###################################
2280 groups of orthologs
2856 in-paralogs from C.intestinalis
2601 in-paralogs from P.pallidum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 2229 bits
Score difference with first non-orthologous sequence - C.intestinalis:2229 P.pallidum:831

F6ZLB7              	100.00%		D3BVM0              	100.00%
Bootstrap support for F6ZLB7 as seed ortholog is 100%.
Bootstrap support for D3BVM0 as seed ortholog is 100%.

Group of orthologs #2. Best score 1949 bits
Score difference with first non-orthologous sequence - C.intestinalis:1949 P.pallidum:1187

F6SUC2              	100.00%		D3BJK4              	100.00%
Bootstrap support for F6SUC2 as seed ortholog is 100%.
Bootstrap support for D3BJK4 as seed ortholog is 100%.

Group of orthologs #3. Best score 1865 bits
Score difference with first non-orthologous sequence - C.intestinalis:1865 P.pallidum:1865

F7AMF6              	100.00%		D3BNB1              	100.00%
Bootstrap support for F7AMF6 as seed ortholog is 100%.
Bootstrap support for D3BNB1 as seed ortholog is 100%.

Group of orthologs #4. Best score 1696 bits
Score difference with first non-orthologous sequence - C.intestinalis:1696 P.pallidum:1696

F6T0F1              	100.00%		D3BI99              	100.00%
Bootstrap support for F6T0F1 as seed ortholog is 100%.
Bootstrap support for D3BI99 as seed ortholog is 100%.

Group of orthologs #5. Best score 1579 bits
Score difference with first non-orthologous sequence - C.intestinalis:1579 P.pallidum:1579

F6WUQ7              	100.00%		D3BMV7              	100.00%
Bootstrap support for F6WUQ7 as seed ortholog is 100%.
Bootstrap support for D3BMV7 as seed ortholog is 100%.

Group of orthologs #6. Best score 1492 bits
Score difference with first non-orthologous sequence - C.intestinalis:1492 P.pallidum:1492

H2Y1G0              	100.00%		D3BM55              	100.00%
Bootstrap support for H2Y1G0 as seed ortholog is 100%.
Bootstrap support for D3BM55 as seed ortholog is 100%.

Group of orthologs #7. Best score 1487 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 P.pallidum:1487

F6ZKS0              	100.00%		D3BP40              	100.00%
Bootstrap support for F6ZKS0 as seed ortholog is 61%.
Alternative seed ortholog is F6V620 (21 bits away from this cluster)
Bootstrap support for D3BP40 as seed ortholog is 100%.

Group of orthologs #8. Best score 1351 bits
Score difference with first non-orthologous sequence - C.intestinalis:1351 P.pallidum:626

F6QR00              	100.00%		D3BHD6              	100.00%
Bootstrap support for F6QR00 as seed ortholog is 100%.
Bootstrap support for D3BHD6 as seed ortholog is 100%.

Group of orthologs #9. Best score 1321 bits
Score difference with first non-orthologous sequence - C.intestinalis:1321 P.pallidum:1321

F6XJM1              	100.00%		D3BLR5              	100.00%
Bootstrap support for F6XJM1 as seed ortholog is 100%.
Bootstrap support for D3BLR5 as seed ortholog is 100%.

Group of orthologs #10. Best score 1312 bits
Score difference with first non-orthologous sequence - C.intestinalis:787 P.pallidum:534

F6YKR9              	100.00%		D3AVT3              	100.00%
Bootstrap support for F6YKR9 as seed ortholog is 100%.
Bootstrap support for D3AVT3 as seed ortholog is 100%.

Group of orthologs #11. Best score 1305 bits
Score difference with first non-orthologous sequence - C.intestinalis:1305 P.pallidum:1305

F6TIR0              	100.00%		D3B847              	100.00%
Bootstrap support for F6TIR0 as seed ortholog is 100%.
Bootstrap support for D3B847 as seed ortholog is 100%.

Group of orthologs #12. Best score 1233 bits
Score difference with first non-orthologous sequence - C.intestinalis:1107 P.pallidum:1233

F7AKQ3              	100.00%		D3BUX1              	100.00%
Bootstrap support for F7AKQ3 as seed ortholog is 100%.
Bootstrap support for D3BUX1 as seed ortholog is 100%.

Group of orthologs #13. Best score 1186 bits
Score difference with first non-orthologous sequence - C.intestinalis:1186 P.pallidum:698

F6VLN4              	100.00%		D3BIX9              	100.00%
Bootstrap support for F6VLN4 as seed ortholog is 100%.
Bootstrap support for D3BIX9 as seed ortholog is 100%.

Group of orthologs #14. Best score 1151 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 P.pallidum:1151

F6W0Y5              	100.00%		D3BKT1              	100.00%
F6V519              	20.82%		
Bootstrap support for F6W0Y5 as seed ortholog is 100%.
Bootstrap support for D3BKT1 as seed ortholog is 100%.

Group of orthologs #15. Best score 1129 bits
Score difference with first non-orthologous sequence - C.intestinalis:1129 P.pallidum:1129

F6W1H2              	100.00%		D3B3V5              	100.00%
Bootstrap support for F6W1H2 as seed ortholog is 100%.
Bootstrap support for D3B3V5 as seed ortholog is 100%.

Group of orthologs #16. Best score 1106 bits
Score difference with first non-orthologous sequence - C.intestinalis:1106 P.pallidum:418

F6UYA6              	100.00%		D3BB51              	100.00%
Bootstrap support for F6UYA6 as seed ortholog is 100%.
Bootstrap support for D3BB51 as seed ortholog is 100%.

Group of orthologs #17. Best score 1102 bits
Score difference with first non-orthologous sequence - C.intestinalis:1102 P.pallidum:511

H2XZY7              	100.00%		D3B0C6              	100.00%
H2Y265              	8.18%		
H2XWY7              	8.07%		
F7AY44              	7.73%		
Bootstrap support for H2XZY7 as seed ortholog is 100%.
Bootstrap support for D3B0C6 as seed ortholog is 100%.

Group of orthologs #18. Best score 1081 bits
Score difference with first non-orthologous sequence - C.intestinalis:1081 P.pallidum:597

F6WXT4              	100.00%		D3BFQ2              	100.00%
Bootstrap support for F6WXT4 as seed ortholog is 100%.
Bootstrap support for D3BFQ2 as seed ortholog is 100%.

Group of orthologs #19. Best score 1075 bits
Score difference with first non-orthologous sequence - C.intestinalis:1075 P.pallidum:1075

F6U9F4              	100.00%		D3BM47              	100.00%
Bootstrap support for F6U9F4 as seed ortholog is 100%.
Bootstrap support for D3BM47 as seed ortholog is 100%.

Group of orthologs #20. Best score 1075 bits
Score difference with first non-orthologous sequence - C.intestinalis:1075 P.pallidum:165

F7AKG2              	100.00%		D3B7U7              	100.00%
Bootstrap support for F7AKG2 as seed ortholog is 100%.
Bootstrap support for D3B7U7 as seed ortholog is 97%.

Group of orthologs #21. Best score 1067 bits
Score difference with first non-orthologous sequence - C.intestinalis:1067 P.pallidum:1067

F6YYG7              	100.00%		D3AWX9              	100.00%
Bootstrap support for F6YYG7 as seed ortholog is 100%.
Bootstrap support for D3AWX9 as seed ortholog is 100%.

Group of orthologs #22. Best score 1059 bits
Score difference with first non-orthologous sequence - C.intestinalis:1059 P.pallidum:1059

F6YN07              	100.00%		D3B599              	100.00%
Bootstrap support for F6YN07 as seed ortholog is 100%.
Bootstrap support for D3B599 as seed ortholog is 100%.

Group of orthologs #23. Best score 1051 bits
Score difference with first non-orthologous sequence - C.intestinalis:606 P.pallidum:622

H2XZZ5              	100.00%		D3B2A8              	100.00%
Bootstrap support for H2XZZ5 as seed ortholog is 100%.
Bootstrap support for D3B2A8 as seed ortholog is 100%.

Group of orthologs #24. Best score 1038 bits
Score difference with first non-orthologous sequence - C.intestinalis:1038 P.pallidum:273

F6XKY1              	100.00%		D3BU68              	100.00%
Bootstrap support for F6XKY1 as seed ortholog is 100%.
Bootstrap support for D3BU68 as seed ortholog is 100%.

Group of orthologs #25. Best score 1025 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 P.pallidum:185

F6PGX9              	100.00%		D3B5K6              	100.00%
Bootstrap support for F6PGX9 as seed ortholog is 99%.
Bootstrap support for D3B5K6 as seed ortholog is 99%.

Group of orthologs #26. Best score 1021 bits
Score difference with first non-orthologous sequence - C.intestinalis:1021 P.pallidum:383

F6U4V1              	100.00%		D3BPX4              	100.00%
Bootstrap support for F6U4V1 as seed ortholog is 100%.
Bootstrap support for D3BPX4 as seed ortholog is 100%.

Group of orthologs #27. Best score 1019 bits
Score difference with first non-orthologous sequence - C.intestinalis:945 P.pallidum:1019

F6YD90              	100.00%		D3B015              	100.00%
Bootstrap support for F6YD90 as seed ortholog is 100%.
Bootstrap support for D3B015 as seed ortholog is 100%.

Group of orthologs #28. Best score 1010 bits
Score difference with first non-orthologous sequence - C.intestinalis:1010 P.pallidum:1010

F7BKT8              	100.00%		D3BD99              	100.00%
Bootstrap support for F7BKT8 as seed ortholog is 100%.
Bootstrap support for D3BD99 as seed ortholog is 100%.

Group of orthologs #29. Best score 990 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 P.pallidum:630

F6W8I3              	100.00%		D3B545              	100.00%
                    	       		D3AVQ2              	37.21%
Bootstrap support for F6W8I3 as seed ortholog is 99%.
Bootstrap support for D3B545 as seed ortholog is 100%.

Group of orthologs #30. Best score 988 bits
Score difference with first non-orthologous sequence - C.intestinalis:988 P.pallidum:914

H2XJT1              	100.00%		D3BG39              	100.00%
Bootstrap support for H2XJT1 as seed ortholog is 100%.
Bootstrap support for D3BG39 as seed ortholog is 100%.

Group of orthologs #31. Best score 982 bits
Score difference with first non-orthologous sequence - C.intestinalis:982 P.pallidum:982

F6XQM9              	100.00%		D3B7Q6              	100.00%
Bootstrap support for F6XQM9 as seed ortholog is 100%.
Bootstrap support for D3B7Q6 as seed ortholog is 100%.

Group of orthologs #32. Best score 974 bits
Score difference with first non-orthologous sequence - C.intestinalis:974 P.pallidum:974

H2XQI5              	100.00%		D3BTI9              	100.00%
Bootstrap support for H2XQI5 as seed ortholog is 100%.
Bootstrap support for D3BTI9 as seed ortholog is 100%.

Group of orthologs #33. Best score 961 bits
Score difference with first non-orthologous sequence - C.intestinalis:961 P.pallidum:961

F6QRG3              	100.00%		D3B7S0              	100.00%
Bootstrap support for F6QRG3 as seed ortholog is 100%.
Bootstrap support for D3B7S0 as seed ortholog is 100%.

Group of orthologs #34. Best score 954 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 P.pallidum:716

F6WVU8              	100.00%		D3BQN9              	100.00%
F6S2T0              	11.89%		D3B2N2              	61.20%
F6U3N6              	8.03%		D3BQP1              	39.98%
                    	       		D3B9D6              	18.51%
Bootstrap support for F6WVU8 as seed ortholog is 99%.
Bootstrap support for D3BQN9 as seed ortholog is 100%.

Group of orthologs #35. Best score 947 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.pallidum:274

F6ZHQ8              	100.00%		D3BVP5              	100.00%
Bootstrap support for F6ZHQ8 as seed ortholog is 99%.
Bootstrap support for D3BVP5 as seed ortholog is 99%.

Group of orthologs #36. Best score 937 bits
Score difference with first non-orthologous sequence - C.intestinalis:937 P.pallidum:937

F7BBD1              	100.00%		D3BH29              	100.00%
Bootstrap support for F7BBD1 as seed ortholog is 100%.
Bootstrap support for D3BH29 as seed ortholog is 100%.

Group of orthologs #37. Best score 933 bits
Score difference with first non-orthologous sequence - C.intestinalis:933 P.pallidum:933

F6Y8C3              	100.00%		D3B5A9              	100.00%
Bootstrap support for F6Y8C3 as seed ortholog is 100%.
Bootstrap support for D3B5A9 as seed ortholog is 100%.

Group of orthologs #38. Best score 930 bits
Score difference with first non-orthologous sequence - C.intestinalis:930 P.pallidum:930

F7B9N2              	100.00%		D3BM96              	100.00%
Bootstrap support for F7B9N2 as seed ortholog is 100%.
Bootstrap support for D3BM96 as seed ortholog is 100%.

Group of orthologs #39. Best score 924 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 P.pallidum:132

F6TIZ3              	100.00%		D3BK04              	100.00%
Bootstrap support for F6TIZ3 as seed ortholog is 100%.
Bootstrap support for D3BK04 as seed ortholog is 96%.

Group of orthologs #40. Best score 917 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.pallidum:917

F7BPQ7              	100.00%		D3BM68              	100.00%
Bootstrap support for F7BPQ7 as seed ortholog is 99%.
Bootstrap support for D3BM68 as seed ortholog is 100%.

Group of orthologs #41. Best score 910 bits
Score difference with first non-orthologous sequence - C.intestinalis:910 P.pallidum:483

F6S181              	100.00%		D3B127              	100.00%
Bootstrap support for F6S181 as seed ortholog is 100%.
Bootstrap support for D3B127 as seed ortholog is 100%.

Group of orthologs #42. Best score 906 bits
Score difference with first non-orthologous sequence - C.intestinalis:802 P.pallidum:810

F6YYE4              	100.00%		D3BQ59              	100.00%
Bootstrap support for F6YYE4 as seed ortholog is 100%.
Bootstrap support for D3BQ59 as seed ortholog is 100%.

Group of orthologs #43. Best score 903 bits
Score difference with first non-orthologous sequence - C.intestinalis:903 P.pallidum:903

H2XQK9              	100.00%		D3B244              	100.00%
Bootstrap support for H2XQK9 as seed ortholog is 100%.
Bootstrap support for D3B244 as seed ortholog is 100%.

Group of orthologs #44. Best score 894 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 P.pallidum:711

Q4H2Q8              	100.00%		D3B1P3              	100.00%
Bootstrap support for Q4H2Q8 as seed ortholog is 100%.
Bootstrap support for D3B1P3 as seed ortholog is 100%.

Group of orthologs #45. Best score 889 bits
Score difference with first non-orthologous sequence - C.intestinalis:807 P.pallidum:798

F6XZ43              	100.00%		D3AZB7              	100.00%
Bootstrap support for F6XZ43 as seed ortholog is 100%.
Bootstrap support for D3AZB7 as seed ortholog is 100%.

Group of orthologs #46. Best score 878 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 P.pallidum:399

H2XY07              	100.00%		D3BBA2              	100.00%
Bootstrap support for H2XY07 as seed ortholog is 100%.
Bootstrap support for D3BBA2 as seed ortholog is 100%.

Group of orthologs #47. Best score 871 bits
Score difference with first non-orthologous sequence - C.intestinalis:871 P.pallidum:871

F6Y1Q3              	100.00%		D3BSF9              	100.00%
Bootstrap support for F6Y1Q3 as seed ortholog is 100%.
Bootstrap support for D3BSF9 as seed ortholog is 100%.

Group of orthologs #48. Best score 867 bits
Score difference with first non-orthologous sequence - C.intestinalis:867 P.pallidum:867

F6UM75              	100.00%		D3AZS3              	100.00%
Bootstrap support for F6UM75 as seed ortholog is 100%.
Bootstrap support for D3AZS3 as seed ortholog is 100%.

Group of orthologs #49. Best score 867 bits
Score difference with first non-orthologous sequence - C.intestinalis:867 P.pallidum:867

F7AJ84              	100.00%		D3BP16              	100.00%
Bootstrap support for F7AJ84 as seed ortholog is 100%.
Bootstrap support for D3BP16 as seed ortholog is 100%.

Group of orthologs #50. Best score 865 bits
Score difference with first non-orthologous sequence - C.intestinalis:865 P.pallidum:865

H2XJF3              	100.00%		D3BEU5              	100.00%
Bootstrap support for H2XJF3 as seed ortholog is 100%.
Bootstrap support for D3BEU5 as seed ortholog is 100%.

Group of orthologs #51. Best score 862 bits
Score difference with first non-orthologous sequence - C.intestinalis:862 P.pallidum:307

F6WNE0              	100.00%		D3BST1              	100.00%
Bootstrap support for F6WNE0 as seed ortholog is 100%.
Bootstrap support for D3BST1 as seed ortholog is 99%.

Group of orthologs #52. Best score 856 bits
Score difference with first non-orthologous sequence - C.intestinalis:741 P.pallidum:856

F7ADN1              	100.00%		D3BDE5              	100.00%
Bootstrap support for F7ADN1 as seed ortholog is 100%.
Bootstrap support for D3BDE5 as seed ortholog is 100%.

Group of orthologs #53. Best score 849 bits
Score difference with first non-orthologous sequence - C.intestinalis:849 P.pallidum:849

F6WWV8              	100.00%		D3BJM9              	100.00%
                    	       		D3BME3              	6.79%
Bootstrap support for F6WWV8 as seed ortholog is 100%.
Bootstrap support for D3BJM9 as seed ortholog is 100%.

Group of orthologs #54. Best score 846 bits
Score difference with first non-orthologous sequence - C.intestinalis:846 P.pallidum:734

F6Y4K6              	100.00%		D3BEG0              	100.00%
Bootstrap support for F6Y4K6 as seed ortholog is 100%.
Bootstrap support for D3BEG0 as seed ortholog is 100%.

Group of orthologs #55. Best score 843 bits
Score difference with first non-orthologous sequence - C.intestinalis:843 P.pallidum:843

H2XJT5              	100.00%		D3B700              	100.00%
Bootstrap support for H2XJT5 as seed ortholog is 100%.
Bootstrap support for D3B700 as seed ortholog is 100%.

Group of orthologs #56. Best score 832 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.pallidum:580

F6SXM4              	100.00%		D3BE43              	100.00%
F7BHA0              	12.31%		
Bootstrap support for F6SXM4 as seed ortholog is 99%.
Bootstrap support for D3BE43 as seed ortholog is 100%.

Group of orthologs #57. Best score 829 bits
Score difference with first non-orthologous sequence - C.intestinalis:829 P.pallidum:829

F6UXR3              	100.00%		D3B684              	100.00%
Bootstrap support for F6UXR3 as seed ortholog is 100%.
Bootstrap support for D3B684 as seed ortholog is 100%.

Group of orthologs #58. Best score 829 bits
Score difference with first non-orthologous sequence - C.intestinalis:829 P.pallidum:829

H2Y1Y9              	100.00%		D3BMK3              	100.00%
Bootstrap support for H2Y1Y9 as seed ortholog is 100%.
Bootstrap support for D3BMK3 as seed ortholog is 100%.

Group of orthologs #59. Best score 824 bits
Score difference with first non-orthologous sequence - C.intestinalis:824 P.pallidum:301

F6RW91              	100.00%		D3BMZ2              	100.00%
Bootstrap support for F6RW91 as seed ortholog is 100%.
Bootstrap support for D3BMZ2 as seed ortholog is 100%.

Group of orthologs #60. Best score 821 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 P.pallidum:485

H2Y1Z9              	100.00%		D3B7Q7              	100.00%
Bootstrap support for H2Y1Z9 as seed ortholog is 100%.
Bootstrap support for D3B7Q7 as seed ortholog is 100%.

Group of orthologs #61. Best score 812 bits
Score difference with first non-orthologous sequence - C.intestinalis:812 P.pallidum:812

F7BJA3              	100.00%		D3B3X9              	100.00%
Bootstrap support for F7BJA3 as seed ortholog is 100%.
Bootstrap support for D3B3X9 as seed ortholog is 100%.

Group of orthologs #62. Best score 799 bits
Score difference with first non-orthologous sequence - C.intestinalis:799 P.pallidum:799

F6SWL4              	100.00%		D3AYJ5              	100.00%
Bootstrap support for F6SWL4 as seed ortholog is 100%.
Bootstrap support for D3AYJ5 as seed ortholog is 100%.

Group of orthologs #63. Best score 784 bits
Score difference with first non-orthologous sequence - C.intestinalis:784 P.pallidum:784

F6YKS6              	100.00%		D3BL58              	100.00%
                    	       		D3BL57              	33.50%
Bootstrap support for F6YKS6 as seed ortholog is 100%.
Bootstrap support for D3BL58 as seed ortholog is 100%.

Group of orthologs #64. Best score 783 bits
Score difference with first non-orthologous sequence - C.intestinalis:783 P.pallidum:710

F6Z743              	100.00%		D3BC39              	100.00%
Bootstrap support for F6Z743 as seed ortholog is 100%.
Bootstrap support for D3BC39 as seed ortholog is 100%.

Group of orthologs #65. Best score 783 bits
Score difference with first non-orthologous sequence - C.intestinalis:783 P.pallidum:783

F7ANR5              	100.00%		D3B8I4              	100.00%
Bootstrap support for F7ANR5 as seed ortholog is 100%.
Bootstrap support for D3B8I4 as seed ortholog is 100%.

Group of orthologs #66. Best score 777 bits
Score difference with first non-orthologous sequence - C.intestinalis:777 P.pallidum:777

F6U4L6              	100.00%		D3B594              	100.00%
Bootstrap support for F6U4L6 as seed ortholog is 100%.
Bootstrap support for D3B594 as seed ortholog is 100%.

Group of orthologs #67. Best score 775 bits
Score difference with first non-orthologous sequence - C.intestinalis:660 P.pallidum:775

F7A8C2              	100.00%		D3B5K2              	100.00%
Bootstrap support for F7A8C2 as seed ortholog is 100%.
Bootstrap support for D3B5K2 as seed ortholog is 100%.

Group of orthologs #68. Best score 771 bits
Score difference with first non-orthologous sequence - C.intestinalis:771 P.pallidum:771

F6YNJ1              	100.00%		D3BEQ3              	100.00%
Bootstrap support for F6YNJ1 as seed ortholog is 100%.
Bootstrap support for D3BEQ3 as seed ortholog is 100%.

Group of orthologs #69. Best score 769 bits
Score difference with first non-orthologous sequence - C.intestinalis:769 P.pallidum:240

F6X056              	100.00%		D3BT75              	100.00%
F7A8L3              	100.00%		
Bootstrap support for F6X056 as seed ortholog is 100%.
Bootstrap support for F7A8L3 as seed ortholog is 100%.
Bootstrap support for D3BT75 as seed ortholog is 99%.

Group of orthologs #70. Best score 767 bits
Score difference with first non-orthologous sequence - C.intestinalis:767 P.pallidum:767

H2XTU1              	100.00%		D3BJF1              	100.00%
Bootstrap support for H2XTU1 as seed ortholog is 100%.
Bootstrap support for D3BJF1 as seed ortholog is 100%.

Group of orthologs #71. Best score 764 bits
Score difference with first non-orthologous sequence - C.intestinalis:764 P.pallidum:764

F6YQL6              	100.00%		D3BEZ7              	100.00%
Bootstrap support for F6YQL6 as seed ortholog is 100%.
Bootstrap support for D3BEZ7 as seed ortholog is 100%.

Group of orthologs #72. Best score 759 bits
Score difference with first non-orthologous sequence - C.intestinalis:759 P.pallidum:759

F6PV45              	100.00%		D3AYA7              	100.00%
                    	       		D3BVE1              	18.89%
Bootstrap support for F6PV45 as seed ortholog is 100%.
Bootstrap support for D3AYA7 as seed ortholog is 100%.

Group of orthologs #73. Best score 756 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 P.pallidum:756

F6Q9K0              	100.00%		D3BPX3              	100.00%
Bootstrap support for F6Q9K0 as seed ortholog is 99%.
Bootstrap support for D3BPX3 as seed ortholog is 100%.

Group of orthologs #74. Best score 751 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 P.pallidum:751

F7B9U5              	100.00%		D3AW74              	100.00%
Bootstrap support for F7B9U5 as seed ortholog is 100%.
Bootstrap support for D3AW74 as seed ortholog is 100%.

Group of orthologs #75. Best score 749 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.pallidum:749

H2Y0Q1              	100.00%		D3BPV1              	100.00%
Bootstrap support for H2Y0Q1 as seed ortholog is 99%.
Bootstrap support for D3BPV1 as seed ortholog is 100%.

Group of orthologs #76. Best score 743 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.pallidum:743

H2XU53              	100.00%		D3AY31              	100.00%
Bootstrap support for H2XU53 as seed ortholog is 100%.
Bootstrap support for D3AY31 as seed ortholog is 100%.

Group of orthologs #77. Best score 734 bits
Score difference with first non-orthologous sequence - C.intestinalis:734 P.pallidum:734

F6SBF1              	100.00%		D3B3L3              	100.00%
Bootstrap support for F6SBF1 as seed ortholog is 100%.
Bootstrap support for D3B3L3 as seed ortholog is 100%.

Group of orthologs #78. Best score 734 bits
Score difference with first non-orthologous sequence - C.intestinalis:734 P.pallidum:167

F6SI05              	100.00%		D3BMT5              	100.00%
Bootstrap support for F6SI05 as seed ortholog is 100%.
Bootstrap support for D3BMT5 as seed ortholog is 99%.

Group of orthologs #79. Best score 729 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 P.pallidum:40

A2SY09              	100.00%		D3B2M1              	100.00%
F6SCP4              	23.33%		D3BD07              	100.00%
                    	       		D3BM82              	63.33%
                    	       		D3BSX0              	60.00%
Bootstrap support for A2SY09 as seed ortholog is 86%.
Bootstrap support for D3B2M1 as seed ortholog is 98%.
Bootstrap support for D3BD07 as seed ortholog is 97%.

Group of orthologs #80. Best score 728 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 P.pallidum:543

F6UKC4              	100.00%		D3BMN4              	100.00%
Bootstrap support for F6UKC4 as seed ortholog is 100%.
Bootstrap support for D3BMN4 as seed ortholog is 100%.

Group of orthologs #81. Best score 720 bits
Score difference with first non-orthologous sequence - C.intestinalis:720 P.pallidum:474

F6TZX4              	100.00%		D3BBD1              	100.00%
Bootstrap support for F6TZX4 as seed ortholog is 100%.
Bootstrap support for D3BBD1 as seed ortholog is 100%.

Group of orthologs #82. Best score 717 bits
Score difference with first non-orthologous sequence - C.intestinalis:717 P.pallidum:500

F6QX34              	100.00%		D3BFC6              	100.00%
Bootstrap support for F6QX34 as seed ortholog is 100%.
Bootstrap support for D3BFC6 as seed ortholog is 100%.

Group of orthologs #83. Best score 715 bits
Score difference with first non-orthologous sequence - C.intestinalis:715 P.pallidum:715

F6Z3T2              	100.00%		D3B6G3              	100.00%
Bootstrap support for F6Z3T2 as seed ortholog is 100%.
Bootstrap support for D3B6G3 as seed ortholog is 100%.

Group of orthologs #84. Best score 713 bits
Score difference with first non-orthologous sequence - C.intestinalis:713 P.pallidum:713

F6RL41              	100.00%		D3BK67              	100.00%
Bootstrap support for F6RL41 as seed ortholog is 100%.
Bootstrap support for D3BK67 as seed ortholog is 100%.

Group of orthologs #85. Best score 713 bits
Score difference with first non-orthologous sequence - C.intestinalis:713 P.pallidum:324

H2XL55              	100.00%		D3B6I9              	100.00%
Bootstrap support for H2XL55 as seed ortholog is 100%.
Bootstrap support for D3B6I9 as seed ortholog is 100%.

Group of orthologs #86. Best score 708 bits
Score difference with first non-orthologous sequence - C.intestinalis:708 P.pallidum:708

F6Z5U4              	100.00%		D3B2J1              	100.00%
Bootstrap support for F6Z5U4 as seed ortholog is 100%.
Bootstrap support for D3B2J1 as seed ortholog is 100%.

Group of orthologs #87. Best score 708 bits
Score difference with first non-orthologous sequence - C.intestinalis:560 P.pallidum:708

F6THC9              	100.00%		D3BVH1              	100.00%
Bootstrap support for F6THC9 as seed ortholog is 100%.
Bootstrap support for D3BVH1 as seed ortholog is 100%.

Group of orthologs #88. Best score 703 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 P.pallidum:703

L7N0T3              	100.00%		D3BQW2              	100.00%
F6SYL0              	95.71%		
Bootstrap support for L7N0T3 as seed ortholog is 100%.
Bootstrap support for D3BQW2 as seed ortholog is 100%.

Group of orthologs #89. Best score 697 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 P.pallidum:697

F6PZ06              	100.00%		D3BIZ6              	100.00%
Bootstrap support for F6PZ06 as seed ortholog is 100%.
Bootstrap support for D3BIZ6 as seed ortholog is 100%.

Group of orthologs #90. Best score 697 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 P.pallidum:72

F6U7R9              	100.00%		D3BB49              	100.00%
Bootstrap support for F6U7R9 as seed ortholog is 100%.
Bootstrap support for D3BB49 as seed ortholog is 93%.

Group of orthologs #91. Best score 697 bits
Score difference with first non-orthologous sequence - C.intestinalis:697 P.pallidum:697

F6ZP18              	100.00%		D3B0U2              	100.00%
Bootstrap support for F6ZP18 as seed ortholog is 100%.
Bootstrap support for D3B0U2 as seed ortholog is 100%.

Group of orthologs #92. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:695 P.pallidum:695

F7BJC2              	100.00%		D3B5K0              	100.00%
Bootstrap support for F7BJC2 as seed ortholog is 100%.
Bootstrap support for D3B5K0 as seed ortholog is 100%.

Group of orthologs #93. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 P.pallidum:39

F6W6J2              	100.00%		D3BPD4              	100.00%
Bootstrap support for F6W6J2 as seed ortholog is 99%.
Bootstrap support for D3BPD4 as seed ortholog is 74%.
Alternative seed ortholog is D3BGI5 (39 bits away from this cluster)

Group of orthologs #94. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 P.pallidum:690

F6XCZ8              	100.00%		D3AWD2              	100.00%
F7B0Q2              	85.48%		D3BGV6              	57.99%
F6QB29              	85.06%		
F6SJ24              	84.65%		
F6QB20              	82.16%		
L7N0T5              	80.08%		
F6UV18              	31.54%		
Bootstrap support for F6XCZ8 as seed ortholog is 100%.
Bootstrap support for D3AWD2 as seed ortholog is 100%.

Group of orthologs #95. Best score 687 bits
Score difference with first non-orthologous sequence - C.intestinalis:687 P.pallidum:687

F6TML4              	100.00%		D3BSJ1              	100.00%
Bootstrap support for F6TML4 as seed ortholog is 100%.
Bootstrap support for D3BSJ1 as seed ortholog is 100%.

Group of orthologs #96. Best score 686 bits
Score difference with first non-orthologous sequence - C.intestinalis:686 P.pallidum:686

H2XLC6              	100.00%		D3B3Q9              	100.00%
Bootstrap support for H2XLC6 as seed ortholog is 100%.
Bootstrap support for D3B3Q9 as seed ortholog is 100%.

Group of orthologs #97. Best score 686 bits
Score difference with first non-orthologous sequence - C.intestinalis:686 P.pallidum:455

F7B8G8              	100.00%		D3BPJ6              	100.00%
Bootstrap support for F7B8G8 as seed ortholog is 100%.
Bootstrap support for D3BPJ6 as seed ortholog is 100%.

Group of orthologs #98. Best score 684 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.pallidum:574

F6USW1              	100.00%		D3BG99              	100.00%
                    	       		D3BGA0              	47.82%
                    	       		D3BB40              	24.61%
Bootstrap support for F6USW1 as seed ortholog is 89%.
Bootstrap support for D3BG99 as seed ortholog is 100%.

Group of orthologs #99. Best score 679 bits
Score difference with first non-orthologous sequence - C.intestinalis:679 P.pallidum:679

F6R356              	100.00%		D3BUD3              	100.00%
                    	       		D3BUC4              	39.80%
Bootstrap support for F6R356 as seed ortholog is 100%.
Bootstrap support for D3BUD3 as seed ortholog is 100%.

Group of orthologs #100. Best score 679 bits
Score difference with first non-orthologous sequence - C.intestinalis:546 P.pallidum:679

F7B2M5              	100.00%		D3B8D9              	100.00%
Bootstrap support for F7B2M5 as seed ortholog is 100%.
Bootstrap support for D3B8D9 as seed ortholog is 100%.

Group of orthologs #101. Best score 679 bits
Score difference with first non-orthologous sequence - C.intestinalis:679 P.pallidum:452

H2XVY7              	100.00%		D3BCV5              	100.00%
Bootstrap support for H2XVY7 as seed ortholog is 100%.
Bootstrap support for D3BCV5 as seed ortholog is 100%.

Group of orthologs #102. Best score 678 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:114

F6ZJN8              	100.00%		D3AYG7              	100.00%
Bootstrap support for F6ZJN8 as seed ortholog is 99%.
Bootstrap support for D3AYG7 as seed ortholog is 100%.

Group of orthologs #103. Best score 678 bits
Score difference with first non-orthologous sequence - C.intestinalis:678 P.pallidum:678

H2XQX5              	100.00%		D3BAM8              	100.00%
Bootstrap support for H2XQX5 as seed ortholog is 100%.
Bootstrap support for D3BAM8 as seed ortholog is 100%.

Group of orthologs #104. Best score 678 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.pallidum:525

H2XYN5              	100.00%		D3B6W7              	100.00%
Bootstrap support for H2XYN5 as seed ortholog is 91%.
Bootstrap support for D3B6W7 as seed ortholog is 100%.

Group of orthologs #105. Best score 676 bits
Score difference with first non-orthologous sequence - C.intestinalis:676 P.pallidum:676

F6R8X1              	100.00%		D3BI12              	100.00%
Bootstrap support for F6R8X1 as seed ortholog is 100%.
Bootstrap support for D3BI12 as seed ortholog is 100%.

Group of orthologs #106. Best score 673 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 P.pallidum:537

F6RHK8              	100.00%		D3BUA7              	100.00%
Bootstrap support for F6RHK8 as seed ortholog is 100%.
Bootstrap support for D3BUA7 as seed ortholog is 100%.

Group of orthologs #107. Best score 671 bits
Score difference with first non-orthologous sequence - C.intestinalis:671 P.pallidum:671

F6XN27              	100.00%		D3B3Y2              	100.00%
Bootstrap support for F6XN27 as seed ortholog is 100%.
Bootstrap support for D3B3Y2 as seed ortholog is 100%.

Group of orthologs #108. Best score 668 bits
Score difference with first non-orthologous sequence - C.intestinalis:668 P.pallidum:668

F6R8H4              	100.00%		D3BJL2              	100.00%
Bootstrap support for F6R8H4 as seed ortholog is 100%.
Bootstrap support for D3BJL2 as seed ortholog is 100%.

Group of orthologs #109. Best score 666 bits
Score difference with first non-orthologous sequence - C.intestinalis:666 P.pallidum:666

F6QZB5              	100.00%		D3BR60              	100.00%
Bootstrap support for F6QZB5 as seed ortholog is 100%.
Bootstrap support for D3BR60 as seed ortholog is 100%.

Group of orthologs #110. Best score 665 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 P.pallidum:665

F6YGU8              	100.00%		D3B0C2              	100.00%
F6RCK1              	11.80%		D3AZN2              	39.96%
Bootstrap support for F6YGU8 as seed ortholog is 100%.
Bootstrap support for D3B0C2 as seed ortholog is 100%.

Group of orthologs #111. Best score 665 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 P.pallidum:412

F6Q5L9              	100.00%		D3B143              	100.00%
Bootstrap support for F6Q5L9 as seed ortholog is 100%.
Bootstrap support for D3B143 as seed ortholog is 100%.

Group of orthologs #112. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:663 P.pallidum:663

F6RHA1              	100.00%		D3BB83              	100.00%
Bootstrap support for F6RHA1 as seed ortholog is 100%.
Bootstrap support for D3BB83 as seed ortholog is 100%.

Group of orthologs #113. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:663 P.pallidum:401

F6X3R5              	100.00%		D3B0W9              	100.00%
Bootstrap support for F6X3R5 as seed ortholog is 100%.
Bootstrap support for D3B0W9 as seed ortholog is 100%.

Group of orthologs #114. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 P.pallidum:663

F6Z6L6              	100.00%		D3BRG0              	100.00%
Bootstrap support for F6Z6L6 as seed ortholog is 100%.
Bootstrap support for D3BRG0 as seed ortholog is 100%.

Group of orthologs #115. Best score 661 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.pallidum:661

F6XCK4              	100.00%		D3BNY4              	100.00%
Bootstrap support for F6XCK4 as seed ortholog is 100%.
Bootstrap support for D3BNY4 as seed ortholog is 100%.

Group of orthologs #116. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 P.pallidum:659

F6UHM2              	100.00%		D3AY61              	100.00%
Bootstrap support for F6UHM2 as seed ortholog is 100%.
Bootstrap support for D3AY61 as seed ortholog is 100%.

Group of orthologs #117. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 P.pallidum:421

F7BEF3              	100.00%		D3B5E4              	100.00%
Bootstrap support for F7BEF3 as seed ortholog is 100%.
Bootstrap support for D3B5E4 as seed ortholog is 100%.

Group of orthologs #118. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 P.pallidum:351

F6W1I6              	100.00%		D3BG47              	100.00%
                    	       		D3BT92              	11.73%
                    	       		D3BF92              	9.77%
                    	       		D3BH58              	7.65%
Bootstrap support for F6W1I6 as seed ortholog is 100%.
Bootstrap support for D3BG47 as seed ortholog is 100%.

Group of orthologs #119. Best score 655 bits
Score difference with first non-orthologous sequence - C.intestinalis:655 P.pallidum:655

F6SSP0              	100.00%		D3AZW1              	100.00%
Bootstrap support for F6SSP0 as seed ortholog is 100%.
Bootstrap support for D3AZW1 as seed ortholog is 100%.

Group of orthologs #120. Best score 655 bits
Score difference with first non-orthologous sequence - C.intestinalis:655 P.pallidum:655

F7ABF6              	100.00%		D3BUF5              	100.00%
Bootstrap support for F7ABF6 as seed ortholog is 100%.
Bootstrap support for D3BUF5 as seed ortholog is 100%.

Group of orthologs #121. Best score 654 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 P.pallidum:345

F6Z4G6              	100.00%		D3B0M9              	100.00%
Bootstrap support for F6Z4G6 as seed ortholog is 100%.
Bootstrap support for D3B0M9 as seed ortholog is 100%.

Group of orthologs #122. Best score 651 bits
Score difference with first non-orthologous sequence - C.intestinalis:651 P.pallidum:410

F6XMA0              	100.00%		D3B3N8              	100.00%
Bootstrap support for F6XMA0 as seed ortholog is 100%.
Bootstrap support for D3B3N8 as seed ortholog is 100%.

Group of orthologs #123. Best score 651 bits
Score difference with first non-orthologous sequence - C.intestinalis:651 P.pallidum:233

F6YFY0              	100.00%		D3B255              	100.00%
Bootstrap support for F6YFY0 as seed ortholog is 100%.
Bootstrap support for D3B255 as seed ortholog is 100%.

Group of orthologs #124. Best score 648 bits
Score difference with first non-orthologous sequence - C.intestinalis:648 P.pallidum:460

F6W7K5              	100.00%		D3B0K9              	100.00%
F6W7I3              	81.68%		
Bootstrap support for F6W7K5 as seed ortholog is 100%.
Bootstrap support for D3B0K9 as seed ortholog is 100%.

Group of orthologs #125. Best score 648 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 P.pallidum:648

F6YR02              	100.00%		D3BHW3              	100.00%
Bootstrap support for F6YR02 as seed ortholog is 100%.
Bootstrap support for D3BHW3 as seed ortholog is 100%.

Group of orthologs #126. Best score 647 bits
Score difference with first non-orthologous sequence - C.intestinalis:647 P.pallidum:647

F6YQS6              	100.00%		D3BRS6              	100.00%
Bootstrap support for F6YQS6 as seed ortholog is 100%.
Bootstrap support for D3BRS6 as seed ortholog is 100%.

Group of orthologs #127. Best score 645 bits
Score difference with first non-orthologous sequence - C.intestinalis:645 P.pallidum:645

F6ZM86              	100.00%		D3B1K5              	100.00%
Bootstrap support for F6ZM86 as seed ortholog is 100%.
Bootstrap support for D3B1K5 as seed ortholog is 100%.

Group of orthologs #128. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 P.pallidum:253

F6YBA5              	100.00%		D3BAY0              	100.00%
Bootstrap support for F6YBA5 as seed ortholog is 100%.
Bootstrap support for D3BAY0 as seed ortholog is 100%.

Group of orthologs #129. Best score 641 bits
Score difference with first non-orthologous sequence - C.intestinalis:641 P.pallidum:641

F6ZZF2              	100.00%		D3BHN9              	100.00%
Bootstrap support for F6ZZF2 as seed ortholog is 100%.
Bootstrap support for D3BHN9 as seed ortholog is 100%.

Group of orthologs #130. Best score 639 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 P.pallidum:127

F6PW28              	100.00%		D3B2W9              	100.00%
Bootstrap support for F6PW28 as seed ortholog is 99%.
Bootstrap support for D3B2W9 as seed ortholog is 99%.

Group of orthologs #131. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:638 P.pallidum:638

F6R2U8              	100.00%		D3B6H8              	100.00%
Bootstrap support for F6R2U8 as seed ortholog is 100%.
Bootstrap support for D3B6H8 as seed ortholog is 100%.

Group of orthologs #132. Best score 635 bits
Score difference with first non-orthologous sequence - C.intestinalis:635 P.pallidum:635

F6U2U3              	100.00%		D3BSA3              	100.00%
Bootstrap support for F6U2U3 as seed ortholog is 100%.
Bootstrap support for D3BSA3 as seed ortholog is 100%.

Group of orthologs #133. Best score 632 bits
Score difference with first non-orthologous sequence - C.intestinalis:632 P.pallidum:570

F6Z761              	100.00%		D3BB77              	100.00%
Bootstrap support for F6Z761 as seed ortholog is 100%.
Bootstrap support for D3BB77 as seed ortholog is 100%.

Group of orthologs #134. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 P.pallidum:318

F6R472              	100.00%		D3BHJ6              	100.00%
Bootstrap support for F6R472 as seed ortholog is 99%.
Bootstrap support for D3BHJ6 as seed ortholog is 100%.

Group of orthologs #135. Best score 629 bits
Score difference with first non-orthologous sequence - C.intestinalis:629 P.pallidum:629

F6XY03              	100.00%		D3BK59              	100.00%
Bootstrap support for F6XY03 as seed ortholog is 100%.
Bootstrap support for D3BK59 as seed ortholog is 100%.

Group of orthologs #136. Best score 628 bits
Score difference with first non-orthologous sequence - C.intestinalis:628 P.pallidum:628

F6Q9P9              	100.00%		D3B7L4              	100.00%
Bootstrap support for F6Q9P9 as seed ortholog is 100%.
Bootstrap support for D3B7L4 as seed ortholog is 100%.

Group of orthologs #137. Best score 628 bits
Score difference with first non-orthologous sequence - C.intestinalis:628 P.pallidum:628

F6S0L5              	100.00%		D3BK91              	100.00%
Bootstrap support for F6S0L5 as seed ortholog is 100%.
Bootstrap support for D3BK91 as seed ortholog is 100%.

Group of orthologs #138. Best score 628 bits
Score difference with first non-orthologous sequence - C.intestinalis:628 P.pallidum:628

F6YXZ3              	100.00%		D3BTG6              	100.00%
Bootstrap support for F6YXZ3 as seed ortholog is 100%.
Bootstrap support for D3BTG6 as seed ortholog is 100%.

Group of orthologs #139. Best score 627 bits
Score difference with first non-orthologous sequence - C.intestinalis:627 P.pallidum:627

F6QH36              	100.00%		D3B1R9              	100.00%
Bootstrap support for F6QH36 as seed ortholog is 100%.
Bootstrap support for D3B1R9 as seed ortholog is 100%.

Group of orthologs #140. Best score 626 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 P.pallidum:304

F7BA18              	100.00%		D3BB39              	100.00%
Bootstrap support for F7BA18 as seed ortholog is 100%.
Bootstrap support for D3BB39 as seed ortholog is 100%.

Group of orthologs #141. Best score 626 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 P.pallidum:436

H2XS20              	100.00%		D3B6E1              	100.00%
Bootstrap support for H2XS20 as seed ortholog is 100%.
Bootstrap support for D3B6E1 as seed ortholog is 100%.

Group of orthologs #142. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 P.pallidum:233

F6YUT1              	100.00%		D3B8Z2              	100.00%
                    	       		D3BQ49              	16.46%
                    	       		D3BLZ8              	7.30%
Bootstrap support for F6YUT1 as seed ortholog is 99%.
Bootstrap support for D3B8Z2 as seed ortholog is 99%.

Group of orthologs #143. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:625 P.pallidum:625

F6PST3              	100.00%		D3AYV1              	100.00%
Bootstrap support for F6PST3 as seed ortholog is 100%.
Bootstrap support for D3AYV1 as seed ortholog is 100%.

Group of orthologs #144. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:621 P.pallidum:621

F6VCT2              	100.00%		D3B7H9              	100.00%
Bootstrap support for F6VCT2 as seed ortholog is 100%.
Bootstrap support for D3B7H9 as seed ortholog is 100%.

Group of orthologs #145. Best score 620 bits
Score difference with first non-orthologous sequence - C.intestinalis:620 P.pallidum:521

F6T957              	100.00%		D3B1H9              	100.00%
Bootstrap support for F6T957 as seed ortholog is 100%.
Bootstrap support for D3B1H9 as seed ortholog is 100%.

Group of orthologs #146. Best score 619 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 P.pallidum:64

F6QFH5              	100.00%		D3BEC9              	100.00%
Bootstrap support for F6QFH5 as seed ortholog is 73%.
Alternative seed ortholog is F6ZF70 (22 bits away from this cluster)
Bootstrap support for D3BEC9 as seed ortholog is 97%.

Group of orthologs #147. Best score 618 bits
Score difference with first non-orthologous sequence - C.intestinalis:618 P.pallidum:618

F6UE02              	100.00%		D3B1F9              	100.00%
Bootstrap support for F6UE02 as seed ortholog is 100%.
Bootstrap support for D3B1F9 as seed ortholog is 100%.

Group of orthologs #148. Best score 618 bits
Score difference with first non-orthologous sequence - C.intestinalis:618 P.pallidum:138

F6Z5E6              	100.00%		D3BMY2              	100.00%
Bootstrap support for F6Z5E6 as seed ortholog is 100%.
Bootstrap support for D3BMY2 as seed ortholog is 99%.

Group of orthologs #149. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 P.pallidum:512

F6SBG8              	100.00%		D3B6R2              	100.00%
Bootstrap support for F6SBG8 as seed ortholog is 100%.
Bootstrap support for D3B6R2 as seed ortholog is 100%.

Group of orthologs #150. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 P.pallidum:616

F6TPR3              	100.00%		D3B434              	100.00%
Bootstrap support for F6TPR3 as seed ortholog is 100%.
Bootstrap support for D3B434 as seed ortholog is 100%.

Group of orthologs #151. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 P.pallidum:616

F6PYU7              	100.00%		D3BFA6              	100.00%
Bootstrap support for F6PYU7 as seed ortholog is 100%.
Bootstrap support for D3BFA6 as seed ortholog is 100%.

Group of orthologs #152. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 P.pallidum:297

F6THL0              	100.00%		D3BRF2              	100.00%
Bootstrap support for F6THL0 as seed ortholog is 100%.
Bootstrap support for D3BRF2 as seed ortholog is 100%.

Group of orthologs #153. Best score 615 bits
Score difference with first non-orthologous sequence - C.intestinalis:615 P.pallidum:615

F7A2X8              	100.00%		D3BJB3              	100.00%
Bootstrap support for F7A2X8 as seed ortholog is 100%.
Bootstrap support for D3BJB3 as seed ortholog is 100%.

Group of orthologs #154. Best score 614 bits
Score difference with first non-orthologous sequence - C.intestinalis:614 P.pallidum:614

H2XKD5              	100.00%		D3B474              	100.00%
Bootstrap support for H2XKD5 as seed ortholog is 100%.
Bootstrap support for D3B474 as seed ortholog is 100%.

Group of orthologs #155. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 P.pallidum:611

F6YTL6              	100.00%		D3B6W8              	100.00%
Bootstrap support for F6YTL6 as seed ortholog is 100%.
Bootstrap support for D3B6W8 as seed ortholog is 100%.

Group of orthologs #156. Best score 610 bits
Score difference with first non-orthologous sequence - C.intestinalis:610 P.pallidum:610

F6PL95              	100.00%		D3BTY9              	100.00%
Bootstrap support for F6PL95 as seed ortholog is 100%.
Bootstrap support for D3BTY9 as seed ortholog is 100%.

Group of orthologs #157. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:608 P.pallidum:489

F6R4B5              	100.00%		D3BUD5              	100.00%
Bootstrap support for F6R4B5 as seed ortholog is 100%.
Bootstrap support for D3BUD5 as seed ortholog is 100%.

Group of orthologs #158. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 P.pallidum:607

F6U2M6              	100.00%		D3AWX0              	100.00%
Bootstrap support for F6U2M6 as seed ortholog is 100%.
Bootstrap support for D3AWX0 as seed ortholog is 100%.

Group of orthologs #159. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 P.pallidum:607

F7BHP4              	100.00%		D3BGX5              	100.00%
Bootstrap support for F7BHP4 as seed ortholog is 100%.
Bootstrap support for D3BGX5 as seed ortholog is 100%.

Group of orthologs #160. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:556 P.pallidum:606

F6T9M1              	100.00%		D3B5U3              	100.00%
Bootstrap support for F6T9M1 as seed ortholog is 100%.
Bootstrap support for D3B5U3 as seed ortholog is 100%.

Group of orthologs #161. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:603 P.pallidum:373

F6S399              	100.00%		D3B344              	100.00%
Bootstrap support for F6S399 as seed ortholog is 100%.
Bootstrap support for D3B344 as seed ortholog is 100%.

Group of orthologs #162. Best score 601 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.pallidum:494

F7B0A1              	100.00%		D3BG27              	100.00%
F6SM91              	30.74%		
F6SDH3              	6.15%		
Bootstrap support for F7B0A1 as seed ortholog is 99%.
Bootstrap support for D3BG27 as seed ortholog is 100%.

Group of orthologs #163. Best score 601 bits
Score difference with first non-orthologous sequence - C.intestinalis:601 P.pallidum:601

F6TKV3              	100.00%		D3BJ15              	100.00%
                    	       		D3B6X4              	9.10%
Bootstrap support for F6TKV3 as seed ortholog is 100%.
Bootstrap support for D3BJ15 as seed ortholog is 100%.

Group of orthologs #164. Best score 599 bits
Score difference with first non-orthologous sequence - C.intestinalis:599 P.pallidum:599

F6SXA4              	100.00%		D3BN72              	100.00%
Bootstrap support for F6SXA4 as seed ortholog is 100%.
Bootstrap support for D3BN72 as seed ortholog is 100%.

Group of orthologs #165. Best score 598 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 P.pallidum:488

F6U0I8              	100.00%		D3AZB8              	100.00%
Bootstrap support for F6U0I8 as seed ortholog is 100%.
Bootstrap support for D3AZB8 as seed ortholog is 100%.

Group of orthologs #166. Best score 597 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 P.pallidum:366

F7AXJ1              	100.00%		D3BFH7              	100.00%
Bootstrap support for F7AXJ1 as seed ortholog is 100%.
Bootstrap support for D3BFH7 as seed ortholog is 100%.

Group of orthologs #167. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 P.pallidum:164

F7BIX8              	100.00%		D3BRF9              	100.00%
Bootstrap support for F7BIX8 as seed ortholog is 68%.
Alternative seed ortholog is F7B7Y1 (38 bits away from this cluster)
Bootstrap support for D3BRF9 as seed ortholog is 85%.

Group of orthologs #168. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:594 P.pallidum:594

F6XKP0              	100.00%		D3BPU8              	100.00%
Bootstrap support for F6XKP0 as seed ortholog is 100%.
Bootstrap support for D3BPU8 as seed ortholog is 100%.

Group of orthologs #169. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:591 P.pallidum:591

F6TDD6              	100.00%		D3BVL5              	100.00%
Bootstrap support for F6TDD6 as seed ortholog is 100%.
Bootstrap support for D3BVL5 as seed ortholog is 100%.

Group of orthologs #170. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:591 P.pallidum:123

F6XJ08              	100.00%		D3BRU6              	100.00%
Bootstrap support for F6XJ08 as seed ortholog is 100%.
Bootstrap support for D3BRU6 as seed ortholog is 99%.

