P.ramorum:948

H2XZ27              	100.00%		H3HD69              	100.00%
Bootstrap support for H2XZ27 as seed ortholog is 100%.
Bootstrap support for H3HD69 as seed ortholog is 100%.

Group of orthologs #38. Best score 940 bits
Score difference with first non-orthologous sequence - C.intestinalis:785 P.ramorum:501

F6X211              	100.00%		H3G9P7              	100.00%
H2XSH4              	95.69%		
H2XNA4              	94.25%		
F6X229              	52.78%		
Bootstrap support for F6X211 as seed ortholog is 100%.
Bootstrap support for H3G9P7 as seed ortholog is 100%.

Group of orthologs #39. Best score 935 bits
Score difference with first non-orthologous sequence - C.intestinalis:935 P.ramorum:935

F6XQM9              	100.00%		H3GZH1              	100.00%
Bootstrap support for F6XQM9 as seed ortholog is 100%.
Bootstrap support for H3GZH1 as seed ortholog is 100%.

Group of orthologs #40. Best score 933 bits
Score difference with first non-orthologous sequence - C.intestinalis:933 P.ramorum:933

H2Y1Y9              	100.00%		H3HBF0              	100.00%
Bootstrap support for H2Y1Y9 as seed ortholog is 100%.
Bootstrap support for H3HBF0 as seed ortholog is 100%.

Group of orthologs #41. Best score 929 bits
Score difference with first non-orthologous sequence - C.intestinalis:929 P.ramorum:929

F7ANR5              	100.00%		H3G8E6              	100.00%
Bootstrap support for F7ANR5 as seed ortholog is 100%.
Bootstrap support for H3G8E6 as seed ortholog is 100%.

Group of orthologs #42. Best score 915 bits
Score difference with first non-orthologous sequence - C.intestinalis:915 P.ramorum:915

F7BKT8              	100.00%		H3G6X8              	100.00%
Bootstrap support for F7BKT8 as seed ortholog is 100%.
Bootstrap support for H3G6X8 as seed ortholog is 100%.

Group of orthologs #43. Best score 910 bits
Score difference with first non-orthologous sequence - C.intestinalis:868 P.ramorum:512

H2XY07              	100.00%		H3G603              	100.00%
Bootstrap support for H2XY07 as seed ortholog is 100%.
Bootstrap support for H3G603 as seed ortholog is 100%.

Group of orthologs #44. Best score 900 bits
Score difference with first non-orthologous sequence - C.intestinalis:900 P.ramorum:900

F6QRG3              	100.00%		H3G5Z2              	100.00%
Bootstrap support for F6QRG3 as seed ortholog is 100%.
Bootstrap support for H3G5Z2 as seed ortholog is 100%.

Group of orthologs #45. Best score 896 bits
Score difference with first non-orthologous sequence - C.intestinalis:896 P.ramorum:505

H2XLC2              	100.00%		H3GA38              	100.00%
Bootstrap support for H2XLC2 as seed ortholog is 100%.
Bootstrap support for H3GA38 as seed ortholog is 100%.

Group of orthologs #46. Best score 894 bits
Score difference with first non-orthologous sequence - C.intestinalis:894 P.ramorum:80

Q4H2Q8              	100.00%		H3GSL8              	100.00%
Bootstrap support for Q4H2Q8 as seed ortholog is 100%.
Bootstrap support for H3GSL8 as seed ortholog is 84%.

Group of orthologs #47. Best score 883 bits
Score difference with first non-orthologous sequence - C.intestinalis:883 P.ramorum:883

F6U8H5              	100.00%		H3GJ85              	100.00%
Bootstrap support for F6U8H5 as seed ortholog is 100%.
Bootstrap support for H3GJ85 as seed ortholog is 100%.

Group of orthologs #48. Best score 882 bits
Score difference with first non-orthologous sequence - C.intestinalis:882 P.ramorum:802

F6WLW9              	100.00%		H3HC99              	100.00%
Bootstrap support for F6WLW9 as seed ortholog is 100%.
Bootstrap support for H3HC99 as seed ortholog is 100%.

Group of orthologs #49. Best score 880 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 P.ramorum:58

F6WVU8              	100.00%		H3G8G1              	100.00%
F6S2T0              	15.83%		
F6U3N6              	12.15%		
F6U4J4              	5.68%		
Bootstrap support for F6WVU8 as seed ortholog is 97%.
Bootstrap support for H3G8G1 as seed ortholog is 82%.

Group of orthologs #50. Best score 864 bits
Score difference with first non-orthologous sequence - C.intestinalis:864 P.ramorum:744

F6PXA1              	100.00%		H3GHV2              	100.00%
Bootstrap support for F6PXA1 as seed ortholog is 100%.
Bootstrap support for H3GHV2 as seed ortholog is 100%.

Group of orthologs #51. Best score 860 bits
Score difference with first non-orthologous sequence - C.intestinalis:860 P.ramorum:860

F6QDE3              	100.00%		H3GTR2              	100.00%
Bootstrap support for F6QDE3 as seed ortholog is 100%.
Bootstrap support for H3GTR2 as seed ortholog is 100%.

Group of orthologs #52. Best score 860 bits
Score difference with first non-orthologous sequence - C.intestinalis:860 P.ramorum:860

F7BJA3              	100.00%		H3GKT1              	100.00%
Bootstrap support for F7BJA3 as seed ortholog is 100%.
Bootstrap support for H3GKT1 as seed ortholog is 100%.

Group of orthologs #53. Best score 858 bits
Score difference with first non-orthologous sequence - C.intestinalis:858 P.ramorum:858

F6UXR3              	100.00%		H3G9B0              	100.00%
Bootstrap support for F6UXR3 as seed ortholog is 100%.
Bootstrap support for H3G9B0 as seed ortholog is 100%.

Group of orthologs #54. Best score 854 bits
Score difference with first non-orthologous sequence - C.intestinalis:762 P.ramorum:739

F6XZ43              	100.00%		H3G7J9              	100.00%
Bootstrap support for F6XZ43 as seed ortholog is 100%.
Bootstrap support for H3G7J9 as seed ortholog is 100%.

Group of orthologs #55. Best score 854 bits
Score difference with first non-orthologous sequence - C.intestinalis:854 P.ramorum:854

F6YYE4              	100.00%		H3G6H1              	100.00%
Bootstrap support for F6YYE4 as seed ortholog is 100%.
Bootstrap support for H3G6H1 as seed ortholog is 100%.

Group of orthologs #56. Best score 849 bits
Score difference with first non-orthologous sequence - C.intestinalis:725 P.ramorum:413

H2XRP2              	100.00%		H3GAX1              	100.00%
Bootstrap support for H2XRP2 as seed ortholog is 100%.
Bootstrap support for H3GAX1 as seed ortholog is 100%.

Group of orthologs #57. Best score 846 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 P.ramorum:573

L7N0T3              	100.00%		H3GAD7              	100.00%
F6SYL0              	86.57%		
Bootstrap support for L7N0T3 as seed ortholog is 100%.
Bootstrap support for H3GAD7 as seed ortholog is 100%.

Group of orthologs #58. Best score 846 bits
Score difference with first non-orthologous sequence - C.intestinalis:846 P.ramorum:846

F7BBD1              	100.00%		H3GUY1              	100.00%
Bootstrap support for F7BBD1 as seed ortholog is 100%.
Bootstrap support for H3GUY1 as seed ortholog is 100%.

Group of orthologs #59. Best score 843 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.ramorum:222

F6SXM4              	100.00%		H3G860              	100.00%
F7BHA0              	10.18%		
Bootstrap support for F6SXM4 as seed ortholog is 99%.
Bootstrap support for H3G860 as seed ortholog is 100%.

Group of orthologs #60. Best score 820 bits
Score difference with first non-orthologous sequence - C.intestinalis:820 P.ramorum:820

F6U4L6              	100.00%		H3GLZ7              	100.00%
Bootstrap support for F6U4L6 as seed ortholog is 100%.
Bootstrap support for H3GLZ7 as seed ortholog is 100%.

Group of orthologs #61. Best score 814 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.ramorum:279

F6SJ24              	100.00%		H3G9Y4              	100.00%
F7B0Q2              	86.73%		H3G7E9              	86.41%
F6QB29              	84.96%		H3G9X9              	44.66%
F6XCZ8              	70.80%		H3G7E7              	36.89%
F6QB20              	67.26%		H3G9Y0              	30.10%
L7N0T5              	63.72%		
Bootstrap support for F6SJ24 as seed ortholog is 99%.
Bootstrap support for H3G9Y4 as seed ortholog is 100%.

Group of orthologs #62. Best score 813 bits
Score difference with first non-orthologous sequence - C.intestinalis:660 P.ramorum:202

F6W1I6              	100.00%		H3GQ90              	100.00%
                    	       		H3GRQ9              	50.00%
Bootstrap support for F6W1I6 as seed ortholog is 100%.
Bootstrap support for H3GQ90 as seed ortholog is 99%.

Group of orthologs #63. Best score 809 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.ramorum:272

F6Q9K0              	100.00%		H3GAQ3              	100.00%
Bootstrap support for F6Q9K0 as seed ortholog is 99%.
Bootstrap support for H3GAQ3 as seed ortholog is 100%.

Group of orthologs #64. Best score 796 bits
Score difference with first non-orthologous sequence - C.intestinalis:796 P.ramorum:796

F6R8H4              	100.00%		H3G862              	100.00%
Bootstrap support for F6R8H4 as seed ortholog is 100%.
Bootstrap support for H3G862 as seed ortholog is 100%.

Group of orthologs #65. Best score 796 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 P.ramorum:421

H2Y1Z9              	100.00%		H3G795              	100.00%
Bootstrap support for H2Y1Z9 as seed ortholog is 100%.
Bootstrap support for H3G795 as seed ortholog is 100%.

Group of orthologs #66. Best score 794 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.ramorum:219

F7BPQ7              	100.00%		H3GBZ6              	100.00%
Bootstrap support for F7BPQ7 as seed ortholog is 98%.
Bootstrap support for H3GBZ6 as seed ortholog is 99%.

Group of orthologs #67. Best score 792 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 P.ramorum:285

F6QVH1              	100.00%		H3G922              	100.00%
Bootstrap support for F6QVH1 as seed ortholog is 100%.
Bootstrap support for H3G922 as seed ortholog is 100%.

Group of orthologs #68. Best score 791 bits
Score difference with first non-orthologous sequence - C.intestinalis:791 P.ramorum:791

F6Z743              	100.00%		H3GTJ1              	100.00%
Bootstrap support for F6Z743 as seed ortholog is 100%.
Bootstrap support for H3GTJ1 as seed ortholog is 100%.

Group of orthologs #69. Best score 790 bits
Score difference with first non-orthologous sequence - C.intestinalis:790 P.ramorum:289

F6Z5E6              	100.00%		H3G7B9              	100.00%
Bootstrap support for F6Z5E6 as seed ortholog is 100%.
Bootstrap support for H3G7B9 as seed ortholog is 100%.

Group of orthologs #70. Best score 789 bits
Score difference with first non-orthologous sequence - C.intestinalis:789 P.ramorum:789

F6YNJ1              	100.00%		H3G966              	100.00%
Bootstrap support for F6YNJ1 as seed ortholog is 100%.
Bootstrap support for H3G966 as seed ortholog is 100%.

Group of orthologs #71. Best score 789 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 P.ramorum:314

H2XU53              	100.00%		H3G8C0              	100.00%
Bootstrap support for H2XU53 as seed ortholog is 100%.
Bootstrap support for H3G8C0 as seed ortholog is 100%.

Group of orthologs #72. Best score 785 bits
Score difference with first non-orthologous sequence - C.intestinalis:624 P.ramorum:785

F6SI15              	100.00%		H3G5M3              	100.00%
Bootstrap support for F6SI15 as seed ortholog is 100%.
Bootstrap support for H3G5M3 as seed ortholog is 100%.

Group of orthologs #73. Best score 785 bits
Score difference with first non-orthologous sequence - C.intestinalis:785 P.ramorum:238

F7BEI8              	100.00%		H3G5Z3              	100.00%
Bootstrap support for F7BEI8 as seed ortholog is 100%.
Bootstrap support for H3G5Z3 as seed ortholog is 100%.

Group of orthologs #74. Best score 779 bits
Score difference with first non-orthologous sequence - C.intestinalis:779 P.ramorum:779

F7B9N2              	100.00%		H3G9I8              	100.00%
Bootstrap support for F7B9N2 as seed ortholog is 100%.
Bootstrap support for H3G9I8 as seed ortholog is 100%.

Group of orthologs #75. Best score 777 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.ramorum:364

F6USW1              	100.00%		H3GYZ5              	100.00%
                    	       		H3GWY5              	61.16%
                    	       		H3GYZ4              	58.25%
                    	       		H3GK29              	42.53%
                    	       		H3GZ00              	41.84%
                    	       		H3GSM3              	40.24%
                    	       		H3GYZ7              	32.36%
                    	       		H3H5H8              	24.81%
                    	       		H3GH74              	6.51%
                    	       		H3GIJ8              	5.59%
Bootstrap support for F6USW1 as seed ortholog is 97%.
Bootstrap support for H3GYZ5 as seed ortholog is 99%.

Group of orthologs #76. Best score 762 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.ramorum:40

F6ZHQ8              	100.00%		H3GQ80              	100.00%
                    	       		H3G823              	25.16%
Bootstrap support for F6ZHQ8 as seed ortholog is 98%.
Bootstrap support for H3GQ80 as seed ortholog is 70%.
Alternative seed ortholog is H3GNA3 (40 bits away from this cluster)

Group of orthologs #77. Best score 760 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 P.ramorum:760

H2XKD5              	100.00%		H3G930              	100.00%
Bootstrap support for H2XKD5 as seed ortholog is 100%.
Bootstrap support for H3G930 as seed ortholog is 100%.

Group of orthologs #78. Best score 757 bits
Score difference with first non-orthologous sequence - C.intestinalis:757 P.ramorum:757

H2XJT5              	100.00%		H3GB02              	100.00%
Bootstrap support for H2XJT5 as seed ortholog is 100%.
Bootstrap support for H3GB02 as seed ortholog is 100%.

Group of orthologs #79. Best score 756 bits
Score difference with first non-orthologous sequence - C.intestinalis:756 P.ramorum:756

F6QX34              	100.00%		H3G9K3              	100.00%
Bootstrap support for F6QX34 as seed ortholog is 100%.
Bootstrap support for H3G9K3 as seed ortholog is 100%.

Group of orthologs #80. Best score 755 bits
Score difference with first non-orthologous sequence - C.intestinalis:755 P.ramorum:755

F7ADN1              	100.00%		H3GHV9              	100.00%
Bootstrap support for F7ADN1 as seed ortholog is 100%.
Bootstrap support for H3GHV9 as seed ortholog is 100%.

Group of orthologs #81. Best score 737 bits
Score difference with first non-orthologous sequence - C.intestinalis:650 P.ramorum:81

F6Y4K6              	100.00%		H3G6R8              	100.00%
Bootstrap support for F6Y4K6 as seed ortholog is 100%.
Bootstrap support for H3G6R8 as seed ortholog is 90%.

Group of orthologs #82. Best score 737 bits
Score difference with first non-orthologous sequence - C.intestinalis:737 P.ramorum:737

F6ZRN0              	100.00%		H3GQP2              	100.00%
Bootstrap support for F6ZRN0 as seed ortholog is 100%.
Bootstrap support for H3GQP2 as seed ortholog is 100%.

Group of orthologs #83. Best score 728 bits
Score difference with first non-orthologous sequence - C.intestinalis:728 P.ramorum:728

F7A8C2              	100.00%		H3GAT6              	100.00%
Bootstrap support for F7A8C2 as seed ortholog is 100%.
Bootstrap support for H3GAT6 as seed ortholog is 100%.

Group of orthologs #84. Best score 727 bits
Score difference with first non-orthologous sequence - C.intestinalis:727 P.ramorum:552

F6UKC4              	100.00%		H3G9L2              	100.00%
Bootstrap support for F6UKC4 as seed ortholog is 100%.
Bootstrap support for H3G9L2 as seed ortholog is 100%.

Group of orthologs #85. Best score 723 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 P.ramorum:723

F6WF19              	100.00%		H3GA94              	100.00%
                    	       		H3G7R9              	38.22%
Bootstrap support for F6WF19 as seed ortholog is 100%.
Bootstrap support for H3GA94 as seed ortholog is 100%.

Group of orthologs #86. Best score 716 bits
Score difference with first non-orthologous sequence - C.intestinalis:632 P.ramorum:582

F7AKQ3              	100.00%		H3H0Y2              	100.00%
Bootstrap support for F7AKQ3 as seed ortholog is 100%.
Bootstrap support for H3H0Y2 as seed ortholog is 100%.

Group of orthologs #87. Best score 714 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 P.ramorum:714

F7B9U5              	100.00%		H3G9Y1              	100.00%
Bootstrap support for F7B9U5 as seed ortholog is 100%.
Bootstrap support for H3G9Y1 as seed ortholog is 100%.

Group of orthologs #88. Best score 713 bits
Score difference with first non-orthologous sequence - C.intestinalis:713 P.ramorum:713

F6TML4              	100.00%		H3GAU9              	100.00%
Bootstrap support for F6TML4 as seed ortholog is 100%.
Bootstrap support for H3GAU9 as seed ortholog is 100%.

Group of orthologs #89. Best score 711 bits
Score difference with first non-orthologous sequence - C.intestinalis:711 P.ramorum:711

F6WUJ1              	100.00%		H3HC97              	100.00%
Bootstrap support for F6WUJ1 as seed ortholog is 100%.
Bootstrap support for H3HC97 as seed ortholog is 100%.

Group of orthologs #90. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:710 P.ramorum:65

F6SI05              	100.00%		H3GR76              	100.00%
Bootstrap support for F6SI05 as seed ortholog is 100%.
Bootstrap support for H3GR76 as seed ortholog is 91%.

Group of orthologs #91. Best score 708 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.ramorum:282

F6ZJN8              	100.00%		H3G9R0              	100.00%
Bootstrap support for F6ZJN8 as seed ortholog is 99%.
Bootstrap support for H3G9R0 as seed ortholog is 100%.

Group of orthologs #92. Best score 706 bits
Score difference with first non-orthologous sequence - C.intestinalis:706 P.ramorum:485

F7AJ84              	100.00%		H3GCT4              	100.00%
Bootstrap support for F7AJ84 as seed ortholog is 100%.
Bootstrap support for H3GCT4 as seed ortholog is 100%.

Group of orthologs #93. Best score 704 bits
Score difference with first non-orthologous sequence - C.intestinalis:704 P.ramorum:704

F6UHM2              	100.00%		H3GAM6              	100.00%
Bootstrap support for F6UHM2 as seed ortholog is 100%.
Bootstrap support for H3GAM6 as seed ortholog is 100%.

Group of orthologs #94. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:700 P.ramorum:622

H2XSX9              	100.00%		H3G8M4              	100.00%
H2XZ08              	33.48%		H3G8L8              	98.96%
F6ZIF2              	22.32%		
F6ZID9              	17.86%		
Bootstrap support for H2XSX9 as seed ortholog is 100%.
Bootstrap support for H3G8M4 as seed ortholog is 100%.

Group of orthologs #95. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:557 P.ramorum:700

F6THC9              	100.00%		H3G8A8              	100.00%
Bootstrap support for F6THC9 as seed ortholog is 100%.
Bootstrap support for H3G8A8 as seed ortholog is 100%.

Group of orthologs #96. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:700 P.ramorum:700

H2XJF3              	100.00%		H3GGG2              	100.00%
Bootstrap support for H2XJF3 as seed ortholog is 100%.
Bootstrap support for H3GGG2 as seed ortholog is 100%.

Group of orthologs #97. Best score 699 bits
Score difference with first non-orthologous sequence - C.intestinalis:699 P.ramorum:616

F6UE02              	100.00%		H3G9F8              	100.00%
Bootstrap support for F6UE02 as seed ortholog is 100%.
Bootstrap support for H3G9F8 as seed ortholog is 100%.

Group of orthologs #98. Best score 699 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 P.ramorum:514

F6YBA5              	100.00%		H3G5V7              	100.00%
Bootstrap support for F6YBA5 as seed ortholog is 100%.
Bootstrap support for H3G5V7 as seed ortholog is 100%.

Group of orthologs #99. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.ramorum:232

F6TIZ3              	100.00%		H3GHD9              	100.00%
Bootstrap support for F6TIZ3 as seed ortholog is 99%.
Bootstrap support for H3GHD9 as seed ortholog is 99%.

Group of orthologs #100. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 P.ramorum:693

F7ANB6              	100.00%		H3G9Q2              	100.00%
Bootstrap support for F7ANB6 as seed ortholog is 100%.
Bootstrap support for H3G9Q2 as seed ortholog is 100%.

Group of orthologs #101. Best score 692 bits
Score difference with first non-orthologous sequence - C.intestinalis:692 P.ramorum:692

F6Z6L6              	100.00%		H3GAX7              	100.00%
Bootstrap support for F6Z6L6 as seed ortholog is 100%.
Bootstrap support for H3GAX7 as seed ortholog is 100%.

Group of orthologs #102. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.ramorum:617

H2XYN5              	100.00%		H3GAK3              	100.00%
                    	       		H3GB63              	83.28%
                    	       		H3GAK4              	82.18%
                    	       		H3H1K9              	72.56%
Bootstrap support for H2XYN5 as seed ortholog is 80%.
Bootstrap support for H3GAK3 as seed ortholog is 100%.

Group of orthologs #103. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:690 P.ramorum:690

F6UE33              	100.00%		H3GRC1              	100.00%
Bootstrap support for F6UE33 as seed ortholog is 100%.
Bootstrap support for H3GRC1 as seed ortholog is 100%.

Group of orthologs #104. Best score 685 bits
Score difference with first non-orthologous sequence - C.intestinalis:685 P.ramorum:685

F6R8X1              	100.00%		H3G8X0              	100.00%
Bootstrap support for F6R8X1 as seed ortholog is 100%.
Bootstrap support for H3G8X0 as seed ortholog is 100%.

Group of orthologs #105. Best score 684 bits
Score difference with first non-orthologous sequence - C.intestinalis:684 P.ramorum:684

F6R9H9              	100.00%		H3H1P2              	100.00%
Bootstrap support for F6R9H9 as seed ortholog is 100%.
Bootstrap support for H3H1P2 as seed ortholog is 100%.

Group of orthologs #106. Best score 681 bits
Score difference with first non-orthologous sequence - C.intestinalis:681 P.ramorum:681

F6TPR3              	100.00%		H3G9K5              	100.00%
Bootstrap support for F6TPR3 as seed ortholog is 100%.
Bootstrap support for H3G9K5 as seed ortholog is 100%.

Group of orthologs #107. Best score 681 bits
Score difference with first non-orthologous sequence - C.intestinalis:681 P.ramorum:681

F7BEF3              	100.00%		H3G897              	100.00%
Bootstrap support for F7BEF3 as seed ortholog is 100%.
Bootstrap support for H3G897 as seed ortholog is 100%.

Group of orthologs #108. Best score 680 bits
Score difference with first non-orthologous sequence - C.intestinalis:680 P.ramorum:680

F6RHA1              	100.00%		H3G952              	100.00%
Bootstrap support for F6RHA1 as seed ortholog is 100%.
Bootstrap support for H3G952 as seed ortholog is 100%.

Group of orthologs #109. Best score 680 bits
Score difference with first non-orthologous sequence - C.intestinalis:680 P.ramorum:680

F7BJC2              	100.00%		H3G891              	100.00%
Bootstrap support for F7BJC2 as seed ortholog is 100%.
Bootstrap support for H3G891 as seed ortholog is 100%.

Group of orthologs #110. Best score 679 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 P.ramorum:486

F7AXK5              	100.00%		H3G582              	100.00%
                    	       		H3H2J9              	34.97%
                    	       		H3G579              	18.40%
                    	       		H3H2L1              	5.11%
Bootstrap support for F7AXK5 as seed ortholog is 100%.
Bootstrap support for H3G582 as seed ortholog is 100%.

Group of orthologs #111. Best score 678 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:326

A2SY09              	100.00%		H3G9B9              	100.00%
F6SCP4              	71.60%		H3G9B8              	21.43%
F6QBJ1              	49.38%		
L7N0T1              	44.44%		
F6T8C7              	43.21%		
F6SDC9              	43.21%		
Bootstrap support for A2SY09 as seed ortholog is 99%.
Bootstrap support for H3G9B9 as seed ortholog is 100%.

Group of orthologs #112. Best score 678 bits
Score difference with first non-orthologous sequence - C.intestinalis:678 P.ramorum:526

F6SI53              	100.00%		H3GIQ9              	100.00%
Bootstrap support for F6SI53 as seed ortholog is 100%.
Bootstrap support for H3GIQ9 as seed ortholog is 100%.

Group of orthologs #113. Best score 677 bits
Score difference with first non-orthologous sequence - C.intestinalis:677 P.ramorum:677

F7B8G8              	100.00%		H3G7T2              	100.00%
Bootstrap support for F7B8G8 as seed ortholog is 100%.
Bootstrap support for H3G7T2 as seed ortholog is 100%.

Group of orthologs #114. Best score 675 bits
Score difference with first non-orthologous sequence - C.intestinalis:675 P.ramorum:675

H2XVY7              	100.00%		H3G982              	100.00%
Bootstrap support for H2XVY7 as seed ortholog is 100%.
Bootstrap support for H3G982 as seed ortholog is 100%.

Group of orthologs #115. Best score 672 bits
Score difference with first non-orthologous sequence - C.intestinalis:672 P.ramorum:672

F6W7K5              	100.00%		H3GB16              	100.00%
F6W7I3              	80.45%		
Bootstrap support for F6W7K5 as seed ortholog is 100%.
Bootstrap support for H3GB16 as seed ortholog is 100%.

Group of orthologs #116. Best score 670 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 P.ramorum:353

F6RHK8              	100.00%		H3G873              	100.00%
Bootstrap support for F6RHK8 as seed ortholog is 100%.
Bootstrap support for H3G873 as seed ortholog is 100%.

Group of orthologs #117. Best score 670 bits
Score difference with first non-orthologous sequence - C.intestinalis:670 P.ramorum:670

F6Q0D8              	100.00%		H3HCY3              	100.00%
Bootstrap support for F6Q0D8 as seed ortholog is 100%.
Bootstrap support for H3HCY3 as seed ortholog is 100%.

Group of orthologs #118. Best score 665 bits
Score difference with first non-orthologous sequence - C.intestinalis:665 P.ramorum:454

F7AEZ3              	100.00%		H3G8P1              	100.00%
Bootstrap support for F7AEZ3 as seed ortholog is 100%.
Bootstrap support for H3G8P1 as seed ortholog is 100%.

Group of orthologs #119. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 P.ramorum:432

H2XL55              	100.00%		H3GUH6              	100.00%
Bootstrap support for H2XL55 as seed ortholog is 99%.
Bootstrap support for H3GUH6 as seed ortholog is 100%.

Group of orthologs #120. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 P.ramorum:594

F6W785              	100.00%		H3G835              	100.00%
Bootstrap support for F6W785 as seed ortholog is 100%.
Bootstrap support for H3G835 as seed ortholog is 100%.

Group of orthologs #121. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 P.ramorum:659

F6YFY0              	100.00%		H3G8J5              	100.00%
Bootstrap support for F6YFY0 as seed ortholog is 100%.
Bootstrap support for H3G8J5 as seed ortholog is 100%.

Group of orthologs #122. Best score 657 bits
Score difference with first non-orthologous sequence - C.intestinalis:657 P.ramorum:481

F6PZ06              	100.00%		H3GLH3              	100.00%
Bootstrap support for F6PZ06 as seed ortholog is 100%.
Bootstrap support for H3GLH3 as seed ortholog is 100%.

Group of orthologs #123. Best score 655 bits
Score difference with first non-orthologous sequence - C.intestinalis:655 P.ramorum:570

F6QXK6              	100.00%		H3GA28              	100.00%
Bootstrap support for F6QXK6 as seed ortholog is 100%.
Bootstrap support for H3GA28 as seed ortholog is 100%.

Group of orthologs #124. Best score 654 bits
Score difference with first non-orthologous sequence - C.intestinalis:654 P.ramorum:220

H2XPG3              	100.00%		H3GVL3              	100.00%
Bootstrap support for H2XPG3 as seed ortholog is 100%.
Bootstrap support for H3GVL3 as seed ortholog is 76%.

Group of orthologs #125. Best score 653 bits
Score difference with first non-orthologous sequence - C.intestinalis:606 P.ramorum:145

F6XJ08              	100.00%		H3G8G8              	100.00%
Bootstrap support for F6XJ08 as seed ortholog is 100%.
Bootstrap support for H3G8G8 as seed ortholog is 99%.

Group of orthologs #126. Best score 650 bits
Score difference with first non-orthologous sequence - C.intestinalis:650 P.ramorum:650

F6Z761              	100.00%		H3G9K7              	100.00%
Bootstrap support for F6Z761 as seed ortholog is 100%.
Bootstrap support for H3G9K7 as seed ortholog is 100%.

Group of orthologs #127. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:649 P.ramorum:649

F6XY03              	100.00%		H3GCK5              	100.00%
Bootstrap support for F6XY03 as seed ortholog is 100%.
Bootstrap support for H3GCK5 as seed ortholog is 100%.

Group of orthologs #128. Best score 647 bits
Score difference with first non-orthologous sequence - C.intestinalis:647 P.ramorum:170

F6U7R9              	100.00%		H3G910              	100.00%
                    	       		H3GCI6              	56.32%
Bootstrap support for F6U7R9 as seed ortholog is 100%.
Bootstrap support for H3G910 as seed ortholog is 99%.

Group of orthologs #129. Best score 647 bits
Score difference with first non-orthologous sequence - C.intestinalis:647 P.ramorum:647

F6Z4G6              	100.00%		H3GAS2              	100.00%
Bootstrap support for F6Z4G6 as seed ortholog is 100%.
Bootstrap support for H3GAS2 as seed ortholog is 100%.

Group of orthologs #130. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:643 P.ramorum:497

F6YTL6              	100.00%		H3G8K6              	100.00%
Bootstrap support for F6YTL6 as seed ortholog is 100%.
Bootstrap support for H3G8K6 as seed ortholog is 100%.

Group of orthologs #131. Best score 642 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 P.ramorum:435

F6XF93              	100.00%		H3GA17              	100.00%
Bootstrap support for F6XF93 as seed ortholog is 100%.
Bootstrap support for H3GA17 as seed ortholog is 100%.

Group of orthologs #132. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:637 P.ramorum:228

F6R854              	100.00%		H3G8C9              	100.00%
Bootstrap support for F6R854 as seed ortholog is 100%.
Bootstrap support for H3G8C9 as seed ortholog is 100%.

Group of orthologs #133. Best score 635 bits
Score difference with first non-orthologous sequence - C.intestinalis:635 P.ramorum:635

F6SBF1              	100.00%		H3G9H3              	100.00%
Bootstrap support for F6SBF1 as seed ortholog is 100%.
Bootstrap support for H3G9H3 as seed ortholog is 100%.

Group of orthologs #134. Best score 634 bits
Score difference with first non-orthologous sequence - C.intestinalis:634 P.ramorum:634

F6ZM86              	100.00%		H3G9A5              	100.00%
Bootstrap support for F6ZM86 as seed ortholog is 100%.
Bootstrap support for H3G9A5 as seed ortholog is 100%.

Group of orthologs #135. Best score 632 bits
Score difference with first non-orthologous sequence - C.intestinalis:632 P.ramorum:632

F6XTJ3              	100.00%		H3G9G8              	100.00%
Bootstrap support for F6XTJ3 as seed ortholog is 100%.
Bootstrap support for H3G9G8 as seed ortholog is 100%.

Group of orthologs #136. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 P.ramorum:631

F6PST3              	100.00%		H3G9F4              	100.00%
Bootstrap support for F6PST3 as seed ortholog is 100%.
Bootstrap support for H3G9F4 as seed ortholog is 100%.

Group of orthologs #137. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:630 P.ramorum:630

H2XLC6              	100.00%		H3HC02              	100.00%
Bootstrap support for H2XLC6 as seed ortholog is 100%.
Bootstrap support for H3HC02 as seed ortholog is 100%.

Group of orthologs #138. Best score 629 bits
Score difference with first non-orthologous sequence - C.intestinalis:629 P.ramorum:629

F6U2M6              	100.00%		H3G970              	100.00%
Bootstrap support for F6U2M6 as seed ortholog is 100%.
Bootstrap support for H3G970 as seed ortholog is 100%.

Group of orthologs #139. Best score 629 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 P.ramorum:392

H2XS20              	100.00%		H3G649              	100.00%
Bootstrap support for H2XS20 as seed ortholog is 100%.
Bootstrap support for H3G649 as seed ortholog is 100%.

Group of orthologs #140. Best score 629 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 P.ramorum:629

F6XUS6              	100.00%		H3GQF9              	100.00%
Bootstrap support for F6XUS6 as seed ortholog is 100%.
Bootstrap support for H3GQF9 as seed ortholog is 100%.

Group of orthologs #141. Best score 627 bits
Score difference with first non-orthologous sequence - C.intestinalis:627 P.ramorum:627

F6WTE3              	100.00%		H3G9C4              	100.00%
Bootstrap support for F6WTE3 as seed ortholog is 100%.
Bootstrap support for H3G9C4 as seed ortholog is 100%.

Group of orthologs #142. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:625 P.ramorum:625

F6XMA0              	100.00%		H3GA85              	100.00%
Bootstrap support for F6XMA0 as seed ortholog is 100%.
Bootstrap support for H3GA85 as seed ortholog is 100%.

Group of orthologs #143. Best score 622 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 P.ramorum:622

F6VRU1              	100.00%		H3GAE7              	100.00%
Bootstrap support for F6VRU1 as seed ortholog is 100%.
Bootstrap support for H3GAE7 as seed ortholog is 100%.

Group of orthologs #144. Best score 620 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 P.ramorum:447

F7B2M5              	100.00%		H3GV59              	100.00%
Bootstrap support for F7B2M5 as seed ortholog is 100%.
Bootstrap support for H3GV59 as seed ortholog is 100%.

Group of orthologs #145. Best score 618 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 P.ramorum:618

F7B0J8              	100.00%		H3H1T8              	100.00%
Bootstrap support for F7B0J8 as seed ortholog is 100%.
Bootstrap support for H3H1T8 as seed ortholog is 100%.

Group of orthologs #146. Best score 617 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 P.ramorum:450

F6T9M1              	100.00%		H3HD78              	100.00%
Bootstrap support for F6T9M1 as seed ortholog is 100%.
Bootstrap support for H3HD78 as seed ortholog is 100%.

Group of orthologs #147. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 P.ramorum:449

F6Z194              	100.00%		H3G9Z6              	100.00%
Bootstrap support for F6Z194 as seed ortholog is 100%.
Bootstrap support for H3G9Z6 as seed ortholog is 100%.

Group of orthologs #148. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:613 P.ramorum:613

F6Z3T2              	100.00%		H3HDI3              	100.00%
Bootstrap support for F6Z3T2 as seed ortholog is 100%.
Bootstrap support for H3HDI3 as seed ortholog is 100%.

Group of orthologs #149. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:611 P.ramorum:611

H2XTU1              	100.00%		H3HCV8              	100.00%
Bootstrap support for H2XTU1 as seed ortholog is 100%.
Bootstrap support for H3HCV8 as seed ortholog is 100%.

Group of orthologs #150. Best score 610 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 P.ramorum:558

F6TZX4              	100.00%		H3G7N9              	100.00%
Bootstrap support for F6TZX4 as seed ortholog is 100%.
Bootstrap support for H3G7N9 as seed ortholog is 100%.

Group of orthologs #151. Best score 610 bits
Score difference with first non-orthologous sequence - C.intestinalis:610 P.ramorum:330

F6Y1Q3              	100.00%		H3G5J3              	100.00%
Bootstrap support for F6Y1Q3 as seed ortholog is 100%.
Bootstrap support for H3G5J3 as seed ortholog is 100%.

Group of orthologs #152. Best score 610 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 P.ramorum:411

F6UWX3              	100.00%		H3HAM1              	100.00%
Bootstrap support for F6UWX3 as seed ortholog is 100%.
Bootstrap support for H3HAM1 as seed ortholog is 100%.

Group of orthologs #153. Best score 609 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 P.ramorum:337

Q1RPW7              	100.00%		H3GH04              	100.00%
Bootstrap support for Q1RPW7 as seed ortholog is 100%.
Bootstrap support for H3GH04 as seed ortholog is 100%.

Group of orthologs #154. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:608 P.ramorum:608

F6QB99              	100.00%		H3G8B1              	100.00%
Bootstrap support for F6QB99 as seed ortholog is 100%.
Bootstrap support for H3G8B1 as seed ortholog is 100%.

Group of orthologs #155. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 P.ramorum:605

F6Q0U4              	100.00%		H3G985              	100.00%
Bootstrap support for F6Q0U4 as seed ortholog is 100%.
Bootstrap support for H3G985 as seed ortholog is 100%.

Group of orthologs #156. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:604 P.ramorum:604

F6YQS6              	100.00%		H3H6L0              	100.00%
                    	       		H3G744              	37.99%
Bootstrap support for F6YQS6 as seed ortholog is 100%.
Bootstrap support for H3H6L0 as seed ortholog is 100%.

Group of orthologs #157. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:602 P.ramorum:602

F6R2U8              	100.00%		H3G6X3              	100.00%
                    	       		H3GAH5              	97.13%
Bootstrap support for F6R2U8 as seed ortholog is 100%.
Bootstrap support for H3G6X3 as seed ortholog is 100%.

Group of orthologs #158. Best score 599 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 P.ramorum:372

F6SBC7              	100.00%		H3G975              	100.00%
Bootstrap support for F6SBC7 as seed ortholog is 100%.
Bootstrap support for H3G975 as seed ortholog is 100%.

Group of orthologs #159. Best score 598 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.ramorum:598

F6PMK8              	100.00%		H3GAE1              	100.00%
Bootstrap support for F6PMK8 as seed ortholog is 87%.
Bootstrap support for H3GAE1 as seed ortholog is 100%.

Group of orthologs #160. Best score 597 bits
Score difference with first non-orthologous sequence - C.intestinalis:597 P.ramorum:597

F6VGC6              	100.00%		H3GVH6              	100.00%
Bootstrap support for F6VGC6 as seed ortholog is 100%.
Bootstrap support for H3GVH6 as seed ortholog is 100%.

Group of orthologs #161. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:596 P.ramorum:596

H2XQ18              	100.00%		H3GA36              	100.00%
Bootstrap support for H2XQ18 as seed ortholog is 100%.
Bootstrap support for H3GA36 as seed ortholog is 100%.

Group of orthologs #162. Best score 595 bits
Score difference with first non-orthologous sequence - C.intestinalis:595 P.ramorum:370

F6SSP0              	100.00%		H3G6T5              	100.00%
Bootstrap support for F6SSP0 as seed ortholog is 100%.
Bootstrap support for H3G6T5 as seed ortholog is 100%.

Group of orthologs #163. Best score 595 bits
Score difference with first non-orthologous sequence - C.intestinalis:595 P.ramorum:358

F6THL0              	100.00%		H3GGH5              	100.00%
Bootstrap support for F6THL0 as seed ortholog is 100%.
Bootstrap support for H3GGH5 as seed ortholog is 100%.

Group of orthologs #164. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:594 P.ramorum:211

F7AK99              	100.00%		H3GCX9              	100.00%
Bootstrap support for F7AK99 as seed ortholog is 100%.
Bootstrap support for H3GCX9 as seed ortholog is 99%.

Group of orthologs #165. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 P.ramorum:139

F6YK55              	100.00%		H3HCL6              	100.00%
Bootstrap support for F6YK55 as seed ortholog is 100%.
Bootstrap support for H3HCL6 as seed ortholog is 98%.

Group of orthologs #166. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.ramorum:494

F6YUT1              	100.00%		H3GTN8              	100.00%
                    	       		H3GS01              	32.07%
Bootstrap support for F6YUT1 as seed ortholog is 99%.
Bootstrap support for H3GTN8 as seed ortholog is 100%.

Group of orthologs #167. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:593 P.ramorum:352

F6Q9P9              	100.00%		H3G8E4              	100.00%
Bootstrap support for F6Q9P9 as seed ortholog is 100%.
Bootstrap support for H3G8E4 as seed ortholog is 100%.

Group of orthologs #168. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.ramorum:210

F7AXJ1              	100.00%		H3GA43              	100.00%
Bootstrap support for F7AXJ1 as seed ortholog is 99%.
Bootstrap support for H3GA43 as seed ortholog is 100%.

Group of orthologs #169. Best score 590 bits
Score difference with first non-orthologous sequence - C.intestinalis:590 P.ramorum:590

F6WAZ5              	100.00%		H3G5V5              	100.00%
Bootstrap support for F6WAZ5 as seed ortholog is 100%.
Bootstrap support for H3G5V5 as seed ortholog is 100%.

Group of orthologs #170. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 P.ramorum:536

F6UMX9              	100.00%		H3G9L6              	100.00%
Bootstrap support for F6UMX9 as seed ortholog is 100%.
Bootstrap support for H3G9L6 as seed ortholog is 100%.

Group of orthologs #171. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:589 P.ramorum:589

F6VRH3              	100.00%		H3GD86              	100.00%
Bootstrap support for F6VRH3 as seed ortholog is 100%.
Bootstrap support for H3GD86 as seed ortholog is 100%.

Group of orthologs #172. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 P.ramorum:587

F6QIX3              	100.00%		H3GEH1              	100.00%
Bootstrap support for F6QIX3 as seed ortholog is 100%.
Bootstrap support for H3GEH1 as seed ortholog is 100%.

Group of orthologs #173. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 P.ramorum:394

F6TMJ9              	100.00%		H3G926              	100.00%
Bootstrap support for F6TMJ9 as seed ortholog is 100%.
Bootstrap support for H3G926 as seed ortholog is 100%.

Group of orthologs #174. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 P.ramorum:246

F6Y8H4              	100.00%		H3GLF9              	100.00%
Bootstrap support for F6Y8H4 as seed ortholog is 99%.
Bootstrap support for H3GLF9 as seed ortholog is 100%.

Group of orthologs #175. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:586 P.ramorum:586

F6V9G2              	100.00%		H3G5B1              	100.00%
Bootstrap support for F6V9G2 as seed ortholog is 100%.
Bootstrap support for H3G5B1 as seed ortholog is 100%.

Group of orthologs #176. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:586 P.ramorum:366

F7AUJ3              	100.00%		H3G6K6              	100.00%
Bootstrap support for F7AUJ3 as seed ortholog is 100%.
Bootstrap support for H3G6K6 as seed ortholog is 100%.

Group of orthologs #177. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 P.ramorum:586

H2XSM0              	100.00%		H3GSI3              	100.00%
Bootstrap support for H2XSM0 as seed ortholog is 99%.
Bootstrap support for H3GSI3 as seed ortholog is 100%.

Group of orthologs #178. Best score 585 bits
Score difference with first non-orthologous sequence - C.intestinalis:585 P.ramorum:585

F6ZP18              	100.00%		H3GP75              	100.00%
Bootstrap support for F6ZP18 as seed ortholog is 100%.
Bootstrap support for H3GP75 as seed ortholog is 100%.

Group of orthologs #179. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 P.ramorum:517

F6Z8I3              	100.00%		H3G6T4              	100.00%
                    	       		H3GQ77              	19.93%
Bootstrap support for F6Z8I3 as seed ortholog is 100%.
Bootstrap support for H3G6T4 as seed ortholog is 100%.

Group of orthologs #180. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 P.ramorum:95

F7B875              	100.00%		H3GZK5              	100.00%
                    	       		H3G5B5              	14.03%
Bootstrap support for F7B875 as seed ortholog is 100%.
Bootstrap support for H3GZK5 as seed ortholog is 94%.

Group of orthologs #181. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 P.ramorum:392

F6TWF6              	100.00%		H3G893              	100.00%
Bootstrap support for F6TWF6 as seed ortholog is 100%.
Bootstrap support for H3G893 as seed ortholog is 100%.

Group of orthologs #182. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 P.ramorum:582

F6V5U6              	100.00%		H3G978              	100.00%
Bootstrap support for F6V5U6 as seed ortholog is 100%.
Bootstrap support for H3G978 as seed ortholog is 100%.

Group of orthologs #183. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 P.ramorum:582

F6YXI8              	100.00%		H3G5N2              	100.00%
Bootstrap support for F6YXI8 as seed ortholog is 100%.
Bootstrap support for H3G5N2 as seed ortholog is 100%.

Group of orthologs #184. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 P.ramorum:582

F7BA18              	100.00%		H3G7X1              	100.00%
Bootstrap support for F7BA18 as seed ortholog is 100%.
Bootstrap support for H3G7X1 as seed ortholog is 100%.

Group of orthologs #185. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 P.ramorum:355

F6RKM9              	100.00%		H3G6I6              	100.00%
Bootstrap support for F6RKM9 as seed ortholog is 100%.
Bootstrap support for H3G6I6 as seed ortholog is 100%.

Group of orthologs #186. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 P.ramorum:337

F6YEG0              	100.00%		H3G841              	100.00%
Bootstrap support for F6YEG0 as seed ortholog is 100%.
Bootstrap support for H3G841 as seed ortholog is 100%.

Group of orthologs #187. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.ramorum:179

F7AVY6              	100.00%		H3G566              	100.00%
Bootstrap support for F7AVY6 as seed ortholog is 99%.
Bootstrap support for H3G566 as seed ortholog is 99%.

Group of orthologs #188. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.ramorum:177

H2XQT6              	100.00%		H3GAS7              	100.00%
Bootstrap support for H2XQT6 as seed ortholog is 99%.
Bootstrap support for H3GAS7 as seed ortholog is 99%.

Group of orthologs #189. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.ramorum:150

H2XSE7              	100.00%		H3G8I6              	100.00%
F6W5P6              	5.84%		H3G8I3              	68.07%
                    	       		H3G8I2              	57.43%
                    	       		H3G5S9              	42.08%
Bootstrap support for H2XSE7 as seed ortholog is 98%.
Bootstrap support for H3G8I6 as seed ortholog is 100%.

Group of orthologs #190. Best score 575 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 P.ramorum:575

H2XYB0              	100.00%		H3G9T1              	100.00%
Bootstrap support for H2XYB0 as seed ortholog is 99%.
Bootstrap support for H3G9T1 as seed ortholog is 100%.

Group of orthologs #191. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 P.ramorum:383

F7B898              	100.00%		H3G996              	100.00%
Bootstrap support for F7B898 as seed ortholog is 100%.
Bootstrap support for H3G996 as seed ortholog is 100%.

Group of orthologs #192. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:572 P.ramorum:330

F6VEU9              	100.00%		H3G9G0              	100.00%
Bootstrap support for F6VEU9 as seed ortholog is 100%.
Bootstrap support for H3G9G0 as seed ortholog is 100%.

Group of orthologs #193. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 P.ramorum:439

F6WTM4              	100.00%		H3GA86              	100.00%
Bootstrap support for F6WTM4 as seed ortholog is 100%.
Bootstrap support for H3GA86 as seed ortholog is 100%.

Group of orthologs #194. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:489 P.ramorum:49

F6XZ93              	100.00%		H3GAG9              	100.00%
Bootstrap support for F6XZ93 as seed ortholog is 100%.
Bootstrap support for H3GAG9 as seed ortholog is 89%.

Group of orthologs #195. Best score 570 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 P.ramorum:139

F6Y1K6              	100.00%		H3GAS5              	100.00%
F6Q5E4              	65.25%		
Bootstrap support for F6Y1K6 as seed ortholog is 100%.
Bootstrap support for H3GAS5 as seed ortholog is 100%.

Group of orthologs #196. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:569 P.ramorum:569

F6ZF70              	100.00%		H3G9I7              	100.00%
F6QFH5              	7.82%		H3GA90              	100.00%
Bootstrap support for F6ZF70 as seed ortholog is 100%.
Bootstrap support for H3G9I7 as seed ortholog is 100%.
Bootstrap support for H3GA90 as seed ortholog is 100%.

Group of orthologs #197. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.ramorum:569

F6X189              	100.00%		H3G842              	100.00%
Bootstrap support for F6X189 as seed ortholog is 99%.
Bootstrap support for H3G842 as seed ortholog is 100%.

Group of orthologs #198. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 P.ramorum:566

F6PL95              	100.00%		H3G9W6              	100.00%
Bootstrap support for F6PL95 as seed ortholog is 100%.
Bootstrap support for H3G9W6 as seed ortholog is 100%.

Group of orthologs #199. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:566 P.ramorum:566

F6UWK1              	100.00%		H3G7L3              	100.00%
Bootstrap support for F6UWK1 as seed ortholog is 100%.
Bootstrap support for H3G7L3 as seed ortholog is 100%.

Group of orthologs #200. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:566 P.ramorum:407

F6XKP0              	100.00%		H3G8D8              	100.00%
Bootstrap support for F6XKP0 as seed ortholog is 100%.
Bootstrap support for H3G8D8 as seed ortholog is 100%.

Group of orthologs #201. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:566 P.ramorum:566

F6YXZ3              	100.00%		H3GAM7              	100.00%
Bootstrap support for F6YXZ3 as seed ortholog is 100%.
Bootstrap support for H3GAM7 as seed ortholog is 100%.

Group of orthologs #202. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:565 P.ramorum:565

F7B7H5              	100.00%		H3G9E1              	100.00%
                    	       		H3G9J5              	54.18%
                    	       		H3G6P1              	33.47%
Bootstrap support for F7B7H5 as seed ortholog is 100%.
Bootstrap support for H3G9E1 as seed ortholog is 100%.

Group of orthologs #203. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 P.ramorum:367

F6Z7L9              	100.00%		H3G9P9              	100.00%
                    	       		H3GB14              	100.00%
Bootstrap support for F6Z7L9 as seed ortholog is 100%.
Bootstrap support for H3G9P9 as seed ortholog is 100%.
Bootstrap support for H3GB14 as seed ortholog is 100%.

Group of orthologs #204. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:565 P.ramorum:565

F6YR02              	100.00%		H3G5D6              	100.00%
Bootstrap support for F6YR02 as seed ortholog is 100%.
Bootstrap support for H3G5D6 as seed ortholog is 100%.

Group of orthologs #205. Best score 563 bits
Score difference with first non-orthologous sequence - C.intestinalis:563 P.ramorum:563

F6ZWW6              	100.00%		H3G9E8              	100.00%
Bootstrap support for F6ZWW6 as seed ortholog is 100%.
Bootstrap support for H3G9E8 as seed ortholog is 100%.

Group of orthologs #206. Best score 563 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 P.ramorum:398

F7A1V5              	100.00%		H3GWG5              	100.00%
Bootstrap support for F7A1V5 as seed ortholog is 100%.
Bootstrap support for H3GWG5 as seed ortholog is 100%.

Group of orthologs #207. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:562 P.ramorum:373

F6R4B5              	100.00%		H3GDM7              	100.00%
Bootstrap support for F6R4B5 as seed ortholog is 100%.
Bootstrap support for H3GDM7 as seed ortholog is 100%.

Group of orthologs #208. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:68

F6YUE7              	100.00%		H3H123              	100.00%
Bootstrap support for F6YUE7 as seed ortholog is 99%.
Bootstrap support for H3H123 as seed ortholog is 91%.

Group of orthologs #209. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 P.ramorum:553

F6UGA6              	100.00%		H3G8X6              	100.00%
                    	       		H3G7A9              	6.17%
Bootstrap support for F6UGA6 as seed ortholog is 99%.
Bootstrap support for H3G8X6 as seed ortholog is 100%.

Group of orthologs #210. Best score 551 bits
Score difference with first non-orthologous sequence - C.intestinalis:551 P.ramorum:214

F6YND1              	100.00%		H3GAQ8              	100.00%
Bootstrap support for F6YND1 as seed ortholog is 100%.
Bootstrap support for H3GAQ8 as seed ortholog is 100%.

Group of orthologs #211. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:550 P.ramorum:82

F6TKV3              	100.00%		H3G4X7              	100.00%
Bootstrap support for F6TKV3 as seed ortholog is 100%.
Bootstrap support for H3G4X7 as seed ortholog is 92%.

Group of orthologs #212. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 P.ramorum:550

F6X3R5              	100.00%		H3GT35              	100.00%
Bootstrap support for F6X3R5 as seed ortholog is 99%.
Bootstrap support for H3GT35 as seed ortholog is 100%.

Group of orthologs #213. Best score 548 bits
Score difference with first non-orthologous sequence - C.intestinalis:548 P.ramorum:124

F6T957              	100.00%		H3GAR9              	100.00%
Bootstrap support for F6T957 as seed ortholog is 100%.
Bootstrap support for H3GAR9 as seed ortholog is 99%.

Group of orthologs #214. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:547 P.ramorum:547

F6T5V0              	100.00%		H3G8W2              	100.00%
Bootstrap support for F6T5V0 as seed ortholog is 100%.
Bootstrap support for H3G8W2 as seed ortholog is 100%.

Group of orthologs #215. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.ramorum:11

F6YDI9              	100.00%		H3G8M9              	100.00%
Bootstrap support for F6YDI9 as seed ortholog is 99%.
Bootstrap support for H3G8M9 as seed ortholog is 62%.
Alternative seed ortholog is H3G8C8 (11 bits away from this cluster)

Group of orthologs #216. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 P.ramorum:449

F6SBG8              	100.00%		H3GM71              	100.00%
Bootstrap support for F6SBG8 as seed ortholog is 100%.
Bootstrap support for H3GM71 as seed ortholog is 100%.

Group of orthologs #217. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:546 P.ramorum:496

F6Z3U3              	100.00%		H3G9Z1              	100.00%
Bootstrap support for F6Z3U3 as seed ortholog is 100%.
Bootstrap support for H3G9Z1 as seed ortholog is 100%.

Group of orthologs #218. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:546 P.ramorum:546

F7B580              	100.00%		H3G852              	100.00%
Bootstrap support for F7B580 as seed ortholog is 100%.
Bootstrap support for H3G852 as seed ortholog is 100%.

Group of orthologs #219. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.ramorum:50

F6WRK8              	100.00%		H3GVD7              	100.00%
                    	       		H3GWW2              	6.45%
                    	       		H3H128              	5.20%
Bootstrap support for F6WRK8 as seed ortholog is 91%.
Bootstrap support for H3GVD7 as seed ortholog is 74%.
Alternative seed ortholog is H3GD90 (50 bits away from this cluster)

Group of orthologs #220. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 P.ramorum:389

F6Q106              	100.00%		H3G9H5              	100.00%
                    	       		H3GQ69              	100.00%
Bootstrap support for F6Q106 as seed ortholog is 100%.
Bootstrap support for H3G9H5 as seed ortholog is 100%.
Bootstrap support for H3GQ69 as seed ortholog is 100%.

Group of orthologs #221. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 P.ramorum:545

F6YKX8              	100.00%		H3G9A1              	100.00%
Bootstrap support for F6YKX8 as seed ortholog is 100%.
Bootstrap support for H3G9A1 as seed ortholog is 100%.

Group of orthologs #222. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 P.ramorum:443

F6U609              	100.00%		H3G8P9              	100.00%
Bootstrap support for F6U609 as seed ortholog is 100%.
Bootstrap support for H3G8P9 as seed ortholog is 100%.

Group of orthologs #223. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 P.ramorum:223

F6WWD5              	100.00%		H3G8K2              	100.00%
Bootstrap support for F6WWD5 as seed ortholog is 100%.
Bootstrap support for H3G8K2 as seed ortholog is 100%.

Group of orthologs #224. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.ramorum:411

F7AED7              	100.00%		H3GRU7              	100.00%
                    	       		H3G534              	7.91%
Bootstrap support for F7AED7 as seed ortholog is 98%.
Bootstrap support for H3GRU7 as seed ortholog is 100%.

Group of orthologs #225. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 P.ramorum:543

F6TDD6              	100.00%		H3G632              	100.00%
Bootstrap support for F6TDD6 as seed ortholog is 100%.
Bootstrap support for H3G632 as seed ortholog is 100%.

Group of orthologs #226. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 P.ramorum:543

F7BBN1              	100.00%		H3GR72              	100.00%
Bootstrap support for F7BBN1 as seed ortholog is 100%.
Bootstrap support for H3GR72 as seed ortholog is 100%.

Group of orthologs #227. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 P.ramorum:541

F6ZC49              	100.00%		H3G986              	100.00%
Bootstrap support for F6ZC49 as seed ortholog is 100%.
Bootstrap support for H3G986 as seed ortholog is 100%.

Group of orthologs #228. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 P.ramorum:350

F7ABF6              	100.00%		H3GFB0              	100.00%
Bootstrap support for F7ABF6 as seed ortholog is 100%.
Bootstrap support for H3GFB0 as seed ortholog is 100%.

Group of orthologs #229. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 P.ramorum:47

F6VAS2              	100.00%		H3G8L9              	100.00%
Bootstrap support for F6VAS2 as seed ortholog is 100%.
Bootstrap support for H3G8L9 as seed ortholog is 95%.

Group of orthologs #230. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 P.ramorum:80

F7A581              	100.00%		H3GKG6              	100.00%
F6R9X0              	100.00%		H3GKG8              	100.00%
Bootstrap support for F7A581 as seed ortholog is 100%.
Bootstrap support for F6R9X0 as seed ortholog is 100%.
Bootstrap support for H3GKG6 as seed ortholog is 89%.
Bootstrap support for H3GKG8 as seed ortholog is 84%.

Group of orthologs #231. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 P.ramorum:539

H2XXL7              	100.00%		H3G5Z0              	100.00%
Bootstrap support for H2XXL7 as seed ortholog is 100%.
Bootstrap support for H3G5Z0 as seed ortholog is 100%.

Group of orthologs #232. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 P.ramorum:539

F7B5P4              	100.00%		H3GKJ4              	100.00%
Bootstrap support for F7B5P4 as seed ortholog is 100%.
Bootstrap support for H3GKJ4 as seed ortholog is 100%.

Group of orthologs #233. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 P.ramorum:538

F6WKD5              	100.00%		H3H038              	100.00%
Bootstrap support for F6WKD5 as seed ortholog is 100%.
Bootstrap support for H3H038 as seed ortholog is 100%.

Group of orthologs #234. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 P.ramorum:537

F6W453              	100.00%		H3G7L1              	100.00%
Bootstrap support for F6W453 as seed ortholog is 100%.
Bootstrap support for H3G7L1 as seed ortholog is 100%.

Group of orthologs #235. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 P.ramorum:535

F6XH38              	100.00%		H3G7E8              	100.00%
F6ZGX7              	16.02%		
F6ZGZ0              	14.06%		
Bootstrap support for F6XH38 as seed ortholog is 100%.
Bootstrap support for H3G7E8 as seed ortholog is 100%.

Group of orthologs #236. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 P.ramorum:315

H2XJZ4              	100.00%		H3HAQ3              	100.00%
Bootstrap support for H2XJZ4 as seed ortholog is 100%.
Bootstrap support for H3HAQ3 as seed ortholog is 100%.

Group of orthologs #237. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.ramorum:188

F6UHH9              	100.00%		H3G9I9              	100.00%
Bootstrap support for F6UHH9 as seed ortholog is 99%.
Bootstrap support for H3G9I9 as seed ortholog is 99%.

Group of orthologs #238. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 P.ramorum:534

F7BL51              	100.00%		H3G8H8              	100.00%
Bootstrap support for F7BL51 as seed ortholog is 100%.
Bootstrap support for H3G8H8 as seed ortholog is 100%.

Group of orthologs #239. Best score 533 bits
Score difference with first non-orthologous sequence - C.intestinalis:533 P.ramorum:533

F6VBU5              	100.00%		H3G9L9              	100.00%
Bootstrap support for F6VBU5 as seed ortholog is 100%.
Bootstrap support for H3G9L9 as seed ortholog is 100%.

Group of orthologs #240. Best score 531 bits
Score difference with first non-orthologous sequence - C.intestinalis:531 P.ramorum:124

F7B991              	100.00%		H3HDB5              	100.00%
Bootstrap support for F7B991 as seed ortholog is 100%.
Bootstrap support for H3HDB5 as seed ortholog is 99%.

Group of orthologs #241. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 P.ramorum:530

F6WMK2              	100.00%		H3G6Z8              	100.00%
Bootstrap support for F6WMK2 as seed ortholog is 100%.
Bootstrap support for H3G6Z8 as seed ortholog is 100%.

Group of orthologs #242. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 P.ramorum:530

F7ABS5              	100.00%		H3GM44              	100.00%
Bootstrap support for F7ABS5 as seed ortholog is 100%.
Bootstrap support for H3GM44 as seed ortholog is 100%.

Group of orthologs #243. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 P.ramorum:530

F6XK10              	100.00%		H3H4A7              	100.00%
Bootstrap support for F6XK10 as seed ortholog is 100%.
Bootstrap support for H3H4A7 as seed ortholog is 100%.

Group of orthologs #244. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 P.ramorum:48

H2XJF4              	100.00%		H3G967              	100.00%
Bootstrap support for H2XJF4 as seed ortholog is 100%.
Bootstrap support for H3G967 as seed ortholog is 87%.

Group of orthologs #245. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:527 P.ramorum:527

F6UET6              	100.00%		H3G8K5              	100.00%
Bootstrap support for F6UET6 as seed ortholog is 100%.
Bootstrap support for H3G8K5 as seed ortholog is 100%.

Group of orthologs #246. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:526 P.ramorum:526

F6RMU1              	100.00%		H3GCM9              	100.00%
Bootstrap support for F6RMU1 as seed ortholog is 100%.
Bootstrap support for H3GCM9 as seed ortholog is 100%.

Group of orthologs #247. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 P.ramorum:447

F7AYB9              	100.00%		H3G8K3              	100.00%
Bootstrap support for F7AYB9 as seed ortholog is 100%.
Bootstrap support for H3G8K3 as seed ortholog is 100%.

Group of orthologs #248. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.ramorum:320

F7AA42              	100.00%		H3GTT0              	100.00%
Bootstrap support for F7AA42 as seed ortholog is 100%.
Bootstrap support for H3GTT0 as seed ortholog is 100%.

Group of orthologs #249. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:523 P.ramorum:523

F6ZDC7              	100.00%		H3HD79              	100.00%
Bootstrap support for F6ZDC7 as seed ortholog is 100%.
Bootstrap support for H3HD79 as seed ortholog is 100%.

Group of orthologs #250. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 P.ramorum:522

F6UDU8              	100.00%		H3GSZ4              	100.00%
Bootstrap support for F6UDU8 as seed ortholog is 100%.
Bootstrap support for H3GSZ4 as seed ortholog is 100%.

Group of orthologs #251. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 P.ramorum:520

F6PQ94              	100.00%		H3GVL7              	100.00%
Bootstrap support for F6PQ94 as seed ortholog is 100%.
Bootstrap support for H3GVL7 as seed ortholog is 100%.

Group of orthologs #252. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 P.ramorum:520

F7B6E8              	100.00%		H3G863              	100.00%
Bootstrap support for F7B6E8 as seed ortholog is 100%.
Bootstrap support for H3G863 as seed ortholog is 100%.

Group of orthologs #253. Best score 519 bits
Score difference with first non-orthologous sequence - C.intestinalis:519 P.ramorum:519

H2XKW2              	100.00%		H3GAI9              	100.00%
Bootstrap support for H2XKW2 as seed ortholog is 100%.
Bootstrap support for H3GAI9 as seed ortholog is 100%.

Group of orthologs #254. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:518 P.ramorum:518

F6Y5C7              	100.00%		H3G8D2              	100.00%
Bootstrap support for F6Y5C7 as seed ortholog is 100%.
Bootstrap support for H3G8D2 as seed ortholog is 100%.

Group of orthologs #255. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.ramorum:256

F6TB77              	100.00%		H3G828              	100.00%
Bootstrap support for F6TB77 as seed ortholog is 100%.
Bootstrap support for H3G828 as seed ortholog is 100%.

Group of orthologs #256. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 P.ramorum:232

F6U1L2              	100.00%		H3G9H8              	100.00%
Bootstrap support for F6U1L2 as seed ortholog is 100%.
Bootstrap support for H3G9H8 as seed ortholog is 100%.

Group of orthologs #257. Best score 516 bits
Score difference with first non-orthologous sequence - C.intestinalis:516 P.ramorum:351

F6RIY5              	100.00%		H3GSH8              	100.00%
Bootstrap support for F6RIY5 as seed ortholog is 100%.
Bootstrap support for H3GSH8 as seed ortholog is 100%.

Group of orthologs #258. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 P.ramorum:297

F6TZU9              	100.00%		H3G5M4              	100.00%
Bootstrap support for F6TZU9 as seed ortholog is 100%.
Bootstrap support for H3G5M4 as seed ortholog is 99%.

Group of orthologs #259. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 P.ramorum:514

F6ZBB5              	100.00%		H3GG74              	100.00%
Bootstrap support for F6ZBB5 as seed ortholog is 100%.
Bootstrap support for H3GG74 as seed ortholog is 100%.

Group of orthologs #260. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 P.ramorum:380

Q8T3S5              	100.00%		H3GAE2              	100.00%
Bootstrap support for Q8T3S5 as seed ortholog is 100%.
Bootstrap support for H3GAE2 as seed ortholog is 100%.

Group of orthologs #261. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 P.ramorum:514

H2XZT6              	100.00%		H3GR02              	100.00%
Bootstrap support for H2XZT6 as seed ortholog is 100%.
Bootstrap support for H3GR02 as seed ortholog is 100%.

Group of orthologs #262. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.ramorum:85

F6UY41              	100.00%		H3GK12              	100.00%
                    	       		H3H2Q0              	17.02%
Bootstrap support for F6UY41 as seed ortholog is 94%.
Bootstrap support for H3GK12 as seed ortholog is 86%.

Group of orthologs #263. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:513 P.ramorum:513

F6PNS6              	100.00%		H3GA19              	100.00%
Bootstrap support for F6PNS6 as seed ortholog is 100%.
Bootstrap support for H3GA19 as seed ortholog is 100%.

Group of orthologs #264. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:513 P.ramorum:312

F6WR85              	100.00%		H3GAL9              	100.00%
Bootstrap support for F6WR85 as seed ortholog is 100%.
Bootstrap support for H3GAL9 as seed ortholog is 100%.

Group of orthologs #265. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 P.ramorum:512

F7APS6              	100.00%		H3G920              	100.00%
Bootstrap support for F7APS6 as seed ortholog is 100%.
Bootstrap support for H3G920 as seed ortholog is 100%.

Group of orthologs #266. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 P.ramorum:27

F6RW91              	100.00%		H3GEV6              	100.00%
                    	       		H3HCY4              	5.23%
Bootstrap support for F6RW91 as seed ortholog is 100%.
Bootstrap support for H3GEV6 as seed ortholog is 43%.
Alternative seed ortholog is H3GTE0 (27 bits away from this cluster)

Group of orthologs #267. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 P.ramorum:164

F6TTZ5              	100.00%		H3GUW2              	100.00%
                    	       		H3G7C3              	35.98%
Bootstrap support for F6TTZ5 as seed ortholog is 100%.
Bootstrap support for H3GUW2 as seed ortholog is 99%.

Group of orthologs #268. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.ramorum:510

F7AKV1              	100.00%		H3GFN9              	100.00%
F7ACX7              	12.72%		
Bootstrap support for F7AKV1 as seed ortholog is 100%.
Bootstrap support for H3GFN9 as seed ortholog is 100%.

Group of orthologs #269. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 P.ramorum:510

H2XU13              	100.00%		H3G951              	100.00%
Bootstrap support for H2XU13 as seed ortholog is 100%.
Bootstrap support for H3G951 as seed ortholog is 100%.

Group of orthologs #270. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.ramorum:508

F6XCK4              	100.00%		H3G8U2              	100.00%
Bootstrap support for F6XCK4 as seed ortholog is 92%.
Bootstrap support for H3G8U2 as seed ortholog is 100%.

Group of orthologs #271. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:215

H2XPB4              	100.00%		H3HDI7              	100.00%
                    	       		H3G8F1              	13.76%
Bootstrap support for H2XPB4 as seed ortholog is 98%.
Bootstrap support for H3HDI7 as seed ortholog is 100%.

Group of orthologs #272. Best score 506 bits
Score difference with first non-orthologous sequence - C.intestinalis:506 P.ramorum:506

F6RK00              	100.00%		H3GAC2              	100.00%
Bootstrap support for F6RK00 as seed ortholog is 100%.
Bootstrap support for H3GAC2 as seed ortholog is 100%.

Group of orthologs #273. Best score 506 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.ramorum:241

F6WI66              	100.00%		H3G780              	100.00%
Bootstrap support for F6WI66 as seed ortholog is 94%.
Bootstrap support for H3G780 as seed ortholog is 100%.

Group of orthologs #274. Best score 506 bits
Score difference with first non-orthologous sequence - C.intestinalis:506 P.ramorum:386

F6WA81              	100.00%		H3H2Y0              	100.00%
Bootstrap support for F6WA81 as seed ortholog is 100%.
Bootstrap support for H3H2Y0 as seed ortholog is 100%.

Group of orthologs #275. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 P.ramorum:505

F6ZWA3              	100.00%		H3GAA7              	100.00%
Bootstrap support for F6ZWA3 as seed ortholog is 100%.
Bootstrap support for H3GAA7 as seed ortholog is 100%.

Group of orthologs #276. Best score 504 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:146

F6W1L1              	100.00%		H3GAY8              	100.00%
Bootstrap support for F6W1L1 as seed ortholog is 99%.
Bootstrap support for H3GAY8 as seed ortholog is 99%.

Group of orthologs #277. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 P.ramorum:502

F6Y677              	100.00%		H3G905              	100.00%
Bootstrap support for F6Y677 as seed ortholog is 100%.
Bootstrap support for H3G905 as seed ortholog is 100%.

Group of orthologs #278. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 P.ramorum:500

F6R356              	100.00%		H3GUI9              	100.00%
Bootstrap support for F6R356 as seed ortholog is 100%.
Bootstrap support for H3GUI9 as seed ortholog is 100%.

Group of orthologs #279. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 P.ramorum:425

F6WWW4              	100.00%		H3GHE4              	100.00%
Bootstrap support for F6WWW4 as seed ortholog is 100%.
Bootstrap support for H3GHE4 as seed ortholog is 100%.

Group of orthologs #280. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 P.ramorum:499

F7AX62              	100.00%		H3G751              	100.00%
Bootstrap support for F7AX62 as seed ortholog is 100%.
Bootstrap support for H3G751 as seed ortholog is 100%.

Group of orthologs #281. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 P.ramorum:498

F6WBF5              	100.00%		H3GA63              	100.00%
Bootstrap support for F6WBF5 as seed ortholog is 100%.
Bootstrap support for H3GA63 as seed ortholog is 100%.

Group of orthologs #282. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 P.ramorum:317

F7BHP4              	100.00%		H3G4Y1              	100.00%
Bootstrap support for F7BHP4 as seed ortholog is 100%.
Bootstrap support for H3G4Y1 as seed ortholog is 100%.

Group of orthologs #283. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 P.ramorum:496

F6YNG6              	100.00%		H3GAH7              	100.00%
Bootstrap support for F6YNG6 as seed ortholog is 100%.
Bootstrap support for H3GAH7 as seed ortholog is 100%.

Group of orthologs #284. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 P.ramorum:439

F6UHI7              	100.00%		H3G8Z2              	100.00%
                    	       		H3G5L4              	74.75%
Bootstrap support for F6UHI7 as seed ortholog is 100%.
Bootstrap support for H3G8Z2 as seed ortholog is 100%.

Group of orthologs #285. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 P.ramorum:495

F6PYH8              	100.00%		H3G8W5              	100.00%
Bootstrap support for F6PYH8 as seed ortholog is 100%.
Bootstrap support for H3G8W5 as seed ortholog is 100%.

Group of orthologs #286. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.ramorum:495

F6R472              	100.00%		H3G8W1              	100.00%
Bootstrap support for F6R472 as seed ortholog is 99%.
Bootstrap support for H3G8W1 as seed ortholog is 100%.

Group of orthologs #287. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 P.ramorum:366

F6Y4G4              	100.00%		H3GAT3              	100.00%
Bootstrap support for F6Y4G4 as seed ortholog is 100%.
Bootstrap support for H3GAT3 as seed ortholog is 100%.

Group of orthologs #288. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 P.ramorum:493

F6U1G1              	100.00%		H3G8N5              	100.00%
Bootstrap support for F6U1G1 as seed ortholog is 100%.
Bootstrap support for H3G8N5 as seed ortholog is 100%.

Group of orthologs #289. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 P.ramorum:492

F6XKS1              	100.00%		H3G8Z8              	100.00%
H2Y3U6              	11.01%		
F6RQF2              	9.98%		
Bootstrap support for F6XKS1 as seed ortholog is 100%.
Bootstrap support for H3G8Z8 as seed ortholog is 100%.

Group of orthologs #290. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.ramorum:265

F6U113              	100.00%		H3GY14              	100.00%
Bootstrap support for F6U113 as seed ortholog is 99%.
Bootstrap support for H3GY14 as seed ortholog is 99%.

Group of orthologs #291. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 P.ramorum:492

F7A8S2              	100.00%		H3GLA6              	100.00%
Bootstrap support for F7A8S2 as seed ortholog is 100%.
Bootstrap support for H3GLA6 as seed ortholog is 100%.

Group of orthologs #292. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 P.ramorum:407

F7AMH0              	100.00%		H3G5D1              	100.00%
Bootstrap support for F7AMH0 as seed ortholog is 100%.
Bootstrap support for H3G5D1 as seed ortholog is 100%.

Group of orthologs #293. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:489 P.ramorum:489

F6W0L1              	100.00%		H3G764              	100.00%
                    	       		H3G9R8              	80.17%
Bootstrap support for F6W0L1 as seed ortholog is 100%.
Bootstrap support for H3G764 as seed ortholog is 100%.

Group of orthologs #294. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 P.ramorum:100

F6T060              	100.00%		H3GRK8              	100.00%
F6SZU4              	60.71%		H3GRN4              	38.02%
                    	       		H3GRK5              	21.02%
                    	       		H3G6L5              	16.41%
                    	       		H3G8A1              	14.05%
                    	       		H3GRL0              	8.50%
Bootstrap support for F6T060 as seed ortholog is 100%.
Bootstrap support for H3GRK8 as seed ortholog is 97%.

Group of orthologs #295. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 P.ramorum:487

F7BQ30              	100.00%		H3GCH9              	100.00%
Bootstrap support for F7BQ30 as seed ortholog is 100%.
Bootstrap support for H3GCH9 as seed ortholog is 100%.

Group of orthologs #296. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 P.ramorum:373

H2Y2A4              	100.00%		H3G7D3              	100.00%
Bootstrap support for H2Y2A4 as seed ortholog is 100%.
Bootstrap support for H3G7D3 as seed ortholog is 100%.

Group of orthologs #297. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 P.ramorum:363

F6QIK7              	100.00%		H3G5E1              	100.00%
Bootstrap support for F6QIK7 as seed ortholog is 100%.
Bootstrap support for H3G5E1 as seed ortholog is 100%.

Group of orthologs #298. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 P.ramorum:434

F6WIG7              	100.00%		H3GC09              	100.00%
Bootstrap support for F6WIG7 as seed ortholog is 100%.
Bootstrap support for H3GC09 as seed ortholog is 100%.

Group of orthologs #299. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.ramorum:258

F6YKT9              	100.00%		H3G932              	100.00%
Bootstrap support for F6YKT9 as seed ortholog is 80%.
Bootstrap support for H3G932 as seed ortholog is 100%.

Group of orthologs #300. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 P.ramorum:486

F6Z3I0              	100.00%		H3GVT4              	100.00%
Bootstrap support for F6Z3I0 as seed ortholog is 100%.
Bootstrap support for H3GVT4 as seed ortholog is 100%.

Group of orthologs #301. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 P.ramorum:485

F6VVR6              	100.00%		H3G7L4              	100.00%
Bootstrap support for F6VVR6 as seed ortholog is 100%.
Bootstrap support for H3G7L4 as seed ortholog is 100%.

Group of orthologs #302. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 P.ramorum:485

F6TQ79              	100.00%		H3GFF2              	100.00%
Bootstrap support for F6TQ79 as seed ortholog is 100%.
Bootstrap support for H3GFF2 as seed ortholog is 100%.

Group of orthologs #303. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 P.ramorum:485

F7BQ94              	100.00%		H3GAU7              	100.00%
Bootstrap support for F7BQ94 as seed ortholog is 100%.
Bootstrap support for H3GAU7 as seed ortholog is 100%.

Group of orthologs #304. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 P.ramorum:485

F6XL66              	100.00%		H3GWU1              	100.00%
Bootstrap support for F6XL66 as seed ortholog is 100%.
Bootstrap support for H3GWU1 as seed ortholog is 100%.

Group of orthologs #305. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 P.ramorum:273

H2Y3E7              	100.00%		H3G4Y9              	100.00%
Bootstrap support for H2Y3E7 as seed ortholog is 100%.
Bootstrap support for H3G4Y9 as seed ortholog is 100%.

Group of orthologs #306. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 P.ramorum:346

F6SDI7              	100.00%		H3HDS0              	100.00%
Bootstrap support for F6SDI7 as seed ortholog is 82%.
Bootstrap support for H3HDS0 as seed ortholog is 100%.

Group of orthologs #307. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 P.ramorum:484

F6XK22              	100.00%		H3H2G5              	100.00%
Bootstrap support for F6XK22 as seed ortholog is 100%.
Bootstrap support for H3H2G5 as seed ortholog is 100%.

Group of orthologs #308. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.ramorum:134

F6YJQ7              	100.00%		H3GA61              	100.00%
Bootstrap support for F6YJQ7 as seed ortholog is 99%.
Bootstrap support for H3GA61 as seed ortholog is 99%.

Group of orthologs #309. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:402 P.ramorum:400

F6X0I3              	100.00%		H3GAC1              	100.00%
Bootstrap support for F6X0I3 as seed ortholog is 100%.
Bootstrap support for H3GAC1 as seed ortholog is 100%.

Group of orthologs #310. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 P.ramorum:117

F6RHH3              	100.00%		H3GG43              	100.00%
Bootstrap support for F6RHH3 as seed ortholog is 56%.
Alternative seed ortholog is F6XHQ2 (31 bits away from this cluster)
Bootstrap support for H3GG43 as seed ortholog is 99%.

Group of orthologs #311. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 P.ramorum:478

H2Y1C4              	100.00%		H3G6I4              	100.00%
                    	       		H3H5Y3              	38.99%
Bootstrap support for H2Y1C4 as seed ortholog is 100%.
Bootstrap support for H3G6I4 as seed ortholog is 100%.

Group of orthologs #312. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.ramorum:197

F6TVZ8              	100.00%		H3G8F5              	100.00%
Bootstrap support for F6TVZ8 as seed ortholog is 99%.
Bootstrap support for H3G8F5 as seed ortholog is 100%.

Group of orthologs #313. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 P.ramorum:402

F6XCG6              	100.00%		H3GU36              	100.00%
Bootstrap support for F6XCG6 as seed ortholog is 100%.
Bootstrap support for H3GU36 as seed ortholog is 100%.

Group of orthologs #314. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 P.ramorum:475

H2XKN0              	100.00%		H3G704              	100.00%
Bootstrap support for H2XKN0 as seed ortholog is 100%.
Bootstrap support for H3G704 as seed ortholog is 100%.

Group of orthologs #315. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 P.ramorum:474

F6TZ29              	100.00%		H3GPE9              	100.00%
Bootstrap support for F6TZ29 as seed ortholog is 100%.
Bootstrap support for H3GPE9 as seed ortholog is 100%.

Group of orthologs #316. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 P.ramorum:473

F6S6E8              	100.00%		H3G8V7              	100.00%
                    	       		H3G5G8              	47.45%
Bootstrap support for F6S6E8 as seed ortholog is 100%.
Bootstrap support for H3G8V7 as seed ortholog is 100%.

Group of orthologs #317. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 P.ramorum:472

H2XLP3              	100.00%		H3G9L0              	100.00%
Bootstrap support for H2XLP3 as seed ortholog is 100%.
Bootstrap support for H3G9L0 as seed ortholog is 100%.

Group of orthologs #318. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 P.ramorum:472

H2XWW7              	100.00%		H3G7R1              	100.00%
Bootstrap support for H2XWW7 as seed ortholog is 100%.
Bootstrap support for H3G7R1 as seed ortholog is 100%.

Group of orthologs #319. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 P.ramorum:471

F6R7T5              	100.00%		H3GLB1              	100.00%
Bootstrap support for F6R7T5 as seed ortholog is 100%.
Bootstrap support for H3GLB1 as seed ortholog is 100%.

Group of orthologs #320. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 P.ramorum:470

H2XQE4              	100.00%		H3G886              	100.00%
Bootstrap support for H2XQE4 as seed ortholog is 100%.
Bootstrap support for H3G886 as seed ortholog is 100%.

Group of orthologs #321. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 P.ramorum:470

Q1RLG4              	100.00%		H3G6D2              	100.00%
Bootstrap support for Q1RLG4 as seed ortholog is 100%.
Bootstrap support for H3G6D2 as seed ortholog is 100%.

Group of orthologs #322. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 P.ramorum:469

F6UF05              	100.00%		H3GA76              	100.00%
Bootstrap support for F6UF05 as seed ortholog is 100%.
Bootstrap support for H3GA76 as seed ortholog is 100%.

Group of orthologs #323. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 P.ramorum:468

F6TAK8              	100.00%		H3G5F5              	100.00%
                    	       		H3G8X8              	100.00%
                    	       		H3G7K6              	75.12%
Bootstrap support for F6TAK8 as seed ortholog is 100%.
Bootstrap support for H3G5F5 as seed ortholog is 100%.
Bootstrap support for H3G8X8 as seed ortholog is 100%.

Group of orthologs #324. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.ramorum:57

F6ZFK4              	100.00%		H3GQ72              	100.00%
H2XJH1              	18.01%		
Bootstrap support for F6ZFK4 as seed ortholog is 99%.
Bootstrap support for H3GQ72 as seed ortholog is 86%.

Group of orthologs #325. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 P.ramorum:220

F6Z3S0              	100.00%		H3H5G2              	100.00%
Bootstrap support for F6Z3S0 as seed ortholog is 100%.
Bootstrap support for H3H5G2 as seed ortholog is 100%.

Group of orthologs #326. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 P.ramorum:466

F6SG33              	100.00%		H3GA10              	100.00%
Bootstrap support for F6SG33 as seed ortholog is 99%.
Bootstrap support for H3GA10 as seed ortholog is 100%.

Group of orthologs #327. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 P.ramorum:463

F6TD07              	100.00%		H3G4Y5              	100.00%
Bootstrap support for F6TD07 as seed ortholog is 100%.
Bootstrap support for H3G4Y5 as seed ortholog is 100%.

Group of orthologs #328. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 P.ramorum:462

F6QX56              	100.00%		H3G9X8              	100.00%
                    	       		H3GVB8              	65.86%
Bootstrap support for F6QX56 as seed ortholog is 100%.
Bootstrap support for H3G9X8 as seed ortholog is 100%.

Group of orthologs #329. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 P.ramorum:462

H2Y3E3              	100.00%		H3GZE1              	100.00%
Bootstrap support for H2Y3E3 as seed ortholog is 100%.
Bootstrap support for H3GZE1 as seed ortholog is 100%.

Group of orthologs #330. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 P.ramorum:141

F6WBI7              	100.00%		H3GA49              	100.00%
F6WXA3              	54.22%		H3G616              	11.85%
Bootstrap support for F6WBI7 as seed ortholog is 99%.
Bootstrap support for H3GA49 as seed ortholog is 99%.

Group of orthologs #331. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 P.ramorum:359

F6YIL9              	100.00%		H3GAL0              	100.00%
Bootstrap support for F6YIL9 as seed ortholog is 100%.
Bootstrap support for H3GAL0 as seed ortholog is 100%.

Group of orthologs #332. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 P.ramorum:215

F6U8Z7              	100.00%		H3GB46              	100.00%
Bootstrap support for F6U8Z7 as seed ortholog is 100%.
Bootstrap support for H3GB46 as seed ortholog is 100%.

Group of orthologs #333. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 P.ramorum:382

F6X7X8              	100.00%		H3G5C7              	100.00%
Bootstrap support for F6X7X8 as seed ortholog is 100%.
Bootstrap support for H3G5C7 as seed ortholog is 100%.

Group of orthologs #334. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 P.ramorum:333

F6UCG0              	100.00%		H3GTV2              	100.00%
Bootstrap support for F6UCG0 as seed ortholog is 100%.
Bootstrap support for H3GTV2 as seed ortholog is 100%.

Group of orthologs #335. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 P.ramorum:1

H2XXZ7              	100.00%		H3G874              	100.00%
Bootstrap support for H2XXZ7 as seed ortholog is 100%.
Bootstrap support for H3G874 as seed ortholog is 50%.
Alternative seed ortholog is H3G963 (1 bits away from this cluster)

Group of orthologs #336. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:456

F6XIQ9              	100.00%		H3G9S1              	100.00%
Bootstrap support for F6XIQ9 as seed ortholog is 99%.
Bootstrap support for H3G9S1 as seed ortholog is 100%.

Group of orthologs #337. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.ramorum:199

F6U222              	100.00%		H3GX21              	100.00%
Bootstrap support for F6U222 as seed ortholog is 99%.
Bootstrap support for H3GX21 as seed ortholog is 99%.

Group of orthologs #338. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 P.ramorum:455

F6TGK6              	100.00%		H3GZX6              	100.00%
Bootstrap support for F6TGK6 as seed ortholog is 100%.
Bootstrap support for H3GZX6 as seed ortholog is 100%.

Group of orthologs #339. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 P.ramorum:455

F7AHM4              	100.00%		H3GTQ7              	100.00%
Bootstrap support for F7AHM4 as seed ortholog is 100%.
Bootstrap support for H3GTQ7 as seed ortholog is 100%.

Group of orthologs #340. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 P.ramorum:377

F7AQA9              	100.00%		H3G9Z7              	100.00%
                    	       		H3G9Z8              	100.00%
Bootstrap support for F7AQA9 as seed ortholog is 100%.
Bootstrap support for H3G9Z7 as seed ortholog is 100%.
Bootstrap support for H3G9Z8 as seed ortholog is 100%.

Group of orthologs #341. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 P.ramorum:454

F6Y025              	100.00%		H3GED5              	100.00%
Bootstrap support for F6Y025 as seed ortholog is 100%.
Bootstrap support for H3GED5 as seed ortholog is 100%.

Group of orthologs #342. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 P.ramorum:454

F7A5J2              	100.00%		H3G947              	100.00%
Bootstrap support for F7A5J2 as seed ortholog is 100%.
Bootstrap support for H3G947 as seed ortholog is 100%.

Group of orthologs #343. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 P.ramorum:82

F6XJD6              	100.00%		H3H125              	100.00%
F7A8H3              	20.09%		
F7A4Y2              	8.15%		
Bootstrap support for F6XJD6 as seed ortholog is 99%.
Bootstrap support for H3H125 as seed ortholog is 94%.

Group of orthologs #344. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 P.ramorum:450

F6SPZ6              	100.00%		H3H283              	100.00%
Bootstrap support for F6SPZ6 as seed ortholog is 100%.
Bootstrap support for H3H283 as seed ortholog is 100%.

Group of orthologs #345. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 P.ramorum:449

F7BBJ9              	100.00%		H3G928              	100.00%
Bootstrap support for F7BBJ9 as seed ortholog is 100%.
Bootstrap support for H3G928 as seed ortholog is 100%.

Group of orthologs #346. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 P.ramorum:449

H2XLC1              	100.00%		H3G8A9              	100.00%
Bootstrap support for H2XLC1 as seed ortholog is 100%.
Bootstrap support for H3G8A9 as seed ortholog is 100%.

Group of orthologs #347. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 P.ramorum:449

H2XY06              	100.00%		H3GIY0              	100.00%
Bootstrap support for H2XY06 as seed ortholog is 100%.
Bootstrap support for H3GIY0 as seed ortholog is 100%.

Group of orthologs #348. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 P.ramorum:391

F7A5V7              	100.00%		H3HBV5              	100.00%
Bootstrap support for F7A5V7 as seed ortholog is 100%.
Bootstrap support for H3HBV5 as seed ortholog is 100%.

Group of orthologs #349. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 P.ramorum:448

F6YY15              	100.00%		H3GG34              	100.00%
Bootstrap support for F6YY15 as seed ortholog is 100%.
Bootstrap support for H3GG34 as seed ortholog is 100%.

Group of orthologs #350. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 P.ramorum:347

F6UBT3              	100.00%		H3G847              	100.00%
Bootstrap support for F6UBT3 as seed ortholog is 100%.
Bootstrap support for H3G847 as seed ortholog is 100%.

Group of orthologs #351. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 P.ramorum:446

F6WNR2              	100.00%		H3GAV2              	100.00%
Bootstrap support for F6WNR2 as seed ortholog is 100%.
Bootstrap support for H3GAV2 as seed ortholog is 100%.

Group of orthologs #352. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 P.ramorum:377

F6UNP2              	100.00%		H3G782              	100.00%
Bootstrap support for F6UNP2 as seed ortholog is 100%.
Bootstrap support for H3G782 as seed ortholog is 100%.

Group of orthologs #353. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:445 P.ramorum:445

F6VCH9              	100.00%		H3GJC3              	100.00%
Bootstrap support for F6VCH9 as seed ortholog is 100%.
Bootstrap support for H3GJC3 as seed ortholog is 100%.

Group of orthologs #354. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.ramorum:226

F6YGC1              	100.00%		H3GVG1              	100.00%
Bootstrap support for F6YGC1 as seed ortholog is 100%.
Bootstrap support for H3GVG1 as seed ortholog is 100%.

Group of orthologs #355. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 P.ramorum:116

F7BHM4              	100.00%		H3GAA2              	100.00%
Bootstrap support for F7BHM4 as seed ortholog is 99%.
Bootstrap support for H3GAA2 as seed ortholog is 89%.

Group of orthologs #356. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 P.ramorum:444

F6QNL7              	100.00%		H3H7T6              	100.00%
Bootstrap support for F6QNL7 as seed ortholog is 100%.
Bootstrap support for H3H7T6 as seed ortholog is 100%.

Group of orthologs #357. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 P.ramorum:94

H2XLI5              	100.00%		H3G9N8              	100.00%
H2XK85              	63.32%		
Bootstrap support for H2XLI5 as seed ortholog is 100%.
Bootstrap support for H3G9N8 as seed ortholog is 99%.

Group of orthologs #358. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.ramorum:169

F6RCR9              	100.00%		H3G9B3              	100.00%
Bootstrap support for F6RCR9 as seed ortholog is 99%.
Bootstrap support for H3G9B3 as seed ortholog is 99%.

Group of orthologs #359. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 P.ramorum:443

F6XQ09              	100.00%		H3GYM4              	100.00%
Bootstrap support for F6XQ09 as seed ortholog is 100%.
Bootstrap support for H3GYM4 as seed ortholog is 100%.

Group of orthologs #360. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 P.ramorum:211

F6W1D2              	100.00%		H3H2U2              	100.00%
Bootstrap support for F6W1D2 as seed ortholog is 100%.
Bootstrap support for H3H2U2 as seed ortholog is 100%.

Group of orthologs #361. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 P.ramorum:442

F6UH30              	100.00%		H3G856              	100.00%
Bootstrap support for F6UH30 as seed ortholog is 100%.
Bootstrap support for H3G856 as seed ortholog is 100%.

Group of orthologs #362. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 P.ramorum:441

F6XQD4              	100.00%		H3G7I0              	100.00%
Bootstrap support for F6XQD4 as seed ortholog is 100%.
Bootstrap support for H3G7I0 as seed ortholog is 100%.

Group of orthologs #363. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 P.ramorum:441

F6Y1N2              	100.00%		H3GQR2              	100.00%
Bootstrap support for F6Y1N2 as seed ortholog is 100%.
Bootstrap support for H3GQR2 as seed ortholog is 100%.

Group of orthologs #364. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 P.ramorum:115

F6ZI02              	100.00%		H3GA53              	100.00%
H2XY21              	20.50%		H3GWZ3              	73.55%
F7ABR6              	8.41%		H3GWZ5              	64.20%
                    	       		H3GA52              	62.03%
                    	       		H3GAW6              	43.79%
                    	       		H3GAL7              	34.78%
                    	       		H3G5D4              	21.78%
Bootstrap support for F6ZI02 as seed ortholog is 100%.
Bootstrap support for H3GA53 as seed ortholog is 98%.

Group of orthologs #365. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 P.ramorum:95

F6YGU8              	100.00%		H3H542              	100.00%
F6RCK1              	21.03%		H3GZW0              	25.93%
Bootstrap support for F6YGU8 as seed ortholog is 99%.
Bootstrap support for H3H542 as seed ortholog is 95%.

Group of orthologs #366. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 P.ramorum:439

F6PWP3              	100.00%		H3H563              	100.00%
Bootstrap support for F6PWP3 as seed ortholog is 100%.
Bootstrap support for H3H563 as seed ortholog is 100%.

Group of orthologs #367. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.ramorum:24

F6V7V9              	100.00%		H3G9K6              	100.00%
Bootstrap support for F6V7V9 as seed ortholog is 99%.
Bootstrap support for H3G9K6 as seed ortholog is 26%.
Alternative seed ortholog is H3G6Z0 (24 bits away from this cluster)

Group of orthologs #368. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 P.ramorum:437

H2XJF2              	100.00%		H3H3A8              	100.00%
Bootstrap support for H2XJF2 as seed ortholog is 100%.
Bootstrap support for H3H3A8 as seed ortholog is 100%.

Group of orthologs #369. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 P.ramorum:35

F6X2D1              	100.00%		H3GK38              	100.00%
                    	       		H3HBW2              	84.39%
                    	       		H3GK36              	20.14%
                    	       		H3HBW6              	10.51%
Bootstrap support for F6X2D1 as seed ortholog is 100%.
Bootstrap support for H3GK38 as seed ortholog is 69%.
Alternative seed ortholog is H3GU93 (35 bits away from this cluster)

Group of orthologs #370. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 P.ramorum:215

F7AEF7              	100.00%		H3G7Y1              	100.00%
                    	       		H3HDZ1              	52.36%
                    	       		H3G7Y2              	50.26%
Bootstrap support for F7AEF7 as seed ortholog is 100%.
Bootstrap support for H3G7Y1 as seed ortholog is 99%.

Group of orthologs #371. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 P.ramorum:435

F6UTV1              	100.00%		H3G957              	100.00%
Bootstrap support for F6UTV1 as seed ortholog is 100%.
Bootstrap support for H3G957 as seed ortholog is 100%.

Group of orthologs #372. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 P.ramorum:155

F6WYI9              	100.00%		H3GHW8              	100.00%
Bootstrap support for F6WYI9 as seed ortholog is 100%.
Bootstrap support for H3GHW8 as seed ortholog is 100%.

Group of orthologs #373. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 P.ramorum:435

H2XPV7              	100.00%		H3GTK3              	100.00%
Bootstrap support for H2XPV7 as seed ortholog is 100%.
Bootstrap support for H3GTK3 as seed ortholog is 100%.

Group of orthologs #374. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 P.ramorum:434

F6TSV2              	100.00%		H3GPL3              	100.00%
Bootstrap support for F6TSV2 as seed ortholog is 100%.
Bootstrap support for H3GPL3 as seed ortholog is 100%.

Group of orthologs #375. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 P.ramorum:433

F7BMR9              	100.00%		H3G7L5              	100.00%
Bootstrap support for F7BMR9 as seed ortholog is 100%.
Bootstrap support for H3G7L5 as seed ortholog is 100%.

Group of orthologs #376. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 P.ramorum:219

F6QCF9              	100.00%		H3GCA4              	100.00%
F7AUQ0              	22.85%		
H2Y2S0              	16.52%		
Bootstrap support for F6QCF9 as seed ortholog is 100%.
Bootstrap support for H3GCA4 as seed ortholog is 99%.

Group of orthologs #377. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 P.ramorum:269

F6ZCC7              	100.00%		H3G9R9              	100.00%
Bootstrap support for F6ZCC7 as seed ortholog is 100%.
Bootstrap support for H3G9R9 as seed ortholog is 100%.

Group of orthologs #378. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 P.ramorum:432

F7BCV4              	100.00%		H3G9H1              	100.00%
Bootstrap support for F7BCV4 as seed ortholog is 100%.
Bootstrap support for H3G9H1 as seed ortholog is 100%.

Group of orthologs #379. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 P.ramorum:431

F6PG92              	100.00%		H3GAC0              	100.00%
Bootstrap support for F6PG92 as seed ortholog is 100%.
Bootstrap support for H3GAC0 as seed ortholog is 100%.

Group of orthologs #380. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 P.ramorum:343

F6SK29              	100.00%		H3G5G7              	100.00%
Bootstrap support for F6SK29 as seed ortholog is 100%.
Bootstrap support for H3G5G7 as seed ortholog is 100%.

Group of orthologs #381. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 P.ramorum:189

F7ASK1              	100.00%		H3GYF7              	100.00%
Bootstrap support for F7ASK1 as seed ortholog is 100%.
Bootstrap support for H3GYF7 as seed ortholog is 99%.

Group of orthologs #382. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 P.ramorum:431

H2Y288              	100.00%		H3GNQ3              	100.00%
Bootstrap support for H2Y288 as seed ortholog is 100%.
Bootstrap support for H3GNQ3 as seed ortholog is 100%.

Group of orthologs #383. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 P.ramorum:310

H2XVK2              	100.00%		H3G8F6              	100.00%
H2XQD5              	58.55%		H3GED8              	61.09%
Bootstrap support for H2XVK2 as seed ortholog is 100%.
Bootstrap support for H3G8F6 as seed ortholog is 100%.

Group of orthologs #384. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 P.ramorum:429

F6YIU2              	100.00%		H3GVL6              	100.00%
Bootstrap support for F6YIU2 as seed ortholog is 100%.
Bootstrap support for H3GVL6 as seed ortholog is 100%.

Group of orthologs #385. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 P.ramorum:305

F7AVB6              	100.00%		H3GA84              	100.00%
                    	       		H3GA09              	9.96%
Bootstrap support for F7AVB6 as seed ortholog is 100%.
Bootstrap support for H3GA84 as seed ortholog is 100%.

Group of orthologs #386. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.ramorum:215

F6WXR3              	100.00%		H3G5B8              	100.00%
Bootstrap support for F6WXR3 as seed ortholog is 99%.
Bootstrap support for H3G5B8 as seed ortholog is 99%.

Group of orthologs #387. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 P.ramorum:267

F7A713              	100.00%		H3GPJ8              	100.00%
Bootstrap support for F7A713 as seed ortholog is 100%.
Bootstrap support for H3GPJ8 as seed ortholog is 100%.

Group of orthologs #388. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 P.ramorum:427

F6Q601              	100.00%		H3G7F3              	100.00%
Bootstrap support for F6Q601 as seed ortholog is 100%.
Bootstrap support for H3G7F3 as seed ortholog is 100%.

Group of orthologs #389. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 P.ramorum:427

F6WLA0              	100.00%		H3G725              	100.00%
Bootstrap support for F6WLA0 as seed ortholog is 100%.
Bootstrap support for H3G725 as seed ortholog is 100%.

Group of orthologs #390. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 P.ramorum:427

F6X3S3              	100.00%		H3G8R9              	100.00%
Bootstrap support for F6X3S3 as seed ortholog is 100%.
Bootstrap support for H3G8R9 as seed ortholog is 100%.

Group of orthologs #391. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 P.ramorum:427

F6X0V6              	100.00%		H3GGX9              	100.00%
Bootstrap support for F6X0V6 as seed ortholog is 100%.
Bootstrap support for H3GGX9 as seed ortholog is 100%.

Group of orthologs #392. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 P.ramorum:427

F7A7C3              	100.00%		H3GU25              	100.00%
Bootstrap support for F7A7C3 as seed ortholog is 100%.
Bootstrap support for H3GU25 as seed ortholog is 100%.

Group of orthologs #393. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 P.ramorum:195

F6SLC8              	100.00%		H3G8X2              	100.00%
Bootstrap support for F6SLC8 as seed ortholog is 100%.
Bootstrap support for H3G8X2 as seed ortholog is 100%.

Group of orthologs #394. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 P.ramorum:425

F6YVU0              	100.00%		H3GA60              	100.00%
                    	       		H3GXA3              	31.91%
Bootstrap support for F6YVU0 as seed ortholog is 100%.
Bootstrap support for H3GA60 as seed ortholog is 100%.

Group of orthologs #395. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 P.ramorum:424

F6SSW4              	100.00%		H3G851              	100.00%
                    	       		H3GBH1              	41.63%
Bootstrap support for F6SSW4 as seed ortholog is 100%.
Bootstrap support for H3G851 as seed ortholog is 100%.

Group of orthologs #396. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 P.ramorum:423

F6Q8D1              	100.00%		H3GAK0              	100.00%
Bootstrap support for F6Q8D1 as seed ortholog is 100%.
Bootstrap support for H3GAK0 as seed ortholog is 100%.

Group of orthologs #397. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 P.ramorum:423

F6UW46              	100.00%		H3G7L0              	100.00%
Bootstrap support for F6UW46 as seed ortholog is 100%.
Bootstrap support for H3G7L0 as seed ortholog is 100%.

Group of orthologs #398. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 P.ramorum:423

F7BBT3              	100.00%		H3G570              	100.00%
Bootstrap support for F7BBT3 as seed ortholog is 100%.
Bootstrap support for H3G570 as seed ortholog is 100%.

Group of orthologs #399. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 P.ramorum:109

F6Z2U1              	100.00%		H3HE00              	100.00%
Bootstrap support for F6Z2U1 as seed ortholog is 100%.
Bootstrap support for H3HE00 as seed ortholog is 57%.
Alternative seed ortholog is H3G7G7 (109 bits away from this cluster)

Group of orthologs #400. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 P.ramorum:421

F6USH9              	100.00%		H3G9N6              	100.00%
                    	       		H3GAR8              	10.07%
Bootstrap support for F6USH9 as seed ortholog is 100%.
Bootstrap support for H3G9N6 as seed ortholog is 100%.

Group of orthologs #401. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 P.ramorum:421

F6W6L5              	100.00%		H3GAJ9              	100.00%
Bootstrap support for F6W6L5 as seed ortholog is 100%.
Bootstrap support for H3GAJ9 as seed ortholog is 100%.

Group of orthologs #402. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 P.ramorum:421

F6XC92              	100.00%		H3GNL8              	100.00%
Bootstrap support for F6XC92 as seed ortholog is 100%.
Bootstrap support for H3GNL8 as seed ortholog is 100%.

Group of orthologs #403. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 P.ramorum:421

H2XZG0              	100.00%		H3GG11              	100.00%
Bootstrap support for H2XZG0 as seed ortholog is 100%.
Bootstrap support for H3GG11 as seed ortholog is 100%.

Group of orthologs #404. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 P.ramorum:419

F6VZF6              	100.00%		H3G8K7              	100.00%
Bootstrap support for F6VZF6 as seed ortholog is 100%.
Bootstrap support for H3G8K7 as seed ortholog is 100%.

Group of orthologs #405. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 P.ramorum:419

H2XKA9              	100.00%		H3GCB7              	100.00%
Bootstrap support for H2XKA9 as seed ortholog is 100%.
Bootstrap support for H3GCB7 as seed ortholog is 100%.

Group of orthologs #406. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 P.ramorum:419

H2XUM1              	100.00%		H3GBY4              	100.00%
Bootstrap support for H2XUM1 as seed ortholog is 100%.
Bootstrap support for H3GBY4 as seed ortholog is 100%.

Group of orthologs #407. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 P.ramorum:418

F6T1J8              	100.00%		H3G950              	100.00%
Bootstrap support for F6T1J8 as seed ortholog is 99%.
Bootstrap support for H3G950 as seed ortholog is 100%.

Group of orthologs #408. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 P.ramorum:418

F6SH99              	100.00%		H3GIM1              	100.00%
Bootstrap support for F6SH99 as seed ortholog is 100%.
Bootstrap support for H3GIM1 as seed ortholog is 100%.

Group of orthologs #409. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 P.ramorum:286

F7A606              	100.00%		H3GZB3              	100.00%
Bootstrap support for F7A606 as seed ortholog is 100%.
Bootstrap support for H3GZB3 as seed ortholog is 100%.

Group of orthologs #410. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 P.ramorum:418

H2Y130              	100.00%		H3H4C8              	100.00%
Bootstrap support for H2Y130 as seed ortholog is 100%.
Bootstrap support for H3H4C8 as seed ortholog is 100%.

Group of orthologs #411. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 P.ramorum:416

F6YHN3              	100.00%		H3GA73              	100.00%
Bootstrap support for F6YHN3 as seed ortholog is 100%.
Bootstrap support for H3GA73 as seed ortholog is 100%.

Group of orthologs #412. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 P.ramorum:244

F6ZUU0              	100.00%		H3G5E4              	100.00%
                    	       		H3G6J2              	100.00%
Bootstrap support for F6ZUU0 as seed ortholog is 100%.
Bootstrap support for H3G5E4 as seed ortholog is 100%.
Bootstrap support for H3G6J2 as seed ortholog is 99%.

Group of orthologs #413. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 P.ramorum:414

F6ZN98              	100.00%		H3GTV1              	100.00%
Bootstrap support for F6ZN98 as seed ortholog is 100%.
Bootstrap support for H3GTV1 as seed ortholog is 100%.

Group of orthologs #414. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 P.ramorum:414

H2XV68              	100.00%		H3GU31              	100.00%
Bootstrap support for H2XV68 as seed ortholog is 100%.
Bootstrap support for H3GU31 as seed ortholog is 100%.

Group of orthologs #415. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 P.ramorum:413

F6WS10              	100.00%		H3GG62              	100.00%
F6XNT2              	20.66%		
F6S8P8              	9.80%		
Bootstrap support for F6WS10 as seed ortholog is 100%.
Bootstrap support for H3GG62 as seed ortholog is 100%.

Group of orthologs #416. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.ramorum:30

H2XX53              	100.00%		H3G633              	100.00%
                    	       		H3G675              	51.52%
Bootstrap support for H2XX53 as seed ortholog is 100%.
Bootstrap support for H3G633 as seed ortholog is 78%.

Group of orthologs #417. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 P.ramorum:413

F6YGJ7              	100.00%		H3GQ19              	100.00%
Bootstrap support for F6YGJ7 as seed ortholog is 100%.
Bootstrap support for H3GQ19 as seed ortholog is 100%.

Group of orthologs #418. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 P.ramorum:195

F6RNS7              	100.00%		H3GA44              	100.00%
Bootstrap support for F6RNS7 as seed ortholog is 100%.
Bootstrap support for H3GA44 as seed ortholog is 100%.

Group of orthologs #419. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 P.ramorum:168

F6UIE4              	100.00%		H3G8V8              	100.00%
Bootstrap support for F6UIE4 as seed ortholog is 100%.
Bootstrap support for H3G8V8 as seed ortholog is 99%.

Group of orthologs #420. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 P.ramorum:410

F6VMS4              	100.00%		H3GQQ0              	100.00%
                    	       		H3G794              	7.24%
Bootstrap support for F6VMS4 as seed ortholog is 100%.
Bootstrap support for H3GQQ0 as seed ortholog is 100%.

Group of orthologs #421. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.ramorum:195

F6PJ70              	100.00%		H3GWC2              	100.00%
Bootstrap support for F6PJ70 as seed ortholog is 96%.
Bootstrap support for H3GWC2 as seed ortholog is 98%.

Group of orthologs #422. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 P.ramorum:183

F6S4Q0              	100.00%		H3G8E1              	100.00%
Bootstrap support for F6S4Q0 as seed ortholog is 100%.
Bootstrap support for H3G8E1 as seed ortholog is 100%.

Group of orthologs #423. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 P.ramorum:408

F6Z3S5              	100.00%		H3G865              	100.00%
Bootstrap support for F6Z3S5 as seed ortholog is 100%.
Bootstrap support for H3G865 as seed ortholog is 100%.

Group of orthologs #424. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 P.ramorum:365

H2Y1I4              	100.00%		H3G9P3              	100.00%
Bootstrap support for H2Y1I4 as seed ortholog is 100%.
Bootstrap support for H3G9P3 as seed ortholog is 100%.

Group of orthologs #425. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.ramorum:266

H2XS68              	100.00%		H3G8S2              	100.00%
H2XK79              	81.48%		
Bootstrap support for H2XS68 as seed ortholog is 99%.
Bootstrap support for H3G8S2 as seed ortholog is 100%.

Group of orthologs #426. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 P.ramorum:407

H2Y1W6              	100.00%		H3GJD1              	100.00%
Bootstrap support for H2Y1W6 as seed ortholog is 100%.
Bootstrap support for H3GJD1 as seed ortholog is 100%.

Group of orthologs #427. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 P.ramorum:406

F6RCY1              	100.00%		H3G762              	100.00%
Bootstrap support for F6RCY1 as seed ortholog is 100%.
Bootstrap support for H3G762 as seed ortholog is 100%.

Group of orthologs #428. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.ramorum:148

F6TI28              	100.00%		H3G9R4              	100.00%
Bootstrap support for F6TI28 as seed ortholog is 100%.
Bootstrap support for H3G9R4 as seed ortholog is 100%.

Group of orthologs #429. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 P.ramorum:406

F6YX67              	100.00%		H3GHW1              	100.00%
Bootstrap support for F6YX67 as seed ortholog is 100%.
Bootstrap support for H3GHW1 as seed ortholog is 100%.

Group of orthologs #430. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 P.ramorum:405

F6SGI6              	100.00%		H3G7S8              	100.00%
Bootstrap support for F6SGI6 as seed ortholog is 100%.
Bootstrap support for H3G7S8 as seed ortholog is 100%.

Group of orthologs #431. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 P.ramorum:215

F6VR09              	100.00%		H3G712              	100.00%
Bootstrap support for F6VR09 as seed ortholog is 100%.
Bootstrap support for H3G712 as seed ortholog is 100%.

Group of orthologs #432. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 P.ramorum:335

F6W8G0              	100.00%		H3GUK7              	100.00%
Bootstrap support for F6W8G0 as seed ortholog is 100%.
Bootstrap support for H3GUK7 as seed ortholog is 100%.

Group of orthologs #433. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 P.ramorum:404

F6SIX8              	100.00%		H3HCZ8              	100.00%
Bootstrap support for F6SIX8 as seed ortholog is 100%.
Bootstrap support for H3HCZ8 as seed ortholog is 100%.

Group of orthologs #434. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 P.ramorum:263

F6Z9I2              	100.00%		H3GAI2              	100.00%
                    	       		H3G9B2              	37.42%
Bootstrap support for F6Z9I2 as seed ortholog is 100%.
Bootstrap support for H3GAI2 as seed ortholog is 100%.

Group of orthologs #435. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 P.ramorum:401

F6PX61              	100.00%		H3HAP6              	100.00%
                    	       		H3G4X5              	67.02%
Bootstrap support for F6PX61 as seed ortholog is 100%.
Bootstrap support for H3HAP6 as seed ortholog is 100%.

Group of orthologs #436. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 P.ramorum:401

F7AD97              	100.00%		H3GS73              	100.00%
Bootstrap support for F7AD97 as seed ortholog is 100%.
Bootstrap support for H3GS73 as seed ortholog is 100%.

Group of orthologs #437. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 P.ramorum:343

F6TBI8              	100.00%		H3G8B8              	100.00%
Bootstrap support for F6TBI8 as seed ortholog is 100%.
Bootstrap support for H3G8B8 as seed ortholog is 100%.

Group of orthologs #438. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 P.ramorum:271

F6TX56              	100.00%		H3G8R2              	100.00%
Bootstrap support for F6TX56 as seed ortholog is 100%.
Bootstrap support for H3G8R2 as seed ortholog is 100%.

Group of orthologs #439. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 P.ramorum:336

F7B1X4              	100.00%		H3GL68              	100.00%
Bootstrap support for F7B1X4 as seed ortholog is 100%.
Bootstrap support for H3GL68 as seed ortholog is 100%.

Group of orthologs #440. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 P.ramorum:400

H2Y164              	100.00%		H3GJS1              	100.00%
Bootstrap support for H2Y164 as seed ortholog is 100%.
Bootstrap support for H3GJS1 as seed ortholog is 100%.

Group of orthologs #441. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.ramorum:399

F6WDL0              	100.00%		H3G7Y5              	100.00%
Bootstrap support for F6WDL0 as seed ortholog is 79%.
Bootstrap support for H3G7Y5 as seed ortholog is 100%.

Group of orthologs #442. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 P.ramorum:58

F6WRF3              	100.00%		H3H3X5              	100.00%
Bootstrap support for F6WRF3 as seed ortholog is 100%.
Bootstrap support for H3H3X5 as seed ortholog is 93%.

Group of orthologs #443. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 P.ramorum:193

F6Z781              	100.00%		H3GAL8              	100.00%
                    	       		H3G6U6              	53.64%
Bootstrap support for F6Z781 as seed ortholog is 100%.
Bootstrap support for H3GAL8 as seed ortholog is 99%.

Group of orthologs #444. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 P.ramorum:398

F6UJ45              	100.00%		H3G857              	100.00%
Bootstrap support for F6UJ45 as seed ortholog is 100%.
Bootstrap support for H3G857 as seed ortholog is 100%.

Group of orthologs #445. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 P.ramorum:50

H2Y2K5              	100.00%		H3G6G9              	100.00%
F6VXL3              	27.34%		
Bootstrap support for H2Y2K5 as seed ortholog is 100%.
Bootstrap support for H3G6G9 as seed ortholog is 89%.

Group of orthologs #446. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 P.ramorum:253

F7B7G6              	100.00%		H3GBC9              	100.00%
Bootstrap support for F7B7G6 as seed ortholog is 100%.
Bootstrap support for H3GBC9 as seed ortholog is 100%.

Group of orthologs #447. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 P.ramorum:396

F6ZGD4              	100.00%		H3GBZ0              	100.00%
Bootstrap support for F6ZGD4 as seed ortholog is 100%.
Bootstrap support for H3GBZ0 as seed ortholog is 100%.

Group of orthologs #448. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 P.ramorum:395

F6TQ69              	100.00%		H3GLQ1              	100.00%
Bootstrap support for F6TQ69 as seed ortholog is 100%.
Bootstrap support for H3GLQ1 as seed ortholog is 100%.

Group of orthologs #449. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 P.ramorum:394

F6VUM2              	100.00%		H3GAH2              	100.00%
                    	       		H3GAH1              	93.16%
Bootstrap support for F6VUM2 as seed ortholog is 100%.
Bootstrap support for H3GAH2 as seed ortholog is 100%.

Group of orthologs #450. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 P.ramorum:394

F6YGJ1              	100.00%		H3G8E0              	100.00%
Bootstrap support for F6YGJ1 as seed ortholog is 100%.
Bootstrap support for H3G8E0 as seed ortholog is 100%.

Group of orthologs #451. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 P.ramorum:306

F6QI83              	100.00%		H3GAS1              	100.00%
Bootstrap support for F6QI83 as seed ortholog is 100%.
Bootstrap support for H3GAS1 as seed ortholog is 100%.

Group of orthologs #452. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 P.ramorum:393

F7AFG0              	100.00%		H3H1K7              	100.00%
Bootstrap support for F7AFG0 as seed ortholog is 100%.
Bootstrap support for H3H1K7 as seed ortholog is 100%.

Group of orthologs #453. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 P.ramorum:134

F6PKL5              	100.00%		H3GA03              	100.00%
Bootstrap support for F6PKL5 as seed ortholog is 100%.
Bootstrap support for H3GA03 as seed ortholog is 99%.

Group of orthologs #454. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 P.ramorum:391

F6XRI7              	100.00%		H3G7Z2              	100.00%
Bootstrap support for F6XRI7 as seed ortholog is 100%.
Bootstrap support for H3G7Z2 as seed ortholog is 100%.

Group of orthologs #455. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 P.ramorum:337

F7BLS5              	100.00%		H3G9X4              	100.00%
Bootstrap support for F7BLS5 as seed ortholog is 100%.
Bootstrap support for H3G9X4 as seed ortholog is 100%.

Group of orthologs #456. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 P.ramorum:241

F6XBC5              	100.00%		H3G4X2              	100.00%
Bootstrap support for F6XBC5 as seed ortholog is 100%.
Bootstrap support for H3G4X2 as seed ortholog is 100%.

Group of orthologs #457. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 P.ramorum:389

F7B593              	100.00%		H3GGA7              	100.00%
Bootstrap support for F7B593 as seed ortholog is 100%.
Bootstrap support for H3GGA7 as seed ortholog is 100%.

Group of orthologs #458. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 P.ramorum:389

H2XRF8              	100.00%		H3H320              	100.00%
Bootstrap support for H2XRF8 as seed ortholog is 100%.
Bootstrap support for H3H320 as seed ortholog is 100%.

Group of orthologs #459. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 P.ramorum:262

H2XYE1              	100.00%		H3G5K2              	100.00%
Bootstrap support for H2XYE1 as seed ortholog is 100%.
Bootstrap support for H3G5K2 as seed ortholog is 100%.

Group of orthologs #460. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 P.ramorum:387

F6SID0              	100.00%		H3G7Y3              	100.00%
Bootstrap support for F6SID0 as seed ortholog is 100%.
Bootstrap support for H3G7Y3 as seed ortholog is 100%.

Group of orthologs #461. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 P.ramorum:387

F6TGX2              	100.00%		H3GWU9              	100.00%
Bootstrap support for F6TGX2 as seed ortholog is 100%.
Bootstrap support for H3GWU9 as seed ortholog is 100%.

Group of orthologs #462. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 P.ramorum:387

Q1RLD5              	100.00%		H3G9I3              	100.00%
Bootstrap support for Q1RLD5 as seed ortholog is 100%.
Bootstrap support for H3G9I3 as seed ortholog is 100%.

Group of orthologs #463. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 P.ramorum:386

F6RBT7              	100.00%		H3GT71              	100.00%
Bootstrap support for F6RBT7 as seed ortholog is 100%.
Bootstrap support for H3GT71 as seed ortholog is 100%.

Group of orthologs #464. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 P.ramorum:220

F7AXN3              	100.00%		H3GG09              	100.00%
Bootstrap support for F7AXN3 as seed ortholog is 99%.
Bootstrap support for H3GG09 as seed ortholog is 99%.

Group of orthologs #465. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 P.ramorum:386

H2XWE4              	100.00%		H3G949              	100.00%
Bootstrap support for H2XWE4 as seed ortholog is 100%.
Bootstrap support for H3G949 as seed ortholog is 100%.

Group of orthologs #466. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 P.ramorum:386

H2Y2G1              	100.00%		H3G9L7              	100.00%
Bootstrap support for H2Y2G1 as seed ortholog is 100%.
Bootstrap support for H3G9L7 as seed ortholog is 100%.

Group of orthologs #467. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 P.ramorum:94

F6XI84              	100.00%		H3GEF1              	100.00%
Bootstrap support for F6XI84 as seed ortholog is 100%.
Bootstrap support for H3GEF1 as seed ortholog is 95%.

Group of orthologs #468. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 P.ramorum:384

F6R8V3              	100.00%		H3GEW8              	100.00%
Bootstrap support for F6R8V3 as seed ortholog is 100%.
Bootstrap support for H3GEW8 as seed ortholog is 100%.

Group of orthologs #469. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 P.ramorum:383

F7ASN6              	100.00%		H3G8N9              	100.00%
Bootstrap support for F7ASN6 as seed ortholog is 100%.
Bootstrap support for H3G8N9 as seed ortholog is 100%.

Group of orthologs #470. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 P.ramorum:28

F6UI47              	100.00%		H3H2B2              	100.00%
                    	       		H3GAQ9              	99.50%
                    	       		H3H2B4              	98.83%
                    	       		H3GAP1              	72.95%
                    	       		H3GAQ6              	70.45%
                    	       		H3G6W1              	15.86%
Bootstrap support for F6UI47 as seed ortholog is 100%.
Bootstrap support for H3H2B2 as seed ortholog is 75%.

Group of orthologs #471. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 P.ramorum:381

H2XWR9              	100.00%		H3G888              	100.00%
                    	       		H3GCH7              	66.38%
                    	       		H3GCH8              	26.45%
Bootstrap support for H2XWR9 as seed ortholog is 100%.
Bootstrap support for H3G888 as seed ortholog is 100%.

Group of orthologs #472. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 P.ramorum:381

F6U7Z2              	100.00%		H3G503              	100.00%
Bootstrap support for F6U7Z2 as seed ortholog is 100%.
Bootstrap support for H3G503 as seed ortholog is 100%.

Group of orthologs #473. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:302

F7AW67              	100.00%		H3G9J9              	100.00%
Bootstrap support for F7AW67 as seed ortholog is 97%.
Bootstrap support for H3G9J9 as seed ortholog is 100%.

Group of orthologs #474. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:57

F6UJS3              	100.00%		H3GW83              	100.00%
Bootstrap support for F6UJS3 as seed ortholog is 99%.
Bootstrap support for H3GW83 as seed ortholog is 86%.

Group of orthologs #475. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 P.ramorum:250

H2XL44              	100.00%		H3GIT1              	100.00%
Bootstrap support for H2XL44 as seed ortholog is 100%.
Bootstrap support for H3GIT1 as seed ortholog is 100%.

Group of orthologs #476. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.ramorum:217

H2XYY6              	100.00%		H3G758              	100.00%
Bootstrap support for H2XYY6 as seed ortholog is 87%.
Bootstrap support for H3G758 as seed ortholog is 99%.

Group of orthologs #477. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 P.ramorum:177

H2XUE4              	100.00%		H3G8W8              	100.00%
Bootstrap support for H2XUE4 as seed ortholog is 100%.
Bootstrap support for H3G8W8 as seed ortholog is 99%.

Group of orthologs #478. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 P.ramorum:380

F6ZZJ8              	100.00%		H3H0X1              	100.00%
Bootstrap support for F6ZZJ8 as seed ortholog is 100%.
Bootstrap support for H3H0X1 as seed ortholog is 100%.

Group of orthologs #479. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 P.ramorum:379

F6SZY0              	100.00%		H3GLH2              	100.00%
Bootstrap support for F6SZY0 as seed ortholog is 100%.
Bootstrap support for H3GLH2 as seed ortholog is 100%.

Group of orthologs #480. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.ramorum:117

H2Y2S2              	100.00%		H3GCU1              	100.00%
Bootstrap support for H2Y2S2 as seed ortholog is 99%.
Bootstrap support for H3GCU1 as seed ortholog is 99%.

Group of orthologs #481. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 P.ramorum:294

F6SYF4              	100.00%		H3GBK8              	100.00%
Bootstrap support for F6SYF4 as seed ortholog is 100%.
Bootstrap support for H3GBK8 as seed ortholog is 100%.

Group of orthologs #482. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 P.ramorum:378

F6XUX1              	100.00%		H3G9V7              	100.00%
Bootstrap support for F6XUX1 as seed ortholog is 100%.
Bootstrap support for H3G9V7 as seed ortholog is 100%.

Group of orthologs #483. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 P.ramorum:307

H2XLI2              	100.00%		H3H2U3              	100.00%
Bootstrap support for H2XLI2 as seed ortholog is 100%.
Bootstrap support for H3H2U3 as seed ortholog is 100%.

Group of orthologs #484. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 P.ramorum:161

F6X4N7              	100.00%		H3GA00              	100.00%
Bootstrap support for F6X4N7 as seed ortholog is 100%.
Bootstrap support for H3GA00 as seed ortholog is 99%.

Group of orthologs #485. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 P.ramorum:102

F6WXC5              	100.00%		H3GZT4              	100.00%
Bootstrap support for F6WXC5 as seed ortholog is 100%.
Bootstrap support for H3GZT4 as seed ortholog is 99%.

Group of orthologs #486. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.ramorum:147

F6WPA1              	100.00%		H3GF97              	100.00%
H2XNZ6              	33.40%		H3GF95              	63.15%
                    	       		H3GF55              	33.61%
                    	       		H3GIT9              	21.85%
Bootstrap support for F6WPA1 as seed ortholog is 96%.
Bootstrap support for H3GF97 as seed ortholog is 99%.

Group of orthologs #487. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 P.ramorum:104

F6TAR1              	100.00%		H3GDL0              	100.00%
                    	       		H3G8B9              	50.23%
                    	       		H3G8B7              	41.16%
Bootstrap support for F6TAR1 as seed ortholog is 100%.
Bootstrap support for H3GDL0 as seed ortholog is 97%.

Group of orthologs #488. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 P.ramorum:290

F6UZS7              	100.00%		H3GAJ0              	100.00%
Bootstrap support for F6UZS7 as seed ortholog is 100%.
Bootstrap support for H3GAJ0 as seed ortholog is 100%.

Group of orthologs #489. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 P.ramorum:376

F6PZR6              	100.00%		H3GWU2              	100.00%
Bootstrap support for F6PZR6 as seed ortholog is 100%.
Bootstrap support for H3GWU2 as seed ortholog is 100%.

Group of orthologs #490. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 P.ramorum:376

F6W790              	100.00%		H3HDG8              	100.00%
Bootstrap support for F6W790 as seed ortholog is 100%.
Bootstrap support for H3HDG8 as seed ortholog is 100%.

Group of orthologs #491. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 P.ramorum:374

F6XMM6              	100.00%		H3G883              	100.00%
Bootstrap support for F6XMM6 as seed ortholog is 100%.
Bootstrap support for H3G883 as seed ortholog is 100%.

Group of orthologs #492. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 P.ramorum:374

F7AVN1              	100.00%		H3G9W9              	100.00%
Bootstrap support for F7AVN1 as seed ortholog is 100%.
Bootstrap support for H3G9W9 as seed ortholog is 100%.

Group of orthologs #493. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 P.ramorum:374

F7A8L3              	100.00%		H3GE11              	100.00%
Bootstrap support for F7A8L3 as seed ortholog is 100%.
Bootstrap support for H3GE11 as seed ortholog is 100%.

Group of orthologs #494. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 P.ramorum:374

F6V136              	100.00%		H3GUH2              	100.00%
Bootstrap support for F6V136 as seed ortholog is 100%.
Bootstrap support for H3GUH2 as seed ortholog is 100%.

Group of orthologs #495. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 P.ramorum:373

F6RXZ8              	100.00%		H3G783              	100.00%
Bootstrap support for F6RXZ8 as seed ortholog is 100%.
Bootstrap support for H3G783 as seed ortholog is 100%.

Group of orthologs #496. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 P.ramorum:373

F6ZVE7              	100.00%		H3G836              	100.00%
Bootstrap support for F6ZVE7 as seed ortholog is 100%.
Bootstrap support for H3G836 as seed ortholog is 100%.

Group of orthologs #497. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.ramorum:127

H2XZZ6              	100.00%		H3G7Z1              	100.00%
Bootstrap support for H2XZZ6 as seed ortholog is 99%.
Bootstrap support for H3G7Z1 as seed ortholog is 99%.

Group of orthologs #498. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 P.ramorum:373

H2Y0R2              	100.00%		H3G8T3              	100.00%
Bootstrap support for H2Y0R2 as seed ortholog is 100%.
Bootstrap support for H3G8T3 as seed ortholog is 100%.

Group of orthologs #499. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 P.ramorum:372

F6PKD1              	100.00%		H3GJ62              	100.00%
                    	       		H3GJ63              	84.70%
Bootstrap support for F6PKD1 as seed ortholog is 100%.
Bootstrap support for H3GJ62 as seed ortholog is 100%.

Group of orthologs #500. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 P.ramorum:372

F6UGN5              	100.00%		H3G6P3              	100.00%
Bootstrap support for F6UGN5 as seed ortholog is 100%.
Bootstrap support for H3G6P3 as seed ortholog is 100%.

Group of orthologs #501. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 P.ramorum:117

F7AA01              	100.00%		H3GW34              	100.00%
H2XJY8              	16.28%		H3GW35              	95.88%
                    	       		H3G7N0              	72.94%
                    	       		H3G7I4              	46.57%
                    	       		H3GW37              	33.65%
                    	       		H3G7I6              	28.30%
Bootstrap support for F7AA01 as seed ortholog is 100%.
Bootstrap support for H3GW34 as seed ortholog is 99%.

Group of orthologs #502. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.ramorum:55

Q4H3L5              	100.00%		H3GG23              	100.00%
                    	       		B9VTN8              	12.19%
Bootstrap support for Q4H3L5 as seed ortholog is 99%.
Bootstrap support for H3GG23 as seed ortholog is 94%.

Group of orthologs #503. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 P.ramorum:370

F6WAW7              	100.00%		H3GAJ2              	100.00%
Bootstrap support for F6WAW7 as seed ortholog is 100%.
Bootstrap support for H3GAJ2 as seed ortholog is 100%.

Group of orthologs #504. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 P.ramorum:370

F6SFQ0              	100.00%		H3GQ20              	100.00%
Bootstrap support for F6SFQ0 as seed ortholog is 100%.
Bootstrap support for H3GQ20 as seed ortholog is 100%.

Group of orthologs #505. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 P.ramorum:215

F6S902              	100.00%		H3HCI0              	100.00%
Bootstrap support for F6S902 as seed ortholog is 100%.
Bootstrap support for H3HCI0 as seed ortholog is 99%.

Group of orthologs #506. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.ramorum:92

F7ARV5              	100.00%		H3G8Q7              	100.00%
Bootstrap support for F7ARV5 as seed ortholog is 99%.
Bootstrap support for H3G8Q7 as seed ortholog is 99%.

Group of orthologs #507. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 P.ramorum:369

F6XP34              	100.00%		H3GPE0              	100.00%
Bootstrap support for F6XP34 as seed ortholog is 100%.
Bootstrap support for H3GPE0 as seed ortholog is 100%.

Group of orthologs #508. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 P.ramorum:369

F6WUM1              	100.00%		H3HCS0              	100.00%
Bootstrap support for F6WUM1 as seed ortholog is 100%.
Bootstrap support for H3HCS0 as seed ortholog is 100%.

Group of orthologs #509. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 P.ramorum:368

H2Y1I5              	100.00%		H3GLA1              	100.00%
                    	       		H3GL97              	66.67%
Bootstrap support for H2Y1I5 as seed ortholog is 100%.
Bootstrap support for H3GLA1 as seed ortholog is 100%.

Group of orthologs #510. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.ramorum:368

F6PGY3              	100.00%		H3G9R5              	100.00%
Bootstrap support for F6PGY3 as seed ortholog is 93%.
Bootstrap support for H3G9R5 as seed ortholog is 100%.

Group of orthologs #511. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.ramorum:84

F6T7R0              	100.00%		H3G608              	100.00%
Bootstrap support for F6T7R0 as seed ortholog is 97%.
Bootstrap support for H3G608 as seed ortholog is 99%.

Group of orthologs #512. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 P.ramorum:368

F6SAH8              	100.00%		H3GBQ6              	100.00%
Bootstrap support for F6SAH8 as seed ortholog is 100%.
Bootstrap support for H3GBQ6 as seed ortholog is 100%.

Group of orthologs #513. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 P.ramorum:197

F6WXJ5              	100.00%		H3G667              	100.00%
Bootstrap support for F6WXJ5 as seed ortholog is 100%.
Bootstrap support for H3G667 as seed ortholog is 100%.

Group of orthologs #514. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.ramorum:368

F6YKJ2              	100.00%		H3G7G1              	100.00%
Bootstrap support for F6YKJ2 as seed ortholog is 99%.
Bootstrap support for H3G7G1 as seed ortholog is 100%.

Group of orthologs #515. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 P.ramorum:368

F6UHC9              	100.00%		H3H301              	100.00%
Bootstrap support for F6UHC9 as seed ortholog is 100%.
Bootstrap support for H3H301 as seed ortholog is 100%.

Group of orthologs #516. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 P.ramorum:61

F6XKA2              	100.00%		H3HAP2              	100.00%
Bootstrap support for F6XKA2 as seed ortholog is 100%.
Bootstrap support for H3HAP2 as seed ortholog is 85%.

Group of orthologs #517. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 P.ramorum:367

F7B5A5              	100.00%		H3GC35              	100.00%
                    	       		H3H1M2              	43.47%
Bootstrap support for F7B5A5 as seed ortholog is 100%.
Bootstrap support for H3GC35 as seed ortholog is 100%.

Group of orthologs #518. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 P.ramorum:366

F6WLN1              	100.00%		H3G5W3              	100.00%
Bootstrap support for F6WLN1 as seed ortholog is 100%.
Bootstrap support for H3G5W3 as seed ortholog is 100%.

Group of orthologs #519. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 P.ramorum:366

F6VFC5              	100.00%		H3HCN8              	100.00%
Bootstrap support for F6VFC5 as seed ortholog is 100%.
Bootstrap support for H3HCN8 as seed ortholog is 100%.

Group of orthologs #520. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 P.ramorum:247

H2XYJ2              	100.00%		H3G7T8              	100.00%
Bootstrap support for H2XYJ2 as seed ortholog is 100%.
Bootstrap support for H3G7T8 as seed ortholog is 100%.

Group of orthologs #521. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 P.ramorum:364

F6UTT2              	100.00%		H3G8H2              	100.00%
F6QEE6              	100.00%		H3GIL6              	100.00%
F6RCR0              	42.39%		
Bootstrap support for F6UTT2 as seed ortholog is 100%.
Bootstrap support for F6QEE6 as seed ortholog is 100%.
Bootstrap support for H3G8H2 as seed ortholog is 100%.
Bootstrap support for H3GIL6 as seed ortholog is 100%.

Group of orthologs #522. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 P.ramorum:364

F6QF37              	100.00%		H3GV61              	100.00%
                    	       		H3G7E1              	60.03%
Bootstrap support for F6QF37 as seed ortholog is 100%.
Bootstrap support for H3GV61 as seed ortholog is 100%.

Group of orthologs #523. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 P.ramorum:364

F6WRC9              	100.00%		H3GYW6              	100.00%
                    	       		H3GYV5              	22.43%
Bootstrap support for F6WRC9 as seed ortholog is 100%.
Bootstrap support for H3GYW6 as seed ortholog is 100%.

Group of orthologs #524. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 P.ramorum:364

F6SQQ1              	100.00%		H3G8Q6              	100.00%
Bootstrap support for F6SQQ1 as seed ortholog is 100%.
Bootstrap support for H3G8Q6 as seed ortholog is 100%.

Group of orthologs #525. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 P.ramorum:308

F7B0I1              	100.00%		H3G7P3              	100.00%
Bootstrap support for F7B0I1 as seed ortholog is 100%.
Bootstrap support for H3G7P3 as seed ortholog is 100%.

Group of orthologs #526. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 P.ramorum:364

H2XNB1              	100.00%		H3G5Q1              	100.00%
Bootstrap support for H2XNB1 as seed ortholog is 100%.
Bootstrap support for H3G5Q1 as seed ortholog is 100%.

Group of orthologs #527. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 P.ramorum:97

F7B7E9              	100.00%		H3GD15              	100.00%
Bootstrap support for F7B7E9 as seed ortholog is 100%.
Bootstrap support for H3GD15 as seed ortholog is 98%.

Group of orthologs #528. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 P.ramorum:364

F6U8C7              	100.00%		H3HC45              	100.00%
Bootstrap support for F6U8C7 as seed ortholog is 100%.
Bootstrap support for H3HC45 as seed ortholog is 100%.

Group of orthologs #529. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.ramorum:363

F6RF92              	100.00%		H3GEG8              	100.00%
Bootstrap support for F6RF92 as seed ortholog is 99%.
Bootstrap support for H3GEG8 as seed ortholog is 100%.

Group of orthologs #530. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 P.ramorum:363

F6UDJ0              	100.00%		H3GCA3              	100.00%
Bootstrap support for F6UDJ0 as seed ortholog is 100%.
Bootstrap support for H3GCA3 as seed ortholog is 100%.

Group of orthologs #531. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.ramorum:363

H2XT24              	100.00%		H3G894              	100.00%
Bootstrap support for H2XT24 as seed ortholog is 100%.
Bootstrap support for H3G894 as seed ortholog is 100%.

Group of orthologs #532. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.ramorum:277

F6ZM65              	100.00%		H3GNZ8              	100.00%
Bootstrap support for F6ZM65 as seed ortholog is 100%.
Bootstrap support for H3GNZ8 as seed ortholog is 100%.

Group of orthologs #533. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 P.ramorum:363

F6RJV3              	100.00%		H3HBC2              	100.00%
Bootstrap support for F6RJV3 as seed ortholog is 100%.
Bootstrap support for H3HBC2 as seed ortholog is 100%.

Group of orthologs #534. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.ramorum:363

F6WIL6              	100.00%		H3HB77              	100.00%
Bootstrap support for F6WIL6 as seed ortholog is 99%.
Bootstrap support for H3HB77 as seed ortholog is 100%.

Group of orthologs #535. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.ramorum:362

F7B0A7              	100.00%		H3G8J3              	100.00%
F7BH30              	31.32%		
Bootstrap support for F7B0A7 as seed ortholog is 99%.
Bootstrap support for H3G8J3 as seed ortholog is 100%.

Group of orthologs #536. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 P.ramorum:362

F6ZA35              	100.00%		H3G7S4              	100.00%
Bootstrap support for F6ZA35 as seed ortholog is 100%.
Bootstrap support for H3G7S4 as seed ortholog is 100%.

Group of orthologs #537. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 P.ramorum:362

F7AZV0              	100.00%		H3G6Y6              	100.00%
Bootstrap support for F7AZV0 as seed ortholog is 99%.
Bootstrap support for H3G6Y6 as seed ortholog is 100%.

Group of orthologs #538. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 P.ramorum:106

F6U2S1              	100.00%		H3GEF2              	100.00%
H2XQ28              	8.80%		
Bootstrap support for F6U2S1 as seed ortholog is 100%.
Bootstrap support for H3GEF2 as seed ortholog is 94%.

Group of orthologs #539. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 P.ramorum:361

F6TDZ5              	100.00%		H3G7L2              	100.00%
Bootstrap support for F6TDZ5 as seed ortholog is 99%.
Bootstrap support for H3G7L2 as seed ortholog is 100%.

Group of orthologs #540. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.ramorum:179

F6S0X0              	100.00%		H3GMA5              	100.00%
Bootstrap support for F6S0X0 as seed ortholog is 99%.
Bootstrap support for H3GMA5 as seed ortholog is 100%.

Group of orthologs #541. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.ramorum:85

F7A0P0              	100.00%		H3GAB6              	100.00%
Bootstrap support for F7A0P0 as seed ortholog is 100%.
Bootstrap support for H3GAB6 as seed ortholog is 99%.

Group of orthologs #542. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 P.ramorum:244

H2XLM6              	100.00%		H3GZ78              	100.00%
Bootstrap support for H2XLM6 as seed ortholog is 100%.
Bootstrap support for H3GZ78 as seed ortholog is 100%.

Group of orthologs #543. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 P.ramorum:360

H2XSN3              	100.00%		H3GAK1              	100.00%
Bootstrap support for H2XSN3 as seed ortholog is 100%.
Bootstrap support for H3GAK1 as seed ortholog is 100%.

Group of orthologs #544. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 P.ramorum:358

F6T0X5              	100.00%		H3GA39              	100.00%
Bootstrap support for F6T0X5 as seed ortholog is 100%.
Bootstrap support for H3GA39 as seed ortholog is 100%.

Group of orthologs #545. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 P.ramorum:219

F6XIZ4              	100.00%		H3G8U4              	100.00%
Bootstrap support for F6XIZ4 as seed ortholog is 100%.
Bootstrap support for H3G8U4 as seed ortholog is 100%.

Group of orthologs #546. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 P.ramorum:358

H2Y3P6              	100.00%		H3GU32              	100.00%
Bootstrap support for H2Y3P6 as seed ortholog is 100%.
Bootstrap support for H3GU32 as seed ortholog is 100%.

Group of orthologs #547. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 P.ramorum:310

F7BQ53              	100.00%		H3GA67              	100.00%
Bootstrap support for F7BQ53 as seed ortholog is 100%.
Bootstrap support for H3GA67 as seed ortholog is 100%.

Group of orthologs #548. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 P.ramorum:356

F6Q096              	100.00%		H3G973              	100.00%
Bootstrap support for F6Q096 as seed ortholog is 100%.
Bootstrap support for H3G973 as seed ortholog is 100%.

Group of orthologs #549. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 P.ramorum:356

H2XWZ3              	100.00%		H3GC19              	100.00%
Bootstrap support for H2XWZ3 as seed ortholog is 100%.
Bootstrap support for H3GC19 as seed ortholog is 100%.

Group of orthologs #550. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 P.ramorum:356

F6TLX8              	100.00%		H3HCQ5              	100.00%
Bootstrap support for F6TLX8 as seed ortholog is 100%.
Bootstrap support for H3HCQ5 as seed ortholog is 100%.

Group of orthologs #551. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 P.ramorum:270

L7N0S3              	100.00%		H3H2A5              	100.00%
Bootstrap support for L7N0S3 as seed ortholog is 100%.
Bootstrap support for H3H2A5 as seed ortholog is 100%.

Group of orthologs #552. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 P.ramorum:354

F6RNR5              	100.00%		H3GBN6              	100.00%
Bootstrap support for F6RNR5 as seed ortholog is 100%.
Bootstrap support for H3GBN6 as seed ortholog is 100%.

Group of orthologs #553. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 P.ramorum:354

F6SCN2              	100.00%		H3GAF9              	100.00%
Bootstrap support for F6SCN2 as seed ortholog is 100%.
Bootstrap support for H3GAF9 as seed ortholog is 100%.

Group of orthologs #554. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 P.ramorum:354

H2Y2X7              	100.00%		H3HBS2              	100.00%
Bootstrap support for H2Y2X7 as seed ortholog is 100%.
Bootstrap support for H3HBS2 as seed ortholog is 100%.

Group of orthologs #555. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 P.ramorum:353

F6SWH7              	100.00%		H3GIG8              	100.00%
Bootstrap support for F6SWH7 as seed ortholog is 100%.
Bootstrap support for H3GIG8 as seed ortholog is 100%.

Group of orthologs #556. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 P.ramorum:353

F6WN68              	100.00%		H3HD76              	100.00%
Bootstrap support for F6WN68 as seed ortholog is 100%.
Bootstrap support for H3HD76 as seed ortholog is 100%.

Group of orthologs #557. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 P.ramorum:352

F6SWW8              	100.00%		H3GQU1              	100.00%
F6YSD1              	50.91%		H3H607              	73.25%
F6WM93              	30.78%		
F6WLM3              	27.36%		
F6RFT0              	24.35%		
F6VS92              	24.14%		
H2XN22              	14.59%		
Bootstrap support for F6SWW8 as seed ortholog is 100%.
Bootstrap support for H3GQU1 as seed ortholog is 100%.

Group of orthologs #558. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 P.ramorum:352

F6UA87              	100.00%		H3GAQ0              	100.00%
Bootstrap support for F6UA87 as seed ortholog is 100%.
Bootstrap support for H3GAQ0 as seed ortholog is 100%.

Group of orthologs #559. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 P.ramorum:352

H2XQR7              	100.00%		H3G8I5              	100.00%
Bootstrap support for H2XQR7 as seed ortholog is 100%.
Bootstrap support for H3G8I5 as seed ortholog is 100%.

Group of orthologs #560. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 P.ramorum:352

H2XL83              	100.00%		H3GMC4              	100.00%
Bootstrap support for H2XL83 as seed ortholog is 100%.
Bootstrap support for H3GMC4 as seed ortholog is 100%.

Group of orthologs #561. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.ramorum:351

F6VZQ1              	100.00%		H3GAJ1              	100.00%
Bootstrap support for F6VZQ1 as seed ortholog is 99%.
Bootstrap support for H3GAJ1 as seed ortholog is 100%.

Group of orthologs #562. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 P.ramorum:351

H2XR08              	100.00%		H3G9H9              	100.00%
Bootstrap support for H2XR08 as seed ortholog is 100%.
Bootstrap support for H3G9H9 as seed ortholog is 100%.

Group of orthologs #563. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.ramorum:214

F6XTY4              	100.00%		H3G791              	100.00%
Bootstrap support for F6XTY4 as seed ortholog is 100%.
Bootstrap support for H3G791 as seed ortholog is 100%.

Group of orthologs #564. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.ramorum:350

F7BH52              	100.00%		H3G9C6              	100.00%
Bootstrap support for F7BH52 as seed ortholog is 99%.
Bootstrap support for H3G9C6 as seed ortholog is 100%.

Group of orthologs #565. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 P.ramorum:350

F6YNH3              	100.00%		H3GY05              	100.00%
Bootstrap support for F6YNH3 as seed ortholog is 100%.
Bootstrap support for H3GY05 as seed ortholog is 100%.

Group of orthologs #566. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 P.ramorum:153

F6Q0M2              	100.00%		H3H7S1              	100.00%
                    	       		H3H546              	36.27%
Bootstrap support for F6Q0M2 as seed ortholog is 82%.
Bootstrap support for H3H7S1 as seed ortholog is 99%.

Group of orthologs #567. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.ramorum:349

F6X4W9              	100.00%		H3G756              	100.00%
Bootstrap support for F6X4W9 as seed ortholog is 99%.
Bootstrap support for H3G756 as seed ortholog is 100%.

Group of orthologs #568. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 P.ramorum:348

F6SZ37              	100.00%		H3GYB8              	100.00%
Bootstrap support for F6SZ37 as seed ortholog is 100%.
Bootstrap support for H3GYB8 as seed ortholog is 100%.

Group of orthologs #569. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 P.ramorum:347

F6VBD0              	100.00%		H3GR54              	100.00%
H2XWC3              	14.18%		H3GYJ2              	14.13%
F6X313              	8.98%		H3HD60              	5.34%
Bootstrap support for F6VBD0 as seed ortholog is 100%.
Bootstrap support for H3GR54 as seed ortholog is 100%.

Group of orthologs #570. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.ramorum:168

F6ZRR5              	100.00%		H3G669              	100.00%
Bootstrap support for F6ZRR5 as seed ortholog is 99%.
Bootstrap support for H3G669 as seed ortholog is 100%.

Group of orthologs #571. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 P.ramorum:281

F6W7N8              	100.00%		H3GUR3              	100.00%
Bootstrap support for F6W7N8 as seed ortholog is 100%.
Bootstrap support for H3GUR3 as seed ortholog is 100%.

Group of orthologs #572. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 P.ramorum:176

F6ZAX9              	100.00%		H3H2C0              	100.00%
H2XN25              	100.00%		H3GGN6              	100.00%
F7BEM7              	24.39%		H3H2B8              	100.00%
F6WKT2              	18.88%		H3H2B5              	59.01%
                    	       		H3GGN3              	51.72%
                    	       		H3H2B7              	51.30%
                    	       		H3H2C1              	46.56%
                    	       		H3GBG4              	34.63%
Bootstrap support for F6ZAX9 as seed ortholog is 100%.
Bootstrap support for H2XN25 as seed ortholog is 100%.
Bootstrap support for H3H2C0 as seed ortholog is 99%.
Bootstrap support for H3GGN6 as seed ortholog is 99%.
Bootstrap support for H3H2B8 as seed ortholog is 99%.

Group of orthologs #573. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 P.ramorum:178

H2XY01              	100.00%		H3GQ46              	100.00%
F6Q7A6              	10.59%		H3GAB1              	20.03%
Bootstrap support for H2XY01 as seed ortholog is 100%.
Bootstrap support for H3GQ46 as seed ortholog is 99%.

Group of orthologs #574. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 P.ramorum:44

F7B3K0              	100.00%		H3G602              	100.00%
Bootstrap support for F7B3K0 as seed ortholog is 75%.
Bootstrap support for H3G602 as seed ortholog is 91%.

Group of orthologs #575. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 P.ramorum:346

F7APB5              	100.00%		H3GAJ6              	100.00%
Bootstrap support for F7APB5 as seed ortholog is 100%.
Bootstrap support for H3GAJ6 as seed ortholog is 100%.

Group of orthologs #576. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 P.ramorum:346

H2XLN7              	100.00%		H3G972              	100.00%
Bootstrap support for H2XLN7 as seed ortholog is 100%.
Bootstrap support for H3G972 as seed ortholog is 100%.

Group of orthologs #577. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 P.ramorum:202

F6ZHM4              	100.00%		H3GK30              	100.00%
Bootstrap support for F6ZHM4 as seed ortholog is 100%.
Bootstrap support for H3GK30 as seed ortholog is 99%.

Group of orthologs #578. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 P.ramorum:222

F6S8Z0              	100.00%		H3G955              	100.00%
Bootstrap support for F6S8Z0 as seed ortholog is 100%.
Bootstrap support for H3G955 as seed ortholog is 100%.

Group of orthologs #579. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 P.ramorum:345

F6WBK6              	100.00%		H3G787              	100.00%
Bootstrap support for F6WBK6 as seed ortholog is 100%.
Bootstrap support for H3G787 as seed ortholog is 100%.

Group of orthologs #580. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 P.ramorum:344

F6RN60              	100.00%		H3G8W6              	100.00%
Bootstrap support for F6RN60 as seed ortholog is 100%.
Bootstrap support for H3G8W6 as seed ortholog is 100%.

Group of orthologs #581. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.ramorum:60

F6SUA6              	100.00%		H3G760              	100.00%
Bootstrap support for F6SUA6 as seed ortholog is 97%.
Bootstrap support for H3G760 as seed ortholog is 92%.

Group of orthologs #582. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.ramorum:149

H2XZC1              	100.00%		H3GET1              	100.00%
Bootstrap support for H2XZC1 as seed ortholog is 99%.
Bootstrap support for H3GET1 as seed ortholog is 99%.

Group of orthologs #583. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.ramorum:61

H2XXD3              	100.00%		H3G992              	100.00%
F6PH07              	6.49%		
Bootstrap support for H2XXD3 as seed ortholog is 99%.
Bootstrap support for H3G992 as seed ortholog is 97%.

Group of orthologs #584. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 P.ramorum:343

F6XJU3              	100.00%		H3GSD4              	100.00%
Bootstrap support for F6XJU3 as seed ortholog is 100%.
Bootstrap support for H3GSD4 as seed ortholog is 100%.

Group of orthologs #585. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.ramorum:186

F6TZ34              	100.00%		H3G939              	100.00%
Bootstrap support for F6TZ34 as seed ortholog is 96%.
Bootstrap support for H3G939 as seed ortholog is 100%.

Group of orthologs #586. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 P.ramorum:342

F6VN41              	100.00%		H3G5C0              	100.00%
Bootstrap support for F6VN41 as seed ortholog is 100%.
Bootstrap support for H3G5C0 as seed ortholog is 100%.

Group of orthologs #587. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 P.ramorum:261

F6ZFW2              	100.00%		H3GJ12              	100.00%
                    	       		H3G6I8              	66.29%
Bootstrap support for F6ZFW2 as seed ortholog is 100%.
Bootstrap support for H3GJ12 as seed ortholog is 100%.

Group of orthologs #588. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 P.ramorum:341

F6QE47              	100.00%		H3GG49              	100.00%
Bootstrap support for F6QE47 as seed ortholog is 100%.
Bootstrap support for H3GG49 as seed ortholog is 100%.

Group of orthologs #589. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 P.ramorum:341

F6X600              	100.00%		H3G4X8              	100.00%
Bootstrap support for F6X600 as seed ortholog is 100%.
Bootstrap support for H3G4X8 as seed ortholog is 100%.

Group of orthologs #590. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 P.ramorum:341

F6YIY8              	100.00%		H3G854              	100.00%
Bootstrap support for F6YIY8 as seed ortholog is 100%.
Bootstrap support for H3G854 as seed ortholog is 100%.

Group of orthologs #591. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 P.ramorum:341

F7A172              	100.00%		H3G8C3              	100.00%
Bootstrap support for F7A172 as seed ortholog is 100%.
Bootstrap support for H3G8C3 as seed ortholog is 100%.

Group of orthologs #592. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 P.ramorum:341

H2XM91              	100.00%		H3G5Z6              	100.00%
Bootstrap support for H2XM91 as seed ortholog is 100%.
Bootstrap support for H3G5Z6 as seed ortholog is 100%.

Group of orthologs #593. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.ramorum:40

H2XNC3              	100.00%		H3G568              	100.00%
Bootstrap support for H2XNC3 as seed ortholog is 99%.
Bootstrap support for H3G568 as seed ortholog is 87%.

Group of orthologs #594. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 P.ramorum:340

F7BDE0              	100.00%		H3GTM3              	100.00%
Bootstrap support for F7BDE0 as seed ortholog is 100%.
Bootstrap support for H3GTM3 as seed ortholog is 100%.

Group of orthologs #595. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 P.ramorum:236

F6PW34              	100.00%		H3G945              	100.00%
Bootstrap support for F6PW34 as seed ortholog is 100%.
Bootstrap support for H3G945 as seed ortholog is 100%.

Group of orthologs #596. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 P.ramorum:339

F6XHC0              	100.00%		H3GA31              	100.00%
Bootstrap support for F6XHC0 as seed ortholog is 100%.
Bootstrap support for H3GA31 as seed ortholog is 100%.

Group of orthologs #597. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 P.ramorum:339

F7B4V9              	100.00%		H3GWA8              	100.00%
Bootstrap support for F7B4V9 as seed ortholog is 100%.
Bootstrap support for H3GWA8 as seed ortholog is 100%.

Group of orthologs #598. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.ramorum:254

F6RBW8              	100.00%		H3G8N1              	100.00%
Bootstrap support for F6RBW8 as seed ortholog is 85%.
Bootstrap support for H3G8N1 as seed ortholog is 100%.

Group of orthologs #599. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 P.ramorum:338

F6ZX12              	100.00%		H3G7S9              	100.00%
Bootstrap support for F6ZX12 as seed ortholog is 100%.
Bootstrap support for H3G7S9 as seed ortholog is 100%.

Group of orthologs #600. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.ramorum:337

F6XKQ1              	100.00%		H3G9S5              	100.00%
Bootstrap support for F6XKQ1 as seed ortholog is 100%.
Bootstrap support for H3G9S5 as seed ortholog is 100%.

Group of orthologs #601. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 P.ramorum:337

F6YA95              	100.00%		H3GLH5              	100.00%
Bootstrap support for F6YA95 as seed ortholog is 100%.
Bootstrap support for H3GLH5 as seed ortholog is 100%.

Group of orthologs #602. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 P.ramorum:337

F6X3Q7              	100.00%		H3GSD7              	100.00%
Bootstrap support for F6X3Q7 as seed ortholog is 100%.
Bootstrap support for H3GSD7 as seed ortholog is 100%.

Group of orthologs #603. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 P.ramorum:336

F6ZVC8              	100.00%		H3GAM5              	100.00%
Bootstrap support for F6ZVC8 as seed ortholog is 98%.
Bootstrap support for H3GAM5 as seed ortholog is 100%.

Group of orthologs #604. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.ramorum:290

F6WWK0              	100.00%		H3GS79              	100.00%
Bootstrap support for F6WWK0 as seed ortholog is 100%.
Bootstrap support for H3GS79 as seed ortholog is 100%.

Group of orthologs #605. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 P.ramorum:246

F6W9I8              	100.00%		H3GV09              	100.00%
Bootstrap support for F6W9I8 as seed ortholog is 100%.
Bootstrap support for H3GV09 as seed ortholog is 100%.

Group of orthologs #606. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 P.ramorum:336

F6U1E2              	100.00%		H3HCD9              	100.00%
Bootstrap support for F6U1E2 as seed ortholog is 100%.
Bootstrap support for H3HCD9 as seed ortholog is 100%.

Group of orthologs #607. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 P.ramorum:335

F6UE78              	100.00%		H3GML7              	100.00%
Bootstrap support for F6UE78 as seed ortholog is 100%.
Bootstrap support for H3GML7 as seed ortholog is 100%.

Group of orthologs #608. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 P.ramorum:335

F7B658              	100.00%		H3GV85              	100.00%
Bootstrap support for F7B658 as seed ortholog is 100%.
Bootstrap support for H3GV85 as seed ortholog is 100%.

Group of orthologs #609. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 P.ramorum:335

F6YHS8              	100.00%		H3H2P4              	100.00%
Bootstrap support for F6YHS8 as seed ortholog is 100%.
Bootstrap support for H3H2P4 as seed ortholog is 100%.

Group of orthologs #610. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 P.ramorum:334

F6PRY2              	100.00%		H3GVD4              	100.00%
Bootstrap support for F6PRY2 as seed ortholog is 100%.
Bootstrap support for H3GVD4 as seed ortholog is 100%.

Group of orthologs #611. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 P.ramorum:334

F6ZYI6              	100.00%		H3GA55              	100.00%
Bootstrap support for F6ZYI6 as seed ortholog is 100%.
Bootstrap support for H3GA55 as seed ortholog is 100%.

Group of orthologs #612. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.ramorum:124

H2XQ03              	100.00%		H3GDL5              	100.00%
Bootstrap support for H2XQ03 as seed ortholog is 69%.
Alternative seed ortholog is F6XCH5 (61 bits away from this cluster)
Bootstrap support for H3GDL5 as seed ortholog is 98%.

Group of orthologs #613. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 P.ramorum:333

F6UAZ6              	100.00%		H3GG46              	100.00%
Bootstrap support for F6UAZ6 as seed ortholog is 100%.
Bootstrap support for H3GG46 as seed ortholog is 100%.

Group of orthologs #614. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 P.ramorum:333

F6THM1              	100.00%		H3GMD2              	100.00%
Bootstrap support for F6THM1 as seed ortholog is 100%.
Bootstrap support for H3GMD2 as seed ortholog is 100%.

Group of orthologs #615. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.ramorum:45

F6UK45              	100.00%		H3GZU5              	100.00%
                    	       		H3H6G7              	85.20%
Bootstrap support for F6UK45 as seed ortholog is 100%.
Bootstrap support for H3GZU5 as seed ortholog is 96%.

Group of orthologs #616. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 P.ramorum:332

F6TTJ7              	100.00%		H3G8M7              	100.00%
Bootstrap support for F6TTJ7 as seed ortholog is 100%.
Bootstrap support for H3G8M7 as seed ortholog is 100%.

Group of orthologs #617. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 P.ramorum:332

F6VT08              	100.00%		H3G8Y4              	100.00%
Bootstrap support for F6VT08 as seed ortholog is 100%.
Bootstrap support for H3G8Y4 as seed ortholog is 100%.

Group of orthologs #618. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.ramorum:155

F6TC27              	100.00%		H3GFQ5              	100.00%
Bootstrap support for F6TC27 as seed ortholog is 99%.
Bootstrap support for H3GFQ5 as seed ortholog is 99%.

Group of orthologs #619. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.ramorum:332

F6TJJ7              	100.00%		H3GSZ7              	100.00%
Bootstrap support for F6TJJ7 as seed ortholog is 79%.
Bootstrap support for H3GSZ7 as seed ortholog is 100%.

Group of orthologs #620. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 P.ramorum:82

H2XTS9              	100.00%		H3GMF2              	100.00%
Bootstrap support for H2XTS9 as seed ortholog is 99%.
Bootstrap support for H3GMF2 as seed ortholog is 92%.

Group of orthologs #621. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 P.ramorum:332

F6YM78              	100.00%		H3HCH5              	100.00%
Bootstrap support for F6YM78 as seed ortholog is 100%.
Bootstrap support for H3HCH5 as seed ortholog is 100%.

Group of orthologs #622. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.ramorum:72

F6X753              	100.00%		H3H076              	100.00%
L7N0R8              	100.00%		H3GF94              	100.00%
Bootstrap support for F6X753 as seed ortholog is 93%.
Bootstrap support for L7N0R8 as seed ortholog is 74%.
Alternative seed ortholog is F6UR44 (68 bits away from this cluster)
Bootstrap support for H3H076 as seed ortholog is 91%.
Bootstrap support for H3GF94 as seed ortholog is 80%.

Group of orthologs #623. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 P.ramorum:330

F7BHB2              	100.00%		H3G6G3              	100.00%
                    	       		H3G7P1              	13.02%
Bootstrap support for F7BHB2 as seed ortholog is 100%.
Bootstrap support for H3G6G3 as seed ortholog is 100%.