Group of orthologs #171. Best score 590 bits
Score difference with first non-orthologous sequence - C.intestinalis:590 P.pallidum:520

F6ZDC7              	100.00%		D3BII3              	100.00%
Bootstrap support for F6ZDC7 as seed ortholog is 100%.
Bootstrap support for D3BII3 as seed ortholog is 100%.

Group of orthologs #172. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.pallidum:589

F6UTT2              	100.00%		D3BAW3              	100.00%
                    	       		D3B6E9              	49.37%
Bootstrap support for F6UTT2 as seed ortholog is 100%.
Bootstrap support for D3BAW3 as seed ortholog is 100%.

Group of orthologs #173. Best score 588 bits
Score difference with first non-orthologous sequence - C.intestinalis:588 P.pallidum:531

F6WTE3              	100.00%		D3B3I9              	100.00%
Bootstrap support for F6WTE3 as seed ortholog is 100%.
Bootstrap support for D3B3I9 as seed ortholog is 100%.

Group of orthologs #174. Best score 588 bits
Score difference with first non-orthologous sequence - C.intestinalis:588 P.pallidum:588

F6YXI8              	100.00%		D3BN75              	100.00%
Bootstrap support for F6YXI8 as seed ortholog is 100%.
Bootstrap support for D3BN75 as seed ortholog is 100%.

Group of orthologs #175. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 P.pallidum:587

F6XH38              	100.00%		D3AY16              	100.00%
F6ZGX7              	9.92%		
F6ZGZ0              	7.82%		
Bootstrap support for F6XH38 as seed ortholog is 100%.
Bootstrap support for D3AY16 as seed ortholog is 100%.

Group of orthologs #176. Best score 585 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.pallidum:248

F6Y8H4              	100.00%		D3BDW2              	100.00%
                    	       		D3B4Y9              	5.72%
Bootstrap support for F6Y8H4 as seed ortholog is 99%.
Bootstrap support for D3BDW2 as seed ortholog is 100%.

Group of orthologs #177. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.pallidum:515

F6SPK3              	100.00%		D3AVT5              	100.00%
Bootstrap support for F6SPK3 as seed ortholog is 97%.
Bootstrap support for D3AVT5 as seed ortholog is 100%.

Group of orthologs #178. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 P.pallidum:579

F6ZZJ8              	100.00%		D3BAM6              	100.00%
Bootstrap support for F6ZZJ8 as seed ortholog is 100%.
Bootstrap support for D3BAM6 as seed ortholog is 100%.

Group of orthologs #179. Best score 578 bits
Score difference with first non-orthologous sequence - C.intestinalis:578 P.pallidum:578

F6QIX3              	100.00%		D3AWW1              	100.00%
Bootstrap support for F6QIX3 as seed ortholog is 100%.
Bootstrap support for D3AWW1 as seed ortholog is 100%.

Group of orthologs #180. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:577 P.pallidum:577

F6W785              	100.00%		D3BEC2              	100.00%
Bootstrap support for F6W785 as seed ortholog is 100%.
Bootstrap support for D3BEC2 as seed ortholog is 100%.

Group of orthologs #181. Best score 575 bits
Score difference with first non-orthologous sequence - C.intestinalis:575 P.pallidum:575

F6V5U6              	100.00%		D3B5W3              	100.00%
Bootstrap support for F6V5U6 as seed ortholog is 100%.
Bootstrap support for D3B5W3 as seed ortholog is 100%.

Group of orthologs #182. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 P.pallidum:574

F6R9X0              	100.00%		D3BIK5              	100.00%
F7A581              	10.16%		D3BIK6              	26.03%
                    	       		D3B222              	17.38%
Bootstrap support for F6R9X0 as seed ortholog is 100%.
Bootstrap support for D3BIK5 as seed ortholog is 100%.

Group of orthologs #183. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:574 P.pallidum:417

F6Q0U4              	100.00%		D3BK16              	100.00%
Bootstrap support for F6Q0U4 as seed ortholog is 100%.
Bootstrap support for D3BK16 as seed ortholog is 100%.

Group of orthologs #184. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:574 P.pallidum:458

F7AEZ3              	100.00%		D3BPJ2              	100.00%
Bootstrap support for F7AEZ3 as seed ortholog is 100%.
Bootstrap support for D3BPJ2 as seed ortholog is 100%.

Group of orthologs #185. Best score 573 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 P.pallidum:428

F6X2D1              	100.00%		D3BVG6              	100.00%
                    	       		D3AY71              	12.93%
Bootstrap support for F6X2D1 as seed ortholog is 100%.
Bootstrap support for D3BVG6 as seed ortholog is 100%.

Group of orthologs #186. Best score 573 bits
Score difference with first non-orthologous sequence - C.intestinalis:573 P.pallidum:573

F6Y025              	100.00%		D3BC51              	100.00%
Bootstrap support for F6Y025 as seed ortholog is 100%.
Bootstrap support for D3BC51 as seed ortholog is 100%.

Group of orthologs #187. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 P.pallidum:458

F6YDF4              	100.00%		D3BP41              	100.00%
Bootstrap support for F6YDF4 as seed ortholog is 100%.
Bootstrap support for D3BP41 as seed ortholog is 100%.

Group of orthologs #188. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:567 P.pallidum:377

F6VEU9              	100.00%		D3B3K7              	100.00%
Bootstrap support for F6VEU9 as seed ortholog is 100%.
Bootstrap support for D3B3K7 as seed ortholog is 100%.

Group of orthologs #189. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 P.pallidum:566

H2XJF2              	100.00%		D3BPC8              	100.00%
Bootstrap support for H2XJF2 as seed ortholog is 100%.
Bootstrap support for D3BPC8 as seed ortholog is 100%.

Group of orthologs #190. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:564 P.pallidum:564

F6Z3U3              	100.00%		D3BBR7              	100.00%
Bootstrap support for F6Z3U3 as seed ortholog is 100%.
Bootstrap support for D3BBR7 as seed ortholog is 100%.

Group of orthologs #191. Best score 563 bits
Score difference with first non-orthologous sequence - C.intestinalis:563 P.pallidum:196

F7AK99              	100.00%		D3BKM7              	100.00%
Bootstrap support for F7AK99 as seed ortholog is 100%.
Bootstrap support for D3BKM7 as seed ortholog is 99%.

Group of orthologs #192. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 P.pallidum:562

F6XZ93              	100.00%		D3BP87              	100.00%
                    	       		D3BH75              	31.77%
Bootstrap support for F6XZ93 as seed ortholog is 100%.
Bootstrap support for D3BP87 as seed ortholog is 100%.

Group of orthologs #193. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 P.pallidum:475

H2XSX9              	100.00%		D3BP51              	100.00%
H2XZ08              	59.18%		
F6ZIF2              	52.33%		
F6ZID9              	49.59%		
Bootstrap support for H2XSX9 as seed ortholog is 100%.
Bootstrap support for D3BP51 as seed ortholog is 100%.

Group of orthologs #194. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 P.pallidum:390

F6RIY5              	100.00%		D3B5X2              	100.00%
Bootstrap support for F6RIY5 as seed ortholog is 100%.
Bootstrap support for D3B5X2 as seed ortholog is 100%.

Group of orthologs #195. Best score 551 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 P.pallidum:395

H2XYB0              	100.00%		D3B7D2              	100.00%
Bootstrap support for H2XYB0 as seed ortholog is 99%.
Bootstrap support for D3B7D2 as seed ortholog is 100%.

Group of orthologs #196. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 P.pallidum:549

F6PNS6              	100.00%		D3B427              	100.00%
Bootstrap support for F6PNS6 as seed ortholog is 100%.
Bootstrap support for D3B427 as seed ortholog is 100%.

Group of orthologs #197. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 P.pallidum:549

F6RK88              	100.00%		D3B268              	100.00%
Bootstrap support for F6RK88 as seed ortholog is 100%.
Bootstrap support for D3B268 as seed ortholog is 100%.

Group of orthologs #198. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 P.pallidum:549

F6UWX3              	100.00%		D3BHQ7              	100.00%
Bootstrap support for F6UWX3 as seed ortholog is 100%.
Bootstrap support for D3BHQ7 as seed ortholog is 100%.

Group of orthologs #199. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 P.pallidum:161

F6VAS2              	100.00%		D3BKP8              	100.00%
Bootstrap support for F6VAS2 as seed ortholog is 100%.
Bootstrap support for D3BKP8 as seed ortholog is 100%.

Group of orthologs #200. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 P.pallidum:466

F6Z3I0              	100.00%		D3BQU1              	100.00%
Bootstrap support for F6Z3I0 as seed ortholog is 100%.
Bootstrap support for D3BQU1 as seed ortholog is 100%.

Group of orthologs #201. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:546 P.pallidum:546

H2XKW2              	100.00%		D3BAK5              	100.00%
Bootstrap support for H2XKW2 as seed ortholog is 100%.
Bootstrap support for D3BAK5 as seed ortholog is 100%.

Group of orthologs #202. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 P.pallidum:332

F7A1V5              	100.00%		D3BEH4              	100.00%
Bootstrap support for F7A1V5 as seed ortholog is 100%.
Bootstrap support for D3BEH4 as seed ortholog is 100%.

Group of orthologs #203. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 P.pallidum:434

F7AMH0              	100.00%		D3B3C8              	100.00%
Bootstrap support for F7AMH0 as seed ortholog is 100%.
Bootstrap support for D3B3C8 as seed ortholog is 100%.

Group of orthologs #204. Best score 542 bits
Score difference with first non-orthologous sequence - C.intestinalis:542 P.pallidum:542

F6TTZ5              	100.00%		D3BR30              	100.00%
Bootstrap support for F6TTZ5 as seed ortholog is 100%.
Bootstrap support for D3BR30 as seed ortholog is 100%.

Group of orthologs #205. Best score 542 bits
Score difference with first non-orthologous sequence - C.intestinalis:542 P.pallidum:346

Q1RPW7              	100.00%		D3BA83              	100.00%
Bootstrap support for Q1RPW7 as seed ortholog is 100%.
Bootstrap support for D3BA83 as seed ortholog is 100%.

Group of orthologs #206. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 P.pallidum:541

F6RAB3              	100.00%		D3AZM1              	100.00%
Bootstrap support for F6RAB3 as seed ortholog is 62%.
Alternative seed ortholog is F6YDI9 (9 bits away from this cluster)
Bootstrap support for D3AZM1 as seed ortholog is 100%.

Group of orthologs #207. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 P.pallidum:45

F6UE33              	100.00%		D3BIH4              	100.00%
Bootstrap support for F6UE33 as seed ortholog is 100%.
Bootstrap support for D3BIH4 as seed ortholog is 82%.

Group of orthologs #208. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 P.pallidum:236

F6RKM9              	100.00%		D3BV25              	100.00%
Bootstrap support for F6RKM9 as seed ortholog is 99%.
Bootstrap support for D3BV25 as seed ortholog is 99%.

Group of orthologs #209. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 P.pallidum:540

F6ZJZ6              	100.00%		D3BU59              	100.00%
Bootstrap support for F6ZJZ6 as seed ortholog is 100%.
Bootstrap support for D3BU59 as seed ortholog is 100%.

Group of orthologs #210. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 P.pallidum:274

F6Y1K6              	100.00%		D3BBY9              	100.00%
F6Q5E4              	72.85%		
Bootstrap support for F6Y1K6 as seed ortholog is 100%.
Bootstrap support for D3BBY9 as seed ortholog is 100%.

Group of orthologs #211. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 P.pallidum:295

F6TGH1              	100.00%		D3BQP4              	100.00%
Bootstrap support for F6TGH1 as seed ortholog is 100%.
Bootstrap support for D3BQP4 as seed ortholog is 100%.

Group of orthologs #212. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 P.pallidum:536

F6RK00              	100.00%		D3BTZ2              	100.00%
Bootstrap support for F6RK00 as seed ortholog is 100%.
Bootstrap support for D3BTZ2 as seed ortholog is 100%.

Group of orthologs #213. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 P.pallidum:536

F6ZWW6              	100.00%		D3BFI2              	100.00%
Bootstrap support for F6ZWW6 as seed ortholog is 100%.
Bootstrap support for D3BFI2 as seed ortholog is 100%.

Group of orthologs #214. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 P.pallidum:535

F6WAZ5              	100.00%		D3AY94              	100.00%
Bootstrap support for F6WAZ5 as seed ortholog is 100%.
Bootstrap support for D3AY94 as seed ortholog is 100%.

Group of orthologs #215. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 P.pallidum:535

F6YND1              	100.00%		D3BGD9              	100.00%
Bootstrap support for F6YND1 as seed ortholog is 100%.
Bootstrap support for D3BGD9 as seed ortholog is 100%.

Group of orthologs #216. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 P.pallidum:534

F6W1L1              	100.00%		D3BE82              	100.00%
Bootstrap support for F6W1L1 as seed ortholog is 100%.
Bootstrap support for D3BE82 as seed ortholog is 100%.

Group of orthologs #217. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 P.pallidum:484

F6VRH3              	100.00%		D3BQX1              	100.00%
Bootstrap support for F6VRH3 as seed ortholog is 100%.
Bootstrap support for D3BQX1 as seed ortholog is 100%.

Group of orthologs #218. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 P.pallidum:387

F6ZC49              	100.00%		D3B2K0              	100.00%
Bootstrap support for F6ZC49 as seed ortholog is 100%.
Bootstrap support for D3B2K0 as seed ortholog is 100%.

Group of orthologs #219. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 P.pallidum:358

F6W8K8              	100.00%		D3BET6              	100.00%
Bootstrap support for F6W8K8 as seed ortholog is 100%.
Bootstrap support for D3BET6 as seed ortholog is 100%.

Group of orthologs #220. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 P.pallidum:299

F6Z194              	100.00%		D3BNB9              	100.00%
Bootstrap support for F6Z194 as seed ortholog is 100%.
Bootstrap support for D3BNB9 as seed ortholog is 100%.

Group of orthologs #221. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 P.pallidum:316

F6UCG0              	100.00%		D3AYZ6              	100.00%
Bootstrap support for F6UCG0 as seed ortholog is 100%.
Bootstrap support for D3AYZ6 as seed ortholog is 100%.

Group of orthologs #222. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 P.pallidum:528

F6YNG6              	100.00%		D3AZB0              	100.00%
Bootstrap support for F6YNG6 as seed ortholog is 100%.
Bootstrap support for D3AZB0 as seed ortholog is 100%.

Group of orthologs #223. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 P.pallidum:446

H2XSM0              	100.00%		D3BP61              	100.00%
Bootstrap support for H2XSM0 as seed ortholog is 100%.
Bootstrap support for D3BP61 as seed ortholog is 100%.

Group of orthologs #224. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:526 P.pallidum:453

F6UQ90              	100.00%		D3BC91              	100.00%
Bootstrap support for F6UQ90 as seed ortholog is 100%.
Bootstrap support for D3BC91 as seed ortholog is 100%.

Group of orthologs #225. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:526 P.pallidum:526

F6QK56              	100.00%		D3BQY2              	100.00%
Bootstrap support for F6QK56 as seed ortholog is 100%.
Bootstrap support for D3BQY2 as seed ortholog is 100%.

Group of orthologs #226. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 P.pallidum:229

F6SI15              	100.00%		D3BBF7              	100.00%
Bootstrap support for F6SI15 as seed ortholog is 100%.
Bootstrap support for D3BBF7 as seed ortholog is 99%.

Group of orthologs #227. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 P.pallidum:524

F6UF57              	100.00%		D3B4I5              	100.00%
Bootstrap support for F6UF57 as seed ortholog is 100%.
Bootstrap support for D3B4I5 as seed ortholog is 100%.

Group of orthologs #228. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.pallidum:292

H2XSE7              	100.00%		D3BRC2              	100.00%
F6W5P6              	16.39%		
F6W6R6              	14.52%		
F6Z7V5              	7.88%		
Bootstrap support for H2XSE7 as seed ortholog is 91%.
Bootstrap support for D3BRC2 as seed ortholog is 100%.

Group of orthologs #229. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 P.pallidum:522

F6Y5C7              	100.00%		D3B6E7              	100.00%
Bootstrap support for F6Y5C7 as seed ortholog is 100%.
Bootstrap support for D3B6E7 as seed ortholog is 100%.

Group of orthologs #230. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 P.pallidum:522

F7ADU2              	100.00%		D3B8G9              	100.00%
Bootstrap support for F7ADU2 as seed ortholog is 100%.
Bootstrap support for D3B8G9 as seed ortholog is 100%.

Group of orthologs #231. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 P.pallidum:518

F6XK10              	100.00%		D3BE62              	100.00%
Bootstrap support for F6XK10 as seed ortholog is 100%.
Bootstrap support for D3BE62 as seed ortholog is 100%.

Group of orthologs #232. Best score 516 bits
Score difference with first non-orthologous sequence - C.intestinalis:516 P.pallidum:516

F6S6E8              	100.00%		D3BB47              	100.00%
Bootstrap support for F6S6E8 as seed ortholog is 100%.
Bootstrap support for D3BB47 as seed ortholog is 100%.

Group of orthologs #233. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 P.pallidum:515

F6W0L1              	100.00%		D3AZP8              	100.00%
Bootstrap support for F6W0L1 as seed ortholog is 100%.
Bootstrap support for D3AZP8 as seed ortholog is 100%.

Group of orthologs #234. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 P.pallidum:515

F7B7H5              	100.00%		D3B731              	100.00%
Bootstrap support for F7B7H5 as seed ortholog is 100%.
Bootstrap support for D3B731 as seed ortholog is 100%.

Group of orthologs #235. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 P.pallidum:399

F6SG33              	100.00%		D3BT28              	100.00%
Bootstrap support for F6SG33 as seed ortholog is 100%.
Bootstrap support for D3BT28 as seed ortholog is 100%.

Group of orthologs #236. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 P.pallidum:514

F7B580              	100.00%		D3BMN8              	100.00%
Bootstrap support for F7B580 as seed ortholog is 100%.
Bootstrap support for D3BMN8 as seed ortholog is 100%.

Group of orthologs #237. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:513 P.pallidum:513

H2XJF4              	100.00%		D3B2S5              	100.00%
                    	       		D3BUR5              	36.21%
Bootstrap support for H2XJF4 as seed ortholog is 100%.
Bootstrap support for D3B2S5 as seed ortholog is 100%.

Group of orthologs #238. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:513 P.pallidum:513

Q1RLG4              	100.00%		D3BKG1              	100.00%
Bootstrap support for Q1RLG4 as seed ortholog is 100%.
Bootstrap support for D3BKG1 as seed ortholog is 100%.

Group of orthologs #239. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 P.pallidum:512

F6W790              	100.00%		D3BPB4              	100.00%
Bootstrap support for F6W790 as seed ortholog is 100%.
Bootstrap support for D3BPB4 as seed ortholog is 100%.

Group of orthologs #240. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:511 P.pallidum:227

F7AYB9              	100.00%		D3BEH3              	100.00%
Bootstrap support for F7AYB9 as seed ortholog is 100%.
Bootstrap support for D3BEH3 as seed ortholog is 99%.

Group of orthologs #241. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 P.pallidum:441

F6X0I3              	100.00%		D3B4F3              	100.00%
Bootstrap support for F6X0I3 as seed ortholog is 100%.
Bootstrap support for D3B4F3 as seed ortholog is 100%.

Group of orthologs #242. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 P.pallidum:375

H2XK60              	100.00%		D3BJP0              	100.00%
Bootstrap support for H2XK60 as seed ortholog is 100%.
Bootstrap support for D3BJP0 as seed ortholog is 100%.

Group of orthologs #243. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 P.pallidum:508

F6TM52              	100.00%		D3BV41              	100.00%
Bootstrap support for F6TM52 as seed ortholog is 100%.
Bootstrap support for D3BV41 as seed ortholog is 100%.

Group of orthologs #244. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 P.pallidum:507

F6U113              	100.00%		D3AVW9              	100.00%
Bootstrap support for F6U113 as seed ortholog is 99%.
Bootstrap support for D3AVW9 as seed ortholog is 100%.

Group of orthologs #245. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 P.pallidum:507

F6VVR6              	100.00%		D3BNT7              	100.00%
Bootstrap support for F6VVR6 as seed ortholog is 100%.
Bootstrap support for D3BNT7 as seed ortholog is 100%.

Group of orthologs #246. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 P.pallidum:439

H2XNV5              	100.00%		D3B7E5              	100.00%
Bootstrap support for H2XNV5 as seed ortholog is 100%.
Bootstrap support for D3B7E5 as seed ortholog is 100%.

Group of orthologs #247. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 P.pallidum:507

F6YKX8              	100.00%		D3BK20              	100.00%
Bootstrap support for F6YKX8 as seed ortholog is 100%.
Bootstrap support for D3BK20 as seed ortholog is 100%.

Group of orthologs #248. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 P.pallidum:505

H2XKN0              	100.00%		D3BAC0              	100.00%
Bootstrap support for H2XKN0 as seed ortholog is 100%.
Bootstrap support for D3BAC0 as seed ortholog is 100%.

Group of orthologs #249. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 P.pallidum:503

F6ZBB5              	100.00%		D3B8W3              	100.00%
Bootstrap support for F6ZBB5 as seed ortholog is 100%.
Bootstrap support for D3B8W3 as seed ortholog is 100%.

Group of orthologs #250. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 P.pallidum:502

F7BQ94              	100.00%		D3AYC8              	100.00%
Bootstrap support for F7BQ94 as seed ortholog is 100%.
Bootstrap support for D3AYC8 as seed ortholog is 100%.

Group of orthologs #251. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.pallidum:43

F6VP00              	100.00%		D3BM30              	100.00%
                    	       		D3AYR9              	9.24%
Bootstrap support for F6VP00 as seed ortholog is 86%.
Bootstrap support for D3BM30 as seed ortholog is 73%.
Alternative seed ortholog is D3BKE2 (43 bits away from this cluster)

Group of orthologs #252. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.pallidum:501

F6PMK8              	100.00%		D3B0J2              	100.00%
Bootstrap support for F6PMK8 as seed ortholog is 84%.
Bootstrap support for D3B0J2 as seed ortholog is 100%.

Group of orthologs #253. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 P.pallidum:333

F7AA42              	100.00%		D3BK58              	100.00%
Bootstrap support for F7AA42 as seed ortholog is 100%.
Bootstrap support for D3BK58 as seed ortholog is 100%.

Group of orthologs #254. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 P.pallidum:500

F6RNS7              	100.00%		D3AZ75              	100.00%
Bootstrap support for F6RNS7 as seed ortholog is 100%.
Bootstrap support for D3AZ75 as seed ortholog is 100%.

Group of orthologs #255. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 P.pallidum:397

F6ZY44              	100.00%		D3B6G4              	100.00%
Bootstrap support for F6ZY44 as seed ortholog is 100%.
Bootstrap support for D3B6G4 as seed ortholog is 100%.

Group of orthologs #256. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 P.pallidum:50

H2Y3E5              	100.00%		D3AW22              	100.00%
                    	       		D3B337              	8.09%
Bootstrap support for H2Y3E5 as seed ortholog is 100%.
Bootstrap support for D3AW22 as seed ortholog is 70%.
Alternative seed ortholog is D3B6Y6 (50 bits away from this cluster)

Group of orthologs #257. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 P.pallidum:498

F6YIL9              	100.00%		D3AVV8              	100.00%
Bootstrap support for F6YIL9 as seed ortholog is 100%.
Bootstrap support for D3AVV8 as seed ortholog is 100%.

Group of orthologs #258. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.pallidum:239

F6UHH9              	100.00%		D3BB29              	100.00%
Bootstrap support for F6UHH9 as seed ortholog is 99%.
Bootstrap support for D3BB29 as seed ortholog is 100%.

Group of orthologs #259. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 P.pallidum:497

H2XWW7              	100.00%		D3BF55              	100.00%
Bootstrap support for H2XWW7 as seed ortholog is 100%.
Bootstrap support for D3BF55 as seed ortholog is 100%.

Group of orthologs #260. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.pallidum:422

F7AW67              	100.00%		D3BQ34              	100.00%
Bootstrap support for F7AW67 as seed ortholog is 100%.
Bootstrap support for D3BQ34 as seed ortholog is 100%.

Group of orthologs #261. Best score 494 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 P.pallidum:143

H2XLI5              	100.00%		D3B2M8              	100.00%
H2XK85              	50.68%		
Bootstrap support for H2XLI5 as seed ortholog is 100%.
Bootstrap support for D3B2M8 as seed ortholog is 100%.

Group of orthologs #262. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 P.pallidum:493

F6TZ29              	100.00%		D3B298              	100.00%
Bootstrap support for F6TZ29 as seed ortholog is 100%.
Bootstrap support for D3B298 as seed ortholog is 100%.

Group of orthologs #263. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 P.pallidum:492

F6U609              	100.00%		D3AY91              	100.00%
Bootstrap support for F6U609 as seed ortholog is 100%.
Bootstrap support for D3AY91 as seed ortholog is 100%.

Group of orthologs #264. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.pallidum:220

F6RHH3              	100.00%		D3BBC2              	100.00%
Bootstrap support for F6RHH3 as seed ortholog is 75%.
Bootstrap support for D3BBC2 as seed ortholog is 99%.

Group of orthologs #265. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 P.pallidum:491

F7AX62              	100.00%		D3BB07              	100.00%
Bootstrap support for F7AX62 as seed ortholog is 100%.
Bootstrap support for D3BB07 as seed ortholog is 100%.

Group of orthologs #266. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 P.pallidum:491

F7BQ30              	100.00%		D3BLY9              	100.00%
Bootstrap support for F7BQ30 as seed ortholog is 100%.
Bootstrap support for D3BLY9 as seed ortholog is 100%.

Group of orthologs #267. Best score 490 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 P.pallidum:436

F6WWW4              	100.00%		D3BGA4              	100.00%
Bootstrap support for F6WWW4 as seed ortholog is 100%.
Bootstrap support for D3BGA4 as seed ortholog is 100%.

Group of orthologs #268. Best score 490 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 P.pallidum:294

F6UGA6              	100.00%		D3BRA7              	100.00%
Bootstrap support for F6UGA6 as seed ortholog is 99%.
Bootstrap support for D3BRA7 as seed ortholog is 100%.

Group of orthologs #269. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 P.pallidum:114

F7B991              	100.00%		D3BLI7              	100.00%
Bootstrap support for F7B991 as seed ortholog is 100%.
Bootstrap support for D3BLI7 as seed ortholog is 99%.

Group of orthologs #270. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 P.pallidum:488

F6V136              	100.00%		D3BH79              	100.00%
Bootstrap support for F6V136 as seed ortholog is 100%.
Bootstrap support for D3BH79 as seed ortholog is 100%.

Group of orthologs #271. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 P.pallidum:488

F7AFD2              	100.00%		D3B6C8              	100.00%
Bootstrap support for F7AFD2 as seed ortholog is 100%.
Bootstrap support for D3B6C8 as seed ortholog is 100%.

Group of orthologs #272. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.pallidum:107

H2XPB4              	100.00%		D3AZ87              	100.00%
Bootstrap support for H2XPB4 as seed ortholog is 99%.
Bootstrap support for D3AZ87 as seed ortholog is 99%.

Group of orthologs #273. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 P.pallidum:294

H2Y3E7              	100.00%		D3B2V3              	100.00%
Bootstrap support for H2Y3E7 as seed ortholog is 100%.
Bootstrap support for D3B2V3 as seed ortholog is 100%.

Group of orthologs #274. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 P.pallidum:488

Q1RPU5              	100.00%		D3BFW7              	100.00%
Bootstrap support for Q1RPU5 as seed ortholog is 100%.
Bootstrap support for D3BFW7 as seed ortholog is 100%.

Group of orthologs #275. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 P.pallidum:263

F6TMJ9              	100.00%		D3BMB3              	100.00%
F6XF93              	10.30%		
Bootstrap support for F6TMJ9 as seed ortholog is 100%.
Bootstrap support for D3BMB3 as seed ortholog is 100%.

Group of orthologs #276. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 P.pallidum:487

F6YIU2              	100.00%		D3BUT9              	100.00%
Bootstrap support for F6YIU2 as seed ortholog is 100%.
Bootstrap support for D3BUT9 as seed ortholog is 100%.

Group of orthologs #277. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 P.pallidum:486

F6VBU5              	100.00%		D3BBV3              	100.00%
Bootstrap support for F6VBU5 as seed ortholog is 100%.
Bootstrap support for D3BBV3 as seed ortholog is 100%.

Group of orthologs #278. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 P.pallidum:383

H2XU13              	100.00%		D3B4P1              	100.00%
Bootstrap support for H2XU13 as seed ortholog is 100%.
Bootstrap support for D3B4P1 as seed ortholog is 100%.

Group of orthologs #279. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 P.pallidum:305

H2XJZ4              	100.00%		D3BK57              	100.00%
Bootstrap support for H2XJZ4 as seed ortholog is 100%.
Bootstrap support for D3BK57 as seed ortholog is 100%.

Group of orthologs #280. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 P.pallidum:485

F6WUJ1              	100.00%		D3AYX0              	100.00%
Bootstrap support for F6WUJ1 as seed ortholog is 100%.
Bootstrap support for D3AYX0 as seed ortholog is 100%.

Group of orthologs #281. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 P.pallidum:485

F6TGK6              	100.00%		D3B6W0              	100.00%
Bootstrap support for F6TGK6 as seed ortholog is 100%.
Bootstrap support for D3B6W0 as seed ortholog is 100%.

Group of orthologs #282. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 P.pallidum:391

F6W8G0              	100.00%		D3AYY7              	100.00%
Bootstrap support for F6W8G0 as seed ortholog is 100%.
Bootstrap support for D3AYY7 as seed ortholog is 100%.

Group of orthologs #283. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 P.pallidum:482

F7A4H8              	100.00%		D3B6H9              	100.00%
Bootstrap support for F7A4H8 as seed ortholog is 100%.
Bootstrap support for D3B6H9 as seed ortholog is 100%.

Group of orthologs #284. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 P.pallidum:482

H2XXL7              	100.00%		D3BCL2              	100.00%
Bootstrap support for H2XXL7 as seed ortholog is 100%.
Bootstrap support for D3BCL2 as seed ortholog is 100%.

Group of orthologs #285. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 P.pallidum:482

Q1RL58              	100.00%		D3BJT1              	100.00%
Bootstrap support for Q1RL58 as seed ortholog is 100%.
Bootstrap support for D3BJT1 as seed ortholog is 100%.

Group of orthologs #286. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 P.pallidum:480

F6QDE3              	100.00%		D3B350              	100.00%
Bootstrap support for F6QDE3 as seed ortholog is 100%.
Bootstrap support for D3B350 as seed ortholog is 100%.

Group of orthologs #287. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 P.pallidum:480

F6XJU3              	100.00%		D3AWL5              	100.00%
Bootstrap support for F6XJU3 as seed ortholog is 100%.
Bootstrap support for D3AWL5 as seed ortholog is 100%.

Group of orthologs #288. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 P.pallidum:479

F6T4Y7              	100.00%		D3BMA5              	100.00%
Bootstrap support for F6T4Y7 as seed ortholog is 100%.
Bootstrap support for D3BMA5 as seed ortholog is 100%.

Group of orthologs #289. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 P.pallidum:479

F6ZBA8              	100.00%		D3BID1              	100.00%
Bootstrap support for F6ZBA8 as seed ortholog is 100%.
Bootstrap support for D3BID1 as seed ortholog is 100%.

Group of orthologs #290. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 P.pallidum:477

F6WYI9              	100.00%		D3B7Y2              	100.00%
Bootstrap support for F6WYI9 as seed ortholog is 100%.
Bootstrap support for D3B7Y2 as seed ortholog is 100%.

Group of orthologs #291. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 P.pallidum:477

F6QI37              	100.00%		D3BMS6              	100.00%
Bootstrap support for F6QI37 as seed ortholog is 100%.
Bootstrap support for D3BMS6 as seed ortholog is 100%.

Group of orthologs #292. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 P.pallidum:477

F6WKD5              	100.00%		D3BJ28              	100.00%
Bootstrap support for F6WKD5 as seed ortholog is 100%.
Bootstrap support for D3BJ28 as seed ortholog is 100%.

Group of orthologs #293. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 P.pallidum:476

F6QB99              	100.00%		D3B9J3              	100.00%
Bootstrap support for F6QB99 as seed ortholog is 100%.
Bootstrap support for D3B9J3 as seed ortholog is 100%.

Group of orthologs #294. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 P.pallidum:476

F7A7C3              	100.00%		D3BM07              	100.00%
Bootstrap support for F7A7C3 as seed ortholog is 100%.
Bootstrap support for D3BM07 as seed ortholog is 100%.

Group of orthologs #295. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 P.pallidum:337

Q8T3S5              	100.00%		D3B471              	100.00%
Bootstrap support for Q8T3S5 as seed ortholog is 100%.
Bootstrap support for D3B471 as seed ortholog is 100%.

Group of orthologs #296. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 P.pallidum:473

F6TD07              	100.00%		D3AXR9              	100.00%
Bootstrap support for F6TD07 as seed ortholog is 100%.
Bootstrap support for D3AXR9 as seed ortholog is 100%.

Group of orthologs #297. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 P.pallidum:470

F6Q8D1              	100.00%		D3BDL9              	100.00%
                    	       		D3BUG8              	12.86%
Bootstrap support for F6Q8D1 as seed ortholog is 100%.
Bootstrap support for D3BDL9 as seed ortholog is 100%.

Group of orthologs #298. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 P.pallidum:199

F7AVY6              	100.00%		D3AVH5              	100.00%
Bootstrap support for F7AVY6 as seed ortholog is 100%.
Bootstrap support for D3AVH5 as seed ortholog is 99%.

Group of orthologs #299. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.pallidum:319

F6W8M0              	100.00%		D3BQ35              	100.00%
Bootstrap support for F6W8M0 as seed ortholog is 99%.
Bootstrap support for D3BQ35 as seed ortholog is 100%.

Group of orthologs #300. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.pallidum:258

F6WI66              	100.00%		D3BSG3              	100.00%
Bootstrap support for F6WI66 as seed ortholog is 99%.
Bootstrap support for D3BSG3 as seed ortholog is 100%.

Group of orthologs #301. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.pallidum:469

F6WF19              	100.00%		D3BCI5              	100.00%
Bootstrap support for F6WF19 as seed ortholog is 92%.
Bootstrap support for D3BCI5 as seed ortholog is 100%.

Group of orthologs #302. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 P.pallidum:468

H2XWZ3              	100.00%		D3AZ34              	100.00%
Bootstrap support for H2XWZ3 as seed ortholog is 100%.
Bootstrap support for D3AZ34 as seed ortholog is 100%.

Group of orthologs #303. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 P.pallidum:467

F6XL66              	100.00%		D3B1P9              	100.00%
Bootstrap support for F6XL66 as seed ortholog is 100%.
Bootstrap support for D3B1P9 as seed ortholog is 100%.

Group of orthologs #304. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 P.pallidum:467

F6UF05              	100.00%		D3BCX3              	100.00%
Bootstrap support for F6UF05 as seed ortholog is 100%.
Bootstrap support for D3BCX3 as seed ortholog is 100%.

Group of orthologs #305. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 P.pallidum:467

F6YQ60              	100.00%		D3BB96              	100.00%
Bootstrap support for F6YQ60 as seed ortholog is 100%.
Bootstrap support for D3BB96 as seed ortholog is 100%.

Group of orthologs #306. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 P.pallidum:466

F6WLA0              	100.00%		D3BG72              	100.00%
Bootstrap support for F6WLA0 as seed ortholog is 100%.
Bootstrap support for D3BG72 as seed ortholog is 100%.

Group of orthologs #307. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 P.pallidum:315

F6SGJ4              	100.00%		D3BQM9              	100.00%
Bootstrap support for F6SGJ4 as seed ortholog is 100%.
Bootstrap support for D3BQM9 as seed ortholog is 100%.

Group of orthologs #308. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 P.pallidum:465

F6XIQ9              	100.00%		D3BTH8              	100.00%
Bootstrap support for F6XIQ9 as seed ortholog is 100%.
Bootstrap support for D3BTH8 as seed ortholog is 100%.

Group of orthologs #309. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 P.pallidum:464

F6PLF9              	100.00%		D3BF26              	100.00%
F7A4H3              	31.71%		D3B1X4              	30.97%
F6PZN0              	11.63%		D3AX79              	28.36%
F6U2Q6              	9.57%		D3AWH0              	18.28%
                    	       		D3AWU7              	14.55%
Bootstrap support for F6PLF9 as seed ortholog is 100%.
Bootstrap support for D3BF26 as seed ortholog is 100%.

Group of orthologs #310. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 P.pallidum:464

H2XQE4              	100.00%		D3AXJ0              	100.00%
Bootstrap support for H2XQE4 as seed ortholog is 100%.
Bootstrap support for D3AXJ0 as seed ortholog is 100%.

Group of orthologs #311. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 P.pallidum:237

F6Q106              	100.00%		D3BPU6              	100.00%
Bootstrap support for F6Q106 as seed ortholog is 100%.
Bootstrap support for D3BPU6 as seed ortholog is 100%.

Group of orthologs #312. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 P.pallidum:463

F6ZGD4              	100.00%		D3BPC0              	100.00%
Bootstrap support for F6ZGD4 as seed ortholog is 100%.
Bootstrap support for D3BPC0 as seed ortholog is 100%.

Group of orthologs #313. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 P.pallidum:463

F7A9V2              	100.00%		D3BN16              	100.00%
Bootstrap support for F7A9V2 as seed ortholog is 100%.
Bootstrap support for D3BN16 as seed ortholog is 100%.

Group of orthologs #314. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 P.pallidum:463

H2Y1C4              	100.00%		D3B6X8              	100.00%
Bootstrap support for H2Y1C4 as seed ortholog is 100%.
Bootstrap support for D3B6X8 as seed ortholog is 100%.

Group of orthologs #315. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 P.pallidum:463

H2XXZ7              	100.00%		D3BV45              	100.00%
Bootstrap support for H2XXZ7 as seed ortholog is 100%.
Bootstrap support for D3BV45 as seed ortholog is 100%.

Group of orthologs #316. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 P.pallidum:462

F6YNT4              	100.00%		D3BC07              	100.00%
Bootstrap support for F6YNT4 as seed ortholog is 100%.
Bootstrap support for D3BC07 as seed ortholog is 100%.

Group of orthologs #317. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 P.pallidum:460

F6Z3S5              	100.00%		D3BB71              	100.00%
Bootstrap support for F6Z3S5 as seed ortholog is 100%.
Bootstrap support for D3BB71 as seed ortholog is 100%.

Group of orthologs #318. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 P.pallidum:460

H2XNB1              	100.00%		D3B1M1              	100.00%
Bootstrap support for H2XNB1 as seed ortholog is 100%.
Bootstrap support for D3B1M1 as seed ortholog is 100%.

Group of orthologs #319. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.pallidum:401

F6SDI7              	100.00%		D3BDA3              	100.00%
Bootstrap support for F6SDI7 as seed ortholog is 99%.
Bootstrap support for D3BDA3 as seed ortholog is 100%.

Group of orthologs #320. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 P.pallidum:458

F6WQG9              	100.00%		D3BD87              	100.00%
Bootstrap support for F6WQG9 as seed ortholog is 100%.
Bootstrap support for D3BD87 as seed ortholog is 100%.

Group of orthologs #321. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 P.pallidum:457

F6W453              	100.00%		D3B6X9              	100.00%
Bootstrap support for F6W453 as seed ortholog is 100%.
Bootstrap support for D3B6X9 as seed ortholog is 100%.

Group of orthologs #322. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 P.pallidum:457

F7A8S2              	100.00%		D3B6P0              	100.00%
Bootstrap support for F7A8S2 as seed ortholog is 100%.
Bootstrap support for D3B6P0 as seed ortholog is 100%.

Group of orthologs #323. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 P.pallidum:225

H2XYB3              	100.00%		D3AVP3              	100.00%
Bootstrap support for H2XYB3 as seed ortholog is 100%.
Bootstrap support for D3AVP3 as seed ortholog is 100%.

Group of orthologs #324. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 P.pallidum:455

F6WUM1              	100.00%		D3B3T8              	100.00%
Bootstrap support for F6WUM1 as seed ortholog is 100%.
Bootstrap support for D3B3T8 as seed ortholog is 100%.

Group of orthologs #325. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 P.pallidum:453

F6QLM7              	100.00%		D3B6R8              	100.00%
Bootstrap support for F6QLM7 as seed ortholog is 100%.
Bootstrap support for D3B6R8 as seed ortholog is 100%.

Group of orthologs #326. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 P.pallidum:233

H2XQT6              	100.00%		D3B4X1              	100.00%
Bootstrap support for H2XQT6 as seed ortholog is 100%.
Bootstrap support for D3B4X1 as seed ortholog is 100%.

Group of orthologs #327. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 P.pallidum:359

F7A5V7              	100.00%		D3AVR8              	100.00%
Bootstrap support for F7A5V7 as seed ortholog is 100%.
Bootstrap support for D3AVR8 as seed ortholog is 100%.

Group of orthologs #328. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:452 P.pallidum:452

H2XZT6              	100.00%		D3BMN0              	100.00%
Bootstrap support for H2XZT6 as seed ortholog is 100%.
Bootstrap support for D3BMN0 as seed ortholog is 100%.

Group of orthologs #329. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 P.pallidum:241

F6SZU4              	100.00%		D3AZ71              	100.00%
F6T060              	100.00%		D3B2D6              	100.00%
Bootstrap support for F6SZU4 as seed ortholog is 100%.
Bootstrap support for F6T060 as seed ortholog is 100%.
Bootstrap support for D3AZ71 as seed ortholog is 100%.
Bootstrap support for D3B2D6 as seed ortholog is 99%.

Group of orthologs #330. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:451 P.pallidum:451

F7APS6              	100.00%		D3BMV1              	100.00%
Bootstrap support for F7APS6 as seed ortholog is 100%.
Bootstrap support for D3BMV1 as seed ortholog is 100%.

Group of orthologs #331. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 P.pallidum:450

F6ZVE7              	100.00%		D3BUM9              	100.00%
                    	       		D3AXQ3              	14.76%
Bootstrap support for F6ZVE7 as seed ortholog is 100%.
Bootstrap support for D3BUM9 as seed ortholog is 100%.

Group of orthologs #332. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 P.pallidum:449

F6U5F1              	100.00%		D3BQ18              	100.00%
Bootstrap support for F6U5F1 as seed ortholog is 100%.
Bootstrap support for D3BQ18 as seed ortholog is 100%.

Group of orthologs #333. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 P.pallidum:448

F6YK29              	100.00%		D3B3G3              	100.00%
Bootstrap support for F6YK29 as seed ortholog is 100%.
Bootstrap support for D3B3G3 as seed ortholog is 100%.

Group of orthologs #334. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 P.pallidum:448

F6QX56              	100.00%		D3BP59              	100.00%
Bootstrap support for F6QX56 as seed ortholog is 100%.
Bootstrap support for D3BP59 as seed ortholog is 100%.

Group of orthologs #335. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 P.pallidum:447

H2Y2K4              	100.00%		D3B588              	100.00%
                    	       		D3BKC2              	11.68%
Bootstrap support for H2Y2K4 as seed ortholog is 100%.
Bootstrap support for D3B588 as seed ortholog is 100%.

Group of orthologs #336. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 P.pallidum:308

F6XQD4              	100.00%		D3BFF8              	100.00%
Bootstrap support for F6XQD4 as seed ortholog is 100%.
Bootstrap support for D3BFF8 as seed ortholog is 100%.

Group of orthologs #337. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 P.pallidum:446

H2XVK2              	100.00%		D3B5Y1              	100.00%
H2XQD5              	57.50%		
Bootstrap support for H2XVK2 as seed ortholog is 100%.
Bootstrap support for D3B5Y1 as seed ortholog is 100%.

Group of orthologs #338. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 P.pallidum:446

F6YX67              	100.00%		D3AWC6              	100.00%
Bootstrap support for F6YX67 as seed ortholog is 100%.
Bootstrap support for D3AWC6 as seed ortholog is 100%.

Group of orthologs #339. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 P.pallidum:379

F6X7X8              	100.00%		D3B568              	100.00%
Bootstrap support for F6X7X8 as seed ortholog is 100%.
Bootstrap support for D3B568 as seed ortholog is 100%.

Group of orthologs #340. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 P.pallidum:446

F6RMU1              	100.00%		D3BQ86              	100.00%
Bootstrap support for F6RMU1 as seed ortholog is 100%.
Bootstrap support for D3BQ86 as seed ortholog is 100%.

Group of orthologs #341. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 P.pallidum:444

F7AQA9              	100.00%		D3BE54              	100.00%
                    	       		D3BBB8              	17.70%
Bootstrap support for F7AQA9 as seed ortholog is 100%.
Bootstrap support for D3BE54 as seed ortholog is 100%.

Group of orthologs #342. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 P.pallidum:270

F6YL86              	100.00%		D3AX55              	100.00%
Bootstrap support for F6YL86 as seed ortholog is 100%.
Bootstrap support for D3AX55 as seed ortholog is 100%.

Group of orthologs #343. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 P.pallidum:43

F6TVZ8              	100.00%		D3B962              	100.00%
Bootstrap support for F6TVZ8 as seed ortholog is 68%.
Alternative seed ortholog is F6T8C7 (15 bits away from this cluster)
Bootstrap support for D3B962 as seed ortholog is 88%.

Group of orthologs #344. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 P.pallidum:264

F6Z7L9              	100.00%		D3B161              	100.00%
Bootstrap support for F6Z7L9 as seed ortholog is 100%.
Bootstrap support for D3B161 as seed ortholog is 100%.

Group of orthologs #345. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 P.pallidum:443

H2XM91              	100.00%		D3B2S4              	100.00%
Bootstrap support for H2XM91 as seed ortholog is 100%.
Bootstrap support for D3B2S4 as seed ortholog is 100%.

Group of orthologs #346. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 P.pallidum:442

F6YGJ1              	100.00%		D3BCL1              	100.00%
Bootstrap support for F6YGJ1 as seed ortholog is 100%.
Bootstrap support for D3BCL1 as seed ortholog is 100%.

Group of orthologs #347. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 P.pallidum:440

H2Y130              	100.00%		D3BQC3              	100.00%
Bootstrap support for H2Y130 as seed ortholog is 100%.
Bootstrap support for D3BQC3 as seed ortholog is 100%.

Group of orthologs #348. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 P.pallidum:439

F6ZYI6              	100.00%		D3B0B4              	100.00%
Bootstrap support for F6ZYI6 as seed ortholog is 100%.
Bootstrap support for D3B0B4 as seed ortholog is 100%.

Group of orthologs #349. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 P.pallidum:174

F6Y7P7              	100.00%		D3BLI8              	100.00%
Bootstrap support for F6Y7P7 as seed ortholog is 100%.
Bootstrap support for D3BLI8 as seed ortholog is 99%.

Group of orthologs #350. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 P.pallidum:438

F6S7U7              	100.00%		D3B061              	100.00%
Bootstrap support for F6S7U7 as seed ortholog is 100%.
Bootstrap support for D3B061 as seed ortholog is 100%.

Group of orthologs #351. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.pallidum:205

F6T1J8              	100.00%		D3B528              	100.00%
Bootstrap support for F6T1J8 as seed ortholog is 99%.
Bootstrap support for D3B528 as seed ortholog is 99%.

Group of orthologs #352. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 P.pallidum:251

F6UIE4              	100.00%		D3BEH8              	100.00%
Bootstrap support for F6UIE4 as seed ortholog is 100%.
Bootstrap support for D3BEH8 as seed ortholog is 100%.

Group of orthologs #353. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 P.pallidum:438

F6Q601              	100.00%		D3BP70              	100.00%
Bootstrap support for F6Q601 as seed ortholog is 100%.
Bootstrap support for D3BP70 as seed ortholog is 100%.

Group of orthologs #354. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 P.pallidum:438

F7BCV4              	100.00%		D3AZG6              	100.00%
Bootstrap support for F7BCV4 as seed ortholog is 100%.
Bootstrap support for D3AZG6 as seed ortholog is 100%.

Group of orthologs #355. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 P.pallidum:437

H2XZM3              	100.00%		D3AVG7              	100.00%
Bootstrap support for H2XZM3 as seed ortholog is 100%.
Bootstrap support for D3AVG7 as seed ortholog is 100%.

Group of orthologs #356. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 P.pallidum:437

Q1RLD5              	100.00%		D3BBU3              	100.00%
Bootstrap support for Q1RLD5 as seed ortholog is 100%.
Bootstrap support for D3BBU3 as seed ortholog is 100%.

Group of orthologs #357. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 P.pallidum:436

F6X4B8              	100.00%		D3AXG3              	100.00%
Bootstrap support for F6X4B8 as seed ortholog is 100%.
Bootstrap support for D3AXG3 as seed ortholog is 100%.

Group of orthologs #358. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 P.pallidum:436

F7AVN1              	100.00%		D3B481              	100.00%
Bootstrap support for F7AVN1 as seed ortholog is 100%.
Bootstrap support for D3B481 as seed ortholog is 100%.

Group of orthologs #359. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.pallidum:436

F6V7V9              	100.00%		D3BNT9              	100.00%
Bootstrap support for F6V7V9 as seed ortholog is 99%.
Bootstrap support for D3BNT9 as seed ortholog is 100%.

Group of orthologs #360. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 P.pallidum:435

F6ZTE7              	100.00%		D3B625              	100.00%
Bootstrap support for F6ZTE7 as seed ortholog is 100%.
Bootstrap support for D3B625 as seed ortholog is 100%.

Group of orthologs #361. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 P.pallidum:192

F6SLC8              	100.00%		D3AY64              	100.00%
Bootstrap support for F6SLC8 as seed ortholog is 100%.
Bootstrap support for D3AY64 as seed ortholog is 100%.

Group of orthologs #362. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.pallidum:311

F6RCR9              	100.00%		D3B5B2              	100.00%
Bootstrap support for F6RCR9 as seed ortholog is 99%.
Bootstrap support for D3B5B2 as seed ortholog is 100%.

Group of orthologs #363. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 P.pallidum:434

F6RCY1              	100.00%		D3BQM7              	100.00%
Bootstrap support for F6RCY1 as seed ortholog is 100%.
Bootstrap support for D3BQM7 as seed ortholog is 100%.

Group of orthologs #364. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 P.pallidum:434

F7AVB6              	100.00%		D3BD10              	100.00%
Bootstrap support for F7AVB6 as seed ortholog is 99%.
Bootstrap support for D3BD10 as seed ortholog is 100%.

Group of orthologs #365. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 P.pallidum:237

F6TI28              	100.00%		D3BM62              	100.00%
Bootstrap support for F6TI28 as seed ortholog is 100%.
Bootstrap support for D3BM62 as seed ortholog is 100%.

Group of orthologs #366. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 P.pallidum:431

F6TAK8              	100.00%		D3BUD7              	100.00%
                    	       		D3BKB8              	28.23%
Bootstrap support for F6TAK8 as seed ortholog is 100%.
Bootstrap support for D3BUD7 as seed ortholog is 100%.

Group of orthologs #367. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 P.pallidum:64

H2XJS0              	100.00%		D3BAX3              	100.00%
                    	       		D3B6W9              	48.92%
Bootstrap support for H2XJS0 as seed ortholog is 69%.
Alternative seed ortholog is F6UTP0 (31 bits away from this cluster)
Bootstrap support for D3BAX3 as seed ortholog is 89%.

Group of orthologs #368. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 P.pallidum:231

F6YGC1              	100.00%		D3B6C6              	100.00%
Bootstrap support for F6YGC1 as seed ortholog is 99%.
Bootstrap support for D3B6C6 as seed ortholog is 100%.

Group of orthologs #369. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 P.pallidum:430

H2XUE4              	100.00%		D3BEX2              	100.00%
Bootstrap support for H2XUE4 as seed ortholog is 100%.
Bootstrap support for D3BEX2 as seed ortholog is 100%.

Group of orthologs #370. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 P.pallidum:189

F6Z781              	100.00%		D3BIF1              	100.00%
Bootstrap support for F6Z781 as seed ortholog is 100%.
Bootstrap support for D3BIF1 as seed ortholog is 99%.

Group of orthologs #371. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 P.pallidum:270

F6XSL1              	100.00%		D3B1J5              	100.00%
Bootstrap support for F6XSL1 as seed ortholog is 99%.
Bootstrap support for D3B1J5 as seed ortholog is 100%.

Group of orthologs #372. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 P.pallidum:426

F6WAD4              	100.00%		D3BDZ2              	100.00%
Bootstrap support for F6WAD4 as seed ortholog is 100%.
Bootstrap support for D3BDZ2 as seed ortholog is 100%.

Group of orthologs #373. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 P.pallidum:426

F6XP34              	100.00%		D3BF15              	100.00%
Bootstrap support for F6XP34 as seed ortholog is 100%.
Bootstrap support for D3BF15 as seed ortholog is 100%.

Group of orthologs #374. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 P.pallidum:426

F6USH9              	100.00%		D3BQJ8              	100.00%
Bootstrap support for F6USH9 as seed ortholog is 100%.
Bootstrap support for D3BQJ8 as seed ortholog is 100%.

Group of orthologs #375. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.pallidum:425

F6PGY3              	100.00%		D3BKZ8              	100.00%
Bootstrap support for F6PGY3 as seed ortholog is 97%.
Bootstrap support for D3BKZ8 as seed ortholog is 100%.