Group of orthologs #624. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 P.ramorum:330

H2XZY0              	100.00%		H3HBV1              	100.00%
Bootstrap support for H2XZY0 as seed ortholog is 100%.
Bootstrap support for H3HBV1 as seed ortholog is 100%.

Group of orthologs #625. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.ramorum:47

F6S4F7              	100.00%		H3HDS7              	100.00%
                    	       		H3GWJ8              	10.07%
                    	       		H3HC38              	6.12%
                    	       		H3G9W4              	5.76%
Bootstrap support for F6S4F7 as seed ortholog is 92%.
Bootstrap support for H3HDS7 as seed ortholog is 90%.

Group of orthologs #626. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 P.ramorum:65

F6SPK3              	100.00%		H3HBW3              	100.00%
H2Y107              	13.81%		
Bootstrap support for F6SPK3 as seed ortholog is 100%.
Bootstrap support for H3HBW3 as seed ortholog is 90%.

Group of orthologs #627. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 P.ramorum:329

F6VEU2              	100.00%		H3G7W7              	100.00%
Bootstrap support for F6VEU2 as seed ortholog is 100%.
Bootstrap support for H3G7W7 as seed ortholog is 100%.

Group of orthologs #628. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 P.ramorum:329

F6XMP8              	100.00%		H3GAU6              	100.00%
Bootstrap support for F6XMP8 as seed ortholog is 100%.
Bootstrap support for H3GAU6 as seed ortholog is 100%.

Group of orthologs #629. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 P.ramorum:328

F6RKU1              	100.00%		H3G500              	100.00%
Bootstrap support for F6RKU1 as seed ortholog is 100%.
Bootstrap support for H3G500 as seed ortholog is 100%.

Group of orthologs #630. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 P.ramorum:274

F6SP32              	100.00%		H3GAL1              	100.00%
Bootstrap support for F6SP32 as seed ortholog is 100%.
Bootstrap support for H3GAL1 as seed ortholog is 100%.

Group of orthologs #631. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 P.ramorum:328

F6TPA2              	100.00%		H3GTC8              	100.00%
Bootstrap support for F6TPA2 as seed ortholog is 100%.
Bootstrap support for H3GTC8 as seed ortholog is 100%.

Group of orthologs #632. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 P.ramorum:328

F6Z672              	100.00%		H3H1H3              	100.00%
Bootstrap support for F6Z672 as seed ortholog is 100%.
Bootstrap support for H3H1H3 as seed ortholog is 100%.

Group of orthologs #633. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 P.ramorum:327

F6UFF5              	100.00%		H3G934              	100.00%
Bootstrap support for F6UFF5 as seed ortholog is 100%.
Bootstrap support for H3G934 as seed ortholog is 100%.

Group of orthologs #634. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 P.ramorum:326

F6TMB1              	100.00%		H3G884              	100.00%
Bootstrap support for F6TMB1 as seed ortholog is 100%.
Bootstrap support for H3G884 as seed ortholog is 100%.

Group of orthologs #635. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 P.ramorum:326

F7BH80              	100.00%		H3H0F3              	100.00%
Bootstrap support for F7BH80 as seed ortholog is 100%.
Bootstrap support for H3H0F3 as seed ortholog is 100%.

Group of orthologs #636. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 P.ramorum:323

H2XM50              	100.00%		H3GA06              	100.00%
F6R614              	29.81%		
Bootstrap support for H2XM50 as seed ortholog is 100%.
Bootstrap support for H3GA06 as seed ortholog is 100%.

Group of orthologs #637. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 P.ramorum:28

Q32TF6              	100.00%		H3GXD9              	100.00%
F6XBA5              	5.43%		
Bootstrap support for Q32TF6 as seed ortholog is 100%.
Bootstrap support for H3GXD9 as seed ortholog is 68%.
Alternative seed ortholog is H3HBB4 (28 bits away from this cluster)

Group of orthologs #638. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 P.ramorum:322

F6TLL4              	100.00%		H3GAD3              	100.00%
Bootstrap support for F6TLL4 as seed ortholog is 100%.
Bootstrap support for H3GAD3 as seed ortholog is 100%.

Group of orthologs #639. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 P.ramorum:322

H2XWZ0              	100.00%		H3GCB9              	100.00%
Bootstrap support for H2XWZ0 as seed ortholog is 100%.
Bootstrap support for H3GCB9 as seed ortholog is 100%.

Group of orthologs #640. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 P.ramorum:259

F6TIU3              	100.00%		H3GAG1              	100.00%
Bootstrap support for F6TIU3 as seed ortholog is 100%.
Bootstrap support for H3GAG1 as seed ortholog is 100%.

Group of orthologs #641. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 P.ramorum:321

F7AGW4              	100.00%		H3GVK0              	100.00%
Bootstrap support for F7AGW4 as seed ortholog is 100%.
Bootstrap support for H3GVK0 as seed ortholog is 100%.

Group of orthologs #642. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.ramorum:320

F6WL19              	100.00%		H3GAR2              	100.00%
F6TNW3              	23.33%		
Bootstrap support for F6WL19 as seed ortholog is 99%.
Bootstrap support for H3GAR2 as seed ortholog is 100%.

Group of orthologs #643. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 P.ramorum:320

F6PNT4              	100.00%		H3GTS6              	100.00%
                    	       		H3GPZ0              	52.59%
Bootstrap support for F6PNT4 as seed ortholog is 100%.
Bootstrap support for H3GTS6 as seed ortholog is 100%.

Group of orthologs #644. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 P.ramorum:320

F6UJM5              	100.00%		H3G8K0              	100.00%
Bootstrap support for F6UJM5 as seed ortholog is 100%.
Bootstrap support for H3G8K0 as seed ortholog is 100%.

Group of orthologs #645. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:320

F6WNE0              	100.00%		H3HE41              	100.00%
Bootstrap support for F6WNE0 as seed ortholog is 92%.
Bootstrap support for H3HE41 as seed ortholog is 100%.

Group of orthologs #646. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 P.ramorum:319

F6W713              	100.00%		H3G6M0              	100.00%
Bootstrap support for F6W713 as seed ortholog is 100%.
Bootstrap support for H3G6M0 as seed ortholog is 100%.

Group of orthologs #647. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.ramorum:138

F6WXG6              	100.00%		H3G5K9              	100.00%
Bootstrap support for F6WXG6 as seed ortholog is 96%.
Bootstrap support for H3G5K9 as seed ortholog is 99%.

Group of orthologs #648. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 P.ramorum:319

F6QY24              	100.00%		H3GQ96              	100.00%
Bootstrap support for F6QY24 as seed ortholog is 100%.
Bootstrap support for H3GQ96 as seed ortholog is 100%.

Group of orthologs #649. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.ramorum:139

F7AQG9              	100.00%		H3G588              	100.00%
Bootstrap support for F7AQG9 as seed ortholog is 99%.
Bootstrap support for H3G588 as seed ortholog is 99%.

Group of orthologs #650. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 P.ramorum:195

F6R5G5              	100.00%		H3GV19              	100.00%
Bootstrap support for F6R5G5 as seed ortholog is 100%.
Bootstrap support for H3GV19 as seed ortholog is 100%.

Group of orthologs #651. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 P.ramorum:319

F6YH10              	100.00%		H3GET8              	100.00%
Bootstrap support for F6YH10 as seed ortholog is 100%.
Bootstrap support for H3GET8 as seed ortholog is 100%.

Group of orthologs #652. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 P.ramorum:14

F6YWY7              	100.00%		H3GKU6              	100.00%
Bootstrap support for F6YWY7 as seed ortholog is 100%.
Bootstrap support for H3GKU6 as seed ortholog is 65%.
Alternative seed ortholog is H3H2X6 (14 bits away from this cluster)

Group of orthologs #653. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.ramorum:269

F6VXM8              	100.00%		H3G8N3              	100.00%
                    	       		H3HDW5              	15.01%
Bootstrap support for F6VXM8 as seed ortholog is 99%.
Bootstrap support for H3G8N3 as seed ortholog is 100%.

Group of orthologs #654. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 P.ramorum:318

F6R589              	100.00%		H3G9U4              	100.00%
Bootstrap support for F6R589 as seed ortholog is 100%.
Bootstrap support for H3G9U4 as seed ortholog is 100%.

Group of orthologs #655. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 P.ramorum:317

H2XVC3              	100.00%		H3G7E6              	100.00%
Bootstrap support for H2XVC3 as seed ortholog is 100%.
Bootstrap support for H3G7E6 as seed ortholog is 100%.

Group of orthologs #656. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 P.ramorum:271

H2Y2L0              	100.00%		H3G890              	100.00%
Bootstrap support for H2Y2L0 as seed ortholog is 100%.
Bootstrap support for H3G890 as seed ortholog is 100%.

Group of orthologs #657. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 P.ramorum:129

F7B5X2              	100.00%		H3GVG2              	100.00%
                    	       		H3GD31              	9.28%
                    	       		H3GD28              	7.72%
                    	       		H3GD38              	5.62%
                    	       		H3GD30              	5.54%
Bootstrap support for F7B5X2 as seed ortholog is 100%.
Bootstrap support for H3GVG2 as seed ortholog is 98%.

Group of orthologs #658. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 P.ramorum:98

F6S9F0              	100.00%		H3G5H1              	100.00%
Bootstrap support for F6S9F0 as seed ortholog is 100%.
Bootstrap support for H3G5H1 as seed ortholog is 99%.

Group of orthologs #659. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 P.ramorum:316

H2Y3K9              	100.00%		H3G9V6              	100.00%
Bootstrap support for H2Y3K9 as seed ortholog is 99%.
Bootstrap support for H3G9V6 as seed ortholog is 100%.

Group of orthologs #660. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 P.ramorum:316

F6Z910              	100.00%		H3HDQ1              	100.00%
Bootstrap support for F6Z910 as seed ortholog is 100%.
Bootstrap support for H3HDQ1 as seed ortholog is 100%.

Group of orthologs #661. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 P.ramorum:315

H2Y0S6              	100.00%		H3GZ79              	100.00%
                    	       		H3H6Q0              	52.67%
                    	       		H3H4H7              	48.14%
Bootstrap support for H2Y0S6 as seed ortholog is 100%.
Bootstrap support for H3GZ79 as seed ortholog is 100%.

Group of orthologs #662. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:122

F6VL21              	100.00%		H3GQG0              	100.00%
Bootstrap support for F6VL21 as seed ortholog is 98%.
Bootstrap support for H3GQG0 as seed ortholog is 99%.

Group of orthologs #663. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 P.ramorum:314

Q6XZ09              	100.00%		H3G9J8              	100.00%
Q6XZ10              	78.19%		
Q6XV77              	13.63%		
Bootstrap support for Q6XZ09 as seed ortholog is 100%.
Bootstrap support for H3G9J8 as seed ortholog is 100%.

Group of orthologs #664. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 P.ramorum:314

F6TXT5              	100.00%		H3G9T2              	100.00%
Bootstrap support for F6TXT5 as seed ortholog is 100%.
Bootstrap support for H3G9T2 as seed ortholog is 100%.

Group of orthologs #665. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 P.ramorum:314

F6WHS8              	100.00%		H3HDH6              	100.00%
Bootstrap support for F6WHS8 as seed ortholog is 100%.
Bootstrap support for H3HDH6 as seed ortholog is 100%.

Group of orthologs #666. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 P.ramorum:314

H2XSL3              	100.00%		H3GZ80              	100.00%
Bootstrap support for H2XSL3 as seed ortholog is 100%.
Bootstrap support for H3GZ80 as seed ortholog is 100%.

Group of orthologs #667. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 P.ramorum:109

H2Y040              	100.00%		H3G8L2              	100.00%
                    	       		H3G8L3              	98.21%
Bootstrap support for H2Y040 as seed ortholog is 91%.
Bootstrap support for H3G8L2 as seed ortholog is 100%.

Group of orthologs #668. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 P.ramorum:313

H2Y2X4              	100.00%		H3GP15              	100.00%
                    	       		H3GDM2              	14.42%
Bootstrap support for H2Y2X4 as seed ortholog is 100%.
Bootstrap support for H3GP15 as seed ortholog is 100%.

Group of orthologs #669. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 P.ramorum:312

F6SSM8              	100.00%		H3G6Y2              	100.00%
Bootstrap support for F6SSM8 as seed ortholog is 100%.
Bootstrap support for H3G6Y2 as seed ortholog is 100%.

Group of orthologs #670. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.ramorum:312

F6U1K7              	100.00%		H3GR83              	100.00%
Bootstrap support for F6U1K7 as seed ortholog is 91%.
Bootstrap support for H3GR83 as seed ortholog is 100%.

Group of orthologs #671. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 P.ramorum:311

F6ZCS4              	100.00%		H3G8C1              	100.00%
Bootstrap support for F6ZCS4 as seed ortholog is 100%.
Bootstrap support for H3G8C1 as seed ortholog is 100%.

Group of orthologs #672. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.ramorum:17

F6UK82              	100.00%		H3GKN9              	100.00%
Bootstrap support for F6UK82 as seed ortholog is 98%.
Bootstrap support for H3GKN9 as seed ortholog is 50%.
Alternative seed ortholog is H3G9M8 (17 bits away from this cluster)

Group of orthologs #673. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 P.ramorum:252

F6RA65              	100.00%		H3HED0              	100.00%
Bootstrap support for F6RA65 as seed ortholog is 100%.
Bootstrap support for H3HED0 as seed ortholog is 100%.

Group of orthologs #674. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 P.ramorum:179

H2XLN0              	100.00%		H3H368              	100.00%
Bootstrap support for H2XLN0 as seed ortholog is 61%.
Alternative seed ortholog is F6VM60 (16 bits away from this cluster)
Bootstrap support for H3H368 as seed ortholog is 99%.

Group of orthologs #675. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 P.ramorum:310

F6QSK8              	100.00%		H3GFY5              	100.00%
Bootstrap support for F6QSK8 as seed ortholog is 100%.
Bootstrap support for H3GFY5 as seed ortholog is 100%.

Group of orthologs #676. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 P.ramorum:310

F6QD44              	100.00%		H3GIQ0              	100.00%
Bootstrap support for F6QD44 as seed ortholog is 100%.
Bootstrap support for H3GIQ0 as seed ortholog is 100%.

Group of orthologs #677. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 P.ramorum:238

F6XDT3              	100.00%		H3GAI3              	100.00%
Bootstrap support for F6XDT3 as seed ortholog is 100%.
Bootstrap support for H3GAI3 as seed ortholog is 100%.

Group of orthologs #678. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 P.ramorum:310

F7ATT1              	100.00%		H3G5M2              	100.00%
Bootstrap support for F7ATT1 as seed ortholog is 100%.
Bootstrap support for H3G5M2 as seed ortholog is 100%.

Group of orthologs #679. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 P.ramorum:309

F6X9G1              	100.00%		H3GB79              	100.00%
                    	       		H3H0L5              	100.00%
                    	       		H3GAH3              	99.07%
                    	       		H3H6H4              	46.17%
Bootstrap support for F6X9G1 as seed ortholog is 100%.
Bootstrap support for H3GB79 as seed ortholog is 100%.
Bootstrap support for H3H0L5 as seed ortholog is 100%.

Group of orthologs #680. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 P.ramorum:166

F6SZ94              	100.00%		H3GT98              	100.00%
                    	       		H3GC77              	6.49%
Bootstrap support for F6SZ94 as seed ortholog is 75%.
Bootstrap support for H3GT98 as seed ortholog is 99%.

Group of orthologs #681. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 P.ramorum:309

F6PRZ9              	100.00%		H3GT40              	100.00%
Bootstrap support for F6PRZ9 as seed ortholog is 100%.
Bootstrap support for H3GT40 as seed ortholog is 100%.

Group of orthologs #682. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 P.ramorum:47

F7A515              	100.00%		H3G876              	100.00%
Bootstrap support for F7A515 as seed ortholog is 100%.
Bootstrap support for H3G876 as seed ortholog is 91%.

Group of orthologs #683. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.ramorum:309

H2XYW0              	100.00%		H3G7T3              	100.00%
Bootstrap support for H2XYW0 as seed ortholog is 100%.
Bootstrap support for H3G7T3 as seed ortholog is 100%.

Group of orthologs #684. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 P.ramorum:309

H2Y1U3              	100.00%		H3GNU0              	100.00%
Bootstrap support for H2Y1U3 as seed ortholog is 100%.
Bootstrap support for H3GNU0 as seed ortholog is 100%.

Group of orthologs #685. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 P.ramorum:308

F6W446              	100.00%		H3G9Y6              	100.00%
F7BGT4              	14.03%		
F6PPP8              	12.44%		
Bootstrap support for F6W446 as seed ortholog is 55%.
Alternative seed ortholog is H2Y1G5 (4 bits away from this cluster)
Bootstrap support for H3G9Y6 as seed ortholog is 100%.

Group of orthologs #686. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.ramorum:88

F6WVT9              	100.00%		H3GXW8              	100.00%
F6QZH0              	14.33%		
Bootstrap support for F6WVT9 as seed ortholog is 99%.
Bootstrap support for H3GXW8 as seed ortholog is 98%.

Group of orthologs #687. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 P.ramorum:53

F6TQG1              	100.00%		H3GT84              	100.00%
Bootstrap support for F6TQG1 as seed ortholog is 100%.
Bootstrap support for H3GT84 as seed ortholog is 94%.

Group of orthologs #688. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.ramorum:77

F6XD08              	100.00%		H3H170              	100.00%
Bootstrap support for F6XD08 as seed ortholog is 81%.
Bootstrap support for H3H170 as seed ortholog is 81%.

Group of orthologs #689. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 P.ramorum:307

F6RS75              	100.00%		H3G868              	100.00%
Bootstrap support for F6RS75 as seed ortholog is 100%.
Bootstrap support for H3G868 as seed ortholog is 100%.

Group of orthologs #690. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 P.ramorum:307

F6VCG5              	100.00%		H3G8I1              	100.00%
Bootstrap support for F6VCG5 as seed ortholog is 100%.
Bootstrap support for H3G8I1 as seed ortholog is 100%.

Group of orthologs #691. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 P.ramorum:307

F6X2C4              	100.00%		H3GAW1              	100.00%
Bootstrap support for F6X2C4 as seed ortholog is 100%.
Bootstrap support for H3GAW1 as seed ortholog is 100%.

Group of orthologs #692. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 P.ramorum:307

H2Y1M1              	100.00%		H3G9V8              	100.00%
Bootstrap support for H2Y1M1 as seed ortholog is 100%.
Bootstrap support for H3G9V8 as seed ortholog is 100%.

Group of orthologs #693. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.ramorum:306

F7B684              	100.00%		H3GAH0              	100.00%
F6U4H3              	7.58%		
Bootstrap support for F7B684 as seed ortholog is 100%.
Bootstrap support for H3GAH0 as seed ortholog is 100%.

Group of orthologs #694. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 P.ramorum:306

F6QCQ5              	100.00%		H3G7B0              	100.00%
Bootstrap support for F6QCQ5 as seed ortholog is 100%.
Bootstrap support for H3G7B0 as seed ortholog is 100%.

Group of orthologs #695. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.ramorum:306

F6T4Y7              	100.00%		H3GFG5              	100.00%
Bootstrap support for F6T4Y7 as seed ortholog is 99%.
Bootstrap support for H3GFG5 as seed ortholog is 100%.

Group of orthologs #696. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 P.ramorum:306

F6SF69              	100.00%		H3GJB8              	100.00%
Bootstrap support for F6SF69 as seed ortholog is 100%.
Bootstrap support for H3GJB8 as seed ortholog is 100%.

Group of orthologs #697. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.ramorum:59

H2XL87              	100.00%		H3G8X5              	100.00%
Bootstrap support for H2XL87 as seed ortholog is 99%.
Bootstrap support for H3G8X5 as seed ortholog is 99%.

Group of orthologs #698. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.ramorum:99

H2Y1B2              	100.00%		H3G6T1              	100.00%
Bootstrap support for H2Y1B2 as seed ortholog is 99%.
Bootstrap support for H3G6T1 as seed ortholog is 100%.

Group of orthologs #699. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.ramorum:252

F6YEH2              	100.00%		H3HDU7              	100.00%
Bootstrap support for F6YEH2 as seed ortholog is 99%.
Bootstrap support for H3HDU7 as seed ortholog is 100%.

Group of orthologs #700. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 P.ramorum:305

F6SSI8              	100.00%		H3G6W0              	100.00%
Bootstrap support for F6SSI8 as seed ortholog is 100%.
Bootstrap support for H3G6W0 as seed ortholog is 100%.

Group of orthologs #701. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 P.ramorum:147

F6T0J5              	100.00%		H3GBZ7              	100.00%
Bootstrap support for F6T0J5 as seed ortholog is 100%.
Bootstrap support for H3GBZ7 as seed ortholog is 100%.

Group of orthologs #702. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.ramorum:140

F6XCQ7              	100.00%		H3G8U7              	100.00%
Bootstrap support for F6XCQ7 as seed ortholog is 99%.
Bootstrap support for H3G8U7 as seed ortholog is 100%.

Group of orthologs #703. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 P.ramorum:305

F6PPP3              	100.00%		H3GY08              	100.00%
Bootstrap support for F6PPP3 as seed ortholog is 100%.
Bootstrap support for H3GY08 as seed ortholog is 100%.

Group of orthologs #704. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 P.ramorum:22

F6ZBI9              	100.00%		H3G775              	100.00%
                    	       		H3G697              	18.57%
                    	       		H3G698              	18.24%
Bootstrap support for F6ZBI9 as seed ortholog is 63%.
Alternative seed ortholog is F6VNW9 (15 bits away from this cluster)
Bootstrap support for H3G775 as seed ortholog is 69%.
Alternative seed ortholog is H3G7X2 (22 bits away from this cluster)

Group of orthologs #705. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 P.ramorum:304

F6Z1E3              	100.00%		H3G898              	100.00%
Bootstrap support for F6Z1E3 as seed ortholog is 100%.
Bootstrap support for H3G898 as seed ortholog is 100%.

Group of orthologs #706. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 P.ramorum:304

H2Y2K2              	100.00%		H3GI10              	100.00%
Bootstrap support for H2Y2K2 as seed ortholog is 100%.
Bootstrap support for H3GI10 as seed ortholog is 100%.

Group of orthologs #707. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.ramorum:234

Q7YT79              	100.00%		H3GB56              	100.00%
F6PNQ0              	35.48%		H3GAE8              	84.54%
F6PNI9              	9.68%		
Bootstrap support for Q7YT79 as seed ortholog is 98%.
Bootstrap support for H3GB56 as seed ortholog is 100%.

Group of orthologs #708. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 P.ramorum:39

F6UJI9              	100.00%		H3G9E5              	100.00%
Bootstrap support for F6UJI9 as seed ortholog is 100%.
Bootstrap support for H3G9E5 as seed ortholog is 83%.

Group of orthologs #709. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:217

F6X4A8              	100.00%		H3G889              	100.00%
Bootstrap support for F6X4A8 as seed ortholog is 99%.
Bootstrap support for H3G889 as seed ortholog is 100%.

Group of orthologs #710. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 P.ramorum:303

F6UUI8              	100.00%		H3GEE9              	100.00%
Bootstrap support for F6UUI8 as seed ortholog is 100%.
Bootstrap support for H3GEE9 as seed ortholog is 100%.

Group of orthologs #711. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 P.ramorum:303

F6ZLM3              	100.00%		H3G993              	100.00%
Bootstrap support for F6ZLM3 as seed ortholog is 100%.
Bootstrap support for H3G993 as seed ortholog is 100%.

Group of orthologs #712. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 P.ramorum:302

F7BDV2              	100.00%		H3H1I2              	100.00%
Bootstrap support for F7BDV2 as seed ortholog is 100%.
Bootstrap support for H3H1I2 as seed ortholog is 100%.

Group of orthologs #713. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 P.ramorum:301

Q4H3S6              	100.00%		H3GB12              	100.00%
                    	       		H3G596              	83.26%
Bootstrap support for Q4H3S6 as seed ortholog is 100%.
Bootstrap support for H3GB12 as seed ortholog is 100%.

Group of orthologs #714. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 P.ramorum:301

F6XL41              	100.00%		H3HC98              	100.00%
                    	       		H3H721              	66.09%
Bootstrap support for F6XL41 as seed ortholog is 100%.
Bootstrap support for H3HC98 as seed ortholog is 100%.

Group of orthologs #715. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 P.ramorum:301

F6SYW5              	100.00%		H3GQC7              	100.00%
Bootstrap support for F6SYW5 as seed ortholog is 100%.
Bootstrap support for H3GQC7 as seed ortholog is 100%.

Group of orthologs #716. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 P.ramorum:301

F7A5R9              	100.00%		H3G8T1              	100.00%
Bootstrap support for F7A5R9 as seed ortholog is 100%.
Bootstrap support for H3G8T1 as seed ortholog is 100%.

Group of orthologs #717. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 P.ramorum:53

F7BIS1              	100.00%		H3H1K4              	100.00%
Bootstrap support for F7BIS1 as seed ortholog is 100%.
Bootstrap support for H3H1K4 as seed ortholog is 71%.
Alternative seed ortholog is H3HDF5 (53 bits away from this cluster)

Group of orthologs #718. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.ramorum:204

F6QL57              	100.00%		H3G604              	100.00%
H2Y3M9              	100.00%		H3GDZ7              	100.00%
F6UFU1              	47.99%		H3GPF0              	48.02%
F6UGQ7              	12.64%		H3G605              	44.77%
                    	       		H3G606              	23.69%
                    	       		H3G5B9              	19.97%
Bootstrap support for F6QL57 as seed ortholog is 93%.
Bootstrap support for H2Y3M9 as seed ortholog is 88%.
Bootstrap support for H3G604 as seed ortholog is 100%.
Bootstrap support for H3GDZ7 as seed ortholog is 99%.

Group of orthologs #719. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.ramorum:64

F6WNB2              	100.00%		H3GT70              	100.00%
F6PL57              	6.80%		
Bootstrap support for F6WNB2 as seed ortholog is 93%.
Bootstrap support for H3GT70 as seed ortholog is 88%.

Group of orthologs #720. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 P.ramorum:300

F6WEC9              	100.00%		H3GHB8              	100.00%
Bootstrap support for F6WEC9 as seed ortholog is 100%.
Bootstrap support for H3GHB8 as seed ortholog is 100%.

Group of orthologs #721. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.ramorum:90

F7AZI8              	100.00%		H3G9Y3              	100.00%
Bootstrap support for F7AZI8 as seed ortholog is 94%.
Bootstrap support for H3G9Y3 as seed ortholog is 99%.

Group of orthologs #722. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.ramorum:102

F6T718              	100.00%		H3HBD0              	100.00%
Bootstrap support for F6T718 as seed ortholog is 99%.
Bootstrap support for H3HBD0 as seed ortholog is 99%.

Group of orthologs #723. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 P.ramorum:300

F6UUV9              	100.00%		H3HAT3              	100.00%
Bootstrap support for F6UUV9 as seed ortholog is 100%.
Bootstrap support for H3HAT3 as seed ortholog is 100%.

Group of orthologs #724. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 P.ramorum:210

F6TFE2              	100.00%		H3G9Y2              	100.00%
Bootstrap support for F6TFE2 as seed ortholog is 100%.
Bootstrap support for H3G9Y2 as seed ortholog is 100%.

Group of orthologs #725. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 P.ramorum:32

F6ZIB9              	100.00%		H3G6B7              	100.00%
Bootstrap support for F6ZIB9 as seed ortholog is 100%.
Bootstrap support for H3G6B7 as seed ortholog is 84%.

Group of orthologs #726. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.ramorum:177

H2XR98              	100.00%		H3GBB6              	100.00%
Bootstrap support for H2XR98 as seed ortholog is 99%.
Bootstrap support for H3GBB6 as seed ortholog is 100%.

Group of orthologs #727. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.ramorum:243

F6W097              	100.00%		H3GXP2              	100.00%
Bootstrap support for F6W097 as seed ortholog is 81%.
Bootstrap support for H3GXP2 as seed ortholog is 100%.

Group of orthologs #728. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 P.ramorum:299

H2Y3Q6              	100.00%		H3G9E0              	100.00%
Bootstrap support for H2Y3Q6 as seed ortholog is 100%.
Bootstrap support for H3G9E0 as seed ortholog is 100%.

Group of orthologs #729. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:299

H2Y323              	100.00%		H3HD31              	100.00%
Bootstrap support for H2Y323 as seed ortholog is 88%.
Bootstrap support for H3HD31 as seed ortholog is 100%.

Group of orthologs #730. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.ramorum:116

F6UIG7              	100.00%		H3GC39              	100.00%
                    	       		H3GWQ9              	100.00%
Bootstrap support for F6UIG7 as seed ortholog is 99%.
Bootstrap support for H3GC39 as seed ortholog is 99%.
Bootstrap support for H3GWQ9 as seed ortholog is 99%.

Group of orthologs #731. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 P.ramorum:297

F6SDE2              	100.00%		H3GJV7              	100.00%
                    	       		H3GJV8              	100.00%
Bootstrap support for F6SDE2 as seed ortholog is 100%.
Bootstrap support for H3GJV7 as seed ortholog is 100%.
Bootstrap support for H3GJV8 as seed ortholog is 100%.

Group of orthologs #732. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.ramorum:297

F6Z5P6              	100.00%		H3G5E3              	100.00%
F6ZTZ7              	69.72%		
Bootstrap support for F6Z5P6 as seed ortholog is 100%.
Bootstrap support for H3G5E3 as seed ortholog is 100%.

Group of orthologs #733. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 P.ramorum:297

Q1RPZ2              	100.00%		H3G7S5              	100.00%
                    	       		H3G6L1              	94.48%
Bootstrap support for Q1RPZ2 as seed ortholog is 100%.
Bootstrap support for H3G7S5 as seed ortholog is 100%.

Group of orthologs #734. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.ramorum:297

F6SLD6              	100.00%		H3GLH0              	100.00%
Bootstrap support for F6SLD6 as seed ortholog is 92%.
Bootstrap support for H3GLH0 as seed ortholog is 100%.

Group of orthologs #735. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 P.ramorum:297

H2XVP1              	100.00%		H3GPP2              	100.00%
Bootstrap support for H2XVP1 as seed ortholog is 100%.
Bootstrap support for H3GPP2 as seed ortholog is 100%.

Group of orthologs #736. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.ramorum:296

F6PJM3              	100.00%		H3GXW5              	100.00%
                    	       		H3GXX2              	13.37%
Bootstrap support for F6PJM3 as seed ortholog is 99%.
Bootstrap support for H3GXW5 as seed ortholog is 100%.

Group of orthologs #737. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 P.ramorum:120

F6W1A6              	100.00%		H3G892              	100.00%
                    	       		H3G9C1              	47.60%
Bootstrap support for F6W1A6 as seed ortholog is 100%.
Bootstrap support for H3G892 as seed ortholog is 99%.

Group of orthologs #738. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 P.ramorum:214

F6TTI3              	100.00%		H3GBF8              	100.00%
Bootstrap support for F6TTI3 as seed ortholog is 100%.
Bootstrap support for H3GBF8 as seed ortholog is 100%.

Group of orthologs #739. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 P.ramorum:295

F6XTQ1              	100.00%		H3G569              	100.00%
Bootstrap support for F6XTQ1 as seed ortholog is 100%.
Bootstrap support for H3G569 as seed ortholog is 100%.

Group of orthologs #740. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 P.ramorum:295

F6S8S3              	100.00%		H3GMF5              	100.00%
Bootstrap support for F6S8S3 as seed ortholog is 100%.
Bootstrap support for H3GMF5 as seed ortholog is 100%.

Group of orthologs #741. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.ramorum:80

H2Y395              	100.00%		H3G5M8              	100.00%
Bootstrap support for H2Y395 as seed ortholog is 100%.
Bootstrap support for H3G5M8 as seed ortholog is 99%.

Group of orthologs #742. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.ramorum:48

F6Z9D3              	100.00%		H3GVV5              	100.00%
Bootstrap support for F6Z9D3 as seed ortholog is 89%.
Bootstrap support for H3GVV5 as seed ortholog is 94%.

Group of orthologs #743. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.ramorum:127

F7B040              	100.00%		H3H8J2              	100.00%
Bootstrap support for F7B040 as seed ortholog is 100%.
Bootstrap support for H3H8J2 as seed ortholog is 99%.

Group of orthologs #744. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 P.ramorum:166

F6SBY9              	100.00%		H3H449              	100.00%
Q2PEE5              	11.15%		
Bootstrap support for F6SBY9 as seed ortholog is 100%.
Bootstrap support for H3H449 as seed ortholog is 99%.

Group of orthologs #745. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 P.ramorum:210

F6PKA8              	100.00%		H3G723              	100.00%
Bootstrap support for F6PKA8 as seed ortholog is 100%.
Bootstrap support for H3G723 as seed ortholog is 100%.

Group of orthologs #746. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 P.ramorum:294

F6W318              	100.00%		H3GC81              	100.00%
Bootstrap support for F6W318 as seed ortholog is 100%.
Bootstrap support for H3GC81 as seed ortholog is 100%.

Group of orthologs #747. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 P.ramorum:294

F6YYW3              	100.00%		H3H0V6              	100.00%
Bootstrap support for F6YYW3 as seed ortholog is 100%.
Bootstrap support for H3H0V6 as seed ortholog is 100%.

Group of orthologs #748. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 P.ramorum:193

H2XUA5              	100.00%		H3GLL2              	100.00%
Bootstrap support for H2XUA5 as seed ortholog is 100%.
Bootstrap support for H3GLL2 as seed ortholog is 99%.

Group of orthologs #749. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 P.ramorum:293

F6VXD0              	100.00%		H3GAL6              	100.00%
Bootstrap support for F6VXD0 as seed ortholog is 100%.
Bootstrap support for H3GAL6 as seed ortholog is 100%.

Group of orthologs #750. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 P.ramorum:293

F6SM47              	100.00%		H3GJT5              	100.00%
Bootstrap support for F6SM47 as seed ortholog is 100%.
Bootstrap support for H3GJT5 as seed ortholog is 100%.

Group of orthologs #751. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 P.ramorum:293

F6XDI5              	100.00%		H3H4A6              	100.00%
Bootstrap support for F6XDI5 as seed ortholog is 100%.
Bootstrap support for H3H4A6 as seed ortholog is 100%.

Group of orthologs #752. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.ramorum:293

F7B418              	100.00%		H3GY11              	100.00%
Bootstrap support for F7B418 as seed ortholog is 97%.
Bootstrap support for H3GY11 as seed ortholog is 100%.

Group of orthologs #753. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 P.ramorum:208

F6QRJ2              	100.00%		H3GV89              	100.00%
                    	       		H3G9X5              	60.36%
Bootstrap support for F6QRJ2 as seed ortholog is 100%.
Bootstrap support for H3GV89 as seed ortholog is 100%.

Group of orthologs #754. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 P.ramorum:292

F6RK88              	100.00%		H3GBX6              	100.00%
Bootstrap support for F6RK88 as seed ortholog is 100%.
Bootstrap support for H3GBX6 as seed ortholog is 100%.

Group of orthologs #755. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 P.ramorum:136

H2XUE3              	100.00%		H3G8G2              	100.00%
Bootstrap support for H2XUE3 as seed ortholog is 100%.
Bootstrap support for H3G8G2 as seed ortholog is 100%.

Group of orthologs #756. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 P.ramorum:291

F6XVY9              	100.00%		H3H7R1              	100.00%
                    	       		H3HBJ6              	89.17%
Bootstrap support for F6XVY9 as seed ortholog is 100%.
Bootstrap support for H3H7R1 as seed ortholog is 100%.

Group of orthologs #757. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 P.ramorum:144

F6S4U2              	100.00%		H3GVP4              	100.00%
Bootstrap support for F6S4U2 as seed ortholog is 100%.
Bootstrap support for H3GVP4 as seed ortholog is 99%.

Group of orthologs #758. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 P.ramorum:290

F6Y7E9              	100.00%		H3GL87              	100.00%
Bootstrap support for F6Y7E9 as seed ortholog is 100%.
Bootstrap support for H3GL87 as seed ortholog is 100%.

Group of orthologs #759. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 P.ramorum:289

F6YK29              	100.00%		H3GTW5              	100.00%
F7A4H8              	14.00%		
Bootstrap support for F6YK29 as seed ortholog is 100%.
Bootstrap support for H3GTW5 as seed ortholog is 100%.

Group of orthologs #760. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 P.ramorum:289

F6UGC2              	100.00%		H3GMN9              	100.00%
Bootstrap support for F6UGC2 as seed ortholog is 100%.
Bootstrap support for H3GMN9 as seed ortholog is 100%.

Group of orthologs #761. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 P.ramorum:289

F6V8N9              	100.00%		H3GNL2              	100.00%
Bootstrap support for F6V8N9 as seed ortholog is 100%.
Bootstrap support for H3GNL2 as seed ortholog is 100%.

Group of orthologs #762. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 P.ramorum:158

F7A961              	100.00%		H3H5C2              	100.00%
                    	       		H3GTW8              	92.11%
                    	       		H3GJB7              	13.79%
Bootstrap support for F7A961 as seed ortholog is 28%.
Alternative seed ortholog is F6ZXD5 (8 bits away from this cluster)
Bootstrap support for H3H5C2 as seed ortholog is 99%.

Group of orthologs #763. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 P.ramorum:235

F6RKQ2              	100.00%		H3GAE9              	100.00%
Bootstrap support for F6RKQ2 as seed ortholog is 100%.
Bootstrap support for H3GAE9 as seed ortholog is 100%.

Group of orthologs #764. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 P.ramorum:288

F6WBA4              	100.00%		H3G7V7              	100.00%
Bootstrap support for F6WBA4 as seed ortholog is 100%.
Bootstrap support for H3G7V7 as seed ortholog is 100%.

Group of orthologs #765. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.ramorum:180

F6WAG8              	100.00%		H3GA11              	100.00%
Bootstrap support for F6WAG8 as seed ortholog is 100%.
Bootstrap support for H3GA11 as seed ortholog is 100%.

Group of orthologs #766. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 P.ramorum:288

F6XER0              	100.00%		H3GBV9              	100.00%
Bootstrap support for F6XER0 as seed ortholog is 100%.
Bootstrap support for H3GBV9 as seed ortholog is 100%.

Group of orthologs #767. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 P.ramorum:60

F6UAX7              	100.00%		H3GIY2              	100.00%
Bootstrap support for F6UAX7 as seed ortholog is 100%.
Bootstrap support for H3GIY2 as seed ortholog is 89%.

Group of orthologs #768. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.ramorum:28

F6RKK1              	100.00%		H3G710              	100.00%
Bootstrap support for F6RKK1 as seed ortholog is 99%.
Bootstrap support for H3G710 as seed ortholog is 79%.

Group of orthologs #769. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 P.ramorum:287

F6UCU4              	100.00%		H3G825              	100.00%
Bootstrap support for F6UCU4 as seed ortholog is 100%.
Bootstrap support for H3G825 as seed ortholog is 100%.

Group of orthologs #770. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 P.ramorum:287

F6YM02              	100.00%		H3GB03              	100.00%
Bootstrap support for F6YM02 as seed ortholog is 100%.
Bootstrap support for H3GB03 as seed ortholog is 100%.

Group of orthologs #771. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 P.ramorum:94

H2XVN3              	100.00%		H3G6B6              	100.00%
Bootstrap support for H2XVN3 as seed ortholog is 100%.
Bootstrap support for H3G6B6 as seed ortholog is 99%.

Group of orthologs #772. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 P.ramorum:286

F6U1V3              	100.00%		H3GSU4              	100.00%
Bootstrap support for F6U1V3 as seed ortholog is 100%.
Bootstrap support for H3GSU4 as seed ortholog is 100%.

Group of orthologs #773. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.ramorum:286

F7ACS2              	100.00%		H3GGZ3              	100.00%
Bootstrap support for F7ACS2 as seed ortholog is 96%.
Bootstrap support for H3GGZ3 as seed ortholog is 100%.

Group of orthologs #774. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 P.ramorum:33

H2XJK0              	100.00%		H3GHC6              	100.00%
Bootstrap support for H2XJK0 as seed ortholog is 100%.
Bootstrap support for H3GHC6 as seed ortholog is 79%.

Group of orthologs #775. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.ramorum:172

F6XWW8              	100.00%		H3H0M5              	100.00%
Bootstrap support for F6XWW8 as seed ortholog is 95%.
Bootstrap support for H3H0M5 as seed ortholog is 100%.

Group of orthologs #776. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.ramorum:286

H2XNI7              	100.00%		H3GXU5              	100.00%
Bootstrap support for H2XNI7 as seed ortholog is 100%.
Bootstrap support for H3GXU5 as seed ortholog is 100%.

Group of orthologs #777. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:141

F6T2A6              	100.00%		H3G9K1              	100.00%
F6T2C1              	16.67%		
Bootstrap support for F6T2A6 as seed ortholog is 100%.
Bootstrap support for H3G9K1 as seed ortholog is 100%.

Group of orthologs #778. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 P.ramorum:285

F6XUD5              	100.00%		H3GT37              	100.00%
F6V9F0              	36.83%		
Bootstrap support for F6XUD5 as seed ortholog is 100%.
Bootstrap support for H3GT37 as seed ortholog is 100%.

Group of orthologs #779. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 P.ramorum:126

F6Z491              	100.00%		H3G8K1              	100.00%
Bootstrap support for F6Z491 as seed ortholog is 100%.
Bootstrap support for H3G8K1 as seed ortholog is 100%.

Group of orthologs #780. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 P.ramorum:285

F6ZS66              	100.00%		H3G745              	100.00%
Bootstrap support for F6ZS66 as seed ortholog is 100%.
Bootstrap support for H3G745 as seed ortholog is 100%.

Group of orthologs #781. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 P.ramorum:285

F7B5B2              	100.00%		H3GGZ4              	100.00%
Bootstrap support for F7B5B2 as seed ortholog is 100%.
Bootstrap support for H3GGZ4 as seed ortholog is 100%.

Group of orthologs #782. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.ramorum:285

F6YZZ7              	100.00%		H3GW58              	100.00%
Bootstrap support for F6YZZ7 as seed ortholog is 79%.
Bootstrap support for H3GW58 as seed ortholog is 100%.

Group of orthologs #783. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 P.ramorum:285

F6TWQ7              	100.00%		H3HCW1              	100.00%
Bootstrap support for F6TWQ7 as seed ortholog is 99%.
Bootstrap support for H3HCW1 as seed ortholog is 100%.

Group of orthologs #784. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 P.ramorum:285

F6UG85              	100.00%		H3HDC2              	100.00%
Bootstrap support for F6UG85 as seed ortholog is 100%.
Bootstrap support for H3HDC2 as seed ortholog is 100%.

Group of orthologs #785. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 P.ramorum:178

F7BMB7              	100.00%		H3HC79              	100.00%
Bootstrap support for F7BMB7 as seed ortholog is 100%.
Bootstrap support for H3HC79 as seed ortholog is 100%.

Group of orthologs #786. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 P.ramorum:284

F6Q0S7              	100.00%		H3G601              	100.00%
Bootstrap support for F6Q0S7 as seed ortholog is 100%.
Bootstrap support for H3G601 as seed ortholog is 100%.

Group of orthologs #787. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 P.ramorum:284

F6STU7              	100.00%		H3GAP0              	100.00%
Bootstrap support for F6STU7 as seed ortholog is 100%.
Bootstrap support for H3GAP0 as seed ortholog is 100%.

Group of orthologs #788. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 P.ramorum:284

F6V6M0              	100.00%		H3GTZ8              	100.00%
Bootstrap support for F6V6M0 as seed ortholog is 100%.
Bootstrap support for H3GTZ8 as seed ortholog is 100%.

Group of orthologs #789. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.ramorum:283

F6Z6J2              	100.00%		H3GH24              	100.00%
                    	       		H3G995              	61.34%
                    	       		H3GH23              	56.02%
Bootstrap support for F6Z6J2 as seed ortholog is 100%.
Bootstrap support for H3GH24 as seed ortholog is 100%.

Group of orthologs #790. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 P.ramorum:283

F6VL61              	100.00%		H3GA05              	100.00%
F6VKS9              	22.34%		
Bootstrap support for F6VL61 as seed ortholog is 100%.
Bootstrap support for H3GA05 as seed ortholog is 100%.

Group of orthologs #791. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 P.ramorum:283

Q4H2R2              	100.00%		H3GY61              	100.00%
F6VQ10              	82.85%		
Bootstrap support for Q4H2R2 as seed ortholog is 100%.
Bootstrap support for H3GY61 as seed ortholog is 100%.

Group of orthologs #792. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 P.ramorum:283

F6VC80              	100.00%		H3GD17              	100.00%
Bootstrap support for F6VC80 as seed ortholog is 100%.
Bootstrap support for H3GD17 as seed ortholog is 100%.

Group of orthologs #793. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.ramorum:282

F6PR32              	100.00%		H3GA02              	100.00%
H2Y1Q1              	100.00%		
Q8WSS1              	100.00%		
F6SML2              	6.73%		
Bootstrap support for F6PR32 as seed ortholog is 86%.
Bootstrap support for H2Y1Q1 as seed ortholog is 83%.
Bootstrap support for Q8WSS1 as seed ortholog is 86%.
Bootstrap support for H3GA02 as seed ortholog is 100%.

Group of orthologs #794. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 P.ramorum:282

F6YNT4              	100.00%		H3GJY6              	100.00%
Bootstrap support for F6YNT4 as seed ortholog is 100%.
Bootstrap support for H3GJY6 as seed ortholog is 100%.

Group of orthologs #795. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 P.ramorum:282

H2XVD5              	100.00%		H3GNU1              	100.00%
Bootstrap support for H2XVD5 as seed ortholog is 100%.
Bootstrap support for H3GNU1 as seed ortholog is 100%.

Group of orthologs #796. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.ramorum:97

F6XT42              	100.00%		H3HE02              	100.00%
                    	       		H3H001              	63.44%
Bootstrap support for F6XT42 as seed ortholog is 99%.
Bootstrap support for H3HE02 as seed ortholog is 99%.

Group of orthologs #797. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.ramorum:194

F6ZKW1              	100.00%		H3G7J3              	100.00%
Bootstrap support for F6ZKW1 as seed ortholog is 100%.
Bootstrap support for H3G7J3 as seed ortholog is 100%.

Group of orthologs #798. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 P.ramorum:281

F6YWF1              	100.00%		H3GXC4              	100.00%
Bootstrap support for F6YWF1 as seed ortholog is 100%.
Bootstrap support for H3GXC4 as seed ortholog is 100%.

Group of orthologs #799. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:104

F6V299              	100.00%		H3HC15              	100.00%
Bootstrap support for F6V299 as seed ortholog is 99%.
Bootstrap support for H3HC15 as seed ortholog is 99%.

Group of orthologs #800. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 P.ramorum:280

F7APM6              	100.00%		H3GUQ7              	100.00%
                    	       		H3GW45              	43.94%
                    	       		H3GW46              	37.06%
                    	       		H3H7T7              	21.58%
Bootstrap support for F7APM6 as seed ortholog is 100%.
Bootstrap support for H3GUQ7 as seed ortholog is 100%.

Group of orthologs #801. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 P.ramorum:280

F6Q8V8              	100.00%		H3GAN3              	100.00%
Bootstrap support for F6Q8V8 as seed ortholog is 100%.
Bootstrap support for H3GAN3 as seed ortholog is 100%.

Group of orthologs #802. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 P.ramorum:280

F6Y0M4              	100.00%		H3GRQ7              	100.00%
Bootstrap support for F6Y0M4 as seed ortholog is 100%.
Bootstrap support for H3GRQ7 as seed ortholog is 100%.

Group of orthologs #803. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 P.ramorum:280

H2XNV5              	100.00%		H3H4U3              	100.00%
Bootstrap support for H2XNV5 as seed ortholog is 100%.
Bootstrap support for H3H4U3 as seed ortholog is 100%.

Group of orthologs #804. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 P.ramorum:279

F6QE16              	100.00%		H3GME6              	100.00%
Bootstrap support for F6QE16 as seed ortholog is 100%.
Bootstrap support for H3GME6 as seed ortholog is 100%.

Group of orthologs #805. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.ramorum:219

F7AHV7              	100.00%		H3G981              	100.00%
Bootstrap support for F7AHV7 as seed ortholog is 100%.
Bootstrap support for H3G981 as seed ortholog is 100%.

Group of orthologs #806. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 P.ramorum:279

F6QHP8              	100.00%		H3HB70              	100.00%
Bootstrap support for F6QHP8 as seed ortholog is 100%.
Bootstrap support for H3HB70 as seed ortholog is 100%.

Group of orthologs #807. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.ramorum:169

F6UX10              	100.00%		H3HDA1              	100.00%
Bootstrap support for F6UX10 as seed ortholog is 98%.
Bootstrap support for H3HDA1 as seed ortholog is 99%.

Group of orthologs #808. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 P.ramorum:279

H2XZV8              	100.00%		H3GH86              	100.00%
Bootstrap support for H2XZV8 as seed ortholog is 100%.
Bootstrap support for H3GH86 as seed ortholog is 100%.

Group of orthologs #809. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.ramorum:1

H2XNI1              	100.00%		H3G9Q7              	100.00%
F6UEZ5              	16.61%		
Bootstrap support for H2XNI1 as seed ortholog is 87%.
Bootstrap support for H3G9Q7 as seed ortholog is 63%.
Alternative seed ortholog is H3HDE6 (1 bits away from this cluster)

Group of orthologs #810. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.ramorum:123

H2XRD4              	100.00%		H3GA42              	100.00%
Bootstrap support for H2XRD4 as seed ortholog is 100%.
Bootstrap support for H3GA42 as seed ortholog is 100%.

Group of orthologs #811. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 P.ramorum:278

H2XWU7              	100.00%		H3G6M9              	100.00%
Bootstrap support for H2XWU7 as seed ortholog is 100%.
Bootstrap support for H3G6M9 as seed ortholog is 100%.

Group of orthologs #812. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 P.ramorum:38

F7B9D6              	100.00%		H3GW41              	100.00%
                    	       		H3HB65              	14.53%
                    	       		H3GIW2              	14.23%
Bootstrap support for F7B9D6 as seed ortholog is 63%.
Alternative seed ortholog is F6W6I5 (15 bits away from this cluster)
Bootstrap support for H3GW41 as seed ortholog is 84%.

Group of orthologs #813. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 P.ramorum:277

F6QS75              	100.00%		H3GKH9              	100.00%
Bootstrap support for F6QS75 as seed ortholog is 100%.
Bootstrap support for H3GKH9 as seed ortholog is 100%.

Group of orthologs #814. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 P.ramorum:80

F6Q989              	100.00%		H3GS65              	100.00%
Bootstrap support for F6Q989 as seed ortholog is 100%.
Bootstrap support for H3GS65 as seed ortholog is 91%.

Group of orthologs #815. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 P.ramorum:101

F6ZGS5              	100.00%		H3G7G2              	100.00%
Bootstrap support for F6ZGS5 as seed ortholog is 100%.
Bootstrap support for H3G7G2 as seed ortholog is 99%.

Group of orthologs #816. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.ramorum:53

H2XK60              	100.00%		H3G757              	100.00%
Bootstrap support for H2XK60 as seed ortholog is 98%.
Bootstrap support for H3G757 as seed ortholog is 92%.

Group of orthologs #817. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 P.ramorum:277

F7AMV0              	100.00%		H3GU81              	100.00%
Bootstrap support for F7AMV0 as seed ortholog is 100%.
Bootstrap support for H3GU81 as seed ortholog is 100%.

Group of orthologs #818. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 P.ramorum:143

F7BK08              	100.00%		H3GBB7              	100.00%
Bootstrap support for F7BK08 as seed ortholog is 100%.
Bootstrap support for H3GBB7 as seed ortholog is 89%.

Group of orthologs #819. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 P.ramorum:276

H2Y1I7              	100.00%		H3GKA6              	100.00%
Bootstrap support for H2Y1I7 as seed ortholog is 100%.
Bootstrap support for H3GKA6 as seed ortholog is 100%.

Group of orthologs #820. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.ramorum:146

F6XT60              	100.00%		H3G9D1              	100.00%
Bootstrap support for F6XT60 as seed ortholog is 99%.
Bootstrap support for H3G9D1 as seed ortholog is 100%.

Group of orthologs #821. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 P.ramorum:275

F7AMR5              	100.00%		H3G4X4              	100.00%
Bootstrap support for F7AMR5 as seed ortholog is 100%.
Bootstrap support for H3G4X4 as seed ortholog is 100%.

Group of orthologs #822. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 P.ramorum:274

H2Y3D5              	100.00%		H3H2X5              	100.00%
                    	       		H3GSX4              	8.35%
Bootstrap support for H2Y3D5 as seed ortholog is 100%.
Bootstrap support for H3H2X5 as seed ortholog is 100%.

Group of orthologs #823. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 P.ramorum:274

F6RTW0              	100.00%		H3GFE9              	100.00%
Bootstrap support for F6RTW0 as seed ortholog is 100%.
Bootstrap support for H3GFE9 as seed ortholog is 100%.

Group of orthologs #824. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 P.ramorum:227

F6YBW7              	100.00%		H3G7H3              	100.00%
Bootstrap support for F6YBW7 as seed ortholog is 100%.
Bootstrap support for H3G7H3 as seed ortholog is 100%.

Group of orthologs #825. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 P.ramorum:146

F6ZRB6              	100.00%		H3G9D2              	100.00%
Bootstrap support for F6ZRB6 as seed ortholog is 100%.
Bootstrap support for H3G9D2 as seed ortholog is 100%.

Group of orthologs #826. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 P.ramorum:274

F6ZIP8              	100.00%		H3GA48              	100.00%
Bootstrap support for F6ZIP8 as seed ortholog is 100%.
Bootstrap support for H3GA48 as seed ortholog is 100%.

Group of orthologs #827. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 P.ramorum:274

F6VW40              	100.00%		H3GMN5              	100.00%
Bootstrap support for F6VW40 as seed ortholog is 100%.
Bootstrap support for H3GMN5 as seed ortholog is 100%.

Group of orthologs #828. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 P.ramorum:217

F6WYU9              	100.00%		H3GS12              	100.00%
Bootstrap support for F6WYU9 as seed ortholog is 100%.
Bootstrap support for H3GS12 as seed ortholog is 99%.

Group of orthologs #829. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 P.ramorum:274

H2XVS8              	100.00%		H3GW23              	100.00%
Bootstrap support for H2XVS8 as seed ortholog is 100%.
Bootstrap support for H3GW23 as seed ortholog is 100%.

Group of orthologs #830. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 P.ramorum:274

H2XW62              	100.00%		H3GY38              	100.00%
Bootstrap support for H2XW62 as seed ortholog is 100%.
Bootstrap support for H3GY38 as seed ortholog is 100%.

Group of orthologs #831. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.ramorum:128

F7A9Y8              	100.00%		H3G737              	100.00%
Bootstrap support for F7A9Y8 as seed ortholog is 99%.
Bootstrap support for H3G737 as seed ortholog is 99%.

Group of orthologs #832. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 P.ramorum:157

F6U472              	100.00%		H3HCW2              	100.00%
Bootstrap support for F6U472 as seed ortholog is 100%.
Bootstrap support for H3HCW2 as seed ortholog is 100%.

Group of orthologs #833. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 P.ramorum:148

F6YFE4              	100.00%		H3H2A8              	100.00%
F6YP84              	100.00%		H3GG39              	100.00%
H2Y3G9              	24.55%		H3GQ58              	5.67%
Bootstrap support for F6YFE4 as seed ortholog is 100%.
Bootstrap support for F6YP84 as seed ortholog is 100%.
Bootstrap support for H3H2A8 as seed ortholog is 99%.
Bootstrap support for H3GG39 as seed ortholog is 97%.

Group of orthologs #834. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.ramorum:194

F6W2M8              	100.00%		H3GA23              	100.00%
                    	       		H3GAD0              	37.23%
Bootstrap support for F6W2M8 as seed ortholog is 100%.
Bootstrap support for H3GA23 as seed ortholog is 100%.

Group of orthologs #835. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.ramorum:152

F6PIZ2              	100.00%		H3G8V3              	100.00%
Bootstrap support for F6PIZ2 as seed ortholog is 99%.
Bootstrap support for H3G8V3 as seed ortholog is 100%.

Group of orthologs #836. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 P.ramorum:272

F6VUL9              	100.00%		H3G8T9              	100.00%
Bootstrap support for F6VUL9 as seed ortholog is 100%.
Bootstrap support for H3G8T9 as seed ortholog is 100%.

Group of orthologs #837. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 P.ramorum:272

F6U441              	100.00%		H3GR18              	100.00%
Bootstrap support for F6U441 as seed ortholog is 100%.
Bootstrap support for H3GR18 as seed ortholog is 100%.

Group of orthologs #838. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 P.ramorum:114

F6S4V6              	100.00%		H3GVQ8              	100.00%
Bootstrap support for F6S4V6 as seed ortholog is 100%.
Bootstrap support for H3GVQ8 as seed ortholog is 98%.

Group of orthologs #839. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 P.ramorum:272

H2XQ81              	100.00%		H3G5E0              	100.00%
Bootstrap support for H2XQ81 as seed ortholog is 100%.
Bootstrap support for H3G5E0 as seed ortholog is 100%.

Group of orthologs #840. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 P.ramorum:271

F6ZTX9              	100.00%		H3G6A1              	100.00%
Bootstrap support for F6ZTX9 as seed ortholog is 100%.
Bootstrap support for H3G6A1 as seed ortholog is 100%.

Group of orthologs #841. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 P.ramorum:45

Q68A28              	100.00%		H3G9V3              	100.00%
                    	       		H3G9V4              	100.00%
                    	       		H3GB90              	100.00%
                    	       		H3G661              	82.84%
                    	       		H3GB95              	36.57%
                    	       		H3G9V0              	21.64%
Bootstrap support for Q68A28 as seed ortholog is 64%.
Alternative seed ortholog is H2XU41 (9 bits away from this cluster)
Bootstrap support for H3G9V3 as seed ortholog is 95%.
Bootstrap support for H3G9V4 as seed ortholog is 95%.
Bootstrap support for H3GB90 as seed ortholog is 95%.

Group of orthologs #842. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.ramorum:38

F6VL41              	100.00%		H3GA13              	100.00%
F6YBW0              	11.80%		H3HAB9              	69.98%
Bootstrap support for F6VL41 as seed ortholog is 98%.
Bootstrap support for H3GA13 as seed ortholog is 80%.

Group of orthologs #843. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.ramorum:88

F6WVH2              	100.00%		H3GBX2              	100.00%
F6Q6W6              	58.09%		
Bootstrap support for F6WVH2 as seed ortholog is 97%.
Bootstrap support for H3GBX2 as seed ortholog is 98%.

Group of orthologs #844. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 P.ramorum:270

F6S360              	100.00%		H3GD20              	100.00%
Bootstrap support for F6S360 as seed ortholog is 100%.
Bootstrap support for H3GD20 as seed ortholog is 100%.

Group of orthologs #845. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 P.ramorum:270

F6UPC7              	100.00%		H3GAM0              	100.00%
Bootstrap support for F6UPC7 as seed ortholog is 100%.
Bootstrap support for H3GAM0 as seed ortholog is 100%.

Group of orthologs #846. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 P.ramorum:270

F7AEY7              	100.00%		H3GBK0              	100.00%
Bootstrap support for F7AEY7 as seed ortholog is 100%.
Bootstrap support for H3GBK0 as seed ortholog is 100%.

Group of orthologs #847. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 P.ramorum:270

H2XW54              	100.00%		H3GH31              	100.00%
Bootstrap support for H2XW54 as seed ortholog is 100%.
Bootstrap support for H3GH31 as seed ortholog is 100%.

Group of orthologs #848. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 P.ramorum:90

F7B2Q7              	100.00%		H3HCM2              	100.00%
Bootstrap support for F7B2Q7 as seed ortholog is 84%.
Bootstrap support for H3HCM2 as seed ortholog is 99%.

Group of orthologs #849. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 P.ramorum:269

F6TQI0              	100.00%		H3GMG3              	100.00%
F6TB46              	77.92%		H3H8Y3              	68.43%
F6UUY2              	38.30%		H3GU40              	61.92%
F6TQU2              	35.32%		H3H503              	56.10%
F6UPI1              	31.46%		H3H5G0              	45.93%
                    	       		H3GU41              	40.38%
                    	       		H3GQ89              	18.29%
Bootstrap support for F6TQI0 as seed ortholog is 100%.
Bootstrap support for H3GMG3 as seed ortholog is 100%.

Group of orthologs #850. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.ramorum:58

F6QIM1              	100.00%		H3G5V3              	100.00%
Bootstrap support for F6QIM1 as seed ortholog is 100%.
Bootstrap support for H3G5V3 as seed ortholog is 99%.

Group of orthologs #851. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 P.ramorum:49

F6R4H2              	100.00%		H3G4Z5              	100.00%
Bootstrap support for F6R4H2 as seed ortholog is 71%.
Alternative seed ortholog is F6ZSR8 (20 bits away from this cluster)
Bootstrap support for H3G4Z5 as seed ortholog is 87%.

Group of orthologs #852. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 P.ramorum:269

F6Q512              	100.00%		H3GC34              	100.00%
Bootstrap support for F6Q512 as seed ortholog is 100%.
Bootstrap support for H3GC34 as seed ortholog is 100%.

Group of orthologs #853. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.ramorum:189

F6U6L5              	100.00%		H3G9F5              	100.00%
Bootstrap support for F6U6L5 as seed ortholog is 99%.
Bootstrap support for H3G9F5 as seed ortholog is 100%.

Group of orthologs #854. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 P.ramorum:269

F6WAT8              	100.00%		H3GE00              	100.00%
Bootstrap support for F6WAT8 as seed ortholog is 100%.
Bootstrap support for H3GE00 as seed ortholog is 100%.

Group of orthologs #855. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 P.ramorum:269

F6REI3              	100.00%		H3GYD8              	100.00%
Bootstrap support for F6REI3 as seed ortholog is 100%.
Bootstrap support for H3GYD8 as seed ortholog is 100%.

Group of orthologs #856. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 P.ramorum:269

H2XPZ1              	100.00%		H3GER6              	100.00%
Bootstrap support for H2XPZ1 as seed ortholog is 100%.
Bootstrap support for H3GER6 as seed ortholog is 100%.

Group of orthologs #857. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 P.ramorum:269

H2Y0A5              	100.00%		H3G980              	100.00%
Bootstrap support for H2Y0A5 as seed ortholog is 100%.
Bootstrap support for H3G980 as seed ortholog is 100%.

Group of orthologs #858. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 P.ramorum:269

F6Z0U1              	100.00%		H3HB33              	100.00%
Bootstrap support for F6Z0U1 as seed ortholog is 100%.
Bootstrap support for H3HB33 as seed ortholog is 100%.

Group of orthologs #859. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 P.ramorum:53

H2XNC4              	100.00%		H3H673              	100.00%
H2XUW8              	64.61%		H3H803              	21.18%
H2XQV4              	59.89%		H3H6R7              	18.79%
Bootstrap support for H2XNC4 as seed ortholog is 100%.
Bootstrap support for H3H673 as seed ortholog is 80%.

Group of orthologs #860. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 P.ramorum:268

F6XXF0              	100.00%		H3H2J7              	100.00%
Bootstrap support for F6XXF0 as seed ortholog is 100%.
Bootstrap support for H3H2J7 as seed ortholog is 100%.

Group of orthologs #861. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 P.ramorum:267

F6U2U3              	100.00%		H3GA45              	100.00%
Bootstrap support for F6U2U3 as seed ortholog is 100%.
Bootstrap support for H3GA45 as seed ortholog is 100%.

Group of orthologs #862. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:267

F6Y7P7              	100.00%		H3G5V4              	100.00%
Bootstrap support for F6Y7P7 as seed ortholog is 99%.
Bootstrap support for H3G5V4 as seed ortholog is 100%.

Group of orthologs #863. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 P.ramorum:267

F6X2V0              	100.00%		H3GS71              	100.00%
Bootstrap support for F6X2V0 as seed ortholog is 100%.
Bootstrap support for H3GS71 as seed ortholog is 100%.

Group of orthologs #864. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 P.ramorum:267

H2XNG1              	100.00%		H3GKY3              	100.00%
Bootstrap support for H2XNG1 as seed ortholog is 100%.
Bootstrap support for H3GKY3 as seed ortholog is 100%.

Group of orthologs #865. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 P.ramorum:266

F6SYV7              	100.00%		H3GM85              	100.00%
Bootstrap support for F6SYV7 as seed ortholog is 100%.
Bootstrap support for H3GM85 as seed ortholog is 100%.

Group of orthologs #866. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 P.ramorum:265

H2XXR3              	100.00%		H3H4R1              	100.00%
F6ZQY6              	16.67%		
Bootstrap support for H2XXR3 as seed ortholog is 99%.
Bootstrap support for H3H4R1 as seed ortholog is 100%.

Group of orthologs #867. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 P.ramorum:98

F6XJF3              	100.00%		H3GVK8              	100.00%
Bootstrap support for F6XJF3 as seed ortholog is 100%.
Bootstrap support for H3GVK8 as seed ortholog is 98%.

Group of orthologs #868. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 P.ramorum:265

F6XVD3              	100.00%		H3GWM1              	100.00%
Bootstrap support for F6XVD3 as seed ortholog is 100%.
Bootstrap support for H3GWM1 as seed ortholog is 100%.

Group of orthologs #869. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.ramorum:117

F6R3W0              	100.00%		H3HDG0              	100.00%
Bootstrap support for F6R3W0 as seed ortholog is 100%.
Bootstrap support for H3HDG0 as seed ortholog is 99%.

Group of orthologs #870. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 P.ramorum:265

H2XRS3              	100.00%		H3GN45              	100.00%
Bootstrap support for H2XRS3 as seed ortholog is 100%.
Bootstrap support for H3GN45 as seed ortholog is 100%.

Group of orthologs #871. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 P.ramorum:40

F6UAF0              	100.00%		H3G8M8              	100.00%
                    	       		H3G772              	6.45%
Bootstrap support for F6UAF0 as seed ortholog is 77%.
Bootstrap support for H3G8M8 as seed ortholog is 96%.

Group of orthologs #872. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 P.ramorum:264

F6TJ64              	100.00%		H3G8F2              	100.00%
Bootstrap support for F6TJ64 as seed ortholog is 100%.
Bootstrap support for H3G8F2 as seed ortholog is 100%.

Group of orthologs #873. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 P.ramorum:264

F6YEQ8              	100.00%		H3GLR2              	100.00%
Bootstrap support for F6YEQ8 as seed ortholog is 100%.
Bootstrap support for H3GLR2 as seed ortholog is 100%.

Group of orthologs #874. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.ramorum:264

F7BML6              	100.00%		H3GU85              	100.00%
Bootstrap support for F7BML6 as seed ortholog is 99%.
Bootstrap support for H3GU85 as seed ortholog is 100%.

Group of orthologs #875. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 P.ramorum:263

F6Q4K7              	100.00%		H3G699              	100.00%
Bootstrap support for F6Q4K7 as seed ortholog is 100%.
Bootstrap support for H3G699 as seed ortholog is 100%.

Group of orthologs #876. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 P.ramorum:139

F6YI64              	100.00%		H3G8I4              	100.00%
Bootstrap support for F6YI64 as seed ortholog is 100%.
Bootstrap support for H3G8I4 as seed ortholog is 100%.

Group of orthologs #877. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.ramorum:262

F6T8Y3              	100.00%		H3H3U8              	100.00%
                    	       		H3GTY4              	16.84%
Bootstrap support for F6T8Y3 as seed ortholog is 99%.
Bootstrap support for H3H3U8 as seed ortholog is 100%.

Group of orthologs #878. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 P.ramorum:262

F6SS61              	100.00%		H3G9I2              	100.00%
Bootstrap support for F6SS61 as seed ortholog is 100%.
Bootstrap support for H3G9I2 as seed ortholog is 100%.

Group of orthologs #879. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 P.ramorum:262

F6U397              	100.00%		H3G9P2              	100.00%
Bootstrap support for F6U397 as seed ortholog is 100%.
Bootstrap support for H3G9P2 as seed ortholog is 100%.

Group of orthologs #880. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 P.ramorum:262

F6TQ12              	100.00%		H3GM34              	100.00%
Bootstrap support for F6TQ12 as seed ortholog is 100%.
Bootstrap support for H3GM34 as seed ortholog is 100%.

Group of orthologs #881. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 P.ramorum:262

F7AI93              	100.00%		H3GGH2              	100.00%
Bootstrap support for F7AI93 as seed ortholog is 100%.
Bootstrap support for H3GGH2 as seed ortholog is 100%.

Group of orthologs #882. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 P.ramorum:262

F7AFD2              	100.00%		H3GGU9              	100.00%
Bootstrap support for F7AFD2 as seed ortholog is 100%.
Bootstrap support for H3GGU9 as seed ortholog is 100%.

Group of orthologs #883. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 P.ramorum:262

H2XY27              	100.00%		H3G7J2              	100.00%
Bootstrap support for H2XY27 as seed ortholog is 100%.
Bootstrap support for H3G7J2 as seed ortholog is 100%.

Group of orthologs #884. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 P.ramorum:262

F6ZJZ6              	100.00%		H3HD56              	100.00%
Bootstrap support for F6ZJZ6 as seed ortholog is 100%.
Bootstrap support for H3HD56 as seed ortholog is 100%.

Group of orthologs #885. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 P.ramorum:261

F6YD53              	100.00%		H3G8Q1              	100.00%
                    	       		H3G8Q2              	79.17%
                    	       		H3G9N4              	35.65%
                    	       		H3GBA6              	35.19%
                    	       		H3GCX4              	34.49%
                    	       		H3G8A2              	34.03%
                    	       		H3G6L6              	33.80%
                    	       		H3G6L8              	33.33%
                    	       		H3G6S3              	32.87%
                    	       		H3G6U7              	31.71%
                    	       		H3GA92              	31.48%
                    	       		H3G6L9              	31.25%
                    	       		H3GA91              	31.25%
                    	       		H3GCW9              	31.02%
                    	       		H3GCX6              	29.63%
                    	       		H3G9S3              	29.40%
                    	       		H3GA93              	26.85%
                    	       		H3GCW8              	25.23%
                    	       		H3GYJ8              	25.00%
                    	       		H3GCX7              	23.61%
                    	       		H3G864              	23.15%
Bootstrap support for F6YD53 as seed ortholog is 100%.
Bootstrap support for H3G8Q1 as seed ortholog is 100%.

Group of orthologs #886. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 P.ramorum:261

F6UIA2              	100.00%		H3GQP8              	100.00%
Bootstrap support for F6UIA2 as seed ortholog is 99%.
Bootstrap support for H3GQP8 as seed ortholog is 100%.

Group of orthologs #887. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 P.ramorum:261

F6VEI9              	100.00%		H3H4U2              	100.00%
Bootstrap support for F6VEI9 as seed ortholog is 100%.
Bootstrap support for H3H4U2 as seed ortholog is 100%.

Group of orthologs #888. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.ramorum:56

F6TVX8              	100.00%		H3G9G5              	100.00%
F6YRW6              	9.54%		H3GAV1              	54.00%
Bootstrap support for F6TVX8 as seed ortholog is 99%.
Bootstrap support for H3G9G5 as seed ortholog is 90%.

Group of orthologs #889. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 P.ramorum:87

F6R5L0              	100.00%		H3GAR4              	100.00%
F6TEA0              	5.60%		
Bootstrap support for F6R5L0 as seed ortholog is 100%.
Bootstrap support for H3GAR4 as seed ortholog is 99%.

Group of orthologs #890. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 P.ramorum:260

F6QID5              	100.00%		H3GEU2              	100.00%
Bootstrap support for F6QID5 as seed ortholog is 100%.
Bootstrap support for H3GEU2 as seed ortholog is 100%.

Group of orthologs #891. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 P.ramorum:260

F6YWB6              	100.00%		H3GEK8              	100.00%
Bootstrap support for F6YWB6 as seed ortholog is 100%.
Bootstrap support for H3GEK8 as seed ortholog is 100%.

Group of orthologs #892. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 P.ramorum:18

F7BAT7              	100.00%		H3G994              	100.00%
Bootstrap support for F7BAT7 as seed ortholog is 100%.
Bootstrap support for H3G994 as seed ortholog is 75%.

Group of orthologs #893. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 P.ramorum:260

F6WBE1              	100.00%		H3H115              	100.00%
Bootstrap support for F6WBE1 as seed ortholog is 100%.
Bootstrap support for H3H115 as seed ortholog is 100%.

Group of orthologs #894. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.ramorum:140

F6XBY1              	100.00%		H3HB29              	100.00%
Bootstrap support for F6XBY1 as seed ortholog is 99%.
Bootstrap support for H3HB29 as seed ortholog is 99%.

Group of orthologs #895. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 P.ramorum:209

F6U9X5              	100.00%		H3G5N0              	100.00%
Bootstrap support for F6U9X5 as seed ortholog is 100%.
Bootstrap support for H3G5N0 as seed ortholog is 100%.

Group of orthologs #896. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 P.ramorum:259

F7BNW5              	100.00%		H3G913              	100.00%
Bootstrap support for F7BNW5 as seed ortholog is 100%.
Bootstrap support for H3G913 as seed ortholog is 100%.

Group of orthologs #897. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 P.ramorum:205

F6YLQ9              	100.00%		H3GJ79              	100.00%
Bootstrap support for F6YLQ9 as seed ortholog is 100%.
Bootstrap support for H3GJ79 as seed ortholog is 99%.

Group of orthologs #898. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 P.ramorum:259

F6Z2X4              	100.00%		H3GWV6              	100.00%
Bootstrap support for F6Z2X4 as seed ortholog is 100%.
Bootstrap support for H3GWV6 as seed ortholog is 100%.

Group of orthologs #899. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 P.ramorum:258

C4B8W8              	100.00%		H3GFT4              	100.00%
Bootstrap support for C4B8W8 as seed ortholog is 100%.
Bootstrap support for H3GFT4 as seed ortholog is 100%.

Group of orthologs #900. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 P.ramorum:258

F6T2R5              	100.00%		H3GGW8              	100.00%
Bootstrap support for F6T2R5 as seed ortholog is 100%.
Bootstrap support for H3GGW8 as seed ortholog is 100%.

Group of orthologs #901. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 P.ramorum:80

F6WNH9              	100.00%		H3G969              	100.00%
Bootstrap support for F6WNH9 as seed ortholog is 74%.
Alternative seed ortholog is F6X3P0 (15 bits away from this cluster)
Bootstrap support for H3G969 as seed ortholog is 99%.

Group of orthologs #902. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 P.ramorum:258

F6TMN3              	100.00%		H3GKZ8              	100.00%
Bootstrap support for F6TMN3 as seed ortholog is 100%.
Bootstrap support for H3GKZ8 as seed ortholog is 100%.

Group of orthologs #903. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 P.ramorum:258

F7A1S8              	100.00%		H3G855              	100.00%
Bootstrap support for F7A1S8 as seed ortholog is 100%.
Bootstrap support for H3G855 as seed ortholog is 100%.

Group of orthologs #904. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 P.ramorum:3

F7BKD9              	100.00%		H3G7C8              	100.00%
Bootstrap support for F7BKD9 as seed ortholog is 100%.
Bootstrap support for H3G7C8 as seed ortholog is 52%.
Alternative seed ortholog is H3G8K8 (3 bits away from this cluster)

Group of orthologs #905. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 P.ramorum:258

F6UJD6              	100.00%		H3GSJ6              	100.00%
Bootstrap support for F6UJD6 as seed ortholog is 100%.
Bootstrap support for H3GSJ6 as seed ortholog is 100%.

Group of orthologs #906. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 P.ramorum:85

F6V6S8              	100.00%		H3G7G0              	100.00%
Bootstrap support for F6V6S8 as seed ortholog is 100%.
Bootstrap support for H3G7G0 as seed ortholog is 99%.

Group of orthologs #907. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.ramorum:8

F6WQV1              	100.00%		H3G5R6              	100.00%
Bootstrap support for F6WQV1 as seed ortholog is 80%.
Bootstrap support for H3G5R6 as seed ortholog is 53%.
Alternative seed ortholog is H3G7G7 (8 bits away from this cluster)

Group of orthologs #908. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 P.ramorum:257

F7ATS3              	100.00%		H3G7C2              	100.00%
Bootstrap support for F7ATS3 as seed ortholog is 100%.
Bootstrap support for H3G7C2 as seed ortholog is 100%.

Group of orthologs #909. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.ramorum:257

F6T2X1              	100.00%		H3GZ38              	100.00%
Bootstrap support for F6T2X1 as seed ortholog is 99%.
Bootstrap support for H3GZ38 as seed ortholog is 100%.

Group of orthologs #910. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 P.ramorum:256

F6SNL0              	100.00%		H3G8C7              	100.00%
Bootstrap support for F6SNL0 as seed ortholog is 100%.
Bootstrap support for H3G8C7 as seed ortholog is 100%.

Group of orthologs #911. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 P.ramorum:193

F6TFD0              	100.00%		H3GAF7              	100.00%
Bootstrap support for F6TFD0 as seed ortholog is 100%.
Bootstrap support for H3GAF7 as seed ortholog is 100%.

Group of orthologs #912. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.ramorum:97

F7AFR6              	100.00%		H3G867              	100.00%
Bootstrap support for F7AFR6 as seed ortholog is 99%.
Bootstrap support for H3G867 as seed ortholog is 97%.

Group of orthologs #913. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 P.ramorum:211

H2XYT3              	100.00%		H3G8D5              	100.00%
Bootstrap support for H2XYT3 as seed ortholog is 100%.
Bootstrap support for H3G8D5 as seed ortholog is 100%.

Group of orthologs #914. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 P.ramorum:255

F6S6A5              	100.00%		H3GB48              	100.00%
                    	       		H3H7S5              	23.81%
Bootstrap support for F6S6A5 as seed ortholog is 100%.
Bootstrap support for H3GB48 as seed ortholog is 100%.

Group of orthologs #915. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.ramorum:2

H2XK16              	100.00%		H3G880              	100.00%
F7AHT0              	80.00%		
Bootstrap support for H2XK16 as seed ortholog is 100%.
Bootstrap support for H3G880 as seed ortholog is 55%.
Alternative seed ortholog is H3G9N3 (2 bits away from this cluster)

Group of orthologs #916. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 P.ramorum:151

F6RUQ3              	100.00%		H3G9M2              	100.00%
Bootstrap support for F6RUQ3 as seed ortholog is 100%.
Bootstrap support for H3G9M2 as seed ortholog is 99%.

Group of orthologs #917. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 P.ramorum:255

F6U019              	100.00%		H3G8Q0              	100.00%
Bootstrap support for F6U019 as seed ortholog is 100%.
Bootstrap support for H3G8Q0 as seed ortholog is 100%.

Group of orthologs #918. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.ramorum:186

F6W1C5              	100.00%		H3G7W6              	100.00%
Bootstrap support for F6W1C5 as seed ortholog is 100%.
Bootstrap support for H3G7W6 as seed ortholog is 100%.

Group of orthologs #919. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 P.ramorum:255

F6TIM2              	100.00%		H3GV05              	100.00%
Bootstrap support for F6TIM2 as seed ortholog is 100%.
Bootstrap support for H3GV05 as seed ortholog is 100%.

Group of orthologs #920. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 P.ramorum:196

F6VKI2              	100.00%		H3HCX5              	100.00%
Bootstrap support for F6VKI2 as seed ortholog is 100%.
Bootstrap support for H3HCX5 as seed ortholog is 99%.

Group of orthologs #921. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 P.ramorum:254

F6T9R1              	100.00%		H3G7S0              	100.00%
Bootstrap support for F6T9R1 as seed ortholog is 100%.
Bootstrap support for H3G7S0 as seed ortholog is 100%.

Group of orthologs #922. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 P.ramorum:254

H2XRW4              	100.00%		H3G8P0              	100.00%
Bootstrap support for H2XRW4 as seed ortholog is 100%.
Bootstrap support for H3G8P0 as seed ortholog is 100%.