Group of orthologs #376. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 P.pallidum:282

F7A713              	100.00%		D3BNW4              	100.00%
Bootstrap support for F7A713 as seed ortholog is 100%.
Bootstrap support for D3BNW4 as seed ortholog is 100%.

Group of orthologs #377. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 P.pallidum:194

F7ABR6              	100.00%		D3BV78              	100.00%
F6ZI02              	10.39%		
H2XY21              	5.30%		
Bootstrap support for F7ABR6 as seed ortholog is 100%.
Bootstrap support for D3BV78 as seed ortholog is 99%.

Group of orthologs #378. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 P.pallidum:424

F6TLX8              	100.00%		D3B6L3              	100.00%
Bootstrap support for F6TLX8 as seed ortholog is 100%.
Bootstrap support for D3B6L3 as seed ortholog is 100%.

Group of orthologs #379. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 P.pallidum:424

F6VG31              	100.00%		D3B686              	100.00%
Bootstrap support for F6VG31 as seed ortholog is 100%.
Bootstrap support for D3B686 as seed ortholog is 100%.

Group of orthologs #380. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 P.pallidum:99

F6WA81              	100.00%		D3BQD9              	100.00%
Bootstrap support for F6WA81 as seed ortholog is 100%.
Bootstrap support for D3BQD9 as seed ortholog is 96%.

Group of orthologs #381. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.pallidum:24

F6S4Q0              	100.00%		D3BJJ1              	100.00%
Bootstrap support for F6S4Q0 as seed ortholog is 100%.
Bootstrap support for D3BJJ1 as seed ortholog is 76%.

Group of orthologs #382. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 P.pallidum:146

F7A4T6              	100.00%		D3B3H4              	100.00%
Bootstrap support for F7A4T6 as seed ortholog is 100%.
Bootstrap support for D3B3H4 as seed ortholog is 99%.

Group of orthologs #383. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 P.pallidum:421

F6SPZ6              	100.00%		D3B0Z1              	100.00%
Bootstrap support for F6SPZ6 as seed ortholog is 100%.
Bootstrap support for D3B0Z1 as seed ortholog is 100%.

Group of orthologs #384. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 P.pallidum:421

F6S1D4              	100.00%		D3BGP9              	100.00%
Bootstrap support for F6S1D4 as seed ortholog is 99%.
Bootstrap support for D3BGP9 as seed ortholog is 100%.

Group of orthologs #385. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 P.pallidum:421

F6ST44              	100.00%		D3BRX9              	100.00%
Bootstrap support for F6ST44 as seed ortholog is 100%.
Bootstrap support for D3BRX9 as seed ortholog is 100%.

Group of orthologs #386. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 P.pallidum:310

H2XL44              	100.00%		D3B0D7              	100.00%
Bootstrap support for H2XL44 as seed ortholog is 100%.
Bootstrap support for D3B0D7 as seed ortholog is 100%.

Group of orthologs #387. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 P.pallidum:419

F6T2R5              	100.00%		D3BUZ4              	100.00%
Bootstrap support for F6T2R5 as seed ortholog is 100%.
Bootstrap support for D3BUZ4 as seed ortholog is 100%.

Group of orthologs #388. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 P.pallidum:418

F6WNR2              	100.00%		D3B3B2              	100.00%
Bootstrap support for F6WNR2 as seed ortholog is 100%.
Bootstrap support for D3B3B2 as seed ortholog is 100%.

Group of orthologs #389. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 P.pallidum:418

F6WRF3              	100.00%		D3B866              	100.00%
Bootstrap support for F6WRF3 as seed ortholog is 100%.
Bootstrap support for D3B866 as seed ortholog is 100%.

Group of orthologs #390. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 P.pallidum:258

F7AXN3              	100.00%		D3B9K7              	100.00%
Bootstrap support for F7AXN3 as seed ortholog is 99%.
Bootstrap support for D3B9K7 as seed ortholog is 99%.

Group of orthologs #391. Best score 417 bits
Score difference with first non-orthologous sequence - C.intestinalis:417 P.pallidum:417

F6VGC6              	100.00%		D3BMZ6              	100.00%
Bootstrap support for F6VGC6 as seed ortholog is 100%.
Bootstrap support for D3BMZ6 as seed ortholog is 100%.

Group of orthologs #392. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 P.pallidum:416

F6TEN3              	100.00%		D3B7I3              	100.00%
Bootstrap support for F6TEN3 as seed ortholog is 100%.
Bootstrap support for D3B7I3 as seed ortholog is 100%.

Group of orthologs #393. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 P.pallidum:416

F6XDI5              	100.00%		D3B606              	100.00%
Bootstrap support for F6XDI5 as seed ortholog is 100%.
Bootstrap support for D3B606 as seed ortholog is 100%.

Group of orthologs #394. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 P.pallidum:416

F6XK22              	100.00%		D3BRT9              	100.00%
Bootstrap support for F6XK22 as seed ortholog is 100%.
Bootstrap support for D3BRT9 as seed ortholog is 100%.

Group of orthologs #395. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 P.pallidum:415

H2XUG5              	100.00%		D3BJV5              	100.00%
H2XXW3              	6.37%		
Bootstrap support for H2XUG5 as seed ortholog is 100%.
Bootstrap support for D3BJV5 as seed ortholog is 100%.

Group of orthologs #396. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 P.pallidum:254

F6SZ54              	100.00%		D3AWT6              	100.00%
Bootstrap support for F6SZ54 as seed ortholog is 100%.
Bootstrap support for D3AWT6 as seed ortholog is 100%.

Group of orthologs #397. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 P.pallidum:415

F6RXZ8              	100.00%		D3BDL6              	100.00%
Bootstrap support for F6RXZ8 as seed ortholog is 100%.
Bootstrap support for D3BDL6 as seed ortholog is 100%.

Group of orthologs #398. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 P.pallidum:365

F7A606              	100.00%		D3AWT2              	100.00%
Bootstrap support for F7A606 as seed ortholog is 100%.
Bootstrap support for D3AWT2 as seed ortholog is 100%.

Group of orthologs #399. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 P.pallidum:415

F6YVU0              	100.00%		D3BQ08              	100.00%
Bootstrap support for F6YVU0 as seed ortholog is 100%.
Bootstrap support for D3BQ08 as seed ortholog is 100%.

Group of orthologs #400. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 P.pallidum:413

F6XKA2              	100.00%		D3AVU8              	100.00%
Bootstrap support for F6XKA2 as seed ortholog is 100%.
Bootstrap support for D3AVU8 as seed ortholog is 100%.

Group of orthologs #401. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 P.pallidum:353

F6UHI7              	100.00%		D3BBG6              	100.00%
Bootstrap support for F6UHI7 as seed ortholog is 100%.
Bootstrap support for D3BBG6 as seed ortholog is 100%.

Group of orthologs #402. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.pallidum:413

F6SUS9              	100.00%		D3BK71              	100.00%
Bootstrap support for F6SUS9 as seed ortholog is 99%.
Bootstrap support for D3BK71 as seed ortholog is 100%.

Group of orthologs #403. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 P.pallidum:412

F7BBT3              	100.00%		D3BDI3              	100.00%
Bootstrap support for F7BBT3 as seed ortholog is 100%.
Bootstrap support for D3BDI3 as seed ortholog is 100%.

Group of orthologs #404. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.pallidum:92

F6UK45              	100.00%		D3B313              	100.00%
Bootstrap support for F6UK45 as seed ortholog is 93%.
Bootstrap support for D3B313 as seed ortholog is 95%.

Group of orthologs #405. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.pallidum:411

F6TGA3              	100.00%		D3BQM6              	100.00%
Bootstrap support for F6TGA3 as seed ortholog is 79%.
Bootstrap support for D3BQM6 as seed ortholog is 100%.

Group of orthologs #406. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 P.pallidum:281

F6XT42              	100.00%		D3BH32              	100.00%
Bootstrap support for F6XT42 as seed ortholog is 99%.
Bootstrap support for D3BH32 as seed ortholog is 100%.

Group of orthologs #407. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 P.pallidum:411

F7B0I1              	100.00%		D3BQJ7              	100.00%
Bootstrap support for F7B0I1 as seed ortholog is 100%.
Bootstrap support for D3BQJ7 as seed ortholog is 100%.

Group of orthologs #408. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 P.pallidum:320

H2XYJ2              	100.00%		D3BB75              	100.00%
Bootstrap support for H2XYJ2 as seed ortholog is 100%.
Bootstrap support for D3BB75 as seed ortholog is 100%.

Group of orthologs #409. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:194

F6T7R0              	100.00%		D3AWF9              	100.00%
Bootstrap support for F6T7R0 as seed ortholog is 99%.
Bootstrap support for D3AWF9 as seed ortholog is 100%.

Group of orthologs #410. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 P.pallidum:408

H2Y0S6              	100.00%		D3AZX0              	100.00%
Bootstrap support for H2Y0S6 as seed ortholog is 100%.
Bootstrap support for D3AZX0 as seed ortholog is 100%.

Group of orthologs #411. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 P.pallidum:407

F6PX61              	100.00%		D3BPW8              	100.00%
Bootstrap support for F6PX61 as seed ortholog is 100%.
Bootstrap support for D3BPW8 as seed ortholog is 100%.

Group of orthologs #412. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 P.pallidum:407

F6TBI8              	100.00%		D3BKC5              	100.00%
Bootstrap support for F6TBI8 as seed ortholog is 100%.
Bootstrap support for D3BKC5 as seed ortholog is 100%.

Group of orthologs #413. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:407

F7B1X4              	100.00%		D3B3W0              	100.00%
Bootstrap support for F7B1X4 as seed ortholog is 84%.
Bootstrap support for D3B3W0 as seed ortholog is 100%.

Group of orthologs #414. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 P.pallidum:406

F6W1Y5              	100.00%		D3B226              	100.00%
Bootstrap support for F6W1Y5 as seed ortholog is 100%.
Bootstrap support for D3B226 as seed ortholog is 100%.

Group of orthologs #415. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 P.pallidum:406

H2XLP3              	100.00%		D3B2H8              	100.00%
Bootstrap support for H2XLP3 as seed ortholog is 100%.
Bootstrap support for D3B2H8 as seed ortholog is 100%.

Group of orthologs #416. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 P.pallidum:405

H2Y288              	100.00%		D3AYN6              	100.00%
Bootstrap support for H2Y288 as seed ortholog is 100%.
Bootstrap support for D3AYN6 as seed ortholog is 100%.

Group of orthologs #417. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 P.pallidum:403

F7BMR9              	100.00%		D3BK65              	100.00%
Bootstrap support for F7BMR9 as seed ortholog is 100%.
Bootstrap support for D3BK65 as seed ortholog is 100%.

Group of orthologs #418. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:402 P.pallidum:402

F6U6T9              	100.00%		D3AX77              	100.00%
Bootstrap support for F6U6T9 as seed ortholog is 100%.
Bootstrap support for D3AX77 as seed ortholog is 100%.

Group of orthologs #419. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.pallidum:402

F6PJ70              	100.00%		D3BAI4              	100.00%
Bootstrap support for F6PJ70 as seed ortholog is 99%.
Bootstrap support for D3BAI4 as seed ortholog is 100%.

Group of orthologs #420. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:402 P.pallidum:338

F6RA65              	100.00%		D3BDY0              	100.00%
Bootstrap support for F6RA65 as seed ortholog is 100%.
Bootstrap support for D3BDY0 as seed ortholog is 100%.

Group of orthologs #421. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.pallidum:223

F6Q0M2              	100.00%		D3B1I2              	100.00%
Bootstrap support for F6Q0M2 as seed ortholog is 98%.
Bootstrap support for D3B1I2 as seed ortholog is 100%.

Group of orthologs #422. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 P.pallidum:401

F6PRY2              	100.00%		D3BL94              	100.00%
Bootstrap support for F6PRY2 as seed ortholog is 100%.
Bootstrap support for D3BL94 as seed ortholog is 100%.

Group of orthologs #423. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 P.pallidum:401

F6XTJ3              	100.00%		D3BNF4              	100.00%
Bootstrap support for F6XTJ3 as seed ortholog is 100%.
Bootstrap support for D3BNF4 as seed ortholog is 100%.

Group of orthologs #424. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 P.pallidum:401

F6Y901              	100.00%		D3BSE5              	100.00%
Bootstrap support for F6Y901 as seed ortholog is 100%.
Bootstrap support for D3BSE5 as seed ortholog is 100%.

Group of orthologs #425. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.pallidum:240

H2XS68              	100.00%		D3B2T1              	100.00%
H2XK79              	82.14%		
Bootstrap support for H2XS68 as seed ortholog is 99%.
Bootstrap support for D3B2T1 as seed ortholog is 100%.

Group of orthologs #426. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 P.pallidum:400

F6S4U2              	100.00%		D3B2F1              	100.00%
Bootstrap support for F6S4U2 as seed ortholog is 100%.
Bootstrap support for D3B2F1 as seed ortholog is 100%.

Group of orthologs #427. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 P.pallidum:321

F6PYJ8              	100.00%		D3BR10              	100.00%
Bootstrap support for F6PYJ8 as seed ortholog is 100%.
Bootstrap support for D3BR10 as seed ortholog is 100%.

Group of orthologs #428. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 P.pallidum:399

F7A5J2              	100.00%		D3B7T8              	100.00%
Bootstrap support for F7A5J2 as seed ortholog is 100%.
Bootstrap support for D3B7T8 as seed ortholog is 100%.

Group of orthologs #429. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 P.pallidum:147

H2XLC2              	100.00%		D3BJF3              	100.00%
Bootstrap support for H2XLC2 as seed ortholog is 100%.
Bootstrap support for D3BJF3 as seed ortholog is 100%.

Group of orthologs #430. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 P.pallidum:269

F6UBT3              	100.00%		D3B6D9              	100.00%
Bootstrap support for F6UBT3 as seed ortholog is 100%.
Bootstrap support for D3B6D9 as seed ortholog is 100%.

Group of orthologs #431. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 P.pallidum:397

F6PXA9              	100.00%		D3BAR7              	100.00%
Bootstrap support for F6PXA9 as seed ortholog is 100%.
Bootstrap support for D3BAR7 as seed ortholog is 100%.

Group of orthologs #432. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 P.pallidum:397

F6X4W9              	100.00%		D3AYB4              	100.00%
Bootstrap support for F6X4W9 as seed ortholog is 100%.
Bootstrap support for D3AYB4 as seed ortholog is 100%.

Group of orthologs #433. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 P.pallidum:284

F6YGJ7              	100.00%		D3B796              	100.00%
Bootstrap support for F6YGJ7 as seed ortholog is 100%.
Bootstrap support for D3B796 as seed ortholog is 100%.

Group of orthologs #434. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 P.pallidum:395

H2XZ65              	100.00%		D3BPT5              	100.00%
Bootstrap support for H2XZ65 as seed ortholog is 100%.
Bootstrap support for D3BPT5 as seed ortholog is 100%.

Group of orthologs #435. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 P.pallidum:394

F6QI83              	100.00%		D3BN56              	100.00%
Bootstrap support for F6QI83 as seed ortholog is 100%.
Bootstrap support for D3BN56 as seed ortholog is 100%.

Group of orthologs #436. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 P.pallidum:393

F7ASN6              	100.00%		D3B5U0              	100.00%
Bootstrap support for F7ASN6 as seed ortholog is 100%.
Bootstrap support for D3B5U0 as seed ortholog is 100%.

Group of orthologs #437. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 P.pallidum:393

F7B7E9              	100.00%		D3B9T8              	100.00%
Bootstrap support for F7B7E9 as seed ortholog is 100%.
Bootstrap support for D3B9T8 as seed ortholog is 100%.

Group of orthologs #438. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 P.pallidum:287

F6UJ45              	100.00%		D3BM03              	100.00%
Bootstrap support for F6UJ45 as seed ortholog is 100%.
Bootstrap support for D3BM03 as seed ortholog is 100%.

Group of orthologs #439. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 P.pallidum:293

F7AZV0              	100.00%		D3BV44              	100.00%
Bootstrap support for F7AZV0 as seed ortholog is 100%.
Bootstrap support for D3BV44 as seed ortholog is 100%.

Group of orthologs #440. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 P.pallidum:42

F6YKJ2              	100.00%		D3B3I4              	100.00%
Bootstrap support for F6YKJ2 as seed ortholog is 100%.
Bootstrap support for D3B3I4 as seed ortholog is 78%.

Group of orthologs #441. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.pallidum:75

F7ARV5              	100.00%		D3BMU7              	100.00%
Bootstrap support for F7ARV5 as seed ortholog is 99%.
Bootstrap support for D3BMU7 as seed ortholog is 99%.

Group of orthologs #442. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 P.pallidum:391

F7B4V9              	100.00%		D3BNN4              	100.00%
Bootstrap support for F7B4V9 as seed ortholog is 100%.
Bootstrap support for D3BNN4 as seed ortholog is 100%.

Group of orthologs #443. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 P.pallidum:66

F6SYF4              	100.00%		D3B6F1              	100.00%
Bootstrap support for F6SYF4 as seed ortholog is 100%.
Bootstrap support for D3B6F1 as seed ortholog is 93%.

Group of orthologs #444. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 P.pallidum:390

F6PP44              	100.00%		D3BKL2              	100.00%
Bootstrap support for F6PP44 as seed ortholog is 100%.
Bootstrap support for D3BKL2 as seed ortholog is 100%.

Group of orthologs #445. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 P.pallidum:390

F6WNN3              	100.00%		D3BE93              	100.00%
Bootstrap support for F6WNN3 as seed ortholog is 100%.
Bootstrap support for D3BE93 as seed ortholog is 100%.

Group of orthologs #446. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 P.pallidum:389

F6YWY7              	100.00%		D3BV36              	100.00%
                    	       		D3B2K8              	7.88%
Bootstrap support for F6YWY7 as seed ortholog is 100%.
Bootstrap support for D3BV36 as seed ortholog is 100%.

Group of orthologs #447. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 P.pallidum:389

F6VZF6              	100.00%		D3B4Z6              	100.00%
Bootstrap support for F6VZF6 as seed ortholog is 100%.
Bootstrap support for D3B4Z6 as seed ortholog is 100%.

Group of orthologs #448. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 P.pallidum:389

H2XU88              	100.00%		D3BDV7              	100.00%
Bootstrap support for H2XU88 as seed ortholog is 100%.
Bootstrap support for D3BDV7 as seed ortholog is 100%.

Group of orthologs #449. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 P.pallidum:388

F6QE47              	100.00%		D3BEA4              	100.00%
Bootstrap support for F6QE47 as seed ortholog is 100%.
Bootstrap support for D3BEA4 as seed ortholog is 100%.

Group of orthologs #450. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 P.pallidum:386

F6VJT7              	100.00%		D3B3R0              	100.00%
F7BLJ0              	22.43%		D3BCZ6              	43.54%
                    	       		D3BD24              	21.29%
Bootstrap support for F6VJT7 as seed ortholog is 100%.
Bootstrap support for D3B3R0 as seed ortholog is 100%.

Group of orthologs #451. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 P.pallidum:305

F6SK29              	100.00%		D3BE97              	100.00%
Bootstrap support for F6SK29 as seed ortholog is 100%.
Bootstrap support for D3BE97 as seed ortholog is 100%.

Group of orthologs #452. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 P.pallidum:386

F6QTS6              	100.00%		D3BQL2              	100.00%
Bootstrap support for F6QTS6 as seed ortholog is 100%.
Bootstrap support for D3BQL2 as seed ortholog is 100%.

Group of orthologs #453. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.pallidum:61

F6PKL5              	100.00%		D3BUD0              	100.00%
Bootstrap support for F6PKL5 as seed ortholog is 99%.
Bootstrap support for D3BUD0 as seed ortholog is 90%.

Group of orthologs #454. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 P.pallidum:386

H2XJK0              	100.00%		D3BU83              	100.00%
Bootstrap support for H2XJK0 as seed ortholog is 100%.
Bootstrap support for D3BU83 as seed ortholog is 100%.

Group of orthologs #455. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 P.pallidum:305

H2XZG0              	100.00%		D3BR13              	100.00%
Bootstrap support for H2XZG0 as seed ortholog is 100%.
Bootstrap support for D3BR13 as seed ortholog is 100%.

Group of orthologs #456. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 P.pallidum:385

F6QE16              	100.00%		D3BEU0              	100.00%
Bootstrap support for F6QE16 as seed ortholog is 100%.
Bootstrap support for D3BEU0 as seed ortholog is 100%.

Group of orthologs #457. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 P.pallidum:384

F6PRZ9              	100.00%		D3AZL5              	100.00%
Bootstrap support for F6PRZ9 as seed ortholog is 100%.
Bootstrap support for D3AZL5 as seed ortholog is 100%.

Group of orthologs #458. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 P.pallidum:383

F6Y1N2              	100.00%		D3BIF4              	100.00%
Bootstrap support for F6Y1N2 as seed ortholog is 100%.
Bootstrap support for D3BIF4 as seed ortholog is 100%.

Group of orthologs #459. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 P.pallidum:382

F6Z9I2              	100.00%		D3BRT1              	100.00%
Bootstrap support for F6Z9I2 as seed ortholog is 100%.
Bootstrap support for D3BRT1 as seed ortholog is 100%.

Group of orthologs #460. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.pallidum:381

F6S9Y0              	100.00%		D3BCT5              	100.00%
                    	       		D3BE81              	100.00%
Bootstrap support for F6S9Y0 as seed ortholog is 95%.
Bootstrap support for D3BCT5 as seed ortholog is 100%.
Bootstrap support for D3BE81 as seed ortholog is 100%.

Group of orthologs #461. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 P.pallidum:381

F6TQ69              	100.00%		D3BCF9              	100.00%
Bootstrap support for F6TQ69 as seed ortholog is 100%.
Bootstrap support for D3BCF9 as seed ortholog is 100%.

Group of orthologs #462. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 P.pallidum:381

F6U8C7              	100.00%		D3BQG1              	100.00%
Bootstrap support for F6U8C7 as seed ortholog is 100%.
Bootstrap support for D3BQG1 as seed ortholog is 100%.

Group of orthologs #463. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 P.pallidum:381

H2Y0G9              	100.00%		D3BCQ2              	100.00%
Bootstrap support for H2Y0G9 as seed ortholog is 100%.
Bootstrap support for D3BCQ2 as seed ortholog is 100%.

Group of orthologs #464. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 P.pallidum:379

F6X600              	100.00%		D3BN73              	100.00%
Bootstrap support for F6X600 as seed ortholog is 100%.
Bootstrap support for D3BN73 as seed ortholog is 100%.

Group of orthologs #465. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 P.pallidum:379

F7BIS1              	100.00%		D3BS65              	100.00%
Bootstrap support for F7BIS1 as seed ortholog is 100%.
Bootstrap support for D3BS65 as seed ortholog is 100%.

Group of orthologs #466. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 P.pallidum:290

F6VEU2              	100.00%		D3BEV0              	100.00%
Bootstrap support for F6VEU2 as seed ortholog is 100%.
Bootstrap support for D3BEV0 as seed ortholog is 100%.

Group of orthologs #467. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 P.pallidum:378

F6QY24              	100.00%		D3BTM5              	100.00%
Bootstrap support for F6QY24 as seed ortholog is 100%.
Bootstrap support for D3BTM5 as seed ortholog is 100%.

Group of orthologs #468. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 P.pallidum:378

H2XTN4              	100.00%		D3B6J5              	100.00%
Bootstrap support for H2XTN4 as seed ortholog is 100%.
Bootstrap support for D3B6J5 as seed ortholog is 100%.

Group of orthologs #469. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.pallidum:173

F7BH52              	100.00%		D3BR06              	100.00%
Bootstrap support for F7BH52 as seed ortholog is 92%.
Bootstrap support for D3BR06 as seed ortholog is 100%.

Group of orthologs #470. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 P.pallidum:377

F6UI47              	100.00%		D3B0M1              	100.00%
Bootstrap support for F6UI47 as seed ortholog is 100%.
Bootstrap support for D3B0M1 as seed ortholog is 100%.

Group of orthologs #471. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 P.pallidum:376

F6SZ37              	100.00%		D3B1Z3              	100.00%
Bootstrap support for F6SZ37 as seed ortholog is 100%.
Bootstrap support for D3B1Z3 as seed ortholog is 100%.

Group of orthologs #472. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 P.pallidum:296

F7BML6              	100.00%		D3AZM5              	100.00%
Bootstrap support for F7BML6 as seed ortholog is 99%.
Bootstrap support for D3AZM5 as seed ortholog is 100%.

Group of orthologs #473. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 P.pallidum:286

F6ZFW2              	100.00%		D3B9D9              	100.00%
Bootstrap support for F6ZFW2 as seed ortholog is 100%.
Bootstrap support for D3B9D9 as seed ortholog is 100%.

Group of orthologs #474. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 P.pallidum:218

H2XXD3              	100.00%		D3B9A5              	100.00%
Bootstrap support for H2XXD3 as seed ortholog is 56%.
Alternative seed ortholog is F6PH07 (5 bits away from this cluster)
Bootstrap support for D3B9A5 as seed ortholog is 100%.

Group of orthologs #475. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 P.pallidum:376

H2Y1U3              	100.00%		D3BE91              	100.00%
Bootstrap support for H2Y1U3 as seed ortholog is 100%.
Bootstrap support for D3BE91 as seed ortholog is 100%.

Group of orthologs #476. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 P.pallidum:259

F6ZQY6              	100.00%		D3BCL7              	100.00%
Bootstrap support for F6ZQY6 as seed ortholog is 100%.
Bootstrap support for D3BCL7 as seed ortholog is 100%.

Group of orthologs #477. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 P.pallidum:375

F7BBJ9              	100.00%		D3BCH5              	100.00%
Bootstrap support for F7BBJ9 as seed ortholog is 100%.
Bootstrap support for D3BCH5 as seed ortholog is 100%.

Group of orthologs #478. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 P.pallidum:375

F7B5P4              	100.00%		D3BCZ2              	100.00%
Bootstrap support for F7B5P4 as seed ortholog is 100%.
Bootstrap support for D3BCZ2 as seed ortholog is 100%.

Group of orthologs #479. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.pallidum:206

H2Y3M9              	100.00%		D3BND6              	100.00%
F6UFU1              	10.10%		
F6QL57              	9.96%		
Bootstrap support for H2Y3M9 as seed ortholog is 96%.
Bootstrap support for D3BND6 as seed ortholog is 100%.

Group of orthologs #480. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 P.pallidum:374

H2XT24              	100.00%		D3BA80              	100.00%
Bootstrap support for H2XT24 as seed ortholog is 100%.
Bootstrap support for D3BA80 as seed ortholog is 100%.

Group of orthologs #481. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 P.pallidum:374

L7N0S3              	100.00%		D3BE83              	100.00%
Bootstrap support for L7N0S3 as seed ortholog is 100%.
Bootstrap support for D3BE83 as seed ortholog is 100%.

Group of orthologs #482. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 P.pallidum:85

F6ZRX9              	100.00%		D3BSZ9              	100.00%
                    	       		D3BKV2              	10.49%
Bootstrap support for F6ZRX9 as seed ortholog is 100%.
Bootstrap support for D3BSZ9 as seed ortholog is 96%.

Group of orthologs #483. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.pallidum:215

F6ZRR5              	100.00%		D3B2W2              	100.00%
Bootstrap support for F6ZRR5 as seed ortholog is 99%.
Bootstrap support for D3B2W2 as seed ortholog is 100%.

Group of orthologs #484. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 P.pallidum:373

H2Y2G1              	100.00%		D3B3Z7              	100.00%
Bootstrap support for H2Y2G1 as seed ortholog is 100%.
Bootstrap support for D3B3Z7 as seed ortholog is 100%.

Group of orthologs #485. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 P.pallidum:372

F7A2G6              	100.00%		D3BEF3              	100.00%
H2XP90              	14.94%		
H2XYS1              	5.90%		
Bootstrap support for F7A2G6 as seed ortholog is 100%.
Bootstrap support for D3BEF3 as seed ortholog is 100%.

Group of orthologs #486. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 P.pallidum:371

F6SMQ3              	100.00%		D3BEP3              	100.00%
F6R222              	35.34%		
F6WEY7              	17.53%		
F7AZ47              	5.79%		
Bootstrap support for F6SMQ3 as seed ortholog is 100%.
Bootstrap support for D3BEP3 as seed ortholog is 100%.

Group of orthologs #487. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 P.pallidum:371

F6XUD5              	100.00%		D3BJZ6              	100.00%
F6V9F0              	27.49%		
Bootstrap support for F6XUD5 as seed ortholog is 100%.
Bootstrap support for D3BJZ6 as seed ortholog is 100%.

Group of orthologs #488. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 P.pallidum:327

F6TX56              	100.00%		D3B7P5              	100.00%
Bootstrap support for F6TX56 as seed ortholog is 100%.
Bootstrap support for D3B7P5 as seed ortholog is 100%.

Group of orthologs #489. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 P.pallidum:371

F6QF37              	100.00%		D3BTQ4              	100.00%
Bootstrap support for F6QF37 as seed ortholog is 100%.
Bootstrap support for D3BTQ4 as seed ortholog is 100%.

Group of orthologs #490. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 P.pallidum:371

F6XCG6              	100.00%		D3BIZ7              	100.00%
Bootstrap support for F6XCG6 as seed ortholog is 100%.
Bootstrap support for D3BIZ7 as seed ortholog is 100%.

Group of orthologs #491. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:57

F6W1F7              	100.00%		D3BAM1              	100.00%
Bootstrap support for F6W1F7 as seed ortholog is 99%.
Bootstrap support for D3BAM1 as seed ortholog is 88%.

Group of orthologs #492. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 P.pallidum:370

F6TLL4              	100.00%		D3BHT0              	100.00%
Bootstrap support for F6TLL4 as seed ortholog is 100%.
Bootstrap support for D3BHT0 as seed ortholog is 100%.

Group of orthologs #493. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 P.pallidum:370

F6W9I8              	100.00%		D3BVN2              	100.00%
Bootstrap support for F6W9I8 as seed ortholog is 100%.
Bootstrap support for D3BVN2 as seed ortholog is 100%.

Group of orthologs #494. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 P.pallidum:369

F6SZY0              	100.00%		D3AVI8              	100.00%
Bootstrap support for F6SZY0 as seed ortholog is 100%.
Bootstrap support for D3AVI8 as seed ortholog is 100%.

Group of orthologs #495. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 P.pallidum:369

F6XUX1              	100.00%		D3BSA4              	100.00%
Bootstrap support for F6XUX1 as seed ortholog is 100%.
Bootstrap support for D3BSA4 as seed ortholog is 100%.

Group of orthologs #496. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 P.pallidum:262

H2XXR3              	100.00%		D3B7N1              	100.00%
                    	       		D3BQA7              	9.93%
Bootstrap support for H2XXR3 as seed ortholog is 99%.
Bootstrap support for D3B7N1 as seed ortholog is 100%.

Group of orthologs #497. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 P.pallidum:367

F6Q989              	100.00%		D3AYJ1              	100.00%
Bootstrap support for F6Q989 as seed ortholog is 100%.
Bootstrap support for D3AYJ1 as seed ortholog is 100%.

Group of orthologs #498. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 P.pallidum:367

F6X3S3              	100.00%		D3AX31              	100.00%
Bootstrap support for F6X3S3 as seed ortholog is 100%.
Bootstrap support for D3AX31 as seed ortholog is 100%.

Group of orthologs #499. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 P.pallidum:367

F6YHS8              	100.00%		D3AYA8              	100.00%
Bootstrap support for F6YHS8 as seed ortholog is 100%.
Bootstrap support for D3AYA8 as seed ortholog is 100%.

Group of orthologs #500. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 P.pallidum:366

F6S8P8              	100.00%		D3B2C9              	100.00%
F6WS10              	100.00%		D3B2C8              	100.00%
F6XNT2              	27.35%		D3BM64              	28.71%
F6WJF4              	10.29%		
Bootstrap support for F6S8P8 as seed ortholog is 100%.
Bootstrap support for F6WS10 as seed ortholog is 100%.
Bootstrap support for D3B2C9 as seed ortholog is 100%.
Bootstrap support for D3B2C8 as seed ortholog is 100%.

Group of orthologs #501. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 P.pallidum:366

F6UQL0              	100.00%		D3B4Z7              	100.00%
Bootstrap support for F6UQL0 as seed ortholog is 100%.
Bootstrap support for D3B4Z7 as seed ortholog is 100%.

Group of orthologs #502. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 P.pallidum:235

F6YGL5              	100.00%		D3AXX6              	100.00%
Bootstrap support for F6YGL5 as seed ortholog is 100%.
Bootstrap support for D3AXX6 as seed ortholog is 100%.

Group of orthologs #503. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 P.pallidum:366

F6UX10              	100.00%		D3B9H0              	100.00%
Bootstrap support for F6UX10 as seed ortholog is 100%.
Bootstrap support for D3B9H0 as seed ortholog is 100%.

Group of orthologs #504. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 P.pallidum:366

F7AX37              	100.00%		D3AXC9              	100.00%
Bootstrap support for F7AX37 as seed ortholog is 100%.
Bootstrap support for D3AXC9 as seed ortholog is 100%.

Group of orthologs #505. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 P.pallidum:366

F6U7Z2              	100.00%		D3BUY8              	100.00%
Bootstrap support for F6U7Z2 as seed ortholog is 100%.
Bootstrap support for D3BUY8 as seed ortholog is 100%.

Group of orthologs #506. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 P.pallidum:366

H2XSN3              	100.00%		D3BHS9              	100.00%
Bootstrap support for H2XSN3 as seed ortholog is 100%.
Bootstrap support for D3BHS9 as seed ortholog is 100%.

Group of orthologs #507. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.pallidum:365

H2Y2S2              	100.00%		D3B6K6              	100.00%
Bootstrap support for H2Y2S2 as seed ortholog is 99%.
Bootstrap support for D3B6K6 as seed ortholog is 100%.

Group of orthologs #508. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 P.pallidum:364

F7AJP1              	100.00%		D3AVJ4              	100.00%
Bootstrap support for F7AJP1 as seed ortholog is 100%.
Bootstrap support for D3AVJ4 as seed ortholog is 100%.

Group of orthologs #509. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 P.pallidum:364

H2XLC1              	100.00%		D3BEF1              	100.00%
Bootstrap support for H2XLC1 as seed ortholog is 100%.
Bootstrap support for D3BEF1 as seed ortholog is 100%.

Group of orthologs #510. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 P.pallidum:364

H2XWR9              	100.00%		D3BR29              	100.00%
Bootstrap support for H2XWR9 as seed ortholog is 100%.
Bootstrap support for D3BR29 as seed ortholog is 100%.

Group of orthologs #511. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.pallidum:363

F6Y1R8              	100.00%		D3BQ91              	100.00%
F6ZK74              	6.34%		
Bootstrap support for F6Y1R8 as seed ortholog is 95%.
Bootstrap support for D3BQ91 as seed ortholog is 100%.

Group of orthologs #512. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 P.pallidum:363

F6QID5              	100.00%		D3B367              	100.00%
Bootstrap support for F6QID5 as seed ortholog is 100%.
Bootstrap support for D3B367 as seed ortholog is 100%.

Group of orthologs #513. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 P.pallidum:363

F6RBT7              	100.00%		D3B8H0              	100.00%
Bootstrap support for F6RBT7 as seed ortholog is 100%.
Bootstrap support for D3B8H0 as seed ortholog is 100%.

Group of orthologs #514. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 P.pallidum:316

F6Z0E0              	100.00%		D3AWA6              	100.00%
Bootstrap support for F6Z0E0 as seed ortholog is 100%.
Bootstrap support for D3AWA6 as seed ortholog is 100%.

Group of orthologs #515. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.pallidum:185

F7B040              	100.00%		D3B695              	100.00%
Bootstrap support for F7B040 as seed ortholog is 100%.
Bootstrap support for D3B695 as seed ortholog is 99%.

Group of orthologs #516. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 P.pallidum:363

F6U8B5              	100.00%		D3BNE7              	100.00%
Bootstrap support for F6U8B5 as seed ortholog is 100%.
Bootstrap support for D3BNE7 as seed ortholog is 100%.

Group of orthologs #517. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 P.pallidum:102

F6YY92              	100.00%		D3B495              	100.00%
F6QS52              	26.88%		D3BH17              	36.67%
F6S7X2              	11.35%		D3BC42              	36.67%
H2XPT1              	9.85%		D3BC30              	36.33%
                    	       		D3BC44              	29.88%
                    	       		D3BM70              	23.09%
                    	       		D3BQT6              	11.04%
Bootstrap support for F6YY92 as seed ortholog is 97%.
Bootstrap support for D3B495 as seed ortholog is 98%.

Group of orthologs #518. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:53

Q8WSS1              	100.00%		D3BRV8              	100.00%
H2Y1Q1              	26.99%		
F6PR32              	25.85%		
Bootstrap support for Q8WSS1 as seed ortholog is 98%.
Bootstrap support for D3BRV8 as seed ortholog is 92%.

Group of orthologs #519. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.pallidum:86

F6PQW3              	100.00%		D3B650              	100.00%
Bootstrap support for F6PQW3 as seed ortholog is 96%.
Bootstrap support for D3B650 as seed ortholog is 40%.
Alternative seed ortholog is D3AXZ1 (86 bits away from this cluster)

Group of orthologs #520. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 P.pallidum:361

F7AFG0              	100.00%		D3B058              	100.00%
Bootstrap support for F7AFG0 as seed ortholog is 100%.
Bootstrap support for D3B058 as seed ortholog is 100%.

Group of orthologs #521. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 P.pallidum:361

F7A1S8              	100.00%		D3BLV1              	100.00%
Bootstrap support for F7A1S8 as seed ortholog is 100%.
Bootstrap support for D3BLV1 as seed ortholog is 100%.

Group of orthologs #522. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 P.pallidum:359

F6R901              	100.00%		D3BE20              	100.00%
Bootstrap support for F6R901 as seed ortholog is 100%.
Bootstrap support for D3BE20 as seed ortholog is 100%.

Group of orthologs #523. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 P.pallidum:359

F6R8V3              	100.00%		D3BGC0              	100.00%
Bootstrap support for F6R8V3 as seed ortholog is 100%.
Bootstrap support for D3BGC0 as seed ortholog is 100%.

Group of orthologs #524. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.pallidum:169

F7A961              	100.00%		D3B8W9              	100.00%
Bootstrap support for F7A961 as seed ortholog is 87%.
Bootstrap support for D3B8W9 as seed ortholog is 99%.

Group of orthologs #525. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 P.pallidum:315

F7BLS5              	100.00%		D3BBL0              	100.00%
Bootstrap support for F7BLS5 as seed ortholog is 100%.
Bootstrap support for D3BBL0 as seed ortholog is 100%.

Group of orthologs #526. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 P.pallidum:359

F6VCH9              	100.00%		D3BTM3              	100.00%
Bootstrap support for F6VCH9 as seed ortholog is 100%.
Bootstrap support for D3BTM3 as seed ortholog is 100%.

Group of orthologs #527. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 P.pallidum:359

F6ZPV8              	100.00%		D3BK08              	100.00%
Bootstrap support for F6ZPV8 as seed ortholog is 100%.
Bootstrap support for D3BK08 as seed ortholog is 100%.

Group of orthologs #528. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 P.pallidum:291

H2Y0H5              	100.00%		D3B9R3              	100.00%
F6V8V5              	28.07%		
Bootstrap support for H2Y0H5 as seed ortholog is 100%.
Bootstrap support for D3B9R3 as seed ortholog is 100%.

Group of orthologs #529. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 P.pallidum:357

F6UDY1              	100.00%		D3BD56              	100.00%
Bootstrap support for F6UDY1 as seed ortholog is 100%.
Bootstrap support for D3BD56 as seed ortholog is 100%.

Group of orthologs #530. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 P.pallidum:195

H2XY01              	100.00%		D3BSL6              	100.00%
F6Q7A6              	9.06%		
Bootstrap support for H2XY01 as seed ortholog is 100%.
Bootstrap support for D3BSL6 as seed ortholog is 100%.

Group of orthologs #531. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 P.pallidum:356

F6SSX2              	100.00%		D3B0J5              	100.00%
Bootstrap support for F6SSX2 as seed ortholog is 100%.
Bootstrap support for D3B0J5 as seed ortholog is 100%.

Group of orthologs #532. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.pallidum:297

F6SUA6              	100.00%		D3B1Q6              	100.00%
Bootstrap support for F6SUA6 as seed ortholog is 96%.
Bootstrap support for D3B1Q6 as seed ortholog is 100%.

Group of orthologs #533. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 P.pallidum:356

F6Q096              	100.00%		D3BFD7              	100.00%
Bootstrap support for F6Q096 as seed ortholog is 100%.
Bootstrap support for D3BFD7 as seed ortholog is 100%.

Group of orthologs #534. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 P.pallidum:356

F6XIP9              	100.00%		D3B418              	100.00%
Bootstrap support for F6XIP9 as seed ortholog is 100%.
Bootstrap support for D3B418 as seed ortholog is 100%.

Group of orthologs #535. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 P.pallidum:356

F6TTJ7              	100.00%		D3BH81              	100.00%
Bootstrap support for F6TTJ7 as seed ortholog is 100%.
Bootstrap support for D3BH81 as seed ortholog is 100%.

Group of orthologs #536. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 P.pallidum:187

F7A0P0              	100.00%		D3B839              	100.00%
Bootstrap support for F7A0P0 as seed ortholog is 100%.
Bootstrap support for D3B839 as seed ortholog is 100%.

Group of orthologs #537. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 P.pallidum:107

F6YHB0              	100.00%		D3B9P6              	100.00%
Bootstrap support for F6YHB0 as seed ortholog is 100%.
Bootstrap support for D3B9P6 as seed ortholog is 99%.

Group of orthologs #538. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.pallidum:18

H2Y3K9              	100.00%		D3B7L8              	100.00%
Bootstrap support for H2Y3K9 as seed ortholog is 100%.
Bootstrap support for D3B7L8 as seed ortholog is 71%.
Alternative seed ortholog is D3BQC7 (18 bits away from this cluster)

Group of orthologs #539. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 P.pallidum:353

F6QAR2              	100.00%		D3BSH8              	100.00%
F7BE54              	21.14%		
Bootstrap support for F6QAR2 as seed ortholog is 100%.
Bootstrap support for D3BSH8 as seed ortholog is 100%.

Group of orthologs #540. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 P.pallidum:353

F6X2C4              	100.00%		D3AZ74              	100.00%
Bootstrap support for F6X2C4 as seed ortholog is 100%.
Bootstrap support for D3AZ74 as seed ortholog is 100%.

Group of orthologs #541. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 P.pallidum:353

F6U3Q1              	100.00%		D3B5T9              	100.00%
Bootstrap support for F6U3Q1 as seed ortholog is 100%.
Bootstrap support for D3B5T9 as seed ortholog is 100%.

Group of orthologs #542. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 P.pallidum:353

F6SQF6              	100.00%		D3BEK9              	100.00%
Bootstrap support for F6SQF6 as seed ortholog is 100%.
Bootstrap support for D3BEK9 as seed ortholog is 100%.

Group of orthologs #543. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 P.pallidum:353

F6ZS66              	100.00%		D3B573              	100.00%
Bootstrap support for F6ZS66 as seed ortholog is 100%.
Bootstrap support for D3B573 as seed ortholog is 100%.

Group of orthologs #544. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 P.pallidum:352

H2XPX0              	100.00%		D3BMP8              	100.00%
                    	       		D3B338              	15.93%
Bootstrap support for H2XPX0 as seed ortholog is 100%.
Bootstrap support for D3BMP8 as seed ortholog is 100%.

Group of orthologs #545. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 P.pallidum:91

F6ZYB8              	100.00%		D3BCI4              	100.00%
Bootstrap support for F6ZYB8 as seed ortholog is 100%.
Bootstrap support for D3BCI4 as seed ortholog is 95%.

Group of orthologs #546. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 P.pallidum:246

F7A3E4              	100.00%		D3BBN9              	100.00%
Bootstrap support for F7A3E4 as seed ortholog is 100%.
Bootstrap support for D3BBN9 as seed ortholog is 100%.

Group of orthologs #547. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 P.pallidum:351

H2XVC3              	100.00%		D3B3M9              	100.00%
Bootstrap support for H2XVC3 as seed ortholog is 100%.
Bootstrap support for D3B3M9 as seed ortholog is 100%.

Group of orthologs #548. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 P.pallidum:351

H2XZC1              	100.00%		D3B2I1              	100.00%
Bootstrap support for H2XZC1 as seed ortholog is 99%.
Bootstrap support for D3B2I1 as seed ortholog is 100%.

Group of orthologs #549. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.pallidum:351

H2XYY6              	100.00%		D3B4T0              	100.00%
Bootstrap support for H2XYY6 as seed ortholog is 93%.
Bootstrap support for D3B4T0 as seed ortholog is 100%.

Group of orthologs #550. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.pallidum:203

F6WVT9              	100.00%		D3BJI2              	100.00%
F6QZH0              	9.09%		
Bootstrap support for F6WVT9 as seed ortholog is 99%.
Bootstrap support for D3BJI2 as seed ortholog is 99%.

Group of orthologs #551. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 P.pallidum:349

H2XKE2              	100.00%		D3AWY9              	100.00%
Bootstrap support for H2XKE2 as seed ortholog is 100%.
Bootstrap support for D3AWY9 as seed ortholog is 100%.

Group of orthologs #552. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 P.pallidum:349

H2Y0R2              	100.00%		D3B3A5              	100.00%
Bootstrap support for H2Y0R2 as seed ortholog is 100%.
Bootstrap support for D3B3A5 as seed ortholog is 100%.

Group of orthologs #553. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.pallidum:274

F6SIX8              	100.00%		D3B5L4              	100.00%
Bootstrap support for F6SIX8 as seed ortholog is 100%.
Bootstrap support for D3B5L4 as seed ortholog is 100%.

Group of orthologs #554. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 P.pallidum:348

F6UAZ6              	100.00%		D3BII7              	100.00%
Bootstrap support for F6UAZ6 as seed ortholog is 100%.
Bootstrap support for D3BII7 as seed ortholog is 100%.

Group of orthologs #555. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 P.pallidum:347

F7BDV2              	100.00%		D3B0D6              	100.00%
Bootstrap support for F7BDV2 as seed ortholog is 100%.
Bootstrap support for D3B0D6 as seed ortholog is 100%.

Group of orthologs #556. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 P.pallidum:347

F6YQR4              	100.00%		D3BAJ3              	100.00%
Bootstrap support for F6YQR4 as seed ortholog is 100%.
Bootstrap support for D3BAJ3 as seed ortholog is 100%.

Group of orthologs #557. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 P.pallidum:347

H2XRS8              	100.00%		D3BSQ8              	100.00%
Bootstrap support for H2XRS8 as seed ortholog is 99%.
Bootstrap support for D3BSQ8 as seed ortholog is 100%.

Group of orthologs #558. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 P.pallidum:347

H2Y0W9              	100.00%		D3BN39              	100.00%
Bootstrap support for H2Y0W9 as seed ortholog is 100%.
Bootstrap support for D3BN39 as seed ortholog is 100%.

Group of orthologs #559. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.pallidum:346

F7A6E1              	100.00%		D3AWC2              	100.00%
F7AQC2              	19.06%		
H2Y1L4              	7.95%		
Bootstrap support for F7A6E1 as seed ortholog is 87%.
Bootstrap support for D3AWC2 as seed ortholog is 100%.

Group of orthologs #560. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:48

F6X753              	100.00%		D3BDA2              	100.00%
L7N0R8              	12.80%		
Bootstrap support for F6X753 as seed ortholog is 91%.
Bootstrap support for D3BDA2 as seed ortholog is 77%.

Group of orthologs #561. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.pallidum:346

F6Q9C5              	100.00%		D3B0Z8              	100.00%
Bootstrap support for F6Q9C5 as seed ortholog is 100%.
Bootstrap support for D3B0Z8 as seed ortholog is 100%.

Group of orthologs #562. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 P.pallidum:346

F6XQ09              	100.00%		D3AWP9              	100.00%
Bootstrap support for F6XQ09 as seed ortholog is 100%.
Bootstrap support for D3AWP9 as seed ortholog is 100%.

Group of orthologs #563. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 P.pallidum:346

H2XWE4              	100.00%		D3B6G8              	100.00%
Bootstrap support for H2XWE4 as seed ortholog is 100%.
Bootstrap support for D3B6G8 as seed ortholog is 100%.

Group of orthologs #564. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.pallidum:346

F7BMB7              	100.00%		D3BQ12              	100.00%
Bootstrap support for F7BMB7 as seed ortholog is 100%.
Bootstrap support for D3BQ12 as seed ortholog is 100%.

Group of orthologs #565. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:144

Q4H3L5              	100.00%		D3BBN0              	100.00%
Bootstrap support for Q4H3L5 as seed ortholog is 99%.
Bootstrap support for D3BBN0 as seed ortholog is 99%.

Group of orthologs #566. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 P.pallidum:207

F6V055              	100.00%		D3BEB6              	100.00%
Bootstrap support for F6V055 as seed ortholog is 56%.
Alternative seed ortholog is F6SZ94 (9 bits away from this cluster)
Bootstrap support for D3BEB6 as seed ortholog is 99%.

Group of orthologs #567. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.pallidum:344

F6TC27              	100.00%		D3AZL0              	100.00%
Bootstrap support for F6TC27 as seed ortholog is 99%.
Bootstrap support for D3AZL0 as seed ortholog is 100%.

Group of orthologs #568. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:172

F6WL19              	100.00%		D3AVX5              	100.00%
F6TNW3              	12.10%		
Bootstrap support for F6WL19 as seed ortholog is 99%.
Bootstrap support for D3AVX5 as seed ortholog is 100%.

Group of orthologs #569. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 P.pallidum:180

F6W7N8              	100.00%		D3BS34              	100.00%
Bootstrap support for F6W7N8 as seed ortholog is 100%.
Bootstrap support for D3BS34 as seed ortholog is 99%.

Group of orthologs #570. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 P.pallidum:342

F6RN60              	100.00%		D3B3Z0              	100.00%
Bootstrap support for F6RN60 as seed ortholog is 100%.
Bootstrap support for D3B3Z0 as seed ortholog is 100%.

Group of orthologs #571. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 P.pallidum:342

F6WH82              	100.00%		D3AY60              	100.00%
Bootstrap support for F6WH82 as seed ortholog is 100%.
Bootstrap support for D3AY60 as seed ortholog is 100%.

Group of orthologs #572. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 P.pallidum:132

F6UGN5              	100.00%		D3B485              	100.00%
Bootstrap support for F6UGN5 as seed ortholog is 100%.
Bootstrap support for D3B485 as seed ortholog is 100%.

Group of orthologs #573. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.pallidum:342

F6VZQ1              	100.00%		D3BRV9              	100.00%
Bootstrap support for F6VZQ1 as seed ortholog is 99%.
Bootstrap support for D3BRV9 as seed ortholog is 100%.

Group of orthologs #574. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 P.pallidum:340

H2XL83              	100.00%		D3BQ29              	100.00%
Bootstrap support for H2XL83 as seed ortholog is 100%.
Bootstrap support for D3BQ29 as seed ortholog is 100%.

Group of orthologs #575. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 P.pallidum:339

F7B593              	100.00%		D3AXX5              	100.00%
Bootstrap support for F7B593 as seed ortholog is 100%.
Bootstrap support for D3AXX5 as seed ortholog is 100%.

Group of orthologs #576. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 P.pallidum:339

H2XLN7              	100.00%		D3AY55              	100.00%
Bootstrap support for H2XLN7 as seed ortholog is 100%.
Bootstrap support for D3AY55 as seed ortholog is 100%.

Group of orthologs #577. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 P.pallidum:339

F6ZDB4              	100.00%		D3BTJ5              	100.00%
Bootstrap support for F6ZDB4 as seed ortholog is 100%.
Bootstrap support for D3BTJ5 as seed ortholog is 100%.

Group of orthologs #578. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 P.pallidum:339

H2Y2L0              	100.00%		D3BLP1              	100.00%
Bootstrap support for H2Y2L0 as seed ortholog is 100%.
Bootstrap support for D3BLP1 as seed ortholog is 100%.

Group of orthologs #579. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 P.pallidum:337

F6Q041              	100.00%		D3B7A6              	100.00%
                    	       		D3BGE1              	27.69%
Bootstrap support for F6Q041 as seed ortholog is 100%.
Bootstrap support for D3B7A6 as seed ortholog is 100%.

Group of orthologs #580. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 P.pallidum:337

F6XRI7              	100.00%		D3AY53              	100.00%
Bootstrap support for F6XRI7 as seed ortholog is 100%.
Bootstrap support for D3AY53 as seed ortholog is 100%.

Group of orthologs #581. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 P.pallidum:337

F6VW40              	100.00%		D3B8L6              	100.00%
Bootstrap support for F6VW40 as seed ortholog is 100%.
Bootstrap support for D3B8L6 as seed ortholog is 100%.

Group of orthologs #582. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 P.pallidum:337

F6SSW4              	100.00%		D3BKN6              	100.00%
Bootstrap support for F6SSW4 as seed ortholog is 100%.
Bootstrap support for D3BKN6 as seed ortholog is 100%.