Group of orthologs #923. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.ramorum:11

F6Y403              	100.00%		H3GJ24              	100.00%
H2XPY5              	12.97%		
Bootstrap support for F6Y403 as seed ortholog is 99%.
Bootstrap support for H3GJ24 as seed ortholog is 40%.
Alternative seed ortholog is H3GG98 (11 bits away from this cluster)

Group of orthologs #924. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.ramorum:131

F6WTG3              	100.00%		H3GY92              	100.00%
F6TIY7              	10.10%		
Bootstrap support for F6WTG3 as seed ortholog is 99%.
Bootstrap support for H3GY92 as seed ortholog is 100%.

Group of orthologs #925. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 P.ramorum:120

F6SZ54              	100.00%		H3GD85              	100.00%
Bootstrap support for F6SZ54 as seed ortholog is 99%.
Bootstrap support for H3GD85 as seed ortholog is 99%.

Group of orthologs #926. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.ramorum:253

F6T7E5              	100.00%		H3GGE2              	100.00%
Bootstrap support for F6T7E5 as seed ortholog is 100%.
Bootstrap support for H3GGE2 as seed ortholog is 100%.

Group of orthologs #927. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.ramorum:253

F7B4P8              	100.00%		H3G797              	100.00%
Bootstrap support for F7B4P8 as seed ortholog is 100%.
Bootstrap support for H3G797 as seed ortholog is 100%.

Group of orthologs #928. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.ramorum:253

F6QS20              	100.00%		H3GZU7              	100.00%
Bootstrap support for F6QS20 as seed ortholog is 100%.
Bootstrap support for H3GZU7 as seed ortholog is 100%.

Group of orthologs #929. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.ramorum:253

H2XPK8              	100.00%		H3G6P0              	100.00%
Bootstrap support for H2XPK8 as seed ortholog is 100%.
Bootstrap support for H3G6P0 as seed ortholog is 100%.

Group of orthologs #930. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.ramorum:253

H2XVQ9              	100.00%		H3G8V6              	100.00%
Bootstrap support for H2XVQ9 as seed ortholog is 100%.
Bootstrap support for H3G8V6 as seed ortholog is 100%.

Group of orthologs #931. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.ramorum:253

F6VKZ4              	100.00%		H3HCF7              	100.00%
Bootstrap support for F6VKZ4 as seed ortholog is 100%.
Bootstrap support for H3HCF7 as seed ortholog is 100%.

Group of orthologs #932. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.ramorum:252

H2XR44              	100.00%		H3GJP0              	100.00%
                    	       		H3GJN4              	50.73%
                    	       		H3GJN5              	50.24%
                    	       		H3GJN3              	49.11%
                    	       		H3G906              	43.74%
                    	       		H3GMN4              	9.59%
Bootstrap support for H2XR44 as seed ortholog is 86%.
Bootstrap support for H3GJP0 as seed ortholog is 100%.

Group of orthologs #933. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 P.ramorum:207

F7A955              	100.00%		H3G8A4              	100.00%
Bootstrap support for F7A955 as seed ortholog is 100%.
Bootstrap support for H3G8A4 as seed ortholog is 100%.

Group of orthologs #934. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 P.ramorum:252

F6QY42              	100.00%		H3H5F6              	100.00%
Bootstrap support for F6QY42 as seed ortholog is 100%.
Bootstrap support for H3H5F6 as seed ortholog is 100%.

Group of orthologs #935. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 P.ramorum:110

F6W0S4              	100.00%		H3GVU0              	100.00%
Bootstrap support for F6W0S4 as seed ortholog is 91%.
Bootstrap support for H3GVU0 as seed ortholog is 99%.

Group of orthologs #936. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 P.ramorum:252

H2XZ45              	100.00%		H3GA29              	100.00%
Bootstrap support for H2XZ45 as seed ortholog is 100%.
Bootstrap support for H3GA29 as seed ortholog is 100%.

Group of orthologs #937. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 P.ramorum:252

H2XVD0              	100.00%		H3HBA5              	100.00%
Bootstrap support for H2XVD0 as seed ortholog is 100%.
Bootstrap support for H3HBA5 as seed ortholog is 100%.

Group of orthologs #938. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 P.ramorum:251

F6WYT3              	100.00%		H3GI54              	100.00%
H2XRA0              	17.43%		
Bootstrap support for F6WYT3 as seed ortholog is 100%.
Bootstrap support for H3GI54 as seed ortholog is 100%.

Group of orthologs #939. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 P.ramorum:251

H2Y3C6              	100.00%		H3HAZ4              	100.00%
Bootstrap support for H2Y3C6 as seed ortholog is 100%.
Bootstrap support for H3HAZ4 as seed ortholog is 100%.

Group of orthologs #940. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 P.ramorum:250

F6RID7              	100.00%		H3G9A8              	100.00%
                    	       		H3G8F9              	53.72%
Bootstrap support for F6RID7 as seed ortholog is 100%.
Bootstrap support for H3G9A8 as seed ortholog is 100%.

Group of orthologs #941. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 P.ramorum:250

F6PM75              	100.00%		H3GAD8              	100.00%
Bootstrap support for F6PM75 as seed ortholog is 100%.
Bootstrap support for H3GAD8 as seed ortholog is 100%.

Group of orthologs #942. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.ramorum:115

F6S6V5              	100.00%		H3G9T0              	100.00%
Bootstrap support for F6S6V5 as seed ortholog is 99%.
Bootstrap support for H3G9T0 as seed ortholog is 100%.

Group of orthologs #943. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.ramorum:191

F6VQ02              	100.00%		H3G6Y5              	100.00%
Bootstrap support for F6VQ02 as seed ortholog is 100%.
Bootstrap support for H3G6Y5 as seed ortholog is 100%.

Group of orthologs #944. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 P.ramorum:250

F6XWN6              	100.00%		H3G7M3              	100.00%
Bootstrap support for F6XWN6 as seed ortholog is 100%.
Bootstrap support for H3G7M3 as seed ortholog is 100%.

Group of orthologs #945. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 P.ramorum:250

F6TXN5              	100.00%		H3H3M7              	100.00%
Bootstrap support for F6TXN5 as seed ortholog is 100%.
Bootstrap support for H3H3M7 as seed ortholog is 100%.

Group of orthologs #946. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 P.ramorum:250

H2XYL3              	100.00%		H3G7D8              	100.00%
Bootstrap support for H2XYL3 as seed ortholog is 100%.
Bootstrap support for H3G7D8 as seed ortholog is 100%.

Group of orthologs #947. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 P.ramorum:250

F6YSX7              	100.00%		H3GV90              	100.00%
Bootstrap support for F6YSX7 as seed ortholog is 100%.
Bootstrap support for H3GV90 as seed ortholog is 100%.

Group of orthologs #948. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 P.ramorum:199

F7AQC2              	100.00%		H3GDW2              	100.00%
F7A6E1              	27.78%		H3GFL3              	17.31%
H2Y1L4              	20.19%		H3GXW0              	16.12%
F6YP51              	14.74%		H3GXV6              	12.09%
F6XYD9              	14.64%		H3GXV8              	11.81%
F6XYT3              	10.47%		H3GQA0              	10.44%
Bootstrap support for F7AQC2 as seed ortholog is 100%.
Bootstrap support for H3GDW2 as seed ortholog is 100%.

Group of orthologs #949. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 P.ramorum:249

F6RJ65              	100.00%		H3G6F5              	100.00%
Bootstrap support for F6RJ65 as seed ortholog is 100%.
Bootstrap support for H3G6F5 as seed ortholog is 100%.

Group of orthologs #950. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.ramorum:142

F6VKA0              	100.00%		H3GSS3              	100.00%
Bootstrap support for F6VKA0 as seed ortholog is 99%.
Bootstrap support for H3GSS3 as seed ortholog is 99%.

Group of orthologs #951. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.ramorum:179

F6Y011              	100.00%		H3G9U2              	100.00%
                    	       		H3GUI8              	31.78%
Bootstrap support for F6Y011 as seed ortholog is 100%.
Bootstrap support for H3G9U2 as seed ortholog is 100%.

Group of orthologs #952. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 P.ramorum:248

F6UP98              	100.00%		H3GKQ0              	100.00%
                    	       		H3HA78              	79.33%
Bootstrap support for F6UP98 as seed ortholog is 100%.
Bootstrap support for H3GKQ0 as seed ortholog is 100%.

Group of orthologs #953. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 P.ramorum:248

F6WRV9              	100.00%		H3GHG7              	100.00%
F6YHL8              	38.33%		
Bootstrap support for F6WRV9 as seed ortholog is 100%.
Bootstrap support for H3GHG7 as seed ortholog is 100%.

Group of orthologs #954. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:48

F6S1S7              	100.00%		H3G9M6              	100.00%
Bootstrap support for F6S1S7 as seed ortholog is 99%.
Bootstrap support for H3G9M6 as seed ortholog is 99%.

Group of orthologs #955. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 P.ramorum:170

F6VEB2              	100.00%		H3G614              	100.00%
Bootstrap support for F6VEB2 as seed ortholog is 100%.
Bootstrap support for H3G614 as seed ortholog is 100%.

Group of orthologs #956. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 P.ramorum:248

F6TBE2              	100.00%		H3GTT7              	100.00%
Bootstrap support for F6TBE2 as seed ortholog is 100%.
Bootstrap support for H3GTT7 as seed ortholog is 100%.

Group of orthologs #957. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 P.ramorum:248

F6WPY5              	100.00%		H3GSP4              	100.00%
Bootstrap support for F6WPY5 as seed ortholog is 100%.
Bootstrap support for H3GSP4 as seed ortholog is 100%.

Group of orthologs #958. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 P.ramorum:247

F6PPC0              	100.00%		H3GFJ2              	100.00%
                    	       		H3G8J1              	77.50%
Bootstrap support for F6PPC0 as seed ortholog is 99%.
Bootstrap support for H3GFJ2 as seed ortholog is 100%.

Group of orthologs #959. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 P.ramorum:247

F6SHZ7              	100.00%		H3G9D8              	100.00%
Bootstrap support for F6SHZ7 as seed ortholog is 100%.
Bootstrap support for H3G9D8 as seed ortholog is 100%.

Group of orthologs #960. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.ramorum:132

F6PH64              	100.00%		H3GNQ4              	100.00%
Bootstrap support for F6PH64 as seed ortholog is 99%.
Bootstrap support for H3GNQ4 as seed ortholog is 99%.

Group of orthologs #961. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.ramorum:138

F6Z241              	100.00%		H3GCD2              	100.00%
Bootstrap support for F6Z241 as seed ortholog is 100%.
Bootstrap support for H3GCD2 as seed ortholog is 100%.

Group of orthologs #962. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 P.ramorum:247

H2XX92              	100.00%		H3G702              	100.00%
Bootstrap support for H2XX92 as seed ortholog is 100%.
Bootstrap support for H3G702 as seed ortholog is 100%.

Group of orthologs #963. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 P.ramorum:247

F6ZN43              	100.00%		H3GQY6              	100.00%
Bootstrap support for F6ZN43 as seed ortholog is 100%.
Bootstrap support for H3GQY6 as seed ortholog is 100%.

Group of orthologs #964. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 P.ramorum:21

F6Y0T9              	100.00%		H3GU84              	100.00%
Bootstrap support for F6Y0T9 as seed ortholog is 100%.
Bootstrap support for H3GU84 as seed ortholog is 70%.
Alternative seed ortholog is H3GPS7 (21 bits away from this cluster)

Group of orthologs #965. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 P.ramorum:75

H2XXL3              	100.00%		H3GPD4              	100.00%
Bootstrap support for H2XXL3 as seed ortholog is 100%.
Bootstrap support for H3GPD4 as seed ortholog is 99%.

Group of orthologs #966. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 P.ramorum:244

F6XBT4              	100.00%		H3G5G6              	100.00%
Bootstrap support for F6XBT4 as seed ortholog is 100%.
Bootstrap support for H3G5G6 as seed ortholog is 100%.

Group of orthologs #967. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 P.ramorum:196

F6ZUD0              	100.00%		H3G642              	100.00%
Bootstrap support for F6ZUD0 as seed ortholog is 100%.
Bootstrap support for H3G642 as seed ortholog is 100%.

Group of orthologs #968. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 P.ramorum:244

F6S0S0              	100.00%		H3GRS6              	100.00%
Bootstrap support for F6S0S0 as seed ortholog is 100%.
Bootstrap support for H3GRS6 as seed ortholog is 100%.

Group of orthologs #969. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 P.ramorum:197

F7ASJ4              	100.00%		H3GPC6              	100.00%
Bootstrap support for F7ASJ4 as seed ortholog is 100%.
Bootstrap support for H3GPC6 as seed ortholog is 100%.

Group of orthologs #970. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 P.ramorum:244

H2XTB6              	100.00%		H3HCB3              	100.00%
Bootstrap support for H2XTB6 as seed ortholog is 100%.
Bootstrap support for H3HCB3 as seed ortholog is 100%.

Group of orthologs #971. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 P.ramorum:187

F6RC25              	100.00%		H3G5S7              	100.00%
Bootstrap support for F6RC25 as seed ortholog is 100%.
Bootstrap support for H3G5S7 as seed ortholog is 100%.

Group of orthologs #972. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 P.ramorum:105

F6PHN1              	100.00%		H3GCS4              	100.00%
Bootstrap support for F6PHN1 as seed ortholog is 100%.
Bootstrap support for H3GCS4 as seed ortholog is 95%.

Group of orthologs #973. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 P.ramorum:243

F6ZC01              	100.00%		H3G722              	100.00%
Bootstrap support for F6ZC01 as seed ortholog is 100%.
Bootstrap support for H3G722 as seed ortholog is 100%.

Group of orthologs #974. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 P.ramorum:243

F6Y7V1              	100.00%		H3H1L7              	100.00%
Bootstrap support for F6Y7V1 as seed ortholog is 100%.
Bootstrap support for H3H1L7 as seed ortholog is 100%.

Group of orthologs #975. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 P.ramorum:243

H2XJG6              	100.00%		H3HDK0              	100.00%
Bootstrap support for H2XJG6 as seed ortholog is 100%.
Bootstrap support for H3HDK0 as seed ortholog is 100%.

Group of orthologs #976. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:135

F7A7A0              	100.00%		H3G4Z8              	100.00%
                    	       		H3GAI8              	88.86%
                    	       		H3GAI7              	52.49%
Bootstrap support for F7A7A0 as seed ortholog is 99%.
Bootstrap support for H3G4Z8 as seed ortholog is 99%.

Group of orthologs #977. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 P.ramorum:242

F6QWP6              	100.00%		H3GGV7              	100.00%
                    	       		H3G533              	34.72%
Bootstrap support for F6QWP6 as seed ortholog is 100%.
Bootstrap support for H3GGV7 as seed ortholog is 100%.

Group of orthologs #978. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 P.ramorum:242

F6TBF9              	100.00%		H3GNM0              	100.00%
Bootstrap support for F6TBF9 as seed ortholog is 100%.
Bootstrap support for H3GNM0 as seed ortholog is 100%.

Group of orthologs #979. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 P.ramorum:242

F6XVH7              	100.00%		H3GS31              	100.00%
Bootstrap support for F6XVH7 as seed ortholog is 100%.
Bootstrap support for H3GS31 as seed ortholog is 100%.

Group of orthologs #980. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 P.ramorum:242

F6YY79              	100.00%		H3GV81              	100.00%
Bootstrap support for F6YY79 as seed ortholog is 100%.
Bootstrap support for H3GV81 as seed ortholog is 100%.

Group of orthologs #981. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 P.ramorum:242

F7B670              	100.00%		H3GR01              	100.00%
Bootstrap support for F7B670 as seed ortholog is 100%.
Bootstrap support for H3GR01 as seed ortholog is 100%.

Group of orthologs #982. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 P.ramorum:242

F6TVY6              	100.00%		H3HB69              	100.00%
Bootstrap support for F6TVY6 as seed ortholog is 100%.
Bootstrap support for H3HB69 as seed ortholog is 100%.

Group of orthologs #983. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 P.ramorum:242

F7BBQ0              	100.00%		H3HBD8              	100.00%
Bootstrap support for F7BBQ0 as seed ortholog is 100%.
Bootstrap support for H3HBD8 as seed ortholog is 100%.

Group of orthologs #984. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 P.ramorum:175

H2XZ35              	100.00%		H3GWT2              	100.00%
Bootstrap support for H2XZ35 as seed ortholog is 99%.
Bootstrap support for H3GWT2 as seed ortholog is 99%.

Group of orthologs #985. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 P.ramorum:241

F6QWW6              	100.00%		H3GAS4              	100.00%
Bootstrap support for F6QWW6 as seed ortholog is 100%.
Bootstrap support for H3GAS4 as seed ortholog is 100%.

Group of orthologs #986. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 P.ramorum:241

F7B5Q2              	100.00%		H3GGX4              	100.00%
Bootstrap support for F7B5Q2 as seed ortholog is 100%.
Bootstrap support for H3GGX4 as seed ortholog is 100%.

Group of orthologs #987. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 P.ramorum:241

F7BBJ6              	100.00%		H3GJC5              	100.00%
Bootstrap support for F7BBJ6 as seed ortholog is 100%.
Bootstrap support for H3GJC5 as seed ortholog is 100%.

Group of orthologs #988. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.ramorum:240

H2XT98              	100.00%		H3GER8              	100.00%
Bootstrap support for H2XT98 as seed ortholog is 100%.
Bootstrap support for H3GER8 as seed ortholog is 100%.

Group of orthologs #989. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.ramorum:240

F6Y444              	100.00%		H3H177              	100.00%
Bootstrap support for F6Y444 as seed ortholog is 100%.
Bootstrap support for H3H177 as seed ortholog is 100%.

Group of orthologs #990. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.ramorum:240

H2XUK5              	100.00%		H3GMD4              	100.00%
Bootstrap support for H2XUK5 as seed ortholog is 100%.
Bootstrap support for H3GMD4 as seed ortholog is 100%.

Group of orthologs #991. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 P.ramorum:240

H2XW76              	100.00%		H3GXH4              	100.00%
Bootstrap support for H2XW76 as seed ortholog is 99%.
Bootstrap support for H3GXH4 as seed ortholog is 100%.

Group of orthologs #992. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.ramorum:50

Q967X2              	100.00%		H3HEG2              	100.00%
Bootstrap support for Q967X2 as seed ortholog is 100%.
Bootstrap support for H3HEG2 as seed ortholog is 95%.

Group of orthologs #993. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 P.ramorum:163

F6QB79              	100.00%		H3GR58              	100.00%
F6RWK5              	100.00%		H3GR59              	100.00%
F6VIT0              	45.95%		H3H1Q0              	70.64%
F7AG00              	24.51%		H3GQF2              	69.10%
F7BAF2              	20.97%		H3GP17              	65.41%
F6RWI8              	5.88%		H3GR68              	57.68%
Bootstrap support for F6QB79 as seed ortholog is 78%.
Bootstrap support for F6RWK5 as seed ortholog is 71%.
Alternative seed ortholog is F6UEG1 (36 bits away from this cluster)
Bootstrap support for H3GR58 as seed ortholog is 99%.
Bootstrap support for H3GR59 as seed ortholog is 99%.

Group of orthologs #994. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.ramorum:119

F7A082              	100.00%		H3G6B9              	100.00%
                    	       		H3G766              	99.46%
Bootstrap support for F7A082 as seed ortholog is 99%.
Bootstrap support for H3G6B9 as seed ortholog is 99%.

Group of orthologs #995. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.ramorum:90

F6XPZ4              	100.00%		H3G670              	100.00%
Bootstrap support for F6XPZ4 as seed ortholog is 100%.
Bootstrap support for H3G670 as seed ortholog is 99%.

Group of orthologs #996. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 P.ramorum:83

F6VFZ2              	100.00%		H3GFH2              	100.00%
Bootstrap support for F6VFZ2 as seed ortholog is 83%.
Bootstrap support for H3GFH2 as seed ortholog is 99%.

Group of orthologs #997. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 P.ramorum:239

F6TRN8              	100.00%		H3H0T8              	100.00%
Bootstrap support for F6TRN8 as seed ortholog is 100%.
Bootstrap support for H3H0T8 as seed ortholog is 100%.

Group of orthologs #998. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 P.ramorum:32

F6UDY1              	100.00%		H3GV25              	100.00%
                    	       		H3GNL4              	11.23%
Bootstrap support for F6UDY1 as seed ortholog is 100%.
Bootstrap support for H3GV25 as seed ortholog is 80%.

Group of orthologs #999. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 P.ramorum:238

F6R7I5              	100.00%		H3G565              	100.00%
Bootstrap support for F6R7I5 as seed ortholog is 100%.
Bootstrap support for H3G565 as seed ortholog is 100%.

Group of orthologs #1000. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.ramorum:127

F6RGE7              	100.00%		H3G8B2              	100.00%
Bootstrap support for F6RGE7 as seed ortholog is 100%.
Bootstrap support for H3G8B2 as seed ortholog is 100%.

Group of orthologs #1001. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.ramorum:115

F6XGG4              	100.00%		H3G9X0              	100.00%
Bootstrap support for F6XGG4 as seed ortholog is 99%.
Bootstrap support for H3G9X0 as seed ortholog is 100%.

Group of orthologs #1002. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 P.ramorum:135

F6VAT4              	100.00%		H3GJ43              	100.00%
F6YS00              	10.68%		H3GJ44              	72.76%
                    	       		H3GZU1              	15.60%
                    	       		H3GZU0              	14.77%
Bootstrap support for F6VAT4 as seed ortholog is 100%.
Bootstrap support for H3GJ43 as seed ortholog is 99%.

Group of orthologs #1003. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 P.ramorum:29

F6S399              	100.00%		H3G6S6              	100.00%
Bootstrap support for F6S399 as seed ortholog is 100%.
Bootstrap support for H3G6S6 as seed ortholog is 78%.

Group of orthologs #1004. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.ramorum:17

F6ULQ2              	100.00%		H3GEH0              	100.00%
Bootstrap support for F6ULQ2 as seed ortholog is 95%.
Bootstrap support for H3GEH0 as seed ortholog is 70%.
Alternative seed ortholog is H3H3Y5 (17 bits away from this cluster)

Group of orthologs #1005. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 P.ramorum:116

H2XJZ5              	100.00%		H3GCN9              	100.00%
Bootstrap support for H2XJZ5 as seed ortholog is 100%.
Bootstrap support for H3GCN9 as seed ortholog is 99%.

Group of orthologs #1006. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 P.ramorum:237

F6X9L5              	100.00%		H3GWU6              	100.00%
Bootstrap support for F6X9L5 as seed ortholog is 100%.
Bootstrap support for H3GWU6 as seed ortholog is 100%.

Group of orthologs #1007. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.ramorum:90

F7AZT4              	100.00%		H3GWN5              	100.00%
Bootstrap support for F7AZT4 as seed ortholog is 96%.
Bootstrap support for H3GWN5 as seed ortholog is 99%.

Group of orthologs #1008. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.ramorum:71

L7N0U6              	100.00%		H3G8N8              	100.00%
F6PS78              	99.15%		
Bootstrap support for L7N0U6 as seed ortholog is 99%.
Bootstrap support for H3G8N8 as seed ortholog is 99%.

Group of orthologs #1009. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 P.ramorum:236

F6TCH6              	100.00%		H3GQR9              	100.00%
Bootstrap support for F6TCH6 as seed ortholog is 100%.
Bootstrap support for H3GQR9 as seed ortholog is 100%.

Group of orthologs #1010. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.ramorum:235

F6TUR1              	100.00%		H3GAT4              	100.00%
Bootstrap support for F6TUR1 as seed ortholog is 99%.
Bootstrap support for H3GAT4 as seed ortholog is 100%.

Group of orthologs #1011. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 P.ramorum:235

F6V6R4              	100.00%		H3GIY8              	100.00%
Bootstrap support for F6V6R4 as seed ortholog is 100%.
Bootstrap support for H3GIY8 as seed ortholog is 100%.

Group of orthologs #1012. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:134

F6X9K2              	100.00%		H3GJM6              	100.00%
Bootstrap support for F6X9K2 as seed ortholog is 100%.
Bootstrap support for H3GJM6 as seed ortholog is 100%.

Group of orthologs #1013. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.ramorum:124

H2XRU5              	100.00%		H3G8P2              	100.00%
Bootstrap support for H2XRU5 as seed ortholog is 100%.
Bootstrap support for H3G8P2 as seed ortholog is 100%.

Group of orthologs #1014. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 P.ramorum:235

F6TX35              	100.00%		H3H2J5              	100.00%
Bootstrap support for F6TX35 as seed ortholog is 100%.
Bootstrap support for H3H2J5 as seed ortholog is 100%.

Group of orthologs #1015. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 P.ramorum:234

F6YGZ1              	100.00%		H3GC60              	100.00%
Bootstrap support for F6YGZ1 as seed ortholog is 100%.
Bootstrap support for H3GC60 as seed ortholog is 100%.

Group of orthologs #1016. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 P.ramorum:234

F6Z0E0              	100.00%		H3GCD0              	100.00%
Bootstrap support for F6Z0E0 as seed ortholog is 100%.
Bootstrap support for H3GCD0 as seed ortholog is 100%.

Group of orthologs #1017. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 P.ramorum:234

F6UE24              	100.00%		H3HCT8              	100.00%
Bootstrap support for F6UE24 as seed ortholog is 100%.
Bootstrap support for H3HCT8 as seed ortholog is 100%.

Group of orthologs #1018. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.ramorum:121

F6S2W5              	100.00%		H3G9K8              	100.00%
Bootstrap support for F6S2W5 as seed ortholog is 99%.
Bootstrap support for H3G9K8 as seed ortholog is 100%.

Group of orthologs #1019. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 P.ramorum:233

H2XZ65              	100.00%		H3G9Y9              	100.00%
Bootstrap support for H2XZ65 as seed ortholog is 100%.
Bootstrap support for H3G9Y9 as seed ortholog is 100%.

Group of orthologs #1020. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 P.ramorum:233

F7BF26              	100.00%		H3GV69              	100.00%
Bootstrap support for F7BF26 as seed ortholog is 100%.
Bootstrap support for H3GV69 as seed ortholog is 100%.

Group of orthologs #1021. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 P.ramorum:233

F6ZZH3              	100.00%		H3H0Y8              	100.00%
Bootstrap support for F6ZZH3 as seed ortholog is 100%.
Bootstrap support for H3H0Y8 as seed ortholog is 100%.

Group of orthologs #1022. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 P.ramorum:232

F6W170              	100.00%		H3GRT1              	100.00%
                    	       		H3H884              	97.61%
Bootstrap support for F6W170 as seed ortholog is 100%.
Bootstrap support for H3GRT1 as seed ortholog is 100%.

Group of orthologs #1023. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.ramorum:43

F7A771              	100.00%		H3G8K4              	100.00%
Bootstrap support for F7A771 as seed ortholog is 94%.
Bootstrap support for H3G8K4 as seed ortholog is 95%.

Group of orthologs #1024. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 P.ramorum:232

F6R901              	100.00%		H3GZE6              	100.00%
Bootstrap support for F6R901 as seed ortholog is 100%.
Bootstrap support for H3GZE6 as seed ortholog is 100%.

Group of orthologs #1025. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 P.ramorum:87

H2XY83              	100.00%		H3G7K9              	100.00%
Bootstrap support for H2XY83 as seed ortholog is 100%.
Bootstrap support for H3G7K9 as seed ortholog is 98%.

Group of orthologs #1026. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 P.ramorum:232

F6YGD1              	100.00%		H3GV35              	100.00%
Bootstrap support for F6YGD1 as seed ortholog is 100%.
Bootstrap support for H3GV35 as seed ortholog is 100%.

Group of orthologs #1027. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 P.ramorum:232

H2Y100              	100.00%		H3GE89              	100.00%
Bootstrap support for H2Y100 as seed ortholog is 100%.
Bootstrap support for H3GE89 as seed ortholog is 100%.

Group of orthologs #1028. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 P.ramorum:232

H2XTN0              	100.00%		H3HC64              	100.00%
Bootstrap support for H2XTN0 as seed ortholog is 100%.
Bootstrap support for H3HC64 as seed ortholog is 100%.

Group of orthologs #1029. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 P.ramorum:231

F6QQ08              	100.00%		H3G8T4              	100.00%
Bootstrap support for F6QQ08 as seed ortholog is 100%.
Bootstrap support for H3G8T4 as seed ortholog is 100%.

Group of orthologs #1030. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 P.ramorum:231

F6YG81              	100.00%		H3GFJ9              	100.00%
Bootstrap support for F6YG81 as seed ortholog is 100%.
Bootstrap support for H3GFJ9 as seed ortholog is 100%.

Group of orthologs #1031. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 P.ramorum:231

H2Y240              	100.00%		H3GC32              	100.00%
Bootstrap support for H2Y240 as seed ortholog is 100%.
Bootstrap support for H3GC32 as seed ortholog is 100%.

Group of orthologs #1032. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.ramorum:230

F6VTZ3              	100.00%		H3G701              	100.00%
                    	       		H3GSV1              	77.61%
Bootstrap support for F6VTZ3 as seed ortholog is 100%.
Bootstrap support for H3G701 as seed ortholog is 100%.

Group of orthologs #1033. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 P.ramorum:37

F6Z255              	100.00%		H3G925              	100.00%
                    	       		H3G5A9              	7.10%
Bootstrap support for F6Z255 as seed ortholog is 75%.
Bootstrap support for H3G925 as seed ortholog is 91%.

Group of orthologs #1034. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.ramorum:230

H2XU57              	100.00%		H3G9F0              	100.00%
Q8I7D6              	97.18%		
Bootstrap support for H2XU57 as seed ortholog is 100%.
Bootstrap support for H3G9F0 as seed ortholog is 100%.

Group of orthologs #1035. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.ramorum:230

F6RCC2              	100.00%		H3HD26              	100.00%
I6L237              	96.67%		
Bootstrap support for F6RCC2 as seed ortholog is 100%.
Bootstrap support for H3HD26 as seed ortholog is 100%.

Group of orthologs #1036. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.ramorum:230

F6SSN4              	100.00%		H3GAA0              	100.00%
Bootstrap support for F6SSN4 as seed ortholog is 100%.
Bootstrap support for H3GAA0 as seed ortholog is 100%.

Group of orthologs #1037. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.ramorum:230

F6TJ76              	100.00%		H3G9F9              	100.00%
Bootstrap support for F6TJ76 as seed ortholog is 100%.
Bootstrap support for H3G9F9 as seed ortholog is 100%.

Group of orthologs #1038. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 P.ramorum:61

H2XLJ3              	100.00%		H3G9M4              	100.00%
Bootstrap support for H2XLJ3 as seed ortholog is 91%.
Bootstrap support for H3G9M4 as seed ortholog is 99%.

Group of orthologs #1039. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.ramorum:230

F7B1U4              	100.00%		H3GKZ9              	100.00%
Bootstrap support for F7B1U4 as seed ortholog is 100%.
Bootstrap support for H3GKZ9 as seed ortholog is 100%.

Group of orthologs #1040. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.ramorum:61

F6SFM0              	100.00%		H3GDY8              	100.00%
Bootstrap support for F6SFM0 as seed ortholog is 99%.
Bootstrap support for H3GDY8 as seed ortholog is 99%.

Group of orthologs #1041. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 P.ramorum:229

F6V5I4              	100.00%		H3GQD5              	100.00%
Bootstrap support for F6V5I4 as seed ortholog is 100%.
Bootstrap support for H3GQD5 as seed ortholog is 100%.

Group of orthologs #1042. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.ramorum:229

H2XXA8              	100.00%		H3GDR6              	100.00%
Bootstrap support for H2XXA8 as seed ortholog is 99%.
Bootstrap support for H3GDR6 as seed ortholog is 100%.

Group of orthologs #1043. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 P.ramorum:228

H2XUS4              	100.00%		H3HCG3              	100.00%
                    	       		H3G8U0              	7.94%
                    	       		H3GA58              	6.68%
Bootstrap support for H2XUS4 as seed ortholog is 100%.
Bootstrap support for H3HCG3 as seed ortholog is 100%.

Group of orthologs #1044. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.ramorum:228

F6SPI7              	100.00%		H3GLC1              	100.00%
Bootstrap support for F6SPI7 as seed ortholog is 99%.
Bootstrap support for H3GLC1 as seed ortholog is 100%.

Group of orthologs #1045. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.ramorum:228

F7AIP5              	100.00%		H3GHC2              	100.00%
Bootstrap support for F7AIP5 as seed ortholog is 99%.
Bootstrap support for H3GHC2 as seed ortholog is 100%.

Group of orthologs #1046. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 P.ramorum:228

H2Y0X5              	100.00%		H3GA46              	100.00%
Bootstrap support for H2Y0X5 as seed ortholog is 100%.
Bootstrap support for H3GA46 as seed ortholog is 100%.

Group of orthologs #1047. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.ramorum:167

H2XZQ0              	100.00%		H3GKK6              	100.00%
Bootstrap support for H2XZQ0 as seed ortholog is 100%.
Bootstrap support for H3GKK6 as seed ortholog is 100%.

Group of orthologs #1048. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 P.ramorum:227

H2XU51              	100.00%		H3HDR9              	100.00%
Bootstrap support for H2XU51 as seed ortholog is 100%.
Bootstrap support for H3HDR9 as seed ortholog is 100%.

Group of orthologs #1049. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 P.ramorum:20

F6TFY3              	100.00%		H3GAB0              	100.00%
Bootstrap support for F6TFY3 as seed ortholog is 54%.
Alternative seed ortholog is F6QXH6 (4 bits away from this cluster)
Bootstrap support for H3GAB0 as seed ortholog is 78%.

Group of orthologs #1050. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 P.ramorum:226

F7B499              	100.00%		H3G5S1              	100.00%
Bootstrap support for F7B499 as seed ortholog is 100%.
Bootstrap support for H3G5S1 as seed ortholog is 100%.

Group of orthologs #1051. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 P.ramorum:15

F6SKI3              	100.00%		H3GBJ0              	100.00%
Bootstrap support for F6SKI3 as seed ortholog is 68%.
Alternative seed ortholog is F6R798 (26 bits away from this cluster)
Bootstrap support for H3GBJ0 as seed ortholog is 64%.
Alternative seed ortholog is H3GL72 (15 bits away from this cluster)

Group of orthologs #1052. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.ramorum:175

F6SGR7              	100.00%		H3GX75              	100.00%
Bootstrap support for F6SGR7 as seed ortholog is 99%.
Bootstrap support for H3GX75 as seed ortholog is 99%.

Group of orthologs #1053. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 P.ramorum:225

F6YQR4              	100.00%		H3GK58              	100.00%
Bootstrap support for F6YQR4 as seed ortholog is 100%.
Bootstrap support for H3GK58 as seed ortholog is 100%.

Group of orthologs #1054. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 P.ramorum:225

F6XIP9              	100.00%		H3H0U9              	100.00%
Bootstrap support for F6XIP9 as seed ortholog is 100%.
Bootstrap support for H3H0U9 as seed ortholog is 100%.

Group of orthologs #1055. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 P.ramorum:225

F6ZBF1              	100.00%		H3GZZ4              	100.00%
Bootstrap support for F6ZBF1 as seed ortholog is 100%.
Bootstrap support for H3GZZ4 as seed ortholog is 100%.

Group of orthologs #1056. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 P.ramorum:116

F6ZL64              	100.00%		H3HDW2              	100.00%
Bootstrap support for F6ZL64 as seed ortholog is 100%.
Bootstrap support for H3HDW2 as seed ortholog is 99%.

Group of orthologs #1057. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 P.ramorum:224

H2Y1K8              	100.00%		H3G6F6              	100.00%
                    	       		H3GMG6              	39.53%
                    	       		H3HC86              	18.97%
                    	       		H3GTD5              	5.14%
Bootstrap support for H2Y1K8 as seed ortholog is 100%.
Bootstrap support for H3G6F6 as seed ortholog is 100%.

Group of orthologs #1058. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:147

F6TXW3              	100.00%		H3G8V5              	100.00%
Bootstrap support for F6TXW3 as seed ortholog is 100%.
Bootstrap support for H3G8V5 as seed ortholog is 100%.

Group of orthologs #1059. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 P.ramorum:224

F6PN41              	100.00%		H3GPI8              	100.00%
Bootstrap support for F6PN41 as seed ortholog is 100%.
Bootstrap support for H3GPI8 as seed ortholog is 100%.

Group of orthologs #1060. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 P.ramorum:224

F6YTX7              	100.00%		H3G4Z2              	100.00%
Bootstrap support for F6YTX7 as seed ortholog is 100%.
Bootstrap support for H3G4Z2 as seed ortholog is 100%.

Group of orthologs #1061. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.ramorum:126

F6VJT7              	100.00%		H3GSW4              	100.00%
F7BLJ0              	33.19%		H3GBN3              	11.32%
F6SF16              	16.94%		H3GZM7              	11.22%
                    	       		H3GNG0              	10.31%
                    	       		H3H8C2              	9.71%
Bootstrap support for F6VJT7 as seed ortholog is 100%.
Bootstrap support for H3GSW4 as seed ortholog is 99%.

Group of orthologs #1062. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.ramorum:223

F6WJQ0              	100.00%		H3G927              	100.00%
Bootstrap support for F6WJQ0 as seed ortholog is 100%.
Bootstrap support for H3G927 as seed ortholog is 100%.

Group of orthologs #1063. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.ramorum:223

F6Z7S0              	100.00%		H3G916              	100.00%
Bootstrap support for F6Z7S0 as seed ortholog is 100%.
Bootstrap support for H3G916 as seed ortholog is 100%.

Group of orthologs #1064. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.ramorum:66

F7AHE1              	100.00%		H3G6L4              	100.00%
Bootstrap support for F7AHE1 as seed ortholog is 99%.
Bootstrap support for H3G6L4 as seed ortholog is 99%.

Group of orthologs #1065. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.ramorum:223

Q1RLA5              	100.00%		H3G5Y3              	100.00%
Bootstrap support for Q1RLA5 as seed ortholog is 100%.
Bootstrap support for H3G5Y3 as seed ortholog is 100%.

Group of orthologs #1066. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.ramorum:21

F6UUA2              	100.00%		H3HDQ4              	100.00%
Bootstrap support for F6UUA2 as seed ortholog is 100%.
Bootstrap support for H3HDQ4 as seed ortholog is 68%.
Alternative seed ortholog is H3G6I7 (21 bits away from this cluster)

Group of orthologs #1067. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.ramorum:35

F6YGL5              	100.00%		H3HEH4              	100.00%
Bootstrap support for F6YGL5 as seed ortholog is 99%.
Bootstrap support for H3HEH4 as seed ortholog is 83%.

Group of orthologs #1068. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 P.ramorum:222

F6QZV1              	100.00%		H3GWG1              	100.00%
H2Y331              	77.69%		
Bootstrap support for F6QZV1 as seed ortholog is 100%.
Bootstrap support for H3GWG1 as seed ortholog is 100%.

Group of orthologs #1069. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 P.ramorum:222

A1XDA5              	100.00%		A1XDC2              	100.00%
Bootstrap support for A1XDA5 as seed ortholog is 100%.
Bootstrap support for A1XDC2 as seed ortholog is 100%.

Group of orthologs #1070. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 P.ramorum:222

F6PQL4              	100.00%		H3GU37              	100.00%
Bootstrap support for F6PQL4 as seed ortholog is 100%.
Bootstrap support for H3GU37 as seed ortholog is 100%.

Group of orthologs #1071. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 P.ramorum:222

F6PXD8              	100.00%		H3HCW0              	100.00%
Bootstrap support for F6PXD8 as seed ortholog is 100%.
Bootstrap support for H3HCW0 as seed ortholog is 100%.

Group of orthologs #1072. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 P.ramorum:72

F6R8L5              	100.00%		H3HDC8              	100.00%
Bootstrap support for F6R8L5 as seed ortholog is 100%.
Bootstrap support for H3HDC8 as seed ortholog is 88%.

Group of orthologs #1073. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 P.ramorum:222

H2Y1D7              	100.00%		H3G7U0              	100.00%
Bootstrap support for H2Y1D7 as seed ortholog is 100%.
Bootstrap support for H3G7U0 as seed ortholog is 100%.

Group of orthologs #1074. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 P.ramorum:221

F6RHG2              	100.00%		H3GA82              	100.00%
Bootstrap support for F6RHG2 as seed ortholog is 100%.
Bootstrap support for H3GA82 as seed ortholog is 100%.

Group of orthologs #1075. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 P.ramorum:221

F6ZYJ2              	100.00%		H3GZX2              	100.00%
Bootstrap support for F6ZYJ2 as seed ortholog is 100%.
Bootstrap support for H3GZX2 as seed ortholog is 100%.

Group of orthologs #1076. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.ramorum:220

F7B1Y1              	100.00%		H3GU44              	100.00%
Q8I7D5              	90.41%		
Bootstrap support for F7B1Y1 as seed ortholog is 100%.
Bootstrap support for H3GU44 as seed ortholog is 100%.

Group of orthologs #1077. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.ramorum:220

F6RYD4              	100.00%		H3GIN9              	100.00%
Bootstrap support for F6RYD4 as seed ortholog is 100%.
Bootstrap support for H3GIN9 as seed ortholog is 100%.

Group of orthologs #1078. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.ramorum:220

H2XXH1              	100.00%		H3G8T5              	100.00%
Bootstrap support for H2XXH1 as seed ortholog is 100%.
Bootstrap support for H3G8T5 as seed ortholog is 100%.

Group of orthologs #1079. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.ramorum:149

F7B1W3              	100.00%		H3GW85              	100.00%
Bootstrap support for F7B1W3 as seed ortholog is 100%.
Bootstrap support for H3GW85 as seed ortholog is 100%.

Group of orthologs #1080. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.ramorum:220

F7AA18              	100.00%		H3H6N8              	100.00%
Bootstrap support for F7AA18 as seed ortholog is 100%.
Bootstrap support for H3H6N8 as seed ortholog is 100%.

Group of orthologs #1081. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.ramorum:220

H2XY10              	100.00%		H3GRP6              	100.00%
Bootstrap support for H2XY10 as seed ortholog is 100%.
Bootstrap support for H3GRP6 as seed ortholog is 100%.

Group of orthologs #1082. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 P.ramorum:219

F6TRZ2              	100.00%		H3G8S1              	100.00%
Bootstrap support for F6TRZ2 as seed ortholog is 100%.
Bootstrap support for H3G8S1 as seed ortholog is 100%.

Group of orthologs #1083. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 P.ramorum:66

F6YFP0              	100.00%		H3G853              	100.00%
Bootstrap support for F6YFP0 as seed ortholog is 100%.
Bootstrap support for H3G853 as seed ortholog is 90%.

Group of orthologs #1084. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 P.ramorum:219

F6YCP6              	100.00%		H3GUH8              	100.00%
Bootstrap support for F6YCP6 as seed ortholog is 100%.
Bootstrap support for H3GUH8 as seed ortholog is 100%.

Group of orthologs #1085. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.ramorum:91

F7A5W3              	100.00%		H3GWA9              	100.00%
Bootstrap support for F7A5W3 as seed ortholog is 99%.
Bootstrap support for H3GWA9 as seed ortholog is 99%.

Group of orthologs #1086. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 P.ramorum:218

C4B8X4              	100.00%		H3GLW4              	100.00%
Bootstrap support for C4B8X4 as seed ortholog is 100%.
Bootstrap support for H3GLW4 as seed ortholog is 100%.

Group of orthologs #1087. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 P.ramorum:218

F6Y6X7              	100.00%		H3G7U4              	100.00%
Bootstrap support for F6Y6X7 as seed ortholog is 100%.
Bootstrap support for H3G7U4 as seed ortholog is 100%.

Group of orthologs #1088. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 P.ramorum:218

F6Y089              	100.00%		H3G9Z9              	100.00%
Bootstrap support for F6Y089 as seed ortholog is 100%.
Bootstrap support for H3G9Z9 as seed ortholog is 100%.

Group of orthologs #1089. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 P.ramorum:218

F6VAF3              	100.00%		H3GU39              	100.00%
Bootstrap support for F6VAF3 as seed ortholog is 100%.
Bootstrap support for H3GU39 as seed ortholog is 100%.

Group of orthologs #1090. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 P.ramorum:85

F6YMX2              	100.00%		H3H2V0              	100.00%
Bootstrap support for F6YMX2 as seed ortholog is 56%.
Alternative seed ortholog is H2Y3S8 (12 bits away from this cluster)
Bootstrap support for H3H2V0 as seed ortholog is 98%.

Group of orthologs #1091. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 P.ramorum:218

F6VN53              	100.00%		H3HC32              	100.00%
Bootstrap support for F6VN53 as seed ortholog is 100%.
Bootstrap support for H3HC32 as seed ortholog is 100%.

Group of orthologs #1092. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 P.ramorum:217

F6U1Z4              	100.00%		H3G895              	100.00%
Bootstrap support for F6U1Z4 as seed ortholog is 100%.
Bootstrap support for H3G895 as seed ortholog is 100%.

Group of orthologs #1093. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 P.ramorum:217

F6QAP0              	100.00%		H3GH46              	100.00%
Bootstrap support for F6QAP0 as seed ortholog is 100%.
Bootstrap support for H3GH46 as seed ortholog is 100%.

Group of orthologs #1094. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.ramorum:148

F6UHS2              	100.00%		H3GA88              	100.00%
Bootstrap support for F6UHS2 as seed ortholog is 98%.
Bootstrap support for H3GA88 as seed ortholog is 100%.

Group of orthologs #1095. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 P.ramorum:217

F6YRR0              	100.00%		H3G8D4              	100.00%
Bootstrap support for F6YRR0 as seed ortholog is 100%.
Bootstrap support for H3G8D4 as seed ortholog is 100%.

Group of orthologs #1096. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 P.ramorum:217

F6T4V8              	100.00%		H3H0H6              	100.00%
Bootstrap support for F6T4V8 as seed ortholog is 100%.
Bootstrap support for H3H0H6 as seed ortholog is 100%.

Group of orthologs #1097. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.ramorum:116

H2XPM6              	100.00%		H3GBG8              	100.00%
Bootstrap support for H2XPM6 as seed ortholog is 99%.
Bootstrap support for H3GBG8 as seed ortholog is 99%.

Group of orthologs #1098. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 P.ramorum:73

F7A9D9              	100.00%		H3GMU5              	100.00%
Bootstrap support for F7A9D9 as seed ortholog is 100%.
Bootstrap support for H3GMU5 as seed ortholog is 99%.

Group of orthologs #1099. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.ramorum:131

Q8I7E2              	100.00%		H3G9W3              	100.00%
Bootstrap support for Q8I7E2 as seed ortholog is 99%.
Bootstrap support for H3G9W3 as seed ortholog is 99%.

Group of orthologs #1100. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.ramorum:216

F6VBG8              	100.00%		H3G7N7              	100.00%
Bootstrap support for F6VBG8 as seed ortholog is 99%.
Bootstrap support for H3G7N7 as seed ortholog is 100%.

Group of orthologs #1101. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 P.ramorum:216

F6YGG6              	100.00%		H3G971              	100.00%
Bootstrap support for F6YGG6 as seed ortholog is 100%.
Bootstrap support for H3G971 as seed ortholog is 100%.

Group of orthologs #1102. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 P.ramorum:139

F6W282              	100.00%		H3G819              	100.00%
                    	       		H3G820              	78.72%
Bootstrap support for F6W282 as seed ortholog is 100%.
Bootstrap support for H3G819 as seed ortholog is 99%.

Group of orthologs #1103. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 P.ramorum:163

F7B314              	100.00%		H3HAT8              	100.00%
Bootstrap support for F7B314 as seed ortholog is 100%.
Bootstrap support for H3HAT8 as seed ortholog is 99%.

Group of orthologs #1104. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 P.ramorum:214

F6ZGT8              	100.00%		H3GD54              	100.00%
Bootstrap support for F6ZGT8 as seed ortholog is 100%.
Bootstrap support for H3GD54 as seed ortholog is 100%.

Group of orthologs #1105. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 P.ramorum:214

F7AUL7              	100.00%		H3GFF5              	100.00%
Bootstrap support for F7AUL7 as seed ortholog is 100%.
Bootstrap support for H3GFF5 as seed ortholog is 100%.

Group of orthologs #1106. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 P.ramorum:214

F7BDS7              	100.00%		H3GM15              	100.00%
Bootstrap support for F7BDS7 as seed ortholog is 100%.
Bootstrap support for H3GM15 as seed ortholog is 100%.

Group of orthologs #1107. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.ramorum:97

F6QE09              	100.00%		H3G5F9              	100.00%
Bootstrap support for F6QE09 as seed ortholog is 99%.
Bootstrap support for H3G5F9 as seed ortholog is 99%.

Group of orthologs #1108. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.ramorum:213

F6W141              	100.00%		H3GHE9              	100.00%
Bootstrap support for F6W141 as seed ortholog is 100%.
Bootstrap support for H3GHE9 as seed ortholog is 100%.

Group of orthologs #1109. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.ramorum:213

F6T2S3              	100.00%		H3GPM7              	100.00%
Bootstrap support for F6T2S3 as seed ortholog is 100%.
Bootstrap support for H3GPM7 as seed ortholog is 100%.

Group of orthologs #1110. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.ramorum:213

F6UQJ9              	100.00%		H3GMW4              	100.00%
Bootstrap support for F6UQJ9 as seed ortholog is 100%.
Bootstrap support for H3GMW4 as seed ortholog is 100%.

Group of orthologs #1111. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:104

F6ZJP7              	100.00%		H3G7R5              	100.00%
Bootstrap support for F6ZJP7 as seed ortholog is 100%.
Bootstrap support for H3G7R5 as seed ortholog is 99%.

Group of orthologs #1112. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.ramorum:212

F6TEZ1              	100.00%		H3GNT1              	100.00%
Bootstrap support for F6TEZ1 as seed ortholog is 100%.
Bootstrap support for H3GNT1 as seed ortholog is 100%.

Group of orthologs #1113. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 P.ramorum:212

F6TAD8              	100.00%		H3GQ98              	100.00%
Bootstrap support for F6TAD8 as seed ortholog is 100%.
Bootstrap support for H3GQ98 as seed ortholog is 100%.

Group of orthologs #1114. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 P.ramorum:41

H2Y1I3              	100.00%		H3GG27              	100.00%
Bootstrap support for H2Y1I3 as seed ortholog is 100%.
Bootstrap support for H3GG27 as seed ortholog is 91%.

Group of orthologs #1115. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 P.ramorum:212

Q67EQ6              	100.00%		H3GHT1              	100.00%
Bootstrap support for Q67EQ6 as seed ortholog is 100%.
Bootstrap support for H3GHT1 as seed ortholog is 100%.

Group of orthologs #1116. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 P.ramorum:212

F7AAL8              	100.00%		H3HBE1              	100.00%
Bootstrap support for F7AAL8 as seed ortholog is 100%.
Bootstrap support for H3HBE1 as seed ortholog is 100%.

Group of orthologs #1117. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 P.ramorum:211

F6RA92              	100.00%		H3GE34              	100.00%
                    	       		H3GSQ0              	5.14%
Bootstrap support for F6RA92 as seed ortholog is 100%.
Bootstrap support for H3GE34 as seed ortholog is 100%.

Group of orthologs #1118. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 P.ramorum:106

F6UNA3              	100.00%		H3HDF6              	100.00%
F6QH95              	34.41%		
Bootstrap support for F6UNA3 as seed ortholog is 100%.
Bootstrap support for H3HDF6 as seed ortholog is 98%.

Group of orthologs #1119. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 P.ramorum:56

F7AX33              	100.00%		H3GA68              	100.00%
Bootstrap support for F7AX33 as seed ortholog is 100%.
Bootstrap support for H3GA68 as seed ortholog is 94%.

Group of orthologs #1120. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 P.ramorum:211

F6W0Q4              	100.00%		H3GXU2              	100.00%
Bootstrap support for F6W0Q4 as seed ortholog is 100%.
Bootstrap support for H3GXU2 as seed ortholog is 100%.

Group of orthologs #1121. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 P.ramorum:210

F6UF46              	100.00%		H3GVM8              	100.00%
F6QGB1              	9.61%		H3H2M2              	83.61%
Bootstrap support for F6UF46 as seed ortholog is 100%.
Bootstrap support for H3GVM8 as seed ortholog is 100%.

Group of orthologs #1122. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.ramorum:210

F6T7J7              	100.00%		H3G6V4              	100.00%
Bootstrap support for F6T7J7 as seed ortholog is 100%.
Bootstrap support for H3G6V4 as seed ortholog is 100%.

Group of orthologs #1123. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 P.ramorum:210

F6YHC8              	100.00%		H3GFZ5              	100.00%
Bootstrap support for F6YHC8 as seed ortholog is 100%.
Bootstrap support for H3GFZ5 as seed ortholog is 100%.

Group of orthologs #1124. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 P.ramorum:210

F6PH90              	100.00%		H3HD02              	100.00%
Bootstrap support for F6PH90 as seed ortholog is 100%.
Bootstrap support for H3HD02 as seed ortholog is 100%.

Group of orthologs #1125. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 P.ramorum:210

H2XLW7              	100.00%		H3GJ86              	100.00%
Bootstrap support for H2XLW7 as seed ortholog is 100%.
Bootstrap support for H3GJ86 as seed ortholog is 100%.

Group of orthologs #1126. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 P.ramorum:87

F7AB24              	100.00%		H3GY76              	100.00%
Bootstrap support for F7AB24 as seed ortholog is 100%.
Bootstrap support for H3GY76 as seed ortholog is 98%.

Group of orthologs #1127. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.ramorum:209

F6U8M8              	100.00%		H3G9P1              	100.00%
Bootstrap support for F6U8M8 as seed ortholog is 99%.
Bootstrap support for H3G9P1 as seed ortholog is 100%.

Group of orthologs #1128. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 P.ramorum:209

F7BDH1              	100.00%		H3GZZ0              	100.00%
Bootstrap support for F7BDH1 as seed ortholog is 100%.
Bootstrap support for H3GZZ0 as seed ortholog is 100%.

Group of orthologs #1129. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.ramorum:208

F6UA65              	100.00%		H3GII1              	100.00%
Bootstrap support for F6UA65 as seed ortholog is 100%.
Bootstrap support for H3GII1 as seed ortholog is 100%.

Group of orthologs #1130. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.ramorum:208

F7B2L3              	100.00%		H3G940              	100.00%
Bootstrap support for F7B2L3 as seed ortholog is 100%.
Bootstrap support for H3G940 as seed ortholog is 100%.

Group of orthologs #1131. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.ramorum:208

F6ZXH6              	100.00%		H3GJE0              	100.00%
Bootstrap support for F6ZXH6 as seed ortholog is 100%.
Bootstrap support for H3GJE0 as seed ortholog is 100%.

Group of orthologs #1132. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.ramorum:208

H2XVI6              	100.00%		H3GBG3              	100.00%
Bootstrap support for H2XVI6 as seed ortholog is 91%.
Bootstrap support for H3GBG3 as seed ortholog is 100%.

Group of orthologs #1133. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.ramorum:208

I6L7H7              	100.00%		H3G546              	100.00%
Bootstrap support for I6L7H7 as seed ortholog is 100%.
Bootstrap support for H3G546 as seed ortholog is 100%.

Group of orthologs #1134. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.ramorum:208

H2Y0G9              	100.00%		H3HCM8              	100.00%
Bootstrap support for H2Y0G9 as seed ortholog is 99%.
Bootstrap support for H3HCM8 as seed ortholog is 100%.

Group of orthologs #1135. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.ramorum:208

H2Y050              	100.00%		H3HDB7              	100.00%
Bootstrap support for H2Y050 as seed ortholog is 100%.
Bootstrap support for H3HDB7 as seed ortholog is 100%.

Group of orthologs #1136. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.ramorum:66

F7A8Z2              	100.00%		H3GJ16              	100.00%
F6Y1V1              	30.95%		
Bootstrap support for F7A8Z2 as seed ortholog is 86%.
Bootstrap support for H3GJ16 as seed ortholog is 96%.

Group of orthologs #1137. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.ramorum:207

F6RGI4              	100.00%		H3G9L4              	100.00%
Bootstrap support for F6RGI4 as seed ortholog is 100%.
Bootstrap support for H3G9L4 as seed ortholog is 100%.

Group of orthologs #1138. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.ramorum:207

F6ZP02              	100.00%		H3G9C3              	100.00%
Bootstrap support for F6ZP02 as seed ortholog is 100%.
Bootstrap support for H3G9C3 as seed ortholog is 100%.

Group of orthologs #1139. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.ramorum:207

F7AJZ2              	100.00%		H3GH76              	100.00%
Bootstrap support for F7AJZ2 as seed ortholog is 100%.
Bootstrap support for H3GH76 as seed ortholog is 100%.

Group of orthologs #1140. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.ramorum:162

F7APT3              	100.00%		H3H1L9              	100.00%
Bootstrap support for F7APT3 as seed ortholog is 100%.
Bootstrap support for H3H1L9 as seed ortholog is 100%.

Group of orthologs #1141. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.ramorum:205

F6PQW3              	100.00%		H3GGH4              	100.00%
F7AXL0              	6.49%		
Bootstrap support for F6PQW3 as seed ortholog is 100%.
Bootstrap support for H3GGH4 as seed ortholog is 100%.

Group of orthologs #1142. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.ramorum:111

H2XN47              	100.00%		H3G8M3              	100.00%
Bootstrap support for H2XN47 as seed ortholog is 100%.
Bootstrap support for H3G8M3 as seed ortholog is 100%.

Group of orthologs #1143. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.ramorum:106

F6XB39              	100.00%		H3GS89              	100.00%
Bootstrap support for F6XB39 as seed ortholog is 99%.
Bootstrap support for H3GS89 as seed ortholog is 99%.

Group of orthologs #1144. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.ramorum:205

F6U2V6              	100.00%		H3H479              	100.00%
Bootstrap support for F6U2V6 as seed ortholog is 100%.
Bootstrap support for H3H479 as seed ortholog is 100%.

Group of orthologs #1145. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.ramorum:87

F7AFK8              	100.00%		H3GQ39              	100.00%
Bootstrap support for F7AFK8 as seed ortholog is 99%.
Bootstrap support for H3GQ39 as seed ortholog is 99%.

Group of orthologs #1146. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 P.ramorum:35

F6XYB7              	100.00%		H3GY72              	100.00%
Bootstrap support for F6XYB7 as seed ortholog is 76%.
Bootstrap support for H3GY72 as seed ortholog is 89%.

Group of orthologs #1147. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 P.ramorum:204

F6X0N8              	100.00%		H3G8S7              	100.00%
L7N0S6              	83.12%		
Bootstrap support for F6X0N8 as seed ortholog is 100%.
Bootstrap support for H3G8S7 as seed ortholog is 100%.

Group of orthologs #1148. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.ramorum:2

F7BBQ5              	100.00%		H3G8V0              	100.00%
F6YB01              	34.09%		
Bootstrap support for F7BBQ5 as seed ortholog is 100%.
Bootstrap support for H3G8V0 as seed ortholog is 46%.
Alternative seed ortholog is H3HCR6 (2 bits away from this cluster)

Group of orthologs #1149. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 P.ramorum:204

F6SSX2              	100.00%		H3G8S0              	100.00%
Bootstrap support for F6SSX2 as seed ortholog is 100%.
Bootstrap support for H3G8S0 as seed ortholog is 100%.

Group of orthologs #1150. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.ramorum:71

F6ZMB2              	100.00%		H3G721              	100.00%
Bootstrap support for F6ZMB2 as seed ortholog is 90%.
Bootstrap support for H3G721 as seed ortholog is 98%.

Group of orthologs #1151. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 P.ramorum:204

H2XP26              	100.00%		H3G6D6              	100.00%
Bootstrap support for H2XP26 as seed ortholog is 100%.
Bootstrap support for H3G6D6 as seed ortholog is 100%.

Group of orthologs #1152. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 P.ramorum:204

F6W2L5              	100.00%		H3GSF0              	100.00%
Bootstrap support for F6W2L5 as seed ortholog is 100%.
Bootstrap support for H3GSF0 as seed ortholog is 100%.

Group of orthologs #1153. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 P.ramorum:204

F7BHN6              	100.00%		H3GVQ4              	100.00%
Bootstrap support for F7BHN6 as seed ortholog is 100%.
Bootstrap support for H3GVQ4 as seed ortholog is 100%.

Group of orthologs #1154. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.ramorum:203

F6ZKF6              	100.00%		H3GZD8              	100.00%
F6X638              	25.93%		H3GL96              	11.29%
F6X612              	16.85%		
F6VLY9              	12.78%		
H2XZ13              	5.00%		
Bootstrap support for F6ZKF6 as seed ortholog is 99%.
Bootstrap support for H3GZD8 as seed ortholog is 100%.

Group of orthologs #1155. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.ramorum:203

F6WQW9              	100.00%		H3G750              	100.00%
                    	       		H3G788              	8.78%
Bootstrap support for F6WQW9 as seed ortholog is 100%.
Bootstrap support for H3G750 as seed ortholog is 100%.

Group of orthologs #1156. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.ramorum:203

F6RYY5              	100.00%		H3GA74              	100.00%
Bootstrap support for F6RYY5 as seed ortholog is 100%.
Bootstrap support for H3GA74 as seed ortholog is 100%.

Group of orthologs #1157. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.ramorum:203

F6UGM6              	100.00%		H3GFQ7              	100.00%
Bootstrap support for F6UGM6 as seed ortholog is 100%.
Bootstrap support for H3GFQ7 as seed ortholog is 100%.

Group of orthologs #1158. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.ramorum:203

F6YMT8              	100.00%		H3GEK5              	100.00%
Bootstrap support for F6YMT8 as seed ortholog is 100%.
Bootstrap support for H3GEK5 as seed ortholog is 100%.

Group of orthologs #1159. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.ramorum:203

F7A1R5              	100.00%		H3GC46              	100.00%
Bootstrap support for F7A1R5 as seed ortholog is 100%.
Bootstrap support for H3GC46 as seed ortholog is 100%.

Group of orthologs #1160. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.ramorum:203

F6WCM9              	100.00%		H3GL60              	100.00%
Bootstrap support for F6WCM9 as seed ortholog is 100%.
Bootstrap support for H3GL60 as seed ortholog is 100%.

Group of orthologs #1161. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.ramorum:119

H2XNZ7              	100.00%		H3GA47              	100.00%
Bootstrap support for H2XNZ7 as seed ortholog is 100%.
Bootstrap support for H3GA47 as seed ortholog is 100%.

Group of orthologs #1162. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.ramorum:203

F6TKH9              	100.00%		H3H0P3              	100.00%
Bootstrap support for F6TKH9 as seed ortholog is 99%.
Bootstrap support for H3H0P3 as seed ortholog is 100%.

Group of orthologs #1163. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.ramorum:126

F6YAA4              	100.00%		H3GTA4              	100.00%
Bootstrap support for F6YAA4 as seed ortholog is 100%.
Bootstrap support for H3GTA4 as seed ortholog is 99%.

Group of orthologs #1164. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 P.ramorum:112

F6YRX9              	100.00%		H3GTD3              	100.00%
Bootstrap support for F6YRX9 as seed ortholog is 85%.
Bootstrap support for H3GTD3 as seed ortholog is 99%.

Group of orthologs #1165. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.ramorum:203

F7AAC1              	100.00%		H3GVK2              	100.00%
Bootstrap support for F7AAC1 as seed ortholog is 100%.
Bootstrap support for H3GVK2 as seed ortholog is 100%.

Group of orthologs #1166. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.ramorum:203

F6U315              	100.00%		H3HD82              	100.00%
Bootstrap support for F6U315 as seed ortholog is 100%.
Bootstrap support for H3HD82 as seed ortholog is 100%.

Group of orthologs #1167. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.ramorum:146

F7ART8              	100.00%		H3GXG4              	100.00%
Bootstrap support for F7ART8 as seed ortholog is 99%.
Bootstrap support for H3GXG4 as seed ortholog is 100%.

Group of orthologs #1168. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 P.ramorum:142

F6X034              	100.00%		H3GAT2              	100.00%
                    	       		H3G8R8              	9.49%
                    	       		H3GAS6              	6.81%
Bootstrap support for F6X034 as seed ortholog is 100%.
Bootstrap support for H3GAT2 as seed ortholog is 99%.

Group of orthologs #1169. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 P.ramorum:202

F6SGU7              	100.00%		H3GZ56              	100.00%
H2Y279              	9.42%		
Bootstrap support for F6SGU7 as seed ortholog is 100%.
Bootstrap support for H3GZ56 as seed ortholog is 100%.

Group of orthologs #1170. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 P.ramorum:202

F6PP61              	100.00%		H3GAQ2              	100.00%
Bootstrap support for F6PP61 as seed ortholog is 100%.
Bootstrap support for H3GAQ2 as seed ortholog is 100%.

Group of orthologs #1171. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 P.ramorum:202

F6Y6W3              	100.00%		H3G9T8              	100.00%
Bootstrap support for F6Y6W3 as seed ortholog is 100%.
Bootstrap support for H3G9T8 as seed ortholog is 100%.

Group of orthologs #1172. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 P.ramorum:36

F7AG96              	100.00%		H3G613              	100.00%
Bootstrap support for F7AG96 as seed ortholog is 93%.
Bootstrap support for H3G613 as seed ortholog is 89%.

Group of orthologs #1173. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 P.ramorum:202

F7AP04              	100.00%		H3G6D8              	100.00%
Bootstrap support for F7AP04 as seed ortholog is 100%.
Bootstrap support for H3G6D8 as seed ortholog is 100%.

Group of orthologs #1174. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.ramorum:202

F6ZHS2              	100.00%		H3GYI8              	100.00%
Bootstrap support for F6ZHS2 as seed ortholog is 99%.
Bootstrap support for H3GYI8 as seed ortholog is 100%.

Group of orthologs #1175. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.ramorum:120

H2XR71              	100.00%		H3HCK4              	100.00%
                    	       		H3GQA2              	58.72%
                    	       		H3HA71              	58.72%
Bootstrap support for H2XR71 as seed ortholog is 99%.
Bootstrap support for H3HCK4 as seed ortholog is 100%.

Group of orthologs #1176. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 P.ramorum:104

H2Y3H5              	100.00%		H3GA69              	100.00%
F6SBR0              	13.17%		
Bootstrap support for H2Y3H5 as seed ortholog is 92%.
Bootstrap support for H3GA69 as seed ortholog is 99%.

Group of orthologs #1177. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 P.ramorum:201

F6RG08              	100.00%		H3GET3              	100.00%
Bootstrap support for F6RG08 as seed ortholog is 100%.
Bootstrap support for H3GET3 as seed ortholog is 100%.

Group of orthologs #1178. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 P.ramorum:201

F6Q4Z2              	100.00%		H3GPB1              	100.00%
Bootstrap support for F6Q4Z2 as seed ortholog is 100%.
Bootstrap support for H3GPB1 as seed ortholog is 100%.

Group of orthologs #1179. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 P.ramorum:201

F6X4T0              	100.00%		H3G9W8              	100.00%
Bootstrap support for F6X4T0 as seed ortholog is 100%.
Bootstrap support for H3G9W8 as seed ortholog is 100%.

Group of orthologs #1180. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 P.ramorum:201

F6YDG1              	100.00%		H3GLW2              	100.00%
Bootstrap support for F6YDG1 as seed ortholog is 100%.
Bootstrap support for H3GLW2 as seed ortholog is 100%.

Group of orthologs #1181. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 P.ramorum:201

H2XUL1              	100.00%		H3G5M6              	100.00%
Bootstrap support for H2XUL1 as seed ortholog is 93%.
Bootstrap support for H3G5M6 as seed ortholog is 100%.

Group of orthologs #1182. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 P.ramorum:201

H2Y0I5              	100.00%		H3G771              	100.00%
Bootstrap support for H2Y0I5 as seed ortholog is 100%.
Bootstrap support for H3G771 as seed ortholog is 100%.

Group of orthologs #1183. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 P.ramorum:201

F6YUN5              	100.00%		H3H394              	100.00%
Bootstrap support for F6YUN5 as seed ortholog is 100%.
Bootstrap support for H3H394 as seed ortholog is 100%.

Group of orthologs #1184. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 P.ramorum:201

H2XY13              	100.00%		H3H5Q9              	100.00%
Bootstrap support for H2XY13 as seed ortholog is 100%.
Bootstrap support for H3H5Q9 as seed ortholog is 100%.

Group of orthologs #1185. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 P.ramorum:17

F6QEZ7              	100.00%		H3GLX9              	100.00%
Bootstrap support for F6QEZ7 as seed ortholog is 100%.
Bootstrap support for H3GLX9 as seed ortholog is 73%.
Alternative seed ortholog is H3HCE7 (17 bits away from this cluster)

Group of orthologs #1186. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 P.ramorum:200

F6YG27              	100.00%		H3GM26              	100.00%
Bootstrap support for F6YG27 as seed ortholog is 100%.
Bootstrap support for H3GM26 as seed ortholog is 100%.

Group of orthologs #1187. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 P.ramorum:200

H2XMX2              	100.00%		H3GG19              	100.00%
Bootstrap support for H2XMX2 as seed ortholog is 100%.
Bootstrap support for H3GG19 as seed ortholog is 100%.

Group of orthologs #1188. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 P.ramorum:200

F7AER5              	100.00%		H3GQZ9              	100.00%
Bootstrap support for F7AER5 as seed ortholog is 100%.
Bootstrap support for H3GQZ9 as seed ortholog is 100%.

Group of orthologs #1189. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 P.ramorum:200

H2XL64              	100.00%		H3H6K8              	100.00%
Bootstrap support for H2XL64 as seed ortholog is 100%.
Bootstrap support for H3H6K8 as seed ortholog is 100%.

Group of orthologs #1190. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.ramorum:148

F6RGX1              	100.00%		H3GEL4              	100.00%
                    	       		H3GEL5              	22.78%
Bootstrap support for F6RGX1 as seed ortholog is 100%.
Bootstrap support for H3GEL4 as seed ortholog is 100%.

Group of orthologs #1191. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.ramorum:140

F6SU61              	100.00%		H3G849              	100.00%
Bootstrap support for F6SU61 as seed ortholog is 99%.
Bootstrap support for H3G849 as seed ortholog is 100%.

Group of orthologs #1192. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 P.ramorum:199

F6SSP8              	100.00%		H3GG58              	100.00%
Bootstrap support for F6SSP8 as seed ortholog is 100%.
Bootstrap support for H3GG58 as seed ortholog is 100%.

Group of orthologs #1193. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 P.ramorum:199

F6QLG8              	100.00%		H3GL40              	100.00%
Bootstrap support for F6QLG8 as seed ortholog is 100%.
Bootstrap support for H3GL40 as seed ortholog is 100%.

Group of orthologs #1194. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 P.ramorum:199

F6QHG7              	100.00%		H3GRN5              	100.00%
Bootstrap support for F6QHG7 as seed ortholog is 100%.
Bootstrap support for H3GRN5 as seed ortholog is 100%.

Group of orthologs #1195. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:29

F6SRA1              	100.00%		H3H030              	100.00%
Bootstrap support for F6SRA1 as seed ortholog is 95%.
Bootstrap support for H3H030 as seed ortholog is 76%.

Group of orthologs #1196. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 P.ramorum:199

F6YTY3              	100.00%		H3GNB7              	100.00%
Bootstrap support for F6YTY3 as seed ortholog is 100%.
Bootstrap support for H3GNB7 as seed ortholog is 100%.

Group of orthologs #1197. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 P.ramorum:37

F6RD37              	100.00%		H3G625              	100.00%
Bootstrap support for F6RD37 as seed ortholog is 100%.
Bootstrap support for H3G625 as seed ortholog is 85%.

Group of orthologs #1198. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 P.ramorum:198

F6YB67              	100.00%		H3G5K1              	100.00%
Bootstrap support for F6YB67 as seed ortholog is 100%.
Bootstrap support for H3G5K1 as seed ortholog is 100%.

Group of orthologs #1199. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 P.ramorum:198

F7A4X2              	100.00%		H3G7N8              	100.00%
Bootstrap support for F7A4X2 as seed ortholog is 100%.
Bootstrap support for H3G7N8 as seed ortholog is 100%.

Group of orthologs #1200. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.ramorum:104

H2XME3              	100.00%		H3G8F4              	100.00%
Bootstrap support for H2XME3 as seed ortholog is 99%.
Bootstrap support for H3G8F4 as seed ortholog is 100%.

Group of orthologs #1201. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 P.ramorum:198

F6URQ9              	100.00%		H3GZH0              	100.00%
Bootstrap support for F6URQ9 as seed ortholog is 100%.
Bootstrap support for H3GZH0 as seed ortholog is 100%.

Group of orthologs #1202. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 P.ramorum:197

F6RAN6              	100.00%		H3GTE2              	100.00%
Bootstrap support for F6RAN6 as seed ortholog is 100%.
Bootstrap support for H3GTE2 as seed ortholog is 100%.

Group of orthologs #1203. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.ramorum:137

F6RBK2              	100.00%		H3GU14              	100.00%
Bootstrap support for F6RBK2 as seed ortholog is 99%.
Bootstrap support for H3GU14 as seed ortholog is 99%.

Group of orthologs #1204. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.ramorum:196

F6VXA3              	100.00%		H3GG89              	100.00%
                    	       		H3H6U6              	65.69%
                    	       		H3GGG7              	54.14%
Bootstrap support for F6VXA3 as seed ortholog is 100%.
Bootstrap support for H3GG89 as seed ortholog is 100%.

Group of orthologs #1205. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.ramorum:196

F6VKM8              	100.00%		H3GUB3              	100.00%
Bootstrap support for F6VKM8 as seed ortholog is 91%.
Bootstrap support for H3GUB3 as seed ortholog is 100%.

Group of orthologs #1206. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.ramorum:94

H2XQ42              	100.00%		H3GCL9              	100.00%
Bootstrap support for H2XQ42 as seed ortholog is 87%.
Bootstrap support for H3GCL9 as seed ortholog is 99%.

Group of orthologs #1207. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.ramorum:196

F6W1Y5              	100.00%		H3GZW8              	100.00%
Bootstrap support for F6W1Y5 as seed ortholog is 100%.
Bootstrap support for H3GZW8 as seed ortholog is 100%.

Group of orthologs #1208. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.ramorum:196

H2XT70              	100.00%		H3GE58              	100.00%
Bootstrap support for H2XT70 as seed ortholog is 100%.
Bootstrap support for H3GE58 as seed ortholog is 100%.

Group of orthologs #1209. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.ramorum:101

F6ZNA8              	100.00%		H3HCY7              	100.00%
Bootstrap support for F6ZNA8 as seed ortholog is 100%.
Bootstrap support for H3HCY7 as seed ortholog is 98%.

Group of orthologs #1210. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.ramorum:114

H2XQB0              	100.00%		H3HBL5              	100.00%
Bootstrap support for H2XQB0 as seed ortholog is 100%.
Bootstrap support for H3HBL5 as seed ortholog is 99%.

Group of orthologs #1211. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.ramorum:195

F6V6F4              	100.00%		H3GKU1              	100.00%
Bootstrap support for F6V6F4 as seed ortholog is 100%.
Bootstrap support for H3GKU1 as seed ortholog is 100%.

Group of orthologs #1212. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.ramorum:150

F7AZA1              	100.00%		H3G9X3              	100.00%
Bootstrap support for F7AZA1 as seed ortholog is 100%.
Bootstrap support for H3G9X3 as seed ortholog is 100%.

Group of orthologs #1213. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.ramorum:195

F7BBV8              	100.00%		H3GE71              	100.00%
Bootstrap support for F7BBV8 as seed ortholog is 100%.
Bootstrap support for H3GE71 as seed ortholog is 100%.

Group of orthologs #1214. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.ramorum:195

F7B480              	100.00%		H3GKX8              	100.00%
Bootstrap support for F7B480 as seed ortholog is 100%.
Bootstrap support for H3GKX8 as seed ortholog is 100%.

Group of orthologs #1215. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.ramorum:124

H2Y3L9              	100.00%		H3G9W2              	100.00%
Bootstrap support for H2Y3L9 as seed ortholog is 100%.
Bootstrap support for H3G9W2 as seed ortholog is 100%.

Group of orthologs #1216. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.ramorum:195

F7AX37              	100.00%		H3GZK8              	100.00%
Bootstrap support for F7AX37 as seed ortholog is 100%.
Bootstrap support for H3GZK8 as seed ortholog is 100%.

Group of orthologs #1217. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 P.ramorum:194

F6SVN8              	100.00%		H3GDV6              	100.00%
                    	       		H3G5H6              	15.75%
Bootstrap support for F6SVN8 as seed ortholog is 100%.
Bootstrap support for H3GDV6 as seed ortholog is 100%.

Group of orthologs #1218. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 P.ramorum:194

F6Q9P1              	100.00%		H3GAS9              	100.00%
Bootstrap support for F6Q9P1 as seed ortholog is 100%.
Bootstrap support for H3GAS9 as seed ortholog is 100%.

Group of orthologs #1219. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 P.ramorum:194

F6YBU7              	100.00%		H3G8A3              	100.00%
Bootstrap support for F6YBU7 as seed ortholog is 100%.
Bootstrap support for H3G8A3 as seed ortholog is 100%.

Group of orthologs #1220. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 P.ramorum:194

F6VII3              	100.00%		H3GG33              	100.00%
Bootstrap support for F6VII3 as seed ortholog is 100%.
Bootstrap support for H3GG33 as seed ortholog is 100%.

Group of orthologs #1221. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 P.ramorum:194

F6SNM2              	100.00%		H3GMY0              	100.00%
Bootstrap support for F6SNM2 as seed ortholog is 100%.
Bootstrap support for H3GMY0 as seed ortholog is 100%.

Group of orthologs #1222. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 P.ramorum:194

H2XPA7              	100.00%		H3GAM9              	100.00%
Bootstrap support for H2XPA7 as seed ortholog is 100%.
Bootstrap support for H3GAM9 as seed ortholog is 100%.

Group of orthologs #1223. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.ramorum:12

F6X7T3              	100.00%		H3HBB2              	100.00%
F6Y178              	47.81%		H3GDG0              	5.92%
F6U1B1              	28.54%		H3GCB1              	5.35%
Bootstrap support for F6X7T3 as seed ortholog is 100%.
Bootstrap support for H3HBB2 as seed ortholog is 49%.
Alternative seed ortholog is H3GSU1 (12 bits away from this cluster)

Group of orthologs #1224. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.ramorum:193

F6SY86              	100.00%		H3GBZ8              	100.00%
Bootstrap support for F6SY86 as seed ortholog is 97%.
Bootstrap support for H3GBZ8 as seed ortholog is 100%.

Group of orthologs #1225. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.ramorum:193

F6Y3K6              	100.00%		H3GH25              	100.00%
Bootstrap support for F6Y3K6 as seed ortholog is 100%.
Bootstrap support for H3GH25 as seed ortholog is 100%.

Group of orthologs #1226. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 P.ramorum:193

F6WYI2              	100.00%		H3GNC9              	100.00%
Bootstrap support for F6WYI2 as seed ortholog is 76%.
Bootstrap support for H3GNC9 as seed ortholog is 100%.

Group of orthologs #1227. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.ramorum:11

F6QEH2              	100.00%		H3HAS1              	100.00%
Bootstrap support for F6QEH2 as seed ortholog is 99%.
Bootstrap support for H3HAS1 as seed ortholog is 53%.
Alternative seed ortholog is H3HDE3 (11 bits away from this cluster)

Group of orthologs #1228. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.ramorum:43

F6R0U8              	100.00%		H3HAQ4              	100.00%
Bootstrap support for F6R0U8 as seed ortholog is 98%.
Bootstrap support for H3HAQ4 as seed ortholog is 95%.

Group of orthologs #1229. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.ramorum:193

F6ZWS5              	100.00%		H3GW27              	100.00%
Bootstrap support for F6ZWS5 as seed ortholog is 100%.
Bootstrap support for H3GW27 as seed ortholog is 100%.