Group of orthologs #583. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 P.pallidum:337

F6XWY9              	100.00%		D3BKF9              	100.00%
Bootstrap support for F6XWY9 as seed ortholog is 100%.
Bootstrap support for D3BKF9 as seed ortholog is 100%.

Group of orthologs #584. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 P.pallidum:337

F6XMM6              	100.00%		D3BL83              	100.00%
Bootstrap support for F6XMM6 as seed ortholog is 100%.
Bootstrap support for D3BL83 as seed ortholog is 100%.

Group of orthologs #585. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 P.pallidum:43

F6U1K7              	100.00%		D3BV70              	100.00%
Bootstrap support for F6U1K7 as seed ortholog is 98%.
Bootstrap support for D3BV70 as seed ortholog is 76%.

Group of orthologs #586. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 P.pallidum:334

F6ZHS2              	100.00%		D3B4D7              	100.00%
Bootstrap support for F6ZHS2 as seed ortholog is 100%.
Bootstrap support for D3B4D7 as seed ortholog is 100%.

Group of orthologs #587. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 P.pallidum:334

F6RJV3              	100.00%		D3BP76              	100.00%
Bootstrap support for F6RJV3 as seed ortholog is 100%.
Bootstrap support for D3BP76 as seed ortholog is 100%.

Group of orthologs #588. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 P.pallidum:333

F6TMN3              	100.00%		D3B0Y0              	100.00%
Bootstrap support for F6TMN3 as seed ortholog is 100%.
Bootstrap support for D3B0Y0 as seed ortholog is 100%.

Group of orthologs #589. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 P.pallidum:331

F6ZHM4              	100.00%		D3AY97              	100.00%
Bootstrap support for F6ZHM4 as seed ortholog is 100%.
Bootstrap support for D3AY97 as seed ortholog is 100%.

Group of orthologs #590. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 P.pallidum:330

F6YEH2              	100.00%		D3B8C8              	100.00%
Bootstrap support for F6YEH2 as seed ortholog is 100%.
Bootstrap support for D3B8C8 as seed ortholog is 100%.

Group of orthologs #591. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 P.pallidum:330

F6SHZ7              	100.00%		D3BLH6              	100.00%
Bootstrap support for F6SHZ7 as seed ortholog is 100%.
Bootstrap support for D3BLH6 as seed ortholog is 100%.

Group of orthologs #592. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:330

F6ZBI9              	100.00%		D3B8S4              	100.00%
Bootstrap support for F6ZBI9 as seed ortholog is 95%.
Bootstrap support for D3B8S4 as seed ortholog is 100%.

Group of orthologs #593. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 P.pallidum:329

F6RKU1              	100.00%		D3BNP6              	100.00%
Bootstrap support for F6RKU1 as seed ortholog is 100%.
Bootstrap support for D3BNP6 as seed ortholog is 100%.

Group of orthologs #594. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 P.pallidum:101

F6W1A6              	100.00%		D3BF32              	100.00%
Bootstrap support for F6W1A6 as seed ortholog is 100%.
Bootstrap support for D3BF32 as seed ortholog is 99%.

Group of orthologs #595. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.pallidum:199

F6VP14              	100.00%		D3BTH5              	100.00%
Bootstrap support for F6VP14 as seed ortholog is 100%.
Bootstrap support for D3BTH5 as seed ortholog is 100%.

Group of orthologs #596. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 P.pallidum:328

F6VQ10              	100.00%		D3AXH6              	100.00%
Q4H2R2              	100.00%		
Bootstrap support for F6VQ10 as seed ortholog is 100%.
Bootstrap support for Q4H2R2 as seed ortholog is 100%.
Bootstrap support for D3AXH6 as seed ortholog is 100%.

Group of orthologs #597. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.pallidum:328

F6PNT4              	100.00%		D3B9G6              	100.00%
Bootstrap support for F6PNT4 as seed ortholog is 98%.
Bootstrap support for D3B9G6 as seed ortholog is 100%.

Group of orthologs #598. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 P.pallidum:328

F6Z3V6              	100.00%		D3BCD7              	100.00%
Bootstrap support for F6Z3V6 as seed ortholog is 100%.
Bootstrap support for D3BCD7 as seed ortholog is 100%.

Group of orthologs #599. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 P.pallidum:328

F7A172              	100.00%		D3BER0              	100.00%
Bootstrap support for F7A172 as seed ortholog is 100%.
Bootstrap support for D3BER0 as seed ortholog is 100%.

Group of orthologs #600. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 P.pallidum:75

F6RMI2              	100.00%		D3B6P2              	100.00%
                    	       		D3BKL3              	56.00%
Bootstrap support for F6RMI2 as seed ortholog is 100%.
Bootstrap support for D3B6P2 as seed ortholog is 84%.

Group of orthologs #601. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 P.pallidum:327

F6UQJ9              	100.00%		D3BBF8              	100.00%
Bootstrap support for F6UQJ9 as seed ortholog is 100%.
Bootstrap support for D3BBF8 as seed ortholog is 100%.

Group of orthologs #602. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 P.pallidum:139

F7BLL7              	100.00%		D3B7Y7              	100.00%
Bootstrap support for F7BLL7 as seed ortholog is 100%.
Bootstrap support for D3B7Y7 as seed ortholog is 99%.

Group of orthologs #603. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 P.pallidum:327

H2XR08              	100.00%		D3B2U7              	100.00%
Bootstrap support for H2XR08 as seed ortholog is 100%.
Bootstrap support for D3B2U7 as seed ortholog is 100%.

Group of orthologs #604. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 P.pallidum:327

F6YM78              	100.00%		D3BU70              	100.00%
Bootstrap support for F6YM78 as seed ortholog is 100%.
Bootstrap support for D3BU70 as seed ortholog is 100%.

Group of orthologs #605. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 P.pallidum:46

F6VMS4              	100.00%		D3AZQ1              	100.00%
Bootstrap support for F6VMS4 as seed ortholog is 100%.
Bootstrap support for D3AZQ1 as seed ortholog is 78%.

Group of orthologs #606. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 P.pallidum:202

F6S8Z0              	100.00%		D3B972              	100.00%
Bootstrap support for F6S8Z0 as seed ortholog is 100%.
Bootstrap support for D3B972 as seed ortholog is 100%.

Group of orthologs #607. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 P.pallidum:326

F6YT91              	100.00%		D3B4T9              	100.00%
Bootstrap support for F6YT91 as seed ortholog is 100%.
Bootstrap support for D3B4T9 as seed ortholog is 100%.

Group of orthologs #608. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 P.pallidum:326

F7BHB2              	100.00%		D3B1Q0              	100.00%
Bootstrap support for F7BHB2 as seed ortholog is 100%.
Bootstrap support for D3B1Q0 as seed ortholog is 100%.

Group of orthologs #609. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 P.pallidum:229

F6WIG7              	100.00%		D3AVM8              	100.00%
Bootstrap support for F6WIG7 as seed ortholog is 100%.
Bootstrap support for D3AVM8 as seed ortholog is 99%.

Group of orthologs #610. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 P.pallidum:325

F6UGC2              	100.00%		D3BMT7              	100.00%
Bootstrap support for F6UGC2 as seed ortholog is 100%.
Bootstrap support for D3BMT7 as seed ortholog is 100%.

Group of orthologs #611. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.pallidum:137

F6ZCE0              	100.00%		D3BSW5              	100.00%
Bootstrap support for F6ZCE0 as seed ortholog is 99%.
Bootstrap support for D3BSW5 as seed ortholog is 99%.

Group of orthologs #612. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 P.pallidum:32

Q7YT79              	100.00%		D3BKF3              	100.00%
F6PNQ0              	16.67%		
Bootstrap support for Q7YT79 as seed ortholog is 92%.
Bootstrap support for D3BKF3 as seed ortholog is 94%.

Group of orthologs #613. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.pallidum:22

F6WNH9              	100.00%		D3B5R2              	100.00%
Bootstrap support for F6WNH9 as seed ortholog is 99%.
Bootstrap support for D3B5R2 as seed ortholog is 83%.

Group of orthologs #614. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 P.pallidum:324

H2Y3Q6              	100.00%		D3B0J0              	100.00%
Bootstrap support for H2Y3Q6 as seed ortholog is 100%.
Bootstrap support for D3B0J0 as seed ortholog is 100%.

Group of orthologs #615. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 P.pallidum:323

F6Q2U2              	100.00%		D3BN92              	100.00%
Bootstrap support for F6Q2U2 as seed ortholog is 100%.
Bootstrap support for D3BN92 as seed ortholog is 100%.

Group of orthologs #616. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 P.pallidum:323

H2Y164              	100.00%		D3BRX2              	100.00%
Bootstrap support for H2Y164 as seed ortholog is 100%.
Bootstrap support for D3BRX2 as seed ortholog is 100%.

Group of orthologs #617. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:322

F6RKK1              	100.00%		D3B110              	100.00%
Bootstrap support for F6RKK1 as seed ortholog is 95%.
Bootstrap support for D3B110 as seed ortholog is 100%.

Group of orthologs #618. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 P.pallidum:322

F7ATT1              	100.00%		D3B3W9              	100.00%
Bootstrap support for F7ATT1 as seed ortholog is 100%.
Bootstrap support for D3B3W9 as seed ortholog is 100%.

Group of orthologs #619. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 P.pallidum:322

F7AEY7              	100.00%		D3BIF2              	100.00%
Bootstrap support for F7AEY7 as seed ortholog is 100%.
Bootstrap support for D3BIF2 as seed ortholog is 100%.

Group of orthologs #620. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 P.pallidum:322

F7APB5              	100.00%		D3BT59              	100.00%
Bootstrap support for F7APB5 as seed ortholog is 100%.
Bootstrap support for D3BT59 as seed ortholog is 100%.

Group of orthologs #621. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 P.pallidum:321

F7BKI5              	100.00%		D3B8T4              	100.00%
Bootstrap support for F7BKI5 as seed ortholog is 100%.
Bootstrap support for D3B8T4 as seed ortholog is 100%.

Group of orthologs #622. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.pallidum:63

F7AZI8              	100.00%		D3BAT3              	100.00%
Bootstrap support for F7AZI8 as seed ortholog is 91%.
Bootstrap support for D3BAT3 as seed ortholog is 97%.

Group of orthologs #623. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 P.pallidum:320

H2XK75              	100.00%		D3BHW4              	100.00%
Bootstrap support for H2XK75 as seed ortholog is 100%.
Bootstrap support for D3BHW4 as seed ortholog is 100%.

Group of orthologs #624. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.pallidum:320

Q1RL34              	100.00%		D3BL62              	100.00%
Bootstrap support for Q1RL34 as seed ortholog is 86%.
Bootstrap support for D3BL62 as seed ortholog is 100%.

Group of orthologs #625. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 P.pallidum:319

F6Q0S7              	100.00%		D3AXK7              	100.00%
Bootstrap support for F6Q0S7 as seed ortholog is 100%.
Bootstrap support for D3AXK7 as seed ortholog is 100%.

Group of orthologs #626. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 P.pallidum:319

F6TFE2              	100.00%		D3B4H2              	100.00%
Bootstrap support for F6TFE2 as seed ortholog is 100%.
Bootstrap support for D3B4H2 as seed ortholog is 100%.

Group of orthologs #627. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.pallidum:225

F6WWK0              	100.00%		D3B0J9              	100.00%
Bootstrap support for F6WWK0 as seed ortholog is 100%.
Bootstrap support for D3B0J9 as seed ortholog is 100%.

Group of orthologs #628. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 P.pallidum:319

F6X7U3              	100.00%		D3BCR7              	100.00%
Bootstrap support for F6X7U3 as seed ortholog is 100%.
Bootstrap support for D3BCR7 as seed ortholog is 100%.

Group of orthologs #629. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 P.pallidum:17

F6UKS5              	100.00%		D3BPY7              	100.00%
Bootstrap support for F6UKS5 as seed ortholog is 100%.
Bootstrap support for D3BPY7 as seed ortholog is 50%.
Alternative seed ortholog is D3BRX3 (17 bits away from this cluster)

Group of orthologs #630. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.pallidum:76

F7BAF2              	100.00%		D3BR11              	100.00%
F6VIT0              	7.96%		
F6QB79              	7.71%		
F6RWK5              	5.87%		
Bootstrap support for F7BAF2 as seed ortholog is 86%.
Bootstrap support for D3BR11 as seed ortholog is 94%.

Group of orthologs #631. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 P.pallidum:318

F6TSV6              	100.00%		D3BJU0              	100.00%
Bootstrap support for F6TSV6 as seed ortholog is 100%.
Bootstrap support for D3BJU0 as seed ortholog is 100%.

Group of orthologs #632. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 P.pallidum:318

H2XQ25              	100.00%		D3B3Q8              	100.00%
Bootstrap support for H2XQ25 as seed ortholog is 100%.
Bootstrap support for D3B3Q8 as seed ortholog is 100%.

Group of orthologs #633. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 P.pallidum:318

F6Z2W9              	100.00%		D3BV77              	100.00%
Bootstrap support for F6Z2W9 as seed ortholog is 100%.
Bootstrap support for D3BV77 as seed ortholog is 100%.

Group of orthologs #634. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 P.pallidum:317

F6T5V5              	100.00%		D3BK83              	100.00%
                    	       		D3BK82              	52.48%
Bootstrap support for F6T5V5 as seed ortholog is 100%.
Bootstrap support for D3BK83 as seed ortholog is 100%.

Group of orthologs #635. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:110

F6R4H2              	100.00%		D3BDH0              	100.00%
Bootstrap support for F6R4H2 as seed ortholog is 95%.
Bootstrap support for D3BDH0 as seed ortholog is 99%.

Group of orthologs #636. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 P.pallidum:317

F6V8N9              	100.00%		D3B886              	100.00%
Bootstrap support for F6V8N9 as seed ortholog is 100%.
Bootstrap support for D3B886 as seed ortholog is 100%.

Group of orthologs #637. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 P.pallidum:317

H2XKA9              	100.00%		D3BSU4              	100.00%
Bootstrap support for H2XKA9 as seed ortholog is 100%.
Bootstrap support for D3BSU4 as seed ortholog is 100%.

Group of orthologs #638. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 P.pallidum:316

F6SQQ1              	100.00%		D3BKY4              	100.00%
Bootstrap support for F6SQQ1 as seed ortholog is 100%.
Bootstrap support for D3BKY4 as seed ortholog is 100%.

Group of orthologs #639. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 P.pallidum:316

F7BDH1              	100.00%		D3BLX9              	100.00%
Bootstrap support for F7BDH1 as seed ortholog is 100%.
Bootstrap support for D3BLX9 as seed ortholog is 100%.

Group of orthologs #640. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 P.pallidum:315

F6VN41              	100.00%		D3B7T3              	100.00%
Bootstrap support for F6VN41 as seed ortholog is 100%.
Bootstrap support for D3B7T3 as seed ortholog is 100%.

Group of orthologs #641. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 P.pallidum:315

F6S8S3              	100.00%		D3BGB9              	100.00%
Bootstrap support for F6S8S3 as seed ortholog is 100%.
Bootstrap support for D3BGB9 as seed ortholog is 100%.

Group of orthologs #642. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.pallidum:314

F6YG66              	100.00%		D3B4Z8              	100.00%
                    	       		D3BHS8              	13.26%
Bootstrap support for F6YG66 as seed ortholog is 97%.
Bootstrap support for D3B4Z8 as seed ortholog is 100%.

Group of orthologs #643. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 P.pallidum:314

F6ZN98              	100.00%		D3AZB4              	100.00%
Bootstrap support for F6ZN98 as seed ortholog is 100%.
Bootstrap support for D3AZB4 as seed ortholog is 100%.

Group of orthologs #644. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 P.pallidum:313

F6YM02              	100.00%		D3B2J9              	100.00%
Bootstrap support for F6YM02 as seed ortholog is 100%.
Bootstrap support for D3B2J9 as seed ortholog is 100%.

Group of orthologs #645. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 P.pallidum:313

H2Y395              	100.00%		D3BA00              	100.00%
Bootstrap support for H2Y395 as seed ortholog is 100%.
Bootstrap support for D3BA00 as seed ortholog is 100%.

Group of orthologs #646. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.pallidum:85

F6S360              	100.00%		D3B388              	100.00%
Bootstrap support for F6S360 as seed ortholog is 100%.
Bootstrap support for D3B388 as seed ortholog is 99%.

Group of orthologs #647. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 P.pallidum:236

F6VXM8              	100.00%		D3AYA4              	100.00%
Bootstrap support for F6VXM8 as seed ortholog is 100%.
Bootstrap support for D3AYA4 as seed ortholog is 100%.

Group of orthologs #648. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 P.pallidum:244

F6TTI3              	100.00%		D3B9R2              	100.00%
Bootstrap support for F6TTI3 as seed ortholog is 100%.
Bootstrap support for D3B9R2 as seed ortholog is 100%.

Group of orthologs #649. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.pallidum:10

F6T724              	100.00%		D3BJ60              	100.00%
F6T6J2              	22.39%		D3AXL6              	22.78%
F6T6I0              	16.03%		D3BB03              	12.50%
F6T6N4              	11.20%		D3BL12              	11.25%
                    	       		D3BUN6              	10.97%
                    	       		D3BKJ7              	7.50%
                    	       		D3BB13              	5.56%
Bootstrap support for F6T724 as seed ortholog is 99%.
Bootstrap support for D3BJ60 as seed ortholog is 63%.
Alternative seed ortholog is D3B6N0 (10 bits away from this cluster)

Group of orthologs #650. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 P.pallidum:310

F6WYT3              	100.00%		D3B913              	100.00%
H2XRA0              	10.03%		
Bootstrap support for F6WYT3 as seed ortholog is 100%.
Bootstrap support for D3B913 as seed ortholog is 100%.

Group of orthologs #651. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.pallidum:131

F6TDZ5              	100.00%		D3BL25              	100.00%
Bootstrap support for F6TDZ5 as seed ortholog is 97%.
Bootstrap support for D3BL25 as seed ortholog is 97%.

Group of orthologs #652. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 P.pallidum:310

F6ZZH3              	100.00%		D3BEZ3              	100.00%
Bootstrap support for F6ZZH3 as seed ortholog is 100%.
Bootstrap support for D3BEZ3 as seed ortholog is 100%.

Group of orthologs #653. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 P.pallidum:309

H2XUA5              	100.00%		D3AVU4              	100.00%
Bootstrap support for H2XUA5 as seed ortholog is 100%.
Bootstrap support for D3AVU4 as seed ortholog is 100%.

Group of orthologs #654. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 P.pallidum:147

F6VG38              	100.00%		D3BJP6              	100.00%
Bootstrap support for F6VG38 as seed ortholog is 100%.
Bootstrap support for D3BJP6 as seed ortholog is 100%.

Group of orthologs #655. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 P.pallidum:130

F6X4N7              	100.00%		D3BM76              	100.00%
Bootstrap support for F6X4N7 as seed ortholog is 100%.
Bootstrap support for D3BM76 as seed ortholog is 99%.

Group of orthologs #656. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 P.pallidum:308

F6Z672              	100.00%		D3BKM5              	100.00%
Bootstrap support for F6Z672 as seed ortholog is 100%.
Bootstrap support for D3BKM5 as seed ortholog is 100%.

Group of orthologs #657. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 P.pallidum:35

F6SHN0              	100.00%		D3B3L6              	100.00%
F6TSK2              	57.35%		D3BKX9              	32.09%
                    	       		D3B3L7              	29.24%
                    	       		D3B4G1              	6.32%
Bootstrap support for F6SHN0 as seed ortholog is 100%.
Bootstrap support for D3B3L6 as seed ortholog is 77%.

Group of orthologs #658. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 P.pallidum:247

F6QDG1              	100.00%		D3B5D0              	100.00%
Bootstrap support for F6QDG1 as seed ortholog is 100%.
Bootstrap support for D3B5D0 as seed ortholog is 100%.

Group of orthologs #659. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 P.pallidum:307

F6VZ84              	100.00%		D3B3F5              	100.00%
Bootstrap support for F6VZ84 as seed ortholog is 100%.
Bootstrap support for D3B3F5 as seed ortholog is 100%.

Group of orthologs #660. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 P.pallidum:219

F7ALM5              	100.00%		D3B2I6              	100.00%
Bootstrap support for F7ALM5 as seed ortholog is 100%.
Bootstrap support for D3B2I6 as seed ortholog is 100%.

Group of orthologs #661. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 P.pallidum:307

F6XWN6              	100.00%		D3BQQ9              	100.00%
Bootstrap support for F6XWN6 as seed ortholog is 100%.
Bootstrap support for D3BQQ9 as seed ortholog is 100%.

Group of orthologs #662. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 P.pallidum:306

F6XVH7              	100.00%		D3B632              	100.00%
Bootstrap support for F6XVH7 as seed ortholog is 100%.
Bootstrap support for D3B632 as seed ortholog is 100%.

Group of orthologs #663. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 P.pallidum:149

F6T0J5              	100.00%		D3BM08              	100.00%
Bootstrap support for F6T0J5 as seed ortholog is 100%.
Bootstrap support for D3BM08 as seed ortholog is 100%.

Group of orthologs #664. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 P.pallidum:306

F6YDG1              	100.00%		D3BDT3              	100.00%
Bootstrap support for F6YDG1 as seed ortholog is 100%.
Bootstrap support for D3BDT3 as seed ortholog is 100%.

Group of orthologs #665. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 P.pallidum:165

H2XVD0              	100.00%		D3B4Z4              	100.00%
Bootstrap support for H2XVD0 as seed ortholog is 100%.
Bootstrap support for D3B4Z4 as seed ortholog is 99%.

Group of orthologs #666. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 P.pallidum:69

H2Y040              	100.00%		D3B3T9              	100.00%
Bootstrap support for H2Y040 as seed ortholog is 88%.
Bootstrap support for D3B3T9 as seed ortholog is 99%.

Group of orthologs #667. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.pallidum:132

F6XT60              	100.00%		D3BUX2              	100.00%
Bootstrap support for F6XT60 as seed ortholog is 99%.
Bootstrap support for D3BUX2 as seed ortholog is 100%.

Group of orthologs #668. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.pallidum:15

H2XL87              	100.00%		D3BP55              	100.00%
Bootstrap support for H2XL87 as seed ortholog is 99%.
Bootstrap support for D3BP55 as seed ortholog is 73%.
Alternative seed ortholog is D3BLV3 (15 bits away from this cluster)

Group of orthologs #669. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 P.pallidum:306

H2XVS8              	100.00%		D3BM29              	100.00%
Bootstrap support for H2XVS8 as seed ortholog is 100%.
Bootstrap support for D3BM29 as seed ortholog is 100%.

Group of orthologs #670. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 P.pallidum:305

F6VC80              	100.00%		D3BT14              	100.00%
Bootstrap support for F6VC80 as seed ortholog is 100%.
Bootstrap support for D3BT14 as seed ortholog is 100%.

Group of orthologs #671. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.pallidum:111

F6VMY2              	100.00%		D3B3M6              	100.00%
Bootstrap support for F6VMY2 as seed ortholog is 99%.
Bootstrap support for D3B3M6 as seed ortholog is 100%.

Group of orthologs #672. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 P.pallidum:304

F6WAW7              	100.00%		D3BK44              	100.00%
Bootstrap support for F6WAW7 as seed ortholog is 100%.
Bootstrap support for D3BK44 as seed ortholog is 100%.

Group of orthologs #673. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 P.pallidum:304

F6YYY1              	100.00%		D3BII8              	100.00%
Bootstrap support for F6YYY1 as seed ortholog is 100%.
Bootstrap support for D3BII8 as seed ortholog is 100%.

Group of orthologs #674. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.pallidum:304

F6ZRT4              	100.00%		D3BMW4              	100.00%
Bootstrap support for F6ZRT4 as seed ortholog is 95%.
Bootstrap support for D3BMW4 as seed ortholog is 100%.

Group of orthologs #675. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 P.pallidum:303

F6VL61              	100.00%		D3B3X6              	100.00%
F6VKS9              	20.48%		
Bootstrap support for F6VL61 as seed ortholog is 100%.
Bootstrap support for D3B3X6 as seed ortholog is 100%.

Group of orthologs #676. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 P.pallidum:173

F6ZU35              	100.00%		D3BP67              	100.00%
Bootstrap support for F6ZU35 as seed ortholog is 100%.
Bootstrap support for D3BP67 as seed ortholog is 99%.

Group of orthologs #677. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 P.pallidum:55

K9J6P5              	100.00%		D3B280              	100.00%
F7AYD9              	63.91%		
Bootstrap support for K9J6P5 as seed ortholog is 85%.
Bootstrap support for D3B280 as seed ortholog is 96%.

Group of orthologs #678. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 P.pallidum:302

F6PWP3              	100.00%		D3B114              	100.00%
Bootstrap support for F6PWP3 as seed ortholog is 100%.
Bootstrap support for D3B114 as seed ortholog is 100%.

Group of orthologs #679. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 P.pallidum:261

H2XVD5              	100.00%		D3B0N9              	100.00%
Bootstrap support for H2XVD5 as seed ortholog is 100%.
Bootstrap support for D3B0N9 as seed ortholog is 100%.

Group of orthologs #680. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 P.pallidum:301

F6THM1              	100.00%		D3AZG7              	100.00%
Bootstrap support for F6THM1 as seed ortholog is 100%.
Bootstrap support for D3AZG7 as seed ortholog is 100%.

Group of orthologs #681. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 P.pallidum:93

F6S4F7              	100.00%		D3BIR2              	100.00%
Bootstrap support for F6S4F7 as seed ortholog is 64%.
Alternative seed ortholog is F6PH07 (13 bits away from this cluster)
Bootstrap support for D3BIR2 as seed ortholog is 99%.

Group of orthologs #682. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.pallidum:301

F6R5L0              	100.00%		D3BTS5              	100.00%
Bootstrap support for F6R5L0 as seed ortholog is 98%.
Bootstrap support for D3BTS5 as seed ortholog is 100%.

Group of orthologs #683. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.pallidum:160

F6U1L2              	100.00%		D3BNV2              	100.00%
Bootstrap support for F6U1L2 as seed ortholog is 97%.
Bootstrap support for D3BNV2 as seed ortholog is 99%.

Group of orthologs #684. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 P.pallidum:301

F7B391              	100.00%		D3BEQ8              	100.00%
Bootstrap support for F7B391 as seed ortholog is 100%.
Bootstrap support for D3BEQ8 as seed ortholog is 100%.

Group of orthologs #685. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.pallidum:217

F6RKQ2              	100.00%		D3B725              	100.00%
Bootstrap support for F6RKQ2 as seed ortholog is 100%.
Bootstrap support for D3B725 as seed ortholog is 100%.

Group of orthologs #686. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 P.pallidum:133

F6YKR1              	100.00%		D3B1Y0              	100.00%
Bootstrap support for F6YKR1 as seed ortholog is 100%.
Bootstrap support for D3B1Y0 as seed ortholog is 99%.

Group of orthologs #687. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 P.pallidum:300

F6SDM6              	100.00%		D3BJR7              	100.00%
Bootstrap support for F6SDM6 as seed ortholog is 100%.
Bootstrap support for D3BJR7 as seed ortholog is 100%.

Group of orthologs #688. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 P.pallidum:300

H2Y3D5              	100.00%		D3BQM3              	100.00%
Bootstrap support for H2Y3D5 as seed ortholog is 100%.
Bootstrap support for D3BQM3 as seed ortholog is 100%.

Group of orthologs #689. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.pallidum:93

F6SKG8              	100.00%		D3BEJ2              	100.00%
                    	       		D3BP50              	8.28%
                    	       		D3B270              	5.23%
Bootstrap support for F6SKG8 as seed ortholog is 99%.
Bootstrap support for D3BEJ2 as seed ortholog is 97%.

Group of orthologs #690. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 P.pallidum:299

F6SS61              	100.00%		D3B206              	100.00%
Bootstrap support for F6SS61 as seed ortholog is 100%.
Bootstrap support for D3B206 as seed ortholog is 100%.

Group of orthologs #691. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 P.pallidum:96

F6Z0V8              	100.00%		D3B4M8              	100.00%
Bootstrap support for F6Z0V8 as seed ortholog is 59%.
Alternative seed ortholog is F6QBJ1 (8 bits away from this cluster)
Bootstrap support for D3B4M8 as seed ortholog is 98%.

Group of orthologs #692. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 P.pallidum:299

F6YTX7              	100.00%		D3B6E5              	100.00%
Bootstrap support for F6YTX7 as seed ortholog is 100%.
Bootstrap support for D3B6E5 as seed ortholog is 100%.

Group of orthologs #693. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 P.pallidum:147

F6Z491              	100.00%		D3BBN6              	100.00%
Bootstrap support for F6Z491 as seed ortholog is 100%.
Bootstrap support for D3BBN6 as seed ortholog is 100%.

Group of orthologs #694. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.pallidum:82

F6ZP71              	100.00%		D3BR25              	100.00%
Bootstrap support for F6ZP71 as seed ortholog is 99%.
Bootstrap support for D3BR25 as seed ortholog is 97%.

Group of orthologs #695. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 P.pallidum:299

H2XYW0              	100.00%		D3BQZ8              	100.00%
Bootstrap support for H2XYW0 as seed ortholog is 100%.
Bootstrap support for D3BQZ8 as seed ortholog is 100%.

Group of orthologs #696. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.pallidum:299

H2Y323              	100.00%		D3BNZ1              	100.00%
Bootstrap support for H2Y323 as seed ortholog is 93%.
Bootstrap support for D3BNZ1 as seed ortholog is 100%.

Group of orthologs #697. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 P.pallidum:233

F6TQG1              	100.00%		D3B8K6              	100.00%
Bootstrap support for F6TQG1 as seed ortholog is 100%.
Bootstrap support for D3B8K6 as seed ortholog is 100%.

Group of orthologs #698. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.pallidum:297

F7A0H4              	100.00%		D3B961              	100.00%
F6VCE5              	57.02%		
F6UTV8              	6.43%		
Bootstrap support for F7A0H4 as seed ortholog is 99%.
Bootstrap support for D3B961 as seed ortholog is 100%.

Group of orthologs #699. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 P.pallidum:297

F6SID0              	100.00%		D3AVQ5              	100.00%
Bootstrap support for F6SID0 as seed ortholog is 100%.
Bootstrap support for D3AVQ5 as seed ortholog is 100%.

Group of orthologs #700. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 P.pallidum:297

F6RA92              	100.00%		D3B4U3              	100.00%
Bootstrap support for F6RA92 as seed ortholog is 100%.
Bootstrap support for D3B4U3 as seed ortholog is 100%.

Group of orthologs #701. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 P.pallidum:297

F6RC25              	100.00%		D3B6G7              	100.00%
Bootstrap support for F6RC25 as seed ortholog is 100%.
Bootstrap support for D3B6G7 as seed ortholog is 100%.

Group of orthologs #702. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 P.pallidum:297

F6VAT4              	100.00%		D3BIK1              	100.00%
Bootstrap support for F6VAT4 as seed ortholog is 100%.
Bootstrap support for D3BIK1 as seed ortholog is 100%.

Group of orthologs #703. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 P.pallidum:297

F7B6E8              	100.00%		D3BI88              	100.00%
Bootstrap support for F7B6E8 as seed ortholog is 100%.
Bootstrap support for D3BI88 as seed ortholog is 100%.

Group of orthologs #704. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 P.pallidum:297

H2XV68              	100.00%		D3BIY8              	100.00%
Bootstrap support for H2XV68 as seed ortholog is 100%.
Bootstrap support for D3BIY8 as seed ortholog is 100%.

Group of orthologs #705. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.pallidum:150

F6Z7W1              	100.00%		D3BFF7              	100.00%
Bootstrap support for F6Z7W1 as seed ortholog is 98%.
Bootstrap support for D3BFF7 as seed ortholog is 99%.

Group of orthologs #706. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 P.pallidum:194

F6VEB2              	100.00%		D3BTD3              	100.00%
Bootstrap support for F6VEB2 as seed ortholog is 100%.
Bootstrap support for D3BTD3 as seed ortholog is 100%.

Group of orthologs #707. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 P.pallidum:295

F6TGX7              	100.00%		D3BAC3              	100.00%
Bootstrap support for F6TGX7 as seed ortholog is 100%.
Bootstrap support for D3BAC3 as seed ortholog is 100%.

Group of orthologs #708. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 P.pallidum:295

F7AA18              	100.00%		D3AW43              	100.00%
Bootstrap support for F7AA18 as seed ortholog is 100%.
Bootstrap support for D3AW43 as seed ortholog is 100%.

Group of orthologs #709. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 P.pallidum:295

F6VCG5              	100.00%		D3B8S5              	100.00%
Bootstrap support for F6VCG5 as seed ortholog is 100%.
Bootstrap support for D3B8S5 as seed ortholog is 100%.

Group of orthologs #710. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 P.pallidum:295

F6UE78              	100.00%		D3BUH6              	100.00%
Bootstrap support for F6UE78 as seed ortholog is 100%.
Bootstrap support for D3BUH6 as seed ortholog is 100%.

Group of orthologs #711. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 P.pallidum:295

H2Y3R2              	100.00%		D3AZK7              	100.00%
Bootstrap support for H2Y3R2 as seed ortholog is 100%.
Bootstrap support for D3AZK7 as seed ortholog is 100%.

Group of orthologs #712. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 P.pallidum:206

H2XZ35              	100.00%		D3BQQ3              	100.00%
Bootstrap support for H2XZ35 as seed ortholog is 99%.
Bootstrap support for D3BQQ3 as seed ortholog is 100%.

Group of orthologs #713. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 P.pallidum:294

F6SSM8              	100.00%		D3BJC7              	100.00%
Bootstrap support for F6SSM8 as seed ortholog is 100%.
Bootstrap support for D3BJC7 as seed ortholog is 100%.

Group of orthologs #714. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 P.pallidum:294

F6T8Y3              	100.00%		D3BTG9              	100.00%
Bootstrap support for F6T8Y3 as seed ortholog is 100%.
Bootstrap support for D3BTG9 as seed ortholog is 100%.

Group of orthologs #715. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 P.pallidum:294

F6Y444              	100.00%		D3BIP9              	100.00%
Bootstrap support for F6Y444 as seed ortholog is 100%.
Bootstrap support for D3BIP9 as seed ortholog is 100%.

Group of orthologs #716. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 P.pallidum:294

F6Z0U1              	100.00%		D3BVM9              	100.00%
Bootstrap support for F6Z0U1 as seed ortholog is 100%.
Bootstrap support for D3BVM9 as seed ortholog is 100%.

Group of orthologs #717. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 P.pallidum:294

F7B5B2              	100.00%		D3BRI8              	100.00%
Bootstrap support for F7B5B2 as seed ortholog is 100%.
Bootstrap support for D3BRI8 as seed ortholog is 100%.

Group of orthologs #718. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 P.pallidum:293

F6S7I2              	100.00%		D3AXW5              	100.00%
Bootstrap support for F6S7I2 as seed ortholog is 100%.
Bootstrap support for D3AXW5 as seed ortholog is 100%.

Group of orthologs #719. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 P.pallidum:293

F6WFL4              	100.00%		D3B3X7              	100.00%
Bootstrap support for F6WFL4 as seed ortholog is 100%.
Bootstrap support for D3B3X7 as seed ortholog is 100%.

Group of orthologs #720. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 P.pallidum:293

F7AI93              	100.00%		D3B3U3              	100.00%
Bootstrap support for F7AI93 as seed ortholog is 100%.
Bootstrap support for D3B3U3 as seed ortholog is 100%.

Group of orthologs #721. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 P.pallidum:293

F7ACM5              	100.00%		D3BMU1              	100.00%
Bootstrap support for F7ACM5 as seed ortholog is 100%.
Bootstrap support for D3BMU1 as seed ortholog is 100%.

Group of orthologs #722. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 P.pallidum:292

Q6XV77              	100.00%		D3AXZ6              	100.00%
Q6XZ10              	21.03%		
Q6XZ09              	19.50%		
Bootstrap support for Q6XV77 as seed ortholog is 100%.
Bootstrap support for D3AXZ6 as seed ortholog is 100%.

Group of orthologs #723. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 P.pallidum:292

F6ZX12              	100.00%		D3B0H6              	100.00%
Bootstrap support for F6ZX12 as seed ortholog is 100%.
Bootstrap support for D3B0H6 as seed ortholog is 100%.

Group of orthologs #724. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 P.pallidum:292

F6XDT3              	100.00%		D3B9J0              	100.00%
Bootstrap support for F6XDT3 as seed ortholog is 100%.
Bootstrap support for D3B9J0 as seed ortholog is 100%.

Group of orthologs #725. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 P.pallidum:292

F6TPA2              	100.00%		D3BLC2              	100.00%
Bootstrap support for F6TPA2 as seed ortholog is 100%.
Bootstrap support for D3BLC2 as seed ortholog is 100%.

Group of orthologs #726. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 P.pallidum:292

F7BH80              	100.00%		D3BSV5              	100.00%
Bootstrap support for F7BH80 as seed ortholog is 100%.
Bootstrap support for D3BSV5 as seed ortholog is 100%.

Group of orthologs #727. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 P.pallidum:291

F6PPC0              	100.00%		D3BFU2              	100.00%
Bootstrap support for F6PPC0 as seed ortholog is 100%.
Bootstrap support for D3BFU2 as seed ortholog is 100%.

Group of orthologs #728. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 P.pallidum:291

F6ZW39              	100.00%		D3AY66              	100.00%
Bootstrap support for F6ZW39 as seed ortholog is 100%.
Bootstrap support for D3AY66 as seed ortholog is 100%.

Group of orthologs #729. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 P.pallidum:18

F7BAT7              	100.00%		D3BII4              	100.00%
Bootstrap support for F7BAT7 as seed ortholog is 100%.
Bootstrap support for D3BII4 as seed ortholog is 75%.

Group of orthologs #730. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.pallidum:290

F6WJQ9              	100.00%		D3B6L9              	100.00%
Bootstrap support for F6WJQ9 as seed ortholog is 99%.
Bootstrap support for D3B6L9 as seed ortholog is 100%.

Group of orthologs #731. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.pallidum:127

H2XTS9              	100.00%		D3BCQ0              	100.00%
Bootstrap support for H2XTS9 as seed ortholog is 99%.
Bootstrap support for D3BCQ0 as seed ortholog is 99%.

Group of orthologs #732. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.pallidum:290

F7B2Q7              	100.00%		D3BUZ2              	100.00%
Bootstrap support for F7B2Q7 as seed ortholog is 96%.
Bootstrap support for D3BUZ2 as seed ortholog is 100%.

Group of orthologs #733. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.pallidum:188

F6XBC5              	100.00%		D3AWZ0              	100.00%
Bootstrap support for F6XBC5 as seed ortholog is 100%.
Bootstrap support for D3AWZ0 as seed ortholog is 100%.

Group of orthologs #734. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 P.pallidum:289

F6SFP2              	100.00%		D3BST6              	100.00%
Bootstrap support for F6SFP2 as seed ortholog is 59%.
Alternative seed ortholog is F6XGL3 (10 bits away from this cluster)
Bootstrap support for D3BST6 as seed ortholog is 100%.

Group of orthologs #735. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 P.pallidum:289

F6W713              	100.00%		D3BNL4              	100.00%
Bootstrap support for F6W713 as seed ortholog is 100%.
Bootstrap support for D3BNL4 as seed ortholog is 100%.

Group of orthologs #736. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 P.pallidum:164

F7B860              	100.00%		D3BL30              	100.00%
Bootstrap support for F7B860 as seed ortholog is 100%.
Bootstrap support for D3BL30 as seed ortholog is 100%.

Group of orthologs #737. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 P.pallidum:168

F7BK08              	100.00%		D3BL98              	100.00%
Bootstrap support for F7BK08 as seed ortholog is 100%.
Bootstrap support for D3BL98 as seed ortholog is 99%.

Group of orthologs #738. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 P.pallidum:288

F6ZLM3              	100.00%		D3AX76              	100.00%
Bootstrap support for F6ZLM3 as seed ortholog is 100%.
Bootstrap support for D3AX76 as seed ortholog is 100%.

Group of orthologs #739. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 P.pallidum:153

F6ZRB6              	100.00%		D3B2Q1              	100.00%
Bootstrap support for F6ZRB6 as seed ortholog is 100%.
Bootstrap support for D3B2Q1 as seed ortholog is 100%.

Group of orthologs #740. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 P.pallidum:157

F6UAX7              	100.00%		D3BAW0              	100.00%
Bootstrap support for F6UAX7 as seed ortholog is 99%.
Bootstrap support for D3BAW0 as seed ortholog is 99%.

Group of orthologs #741. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 P.pallidum:287

F7AUL7              	100.00%		D3AWA1              	100.00%
Bootstrap support for F7AUL7 as seed ortholog is 100%.
Bootstrap support for D3AWA1 as seed ortholog is 100%.

Group of orthologs #742. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 P.pallidum:287

F6RQS4              	100.00%		D3BIG5              	100.00%
Bootstrap support for F6RQS4 as seed ortholog is 100%.
Bootstrap support for D3BIG5 as seed ortholog is 100%.

Group of orthologs #743. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 P.pallidum:287

F6ZU97              	100.00%		D3BLY8              	100.00%
Bootstrap support for F6ZU97 as seed ortholog is 100%.
Bootstrap support for D3BLY8 as seed ortholog is 100%.

Group of orthologs #744. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 P.pallidum:287

F6ZCS4              	100.00%		D3BQU0              	100.00%
Bootstrap support for F6ZCS4 as seed ortholog is 100%.
Bootstrap support for D3BQU0 as seed ortholog is 100%.

Group of orthologs #745. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 P.pallidum:287

F6Y7E9              	100.00%		D3BVG5              	100.00%
Bootstrap support for F6Y7E9 as seed ortholog is 100%.
Bootstrap support for D3BVG5 as seed ortholog is 100%.

Group of orthologs #746. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.pallidum:286

F6SLD6              	100.00%		D3BEI1              	100.00%
Bootstrap support for F6SLD6 as seed ortholog is 98%.
Bootstrap support for D3BEI1 as seed ortholog is 100%.

Group of orthologs #747. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 P.pallidum:208

F6TFD0              	100.00%		D3BR68              	100.00%
Bootstrap support for F6TFD0 as seed ortholog is 100%.
Bootstrap support for D3BR68 as seed ortholog is 100%.

Group of orthologs #748. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 P.pallidum:285

F6VXD0              	100.00%		D3BTL6              	100.00%
Bootstrap support for F6VXD0 as seed ortholog is 100%.
Bootstrap support for D3BTL6 as seed ortholog is 100%.

Group of orthologs #749. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 P.pallidum:285

F7ATS3              	100.00%		D3BKF4              	100.00%
Bootstrap support for F7ATS3 as seed ortholog is 100%.
Bootstrap support for D3BKF4 as seed ortholog is 100%.

Group of orthologs #750. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 P.pallidum:284

H2XQN8              	100.00%		D3B9C5              	100.00%
                    	       		D3BAB8              	7.17%
                    	       		D3BAB9              	5.57%
Bootstrap support for H2XQN8 as seed ortholog is 100%.
Bootstrap support for D3B9C5 as seed ortholog is 100%.

Group of orthologs #751. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 P.pallidum:284

F6RID7              	100.00%		D3B782              	100.00%
                    	       		D3AX99              	47.53%
Bootstrap support for F6RID7 as seed ortholog is 100%.
Bootstrap support for D3B782 as seed ortholog is 100%.

Group of orthologs #752. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 P.pallidum:284

F6SH99              	100.00%		D3BHH0              	100.00%
Bootstrap support for F6SH99 as seed ortholog is 100%.
Bootstrap support for D3BHH0 as seed ortholog is 100%.

Group of orthologs #753. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 P.pallidum:284

F6S3G5              	100.00%		D3BUA6              	100.00%
Bootstrap support for F6S3G5 as seed ortholog is 100%.
Bootstrap support for D3BUA6 as seed ortholog is 100%.

Group of orthologs #754. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 P.pallidum:284

F6UWK1              	100.00%		D3BNW9              	100.00%
Bootstrap support for F6UWK1 as seed ortholog is 100%.
Bootstrap support for D3BNW9 as seed ortholog is 100%.

Group of orthologs #755. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 P.pallidum:284

F6Z326              	100.00%		D3BFU4              	100.00%
Bootstrap support for F6Z326 as seed ortholog is 100%.
Bootstrap support for D3BFU4 as seed ortholog is 100%.

Group of orthologs #756. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 P.pallidum:284

F6XER0              	100.00%		D3BKA5              	100.00%
Bootstrap support for F6XER0 as seed ortholog is 100%.
Bootstrap support for D3BKA5 as seed ortholog is 100%.

Group of orthologs #757. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 P.pallidum:284

F6XVD3              	100.00%		D3BRL6              	100.00%
Bootstrap support for F6XVD3 as seed ortholog is 100%.
Bootstrap support for D3BRL6 as seed ortholog is 100%.

Group of orthologs #758. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 P.pallidum:283

F6WRC9              	100.00%		D3AZB1              	100.00%
Bootstrap support for F6WRC9 as seed ortholog is 100%.
Bootstrap support for D3AZB1 as seed ortholog is 100%.

Group of orthologs #759. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 P.pallidum:283

F7A1R5              	100.00%		D3BPG0              	100.00%
Bootstrap support for F7A1R5 as seed ortholog is 100%.
Bootstrap support for D3BPG0 as seed ortholog is 100%.

Group of orthologs #760. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 P.pallidum:282

F6U952              	100.00%		D3BKS0              	100.00%
                    	       		D3BBX1              	31.16%
                    	       		D3B7Q9              	17.66%
                    	       		D3B6P3              	8.10%
                    	       		D3B3M5              	6.64%
                    	       		D3B1B3              	5.62%
Bootstrap support for F6U952 as seed ortholog is 100%.
Bootstrap support for D3BKS0 as seed ortholog is 100%.

Group of orthologs #761. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 P.pallidum:282

F7BNW5              	100.00%		D3B264              	100.00%
Bootstrap support for F7BNW5 as seed ortholog is 100%.
Bootstrap support for D3B264 as seed ortholog is 100%.

Group of orthologs #762. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 P.pallidum:282

F6R589              	100.00%		D3BSY5              	100.00%
Bootstrap support for F6R589 as seed ortholog is 100%.
Bootstrap support for D3BSY5 as seed ortholog is 100%.

Group of orthologs #763. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 P.pallidum:179

F6TEZ1              	100.00%		D3BPL1              	100.00%
Bootstrap support for F6TEZ1 as seed ortholog is 100%.
Bootstrap support for D3BPL1 as seed ortholog is 99%.

Group of orthologs #764. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 P.pallidum:282

F6Z6H7              	100.00%		D3BIJ9              	100.00%
Bootstrap support for F6Z6H7 as seed ortholog is 100%.
Bootstrap support for D3BIJ9 as seed ortholog is 100%.

Group of orthologs #765. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 P.pallidum:131

H2XUE3              	100.00%		D3B770              	100.00%
Bootstrap support for H2XUE3 as seed ortholog is 100%.
Bootstrap support for D3B770 as seed ortholog is 100%.

Group of orthologs #766. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 P.pallidum:142

H2XKB1              	100.00%		D3BHH2              	100.00%
Bootstrap support for H2XKB1 as seed ortholog is 100%.
Bootstrap support for D3BHH2 as seed ortholog is 97%.

Group of orthologs #767. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.pallidum:68

H2Y1B2              	100.00%		D3BGU2              	100.00%
Bootstrap support for H2Y1B2 as seed ortholog is 98%.
Bootstrap support for D3BGU2 as seed ortholog is 97%.

Group of orthologs #768. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 P.pallidum:282

H2XVI6              	100.00%		D3BR41              	100.00%
Bootstrap support for H2XVI6 as seed ortholog is 100%.
Bootstrap support for D3BR41 as seed ortholog is 100%.

Group of orthologs #769. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:56

F6XCQ7              	100.00%		D3B0H3              	100.00%
Bootstrap support for F6XCQ7 as seed ortholog is 99%.
Bootstrap support for D3B0H3 as seed ortholog is 98%.

Group of orthologs #770. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 P.pallidum:280

F6TIM2              	100.00%		D3B2K3              	100.00%
Bootstrap support for F6TIM2 as seed ortholog is 100%.
Bootstrap support for D3B2K3 as seed ortholog is 100%.

Group of orthologs #771. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.pallidum:96

F6UK82              	100.00%		D3B626              	100.00%
Bootstrap support for F6UK82 as seed ortholog is 99%.
Bootstrap support for D3B626 as seed ortholog is 99%.

Group of orthologs #772. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.pallidum:280

H2XMI3              	100.00%		D3AXW2              	100.00%
Bootstrap support for H2XMI3 as seed ortholog is 88%.
Bootstrap support for D3AXW2 as seed ortholog is 100%.

Group of orthologs #773. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 P.pallidum:280

F6XL41              	100.00%		D3BI13              	100.00%
Bootstrap support for F6XL41 as seed ortholog is 100%.
Bootstrap support for D3BI13 as seed ortholog is 100%.

Group of orthologs #774. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.pallidum:141

H2XQ03              	100.00%		D3BQN8              	100.00%
Bootstrap support for H2XQ03 as seed ortholog is 88%.
Bootstrap support for D3BQN8 as seed ortholog is 99%.

Group of orthologs #775. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.pallidum:141

H2XR98              	100.00%		D3BUT4              	100.00%
Bootstrap support for H2XR98 as seed ortholog is 99%.
Bootstrap support for D3BUT4 as seed ortholog is 99%.

Group of orthologs #776. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 P.pallidum:279

F6RTW0              	100.00%		D3B1H3              	100.00%
Bootstrap support for F6RTW0 as seed ortholog is 100%.
Bootstrap support for D3B1H3 as seed ortholog is 100%.

Group of orthologs #777. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.pallidum:173

F6XWW8              	100.00%		D3BAF6              	100.00%
Bootstrap support for F6XWW8 as seed ortholog is 99%.
Bootstrap support for D3BAF6 as seed ortholog is 100%.

Group of orthologs #778. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 P.pallidum:279

F6W2M8              	100.00%		D3BMD5              	100.00%
Bootstrap support for F6W2M8 as seed ortholog is 100%.
Bootstrap support for D3BMD5 as seed ortholog is 100%.

Group of orthologs #779. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 P.pallidum:278

H2XRW4              	100.00%		D3BDT2              	100.00%
Bootstrap support for H2XRW4 as seed ortholog is 100%.
Bootstrap support for D3BDT2 as seed ortholog is 100%.

Group of orthologs #780. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 P.pallidum:204

F6XMP8              	100.00%		D3AVQ3              	100.00%
Bootstrap support for F6XMP8 as seed ortholog is 100%.
Bootstrap support for D3AVQ3 as seed ortholog is 100%.

Group of orthologs #781. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.pallidum:277

F6ZGG6              	100.00%		D3B3S8              	100.00%
Bootstrap support for F6ZGG6 as seed ortholog is 100%.
Bootstrap support for D3B3S8 as seed ortholog is 100%.

Group of orthologs #782. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 P.pallidum:277

F6ZYJ2              	100.00%		D3B3R7              	100.00%
Bootstrap support for F6ZYJ2 as seed ortholog is 100%.
Bootstrap support for D3B3R7 as seed ortholog is 100%.

Group of orthologs #783. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 P.pallidum:231

F6TJJ7              	100.00%		D3BM83              	100.00%
Bootstrap support for F6TJJ7 as seed ortholog is 47%.
Alternative seed ortholog is F6XWE7 (19 bits away from this cluster)
Bootstrap support for D3BM83 as seed ortholog is 100%.

Group of orthologs #784. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 P.pallidum:277

F6V766              	100.00%		D3BNC9              	100.00%
Bootstrap support for F6V766 as seed ortholog is 100%.
Bootstrap support for D3BNC9 as seed ortholog is 100%.

Group of orthologs #785. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 P.pallidum:156

F6YI64              	100.00%		D3BHC9              	100.00%
Bootstrap support for F6YI64 as seed ortholog is 100%.
Bootstrap support for D3BHC9 as seed ortholog is 100%.

Group of orthologs #786. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 P.pallidum:276

H2XTB0              	100.00%		D3BRK4              	100.00%
Bootstrap support for H2XTB0 as seed ortholog is 100%.
Bootstrap support for D3BRK4 as seed ortholog is 100%.

Group of orthologs #787. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.pallidum:54

H2Y3H5              	100.00%		D3BH94              	100.00%
Bootstrap support for H2Y3H5 as seed ortholog is 99%.
Bootstrap support for D3BH94 as seed ortholog is 99%.

Group of orthologs #788. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.pallidum:275

F6PJM3              	100.00%		D3BIM4              	100.00%
Bootstrap support for F6PJM3 as seed ortholog is 99%.
Bootstrap support for D3BIM4 as seed ortholog is 100%.

Group of orthologs #789. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.pallidum:39

F6XPL3              	100.00%		D3AZ82              	100.00%
F7B875              	32.57%		
F7AAZ2              	14.30%		
Bootstrap support for F6XPL3 as seed ortholog is 94%.
Bootstrap support for D3AZ82 as seed ortholog is 80%.