Group of orthologs #1230. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 P.ramorum:192

H2XLA0              	100.00%		H3G7D0              	100.00%
H2Y1X0              	34.09%		H3GUX7              	89.64%
Bootstrap support for H2XLA0 as seed ortholog is 100%.
Bootstrap support for H3G7D0 as seed ortholog is 100%.

Group of orthologs #1231. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 P.ramorum:192

F6WWW9              	100.00%		H3H550              	100.00%
                    	       		H3GXF3              	48.30%
Bootstrap support for F6WWW9 as seed ortholog is 100%.
Bootstrap support for H3H550 as seed ortholog is 100%.

Group of orthologs #1232. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:121

H2XMB6              	100.00%		H3G5G1              	100.00%
Bootstrap support for H2XMB6 as seed ortholog is 99%.
Bootstrap support for H3G5G1 as seed ortholog is 100%.

Group of orthologs #1233. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.ramorum:191

F6THX7              	100.00%		H3GWZ9              	100.00%
Bootstrap support for F6THX7 as seed ortholog is 100%.
Bootstrap support for H3GWZ9 as seed ortholog is 100%.

Group of orthologs #1234. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.ramorum:191

F6UGF1              	100.00%		H3GWJ4              	100.00%
Bootstrap support for F6UGF1 as seed ortholog is 98%.
Bootstrap support for H3GWJ4 as seed ortholog is 100%.

Group of orthologs #1235. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 P.ramorum:191

F6W9T5              	100.00%		H3GU30              	100.00%
Bootstrap support for F6W9T5 as seed ortholog is 90%.
Bootstrap support for H3GU30 as seed ortholog is 100%.

Group of orthologs #1236. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.ramorum:191

F6YT91              	100.00%		H3GSU3              	100.00%
Bootstrap support for F6YT91 as seed ortholog is 100%.
Bootstrap support for H3GSU3 as seed ortholog is 100%.

Group of orthologs #1237. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.ramorum:79

F6V6N1              	100.00%		H3H548              	100.00%
Bootstrap support for F6V6N1 as seed ortholog is 100%.
Bootstrap support for H3H548 as seed ortholog is 90%.

Group of orthologs #1238. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.ramorum:191

F6Y043              	100.00%		H3H248              	100.00%
Bootstrap support for F6Y043 as seed ortholog is 98%.
Bootstrap support for H3H248 as seed ortholog is 100%.

Group of orthologs #1239. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.ramorum:191

H2Y1H7              	100.00%		H3GH52              	100.00%
Bootstrap support for H2Y1H7 as seed ortholog is 100%.
Bootstrap support for H3GH52 as seed ortholog is 100%.

Group of orthologs #1240. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.ramorum:191

F6ZA03              	100.00%		H3H5G1              	100.00%
Bootstrap support for F6ZA03 as seed ortholog is 100%.
Bootstrap support for H3H5G1 as seed ortholog is 100%.

Group of orthologs #1241. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.ramorum:191

H2XRE3              	100.00%		H3GWG2              	100.00%
Bootstrap support for H2XRE3 as seed ortholog is 100%.
Bootstrap support for H3GWG2 as seed ortholog is 100%.

Group of orthologs #1242. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.ramorum:190

F6T310              	100.00%		H3GDX2              	100.00%
F6VUN5              	100.00%		
Bootstrap support for F6T310 as seed ortholog is 100%.
Bootstrap support for F6VUN5 as seed ortholog is 100%.
Bootstrap support for H3GDX2 as seed ortholog is 100%.

Group of orthologs #1243. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.ramorum:190

F6RQS4              	100.00%		H3GFX6              	100.00%
Bootstrap support for F6RQS4 as seed ortholog is 100%.
Bootstrap support for H3GFX6 as seed ortholog is 100%.

Group of orthologs #1244. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.ramorum:190

C4B8X0              	100.00%		H3GNB4              	100.00%
Bootstrap support for C4B8X0 as seed ortholog is 100%.
Bootstrap support for H3GNB4 as seed ortholog is 100%.

Group of orthologs #1245. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.ramorum:190

F6PMD1              	100.00%		H3GWU4              	100.00%
Bootstrap support for F6PMD1 as seed ortholog is 100%.
Bootstrap support for H3GWU4 as seed ortholog is 100%.

Group of orthologs #1246. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.ramorum:190

F7B3P4              	100.00%		H3G763              	100.00%
Bootstrap support for F7B3P4 as seed ortholog is 100%.
Bootstrap support for H3G763 as seed ortholog is 100%.

Group of orthologs #1247. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.ramorum:190

F6SSS9              	100.00%		H3GV87              	100.00%
Bootstrap support for F6SSS9 as seed ortholog is 100%.
Bootstrap support for H3GV87 as seed ortholog is 100%.

Group of orthologs #1248. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.ramorum:190

F7A328              	100.00%		H3GGV5              	100.00%
Bootstrap support for F7A328 as seed ortholog is 100%.
Bootstrap support for H3GGV5 as seed ortholog is 100%.

Group of orthologs #1249. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.ramorum:190

F6ZU53              	100.00%		H3H3N4              	100.00%
Bootstrap support for F6ZU53 as seed ortholog is 100%.
Bootstrap support for H3H3N4 as seed ortholog is 100%.

Group of orthologs #1250. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.ramorum:190

F6ZN66              	100.00%		H3HCD6              	100.00%
Bootstrap support for F6ZN66 as seed ortholog is 100%.
Bootstrap support for H3HCD6 as seed ortholog is 100%.

Group of orthologs #1251. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 P.ramorum:189

F6VF91              	100.00%		H3GXV0              	100.00%
Bootstrap support for F6VF91 as seed ortholog is 100%.
Bootstrap support for H3GXV0 as seed ortholog is 100%.

Group of orthologs #1252. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 P.ramorum:189

H2XMC6              	100.00%		H3H097              	100.00%
Bootstrap support for H2XMC6 as seed ortholog is 100%.
Bootstrap support for H3H097 as seed ortholog is 100%.

Group of orthologs #1253. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 P.ramorum:23

F6PR16              	100.00%		H3GBW6              	100.00%
Bootstrap support for F6PR16 as seed ortholog is 78%.
Bootstrap support for H3GBW6 as seed ortholog is 23%.
Alternative seed ortholog is H3G903 (23 bits away from this cluster)

Group of orthologs #1254. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.ramorum:188

F7A2R6              	100.00%		H3GEA6              	100.00%
Bootstrap support for F7A2R6 as seed ortholog is 100%.
Bootstrap support for H3GEA6 as seed ortholog is 100%.

Group of orthologs #1255. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.ramorum:188

F7BP62              	100.00%		H3GBK4              	100.00%
Bootstrap support for F7BP62 as seed ortholog is 100%.
Bootstrap support for H3GBK4 as seed ortholog is 100%.

Group of orthologs #1256. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.ramorum:188

F6T8R8              	100.00%		H3HB20              	100.00%
Bootstrap support for F6T8R8 as seed ortholog is 100%.
Bootstrap support for H3HB20 as seed ortholog is 100%.

Group of orthologs #1257. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 P.ramorum:188

H2XQ34              	100.00%		H3GNV8              	100.00%
Bootstrap support for H2XQ34 as seed ortholog is 99%.
Bootstrap support for H3GNV8 as seed ortholog is 100%.

Group of orthologs #1258. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.ramorum:187

H2XZ54              	100.00%		H3GMV0              	100.00%
F6Y5Q3              	20.45%		
Bootstrap support for H2XZ54 as seed ortholog is 100%.
Bootstrap support for H3GMV0 as seed ortholog is 100%.

Group of orthologs #1259. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.ramorum:187

F6SK91              	100.00%		H3G9R6              	100.00%
Bootstrap support for F6SK91 as seed ortholog is 100%.
Bootstrap support for H3G9R6 as seed ortholog is 100%.

Group of orthologs #1260. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 P.ramorum:101

F6TMT5              	100.00%		H3GA22              	100.00%
Bootstrap support for F6TMT5 as seed ortholog is 64%.
Alternative seed ortholog is F6XWG9 (10 bits away from this cluster)
Bootstrap support for H3GA22 as seed ortholog is 99%.

Group of orthologs #1261. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.ramorum:126

F6YLC1              	100.00%		H3G7A8              	100.00%
Bootstrap support for F6YLC1 as seed ortholog is 100%.
Bootstrap support for H3G7A8 as seed ortholog is 100%.

Group of orthologs #1262. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.ramorum:187

F7B3M4              	100.00%		H3G7K5              	100.00%
Bootstrap support for F7B3M4 as seed ortholog is 100%.
Bootstrap support for H3G7K5 as seed ortholog is 100%.

Group of orthologs #1263. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.ramorum:187

H2Y1Y8              	100.00%		H3G962              	100.00%
Bootstrap support for H2Y1Y8 as seed ortholog is 100%.
Bootstrap support for H3G962 as seed ortholog is 100%.

Group of orthologs #1264. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 P.ramorum:186

F6S2C6              	100.00%		H3GQX2              	100.00%
Bootstrap support for F6S2C6 as seed ortholog is 100%.
Bootstrap support for H3GQX2 as seed ortholog is 100%.

Group of orthologs #1265. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.ramorum:134

F6WUC3              	100.00%		H3GFI2              	100.00%
Bootstrap support for F6WUC3 as seed ortholog is 99%.
Bootstrap support for H3GFI2 as seed ortholog is 99%.

Group of orthologs #1266. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 P.ramorum:186

F6X0F3              	100.00%		H3GGV9              	100.00%
Bootstrap support for F6X0F3 as seed ortholog is 100%.
Bootstrap support for H3GGV9 as seed ortholog is 100%.

Group of orthologs #1267. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 P.ramorum:186

F6X1E1              	100.00%		H3GHG9              	100.00%
Bootstrap support for F6X1E1 as seed ortholog is 100%.
Bootstrap support for H3GHG9 as seed ortholog is 100%.

Group of orthologs #1268. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.ramorum:186

H2XSH7              	100.00%		H3G9S4              	100.00%
Bootstrap support for H2XSH7 as seed ortholog is 99%.
Bootstrap support for H3G9S4 as seed ortholog is 100%.

Group of orthologs #1269. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.ramorum:185

F6QI05              	100.00%		H3GAL3              	100.00%
                    	       		H3GAL2              	87.91%
Bootstrap support for F6QI05 as seed ortholog is 100%.
Bootstrap support for H3GAL3 as seed ortholog is 100%.

Group of orthologs #1270. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.ramorum:185

F6PPI4              	100.00%		H3GHL0              	100.00%
Bootstrap support for F6PPI4 as seed ortholog is 100%.
Bootstrap support for H3GHL0 as seed ortholog is 100%.

Group of orthologs #1271. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.ramorum:185

F6UUL4              	100.00%		H3GAV6              	100.00%
Bootstrap support for F6UUL4 as seed ortholog is 100%.
Bootstrap support for H3GAV6 as seed ortholog is 100%.

Group of orthologs #1272. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.ramorum:185

F6PKJ4              	100.00%		H3GMP6              	100.00%
Bootstrap support for F6PKJ4 as seed ortholog is 100%.
Bootstrap support for H3GMP6 as seed ortholog is 100%.

Group of orthologs #1273. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.ramorum:76

F6QBM2              	100.00%		H3GMB5              	100.00%
Bootstrap support for F6QBM2 as seed ortholog is 100%.
Bootstrap support for H3GMB5 as seed ortholog is 99%.

Group of orthologs #1274. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 P.ramorum:34

F6X3X4              	100.00%		H3G8W4              	100.00%
Bootstrap support for F6X3X4 as seed ortholog is 85%.
Bootstrap support for H3G8W4 as seed ortholog is 84%.

Group of orthologs #1275. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.ramorum:185

F6XTZ6              	100.00%		H3G7X3              	100.00%
Bootstrap support for F6XTZ6 as seed ortholog is 100%.
Bootstrap support for H3G7X3 as seed ortholog is 100%.

Group of orthologs #1276. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.ramorum:185

F6ZSB0              	100.00%		H3G6E8              	100.00%
Bootstrap support for F6ZSB0 as seed ortholog is 100%.
Bootstrap support for H3G6E8 as seed ortholog is 100%.

Group of orthologs #1277. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.ramorum:77

F6RD78              	100.00%		H3GSC6              	100.00%
Bootstrap support for F6RD78 as seed ortholog is 92%.
Bootstrap support for H3GSC6 as seed ortholog is 97%.

Group of orthologs #1278. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.ramorum:185

F6ZDB4              	100.00%		H3GE46              	100.00%
Bootstrap support for F6ZDB4 as seed ortholog is 100%.
Bootstrap support for H3GE46 as seed ortholog is 100%.

Group of orthologs #1279. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.ramorum:185

F6ZF56              	100.00%		H3GGU8              	100.00%
Bootstrap support for F6ZF56 as seed ortholog is 100%.
Bootstrap support for H3GGU8 as seed ortholog is 100%.

Group of orthologs #1280. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.ramorum:185

F7ASX2              	100.00%		H3GTA2              	100.00%
Bootstrap support for F7ASX2 as seed ortholog is 100%.
Bootstrap support for H3GTA2 as seed ortholog is 100%.

Group of orthologs #1281. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.ramorum:30

H2XY03              	100.00%		H3GK34              	100.00%
Bootstrap support for H2XY03 as seed ortholog is 100%.
Bootstrap support for H3GK34 as seed ortholog is 73%.
Alternative seed ortholog is H3GB43 (30 bits away from this cluster)

Group of orthologs #1282. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 P.ramorum:184

F6V9A1              	100.00%		H3GAY1              	100.00%
                    	       		H3GAD4              	84.06%
Bootstrap support for F6V9A1 as seed ortholog is 100%.
Bootstrap support for H3GAY1 as seed ortholog is 100%.

Group of orthologs #1283. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 P.ramorum:40

F6SKP5              	100.00%		H3H1Q6              	100.00%
                    	       		H3GUF2              	13.69%
Bootstrap support for F6SKP5 as seed ortholog is 100%.
Bootstrap support for H3H1Q6 as seed ortholog is 81%.

Group of orthologs #1284. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 P.ramorum:184

F6WUG3              	100.00%		H3G9D9              	100.00%
Bootstrap support for F6WUG3 as seed ortholog is 100%.
Bootstrap support for H3G9D9 as seed ortholog is 100%.

Group of orthologs #1285. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:98

F6UXG6              	100.00%		H3GYX6              	100.00%
Bootstrap support for F6UXG6 as seed ortholog is 99%.
Bootstrap support for H3GYX6 as seed ortholog is 99%.

Group of orthologs #1286. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 P.ramorum:184

H2Y0K3              	100.00%		H3GEQ7              	100.00%
Bootstrap support for H2Y0K3 as seed ortholog is 100%.
Bootstrap support for H3GEQ7 as seed ortholog is 100%.

Group of orthologs #1287. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 P.ramorum:184

H2Y3A3              	100.00%		H3GTI3              	100.00%
Bootstrap support for H2Y3A3 as seed ortholog is 100%.
Bootstrap support for H3GTI3 as seed ortholog is 100%.

Group of orthologs #1288. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.ramorum:183

F6Q021              	100.00%		H3G8N7              	100.00%
Bootstrap support for F6Q021 as seed ortholog is 100%.
Bootstrap support for H3G8N7 as seed ortholog is 100%.

Group of orthologs #1289. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.ramorum:183

H2XSX6              	100.00%		H3G7A1              	100.00%
Bootstrap support for H2XSX6 as seed ortholog is 100%.
Bootstrap support for H3G7A1 as seed ortholog is 100%.

Group of orthologs #1290. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.ramorum:183

F6PKA1              	100.00%		H3HD92              	100.00%
Bootstrap support for F6PKA1 as seed ortholog is 100%.
Bootstrap support for H3HD92 as seed ortholog is 100%.

Group of orthologs #1291. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.ramorum:128

H2XSL4              	100.00%		H3HAT4              	100.00%
                    	       		H3GC86              	58.96%
                    	       		H3GC88              	34.04%
                    	       		H3GC97              	19.87%
Bootstrap support for H2XSL4 as seed ortholog is 100%.
Bootstrap support for H3HAT4 as seed ortholog is 99%.

Group of orthologs #1292. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.ramorum:182

F7BH38              	100.00%		H3H7R5              	100.00%
F6UCD8              	15.05%		
Bootstrap support for F7BH38 as seed ortholog is 100%.
Bootstrap support for H3H7R5 as seed ortholog is 100%.

Group of orthologs #1293. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.ramorum:182

H2XVN4              	100.00%		H3GBC5              	100.00%
Bootstrap support for H2XVN4 as seed ortholog is 100%.
Bootstrap support for H3GBC5 as seed ortholog is 100%.

Group of orthologs #1294. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.ramorum:182

F6R982              	100.00%		H3HD53              	100.00%
Bootstrap support for F6R982 as seed ortholog is 100%.
Bootstrap support for H3HD53 as seed ortholog is 100%.

Group of orthologs #1295. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.ramorum:46

F6ZUD7              	100.00%		H3GXF1              	100.00%
Bootstrap support for F6ZUD7 as seed ortholog is 97%.
Bootstrap support for H3GXF1 as seed ortholog is 85%.

Group of orthologs #1296. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.ramorum:182

H2XZK6              	100.00%		H3GVM4              	100.00%
Bootstrap support for H2XZK6 as seed ortholog is 100%.
Bootstrap support for H3GVM4 as seed ortholog is 100%.

Group of orthologs #1297. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 P.ramorum:181

F6RXW9              	100.00%		H3G953              	100.00%
                    	       		H3G954              	98.68%
Bootstrap support for F6RXW9 as seed ortholog is 100%.
Bootstrap support for H3G953 as seed ortholog is 100%.

Group of orthologs #1298. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.ramorum:78

F7ADF2              	100.00%		H3G8P5              	100.00%
H2XQS5              	100.00%		
Bootstrap support for F7ADF2 as seed ortholog is 99%.
Bootstrap support for H2XQS5 as seed ortholog is 99%.
Bootstrap support for H3G8P5 as seed ortholog is 99%.

Group of orthologs #1299. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.ramorum:181

F6ZIP1              	100.00%		H3H0U7              	100.00%
                    	       		H3HAE0              	83.59%
Bootstrap support for F6ZIP1 as seed ortholog is 99%.
Bootstrap support for H3H0U7 as seed ortholog is 100%.

Group of orthologs #1300. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 P.ramorum:181

F7AEP2              	100.00%		H3G610              	100.00%
Bootstrap support for F7AEP2 as seed ortholog is 100%.
Bootstrap support for H3G610 as seed ortholog is 100%.

Group of orthologs #1301. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 P.ramorum:34

F6ZP71              	100.00%		H3GDW0              	100.00%
Bootstrap support for F6ZP71 as seed ortholog is 66%.
Alternative seed ortholog is F7API1 (15 bits away from this cluster)
Bootstrap support for H3GDW0 as seed ortholog is 81%.

Group of orthologs #1302. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 P.ramorum:16

H2XKN2              	100.00%		H3GBF0              	100.00%
Bootstrap support for H2XKN2 as seed ortholog is 72%.
Alternative seed ortholog is F6W872 (20 bits away from this cluster)
Bootstrap support for H3GBF0 as seed ortholog is 65%.
Alternative seed ortholog is H3HCA0 (16 bits away from this cluster)

Group of orthologs #1303. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 P.ramorum:181

H2XSU1              	100.00%		H3G8U9              	100.00%
Bootstrap support for H2XSU1 as seed ortholog is 100%.
Bootstrap support for H3G8U9 as seed ortholog is 100%.

Group of orthologs #1304. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 P.ramorum:181

F6XA93              	100.00%		H3H2T6              	100.00%
Bootstrap support for F6XA93 as seed ortholog is 100%.
Bootstrap support for H3H2T6 as seed ortholog is 100%.

Group of orthologs #1305. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 P.ramorum:52

F6YSB9              	100.00%		H3H388              	100.00%
Bootstrap support for F6YSB9 as seed ortholog is 100%.
Bootstrap support for H3H388 as seed ortholog is 89%.

Group of orthologs #1306. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.ramorum:93

F6Z9G9              	100.00%		H3HCG9              	100.00%
Bootstrap support for F6Z9G9 as seed ortholog is 99%.
Bootstrap support for H3HCG9 as seed ortholog is 99%.

Group of orthologs #1307. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.ramorum:180

F6Q2J0              	100.00%		H3GWP7              	100.00%
F6SM21              	23.46%		
F6YPX6              	13.62%		
F7AKC9              	12.13%		
H2XSR0              	10.14%		
F6XRF6              	6.66%		
F7BC57              	6.56%		
F6Y050              	6.06%		
H2XV00              	5.86%		
F6ZXE7              	5.47%		
F6XX55              	5.27%		
Bootstrap support for F6Q2J0 as seed ortholog is 87%.
Bootstrap support for H3GWP7 as seed ortholog is 100%.

Group of orthologs #1308. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 P.ramorum:180

F7BQ75              	100.00%		H3GBS7              	100.00%
                    	       		H3GBT1              	31.17%
Bootstrap support for F7BQ75 as seed ortholog is 100%.
Bootstrap support for H3GBS7 as seed ortholog is 100%.

Group of orthologs #1309. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 P.ramorum:180

F6TAK3              	100.00%		H3GN50              	100.00%
Bootstrap support for F6TAK3 as seed ortholog is 100%.
Bootstrap support for H3GN50 as seed ortholog is 100%.

Group of orthologs #1310. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 P.ramorum:72

F6U7X2              	100.00%		H3GYT1              	100.00%
Bootstrap support for F6U7X2 as seed ortholog is 56%.
Alternative seed ortholog is F6WMZ2 (27 bits away from this cluster)
Bootstrap support for H3GYT1 as seed ortholog is 93%.

Group of orthologs #1311. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 P.ramorum:180

F6Y8Y8              	100.00%		H3HB24              	100.00%
Bootstrap support for F6Y8Y8 as seed ortholog is 100%.
Bootstrap support for H3HB24 as seed ortholog is 100%.

Group of orthologs #1312. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 P.ramorum:52

H2XRK7              	100.00%		H3HC35              	100.00%
Bootstrap support for H2XRK7 as seed ortholog is 100%.
Bootstrap support for H3HC35 as seed ortholog is 96%.

Group of orthologs #1313. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.ramorum:179

F7AEB8              	100.00%		H3GCK9              	100.00%
                    	       		H3HAZ0              	59.97%
Bootstrap support for F7AEB8 as seed ortholog is 92%.
Bootstrap support for H3GCK9 as seed ortholog is 100%.

Group of orthologs #1314. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.ramorum:179

F6QE62              	100.00%		H3GH48              	100.00%
Bootstrap support for F6QE62 as seed ortholog is 100%.
Bootstrap support for H3GH48 as seed ortholog is 100%.

Group of orthologs #1315. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.ramorum:179

F6UXH9              	100.00%		H3GBE8              	100.00%
Bootstrap support for F6UXH9 as seed ortholog is 100%.
Bootstrap support for H3GBE8 as seed ortholog is 100%.

Group of orthologs #1316. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.ramorum:80

F6SM85              	100.00%		H3GU73              	100.00%
Bootstrap support for F6SM85 as seed ortholog is 100%.
Bootstrap support for H3GU73 as seed ortholog is 75%.

Group of orthologs #1317. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.ramorum:84

F6UE58              	100.00%		H3GRT9              	100.00%
Bootstrap support for F6UE58 as seed ortholog is 100%.
Bootstrap support for H3GRT9 as seed ortholog is 96%.

Group of orthologs #1318. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.ramorum:179

F6ZQX9              	100.00%		H3H534              	100.00%
Bootstrap support for F6ZQX9 as seed ortholog is 100%.
Bootstrap support for H3H534 as seed ortholog is 100%.

Group of orthologs #1319. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 P.ramorum:178

H2XQH0              	100.00%		H3G9U3              	100.00%
F6ZRC6              	42.14%		H3G9U6              	61.17%
H2XUY3              	24.95%		H3GAS3              	43.35%
F6WI49              	10.69%		H3GME0              	42.82%
                    	       		H3G908              	41.76%
Bootstrap support for H2XQH0 as seed ortholog is 81%.
Bootstrap support for H3G9U3 as seed ortholog is 100%.

Group of orthologs #1320. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.ramorum:178

F6QSC7              	100.00%		H3H379              	100.00%
                    	       		H3G567              	46.98%
Bootstrap support for F6QSC7 as seed ortholog is 100%.
Bootstrap support for H3H379 as seed ortholog is 100%.

Group of orthologs #1321. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.ramorum:89

F6YQV7              	100.00%		H3GQ05              	100.00%
F6ZVE1              	18.55%		
Bootstrap support for F6YQV7 as seed ortholog is 100%.
Bootstrap support for H3GQ05 as seed ortholog is 94%.

Group of orthologs #1322. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.ramorum:131

H2XZC9              	100.00%		H3GGS9              	100.00%
                    	       		H3HCV2              	6.46%
Bootstrap support for H2XZC9 as seed ortholog is 90%.
Bootstrap support for H3GGS9 as seed ortholog is 99%.

Group of orthologs #1323. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.ramorum:178

F6TB52              	100.00%		H3G8X7              	100.00%
Bootstrap support for F6TB52 as seed ortholog is 100%.
Bootstrap support for H3G8X7 as seed ortholog is 100%.

Group of orthologs #1324. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.ramorum:178

F6TSS8              	100.00%		H3GP76              	100.00%
Bootstrap support for F6TSS8 as seed ortholog is 100%.
Bootstrap support for H3GP76 as seed ortholog is 100%.

Group of orthologs #1325. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.ramorum:178

F7B0F3              	100.00%		H3GCL0              	100.00%
Bootstrap support for F7B0F3 as seed ortholog is 100%.
Bootstrap support for H3GCL0 as seed ortholog is 100%.

Group of orthologs #1326. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.ramorum:2

F6XML9              	100.00%		H3GR73              	100.00%
Bootstrap support for F6XML9 as seed ortholog is 100%.
Bootstrap support for H3GR73 as seed ortholog is 51%.
Alternative seed ortholog is H3G8R0 (2 bits away from this cluster)

Group of orthologs #1327. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.ramorum:10

F6RLP1              	100.00%		H3H586              	100.00%
Bootstrap support for F6RLP1 as seed ortholog is 100%.
Bootstrap support for H3H586 as seed ortholog is 48%.
Alternative seed ortholog is H3H2W1 (10 bits away from this cluster)

Group of orthologs #1328. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 P.ramorum:89

H2XWT2              	100.00%		H3G6G5              	100.00%
Bootstrap support for H2XWT2 as seed ortholog is 99%.
Bootstrap support for H3G6G5 as seed ortholog is 100%.

Group of orthologs #1329. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:99

Q2PEE1              	100.00%		H3GAG4              	100.00%
Bootstrap support for Q2PEE1 as seed ortholog is 100%.
Bootstrap support for H3GAG4 as seed ortholog is 100%.

Group of orthologs #1330. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.ramorum:178

F6VK85              	100.00%		H3HC67              	100.00%
Bootstrap support for F6VK85 as seed ortholog is 100%.
Bootstrap support for H3HC67 as seed ortholog is 100%.

Group of orthologs #1331. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 P.ramorum:177

H2XZ04              	100.00%		H3GSN9              	100.00%
                    	       		H3GSM9              	57.30%
                    	       		H3GSN0              	52.13%
                    	       		H3GSN3              	51.42%
                    	       		H3GSN1              	46.04%
                    	       		H3GSN2              	39.76%
Bootstrap support for H2XZ04 as seed ortholog is 100%.
Bootstrap support for H3GSN9 as seed ortholog is 100%.

Group of orthologs #1332. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 P.ramorum:177

F6RLX1              	100.00%		H3G6D5              	100.00%
Bootstrap support for F6RLX1 as seed ortholog is 100%.
Bootstrap support for H3G6D5 as seed ortholog is 100%.

Group of orthologs #1333. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 P.ramorum:177

F6QRX3              	100.00%		H3GNW4              	100.00%
Bootstrap support for F6QRX3 as seed ortholog is 100%.
Bootstrap support for H3GNW4 as seed ortholog is 100%.

Group of orthologs #1334. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 P.ramorum:177

F6ZIF8              	100.00%		H3GFJ5              	100.00%
Bootstrap support for F6ZIF8 as seed ortholog is 100%.
Bootstrap support for H3GFJ5 as seed ortholog is 100%.

Group of orthologs #1335. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.ramorum:59

F6YU98              	100.00%		H3GLF1              	100.00%
Bootstrap support for F6YU98 as seed ortholog is 92%.
Bootstrap support for H3GLF1 as seed ortholog is 98%.

Group of orthologs #1336. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 P.ramorum:43

Q4H383              	100.00%		H3GTD1              	100.00%
H2XJG5              	7.28%		
Bootstrap support for Q4H383 as seed ortholog is 76%.
Bootstrap support for H3GTD1 as seed ortholog is 88%.

Group of orthologs #1337. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.ramorum:176

F6PL73              	100.00%		H3G8P3              	100.00%
Bootstrap support for F6PL73 as seed ortholog is 100%.
Bootstrap support for H3G8P3 as seed ortholog is 100%.

Group of orthologs #1338. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.ramorum:176

F6R2P7              	100.00%		H3GE78              	100.00%
Bootstrap support for F6R2P7 as seed ortholog is 100%.
Bootstrap support for H3GE78 as seed ortholog is 100%.

Group of orthologs #1339. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.ramorum:176

F6R4F4              	100.00%		H3GGK3              	100.00%
Bootstrap support for F6R4F4 as seed ortholog is 100%.
Bootstrap support for H3GGK3 as seed ortholog is 100%.

Group of orthologs #1340. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 P.ramorum:83

F6WJS0              	100.00%		H3G759              	100.00%
Bootstrap support for F6WJS0 as seed ortholog is 99%.
Bootstrap support for H3G759 as seed ortholog is 99%.

Group of orthologs #1341. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.ramorum:114

F6YF45              	100.00%		H3G5G4              	100.00%
Bootstrap support for F6YF45 as seed ortholog is 100%.
Bootstrap support for H3G5G4 as seed ortholog is 100%.

Group of orthologs #1342. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 P.ramorum:175

F6PM63              	100.00%		H3G6Z2              	100.00%
Bootstrap support for F6PM63 as seed ortholog is 100%.
Bootstrap support for H3G6Z2 as seed ortholog is 100%.

Group of orthologs #1343. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.ramorum:175

F6Q7P2              	100.00%		H3GNT3              	100.00%
Bootstrap support for F6Q7P2 as seed ortholog is 99%.
Bootstrap support for H3GNT3 as seed ortholog is 100%.

Group of orthologs #1344. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 P.ramorum:175

F6YIJ5              	100.00%		H3GMZ0              	100.00%
Bootstrap support for F6YIJ5 as seed ortholog is 100%.
Bootstrap support for H3GMZ0 as seed ortholog is 100%.

Group of orthologs #1345. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 P.ramorum:175

F7B690              	100.00%		H3GJP3              	100.00%
Bootstrap support for F7B690 as seed ortholog is 99%.
Bootstrap support for H3GJP3 as seed ortholog is 100%.

Group of orthologs #1346. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 P.ramorum:175

H2XYS7              	100.00%		H3GXE1              	100.00%
Bootstrap support for H2XYS7 as seed ortholog is 100%.
Bootstrap support for H3GXE1 as seed ortholog is 100%.

Group of orthologs #1347. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.ramorum:174

F6UU89              	100.00%		H3G748              	100.00%
                    	       		H3G5V0              	36.42%
                    	       		H3G749              	13.58%
Bootstrap support for F6UU89 as seed ortholog is 100%.
Bootstrap support for H3G748 as seed ortholog is 100%.

Group of orthologs #1348. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.ramorum:174

F6PLY6              	100.00%		H3GCB3              	100.00%
Bootstrap support for F6PLY6 as seed ortholog is 100%.
Bootstrap support for H3GCB3 as seed ortholog is 100%.

Group of orthologs #1349. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.ramorum:174

F6R0P0              	100.00%		H3GAS8              	100.00%
Bootstrap support for F6R0P0 as seed ortholog is 100%.
Bootstrap support for H3GAS8 as seed ortholog is 100%.

Group of orthologs #1350. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.ramorum:84

F6XX66              	100.00%		H3GHS0              	100.00%
Bootstrap support for F6XX66 as seed ortholog is 100%.
Bootstrap support for H3GHS0 as seed ortholog is 99%.

Group of orthologs #1351. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.ramorum:174

F6QR08              	100.00%		H3GYG9              	100.00%
Bootstrap support for F6QR08 as seed ortholog is 100%.
Bootstrap support for H3GYG9 as seed ortholog is 100%.

Group of orthologs #1352. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 P.ramorum:174

F6T453              	100.00%		H3GVN3              	100.00%
Bootstrap support for F6T453 as seed ortholog is 90%.
Bootstrap support for H3GVN3 as seed ortholog is 100%.

Group of orthologs #1353. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.ramorum:174

F7B4P3              	100.00%		H3GIP8              	100.00%
Bootstrap support for F7B4P3 as seed ortholog is 100%.
Bootstrap support for H3GIP8 as seed ortholog is 100%.

Group of orthologs #1354. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 P.ramorum:173

F6Z145              	100.00%		H3GE37              	100.00%
F7B1Z2              	40.38%		
F6TNN9              	7.50%		
Bootstrap support for F6Z145 as seed ortholog is 100%.
Bootstrap support for H3GE37 as seed ortholog is 100%.

Group of orthologs #1355. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 P.ramorum:115

F6RCH7              	100.00%		H3GDA4              	100.00%
Bootstrap support for F6RCH7 as seed ortholog is 100%.
Bootstrap support for H3GDA4 as seed ortholog is 100%.

Group of orthologs #1356. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 P.ramorum:75

H2XLK7              	100.00%		H3GDE6              	100.00%
Bootstrap support for H2XLK7 as seed ortholog is 90%.
Bootstrap support for H3GDE6 as seed ortholog is 99%.

Group of orthologs #1357. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.ramorum:72

F6WAY8              	100.00%		H3HB56              	100.00%
Bootstrap support for F6WAY8 as seed ortholog is 95%.
Bootstrap support for H3HB56 as seed ortholog is 92%.

Group of orthologs #1358. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.ramorum:73

H2XPK9              	100.00%		H3GHB6              	100.00%
F6X9C7              	45.60%		
H2XY34              	37.42%		
F6Y7T8              	12.58%		
Bootstrap support for H2XPK9 as seed ortholog is 88%.
Bootstrap support for H3GHB6 as seed ortholog is 21%.
Alternative seed ortholog is H3H1I3 (73 bits away from this cluster)

Group of orthologs #1359. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.ramorum:44

F6VCD8              	100.00%		H3G6G4              	100.00%
F6SGH3              	17.41%		
Bootstrap support for F6VCD8 as seed ortholog is 100%.
Bootstrap support for H3G6G4 as seed ortholog is 93%.

Group of orthologs #1360. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 P.ramorum:172

F6SU13              	100.00%		H3GAD2              	100.00%
Bootstrap support for F6SU13 as seed ortholog is 100%.
Bootstrap support for H3GAD2 as seed ortholog is 100%.

Group of orthologs #1361. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 P.ramorum:172

F6T1X5              	100.00%		H3H0M0              	100.00%
Bootstrap support for F6T1X5 as seed ortholog is 100%.
Bootstrap support for H3H0M0 as seed ortholog is 100%.

Group of orthologs #1362. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 P.ramorum:111

H2XKH3              	100.00%		H3GFD8              	100.00%
Bootstrap support for H2XKH3 as seed ortholog is 57%.
Alternative seed ortholog is F6ZID3 (9 bits away from this cluster)
Bootstrap support for H3GFD8 as seed ortholog is 99%.

Group of orthologs #1363. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 P.ramorum:172

F7B6W8              	100.00%		H3GTI2              	100.00%
Bootstrap support for F7B6W8 as seed ortholog is 100%.
Bootstrap support for H3GTI2 as seed ortholog is 100%.

Group of orthologs #1364. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.ramorum:171

F6YG66              	100.00%		H3GAM3              	75.73%
H2XPD2              	100.00%		H3GB06              	100.00%
H2Y360              	12.69%		H3HB96              	27.18%
F6VNG2              	5.55%		H3H2V8              	7.88%
Bootstrap support for F6YG66 as seed ortholog is 100%.
Bootstrap support for H2XPD2 as seed ortholog is 100%.
Bootstrap support for H3GB06 as seed ortholog is 100%.

Group of orthologs #1365. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.ramorum:171

F7B7Y1              	100.00%		H3H0P4              	100.00%
F7BIX8              	12.76%		
Bootstrap support for F7B7Y1 as seed ortholog is 100%.
Bootstrap support for H3H0P4 as seed ortholog is 100%.

Group of orthologs #1366. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.ramorum:171

F6R407              	100.00%		H3GH50              	100.00%
Bootstrap support for F6R407 as seed ortholog is 100%.
Bootstrap support for H3GH50 as seed ortholog is 100%.

Group of orthologs #1367. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.ramorum:171

F6W1E1              	100.00%		H3GEQ8              	100.00%
Bootstrap support for F6W1E1 as seed ortholog is 100%.
Bootstrap support for H3GEQ8 as seed ortholog is 100%.

Group of orthologs #1368. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.ramorum:171

F6WM99              	100.00%		H3GI13              	100.00%
Bootstrap support for F6WM99 as seed ortholog is 100%.
Bootstrap support for H3GI13 as seed ortholog is 100%.

Group of orthologs #1369. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.ramorum:171

F6T7M7              	100.00%		H3GQT3              	100.00%
Bootstrap support for F6T7M7 as seed ortholog is 100%.
Bootstrap support for H3GQT3 as seed ortholog is 100%.

Group of orthologs #1370. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.ramorum:171

F7ACG4              	100.00%		H3GEB9              	100.00%
Bootstrap support for F7ACG4 as seed ortholog is 100%.
Bootstrap support for H3GEB9 as seed ortholog is 100%.

Group of orthologs #1371. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.ramorum:64

H2XVE0              	100.00%		H3G5H0              	100.00%
Bootstrap support for H2XVE0 as seed ortholog is 99%.
Bootstrap support for H3G5H0 as seed ortholog is 99%.

Group of orthologs #1372. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 P.ramorum:171

F6YI87              	100.00%		H3GZX4              	100.00%
Bootstrap support for F6YI87 as seed ortholog is 85%.
Bootstrap support for H3GZX4 as seed ortholog is 100%.

Group of orthologs #1373. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.ramorum:171

F7BB49              	100.00%		H3GWS0              	100.00%
Bootstrap support for F7BB49 as seed ortholog is 100%.
Bootstrap support for H3GWS0 as seed ortholog is 100%.

Group of orthologs #1374. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 P.ramorum:116

F6TCF8              	100.00%		H3GAY3              	100.00%
Bootstrap support for F6TCF8 as seed ortholog is 100%.
Bootstrap support for H3GAY3 as seed ortholog is 99%.

Group of orthologs #1375. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 P.ramorum:46

F6SM68              	100.00%		H3GER7              	100.00%
Bootstrap support for F6SM68 as seed ortholog is 100%.
Bootstrap support for H3GER7 as seed ortholog is 92%.

Group of orthologs #1376. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.ramorum:170

F6RRF2              	100.00%		H3GIZ2              	100.00%
Bootstrap support for F6RRF2 as seed ortholog is 98%.
Bootstrap support for H3GIZ2 as seed ortholog is 100%.

Group of orthologs #1377. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 P.ramorum:170

H2XWI8              	100.00%		H3GME5              	100.00%
Bootstrap support for H2XWI8 as seed ortholog is 100%.
Bootstrap support for H3GME5 as seed ortholog is 100%.

Group of orthologs #1378. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.ramorum:95

F6S855              	100.00%		H3GBA3              	100.00%
F6W3Q9              	100.00%		H3G9M9              	100.00%
F6XUY3              	64.29%		H3GHJ3              	67.70%
F6S880              	63.84%		H3G8Z3              	21.62%
H2XY22              	5.39%		H3GB66              	18.71%
F7BGH4              	5.36%		H3G9G3              	12.84%
                    	       		H3GJP2              	10.81%
Bootstrap support for F6S855 as seed ortholog is 93%.
Bootstrap support for F6W3Q9 as seed ortholog is 82%.
Bootstrap support for H3GBA3 as seed ortholog is 99%.
Bootstrap support for H3G9M9 as seed ortholog is 98%.

Group of orthologs #1379. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 P.ramorum:169

F6RQ16              	100.00%		H3HC72              	100.00%
F7AK04              	100.00%		H3GAT1              	9.02%
Bootstrap support for F6RQ16 as seed ortholog is 100%.
Bootstrap support for F7AK04 as seed ortholog is 100%.
Bootstrap support for H3HC72 as seed ortholog is 100%.

Group of orthologs #1380. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 P.ramorum:169

F6RQ34              	100.00%		H3GBW5              	100.00%
Bootstrap support for F6RQ34 as seed ortholog is 100%.
Bootstrap support for H3GBW5 as seed ortholog is 100%.

Group of orthologs #1381. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.ramorum:121

F6UJQ6              	100.00%		H3G8M0              	100.00%
Bootstrap support for F6UJQ6 as seed ortholog is 97%.
Bootstrap support for H3G8M0 as seed ortholog is 99%.

Group of orthologs #1382. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 P.ramorum:169

F6ZPU3              	100.00%		H3G9X2              	100.00%
Bootstrap support for F6ZPU3 as seed ortholog is 100%.
Bootstrap support for H3G9X2 as seed ortholog is 100%.

Group of orthologs #1383. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 P.ramorum:169

F7AL38              	100.00%		H3GPA5              	100.00%
Bootstrap support for F7AL38 as seed ortholog is 100%.
Bootstrap support for H3GPA5 as seed ortholog is 100%.

Group of orthologs #1384. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 P.ramorum:169

F6Q5L2              	100.00%		H3HDB9              	100.00%
Bootstrap support for F6Q5L2 as seed ortholog is 100%.
Bootstrap support for H3HDB9 as seed ortholog is 100%.

Group of orthologs #1385. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 P.ramorum:168

F6Q4X5              	100.00%		H3G8Y2              	100.00%
                    	       		H3H2X8              	48.47%
Bootstrap support for F6Q4X5 as seed ortholog is 100%.
Bootstrap support for H3G8Y2 as seed ortholog is 100%.

Group of orthologs #1386. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 P.ramorum:168

F6SNU1              	100.00%		H3G997              	100.00%
Bootstrap support for F6SNU1 as seed ortholog is 100%.
Bootstrap support for H3G997 as seed ortholog is 100%.

Group of orthologs #1387. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.ramorum:168

F6VP14              	100.00%		H3GEI1              	100.00%
Bootstrap support for F6VP14 as seed ortholog is 93%.
Bootstrap support for H3GEI1 as seed ortholog is 100%.

Group of orthologs #1388. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 P.ramorum:168

F6ZD00              	100.00%		H3GHZ3              	100.00%
Bootstrap support for F6ZD00 as seed ortholog is 100%.
Bootstrap support for H3GHZ3 as seed ortholog is 100%.

Group of orthologs #1389. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 P.ramorum:168

H2Y320              	100.00%		H3GA80              	100.00%
Bootstrap support for H2Y320 as seed ortholog is 100%.
Bootstrap support for H3GA80 as seed ortholog is 100%.

Group of orthologs #1390. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 P.ramorum:167

F6T385              	100.00%		H3GL66              	100.00%
Bootstrap support for F6T385 as seed ortholog is 100%.
Bootstrap support for H3GL66 as seed ortholog is 100%.

Group of orthologs #1391. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 P.ramorum:167

F6UNT7              	100.00%		H3GKK2              	100.00%
Bootstrap support for F6UNT7 as seed ortholog is 100%.
Bootstrap support for H3GKK2 as seed ortholog is 100%.

Group of orthologs #1392. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 P.ramorum:167

F6VA08              	100.00%		H3GWV5              	100.00%
Bootstrap support for F6VA08 as seed ortholog is 100%.
Bootstrap support for H3GWV5 as seed ortholog is 100%.

Group of orthologs #1393. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 P.ramorum:167

H2XWW0              	100.00%		H3GRU2              	100.00%
Bootstrap support for H2XWW0 as seed ortholog is 100%.
Bootstrap support for H3GRU2 as seed ortholog is 100%.

Group of orthologs #1394. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.ramorum:166

F6ZNP4              	100.00%		H3GWL9              	100.00%
F6V7Z4              	22.93%		
Bootstrap support for F6ZNP4 as seed ortholog is 100%.
Bootstrap support for H3GWL9 as seed ortholog is 100%.

Group of orthologs #1395. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.ramorum:166

F6W350              	100.00%		H3GGN8              	100.00%
Bootstrap support for F6W350 as seed ortholog is 100%.
Bootstrap support for H3GGN8 as seed ortholog is 100%.

Group of orthologs #1396. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.ramorum:166

F7A429              	100.00%		H3G8E5              	100.00%
Bootstrap support for F7A429 as seed ortholog is 100%.
Bootstrap support for H3G8E5 as seed ortholog is 100%.

Group of orthologs #1397. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.ramorum:166

F6QWU8              	100.00%		H3GV42              	100.00%
Bootstrap support for F6QWU8 as seed ortholog is 100%.
Bootstrap support for H3GV42 as seed ortholog is 100%.

Group of orthologs #1398. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.ramorum:44

F6TLE4              	100.00%		H3GSS2              	100.00%
Bootstrap support for F6TLE4 as seed ortholog is 100%.
Bootstrap support for H3GSS2 as seed ortholog is 82%.

Group of orthologs #1399. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.ramorum:166

F7B4X6              	100.00%		H3GAC4              	100.00%
Bootstrap support for F7B4X6 as seed ortholog is 100%.
Bootstrap support for H3GAC4 as seed ortholog is 100%.

Group of orthologs #1400. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.ramorum:166

H2XYM5              	100.00%		H3G5X9              	100.00%
Bootstrap support for H2XYM5 as seed ortholog is 100%.
Bootstrap support for H3G5X9 as seed ortholog is 100%.

Group of orthologs #1401. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.ramorum:166

H2XVM9              	100.00%		H3GN89              	100.00%
Bootstrap support for H2XVM9 as seed ortholog is 100%.
Bootstrap support for H3GN89 as seed ortholog is 100%.

Group of orthologs #1402. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.ramorum:166

F7ACM5              	100.00%		H3HBD3              	100.00%
Bootstrap support for F7ACM5 as seed ortholog is 100%.
Bootstrap support for H3HBD3 as seed ortholog is 100%.

Group of orthologs #1403. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.ramorum:165

B1H3L8              	100.00%		H3GYI2              	100.00%
                    	       		H3GYI3              	74.90%
                    	       		H3GA89              	68.90%
                    	       		H3GYI4              	64.23%
                    	       		H3G620              	30.79%
Bootstrap support for B1H3L8 as seed ortholog is 100%.
Bootstrap support for H3GYI2 as seed ortholog is 100%.

Group of orthologs #1404. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.ramorum:165

F6SUS9              	100.00%		H3G9I6              	100.00%
F6X7W0              	22.43%		
F6YNQ3              	18.78%		
Bootstrap support for F6SUS9 as seed ortholog is 100%.
Bootstrap support for H3G9I6 as seed ortholog is 100%.

Group of orthologs #1405. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.ramorum:48

F6TA22              	100.00%		H3H0J3              	100.00%
F6XFM9              	28.86%		
Bootstrap support for F6TA22 as seed ortholog is 93%.
Bootstrap support for H3H0J3 as seed ortholog is 87%.

Group of orthologs #1406. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.ramorum:122

F6U3F2              	100.00%		H3GAL5              	100.00%
Bootstrap support for F6U3F2 as seed ortholog is 100%.
Bootstrap support for H3GAL5 as seed ortholog is 100%.

Group of orthologs #1407. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.ramorum:57

F7B2Q1              	100.00%		H3G8V4              	100.00%
Bootstrap support for F7B2Q1 as seed ortholog is 100%.
Bootstrap support for H3G8V4 as seed ortholog is 95%.

Group of orthologs #1408. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.ramorum:165

F6PI67              	100.00%		H3HCL7              	100.00%
Bootstrap support for F6PI67 as seed ortholog is 100%.
Bootstrap support for H3HCL7 as seed ortholog is 100%.

Group of orthologs #1409. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.ramorum:165

F7BI62              	100.00%		H3GX90              	100.00%
Bootstrap support for F7BI62 as seed ortholog is 100%.
Bootstrap support for H3GX90 as seed ortholog is 100%.

Group of orthologs #1410. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.ramorum:165

H2XJH2              	100.00%		H3H6T6              	100.00%
Bootstrap support for H2XJH2 as seed ortholog is 100%.
Bootstrap support for H3H6T6 as seed ortholog is 100%.

Group of orthologs #1411. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.ramorum:165

H2Y1S1              	100.00%		H3GWS9              	100.00%
Bootstrap support for H2Y1S1 as seed ortholog is 100%.
Bootstrap support for H3GWS9 as seed ortholog is 100%.

Group of orthologs #1412. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 P.ramorum:164

F6Q5U4              	100.00%		H3GUW8              	100.00%
Bootstrap support for F6Q5U4 as seed ortholog is 100%.
Bootstrap support for H3GUW8 as seed ortholog is 100%.

Group of orthologs #1413. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.ramorum:164

H2XPM9              	100.00%		H3G8P7              	100.00%
Bootstrap support for H2XPM9 as seed ortholog is 99%.
Bootstrap support for H3G8P7 as seed ortholog is 100%.

Group of orthologs #1414. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 P.ramorum:119

H2XW02              	100.00%		H3G7Q5              	100.00%
Bootstrap support for H2XW02 as seed ortholog is 100%.
Bootstrap support for H3G7Q5 as seed ortholog is 100%.

Group of orthologs #1415. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 P.ramorum:164

F6XY36              	100.00%		H3H5A8              	100.00%
Bootstrap support for F6XY36 as seed ortholog is 100%.
Bootstrap support for H3H5A8 as seed ortholog is 100%.

Group of orthologs #1416. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.ramorum:90

F6Y7R5              	100.00%		H3GHR9              	100.00%
F6R107              	100.00%		H3GS50              	100.00%
                    	       		H3GS49              	60.19%
Bootstrap support for F6Y7R5 as seed ortholog is 100%.
Bootstrap support for F6R107 as seed ortholog is 100%.
Bootstrap support for H3GHR9 as seed ortholog is 97%.
Bootstrap support for H3GS50 as seed ortholog is 89%.

Group of orthologs #1417. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.ramorum:163

F6UK51              	100.00%		H3G8Z1              	100.00%
                    	       		H3G9E6              	28.95%
Bootstrap support for F6UK51 as seed ortholog is 100%.
Bootstrap support for H3G8Z1 as seed ortholog is 100%.

Group of orthologs #1418. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.ramorum:163

H2Y1G6              	100.00%		H3G8W0              	100.00%
                    	       		H3GB20              	95.18%
Bootstrap support for H2Y1G6 as seed ortholog is 100%.
Bootstrap support for H3G8W0 as seed ortholog is 100%.

Group of orthologs #1419. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.ramorum:55

F6XE85              	100.00%		H3G8H9              	100.00%
Bootstrap support for F6XE85 as seed ortholog is 100%.
Bootstrap support for H3G8H9 as seed ortholog is 96%.

Group of orthologs #1420. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.ramorum:163

F6TDK2              	100.00%		H3GS40              	100.00%
Bootstrap support for F6TDK2 as seed ortholog is 100%.
Bootstrap support for H3GS40 as seed ortholog is 100%.

Group of orthologs #1421. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.ramorum:163

F6ZEU6              	100.00%		H3GF21              	100.00%
Bootstrap support for F6ZEU6 as seed ortholog is 100%.
Bootstrap support for H3GF21 as seed ortholog is 100%.

Group of orthologs #1422. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.ramorum:163

F7ACJ3              	100.00%		H3GUY4              	100.00%
Bootstrap support for F7ACJ3 as seed ortholog is 100%.
Bootstrap support for H3GUY4 as seed ortholog is 100%.

Group of orthologs #1423. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.ramorum:163

F6T485              	100.00%		H3HDX5              	100.00%
Bootstrap support for F6T485 as seed ortholog is 100%.
Bootstrap support for H3HDX5 as seed ortholog is 100%.

Group of orthologs #1424. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.ramorum:163

F6UA18              	100.00%		H3HDU6              	100.00%
Bootstrap support for F6UA18 as seed ortholog is 100%.
Bootstrap support for H3HDU6 as seed ortholog is 100%.

Group of orthologs #1425. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.ramorum:2

F6QIH1              	100.00%		H3GCA0              	100.00%
                    	       		H3GX65              	59.01%
                    	       		H3HAU3              	45.94%
                    	       		H3GMX7              	24.35%
                    	       		H3GMX6              	23.80%
                    	       		H3GRK4              	17.47%
                    	       		H3GRK3              	15.54%
Bootstrap support for F6QIH1 as seed ortholog is 94%.
Bootstrap support for H3GCA0 as seed ortholog is 47%.
Alternative seed ortholog is H3HAU4 (2 bits away from this cluster)

Group of orthologs #1426. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.ramorum:162

F6UA38              	100.00%		H3GML8              	100.00%
Bootstrap support for F6UA38 as seed ortholog is 100%.
Bootstrap support for H3GML8 as seed ortholog is 100%.

Group of orthologs #1427. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.ramorum:66

Q6IMM2              	100.00%		H3G915              	100.00%
Bootstrap support for Q6IMM2 as seed ortholog is 95%.
Bootstrap support for H3G915 as seed ortholog is 99%.

Group of orthologs #1428. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.ramorum:25

F7BD35              	100.00%		H3GZC5              	100.00%
Bootstrap support for F7BD35 as seed ortholog is 89%.
Bootstrap support for H3GZC5 as seed ortholog is 72%.
Alternative seed ortholog is H3H2R3 (25 bits away from this cluster)

Group of orthologs #1429. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.ramorum:161

F6V5Y1              	100.00%		H3GHZ9              	100.00%
F6YW02              	71.36%		
F6WVH9              	13.93%		
F6QJA2              	5.95%		
Bootstrap support for F6V5Y1 as seed ortholog is 100%.
Bootstrap support for H3GHZ9 as seed ortholog is 100%.

Group of orthologs #1430. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 P.ramorum:40

F6TAP2              	100.00%		H3GG66              	100.00%
                    	       		H3H3Q4              	60.17%
                    	       		H3H4Y2              	51.84%
Bootstrap support for F6TAP2 as seed ortholog is 76%.
Bootstrap support for H3GG66 as seed ortholog is 81%.

Group of orthologs #1431. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.ramorum:35

F6REQ0              	100.00%		H3GA70              	100.00%
                    	       		H3GM06              	18.89%
Bootstrap support for F6REQ0 as seed ortholog is 85%.
Bootstrap support for H3GA70 as seed ortholog is 75%.

Group of orthologs #1432. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.ramorum:71

F6S569              	100.00%		H3G694              	100.00%
Bootstrap support for F6S569 as seed ortholog is 98%.
Bootstrap support for H3G694 as seed ortholog is 99%.

Group of orthologs #1433. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.ramorum:89

F6T7Y6              	100.00%		H3G6E1              	100.00%
Bootstrap support for F6T7Y6 as seed ortholog is 99%.
Bootstrap support for H3G6E1 as seed ortholog is 99%.

Group of orthologs #1434. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.ramorum:63

F6PIE8              	100.00%		H3GI19              	100.00%
Bootstrap support for F6PIE8 as seed ortholog is 88%.
Bootstrap support for H3GI19 as seed ortholog is 94%.

Group of orthologs #1435. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.ramorum:161

F6Z227              	100.00%		H3GC84              	100.00%
Bootstrap support for F6Z227 as seed ortholog is 100%.
Bootstrap support for H3GC84 as seed ortholog is 100%.

Group of orthologs #1436. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.ramorum:69

F6XG01              	100.00%		H3GI38              	100.00%
Bootstrap support for F6XG01 as seed ortholog is 99%.
Bootstrap support for H3GI38 as seed ortholog is 97%.

Group of orthologs #1437. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.ramorum:161

F6UCW1              	100.00%		H3GW59              	100.00%
Bootstrap support for F6UCW1 as seed ortholog is 100%.
Bootstrap support for H3GW59 as seed ortholog is 100%.

Group of orthologs #1438. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.ramorum:161

F6X0R0              	100.00%		H3GQZ6              	100.00%
Bootstrap support for F6X0R0 as seed ortholog is 100%.
Bootstrap support for H3GQZ6 as seed ortholog is 100%.

Group of orthologs #1439. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.ramorum:161

F6VHE0              	100.00%		H3GZ37              	100.00%
Bootstrap support for F6VHE0 as seed ortholog is 100%.
Bootstrap support for H3GZ37 as seed ortholog is 100%.

Group of orthologs #1440. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.ramorum:161

F6R180              	100.00%		H3HDZ9              	100.00%
Bootstrap support for F6R180 as seed ortholog is 100%.
Bootstrap support for H3HDZ9 as seed ortholog is 100%.

Group of orthologs #1441. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.ramorum:161

Q4H3U1              	100.00%		H3G8V2              	100.00%
Bootstrap support for Q4H3U1 as seed ortholog is 100%.
Bootstrap support for H3G8V2 as seed ortholog is 100%.

Group of orthologs #1442. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.ramorum:161

F7AFF3              	100.00%		H3HD68              	100.00%
Bootstrap support for F7AFF3 as seed ortholog is 100%.
Bootstrap support for H3HD68 as seed ortholog is 100%.

Group of orthologs #1443. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.ramorum:161

H2Y197              	100.00%		H3GVF3              	100.00%
Bootstrap support for H2Y197 as seed ortholog is 100%.
Bootstrap support for H3GVF3 as seed ortholog is 100%.

Group of orthologs #1444. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.ramorum:160

F6Z897              	100.00%		H3G9U1              	100.00%
                    	       		H3GA71              	100.00%
Bootstrap support for F6Z897 as seed ortholog is 100%.
Bootstrap support for H3G9U1 as seed ortholog is 100%.
Bootstrap support for H3GA71 as seed ortholog is 100%.

Group of orthologs #1445. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.ramorum:160

F6PIG9              	100.00%		H3G8M6              	100.00%
Bootstrap support for F6PIG9 as seed ortholog is 100%.
Bootstrap support for H3G8M6 as seed ortholog is 100%.

Group of orthologs #1446. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.ramorum:160

F6TA53              	100.00%		H3GM28              	100.00%
Bootstrap support for F6TA53 as seed ortholog is 100%.
Bootstrap support for H3GM28 as seed ortholog is 100%.

Group of orthologs #1447. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:160

F7B8M0              	100.00%		H3GHD8              	100.00%
Bootstrap support for F7B8M0 as seed ortholog is 98%.
Bootstrap support for H3GHD8 as seed ortholog is 100%.

Group of orthologs #1448. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.ramorum:160

F6QLM7              	100.00%		H3HDB3              	100.00%
Bootstrap support for F6QLM7 as seed ortholog is 100%.
Bootstrap support for H3HDB3 as seed ortholog is 100%.

Group of orthologs #1449. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.ramorum:160

H2XPE2              	100.00%		H3GUA0              	100.00%
Bootstrap support for H2XPE2 as seed ortholog is 100%.
Bootstrap support for H3GUA0 as seed ortholog is 100%.

Group of orthologs #1450. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.ramorum:160

H2XKF1              	100.00%		H3GZ44              	100.00%
Bootstrap support for H2XKF1 as seed ortholog is 100%.
Bootstrap support for H3GZ44 as seed ortholog is 100%.

Group of orthologs #1451. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 P.ramorum:159

F6VIA9              	100.00%		H3G956              	100.00%
Bootstrap support for F6VIA9 as seed ortholog is 100%.
Bootstrap support for H3G956 as seed ortholog is 100%.

Group of orthologs #1452. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 P.ramorum:159

F6YU96              	100.00%		H3GBH3              	100.00%
Bootstrap support for F6YU96 as seed ortholog is 100%.
Bootstrap support for H3GBH3 as seed ortholog is 100%.

Group of orthologs #1453. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 P.ramorum:159

F7BD94              	100.00%		H3GLK3              	100.00%
Bootstrap support for F7BD94 as seed ortholog is 100%.
Bootstrap support for H3GLK3 as seed ortholog is 100%.

Group of orthologs #1454. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 P.ramorum:158

F7BHG2              	100.00%		H3G7E0              	100.00%
Bootstrap support for F7BHG2 as seed ortholog is 57%.
Alternative seed ortholog is F6V2A4 (7 bits away from this cluster)
Bootstrap support for H3G7E0 as seed ortholog is 100%.

Group of orthologs #1455. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.ramorum:158

F6Z8N3              	100.00%		H3GSN7              	100.00%
Bootstrap support for F6Z8N3 as seed ortholog is 100%.
Bootstrap support for H3GSN7 as seed ortholog is 100%.

Group of orthologs #1456. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.ramorum:158

H2Y233              	100.00%		H3G6M7              	100.00%
Bootstrap support for H2Y233 as seed ortholog is 100%.
Bootstrap support for H3G6M7 as seed ortholog is 100%.

Group of orthologs #1457. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.ramorum:158

F7B4Q5              	100.00%		H3GS08              	100.00%
Bootstrap support for F7B4Q5 as seed ortholog is 100%.
Bootstrap support for H3GS08 as seed ortholog is 100%.

Group of orthologs #1458. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.ramorum:158

H2XK69              	100.00%		H3GWX1              	100.00%
Bootstrap support for H2XK69 as seed ortholog is 100%.
Bootstrap support for H3GWX1 as seed ortholog is 100%.

Group of orthologs #1459. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 P.ramorum:157

F6Q7D4              	100.00%		H3GLG9              	100.00%
Bootstrap support for F6Q7D4 as seed ortholog is 100%.
Bootstrap support for H3GLG9 as seed ortholog is 100%.

Group of orthologs #1460. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 P.ramorum:157

H2XK93              	100.00%		H3H1L6              	100.00%
Bootstrap support for H2XK93 as seed ortholog is 100%.
Bootstrap support for H3H1L6 as seed ortholog is 100%.

Group of orthologs #1461. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.ramorum:156

Q5VHU5              	100.00%		H3GCZ6              	100.00%
Q5VHU3              	32.43%		H3GCZ5              	78.94%
                    	       		H3GCZ7              	75.00%
                    	       		H3GCY7              	70.61%
                    	       		H3G6M1              	67.68%
Bootstrap support for Q5VHU5 as seed ortholog is 100%.
Bootstrap support for H3GCZ6 as seed ortholog is 100%.

Group of orthologs #1462. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.ramorum:41

F6U3T3              	100.00%		H3H2F1              	100.00%
                    	       		H3HE84              	29.93%
                    	       		H3HCX1              	26.51%
                    	       		H3GC05              	6.89%
Bootstrap support for F6U3T3 as seed ortholog is 91%.
Bootstrap support for H3H2F1 as seed ortholog is 60%.
Alternative seed ortholog is H3GLB9 (41 bits away from this cluster)

Group of orthologs #1463. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:80

F6QEE3              	100.00%		H3GMA7              	100.00%
                    	       		H3GGY9              	49.70%
                    	       		H3GM42              	10.85%
Bootstrap support for F6QEE3 as seed ortholog is 99%.
Bootstrap support for H3GMA7 as seed ortholog is 99%.

Group of orthologs #1464. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.ramorum:37

F6XJX5              	100.00%		H3H4A2              	100.00%
                    	       		H3H3P5              	39.05%
Bootstrap support for F6XJX5 as seed ortholog is 99%.
Bootstrap support for H3H4A2 as seed ortholog is 86%.

Group of orthologs #1465. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:110

F6U182              	100.00%		H3G9P0              	100.00%
Bootstrap support for F6U182 as seed ortholog is 99%.
Bootstrap support for H3G9P0 as seed ortholog is 99%.

Group of orthologs #1466. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.ramorum:87

F6XJ18              	100.00%		H3GFQ4              	100.00%
Bootstrap support for F6XJ18 as seed ortholog is 100%.
Bootstrap support for H3GFQ4 as seed ortholog is 99%.

Group of orthologs #1467. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.ramorum:156

F6X3L7              	100.00%		H3GKI1              	100.00%
Bootstrap support for F6X3L7 as seed ortholog is 100%.
Bootstrap support for H3GKI1 as seed ortholog is 100%.

Group of orthologs #1468. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.ramorum:156

F7AE51              	100.00%		H3GD40              	100.00%
Bootstrap support for F7AE51 as seed ortholog is 100%.
Bootstrap support for H3GD40 as seed ortholog is 100%.

Group of orthologs #1469. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.ramorum:156

F6VG38              	100.00%		H3GSK1              	100.00%
Bootstrap support for F6VG38 as seed ortholog is 100%.
Bootstrap support for H3GSK1 as seed ortholog is 100%.

Group of orthologs #1470. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.ramorum:156

H2XWQ0              	100.00%		H3G7G4              	100.00%
Bootstrap support for H2XWQ0 as seed ortholog is 100%.
Bootstrap support for H3G7G4 as seed ortholog is 100%.

Group of orthologs #1471. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.ramorum:45

F6XDJ2              	100.00%		H3GXC9              	100.00%
Bootstrap support for F6XDJ2 as seed ortholog is 88%.
Bootstrap support for H3GXC9 as seed ortholog is 93%.

Group of orthologs #1472. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.ramorum:156

F6Y3X0              	100.00%		H3GYT5              	100.00%
Bootstrap support for F6Y3X0 as seed ortholog is 100%.
Bootstrap support for H3GYT5 as seed ortholog is 100%.

Group of orthologs #1473. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.ramorum:156

F7BK77              	100.00%		H3HAV1              	100.00%
Bootstrap support for F7BK77 as seed ortholog is 100%.
Bootstrap support for H3HAV1 as seed ortholog is 100%.

Group of orthologs #1474. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.ramorum:156

H2XS37              	100.00%		H3HB87              	100.00%
Bootstrap support for H2XS37 as seed ortholog is 100%.
Bootstrap support for H3HB87 as seed ortholog is 100%.

Group of orthologs #1475. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.ramorum:155

F6QAM3              	100.00%		H3GHL6              	100.00%
F6QAL4              	100.00%		H3GHL5              	100.00%
F6X1X1              	43.56%		H3GR24              	74.56%
F6X593              	16.61%		H3GHL4              	48.01%
F6SL89              	13.99%		H3H3A1              	19.87%
H2XX96              	11.19%		
Bootstrap support for F6QAM3 as seed ortholog is 99%.
Bootstrap support for F6QAL4 as seed ortholog is 99%.
Bootstrap support for H3GHL6 as seed ortholog is 100%.
Bootstrap support for H3GHL5 as seed ortholog is 100%.

Group of orthologs #1476. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.ramorum:155

H2XKF9              	100.00%		H3G635              	100.00%
                    	       		H3G636              	79.44%
                    	       		H3GKW0              	77.46%
                    	       		H3G638              	60.28%
Bootstrap support for H2XKF9 as seed ortholog is 100%.
Bootstrap support for H3G635 as seed ortholog is 100%.

Group of orthologs #1477. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.ramorum:6

F6QI54              	100.00%		H3GXL6              	100.00%
                    	       		H3HBR9              	42.13%
Bootstrap support for F6QI54 as seed ortholog is 100%.
Bootstrap support for H3GXL6 as seed ortholog is 57%.
Alternative seed ortholog is H3GLC0 (6 bits away from this cluster)

Group of orthologs #1478. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.ramorum:155

F6QAE6              	100.00%		H3G918              	100.00%
Bootstrap support for F6QAE6 as seed ortholog is 100%.
Bootstrap support for H3G918 as seed ortholog is 100%.

Group of orthologs #1479. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.ramorum:155

F6T6F5              	100.00%		H3GZL1              	100.00%
Bootstrap support for F6T6F5 as seed ortholog is 100%.
Bootstrap support for H3GZL1 as seed ortholog is 100%.

Group of orthologs #1480. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.ramorum:155

F6V437              	100.00%		H3H1C0              	100.00%
Bootstrap support for F6V437 as seed ortholog is 100%.
Bootstrap support for H3H1C0 as seed ortholog is 100%.

Group of orthologs #1481. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.ramorum:155

H2XS95              	100.00%		H3GEE5              	100.00%
Bootstrap support for H2XS95 as seed ortholog is 100%.
Bootstrap support for H3GEE5 as seed ortholog is 100%.

Group of orthologs #1482. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.ramorum:155

F6ZDT1              	100.00%		H3H7F2              	100.00%
Bootstrap support for F6ZDT1 as seed ortholog is 100%.
Bootstrap support for H3H7F2 as seed ortholog is 100%.

Group of orthologs #1483. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.ramorum:40

H2XQR1              	100.00%		H3H4I2              	100.00%
Bootstrap support for H2XQR1 as seed ortholog is 100%.
Bootstrap support for H3H4I2 as seed ortholog is 80%.

Group of orthologs #1484. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.ramorum:155

H2Y076              	100.00%		H3H1D5              	100.00%
Bootstrap support for H2Y076 as seed ortholog is 100%.
Bootstrap support for H3H1D5 as seed ortholog is 100%.

Group of orthologs #1485. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 P.ramorum:25

F6ZVC5              	100.00%		H3H0L7              	100.00%
F6QR95              	50.60%		H3GLS9              	13.21%
F6QR87              	35.04%		H3GLT0              	9.19%
                    	       		H3H2F8              	8.44%
                    	       		H3GIS4              	8.27%
                    	       		H3H2F9              	7.93%
                    	       		H3GQ40              	7.35%
                    	       		H3H2F4              	6.20%
                    	       		H3GUT7              	6.15%
Bootstrap support for F6ZVC5 as seed ortholog is 100%.
Bootstrap support for H3H0L7 as seed ortholog is 53%.
Alternative seed ortholog is H3GIU1 (25 bits away from this cluster)

Group of orthologs #1486. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 P.ramorum:154

F6QXQ1              	100.00%		H3G6L3              	100.00%
F6PPW9              	51.72%		H3G8A0              	100.00%
Bootstrap support for F6QXQ1 as seed ortholog is 100%.
Bootstrap support for H3G6L3 as seed ortholog is 100%.
Bootstrap support for H3G8A0 as seed ortholog is 100%.

Group of orthologs #1487. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 P.ramorum:154

F6UMT8              	100.00%		H3G7H2              	100.00%
                    	       		H3GAC3              	18.98%
Bootstrap support for F6UMT8 as seed ortholog is 100%.
Bootstrap support for H3G7H2 as seed ortholog is 100%.

Group of orthologs #1488. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 P.ramorum:154

F6ZT40              	100.00%		H3GFT0              	100.00%
                    	       		H3GEE2              	75.81%
Bootstrap support for F6ZT40 as seed ortholog is 100%.
Bootstrap support for H3GFT0 as seed ortholog is 100%.

Group of orthologs #1489. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 P.ramorum:55

F6V8V5              	100.00%		H3GYP8              	100.00%
H2Y0H5              	50.70%		
Bootstrap support for F6V8V5 as seed ortholog is 100%.
Bootstrap support for H3GYP8 as seed ortholog is 87%.

Group of orthologs #1490. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 P.ramorum:154

F6RED0              	100.00%		H3GA08              	100.00%
Bootstrap support for F6RED0 as seed ortholog is 100%.
Bootstrap support for H3GA08 as seed ortholog is 100%.

Group of orthologs #1491. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 P.ramorum:154

Q3MQ22              	100.00%		H3GF06              	100.00%
Bootstrap support for Q3MQ22 as seed ortholog is 100%.
Bootstrap support for H3GF06 as seed ortholog is 100%.

Group of orthologs #1492. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.ramorum:153

F6PJU1              	100.00%		H3GEJ9              	100.00%
Bootstrap support for F6PJU1 as seed ortholog is 100%.
Bootstrap support for H3GEJ9 as seed ortholog is 100%.

Group of orthologs #1493. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.ramorum:153

F6RZU6              	100.00%		H3GH72              	100.00%
Bootstrap support for F6RZU6 as seed ortholog is 100%.
Bootstrap support for H3GH72 as seed ortholog is 100%.

Group of orthologs #1494. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.ramorum:153

F7BNU5              	100.00%		H3G545              	100.00%
Bootstrap support for F7BNU5 as seed ortholog is 100%.
Bootstrap support for H3G545 as seed ortholog is 100%.

Group of orthologs #1495. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.ramorum:153

F6SDM6              	100.00%		H3GSJ5              	100.00%
Bootstrap support for F6SDM6 as seed ortholog is 100%.
Bootstrap support for H3GSJ5 as seed ortholog is 100%.

Group of orthologs #1496. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.ramorum:153

F6W9C9              	100.00%		H3GUI4              	100.00%
Bootstrap support for F6W9C9 as seed ortholog is 100%.
Bootstrap support for H3GUI4 as seed ortholog is 100%.

Group of orthologs #1497. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.ramorum:153

F6ZCF4              	100.00%		H3GSB4              	100.00%
Bootstrap support for F6ZCF4 as seed ortholog is 100%.
Bootstrap support for H3GSB4 as seed ortholog is 100%.

Group of orthologs #1498. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.ramorum:153

Q4H329              	100.00%		H3G7X5              	100.00%
Bootstrap support for Q4H329 as seed ortholog is 100%.
Bootstrap support for H3G7X5 as seed ortholog is 100%.

Group of orthologs #1499. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.ramorum:153

F6UW27              	100.00%		H3HEE5              	100.00%
Bootstrap support for F6UW27 as seed ortholog is 100%.
Bootstrap support for H3HEE5 as seed ortholog is 100%.

Group of orthologs #1500. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 P.ramorum:152

F6RS86              	100.00%		H3GKG5              	100.00%
F7ARF4              	63.68%		H3GKL9              	31.53%
F6RBM9              	13.91%		H3GKM0              	31.08%
F6Z1A5              	13.68%		H3GKM2              	24.78%
F6T5A7              	13.33%		H3GQH3              	21.90%
F6RID1              	12.64%		H3GQH4              	21.46%
H2Y3F7              	9.66%		H3GWE6              	21.35%
F7BI82              	9.20%		H3GES5              	20.35%
F6T010              	9.08%		H3GES4              	20.24%
                    	       		H3HBY4              	19.47%
                    	       		H3GQJ1              	19.03%
                    	       		H3GRJ9              	18.69%
                    	       		H3GMY9              	18.47%
                    	       		H3GAC8              	17.92%
                    	       		H3GGY6              	17.37%
                    	       		H3GRJ4              	16.15%
                    	       		H3GRK0              	15.71%
                    	       		H3GGY5              	14.71%
                    	       		H3GKY4              	14.60%
                    	       		H3GBW0              	13.83%
                    	       		H3H0D6              	6.64%
Bootstrap support for F6RS86 as seed ortholog is 67%.
Alternative seed ortholog is H2Y2K3 (24 bits away from this cluster)
Bootstrap support for H3GKG5 as seed ortholog is 100%.

Group of orthologs #1501. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 P.ramorum:152

F6W7Q3              	100.00%		H3GA04              	100.00%
Bootstrap support for F6W7Q3 as seed ortholog is 100%.
Bootstrap support for H3GA04 as seed ortholog is 100%.

Group of orthologs #1502. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 P.ramorum:152

F6YB21              	100.00%		H3GAG5              	100.00%
Bootstrap support for F6YB21 as seed ortholog is 100%.
Bootstrap support for H3GAG5 as seed ortholog is 100%.

Group of orthologs #1503. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 P.ramorum:152

F6Z998              	100.00%		H3G808              	100.00%
Bootstrap support for F6Z998 as seed ortholog is 100%.
Bootstrap support for H3G808 as seed ortholog is 100%.

Group of orthologs #1504. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 P.ramorum:152

F7B383              	100.00%		H3GS81              	100.00%
Bootstrap support for F7B383 as seed ortholog is 100%.
Bootstrap support for H3GS81 as seed ortholog is 100%.

Group of orthologs #1505. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 P.ramorum:29

H2XNS7              	100.00%		H3GRW8              	100.00%
Bootstrap support for H2XNS7 as seed ortholog is 73%.
Alternative seed ortholog is F6PTJ9 (14 bits away from this cluster)
Bootstrap support for H3GRW8 as seed ortholog is 77%.

Group of orthologs #1506. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 P.ramorum:152

F7AP89              	100.00%		H3HCQ7              	100.00%
Bootstrap support for F7AP89 as seed ortholog is 100%.
Bootstrap support for H3HCQ7 as seed ortholog is 100%.

Group of orthologs #1507. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 P.ramorum:152

H2XU65              	100.00%		H3HBE3              	100.00%
Bootstrap support for H2XU65 as seed ortholog is 100%.
Bootstrap support for H3HBE3 as seed ortholog is 100%.

Group of orthologs #1508. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.ramorum:151

F6W1X7              	100.00%		H3G6N6              	100.00%
F6Z9B3              	100.00%		
Bootstrap support for F6W1X7 as seed ortholog is 100%.
Bootstrap support for F6Z9B3 as seed ortholog is 100%.
Bootstrap support for H3G6N6 as seed ortholog is 100%.

Group of orthologs #1509. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.ramorum:65

F6W804              	100.00%		H3GRN8              	100.00%
F6Q9F4              	23.94%		
Bootstrap support for F6W804 as seed ortholog is 93%.
Bootstrap support for H3GRN8 as seed ortholog is 98%.

Group of orthologs #1510. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.ramorum:151

F6S1K1              	100.00%		H3GBQ0              	100.00%
Bootstrap support for F6S1K1 as seed ortholog is 100%.
Bootstrap support for H3GBQ0 as seed ortholog is 100%.

Group of orthologs #1511. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.ramorum:151

F6VBS7              	100.00%		H3G5A2              	100.00%
Bootstrap support for F6VBS7 as seed ortholog is 99%.
Bootstrap support for H3G5A2 as seed ortholog is 100%.

Group of orthologs #1512. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.ramorum:151

F6TKL9              	100.00%		H3GIG5              	100.00%
Bootstrap support for F6TKL9 as seed ortholog is 100%.
Bootstrap support for H3GIG5 as seed ortholog is 100%.

Group of orthologs #1513. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.ramorum:151

F6PPJ7              	100.00%		H3GX22              	100.00%
Bootstrap support for F6PPJ7 as seed ortholog is 100%.
Bootstrap support for H3GX22 as seed ortholog is 100%.

Group of orthologs #1514. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.ramorum:151

F6Z0V4              	100.00%		H3GNV0              	100.00%
Bootstrap support for F6Z0V4 as seed ortholog is 100%.
Bootstrap support for H3GNV0 as seed ortholog is 100%.

Group of orthologs #1515. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.ramorum:151

F6Z541              	100.00%		H3GY55              	100.00%
Bootstrap support for F6Z541 as seed ortholog is 100%.
Bootstrap support for H3GY55 as seed ortholog is 100%.

Group of orthologs #1516. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.ramorum:151

H2Y0Q6              	100.00%		H3GS44              	100.00%
Bootstrap support for H2Y0Q6 as seed ortholog is 100%.
Bootstrap support for H3GS44 as seed ortholog is 100%.

Group of orthologs #1517. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 P.ramorum:150

F6S6I4              	100.00%		H3GJY2              	100.00%
H2XMQ5              	18.16%		
F6SPL5              	12.25%		
Bootstrap support for F6S6I4 as seed ortholog is 100%.
Bootstrap support for H3GJY2 as seed ortholog is 100%.

Group of orthologs #1518. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 P.ramorum:150

F6ZTX2              	100.00%		H3H8M5              	100.00%
                    	       		H3GCJ1              	90.96%
Bootstrap support for F6ZTX2 as seed ortholog is 100%.
Bootstrap support for H3H8M5 as seed ortholog is 100%.

Group of orthologs #1519. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.ramorum:16

F6TYS5              	100.00%		H3G7X8              	100.00%
Bootstrap support for F6TYS5 as seed ortholog is 98%.
Bootstrap support for H3G7X8 as seed ortholog is 26%.
Alternative seed ortholog is H3G525 (16 bits away from this cluster)

Group of orthologs #1520. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 P.ramorum:150

F6XFZ5              	100.00%		H3GGQ6              	100.00%
Bootstrap support for F6XFZ5 as seed ortholog is 100%.
Bootstrap support for H3GGQ6 as seed ortholog is 100%.

Group of orthologs #1521. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 P.ramorum:8

F6RS66              	100.00%		H3H5E8              	100.00%
Bootstrap support for F6RS66 as seed ortholog is 73%.
Alternative seed ortholog is H2XXR6 (2 bits away from this cluster)
Bootstrap support for H3H5E8 as seed ortholog is 76%.