Group of orthologs #790. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 P.pallidum:274

H2XWU7              	100.00%		D3BV94              	100.00%
                    	       		D3BVB3              	41.67%
                    	       		D3BVB6              	33.67%
Bootstrap support for H2XWU7 as seed ortholog is 100%.
Bootstrap support for D3BV94 as seed ortholog is 100%.

Group of orthologs #791. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.pallidum:117

F6T2A6              	100.00%		D3BBP5              	100.00%
F6T2C1              	56.52%		
Bootstrap support for F6T2A6 as seed ortholog is 100%.
Bootstrap support for D3BBP5 as seed ortholog is 100%.

Group of orthologs #792. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 P.pallidum:274

F6W170              	100.00%		D3AYR4              	100.00%
Bootstrap support for F6W170 as seed ortholog is 100%.
Bootstrap support for D3AYR4 as seed ortholog is 100%.

Group of orthologs #793. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 P.pallidum:274

F6ZUD0              	100.00%		D3B2L6              	100.00%
Bootstrap support for F6ZUD0 as seed ortholog is 100%.
Bootstrap support for D3B2L6 as seed ortholog is 100%.

Group of orthologs #794. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 P.pallidum:273

F7A5R9              	100.00%		D3BIB6              	100.00%
Bootstrap support for F7A5R9 as seed ortholog is 100%.
Bootstrap support for D3BIB6 as seed ortholog is 100%.

Group of orthologs #795. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 P.pallidum:272

F6PKD1              	100.00%		D3BLV6              	100.00%
Bootstrap support for F6PKD1 as seed ortholog is 100%.
Bootstrap support for D3BLV6 as seed ortholog is 100%.

Group of orthologs #796. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.pallidum:272

F6UJM5              	100.00%		D3BCJ7              	100.00%
Bootstrap support for F6UJM5 as seed ortholog is 100%.
Bootstrap support for D3BCJ7 as seed ortholog is 100%.

Group of orthologs #797. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.pallidum:111

F6ZUU0              	100.00%		D3B5M6              	100.00%
Bootstrap support for F6ZUU0 as seed ortholog is 99%.
Bootstrap support for D3B5M6 as seed ortholog is 99%.

Group of orthologs #798. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 P.pallidum:271

F6TCH6              	100.00%		D3B508              	100.00%
Bootstrap support for F6TCH6 as seed ortholog is 100%.
Bootstrap support for D3B508 as seed ortholog is 100%.

Group of orthologs #799. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 P.pallidum:271

F6XC92              	100.00%		D3B7N8              	100.00%
Bootstrap support for F6XC92 as seed ortholog is 100%.
Bootstrap support for D3B7N8 as seed ortholog is 100%.

Group of orthologs #800. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 P.pallidum:271

F6Z910              	100.00%		D3BS90              	100.00%
Bootstrap support for F6Z910 as seed ortholog is 100%.
Bootstrap support for D3BS90 as seed ortholog is 100%.

Group of orthologs #801. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 P.pallidum:271

H2XY62              	100.00%		D3BBM4              	100.00%
Bootstrap support for H2XY62 as seed ortholog is 100%.
Bootstrap support for D3BBM4 as seed ortholog is 100%.

Group of orthologs #802. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 P.pallidum:271

F7B2R9              	100.00%		D3BU50              	100.00%
Bootstrap support for F7B2R9 as seed ortholog is 100%.
Bootstrap support for D3BU50 as seed ortholog is 100%.

Group of orthologs #803. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 P.pallidum:271

H2XVN3              	100.00%		D3BV85              	100.00%
Bootstrap support for H2XVN3 as seed ortholog is 100%.
Bootstrap support for D3BV85 as seed ortholog is 100%.

Group of orthologs #804. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 P.pallidum:271

H2Y2X4              	100.00%		D3BR94              	100.00%
Bootstrap support for H2Y2X4 as seed ortholog is 100%.
Bootstrap support for D3BR94 as seed ortholog is 100%.

Group of orthologs #805. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 P.pallidum:127

Q5VHU5              	100.00%		D3BBH9              	100.00%
Q5VHU3              	22.90%		D3AZZ2              	7.70%
Bootstrap support for Q5VHU5 as seed ortholog is 100%.
Bootstrap support for D3BBH9 as seed ortholog is 99%.

Group of orthologs #806. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 P.pallidum:270

F6ULS9              	100.00%		D3B059              	100.00%
Bootstrap support for F6ULS9 as seed ortholog is 100%.
Bootstrap support for D3B059 as seed ortholog is 100%.

Group of orthologs #807. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 P.pallidum:270

F7BF26              	100.00%		D3B0K1              	100.00%
Bootstrap support for F7BF26 as seed ortholog is 100%.
Bootstrap support for D3B0K1 as seed ortholog is 100%.

Group of orthologs #808. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 P.pallidum:69

F6Z3S0              	100.00%		D3B8P9              	100.00%
Bootstrap support for F6Z3S0 as seed ortholog is 100%.
Bootstrap support for D3B8P9 as seed ortholog is 93%.

Group of orthologs #809. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.pallidum:205

F7AHV7              	100.00%		D3AYY9              	100.00%
Bootstrap support for F7AHV7 as seed ortholog is 100%.
Bootstrap support for D3AYY9 as seed ortholog is 100%.

Group of orthologs #810. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.pallidum:129

F6VHJ0              	100.00%		D3BL52              	100.00%
Bootstrap support for F6VHJ0 as seed ortholog is 99%.
Bootstrap support for D3BL52 as seed ortholog is 99%.

Group of orthologs #811. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 P.pallidum:269

H2XLC7              	100.00%		D3B806              	100.00%
Bootstrap support for H2XLC7 as seed ortholog is 100%.
Bootstrap support for D3B806 as seed ortholog is 100%.

Group of orthologs #812. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 P.pallidum:146

F6YBW7              	100.00%		D3BTY6              	100.00%
Bootstrap support for F6YBW7 as seed ortholog is 100%.
Bootstrap support for D3BTY6 as seed ortholog is 99%.

Group of orthologs #813. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 P.pallidum:268

F6Q3Y2              	100.00%		D3BQI5              	100.00%
Bootstrap support for F6Q3Y2 as seed ortholog is 100%.
Bootstrap support for D3BQI5 as seed ortholog is 100%.

Group of orthologs #814. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 P.pallidum:267

F6PKJ4              	100.00%		D3BF03              	100.00%
Bootstrap support for F6PKJ4 as seed ortholog is 100%.
Bootstrap support for D3BF03 as seed ortholog is 100%.

Group of orthologs #815. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.pallidum:104

F6RD19              	100.00%		D3BFQ8              	100.00%
Bootstrap support for F6RD19 as seed ortholog is 100%.
Bootstrap support for D3BFQ8 as seed ortholog is 99%.

Group of orthologs #816. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 P.pallidum:267

H2XY10              	100.00%		D3B6D7              	100.00%
Bootstrap support for H2XY10 as seed ortholog is 100%.
Bootstrap support for D3B6D7 as seed ortholog is 100%.

Group of orthologs #817. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 P.pallidum:267

F6ZL64              	100.00%		D3BQX5              	100.00%
Bootstrap support for F6ZL64 as seed ortholog is 100%.
Bootstrap support for D3BQX5 as seed ortholog is 100%.

Group of orthologs #818. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:85

F6SXV5              	100.00%		D3BRF5              	100.00%
                    	       		D3BMM2              	19.27%
                    	       		D3BQG0              	9.15%
Bootstrap support for F6SXV5 as seed ortholog is 87%.
Bootstrap support for D3BRF5 as seed ortholog is 94%.

Group of orthologs #819. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 P.pallidum:266

F7BDE0              	100.00%		D3BNE3              	100.00%
Bootstrap support for F7BDE0 as seed ortholog is 100%.
Bootstrap support for D3BNE3 as seed ortholog is 100%.

Group of orthologs #820. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 P.pallidum:265

F6SDE2              	100.00%		D3B4H6              	100.00%
Bootstrap support for F6SDE2 as seed ortholog is 100%.
Bootstrap support for D3B4H6 as seed ortholog is 100%.

Group of orthologs #821. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 P.pallidum:265

F6WSV3              	100.00%		D3B2U8              	100.00%
Bootstrap support for F6WSV3 as seed ortholog is 100%.
Bootstrap support for D3B2U8 as seed ortholog is 100%.

Group of orthologs #822. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 P.pallidum:265

F6YDK0              	100.00%		D3B9Y2              	100.00%
Bootstrap support for F6YDK0 as seed ortholog is 100%.
Bootstrap support for D3B9Y2 as seed ortholog is 100%.

Group of orthologs #823. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 P.pallidum:265

H2XRD9              	100.00%		D3AXP5              	100.00%
Bootstrap support for H2XRD9 as seed ortholog is 100%.
Bootstrap support for D3AXP5 as seed ortholog is 100%.

Group of orthologs #824. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 P.pallidum:264

F7AMB6              	100.00%		D3BVM3              	100.00%
                    	       		D3B7L6              	13.07%
Bootstrap support for F7AMB6 as seed ortholog is 100%.
Bootstrap support for D3BVM3 as seed ortholog is 100%.

Group of orthologs #825. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.pallidum:264

F6PSK8              	100.00%		D3BCL5              	100.00%
Bootstrap support for F6PSK8 as seed ortholog is 100%.
Bootstrap support for D3BCL5 as seed ortholog is 100%.

Group of orthologs #826. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.pallidum:115

F6XGG4              	100.00%		D3AY59              	100.00%
Bootstrap support for F6XGG4 as seed ortholog is 99%.
Bootstrap support for D3AY59 as seed ortholog is 100%.

Group of orthologs #827. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.pallidum:102

F6S1S7              	100.00%		D3BBG2              	100.00%
Bootstrap support for F6S1S7 as seed ortholog is 99%.
Bootstrap support for D3BBG2 as seed ortholog is 99%.

Group of orthologs #828. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 P.pallidum:129

F6S4D4              	100.00%		D3BL50              	100.00%
Bootstrap support for F6S4D4 as seed ortholog is 100%.
Bootstrap support for D3BL50 as seed ortholog is 95%.

Group of orthologs #829. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 P.pallidum:184

F6SP32              	100.00%		D3BKV9              	100.00%
Bootstrap support for F6SP32 as seed ortholog is 100%.
Bootstrap support for D3BKV9 as seed ortholog is 99%.

Group of orthologs #830. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 P.pallidum:264

H2XVX5              	100.00%		D3BV31              	100.00%
Bootstrap support for H2XVX5 as seed ortholog is 100%.
Bootstrap support for D3BV31 as seed ortholog is 100%.

Group of orthologs #831. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.pallidum:44

H2XPG6              	100.00%		D3B0T3              	100.00%
Bootstrap support for H2XPG6 as seed ortholog is 97%.
Bootstrap support for D3B0T3 as seed ortholog is 82%.

Group of orthologs #832. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 P.pallidum:212

F6YLQ9              	100.00%		D3BEV9              	100.00%
Bootstrap support for F6YLQ9 as seed ortholog is 100%.
Bootstrap support for D3BEV9 as seed ortholog is 100%.

Group of orthologs #833. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 P.pallidum:263

Q1RPZ2              	100.00%		D3BSQ9              	100.00%
Bootstrap support for Q1RPZ2 as seed ortholog is 100%.
Bootstrap support for D3BSQ9 as seed ortholog is 100%.

Group of orthologs #834. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 P.pallidum:262

F6VBG8              	100.00%		D3BAC1              	100.00%
Bootstrap support for F6VBG8 as seed ortholog is 100%.
Bootstrap support for D3BAC1 as seed ortholog is 100%.

Group of orthologs #835. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 P.pallidum:261

F6PM63              	100.00%		D3BCA4              	100.00%
Bootstrap support for F6PM63 as seed ortholog is 100%.
Bootstrap support for D3BCA4 as seed ortholog is 100%.

Group of orthologs #836. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 P.pallidum:261

F7ASJ4              	100.00%		D3B5S9              	100.00%
Bootstrap support for F7ASJ4 as seed ortholog is 100%.
Bootstrap support for D3B5S9 as seed ortholog is 100%.

Group of orthologs #837. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.pallidum:172

F6ZTE1              	100.00%		D3B8K2              	100.00%
Bootstrap support for F6ZTE1 as seed ortholog is 99%.
Bootstrap support for D3B8K2 as seed ortholog is 99%.

Group of orthologs #838. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 P.pallidum:23

F7BKD9              	100.00%		D3BGF6              	100.00%
Bootstrap support for F7BKD9 as seed ortholog is 100%.
Bootstrap support for D3BGF6 as seed ortholog is 75%.

Group of orthologs #839. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 P.pallidum:52

F6Z9D3              	100.00%		D3BGZ5              	100.00%
F7B9D6              	6.33%		D3BKT2              	7.33%
Bootstrap support for F6Z9D3 as seed ortholog is 78%.
Bootstrap support for D3BGZ5 as seed ortholog is 95%.

Group of orthologs #840. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 P.pallidum:260

F6WBE1              	100.00%		D3BK79              	100.00%
Bootstrap support for F6WBE1 as seed ortholog is 100%.
Bootstrap support for D3BK79 as seed ortholog is 100%.

Group of orthologs #841. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.pallidum:157

F6QXQ1              	100.00%		D3BH20              	100.00%
F6PPW9              	40.40%		
Bootstrap support for F6QXQ1 as seed ortholog is 99%.
Bootstrap support for D3BH20 as seed ortholog is 99%.

Group of orthologs #842. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.pallidum:156

F6ZKW1              	100.00%		D3B7P1              	100.00%
                    	       		D3BSF4              	19.34%
Bootstrap support for F6ZKW1 as seed ortholog is 100%.
Bootstrap support for D3B7P1 as seed ortholog is 100%.

Group of orthologs #843. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.pallidum:259

F6UPC7              	100.00%		D3BAC7              	100.00%
Bootstrap support for F6UPC7 as seed ortholog is 100%.
Bootstrap support for D3BAC7 as seed ortholog is 100%.

Group of orthologs #844. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 P.pallidum:177

Q68A31              	100.00%		D3BCJ1              	100.00%
Bootstrap support for Q68A31 as seed ortholog is 100%.
Bootstrap support for D3BCJ1 as seed ortholog is 99%.

Group of orthologs #845. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 P.pallidum:258

F6YCG7              	100.00%		D3BMF0              	100.00%
F6UW56              	5.19%		D3BRP7              	19.86%
Bootstrap support for F6YCG7 as seed ortholog is 100%.
Bootstrap support for D3BMF0 as seed ortholog is 100%.

Group of orthologs #846. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 P.pallidum:258

F6UUI8              	100.00%		D3BBK8              	100.00%
Bootstrap support for F6UUI8 as seed ortholog is 100%.
Bootstrap support for D3BBK8 as seed ortholog is 100%.

Group of orthologs #847. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 P.pallidum:258

F6XXF0              	100.00%		D3BT29              	100.00%
Bootstrap support for F6XXF0 as seed ortholog is 100%.
Bootstrap support for D3BT29 as seed ortholog is 100%.

Group of orthologs #848. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 P.pallidum:258

F6X9L5              	100.00%		D3BUK1              	100.00%
Bootstrap support for F6X9L5 as seed ortholog is 100%.
Bootstrap support for D3BUK1 as seed ortholog is 100%.

Group of orthologs #849. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 P.pallidum:257

F6TVY6              	100.00%		D3B6Y4              	100.00%
Bootstrap support for F6TVY6 as seed ortholog is 100%.
Bootstrap support for D3B6Y4 as seed ortholog is 100%.

Group of orthologs #850. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 P.pallidum:257

F6YHC8              	100.00%		D3BB37              	100.00%
Bootstrap support for F6YHC8 as seed ortholog is 100%.
Bootstrap support for D3BB37 as seed ortholog is 100%.

Group of orthologs #851. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 P.pallidum:33

F6UAF0              	100.00%		D3BQE6              	100.00%
Bootstrap support for F6UAF0 as seed ortholog is 59%.
Alternative seed ortholog is H2XNB4 (6 bits away from this cluster)
Bootstrap support for D3BQE6 as seed ortholog is 92%.

Group of orthologs #852. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 P.pallidum:257

F6TC91              	100.00%		D3BTE8              	100.00%
Bootstrap support for F6TC91 as seed ortholog is 100%.
Bootstrap support for D3BTE8 as seed ortholog is 100%.

Group of orthologs #853. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 P.pallidum:256

F7AX97              	100.00%		D3B128              	100.00%
                    	       		D3AY23              	7.27%
Bootstrap support for F7AX97 as seed ortholog is 64%.
Alternative seed ortholog is F6RUN6 (19 bits away from this cluster)
Bootstrap support for D3B128 as seed ortholog is 100%.

Group of orthologs #854. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 P.pallidum:256

F6SSN4              	100.00%		D3BK02              	100.00%
Bootstrap support for F6SSN4 as seed ortholog is 100%.
Bootstrap support for D3BK02 as seed ortholog is 100%.

Group of orthologs #855. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 P.pallidum:23

F6Y3K6              	100.00%		D3BHE7              	100.00%
Bootstrap support for F6Y3K6 as seed ortholog is 100%.
Bootstrap support for D3BHE7 as seed ortholog is 68%.
Alternative seed ortholog is D3BRB8 (23 bits away from this cluster)

Group of orthologs #856. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:255

F6Q6W6              	100.00%		D3BIM8              	100.00%
F6WVH2              	59.43%		
Bootstrap support for F6Q6W6 as seed ortholog is 90%.
Bootstrap support for D3BIM8 as seed ortholog is 100%.

Group of orthologs #857. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 P.pallidum:255

H2XSN2              	100.00%		D3B181              	100.00%
Bootstrap support for H2XSN2 as seed ortholog is 100%.
Bootstrap support for D3B181 as seed ortholog is 100%.

Group of orthologs #858. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 P.pallidum:254

F6TA53              	100.00%		D3B6Y2              	100.00%
Bootstrap support for F6TA53 as seed ortholog is 100%.
Bootstrap support for D3B6Y2 as seed ortholog is 100%.

Group of orthologs #859. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 P.pallidum:254

F6QY42              	100.00%		D3BG97              	100.00%
Bootstrap support for F6QY42 as seed ortholog is 100%.
Bootstrap support for D3BG97 as seed ortholog is 100%.

Group of orthologs #860. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.pallidum:186

F6VQ02              	100.00%		D3BG93              	100.00%
Bootstrap support for F6VQ02 as seed ortholog is 100%.
Bootstrap support for D3BG93 as seed ortholog is 100%.

Group of orthologs #861. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.pallidum:253

F6WLN1              	100.00%		D3AZH8              	100.00%
Bootstrap support for F6WLN1 as seed ortholog is 100%.
Bootstrap support for D3AZH8 as seed ortholog is 100%.

Group of orthologs #862. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 P.pallidum:253

H2XVP1              	100.00%		D3BBQ7              	100.00%
Bootstrap support for H2XVP1 as seed ortholog is 100%.
Bootstrap support for D3BBQ7 as seed ortholog is 100%.

Group of orthologs #863. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.pallidum:252

H2XQH0              	100.00%		D3B0H8              	100.00%
F6ZRC6              	31.51%		D3BN01              	25.75%
H2XUY3              	11.17%		
Bootstrap support for H2XQH0 as seed ortholog is 96%.
Bootstrap support for D3B0H8 as seed ortholog is 100%.

Group of orthologs #864. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 P.pallidum:52

F6WYU9              	100.00%		D3B6C3              	100.00%
Bootstrap support for F6WYU9 as seed ortholog is 100%.
Bootstrap support for D3B6C3 as seed ortholog is 99%.

Group of orthologs #865. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 P.pallidum:252

F6UMM5              	100.00%		D3BBM0              	100.00%
Bootstrap support for F6UMM5 as seed ortholog is 100%.
Bootstrap support for D3BBM0 as seed ortholog is 100%.

Group of orthologs #866. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 P.pallidum:252

F6PQL4              	100.00%		D3BM56              	100.00%
Bootstrap support for F6PQL4 as seed ortholog is 100%.
Bootstrap support for D3BM56 as seed ortholog is 100%.

Group of orthologs #867. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 P.pallidum:252

F6UUV5              	100.00%		D3BL35              	100.00%
Bootstrap support for F6UUV5 as seed ortholog is 100%.
Bootstrap support for D3BL35 as seed ortholog is 100%.

Group of orthologs #868. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 P.pallidum:251

F6Q8V8              	100.00%		D3AYQ3              	100.00%
Bootstrap support for F6Q8V8 as seed ortholog is 100%.
Bootstrap support for D3AYQ3 as seed ortholog is 100%.

Group of orthologs #869. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 P.pallidum:6

F6PN41              	100.00%		D3B3C1              	100.00%
Bootstrap support for F6PN41 as seed ortholog is 100%.
Bootstrap support for D3B3C1 as seed ortholog is 56%.
Alternative seed ortholog is D3BL07 (6 bits away from this cluster)

Group of orthologs #870. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 P.pallidum:251

F6R7I5              	100.00%		D3BCN3              	100.00%
Bootstrap support for F6R7I5 as seed ortholog is 100%.
Bootstrap support for D3BCN3 as seed ortholog is 100%.

Group of orthologs #871. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 P.pallidum:134

F6TZU9              	100.00%		D3B7J9              	100.00%
Bootstrap support for F6TZU9 as seed ortholog is 100%.
Bootstrap support for D3B7J9 as seed ortholog is 93%.

Group of orthologs #872. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 P.pallidum:250

F6U7F8              	100.00%		D3BEY6              	100.00%
F6SMM7              	22.35%		
F6RW80              	10.62%		
H2XYP0              	6.09%		
Bootstrap support for F6U7F8 as seed ortholog is 73%.
Alternative seed ortholog is F6ZRP3 (39 bits away from this cluster)
Bootstrap support for D3BEY6 as seed ortholog is 100%.

Group of orthologs #873. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 P.pallidum:181

F6QQZ3              	100.00%		D3BEP4              	100.00%
Q68A28              	14.46%		
H2XU41              	10.84%		
Bootstrap support for F6QQZ3 as seed ortholog is 100%.
Bootstrap support for D3BEP4 as seed ortholog is 100%.

Group of orthologs #874. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 P.pallidum:250

F7AR57              	100.00%		D3AWV1              	100.00%
                    	       		D3BKE1              	53.36%
                    	       		D3BKE0              	22.92%
Bootstrap support for F7AR57 as seed ortholog is 100%.
Bootstrap support for D3AWV1 as seed ortholog is 100%.

Group of orthologs #875. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 P.pallidum:139

F6QWS2              	100.00%		D3BPL3              	100.00%
F6WYW5              	9.69%		D3BP03              	50.31%
Bootstrap support for F6QWS2 as seed ortholog is 36%.
Alternative seed ortholog is F6RBW8 (9 bits away from this cluster)
Bootstrap support for D3BPL3 as seed ortholog is 99%.

Group of orthologs #876. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 P.pallidum:250

F6W141              	100.00%		D3AZH4              	100.00%
Bootstrap support for F6W141 as seed ortholog is 100%.
Bootstrap support for D3AZH4 as seed ortholog is 100%.

Group of orthologs #877. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.pallidum:250

F6V9V8              	100.00%		D3B256              	100.00%
Bootstrap support for F6V9V8 as seed ortholog is 95%.
Bootstrap support for D3B256 as seed ortholog is 100%.

Group of orthologs #878. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 P.pallidum:83

F6Y5B7              	100.00%		D3BGI7              	100.00%
Bootstrap support for F6Y5B7 as seed ortholog is 74%.
Alternative seed ortholog is F6Y4V4 (12 bits away from this cluster)
Bootstrap support for D3BGI7 as seed ortholog is 99%.

Group of orthologs #879. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 P.pallidum:250

F6U9X5              	100.00%		D3BV19              	100.00%
Bootstrap support for F6U9X5 as seed ortholog is 100%.
Bootstrap support for D3BV19 as seed ortholog is 100%.

Group of orthologs #880. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 P.pallidum:61

F7AKV1              	100.00%		D3BHN6              	100.00%
F7ACX7              	28.28%		
F6W4W6              	20.08%		
Bootstrap support for F7AKV1 as seed ortholog is 100%.
Bootstrap support for D3BHN6 as seed ortholog is 91%.

Group of orthologs #881. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 P.pallidum:62

F7AD97              	100.00%		D3BBM2              	100.00%
Bootstrap support for F7AD97 as seed ortholog is 100%.
Bootstrap support for D3BBM2 as seed ortholog is 91%.

Group of orthologs #882. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.pallidum:42

F6Z255              	100.00%		D3BL86              	100.00%
Bootstrap support for F6Z255 as seed ortholog is 98%.
Bootstrap support for D3BL86 as seed ortholog is 98%.

Group of orthologs #883. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 P.pallidum:249

F7A4L3              	100.00%		D3BPZ9              	100.00%
Bootstrap support for F7A4L3 as seed ortholog is 100%.
Bootstrap support for D3BPZ9 as seed ortholog is 100%.

Group of orthologs #884. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 P.pallidum:248

F6UMT8              	100.00%		D3BFM3              	100.00%
                    	       		D3BCH9              	6.60%
Bootstrap support for F6UMT8 as seed ortholog is 100%.
Bootstrap support for D3BFM3 as seed ortholog is 100%.

Group of orthologs #885. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 P.pallidum:248

F6S5I8              	100.00%		D3B1B1              	100.00%
Bootstrap support for F6S5I8 as seed ortholog is 100%.
Bootstrap support for D3B1B1 as seed ortholog is 100%.

Group of orthologs #886. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 P.pallidum:248

F6YI25              	100.00%		D3AWH9              	100.00%
Bootstrap support for F6YI25 as seed ortholog is 100%.
Bootstrap support for D3AWH9 as seed ortholog is 100%.

Group of orthologs #887. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.pallidum:248

F6PR16              	100.00%		D3BJ85              	100.00%
Bootstrap support for F6PR16 as seed ortholog is 98%.
Bootstrap support for D3BJ85 as seed ortholog is 100%.

Group of orthologs #888. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 P.pallidum:248

F6YCP6              	100.00%		D3B4F5              	100.00%
Bootstrap support for F6YCP6 as seed ortholog is 100%.
Bootstrap support for D3B4F5 as seed ortholog is 100%.

Group of orthologs #889. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.pallidum:248

F6RRI2              	100.00%		D3BM48              	100.00%
Bootstrap support for F6RRI2 as seed ortholog is 51%.
Alternative seed ortholog is Q1RL25 (55 bits away from this cluster)
Bootstrap support for D3BM48 as seed ortholog is 100%.

Group of orthologs #890. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 P.pallidum:248

F6ZAD3              	100.00%		D3BJZ4              	100.00%
Bootstrap support for F6ZAD3 as seed ortholog is 100%.
Bootstrap support for D3BJZ4 as seed ortholog is 100%.

Group of orthologs #891. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.pallidum:186

F6YGZ1              	100.00%		D3BRV0              	100.00%
Bootstrap support for F6YGZ1 as seed ortholog is 98%.
Bootstrap support for D3BRV0 as seed ortholog is 99%.

Group of orthologs #892. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 P.pallidum:248

H2XVQ9              	100.00%		D3BMH8              	100.00%
Bootstrap support for H2XVQ9 as seed ortholog is 100%.
Bootstrap support for D3BMH8 as seed ortholog is 100%.

Group of orthologs #893. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 P.pallidum:247

F6YSX7              	100.00%		D3B3A4              	100.00%
Bootstrap support for F6YSX7 as seed ortholog is 100%.
Bootstrap support for D3B3A4 as seed ortholog is 100%.

Group of orthologs #894. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 P.pallidum:247

F6STU7              	100.00%		D3BNT3              	100.00%
Bootstrap support for F6STU7 as seed ortholog is 100%.
Bootstrap support for D3BNT3 as seed ortholog is 100%.

Group of orthologs #895. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 P.pallidum:247

F6YN96              	100.00%		D3BJ01              	100.00%
Bootstrap support for F6YN96 as seed ortholog is 100%.
Bootstrap support for D3BJ01 as seed ortholog is 100%.

Group of orthologs #896. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 P.pallidum:247

Q967X2              	100.00%		D3BI96              	100.00%
Bootstrap support for Q967X2 as seed ortholog is 100%.
Bootstrap support for D3BI96 as seed ortholog is 100%.

Group of orthologs #897. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 P.pallidum:247

Q8I7E3              	100.00%		D3BJ37              	100.00%
Bootstrap support for Q8I7E3 as seed ortholog is 100%.
Bootstrap support for D3BJ37 as seed ortholog is 100%.

Group of orthologs #898. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 P.pallidum:247

H2XYL3              	100.00%		D3BR69              	100.00%
Bootstrap support for H2XYL3 as seed ortholog is 100%.
Bootstrap support for D3BR69 as seed ortholog is 100%.

Group of orthologs #899. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.pallidum:96

F6PH64              	100.00%		D3B3Z5              	100.00%
Bootstrap support for F6PH64 as seed ortholog is 99%.
Bootstrap support for D3B3Z5 as seed ortholog is 98%.

Group of orthologs #900. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 P.pallidum:246

F6ZA03              	100.00%		D3B447              	100.00%
Bootstrap support for F6ZA03 as seed ortholog is 100%.
Bootstrap support for D3B447 as seed ortholog is 100%.

Group of orthologs #901. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.pallidum:144

F6W1C5              	100.00%		D3BHT9              	100.00%
Bootstrap support for F6W1C5 as seed ortholog is 99%.
Bootstrap support for D3BHT9 as seed ortholog is 99%.

Group of orthologs #902. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.pallidum:43

F6R0U8              	100.00%		D3BU57              	100.00%
Bootstrap support for F6R0U8 as seed ortholog is 100%.
Bootstrap support for D3BU57 as seed ortholog is 95%.

Group of orthologs #903. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:80

H2XR44              	100.00%		D3BAQ5              	100.00%
Bootstrap support for H2XR44 as seed ortholog is 91%.
Bootstrap support for D3BAQ5 as seed ortholog is 96%.

Group of orthologs #904. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 P.pallidum:63

F6QI54              	100.00%		D3B9R9              	100.00%
Bootstrap support for F6QI54 as seed ortholog is 100%.
Bootstrap support for D3B9R9 as seed ortholog is 84%.

Group of orthologs #905. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 P.pallidum:245

F6U315              	100.00%		D3B4P3              	100.00%
Bootstrap support for F6U315 as seed ortholog is 100%.
Bootstrap support for D3B4P3 as seed ortholog is 100%.

Group of orthologs #906. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 P.pallidum:245

F6YY15              	100.00%		D3B761              	100.00%
Bootstrap support for F6YY15 as seed ortholog is 100%.
Bootstrap support for D3B761 as seed ortholog is 100%.

Group of orthologs #907. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:98

F7AFR6              	100.00%		D3BEC0              	100.00%
Bootstrap support for F7AFR6 as seed ortholog is 99%.
Bootstrap support for D3BEC0 as seed ortholog is 99%.

Group of orthologs #908. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.pallidum:245

H2XNN8              	100.00%		D3B7Q8              	100.00%
Bootstrap support for H2XNN8 as seed ortholog is 100%.
Bootstrap support for D3B7Q8 as seed ortholog is 100%.

Group of orthologs #909. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 P.pallidum:245

F6Y0T9              	100.00%		D3BVI7              	100.00%
Bootstrap support for F6Y0T9 as seed ortholog is 100%.
Bootstrap support for D3BVI7 as seed ortholog is 100%.

Group of orthologs #910. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 P.pallidum:245

H2Y0X5              	100.00%		D3B8B3              	100.00%
Bootstrap support for H2Y0X5 as seed ortholog is 100%.
Bootstrap support for D3B8B3 as seed ortholog is 100%.

Group of orthologs #911. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 P.pallidum:245

H2XYT3              	100.00%		D3BLE5              	100.00%
Bootstrap support for H2XYT3 as seed ortholog is 100%.
Bootstrap support for D3BLE5 as seed ortholog is 100%.

Group of orthologs #912. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 P.pallidum:148

F6RBK2              	100.00%		D3AW79              	100.00%
Bootstrap support for F6RBK2 as seed ortholog is 99%.
Bootstrap support for D3AW79 as seed ortholog is 99%.

Group of orthologs #913. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 P.pallidum:244

F6ZIP8              	100.00%		D3AWD3              	100.00%
Bootstrap support for F6ZIP8 as seed ortholog is 100%.
Bootstrap support for D3AWD3 as seed ortholog is 100%.

Group of orthologs #914. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 P.pallidum:244

F6SNL0              	100.00%		D3BTV2              	100.00%
Bootstrap support for F6SNL0 as seed ortholog is 100%.
Bootstrap support for D3BTV2 as seed ortholog is 100%.

Group of orthologs #915. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 P.pallidum:244

H2XUK5              	100.00%		D3B7L1              	100.00%
Bootstrap support for H2XUK5 as seed ortholog is 100%.
Bootstrap support for D3B7L1 as seed ortholog is 100%.

Group of orthologs #916. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 P.pallidum:244

H2XQ34              	100.00%		D3BNG5              	100.00%
Bootstrap support for H2XQ34 as seed ortholog is 100%.
Bootstrap support for D3BNG5 as seed ortholog is 100%.

Group of orthologs #917. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 P.pallidum:244

H2XUV6              	100.00%		D3BKL8              	100.00%
Bootstrap support for H2XUV6 as seed ortholog is 100%.
Bootstrap support for D3BKL8 as seed ortholog is 100%.

Group of orthologs #918. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 P.pallidum:243

F6UAP7              	100.00%		D3AYV5              	100.00%
Bootstrap support for F6UAP7 as seed ortholog is 99%.
Bootstrap support for D3AYV5 as seed ortholog is 100%.

Group of orthologs #919. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 P.pallidum:243

F6PKS2              	100.00%		D3BFG6              	100.00%
Bootstrap support for F6PKS2 as seed ortholog is 100%.
Bootstrap support for D3BFG6 as seed ortholog is 100%.

Group of orthologs #920. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 P.pallidum:196

F6VPX3              	100.00%		D3B4M1              	100.00%
Bootstrap support for F6VPX3 as seed ortholog is 100%.
Bootstrap support for D3B4M1 as seed ortholog is 100%.

Group of orthologs #921. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 P.pallidum:243

F6TXT5              	100.00%		D3BBF0              	100.00%
Bootstrap support for F6TXT5 as seed ortholog is 100%.
Bootstrap support for D3BBF0 as seed ortholog is 100%.

Group of orthologs #922. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 P.pallidum:243

H2XZN3              	100.00%		D3BB78              	100.00%
Bootstrap support for H2XZN3 as seed ortholog is 100%.
Bootstrap support for D3BB78 as seed ortholog is 100%.

Group of orthologs #923. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 P.pallidum:30

F6WTG3              	100.00%		D3BMB7              	100.00%
F6TIY7              	11.48%		
Bootstrap support for F6WTG3 as seed ortholog is 100%.
Bootstrap support for D3BMB7 as seed ortholog is 56%.
Alternative seed ortholog is D3B233 (30 bits away from this cluster)

Group of orthologs #924. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 P.pallidum:242

F6TX35              	100.00%		D3BKL0              	100.00%
Bootstrap support for F6TX35 as seed ortholog is 100%.
Bootstrap support for D3BKL0 as seed ortholog is 100%.

Group of orthologs #925. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 P.pallidum:242

H2XQ81              	100.00%		D3AXB8              	100.00%
Bootstrap support for H2XQ81 as seed ortholog is 100%.
Bootstrap support for D3AXB8 as seed ortholog is 100%.

Group of orthologs #926. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 P.pallidum:242

F6TXN5              	100.00%		D3BVI2              	100.00%
Bootstrap support for F6TXN5 as seed ortholog is 100%.
Bootstrap support for D3BVI2 as seed ortholog is 100%.

Group of orthologs #927. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.pallidum:242

F6Y7Y1              	100.00%		D3BR73              	100.00%
Bootstrap support for F6Y7Y1 as seed ortholog is 98%.
Bootstrap support for D3BR73 as seed ortholog is 100%.

Group of orthologs #928. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 P.pallidum:242

H2Y100              	100.00%		D3B3M0              	100.00%
Bootstrap support for H2Y100 as seed ortholog is 100%.
Bootstrap support for D3B3M0 as seed ortholog is 100%.

Group of orthologs #929. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 P.pallidum:241

F6UNA3              	100.00%		D3AWL9              	100.00%
F6QH95              	30.44%		
Bootstrap support for F6UNA3 as seed ortholog is 100%.
Bootstrap support for D3AWL9 as seed ortholog is 100%.

Group of orthologs #930. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 P.pallidum:241

F6PM75              	100.00%		D3BC68              	100.00%
Bootstrap support for F6PM75 as seed ortholog is 100%.
Bootstrap support for D3BC68 as seed ortholog is 100%.

Group of orthologs #931. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.pallidum:157

F6SML9              	100.00%		D3BCF1              	100.00%
Bootstrap support for F6SML9 as seed ortholog is 99%.
Bootstrap support for D3BCF1 as seed ortholog is 99%.

Group of orthologs #932. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 P.pallidum:241

F6YEQ8              	100.00%		D3B3C0              	100.00%
Bootstrap support for F6YEQ8 as seed ortholog is 100%.
Bootstrap support for D3B3C0 as seed ortholog is 100%.

Group of orthologs #933. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 P.pallidum:241

F6ZGT8              	100.00%		D3B151              	100.00%
Bootstrap support for F6ZGT8 as seed ortholog is 100%.
Bootstrap support for D3B151 as seed ortholog is 100%.

Group of orthologs #934. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.pallidum:183

F6R683              	100.00%		D3BJX9              	100.00%
Bootstrap support for F6R683 as seed ortholog is 99%.
Bootstrap support for D3BJX9 as seed ortholog is 100%.

Group of orthologs #935. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 P.pallidum:241

F6S0N6              	100.00%		D3BSH6              	100.00%
Bootstrap support for F6S0N6 as seed ortholog is 100%.
Bootstrap support for D3BSH6 as seed ortholog is 100%.

Group of orthologs #936. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.pallidum:240

F6PH72              	100.00%		D3BGC6              	100.00%
                    	       		D3BAY2              	35.72%
                    	       		D3BKZ9              	9.44%
Bootstrap support for F6PH72 as seed ortholog is 100%.
Bootstrap support for D3BGC6 as seed ortholog is 100%.

Group of orthologs #937. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.pallidum:240

F6VKM8              	100.00%		D3B6T5              	100.00%
Bootstrap support for F6VKM8 as seed ortholog is 81%.
Bootstrap support for D3B6T5 as seed ortholog is 100%.

Group of orthologs #938. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.pallidum:62

F6UW46              	100.00%		D3BJU2              	100.00%
Bootstrap support for F6UW46 as seed ortholog is 100%.
Bootstrap support for D3BJU2 as seed ortholog is 97%.

Group of orthologs #939. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.pallidum:240

F6Y089              	100.00%		D3BEM8              	100.00%
Bootstrap support for F6Y089 as seed ortholog is 100%.
Bootstrap support for D3BEM8 as seed ortholog is 100%.

Group of orthologs #940. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.pallidum:135

Q8I7E2              	100.00%		D3AZ65              	100.00%
Bootstrap support for Q8I7E2 as seed ortholog is 99%.
Bootstrap support for D3AZ65 as seed ortholog is 100%.

Group of orthologs #941. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.pallidum:240

H2XT98              	100.00%		D3BI15              	100.00%
Bootstrap support for H2XT98 as seed ortholog is 100%.
Bootstrap support for D3BI15 as seed ortholog is 100%.

Group of orthologs #942. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 P.pallidum:240

H2XW54              	100.00%		D3BM11              	100.00%
Bootstrap support for H2XW54 as seed ortholog is 100%.
Bootstrap support for D3BM11 as seed ortholog is 100%.

Group of orthologs #943. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 P.pallidum:238

F6ZFS8              	100.00%		D3BBH0              	100.00%
F6UR25              	23.14%		
Bootstrap support for F6ZFS8 as seed ortholog is 100%.
Bootstrap support for D3BBH0 as seed ortholog is 100%.

Group of orthologs #944. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:238

F6S902              	100.00%		D3B895              	100.00%
Bootstrap support for F6S902 as seed ortholog is 95%.
Bootstrap support for D3B895 as seed ortholog is 100%.

Group of orthologs #945. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 P.pallidum:238

H2XWM6              	100.00%		D3B271              	100.00%
Bootstrap support for H2XWM6 as seed ortholog is 100%.
Bootstrap support for D3B271 as seed ortholog is 100%.

Group of orthologs #946. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.pallidum:150

F6X4A8              	100.00%		D3BUV0              	100.00%
Bootstrap support for F6X4A8 as seed ortholog is 97%.
Bootstrap support for D3BUV0 as seed ortholog is 100%.

Group of orthologs #947. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 P.pallidum:237

F6RHG2              	100.00%		D3B465              	100.00%
Bootstrap support for F6RHG2 as seed ortholog is 100%.
Bootstrap support for D3B465 as seed ortholog is 100%.

Group of orthologs #948. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 P.pallidum:111

F6RUQ3              	100.00%		D3BIA4              	100.00%
Bootstrap support for F6RUQ3 as seed ortholog is 100%.
Bootstrap support for D3BIA4 as seed ortholog is 99%.

Group of orthologs #949. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 P.pallidum:237

F6V5I4              	100.00%		D3BHR5              	100.00%
Bootstrap support for F6V5I4 as seed ortholog is 100%.
Bootstrap support for D3BHR5 as seed ortholog is 100%.

Group of orthologs #950. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.pallidum:237

F6S6D2              	100.00%		D3BTE4              	100.00%
Bootstrap support for F6S6D2 as seed ortholog is 96%.
Bootstrap support for D3BTE4 as seed ortholog is 100%.

Group of orthologs #951. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.pallidum:164

F7B221              	100.00%		D3BLR6              	100.00%
Bootstrap support for F7B221 as seed ortholog is 99%.
Bootstrap support for D3BLR6 as seed ortholog is 100%.

Group of orthologs #952. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.pallidum:236

F6WAT8              	100.00%		D3BCE7              	100.00%
Bootstrap support for F6WAT8 as seed ortholog is 99%.
Bootstrap support for D3BCE7 as seed ortholog is 100%.

Group of orthologs #953. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 P.pallidum:236

F6WBA4              	100.00%		D3BK06              	100.00%
Bootstrap support for F6WBA4 as seed ortholog is 100%.
Bootstrap support for D3BK06 as seed ortholog is 100%.

Group of orthologs #954. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.pallidum:71

F7A771              	100.00%		D3BGH1              	100.00%
Bootstrap support for F7A771 as seed ortholog is 94%.
Bootstrap support for D3BGH1 as seed ortholog is 99%.

Group of orthologs #955. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 P.pallidum:236

H2Y2N2              	100.00%		D3BEY3              	100.00%
Bootstrap support for H2Y2N2 as seed ortholog is 100%.
Bootstrap support for D3BEY3 as seed ortholog is 100%.

Group of orthologs #956. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 P.pallidum:235

F6X0L7              	100.00%		D3B3N7              	100.00%
                    	       		D3B7G1              	18.74%
Bootstrap support for F6X0L7 as seed ortholog is 100%.
Bootstrap support for D3B3N7 as seed ortholog is 100%.

Group of orthologs #957. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.pallidum:163

F6ZVR2              	100.00%		D3BB15              	100.00%
                    	       		D3BIM9              	29.80%
Bootstrap support for F6ZVR2 as seed ortholog is 99%.
Bootstrap support for D3BB15 as seed ortholog is 100%.

Group of orthologs #958. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 P.pallidum:181

F6TIU3              	100.00%		D3BT42              	100.00%
                    	       		D3BT43              	85.60%
Bootstrap support for F6TIU3 as seed ortholog is 99%.
Bootstrap support for D3BT42 as seed ortholog is 100%.

Group of orthologs #959. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 P.pallidum:235

F7A8J9              	100.00%		D3BLM9              	100.00%
F6YGN3              	14.37%		
Bootstrap support for F7A8J9 as seed ortholog is 100%.
Bootstrap support for D3BLM9 as seed ortholog is 100%.

Group of orthologs #960. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.pallidum:235

F7B1Y1              	100.00%		D3BV90              	100.00%
Q8I7D5              	87.93%		
Bootstrap support for F7B1Y1 as seed ortholog is 100%.
Bootstrap support for D3BV90 as seed ortholog is 100%.

Group of orthologs #961. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 P.pallidum:235

F6QAP0              	100.00%		D3B1M6              	100.00%
Bootstrap support for F6QAP0 as seed ortholog is 100%.
Bootstrap support for D3B1M6 as seed ortholog is 100%.

Group of orthologs #962. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 P.pallidum:24

F6W9T5              	100.00%		D3B5V9              	100.00%
Bootstrap support for F6W9T5 as seed ortholog is 56%.
Alternative seed ortholog is F6PQ74 (4 bits away from this cluster)
Bootstrap support for D3B5V9 as seed ortholog is 75%.

Group of orthologs #963. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 P.pallidum:235

F6V6F4              	100.00%		D3BBS3              	100.00%
Bootstrap support for F6V6F4 as seed ortholog is 100%.
Bootstrap support for D3BBS3 as seed ortholog is 100%.

Group of orthologs #964. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 P.pallidum:234

F6QWP6              	100.00%		D3AYZ9              	100.00%
Bootstrap support for F6QWP6 as seed ortholog is 100%.
Bootstrap support for D3AYZ9 as seed ortholog is 100%.

Group of orthologs #965. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 P.pallidum:234

F6UIW1              	100.00%		D3AYM5              	100.00%
Bootstrap support for F6UIW1 as seed ortholog is 100%.
Bootstrap support for D3AYM5 as seed ortholog is 100%.

Group of orthologs #966. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 P.pallidum:234

F6TJB5              	100.00%		D3BLD1              	100.00%
Bootstrap support for F6TJB5 as seed ortholog is 100%.
Bootstrap support for D3BLD1 as seed ortholog is 100%.

Group of orthologs #967. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 P.pallidum:234

F6UJD6              	100.00%		D3BJY4              	100.00%
Bootstrap support for F6UJD6 as seed ortholog is 100%.
Bootstrap support for D3BJY4 as seed ortholog is 100%.

Group of orthologs #968. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 P.pallidum:234

H2Y1D7              	100.00%		D3B7C4              	100.00%
Bootstrap support for H2Y1D7 as seed ortholog is 100%.
Bootstrap support for D3B7C4 as seed ortholog is 100%.

Group of orthologs #969. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 P.pallidum:78

F6WMB2              	100.00%		D3B8N7              	100.00%
                    	       		D3B6H5              	6.23%
Bootstrap support for F6WMB2 as seed ortholog is 81%.
Bootstrap support for D3B8N7 as seed ortholog is 95%.

Group of orthologs #970. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 P.pallidum:40

F6V299              	100.00%		D3BK41              	100.00%
Bootstrap support for F6V299 as seed ortholog is 61%.
Alternative seed ortholog is H2XZZ6 (8 bits away from this cluster)
Bootstrap support for D3BK41 as seed ortholog is 87%.

Group of orthologs #971. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.pallidum:49

H2XRU5              	100.00%		D3B0N1              	100.00%
Bootstrap support for H2XRU5 as seed ortholog is 100%.
Bootstrap support for D3B0N1 as seed ortholog is 99%.

Group of orthologs #972. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 P.pallidum:233

H2XX92              	100.00%		D3BN80              	100.00%
Bootstrap support for H2XX92 as seed ortholog is 100%.
Bootstrap support for D3BN80 as seed ortholog is 100%.

Group of orthologs #973. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 P.pallidum:232

F6QS20              	100.00%		D3B1A8              	100.00%
Bootstrap support for F6QS20 as seed ortholog is 100%.
Bootstrap support for D3B1A8 as seed ortholog is 100%.

Group of orthologs #974. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.pallidum:69

F7AFK8              	100.00%		D3B3T2              	100.00%
Bootstrap support for F7AFK8 as seed ortholog is 99%.
Bootstrap support for D3B3T2 as seed ortholog is 98%.

Group of orthologs #975. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 P.pallidum:57

F7B670              	100.00%		D3BQF5              	100.00%
Bootstrap support for F7B670 as seed ortholog is 100%.
Bootstrap support for D3BQF5 as seed ortholog is 94%.

Group of orthologs #976. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.pallidum:232

H2Y123              	100.00%		D3B9G4              	100.00%
Bootstrap support for H2Y123 as seed ortholog is 99%.
Bootstrap support for D3B9G4 as seed ortholog is 100%.

Group of orthologs #977. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 P.pallidum:231

F6T310              	100.00%		D3B0L6              	100.00%
Bootstrap support for F6T310 as seed ortholog is 80%.
Bootstrap support for D3B0L6 as seed ortholog is 100%.

Group of orthologs #978. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 P.pallidum:231

F6QQ08              	100.00%		D3BH65              	100.00%
Bootstrap support for F6QQ08 as seed ortholog is 100%.
Bootstrap support for D3BH65 as seed ortholog is 100%.

Group of orthologs #979. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 P.pallidum:231

F7B310              	100.00%		D3AZP7              	100.00%
Bootstrap support for F7B310 as seed ortholog is 100%.
Bootstrap support for D3AZP7 as seed ortholog is 100%.

Group of orthologs #980. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 P.pallidum:231

H2XLW7              	100.00%		D3B734              	100.00%
Bootstrap support for H2XLW7 as seed ortholog is 100%.
Bootstrap support for D3B734 as seed ortholog is 100%.

Group of orthologs #981. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.pallidum:94

F6U7X2              	100.00%		D3BC04              	100.00%
Bootstrap support for F6U7X2 as seed ortholog is 100%.
Bootstrap support for D3BC04 as seed ortholog is 99%.

Group of orthologs #982. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.pallidum:230

F7AH61              	100.00%		D3B454              	100.00%
Bootstrap support for F7AH61 as seed ortholog is 100%.
Bootstrap support for D3B454 as seed ortholog is 100%.

Group of orthologs #983. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.pallidum:230

F6Z1E3              	100.00%		D3BEH6              	100.00%
Bootstrap support for F6Z1E3 as seed ortholog is 100%.
Bootstrap support for D3BEH6 as seed ortholog is 100%.

Group of orthologs #984. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 P.pallidum:230

F7B4P8              	100.00%		D3BK89              	100.00%
Bootstrap support for F7B4P8 as seed ortholog is 100%.
Bootstrap support for D3BK89 as seed ortholog is 100%.

Group of orthologs #985. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 P.pallidum:229

F6ZS04              	100.00%		D3B1L8              	100.00%
Bootstrap support for F6ZS04 as seed ortholog is 100%.
Bootstrap support for D3B1L8 as seed ortholog is 100%.

Group of orthologs #986. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 P.pallidum:229

F6VKZ4              	100.00%		D3BHV4              	100.00%
Bootstrap support for F6VKZ4 as seed ortholog is 100%.
Bootstrap support for D3BHV4 as seed ortholog is 100%.

Group of orthologs #987. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 P.pallidum:229

F7B5Q2              	100.00%		D3B5F4              	100.00%
Bootstrap support for F7B5Q2 as seed ortholog is 100%.
Bootstrap support for D3B5F4 as seed ortholog is 100%.

Group of orthologs #988. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.pallidum:161

H2XZQ0              	100.00%		D3B763              	100.00%
Bootstrap support for H2XZQ0 as seed ortholog is 100%.
Bootstrap support for D3B763 as seed ortholog is 100%.

Group of orthologs #989. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 P.pallidum:229

H2XX22              	100.00%		D3BQV5              	100.00%
Bootstrap support for H2XX22 as seed ortholog is 100%.
Bootstrap support for D3BQV5 as seed ortholog is 100%.

Group of orthologs #990. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 P.pallidum:228

F6X0N8              	100.00%		D3B6Y3              	100.00%
L7N0S6              	80.15%		
Bootstrap support for F6X0N8 as seed ortholog is 100%.
Bootstrap support for D3B6Y3 as seed ortholog is 100%.

Group of orthologs #991. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 P.pallidum:228

F6RKR7              	100.00%		D3BIL7              	100.00%
Bootstrap support for F6RKR7 as seed ortholog is 100%.
Bootstrap support for D3BIL7 as seed ortholog is 100%.

Group of orthologs #992. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.pallidum:228

F6U6L5              	100.00%		D3BGU1              	100.00%
Bootstrap support for F6U6L5 as seed ortholog is 99%.
Bootstrap support for D3BGU1 as seed ortholog is 100%.

Group of orthologs #993. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 P.pallidum:228

F6XBT4              	100.00%		D3BBQ8              	100.00%
Bootstrap support for F6XBT4 as seed ortholog is 100%.
Bootstrap support for D3BBQ8 as seed ortholog is 100%.

Group of orthologs #994. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.pallidum:228

F6Z9J5              	100.00%		D3B8U6              	100.00%
Bootstrap support for F6Z9J5 as seed ortholog is 99%.
Bootstrap support for D3B8U6 as seed ortholog is 100%.

Group of orthologs #995. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.pallidum:103

F6S2W5              	100.00%		D3BR84              	100.00%
Bootstrap support for F6S2W5 as seed ortholog is 99%.
Bootstrap support for D3BR84 as seed ortholog is 100%.

Group of orthologs #996. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.pallidum:55

F7AG96              	100.00%		D3BAY1              	100.00%
Bootstrap support for F7AG96 as seed ortholog is 99%.
Bootstrap support for D3BAY1 as seed ortholog is 98%.

Group of orthologs #997. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 P.pallidum:228

F7AIP5              	100.00%		D3BAT4              	100.00%
Bootstrap support for F7AIP5 as seed ortholog is 100%.
Bootstrap support for D3BAT4 as seed ortholog is 100%.