Group of orthologs #1522. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 P.ramorum:150

F6WSV9              	100.00%		H3GZV8              	100.00%
Bootstrap support for F6WSV9 as seed ortholog is 100%.
Bootstrap support for H3GZV8 as seed ortholog is 100%.

Group of orthologs #1523. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.ramorum:150

H2XWC1              	100.00%		H3HAR5              	100.00%
Bootstrap support for H2XWC1 as seed ortholog is 93%.
Bootstrap support for H3HAR5 as seed ortholog is 100%.

Group of orthologs #1524. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.ramorum:149

F6XLX0              	100.00%		H3GQR4              	100.00%
                    	       		H3GQE4              	14.12%
                    	       		H3GJU6              	13.53%
                    	       		H3GN81              	12.64%
                    	       		H3H377              	9.92%
                    	       		H3GUL7              	9.75%
                    	       		H3GVR6              	7.27%
Bootstrap support for F6XLX0 as seed ortholog is 100%.
Bootstrap support for H3GQR4 as seed ortholog is 100%.

Group of orthologs #1525. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.ramorum:9

F7A801              	100.00%		H3H811              	100.00%
F6X4I5              	5.92%		H3H5A3              	92.62%
Bootstrap support for F7A801 as seed ortholog is 94%.
Bootstrap support for H3H811 as seed ortholog is 64%.
Alternative seed ortholog is H3GXH6 (9 bits away from this cluster)

Group of orthologs #1526. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 P.ramorum:9

F6RJ81              	100.00%		H3H171              	100.00%
                    	       		H3H6P7              	100.00%
Bootstrap support for F6RJ81 as seed ortholog is 63%.
Alternative seed ortholog is H2XYX4 (10 bits away from this cluster)
Bootstrap support for H3H171 as seed ortholog is 66%.
Alternative seed ortholog is H3GUG3 (9 bits away from this cluster)
Bootstrap support for H3H6P7 as seed ortholog is 64%.
Alternative seed ortholog is H3GUG3 (9 bits away from this cluster)

Group of orthologs #1527. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 P.ramorum:149

H2Y2E8              	100.00%		H3GTS8              	100.00%
                    	       		H3GFE6              	20.09%
Bootstrap support for H2Y2E8 as seed ortholog is 53%.
Alternative seed ortholog is F7A160 (7 bits away from this cluster)
Bootstrap support for H3GTS8 as seed ortholog is 100%.

Group of orthologs #1528. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.ramorum:149

F6UTG5              	100.00%		H3G8X4              	100.00%
Bootstrap support for F6UTG5 as seed ortholog is 99%.
Bootstrap support for H3G8X4 as seed ortholog is 100%.

Group of orthologs #1529. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.ramorum:149

F6Q2F8              	100.00%		H3GJ70              	100.00%
Bootstrap support for F6Q2F8 as seed ortholog is 100%.
Bootstrap support for H3GJ70 as seed ortholog is 100%.

Group of orthologs #1530. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.ramorum:149

F6VFA0              	100.00%		H3G946              	100.00%
Bootstrap support for F6VFA0 as seed ortholog is 100%.
Bootstrap support for H3G946 as seed ortholog is 100%.

Group of orthologs #1531. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.ramorum:149

F6YL86              	100.00%		H3G9J1              	100.00%
Bootstrap support for F6YL86 as seed ortholog is 100%.
Bootstrap support for H3G9J1 as seed ortholog is 100%.

Group of orthologs #1532. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.ramorum:149

F7AMW5              	100.00%		H3GA40              	100.00%
Bootstrap support for F7AMW5 as seed ortholog is 100%.
Bootstrap support for H3GA40 as seed ortholog is 100%.

Group of orthologs #1533. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.ramorum:149

F6R4Z1              	100.00%		H3H442              	100.00%
Bootstrap support for F6R4Z1 as seed ortholog is 100%.
Bootstrap support for H3H442 as seed ortholog is 100%.

Group of orthologs #1534. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.ramorum:149

H2XL84              	100.00%		H3GH43              	100.00%
Bootstrap support for H2XL84 as seed ortholog is 100%.
Bootstrap support for H3GH43 as seed ortholog is 100%.

Group of orthologs #1535. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.ramorum:149

H2XJL7              	100.00%		H3GSI1              	100.00%
Bootstrap support for H2XJL7 as seed ortholog is 100%.
Bootstrap support for H3GSI1 as seed ortholog is 100%.

Group of orthologs #1536. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.ramorum:149

H2Y256              	100.00%		H3GW57              	100.00%
Bootstrap support for H2Y256 as seed ortholog is 100%.
Bootstrap support for H3GW57 as seed ortholog is 100%.

Group of orthologs #1537. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.ramorum:149

H2XR58              	100.00%		H3HEE6              	100.00%
Bootstrap support for H2XR58 as seed ortholog is 100%.
Bootstrap support for H3HEE6 as seed ortholog is 100%.

Group of orthologs #1538. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.ramorum:148

F6V8N0              	100.00%		H3GGD2              	100.00%
H2Y092              	8.27%		
Bootstrap support for F6V8N0 as seed ortholog is 100%.
Bootstrap support for H3GGD2 as seed ortholog is 100%.

Group of orthologs #1539. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.ramorum:48

H2XPL6              	100.00%		H3G8N2              	100.00%
                    	       		H3GI43              	24.11%
Bootstrap support for H2XPL6 as seed ortholog is 92%.
Bootstrap support for H3G8N2 as seed ortholog is 91%.

Group of orthologs #1540. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.ramorum:148

H2Y2E7              	100.00%		H3H080              	100.00%
                    	       		H3H829              	100.00%
Bootstrap support for H2Y2E7 as seed ortholog is 98%.
Bootstrap support for H3H080 as seed ortholog is 100%.
Bootstrap support for H3H829 as seed ortholog is 100%.

Group of orthologs #1541. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.ramorum:148

F6WUF6              	100.00%		H3G8U6              	100.00%
Bootstrap support for F6WUF6 as seed ortholog is 100%.
Bootstrap support for H3G8U6 as seed ortholog is 100%.

Group of orthologs #1542. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.ramorum:148

F6VR50              	100.00%		H3GI80              	100.00%
Bootstrap support for F6VR50 as seed ortholog is 100%.
Bootstrap support for H3GI80 as seed ortholog is 100%.

Group of orthologs #1543. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.ramorum:148

F6R012              	100.00%		H3GW53              	100.00%
Bootstrap support for F6R012 as seed ortholog is 100%.
Bootstrap support for H3GW53 as seed ortholog is 100%.

Group of orthologs #1544. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.ramorum:148

F6ZTJ9              	100.00%		H3GEY7              	100.00%
Bootstrap support for F6ZTJ9 as seed ortholog is 100%.
Bootstrap support for H3GEY7 as seed ortholog is 100%.

Group of orthologs #1545. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.ramorum:148

F6W5C2              	100.00%		H3GWL3              	100.00%
Bootstrap support for F6W5C2 as seed ortholog is 100%.
Bootstrap support for H3GWL3 as seed ortholog is 100%.

Group of orthologs #1546. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.ramorum:148

F6UMP0              	100.00%		H3HE08              	100.00%
Bootstrap support for F6UMP0 as seed ortholog is 100%.
Bootstrap support for H3HE08 as seed ortholog is 100%.

Group of orthologs #1547. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.ramorum:148

F6ZCL3              	100.00%		H3HCK3              	100.00%
Bootstrap support for F6ZCL3 as seed ortholog is 100%.
Bootstrap support for H3HCK3 as seed ortholog is 100%.

Group of orthologs #1548. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 P.ramorum:147

F6Y1Z7              	100.00%		H3GCL4              	100.00%
Bootstrap support for F6Y1Z7 as seed ortholog is 100%.
Bootstrap support for H3GCL4 as seed ortholog is 100%.

Group of orthologs #1549. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 P.ramorum:147

H2Y184              	100.00%		H3GH02              	100.00%
Bootstrap support for H2Y184 as seed ortholog is 100%.
Bootstrap support for H3GH02 as seed ortholog is 100%.

Group of orthologs #1550. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 P.ramorum:30

F6WH54              	100.00%		H3GHI1              	100.00%
F6RMF5              	54.94%		H3GVG5              	30.52%
H2XP37              	48.27%		H3H6B0              	29.11%
F6TXB9              	30.37%		H3GJ01              	5.75%
F6XP43              	29.88%		
F6Z4V3              	19.38%		
F6PN33              	12.47%		
F6WYA1              	12.35%		
F6QTW3              	9.51%		
Bootstrap support for F6WH54 as seed ortholog is 69%.
Alternative seed ortholog is F6RZA6 (16 bits away from this cluster)
Bootstrap support for H3GHI1 as seed ortholog is 80%.

Group of orthologs #1551. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.ramorum:22

F6S146              	100.00%		H3H346              	100.00%
F6RQ08              	7.99%		
Bootstrap support for F6S146 as seed ortholog is 100%.
Bootstrap support for H3H346 as seed ortholog is 68%.
Alternative seed ortholog is H3GE87 (22 bits away from this cluster)

Group of orthologs #1552. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 P.ramorum:28

F6YWA2              	100.00%		H3HDP8              	100.00%
F6WZV6              	36.49%		
Bootstrap support for F6YWA2 as seed ortholog is 59%.
Alternative seed ortholog is H2XLI9 (7 bits away from this cluster)
Bootstrap support for H3HDP8 as seed ortholog is 93%.

Group of orthologs #1553. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.ramorum:58

H2XJR2              	100.00%		H3HDG7              	100.00%
F6WB20              	15.10%		
Bootstrap support for H2XJR2 as seed ortholog is 99%.
Bootstrap support for H3HDG7 as seed ortholog is 98%.

Group of orthologs #1554. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.ramorum:146

F6QQ49              	100.00%		H3GVA1              	100.00%
Bootstrap support for F6QQ49 as seed ortholog is 100%.
Bootstrap support for H3GVA1 as seed ortholog is 100%.

Group of orthologs #1555. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.ramorum:146

F6W1S6              	100.00%		H3GJI2              	100.00%
Bootstrap support for F6W1S6 as seed ortholog is 100%.
Bootstrap support for H3GJI2 as seed ortholog is 100%.

Group of orthologs #1556. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.ramorum:146

F6S7T3              	100.00%		H3GUR6              	100.00%
Bootstrap support for F6S7T3 as seed ortholog is 100%.
Bootstrap support for H3GUR6 as seed ortholog is 100%.

Group of orthologs #1557. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.ramorum:146

F6YSG2              	100.00%		H3GHR0              	100.00%
Bootstrap support for F6YSG2 as seed ortholog is 100%.
Bootstrap support for H3GHR0 as seed ortholog is 100%.

Group of orthologs #1558. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.ramorum:55

H2XQC1              	100.00%		H3GU33              	100.00%
Bootstrap support for H2XQC1 as seed ortholog is 93%.
Bootstrap support for H3GU33 as seed ortholog is 91%.

Group of orthologs #1559. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.ramorum:146

Q4H2I7              	100.00%		H3GMC3              	100.00%
Bootstrap support for Q4H2I7 as seed ortholog is 100%.
Bootstrap support for H3GMC3 as seed ortholog is 100%.

Group of orthologs #1560. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 P.ramorum:60

F6XJ57              	100.00%		H3GD78              	100.00%
F7AMQ9              	100.00%		H3GSM0              	100.00%
                    	       		H3GPR3              	12.65%
                    	       		H3GIF5              	6.99%
Bootstrap support for F6XJ57 as seed ortholog is 100%.
Bootstrap support for F7AMQ9 as seed ortholog is 100%.
Bootstrap support for H3GD78 as seed ortholog is 95%.
Bootstrap support for H3GSM0 as seed ortholog is 41%.
Alternative seed ortholog is H3GCD9 (60 bits away from this cluster)

Group of orthologs #1561. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 P.ramorum:145

F6Q484              	100.00%		H3G8P8              	100.00%
Bootstrap support for F6Q484 as seed ortholog is 100%.
Bootstrap support for H3G8P8 as seed ortholog is 100%.

Group of orthologs #1562. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 P.ramorum:145

F6YGF8              	100.00%		H3GX87              	100.00%
Bootstrap support for F6YGF8 as seed ortholog is 100%.
Bootstrap support for H3GX87 as seed ortholog is 100%.

Group of orthologs #1563. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 P.ramorum:36

F6WW36              	100.00%		H3GA34              	100.00%
H2XRG7              	20.17%		
Bootstrap support for F6WW36 as seed ortholog is 77%.
Bootstrap support for H3GA34 as seed ortholog is 86%.

Group of orthologs #1564. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.ramorum:55

H2XK11              	100.00%		H3HCT5              	100.00%
                    	       		H3HC41              	6.04%
Bootstrap support for H2XK11 as seed ortholog is 89%.
Bootstrap support for H3HCT5 as seed ortholog is 94%.

Group of orthologs #1565. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.ramorum:144

F6QTI2              	100.00%		H3GA64              	100.00%
Bootstrap support for F6QTI2 as seed ortholog is 100%.
Bootstrap support for H3GA64 as seed ortholog is 100%.

Group of orthologs #1566. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.ramorum:144

F6TQZ3              	100.00%		H3G671              	100.00%
Bootstrap support for F6TQZ3 as seed ortholog is 100%.
Bootstrap support for H3G671 as seed ortholog is 100%.

Group of orthologs #1567. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.ramorum:144

F6V9X6              	100.00%		H3GLU3              	100.00%
Bootstrap support for F6V9X6 as seed ortholog is 100%.
Bootstrap support for H3GLU3 as seed ortholog is 100%.

Group of orthologs #1568. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.ramorum:144

H2XPV5              	100.00%		H3G8X9              	100.00%
Bootstrap support for H2XPV5 as seed ortholog is 92%.
Bootstrap support for H3G8X9 as seed ortholog is 100%.

Group of orthologs #1569. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.ramorum:144

F6T4T6              	100.00%		H3H079              	100.00%
Bootstrap support for F6T4T6 as seed ortholog is 100%.
Bootstrap support for H3H079 as seed ortholog is 100%.

Group of orthologs #1570. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.ramorum:144

F6UGT8              	100.00%		H3HBU3              	100.00%
Bootstrap support for F6UGT8 as seed ortholog is 96%.
Bootstrap support for H3HBU3 as seed ortholog is 100%.

Group of orthologs #1571. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:69

F6T569              	100.00%		H3GU99              	100.00%
F6YD46              	100.00%		H3GU97              	100.00%
F6WGU2              	57.38%		H3GU98              	42.86%
                    	       		H3GUH1              	14.04%
Bootstrap support for F6T569 as seed ortholog is 99%.
Bootstrap support for F6YD46 as seed ortholog is 98%.
Bootstrap support for H3GU99 as seed ortholog is 99%.
Bootstrap support for H3GU97 as seed ortholog is 99%.

Group of orthologs #1572. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 P.ramorum:143

Q8T880              	100.00%		H3GGE1              	100.00%
F7AEU0              	98.88%		
Bootstrap support for Q8T880 as seed ortholog is 100%.
Bootstrap support for H3GGE1 as seed ortholog is 100%.

Group of orthologs #1573. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.ramorum:143

F6X2L1              	100.00%		H3HE55              	100.00%
                    	       		H3H1T3              	59.69%
Bootstrap support for F6X2L1 as seed ortholog is 98%.
Bootstrap support for H3HE55 as seed ortholog is 100%.

Group of orthologs #1574. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.ramorum:81

F6S9I2              	100.00%		H3GD84              	100.00%
Bootstrap support for F6S9I2 as seed ortholog is 99%.
Bootstrap support for H3GD84 as seed ortholog is 99%.

Group of orthologs #1575. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 P.ramorum:95

F6WTV6              	100.00%		H3GA95              	100.00%
Bootstrap support for F6WTV6 as seed ortholog is 100%.
Bootstrap support for H3GA95 as seed ortholog is 96%.

Group of orthologs #1576. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.ramorum:4

F6TCR0              	100.00%		H3GIL4              	100.00%
Bootstrap support for F6TCR0 as seed ortholog is 90%.
Bootstrap support for H3GIL4 as seed ortholog is 47%.
Alternative seed ortholog is H3GJB3 (4 bits away from this cluster)

Group of orthologs #1577. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 P.ramorum:143

F6SWB6              	100.00%		H3GK14              	100.00%
Bootstrap support for F6SWB6 as seed ortholog is 100%.
Bootstrap support for H3GK14 as seed ortholog is 100%.

Group of orthologs #1578. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 P.ramorum:94

F7AX27              	100.00%		H3G7L6              	100.00%
Bootstrap support for F7AX27 as seed ortholog is 100%.
Bootstrap support for H3G7L6 as seed ortholog is 100%.

Group of orthologs #1579. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 P.ramorum:143

F6SDU1              	100.00%		H3GXF2              	100.00%
Bootstrap support for F6SDU1 as seed ortholog is 100%.
Bootstrap support for H3GXF2 as seed ortholog is 100%.

Group of orthologs #1580. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 P.ramorum:143

F6Z8R5              	100.00%		H3GKL5              	100.00%
Bootstrap support for F6Z8R5 as seed ortholog is 100%.
Bootstrap support for H3GKL5 as seed ortholog is 100%.

Group of orthologs #1581. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 P.ramorum:143

H2XRU0              	100.00%		H3GNS4              	100.00%
Bootstrap support for H2XRU0 as seed ortholog is 100%.
Bootstrap support for H3GNS4 as seed ortholog is 100%.

Group of orthologs #1582. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 P.ramorum:143

H2XP92              	100.00%		H3GRU5              	100.00%
Bootstrap support for H2XP92 as seed ortholog is 100%.
Bootstrap support for H3GRU5 as seed ortholog is 100%.

Group of orthologs #1583. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.ramorum:69

H2Y1N7              	100.00%		H3GIS8              	100.00%
Bootstrap support for H2Y1N7 as seed ortholog is 94%.
Bootstrap support for H3GIS8 as seed ortholog is 99%.

Group of orthologs #1584. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 P.ramorum:36

H2XW45              	100.00%		H3GRN0              	100.00%
Bootstrap support for H2XW45 as seed ortholog is 82%.
Bootstrap support for H3GRN0 as seed ortholog is 92%.

Group of orthologs #1585. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.ramorum:142

F6SGK0              	100.00%		H3GRL7              	100.00%
                    	       		H3GYG6              	8.41%
                    	       		H3GUC1              	5.72%
                    	       		H3GR33              	5.29%
Bootstrap support for F6SGK0 as seed ortholog is 100%.
Bootstrap support for H3GRL7 as seed ortholog is 100%.

Group of orthologs #1586. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.ramorum:142

F7A4V3              	100.00%		H3H6C7              	100.00%
                    	       		H3GRA5              	99.70%
Bootstrap support for F7A4V3 as seed ortholog is 100%.
Bootstrap support for H3H6C7 as seed ortholog is 100%.

Group of orthologs #1587. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.ramorum:142

F6QIV0              	100.00%		H3GCG0              	100.00%
Bootstrap support for F6QIV0 as seed ortholog is 100%.
Bootstrap support for H3GCG0 as seed ortholog is 100%.

Group of orthologs #1588. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.ramorum:142

F6WQE3              	100.00%		H3GBG6              	100.00%
Bootstrap support for F6WQE3 as seed ortholog is 100%.
Bootstrap support for H3GBG6 as seed ortholog is 100%.

Group of orthologs #1589. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.ramorum:142

F6ZMJ7              	100.00%		H3G8U8              	100.00%
Bootstrap support for F6ZMJ7 as seed ortholog is 100%.
Bootstrap support for H3G8U8 as seed ortholog is 100%.

Group of orthologs #1590. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.ramorum:142

H2XPR5              	100.00%		H3G8Z5              	100.00%
Bootstrap support for H2XPR5 as seed ortholog is 100%.
Bootstrap support for H3G8Z5 as seed ortholog is 100%.

Group of orthologs #1591. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.ramorum:28

F7AMD9              	100.00%		H3GHU4              	100.00%
Bootstrap support for F7AMD9 as seed ortholog is 99%.
Bootstrap support for H3GHU4 as seed ortholog is 80%.

Group of orthologs #1592. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 P.ramorum:141

F6V269              	100.00%		H3H6X7              	100.00%
H2XTI0              	17.36%		
H2XUP7              	10.88%		
Bootstrap support for F6V269 as seed ortholog is 85%.
Bootstrap support for H3H6X7 as seed ortholog is 100%.

Group of orthologs #1593. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.ramorum:71

F6PLX2              	100.00%		H3GSF7              	100.00%
Bootstrap support for F6PLX2 as seed ortholog is 100%.
Bootstrap support for H3GSF7 as seed ortholog is 96%.

Group of orthologs #1594. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.ramorum:90

F7BME9              	100.00%		H3G7M5              	100.00%
Bootstrap support for F7BME9 as seed ortholog is 100%.
Bootstrap support for H3G7M5 as seed ortholog is 99%.

Group of orthologs #1595. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.ramorum:141

F6VJL7              	100.00%		H3GNV2              	100.00%
Bootstrap support for F6VJL7 as seed ortholog is 100%.
Bootstrap support for H3GNV2 as seed ortholog is 100%.

Group of orthologs #1596. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.ramorum:141

F6ZI65              	100.00%		H3GY73              	100.00%
Bootstrap support for F6ZI65 as seed ortholog is 100%.
Bootstrap support for H3GY73 as seed ortholog is 100%.

Group of orthologs #1597. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.ramorum:6

F7AZ83              	100.00%		H3GTX9              	100.00%
F6UN86              	10.01%		H3GCN5              	25.59%
H2XNP4              	6.91%		H3GMR2              	25.25%
F6QQF5              	5.21%		H3GMF1              	25.25%
                    	       		H3HAZ5              	25.14%
                    	       		H3GMQ9              	24.69%
                    	       		H3GRZ4              	23.90%
                    	       		H3GZ86              	23.34%
                    	       		H3GXX7              	23.22%
                    	       		H3GU05              	22.66%
                    	       		H3HD37              	22.44%
                    	       		H3GMR4              	22.21%
                    	       		H3GMF0              	21.98%
                    	       		H3HAH9              	21.76%
                    	       		H3GMR1              	21.42%
                    	       		H3HD36              	21.42%
                    	       		H3GRX5              	19.95%
                    	       		H3GJF2              	17.59%
                    	       		H3GXX4              	13.87%
                    	       		H3GIU6              	12.06%
                    	       		H3GVC6              	11.16%
                    	       		H3GV91              	10.48%
                    	       		H3GVC7              	10.15%
                    	       		H3H2F7              	9.92%
                    	       		H3GC06              	9.81%
                    	       		H3H2F6              	8.79%
                    	       		H3GIC4              	7.78%
                    	       		H3GGD5              	7.67%
                    	       		H3H2G0              	7.55%
Bootstrap support for F7AZ83 as seed ortholog is 60%.
Alternative seed ortholog is F6YIF4 (44 bits away from this cluster)
Bootstrap support for H3GTX9 as seed ortholog is 55%.
Alternative seed ortholog is H3H5C0 (6 bits away from this cluster)

Group of orthologs #1598. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.ramorum:139

F6YSJ3              	39.41%		H3GWR4              	100.00%
F6VL03              	100.00%		H3GWR5              	100.00%
Q5SE06              	25.62%		H3GK27              	59.31%
F6S1J5              	20.69%		H3GK28              	54.40%
F6XRM9              	10.10%		
Bootstrap support for F6VL03 as seed ortholog is 100%.
Bootstrap support for H3GWR4 as seed ortholog is 100%.
Bootstrap support for H3GWR5 as seed ortholog is 100%.

Group of orthologs #1599. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.ramorum:139

F7AL93              	100.00%		H3H057              	100.00%
                    	       		H3H433              	100.00%
                    	       		H3H062              	90.33%
                    	       		H3HA38              	23.11%
Bootstrap support for F7AL93 as seed ortholog is 100%.
Bootstrap support for H3H057 as seed ortholog is 100%.
Bootstrap support for H3H433 as seed ortholog is 100%.

Group of orthologs #1600. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.ramorum:57

F6RWU5              	100.00%		H3GUW0              	100.00%
                    	       		H3GY66              	9.43%
                    	       		H3HC25              	7.81%
Bootstrap support for F6RWU5 as seed ortholog is 100%.
Bootstrap support for H3GUW0 as seed ortholog is 89%.

Group of orthologs #1601. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.ramorum:91

F6TSI9              	100.00%		H3GPN2              	100.00%
                    	       		H3GSC1              	23.50%
Bootstrap support for F6TSI9 as seed ortholog is 100%.
Bootstrap support for H3GPN2 as seed ortholog is 96%.

Group of orthologs #1602. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.ramorum:139

F6SAX8              	100.00%		H3GAE0              	100.00%
Bootstrap support for F6SAX8 as seed ortholog is 100%.
Bootstrap support for H3GAE0 as seed ortholog is 100%.

Group of orthologs #1603. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.ramorum:139

F6RJQ4              	100.00%		H3GPK2              	100.00%
Bootstrap support for F6RJQ4 as seed ortholog is 100%.
Bootstrap support for H3GPK2 as seed ortholog is 100%.

Group of orthologs #1604. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:139

F6R6J0              	100.00%		H3GUX4              	100.00%
Bootstrap support for F6R6J0 as seed ortholog is 98%.
Bootstrap support for H3GUX4 as seed ortholog is 100%.

Group of orthologs #1605. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.ramorum:9

F6WUA7              	100.00%		H3GQE7              	100.00%
Bootstrap support for F6WUA7 as seed ortholog is 100%.
Bootstrap support for H3GQE7 as seed ortholog is 71%.
Alternative seed ortholog is H3HCP1 (9 bits away from this cluster)

Group of orthologs #1606. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.ramorum:139

H2XTF1              	100.00%		H3GFL4              	100.00%
Bootstrap support for H2XTF1 as seed ortholog is 100%.
Bootstrap support for H3GFL4 as seed ortholog is 100%.

Group of orthologs #1607. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.ramorum:139

H2XWK5              	100.00%		H3GED7              	100.00%
Bootstrap support for H2XWK5 as seed ortholog is 100%.
Bootstrap support for H3GED7 as seed ortholog is 100%.

Group of orthologs #1608. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.ramorum:61

H2XLC7              	100.00%		H3GVL9              	100.00%
Bootstrap support for H2XLC7 as seed ortholog is 100%.
Bootstrap support for H3GVL9 as seed ortholog is 91%.

Group of orthologs #1609. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.ramorum:96

H2Y0H4              	100.00%		H3GKR1              	100.00%
Bootstrap support for H2Y0H4 as seed ortholog is 100%.
Bootstrap support for H3GKR1 as seed ortholog is 99%.

Group of orthologs #1610. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.ramorum:139

H2XWQ2              	100.00%		H3GQS8              	100.00%
Bootstrap support for H2XWQ2 as seed ortholog is 100%.
Bootstrap support for H3GQS8 as seed ortholog is 100%.

Group of orthologs #1611. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.ramorum:93

F6VAC9              	100.00%		H3HCF9              	100.00%
F6U176              	29.64%		
F6XA69              	24.09%		
Bootstrap support for F6VAC9 as seed ortholog is 100%.
Bootstrap support for H3HCF9 as seed ortholog is 99%.

Group of orthologs #1612. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.ramorum:138

F6QPH0              	100.00%		H3GUN7              	100.00%
                    	       		H3GUN4              	12.18%
Bootstrap support for F6QPH0 as seed ortholog is 100%.
Bootstrap support for H3GUN7 as seed ortholog is 100%.

Group of orthologs #1613. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.ramorum:138

L7N0S7              	100.00%		H3GQP5              	100.00%
F6RR11              	68.15%		
Bootstrap support for L7N0S7 as seed ortholog is 100%.
Bootstrap support for H3GQP5 as seed ortholog is 100%.

Group of orthologs #1614. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 P.ramorum:45

F6VCR2              	100.00%		H3G8W7              	100.00%
Bootstrap support for F6VCR2 as seed ortholog is 56%.
Alternative seed ortholog is H2XJL6 (5 bits away from this cluster)
Bootstrap support for H3G8W7 as seed ortholog is 88%.

Group of orthologs #1615. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.ramorum:138

F6ZA98              	100.00%		H3G6T3              	100.00%
Bootstrap support for F6ZA98 as seed ortholog is 100%.
Bootstrap support for H3G6T3 as seed ortholog is 100%.

Group of orthologs #1616. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.ramorum:138

F6V2B2              	100.00%		H3GV34              	100.00%
Bootstrap support for F6V2B2 as seed ortholog is 99%.
Bootstrap support for H3GV34 as seed ortholog is 100%.

Group of orthologs #1617. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.ramorum:138

H2XQB4              	100.00%		H3GDD4              	100.00%
Bootstrap support for H2XQB4 as seed ortholog is 100%.
Bootstrap support for H3GDD4 as seed ortholog is 100%.

Group of orthologs #1618. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 P.ramorum:44

F7B4V3              	100.00%		H3GXG5              	100.00%
Bootstrap support for F7B4V3 as seed ortholog is 66%.
Alternative seed ortholog is F6PN13 (14 bits away from this cluster)
Bootstrap support for H3GXG5 as seed ortholog is 89%.

Group of orthologs #1619. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.ramorum:138

F7BMN7              	100.00%		H3HB09              	100.00%
Bootstrap support for F7BMN7 as seed ortholog is 100%.
Bootstrap support for H3HB09 as seed ortholog is 100%.

Group of orthologs #1620. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.ramorum:138

Q4H3E2              	100.00%		H3HCJ4              	100.00%
Bootstrap support for Q4H3E2 as seed ortholog is 100%.
Bootstrap support for H3HCJ4 as seed ortholog is 100%.

Group of orthologs #1621. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.ramorum:137

H2XJU0              	100.00%		H3GM04              	100.00%
                    	       		H3GM05              	28.92%
                    	       		H3GLZ9              	25.62%
                    	       		H3GID8              	12.78%
                    	       		H3GI49              	9.85%
                    	       		H3GU04              	9.65%
                    	       		H3H2F2              	7.40%
Bootstrap support for H2XJU0 as seed ortholog is 100%.
Bootstrap support for H3GM04 as seed ortholog is 100%.

Group of orthologs #1622. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.ramorum:137

F6S8X6              	100.00%		H3GXW9              	100.00%
F6TP12              	100.00%		
Bootstrap support for F6S8X6 as seed ortholog is 100%.
Bootstrap support for F6TP12 as seed ortholog is 100%.
Bootstrap support for H3GXW9 as seed ortholog is 100%.

Group of orthologs #1623. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.ramorum:137

F6ZNK2              	100.00%		H3GUX6              	100.00%
F6ZUQ2              	6.32%		
Bootstrap support for F6ZNK2 as seed ortholog is 100%.
Bootstrap support for H3GUX6 as seed ortholog is 100%.

Group of orthologs #1624. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.ramorum:137

H2XNY0              	100.00%		H3GK11              	100.00%
                    	       		H3HB48              	14.00%
Bootstrap support for H2XNY0 as seed ortholog is 100%.
Bootstrap support for H3GK11 as seed ortholog is 100%.

Group of orthologs #1625. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.ramorum:137

F6ZZP5              	100.00%		H3GWU0              	100.00%
F7B8I8              	17.13%		
Bootstrap support for F6ZZP5 as seed ortholog is 100%.
Bootstrap support for H3GWU0 as seed ortholog is 100%.

Group of orthologs #1626. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.ramorum:137

F7APY2              	100.00%		H3G5I3              	100.00%
Bootstrap support for F7APY2 as seed ortholog is 100%.
Bootstrap support for H3G5I3 as seed ortholog is 100%.

Group of orthologs #1627. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.ramorum:137

F6YX11              	100.00%		H3GRX7              	100.00%
Bootstrap support for F6YX11 as seed ortholog is 100%.
Bootstrap support for H3GRX7 as seed ortholog is 100%.

Group of orthologs #1628. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:84

F6UTK0              	100.00%		H3G6Y3              	100.00%
Bootstrap support for F6UTK0 as seed ortholog is 99%.
Bootstrap support for H3G6Y3 as seed ortholog is 99%.

Group of orthologs #1629. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.ramorum:136

F6U823              	100.00%		H3GEB1              	100.00%
Bootstrap support for F6U823 as seed ortholog is 100%.
Bootstrap support for H3GEB1 as seed ortholog is 100%.

Group of orthologs #1630. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 P.ramorum:136

F6U8Q9              	100.00%		H3GJS7              	100.00%
Bootstrap support for F6U8Q9 as seed ortholog is 67%.
Alternative seed ortholog is F6R8G4 (17 bits away from this cluster)
Bootstrap support for H3GJS7 as seed ortholog is 100%.

Group of orthologs #1631. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.ramorum:136

F6ZQ39              	100.00%		H3GKM6              	100.00%
Bootstrap support for F6ZQ39 as seed ortholog is 100%.
Bootstrap support for H3GKM6 as seed ortholog is 100%.

Group of orthologs #1632. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.ramorum:136

F6XCY9              	100.00%		H3GVC5              	100.00%
Bootstrap support for F6XCY9 as seed ortholog is 100%.
Bootstrap support for H3GVC5 as seed ortholog is 100%.

Group of orthologs #1633. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.ramorum:136

H2XXD0              	100.00%		H3GXB8              	100.00%
Bootstrap support for H2XXD0 as seed ortholog is 98%.
Bootstrap support for H3GXB8 as seed ortholog is 100%.

Group of orthologs #1634. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.ramorum:32

F6XWK4              	100.00%		H3G8W3              	100.00%
                    	       		H3GB45              	100.00%
                    	       		H3H7P7              	69.36%
                    	       		H3GIR3              	44.12%
                    	       		H3GDL1              	33.53%
                    	       		H3GDX5              	28.52%
                    	       		H3HA53              	17.73%
Bootstrap support for F6XWK4 as seed ortholog is 93%.
Bootstrap support for H3G8W3 as seed ortholog is 79%.
Bootstrap support for H3GB45 as seed ortholog is 79%.

Group of orthologs #1635. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.ramorum:135

F6WF37              	100.00%		H3G6S7              	100.00%
Bootstrap support for F6WF37 as seed ortholog is 100%.
Bootstrap support for H3G6S7 as seed ortholog is 100%.

Group of orthologs #1636. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.ramorum:95

H2XSZ1              	100.00%		H3G5B7              	100.00%
Bootstrap support for H2XSZ1 as seed ortholog is 100%.
Bootstrap support for H3G5B7 as seed ortholog is 100%.

Group of orthologs #1637. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.ramorum:135

H2XVJ2              	100.00%		H3G548              	100.00%
Bootstrap support for H2XVJ2 as seed ortholog is 100%.
Bootstrap support for H3G548 as seed ortholog is 100%.

Group of orthologs #1638. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.ramorum:135

H2XZJ6              	100.00%		H3GWJ2              	100.00%
Bootstrap support for H2XZJ6 as seed ortholog is 100%.
Bootstrap support for H3GWJ2 as seed ortholog is 100%.

Group of orthologs #1639. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 P.ramorum:34

F6Z010              	100.00%		H3GN73              	100.00%
                    	       		H3GN83              	57.43%
                    	       		H3GN80              	43.63%
Bootstrap support for F6Z010 as seed ortholog is 73%.
Alternative seed ortholog is F6QAK1 (26 bits away from this cluster)
Bootstrap support for H3GN73 as seed ortholog is 80%.

Group of orthologs #1640. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.ramorum:134

F6TQ55              	100.00%		H3GDP3              	100.00%
Bootstrap support for F6TQ55 as seed ortholog is 100%.
Bootstrap support for H3GDP3 as seed ortholog is 100%.

Group of orthologs #1641. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.ramorum:35

F6YVE9              	100.00%		H3GHE5              	100.00%
Bootstrap support for F6YVE9 as seed ortholog is 88%.
Bootstrap support for H3GHE5 as seed ortholog is 86%.

Group of orthologs #1642. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.ramorum:134

F6VIZ2              	100.00%		H3GQR8              	100.00%
Bootstrap support for F6VIZ2 as seed ortholog is 100%.
Bootstrap support for H3GQR8 as seed ortholog is 100%.

Group of orthologs #1643. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.ramorum:134

F6WPS3              	100.00%		H3GNM2              	100.00%
Bootstrap support for F6WPS3 as seed ortholog is 100%.
Bootstrap support for H3GNM2 as seed ortholog is 100%.

Group of orthologs #1644. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.ramorum:134

F6XTV8              	100.00%		H3GYW5              	100.00%
Bootstrap support for F6XTV8 as seed ortholog is 100%.
Bootstrap support for H3GYW5 as seed ortholog is 100%.

Group of orthologs #1645. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.ramorum:77

Q1RPU6              	100.00%		H3G9I1              	100.00%
Bootstrap support for Q1RPU6 as seed ortholog is 100%.
Bootstrap support for H3G9I1 as seed ortholog is 99%.

Group of orthologs #1646. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.ramorum:134

H2Y3J4              	100.00%		H3GAA3              	100.00%
Bootstrap support for H2Y3J4 as seed ortholog is 100%.
Bootstrap support for H3GAA3 as seed ortholog is 100%.

Group of orthologs #1647. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.ramorum:134

F7BDS3              	100.00%		H3GVQ2              	100.00%
Bootstrap support for F7BDS3 as seed ortholog is 100%.
Bootstrap support for H3GVQ2 as seed ortholog is 100%.

Group of orthologs #1648. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.ramorum:133

F6ZUI8              	100.00%		H3H292              	100.00%
F6T1L5              	64.54%		H3H294              	77.24%
H2XW85              	16.21%		H3H967              	75.82%
H2XYR8              	16.11%		H3GQ42              	70.82%
F6UTN2              	7.34%		H3H293              	66.43%
Bootstrap support for F6ZUI8 as seed ortholog is 100%.
Bootstrap support for H3H292 as seed ortholog is 100%.

Group of orthologs #1649. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.ramorum:133

F6S9Y0              	100.00%		H3GA66              	100.00%
                    	       		H3GB57              	100.00%
Bootstrap support for F6S9Y0 as seed ortholog is 98%.
Bootstrap support for H3GA66 as seed ortholog is 100%.
Bootstrap support for H3GB57 as seed ortholog is 100%.

Group of orthologs #1650. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.ramorum:133

F6XUA1              	100.00%		H3GUF8              	100.00%
                    	       		H3HAK6              	51.25%
Bootstrap support for F6XUA1 as seed ortholog is 100%.
Bootstrap support for H3GUF8 as seed ortholog is 100%.

Group of orthologs #1651. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.ramorum:133

F6SPH4              	100.00%		H3G9L3              	100.00%
Bootstrap support for F6SPH4 as seed ortholog is 100%.
Bootstrap support for H3G9L3 as seed ortholog is 100%.

Group of orthologs #1652. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.ramorum:133

F6V580              	100.00%		H3G7F4              	100.00%
Bootstrap support for F6V580 as seed ortholog is 100%.
Bootstrap support for H3G7F4 as seed ortholog is 100%.

Group of orthologs #1653. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.ramorum:133

F6V4K8              	100.00%		H3GGW5              	100.00%
Bootstrap support for F6V4K8 as seed ortholog is 100%.
Bootstrap support for H3GGW5 as seed ortholog is 100%.

Group of orthologs #1654. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.ramorum:133

F6TMY0              	100.00%		H3GLG1              	100.00%
Bootstrap support for F6TMY0 as seed ortholog is 100%.
Bootstrap support for H3GLG1 as seed ortholog is 100%.

Group of orthologs #1655. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.ramorum:133

F7B0X0              	100.00%		H3G7J8              	100.00%
Bootstrap support for F7B0X0 as seed ortholog is 100%.
Bootstrap support for H3G7J8 as seed ortholog is 100%.

Group of orthologs #1656. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.ramorum:72

F6Q9C5              	100.00%		H3HD18              	100.00%
Bootstrap support for F6Q9C5 as seed ortholog is 96%.
Bootstrap support for H3HD18 as seed ortholog is 91%.

Group of orthologs #1657. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.ramorum:133

F7A7M7              	100.00%		H3GZN0              	100.00%
Bootstrap support for F7A7M7 as seed ortholog is 100%.
Bootstrap support for H3GZN0 as seed ortholog is 100%.

Group of orthologs #1658. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 P.ramorum:28

Q4H3E0              	100.00%		H3GCA8              	100.00%
Bootstrap support for Q4H3E0 as seed ortholog is 99%.
Bootstrap support for H3GCA8 as seed ortholog is 88%.

Group of orthologs #1659. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.ramorum:133

F6YZ79              	100.00%		H3HB68              	100.00%
Bootstrap support for F6YZ79 as seed ortholog is 100%.
Bootstrap support for H3HB68 as seed ortholog is 100%.

Group of orthologs #1660. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.ramorum:133

H2Y152              	100.00%		H3H3X6              	100.00%
Bootstrap support for H2Y152 as seed ortholog is 100%.
Bootstrap support for H3H3X6 as seed ortholog is 100%.

Group of orthologs #1661. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.ramorum:132

F7A3S4              	100.00%		H3GRP7              	100.00%
F6YQI1              	61.10%		
Bootstrap support for F7A3S4 as seed ortholog is 62%.
Alternative seed ortholog is F6VJ60 (53 bits away from this cluster)
Bootstrap support for H3GRP7 as seed ortholog is 100%.

Group of orthologs #1662. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 P.ramorum:132

F6SCE7              	100.00%		H3H3Z6              	100.00%
Bootstrap support for F6SCE7 as seed ortholog is 100%.
Bootstrap support for H3H3Z6 as seed ortholog is 100%.

Group of orthologs #1663. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 P.ramorum:132

F7BQ69              	100.00%		H3GS83              	100.00%
Bootstrap support for F7BQ69 as seed ortholog is 100%.
Bootstrap support for H3GS83 as seed ortholog is 100%.

Group of orthologs #1664. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.ramorum:132

H2XR49              	100.00%		H3HDG4              	100.00%
Bootstrap support for H2XR49 as seed ortholog is 85%.
Bootstrap support for H3HDG4 as seed ortholog is 100%.

Group of orthologs #1665. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.ramorum:131

F6Q521              	100.00%		H3GEL0              	100.00%
                    	       		H3GKJ3              	7.81%
Bootstrap support for F6Q521 as seed ortholog is 100%.
Bootstrap support for H3GEL0 as seed ortholog is 100%.

Group of orthologs #1666. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.ramorum:131

F6U5E5              	100.00%		H3G8N4              	100.00%
Bootstrap support for F6U5E5 as seed ortholog is 100%.
Bootstrap support for H3G8N4 as seed ortholog is 100%.

Group of orthologs #1667. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.ramorum:70

F6QDG1              	100.00%		H3GJ54              	100.00%
Bootstrap support for F6QDG1 as seed ortholog is 100%.
Bootstrap support for H3GJ54 as seed ortholog is 95%.

Group of orthologs #1668. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.ramorum:27

F6R9S1              	100.00%		H3GKQ4              	100.00%
Bootstrap support for F6R9S1 as seed ortholog is 93%.
Bootstrap support for H3GKQ4 as seed ortholog is 76%.

Group of orthologs #1669. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.ramorum:131

F6U1Q3              	100.00%		H3GV43              	100.00%
Bootstrap support for F6U1Q3 as seed ortholog is 93%.
Bootstrap support for H3GV43 as seed ortholog is 100%.

Group of orthologs #1670. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.ramorum:131

H2XTQ3              	100.00%		H3G531              	100.00%
Bootstrap support for H2XTQ3 as seed ortholog is 100%.
Bootstrap support for H3G531 as seed ortholog is 100%.

Group of orthologs #1671. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.ramorum:78

F6Y1W8              	100.00%		H3GTS5              	100.00%
Bootstrap support for F6Y1W8 as seed ortholog is 100%.
Bootstrap support for H3GTS5 as seed ortholog is 99%.

Group of orthologs #1672. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.ramorum:87

H2XX64              	100.00%		H3G7Q8              	100.00%
Bootstrap support for H2XX64 as seed ortholog is 100%.
Bootstrap support for H3G7Q8 as seed ortholog is 99%.

Group of orthologs #1673. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.ramorum:131

F6YQB2              	100.00%		H3GX10              	100.00%
Bootstrap support for F6YQB2 as seed ortholog is 100%.
Bootstrap support for H3GX10 as seed ortholog is 100%.

Group of orthologs #1674. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 P.ramorum:63

F6XGK4              	100.00%		H3GM16              	100.00%
F6QZW1              	20.85%		
Bootstrap support for F6XGK4 as seed ortholog is 59%.
Alternative seed ortholog is F7A5D0 (16 bits away from this cluster)
Bootstrap support for H3GM16 as seed ortholog is 56%.
Alternative seed ortholog is H3GKN1 (63 bits away from this cluster)

Group of orthologs #1675. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 P.ramorum:57

F6TER2              	100.00%		H3H344              	100.00%
F6QML6              	8.42%		
Bootstrap support for F6TER2 as seed ortholog is 59%.
Alternative seed ortholog is F6RZA6 (7 bits away from this cluster)
Bootstrap support for H3H344 as seed ortholog is 97%.

Group of orthologs #1676. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.ramorum:130

F6RE18              	100.00%		H3G8T8              	100.00%
Bootstrap support for F6RE18 as seed ortholog is 100%.
Bootstrap support for H3G8T8 as seed ortholog is 100%.

Group of orthologs #1677. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.ramorum:75

H2XY81              	100.00%		H3G8P4              	100.00%
Bootstrap support for H2XY81 as seed ortholog is 100%.
Bootstrap support for H3G8P4 as seed ortholog is 100%.

Group of orthologs #1678. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.ramorum:46

H2Y026              	100.00%		H3G991              	100.00%
Bootstrap support for H2Y026 as seed ortholog is 100%.
Bootstrap support for H3G991 as seed ortholog is 98%.

Group of orthologs #1679. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.ramorum:35

H2Y2K6              	100.00%		H3GAC5              	100.00%
F6W2S7              	28.41%		H3GAX3              	98.85%
                    	       		H3GZL7              	95.97%
Bootstrap support for H2Y2K6 as seed ortholog is 96%.
Bootstrap support for H3GAC5 as seed ortholog is 80%.

Group of orthologs #1680. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.ramorum:129

F6UJL9              	100.00%		H3GL70              	100.00%
F6QX49              	14.17%		
F6XU54              	10.12%		
Bootstrap support for F6UJL9 as seed ortholog is 100%.
Bootstrap support for H3GL70 as seed ortholog is 100%.

Group of orthologs #1681. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.ramorum:129

F6WH15              	100.00%		H3GAN1              	100.00%
Bootstrap support for F6WH15 as seed ortholog is 100%.
Bootstrap support for H3GAN1 as seed ortholog is 100%.

Group of orthologs #1682. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.ramorum:129

F6YLW1              	100.00%		H3GDA7              	100.00%
Bootstrap support for F6YLW1 as seed ortholog is 100%.
Bootstrap support for H3GDA7 as seed ortholog is 100%.

Group of orthologs #1683. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.ramorum:129

F7BK44              	100.00%		H3G850              	100.00%
Bootstrap support for F7BK44 as seed ortholog is 100%.
Bootstrap support for H3G850 as seed ortholog is 100%.

Group of orthologs #1684. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.ramorum:129

F6U8U5              	100.00%		H3GT92              	100.00%
Bootstrap support for F6U8U5 as seed ortholog is 100%.
Bootstrap support for H3GT92 as seed ortholog is 100%.

Group of orthologs #1685. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.ramorum:129

F7ATG5              	100.00%		H3GMD7              	100.00%
Bootstrap support for F7ATG5 as seed ortholog is 98%.
Bootstrap support for H3GMD7 as seed ortholog is 100%.

Group of orthologs #1686. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.ramorum:129

H2XYG3              	100.00%		H3GFL7              	100.00%
Bootstrap support for H2XYG3 as seed ortholog is 100%.
Bootstrap support for H3GFL7 as seed ortholog is 100%.

Group of orthologs #1687. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.ramorum:129

H2XYU1              	100.00%		H3GHA5              	100.00%
Bootstrap support for H2XYU1 as seed ortholog is 100%.
Bootstrap support for H3GHA5 as seed ortholog is 100%.

Group of orthologs #1688. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.ramorum:129

H2XNI2              	100.00%		H3GU63              	100.00%
Bootstrap support for H2XNI2 as seed ortholog is 100%.
Bootstrap support for H3GU63 as seed ortholog is 100%.

Group of orthologs #1689. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.ramorum:128

F6UJB5              	100.00%		H3GPE6              	100.00%
Bootstrap support for F6UJB5 as seed ortholog is 100%.
Bootstrap support for H3GPE6 as seed ortholog is 100%.

Group of orthologs #1690. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 P.ramorum:39

F7ASM2              	100.00%		H3GLU7              	100.00%
Bootstrap support for F7ASM2 as seed ortholog is 73%.
Alternative seed ortholog is F6UBJ3 (35 bits away from this cluster)
Bootstrap support for H3GLU7 as seed ortholog is 83%.

Group of orthologs #1691. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.ramorum:128

F7BMQ6              	100.00%		H3GKB4              	100.00%
Bootstrap support for F7BMQ6 as seed ortholog is 100%.
Bootstrap support for H3GKB4 as seed ortholog is 100%.

Group of orthologs #1692. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.ramorum:128

H2Y0K5              	100.00%		H3G7Q1              	100.00%
Bootstrap support for H2Y0K5 as seed ortholog is 99%.
Bootstrap support for H3G7Q1 as seed ortholog is 100%.

Group of orthologs #1693. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.ramorum:128

H2XZ71              	100.00%		H3GIJ7              	100.00%
Bootstrap support for H2XZ71 as seed ortholog is 100%.
Bootstrap support for H3GIJ7 as seed ortholog is 100%.

Group of orthologs #1694. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.ramorum:128

F6ZYA6              	100.00%		H3H4G3              	100.00%
Bootstrap support for F6ZYA6 as seed ortholog is 100%.
Bootstrap support for H3H4G3 as seed ortholog is 100%.

Group of orthologs #1695. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:57

F6VTQ0              	100.00%		H3GBM1              	100.00%
F6ULA0              	85.53%		
F6SVU6              	21.64%		
L7N0U5              	20.60%		
H2XS65              	19.44%		
F6Q966              	13.31%		
F6PND8              	10.76%		
H2Y1F0              	9.84%		
H2XKG0              	8.80%		
H2Y3K6              	7.87%		
Bootstrap support for F6VTQ0 as seed ortholog is 100%.
Bootstrap support for H3GBM1 as seed ortholog is 91%.

Group of orthologs #1696. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:127

H2XNQ0              	100.00%		H3HCQ4              	100.00%
F7AV41              	9.86%		
F6YFF3              	7.80%		
Bootstrap support for H2XNQ0 as seed ortholog is 100%.
Bootstrap support for H3HCQ4 as seed ortholog is 100%.

Group of orthologs #1697. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:127

F6YMG8              	100.00%		H3GRX8              	100.00%
                    	       		H3GG69              	48.96%
Bootstrap support for F6YMG8 as seed ortholog is 100%.
Bootstrap support for H3GRX8 as seed ortholog is 100%.

Group of orthologs #1698. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:127

Q8SSZ0              	100.00%		H3G7T5              	100.00%
                    	       		H3G6U4              	98.84%
Bootstrap support for Q8SSZ0 as seed ortholog is 100%.
Bootstrap support for H3G7T5 as seed ortholog is 100%.

Group of orthologs #1699. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:38

F7AEK6              	100.00%		H3GCZ4              	100.00%
Bootstrap support for F7AEK6 as seed ortholog is 100%.
Bootstrap support for H3GCZ4 as seed ortholog is 82%.

Group of orthologs #1700. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:127

F6Y2U7              	100.00%		H3GLU2              	100.00%
Bootstrap support for F6Y2U7 as seed ortholog is 100%.
Bootstrap support for H3GLU2 as seed ortholog is 100%.

Group of orthologs #1701. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.ramorum:26

H2XLZ2              	100.00%		H3G9S2              	100.00%
Bootstrap support for H2XLZ2 as seed ortholog is 95%.
Bootstrap support for H3G9S2 as seed ortholog is 87%.

Group of orthologs #1702. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:127

F6X6H9              	100.00%		H3GVF4              	100.00%
Bootstrap support for F6X6H9 as seed ortholog is 100%.
Bootstrap support for H3GVF4 as seed ortholog is 100%.

Group of orthologs #1703. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:127

F6VAW2              	100.00%		H3GZL9              	100.00%
Bootstrap support for F6VAW2 as seed ortholog is 100%.
Bootstrap support for H3GZL9 as seed ortholog is 100%.

Group of orthologs #1704. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:127

H2XUG9              	100.00%		H3GYU6              	100.00%
Bootstrap support for H2XUG9 as seed ortholog is 100%.
Bootstrap support for H3GYU6 as seed ortholog is 100%.

Group of orthologs #1705. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.ramorum:127

F7ACB9              	100.00%		H3HDH3              	100.00%
Bootstrap support for F7ACB9 as seed ortholog is 100%.
Bootstrap support for H3HDH3 as seed ortholog is 100%.

Group of orthologs #1706. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.ramorum:126

F6S3Q7              	100.00%		H3GT99              	100.00%
Bootstrap support for F6S3Q7 as seed ortholog is 100%.
Bootstrap support for H3GT99 as seed ortholog is 100%.

Group of orthologs #1707. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.ramorum:126

F6ULS9              	100.00%		H3GRX3              	100.00%
Bootstrap support for F6ULS9 as seed ortholog is 100%.
Bootstrap support for H3GRX3 as seed ortholog is 100%.

Group of orthologs #1708. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.ramorum:126

F7AEV2              	100.00%		H3GDZ4              	100.00%
Bootstrap support for F7AEV2 as seed ortholog is 100%.
Bootstrap support for H3GDZ4 as seed ortholog is 100%.

Group of orthologs #1709. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.ramorum:69

F7A027              	100.00%		H3GUI5              	100.00%
Bootstrap support for F7A027 as seed ortholog is 100%.
Bootstrap support for H3GUI5 as seed ortholog is 90%.

Group of orthologs #1710. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.ramorum:126

F7AWQ7              	100.00%		H3HA50              	100.00%
Bootstrap support for F7AWQ7 as seed ortholog is 100%.
Bootstrap support for H3HA50 as seed ortholog is 100%.

Group of orthologs #1711. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.ramorum:125

F6YSM6              	100.00%		H3GGB7              	100.00%
                    	       		H3GGB6              	95.05%
                    	       		H3GGB2              	67.47%
                    	       		H3GGB5              	66.80%
                    	       		H3GGC7              	65.06%
Bootstrap support for F6YSM6 as seed ortholog is 100%.
Bootstrap support for H3GGB7 as seed ortholog is 100%.

Group of orthologs #1712. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 P.ramorum:16

F6VYU2              	100.00%		H3HCA8              	100.00%
F6ZB89              	34.58%		
F6YLC8              	17.97%		
Bootstrap support for F6VYU2 as seed ortholog is 73%.
Alternative seed ortholog is F6U667 (31 bits away from this cluster)
Bootstrap support for H3HCA8 as seed ortholog is 65%.
Alternative seed ortholog is H3GYQ0 (16 bits away from this cluster)

Group of orthologs #1713. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.ramorum:125

F6V304              	100.00%		H3G9A2              	100.00%
Bootstrap support for F6V304 as seed ortholog is 100%.
Bootstrap support for H3G9A2 as seed ortholog is 100%.

Group of orthologs #1714. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.ramorum:125

F6U3H2              	100.00%		H3GLD6              	100.00%
Bootstrap support for F6U3H2 as seed ortholog is 100%.
Bootstrap support for H3GLD6 as seed ortholog is 100%.

Group of orthologs #1715. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.ramorum:40

H2XQ56              	100.00%		H3G807              	100.00%
Bootstrap support for H2XQ56 as seed ortholog is 100%.
Bootstrap support for H3G807 as seed ortholog is 99%.

Group of orthologs #1716. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.ramorum:125

H2XV86              	100.00%		H3G7Z7              	100.00%
Bootstrap support for H2XV86 as seed ortholog is 100%.
Bootstrap support for H3G7Z7 as seed ortholog is 100%.

Group of orthologs #1717. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.ramorum:125

H2XZV1              	100.00%		H3G9H2              	100.00%
Bootstrap support for H2XZV1 as seed ortholog is 100%.
Bootstrap support for H3G9H2 as seed ortholog is 100%.

Group of orthologs #1718. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.ramorum:50

H2XRI7              	100.00%		H3GI81              	100.00%
Bootstrap support for H2XRI7 as seed ortholog is 100%.
Bootstrap support for H3GI81 as seed ortholog is 93%.

Group of orthologs #1719. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.ramorum:125

F7AX45              	100.00%		H3HBL2              	100.00%
Bootstrap support for F7AX45 as seed ortholog is 100%.
Bootstrap support for H3HBL2 as seed ortholog is 100%.

Group of orthologs #1720. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 P.ramorum:124

F6YIB7              	100.00%		H3H1P5              	100.00%
                    	       		H3H1N9              	21.13%
Bootstrap support for F6YIB7 as seed ortholog is 59%.
Alternative seed ortholog is F6Q539 (10 bits away from this cluster)
Bootstrap support for H3H1P5 as seed ortholog is 100%.

Group of orthologs #1721. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.ramorum:124

F6S578              	100.00%		H3GKR7              	100.00%
Bootstrap support for F6S578 as seed ortholog is 100%.
Bootstrap support for H3GKR7 as seed ortholog is 100%.

Group of orthologs #1722. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.ramorum:124

F6WRK0              	100.00%		H3GFM4              	100.00%
Bootstrap support for F6WRK0 as seed ortholog is 100%.
Bootstrap support for H3GFM4 as seed ortholog is 100%.

Group of orthologs #1723. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.ramorum:124

F6WWT1              	100.00%		H3GGU4              	100.00%
Bootstrap support for F6WWT1 as seed ortholog is 100%.
Bootstrap support for H3GGU4 as seed ortholog is 100%.

Group of orthologs #1724. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.ramorum:124

F7ASB0              	100.00%		H3GLI2              	100.00%
Bootstrap support for F7ASB0 as seed ortholog is 100%.
Bootstrap support for H3GLI2 as seed ortholog is 100%.

Group of orthologs #1725. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.ramorum:124

F6RCD1              	100.00%		H3HBN8              	100.00%
Bootstrap support for F6RCD1 as seed ortholog is 100%.
Bootstrap support for H3HBN8 as seed ortholog is 100%.

Group of orthologs #1726. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.ramorum:124

F7AW28              	100.00%		H3H396              	100.00%
Bootstrap support for F7AW28 as seed ortholog is 100%.
Bootstrap support for H3H396 as seed ortholog is 100%.

Group of orthologs #1727. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.ramorum:124

H2XLH0              	100.00%		H3HD98              	100.00%
Bootstrap support for H2XLH0 as seed ortholog is 100%.
Bootstrap support for H3HD98 as seed ortholog is 100%.

Group of orthologs #1728. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.ramorum:124

H2XQJ8              	100.00%		H3HAY4              	100.00%
Bootstrap support for H2XQJ8 as seed ortholog is 100%.
Bootstrap support for H3HAY4 as seed ortholog is 100%.

Group of orthologs #1729. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.ramorum:43

H2XUU8              	100.00%		H3HC29              	100.00%
Bootstrap support for H2XUU8 as seed ortholog is 100%.
Bootstrap support for H3HC29 as seed ortholog is 79%.

Group of orthologs #1730. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.ramorum:123

H2XPZ6              	100.00%		H3GMT2              	100.00%
F6VTU7              	41.98%		
F6U0P5              	33.86%		
F6W9Y0              	28.96%		
F6W9J4              	12.62%		
Bootstrap support for H2XPZ6 as seed ortholog is 100%.
Bootstrap support for H3GMT2 as seed ortholog is 100%.

Group of orthologs #1731. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.ramorum:123

F6VQB3              	100.00%		H3G6F4              	100.00%
H2XML0              	50.48%		
Bootstrap support for F6VQB3 as seed ortholog is 100%.
Bootstrap support for H3G6F4 as seed ortholog is 100%.

Group of orthologs #1732. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.ramorum:26

F6R2V7              	100.00%		H3H1D6              	100.00%
Bootstrap support for F6R2V7 as seed ortholog is 100%.
Bootstrap support for H3H1D6 as seed ortholog is 78%.

Group of orthologs #1733. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.ramorum:123

F6SZQ5              	100.00%		H3H5Y1              	100.00%
Bootstrap support for F6SZQ5 as seed ortholog is 100%.
Bootstrap support for H3H5Y1 as seed ortholog is 100%.

Group of orthologs #1734. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.ramorum:123

H2XVJ4              	100.00%		H3G9A4              	100.00%
Bootstrap support for H2XVJ4 as seed ortholog is 100%.
Bootstrap support for H3G9A4 as seed ortholog is 100%.

Group of orthologs #1735. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.ramorum:123

F6W5Y6              	100.00%		H3HAU7              	100.00%
Bootstrap support for F6W5Y6 as seed ortholog is 100%.
Bootstrap support for H3HAU7 as seed ortholog is 100%.

Group of orthologs #1736. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.ramorum:123

H2XJQ7              	100.00%		H3GXG3              	100.00%
Bootstrap support for H2XJQ7 as seed ortholog is 100%.
Bootstrap support for H3GXG3 as seed ortholog is 100%.

Group of orthologs #1737. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.ramorum:21

F6VHJ0              	100.00%		H3GIR6              	100.00%
                    	       		H3GIR5              	84.55%
                    	       		H3G5J8              	34.20%
Bootstrap support for F6VHJ0 as seed ortholog is 92%.
Bootstrap support for H3GIR6 as seed ortholog is 69%.
Alternative seed ortholog is H3GZ96 (21 bits away from this cluster)

Group of orthologs #1738. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 P.ramorum:122

F6YA02              	100.00%		H3GH12              	100.00%
                    	       		H3GH13              	63.53%
Bootstrap support for F6YA02 as seed ortholog is 100%.
Bootstrap support for H3GH12 as seed ortholog is 100%.

Group of orthologs #1739. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 P.ramorum:122

F6SF30              	100.00%		H3GFI8              	100.00%
Bootstrap support for F6SF30 as seed ortholog is 100%.
Bootstrap support for H3GFI8 as seed ortholog is 100%.

Group of orthologs #1740. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 P.ramorum:122

F6PJS6              	100.00%		H3GNJ8              	100.00%
Bootstrap support for F6PJS6 as seed ortholog is 100%.
Bootstrap support for H3GNJ8 as seed ortholog is 100%.

Group of orthologs #1741. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 P.ramorum:122

F6ZH72              	100.00%		H3GSG4              	100.00%
Bootstrap support for F6ZH72 as seed ortholog is 100%.
Bootstrap support for H3GSG4 as seed ortholog is 100%.

Group of orthologs #1742. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 P.ramorum:122

H2Y1H3              	100.00%		H3G8V1              	100.00%
Bootstrap support for H2Y1H3 as seed ortholog is 100%.
Bootstrap support for H3G8V1 as seed ortholog is 100%.

Group of orthologs #1743. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 P.ramorum:76

F6T6Y7              	100.00%		H3HCW5              	100.00%
Bootstrap support for F6T6Y7 as seed ortholog is 100%.
Bootstrap support for H3HCW5 as seed ortholog is 99%.

Group of orthologs #1744. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 P.ramorum:122

H2XTT5              	100.00%		H3HDW6              	100.00%
Bootstrap support for H2XTT5 as seed ortholog is 100%.
Bootstrap support for H3HDW6 as seed ortholog is 100%.

Group of orthologs #1745. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.ramorum:121

F6PRI9              	100.00%		H3GX45              	100.00%
F6TYP3              	38.55%		
F6ZLS3              	7.01%		
F6VES6              	6.88%		
F6YSI6              	6.51%		
Bootstrap support for F6PRI9 as seed ortholog is 98%.
Bootstrap support for H3GX45 as seed ortholog is 100%.

Group of orthologs #1746. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.ramorum:121

F6PMM3              	100.00%		H3GFI7              	100.00%
Bootstrap support for F6PMM3 as seed ortholog is 100%.
Bootstrap support for H3GFI7 as seed ortholog is 100%.

Group of orthologs #1747. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.ramorum:121

C4B8X6              	100.00%		H3GKT4              	100.00%
Bootstrap support for C4B8X6 as seed ortholog is 100%.
Bootstrap support for H3GKT4 as seed ortholog is 100%.

Group of orthologs #1748. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.ramorum:121

F6XR12              	100.00%		H3G899              	100.00%
Bootstrap support for F6XR12 as seed ortholog is 100%.
Bootstrap support for H3G899 as seed ortholog is 100%.

Group of orthologs #1749. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.ramorum:121

F6TFJ1              	100.00%		H3GIE9              	100.00%
Bootstrap support for F6TFJ1 as seed ortholog is 100%.
Bootstrap support for H3GIE9 as seed ortholog is 100%.

Group of orthologs #1750. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.ramorum:121

F6YUM3              	100.00%		H3GPL8              	100.00%
Bootstrap support for F6YUM3 as seed ortholog is 100%.
Bootstrap support for H3GPL8 as seed ortholog is 100%.

Group of orthologs #1751. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.ramorum:121

H2XM57              	100.00%		H3H0L3              	100.00%
Bootstrap support for H2XM57 as seed ortholog is 100%.
Bootstrap support for H3H0L3 as seed ortholog is 100%.

Group of orthologs #1752. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.ramorum:121

H2XKA1              	100.00%		H3HAV5              	100.00%
Bootstrap support for H2XKA1 as seed ortholog is 100%.
Bootstrap support for H3HAV5 as seed ortholog is 100%.

Group of orthologs #1753. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.ramorum:26

H2XRE1              	100.00%		H3HE21              	100.00%
Bootstrap support for H2XRE1 as seed ortholog is 100%.
Bootstrap support for H3HE21 as seed ortholog is 77%.

Group of orthologs #1754. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.ramorum:121

H2Y3F1              	100.00%		H3HDW9              	100.00%
Bootstrap support for H2Y3F1 as seed ortholog is 95%.
Bootstrap support for H3HDW9 as seed ortholog is 100%.

Group of orthologs #1755. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.ramorum:120

F6WWX5              	100.00%		H3GY71              	100.00%
Bootstrap support for F6WWX5 as seed ortholog is 100%.
Bootstrap support for H3GY71 as seed ortholog is 100%.

Group of orthologs #1756. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.ramorum:20

F6XWH9              	100.00%		H3GW64              	100.00%
Bootstrap support for F6XWH9 as seed ortholog is 100%.
Bootstrap support for H3GW64 as seed ortholog is 73%.
Alternative seed ortholog is H3GFJ6 (20 bits away from this cluster)

Group of orthologs #1757. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.ramorum:120

H2XWE7              	100.00%		H3G9D5              	100.00%
Bootstrap support for H2XWE7 as seed ortholog is 100%.
Bootstrap support for H3G9D5 as seed ortholog is 100%.

Group of orthologs #1758. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.ramorum:120

F6ZBU1              	100.00%		H3H2W6              	100.00%
Bootstrap support for F6ZBU1 as seed ortholog is 100%.
Bootstrap support for H3H2W6 as seed ortholog is 100%.

Group of orthologs #1759. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.ramorum:120

F6ZAR8              	100.00%		H3HDH5              	100.00%
Bootstrap support for F6ZAR8 as seed ortholog is 100%.
Bootstrap support for H3HDH5 as seed ortholog is 100%.

Group of orthologs #1760. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.ramorum:119

F6QHN7              	100.00%		H3GC74              	100.00%
F6XQI0              	29.97%		H3GJH8              	22.45%
Bootstrap support for F6QHN7 as seed ortholog is 100%.
Bootstrap support for H3GC74 as seed ortholog is 100%.

Group of orthologs #1761. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.ramorum:119

F6X0G2              	100.00%		H3GQP6              	100.00%
H2XQ24              	7.55%		
Bootstrap support for F6X0G2 as seed ortholog is 100%.
Bootstrap support for H3GQP6 as seed ortholog is 100%.

Group of orthologs #1762. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.ramorum:119

F7BQ61              	100.00%		H3GHR4              	100.00%
H2XQ94              	31.10%		
Bootstrap support for F7BQ61 as seed ortholog is 100%.
Bootstrap support for H3GHR4 as seed ortholog is 100%.

Group of orthologs #1763. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.ramorum:119

F6PZT9              	100.00%		H3GR80              	100.00%
Bootstrap support for F6PZT9 as seed ortholog is 100%.
Bootstrap support for H3GR80 as seed ortholog is 100%.

Group of orthologs #1764. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.ramorum:119

F6XC87              	100.00%		H3GC99              	100.00%
Bootstrap support for F6XC87 as seed ortholog is 100%.
Bootstrap support for H3GC99 as seed ortholog is 100%.

Group of orthologs #1765. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.ramorum:1

F6UQ99              	100.00%		H3GPZ2              	100.00%
Bootstrap support for F6UQ99 as seed ortholog is 93%.
Bootstrap support for H3GPZ2 as seed ortholog is 52%.
Alternative seed ortholog is H3GRD8 (1 bits away from this cluster)

Group of orthologs #1766. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.ramorum:45

H2XSA5              	100.00%		H3G919              	100.00%
Bootstrap support for H2XSA5 as seed ortholog is 100%.
Bootstrap support for H3G919 as seed ortholog is 99%.

Group of orthologs #1767. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.ramorum:119

F6RR57              	100.00%		H3HBL0              	100.00%
Bootstrap support for F6RR57 as seed ortholog is 100%.
Bootstrap support for H3HBL0 as seed ortholog is 100%.

Group of orthologs #1768. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.ramorum:119

H2Y0A0              	100.00%		H3G9J7              	100.00%
Bootstrap support for H2Y0A0 as seed ortholog is 100%.
Bootstrap support for H3G9J7 as seed ortholog is 100%.

Group of orthologs #1769. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 P.ramorum:118

H2XPX5              	9.23%		H3GRH9              	100.00%
F7BHL3              	100.00%		H3GRJ0              	100.00%
F6UWG2              	100.00%		H3GRK2              	100.00%
F6WT44              	100.00%		H3GUG9              	100.00%
F6VJ33              	62.06%		H3H8K1              	92.37%
H2Y099              	9.45%		H3H4B6              	85.51%
H2XNM8              	7.54%		H3GRI9              	49.39%
F6V6U3              	6.78%		H3G6V7              	15.71%
F6S9V9              	6.76%		H3GQX9              	7.03%
F6Q162              	5.78%		
F6XTS5              	5.18%		
F6UMK0              	5.03%		
Bootstrap support for F7BHL3 as seed ortholog is 70%.
Alternative seed ortholog is F7BCE0 (19 bits away from this cluster)
Bootstrap support for F6UWG2 as seed ortholog is 37%.
Alternative seed ortholog is F7BCE0 (19 bits away from this cluster)
Bootstrap support for F6WT44 as seed ortholog is 36%.
Alternative seed ortholog is F7BCE0 (19 bits away from this cluster)
Bootstrap support for H3GRH9 as seed ortholog is 100%.
Bootstrap support for H3GRJ0 as seed ortholog is 100%.
Bootstrap support for H3GRK2 as seed ortholog is 100%.
Bootstrap support for H3GUG9 as seed ortholog is 100%.

Group of orthologs #1770. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 P.ramorum:118

F6RAU0              	100.00%		H3GWH4              	100.00%
F6YLU7              	14.86%		H3GAF6              	25.73%
K9J6P3              	14.62%		H3GAF5              	25.73%
F7AS68              	14.39%		H3H0D1              	23.49%
F7ASG9              	12.03%		H3GLZ1              	21.03%
                    	       		H3H6S1              	16.11%
                    	       		H3HC53              	12.08%
                    	       		H3H1Y1              	9.40%
Bootstrap support for F6RAU0 as seed ortholog is 69%.
Alternative seed ortholog is F7BCE0 (19 bits away from this cluster)
Bootstrap support for H3GWH4 as seed ortholog is 100%.

Group of orthologs #1771. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.ramorum:118

F6PID9              	100.00%		H3GV31              	100.00%
F6WI80              	41.70%		H3GN17              	41.66%
H2XV50              	35.80%		H3GDE2              	21.42%
F7AWK4              	35.09%		
F6U005              	32.42%		
H2Y0N3              	28.72%		
F6Z015              	20.54%		
Bootstrap support for F6PID9 as seed ortholog is 100%.
Bootstrap support for H3GV31 as seed ortholog is 100%.

Group of orthologs #1772. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 P.ramorum:118

F6Z3A0              	100.00%		H3H329              	100.00%
                    	       		H3H328              	51.49%
                    	       		H3H341              	39.29%
                    	       		H3HEB8              	38.99%
                    	       		H3GXC3              	27.38%
                    	       		H3H342              	27.08%
Bootstrap support for F6Z3A0 as seed ortholog is 78%.
Bootstrap support for H3H329 as seed ortholog is 100%.

Group of orthologs #1773. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.ramorum:25

H2XY86              	100.00%		H3GY93              	100.00%
H2XXC3              	6.24%		H3GWV7              	10.54%
Bootstrap support for H2XY86 as seed ortholog is 100%.
Bootstrap support for H3GY93 as seed ortholog is 65%.
Alternative seed ortholog is H3GVY5 (25 bits away from this cluster)

Group of orthologs #1774. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.ramorum:118

F6VPU4              	100.00%		H3G8A6              	100.00%
Bootstrap support for F6VPU4 as seed ortholog is 100%.
Bootstrap support for H3G8A6 as seed ortholog is 100%.

Group of orthologs #1775. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.ramorum:118

H2XTZ1              	100.00%		H3G581              	100.00%
Bootstrap support for H2XTZ1 as seed ortholog is 100%.
Bootstrap support for H3G581 as seed ortholog is 100%.

Group of orthologs #1776. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.ramorum:118

F6R5V5              	100.00%		H3H5Q4              	100.00%
Bootstrap support for F6R5V5 as seed ortholog is 100%.
Bootstrap support for H3H5Q4 as seed ortholog is 100%.

Group of orthologs #1777. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.ramorum:118

H2XR59              	100.00%		H3GCB5              	100.00%
Bootstrap support for H2XR59 as seed ortholog is 100%.
Bootstrap support for H3GCB5 as seed ortholog is 100%.

Group of orthologs #1778. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.ramorum:118

F6VKK3              	100.00%		H3H1K0              	100.00%
Bootstrap support for F6VKK3 as seed ortholog is 100%.
Bootstrap support for H3H1K0 as seed ortholog is 100%.

Group of orthologs #1779. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.ramorum:118

F6UM67              	100.00%		H3HAS4              	100.00%
Bootstrap support for F6UM67 as seed ortholog is 100%.
Bootstrap support for H3HAS4 as seed ortholog is 100%.

Group of orthologs #1780. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 P.ramorum:118

F7ATN8              	100.00%		H3GXT3              	100.00%
Bootstrap support for F7ATN8 as seed ortholog is 83%.
Bootstrap support for H3GXT3 as seed ortholog is 100%.

Group of orthologs #1781. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.ramorum:118

Q4H2R5              	100.00%		H3GKS2              	100.00%
Bootstrap support for Q4H2R5 as seed ortholog is 100%.
Bootstrap support for H3GKS2 as seed ortholog is 100%.

Group of orthologs #1782. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.ramorum:117

F6RKR7              	100.00%		H3G562              	100.00%
Bootstrap support for F6RKR7 as seed ortholog is 100%.
Bootstrap support for H3G562 as seed ortholog is 100%.

Group of orthologs #1783. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 P.ramorum:117

H2XQH7              	100.00%		H3GMU6              	100.00%
Bootstrap support for H2XQH7 as seed ortholog is 95%.
Bootstrap support for H3GMU6 as seed ortholog is 100%.

Group of orthologs #1784. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.ramorum:116

F7AUY7              	100.00%		H3GDF7              	100.00%
                    	       		H3GZW6              	25.31%
Bootstrap support for F7AUY7 as seed ortholog is 100%.
Bootstrap support for H3GDF7 as seed ortholog is 100%.

Group of orthologs #1785. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.ramorum:116

F6YF30              	100.00%		H3G703              	100.00%
Bootstrap support for F6YF30 as seed ortholog is 100%.
Bootstrap support for H3G703 as seed ortholog is 100%.

Group of orthologs #1786. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.ramorum:116

F6Q3L6              	100.00%		H3GU82              	100.00%
Bootstrap support for F6Q3L6 as seed ortholog is 100%.
Bootstrap support for H3GU82 as seed ortholog is 100%.

Group of orthologs #1787. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 P.ramorum:40

F6U5L2              	100.00%		H3GM53              	100.00%
Bootstrap support for F6U5L2 as seed ortholog is 81%.
Bootstrap support for H3GM53 as seed ortholog is 92%.

Group of orthologs #1788. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.ramorum:116

F6RPW8              	100.00%		H3H008              	100.00%
Bootstrap support for F6RPW8 as seed ortholog is 100%.
Bootstrap support for H3H008 as seed ortholog is 100%.

Group of orthologs #1789. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.ramorum:116

F6TPI3              	100.00%		H3GZT9              	100.00%
Bootstrap support for F6TPI3 as seed ortholog is 100%.
Bootstrap support for H3GZT9 as seed ortholog is 100%.

Group of orthologs #1790. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.ramorum:31

F6X8B5              	100.00%		H3GVJ8              	100.00%
Bootstrap support for F6X8B5 as seed ortholog is 100%.
Bootstrap support for H3GVJ8 as seed ortholog is 82%.

Group of orthologs #1791. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.ramorum:27

F6VLD0              	100.00%		H3HE01              	100.00%
Bootstrap support for F6VLD0 as seed ortholog is 100%.
Bootstrap support for H3HE01 as seed ortholog is 77%.

Group of orthologs #1792. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.ramorum:69

H2XM23              	100.00%		H3GY17              	100.00%
Bootstrap support for H2XM23 as seed ortholog is 96%.
Bootstrap support for H3GY17 as seed ortholog is 95%.

Group of orthologs #1793. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.ramorum:116

H2Y1K9              	100.00%		H3GJ95              	100.00%
Bootstrap support for H2Y1K9 as seed ortholog is 100%.
Bootstrap support for H3GJ95 as seed ortholog is 100%.

Group of orthologs #1794. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.ramorum:116

H2XM66              	100.00%		H3HBG2              	100.00%
Bootstrap support for H2XM66 as seed ortholog is 100%.
Bootstrap support for H3HBG2 as seed ortholog is 100%.

Group of orthologs #1795. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.ramorum:64

H2XPJ1              	100.00%		H3GIC5              	100.00%
F6S5X9              	100.00%		H3G513              	100.00%
F7B3V5              	32.34%		
H2Y356              	29.55%		
F6UVE4              	22.30%		
F6W7J8              	18.91%		
Bootstrap support for H2XPJ1 as seed ortholog is 100%.
Bootstrap support for F6S5X9 as seed ortholog is 100%.
Bootstrap support for H3GIC5 as seed ortholog is 95%.
Bootstrap support for H3G513 as seed ortholog is 86%.

Group of orthologs #1796. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.ramorum:115

F6W2G3              	100.00%		H3GCE4              	100.00%
F6V176              	66.45%		H3GCE3              	66.16%
F6X1R3              	37.32%		
Bootstrap support for F6W2G3 as seed ortholog is 100%.
Bootstrap support for H3GCE4 as seed ortholog is 100%.

Group of orthologs #1797. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.ramorum:115

F6PZM1              	100.00%		H3GA96              	100.00%
Bootstrap support for F6PZM1 as seed ortholog is 100%.
Bootstrap support for H3GA96 as seed ortholog is 100%.

Group of orthologs #1798. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.ramorum:115

F6PR01              	100.00%		H3GK24              	100.00%
Bootstrap support for F6PR01 as seed ortholog is 100%.
Bootstrap support for H3GK24 as seed ortholog is 100%.

Group of orthologs #1799. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.ramorum:5

F6SV73              	100.00%		H3GVK9              	100.00%
Bootstrap support for F6SV73 as seed ortholog is 100%.
Bootstrap support for H3GVK9 as seed ortholog is 43%.
Alternative seed ortholog is H3GLI3 (5 bits away from this cluster)

Group of orthologs #1800. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 P.ramorum:115

H2XUW4              	100.00%		H3G861              	100.00%
Bootstrap support for H2XUW4 as seed ortholog is 68%.
Alternative seed ortholog is F6Y5B7 (14 bits away from this cluster)
Bootstrap support for H3G861 as seed ortholog is 100%.