Group of orthologs #998. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.pallidum:113

H2XW45              	100.00%		D3BAL9              	100.00%
Bootstrap support for H2XW45 as seed ortholog is 100%.
Bootstrap support for D3BAL9 as seed ortholog is 99%.

Group of orthologs #999. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 P.pallidum:227

F6WRV9              	100.00%		D3B885              	100.00%
F6YHL8              	39.97%		
Bootstrap support for F6WRV9 as seed ortholog is 100%.
Bootstrap support for D3B885 as seed ortholog is 100%.

Group of orthologs #1000. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 P.pallidum:227

F6YWB6              	100.00%		D3B3Q6              	100.00%
Bootstrap support for F6YWB6 as seed ortholog is 100%.
Bootstrap support for D3B3Q6 as seed ortholog is 100%.

Group of orthologs #1001. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.pallidum:18

F6XD08              	100.00%		D3BFN3              	100.00%
Bootstrap support for F6XD08 as seed ortholog is 92%.
Bootstrap support for D3BFN3 as seed ortholog is 77%.

Group of orthologs #1002. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 P.pallidum:46

H2XSL3              	100.00%		D3AZA3              	100.00%
Bootstrap support for H2XSL3 as seed ortholog is 100%.
Bootstrap support for D3AZA3 as seed ortholog is 89%.

Group of orthologs #1003. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 P.pallidum:65

F7ACJ3              	100.00%		D3BIZ5              	100.00%
Bootstrap support for F7ACJ3 as seed ortholog is 100%.
Bootstrap support for D3BIZ5 as seed ortholog is 93%.

Group of orthologs #1004. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.pallidum:61

F6Y403              	100.00%		D3BCD0              	100.00%
H2XPY5              	16.54%		
Bootstrap support for F6Y403 as seed ortholog is 94%.
Bootstrap support for D3BCD0 as seed ortholog is 90%.

Group of orthologs #1005. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.pallidum:35

F7AEF7              	100.00%		D3BQB6              	100.00%
                    	       		D3BQB2              	22.34%
Bootstrap support for F7AEF7 as seed ortholog is 83%.
Bootstrap support for D3BQB6 as seed ortholog is 80%.

Group of orthologs #1006. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.pallidum:45

F6Z3D0              	100.00%		D3B314              	100.00%
Bootstrap support for F6Z3D0 as seed ortholog is 84%.
Bootstrap support for D3B314 as seed ortholog is 90%.

Group of orthologs #1007. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.pallidum:226

F7AZT4              	100.00%		D3B1Z1              	100.00%
Bootstrap support for F7AZT4 as seed ortholog is 99%.
Bootstrap support for D3B1Z1 as seed ortholog is 100%.

Group of orthologs #1008. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 P.pallidum:75

F6V6S8              	100.00%		D3BU03              	100.00%
Bootstrap support for F6V6S8 as seed ortholog is 100%.
Bootstrap support for D3BU03 as seed ortholog is 99%.

Group of orthologs #1009. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 P.pallidum:225

I6L237              	100.00%		D3BMU4              	100.00%
F6RCC2              	94.57%		
Bootstrap support for I6L237 as seed ortholog is 100%.
Bootstrap support for D3BMU4 as seed ortholog is 100%.

Group of orthologs #1010. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 P.pallidum:225

F6ULQ2              	100.00%		D3B3I5              	100.00%
Bootstrap support for F6ULQ2 as seed ortholog is 85%.
Bootstrap support for D3B3I5 as seed ortholog is 100%.

Group of orthologs #1011. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 P.pallidum:225

F6Q4K7              	100.00%		D3BK61              	100.00%
Bootstrap support for F6Q4K7 as seed ortholog is 100%.
Bootstrap support for D3BK61 as seed ortholog is 100%.

Group of orthologs #1012. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 P.pallidum:225

F6ZTJ9              	100.00%		D3B052              	100.00%
Bootstrap support for F6ZTJ9 as seed ortholog is 100%.
Bootstrap support for D3B052 as seed ortholog is 100%.

Group of orthologs #1013. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.pallidum:171

F6PK80              	100.00%		D3AWU6              	100.00%
F6QWK4              	8.77%		D3AWU5              	29.24%
Bootstrap support for F6PK80 as seed ortholog is 99%.
Bootstrap support for D3AWU6 as seed ortholog is 99%.

Group of orthologs #1014. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 P.pallidum:224

F6T9R1              	100.00%		D3B615              	100.00%
Bootstrap support for F6T9R1 as seed ortholog is 100%.
Bootstrap support for D3B615 as seed ortholog is 100%.

Group of orthologs #1015. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 P.pallidum:170

F6TXW3              	100.00%		D3BHB9              	100.00%
Bootstrap support for F6TXW3 as seed ortholog is 100%.
Bootstrap support for D3BHB9 as seed ortholog is 100%.

Group of orthologs #1016. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.pallidum:100

H2XQB0              	100.00%		D3BFK6              	100.00%
Bootstrap support for H2XQB0 as seed ortholog is 99%.
Bootstrap support for D3BFK6 as seed ortholog is 99%.

Group of orthologs #1017. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.pallidum:156

F6X034              	100.00%		D3B6A7              	100.00%
Bootstrap support for F6X034 as seed ortholog is 100%.
Bootstrap support for D3B6A7 as seed ortholog is 99%.

Group of orthologs #1018. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.pallidum:223

F6TRN8              	100.00%		D3BF12              	100.00%
Bootstrap support for F6TRN8 as seed ortholog is 100%.
Bootstrap support for D3BF12 as seed ortholog is 100%.

Group of orthologs #1019. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.pallidum:223

F6Q4Z2              	100.00%		D3BS88              	100.00%
Bootstrap support for F6Q4Z2 as seed ortholog is 100%.
Bootstrap support for D3BS88 as seed ortholog is 100%.

Group of orthologs #1020. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.pallidum:223

H2XUQ0              	100.00%		D3B0E0              	100.00%
Bootstrap support for H2XUQ0 as seed ortholog is 100%.
Bootstrap support for D3B0E0 as seed ortholog is 100%.

Group of orthologs #1021. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.pallidum:223

H2XWD3              	100.00%		D3BCE5              	100.00%
Bootstrap support for H2XWD3 as seed ortholog is 100%.
Bootstrap support for D3BCE5 as seed ortholog is 100%.

Group of orthologs #1022. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.pallidum:170

H2XNI7              	100.00%		D3BV71              	100.00%
Bootstrap support for H2XNI7 as seed ortholog is 99%.
Bootstrap support for D3BV71 as seed ortholog is 99%.

Group of orthologs #1023. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 P.pallidum:223

H2XZV8              	100.00%		D3BMF6              	100.00%
Bootstrap support for H2XZV8 as seed ortholog is 100%.
Bootstrap support for D3BMF6 as seed ortholog is 100%.

Group of orthologs #1024. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.pallidum:7

H2XK16              	100.00%		D3BUT3              	100.00%
F7AHT0              	95.35%		
Bootstrap support for H2XK16 as seed ortholog is 100%.
Bootstrap support for D3BUT3 as seed ortholog is 63%.
Alternative seed ortholog is D3B633 (7 bits away from this cluster)

Group of orthologs #1025. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 P.pallidum:222

F6X5I5              	100.00%		D3AWQ4              	100.00%
Bootstrap support for F6X5I5 as seed ortholog is 84%.
Bootstrap support for D3AWQ4 as seed ortholog is 100%.

Group of orthologs #1026. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 P.pallidum:221

F6RZU6              	100.00%		D3BN47              	100.00%
Bootstrap support for F6RZU6 as seed ortholog is 100%.
Bootstrap support for D3BN47 as seed ortholog is 100%.

Group of orthologs #1027. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.pallidum:220

F7B690              	100.00%		D3AX75              	100.00%
Bootstrap support for F7B690 as seed ortholog is 100%.
Bootstrap support for D3AX75 as seed ortholog is 100%.

Group of orthologs #1028. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.pallidum:220

F6VUL9              	100.00%		D3BB06              	100.00%
Bootstrap support for F6VUL9 as seed ortholog is 100%.
Bootstrap support for D3BB06 as seed ortholog is 100%.

Group of orthologs #1029. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.pallidum:220

F6SFM0              	100.00%		D3BM67              	100.00%
Bootstrap support for F6SFM0 as seed ortholog is 100%.
Bootstrap support for D3BM67 as seed ortholog is 100%.

Group of orthologs #1030. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.pallidum:220

F7ASH4              	100.00%		D3B381              	100.00%
Bootstrap support for F7ASH4 as seed ortholog is 100%.
Bootstrap support for D3B381 as seed ortholog is 100%.

Group of orthologs #1031. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.pallidum:220

F6UP49              	100.00%		D3BT39              	100.00%
Bootstrap support for F6UP49 as seed ortholog is 100%.
Bootstrap support for D3BT39 as seed ortholog is 100%.

Group of orthologs #1032. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.pallidum:220

H2Y1K8              	100.00%		D3AXW6              	100.00%
Bootstrap support for H2Y1K8 as seed ortholog is 100%.
Bootstrap support for D3AXW6 as seed ortholog is 100%.

Group of orthologs #1033. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 P.pallidum:220

H2XP72              	100.00%		D3BCK9              	100.00%
Bootstrap support for H2XP72 as seed ortholog is 100%.
Bootstrap support for D3BCK9 as seed ortholog is 100%.

Group of orthologs #1034. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 P.pallidum:219

F6WY01              	100.00%		D3B0A3              	100.00%
Bootstrap support for F6WY01 as seed ortholog is 100%.
Bootstrap support for D3B0A3 as seed ortholog is 100%.

Group of orthologs #1035. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 P.pallidum:219

F6YYW3              	100.00%		D3AZZ3              	100.00%
Bootstrap support for F6YYW3 as seed ortholog is 100%.
Bootstrap support for D3AZZ3 as seed ortholog is 100%.

Group of orthologs #1036. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 P.pallidum:219

F6QWW6              	100.00%		D3BKB6              	100.00%
Bootstrap support for F6QWW6 as seed ortholog is 100%.
Bootstrap support for D3BKB6 as seed ortholog is 100%.

Group of orthologs #1037. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 P.pallidum:219

F6YTY3              	100.00%		D3B3T5              	100.00%
Bootstrap support for F6YTY3 as seed ortholog is 100%.
Bootstrap support for D3B3T5 as seed ortholog is 100%.

Group of orthologs #1038. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 P.pallidum:219

F6VKX1              	100.00%		D3BJV1              	100.00%
Bootstrap support for F6VKX1 as seed ortholog is 100%.
Bootstrap support for D3BJV1 as seed ortholog is 100%.

Group of orthologs #1039. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 P.pallidum:218

F6YW68              	100.00%		D3BNU1              	100.00%
Bootstrap support for F6YW68 as seed ortholog is 100%.
Bootstrap support for D3BNU1 as seed ortholog is 100%.

Group of orthologs #1040. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:217

F6Q5V5              	100.00%		D3B849              	100.00%
H2XRN5              	6.63%		
Bootstrap support for F6Q5V5 as seed ortholog is 99%.
Bootstrap support for D3B849 as seed ortholog is 100%.

Group of orthologs #1041. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.pallidum:97

F6U8M8              	100.00%		D3AX98              	100.00%
Bootstrap support for F6U8M8 as seed ortholog is 99%.
Bootstrap support for D3AX98 as seed ortholog is 100%.

Group of orthologs #1042. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 P.pallidum:217

F6RD37              	100.00%		D3B5I5              	100.00%
Bootstrap support for F6RD37 as seed ortholog is 100%.
Bootstrap support for D3B5I5 as seed ortholog is 100%.

Group of orthologs #1043. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 P.pallidum:217

F7AMR5              	100.00%		D3BFQ0              	100.00%
Bootstrap support for F7AMR5 as seed ortholog is 100%.
Bootstrap support for D3BFQ0 as seed ortholog is 100%.

Group of orthologs #1044. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 P.pallidum:217

H2XJG6              	100.00%		D3BQV7              	100.00%
Bootstrap support for H2XJG6 as seed ortholog is 100%.
Bootstrap support for D3BQV7 as seed ortholog is 100%.

Group of orthologs #1045. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 P.pallidum:217

H2XRS3              	100.00%		D3BV59              	100.00%
Bootstrap support for H2XRS3 as seed ortholog is 100%.
Bootstrap support for D3BV59 as seed ortholog is 100%.

Group of orthologs #1046. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 P.pallidum:216

F7AGW4              	100.00%		D3AZM2              	100.00%
Bootstrap support for F7AGW4 as seed ortholog is 100%.
Bootstrap support for D3AZM2 as seed ortholog is 100%.

Group of orthologs #1047. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 P.pallidum:216

F6PYR8              	100.00%		D3BP97              	100.00%
Bootstrap support for F6PYR8 as seed ortholog is 100%.
Bootstrap support for D3BP97 as seed ortholog is 100%.

Group of orthologs #1048. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 P.pallidum:216

F6U602              	100.00%		D3BMJ9              	100.00%
Bootstrap support for F6U602 as seed ortholog is 100%.
Bootstrap support for D3BMJ9 as seed ortholog is 100%.

Group of orthologs #1049. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 P.pallidum:216

F6WJQ0              	100.00%		D3BLP0              	100.00%
Bootstrap support for F6WJQ0 as seed ortholog is 100%.
Bootstrap support for D3BLP0 as seed ortholog is 100%.

Group of orthologs #1050. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.pallidum:215

F6TKP0              	100.00%		D3B167              	100.00%
F6TPL8              	100.00%		
F7B882              	77.29%		
F6SYX7              	21.38%		
F7AEB2              	6.43%		
Bootstrap support for F6TKP0 as seed ortholog is 99%.
Bootstrap support for F6TPL8 as seed ortholog is 99%.
Bootstrap support for D3B167 as seed ortholog is 100%.

Group of orthologs #1051. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.pallidum:101

H2XMB6              	100.00%		D3B850              	100.00%
                    	       		D3AXD1              	12.50%
Bootstrap support for H2XMB6 as seed ortholog is 100%.
Bootstrap support for D3B850 as seed ortholog is 99%.

Group of orthologs #1052. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 P.pallidum:215

F6QHG7              	100.00%		D3B6U5              	100.00%
Bootstrap support for F6QHG7 as seed ortholog is 100%.
Bootstrap support for D3B6U5 as seed ortholog is 100%.

Group of orthologs #1053. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 P.pallidum:215

F6PXD8              	100.00%		D3B9I5              	100.00%
Bootstrap support for F6PXD8 as seed ortholog is 100%.
Bootstrap support for D3B9I5 as seed ortholog is 100%.

Group of orthologs #1054. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 P.pallidum:214

H2XVM9              	100.00%		D3B571              	100.00%
                    	       		D3BV09              	13.77%
Bootstrap support for H2XVM9 as seed ortholog is 100%.
Bootstrap support for D3B571 as seed ortholog is 100%.

Group of orthologs #1055. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 P.pallidum:214

F7B658              	100.00%		D3AW31              	100.00%
Bootstrap support for F7B658 as seed ortholog is 100%.
Bootstrap support for D3AW31 as seed ortholog is 100%.

Group of orthologs #1056. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 P.pallidum:214

H2XKH3              	100.00%		D3AX20              	100.00%
Bootstrap support for H2XKH3 as seed ortholog is 75%.
Bootstrap support for D3AX20 as seed ortholog is 100%.

Group of orthologs #1057. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 P.pallidum:214

F6UP98              	100.00%		D3BF07              	100.00%
Bootstrap support for F6UP98 as seed ortholog is 100%.
Bootstrap support for D3BF07 as seed ortholog is 100%.

Group of orthologs #1058. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 P.pallidum:214

F6YG27              	100.00%		D3BI43              	100.00%
Bootstrap support for F6YG27 as seed ortholog is 100%.
Bootstrap support for D3BI43 as seed ortholog is 100%.

Group of orthologs #1059. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.pallidum:52

H2XRD4              	100.00%		D3B2T9              	100.00%
Bootstrap support for H2XRD4 as seed ortholog is 99%.
Bootstrap support for D3B2T9 as seed ortholog is 99%.

Group of orthologs #1060. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 P.pallidum:214

F6WYI2              	100.00%		D3BRL5              	100.00%
Bootstrap support for F6WYI2 as seed ortholog is 99%.
Bootstrap support for D3BRL5 as seed ortholog is 100%.

Group of orthologs #1061. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.pallidum:214

F6ZGS5              	100.00%		D3BR16              	100.00%
Bootstrap support for F6ZGS5 as seed ortholog is 100%.
Bootstrap support for D3BR16 as seed ortholog is 100%.

Group of orthologs #1062. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.pallidum:213

F6TGV4              	100.00%		D3B2T8              	100.00%
Bootstrap support for F6TGV4 as seed ortholog is 100%.
Bootstrap support for D3B2T8 as seed ortholog is 100%.

Group of orthologs #1063. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.pallidum:46

F6UK51              	100.00%		D3B7B4              	100.00%
Bootstrap support for F6UK51 as seed ortholog is 100%.
Bootstrap support for D3B7B4 as seed ortholog is 96%.

Group of orthologs #1064. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.pallidum:213

F6Q7D4              	100.00%		D3BH91              	100.00%
Bootstrap support for F6Q7D4 as seed ortholog is 100%.
Bootstrap support for D3BH91 as seed ortholog is 100%.

Group of orthologs #1065. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.pallidum:213

F6V4K8              	100.00%		D3BCA0              	100.00%
Bootstrap support for F6V4K8 as seed ortholog is 100%.
Bootstrap support for D3BCA0 as seed ortholog is 100%.

Group of orthologs #1066. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.pallidum:213

F6TKH9              	100.00%		D3BKA2              	100.00%
Bootstrap support for F6TKH9 as seed ortholog is 100%.
Bootstrap support for D3BKA2 as seed ortholog is 100%.

Group of orthologs #1067. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.pallidum:213

F6RU68              	100.00%		D3BPY5              	100.00%
Bootstrap support for F6RU68 as seed ortholog is 100%.
Bootstrap support for D3BPY5 as seed ortholog is 100%.

Group of orthologs #1068. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.pallidum:213

F6SSS9              	100.00%		D3BND0              	100.00%
Bootstrap support for F6SSS9 as seed ortholog is 100%.
Bootstrap support for D3BND0 as seed ortholog is 100%.

Group of orthologs #1069. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.pallidum:213

F6T2S3              	100.00%		D3BPW1              	100.00%
Bootstrap support for F6T2S3 as seed ortholog is 100%.
Bootstrap support for D3BPW1 as seed ortholog is 100%.

Group of orthologs #1070. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 P.pallidum:213

H2XY13              	100.00%		D3B137              	100.00%
Bootstrap support for H2XY13 as seed ortholog is 100%.
Bootstrap support for D3B137 as seed ortholog is 100%.

Group of orthologs #1071. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 P.pallidum:84

F6PXX9              	100.00%		D3B7C7              	100.00%
Bootstrap support for F6PXX9 as seed ortholog is 100%.
Bootstrap support for D3B7C7 as seed ortholog is 98%.

Group of orthologs #1072. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 P.pallidum:212

F6SYV7              	100.00%		D3B1R4              	100.00%
Bootstrap support for F6SYV7 as seed ortholog is 100%.
Bootstrap support for D3B1R4 as seed ortholog is 100%.

Group of orthologs #1073. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 P.pallidum:212

F6YGD1              	100.00%		D3AWZ9              	100.00%
Bootstrap support for F6YGD1 as seed ortholog is 100%.
Bootstrap support for D3AWZ9 as seed ortholog is 100%.

Group of orthologs #1074. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 P.pallidum:212

F6WU83              	100.00%		D3BLD4              	100.00%
Bootstrap support for F6WU83 as seed ortholog is 100%.
Bootstrap support for D3BLD4 as seed ortholog is 100%.

Group of orthologs #1075. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:59

F6XWG9              	100.00%		D3BQ39              	100.00%
Bootstrap support for F6XWG9 as seed ortholog is 96%.
Bootstrap support for D3BQ39 as seed ortholog is 97%.

Group of orthologs #1076. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 P.pallidum:212

F7AEV2              	100.00%		D3BN12              	100.00%
Bootstrap support for F7AEV2 as seed ortholog is 100%.
Bootstrap support for D3BN12 as seed ortholog is 100%.

Group of orthologs #1077. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 P.pallidum:211

F6RGI4              	100.00%		D3BPW6              	100.00%
Bootstrap support for F6RGI4 as seed ortholog is 100%.
Bootstrap support for D3BPW6 as seed ortholog is 100%.

Group of orthologs #1078. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 P.pallidum:142

F7AAN8              	100.00%		D3BFY9              	100.00%
H2XYH1              	60.30%		
Bootstrap support for F7AAN8 as seed ortholog is 77%.
Bootstrap support for D3BFY9 as seed ortholog is 100%.

Group of orthologs #1079. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 P.pallidum:210

F6X5M5              	100.00%		D3B567              	100.00%
Bootstrap support for F6X5M5 as seed ortholog is 100%.
Bootstrap support for D3B567 as seed ortholog is 100%.

Group of orthologs #1080. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 P.pallidum:210

F6YH10              	100.00%		D3B9D0              	100.00%
Bootstrap support for F6YH10 as seed ortholog is 100%.
Bootstrap support for D3B9D0 as seed ortholog is 100%.

Group of orthologs #1081. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.pallidum:210

F6Q5U4              	100.00%		D3BTD4              	100.00%
Bootstrap support for F6Q5U4 as seed ortholog is 99%.
Bootstrap support for D3BTD4 as seed ortholog is 100%.

Group of orthologs #1082. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.pallidum:138

F6QRJ2              	100.00%		D3BVF8              	100.00%
Bootstrap support for F6QRJ2 as seed ortholog is 99%.
Bootstrap support for D3BVF8 as seed ortholog is 99%.

Group of orthologs #1083. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.pallidum:210

F6Z8S6              	100.00%		D3BVK2              	100.00%
Bootstrap support for F6Z8S6 as seed ortholog is 98%.
Bootstrap support for D3BVK2 as seed ortholog is 100%.

Group of orthologs #1084. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 P.pallidum:210

Q1RQ01              	100.00%		D3BAN5              	100.00%
Bootstrap support for Q1RQ01 as seed ortholog is 100%.
Bootstrap support for D3BAN5 as seed ortholog is 100%.

Group of orthologs #1085. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 P.pallidum:209

H2XKK7              	100.00%		D3BGD2              	100.00%
F6SWY4              	5.35%		
F6Z370              	5.35%		
Bootstrap support for H2XKK7 as seed ortholog is 100%.
Bootstrap support for D3BGD2 as seed ortholog is 100%.

Group of orthologs #1086. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 P.pallidum:209

F6QAQ0              	100.00%		D3B081              	100.00%
Bootstrap support for F6QAQ0 as seed ortholog is 100%.
Bootstrap support for D3B081 as seed ortholog is 100%.

Group of orthologs #1087. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 P.pallidum:209

H2XUL1              	100.00%		D3B0P9              	100.00%
Bootstrap support for H2XUL1 as seed ortholog is 80%.
Bootstrap support for D3B0P9 as seed ortholog is 100%.

Group of orthologs #1088. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 P.pallidum:209

H2XTT5              	100.00%		D3B8K5              	100.00%
Bootstrap support for H2XTT5 as seed ortholog is 100%.
Bootstrap support for D3B8K5 as seed ortholog is 100%.

Group of orthologs #1089. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.pallidum:208

F6WZS8              	100.00%		D3B586              	100.00%
Bootstrap support for F6WZS8 as seed ortholog is 100%.
Bootstrap support for D3B586 as seed ortholog is 100%.

Group of orthologs #1090. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.pallidum:208

F6QAA1              	100.00%		D3BT91              	100.00%
Bootstrap support for F6QAA1 as seed ortholog is 100%.
Bootstrap support for D3BT91 as seed ortholog is 100%.

Group of orthologs #1091. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.pallidum:208

H2XMQ8              	100.00%		D3AZG4              	100.00%
Bootstrap support for H2XMQ8 as seed ortholog is 100%.
Bootstrap support for D3AZG4 as seed ortholog is 100%.

Group of orthologs #1092. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.pallidum:208

F6ZZZ6              	100.00%		D3BQF9              	100.00%
Bootstrap support for F6ZZZ6 as seed ortholog is 100%.
Bootstrap support for D3BQF9 as seed ortholog is 100%.

Group of orthologs #1093. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 P.pallidum:127

F6ZNA8              	100.00%		D3BV64              	100.00%
Bootstrap support for F6ZNA8 as seed ortholog is 100%.
Bootstrap support for D3BV64 as seed ortholog is 99%.

Group of orthologs #1094. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 P.pallidum:207

F6R5G5              	100.00%		D3AX96              	100.00%
Bootstrap support for F6R5G5 as seed ortholog is 99%.
Bootstrap support for D3AX96 as seed ortholog is 100%.

Group of orthologs #1095. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.pallidum:207

F6YIY8              	100.00%		D3AY95              	100.00%
Bootstrap support for F6YIY8 as seed ortholog is 100%.
Bootstrap support for D3AY95 as seed ortholog is 100%.

Group of orthologs #1096. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.pallidum:207

F7B499              	100.00%		D3AWH8              	100.00%
Bootstrap support for F7B499 as seed ortholog is 100%.
Bootstrap support for D3AWH8 as seed ortholog is 100%.

Group of orthologs #1097. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.pallidum:207

F6T7J7              	100.00%		D3BIL4              	100.00%
Bootstrap support for F6T7J7 as seed ortholog is 100%.
Bootstrap support for D3BIL4 as seed ortholog is 100%.

Group of orthologs #1098. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.pallidum:147

F6TKL9              	100.00%		D3BM60              	100.00%
Bootstrap support for F6TKL9 as seed ortholog is 100%.
Bootstrap support for D3BM60 as seed ortholog is 100%.

Group of orthologs #1099. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.pallidum:207

F6Y6W3              	100.00%		D3BDG0              	100.00%
Bootstrap support for F6Y6W3 as seed ortholog is 100%.
Bootstrap support for D3BDG0 as seed ortholog is 100%.

Group of orthologs #1100. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 P.pallidum:207

H2XSU1              	100.00%		D3B0F6              	100.00%
Bootstrap support for H2XSU1 as seed ortholog is 100%.
Bootstrap support for D3B0F6 as seed ortholog is 100%.

Group of orthologs #1101. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 P.pallidum:206

H2XU57              	100.00%		D3BBQ0              	100.00%
Q8I7D6              	97.89%		
Bootstrap support for H2XU57 as seed ortholog is 100%.
Bootstrap support for D3BBQ0 as seed ortholog is 100%.

Group of orthologs #1102. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 P.pallidum:206

F6Q9P1              	100.00%		D3B3B6              	100.00%
Bootstrap support for F6Q9P1 as seed ortholog is 100%.
Bootstrap support for D3B3B6 as seed ortholog is 100%.

Group of orthologs #1103. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.pallidum:80

F6TYS5              	100.00%		D3BH42              	100.00%
Bootstrap support for F6TYS5 as seed ortholog is 99%.
Bootstrap support for D3BH42 as seed ortholog is 99%.

Group of orthologs #1104. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 P.pallidum:206

H2XPN9              	100.00%		D3AVN8              	100.00%
Bootstrap support for H2XPN9 as seed ortholog is 100%.
Bootstrap support for D3AVN8 as seed ortholog is 100%.

Group of orthologs #1105. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.pallidum:205

F6URQ9              	100.00%		D3B5I1              	100.00%
Bootstrap support for F6URQ9 as seed ortholog is 100%.
Bootstrap support for D3B5I1 as seed ortholog is 100%.

Group of orthologs #1106. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:74

F6QMU4              	100.00%		D3BJA5              	100.00%
Bootstrap support for F6QMU4 as seed ortholog is 97%.
Bootstrap support for D3BJA5 as seed ortholog is 96%.

Group of orthologs #1107. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.pallidum:205

F6RSZ1              	100.00%		D3BMM7              	100.00%
Bootstrap support for F6RSZ1 as seed ortholog is 100%.
Bootstrap support for D3BMM7 as seed ortholog is 100%.

Group of orthologs #1108. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.pallidum:205

F6YA95              	100.00%		D3BAC6              	100.00%
Bootstrap support for F6YA95 as seed ortholog is 100%.
Bootstrap support for D3BAC6 as seed ortholog is 100%.

Group of orthologs #1109. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.pallidum:205

F6WTW2              	100.00%		D3BKT0              	100.00%
Bootstrap support for F6WTW2 as seed ortholog is 100%.
Bootstrap support for D3BKT0 as seed ortholog is 100%.

Group of orthologs #1110. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.pallidum:205

F6U019              	100.00%		D3BS99              	100.00%
Bootstrap support for F6U019 as seed ortholog is 100%.
Bootstrap support for D3BS99 as seed ortholog is 100%.

Group of orthologs #1111. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 P.pallidum:205

H2XT72              	100.00%		D3BGP1              	100.00%
Bootstrap support for H2XT72 as seed ortholog is 100%.
Bootstrap support for D3BGP1 as seed ortholog is 100%.

Group of orthologs #1112. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 P.pallidum:204

F6SSU2              	100.00%		D3AYL4              	100.00%
Bootstrap support for F6SSU2 as seed ortholog is 100%.
Bootstrap support for D3AYL4 as seed ortholog is 100%.

Group of orthologs #1113. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 P.pallidum:204

F6TAD8              	100.00%		D3B6U0              	100.00%
Bootstrap support for F6TAD8 as seed ortholog is 100%.
Bootstrap support for D3B6U0 as seed ortholog is 100%.

Group of orthologs #1114. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 P.pallidum:204

F6WK69              	100.00%		D3BC64              	100.00%
Bootstrap support for F6WK69 as seed ortholog is 100%.
Bootstrap support for D3BC64 as seed ortholog is 100%.

Group of orthologs #1115. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 P.pallidum:204

F6QBM2              	100.00%		D3BU31              	100.00%
Bootstrap support for F6QBM2 as seed ortholog is 100%.
Bootstrap support for D3BU31 as seed ortholog is 100%.

Group of orthologs #1116. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 P.pallidum:204

F6V6R4              	100.00%		D3BPI1              	100.00%
Bootstrap support for F6V6R4 as seed ortholog is 100%.
Bootstrap support for D3BPI1 as seed ortholog is 100%.

Group of orthologs #1117. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.pallidum:69

H2XNC4              	100.00%		D3B7X1              	100.00%
H2XUW8              	65.81%		D3B519              	9.12%
H2XQV4              	61.26%		D3AYH8              	8.44%
                    	       		D3BI50              	8.30%
Bootstrap support for H2XNC4 as seed ortholog is 100%.
Bootstrap support for D3B7X1 as seed ortholog is 93%.

Group of orthologs #1118. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.pallidum:203

F6REI3              	100.00%		D3B6N9              	100.00%
Bootstrap support for F6REI3 as seed ortholog is 100%.
Bootstrap support for D3B6N9 as seed ortholog is 100%.

Group of orthologs #1119. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.pallidum:203

F6RRF2              	100.00%		D3BML2              	100.00%
Bootstrap support for F6RRF2 as seed ortholog is 100%.
Bootstrap support for D3BML2 as seed ortholog is 100%.

Group of orthologs #1120. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.pallidum:203

F6R6C4              	100.00%		D3BQA1              	100.00%
Bootstrap support for F6R6C4 as seed ortholog is 100%.
Bootstrap support for D3BQA1 as seed ortholog is 100%.

Group of orthologs #1121. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.pallidum:141

F7BQ53              	100.00%		D3BCW0              	100.00%
Bootstrap support for F7BQ53 as seed ortholog is 100%.
Bootstrap support for D3BCW0 as seed ortholog is 99%.

Group of orthologs #1122. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.pallidum:203

F6ZD00              	100.00%		D3BLZ9              	100.00%
Bootstrap support for F6ZD00 as seed ortholog is 100%.
Bootstrap support for D3BLZ9 as seed ortholog is 100%.

Group of orthologs #1123. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 P.pallidum:50

F6YCY6              	100.00%		D3BQK6              	100.00%
Bootstrap support for F6YCY6 as seed ortholog is 67%.
Alternative seed ortholog is F6XYB7 (17 bits away from this cluster)
Bootstrap support for D3BQK6 as seed ortholog is 88%.

Group of orthologs #1124. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 P.pallidum:113

H2XUW1              	100.00%		D3BTX1              	100.00%
Bootstrap support for H2XUW1 as seed ortholog is 100%.
Bootstrap support for D3BTX1 as seed ortholog is 99%.

Group of orthologs #1125. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 P.pallidum:202

F6SGU7              	100.00%		D3AXS4              	100.00%
H2Y279              	9.42%		D3BT90              	6.36%
Bootstrap support for F6SGU7 as seed ortholog is 100%.
Bootstrap support for D3AXS4 as seed ortholog is 100%.

Group of orthologs #1126. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 P.pallidum:202

F6UJS3              	100.00%		D3BEA1              	100.00%
                    	       		D3B224              	5.12%
Bootstrap support for F6UJS3 as seed ortholog is 100%.
Bootstrap support for D3BEA1 as seed ortholog is 100%.

Group of orthologs #1127. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 P.pallidum:202

F6VIA9              	100.00%		D3BEW0              	100.00%
Bootstrap support for F6VIA9 as seed ortholog is 100%.
Bootstrap support for D3BEW0 as seed ortholog is 100%.

Group of orthologs #1128. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 P.pallidum:202

F6YUB3              	100.00%		D3BU33              	100.00%
Bootstrap support for F6YUB3 as seed ortholog is 100%.
Bootstrap support for D3BU33 as seed ortholog is 100%.

Group of orthologs #1129. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.pallidum:78

F6VL03              	100.00%		D3B6N1              	100.00%
F6YSJ3              	28.49%		
Q5SE06              	12.21%		
F6S1J5              	6.40%		
Bootstrap support for F6VL03 as seed ortholog is 98%.
Bootstrap support for D3B6N1 as seed ortholog is 97%.

Group of orthologs #1130. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 P.pallidum:201

F6SKI3              	100.00%		D3BH44              	100.00%
Bootstrap support for F6SKI3 as seed ortholog is 100%.
Bootstrap support for D3BH44 as seed ortholog is 100%.

Group of orthologs #1131. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.pallidum:83

F6VYD7              	100.00%		D3BHN0              	100.00%
F6W8H6              	80.90%		
H2XSP5              	52.55%		
Bootstrap support for F6VYD7 as seed ortholog is 90%.
Bootstrap support for D3BHN0 as seed ortholog is 97%.

Group of orthologs #1132. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.pallidum:128

H2Y2C6              	100.00%		D3BK86              	100.00%
F6W8D0              	6.00%		D3BG73              	17.97%
Bootstrap support for H2Y2C6 as seed ortholog is 96%.
Bootstrap support for D3BK86 as seed ortholog is 99%.

Group of orthologs #1133. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 P.pallidum:200

H2XZ54              	100.00%		D3AXW3              	100.00%
F6Y5Q3              	17.75%		
Bootstrap support for H2XZ54 as seed ortholog is 100%.
Bootstrap support for D3AXW3 as seed ortholog is 100%.

Group of orthologs #1134. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 P.pallidum:69

F6WPY5              	100.00%		D3BBZ9              	100.00%
Bootstrap support for F6WPY5 as seed ortholog is 100%.
Bootstrap support for D3BBZ9 as seed ortholog is 97%.

Group of orthologs #1135. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 P.pallidum:102

F6UHS2              	100.00%		D3BJW0              	100.00%
Bootstrap support for F6UHS2 as seed ortholog is 90%.
Bootstrap support for D3BJW0 as seed ortholog is 99%.

Group of orthologs #1136. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.pallidum:104

H2XPM6              	100.00%		D3B554              	100.00%
Bootstrap support for H2XPM6 as seed ortholog is 99%.
Bootstrap support for D3B554 as seed ortholog is 99%.

Group of orthologs #1137. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.pallidum:52

F6RS66              	100.00%		D3BEJ9              	100.00%
Bootstrap support for F6RS66 as seed ortholog is 99%.
Bootstrap support for D3BEJ9 as seed ortholog is 86%.

Group of orthologs #1138. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 P.pallidum:199

F7B2Q1              	100.00%		D3BCB9              	100.00%
Bootstrap support for F7B2Q1 as seed ortholog is 100%.
Bootstrap support for D3BCB9 as seed ortholog is 100%.

Group of orthologs #1139. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 P.pallidum:199

F6WVX7              	100.00%		D3BTP4              	100.00%
Bootstrap support for F6WVX7 as seed ortholog is 100%.
Bootstrap support for D3BTP4 as seed ortholog is 100%.

Group of orthologs #1140. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 P.pallidum:199

F6ZN66              	100.00%		D3BMQ1              	100.00%
Bootstrap support for F6ZN66 as seed ortholog is 100%.
Bootstrap support for D3BMQ1 as seed ortholog is 100%.

Group of orthologs #1141. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.pallidum:94

F6ZJP7              	100.00%		D3BSG7              	100.00%
Bootstrap support for F6ZJP7 as seed ortholog is 100%.
Bootstrap support for D3BSG7 as seed ortholog is 99%.

Group of orthologs #1142. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 P.pallidum:198

H2Y0N3              	100.00%		D3BBM6              	100.00%
F6PID9              	24.53%		
F6WI80              	22.38%		
F7AWK4              	21.86%		
H2XV50              	21.77%		
F6U005              	21.77%		
F6Z015              	15.66%		
Bootstrap support for H2Y0N3 as seed ortholog is 100%.
Bootstrap support for D3BBM6 as seed ortholog is 100%.

Group of orthologs #1143. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 P.pallidum:198

F7B4X6              	100.00%		D3B4H4              	100.00%
Bootstrap support for F7B4X6 as seed ortholog is 100%.
Bootstrap support for D3B4H4 as seed ortholog is 100%.

Group of orthologs #1144. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.pallidum:198

L7N0R5              	100.00%		D3BC96              	100.00%
Bootstrap support for L7N0R5 as seed ortholog is 99%.
Bootstrap support for D3BC96 as seed ortholog is 100%.

Group of orthologs #1145. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 P.pallidum:197

F6SWB6              	100.00%		D3AYY2              	100.00%
Bootstrap support for F6SWB6 as seed ortholog is 100%.
Bootstrap support for D3AYY2 as seed ortholog is 100%.

Group of orthologs #1146. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 P.pallidum:197

F7BDS7              	100.00%		D3AX29              	100.00%
Bootstrap support for F7BDS7 as seed ortholog is 100%.
Bootstrap support for D3AX29 as seed ortholog is 100%.

Group of orthologs #1147. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 P.pallidum:197

F6UA65              	100.00%		D3BHJ9              	100.00%
Bootstrap support for F6UA65 as seed ortholog is 100%.
Bootstrap support for D3BHJ9 as seed ortholog is 100%.

Group of orthologs #1148. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 P.pallidum:197

F6RYD4              	100.00%		D3BP48              	100.00%
Bootstrap support for F6RYD4 as seed ortholog is 100%.
Bootstrap support for D3BP48 as seed ortholog is 100%.

Group of orthologs #1149. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 P.pallidum:197

H2XK69              	100.00%		D3BQ00              	100.00%
Bootstrap support for H2XK69 as seed ortholog is 100%.
Bootstrap support for D3BQ00 as seed ortholog is 100%.

Group of orthologs #1150. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.pallidum:196

F7ANS1              	100.00%		D3BGZ6              	100.00%
F6R6X6              	21.40%		
F6ZDN7              	20.47%		
F6W5S5              	9.24%		
Bootstrap support for F7ANS1 as seed ortholog is 99%.
Bootstrap support for D3BGZ6 as seed ortholog is 100%.

Group of orthologs #1151. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.pallidum:196

F6VAW2              	100.00%		D3B838              	100.00%
Bootstrap support for F6VAW2 as seed ortholog is 100%.
Bootstrap support for D3B838 as seed ortholog is 100%.

Group of orthologs #1152. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.pallidum:196

F7B383              	100.00%		D3AZU6              	100.00%
Bootstrap support for F7B383 as seed ortholog is 100%.
Bootstrap support for D3AZU6 as seed ortholog is 100%.

Group of orthologs #1153. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.pallidum:196

F7ACG4              	100.00%		D3B3V7              	100.00%
Bootstrap support for F7ACG4 as seed ortholog is 100%.
Bootstrap support for D3B3V7 as seed ortholog is 100%.

Group of orthologs #1154. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.pallidum:196

F6R213              	100.00%		D3BRC0              	100.00%
Bootstrap support for F6R213 as seed ortholog is 100%.
Bootstrap support for D3BRC0 as seed ortholog is 100%.

Group of orthologs #1155. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.pallidum:196

F6VHI4              	100.00%		D3BIF0              	100.00%
Bootstrap support for F6VHI4 as seed ortholog is 100%.
Bootstrap support for D3BIF0 as seed ortholog is 100%.

Group of orthologs #1156. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.pallidum:196

F6X4K3              	100.00%		D3BU82              	100.00%
Bootstrap support for F6X4K3 as seed ortholog is 100%.
Bootstrap support for D3BU82 as seed ortholog is 100%.

Group of orthologs #1157. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.pallidum:129

H2XXA8              	100.00%		D3B9F2              	100.00%
Bootstrap support for H2XXA8 as seed ortholog is 99%.
Bootstrap support for D3B9F2 as seed ortholog is 99%.

Group of orthologs #1158. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 P.pallidum:63

H2Y2E8              	100.00%		D3BS60              	100.00%
Bootstrap support for H2Y2E8 as seed ortholog is 82%.
Bootstrap support for D3BS60 as seed ortholog is 94%.

Group of orthologs #1159. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 P.pallidum:196

I6L7H7              	100.00%		D3BT31              	100.00%
Bootstrap support for I6L7H7 as seed ortholog is 100%.
Bootstrap support for D3BT31 as seed ortholog is 100%.

Group of orthologs #1160. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.pallidum:195

H2XU55              	100.00%		D3BLU7              	100.00%
                    	       		D3BRB5              	56.70%
Bootstrap support for H2XU55 as seed ortholog is 100%.
Bootstrap support for D3BLU7 as seed ortholog is 100%.

Group of orthologs #1161. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.pallidum:195

F6QSK8              	100.00%		D3BI84              	100.00%
Bootstrap support for F6QSK8 as seed ortholog is 100%.
Bootstrap support for D3BI84 as seed ortholog is 100%.

Group of orthologs #1162. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.pallidum:195

F6YRR0              	100.00%		D3B4A0              	100.00%
Bootstrap support for F6YRR0 as seed ortholog is 100%.
Bootstrap support for D3B4A0 as seed ortholog is 100%.

Group of orthologs #1163. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.pallidum:195

F6W3C3              	100.00%		D3BJM4              	100.00%
Bootstrap support for F6W3C3 as seed ortholog is 100%.
Bootstrap support for D3BJM4 as seed ortholog is 100%.

Group of orthologs #1164. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.pallidum:195

H2XTF1              	100.00%		D3B2F2              	100.00%
Bootstrap support for H2XTF1 as seed ortholog is 100%.
Bootstrap support for D3B2F2 as seed ortholog is 100%.

Group of orthologs #1165. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.pallidum:195

F6XPZ4              	100.00%		D3BM88              	100.00%
Bootstrap support for F6XPZ4 as seed ortholog is 100%.
Bootstrap support for D3BM88 as seed ortholog is 100%.

Group of orthologs #1166. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 P.pallidum:195

F7ASB0              	100.00%		D3BPC7              	100.00%
Bootstrap support for F7ASB0 as seed ortholog is 100%.
Bootstrap support for D3BPC7 as seed ortholog is 100%.

Group of orthologs #1167. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.pallidum:61

F6XUY3              	100.00%		D3B3P3              	100.00%
F6S855              	63.83%		
F6S880              	56.80%		
F6W3Q9              	32.52%		
Bootstrap support for F6XUY3 as seed ortholog is 89%.
Bootstrap support for D3B3P3 as seed ortholog is 94%.

Group of orthologs #1168. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.pallidum:88

H2XVF8              	100.00%		D3AWL2              	100.00%
Bootstrap support for H2XVF8 as seed ortholog is 99%.
Bootstrap support for D3AWL2 as seed ortholog is 97%.

Group of orthologs #1169. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.pallidum:193

F6VAX6              	100.00%		D3BBX5              	100.00%
                    	       		D3BT53              	38.53%
Bootstrap support for F6VAX6 as seed ortholog is 97%.
Bootstrap support for D3BBX5 as seed ortholog is 100%.

Group of orthologs #1170. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.pallidum:193

H2XQS5              	100.00%		D3BFU9              	100.00%
F7ADF2              	55.51%		
Bootstrap support for H2XQS5 as seed ortholog is 100%.
Bootstrap support for D3BFU9 as seed ortholog is 100%.

Group of orthologs #1171. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.pallidum:193

F6VII3              	100.00%		D3AXC6              	100.00%
Bootstrap support for F6VII3 as seed ortholog is 100%.
Bootstrap support for D3AXC6 as seed ortholog is 100%.

Group of orthologs #1172. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.pallidum:193

F7AAC1              	100.00%		D3BD97              	100.00%
Bootstrap support for F7AAC1 as seed ortholog is 100%.
Bootstrap support for D3BD97 as seed ortholog is 100%.

Group of orthologs #1173. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.pallidum:193

F6Y6X7              	100.00%		D3BTU3              	100.00%
Bootstrap support for F6Y6X7 as seed ortholog is 100%.
Bootstrap support for D3BTU3 as seed ortholog is 100%.

Group of orthologs #1174. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.pallidum:193

F6YB67              	100.00%		D3BTV0              	100.00%
Bootstrap support for F6YB67 as seed ortholog is 100%.
Bootstrap support for D3BTV0 as seed ortholog is 100%.

Group of orthologs #1175. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 P.pallidum:193

F7AFF3              	100.00%		D3BPU5              	100.00%
Bootstrap support for F7AFF3 as seed ortholog is 100%.
Bootstrap support for D3BPU5 as seed ortholog is 100%.

Group of orthologs #1176. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 P.pallidum:192

F6Q021              	100.00%		D3B010              	100.00%
Bootstrap support for F6Q021 as seed ortholog is 100%.
Bootstrap support for D3B010 as seed ortholog is 100%.

Group of orthologs #1177. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 P.pallidum:192

F6WN54              	100.00%		D3AZ47              	100.00%
Bootstrap support for F6WN54 as seed ortholog is 100%.
Bootstrap support for D3AZ47 as seed ortholog is 100%.

Group of orthologs #1178. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 P.pallidum:192

F6YBU7              	100.00%		D3B6S2              	100.00%
Bootstrap support for F6YBU7 as seed ortholog is 100%.
Bootstrap support for D3B6S2 as seed ortholog is 100%.

Group of orthologs #1179. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 P.pallidum:131

F7APT3              	100.00%		D3B6E4              	100.00%
Bootstrap support for F7APT3 as seed ortholog is 100%.
Bootstrap support for D3B6E4 as seed ortholog is 100%.

Group of orthologs #1180. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.pallidum:191

F6TRZ2              	100.00%		D3AW01              	100.00%
Bootstrap support for F6TRZ2 as seed ortholog is 100%.
Bootstrap support for D3AW01 as seed ortholog is 100%.

Group of orthologs #1181. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.pallidum:75

F6RGE7              	100.00%		D3B2M5              	100.00%
Bootstrap support for F6RGE7 as seed ortholog is 99%.
Bootstrap support for D3B2M5 as seed ortholog is 99%.

Group of orthologs #1182. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.pallidum:191

F6UFA9              	100.00%		D3B1H2              	100.00%
Bootstrap support for F6UFA9 as seed ortholog is 100%.
Bootstrap support for D3B1H2 as seed ortholog is 100%.

Group of orthologs #1183. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.pallidum:191

F6S1K1              	100.00%		D3BE16              	100.00%
Bootstrap support for F6S1K1 as seed ortholog is 100%.
Bootstrap support for D3BE16 as seed ortholog is 100%.

Group of orthologs #1184. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.pallidum:145

F6S043              	100.00%		D3BE64              	100.00%
Bootstrap support for F6S043 as seed ortholog is 100%.
Bootstrap support for D3BE64 as seed ortholog is 99%.

Group of orthologs #1185. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.pallidum:38

F6S569              	100.00%		D3BEU9              	100.00%
Bootstrap support for F6S569 as seed ortholog is 99%.
Bootstrap support for D3BEU9 as seed ortholog is 95%.

Group of orthologs #1186. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.pallidum:96

F6UXG6              	100.00%		D3B9K9              	100.00%
Bootstrap support for F6UXG6 as seed ortholog is 99%.
Bootstrap support for D3B9K9 as seed ortholog is 99%.

Group of orthologs #1187. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.pallidum:29

F6TCR0              	100.00%		D3BQ64              	100.00%
Bootstrap support for F6TCR0 as seed ortholog is 99%.
Bootstrap support for D3BQ64 as seed ortholog is 50%.
Alternative seed ortholog is D3AXZ9 (29 bits away from this cluster)

Group of orthologs #1188. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.pallidum:91

H2XPL6              	100.00%		D3BBA4              	100.00%
Bootstrap support for H2XPL6 as seed ortholog is 99%.
Bootstrap support for D3BBA4 as seed ortholog is 99%.

Group of orthologs #1189. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 P.pallidum:191

F7AEP2              	100.00%		D3BKU3              	100.00%
Bootstrap support for F7AEP2 as seed ortholog is 100%.
Bootstrap support for D3BKU3 as seed ortholog is 100%.

Group of orthologs #1190. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 P.pallidum:92

F6YRX9              	100.00%		D3BEA8              	100.00%
F6TK16              	6.97%		
Bootstrap support for F6YRX9 as seed ortholog is 78%.
Bootstrap support for D3BEA8 as seed ortholog is 99%.

Group of orthologs #1191. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.pallidum:190

F6S6A5              	100.00%		D3BIR3              	100.00%
Bootstrap support for F6S6A5 as seed ortholog is 100%.
Bootstrap support for D3BIR3 as seed ortholog is 100%.

Group of orthologs #1192. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:190

F6SZE1              	100.00%		D3BU74              	100.00%
Bootstrap support for F6SZE1 as seed ortholog is 92%.
Bootstrap support for D3BU74 as seed ortholog is 100%.

Group of orthologs #1193. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 P.pallidum:190

H2Y3F6              	100.00%		D3BEP7              	100.00%
Bootstrap support for H2Y3F6 as seed ortholog is 100%.
Bootstrap support for D3BEP7 as seed ortholog is 100%.

Group of orthologs #1194. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 P.pallidum:189

F6VQX3              	100.00%		D3BSJ2              	100.00%
Bootstrap support for F6VQX3 as seed ortholog is 100%.
Bootstrap support for D3BSJ2 as seed ortholog is 100%.

Group of orthologs #1195. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.pallidum:188

F6T7E5              	100.00%		D3AZZ0              	100.00%
Bootstrap support for F6T7E5 as seed ortholog is 100%.
Bootstrap support for D3AZZ0 as seed ortholog is 100%.

Group of orthologs #1196. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.pallidum:114

F6QZ03              	100.00%		D3BFU7              	100.00%
Bootstrap support for F6QZ03 as seed ortholog is 100%.
Bootstrap support for D3BFU7 as seed ortholog is 99%.

Group of orthologs #1197. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.pallidum:188

F6SU61              	100.00%		D3BRK5              	100.00%
Bootstrap support for F6SU61 as seed ortholog is 99%.
Bootstrap support for D3BRK5 as seed ortholog is 100%.

Group of orthologs #1198. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.pallidum:188

F6XX66              	100.00%		D3BLA0              	100.00%
Bootstrap support for F6XX66 as seed ortholog is 100%.
Bootstrap support for D3BLA0 as seed ortholog is 100%.

Group of orthologs #1199. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.pallidum:188

F6ZSB0              	100.00%		D3BHL7              	100.00%
Bootstrap support for F6ZSB0 as seed ortholog is 100%.
Bootstrap support for D3BHL7 as seed ortholog is 100%.

Group of orthologs #1200. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.pallidum:188

H2Y0K3              	100.00%		D3BAZ2              	100.00%
Bootstrap support for H2Y0K3 as seed ortholog is 100%.
Bootstrap support for D3BAZ2 as seed ortholog is 100%.

Group of orthologs #1201. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 P.pallidum:188

H2XVM3              	100.00%		D3BNY6              	100.00%
Bootstrap support for H2XVM3 as seed ortholog is 100%.
Bootstrap support for D3BNY6 as seed ortholog is 100%.

Group of orthologs #1202. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.pallidum:10

F7BBQ5              	100.00%		D3BL27              	100.00%
F6YB01              	41.61%		
Bootstrap support for F7BBQ5 as seed ortholog is 100%.
Bootstrap support for D3BL27 as seed ortholog is 68%.
Alternative seed ortholog is D3BJU6 (10 bits away from this cluster)

Group of orthologs #1203. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.pallidum:187

F6TBF9              	100.00%		D3AVH8              	100.00%
Bootstrap support for F6TBF9 as seed ortholog is 100%.
Bootstrap support for D3AVH8 as seed ortholog is 100%.

Group of orthologs #1204. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:103

F6QSJ0              	100.00%		D3BF44              	100.00%
Bootstrap support for F6QSJ0 as seed ortholog is 84%.
Bootstrap support for D3BF44 as seed ortholog is 99%.