Group of orthologs #1801. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.ramorum:115

H2XWG7              	100.00%		H3G9P5              	100.00%
Bootstrap support for H2XWG7 as seed ortholog is 100%.
Bootstrap support for H3G9P5 as seed ortholog is 100%.

Group of orthologs #1802. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.ramorum:115

F7BIJ9              	100.00%		H3GNV3              	100.00%
Bootstrap support for F7BIJ9 as seed ortholog is 100%.
Bootstrap support for H3GNV3 as seed ortholog is 100%.

Group of orthologs #1803. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:115

H2XTW5              	100.00%		H3GXB7              	100.00%
Bootstrap support for H2XTW5 as seed ortholog is 96%.
Bootstrap support for H3GXB7 as seed ortholog is 100%.

Group of orthologs #1804. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.ramorum:46

H2XSQ8              	100.00%		H3HCV1              	100.00%
Bootstrap support for H2XSQ8 as seed ortholog is 100%.
Bootstrap support for H3HCV1 as seed ortholog is 99%.

Group of orthologs #1805. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.ramorum:32

F6WSV3              	100.00%		H3GHZ1              	100.00%
                    	       		H3GCV3              	58.23%
                    	       		H3GMZ5              	6.49%
Bootstrap support for F6WSV3 as seed ortholog is 100%.
Bootstrap support for H3GHZ1 as seed ortholog is 78%.

Group of orthologs #1806. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.ramorum:114

F6XCL4              	100.00%		H3GHD5              	100.00%
Bootstrap support for F6XCL4 as seed ortholog is 100%.
Bootstrap support for H3GHD5 as seed ortholog is 100%.

Group of orthologs #1807. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.ramorum:114

H2XKM5              	100.00%		H3GA26              	100.00%
Bootstrap support for H2XKM5 as seed ortholog is 100%.
Bootstrap support for H3GA26 as seed ortholog is 100%.

Group of orthologs #1808. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.ramorum:114

F7A5L4              	100.00%		H3GFY1              	100.00%
Bootstrap support for F7A5L4 as seed ortholog is 100%.
Bootstrap support for H3GFY1 as seed ortholog is 100%.

Group of orthologs #1809. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.ramorum:42

H2Y2G7              	100.00%		H3G813              	100.00%
Bootstrap support for H2Y2G7 as seed ortholog is 99%.
Bootstrap support for H3G813 as seed ortholog is 99%.

Group of orthologs #1810. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.ramorum:114

F6ZCI6              	100.00%		H3GYE0              	100.00%
Bootstrap support for F6ZCI6 as seed ortholog is 100%.
Bootstrap support for H3GYE0 as seed ortholog is 100%.

Group of orthologs #1811. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.ramorum:114

F6TZC4              	100.00%		H3HCX3              	100.00%
Bootstrap support for F6TZC4 as seed ortholog is 100%.
Bootstrap support for H3HCX3 as seed ortholog is 100%.

Group of orthologs #1812. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.ramorum:114

F6WIP7              	100.00%		H3HAU1              	100.00%
Bootstrap support for F6WIP7 as seed ortholog is 100%.
Bootstrap support for H3HAU1 as seed ortholog is 100%.

Group of orthologs #1813. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.ramorum:114

F6Y5E9              	100.00%		H3HAC3              	100.00%
Bootstrap support for F6Y5E9 as seed ortholog is 100%.
Bootstrap support for H3HAC3 as seed ortholog is 100%.

Group of orthologs #1814. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.ramorum:114

F7AG43              	100.00%		H3HBK6              	100.00%
Bootstrap support for F7AG43 as seed ortholog is 100%.
Bootstrap support for H3HBK6 as seed ortholog is 100%.

Group of orthologs #1815. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 P.ramorum:114

Q1RPW1              	100.00%		H3GTM4              	100.00%
Bootstrap support for Q1RPW1 as seed ortholog is 67%.
Alternative seed ortholog is F6UMH6 (22 bits away from this cluster)
Bootstrap support for H3GTM4 as seed ortholog is 100%.

Group of orthologs #1816. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.ramorum:113

F6QMA7              	100.00%		H3GAW2              	100.00%
H2XPQ4              	21.74%		H3GB35              	100.00%
                    	       		H3H4G7              	78.05%
                    	       		H3GFV7              	42.28%
Bootstrap support for F6QMA7 as seed ortholog is 100%.
Bootstrap support for H3GAW2 as seed ortholog is 100%.
Bootstrap support for H3GB35 as seed ortholog is 100%.

Group of orthologs #1817. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.ramorum:113

F6ZPY9              	100.00%		H3GQW4              	100.00%
                    	       		H3GQX1              	40.65%
                    	       		H3GQX3              	33.13%
Bootstrap support for F6ZPY9 as seed ortholog is 100%.
Bootstrap support for H3GQW4 as seed ortholog is 100%.

Group of orthologs #1818. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.ramorum:113

F6V1C0              	100.00%		H3G714              	100.00%
Bootstrap support for F6V1C0 as seed ortholog is 100%.
Bootstrap support for H3G714 as seed ortholog is 100%.

Group of orthologs #1819. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.ramorum:113

F6Y4F7              	100.00%		H3GG59              	100.00%
Bootstrap support for F6Y4F7 as seed ortholog is 100%.
Bootstrap support for H3GG59 as seed ortholog is 100%.

Group of orthologs #1820. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.ramorum:113

F6RVB8              	100.00%		H3GXQ9              	100.00%
Bootstrap support for F6RVB8 as seed ortholog is 100%.
Bootstrap support for H3GXQ9 as seed ortholog is 100%.

Group of orthologs #1821. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.ramorum:113

F6ZF76              	100.00%		H3GVD1              	100.00%
Bootstrap support for F6ZF76 as seed ortholog is 100%.
Bootstrap support for H3GVD1 as seed ortholog is 100%.

Group of orthologs #1822. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.ramorum:113

Q1RL40              	100.00%		H3GLZ6              	100.00%
Bootstrap support for Q1RL40 as seed ortholog is 100%.
Bootstrap support for H3GLZ6 as seed ortholog is 100%.

Group of orthologs #1823. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.ramorum:113

H2XNU4              	100.00%		H3H4J8              	100.00%
Bootstrap support for H2XNU4 as seed ortholog is 100%.
Bootstrap support for H3H4J8 as seed ortholog is 100%.

Group of orthologs #1824. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.ramorum:41

F7A1A8              	100.00%		H3GB38              	100.00%
                    	       		H3H693              	58.63%
                    	       		H3G9B1              	52.60%
                    	       		H3GB41              	52.39%
                    	       		H3GB51              	51.35%
                    	       		H3H2H7              	43.66%
                    	       		H3GAN2              	42.62%
                    	       		H3GCM6              	40.12%
                    	       		H3GYK9              	29.73%
                    	       		H3H9Y4              	18.09%
                    	       		H3HA55              	17.67%
                    	       		H3H6L3              	17.26%
                    	       		H3H765              	13.31%
                    	       		H3H6Y2              	12.06%
                    	       		H3HA33              	11.02%
                    	       		H3H799              	9.56%
                    	       		H3H6Z7              	9.36%
                    	       		H3GDT3              	9.15%
                    	       		H3GB19              	5.41%
Bootstrap support for F7A1A8 as seed ortholog is 100%.
Bootstrap support for H3GB38 as seed ortholog is 94%.

Group of orthologs #1825. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.ramorum:112

F6U189              	100.00%		H3GJN9              	100.00%
F6VBW9              	9.68%		
Bootstrap support for F6U189 as seed ortholog is 100%.
Bootstrap support for H3GJN9 as seed ortholog is 100%.

Group of orthologs #1826. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 P.ramorum:23

F6TTC3              	100.00%		H3GRI1              	100.00%
                    	       		H3H9P6              	43.99%
Bootstrap support for F6TTC3 as seed ortholog is 91%.
Bootstrap support for H3GRI1 as seed ortholog is 69%.
Alternative seed ortholog is H3GXH6 (23 bits away from this cluster)

Group of orthologs #1827. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.ramorum:40

F6PWM6              	100.00%		H3GBU4              	100.00%
Bootstrap support for F6PWM6 as seed ortholog is 100%.
Bootstrap support for H3GBU4 as seed ortholog is 84%.

Group of orthologs #1828. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.ramorum:112

F6QW72              	100.00%		H3GGR7              	100.00%
Bootstrap support for F6QW72 as seed ortholog is 100%.
Bootstrap support for H3GGR7 as seed ortholog is 100%.

Group of orthologs #1829. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.ramorum:112

F6ZQH5              	100.00%		H3G7D9              	100.00%
Bootstrap support for F6ZQH5 as seed ortholog is 100%.
Bootstrap support for H3G7D9 as seed ortholog is 100%.

Group of orthologs #1830. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.ramorum:112

F7B496              	100.00%		H3GGW6              	100.00%
Bootstrap support for F7B496 as seed ortholog is 100%.
Bootstrap support for H3GGW6 as seed ortholog is 100%.

Group of orthologs #1831. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.ramorum:112

F6VD75              	100.00%		H3GZE2              	100.00%
Bootstrap support for F6VD75 as seed ortholog is 100%.
Bootstrap support for H3GZE2 as seed ortholog is 100%.

Group of orthologs #1832. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.ramorum:112

F6W7H5              	100.00%		H3HDX2              	100.00%
Bootstrap support for F6W7H5 as seed ortholog is 100%.
Bootstrap support for H3HDX2 as seed ortholog is 100%.

Group of orthologs #1833. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.ramorum:112

H2Y3F6              	100.00%		H3GLC5              	100.00%
Bootstrap support for H2Y3F6 as seed ortholog is 100%.
Bootstrap support for H3GLC5 as seed ortholog is 100%.

Group of orthologs #1834. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.ramorum:112

F6YBL5              	100.00%		H3HEG7              	100.00%
Bootstrap support for F6YBL5 as seed ortholog is 92%.
Bootstrap support for H3HEG7 as seed ortholog is 100%.

Group of orthologs #1835. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.ramorum:112

H2XQA6              	100.00%		H3HC69              	100.00%
Bootstrap support for H2XQA6 as seed ortholog is 100%.
Bootstrap support for H3HC69 as seed ortholog is 100%.

Group of orthologs #1836. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.ramorum:112

H2XRS4              	100.00%		H3HE77              	100.00%
Bootstrap support for H2XRS4 as seed ortholog is 100%.
Bootstrap support for H3HE77 as seed ortholog is 100%.

Group of orthologs #1837. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.ramorum:46

F6SYR3              	100.00%		H3GIU0              	100.00%
F7B7S8              	25.25%		H3GIU4              	42.02%
F6ZE10              	5.66%		H3GIU5              	42.02%
                    	       		H3GIV5              	35.73%
                    	       		H3GIV6              	34.83%
                    	       		H3GIU2              	34.83%
                    	       		H3GIU3              	29.89%
                    	       		H3GUL6              	7.42%
Bootstrap support for F6SYR3 as seed ortholog is 100%.
Bootstrap support for H3GIU0 as seed ortholog is 90%.

Group of orthologs #1838. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 P.ramorum:111

F6S925              	100.00%		H3GJ58              	100.00%
F6S909              	41.65%		
Q4H398              	36.79%		
Q4H396              	24.31%		
Bootstrap support for F6S925 as seed ortholog is 55%.
Alternative seed ortholog is H2XMY4 (8 bits away from this cluster)
Bootstrap support for H3GJ58 as seed ortholog is 100%.

Group of orthologs #1839. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 P.ramorum:19

F6RYV9              	100.00%		H3GCJ5              	100.00%
Bootstrap support for F6RYV9 as seed ortholog is 77%.
Bootstrap support for H3GCJ5 as seed ortholog is 67%.
Alternative seed ortholog is H3GR84 (19 bits away from this cluster)

Group of orthologs #1840. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.ramorum:111

F6VXS0              	100.00%		H3G8L4              	100.00%
Bootstrap support for F6VXS0 as seed ortholog is 100%.
Bootstrap support for H3G8L4 as seed ortholog is 100%.

Group of orthologs #1841. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.ramorum:111

F7AI05              	100.00%		H3G770              	100.00%
Bootstrap support for F7AI05 as seed ortholog is 100%.
Bootstrap support for H3G770 as seed ortholog is 100%.

Group of orthologs #1842. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.ramorum:111

F7B3X8              	100.00%		H3GCK2              	100.00%
Bootstrap support for F7B3X8 as seed ortholog is 100%.
Bootstrap support for H3GCK2 as seed ortholog is 100%.

Group of orthologs #1843. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.ramorum:111

H2XK95              	100.00%		H3GL41              	100.00%
Bootstrap support for H2XK95 as seed ortholog is 100%.
Bootstrap support for H3GL41 as seed ortholog is 100%.

Group of orthologs #1844. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.ramorum:111

F6YHE2              	100.00%		H3GW72              	100.00%
Bootstrap support for F6YHE2 as seed ortholog is 100%.
Bootstrap support for H3GW72 as seed ortholog is 100%.

Group of orthologs #1845. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.ramorum:111

F7B6C9              	100.00%		H3GTA3              	100.00%
Bootstrap support for F7B6C9 as seed ortholog is 100%.
Bootstrap support for H3GTA3 as seed ortholog is 100%.

Group of orthologs #1846. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 P.ramorum:44

F6YS37              	100.00%		H3HBK5              	100.00%
Bootstrap support for F6YS37 as seed ortholog is 72%.
Alternative seed ortholog is H2XMU3 (24 bits away from this cluster)
Bootstrap support for H3HBK5 as seed ortholog is 89%.

Group of orthologs #1847. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.ramorum:36

H2XXB3              	100.00%		H3H0J1              	100.00%
Bootstrap support for H2XXB3 as seed ortholog is 97%.
Bootstrap support for H3H0J1 as seed ortholog is 96%.

Group of orthologs #1848. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.ramorum:21

F6T9N5              	100.00%		H3G6W9              	100.00%
                    	       		H3G5P1              	75.69%
                    	       		H3H2W7              	56.35%
                    	       		H3H7J5              	44.94%
                    	       		H3G5J2              	27.99%
Bootstrap support for F6T9N5 as seed ortholog is 90%.
Bootstrap support for H3G6W9 as seed ortholog is 74%.
Alternative seed ortholog is H3HA11 (21 bits away from this cluster)

Group of orthologs #1849. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.ramorum:46

F6ZTY6              	100.00%		H3GUA5              	100.00%
                    	       		H3GUA6              	31.66%
Bootstrap support for F6ZTY6 as seed ortholog is 100%.
Bootstrap support for H3GUA5 as seed ortholog is 86%.

Group of orthologs #1850. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.ramorum:110

F7AF59              	100.00%		H3G5D0              	100.00%
Bootstrap support for F7AF59 as seed ortholog is 100%.
Bootstrap support for H3G5D0 as seed ortholog is 100%.

Group of orthologs #1851. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.ramorum:110

F7B012              	100.00%		H3G8Z6              	100.00%
Bootstrap support for F7B012 as seed ortholog is 99%.
Bootstrap support for H3G8Z6 as seed ortholog is 100%.

Group of orthologs #1852. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 P.ramorum:110

F6Z8S6              	100.00%		H3GMV3              	100.00%
Bootstrap support for F6Z8S6 as seed ortholog is 74%.
Alternative seed ortholog is F6S0J6 (27 bits away from this cluster)
Bootstrap support for H3GMV3 as seed ortholog is 100%.

Group of orthologs #1853. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.ramorum:110

F6YG52              	100.00%		H3GWV8              	100.00%
Bootstrap support for F6YG52 as seed ortholog is 100%.
Bootstrap support for H3GWV8 as seed ortholog is 100%.

Group of orthologs #1854. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 P.ramorum:110

F7BPM3              	100.00%		H3H037              	100.00%
Bootstrap support for F7BPM3 as seed ortholog is 82%.
Bootstrap support for H3H037 as seed ortholog is 100%.

Group of orthologs #1855. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.ramorum:109

F6U899              	100.00%		H3GIJ0              	100.00%
                    	       		H3GTD0              	23.05%
                    	       		H3GT88              	10.04%
                    	       		H3GT89              	8.18%
Bootstrap support for F6U899 as seed ortholog is 100%.
Bootstrap support for H3GIJ0 as seed ortholog is 100%.

Group of orthologs #1856. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.ramorum:109

F6WU12              	100.00%		H3H918              	100.00%
F6QRU4              	7.54%		
Bootstrap support for F6WU12 as seed ortholog is 96%.
Bootstrap support for H3H918 as seed ortholog is 100%.

Group of orthologs #1857. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.ramorum:66

F6PM95              	100.00%		H3GDV9              	100.00%
Bootstrap support for F6PM95 as seed ortholog is 100%.
Bootstrap support for H3GDV9 as seed ortholog is 94%.

Group of orthologs #1858. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.ramorum:109

F6V7G7              	100.00%		H3G6D7              	100.00%
Bootstrap support for F6V7G7 as seed ortholog is 100%.
Bootstrap support for H3G6D7 as seed ortholog is 100%.

Group of orthologs #1859. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 P.ramorum:109

F6RUS9              	100.00%		H3GES3              	100.00%
Bootstrap support for F6RUS9 as seed ortholog is 83%.
Bootstrap support for H3GES3 as seed ortholog is 100%.

Group of orthologs #1860. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.ramorum:27

F6RDE8              	100.00%		H3GKI4              	100.00%
Bootstrap support for F6RDE8 as seed ortholog is 100%.
Bootstrap support for H3GKI4 as seed ortholog is 97%.

Group of orthologs #1861. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.ramorum:109

F7ANQ7              	100.00%		H3G840              	100.00%
Bootstrap support for F7ANQ7 as seed ortholog is 100%.
Bootstrap support for H3G840 as seed ortholog is 100%.

Group of orthologs #1862. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.ramorum:109

H2XKP6              	100.00%		H3GDP2              	100.00%
Bootstrap support for H2XKP6 as seed ortholog is 100%.
Bootstrap support for H3GDP2 as seed ortholog is 100%.

Group of orthologs #1863. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.ramorum:109

H2XNC6              	100.00%		H3GFM2              	100.00%
Bootstrap support for H2XNC6 as seed ortholog is 100%.
Bootstrap support for H3GFM2 as seed ortholog is 100%.

Group of orthologs #1864. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.ramorum:109

H2XXZ1              	100.00%		H3GGY0              	100.00%
Bootstrap support for H2XXZ1 as seed ortholog is 100%.
Bootstrap support for H3GGY0 as seed ortholog is 100%.

Group of orthologs #1865. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.ramorum:109

H2XZ21              	100.00%		H3HD81              	100.00%
Bootstrap support for H2XZ21 as seed ortholog is 100%.
Bootstrap support for H3HD81 as seed ortholog is 100%.

Group of orthologs #1866. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 P.ramorum:108

F7AUS4              	100.00%		H3H1L0              	100.00%
                    	       		H3H867              	69.72%
Bootstrap support for F7AUS4 as seed ortholog is 80%.
Bootstrap support for H3H1L0 as seed ortholog is 100%.

Group of orthologs #1867. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.ramorum:108

F6QEH8              	100.00%		H3GBU9              	100.00%
Bootstrap support for F6QEH8 as seed ortholog is 100%.
Bootstrap support for H3GBU9 as seed ortholog is 100%.

Group of orthologs #1868. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.ramorum:108

F6UE09              	100.00%		H3G9S6              	100.00%
Bootstrap support for F6UE09 as seed ortholog is 100%.
Bootstrap support for H3G9S6 as seed ortholog is 100%.

Group of orthologs #1869. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.ramorum:108

F6XQP8              	100.00%		H3GMF9              	100.00%
Bootstrap support for F6XQP8 as seed ortholog is 100%.
Bootstrap support for H3GMF9 as seed ortholog is 100%.

Group of orthologs #1870. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.ramorum:108

F7BHR3              	100.00%		H3GEF9              	100.00%
Bootstrap support for F7BHR3 as seed ortholog is 100%.
Bootstrap support for H3GEF9 as seed ortholog is 100%.

Group of orthologs #1871. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.ramorum:51

Q4H3J8              	100.00%		H3GT64              	100.00%
Bootstrap support for Q4H3J8 as seed ortholog is 100%.
Bootstrap support for H3GT64 as seed ortholog is 70%.
Alternative seed ortholog is H3GDL4 (51 bits away from this cluster)

Group of orthologs #1872. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.ramorum:108

H2XY20              	100.00%		H3GZT3              	100.00%
Bootstrap support for H2XY20 as seed ortholog is 100%.
Bootstrap support for H3GZT3 as seed ortholog is 100%.

Group of orthologs #1873. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.ramorum:108

H2XX21              	100.00%		H3H8E5              	100.00%
Bootstrap support for H2XX21 as seed ortholog is 100%.
Bootstrap support for H3H8E5 as seed ortholog is 100%.

Group of orthologs #1874. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.ramorum:107

F6T0U6              	100.00%		H3H463              	100.00%
                    	       		H3H464              	75.28%
                    	       		H3H465              	67.04%
                    	       		H3GHW3              	34.57%
                    	       		H3GN42              	27.79%
                    	       		H3GWE4              	24.23%
                    	       		H3GFS5              	23.75%
                    	       		H3GFS6              	23.42%
                    	       		H3GFS4              	22.46%
                    	       		H3GRY6              	21.49%
                    	       		H3GF99              	19.06%
                    	       		H3GXR9              	18.58%
Bootstrap support for F6T0U6 as seed ortholog is 100%.
Bootstrap support for H3H463 as seed ortholog is 100%.

Group of orthologs #1875. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.ramorum:107

F7B2X5              	100.00%		H3GCT8              	100.00%
                    	       		H3GCT9              	40.95%
                    	       		H3GJ38              	25.99%
Bootstrap support for F7B2X5 as seed ortholog is 100%.
Bootstrap support for H3GCT8 as seed ortholog is 100%.

Group of orthologs #1876. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.ramorum:107

F6TJA4              	100.00%		H3HA69              	100.00%
                    	       		H3H9T6              	86.82%
Bootstrap support for F6TJA4 as seed ortholog is 100%.
Bootstrap support for H3HA69 as seed ortholog is 100%.

Group of orthologs #1877. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.ramorum:107

F6X073              	100.00%		H3G550              	100.00%
Bootstrap support for F6X073 as seed ortholog is 100%.
Bootstrap support for H3G550 as seed ortholog is 100%.

Group of orthologs #1878. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.ramorum:107

F6VKW3              	100.00%		H3GH30              	100.00%
Bootstrap support for F6VKW3 as seed ortholog is 100%.
Bootstrap support for H3GH30 as seed ortholog is 100%.

Group of orthologs #1879. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.ramorum:107

F6SRD6              	100.00%		H3H3V1              	100.00%
Bootstrap support for F6SRD6 as seed ortholog is 100%.
Bootstrap support for H3H3V1 as seed ortholog is 100%.

Group of orthologs #1880. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.ramorum:107

H2XLK9              	100.00%		H3GMN0              	100.00%
Bootstrap support for H2XLK9 as seed ortholog is 100%.
Bootstrap support for H3GMN0 as seed ortholog is 100%.

Group of orthologs #1881. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.ramorum:34

H2XK82              	100.00%		H3GZV7              	100.00%
Bootstrap support for H2XK82 as seed ortholog is 100%.
Bootstrap support for H3GZV7 as seed ortholog is 87%.

Group of orthologs #1882. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.ramorum:26

H2XJI9              	100.00%		H3H3N8              	100.00%
Bootstrap support for H2XJI9 as seed ortholog is 100%.
Bootstrap support for H3H3N8 as seed ortholog is 74%.
Alternative seed ortholog is H3G6K0 (26 bits away from this cluster)

Group of orthologs #1883. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.ramorum:106

F6R6Q8              	100.00%		H3GI79              	100.00%
H2Y1C2              	46.61%		
H2Y260              	41.13%		
L7N0R2              	40.81%		
Q1RLF1              	40.32%		
H2XZX8              	39.35%		
F6UAX0              	37.58%		
F6W0H5              	31.29%		
H2XX05              	29.68%		
Q1RL43              	28.06%		
Q1RL67              	20.48%		
F6RSE2              	20.00%		
Q1RLE9              	15.81%		
F6TCA9              	15.32%		
H2XKK9              	14.35%		
Q1RL62              	12.74%		
F6WPJ4              	12.58%		
H2XYP9              	12.42%		
F6QEX4              	9.84%		
Q1RLE2              	6.94%		
Q4H2L1              	5.00%		
Bootstrap support for F6R6Q8 as seed ortholog is 100%.
Bootstrap support for H3GI79 as seed ortholog is 100%.

Group of orthologs #1884. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 P.ramorum:14

H2XMP0              	100.00%		H3GMA6              	100.00%
Q1RL20              	91.54%		
H2XZ50              	83.52%		
F6WI19              	82.85%		
Q1RL21              	79.96%		
Bootstrap support for H2XMP0 as seed ortholog is 88%.
Bootstrap support for H3GMA6 as seed ortholog is 79%.

Group of orthologs #1885. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.ramorum:106

F7AGK5              	100.00%		H3GBW9              	100.00%
                    	       		H3GBX0              	100.00%
Bootstrap support for F7AGK5 as seed ortholog is 100%.
Bootstrap support for H3GBW9 as seed ortholog is 100%.
Bootstrap support for H3GBX0 as seed ortholog is 100%.

Group of orthologs #1886. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.ramorum:106

H2XKS6              	100.00%		H3G9V9              	100.00%
Bootstrap support for H2XKS6 as seed ortholog is 100%.
Bootstrap support for H3G9V9 as seed ortholog is 100%.

Group of orthologs #1887. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.ramorum:10

C4B8X5              	100.00%		H3HAW8              	100.00%
Bootstrap support for C4B8X5 as seed ortholog is 100%.
Bootstrap support for H3HAW8 as seed ortholog is 60%.
Alternative seed ortholog is H3GKM5 (10 bits away from this cluster)

Group of orthologs #1888. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.ramorum:106

F6ZA91              	100.00%		H3HBH6              	100.00%
Bootstrap support for F6ZA91 as seed ortholog is 100%.
Bootstrap support for H3HBH6 as seed ortholog is 100%.

Group of orthologs #1889. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 P.ramorum:106

H2XJN2              	100.00%		H3HE46              	100.00%
Bootstrap support for H2XJN2 as seed ortholog is 87%.
Bootstrap support for H3HE46 as seed ortholog is 100%.

Group of orthologs #1890. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.ramorum:105

F6YP78              	100.00%		H3GMQ2              	100.00%
F6VYA1              	100.00%		H3GMQ3              	100.00%
F6ZSG1              	100.00%		H3GH90              	100.00%
F6ZS22              	100.00%		H3GH89              	100.00%
F6YJ55              	100.00%		H3GMY7              	100.00%
F6WN12              	74.16%		H3GMQ5              	93.06%
F7A9X4              	70.18%		H3GMQ4              	90.06%
F6YJ69              	69.90%		H3H6B3              	67.53%
H2Y1T7              	47.69%		H3H5E6              	52.56%
F6XMJ7              	44.34%		
F6WY28              	41.83%		
F6WDV1              	39.53%		
F6TBT3              	37.55%		
F6YYX0              	35.57%		
F7B629              	32.54%		
F7AGY9              	29.78%		
F6WSG2              	29.11%		
F6YJM6              	26.75%		
F6W4G0              	21.07%		
Bootstrap support for F6YP78 as seed ortholog is 100%.
Bootstrap support for F6VYA1 as seed ortholog is 100%.
Bootstrap support for F6ZSG1 as seed ortholog is 100%.
Bootstrap support for F6ZS22 as seed ortholog is 100%.
Bootstrap support for F6YJ55 as seed ortholog is 100%.
Bootstrap support for H3GMQ2 as seed ortholog is 100%.
Bootstrap support for H3GMQ3 as seed ortholog is 100%.
Bootstrap support for H3GH90 as seed ortholog is 100%.
Bootstrap support for H3GH89 as seed ortholog is 100%.
Bootstrap support for H3GMY7 as seed ortholog is 100%.

Group of orthologs #1891. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.ramorum:105

F6TN99              	100.00%		H3GHV0              	100.00%
Bootstrap support for F6TN99 as seed ortholog is 100%.
Bootstrap support for H3GHV0 as seed ortholog is 100%.

Group of orthologs #1892. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.ramorum:105

F6XWU5              	100.00%		H3H1G3              	100.00%
Bootstrap support for F6XWU5 as seed ortholog is 100%.
Bootstrap support for H3H1G3 as seed ortholog is 100%.

Group of orthologs #1893. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.ramorum:105

F6ZG04              	100.00%		H3GXK1              	100.00%
Bootstrap support for F6ZG04 as seed ortholog is 100%.
Bootstrap support for H3GXK1 as seed ortholog is 100%.

Group of orthologs #1894. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.ramorum:105

Q8T886              	100.00%		H3GCZ9              	100.00%
Bootstrap support for Q8T886 as seed ortholog is 100%.
Bootstrap support for H3GCZ9 as seed ortholog is 100%.

Group of orthologs #1895. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.ramorum:105

H2XS17              	100.00%		H3GS58              	100.00%
Bootstrap support for H2XS17 as seed ortholog is 100%.
Bootstrap support for H3GS58 as seed ortholog is 100%.

Group of orthologs #1896. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.ramorum:105

H2XQF1              	100.00%		H3HDB6              	100.00%
Bootstrap support for H2XQF1 as seed ortholog is 100%.
Bootstrap support for H3HDB6 as seed ortholog is 100%.

Group of orthologs #1897. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:104

F6US70              	100.00%		H3GDN4              	100.00%
F6QH26              	100.00%		H3GDN5              	100.00%
H2XV01              	9.69%		H3GDN3              	37.96%
Bootstrap support for F6US70 as seed ortholog is 100%.
Bootstrap support for F6QH26 as seed ortholog is 100%.
Bootstrap support for H3GDN4 as seed ortholog is 100%.
Bootstrap support for H3GDN5 as seed ortholog is 100%.

Group of orthologs #1898. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:104

F6YAZ4              	100.00%		H3G9Z2              	100.00%
                    	       		H3GA01              	94.92%
Bootstrap support for F6YAZ4 as seed ortholog is 100%.
Bootstrap support for H3G9Z2 as seed ortholog is 100%.

Group of orthologs #1899. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 P.ramorum:22

F6YFM8              	100.00%		H3GED6              	100.00%
                    	       		H3GJY4              	32.31%
Bootstrap support for F6YFM8 as seed ortholog is 67%.
Alternative seed ortholog is F6TXF8 (12 bits away from this cluster)
Bootstrap support for H3GED6 as seed ortholog is 74%.
Alternative seed ortholog is H3GHW7 (22 bits away from this cluster)

Group of orthologs #1900. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:104

F6UG66              	100.00%		H3HD62              	100.00%
                    	       		H3G5A3              	94.57%
Bootstrap support for F6UG66 as seed ortholog is 100%.
Bootstrap support for H3HD62 as seed ortholog is 100%.

Group of orthologs #1901. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 P.ramorum:104

F6THW7              	100.00%		H3GRW3              	100.00%
Bootstrap support for F6THW7 as seed ortholog is 84%.
Bootstrap support for H3GRW3 as seed ortholog is 100%.

Group of orthologs #1902. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:104

F6YVQ1              	100.00%		H3GH42              	100.00%
Bootstrap support for F6YVQ1 as seed ortholog is 100%.
Bootstrap support for H3GH42 as seed ortholog is 100%.

Group of orthologs #1903. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:104

F6ZJ39              	100.00%		H3GG13              	100.00%
Bootstrap support for F6ZJ39 as seed ortholog is 100%.
Bootstrap support for H3GG13 as seed ortholog is 100%.

Group of orthologs #1904. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:104

H2XL93              	100.00%		H3GFD9              	100.00%
Bootstrap support for H2XL93 as seed ortholog is 100%.
Bootstrap support for H3GFD9 as seed ortholog is 100%.

Group of orthologs #1905. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:104

H2XXI7              	100.00%		H3G733              	100.00%
Bootstrap support for H2XXI7 as seed ortholog is 100%.
Bootstrap support for H3G733 as seed ortholog is 100%.

Group of orthologs #1906. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:104

H2XYE0              	100.00%		H3G8R6              	100.00%
Bootstrap support for H2XYE0 as seed ortholog is 100%.
Bootstrap support for H3G8R6 as seed ortholog is 100%.

Group of orthologs #1907. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:104

F7AGV8              	100.00%		H3GZU6              	100.00%
Bootstrap support for F7AGV8 as seed ortholog is 100%.
Bootstrap support for H3GZU6 as seed ortholog is 100%.

Group of orthologs #1908. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.ramorum:104

F6YVB6              	100.00%		H3H5V2              	100.00%
Bootstrap support for F6YVB6 as seed ortholog is 100%.
Bootstrap support for H3H5V2 as seed ortholog is 100%.

Group of orthologs #1909. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.ramorum:23

H2XKS7              	100.00%		H3H2C5              	100.00%
F6VBN4              	80.10%		H3H5S8              	78.51%
F7A4D7              	32.26%		H3GU88              	57.71%
                    	       		H3H5K2              	55.89%
                    	       		H3GEQ6              	55.20%
                    	       		H3GIX1              	54.74%
                    	       		H3GEQ5              	52.69%
                    	       		H3GQ12              	47.66%
                    	       		H3GUV2              	46.97%
                    	       		H3H430              	46.86%
                    	       		H3GQ11              	46.74%
                    	       		H3H581              	46.40%
                    	       		H3H582              	46.17%
                    	       		H3H4C6              	45.60%
                    	       		H3GEH2              	45.37%
                    	       		H3H1R8              	45.37%
                    	       		H3GZ08              	44.57%
                    	       		H3GZ09              	44.46%
                    	       		H3GW96              	43.66%
                    	       		H3H5S7              	42.86%
                    	       		H3GZ11              	41.83%
                    	       		H3GZ15              	41.37%
                    	       		H3GIX4              	40.57%
                    	       		H3H033              	35.20%
                    	       		H3GZ10              	32.00%
                    	       		H3H034              	28.46%
                    	       		H3H9H4              	26.40%
                    	       		H3H577              	18.86%
                    	       		H3GY29              	10.51%
Bootstrap support for H2XKS7 as seed ortholog is 100%.
Bootstrap support for H3H2C5 as seed ortholog is 54%.
Alternative seed ortholog is H3H0U6 (23 bits away from this cluster)

Group of orthologs #1910. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.ramorum:103

F6ZYB8              	100.00%		H3GQW3              	100.00%
F6Q9D5              	24.98%		
F6RCP1              	21.81%		
Bootstrap support for F6ZYB8 as seed ortholog is 100%.
Bootstrap support for H3GQW3 as seed ortholog is 100%.

Group of orthologs #1911. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.ramorum:103

F6VSM2              	100.00%		H3G9H6              	100.00%
Bootstrap support for F6VSM2 as seed ortholog is 100%.
Bootstrap support for H3G9H6 as seed ortholog is 100%.

Group of orthologs #1912. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 P.ramorum:103

H2XPN7              	100.00%		H3G6N5              	100.00%
Bootstrap support for H2XPN7 as seed ortholog is 69%.
Alternative seed ortholog is F6T0K4 (16 bits away from this cluster)
Bootstrap support for H3G6N5 as seed ortholog is 100%.

Group of orthologs #1913. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.ramorum:103

H2Y0C3              	100.00%		H3G705              	100.00%
Bootstrap support for H2Y0C3 as seed ortholog is 100%.
Bootstrap support for H3G705 as seed ortholog is 100%.

Group of orthologs #1914. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.ramorum:103

F6SBQ3              	100.00%		H3HBW8              	100.00%
Bootstrap support for F6SBQ3 as seed ortholog is 100%.
Bootstrap support for H3HBW8 as seed ortholog is 100%.

Group of orthologs #1915. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.ramorum:103

H2XST8              	100.00%		H3HCN6              	100.00%
Bootstrap support for H2XST8 as seed ortholog is 100%.
Bootstrap support for H3HCN6 as seed ortholog is 100%.

Group of orthologs #1916. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.ramorum:102

F6R2C6              	100.00%		H3G844              	100.00%
Bootstrap support for F6R2C6 as seed ortholog is 100%.
Bootstrap support for H3G844 as seed ortholog is 100%.

Group of orthologs #1917. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.ramorum:102

F6PML6              	100.00%		H3H315              	100.00%
Bootstrap support for F6PML6 as seed ortholog is 100%.
Bootstrap support for H3H315 as seed ortholog is 100%.

Group of orthologs #1918. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 P.ramorum:58

H2XSI3              	100.00%		H3G7P4              	100.00%
Bootstrap support for H2XSI3 as seed ortholog is 55%.
Alternative seed ortholog is F6W8L4 (3 bits away from this cluster)
Bootstrap support for H3G7P4 as seed ortholog is 99%.

Group of orthologs #1919. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.ramorum:102

F6Y7W5              	100.00%		H3GUD1              	100.00%
Bootstrap support for F6Y7W5 as seed ortholog is 100%.
Bootstrap support for H3GUD1 as seed ortholog is 100%.

Group of orthologs #1920. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.ramorum:102

F6YE24              	100.00%		H3GY54              	100.00%
Bootstrap support for F6YE24 as seed ortholog is 100%.
Bootstrap support for H3GY54 as seed ortholog is 100%.

Group of orthologs #1921. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.ramorum:102

H2XLA2              	100.00%		H3GYK3              	100.00%
Bootstrap support for H2XLA2 as seed ortholog is 100%.
Bootstrap support for H3GYK3 as seed ortholog is 100%.

Group of orthologs #1922. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.ramorum:102

H2XRC8              	100.00%		H3HD72              	100.00%
Bootstrap support for H2XRC8 as seed ortholog is 100%.
Bootstrap support for H3HD72 as seed ortholog is 100%.

Group of orthologs #1923. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.ramorum:101

F6XSK1              	100.00%		H3GE21              	100.00%
F7AZ18              	9.13%		H3H7P4              	56.25%
Bootstrap support for F6XSK1 as seed ortholog is 100%.
Bootstrap support for H3GE21 as seed ortholog is 100%.

Group of orthologs #1924. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.ramorum:101

F6W2W3              	100.00%		H3GX89              	100.00%
                    	       		H3GF33              	19.27%
                    	       		H3GME2              	9.64%
Bootstrap support for F6W2W3 as seed ortholog is 100%.
Bootstrap support for H3GX89 as seed ortholog is 100%.

Group of orthologs #1925. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.ramorum:101

H2Y008              	100.00%		H3GAK9              	100.00%
Bootstrap support for H2Y008 as seed ortholog is 100%.
Bootstrap support for H3GAK9 as seed ortholog is 100%.

Group of orthologs #1926. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.ramorum:101

H2Y2U8              	100.00%		H3GCH0              	100.00%
Bootstrap support for H2Y2U8 as seed ortholog is 100%.
Bootstrap support for H3GCH0 as seed ortholog is 100%.

Group of orthologs #1927. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.ramorum:101

H2Y0B1              	100.00%		H3GM74              	100.00%
Bootstrap support for H2Y0B1 as seed ortholog is 100%.
Bootstrap support for H3GM74 as seed ortholog is 100%.

Group of orthologs #1928. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.ramorum:101

H2XPE3              	100.00%		H3H255              	100.00%
Bootstrap support for H2XPE3 as seed ortholog is 100%.
Bootstrap support for H3H255 as seed ortholog is 100%.

Group of orthologs #1929. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 P.ramorum:24

F6THA9              	100.00%		H3GKD8              	100.00%
                    	       		H3GW91              	57.50%
Bootstrap support for F6THA9 as seed ortholog is 97%.
Bootstrap support for H3GKD8 as seed ortholog is 89%.

Group of orthologs #1930. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.ramorum:100

F6ZFV5              	100.00%		H3GH39              	100.00%
                    	       		H3H988              	74.75%
Bootstrap support for F6ZFV5 as seed ortholog is 100%.
Bootstrap support for H3GH39 as seed ortholog is 100%.

Group of orthologs #1931. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.ramorum:100

F6QGB8              	100.00%		H3GGY1              	100.00%
Bootstrap support for F6QGB8 as seed ortholog is 100%.
Bootstrap support for H3GGY1 as seed ortholog is 100%.

Group of orthologs #1932. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.ramorum:100

F6SVI8              	100.00%		H3GGJ2              	100.00%
Bootstrap support for F6SVI8 as seed ortholog is 100%.
Bootstrap support for H3GGJ2 as seed ortholog is 100%.

Group of orthologs #1933. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.ramorum:100

F6SVB2              	100.00%		H3GI68              	100.00%
Bootstrap support for F6SVB2 as seed ortholog is 100%.
Bootstrap support for H3GI68 as seed ortholog is 100%.

Group of orthologs #1934. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.ramorum:100

F6RMT1              	100.00%		H3HDA4              	100.00%
Bootstrap support for F6RMT1 as seed ortholog is 100%.
Bootstrap support for H3HDA4 as seed ortholog is 100%.

Group of orthologs #1935. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.ramorum:1

Q2PEE2              	100.00%		H3G594              	100.00%
Bootstrap support for Q2PEE2 as seed ortholog is 100%.
Bootstrap support for H3G594 as seed ortholog is 46%.
Alternative seed ortholog is H3G5G2 (1 bits away from this cluster)

Group of orthologs #1936. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.ramorum:100

H2XVU3              	100.00%		H3GVB2              	100.00%
Bootstrap support for H2XVU3 as seed ortholog is 100%.
Bootstrap support for H3GVB2 as seed ortholog is 100%.

Group of orthologs #1937. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.ramorum:99

F6Y8L3              	100.00%		H3GYH6              	100.00%
F7BE27              	41.89%		H3H9Z6              	48.46%
F7B4M8              	39.19%		
F6ST69              	26.49%		
F6YI37              	24.05%		
F7BJZ5              	16.35%		
Bootstrap support for F6Y8L3 as seed ortholog is 100%.
Bootstrap support for H3GYH6 as seed ortholog is 100%.

Group of orthologs #1938. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.ramorum:99

F6PJW3              	100.00%		H3GAN0              	100.00%
Bootstrap support for F6PJW3 as seed ortholog is 96%.
Bootstrap support for H3GAN0 as seed ortholog is 100%.

Group of orthologs #1939. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.ramorum:28

F6UFA9              	100.00%		H3G6M2              	100.00%
Bootstrap support for F6UFA9 as seed ortholog is 100%.
Bootstrap support for H3G6M2 as seed ortholog is 86%.

Group of orthologs #1940. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.ramorum:25

F6R4T5              	100.00%		H3GID2              	100.00%
Bootstrap support for F6R4T5 as seed ortholog is 100%.
Bootstrap support for H3GID2 as seed ortholog is 51%.
Alternative seed ortholog is H3GBE3 (25 bits away from this cluster)

Group of orthologs #1941. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.ramorum:99

F6RRD5              	100.00%		H3GJ66              	100.00%
Bootstrap support for F6RRD5 as seed ortholog is 100%.
Bootstrap support for H3GJ66 as seed ortholog is 100%.

Group of orthologs #1942. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.ramorum:99

F6WS92              	100.00%		H3GFK0              	100.00%
Bootstrap support for F6WS92 as seed ortholog is 100%.
Bootstrap support for H3GFK0 as seed ortholog is 100%.

Group of orthologs #1943. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.ramorum:99

F6X5Q9              	100.00%		H3GG75              	100.00%
Bootstrap support for F6X5Q9 as seed ortholog is 100%.
Bootstrap support for H3GG75 as seed ortholog is 100%.

Group of orthologs #1944. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.ramorum:49

F6XRM1              	100.00%		H3GHM6              	100.00%
Bootstrap support for F6XRM1 as seed ortholog is 100%.
Bootstrap support for H3GHM6 as seed ortholog is 96%.

Group of orthologs #1945. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.ramorum:99

F6V1A9              	100.00%		H3GR70              	100.00%
Bootstrap support for F6V1A9 as seed ortholog is 100%.
Bootstrap support for H3GR70 as seed ortholog is 100%.

Group of orthologs #1946. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.ramorum:99

F6Y7F7              	100.00%		H3GVJ5              	100.00%
Bootstrap support for F6Y7F7 as seed ortholog is 100%.
Bootstrap support for H3GVJ5 as seed ortholog is 100%.

Group of orthologs #1947. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.ramorum:42

F6SXP0              	100.00%		H3H8L6              	100.00%
Bootstrap support for F6SXP0 as seed ortholog is 100%.
Bootstrap support for H3H8L6 as seed ortholog is 98%.

Group of orthologs #1948. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.ramorum:99

H2Y2A0              	100.00%		H3GHR7              	100.00%
Bootstrap support for H2Y2A0 as seed ortholog is 100%.
Bootstrap support for H3GHR7 as seed ortholog is 100%.

Group of orthologs #1949. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.ramorum:98

F6UFU8              	100.00%		H3GLA5              	100.00%
Bootstrap support for F6UFU8 as seed ortholog is 100%.
Bootstrap support for H3GLA5 as seed ortholog is 100%.

Group of orthologs #1950. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.ramorum:98

F6PHR7              	100.00%		H3HCS3              	100.00%
Bootstrap support for F6PHR7 as seed ortholog is 100%.
Bootstrap support for H3HCS3 as seed ortholog is 100%.

Group of orthologs #1951. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.ramorum:98

F7AD29              	100.00%		H3GT07              	100.00%
Bootstrap support for F7AD29 as seed ortholog is 100%.
Bootstrap support for H3GT07 as seed ortholog is 100%.

Group of orthologs #1952. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.ramorum:98

F6VR17              	100.00%		H3H6J4              	100.00%
Bootstrap support for F6VR17 as seed ortholog is 95%.
Bootstrap support for H3H6J4 as seed ortholog is 100%.

Group of orthologs #1953. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.ramorum:98

H2XZ67              	100.00%		H3GEA7              	100.00%
Bootstrap support for H2XZ67 as seed ortholog is 100%.
Bootstrap support for H3GEA7 as seed ortholog is 100%.

Group of orthologs #1954. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.ramorum:98

F6YR71              	100.00%		H3H7K8              	100.00%
Bootstrap support for F6YR71 as seed ortholog is 100%.
Bootstrap support for H3H7K8 as seed ortholog is 100%.

Group of orthologs #1955. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 P.ramorum:20

F6TKR9              	100.00%		H3H7K9              	100.00%
                    	       		H3GAV7              	65.70%
                    	       		H3GCY4              	64.08%
                    	       		H3G998              	62.94%
                    	       		H3G9A0              	62.14%
                    	       		H3GAR6              	59.87%
                    	       		H3GA14              	59.71%
                    	       		H3GAR5              	59.55%
                    	       		H3GAJ7              	58.25%
                    	       		H3GMM7              	28.80%
                    	       		H3GMM9              	27.18%
                    	       		H3HA90              	20.71%
                    	       		H3GSE2              	17.48%
                    	       		H3G6U0              	9.06%
                    	       		H3GAL4              	7.28%
                    	       		H3H1V1              	7.12%
Bootstrap support for F6TKR9 as seed ortholog is 77%.
Bootstrap support for H3H7K9 as seed ortholog is 66%.
Alternative seed ortholog is H3G929 (20 bits away from this cluster)

Group of orthologs #1956. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.ramorum:97

H2Y2C6              	100.00%		H3GWY0              	100.00%
F6W8D0              	12.90%		
Bootstrap support for H2Y2C6 as seed ortholog is 100%.
Bootstrap support for H3GWY0 as seed ortholog is 100%.

Group of orthologs #1957. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.ramorum:97

F6WFW0              	100.00%		H3GGQ0              	100.00%
Bootstrap support for F6WFW0 as seed ortholog is 100%.
Bootstrap support for H3GGQ0 as seed ortholog is 100%.

Group of orthologs #1958. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.ramorum:97

H2XL05              	100.00%		H3G7V9              	100.00%
Bootstrap support for H2XL05 as seed ortholog is 100%.
Bootstrap support for H3G7V9 as seed ortholog is 100%.

Group of orthologs #1959. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.ramorum:97

F7AB81              	100.00%		H3GDZ1              	100.00%
Bootstrap support for F7AB81 as seed ortholog is 100%.
Bootstrap support for H3GDZ1 as seed ortholog is 100%.

Group of orthologs #1960. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.ramorum:16

F6QC45              	100.00%		H3H2J6              	100.00%
Bootstrap support for F6QC45 as seed ortholog is 100%.
Bootstrap support for H3H2J6 as seed ortholog is 80%.

Group of orthologs #1961. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.ramorum:97

H2XYU8              	100.00%		H3GWK0              	100.00%
Bootstrap support for H2XYU8 as seed ortholog is 100%.
Bootstrap support for H3GWK0 as seed ortholog is 100%.

Group of orthologs #1962. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.ramorum:97

H2XVJ7              	100.00%		H3H4G5              	100.00%
Bootstrap support for H2XVJ7 as seed ortholog is 100%.
Bootstrap support for H3H4G5 as seed ortholog is 100%.

Group of orthologs #1963. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.ramorum:97

H2XYD5              	100.00%		H3HB50              	100.00%
Bootstrap support for H2XYD5 as seed ortholog is 100%.
Bootstrap support for H3HB50 as seed ortholog is 100%.

Group of orthologs #1964. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.ramorum:96

F7B9W5              	100.00%		H3GIH7              	100.00%
                    	       		H3GWK1              	60.89%
Bootstrap support for F7B9W5 as seed ortholog is 100%.
Bootstrap support for H3GIH7 as seed ortholog is 100%.

Group of orthologs #1965. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.ramorum:96

F6WQ64              	100.00%		H3G7M2              	100.00%
Bootstrap support for F6WQ64 as seed ortholog is 100%.
Bootstrap support for H3G7M2 as seed ortholog is 100%.

Group of orthologs #1966. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.ramorum:96

F6T283              	100.00%		H3GQ84              	100.00%
Bootstrap support for F6T283 as seed ortholog is 100%.
Bootstrap support for H3GQ84 as seed ortholog is 100%.

Group of orthologs #1967. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.ramorum:96

F7AG76              	100.00%		H3G8J4              	100.00%
Bootstrap support for F7AG76 as seed ortholog is 100%.
Bootstrap support for H3G8J4 as seed ortholog is 100%.

Group of orthologs #1968. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.ramorum:96

F6ZTE1              	100.00%		H3GIW4              	100.00%
Bootstrap support for F6ZTE1 as seed ortholog is 100%.
Bootstrap support for H3GIW4 as seed ortholog is 100%.

Group of orthologs #1969. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.ramorum:96

H2XT68              	100.00%		H3GBM5              	100.00%
Bootstrap support for H2XT68 as seed ortholog is 100%.
Bootstrap support for H3GBM5 as seed ortholog is 100%.

Group of orthologs #1970. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.ramorum:96

F6PPH5              	100.00%		H3HD16              	100.00%
Bootstrap support for F6PPH5 as seed ortholog is 96%.
Bootstrap support for H3HD16 as seed ortholog is 100%.

Group of orthologs #1971. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.ramorum:96

F6UK15              	100.00%		H3HBA1              	100.00%
Bootstrap support for F6UK15 as seed ortholog is 100%.
Bootstrap support for H3HBA1 as seed ortholog is 100%.

Group of orthologs #1972. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 P.ramorum:12

H2XT36              	100.00%		H3GVQ3              	100.00%
Bootstrap support for H2XT36 as seed ortholog is 96%.
Bootstrap support for H3GVQ3 as seed ortholog is 76%.

Group of orthologs #1973. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.ramorum:96

H2Y306              	100.00%		H3GMW3              	100.00%
Bootstrap support for H2Y306 as seed ortholog is 100%.
Bootstrap support for H3GMW3 as seed ortholog is 100%.

Group of orthologs #1974. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.ramorum:96

F7B169              	100.00%		H3HC10              	100.00%
Bootstrap support for F7B169 as seed ortholog is 100%.
Bootstrap support for H3HC10 as seed ortholog is 100%.

Group of orthologs #1975. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 P.ramorum:95

F6W4G9              	100.00%		H3G796              	100.00%
Bootstrap support for F6W4G9 as seed ortholog is 53%.
Alternative seed ortholog is F6XMT9 (4 bits away from this cluster)
Bootstrap support for H3G796 as seed ortholog is 100%.

Group of orthologs #1976. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 P.ramorum:95

H2Y0D5              	100.00%		H3GBB8              	100.00%
Bootstrap support for H2Y0D5 as seed ortholog is 100%.
Bootstrap support for H3GBB8 as seed ortholog is 100%.

Group of orthologs #1977. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:32

F6X7P9              	100.00%		H3GTG7              	100.00%
                    	       		H3H454              	100.00%
                    	       		H3GEX6              	65.17%
                    	       		H3GF22              	61.00%
                    	       		H3H628              	52.73%
                    	       		H3H558              	35.87%
                    	       		H3H636              	30.80%
                    	       		H3H7T8              	30.62%
                    	       		H3H785              	17.87%
                    	       		H3GV95              	16.05%
                    	       		H3H8B3              	14.83%
                    	       		H3H5X0              	13.56%
                    	       		H3GLY7              	11.12%
                    	       		H3GLY6              	11.06%
                    	       		H3H417              	10.64%
                    	       		H3GE02              	6.14%
                    	       		H3H7R6              	5.84%
                    	       		H3H5R1              	5.59%
Bootstrap support for F6X7P9 as seed ortholog is 100%.
Bootstrap support for H3GTG7 as seed ortholog is 72%.
Alternative seed ortholog is H3GV94 (32 bits away from this cluster)
Bootstrap support for H3H454 as seed ortholog is 71%.
Alternative seed ortholog is H3GV94 (32 bits away from this cluster)

Group of orthologs #1978. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:9

H2XXH0              	100.00%		H3H6P2              	100.00%
                    	       		H3GYR9              	95.42%
                    	       		H3H5X8              	80.73%
                    	       		H3H9W8              	66.51%
                    	       		H3H769              	62.40%
                    	       		H3H6C2              	57.82%
                    	       		H3H9W6              	46.13%
                    	       		H3H979              	39.97%
                    	       		H3H4E7              	36.33%
                    	       		H3H405              	34.91%
                    	       		H3H7F8              	32.07%
                    	       		H3GAI1              	31.44%
                    	       		H3GB10              	30.96%
                    	       		H3H2I6              	21.01%
Bootstrap support for H2XXH0 as seed ortholog is 100%.
Bootstrap support for H3H6P2 as seed ortholog is 61%.
Alternative seed ortholog is H3GHX4 (9 bits away from this cluster)

Group of orthologs #1979. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:94

F6VTD9              	100.00%		H3GNJ7              	100.00%
F6SF06              	37.82%		H3GNJ6              	64.48%
F6YQB8              	13.62%		H3H858              	33.12%
                    	       		H3GQA5              	25.44%
Bootstrap support for F6VTD9 as seed ortholog is 100%.
Bootstrap support for H3GNJ7 as seed ortholog is 100%.

Group of orthologs #1980. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:94

F6VAX6              	100.00%		H3GLG2              	100.00%
F6Y437              	8.12%		
Bootstrap support for F6VAX6 as seed ortholog is 100%.
Bootstrap support for H3GLG2 as seed ortholog is 100%.

Group of orthologs #1981. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:94

F6QU62              	100.00%		H3GJT9              	100.00%
Bootstrap support for F6QU62 as seed ortholog is 100%.
Bootstrap support for H3GJT9 as seed ortholog is 100%.

Group of orthologs #1982. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:94

F6QFA2              	100.00%		H3GU61              	100.00%
Bootstrap support for F6QFA2 as seed ortholog is 100%.
Bootstrap support for H3GU61 as seed ortholog is 100%.

Group of orthologs #1983. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:94

H2XP72              	100.00%		H3GQF7              	100.00%
Bootstrap support for H2XP72 as seed ortholog is 100%.
Bootstrap support for H3GQF7 as seed ortholog is 100%.

Group of orthologs #1984. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:94

H2Y2S5              	100.00%		H3GCZ1              	100.00%
Bootstrap support for H2Y2S5 as seed ortholog is 100%.
Bootstrap support for H3GCZ1 as seed ortholog is 100%.

Group of orthologs #1985. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.ramorum:94

H2XV35              	100.00%		H3GLB8              	100.00%
Bootstrap support for H2XV35 as seed ortholog is 100%.
Bootstrap support for H3GLB8 as seed ortholog is 100%.

Group of orthologs #1986. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.ramorum:93

H2XN98              	100.00%		H3H5D5              	100.00%
                    	       		H3GYK7              	99.65%
                    	       		H3H8H7              	65.91%
Bootstrap support for H2XN98 as seed ortholog is 100%.
Bootstrap support for H3H5D5 as seed ortholog is 100%.

Group of orthologs #1987. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.ramorum:93

F6SN27              	100.00%		H3G9Y7              	100.00%
                    	       		H3H0E5              	12.87%
Bootstrap support for F6SN27 as seed ortholog is 100%.
Bootstrap support for H3G9Y7 as seed ortholog is 100%.

Group of orthologs #1988. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.ramorum:37

F6X863              	100.00%		H3GP91              	100.00%
Bootstrap support for F6X863 as seed ortholog is 100%.
Bootstrap support for H3GP91 as seed ortholog is 86%.

Group of orthologs #1989. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.ramorum:93

F6QLU5              	100.00%		H3HBI0              	100.00%
Bootstrap support for F6QLU5 as seed ortholog is 100%.
Bootstrap support for H3HBI0 as seed ortholog is 100%.

Group of orthologs #1990. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.ramorum:93

H2XYR7              	100.00%		H3GGZ6              	100.00%
Bootstrap support for H2XYR7 as seed ortholog is 100%.
Bootstrap support for H3GGZ6 as seed ortholog is 100%.

Group of orthologs #1991. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.ramorum:93

F6XIK1              	100.00%		H3HE29              	100.00%
Bootstrap support for F6XIK1 as seed ortholog is 100%.
Bootstrap support for H3HE29 as seed ortholog is 100%.

Group of orthologs #1992. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.ramorum:26

H2XX49              	100.00%		H3GUR5              	100.00%
Bootstrap support for H2XX49 as seed ortholog is 84%.
Bootstrap support for H3GUR5 as seed ortholog is 73%.
Alternative seed ortholog is H3HB49 (26 bits away from this cluster)

Group of orthologs #1993. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.ramorum:93

H2XT92              	100.00%		H3H1I1              	100.00%
Bootstrap support for H2XT92 as seed ortholog is 100%.
Bootstrap support for H3H1I1 as seed ortholog is 100%.

Group of orthologs #1994. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.ramorum:92

F6U5W6              	100.00%		H3HD05              	100.00%
                    	       		H3G9R7              	31.21%
Bootstrap support for F6U5W6 as seed ortholog is 100%.
Bootstrap support for H3HD05 as seed ortholog is 100%.

Group of orthologs #1995. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.ramorum:92

H2XRY8              	100.00%		H3HA43              	100.00%
                    	       		H3HEF4              	100.00%
Bootstrap support for H2XRY8 as seed ortholog is 100%.
Bootstrap support for H3HA43 as seed ortholog is 100%.
Bootstrap support for H3HEF4 as seed ortholog is 100%.

Group of orthologs #1996. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.ramorum:92

F6Q7X0              	100.00%		H3GGZ8              	100.00%
Bootstrap support for F6Q7X0 as seed ortholog is 100%.
Bootstrap support for H3GGZ8 as seed ortholog is 100%.

Group of orthologs #1997. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.ramorum:92

F6SST4              	100.00%		H3GPH7              	100.00%
Bootstrap support for F6SST4 as seed ortholog is 100%.
Bootstrap support for H3GPH7 as seed ortholog is 100%.

Group of orthologs #1998. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.ramorum:92

F6VTY2              	100.00%		H3GSG3              	100.00%
Bootstrap support for F6VTY2 as seed ortholog is 100%.
Bootstrap support for H3GSG3 as seed ortholog is 100%.

Group of orthologs #1999. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.ramorum:92

H2XME2              	100.00%		H3GCE9              	100.00%
Bootstrap support for H2XME2 as seed ortholog is 100%.
Bootstrap support for H3GCE9 as seed ortholog is 100%.

Group of orthologs #2000. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.ramorum:92

H2XTZ8              	100.00%		H3G7G6              	100.00%
Bootstrap support for H2XTZ8 as seed ortholog is 100%.
Bootstrap support for H3G7G6 as seed ortholog is 100%.

Group of orthologs #2001. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.ramorum:92

F6THY1              	100.00%		H3H450              	100.00%
Bootstrap support for F6THY1 as seed ortholog is 100%.
Bootstrap support for H3H450 as seed ortholog is 100%.

Group of orthologs #2002. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.ramorum:92

F6V3K9              	100.00%		H3H2G3              	100.00%
Bootstrap support for F6V3K9 as seed ortholog is 100%.
Bootstrap support for H3H2G3 as seed ortholog is 100%.

Group of orthologs #2003. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.ramorum:92

F6RIG9              	100.00%		H3HBD4              	100.00%
Bootstrap support for F6RIG9 as seed ortholog is 100%.
Bootstrap support for H3HBD4 as seed ortholog is 100%.

Group of orthologs #2004. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.ramorum:92

H2XSK2              	100.00%		H3H0V1              	100.00%
Bootstrap support for H2XSK2 as seed ortholog is 100%.
Bootstrap support for H3H0V1 as seed ortholog is 100%.

Group of orthologs #2005. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:91

F6WJ76              	100.00%		H3GDC5              	100.00%
                    	       		H3GDC1              	29.65%
                    	       		H3GDC4              	23.59%
                    	       		H3GDC3              	23.38%
                    	       		H3GDC2              	21.86%
                    	       		H3GDC8              	18.83%
                    	       		H3GDC6              	18.40%
                    	       		H3GD98              	17.75%
                    	       		H3GD97              	17.10%
                    	       		H3H2S6              	16.88%
                    	       		H3GF14              	14.50%
                    	       		H3GD91              	11.47%
                    	       		H3H2S4              	11.47%
                    	       		H3H2S3              	11.47%
                    	       		H3HE97              	10.17%
                    	       		H3GG92              	9.52%
                    	       		H3H8B5              	9.52%
                    	       		H3GD99              	9.09%
                    	       		H3GDA0              	8.66%
                    	       		H3GD92              	8.44%
                    	       		H3GD96              	8.44%
                    	       		H3GZH8              	7.79%
                    	       		H3GF13              	7.79%
                    	       		H3GF15              	6.93%
                    	       		H3GGQ5              	6.93%
                    	       		H3GEX1              	6.49%
                    	       		H3GEX0              	6.49%
Bootstrap support for F6WJ76 as seed ortholog is 100%.
Bootstrap support for H3GDC5 as seed ortholog is 100%.

Group of orthologs #2006. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:91

F6Y4L7              	100.00%		H3G9H4              	100.00%
                    	       		H3G8R1              	52.16%
Bootstrap support for F6Y4L7 as seed ortholog is 100%.
Bootstrap support for H3G9H4 as seed ortholog is 100%.

Group of orthologs #2007. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:91

F6WHB0              	100.00%		H3H419              	100.00%
H2Y3K2              	5.62%		
Bootstrap support for F6WHB0 as seed ortholog is 100%.
Bootstrap support for H3H419 as seed ortholog is 100%.

Group of orthologs #2008. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:91

F6U6T9              	100.00%		H3G672              	100.00%
Bootstrap support for F6U6T9 as seed ortholog is 100%.
Bootstrap support for H3G672 as seed ortholog is 100%.

Group of orthologs #2009. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:91

F6V9L7              	100.00%		H3GI69              	100.00%
Bootstrap support for F6V9L7 as seed ortholog is 100%.
Bootstrap support for H3GI69 as seed ortholog is 100%.

Group of orthologs #2010. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:91

H2XJN8              	100.00%		H3G7A3              	100.00%
Bootstrap support for H2XJN8 as seed ortholog is 100%.
Bootstrap support for H3G7A3 as seed ortholog is 100%.

Group of orthologs #2011. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:91

F6SVM4              	100.00%		H3GXI5              	100.00%
Bootstrap support for F6SVM4 as seed ortholog is 100%.
Bootstrap support for H3GXI5 as seed ortholog is 100%.

Group of orthologs #2012. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:91

F6ZS04              	100.00%		H3GIM7              	100.00%
Bootstrap support for F6ZS04 as seed ortholog is 100%.
Bootstrap support for H3GIM7 as seed ortholog is 100%.

Group of orthologs #2013. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:91

H2XP91              	100.00%		H3GE79              	100.00%
Bootstrap support for H2XP91 as seed ortholog is 100%.
Bootstrap support for H3GE79 as seed ortholog is 100%.

Group of orthologs #2014. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:91

F6W248              	100.00%		H3GZL3              	100.00%
Bootstrap support for F6W248 as seed ortholog is 100%.
Bootstrap support for H3GZL3 as seed ortholog is 100%.

Group of orthologs #2015. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:91

H2XP71              	100.00%		H3GKB6              	100.00%
Bootstrap support for H2XP71 as seed ortholog is 100%.
Bootstrap support for H3GKB6 as seed ortholog is 100%.

Group of orthologs #2016. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:91

F6YH93              	100.00%		H3H2K5              	100.00%
Bootstrap support for F6YH93 as seed ortholog is 100%.
Bootstrap support for H3H2K5 as seed ortholog is 100%.

Group of orthologs #2017. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.ramorum:91

H2XVM5              	100.00%		H3HAQ1              	100.00%
Bootstrap support for H2XVM5 as seed ortholog is 100%.
Bootstrap support for H3HAQ1 as seed ortholog is 100%.

Group of orthologs #2018. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.ramorum:90

H2XR06              	100.00%		H3H035              	100.00%
                    	       		H3GDK2              	10.18%
                    	       		H3GSP3              	9.47%
Bootstrap support for H2XR06 as seed ortholog is 100%.
Bootstrap support for H3H035 as seed ortholog is 100%.

Group of orthologs #2019. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.ramorum:90

F6ZY44              	100.00%		H3G5M1              	100.00%
Bootstrap support for F6ZY44 as seed ortholog is 100%.
Bootstrap support for H3G5M1 as seed ortholog is 100%.

Group of orthologs #2020. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.ramorum:90

F7B7K2              	100.00%		H3G707              	100.00%
Bootstrap support for F7B7K2 as seed ortholog is 100%.
Bootstrap support for H3G707 as seed ortholog is 100%.

Group of orthologs #2021. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.ramorum:90

H2Y1B5              	100.00%		H3G589              	100.00%
Bootstrap support for H2Y1B5 as seed ortholog is 100%.
Bootstrap support for H3G589 as seed ortholog is 100%.

Group of orthologs #2022. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.ramorum:89

F6WG20              	100.00%		H3H5E4              	100.00%
                    	       		H3GF51              	39.02%
                    	       		H3H5E3              	33.95%
                    	       		H3H5E2              	7.77%
Bootstrap support for F6WG20 as seed ortholog is 95%.
Bootstrap support for H3H5E4 as seed ortholog is 100%.

Group of orthologs #2023. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 P.ramorum:89

F6SYT5              	100.00%		H3GZ85              	100.00%
                    	       		H3GZ87              	89.30%
                    	       		H3H1F7              	17.49%
Bootstrap support for F6SYT5 as seed ortholog is 59%.
Alternative seed ortholog is F6RJ04 (3 bits away from this cluster)
Bootstrap support for H3GZ85 as seed ortholog is 100%.

Group of orthologs #2024. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.ramorum:89

F6QYL2              	100.00%		H3GUM5              	100.00%
                    	       		H3GUM6              	34.87%
Bootstrap support for F6QYL2 as seed ortholog is 100%.
Bootstrap support for H3GUM5 as seed ortholog is 100%.

Group of orthologs #2025. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.ramorum:89

H2XV16              	100.00%		H3HB83              	100.00%
H2XMF7              	14.13%		
Bootstrap support for H2XV16 as seed ortholog is 100%.
Bootstrap support for H3HB83 as seed ortholog is 100%.

Group of orthologs #2026. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.ramorum:89

F6WTN6              	100.00%		H3G8M5              	100.00%
Bootstrap support for F6WTN6 as seed ortholog is 100%.
Bootstrap support for H3G8M5 as seed ortholog is 100%.

Group of orthologs #2027. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.ramorum:89

F6YMZ5              	100.00%		H3G5A1              	100.00%
Bootstrap support for F6YMZ5 as seed ortholog is 100%.
Bootstrap support for H3G5A1 as seed ortholog is 100%.

Group of orthologs #2028. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.ramorum:89

F6PYR8              	100.00%		H3GY74              	100.00%
Bootstrap support for F6PYR8 as seed ortholog is 100%.
Bootstrap support for H3GY74 as seed ortholog is 100%.

Group of orthologs #2029. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.ramorum:89

F7B349              	100.00%		H3GCC1              	100.00%
Bootstrap support for F7B349 as seed ortholog is 100%.
Bootstrap support for H3GCC1 as seed ortholog is 100%.

Group of orthologs #2030. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.ramorum:89

H2XUI3              	100.00%		H3GH20              	100.00%
Bootstrap support for H2XUI3 as seed ortholog is 100%.
Bootstrap support for H3GH20 as seed ortholog is 100%.

Group of orthologs #2031. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.ramorum:89

H2XWF9              	100.00%		H3GNP4              	100.00%
Bootstrap support for H2XWF9 as seed ortholog is 100%.
Bootstrap support for H3GNP4 as seed ortholog is 100%.

Group of orthologs #2032. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.ramorum:89

Q5VJS0              	100.00%		H3HBS8              	100.00%
Bootstrap support for Q5VJS0 as seed ortholog is 100%.
Bootstrap support for H3HBS8 as seed ortholog is 100%.

Group of orthologs #2033. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.ramorum:88

F6U6F4              	100.00%		H3GQT0              	100.00%
                    	       		H3GQT2              	72.28%
                    	       		H3GQS9              	69.31%
                    	       		H3GQT1              	58.20%
                    	       		H3GKJ6              	29.52%
Bootstrap support for F6U6F4 as seed ortholog is 100%.
Bootstrap support for H3GQT0 as seed ortholog is 100%.

Group of orthologs #2034. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.ramorum:21

F6TPM4              	100.00%		H3HC78              	100.00%
Bootstrap support for F6TPM4 as seed ortholog is 100%.
Bootstrap support for H3HC78 as seed ortholog is 74%.
Alternative seed ortholog is H3GS64 (21 bits away from this cluster)

Group of orthologs #2035. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.ramorum:30

H2Y2X6              	100.00%		H3GIW5              	100.00%
Bootstrap support for H2Y2X6 as seed ortholog is 100%.
Bootstrap support for H3GIW5 as seed ortholog is 89%.

Group of orthologs #2036. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.ramorum:87

F6YI50              	100.00%		H3GJQ9              	100.00%
                    	       		H3GJR0              	30.73%
                    	       		H3GY12              	21.09%
                    	       		H3GJR2              	17.19%
                    	       		H3GDB1              	15.89%
                    	       		H3GJF5              	14.84%
                    	       		H3GJW3              	11.20%
Bootstrap support for F6YI50 as seed ortholog is 100%.
Bootstrap support for H3GJQ9 as seed ortholog is 100%.

Group of orthologs #2037. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.ramorum:87

H2XZ40              	100.00%		H3H4J2              	100.00%
F6ULU6              	64.24%		H3GVV3              	11.88%
F7AP79              	34.48%		H3GVV0              	9.11%
                    	       		H3GVV1              	8.32%
                    	       		H3GX00              	6.34%
Bootstrap support for H2XZ40 as seed ortholog is 100%.
Bootstrap support for H3H4J2 as seed ortholog is 100%.

Group of orthologs #2038. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.ramorum:87

F6UKG9              	100.00%		H3GH35              	100.00%
                    	       		H3H5H0              	100.00%
Bootstrap support for F6UKG9 as seed ortholog is 100%.
Bootstrap support for H3GH35 as seed ortholog is 100%.
Bootstrap support for H3H5H0 as seed ortholog is 100%.

Group of orthologs #2039. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 P.ramorum:87

F6TVM0              	100.00%		H3G511              	100.00%
Bootstrap support for F6TVM0 as seed ortholog is 89%.
Bootstrap support for H3G511 as seed ortholog is 100%.

Group of orthologs #2040. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.ramorum:87

F6UU76              	100.00%		H3G8X3              	100.00%
Bootstrap support for F6UU76 as seed ortholog is 100%.
Bootstrap support for H3G8X3 as seed ortholog is 100%.

Group of orthologs #2041. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.ramorum:87

F6QB35              	100.00%		H3HAR3              	100.00%
Bootstrap support for F6QB35 as seed ortholog is 100%.
Bootstrap support for H3HAR3 as seed ortholog is 100%.

Group of orthologs #2042. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.ramorum:87

F6W6K9              	100.00%		H3GYE1              	100.00%
Bootstrap support for F6W6K9 as seed ortholog is 100%.
Bootstrap support for H3GYE1 as seed ortholog is 100%.

Group of orthologs #2043. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.ramorum:87

H2XTS0              	100.00%		H3HAY7              	100.00%
Bootstrap support for H2XTS0 as seed ortholog is 100%.
Bootstrap support for H3HAY7 as seed ortholog is 100%.

Group of orthologs #2044. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.ramorum:86

F7BJ17              	100.00%		H3H434              	100.00%
                    	       		H3H056              	99.61%
Bootstrap support for F7BJ17 as seed ortholog is 100%.
Bootstrap support for H3H434 as seed ortholog is 100%.

Group of orthologs #2045. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.ramorum:86

F6R1F8              	100.00%		H3GPB7              	100.00%
Bootstrap support for F6R1F8 as seed ortholog is 100%.
Bootstrap support for H3GPB7 as seed ortholog is 100%.

Group of orthologs #2046. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.ramorum:30

F6WY47              	100.00%		H3GGV1              	100.00%
Bootstrap support for F6WY47 as seed ortholog is 100%.
Bootstrap support for H3GGV1 as seed ortholog is 66%.
Alternative seed ortholog is H3GCK6 (30 bits away from this cluster)

Group of orthologs #2047. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.ramorum:86

F6WRB6              	100.00%		H3GI97              	100.00%
Bootstrap support for F6WRB6 as seed ortholog is 100%.
Bootstrap support for H3GI97 as seed ortholog is 100%.

Group of orthologs #2048. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.ramorum:86

F6U8W0              	100.00%		H3H1C1              	100.00%
Bootstrap support for F6U8W0 as seed ortholog is 100%.
Bootstrap support for H3H1C1 as seed ortholog is 100%.

Group of orthologs #2049. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 P.ramorum:32

F6TLU2              	100.00%		H3GP18              	100.00%
F6TZG1              	37.17%		
H2XSF5              	21.31%		
H2XRT9              	6.54%		
F6UAS2              	6.34%		
F6S8N9              	5.05%		
Bootstrap support for F6TLU2 as seed ortholog is 72%.
Alternative seed ortholog is F6V779 (2 bits away from this cluster)
Bootstrap support for H3GP18 as seed ortholog is 71%.
Alternative seed ortholog is H3GXF0 (32 bits away from this cluster)

Group of orthologs #2050. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.ramorum:85

H2XYL2              	100.00%		H3H0G3              	100.00%
F6U3R5              	25.41%		H3H428              	92.48%
                    	       		H3H426              	70.80%
                    	       		H3H0G4              	42.92%
                    	       		H3H0G6              	29.87%
Bootstrap support for H2XYL2 as seed ortholog is 100%.
Bootstrap support for H3H0G3 as seed ortholog is 100%.

Group of orthologs #2051. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.ramorum:17

F6UEA0              	100.00%		H3G6J3              	100.00%
F6YZ62              	47.73%		H3GAZ4              	74.76%
F6Z103              	41.14%		H3H7L0              	74.45%
Bootstrap support for F6UEA0 as seed ortholog is 100%.
Bootstrap support for H3G6J3 as seed ortholog is 62%.
Alternative seed ortholog is H3G6J1 (17 bits away from this cluster)

Group of orthologs #2052. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.ramorum:85

H2XVF4              	100.00%		H3H5I1              	100.00%
F6YTT5              	14.64%		H3GZI5              	97.89%
                    	       		H3G9S0              	12.44%
Bootstrap support for H2XVF4 as seed ortholog is 100%.
Bootstrap support for H3H5I1 as seed ortholog is 100%.

Group of orthologs #2053. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.ramorum:16

F6Y3T4              	100.00%		H3H1E8              	100.00%
F6Y3U3              	31.17%		H3GBT3              	53.41%
Bootstrap support for F6Y3T4 as seed ortholog is 100%.
Bootstrap support for H3H1E8 as seed ortholog is 82%.

Group of orthologs #2054. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 P.ramorum:85

H2XMR6              	100.00%		H3GVD0              	100.00%
                    	       		H3HCU8              	27.98%
Bootstrap support for H2XMR6 as seed ortholog is 62%.
Alternative seed ortholog is F6TMZ9 (4 bits away from this cluster)
Bootstrap support for H3GVD0 as seed ortholog is 100%.

Group of orthologs #2055. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.ramorum:85

F6QBK7              	100.00%		H3GBR8              	100.00%
Bootstrap support for F6QBK7 as seed ortholog is 100%.
Bootstrap support for H3GBR8 as seed ortholog is 100%.

Group of orthologs #2056. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.ramorum:18

H2XPT9              	100.00%		H3G8Z7              	100.00%
Bootstrap support for H2XPT9 as seed ortholog is 100%.
Bootstrap support for H3G8Z7 as seed ortholog is 78%.

Group of orthologs #2057. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.ramorum:85

F7ATJ8              	100.00%		H3GW56              	100.00%
Bootstrap support for F7ATJ8 as seed ortholog is 100%.
Bootstrap support for H3GW56 as seed ortholog is 100%.

Group of orthologs #2058. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.ramorum:85

H2XWJ8              	100.00%		H3HBE8              	100.00%
Bootstrap support for H2XWJ8 as seed ortholog is 100%.
Bootstrap support for H3HBE8 as seed ortholog is 100%.

Group of orthologs #2059. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.ramorum:84

F6WZ37              	100.00%		H3G5I2              	100.00%
Bootstrap support for F6WZ37 as seed ortholog is 100%.
Bootstrap support for H3G5I2 as seed ortholog is 100%.

Group of orthologs #2060. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 P.ramorum:84

F6XFV9              	100.00%		H3G6X5              	100.00%
Bootstrap support for F6XFV9 as seed ortholog is 73%.
Alternative seed ortholog is F6UQQ5 (21 bits away from this cluster)
Bootstrap support for H3G6X5 as seed ortholog is 100%.

Group of orthologs #2061. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.ramorum:84

F6VPT6              	100.00%		H3GL78              	100.00%
Bootstrap support for F6VPT6 as seed ortholog is 100%.
Bootstrap support for H3GL78 as seed ortholog is 100%.

Group of orthologs #2062. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.ramorum:84

H2XXY6              	100.00%		H3GI65              	100.00%
Bootstrap support for H2XXY6 as seed ortholog is 100%.
Bootstrap support for H3GI65 as seed ortholog is 100%.

Group of orthologs #2063. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.ramorum:84

F7B1C7              	100.00%		H3HC60              	100.00%
Bootstrap support for F7B1C7 as seed ortholog is 88%.
Bootstrap support for H3HC60 as seed ortholog is 100%.

Group of orthologs #2064. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.ramorum:83

F6XMX2              	100.00%		H3GED1              	100.00%
Bootstrap support for F6XMX2 as seed ortholog is 100%.
Bootstrap support for H3GED1 as seed ortholog is 100%.

Group of orthologs #2065. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.ramorum:83

F6XIG6              	100.00%		H3GHD4              	100.00%
Bootstrap support for F6XIG6 as seed ortholog is 100%.
Bootstrap support for H3GHD4 as seed ortholog is 100%.

Group of orthologs #2066. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.ramorum:83

F6RW32              	100.00%		H3HBV4              	100.00%
Bootstrap support for F6RW32 as seed ortholog is 100%.
Bootstrap support for H3HBV4 as seed ortholog is 100%.

Group of orthologs #2067. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.ramorum:83

H2XV90              	100.00%		H3GYP6              	100.00%
Bootstrap support for H2XV90 as seed ortholog is 100%.
Bootstrap support for H3GYP6 as seed ortholog is 100%.