Group of orthologs #1205. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.pallidum:38

F7AHE1              	100.00%		D3B4E3              	100.00%
Bootstrap support for F7AHE1 as seed ortholog is 99%.
Bootstrap support for D3B4E3 as seed ortholog is 91%.

Group of orthologs #1206. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 P.pallidum:187

F6TB52              	100.00%		D3BQU5              	100.00%
Bootstrap support for F6TB52 as seed ortholog is 100%.
Bootstrap support for D3BQU5 as seed ortholog is 100%.

Group of orthologs #1207. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 P.pallidum:68

F6TL65              	100.00%		D3BVQ0              	46.55%
F7B9K0              	100.00%		D3B1Z2              	100.00%
F7A8I5              	100.00%		D3BBW1              	100.00%
F6WRT4              	100.00%		D3BSP5              	100.00%
F7AR76              	81.44%		D3BSP2              	89.40%
F6ZNW9              	50.36%		D3BR82              	36.47%
H2XRT7              	50.24%		D3AZN6              	35.02%
H2Y2D9              	48.56%		D3BR81              	33.61%
F6TL47              	47.73%		D3B1H8              	27.35%
F7BB38              	43.42%		D3BC34              	24.72%
F7A0M9              	30.98%		D3BC35              	24.22%
F6RLR6              	26.76%		D3AZN7              	24.04%
F6PUR6              	26.20%		D3B333              	23.84%
H2XMC8              	21.77%		D3BR59              	22.84%
F6QC31              	19.50%		D3B4T3              	21.08%
F6THU3              	19.26%		D3BC38              	18.40%
F6ZI41              	18.06%		D3B5Y3              	17.31%
H2Y3A4              	16.15%		D3B5Y4              	7.40%
H2XKK3              	13.88%		
F6UFN6              	13.52%		
F6ZC68              	12.32%		
F6TF08              	7.66%		
F6YVH4              	5.62%		
Bootstrap support for F6TL65 as seed ortholog is 75%.
Bootstrap support for F7B9K0 as seed ortholog is 76%.
Bootstrap support for F7A8I5 as seed ortholog is 65%.
Alternative seed ortholog is H2XYY3 (31 bits away from this cluster)
Bootstrap support for F6WRT4 as seed ortholog is 52%.
Alternative seed ortholog is H2XYY3 (31 bits away from this cluster)
Bootstrap support for D3B1Z2 as seed ortholog is 93%.
Bootstrap support for D3BBW1 as seed ortholog is 68%.
Alternative seed ortholog is D3AZI7 (68 bits away from this cluster)
Bootstrap support for D3BSP5 as seed ortholog is 59%.
Alternative seed ortholog is D3AZI7 (68 bits away from this cluster)

Group of orthologs #1208. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 P.pallidum:186

F6YPB8              	100.00%		D3B6J8              	100.00%
F6YLY7              	100.00%		D3BUI2              	100.00%
F6SD56              	50.71%		D3AY58              	47.65%
F6SNY7              	23.43%		D3BA42              	11.41%
F6WT59              	20.39%		D3B1E7              	7.38%
F6SNZ5              	5.53%		
Bootstrap support for F6YPB8 as seed ortholog is 100%.
Bootstrap support for F6YLY7 as seed ortholog is 100%.
Bootstrap support for D3B6J8 as seed ortholog is 100%.
Bootstrap support for D3BUI2 as seed ortholog is 100%.

Group of orthologs #1209. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.pallidum:186

F6PP61              	100.00%		D3AZF9              	100.00%
Bootstrap support for F6PP61 as seed ortholog is 100%.
Bootstrap support for D3AZF9 as seed ortholog is 100%.

Group of orthologs #1210. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 P.pallidum:186

F6QSC7              	100.00%		D3B429              	100.00%
Bootstrap support for F6QSC7 as seed ortholog is 100%.
Bootstrap support for D3B429 as seed ortholog is 100%.

Group of orthologs #1211. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 P.pallidum:186

F6SK91              	100.00%		D3B3D8              	100.00%
Bootstrap support for F6SK91 as seed ortholog is 100%.
Bootstrap support for D3B3D8 as seed ortholog is 100%.

Group of orthologs #1212. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 P.pallidum:186

F6SZQ5              	100.00%		D3B3C2              	100.00%
Bootstrap support for F6SZQ5 as seed ortholog is 100%.
Bootstrap support for D3B3C2 as seed ortholog is 100%.

Group of orthologs #1213. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 P.pallidum:186

F6W318              	100.00%		D3B790              	100.00%
Bootstrap support for F6W318 as seed ortholog is 100%.
Bootstrap support for D3B790 as seed ortholog is 100%.

Group of orthologs #1214. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 P.pallidum:186

H2XLX4              	100.00%		D3B864              	100.00%
Bootstrap support for H2XLX4 as seed ortholog is 100%.
Bootstrap support for D3B864 as seed ortholog is 100%.

Group of orthologs #1215. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 P.pallidum:186

H2XT92              	100.00%		D3BT27              	100.00%
Bootstrap support for H2XT92 as seed ortholog is 100%.
Bootstrap support for D3BT27 as seed ortholog is 100%.

Group of orthologs #1216. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.pallidum:186

H2Y233              	100.00%		D3BUN5              	100.00%
Bootstrap support for H2Y233 as seed ortholog is 100%.
Bootstrap support for D3BUN5 as seed ortholog is 100%.

Group of orthologs #1217. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 P.pallidum:93

F6PIZ2              	100.00%		D3BFJ2              	9.16%
H2XKN2              	100.00%		D3B5I3              	100.00%
                    	       		D3B4B6              	5.69%
Bootstrap support for F6PIZ2 as seed ortholog is 63%.
Alternative seed ortholog is F6W872 (14 bits away from this cluster)
Bootstrap support for H2XKN2 as seed ortholog is 65%.
Alternative seed ortholog is F6W872 (14 bits away from this cluster)
Bootstrap support for D3B5I3 as seed ortholog is 99%.

Group of orthologs #1218. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.pallidum:185

F7B5X2              	100.00%		D3BT95              	100.00%
                    	       		D3B5V0              	49.55%
                    	       		D3B0Y5              	36.96%
Bootstrap support for F7B5X2 as seed ortholog is 100%.
Bootstrap support for D3BT95 as seed ortholog is 100%.

Group of orthologs #1219. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.pallidum:130

F6WUC3              	100.00%		D3AXI5              	100.00%
Bootstrap support for F6WUC3 as seed ortholog is 99%.
Bootstrap support for D3AXI5 as seed ortholog is 99%.

Group of orthologs #1220. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.pallidum:185

F6UM67              	100.00%		D3BD25              	100.00%
Bootstrap support for F6UM67 as seed ortholog is 100%.
Bootstrap support for D3BD25 as seed ortholog is 100%.

Group of orthologs #1221. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 P.pallidum:185

F6X4T0              	100.00%		D3B963              	100.00%
Bootstrap support for F6X4T0 as seed ortholog is 100%.
Bootstrap support for D3B963 as seed ortholog is 100%.

Group of orthologs #1222. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.pallidum:129

F6Y8Y8              	100.00%		D3BQD0              	100.00%
Bootstrap support for F6Y8Y8 as seed ortholog is 100%.
Bootstrap support for D3BQD0 as seed ortholog is 100%.

Group of orthologs #1223. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.pallidum:89

H2XLK7              	100.00%		D3BPE3              	100.00%
Bootstrap support for H2XLK7 as seed ortholog is 100%.
Bootstrap support for D3BPE3 as seed ortholog is 100%.

Group of orthologs #1224. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.pallidum:184

H2XXR0              	100.00%		D3BGN7              	100.00%
H2Y171              	72.45%		D3BDA4              	17.95%
H2XVS1              	68.82%		
H2XJM1              	63.49%		
L7N0S0              	51.25%		
F6PLM8              	49.77%		
H2XW47              	10.54%		
Bootstrap support for H2XXR0 as seed ortholog is 89%.
Bootstrap support for D3BGN7 as seed ortholog is 100%.

Group of orthologs #1225. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 P.pallidum:184

F6PXA1              	100.00%		D3BCR2              	100.00%
Bootstrap support for F6PXA1 as seed ortholog is 100%.
Bootstrap support for D3BCR2 as seed ortholog is 100%.

Group of orthologs #1226. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 P.pallidum:184

H2XP26              	100.00%		D3BKX3              	100.00%
Bootstrap support for H2XP26 as seed ortholog is 100%.
Bootstrap support for D3BKX3 as seed ortholog is 100%.

Group of orthologs #1227. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 P.pallidum:184

F7AP04              	100.00%		D3BU02              	100.00%
Bootstrap support for F7AP04 as seed ortholog is 100%.
Bootstrap support for D3BU02 as seed ortholog is 100%.

Group of orthologs #1228. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.pallidum:183

F6PZT9              	100.00%		D3AWI1              	100.00%
Bootstrap support for F6PZT9 as seed ortholog is 100%.
Bootstrap support for D3AWI1 as seed ortholog is 100%.

Group of orthologs #1229. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.pallidum:64

F6UQ99              	100.00%		D3BAH5              	100.00%
Bootstrap support for F6UQ99 as seed ortholog is 97%.
Bootstrap support for D3BAH5 as seed ortholog is 96%.

Group of orthologs #1230. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.pallidum:183

F6UGM6              	100.00%		D3BBP3              	100.00%
Bootstrap support for F6UGM6 as seed ortholog is 100%.
Bootstrap support for D3BBP3 as seed ortholog is 100%.

Group of orthologs #1231. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.pallidum:183

F7B0F3              	100.00%		D3AY50              	100.00%
Bootstrap support for F7B0F3 as seed ortholog is 100%.
Bootstrap support for D3AY50 as seed ortholog is 100%.

Group of orthologs #1232. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.pallidum:87

F6Y043              	100.00%		D3BKH8              	100.00%
Bootstrap support for F6Y043 as seed ortholog is 96%.
Bootstrap support for D3BKH8 as seed ortholog is 98%.

Group of orthologs #1233. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.pallidum:14

H2Y320              	100.00%		D3AW80              	100.00%
Bootstrap support for H2Y320 as seed ortholog is 100%.
Bootstrap support for D3AW80 as seed ortholog is 69%.
Alternative seed ortholog is D3B3Q3 (14 bits away from this cluster)

Group of orthologs #1234. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.pallidum:183

F7AWS8              	100.00%		D3BGY8              	100.00%
Bootstrap support for F7AWS8 as seed ortholog is 99%.
Bootstrap support for D3BGY8 as seed ortholog is 100%.

Group of orthologs #1235. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.pallidum:183

F7ASX2              	100.00%		D3BLJ3              	100.00%
Bootstrap support for F7ASX2 as seed ortholog is 100%.
Bootstrap support for D3BLJ3 as seed ortholog is 100%.

Group of orthologs #1236. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 P.pallidum:183

H2XWQ2              	100.00%		D3BC43              	100.00%
Bootstrap support for H2XWQ2 as seed ortholog is 100%.
Bootstrap support for D3BC43 as seed ortholog is 100%.

Group of orthologs #1237. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.pallidum:39

F6QAM3              	100.00%		D3B816              	100.00%
F6QAL4              	87.30%		D3BJC9              	11.29%
F6X1X1              	39.53%		
F6X593              	10.38%		
F6SL89              	9.84%		
H2XX96              	5.90%		
Bootstrap support for F6QAM3 as seed ortholog is 100%.
Bootstrap support for D3B816 as seed ortholog is 78%.

Group of orthologs #1238. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.pallidum:182

F6QJB5              	100.00%		D3B2C1              	100.00%
Bootstrap support for F6QJB5 as seed ortholog is 100%.
Bootstrap support for D3B2C1 as seed ortholog is 100%.

Group of orthologs #1239. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.pallidum:182

F6VF91              	100.00%		D3AYZ5              	100.00%
Bootstrap support for F6VF91 as seed ortholog is 100%.
Bootstrap support for D3AYZ5 as seed ortholog is 100%.

Group of orthologs #1240. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.pallidum:182

F6S7T3              	100.00%		D3B7P9              	100.00%
Bootstrap support for F6S7T3 as seed ortholog is 100%.
Bootstrap support for D3B7P9 as seed ortholog is 100%.

Group of orthologs #1241. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.pallidum:182

F6QHP8              	100.00%		D3BCC1              	100.00%
Bootstrap support for F6QHP8 as seed ortholog is 100%.
Bootstrap support for D3BCC1 as seed ortholog is 100%.

Group of orthologs #1242. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 P.pallidum:182

F6THW7              	100.00%		D3BJ34              	100.00%
Bootstrap support for F6THW7 as seed ortholog is 99%.
Bootstrap support for D3BJ34 as seed ortholog is 100%.

Group of orthologs #1243. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.pallidum:182

H2XVJ7              	100.00%		D3AZI0              	100.00%
Bootstrap support for H2XVJ7 as seed ortholog is 100%.
Bootstrap support for D3AZI0 as seed ortholog is 100%.

Group of orthologs #1244. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.pallidum:182

F6V771              	100.00%		D3BVF2              	100.00%
Bootstrap support for F6V771 as seed ortholog is 100%.
Bootstrap support for D3BVF2 as seed ortholog is 100%.

Group of orthologs #1245. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 P.pallidum:182

F6YUN5              	100.00%		D3BRN9              	100.00%
Bootstrap support for F6YUN5 as seed ortholog is 100%.
Bootstrap support for D3BRN9 as seed ortholog is 100%.

Group of orthologs #1246. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 P.pallidum:37

F7ACS2              	100.00%		D3AWM0              	100.00%
                    	       		D3BAE9              	17.06%
Bootstrap support for F7ACS2 as seed ortholog is 100%.
Bootstrap support for D3AWM0 as seed ortholog is 85%.

Group of orthologs #1247. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.pallidum:181

F6QHM7              	100.00%		D3B9K1              	100.00%
Bootstrap support for F6QHM7 as seed ortholog is 95%.
Bootstrap support for D3B9K1 as seed ortholog is 100%.

Group of orthologs #1248. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.pallidum:80

F6WNP2              	100.00%		D3B1N0              	100.00%
Bootstrap support for F6WNP2 as seed ortholog is 89%.
Bootstrap support for D3B1N0 as seed ortholog is 97%.

Group of orthologs #1249. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 P.pallidum:181

F6XFA8              	100.00%		D3B266              	100.00%
Bootstrap support for F6XFA8 as seed ortholog is 85%.
Bootstrap support for D3B266 as seed ortholog is 100%.

Group of orthologs #1250. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.pallidum:181

F6U8U5              	100.00%		D3BEI2              	100.00%
Bootstrap support for F6U8U5 as seed ortholog is 99%.
Bootstrap support for D3BEI2 as seed ortholog is 100%.

Group of orthologs #1251. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 P.pallidum:181

F6RAN6              	100.00%		D3BNZ2              	100.00%
Bootstrap support for F6RAN6 as seed ortholog is 100%.
Bootstrap support for D3BNZ2 as seed ortholog is 100%.

Group of orthologs #1252. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 P.pallidum:181

H2XQG7              	100.00%		D3B4P2              	100.00%
Bootstrap support for H2XQG7 as seed ortholog is 100%.
Bootstrap support for D3B4P2 as seed ortholog is 100%.

Group of orthologs #1253. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.pallidum:181

H2XKP7              	100.00%		D3BAT0              	100.00%
Bootstrap support for H2XKP7 as seed ortholog is 99%.
Bootstrap support for D3BAT0 as seed ortholog is 100%.

Group of orthologs #1254. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.pallidum:181

H2Y197              	100.00%		D3BAH6              	100.00%
Bootstrap support for H2Y197 as seed ortholog is 100%.
Bootstrap support for D3BAH6 as seed ortholog is 100%.

Group of orthologs #1255. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 P.pallidum:139

H2XY27              	100.00%		D3BMX0              	100.00%
Bootstrap support for H2XY27 as seed ortholog is 100%.
Bootstrap support for D3BMX0 as seed ortholog is 100%.

Group of orthologs #1256. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 P.pallidum:8

F6PIE8              	100.00%		D3BRJ2              	100.00%
Bootstrap support for F6PIE8 as seed ortholog is 100%.
Bootstrap support for D3BRJ2 as seed ortholog is 49%.
Alternative seed ortholog is D3AVN2 (8 bits away from this cluster)

Group of orthologs #1257. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.pallidum:179

F6YGW9              	100.00%		D3BUM7              	100.00%
F6Y4T9              	31.30%		
Bootstrap support for F6YGW9 as seed ortholog is 99%.
Bootstrap support for D3BUM7 as seed ortholog is 100%.

Group of orthologs #1258. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.pallidum:179

F6V580              	100.00%		D3AYN0              	100.00%
Bootstrap support for F6V580 as seed ortholog is 100%.
Bootstrap support for D3AYN0 as seed ortholog is 100%.

Group of orthologs #1259. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.pallidum:179

F6UUL4              	100.00%		D3BCE9              	100.00%
Bootstrap support for F6UUL4 as seed ortholog is 100%.
Bootstrap support for D3BCE9 as seed ortholog is 100%.

Group of orthologs #1260. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.pallidum:138

F6VKI2              	100.00%		D3BCJ8              	100.00%
Bootstrap support for F6VKI2 as seed ortholog is 100%.
Bootstrap support for D3BCJ8 as seed ortholog is 99%.

Group of orthologs #1261. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.pallidum:179

F6XTQ1              	100.00%		D3B842              	100.00%
Bootstrap support for F6XTQ1 as seed ortholog is 100%.
Bootstrap support for D3B842 as seed ortholog is 100%.

Group of orthologs #1262. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.pallidum:179

F6T8R8              	100.00%		D3BNC7              	100.00%
Bootstrap support for F6T8R8 as seed ortholog is 100%.
Bootstrap support for D3BNC7 as seed ortholog is 100%.

Group of orthologs #1263. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.pallidum:179

F6S4V6              	100.00%		D3BRU8              	100.00%
Bootstrap support for F6S4V6 as seed ortholog is 80%.
Bootstrap support for D3BRU8 as seed ortholog is 100%.

Group of orthologs #1264. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 P.pallidum:83

H2XWT2              	100.00%		D3AWH3              	100.00%
Bootstrap support for H2XWT2 as seed ortholog is 98%.
Bootstrap support for D3AWH3 as seed ortholog is 99%.

Group of orthologs #1265. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 P.pallidum:179

F6YPB3              	100.00%		D3BN97              	100.00%
Bootstrap support for F6YPB3 as seed ortholog is 100%.
Bootstrap support for D3BN97 as seed ortholog is 100%.

Group of orthologs #1266. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 P.pallidum:93

F6X3X4              	100.00%		D3BUR4              	100.00%
Bootstrap support for F6X3X4 as seed ortholog is 71%.
Alternative seed ortholog is F7A8Z2 (14 bits away from this cluster)
Bootstrap support for D3BUR4 as seed ortholog is 99%.

Group of orthologs #1267. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.pallidum:42

H2XZG7              	100.00%		D3BCG7              	100.00%
Bootstrap support for H2XZG7 as seed ortholog is 99%.
Bootstrap support for D3BCG7 as seed ortholog is 98%.

Group of orthologs #1268. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:178

F6SRA1              	100.00%		D3BN32              	100.00%
H2Y385              	7.47%		D3B294              	61.45%
                    	       		D3BN31              	48.79%
Bootstrap support for F6SRA1 as seed ortholog is 88%.
Bootstrap support for D3BN32 as seed ortholog is 100%.

Group of orthologs #1269. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 P.pallidum:73

F6QZM4              	100.00%		D3BJU4              	100.00%
H2XP52              	100.00%		D3BAU0              	28.25%
Bootstrap support for F6QZM4 as seed ortholog is 67%.
Alternative seed ortholog is F6TMT5 (14 bits away from this cluster)
Bootstrap support for H2XP52 as seed ortholog is 71%.
Alternative seed ortholog is F6TMT5 (14 bits away from this cluster)
Bootstrap support for D3BJU4 as seed ortholog is 99%.

Group of orthologs #1270. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.pallidum:178

F6THX7              	100.00%		D3AWB0              	100.00%
Bootstrap support for F6THX7 as seed ortholog is 100%.
Bootstrap support for D3AWB0 as seed ortholog is 100%.

Group of orthologs #1271. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.pallidum:178

F6PKT6              	100.00%		D3BD59              	100.00%
Bootstrap support for F6PKT6 as seed ortholog is 100%.
Bootstrap support for D3BD59 as seed ortholog is 100%.

Group of orthologs #1272. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.pallidum:52

F6U1Q3              	100.00%		D3BGS2              	100.00%
Bootstrap support for F6U1Q3 as seed ortholog is 99%.
Bootstrap support for D3BGS2 as seed ortholog is 96%.

Group of orthologs #1273. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.pallidum:97

F6WY47              	100.00%		D3BEQ6              	100.00%
Bootstrap support for F6WY47 as seed ortholog is 100%.
Bootstrap support for D3BEQ6 as seed ortholog is 99%.

Group of orthologs #1274. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.pallidum:178

F6ZCL3              	100.00%		D3B9C0              	100.00%
Bootstrap support for F6ZCL3 as seed ortholog is 100%.
Bootstrap support for D3B9C0 as seed ortholog is 100%.

Group of orthologs #1275. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.pallidum:178

F7B3X8              	100.00%		D3B6M1              	100.00%
Bootstrap support for F7B3X8 as seed ortholog is 100%.
Bootstrap support for D3B6M1 as seed ortholog is 100%.

Group of orthologs #1276. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.pallidum:178

H2XQ06              	100.00%		D3BEM3              	100.00%
Bootstrap support for H2XQ06 as seed ortholog is 99%.
Bootstrap support for D3BEM3 as seed ortholog is 100%.

Group of orthologs #1277. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.pallidum:178

H2XT70              	100.00%		D3BG91              	100.00%
Bootstrap support for H2XT70 as seed ortholog is 100%.
Bootstrap support for D3BG91 as seed ortholog is 100%.

Group of orthologs #1278. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.pallidum:178

H2XQ91              	100.00%		D3BR12              	100.00%
Bootstrap support for H2XQ91 as seed ortholog is 99%.
Bootstrap support for D3BR12 as seed ortholog is 100%.

Group of orthologs #1279. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 P.pallidum:178

H2XSX6              	100.00%		D3BPL5              	100.00%
Bootstrap support for H2XSX6 as seed ortholog is 100%.
Bootstrap support for D3BPL5 as seed ortholog is 100%.

Group of orthologs #1280. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 P.pallidum:177

F6V9A1              	100.00%		D3AW89              	100.00%
Bootstrap support for F6V9A1 as seed ortholog is 100%.
Bootstrap support for D3AW89 as seed ortholog is 100%.

Group of orthologs #1281. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 P.pallidum:177

F6SW03              	100.00%		D3B4P8              	100.00%
Bootstrap support for F6SW03 as seed ortholog is 100%.
Bootstrap support for D3B4P8 as seed ortholog is 100%.

Group of orthologs #1282. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 P.pallidum:177

F6X4A0              	100.00%		D3B2G1              	100.00%
Bootstrap support for F6X4A0 as seed ortholog is 100%.
Bootstrap support for D3B2G1 as seed ortholog is 100%.

Group of orthologs #1283. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.pallidum:177

F6Q1G7              	100.00%		D3BLY0              	100.00%
Bootstrap support for F6Q1G7 as seed ortholog is 99%.
Bootstrap support for D3BLY0 as seed ortholog is 100%.

Group of orthologs #1284. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 P.pallidum:177

F6SXZ3              	100.00%		D3BGD8              	100.00%
Bootstrap support for F6SXZ3 as seed ortholog is 100%.
Bootstrap support for D3BGD8 as seed ortholog is 100%.

Group of orthologs #1285. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 P.pallidum:177

F6UA38              	100.00%		D3BEA6              	100.00%
Bootstrap support for F6UA38 as seed ortholog is 100%.
Bootstrap support for D3BEA6 as seed ortholog is 100%.

Group of orthologs #1286. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.pallidum:14

F7AXK5              	100.00%		D3BB43              	100.00%
F6V6J6              	11.05%		D3BB55              	70.68%
F6U1X0              	8.07%		D3BJD4              	39.52%
                    	       		D3BJH4              	15.74%
                    	       		D3BCX6              	6.08%
Bootstrap support for F7AXK5 as seed ortholog is 100%.
Bootstrap support for D3BB43 as seed ortholog is 59%.
Alternative seed ortholog is D3BJZ1 (14 bits away from this cluster)

Group of orthologs #1287. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.pallidum:176

F6RCD1              	100.00%		D3B5H1              	100.00%
Bootstrap support for F6RCD1 as seed ortholog is 100%.
Bootstrap support for D3B5H1 as seed ortholog is 100%.

Group of orthologs #1288. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.pallidum:62

F6TLE4              	100.00%		D3BRD6              	100.00%
Bootstrap support for F6TLE4 as seed ortholog is 100%.
Bootstrap support for D3BRD6 as seed ortholog is 97%.

Group of orthologs #1289. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.pallidum:96

F6SN27              	100.00%		D3BVF6              	100.00%
Bootstrap support for F6SN27 as seed ortholog is 100%.
Bootstrap support for D3BVF6 as seed ortholog is 99%.

Group of orthologs #1290. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.pallidum:40

F6X8B5              	100.00%		D3BN28              	100.00%
Bootstrap support for F6X8B5 as seed ortholog is 100%.
Bootstrap support for D3BN28 as seed ortholog is 83%.

Group of orthologs #1291. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 P.pallidum:176

H2Y1I3              	100.00%		D3BQQ5              	100.00%
Bootstrap support for H2Y1I3 as seed ortholog is 100%.
Bootstrap support for D3BQQ5 as seed ortholog is 100%.

Group of orthologs #1292. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 P.pallidum:176

Q4H2I7              	100.00%		D3BRH9              	100.00%
Bootstrap support for Q4H2I7 as seed ortholog is 100%.
Bootstrap support for D3BRH9 as seed ortholog is 100%.

Group of orthologs #1293. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 P.pallidum:175

F6VZA9              	100.00%		D3BB60              	100.00%
F6SJY8              	36.65%		
Bootstrap support for F6VZA9 as seed ortholog is 100%.
Bootstrap support for D3BB60 as seed ortholog is 100%.

Group of orthologs #1294. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 P.pallidum:175

F6PMD1              	100.00%		D3B7S7              	100.00%
Bootstrap support for F6PMD1 as seed ortholog is 100%.
Bootstrap support for D3B7S7 as seed ortholog is 100%.

Group of orthologs #1295. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 P.pallidum:175

F6RXW9              	100.00%		D3B6L1              	100.00%
Bootstrap support for F6RXW9 as seed ortholog is 100%.
Bootstrap support for D3B6L1 as seed ortholog is 100%.

Group of orthologs #1296. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.pallidum:9

F6RGX1              	100.00%		D3B8B5              	100.00%
Bootstrap support for F6RGX1 as seed ortholog is 100%.
Bootstrap support for D3B8B5 as seed ortholog is 34%.
Alternative seed ortholog is D3B747 (9 bits away from this cluster)

Group of orthologs #1297. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.pallidum:62

F6YGF8              	100.00%		D3BCL8              	100.00%
Bootstrap support for F6YGF8 as seed ortholog is 99%.
Bootstrap support for D3BCL8 as seed ortholog is 97%.

Group of orthologs #1298. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.pallidum:175

F6S8Y1              	100.00%		D3BRT8              	100.00%
Bootstrap support for F6S8Y1 as seed ortholog is 99%.
Bootstrap support for D3BRT8 as seed ortholog is 100%.

Group of orthologs #1299. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 P.pallidum:175

F6W2L5              	100.00%		D3BSN4              	100.00%
Bootstrap support for F6W2L5 as seed ortholog is 100%.
Bootstrap support for D3BSN4 as seed ortholog is 100%.

Group of orthologs #1300. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.pallidum:91

H2XNZ7              	100.00%		D3BGC7              	100.00%
Bootstrap support for H2XNZ7 as seed ortholog is 99%.
Bootstrap support for D3BGC7 as seed ortholog is 99%.

Group of orthologs #1301. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 P.pallidum:175

H2XXH1              	100.00%		D3BHJ3              	100.00%
Bootstrap support for H2XXH1 as seed ortholog is 100%.
Bootstrap support for D3BHJ3 as seed ortholog is 100%.

Group of orthologs #1302. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 P.pallidum:174

F6ZIP1              	100.00%		D3BGI1              	100.00%
                    	       		D3BSZ1              	18.58%
                    	       		D3B8C9              	14.09%
Bootstrap support for F6ZIP1 as seed ortholog is 83%.
Bootstrap support for D3BGI1 as seed ortholog is 100%.

Group of orthologs #1303. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.pallidum:174

F6PIG9              	100.00%		D3BNN1              	100.00%
Bootstrap support for F6PIG9 as seed ortholog is 100%.
Bootstrap support for D3BNN1 as seed ortholog is 100%.

Group of orthologs #1304. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.pallidum:174

F6XHE4              	100.00%		D3B716              	100.00%
Bootstrap support for F6XHE4 as seed ortholog is 100%.
Bootstrap support for D3B716 as seed ortholog is 100%.

Group of orthologs #1305. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.pallidum:174

F7A5A0              	100.00%		D3B645              	100.00%
Bootstrap support for F7A5A0 as seed ortholog is 100%.
Bootstrap support for D3B645 as seed ortholog is 100%.

Group of orthologs #1306. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.pallidum:107

F6ZP02              	100.00%		D3BAL0              	100.00%
Bootstrap support for F6ZP02 as seed ortholog is 100%.
Bootstrap support for D3BAL0 as seed ortholog is 99%.

Group of orthologs #1307. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 P.pallidum:117

H2XX16              	100.00%		D3B5H2              	100.00%
Bootstrap support for H2XX16 as seed ortholog is 100%.
Bootstrap support for D3B5H2 as seed ortholog is 99%.

Group of orthologs #1308. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 P.pallidum:173

F6YLC1              	100.00%		D3B439              	100.00%
Bootstrap support for F6YLC1 as seed ortholog is 100%.
Bootstrap support for D3B439 as seed ortholog is 100%.

Group of orthologs #1309. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 P.pallidum:173

F6U8Q9              	100.00%		D3BJR6              	100.00%
Bootstrap support for F6U8Q9 as seed ortholog is 74%.
Alternative seed ortholog is F6R8G4 (26 bits away from this cluster)
Bootstrap support for D3BJR6 as seed ortholog is 100%.

Group of orthologs #1310. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 P.pallidum:67

F6ZK14              	100.00%		D3BFT0              	100.00%
Bootstrap support for F6ZK14 as seed ortholog is 100%.
Bootstrap support for D3BFT0 as seed ortholog is 97%.

Group of orthologs #1311. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 P.pallidum:173

F6XN50              	100.00%		D3BKI9              	100.00%
Bootstrap support for F6XN50 as seed ortholog is 100%.
Bootstrap support for D3BKI9 as seed ortholog is 100%.

Group of orthologs #1312. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 P.pallidum:173

F6ZBY5              	100.00%		D3BIE2              	100.00%
Bootstrap support for F6ZBY5 as seed ortholog is 100%.
Bootstrap support for D3BIE2 as seed ortholog is 100%.

Group of orthologs #1313. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 P.pallidum:173

F6YAY9              	100.00%		D3BLS8              	100.00%
Bootstrap support for F6YAY9 as seed ortholog is 100%.
Bootstrap support for D3BLS8 as seed ortholog is 100%.

Group of orthologs #1314. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.pallidum:172

F6V7V1              	100.00%		D3AWW8              	100.00%
                    	       		D3B083              	42.33%
                    	       		D3B746              	24.28%
                    	       		D3BGR3              	20.00%
                    	       		D3BID2              	13.23%
Bootstrap support for F6V7V1 as seed ortholog is 98%.
Bootstrap support for D3AWW8 as seed ortholog is 100%.

Group of orthologs #1315. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 P.pallidum:172

F6R982              	100.00%		D3AYE5              	100.00%
Bootstrap support for F6R982 as seed ortholog is 100%.
Bootstrap support for D3AYE5 as seed ortholog is 100%.

Group of orthologs #1316. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 P.pallidum:172

F7BQ69              	100.00%		D3BAW8              	100.00%
Bootstrap support for F7BQ69 as seed ortholog is 100%.
Bootstrap support for D3BAW8 as seed ortholog is 100%.

Group of orthologs #1317. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 P.pallidum:171

H2XQT4              	100.00%		D3BQN4              	100.00%
F7AM82              	16.43%		
Bootstrap support for H2XQT4 as seed ortholog is 76%.
Bootstrap support for D3BQN4 as seed ortholog is 100%.

Group of orthologs #1318. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.pallidum:171

F6X3Q7              	100.00%		D3AYW2              	100.00%
Bootstrap support for F6X3Q7 as seed ortholog is 100%.
Bootstrap support for D3AYW2 as seed ortholog is 100%.

Group of orthologs #1319. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.pallidum:171

F6YZ22              	100.00%		D3B6B2              	100.00%
Bootstrap support for F6YZ22 as seed ortholog is 100%.
Bootstrap support for D3B6B2 as seed ortholog is 100%.

Group of orthologs #1320. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.pallidum:15

F6TAK3              	100.00%		D3BQA8              	100.00%
Bootstrap support for F6TAK3 as seed ortholog is 100%.
Bootstrap support for D3BQA8 as seed ortholog is 83%.

Group of orthologs #1321. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.pallidum:171

H2XUU5              	100.00%		D3AWA8              	100.00%
Bootstrap support for H2XUU5 as seed ortholog is 100%.
Bootstrap support for D3AWA8 as seed ortholog is 100%.

Group of orthologs #1322. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.pallidum:171

F6Z8N3              	100.00%		D3BLM4              	100.00%
Bootstrap support for F6Z8N3 as seed ortholog is 100%.
Bootstrap support for D3BLM4 as seed ortholog is 100%.

Group of orthologs #1323. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:171

F6XGT9              	100.00%		D3BVR4              	100.00%
Bootstrap support for F6XGT9 as seed ortholog is 99%.
Bootstrap support for D3BVR4 as seed ortholog is 100%.

Group of orthologs #1324. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 P.pallidum:171

H2Y1I8              	100.00%		D3BPW2              	100.00%
Bootstrap support for H2Y1I8 as seed ortholog is 100%.
Bootstrap support for D3BPW2 as seed ortholog is 100%.

Group of orthologs #1325. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 P.pallidum:170

F6QL68              	100.00%		D3B6K0              	100.00%
H2XV03              	12.84%		
F6XMR8              	12.42%		
H2XLV8              	8.49%		
Bootstrap support for F6QL68 as seed ortholog is 64%.
Alternative seed ortholog is H2Y1M2 (16 bits away from this cluster)
Bootstrap support for D3B6K0 as seed ortholog is 100%.

Group of orthologs #1326. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 P.pallidum:170

H2XM50              	100.00%		D3BD72              	100.00%
F6R614              	50.78%		
Bootstrap support for H2XM50 as seed ortholog is 100%.
Bootstrap support for D3BD72 as seed ortholog is 100%.

Group of orthologs #1327. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 P.pallidum:170

F6SJ18              	100.00%		D3AY13              	100.00%
Bootstrap support for F6SJ18 as seed ortholog is 100%.
Bootstrap support for D3AY13 as seed ortholog is 100%.

Group of orthologs #1328. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.pallidum:64

F6QEE3              	100.00%		D3BQN3              	100.00%
Bootstrap support for F6QEE3 as seed ortholog is 99%.
Bootstrap support for D3BQN3 as seed ortholog is 97%.

Group of orthologs #1329. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 P.pallidum:170

H2XLH0              	100.00%		D3B482              	100.00%
Bootstrap support for H2XLH0 as seed ortholog is 100%.
Bootstrap support for D3B482 as seed ortholog is 100%.

Group of orthologs #1330. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 P.pallidum:170

F7ASM2              	100.00%		D3BDL0              	100.00%
Bootstrap support for F7ASM2 as seed ortholog is 100%.
Bootstrap support for D3BDL0 as seed ortholog is 100%.

Group of orthologs #1331. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 P.pallidum:170

F7BBV8              	100.00%		D3BF50              	100.00%
Bootstrap support for F7BBV8 as seed ortholog is 100%.
Bootstrap support for D3BF50 as seed ortholog is 100%.

Group of orthologs #1332. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 P.pallidum:169

F6QE62              	100.00%		D3B7M3              	100.00%
Bootstrap support for F6QE62 as seed ortholog is 100%.
Bootstrap support for D3B7M3 as seed ortholog is 100%.

Group of orthologs #1333. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 P.pallidum:169

F6ZPU3              	100.00%		D3B1P5              	100.00%
Bootstrap support for F6ZPU3 as seed ortholog is 100%.
Bootstrap support for D3B1P5 as seed ortholog is 100%.

Group of orthologs #1334. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 P.pallidum:168

F6UE58              	100.00%		D3B8W2              	100.00%
Bootstrap support for F6UE58 as seed ortholog is 87%.
Bootstrap support for D3B8W2 as seed ortholog is 100%.

Group of orthologs #1335. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.pallidum:44

F6VLD0              	100.00%		D3BDR5              	100.00%
Bootstrap support for F6VLD0 as seed ortholog is 100%.
Bootstrap support for D3BDR5 as seed ortholog is 95%.

Group of orthologs #1336. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 P.pallidum:168

F7B3M4              	100.00%		D3B6L2              	100.00%
Bootstrap support for F7B3M4 as seed ortholog is 100%.
Bootstrap support for D3B6L2 as seed ortholog is 100%.

Group of orthologs #1337. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 P.pallidum:168

F7BI62              	100.00%		D3B9E9              	100.00%
Bootstrap support for F7BI62 as seed ortholog is 100%.
Bootstrap support for D3B9E9 as seed ortholog is 100%.

Group of orthologs #1338. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 P.pallidum:167

F6QSH0              	100.00%		D3BE66              	100.00%
Bootstrap support for F6QSH0 as seed ortholog is 100%.
Bootstrap support for D3BE66 as seed ortholog is 100%.

Group of orthologs #1339. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 P.pallidum:167

F6ZQX9              	100.00%		D3B5J6              	100.00%
Bootstrap support for F6ZQX9 as seed ortholog is 100%.
Bootstrap support for D3B5J6 as seed ortholog is 100%.

Group of orthologs #1340. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.pallidum:118

H2XTW5              	100.00%		D3BCF6              	100.00%
Bootstrap support for H2XTW5 as seed ortholog is 98%.
Bootstrap support for D3BCF6 as seed ortholog is 99%.

Group of orthologs #1341. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 P.pallidum:167

Q3MQ22              	100.00%		D3B8P8              	100.00%
Bootstrap support for Q3MQ22 as seed ortholog is 100%.
Bootstrap support for D3B8P8 as seed ortholog is 100%.

Group of orthologs #1342. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 P.pallidum:167

F7BB49              	100.00%		D3BU92              	100.00%
Bootstrap support for F7BB49 as seed ortholog is 100%.
Bootstrap support for D3BU92 as seed ortholog is 100%.

Group of orthologs #1343. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.pallidum:167

H2XPM9              	100.00%		D3BNY3              	100.00%
Bootstrap support for H2XPM9 as seed ortholog is 99%.
Bootstrap support for D3BNY3 as seed ortholog is 100%.

Group of orthologs #1344. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.pallidum:166

F6Q3L6              	100.00%		D3B1C2              	100.00%
Bootstrap support for F6Q3L6 as seed ortholog is 100%.
Bootstrap support for D3B1C2 as seed ortholog is 100%.

Group of orthologs #1345. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.pallidum:166

F6Y2U7              	100.00%		D3B509              	100.00%
Bootstrap support for F6Y2U7 as seed ortholog is 100%.
Bootstrap support for D3B509 as seed ortholog is 100%.

Group of orthologs #1346. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.pallidum:166

F6ZEU6              	100.00%		D3B279              	100.00%
Bootstrap support for F6ZEU6 as seed ortholog is 100%.
Bootstrap support for D3B279 as seed ortholog is 100%.

Group of orthologs #1347. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 P.pallidum:166

F6V2A4              	100.00%		D3BPV0              	100.00%
Bootstrap support for F6V2A4 as seed ortholog is 47%.
Alternative seed ortholog is F7BHG2 (2 bits away from this cluster)
Bootstrap support for D3BPV0 as seed ortholog is 100%.

Group of orthologs #1348. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.pallidum:166

F6UNT7              	100.00%		D3BSK1              	100.00%
Bootstrap support for F6UNT7 as seed ortholog is 100%.
Bootstrap support for D3BSK1 as seed ortholog is 100%.

Group of orthologs #1349. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.pallidum:166

F7BHN6              	100.00%		D3BE09              	100.00%
Bootstrap support for F7BHN6 as seed ortholog is 100%.
Bootstrap support for D3BE09 as seed ortholog is 100%.

Group of orthologs #1350. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 P.pallidum:166

F7B5A5              	100.00%		D3BUL6              	100.00%
Bootstrap support for F7B5A5 as seed ortholog is 100%.
Bootstrap support for D3BUL6 as seed ortholog is 100%.

Group of orthologs #1351. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.pallidum:165

F6WVH9              	100.00%		D3BHC6              	100.00%
F6V5Y1              	13.26%		
F6YW02              	9.67%		
F6QJ74              	8.42%		
Bootstrap support for F6WVH9 as seed ortholog is 100%.
Bootstrap support for D3BHC6 as seed ortholog is 100%.

Group of orthologs #1352. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.pallidum:165

H2XQI0              	100.00%		D3B8R1              	100.00%
F7AD70              	31.44%		
Bootstrap support for H2XQI0 as seed ortholog is 91%.
Bootstrap support for D3B8R1 as seed ortholog is 100%.

Group of orthologs #1353. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.pallidum:165

F6R012              	100.00%		D3AVQ0              	100.00%
Bootstrap support for F6R012 as seed ortholog is 100%.
Bootstrap support for D3AVQ0 as seed ortholog is 100%.

Group of orthologs #1354. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.pallidum:165

F6WWT1              	100.00%		D3AVU9              	100.00%
Bootstrap support for F6WWT1 as seed ortholog is 100%.
Bootstrap support for D3AVU9 as seed ortholog is 100%.

Group of orthologs #1355. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.pallidum:165

F6RMT1              	100.00%		D3BDH2              	100.00%
Bootstrap support for F6RMT1 as seed ortholog is 100%.
Bootstrap support for D3BDH2 as seed ortholog is 100%.

Group of orthologs #1356. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:165

F6QIH1              	100.00%		D3BRK2              	100.00%
Bootstrap support for F6QIH1 as seed ortholog is 95%.
Bootstrap support for D3BRK2 as seed ortholog is 100%.

Group of orthologs #1357. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.pallidum:165

F6VKC0              	100.00%		D3BQV3              	100.00%
Bootstrap support for F6VKC0 as seed ortholog is 100%.
Bootstrap support for D3BQV3 as seed ortholog is 100%.

Group of orthologs #1358. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 P.pallidum:165

F6W6Z3              	100.00%		D3BVL7              	100.00%
Bootstrap support for F6W6Z3 as seed ortholog is 100%.
Bootstrap support for D3BVL7 as seed ortholog is 100%.

Group of orthologs #1359. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 P.pallidum:164

F6V828              	100.00%		D3B9K4              	100.00%
F7A2K6              	19.67%		D3B9J7              	37.70%
Bootstrap support for F6V828 as seed ortholog is 100%.
Bootstrap support for D3B9K4 as seed ortholog is 100%.

Group of orthologs #1360. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 P.pallidum:164

F6WTU8              	100.00%		D3AW88              	100.00%
Bootstrap support for F6WTU8 as seed ortholog is 100%.
Bootstrap support for D3AW88 as seed ortholog is 100%.

Group of orthologs #1361. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 P.pallidum:164

F6V1A9              	100.00%		D3B1F7              	100.00%
Bootstrap support for F6V1A9 as seed ortholog is 100%.
Bootstrap support for D3B1F7 as seed ortholog is 100%.

Group of orthologs #1362. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 P.pallidum:164

F6RPW8              	100.00%		D3BPS7              	100.00%
Bootstrap support for F6RPW8 as seed ortholog is 100%.
Bootstrap support for D3BPS7 as seed ortholog is 100%.

Group of orthologs #1363. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 P.pallidum:164

F7B2L3              	100.00%		D3B437              	100.00%
Bootstrap support for F7B2L3 as seed ortholog is 100%.
Bootstrap support for D3B437 as seed ortholog is 100%.

Group of orthologs #1364. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 P.pallidum:53

H2XVE0              	100.00%		D3BI29              	100.00%
Bootstrap support for H2XVE0 as seed ortholog is 88%.
Bootstrap support for D3BI29 as seed ortholog is 98%.

Group of orthologs #1365. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 P.pallidum:163

F6WBG2              	100.00%		D3AVH6              	100.00%
H2XRM1              	27.49%		D3B879              	23.28%
Bootstrap support for F6WBG2 as seed ortholog is 78%.
Bootstrap support for D3AVH6 as seed ortholog is 100%.

Group of orthologs #1366. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.pallidum:107

F6W350              	100.00%		D3AVX7              	100.00%
Bootstrap support for F6W350 as seed ortholog is 100%.
Bootstrap support for D3AVX7 as seed ortholog is 99%.

Group of orthologs #1367. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.pallidum:163

F6S0S0              	100.00%		D3BHF9              	100.00%
Bootstrap support for F6S0S0 as seed ortholog is 100%.
Bootstrap support for D3BHF9 as seed ortholog is 100%.

Group of orthologs #1368. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.pallidum:163

F7AUY7              	100.00%		D3B2Q4              	100.00%
Bootstrap support for F7AUY7 as seed ortholog is 100%.
Bootstrap support for D3B2Q4 as seed ortholog is 100%.

Group of orthologs #1369. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.pallidum:163

F6V4L6              	100.00%		D3BNV6              	100.00%
Bootstrap support for F6V4L6 as seed ortholog is 100%.
Bootstrap support for D3BNV6 as seed ortholog is 100%.

Group of orthologs #1370. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.pallidum:163

H2XLD1              	100.00%		D3B7I6              	100.00%
Bootstrap support for H2XLD1 as seed ortholog is 100%.
Bootstrap support for D3B7I6 as seed ortholog is 100%.

Group of orthologs #1371. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 P.pallidum:163

F7ASI0              	100.00%		D3BPH9              	100.00%
Bootstrap support for F7ASI0 as seed ortholog is 100%.
Bootstrap support for D3BPH9 as seed ortholog is 100%.

Group of orthologs #1372. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.pallidum:118

F7AWQ7              	100.00%		D3BR38              	100.00%
Bootstrap support for F7AWQ7 as seed ortholog is 88%.
Bootstrap support for D3BR38 as seed ortholog is 99%.

Group of orthologs #1373. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.pallidum:162

F6WZA5              	100.00%		D3AXZ7              	100.00%
Bootstrap support for F6WZA5 as seed ortholog is 100%.
Bootstrap support for D3AXZ7 as seed ortholog is 100%.

Group of orthologs #1374. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.pallidum:162

F6SDU1              	100.00%		D3BHP3              	100.00%
Bootstrap support for F6SDU1 as seed ortholog is 100%.
Bootstrap support for D3BHP3 as seed ortholog is 100%.

Group of orthologs #1375. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 P.pallidum:162

F7BP62              	100.00%		D3B2Y5              	100.00%
Bootstrap support for F7BP62 as seed ortholog is 100%.
Bootstrap support for D3B2Y5 as seed ortholog is 100%.

Group of orthologs #1376. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.pallidum:46

F6PN33              	100.00%		D3BQC1              	100.00%
F6Z4V3              	19.84%		D3BI36              	13.58%
F6SGK0              	6.93%		D3B9V6              	8.71%
                    	       		D3BUS9              	8.20%
                    	       		D3BFV7              	6.32%
Bootstrap support for F6PN33 as seed ortholog is 100%.
Bootstrap support for D3BQC1 as seed ortholog is 86%.

Group of orthologs #1377. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.pallidum:161

F7AG43              	100.00%		D3AZD5              	100.00%
Bootstrap support for F7AG43 as seed ortholog is 100%.
Bootstrap support for D3AZD5 as seed ortholog is 100%.

Group of orthologs #1378. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.pallidum:161

F6X0F3              	100.00%		D3BDZ0              	100.00%
Bootstrap support for F6X0F3 as seed ortholog is 100%.
Bootstrap support for D3BDZ0 as seed ortholog is 100%.

Group of orthologs #1379. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.pallidum:88

F7ART8              	100.00%		D3B5N8              	100.00%
Bootstrap support for F7ART8 as seed ortholog is 99%.
Bootstrap support for D3B5N8 as seed ortholog is 98%.

Group of orthologs #1380. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 P.pallidum:161

F6XKZ0              	100.00%		D3BIN1              	100.00%
Bootstrap support for F6XKZ0 as seed ortholog is 100%.
Bootstrap support for D3BIN1 as seed ortholog is 100%.

Group of orthologs #1381. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.pallidum:53

F6UUI1              	100.00%		D3BU73              	100.00%
Bootstrap support for F6UUI1 as seed ortholog is 99%.
Bootstrap support for D3BU73 as seed ortholog is 99%.

Group of orthologs #1382. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 P.pallidum:160

F7BD35              	100.00%		D3BUI9              	100.00%
                    	       		D3BCF4              	15.86%
Bootstrap support for F7BD35 as seed ortholog is 83%.
Bootstrap support for D3BUI9 as seed ortholog is 100%.

Group of orthologs #1383. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.pallidum:160

F6QWU8              	100.00%		D3B6T6              	100.00%
Bootstrap support for F6QWU8 as seed ortholog is 100%.
Bootstrap support for D3B6T6 as seed ortholog is 100%.

Group of orthologs #1384. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.pallidum:160

F6Q4X5              	100.00%		D3BH46              	100.00%
Bootstrap support for F6Q4X5 as seed ortholog is 100%.
Bootstrap support for D3BH46 as seed ortholog is 100%.

Group of orthologs #1385. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.pallidum:52

F6U6F4              	100.00%		D3BB53              	100.00%
Bootstrap support for F6U6F4 as seed ortholog is 100%.
Bootstrap support for D3BB53 as seed ortholog is 86%.

Group of orthologs #1386. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.pallidum:160

F6XNG1              	100.00%		D3B8B2              	100.00%
Bootstrap support for F6XNG1 as seed ortholog is 100%.
Bootstrap support for D3B8B2 as seed ortholog is 100%.

Group of orthologs #1387. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.pallidum:45

F6R4Z1              	100.00%		D3BM90              	100.00%
Bootstrap support for F6R4Z1 as seed ortholog is 100%.
Bootstrap support for D3BM90 as seed ortholog is 91%.

Group of orthologs #1388. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.pallidum:160

F6SMS7              	100.00%		D3BU40              	100.00%
Bootstrap support for F6SMS7 as seed ortholog is 100%.
Bootstrap support for D3BU40 as seed ortholog is 100%.

Group of orthologs #1389. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.pallidum:160

F6Z0V4              	100.00%		D3BHU6              	100.00%
Bootstrap support for F6Z0V4 as seed ortholog is 100%.
Bootstrap support for D3BHU6 as seed ortholog is 100%.

Group of orthologs #1390. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.pallidum:160

H2Y0A0              	100.00%		D3AVW2              	100.00%
Bootstrap support for H2Y0A0 as seed ortholog is 96%.
Bootstrap support for D3AVW2 as seed ortholog is 100%.

Group of orthologs #1391. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 P.pallidum:160

H2XKF1              	100.00%		D3BIR5              	100.00%
Bootstrap support for H2XKF1 as seed ortholog is 100%.
Bootstrap support for D3BIR5 as seed ortholog is 100%.

Group of orthologs #1392. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 P.pallidum:91

H2Y2K5              	100.00%		D3B5A5              	100.00%
F6VXL3              	45.87%		
Bootstrap support for H2Y2K5 as seed ortholog is 100%.
Bootstrap support for D3B5A5 as seed ortholog is 99%.

Group of orthologs #1393. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 P.pallidum:159

F6T120              	100.00%		D3B873              	100.00%
Bootstrap support for F6T120 as seed ortholog is 100%.
Bootstrap support for D3B873 as seed ortholog is 100%.

Group of orthologs #1394. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 P.pallidum:159

F6WPS3              	100.00%		D3BAK2              	100.00%
Bootstrap support for F6WPS3 as seed ortholog is 100%.
Bootstrap support for D3BAK2 as seed ortholog is 100%.

Group of orthologs #1395. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 P.pallidum:159

F6WX23              	100.00%		D3BJY8              	100.00%
Bootstrap support for F6WX23 as seed ortholog is 100%.
Bootstrap support for D3BJY8 as seed ortholog is 100%.

Group of orthologs #1396. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 P.pallidum:86

F6YXT8              	100.00%		D3BTE5              	100.00%
Bootstrap support for F6YXT8 as seed ortholog is 100%.
Bootstrap support for D3BTE5 as seed ortholog is 98%.

Group of orthologs #1397. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 P.pallidum:159

H2XU65              	100.00%		D3BQC9              	100.00%
Bootstrap support for H2XU65 as seed ortholog is 100%.
Bootstrap support for D3BQC9 as seed ortholog is 100%.

Group of orthologs #1398. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.pallidum:158

F6RTY1              	100.00%		D3B5M3              	100.00%
Bootstrap support for F6RTY1 as seed ortholog is 100%.
Bootstrap support for D3B5M3 as seed ortholog is 100%.