Group of orthologs #2068. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.ramorum:82

H2XNY7              	100.00%		H3GMK6              	100.00%
                    	       		H3GML3              	52.83%
                    	       		H3HC80              	52.26%
                    	       		H3GUG0              	51.24%
                    	       		H3GMK5              	51.02%
                    	       		H3H4Y7              	51.02%
                    	       		H3GDE9              	50.57%
                    	       		H3GUF9              	50.45%
                    	       		H3HC77              	47.85%
Bootstrap support for H2XNY7 as seed ortholog is 100%.
Bootstrap support for H3GMK6 as seed ortholog is 100%.

Group of orthologs #2069. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.ramorum:82

F6YW93              	100.00%		H3GMI1              	100.00%
F6TNT4              	5.12%		
Bootstrap support for F6YW93 as seed ortholog is 100%.
Bootstrap support for H3GMI1 as seed ortholog is 100%.

Group of orthologs #2070. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.ramorum:82

F6TX13              	100.00%		H3GDB3              	100.00%
Bootstrap support for F6TX13 as seed ortholog is 100%.
Bootstrap support for H3GDB3 as seed ortholog is 100%.

Group of orthologs #2071. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.ramorum:82

F6Y6K2              	100.00%		H3GD83              	100.00%
Bootstrap support for F6Y6K2 as seed ortholog is 100%.
Bootstrap support for H3GD83 as seed ortholog is 100%.

Group of orthologs #2072. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.ramorum:82

F6SAX1              	100.00%		H3GRS3              	100.00%
Bootstrap support for F6SAX1 as seed ortholog is 100%.
Bootstrap support for H3GRS3 as seed ortholog is 100%.

Group of orthologs #2073. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.ramorum:82

F6WIJ0              	100.00%		H3GIY3              	100.00%
Bootstrap support for F6WIJ0 as seed ortholog is 100%.
Bootstrap support for H3GIY3 as seed ortholog is 100%.

Group of orthologs #2074. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.ramorum:26

F6RZD9              	100.00%		H3GUF5              	100.00%
Bootstrap support for F6RZD9 as seed ortholog is 100%.
Bootstrap support for H3GUF5 as seed ortholog is 71%.
Alternative seed ortholog is H3GL47 (26 bits away from this cluster)

Group of orthologs #2075. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.ramorum:82

H2XNI6              	100.00%		H3GCJ4              	100.00%
Bootstrap support for H2XNI6 as seed ortholog is 100%.
Bootstrap support for H3GCJ4 as seed ortholog is 100%.

Group of orthologs #2076. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.ramorum:82

H2XQY4              	100.00%		H3GH00              	100.00%
Bootstrap support for H2XQY4 as seed ortholog is 100%.
Bootstrap support for H3GH00 as seed ortholog is 100%.

Group of orthologs #2077. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.ramorum:82

H2XUK0              	100.00%		H3GDW8              	100.00%
Bootstrap support for H2XUK0 as seed ortholog is 100%.
Bootstrap support for H3GDW8 as seed ortholog is 100%.

Group of orthologs #2078. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.ramorum:82

F6ZJ92              	100.00%		H3GV49              	100.00%
Bootstrap support for F6ZJ92 as seed ortholog is 100%.
Bootstrap support for H3GV49 as seed ortholog is 100%.

Group of orthologs #2079. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.ramorum:82

F7B819              	100.00%		H3GTM2              	100.00%
Bootstrap support for F7B819 as seed ortholog is 100%.
Bootstrap support for H3GTM2 as seed ortholog is 100%.

Group of orthologs #2080. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.ramorum:82

H2XZ76              	100.00%		H3GD70              	100.00%
Bootstrap support for H2XZ76 as seed ortholog is 100%.
Bootstrap support for H3GD70 as seed ortholog is 100%.

Group of orthologs #2081. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:81

F6Y1X1              	100.00%		H3G8S9              	100.00%
                    	       		H3GHW9              	48.29%
Bootstrap support for F6Y1X1 as seed ortholog is 100%.
Bootstrap support for H3G8S9 as seed ortholog is 100%.

Group of orthologs #2082. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:81

F6TR45              	100.00%		H3GM83              	100.00%
                    	       		H3GM81              	34.91%
Bootstrap support for F6TR45 as seed ortholog is 100%.
Bootstrap support for H3GM83 as seed ortholog is 100%.

Group of orthologs #2083. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:81

F6TXQ6              	100.00%		H3GLX3              	100.00%
F6V198              	35.23%		
Bootstrap support for F6TXQ6 as seed ortholog is 100%.
Bootstrap support for H3GLX3 as seed ortholog is 100%.

Group of orthologs #2084. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 P.ramorum:26

F6QQM7              	100.00%		H3H0X8              	100.00%
F6XH20              	41.81%		
Bootstrap support for F6QQM7 as seed ortholog is 76%.
Bootstrap support for H3H0X8 as seed ortholog is 79%.

Group of orthologs #2085. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:81

H2Y2F7              	100.00%		H3GR15              	100.00%
                    	       		H3GR16              	54.58%
Bootstrap support for H2Y2F7 as seed ortholog is 100%.
Bootstrap support for H3GR15 as seed ortholog is 100%.

Group of orthologs #2086. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:81

F6R725              	100.00%		H3GHB9              	100.00%
Bootstrap support for F6R725 as seed ortholog is 100%.
Bootstrap support for H3GHB9 as seed ortholog is 100%.

Group of orthologs #2087. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:81

F6SZ23              	100.00%		H3GHI8              	100.00%
Bootstrap support for F6SZ23 as seed ortholog is 100%.
Bootstrap support for H3GHI8 as seed ortholog is 100%.

Group of orthologs #2088. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:81

F6WS42              	100.00%		H3GEE8              	100.00%
Bootstrap support for F6WS42 as seed ortholog is 100%.
Bootstrap support for H3GEE8 as seed ortholog is 100%.

Group of orthologs #2089. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:81

F6XVG4              	100.00%		H3GGY8              	100.00%
Bootstrap support for F6XVG4 as seed ortholog is 100%.
Bootstrap support for H3GGY8 as seed ortholog is 100%.

Group of orthologs #2090. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:81

H2XKV0              	100.00%		H3G6B5              	100.00%
Bootstrap support for H2XKV0 as seed ortholog is 100%.
Bootstrap support for H3G6B5 as seed ortholog is 100%.

Group of orthologs #2091. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:81

H2XP61              	100.00%		H3GLC6              	100.00%
Bootstrap support for H2XP61 as seed ortholog is 100%.
Bootstrap support for H3GLC6 as seed ortholog is 100%.

Group of orthologs #2092. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:81

F6UAY5              	100.00%		H3HB31              	100.00%
Bootstrap support for F6UAY5 as seed ortholog is 100%.
Bootstrap support for H3HB31 as seed ortholog is 100%.

Group of orthologs #2093. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:81

F6YWI2              	100.00%		H3H1I5              	100.00%
Bootstrap support for F6YWI2 as seed ortholog is 100%.
Bootstrap support for H3H1I5 as seed ortholog is 100%.

Group of orthologs #2094. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.ramorum:81

H2XT65              	100.00%		H3GWN3              	100.00%
Bootstrap support for H2XT65 as seed ortholog is 100%.
Bootstrap support for H3GWN3 as seed ortholog is 100%.

Group of orthologs #2095. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 P.ramorum:6

H2XTP1              	100.00%		H3H701              	100.00%
F6RIZ5              	6.51%		
F6V7C2              	5.79%		
Bootstrap support for H2XTP1 as seed ortholog is 57%.
Alternative seed ortholog is F6S4S1 (6 bits away from this cluster)
Bootstrap support for H3H701 as seed ortholog is 54%.
Alternative seed ortholog is H3G8L5 (6 bits away from this cluster)

Group of orthologs #2096. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 P.ramorum:80

F6U8E4              	100.00%		H3GEB2              	100.00%
Bootstrap support for F6U8E4 as seed ortholog is 100%.
Bootstrap support for H3GEB2 as seed ortholog is 100%.

Group of orthologs #2097. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 P.ramorum:80

F6X6G2              	100.00%		H3HBV9              	100.00%
Bootstrap support for F6X6G2 as seed ortholog is 100%.
Bootstrap support for H3HBV9 as seed ortholog is 100%.

Group of orthologs #2098. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.ramorum:79

H2XX57              	100.00%		H3GRX1              	100.00%
H2XM03              	21.72%		H3H5M4              	44.77%
H2XZ20              	18.70%		H3GZT0              	44.65%
                    	       		H3GDX8              	19.35%
                    	       		H3H7V2              	13.94%
                    	       		H3GKY8              	9.81%
                    	       		H3GWZ2              	8.77%
Bootstrap support for H2XX57 as seed ortholog is 100%.
Bootstrap support for H3GRX1 as seed ortholog is 100%.

Group of orthologs #2099. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.ramorum:79

F6PWR0              	100.00%		H3G7M4              	100.00%
Bootstrap support for F6PWR0 as seed ortholog is 100%.
Bootstrap support for H3G7M4 as seed ortholog is 100%.

Group of orthologs #2100. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.ramorum:79

F6PMB4              	100.00%		H3GVK1              	100.00%
Bootstrap support for F6PMB4 as seed ortholog is 100%.
Bootstrap support for H3GVK1 as seed ortholog is 100%.

Group of orthologs #2101. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.ramorum:79

F6SEF1              	100.00%		H3GT06              	100.00%
Bootstrap support for F6SEF1 as seed ortholog is 100%.
Bootstrap support for H3GT06 as seed ortholog is 100%.

Group of orthologs #2102. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.ramorum:79

F6Z6N2              	100.00%		H3GIM4              	100.00%
Bootstrap support for F6Z6N2 as seed ortholog is 100%.
Bootstrap support for H3GIM4 as seed ortholog is 100%.

Group of orthologs #2103. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.ramorum:79

F7BEK1              	100.00%		H3GIC8              	100.00%
Bootstrap support for F7BEK1 as seed ortholog is 100%.
Bootstrap support for H3GIC8 as seed ortholog is 100%.

Group of orthologs #2104. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.ramorum:79

F7BQA9              	100.00%		H3GLW8              	100.00%
Bootstrap support for F7BQA9 as seed ortholog is 100%.
Bootstrap support for H3GLW8 as seed ortholog is 100%.

Group of orthologs #2105. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.ramorum:79

F6ZIQ8              	100.00%		H3GTT9              	100.00%
Bootstrap support for F6ZIQ8 as seed ortholog is 100%.
Bootstrap support for H3GTT9 as seed ortholog is 100%.

Group of orthologs #2106. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.ramorum:79

Q4H2Q4              	100.00%		H3GID9              	100.00%
Bootstrap support for Q4H2Q4 as seed ortholog is 100%.
Bootstrap support for H3GID9 as seed ortholog is 100%.

Group of orthologs #2107. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.ramorum:78

F6XZR7              	100.00%		H3HDM4              	100.00%
Bootstrap support for F6XZR7 as seed ortholog is 100%.
Bootstrap support for H3HDM4 as seed ortholog is 100%.

Group of orthologs #2108. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.ramorum:78

Q1RLC9              	100.00%		H3GZT7              	100.00%
Bootstrap support for Q1RLC9 as seed ortholog is 100%.
Bootstrap support for H3GZT7 as seed ortholog is 100%.

Group of orthologs #2109. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.ramorum:78

H2XRT6              	100.00%		H3HCC9              	100.00%
Bootstrap support for H2XRT6 as seed ortholog is 100%.
Bootstrap support for H3HCC9 as seed ortholog is 100%.

Group of orthologs #2110. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.ramorum:77

F6V3M5              	100.00%		H3GJI1              	100.00%
F6V318              	7.92%		
Bootstrap support for F6V3M5 as seed ortholog is 100%.
Bootstrap support for H3GJI1 as seed ortholog is 100%.

Group of orthologs #2111. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.ramorum:77

F6PWH7              	100.00%		H3GPN9              	100.00%
Bootstrap support for F6PWH7 as seed ortholog is 100%.
Bootstrap support for H3GPN9 as seed ortholog is 100%.

Group of orthologs #2112. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.ramorum:77

F7AUH4              	100.00%		H3G9B7              	100.00%
Bootstrap support for F7AUH4 as seed ortholog is 100%.
Bootstrap support for H3G9B7 as seed ortholog is 100%.

Group of orthologs #2113. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.ramorum:77

F6QM17              	100.00%		H3GXT1              	100.00%
Bootstrap support for F6QM17 as seed ortholog is 100%.
Bootstrap support for H3GXT1 as seed ortholog is 100%.

Group of orthologs #2114. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.ramorum:77

F7A6C5              	100.00%		H3GRY4              	100.00%
Bootstrap support for F7A6C5 as seed ortholog is 100%.
Bootstrap support for H3GRY4 as seed ortholog is 100%.

Group of orthologs #2115. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 P.ramorum:77

H2Y1S7              	100.00%		H3G8D9              	100.00%
Bootstrap support for H2Y1S7 as seed ortholog is 79%.
Bootstrap support for H3G8D9 as seed ortholog is 100%.

Group of orthologs #2116. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.ramorum:77

H2XMJ7              	100.00%		H3H1H7              	100.00%
Bootstrap support for H2XMJ7 as seed ortholog is 100%.
Bootstrap support for H3H1H7 as seed ortholog is 100%.

Group of orthologs #2117. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.ramorum:13

H2XSB5              	100.00%		H3H4J5              	100.00%
Bootstrap support for H2XSB5 as seed ortholog is 100%.
Bootstrap support for H3H4J5 as seed ortholog is 70%.
Alternative seed ortholog is H3H3B2 (13 bits away from this cluster)

Group of orthologs #2118. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.ramorum:8

H2XL48              	100.00%		H3HCB9              	100.00%
Bootstrap support for H2XL48 as seed ortholog is 100%.
Bootstrap support for H3HCB9 as seed ortholog is 66%.
Alternative seed ortholog is H3GJ74 (8 bits away from this cluster)

Group of orthologs #2119. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.ramorum:76

H2XRK4              	100.00%		H3GV37              	100.00%
H2XKL8              	23.92%		H3GES9              	19.27%
F6T636              	22.75%		H3GKT3              	16.65%
H2XMD1              	18.04%		H3H0W8              	5.24%
H2XTT4              	13.86%		
Bootstrap support for H2XRK4 as seed ortholog is 100%.
Bootstrap support for H3GV37 as seed ortholog is 100%.

Group of orthologs #2120. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.ramorum:76

F6XPI8              	100.00%		H3G6H5              	100.00%
                    	       		H3G6L7              	100.00%
Bootstrap support for F6XPI8 as seed ortholog is 100%.
Bootstrap support for H3G6H5 as seed ortholog is 100%.
Bootstrap support for H3G6L7 as seed ortholog is 100%.

Group of orthologs #2121. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.ramorum:76

F6WEC1              	100.00%		H3GKG7              	100.00%
                    	       		H3GFU4              	27.87%
Bootstrap support for F6WEC1 as seed ortholog is 100%.
Bootstrap support for H3GKG7 as seed ortholog is 100%.

Group of orthologs #2122. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.ramorum:76

F6SLJ7              	100.00%		H3GIA2              	100.00%
Bootstrap support for F6SLJ7 as seed ortholog is 100%.
Bootstrap support for H3GIA2 as seed ortholog is 100%.

Group of orthologs #2123. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.ramorum:76

H2XJI0              	100.00%		H3G7L8              	100.00%
Bootstrap support for H2XJI0 as seed ortholog is 100%.
Bootstrap support for H3G7L8 as seed ortholog is 100%.

Group of orthologs #2124. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.ramorum:76

F6VV86              	100.00%		H3GTW7              	100.00%
Bootstrap support for F6VV86 as seed ortholog is 100%.
Bootstrap support for H3GTW7 as seed ortholog is 100%.

Group of orthologs #2125. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 P.ramorum:76

H2XY24              	100.00%		H3GFH3              	100.00%
Bootstrap support for H2XY24 as seed ortholog is 67%.
Alternative seed ortholog is H2Y3A1 (9 bits away from this cluster)
Bootstrap support for H3GFH3 as seed ortholog is 100%.

Group of orthologs #2126. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.ramorum:76

F7AM61              	100.00%		H3H2G6              	100.00%
Bootstrap support for F7AM61 as seed ortholog is 100%.
Bootstrap support for H3H2G6 as seed ortholog is 100%.

Group of orthologs #2127. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.ramorum:76

H2XT29              	100.00%		H3GV47              	100.00%
Bootstrap support for H2XT29 as seed ortholog is 100%.
Bootstrap support for H3GV47 as seed ortholog is 100%.

Group of orthologs #2128. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.ramorum:76

H2XRC6              	100.00%		H3H2I1              	100.00%
Bootstrap support for H2XRC6 as seed ortholog is 100%.
Bootstrap support for H3H2I1 as seed ortholog is 100%.

Group of orthologs #2129. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.ramorum:76

Q4H3T3              	100.00%		H3GT93              	100.00%
Bootstrap support for Q4H3T3 as seed ortholog is 100%.
Bootstrap support for H3GT93 as seed ortholog is 100%.

Group of orthologs #2130. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.ramorum:75

F6TJR3              	100.00%		H3GLF4              	100.00%
F7AV79              	35.73%		H3GLF5              	83.06%
F6V6C3              	19.03%		
Bootstrap support for F6TJR3 as seed ortholog is 100%.
Bootstrap support for H3GLF4 as seed ortholog is 100%.

Group of orthologs #2131. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.ramorum:18

F6W0T2              	100.00%		H3GNA2              	100.00%
Bootstrap support for F6W0T2 as seed ortholog is 100%.
Bootstrap support for H3GNA2 as seed ortholog is 85%.

Group of orthologs #2132. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.ramorum:75

F6TIH6              	100.00%		H3HAS7              	100.00%
Bootstrap support for F6TIH6 as seed ortholog is 100%.
Bootstrap support for H3HAS7 as seed ortholog is 100%.

Group of orthologs #2133. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.ramorum:75

F6VWZ6              	100.00%		H3HCQ9              	100.00%
Bootstrap support for F6VWZ6 as seed ortholog is 100%.
Bootstrap support for H3HCQ9 as seed ortholog is 100%.

Group of orthologs #2134. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.ramorum:75

F6Z7A9              	100.00%		H3HB80              	100.00%
Bootstrap support for F6Z7A9 as seed ortholog is 100%.
Bootstrap support for H3HB80 as seed ortholog is 100%.

Group of orthologs #2135. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.ramorum:75

F7ALA2              	100.00%		H3HAU0              	100.00%
Bootstrap support for F7ALA2 as seed ortholog is 100%.
Bootstrap support for H3HAU0 as seed ortholog is 100%.

Group of orthologs #2136. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.ramorum:75

H2XXK6              	100.00%		H3HB95              	100.00%
Bootstrap support for H2XXK6 as seed ortholog is 100%.
Bootstrap support for H3HB95 as seed ortholog is 100%.

Group of orthologs #2137. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:74

F6YV26              	100.00%		H3H520              	100.00%
F6WMW7              	20.15%		
H2XN59              	18.63%		
F6RQ77              	18.25%		
F6XQY6              	17.11%		
H2XY63              	17.11%		
H2XVQ5              	16.73%		
F6UDE2              	16.54%		
F7BB18              	16.35%		
H2XZA1              	16.35%		
F6W5Z3              	15.40%		
F6Q7J8              	15.02%		
H2XM68              	15.02%		
H2Y0V5              	14.64%		
F6T435              	14.45%		
H2XVV6              	14.26%		
F6TC09              	14.26%		
F6U9D6              	14.07%		
F6W505              	14.07%		
F6ZT75              	13.31%		
F6QWZ9              	13.31%		
F6RPT1              	13.31%		
F6UH52              	13.31%		
F6SB61              	13.12%		
F6QWY0              	13.12%		
F7A8W7              	12.93%		
H2Y248              	12.74%		
H2XV74              	12.74%		
F6T2T0              	12.74%		
F6Q1R5              	12.55%		
Q86NA9              	12.17%		
H2Y011              	11.98%		
F6TN66              	11.60%		
H2XRW3              	11.60%		
F6XEI7              	11.22%		
Q6A1F0              	10.46%		
H2XK77              	9.51%		
Bootstrap support for F6YV26 as seed ortholog is 100%.
Bootstrap support for H3H520 as seed ortholog is 100%.

Group of orthologs #2138. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:74

F6YXQ0              	100.00%		H3H1L1              	100.00%
H2XXT0              	15.60%		
Bootstrap support for F6YXQ0 as seed ortholog is 100%.
Bootstrap support for H3H1L1 as seed ortholog is 100%.

Group of orthologs #2139. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:74

F6VMI7              	100.00%		H3GD27              	100.00%
Bootstrap support for F6VMI7 as seed ortholog is 100%.
Bootstrap support for H3GD27 as seed ortholog is 100%.

Group of orthologs #2140. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:74

F6PU76              	100.00%		H3GTE9              	100.00%
Bootstrap support for F6PU76 as seed ortholog is 100%.
Bootstrap support for H3GTE9 as seed ortholog is 100%.

Group of orthologs #2141. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 P.ramorum:74

F6VPV7              	100.00%		H3GJV5              	100.00%
Bootstrap support for F6VPV7 as seed ortholog is 85%.
Bootstrap support for H3GJV5 as seed ortholog is 100%.

Group of orthologs #2142. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:74

F6W881              	100.00%		H3GIT3              	100.00%
Bootstrap support for F6W881 as seed ortholog is 100%.
Bootstrap support for H3GIT3 as seed ortholog is 100%.

Group of orthologs #2143. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:74

F6VIC3              	100.00%		H3GM18              	100.00%
Bootstrap support for F6VIC3 as seed ortholog is 100%.
Bootstrap support for H3GM18 as seed ortholog is 100%.

Group of orthologs #2144. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 P.ramorum:74

F6YSI2              	100.00%		H3GMX0              	100.00%
Bootstrap support for F6YSI2 as seed ortholog is 89%.
Bootstrap support for H3GMX0 as seed ortholog is 100%.

Group of orthologs #2145. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:74

H2XN89              	100.00%		H3GE49              	100.00%
Bootstrap support for H2XN89 as seed ortholog is 100%.
Bootstrap support for H3GE49 as seed ortholog is 100%.

Group of orthologs #2146. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:74

H2XR90              	100.00%		H3GBG7              	100.00%
Bootstrap support for H2XR90 as seed ortholog is 100%.
Bootstrap support for H3GBG7 as seed ortholog is 100%.

Group of orthologs #2147. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:74

F7AE79              	100.00%		H3GNU9              	100.00%
Bootstrap support for F7AE79 as seed ortholog is 100%.
Bootstrap support for H3GNU9 as seed ortholog is 100%.

Group of orthologs #2148. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 P.ramorum:74

F6W4Z8              	100.00%		H3HEC7              	100.00%
Bootstrap support for F6W4Z8 as seed ortholog is 87%.
Bootstrap support for H3HEC7 as seed ortholog is 100%.

Group of orthologs #2149. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:74

F7BFG7              	100.00%		H3H3B8              	100.00%
Bootstrap support for F7BFG7 as seed ortholog is 100%.
Bootstrap support for H3H3B8 as seed ortholog is 100%.

Group of orthologs #2150. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:74

H2Y379              	100.00%		H3GRD9              	100.00%
Bootstrap support for H2Y379 as seed ortholog is 100%.
Bootstrap support for H3GRD9 as seed ortholog is 100%.

Group of orthologs #2151. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:74

F7AJC9              	100.00%		H3HE71              	100.00%
Bootstrap support for F7AJC9 as seed ortholog is 100%.
Bootstrap support for H3HE71 as seed ortholog is 100%.

Group of orthologs #2152. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.ramorum:74

H2XVX4              	100.00%		H3H103              	100.00%
Bootstrap support for H2XVX4 as seed ortholog is 100%.
Bootstrap support for H3H103 as seed ortholog is 100%.

Group of orthologs #2153. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 P.ramorum:73

F6TVN3              	100.00%		H3GB26              	100.00%
                    	       		H3G6G2              	94.89%
Bootstrap support for F6TVN3 as seed ortholog is 72%.
Alternative seed ortholog is F6RY16 (20 bits away from this cluster)
Bootstrap support for H3GB26 as seed ortholog is 100%.

Group of orthologs #2154. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.ramorum:73

F6WJ25              	100.00%		H3H4T8              	100.00%
                    	       		H3GAY5              	88.66%
Bootstrap support for F6WJ25 as seed ortholog is 100%.
Bootstrap support for H3H4T8 as seed ortholog is 100%.

Group of orthologs #2155. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 P.ramorum:73

F6W7C2              	100.00%		H3GFP1              	100.00%
Bootstrap support for F6W7C2 as seed ortholog is 66%.
Alternative seed ortholog is F6VZ08 (22 bits away from this cluster)
Bootstrap support for H3GFP1 as seed ortholog is 100%.

Group of orthologs #2156. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.ramorum:73

F6UJ07              	100.00%		H3GRG2              	100.00%
Bootstrap support for F6UJ07 as seed ortholog is 100%.
Bootstrap support for H3GRG2 as seed ortholog is 100%.

Group of orthologs #2157. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.ramorum:73

H2XLX4              	100.00%		H3H1C3              	100.00%
Bootstrap support for H2XLX4 as seed ortholog is 100%.
Bootstrap support for H3H1C3 as seed ortholog is 100%.

Group of orthologs #2158. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:72

F7AXY8              	100.00%		H3GSY3              	100.00%
                    	       		H3HCB8              	77.96%
                    	       		H3G9Q5              	52.25%
                    	       		H3GB18              	51.25%
                    	       		H3GSY9              	51.09%
                    	       		H3G9Q3              	49.92%
                    	       		H3GB24              	49.58%
                    	       		H3G9Q4              	49.42%
                    	       		H3H9X5              	48.91%
                    	       		H3G742              	48.25%
                    	       		H3G9Q6              	46.74%
                    	       		H3H741              	44.24%
                    	       		H3GSY4              	36.56%
                    	       		H3GSY8              	33.39%
Bootstrap support for F7AXY8 as seed ortholog is 100%.
Bootstrap support for H3GSY3 as seed ortholog is 100%.

Group of orthologs #2159. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 P.ramorum:72

H2XZV3              	100.00%		H3GAM1              	100.00%
H2XL18              	11.49%		H3H1Y5              	96.09%
H2XRA9              	5.11%		H3GB37              	94.78%
                    	       		H3H0D0              	70.87%
                    	       		H3H0D4              	40.00%
                    	       		H3H0C9              	20.43%
                    	       		H3GB54              	17.83%
Bootstrap support for H2XZV3 as seed ortholog is 59%.
Alternative seed ortholog is F6PV82 (6 bits away from this cluster)
Bootstrap support for H3GAM1 as seed ortholog is 100%.

Group of orthologs #2160. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 P.ramorum:72

Q86SD3              	100.00%		H3GZS2              	100.00%
F6Z465              	6.74%		
F6QHS0              	6.32%		
Bootstrap support for Q86SD3 as seed ortholog is 61%.
Alternative seed ortholog is H2XZE5 (18 bits away from this cluster)
Bootstrap support for H3GZS2 as seed ortholog is 100%.

Group of orthologs #2161. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:1

F6SN53              	100.00%		H3H395              	100.00%
                    	       		H3GVE4              	5.75%
Bootstrap support for F6SN53 as seed ortholog is 100%.
Bootstrap support for H3H395 as seed ortholog is 50%.
Alternative seed ortholog is H3GFL0 (1 bits away from this cluster)

Group of orthologs #2162. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:72

F6QMN2              	100.00%		H3H7A7              	100.00%
                    	       		H3H7A8              	47.84%
Bootstrap support for F6QMN2 as seed ortholog is 100%.
Bootstrap support for H3H7A7 as seed ortholog is 100%.

Group of orthologs #2163. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:72

F6WT81              	100.00%		H3GC30              	100.00%
Bootstrap support for F6WT81 as seed ortholog is 100%.
Bootstrap support for H3GC30 as seed ortholog is 100%.

Group of orthologs #2164. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:72

F6UPQ6              	100.00%		H3GWV0              	100.00%
Bootstrap support for F6UPQ6 as seed ortholog is 100%.
Bootstrap support for H3GWV0 as seed ortholog is 100%.

Group of orthologs #2165. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:2

F6XHB2              	100.00%		H3GVP7              	100.00%
Bootstrap support for F6XHB2 as seed ortholog is 100%.
Bootstrap support for H3GVP7 as seed ortholog is 54%.
Alternative seed ortholog is H3GNR9 (2 bits away from this cluster)

Group of orthologs #2166. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:72

F6ZBT0              	100.00%		H3H1F6              	100.00%
Bootstrap support for F6ZBT0 as seed ortholog is 100%.
Bootstrap support for H3H1F6 as seed ortholog is 100%.

Group of orthologs #2167. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:72

H2Y104              	100.00%		H3GKG2              	100.00%
Bootstrap support for H2Y104 as seed ortholog is 100%.
Bootstrap support for H3GKG2 as seed ortholog is 100%.

Group of orthologs #2168. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:72

H2XVT6              	100.00%		H3GYH4              	100.00%
Bootstrap support for H2XVT6 as seed ortholog is 100%.
Bootstrap support for H3GYH4 as seed ortholog is 100%.

Group of orthologs #2169. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:72

F7B503              	100.00%		H3HBZ3              	100.00%
Bootstrap support for F7B503 as seed ortholog is 100%.
Bootstrap support for H3HBZ3 as seed ortholog is 100%.

Group of orthologs #2170. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:72

H2Y058              	100.00%		H3H421              	100.00%
Bootstrap support for H2Y058 as seed ortholog is 100%.
Bootstrap support for H3H421 as seed ortholog is 100%.

Group of orthologs #2171. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.ramorum:72

H2Y2B5              	100.00%		H3HCR7              	100.00%
Bootstrap support for H2Y2B5 as seed ortholog is 100%.
Bootstrap support for H3HCR7 as seed ortholog is 100%.

Group of orthologs #2172. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.ramorum:71

F6WBN2              	100.00%		H3H5V4              	100.00%
H2Y003              	70.90%		H3H9X2              	100.00%
                    	       		H3GU87              	46.62%
                    	       		H3HEG5              	42.12%
Bootstrap support for F6WBN2 as seed ortholog is 100%.
Bootstrap support for H3H5V4 as seed ortholog is 100%.
Bootstrap support for H3H9X2 as seed ortholog is 100%.

Group of orthologs #2173. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.ramorum:71

H2Y2I0              	100.00%		H3HA28              	100.00%
                    	       		H3H6A1              	94.76%
                    	       		H3HA75              	83.00%
                    	       		H3H9E8              	65.28%
Bootstrap support for H2Y2I0 as seed ortholog is 100%.
Bootstrap support for H3HA28 as seed ortholog is 100%.

Group of orthologs #2174. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.ramorum:71

F6RPC5              	100.00%		H3GCJ0              	100.00%
Bootstrap support for F6RPC5 as seed ortholog is 100%.
Bootstrap support for H3GCJ0 as seed ortholog is 100%.

Group of orthologs #2175. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.ramorum:71

F6Q3M5              	100.00%		H3GRM5              	100.00%
Bootstrap support for F6Q3M5 as seed ortholog is 100%.
Bootstrap support for H3GRM5 as seed ortholog is 100%.

Group of orthologs #2176. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 P.ramorum:71

H2XJX4              	100.00%		H3GGX7              	100.00%
Bootstrap support for H2XJX4 as seed ortholog is 77%.
Bootstrap support for H3GGX7 as seed ortholog is 100%.

Group of orthologs #2177. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.ramorum:71

F7AAH4              	100.00%		H3GYT9              	100.00%
Bootstrap support for F7AAH4 as seed ortholog is 100%.
Bootstrap support for H3GYT9 as seed ortholog is 100%.

Group of orthologs #2178. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.ramorum:70

F6Q3E6              	100.00%		H3GFC9              	100.00%
Bootstrap support for F6Q3E6 as seed ortholog is 100%.
Bootstrap support for H3GFC9 as seed ortholog is 100%.

Group of orthologs #2179. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.ramorum:70

F6WAE5              	100.00%		H3GUY3              	100.00%
Bootstrap support for F6WAE5 as seed ortholog is 100%.
Bootstrap support for H3GUY3 as seed ortholog is 100%.

Group of orthologs #2180. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 P.ramorum:70

H2XWV5              	100.00%		H3G587              	100.00%
Bootstrap support for H2XWV5 as seed ortholog is 90%.
Bootstrap support for H3G587 as seed ortholog is 100%.

Group of orthologs #2181. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.ramorum:70

H2XN19              	100.00%		H3H109              	100.00%
Bootstrap support for H2XN19 as seed ortholog is 100%.
Bootstrap support for H3H109 as seed ortholog is 100%.

Group of orthologs #2182. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.ramorum:69

Q256Z9              	100.00%		H3GLU6              	100.00%
                    	       		H3H086              	26.23%
                    	       		H3H7K3              	17.63%
Bootstrap support for Q256Z9 as seed ortholog is 100%.
Bootstrap support for H3GLU6 as seed ortholog is 100%.

Group of orthologs #2183. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.ramorum:69

F6QVI1              	100.00%		H3GCK4              	100.00%
Bootstrap support for F6QVI1 as seed ortholog is 100%.
Bootstrap support for H3GCK4 as seed ortholog is 100%.

Group of orthologs #2184. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.ramorum:69

F6QIW3              	100.00%		H3GUX3              	100.00%
Bootstrap support for F6QIW3 as seed ortholog is 100%.
Bootstrap support for H3GUX3 as seed ortholog is 100%.

Group of orthologs #2185. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.ramorum:69

H2XSS0              	100.00%		H3G9M1              	100.00%
Bootstrap support for H2XSS0 as seed ortholog is 100%.
Bootstrap support for H3G9M1 as seed ortholog is 100%.

Group of orthologs #2186. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.ramorum:69

F7B5G8              	100.00%		H3GMA3              	100.00%
Bootstrap support for F7B5G8 as seed ortholog is 100%.
Bootstrap support for H3GMA3 as seed ortholog is 100%.

Group of orthologs #2187. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.ramorum:69

F7BGS1              	100.00%		H3HAR8              	100.00%
Bootstrap support for F7BGS1 as seed ortholog is 100%.
Bootstrap support for H3HAR8 as seed ortholog is 100%.

Group of orthologs #2188. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.ramorum:68

F6X139              	100.00%		H3G9T4              	100.00%
F6X7G6              	28.16%		H3GE88              	30.72%
Bootstrap support for F6X139 as seed ortholog is 100%.
Bootstrap support for H3G9T4 as seed ortholog is 100%.

Group of orthologs #2189. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.ramorum:68

F6YS62              	100.00%		H3GE90              	100.00%
Bootstrap support for F6YS62 as seed ortholog is 100%.
Bootstrap support for H3GE90 as seed ortholog is 100%.

Group of orthologs #2190. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.ramorum:68

F6PWX0              	100.00%		H3H1H4              	100.00%
Bootstrap support for F6PWX0 as seed ortholog is 100%.
Bootstrap support for H3H1H4 as seed ortholog is 100%.

Group of orthologs #2191. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.ramorum:68

F6U8D6              	100.00%		H3H5Y6              	100.00%
Bootstrap support for F6U8D6 as seed ortholog is 100%.
Bootstrap support for H3H5Y6 as seed ortholog is 100%.

Group of orthologs #2192. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.ramorum:67

F6PRB6              	100.00%		H3GPG1              	100.00%
                    	       		H3HA65              	100.00%
Bootstrap support for F6PRB6 as seed ortholog is 100%.
Bootstrap support for H3GPG1 as seed ortholog is 100%.
Bootstrap support for H3HA65 as seed ortholog is 100%.

Group of orthologs #2193. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.ramorum:67

H2XRD8              	100.00%		H3GM60              	100.00%
                    	       		H3H010              	29.37%
Bootstrap support for H2XRD8 as seed ortholog is 100%.
Bootstrap support for H3GM60 as seed ortholog is 100%.

Group of orthologs #2194. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.ramorum:67

F6SD13              	100.00%		H3G4Y3              	100.00%
Bootstrap support for F6SD13 as seed ortholog is 100%.
Bootstrap support for H3G4Y3 as seed ortholog is 100%.

Group of orthologs #2195. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.ramorum:67

F6WCS0              	100.00%		H3GHN0              	100.00%
Bootstrap support for F6WCS0 as seed ortholog is 100%.
Bootstrap support for H3GHN0 as seed ortholog is 100%.

Group of orthologs #2196. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.ramorum:67

H2XJN3              	100.00%		H3G547              	100.00%
Bootstrap support for H2XJN3 as seed ortholog is 100%.
Bootstrap support for H3G547 as seed ortholog is 100%.

Group of orthologs #2197. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.ramorum:67

H2Y135              	100.00%		H3GXE3              	100.00%
Bootstrap support for H2Y135 as seed ortholog is 100%.
Bootstrap support for H3GXE3 as seed ortholog is 100%.

Group of orthologs #2198. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.ramorum:66

H2XVE9              	100.00%		H3GSR3              	100.00%
F7AN97              	6.28%		
Bootstrap support for H2XVE9 as seed ortholog is 100%.
Bootstrap support for H3GSR3 as seed ortholog is 100%.

Group of orthologs #2199. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 P.ramorum:66

F6QPK2              	100.00%		H3G5R4              	100.00%
Bootstrap support for F6QPK2 as seed ortholog is 77%.
Bootstrap support for H3G5R4 as seed ortholog is 100%.

Group of orthologs #2200. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.ramorum:66

F6TJY9              	100.00%		H3G538              	100.00%
Bootstrap support for F6TJY9 as seed ortholog is 100%.
Bootstrap support for H3G538 as seed ortholog is 100%.

Group of orthologs #2201. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 P.ramorum:66

F6WAM1              	100.00%		H3GVS9              	100.00%
Bootstrap support for F6WAM1 as seed ortholog is 68%.
Alternative seed ortholog is H2XPJ2 (15 bits away from this cluster)
Bootstrap support for H3GVS9 as seed ortholog is 100%.

Group of orthologs #2202. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.ramorum:66

F6RXR0              	100.00%		H3H8V6              	100.00%
Bootstrap support for F6RXR0 as seed ortholog is 100%.
Bootstrap support for H3H8V6 as seed ortholog is 100%.

Group of orthologs #2203. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.ramorum:66

F6YK36              	100.00%		H3GUC2              	100.00%
Bootstrap support for F6YK36 as seed ortholog is 100%.
Bootstrap support for H3GUC2 as seed ortholog is 100%.

Group of orthologs #2204. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.ramorum:66

H2XZI3              	100.00%		H3G7D7              	100.00%
Bootstrap support for H2XZI3 as seed ortholog is 100%.
Bootstrap support for H3G7D7 as seed ortholog is 100%.

Group of orthologs #2205. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 P.ramorum:66

F6WQG9              	100.00%		H3HBB8              	100.00%
Bootstrap support for F6WQG9 as seed ortholog is 59%.
Alternative seed ortholog is F6S0N6 (7 bits away from this cluster)
Bootstrap support for H3HBB8 as seed ortholog is 100%.

Group of orthologs #2206. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.ramorum:66

H2XY39              	100.00%		H3H4Q6              	100.00%
Bootstrap support for H2XY39 as seed ortholog is 100%.
Bootstrap support for H3H4Q6 as seed ortholog is 100%.

Group of orthologs #2207. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.ramorum:65

F6V0W8              	100.00%		H3GXU8              	100.00%
F6Z1D9              	20.25%		
Bootstrap support for F6V0W8 as seed ortholog is 100%.
Bootstrap support for H3GXU8 as seed ortholog is 100%.

Group of orthologs #2208. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.ramorum:65

F6UPP6              	100.00%		H3GLH8              	100.00%
Bootstrap support for F6UPP6 as seed ortholog is 100%.
Bootstrap support for H3GLH8 as seed ortholog is 100%.

Group of orthologs #2209. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.ramorum:65

F6T052              	100.00%		H3GT42              	100.00%
Bootstrap support for F6T052 as seed ortholog is 100%.
Bootstrap support for H3GT42 as seed ortholog is 100%.

Group of orthologs #2210. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 P.ramorum:65

F6S2Y7              	100.00%		H3HDS1              	100.00%
Bootstrap support for F6S2Y7 as seed ortholog is 72%.
Alternative seed ortholog is H2XSG2 (14 bits away from this cluster)
Bootstrap support for H3HDS1 as seed ortholog is 100%.

Group of orthologs #2211. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.ramorum:65

H2XQR9              	100.00%		H3H2K3              	100.00%
Bootstrap support for H2XQR9 as seed ortholog is 100%.
Bootstrap support for H3H2K3 as seed ortholog is 100%.

Group of orthologs #2212. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.ramorum:64

F6T4U7              	100.00%		H3G8H6              	100.00%
F6ZUV3              	34.53%		H3GH71              	100.00%
Bootstrap support for F6T4U7 as seed ortholog is 100%.
Bootstrap support for H3G8H6 as seed ortholog is 100%.
Bootstrap support for H3GH71 as seed ortholog is 100%.

Group of orthologs #2213. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.ramorum:64

F6Z6E4              	100.00%		H3GCF5              	100.00%
Bootstrap support for F6Z6E4 as seed ortholog is 100%.
Bootstrap support for H3GCF5 as seed ortholog is 100%.

Group of orthologs #2214. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.ramorum:64

H2XTG7              	100.00%		H3G5L6              	100.00%
Bootstrap support for H2XTG7 as seed ortholog is 100%.
Bootstrap support for H3G5L6 as seed ortholog is 100%.

Group of orthologs #2215. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.ramorum:64

F6PYG2              	100.00%		H3HCQ3              	100.00%
Bootstrap support for F6PYG2 as seed ortholog is 100%.
Bootstrap support for H3HCQ3 as seed ortholog is 100%.

Group of orthologs #2216. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.ramorum:64

F6YSQ6              	100.00%		H3GXE4              	100.00%
Bootstrap support for F6YSQ6 as seed ortholog is 100%.
Bootstrap support for H3GXE4 as seed ortholog is 100%.

Group of orthologs #2217. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.ramorum:64

H2Y219              	100.00%		H3GJ40              	100.00%
Bootstrap support for H2Y219 as seed ortholog is 100%.
Bootstrap support for H3GJ40 as seed ortholog is 100%.

Group of orthologs #2218. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.ramorum:64

F7BFF4              	100.00%		H3H3X3              	100.00%
Bootstrap support for F7BFF4 as seed ortholog is 100%.
Bootstrap support for H3H3X3 as seed ortholog is 100%.

Group of orthologs #2219. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.ramorum:64

F7BPC9              	100.00%		H3HDB0              	100.00%
Bootstrap support for F7BPC9 as seed ortholog is 100%.
Bootstrap support for H3HDB0 as seed ortholog is 100%.

Group of orthologs #2220. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 P.ramorum:63

F6QN05              	100.00%		H3GQH5              	100.00%
                    	       		H3GRT0              	5.13%
Bootstrap support for F6QN05 as seed ortholog is 100%.
Bootstrap support for H3GQH5 as seed ortholog is 100%.

Group of orthologs #2221. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 P.ramorum:63

F6XY19              	100.00%		H3GT83              	100.00%
                    	       		H3GT79              	39.80%
Bootstrap support for F6XY19 as seed ortholog is 100%.
Bootstrap support for H3GT83 as seed ortholog is 100%.

Group of orthologs #2222. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 P.ramorum:63

H2XM22              	100.00%		H3G7D6              	100.00%
Bootstrap support for H2XM22 as seed ortholog is 100%.
Bootstrap support for H3G7D6 as seed ortholog is 100%.

Group of orthologs #2223. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 P.ramorum:63

F6SFT9              	100.00%		H3GYJ9              	100.00%
Bootstrap support for F6SFT9 as seed ortholog is 100%.
Bootstrap support for H3GYJ9 as seed ortholog is 100%.

Group of orthologs #2224. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 P.ramorum:63

H2XTC9              	100.00%		H3GID5              	100.00%
Bootstrap support for H2XTC9 as seed ortholog is 100%.
Bootstrap support for H3GID5 as seed ortholog is 100%.

Group of orthologs #2225. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 P.ramorum:63

H2XWZ6              	100.00%		H3GZB6              	100.00%
Bootstrap support for H2XWZ6 as seed ortholog is 100%.
Bootstrap support for H3GZB6 as seed ortholog is 100%.

Group of orthologs #2226. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 P.ramorum:63

H2Y088              	100.00%		H3H108              	100.00%
Bootstrap support for H2Y088 as seed ortholog is 100%.
Bootstrap support for H3H108 as seed ortholog is 100%.

Group of orthologs #2227. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.ramorum:62

F6TF85              	100.00%		H3GL85              	100.00%
Bootstrap support for F6TF85 as seed ortholog is 100%.
Bootstrap support for H3GL85 as seed ortholog is 100%.

Group of orthologs #2228. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.ramorum:62

F6XW35              	100.00%		H3GCJ8              	100.00%
Bootstrap support for F6XW35 as seed ortholog is 100%.
Bootstrap support for H3GCJ8 as seed ortholog is 100%.

Group of orthologs #2229. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.ramorum:62

F6WHP2              	100.00%		H3GK54              	100.00%
Bootstrap support for F6WHP2 as seed ortholog is 100%.
Bootstrap support for H3GK54 as seed ortholog is 100%.

Group of orthologs #2230. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.ramorum:62

H2XLX2              	100.00%		H3GCH3              	100.00%
Bootstrap support for H2XLX2 as seed ortholog is 100%.
Bootstrap support for H3GCH3 as seed ortholog is 100%.

Group of orthologs #2231. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.ramorum:62

F7BEP5              	100.00%		H3GLP9              	100.00%
Bootstrap support for F7BEP5 as seed ortholog is 100%.
Bootstrap support for H3GLP9 as seed ortholog is 100%.

Group of orthologs #2232. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.ramorum:62

F6QW82              	100.00%		H3HBP6              	100.00%
Bootstrap support for F6QW82 as seed ortholog is 100%.
Bootstrap support for H3HBP6 as seed ortholog is 100%.

Group of orthologs #2233. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.ramorum:62

F7A9T3              	100.00%		H3GWZ0              	100.00%
Bootstrap support for F7A9T3 as seed ortholog is 100%.
Bootstrap support for H3GWZ0 as seed ortholog is 100%.

Group of orthologs #2234. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.ramorum:62

H2XZW2              	100.00%		H3GD79              	100.00%
Bootstrap support for H2XZW2 as seed ortholog is 100%.
Bootstrap support for H3GD79 as seed ortholog is 100%.

Group of orthologs #2235. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.ramorum:62

F6YWH4              	100.00%		H3HBE7              	100.00%
Bootstrap support for F6YWH4 as seed ortholog is 100%.
Bootstrap support for H3HBE7 as seed ortholog is 100%.

Group of orthologs #2236. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.ramorum:61

F6Y3J4              	100.00%		H3H297              	100.00%
F6YVW8              	100.00%		H3H298              	100.00%
H2Y0E6              	42.12%		H3H296              	79.74%
                    	       		H3GAN5              	58.01%
                    	       		H3GAN8              	50.64%
                    	       		H3GAN7              	49.91%
                    	       		H3GAN6              	48.07%
                    	       		H3GAN4              	45.12%
                    	       		H3G8F8              	40.70%
                    	       		H3GAJ4              	35.82%
                    	       		H3GAJ3              	35.46%
                    	       		H3H8L5              	24.68%
Bootstrap support for F6Y3J4 as seed ortholog is 100%.
Bootstrap support for F6YVW8 as seed ortholog is 100%.
Bootstrap support for H3H297 as seed ortholog is 100%.
Bootstrap support for H3H298 as seed ortholog is 100%.

Group of orthologs #2237. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 P.ramorum:61

F6PHZ4              	100.00%		H3GJN8              	100.00%
Bootstrap support for F6PHZ4 as seed ortholog is 52%.
Alternative seed ortholog is H2XVP4 (1 bits away from this cluster)
Bootstrap support for H3GJN8 as seed ortholog is 100%.

Group of orthologs #2238. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.ramorum:61

H2XRH0              	100.00%		H3GLQ8              	100.00%
Bootstrap support for H2XRH0 as seed ortholog is 100%.
Bootstrap support for H3GLQ8 as seed ortholog is 100%.

Group of orthologs #2239. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.ramorum:61

H2XYP5              	100.00%		H3HC05              	100.00%
Bootstrap support for H2XYP5 as seed ortholog is 100%.
Bootstrap support for H3HC05 as seed ortholog is 100%.

Group of orthologs #2240. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.ramorum:60

F6V9P3              	100.00%		H3GBD4              	100.00%
Bootstrap support for F6V9P3 as seed ortholog is 100%.
Bootstrap support for H3GBD4 as seed ortholog is 100%.

Group of orthologs #2241. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.ramorum:60

F6T8J5              	100.00%		H3H568              	100.00%
Bootstrap support for F6T8J5 as seed ortholog is 100%.
Bootstrap support for H3H568 as seed ortholog is 100%.

Group of orthologs #2242. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.ramorum:60

F6X8P5              	100.00%		H3HCB2              	100.00%
Bootstrap support for F6X8P5 as seed ortholog is 100%.
Bootstrap support for H3HCB2 as seed ortholog is 100%.

Group of orthologs #2243. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.ramorum:60

F6Z315              	100.00%		H3HC18              	100.00%
Bootstrap support for F6Z315 as seed ortholog is 100%.
Bootstrap support for H3HC18 as seed ortholog is 100%.

Group of orthologs #2244. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.ramorum:59

F6V5N5              	100.00%		H3GVA0              	100.00%
F6T0R8              	14.59%		H3H545              	25.74%
                    	       		H3H551              	18.64%
                    	       		H3H666              	18.64%
                    	       		H3H7R9              	18.34%
                    	       		H3H543              	14.79%
                    	       		H3GPJ7              	12.72%
                    	       		H3HCH8              	7.99%
                    	       		H3HCC7              	7.69%
                    	       		H3GNE6              	5.33%
Bootstrap support for F6V5N5 as seed ortholog is 100%.
Bootstrap support for H3GVA0 as seed ortholog is 100%.

Group of orthologs #2245. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 P.ramorum:59

F6RAU8              	100.00%		H3GR88              	100.00%
H2XUP5              	10.87%		
F6UXM4              	8.98%		
H2XX10              	8.75%		
F6SXL4              	7.09%		
F6VWP3              	5.91%		
Bootstrap support for F6RAU8 as seed ortholog is 64%.
Alternative seed ortholog is F6WRR0 (13 bits away from this cluster)
Bootstrap support for H3GR88 as seed ortholog is 100%.

Group of orthologs #2246. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 P.ramorum:59

F7AUP3              	100.00%		H3GZH9              	100.00%
F6ZYU1              	100.00%		H3GAB9              	100.00%
F7AY96              	90.41%		
F7AV59              	69.63%		
L7N0S5              	65.75%		
Bootstrap support for F7AUP3 as seed ortholog is 66%.
Alternative seed ortholog is F7BDX5 (15 bits away from this cluster)
Bootstrap support for F6ZYU1 as seed ortholog is 48%.
Alternative seed ortholog is F7BDX5 (15 bits away from this cluster)
Bootstrap support for H3GZH9 as seed ortholog is 100%.
Bootstrap support for H3GAB9 as seed ortholog is 100%.

Group of orthologs #2247. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.ramorum:59

F6U1C4              	100.00%		H3GHQ1              	100.00%
F6TZR8              	21.78%		
F6T780              	11.22%		
F6SPF7              	8.21%		
F6S968              	6.03%		
Bootstrap support for F6U1C4 as seed ortholog is 100%.
Bootstrap support for H3GHQ1 as seed ortholog is 100%.

Group of orthologs #2248. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.ramorum:59

F6W3K8              	100.00%		H3GV46              	100.00%
F7BIC8              	15.91%		
Bootstrap support for F6W3K8 as seed ortholog is 100%.
Bootstrap support for H3GV46 as seed ortholog is 100%.

Group of orthologs #2249. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.ramorum:59

H2XKU8              	100.00%		H3GFQ8              	100.00%
F6V2P6              	7.68%		
Bootstrap support for H2XKU8 as seed ortholog is 100%.
Bootstrap support for H3GFQ8 as seed ortholog is 100%.

Group of orthologs #2250. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 P.ramorum:59

F6QSN2              	100.00%		H3G7H7              	100.00%
Bootstrap support for F6QSN2 as seed ortholog is 62%.
Alternative seed ortholog is H2XVN1 (8 bits away from this cluster)
Bootstrap support for H3G7H7 as seed ortholog is 100%.

Group of orthologs #2251. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.ramorum:59

F6SXJ8              	100.00%		H3GEG1              	100.00%
Bootstrap support for F6SXJ8 as seed ortholog is 100%.
Bootstrap support for H3GEG1 as seed ortholog is 100%.

Group of orthologs #2252. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.ramorum:59

F6YJB7              	100.00%		H3GE15              	100.00%
Bootstrap support for F6YJB7 as seed ortholog is 100%.
Bootstrap support for H3GE15 as seed ortholog is 100%.

Group of orthologs #2253. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.ramorum:59

F6XN50              	100.00%		H3GJ99              	100.00%
Bootstrap support for F6XN50 as seed ortholog is 100%.
Bootstrap support for H3GJ99 as seed ortholog is 100%.

Group of orthologs #2254. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.ramorum:59

F7B8Z8              	100.00%		H3GFJ7              	100.00%
Bootstrap support for F7B8Z8 as seed ortholog is 100%.
Bootstrap support for H3GFJ7 as seed ortholog is 100%.

Group of orthologs #2255. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.ramorum:59

F6YX22              	100.00%		H3GYJ7              	100.00%
Bootstrap support for F6YX22 as seed ortholog is 100%.
Bootstrap support for H3GYJ7 as seed ortholog is 100%.

Group of orthologs #2256. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.ramorum:59

F7BD80              	100.00%		H3GWN0              	100.00%
Bootstrap support for F7BD80 as seed ortholog is 100%.
Bootstrap support for H3GWN0 as seed ortholog is 100%.

Group of orthologs #2257. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.ramorum:14

F6TDH1              	100.00%		H3H2B6              	100.00%
                    	       		H3GGN2              	93.77%
Bootstrap support for F6TDH1 as seed ortholog is 100%.
Bootstrap support for H3H2B6 as seed ortholog is 69%.
Alternative seed ortholog is H3H1S5 (14 bits away from this cluster)

Group of orthologs #2258. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.ramorum:58

H2XVS6              	100.00%		H3GE52              	100.00%
                    	       		H3H141              	6.08%
Bootstrap support for H2XVS6 as seed ortholog is 100%.
Bootstrap support for H3GE52 as seed ortholog is 100%.

Group of orthologs #2259. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.ramorum:10

Q69HP7              	100.00%		H3H1R9              	100.00%
Bootstrap support for Q69HP7 as seed ortholog is 100%.
Bootstrap support for H3H1R9 as seed ortholog is 70%.
Alternative seed ortholog is H3G901 (10 bits away from this cluster)

Group of orthologs #2260. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.ramorum:57

F6SQS1              	100.00%		H3G7N5              	100.00%
                    	       		H3H9Y5              	6.51%
Bootstrap support for F6SQS1 as seed ortholog is 100%.
Bootstrap support for H3G7N5 as seed ortholog is 100%.

Group of orthologs #2261. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.ramorum:57

F6UP66              	100.00%		H3GAP3              	100.00%
Bootstrap support for F6UP66 as seed ortholog is 100%.
Bootstrap support for H3GAP3 as seed ortholog is 100%.

Group of orthologs #2262. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.ramorum:57

F6VGF9              	100.00%		H3GCA7              	100.00%
Bootstrap support for F6VGF9 as seed ortholog is 100%.
Bootstrap support for H3GCA7 as seed ortholog is 100%.

Group of orthologs #2263. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.ramorum:1

F6U6C0              	100.00%		H3GRV2              	100.00%
Bootstrap support for F6U6C0 as seed ortholog is 100%.
Bootstrap support for H3GRV2 as seed ortholog is 50%.
Alternative seed ortholog is H3GIJ2 (1 bits away from this cluster)

Group of orthologs #2264. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.ramorum:57

F6TCG6              	100.00%		H3HBD5              	100.00%
Bootstrap support for F6TCG6 as seed ortholog is 100%.
Bootstrap support for H3HBD5 as seed ortholog is 100%.

Group of orthologs #2265. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.ramorum:57

H2XP82              	100.00%		H3HCJ8              	100.00%
Bootstrap support for H2XP82 as seed ortholog is 100%.
Bootstrap support for H3HCJ8 as seed ortholog is 100%.

Group of orthologs #2266. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.ramorum:57

H2XYR3              	100.00%		H3H784              	100.00%
Bootstrap support for H2XYR3 as seed ortholog is 100%.
Bootstrap support for H3H784 as seed ortholog is 100%.

Group of orthologs #2267. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.ramorum:56

F6Y844              	100.00%		H3H517              	100.00%
F6UBS1              	37.12%		
H2XP87              	33.27%		
Bootstrap support for F6Y844 as seed ortholog is 100%.
Bootstrap support for H3H517 as seed ortholog is 100%.

Group of orthologs #2268. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.ramorum:56

F6WW70              	100.00%		H3GRM8              	100.00%
                    	       		H3H1G5              	18.56%
Bootstrap support for F6WW70 as seed ortholog is 100%.
Bootstrap support for H3GRM8 as seed ortholog is 100%.

Group of orthologs #2269. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.ramorum:56

F6UBS8              	100.00%		H3GJ41              	100.00%
Bootstrap support for F6UBS8 as seed ortholog is 100%.
Bootstrap support for H3GJ41 as seed ortholog is 100%.

Group of orthologs #2270. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.ramorum:56

F6VI10              	100.00%		H3GGV6              	100.00%
Bootstrap support for F6VI10 as seed ortholog is 100%.
Bootstrap support for H3GGV6 as seed ortholog is 100%.

Group of orthologs #2271. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.ramorum:56

F6QDF2              	100.00%		H3GUD0              	100.00%
Bootstrap support for F6QDF2 as seed ortholog is 100%.
Bootstrap support for H3GUD0 as seed ortholog is 100%.

Group of orthologs #2272. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.ramorum:56

F7ARL3              	100.00%		H3GCQ3              	100.00%
Bootstrap support for F7ARL3 as seed ortholog is 100%.
Bootstrap support for H3GCQ3 as seed ortholog is 100%.

Group of orthologs #2273. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.ramorum:56

H2XYK0              	100.00%		H3GM96              	100.00%
Bootstrap support for H2XYK0 as seed ortholog is 100%.
Bootstrap support for H3GM96 as seed ortholog is 100%.

Group of orthologs #2274. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.ramorum:56

F7BNZ7              	100.00%		H3HCQ1              	100.00%
Bootstrap support for F7BNZ7 as seed ortholog is 100%.
Bootstrap support for H3HCQ1 as seed ortholog is 100%.

Group of orthologs #2275. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.ramorum:55

H2XL14              	100.00%		H3GUZ8              	100.00%
F6TIT1              	15.02%		
Bootstrap support for H2XL14 as seed ortholog is 100%.
Bootstrap support for H3GUZ8 as seed ortholog is 100%.

Group of orthologs #2276. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.ramorum:55

F6ZSX6              	100.00%		H3GH21              	100.00%
Bootstrap support for F6ZSX6 as seed ortholog is 100%.
Bootstrap support for H3GH21 as seed ortholog is 100%.

Group of orthologs #2277. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.ramorum:54

H2XZL1              	100.00%		H3H8S4              	100.00%
Bootstrap support for H2XZL1 as seed ortholog is 100%.
Bootstrap support for H3H8S4 as seed ortholog is 100%.

Group of orthologs #2278. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.ramorum:54

H2XZV0              	100.00%		H3HAA3              	100.00%
Bootstrap support for H2XZV0 as seed ortholog is 100%.
Bootstrap support for H3HAA3 as seed ortholog is 100%.

Group of orthologs #2279. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.ramorum:53

F6WDF7              	100.00%		H3G4Y6              	100.00%
F6YWW9              	69.54%		H3GQG2              	40.15%
F6SM76              	38.99%		H3H1Q8              	22.14%
F6WPG2              	35.60%		
F6QWQ4              	26.08%		
Bootstrap support for F6WDF7 as seed ortholog is 100%.
Bootstrap support for H3G4Y6 as seed ortholog is 100%.

Group of orthologs #2280. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.ramorum:53

F6S8K0              	100.00%		H3GE96              	100.00%
                    	       		H3GE95              	57.77%
                    	       		H3HB55              	37.24%
                    	       		H3GE97              	36.95%
Bootstrap support for F6S8K0 as seed ortholog is 100%.
Bootstrap support for H3GE96 as seed ortholog is 100%.

Group of orthologs #2281. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.ramorum:53

H2XLZ0              	100.00%		H3GQ37              	100.00%
F6RG85              	16.91%		H3H7U7              	36.75%
H2XLG0              	15.94%		
Bootstrap support for H2XLZ0 as seed ortholog is 100%.
Bootstrap support for H3GQ37 as seed ortholog is 100%.

Group of orthologs #2282. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.ramorum:53

H2Y1V5              	100.00%		H3GE35              	100.00%
H2XZG7              	21.88%		
H2XXW6              	6.25%		
Bootstrap support for H2Y1V5 as seed ortholog is 100%.
Bootstrap support for H3GE35 as seed ortholog is 100%.

Group of orthologs #2283. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.ramorum:53

F6QZE9              	100.00%		H3GTA1              	100.00%
Bootstrap support for F6QZE9 as seed ortholog is 100%.
Bootstrap support for H3GTA1 as seed ortholog is 100%.

Group of orthologs #2284. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 P.ramorum:4

F6Q062              	100.00%		H3G5S0              	100.00%
F7A141              	56.29%		
F6Y0S7              	47.68%		
F6PIA1              	27.15%		
F6XQJ5              	21.19%		
H2XRJ3              	9.93%		
Bootstrap support for F6Q062 as seed ortholog is 66%.
Alternative seed ortholog is H2Y1P7 (10 bits away from this cluster)
Bootstrap support for H3G5S0 as seed ortholog is 56%.
Alternative seed ortholog is H3G6M4 (4 bits away from this cluster)

Group of orthologs #2285. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.ramorum:52

F6RQK4              	100.00%		H3GEA0              	100.00%
H2XSH1              	29.75%		H3GEA3              	63.26%
                    	       		H3GEA4              	55.74%
                    	       		H3H7H0              	36.31%
Bootstrap support for F6RQK4 as seed ortholog is 100%.
Bootstrap support for H3GEA0 as seed ortholog is 100%.

Group of orthologs #2286. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.ramorum:52

F6V377              	100.00%		H3G4Z4              	100.00%
                    	       		H3GML1              	53.26%
                    	       		H3GML0              	41.03%
                    	       		H3GZR3              	22.83%
Bootstrap support for F6V377 as seed ortholog is 100%.
Bootstrap support for H3G4Z4 as seed ortholog is 100%.

Group of orthologs #2287. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:0 P.ramorum:52

H2Y1H5              	100.00%		H3G668              	100.00%
F7B2N2              	50.00%		
H2XX28              	16.35%		
F6YF53              	8.97%		
Bootstrap support for H2Y1H5 as seed ortholog is 56%.
Alternative seed ortholog is F7AM07 (0 bits away from this cluster)
Bootstrap support for H3G668 as seed ortholog is 100%.

Group of orthologs #2288. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.ramorum:52

F6PR08              	100.00%		H3GDK4              	100.00%
Bootstrap support for F6PR08 as seed ortholog is 100%.
Bootstrap support for H3GDK4 as seed ortholog is 100%.

Group of orthologs #2289. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.ramorum:52

F6ZVR2              	100.00%		H3G912              	100.00%
Bootstrap support for F6ZVR2 as seed ortholog is 100%.
Bootstrap support for H3G912 as seed ortholog is 100%.

Group of orthologs #2290. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.ramorum:52

F6XR53              	100.00%		H3GH26              	100.00%
Bootstrap support for F6XR53 as seed ortholog is 100%.
Bootstrap support for H3GH26 as seed ortholog is 100%.

Group of orthologs #2291. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.ramorum:52

F7BPT5              	100.00%		H3GMK3              	100.00%
Bootstrap support for F7BPT5 as seed ortholog is 100%.
Bootstrap support for H3GMK3 as seed ortholog is 100%.

Group of orthologs #2292. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.ramorum:52

F7BAE5              	100.00%		H3GXR6              	100.00%
Bootstrap support for F7BAE5 as seed ortholog is 100%.
Bootstrap support for H3GXR6 as seed ortholog is 100%.

Group of orthologs #2293. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 P.ramorum:0

F6ZLD5              	100.00%		H3G576              	100.00%
                    	       		H3G6I1              	54.41%
                    	       		H3GXX8              	39.71%
                    	       		H3G6F2              	31.62%
                    	       		H3G7N6              	25.74%
                    	       		H3G5K0              	24.26%
Bootstrap support for F6ZLD5 as seed ortholog is 52%.
Alternative seed ortholog is F6TE72 (2 bits away from this cluster)
Bootstrap support for H3G576 as seed ortholog is 47%.
Alternative seed ortholog is H3G5N4 (0 bits away from this cluster)

Group of orthologs #2294. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.ramorum:51

F6YDB9              	100.00%		H3H0E7              	100.00%
                    	       		H3GM13              	10.16%
Bootstrap support for F6YDB9 as seed ortholog is 100%.
Bootstrap support for H3H0E7 as seed ortholog is 100%.

Group of orthologs #2295. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.ramorum:51

F6XG24              	100.00%		H3GKP3              	100.00%
Bootstrap support for F6XG24 as seed ortholog is 100%.
Bootstrap support for H3GKP3 as seed ortholog is 100%.

Group of orthologs #2296. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.ramorum:50

F6T886              	100.00%		H3GW73              	100.00%
F7AUB9              	67.68%		
F7BDU0              	53.73%		
Bootstrap support for F6T886 as seed ortholog is 100%.
Bootstrap support for H3GW73 as seed ortholog is 100%.

Group of orthologs #2297. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.ramorum:50

F6XKA8              	100.00%		H3GQU0              	100.00%
H2XS26              	8.33%		H3H4K5              	100.00%
Bootstrap support for F6XKA8 as seed ortholog is 100%.
Bootstrap support for H3GQU0 as seed ortholog is 100%.
Bootstrap support for H3H4K5 as seed ortholog is 100%.

Group of orthologs #2298. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.ramorum:50

F6R035              	100.00%		H3GCL5              	100.00%
Bootstrap support for F6R035 as seed ortholog is 100%.
Bootstrap support for H3GCL5 as seed ortholog is 100%.

Group of orthologs #2299. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.ramorum:50

F6TNV5              	100.00%		H3GKN2              	100.00%
Bootstrap support for F6TNV5 as seed ortholog is 100%.
Bootstrap support for H3GKN2 as seed ortholog is 100%.

Group of orthologs #2300. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.ramorum:50

F7ALL0              	100.00%		H3G5H3              	100.00%
Bootstrap support for F7ALL0 as seed ortholog is 100%.
Bootstrap support for H3G5H3 as seed ortholog is 100%.

Group of orthologs #2301. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.ramorum:50

F6QH43              	100.00%		H3GTW3              	100.00%
Bootstrap support for F6QH43 as seed ortholog is 100%.
Bootstrap support for H3GTW3 as seed ortholog is 100%.

Group of orthologs #2302. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.ramorum:50

F6XYG2              	100.00%		H3GH41              	100.00%
Bootstrap support for F6XYG2 as seed ortholog is 100%.
Bootstrap support for H3GH41 as seed ortholog is 100%.

Group of orthologs #2303. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.ramorum:50

H2XLI1              	100.00%		H3GE23              	100.00%
Bootstrap support for H2XLI1 as seed ortholog is 100%.
Bootstrap support for H3GE23 as seed ortholog is 100%.

Group of orthologs #2304. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.ramorum:50

F6XM37              	100.00%		H3H1H2              	100.00%
Bootstrap support for F6XM37 as seed ortholog is 100%.
Bootstrap support for H3H1H2 as seed ortholog is 100%.

Group of orthologs #2305. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.ramorum:50

H2XYB2              	100.00%		H3GS23              	100.00%
Bootstrap support for H2XYB2 as seed ortholog is 100%.
Bootstrap support for H3GS23 as seed ortholog is 100%.

Group of orthologs #2306. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 P.ramorum:48

F6S8K9              	100.00%		H3GVH4              	100.00%
Bootstrap support for F6S8K9 as seed ortholog is 100%.
Bootstrap support for H3GVH4 as seed ortholog is 100%.

Group of orthologs #2307. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.ramorum:47

F6ZST9              	100.00%		H3GWC9              	100.00%
F6WJT4              	15.19%		H3GWC7              	56.75%
F6Y782              	12.89%		H3GVJ1              	49.53%
F6VN69              	9.17%		H3GVJ2              	48.12%
F6ZCN2              	8.88%		H3GWD0              	37.24%
H2XVY9              	8.31%		H3GWC8              	35.93%
H2XV23              	7.55%		
F7AXQ6              	7.45%		
F6T0V1              	7.26%		
H2XMT1              	6.97%		
F6R5Y6              	6.97%		
H2XWF3              	6.59%		
Bootstrap support for F6ZST9 as seed ortholog is 100%.
Bootstrap support for H3GWC9 as seed ortholog is 100%.

Group of orthologs #2308. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.ramorum:47

H2Y3G2              	100.00%		H3GXK5              	100.00%
                    	       		H3GXK6              	38.10%
                    	       		H3GXK7              	34.35%
                    	       		H3H1U0              	28.80%
                    	       		H3GXL7              	27.01%
Bootstrap support for H2Y3G2 as seed ortholog is 100%.
Bootstrap support for H3GXK5 as seed ortholog is 100%.

Group of orthologs #2309. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.ramorum:47

F6S4Y6              	100.00%		H3GJJ5              	100.00%
                    	       		H3GJS2              	100.00%
                    	       		H3GQ99              	36.56%
Bootstrap support for F6S4Y6 as seed ortholog is 100%.
Bootstrap support for H3GJJ5 as seed ortholog is 100%.
Bootstrap support for H3GJS2 as seed ortholog is 100%.

Group of orthologs #2310. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.ramorum:47

F6QLT5              	100.00%		H3H9K8              	100.00%
Bootstrap support for F6QLT5 as seed ortholog is 100%.
Bootstrap support for H3H9K8 as seed ortholog is 100%.

Group of orthologs #2311. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.ramorum:46

F6YXT8              	100.00%		H3GGB4              	100.00%
Bootstrap support for F6YXT8 as seed ortholog is 100%.
Bootstrap support for H3GGB4 as seed ortholog is 100%.

Group of orthologs #2312. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.ramorum:45

F6YLR6              	100.00%		H3HDK3              	100.00%
F6W9F7              	9.63%		H3GX05              	59.27%
H2XYL6              	5.95%		H3GX07              	55.30%
                    	       		H3GX02              	54.64%
                    	       		H3GX03              	50.33%
                    	       		H3GX04              	40.07%
                    	       		H3GNR6              	34.77%
                    	       		H3GWZ4              	26.49%
                    	       		H3GT31              	21.85%
                    	       		H3GFN5              	20.86%
                    	       		H3GQ78              	17.22%
                    	       		H3GFN1              	16.23%
                    	       		H3GFN4              	16.23%
                    	       		H3GFN2              	14.57%
                    	       		H3GFN3              	14.24%
Bootstrap support for F6YLR6 as seed ortholog is 100%.
Bootstrap support for H3HDK3 as seed ortholog is 100%.

Group of orthologs #2313. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.ramorum:45

F6T3B5              	100.00%		H3HDJ1              	100.00%
F6WK26              	100.00%		
F6PLJ3              	57.14%		
Bootstrap support for F6T3B5 as seed ortholog is 100%.
Bootstrap support for F6WK26 as seed ortholog is 100%.
Bootstrap support for H3HDJ1 as seed ortholog is 100%.

Group of orthologs #2314. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.ramorum:45

F6TTF4              	100.00%		H3GJ39              	100.00%
F6VVB7              	21.05%		
Bootstrap support for F6TTF4 as seed ortholog is 100%.
Bootstrap support for H3GJ39 as seed ortholog is 100%.

Group of orthologs #2315. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.ramorum:45

F6YXK3              	100.00%		H3GVY2              	100.00%
                    	       		H3GVX6              	36.31%
Bootstrap support for F6YXK3 as seed ortholog is 100%.
Bootstrap support for H3GVY2 as seed ortholog is 100%.

Group of orthologs #2316. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.ramorum:45

H2XVV1              	100.00%		H3G5I4              	100.00%
Bootstrap support for H2XVV1 as seed ortholog is 100%.
Bootstrap support for H3G5I4 as seed ortholog is 100%.

Group of orthologs #2317. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.ramorum:45

F6ZBC2              	100.00%		H3GTJ5              	100.00%
Bootstrap support for F6ZBC2 as seed ortholog is 100%.
Bootstrap support for H3GTJ5 as seed ortholog is 100%.

Group of orthologs #2318. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.ramorum:45

H2XN49              	100.00%		H3GV84              	100.00%
Bootstrap support for H2XN49 as seed ortholog is 100%.
Bootstrap support for H3GV84 as seed ortholog is 100%.

Group of orthologs #2319. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.ramorum:44

F6ZYZ9              	100.00%		H3H0T5              	100.00%
F7AV03              	57.14%		
H2XPA6              	40.73%		
F6Y7J1              	29.64%		
F6ZNT5              	29.03%		
F6QP54              	27.36%		
F6XHN7              	26.60%		
F6ZAA5              	24.32%		
F6XHS1              	24.01%		
F6ZNS9              	21.73%		
F6SAU0              	20.52%		
F6SQW0              	19.30%		
H2Y2F5              	17.63%		
F6TLK5              	12.16%		
F6X329              	11.25%		
F7BDB7              	9.57%		
L7N0U7              	9.27%		
F6X245              	8.66%		
F6W949              	7.60%		
H2Y252              	7.14%		
Bootstrap support for F6ZYZ9 as seed ortholog is 100%.
Bootstrap support for H3H0T5 as seed ortholog is 100%.

Group of orthologs #2320. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.ramorum:44

F7B6R3              	100.00%		H3GKP1              	100.00%
                    	       		H3GKP2              	97.62%
                    	       		H3HD17              	81.90%
Bootstrap support for F7B6R3 as seed ortholog is 100%.
Bootstrap support for H3GKP1 as seed ortholog is 100%.

Group of orthologs #2321. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.ramorum:44

F6Z5N9              	100.00%		H3GEB4              	100.00%
                    	       		H3H9P8              	100.00%
Bootstrap support for F6Z5N9 as seed ortholog is 100%.
Bootstrap support for H3GEB4 as seed ortholog is 100%.
Bootstrap support for H3H9P8 as seed ortholog is 100%.

Group of orthologs #2322. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.ramorum:44

F7AAA7              	100.00%		H3GW67              	100.00%
                    	       		H3GBF4              	12.86%
Bootstrap support for F7AAA7 as seed ortholog is 100%.
Bootstrap support for H3GW67 as seed ortholog is 100%.

Group of orthologs #2323. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.ramorum:44

F6QFI4              	100.00%		H3GFS1              	100.00%
Bootstrap support for F6QFI4 as seed ortholog is 100%.
Bootstrap support for H3GFS1 as seed ortholog is 100%.

Group of orthologs #2324. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.ramorum:44

H2XL09              	100.00%		H3GBP6              	100.00%
Bootstrap support for H2XL09 as seed ortholog is 100%.
Bootstrap support for H3GBP6 as seed ortholog is 100%.

Group of orthologs #2325. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.ramorum:1

F6PII0              	100.00%		H3HBX8              	100.00%
Bootstrap support for F6PII0 as seed ortholog is 100%.
Bootstrap support for H3HBX8 as seed ortholog is 50%.
Alternative seed ortholog is H3GGJ4 (1 bits away from this cluster)

Group of orthologs #2326. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.ramorum:44

H2XMY1              	100.00%		H3HD75              	100.00%
Bootstrap support for H2XMY1 as seed ortholog is 100%.
Bootstrap support for H3HD75 as seed ortholog is 100%.

Group of orthologs #2327. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 P.ramorum:43

H2Y234              	100.00%		H3H1F8              	100.00%
H2Y3S3              	36.41%		
Bootstrap support for H2Y234 as seed ortholog is 100%.
Bootstrap support for H3H1F8 as seed ortholog is 100%.

Group of orthologs #2328. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.ramorum:42

F6SY55              	100.00%		H3GY50              	100.00%
                    	       		H3GEC5              	20.19%
                    	       		H3H8T4              	17.17%
                    	       		H3H5T9              	16.59%
                    	       		H3GUY7              	14.97%
                    	       		H3GKY9              	14.85%
                    	       		H3GNN0              	13.11%
                    	       		H3GLP2              	13.11%
                    	       		H3GPB5              	12.88%
                    	       		H3GGX0              	12.30%
                    	       		H3GFM1              	10.90%
                    	       		H3H146              	10.32%
                    	       		H3H7M9              	8.93%
                    	       		H3H9K3              	6.38%
Bootstrap support for F6SY55 as seed ortholog is 100%.
Bootstrap support for H3GY50 as seed ortholog is 100%.

Group of orthologs #2329. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.ramorum:42

F7ARN8              	100.00%		H3GI70              	100.00%
Bootstrap support for F7ARN8 as seed ortholog is 100%.
Bootstrap support for H3GI70 as seed ortholog is 100%.

Group of orthologs #2330. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.ramorum:42

F6YPB3              	100.00%		H3HCM3              	100.00%
Bootstrap support for F6YPB3 as seed ortholog is 100%.
Bootstrap support for H3HCM3 as seed ortholog is 100%.

Group of orthologs #2331. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.ramorum:41

H2Y2F8              	100.00%		H3H9E2              	100.00%
                    	       		H3H8R1              	41.48%
Bootstrap support for H2Y2F8 as seed ortholog is 100%.
Bootstrap support for H3H9E2 as seed ortholog is 100%.

Group of orthologs #2332. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.ramorum:41

F6YGY7              	100.00%		H3GCF4              	100.00%
Bootstrap support for F6YGY7 as seed ortholog is 100%.
Bootstrap support for H3GCF4 as seed ortholog is 100%.

Group of orthologs #2333. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.ramorum:41

H2XRN2              	100.00%		H3GEL2              	100.00%
Bootstrap support for H2XRN2 as seed ortholog is 100%.
Bootstrap support for H3GEL2 as seed ortholog is 100%.

Group of orthologs #2334. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.ramorum:41

F6V9V1              	100.00%		H3H5N3              	100.00%
Bootstrap support for F6V9V1 as seed ortholog is 100%.
Bootstrap support for H3H5N3 as seed ortholog is 100%.

Group of orthologs #2335. Best score 40 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.ramorum:40

H2XKC2              	100.00%		H3GB33              	100.00%
                    	       		H3H9B2              	73.83%
                    	       		H3H5R5              	62.95%
                    	       		H3HA01              	57.25%
                    	       		H3H7C8              	52.07%
                    	       		H3GVH1              	48.19%
                    	       		H3H848              	37.05%
                    	       		H3H9H1              	37.05%
                    	       		H3H8Y8              	36.79%
                    	       		H3H9W1              	36.79%
                    	       		H3H951              	36.27%
                    	       		H3H9D7              	36.27%
                    	       		H3H8J6              	36.27%
                    	       		H3H904              	36.01%
                    	       		H3H749              	35.75%
                    	       		H3H7G9              	34.46%
                    	       		H3GB78              	31.35%
                    	       		H3GBA0              	29.53%
                    	       		H3H945              	29.53%
                    	       		H3H911              	29.02%
                    	       		H3H7D0              	28.50%
                    	       		H3H9N3              	25.91%
                    	       		H3H9T0              	25.91%
                    	       		H3H9Z7              	25.39%
                    	       		H3H637              	24.35%
                    	       		H3H9I4              	24.35%
                    	       		H3H3U4              	23.32%
                    	       		H3HAJ4              	23.06%
                    	       		H3H5T7              	16.32%
                    	       		H3H992              	12.69%
                    	       		H3H6Z1              	12.44%
Bootstrap support for H2XKC2 as seed ortholog is 100%.
Bootstrap support for H3GB33 as seed ortholog is 100%.

Group of orthologs #2336. Best score 40 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.ramorum:40

F7AMF2              	100.00%		H3HDR4              	100.00%
F6SZL1              	66.83%		
Bootstrap support for F7AMF2 as seed ortholog is 100%.
Bootstrap support for H3HDR4 as seed ortholog is 100%.