Group of orthologs #1399. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.pallidum:158

F6T485              	100.00%		D3BHT1              	100.00%
Bootstrap support for F6T485 as seed ortholog is 100%.
Bootstrap support for D3BHT1 as seed ortholog is 100%.

Group of orthologs #1400. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.pallidum:158

F6R407              	100.00%		D3BLV0              	100.00%
Bootstrap support for F6R407 as seed ortholog is 100%.
Bootstrap support for D3BLV0 as seed ortholog is 100%.

Group of orthologs #1401. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.pallidum:158

F6XQ02              	100.00%		D3BK97              	100.00%
Bootstrap support for F6XQ02 as seed ortholog is 85%.
Bootstrap support for D3BK97 as seed ortholog is 100%.

Group of orthologs #1402. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.pallidum:158

F6X1E1              	100.00%		D3BNV1              	100.00%
Bootstrap support for F6X1E1 as seed ortholog is 100%.
Bootstrap support for D3BNV1 as seed ortholog is 100%.

Group of orthologs #1403. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.pallidum:158

H2XYS7              	100.00%		D3B1L2              	100.00%
Bootstrap support for H2XYS7 as seed ortholog is 100%.
Bootstrap support for D3B1L2 as seed ortholog is 100%.

Group of orthologs #1404. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.pallidum:158

F6YG81              	100.00%		D3BQF7              	100.00%
Bootstrap support for F6YG81 as seed ortholog is 100%.
Bootstrap support for D3BQF7 as seed ortholog is 100%.

Group of orthologs #1405. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.pallidum:158

H2Y0I5              	100.00%		D3B2Q7              	100.00%
Bootstrap support for H2Y0I5 as seed ortholog is 100%.
Bootstrap support for D3B2Q7 as seed ortholog is 100%.

Group of orthologs #1406. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 P.pallidum:158

H2Y1Y8              	100.00%		D3BMX5              	100.00%
Bootstrap support for H2Y1Y8 as seed ortholog is 100%.
Bootstrap support for D3BMX5 as seed ortholog is 100%.

Group of orthologs #1407. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 P.pallidum:157

H2XTJ5              	100.00%		D3B5G1              	100.00%
                    	       		D3BB79              	26.62%
Bootstrap support for H2XTJ5 as seed ortholog is 100%.
Bootstrap support for D3B5G1 as seed ortholog is 100%.

Group of orthologs #1408. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 P.pallidum:157

F6Z998              	100.00%		D3BIR0              	100.00%
Bootstrap support for F6Z998 as seed ortholog is 100%.
Bootstrap support for D3BIR0 as seed ortholog is 100%.

Group of orthologs #1409. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 P.pallidum:18

F6WH54              	100.00%		D3B9Q5              	100.00%
F6RMF5              	54.37%		D3B9Q6              	38.51%
H2XP37              	47.62%		D3BE24              	18.20%
F6TXB9              	29.50%		
F6XP43              	29.00%		
F6PIA1              	14.50%		
F6WYA1              	11.25%		
F6QTW3              	8.38%		
Bootstrap support for F6WH54 as seed ortholog is 71%.
Alternative seed ortholog is F6RZA6 (20 bits away from this cluster)
Bootstrap support for D3B9Q5 as seed ortholog is 72%.
Alternative seed ortholog is D3B3V6 (18 bits away from this cluster)

Group of orthologs #1410. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.pallidum:156

F6RED0              	100.00%		D3AWR4              	100.00%
Bootstrap support for F6RED0 as seed ortholog is 100%.
Bootstrap support for D3AWR4 as seed ortholog is 100%.

Group of orthologs #1411. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.pallidum:156

F6S2C6              	100.00%		D3B4P6              	100.00%
Bootstrap support for F6S2C6 as seed ortholog is 100%.
Bootstrap support for D3B4P6 as seed ortholog is 100%.

Group of orthologs #1412. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.pallidum:156

F6XZ31              	100.00%		D3BAF0              	100.00%
Bootstrap support for F6XZ31 as seed ortholog is 100%.
Bootstrap support for D3BAF0 as seed ortholog is 100%.

Group of orthologs #1413. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.pallidum:156

F6U3F2              	100.00%		D3BTS9              	100.00%
Bootstrap support for F6U3F2 as seed ortholog is 100%.
Bootstrap support for D3BTS9 as seed ortholog is 100%.

Group of orthologs #1414. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.pallidum:156

F6WNH2              	100.00%		D3BTM7              	100.00%
Bootstrap support for F6WNH2 as seed ortholog is 100%.
Bootstrap support for D3BTM7 as seed ortholog is 100%.

Group of orthologs #1415. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 P.pallidum:156

H2Y3N6              	100.00%		D3B0Z7              	100.00%
Bootstrap support for H2Y3N6 as seed ortholog is 100%.
Bootstrap support for D3B0Z7 as seed ortholog is 100%.

Group of orthologs #1416. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.pallidum:155

F6SS76              	100.00%		D3BEK8              	100.00%
Bootstrap support for F6SS76 as seed ortholog is 100%.
Bootstrap support for D3BEK8 as seed ortholog is 100%.

Group of orthologs #1417. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 P.pallidum:32

F6V304              	100.00%		D3BAI5              	100.00%
Bootstrap support for F6V304 as seed ortholog is 71%.
Alternative seed ortholog is F6YWK0 (13 bits away from this cluster)
Bootstrap support for D3BAI5 as seed ortholog is 87%.

Group of orthologs #1418. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.pallidum:155

F6RQ34              	100.00%		D3BIP8              	100.00%
Bootstrap support for F6RQ34 as seed ortholog is 100%.
Bootstrap support for D3BIP8 as seed ortholog is 100%.

Group of orthologs #1419. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 P.pallidum:155

F7AER5              	100.00%		D3BCQ8              	100.00%
Bootstrap support for F7AER5 as seed ortholog is 100%.
Bootstrap support for D3BCQ8 as seed ortholog is 100%.

Group of orthologs #1420. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 P.pallidum:69

F6TXM9              	100.00%		D3BAP8              	100.00%
Bootstrap support for F6TXM9 as seed ortholog is 78%.
Bootstrap support for D3BAP8 as seed ortholog is 98%.

Group of orthologs #1421. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.pallidum:70

F6W841              	100.00%		D3BVR3              	100.00%
Bootstrap support for F6W841 as seed ortholog is 99%.
Bootstrap support for D3BVR3 as seed ortholog is 99%.

Group of orthologs #1422. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 P.pallidum:73

H2Y3L9              	100.00%		D3BJB1              	100.00%
Bootstrap support for H2Y3L9 as seed ortholog is 100%.
Bootstrap support for D3BJB1 as seed ortholog is 99%.

Group of orthologs #1423. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 P.pallidum:154

H2Y3J4              	100.00%		D3BQ09              	100.00%
Bootstrap support for H2Y3J4 as seed ortholog is 100%.
Bootstrap support for D3BQ09 as seed ortholog is 100%.

Group of orthologs #1424. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.pallidum:153

F6UQM6              	100.00%		D3AWH5              	100.00%
Bootstrap support for F6UQM6 as seed ortholog is 100%.
Bootstrap support for D3AWH5 as seed ortholog is 100%.

Group of orthologs #1425. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.pallidum:153

F6W248              	100.00%		D3BAR1              	100.00%
Bootstrap support for F6W248 as seed ortholog is 100%.
Bootstrap support for D3BAR1 as seed ortholog is 100%.

Group of orthologs #1426. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.pallidum:153

F6Z768              	100.00%		D3B445              	100.00%
Bootstrap support for F6Z768 as seed ortholog is 100%.
Bootstrap support for D3B445 as seed ortholog is 100%.

Group of orthologs #1427. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:153

H2XQC1              	100.00%		D3B0G4              	100.00%
Bootstrap support for H2XQC1 as seed ortholog is 98%.
Bootstrap support for D3B0G4 as seed ortholog is 100%.

Group of orthologs #1428. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.pallidum:153

H2XLH8              	100.00%		D3B5D4              	100.00%
Bootstrap support for H2XLH8 as seed ortholog is 100%.
Bootstrap support for D3B5D4 as seed ortholog is 100%.

Group of orthologs #1429. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.pallidum:42

F6ZTS6              	100.00%		D3BGC8              	100.00%
Bootstrap support for F6ZTS6 as seed ortholog is 92%.
Bootstrap support for D3BGC8 as seed ortholog is 78%.

Group of orthologs #1430. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.pallidum:153

F7AD34              	100.00%		D3BH33              	100.00%
Bootstrap support for F7AD34 as seed ortholog is 100%.
Bootstrap support for D3BH33 as seed ortholog is 100%.

Group of orthologs #1431. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 P.pallidum:153

F6YVQ9              	100.00%		D3BNW3              	100.00%
Bootstrap support for F6YVQ9 as seed ortholog is 100%.
Bootstrap support for D3BNW3 as seed ortholog is 100%.

Group of orthologs #1432. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 P.pallidum:152

F6YB21              	100.00%		D3B7U1              	100.00%
Bootstrap support for F6YB21 as seed ortholog is 100%.
Bootstrap support for D3B7U1 as seed ortholog is 100%.

Group of orthologs #1433. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 P.pallidum:152

F6YGG6              	100.00%		D3BFX3              	100.00%
Bootstrap support for F6YGG6 as seed ortholog is 100%.
Bootstrap support for D3BFX3 as seed ortholog is 100%.

Group of orthologs #1434. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 P.pallidum:152

H2XVQ2              	100.00%		D3BF10              	100.00%
Bootstrap support for H2XVQ2 as seed ortholog is 100%.
Bootstrap support for D3BF10 as seed ortholog is 100%.

Group of orthologs #1435. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.pallidum:151

F6YCJ4              	100.00%		D3B7E2              	100.00%
F6YGS0              	100.00%		
F7AFI4              	100.00%		
Bootstrap support for F6YCJ4 as seed ortholog is 96%.
Bootstrap support for F6YGS0 as seed ortholog is 96%.
Bootstrap support for F7AFI4 as seed ortholog is 97%.
Bootstrap support for D3B7E2 as seed ortholog is 100%.

Group of orthologs #1436. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.pallidum:19

F7AJ78              	100.00%		D3BQM5              	100.00%
F6XEV8              	15.13%		
Bootstrap support for F7AJ78 as seed ortholog is 97%.
Bootstrap support for D3BQM5 as seed ortholog is 63%.
Alternative seed ortholog is D3BGV8 (19 bits away from this cluster)

Group of orthologs #1437. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.pallidum:151

F6TCG6              	100.00%		D3AXG8              	100.00%
Bootstrap support for F6TCG6 as seed ortholog is 100%.
Bootstrap support for D3AXG8 as seed ortholog is 100%.

Group of orthologs #1438. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.pallidum:151

F6UK15              	100.00%		D3AX80              	100.00%
Bootstrap support for F6UK15 as seed ortholog is 100%.
Bootstrap support for D3AX80 as seed ortholog is 100%.

Group of orthologs #1439. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.pallidum:151

F6SVN8              	100.00%		D3BB09              	100.00%
Bootstrap support for F6SVN8 as seed ortholog is 100%.
Bootstrap support for D3BB09 as seed ortholog is 100%.

Group of orthologs #1440. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.pallidum:151

H2XNV9              	100.00%		D3BJ18              	100.00%
Bootstrap support for H2XNV9 as seed ortholog is 100%.
Bootstrap support for D3BJ18 as seed ortholog is 100%.

Group of orthologs #1441. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 P.pallidum:151

F7A9M5              	100.00%		D3BSY9              	100.00%
Bootstrap support for F7A9M5 as seed ortholog is 100%.
Bootstrap support for D3BSY9 as seed ortholog is 100%.

Group of orthologs #1442. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:98

H2XZE5              	100.00%		D3BS21              	100.00%
Bootstrap support for H2XZE5 as seed ortholog is 87%.
Bootstrap support for D3BS21 as seed ortholog is 97%.

Group of orthologs #1443. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 P.pallidum:150

F6Z235              	100.00%		D3AVM9              	100.00%
Bootstrap support for F6Z235 as seed ortholog is 100%.
Bootstrap support for D3AVM9 as seed ortholog is 100%.

Group of orthologs #1444. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 P.pallidum:150

F6SRF9              	100.00%		D3BLG3              	100.00%
Bootstrap support for F6SRF9 as seed ortholog is 92%.
Bootstrap support for D3BLG3 as seed ortholog is 100%.

Group of orthologs #1445. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 P.pallidum:150

F6XJ18              	100.00%		D3BL09              	100.00%
Bootstrap support for F6XJ18 as seed ortholog is 100%.
Bootstrap support for D3BL09 as seed ortholog is 100%.

Group of orthologs #1446. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.pallidum:149

F6WWH2              	100.00%		D3B195              	100.00%
Bootstrap support for F6WWH2 as seed ortholog is 100%.
Bootstrap support for D3B195 as seed ortholog is 100%.

Group of orthologs #1447. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.pallidum:149

F6YAD0              	100.00%		D3B2P5              	100.00%
Bootstrap support for F6YAD0 as seed ortholog is 100%.
Bootstrap support for D3B2P5 as seed ortholog is 100%.

Group of orthologs #1448. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.pallidum:149

F6Z8U5              	100.00%		D3B432              	100.00%
Bootstrap support for F6Z8U5 as seed ortholog is 100%.
Bootstrap support for D3B432 as seed ortholog is 100%.

Group of orthologs #1449. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.pallidum:149

F6ZCI6              	100.00%		D3BK56              	100.00%
Bootstrap support for F6ZCI6 as seed ortholog is 100%.
Bootstrap support for D3BK56 as seed ortholog is 100%.

Group of orthologs #1450. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 P.pallidum:149

H2XY03              	100.00%		D3BSP0              	100.00%
Bootstrap support for H2XY03 as seed ortholog is 100%.
Bootstrap support for D3BSP0 as seed ortholog is 100%.

Group of orthologs #1451. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.pallidum:148

H2Y142              	100.00%		D3BC40              	100.00%
H2XX23              	95.20%		
Bootstrap support for H2Y142 as seed ortholog is 100%.
Bootstrap support for D3BC40 as seed ortholog is 100%.

Group of orthologs #1452. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.pallidum:148

F6SXF0              	100.00%		D3AVK3              	100.00%
Bootstrap support for F6SXF0 as seed ortholog is 100%.
Bootstrap support for D3AVK3 as seed ortholog is 100%.

Group of orthologs #1453. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.pallidum:49

F6RYV9              	100.00%		D3B436              	100.00%
Bootstrap support for F6RYV9 as seed ortholog is 91%.
Bootstrap support for D3B436 as seed ortholog is 84%.

Group of orthologs #1454. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.pallidum:148

F6UG35              	100.00%		D3BHA2              	100.00%
Bootstrap support for F6UG35 as seed ortholog is 100%.
Bootstrap support for D3BHA2 as seed ortholog is 100%.

Group of orthologs #1455. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.pallidum:49

F7B4V3              	100.00%		D3B2T3              	100.00%
Bootstrap support for F7B4V3 as seed ortholog is 100%.
Bootstrap support for D3B2T3 as seed ortholog is 93%.

Group of orthologs #1456. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.pallidum:148

F6SVI8              	100.00%		D3BM97              	100.00%
Bootstrap support for F6SVI8 as seed ortholog is 94%.
Bootstrap support for D3BM97 as seed ortholog is 100%.

Group of orthologs #1457. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.pallidum:148

F6YP38              	100.00%		D3BGM9              	100.00%
Bootstrap support for F6YP38 as seed ortholog is 100%.
Bootstrap support for D3BGM9 as seed ortholog is 100%.

Group of orthologs #1458. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.pallidum:148

F7BKA5              	100.00%		D3BAS2              	100.00%
Bootstrap support for F7BKA5 as seed ortholog is 100%.
Bootstrap support for D3BAS2 as seed ortholog is 100%.

Group of orthologs #1459. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 P.pallidum:148

H2XSF2              	100.00%		D3B2U3              	100.00%
Bootstrap support for H2XSF2 as seed ortholog is 100%.
Bootstrap support for D3B2U3 as seed ortholog is 100%.

Group of orthologs #1460. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.pallidum:148

F6YF45              	100.00%		D3BT12              	100.00%
Bootstrap support for F6YF45 as seed ortholog is 100%.
Bootstrap support for D3BT12 as seed ortholog is 100%.

Group of orthologs #1461. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.pallidum:73

F7ASZ2              	100.00%		D3BHH6              	100.00%
Bootstrap support for F7ASZ2 as seed ortholog is 99%.
Bootstrap support for D3BHH6 as seed ortholog is 99%.

Group of orthologs #1462. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.pallidum:146

H2XLN0              	100.00%		D3BV18              	100.00%
F6VM60              	13.26%		
Bootstrap support for H2XLN0 as seed ortholog is 100%.
Bootstrap support for D3BV18 as seed ortholog is 100%.

Group of orthologs #1463. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.pallidum:146

F6PPH5              	100.00%		D3B7E1              	100.00%
Bootstrap support for F6PPH5 as seed ortholog is 98%.
Bootstrap support for D3B7E1 as seed ortholog is 100%.

Group of orthologs #1464. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.pallidum:146

F6T385              	100.00%		D3BBT7              	100.00%
Bootstrap support for F6T385 as seed ortholog is 100%.
Bootstrap support for D3BBT7 as seed ortholog is 100%.

Group of orthologs #1465. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.pallidum:33

F6VD75              	100.00%		D3BHM0              	100.00%
Bootstrap support for F6VD75 as seed ortholog is 100%.
Bootstrap support for D3BHM0 as seed ortholog is 82%.

Group of orthologs #1466. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.pallidum:146

H2XJL7              	100.00%		D3B3G5              	100.00%
Bootstrap support for H2XJL7 as seed ortholog is 100%.
Bootstrap support for D3B3G5 as seed ortholog is 100%.

Group of orthologs #1467. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 P.pallidum:146

F6WPV3              	100.00%		D3BJM0              	100.00%
Bootstrap support for F6WPV3 as seed ortholog is 61%.
Alternative seed ortholog is F6UGF1 (6 bits away from this cluster)
Bootstrap support for D3BJM0 as seed ortholog is 100%.

Group of orthologs #1468. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.pallidum:146

H2XRS4              	100.00%		D3B2C2              	100.00%
Bootstrap support for H2XRS4 as seed ortholog is 100%.
Bootstrap support for D3B2C2 as seed ortholog is 100%.

Group of orthologs #1469. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.pallidum:146

F6ZT62              	100.00%		D3BH56              	100.00%
Bootstrap support for F6ZT62 as seed ortholog is 100%.
Bootstrap support for D3BH56 as seed ortholog is 100%.

Group of orthologs #1470. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.pallidum:72

F7AH68              	100.00%		D3BPF6              	100.00%
Bootstrap support for F7AH68 as seed ortholog is 99%.
Bootstrap support for D3BPF6 as seed ortholog is 99%.

Group of orthologs #1471. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 P.pallidum:146

H2XRI7              	100.00%		D3BUZ6              	100.00%
Bootstrap support for H2XRI7 as seed ortholog is 100%.
Bootstrap support for D3BUZ6 as seed ortholog is 100%.

Group of orthologs #1472. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 P.pallidum:145

F6R4H7              	100.00%		D3B912              	100.00%
Bootstrap support for F6R4H7 as seed ortholog is 100%.
Bootstrap support for D3B912 as seed ortholog is 100%.

Group of orthologs #1473. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 P.pallidum:145

F6VYC6              	100.00%		D3BAK8              	100.00%
Bootstrap support for F6VYC6 as seed ortholog is 100%.
Bootstrap support for D3BAK8 as seed ortholog is 100%.

Group of orthologs #1474. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 P.pallidum:145

F6Y1Z7              	100.00%		D3B759              	100.00%
Bootstrap support for F6Y1Z7 as seed ortholog is 100%.
Bootstrap support for D3B759 as seed ortholog is 100%.

Group of orthologs #1475. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 P.pallidum:145

F6YIJ5              	100.00%		D3BAI0              	100.00%
Bootstrap support for F6YIJ5 as seed ortholog is 100%.
Bootstrap support for D3BAI0 as seed ortholog is 100%.

Group of orthologs #1476. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.pallidum:81

H2XMQ4              	100.00%		D3B7V5              	100.00%
Bootstrap support for H2XMQ4 as seed ortholog is 99%.
Bootstrap support for D3B7V5 as seed ortholog is 99%.

Group of orthologs #1477. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.pallidum:36

H2XLZ2              	100.00%		D3B9X0              	100.00%
Bootstrap support for H2XLZ2 as seed ortholog is 99%.
Bootstrap support for D3B9X0 as seed ortholog is 96%.

Group of orthologs #1478. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 P.pallidum:70

F7B0X0              	100.00%		D3BGB8              	100.00%
Bootstrap support for F7B0X0 as seed ortholog is 100%.
Bootstrap support for D3BGB8 as seed ortholog is 98%.

Group of orthologs #1479. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 P.pallidum:59

H2XK39              	100.00%		D3BVD2              	100.00%
Bootstrap support for H2XK39 as seed ortholog is 86%.
Bootstrap support for D3BVD2 as seed ortholog is 73%.
Alternative seed ortholog is D3B3D7 (59 bits away from this cluster)

Group of orthologs #1480. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.pallidum:144

F6Q909              	100.00%		D3B1Q9              	100.00%
Bootstrap support for F6Q909 as seed ortholog is 82%.
Bootstrap support for D3B1Q9 as seed ortholog is 100%.

Group of orthologs #1481. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.pallidum:144

F6U095              	100.00%		D3B9T4              	100.00%
Bootstrap support for F6U095 as seed ortholog is 100%.
Bootstrap support for D3B9T4 as seed ortholog is 100%.

Group of orthologs #1482. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.pallidum:144

F6X9U7              	100.00%		D3BNU2              	100.00%
Bootstrap support for F6X9U7 as seed ortholog is 100%.
Bootstrap support for D3BNU2 as seed ortholog is 100%.

Group of orthologs #1483. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.pallidum:144

F7B5G0              	100.00%		D3BFC3              	100.00%
Bootstrap support for F7B5G0 as seed ortholog is 100%.
Bootstrap support for D3BFC3 as seed ortholog is 100%.

Group of orthologs #1484. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 P.pallidum:144

H2XNI2              	100.00%		D3BIR6              	100.00%
Bootstrap support for H2XNI2 as seed ortholog is 100%.
Bootstrap support for D3BIR6 as seed ortholog is 100%.

Group of orthologs #1485. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 P.pallidum:60

Q86SD3              	100.00%		D3BBP7              	100.00%
Bootstrap support for Q86SD3 as seed ortholog is 54%.
Alternative seed ortholog is F6WTM4 (13 bits away from this cluster)
Bootstrap support for D3BBP7 as seed ortholog is 91%.

Group of orthologs #1486. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 P.pallidum:143

F6Z897              	100.00%		D3AZM6              	100.00%
Bootstrap support for F6Z897 as seed ortholog is 100%.
Bootstrap support for D3AZM6 as seed ortholog is 100%.

Group of orthologs #1487. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 P.pallidum:79

F6QAE6              	100.00%		D3BMW3              	100.00%
Bootstrap support for F6QAE6 as seed ortholog is 100%.
Bootstrap support for D3BMW3 as seed ortholog is 99%.

Group of orthologs #1488. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.pallidum:143

F7AUS4              	100.00%		D3BCK2              	100.00%
Bootstrap support for F7AUS4 as seed ortholog is 92%.
Bootstrap support for D3BCK2 as seed ortholog is 100%.

Group of orthologs #1489. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 P.pallidum:143

H2XUI3              	100.00%		D3B1K7              	100.00%
Bootstrap support for H2XUI3 as seed ortholog is 100%.
Bootstrap support for D3B1K7 as seed ortholog is 100%.

Group of orthologs #1490. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.pallidum:142

F6XEJ6              	100.00%		D3AZN4              	100.00%
Bootstrap support for F6XEJ6 as seed ortholog is 100%.
Bootstrap support for D3AZN4 as seed ortholog is 100%.

Group of orthologs #1491. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.pallidum:142

F6SAX8              	100.00%		D3BD80              	100.00%
Bootstrap support for F6SAX8 as seed ortholog is 100%.
Bootstrap support for D3BD80 as seed ortholog is 100%.

Group of orthologs #1492. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.pallidum:142

F6U3H2              	100.00%		D3BGW6              	100.00%
Bootstrap support for F6U3H2 as seed ortholog is 99%.
Bootstrap support for D3BGW6 as seed ortholog is 100%.

Group of orthologs #1493. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.pallidum:142

H2XJN2              	100.00%		D3AZH2              	100.00%
Bootstrap support for H2XJN2 as seed ortholog is 100%.
Bootstrap support for D3AZH2 as seed ortholog is 100%.

Group of orthologs #1494. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.pallidum:142

H2XM98              	100.00%		D3B500              	100.00%
Bootstrap support for H2XM98 as seed ortholog is 100%.
Bootstrap support for D3B500 as seed ortholog is 100%.

Group of orthologs #1495. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.pallidum:142

F7A4X2              	100.00%		D3BN51              	100.00%
Bootstrap support for F7A4X2 as seed ortholog is 100%.
Bootstrap support for D3BN51 as seed ortholog is 100%.

Group of orthologs #1496. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 P.pallidum:142

F7AX45              	100.00%		D3BTL0              	100.00%
Bootstrap support for F7AX45 as seed ortholog is 100%.
Bootstrap support for D3BTL0 as seed ortholog is 100%.

Group of orthologs #1497. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.pallidum:141

F6Z010              	100.00%		D3BNA9              	100.00%
                    	       		D3BTR9              	33.39%
                    	       		D3BF54              	25.12%
                    	       		D3BEV2              	17.63%
                    	       		D3BEV3              	13.26%
                    	       		D3BEV1              	7.33%
Bootstrap support for F6Z010 as seed ortholog is 94%.
Bootstrap support for D3BNA9 as seed ortholog is 100%.

Group of orthologs #1498. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 P.pallidum:141

F7AUM2              	100.00%		D3B4Y1              	100.00%
F6PTJ9              	13.58%		D3B1R8              	6.09%
Bootstrap support for F7AUM2 as seed ortholog is 60%.
Alternative seed ortholog is F6QHU2 (13 bits away from this cluster)
Bootstrap support for D3B4Y1 as seed ortholog is 100%.

Group of orthologs #1499. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.pallidum:141

F7AK04              	100.00%		D3BTY7              	100.00%
F6RQ16              	23.21%		
Bootstrap support for F7AK04 as seed ortholog is 100%.
Bootstrap support for D3BTY7 as seed ortholog is 100%.

Group of orthologs #1500. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.pallidum:141

P61802              	100.00%		D3BN22              	100.00%
F6TMD1              	97.94%		
Bootstrap support for P61802 as seed ortholog is 100%.
Bootstrap support for D3BN22 as seed ortholog is 100%.

Group of orthologs #1501. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.pallidum:141

F6VKK3              	100.00%		D3B660              	100.00%
Bootstrap support for F6VKK3 as seed ortholog is 100%.
Bootstrap support for D3B660 as seed ortholog is 100%.

Group of orthologs #1502. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.pallidum:141

F6TQZ3              	100.00%		D3BFT1              	100.00%
Bootstrap support for F6TQZ3 as seed ortholog is 100%.
Bootstrap support for D3BFT1 as seed ortholog is 100%.

Group of orthologs #1503. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.pallidum:141

F6Q484              	100.00%		D3BTV9              	100.00%
Bootstrap support for F6Q484 as seed ortholog is 100%.
Bootstrap support for D3BTV9 as seed ortholog is 100%.

Group of orthologs #1504. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.pallidum:141

H2XP92              	100.00%		D3AYD3              	100.00%
Bootstrap support for H2XP92 as seed ortholog is 100%.
Bootstrap support for D3AYD3 as seed ortholog is 100%.

Group of orthologs #1505. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 P.pallidum:141

Q4H3E2              	100.00%		D3BVL0              	100.00%
Bootstrap support for Q4H3E2 as seed ortholog is 100%.
Bootstrap support for D3BVL0 as seed ortholog is 100%.

Group of orthologs #1506. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.pallidum:139

F6Q8U3              	100.00%		D3AW71              	100.00%
Bootstrap support for F6Q8U3 as seed ortholog is 100%.
Bootstrap support for D3AW71 as seed ortholog is 100%.

Group of orthologs #1507. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.pallidum:139

F6XI97              	100.00%		D3B213              	100.00%
Bootstrap support for F6XI97 as seed ortholog is 100%.
Bootstrap support for D3B213 as seed ortholog is 100%.

Group of orthologs #1508. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.pallidum:91

F6ZLL7              	100.00%		D3BDC7              	100.00%
Bootstrap support for F6ZLL7 as seed ortholog is 100%.
Bootstrap support for D3BDC7 as seed ortholog is 99%.

Group of orthologs #1509. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.pallidum:139

F6UQX1              	100.00%		D3BV21              	100.00%
Bootstrap support for F6UQX1 as seed ortholog is 100%.
Bootstrap support for D3BV21 as seed ortholog is 100%.

Group of orthologs #1510. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.pallidum:139

H2XVJ2              	100.00%		D3B413              	100.00%
Bootstrap support for H2XVJ2 as seed ortholog is 100%.
Bootstrap support for D3B413 as seed ortholog is 100%.

Group of orthologs #1511. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 P.pallidum:139

H2Y2S5              	100.00%		D3BMK0              	100.00%
Bootstrap support for H2Y2S5 as seed ortholog is 100%.
Bootstrap support for D3BMK0 as seed ortholog is 100%.

Group of orthologs #1512. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.pallidum:59

F6X7P9              	100.00%		D3B903              	100.00%
                    	       		D3BFU0              	28.86%
Bootstrap support for F6X7P9 as seed ortholog is 100%.
Bootstrap support for D3B903 as seed ortholog is 77%.

Group of orthologs #1513. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.pallidum:138

A7BK23              	100.00%		D3B773              	100.00%
Bootstrap support for A7BK23 as seed ortholog is 100%.
Bootstrap support for D3B773 as seed ortholog is 100%.

Group of orthologs #1514. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.pallidum:138

F6Z7A9              	100.00%		D3AVZ9              	100.00%
Bootstrap support for F6Z7A9 as seed ortholog is 100%.
Bootstrap support for D3AVZ9 as seed ortholog is 100%.

Group of orthologs #1515. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.pallidum:138

F6PGW6              	100.00%		D3BKB2              	100.00%
Bootstrap support for F6PGW6 as seed ortholog is 100%.
Bootstrap support for D3BKB2 as seed ortholog is 100%.

Group of orthologs #1516. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.pallidum:138

F7ATN8              	100.00%		D3B1Q8              	100.00%
Bootstrap support for F7ATN8 as seed ortholog is 98%.
Bootstrap support for D3B1Q8 as seed ortholog is 100%.

Group of orthologs #1517. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.pallidum:138

F7AHQ4              	100.00%		D3B3N0              	100.00%
Bootstrap support for F7AHQ4 as seed ortholog is 100%.
Bootstrap support for D3B3N0 as seed ortholog is 100%.

Group of orthologs #1518. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.pallidum:138

F6U3C1              	100.00%		D3BU58              	100.00%
Bootstrap support for F6U3C1 as seed ortholog is 100%.
Bootstrap support for D3BU58 as seed ortholog is 100%.

Group of orthologs #1519. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.pallidum:138

H2XZL8              	100.00%		D3AWE0              	100.00%
Bootstrap support for H2XZL8 as seed ortholog is 100%.
Bootstrap support for D3AWE0 as seed ortholog is 100%.

Group of orthologs #1520. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.pallidum:7

F7AMD9              	100.00%		D3BF30              	100.00%
Bootstrap support for F7AMD9 as seed ortholog is 100%.
Bootstrap support for D3BF30 as seed ortholog is 61%.
Alternative seed ortholog is D3BJM3 (7 bits away from this cluster)

Group of orthologs #1521. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.pallidum:138

F6ZA98              	100.00%		D3BU88              	100.00%
Bootstrap support for F6ZA98 as seed ortholog is 100%.
Bootstrap support for D3BU88 as seed ortholog is 100%.

Group of orthologs #1522. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 P.pallidum:138

Q67EQ6              	100.00%		D3BKF7              	100.00%
Bootstrap support for Q67EQ6 as seed ortholog is 100%.
Bootstrap support for D3BKF7 as seed ortholog is 100%.

Group of orthologs #1523. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.pallidum:137

H2XNY0              	100.00%		D3BFR6              	100.00%
                    	       		D3BRT3              	11.87%
Bootstrap support for H2XNY0 as seed ortholog is 100%.
Bootstrap support for D3BFR6 as seed ortholog is 100%.

Group of orthologs #1524. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 P.pallidum:7

F6U472              	100.00%		D3BHG1              	100.00%
Bootstrap support for F6U472 as seed ortholog is 63%.
Alternative seed ortholog is F6PTH0 (10 bits away from this cluster)
Bootstrap support for D3BHG1 as seed ortholog is 60%.
Alternative seed ortholog is D3BPX8 (7 bits away from this cluster)

Group of orthologs #1525. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 P.pallidum:137

F6VFZ2              	100.00%		D3BMB1              	100.00%
Bootstrap support for F6VFZ2 as seed ortholog is 79%.
Bootstrap support for D3BMB1 as seed ortholog is 100%.

Group of orthologs #1526. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.pallidum:137

F6XMX2              	100.00%		D3BPJ7              	100.00%
Bootstrap support for F6XMX2 as seed ortholog is 100%.
Bootstrap support for D3BPJ7 as seed ortholog is 100%.

Group of orthologs #1527. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 P.pallidum:137

F7A429              	100.00%		D3BUD8              	100.00%
Bootstrap support for F7A429 as seed ortholog is 100%.
Bootstrap support for D3BUD8 as seed ortholog is 100%.

Group of orthologs #1528. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.pallidum:35

F6UVE4              	100.00%		D3BNQ4              	100.00%
F7B3V5              	100.00%		D3B457              	100.00%
H2XPJ1              	30.35%		D3BJJ6              	8.01%
F6S5X9              	26.49%		
F6W7J8              	20.53%		
H2Y356              	6.14%		
Bootstrap support for F6UVE4 as seed ortholog is 100%.
Bootstrap support for F7B3V5 as seed ortholog is 100%.
Bootstrap support for D3BNQ4 as seed ortholog is 86%.
Bootstrap support for D3B457 as seed ortholog is 66%.
Alternative seed ortholog is D3BGA8 (35 bits away from this cluster)

Group of orthologs #1529. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 P.pallidum:136

F6QW33              	100.00%		D3B7E6              	100.00%
                    	       		D3B3H3              	7.37%
Bootstrap support for F6QW33 as seed ortholog is 67%.
Alternative seed ortholog is F6Y8P2 (14 bits away from this cluster)
Bootstrap support for D3B7E6 as seed ortholog is 100%.

Group of orthologs #1530. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.pallidum:136

F6PHR7              	100.00%		D3B9G3              	100.00%
Bootstrap support for F6PHR7 as seed ortholog is 100%.
Bootstrap support for D3B9G3 as seed ortholog is 100%.

Group of orthologs #1531. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.pallidum:136

F6U1Z4              	100.00%		D3BAI7              	100.00%
Bootstrap support for F6U1Z4 as seed ortholog is 100%.
Bootstrap support for D3BAI7 as seed ortholog is 100%.

Group of orthologs #1532. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 P.pallidum:64

F6XJX5              	100.00%		D3B6S0              	100.00%
Bootstrap support for F6XJX5 as seed ortholog is 62%.
Alternative seed ortholog is F6XG01 (10 bits away from this cluster)
Bootstrap support for D3B6S0 as seed ortholog is 95%.

Group of orthologs #1533. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.pallidum:136

F6QM57              	100.00%		D3BT13              	100.00%
Bootstrap support for F6QM57 as seed ortholog is 100%.
Bootstrap support for D3BT13 as seed ortholog is 100%.

Group of orthologs #1534. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.pallidum:67

H2XWC1              	100.00%		D3AWD8              	100.00%
Bootstrap support for H2XWC1 as seed ortholog is 100%.
Bootstrap support for D3AWD8 as seed ortholog is 99%.

Group of orthologs #1535. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 P.pallidum:136

F7ALJ6              	100.00%		D3BBI0              	100.00%
Bootstrap support for F7ALJ6 as seed ortholog is 100%.
Bootstrap support for D3BBI0 as seed ortholog is 100%.

Group of orthologs #1536. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 P.pallidum:33

H2XJL6              	100.00%		D3BHM9              	100.00%
Bootstrap support for H2XJL6 as seed ortholog is 67%.
Alternative seed ortholog is F6VCR2 (17 bits away from this cluster)
Bootstrap support for D3BHM9 as seed ortholog is 82%.

Group of orthologs #1537. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:136

Q2PEE2              	100.00%		D3BKH9              	100.00%
Bootstrap support for Q2PEE2 as seed ortholog is 99%.
Bootstrap support for D3BKH9 as seed ortholog is 100%.

Group of orthologs #1538. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 P.pallidum:14

F6WW36              	100.00%		D3BAQ8              	100.00%
H2XRG7              	22.10%		
Bootstrap support for F6WW36 as seed ortholog is 57%.
Alternative seed ortholog is F6VCR2 (9 bits away from this cluster)
Bootstrap support for D3BAQ8 as seed ortholog is 66%.
Alternative seed ortholog is D3B4B8 (14 bits away from this cluster)

Group of orthologs #1539. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.pallidum:135

F6UTK0              	100.00%		D3B5S1              	100.00%
Bootstrap support for F6UTK0 as seed ortholog is 99%.
Bootstrap support for D3B5S1 as seed ortholog is 100%.

Group of orthologs #1540. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.pallidum:135

F6V934              	100.00%		D3BI20              	100.00%
Bootstrap support for F6V934 as seed ortholog is 100%.
Bootstrap support for D3BI20 as seed ortholog is 100%.

Group of orthologs #1541. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.pallidum:135

F6VA08              	100.00%		D3BKE4              	100.00%
Bootstrap support for F6VA08 as seed ortholog is 100%.
Bootstrap support for D3BKE4 as seed ortholog is 100%.

Group of orthologs #1542. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 P.pallidum:135

F6SNU1              	100.00%		D3BTW0              	100.00%
Bootstrap support for F6SNU1 as seed ortholog is 100%.
Bootstrap support for D3BTW0 as seed ortholog is 100%.

Group of orthologs #1543. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.pallidum:60

F6QHS0              	100.00%		D3AZJ0              	100.00%
Bootstrap support for F6QHS0 as seed ortholog is 100%.
Bootstrap support for D3AZJ0 as seed ortholog is 98%.

Group of orthologs #1544. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.pallidum:134

F6Z8R5              	100.00%		D3B0P6              	100.00%
Bootstrap support for F6Z8R5 as seed ortholog is 100%.
Bootstrap support for D3B0P6 as seed ortholog is 100%.

Group of orthologs #1545. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.pallidum:134

F6WCM9              	100.00%		D3BF47              	100.00%
Bootstrap support for F6WCM9 as seed ortholog is 100%.
Bootstrap support for D3BF47 as seed ortholog is 100%.

Group of orthologs #1546. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.pallidum:134

H2XSZ1              	100.00%		D3B044              	100.00%
Bootstrap support for H2XSZ1 as seed ortholog is 100%.
Bootstrap support for D3B044 as seed ortholog is 100%.

Group of orthologs #1547. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:134

F6Z7N3              	100.00%		D3BH37              	100.00%
Bootstrap support for F6Z7N3 as seed ortholog is 60%.
Alternative seed ortholog is F6TR45 (57 bits away from this cluster)
Bootstrap support for D3BH37 as seed ortholog is 100%.

Group of orthologs #1548. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.pallidum:134

F6Y7F7              	100.00%		D3BM06              	100.00%
Bootstrap support for F6Y7F7 as seed ortholog is 100%.
Bootstrap support for D3BM06 as seed ortholog is 100%.

Group of orthologs #1549. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.pallidum:134

F6V2B2              	100.00%		D3BUW4              	100.00%
Bootstrap support for F6V2B2 as seed ortholog is 100%.
Bootstrap support for D3BUW4 as seed ortholog is 100%.

Group of orthologs #1550. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.pallidum:134

H2XXK6              	100.00%		D3BGW8              	100.00%
Bootstrap support for H2XXK6 as seed ortholog is 100%.
Bootstrap support for D3BGW8 as seed ortholog is 100%.

Group of orthologs #1551. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.pallidum:134

H2XPR5              	100.00%		D3BQQ8              	100.00%
Bootstrap support for H2XPR5 as seed ortholog is 100%.
Bootstrap support for D3BQQ8 as seed ortholog is 100%.

Group of orthologs #1552. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 P.pallidum:134

I6L2C8              	100.00%		D3BH90              	100.00%
Bootstrap support for I6L2C8 as seed ortholog is 100%.
Bootstrap support for D3BH90 as seed ortholog is 100%.

Group of orthologs #1553. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 P.pallidum:133

H2XLJ6              	100.00%		D3AY24              	100.00%
Bootstrap support for H2XLJ6 as seed ortholog is 89%.
Bootstrap support for D3AY24 as seed ortholog is 100%.

Group of orthologs #1554. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.pallidum:133

F6ZG04              	100.00%		D3B7V9              	100.00%
Bootstrap support for F6ZG04 as seed ortholog is 100%.
Bootstrap support for D3B7V9 as seed ortholog is 100%.

Group of orthologs #1555. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.pallidum:133

F6T2D0              	100.00%		D3BNS1              	100.00%
Bootstrap support for F6T2D0 as seed ortholog is 100%.
Bootstrap support for D3BNS1 as seed ortholog is 100%.

Group of orthologs #1556. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.pallidum:133

H2XSI3              	100.00%		D3AY36              	100.00%
Bootstrap support for H2XSI3 as seed ortholog is 97%.
Bootstrap support for D3AY36 as seed ortholog is 100%.

Group of orthologs #1557. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.pallidum:84

H2XUW4              	100.00%		D3BAG5              	100.00%
Bootstrap support for H2XUW4 as seed ortholog is 91%.
Bootstrap support for D3BAG5 as seed ortholog is 99%.

Group of orthologs #1558. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 P.pallidum:133

H2XNY7              	100.00%		D3BGV1              	100.00%
Bootstrap support for H2XNY7 as seed ortholog is 100%.
Bootstrap support for D3BGV1 as seed ortholog is 100%.

Group of orthologs #1559. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 P.pallidum:132

F7A8L8              	100.00%		D3AY17              	100.00%
Bootstrap support for F7A8L8 as seed ortholog is 100%.
Bootstrap support for D3AY17 as seed ortholog is 100%.

Group of orthologs #1560. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 P.pallidum:28

F6XDJ2              	100.00%		D3B8B0              	100.00%
Bootstrap support for F6XDJ2 as seed ortholog is 73%.
Alternative seed ortholog is F7API1 (26 bits away from this cluster)
Bootstrap support for D3B8B0 as seed ortholog is 77%.

Group of orthologs #1561. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.pallidum:132

H2XQH7              	100.00%		D3B7Y6              	100.00%
Bootstrap support for H2XQH7 as seed ortholog is 99%.
Bootstrap support for D3B7Y6 as seed ortholog is 100%.

Group of orthologs #1562. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 P.pallidum:132

F7BJM0              	100.00%		D3BG92              	100.00%
Bootstrap support for F7BJM0 as seed ortholog is 100%.
Bootstrap support for D3BG92 as seed ortholog is 100%.

Group of orthologs #1563. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 P.pallidum:37

F7AAW0              	100.00%		D3BU16              	100.00%
Bootstrap support for F7AAW0 as seed ortholog is 95%.
Bootstrap support for D3BU16 as seed ortholog is 97%.

Group of orthologs #1564. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.pallidum:131

H2XYL2              	100.00%		D3BQP2              	100.00%
F6U3R5              	14.56%		
Bootstrap support for H2XYL2 as seed ortholog is 100%.
Bootstrap support for D3BQP2 as seed ortholog is 100%.

Group of orthologs #1565. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:1

F6R2P7              	100.00%		D3AW96              	100.00%
Bootstrap support for F6R2P7 as seed ortholog is 99%.
Bootstrap support for D3AW96 as seed ortholog is 86%.

Group of orthologs #1566. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.pallidum:8

F6PP23              	100.00%		D3B7C2              	100.00%
Bootstrap support for F6PP23 as seed ortholog is 100%.
Bootstrap support for D3B7C2 as seed ortholog is 81%.

Group of orthologs #1567. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:131

F6PP92              	100.00%		D3BCH8              	100.00%
Bootstrap support for F6PP92 as seed ortholog is 99%.
Bootstrap support for D3BCH8 as seed ortholog is 100%.

Group of orthologs #1568. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.pallidum:131

F6R0P0              	100.00%		D3B9Y5              	100.00%
Bootstrap support for F6R0P0 as seed ortholog is 100%.
Bootstrap support for D3B9Y5 as seed ortholog is 100%.

Group of orthologs #1569. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.pallidum:131

F6QEH8              	100.00%		D3BGL9              	100.00%
Bootstrap support for F6QEH8 as seed ortholog is 100%.
Bootstrap support for D3BGL9 as seed ortholog is 100%.

Group of orthologs #1570. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.pallidum:86

F6U899              	100.00%		D3BB72              	100.00%
Bootstrap support for F6U899 as seed ortholog is 100%.
Bootstrap support for D3BB72 as seed ortholog is 99%.

Group of orthologs #1571. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.pallidum:131

F7ALA2              	100.00%		D3AXJ8              	100.00%
Bootstrap support for F7ALA2 as seed ortholog is 100%.
Bootstrap support for D3AXJ8 as seed ortholog is 100%.

Group of orthologs #1572. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.pallidum:131

F6RKZ8              	100.00%		D3BV55              	100.00%
Bootstrap support for F6RKZ8 as seed ortholog is 100%.
Bootstrap support for D3BV55 as seed ortholog is 100%.

Group of orthologs #1573. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.pallidum:131

H2XPZ0              	100.00%		D3B4F8              	100.00%
Bootstrap support for H2XPZ0 as seed ortholog is 100%.
Bootstrap support for D3B4F8 as seed ortholog is 100%.

Group of orthologs #1574. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.pallidum:131

H2XLJ5              	100.00%		D3BIL0              	100.00%
Bootstrap support for H2XLJ5 as seed ortholog is 91%.
Bootstrap support for D3BIL0 as seed ortholog is 100%.

Group of orthologs #1575. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.pallidum:26

F7B496              	100.00%		D3BUZ0              	100.00%
Bootstrap support for F7B496 as seed ortholog is 97%.
Bootstrap support for D3BUZ0 as seed ortholog is 88%.

Group of orthologs #1576. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 P.pallidum:131

Q4H3U1              	100.00%		D3BM04              	100.00%
Bootstrap support for Q4H3U1 as seed ortholog is 100%.
Bootstrap support for D3BM04 as seed ortholog is 100%.

Group of orthologs #1577. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.pallidum:130

F6PWH7              	100.00%		D3B0K7              	100.00%
Bootstrap support for F6PWH7 as seed ortholog is 100%.
Bootstrap support for D3B0K7 as seed ortholog is 100%.

Group of orthologs #1578. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.pallidum:130

F7B6W8              	100.00%		D3B3Z8              	100.00%
Bootstrap support for F7B6W8 as seed ortholog is 100%.
Bootstrap support for D3B3Z8 as seed ortholog is 100%.

Group of orthologs #1579. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.pallidum:130

F6ZYA6              	100.00%		D3B9L7              	100.00%
Bootstrap support for F6ZYA6 as seed ortholog is 100%.
Bootstrap support for D3B9L7 as seed ortholog is 100%.

Group of orthologs #1580. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.pallidum:130

F6Y0M4              	100.00%		D3BHC2              	100.00%
Bootstrap support for F6Y0M4 as seed ortholog is 100%.
Bootstrap support for D3BHC2 as seed ortholog is 100%.

Group of orthologs #1581. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.pallidum:130

F7AAE8              	100.00%		D3BF17              	100.00%
Bootstrap support for F7AAE8 as seed ortholog is 100%.
Bootstrap support for D3BF17 as seed ortholog is 100%.

Group of orthologs #1582. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.pallidum:27

F7AGZ7              	100.00%		D3BKR9              	100.00%
Bootstrap support for F7AGZ7 as seed ortholog is 100%.
Bootstrap support for D3BKR9 as seed ortholog is 99%.

Group of orthologs #1583. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 P.pallidum:130

H2XL93              	100.00%		D3BI19              	100.00%
Bootstrap support for H2XL93 as seed ortholog is 100%.
Bootstrap support for D3BI19 as seed ortholog is 100%.

Group of orthologs #1584. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.pallidum:42

F6PM82              	100.00%		D3B5T3              	100.00%
F6QRC2              	100.00%		
F6V8I4              	100.00%		
F7ASL8              	100.00%		
F6TMG7              	34.46%		
F7ASM9              	19.07%		
F6SJC3              	8.99%		
F6WRZ9              	6.37%		
Bootstrap support for F6PM82 as seed ortholog is 94%.
Bootstrap support for F6QRC2 as seed ortholog is 93%.
Bootstrap support for F6V8I4 as seed ortholog is 95%.
Bootstrap support for F7ASL8 as seed ortholog is 94%.
Bootstrap support for D3B5T3 as seed ortholog is 93%.

Group of orthologs #1585. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 P.pallidum:6

F6X0B6              	100.00%		D3BJC4              	100.00%
                    	       		D3BK51              	100.00%
Bootstrap support for F6X0B6 as seed ortholog is 42%.
Alternative seed ortholog is F6Z1B8 (7 bits away from this cluster)
Bootstrap support for D3BJC4 as seed ortholog is 41%.
Alternative seed ortholog is D3BKR3 (6 bits away from this cluster)
Bootstrap support for D3BK51 as seed ortholog is 42%.
Alternative seed ortholog is D3BKR3 (6 bits away from this cluster)

Group of orthologs #1586. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.pallidum:129

H2XJY8              	100.00%		D3BNM4              	100.00%
F7AA01              	38.86%		
Bootstrap support for H2XJY8 as seed ortholog is 100%.
Bootstrap support for D3BNM4 as seed ortholog is 100%.

Group of orthologs #1587. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.pallidum:88

F6QXX8              	100.00%		D3BAK3              	100.00%
Bootstrap support for F6QXX8 as seed ortholog is 100%.
Bootstrap support for D3BAK3 as seed ortholog is 100%.

Group of orthologs #1588. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.pallidum:129

F6YMT8              	100.00%		D3BHL3              	100.00%
Bootstrap support for F6YMT8 as seed ortholog is 100%.
Bootstrap support for D3BHL3 as seed ortholog is 100%.

Group of orthologs #1589. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.pallidum:129

F6UBQ5              	100.00%		D3BSD3              	100.00%
Bootstrap support for F6UBQ5 as seed ortholog is 100%.
Bootstrap support for D3BSD3 as seed ortholog is 100%.

Group of orthologs #1590. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 P.pallidum:81

F7BGY2              	100.00%		D3BEA5              	100.00%
Bootstrap support for F7BGY2 as seed ortholog is 56%.
Alternative seed ortholog is F6TX66 (6 bits away from this cluster)
Bootstrap support for D3BEA5 as seed ortholog is 99%.

Group of orthologs #1591. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.pallidum:129

H2XUA2              	100.00%		D3BFF1              	100.00%
Bootstrap support for H2XUA2 as seed ortholog is 100%.
Bootstrap support for D3BFF1 as seed ortholog is 100%.

Group of orthologs #1592. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 P.pallidum:129

H2XWA4              	100.00%		D3BL81              	100.00%
Bootstrap support for H2XWA4 as seed ortholog is 100%.
Bootstrap support for D3BL81 as seed ortholog is 100%.

Group of orthologs #1593. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.pallidum:128

F6T3G6              	100.00%		D3B591              	100.00%
F6WG12              	41.30%		
Bootstrap support for F6T3G6 as seed ortholog is 100%.
Bootstrap support for D3B591 as seed ortholog is 100%.

Group of orthologs #1594. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.pallidum:128

F6UTG5              	100.00%		D3BH99              	100.00%
                    	       		D3B1C3              	10.92%
Bootstrap support for F6UTG5 as seed ortholog is 99%.
Bootstrap support for D3BH99 as seed ortholog is 100%.

Group of orthologs #1595. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.pallidum:128

F6PNC3              	100.00%		D3B4X7              	100.00%
Bootstrap support for F6PNC3 as seed ortholog is 100%.
Bootstrap support for D3B4X7 as seed ortholog is 100%.

Group of orthologs #1596. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.pallidum:128

F6UY72              	100.00%		D3B013              	100.00%
Bootstrap support for F6UY72 as seed ortholog is 87%.
Bootstrap support for D3B013 as seed ortholog is 100%.

Group of orthologs #1597. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.pallidum:128

F7B4T0              	100.00%		D3B1I7              	100.00%
Bootstrap support for F7B4T0 as seed ortholog is 100%.
Bootstrap support for D3B1I7 as seed ortholog is 100%.

Group of orthologs #1598. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.pallidum:81

H2XS91              	100.00%		D3B3D4              	100.00%
Bootstrap support for H2XS91 as seed ortholog is 100%.
Bootstrap support for D3B3D4 as seed ortholog is 98%.

Group of orthologs #1599. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.pallidum:128

F7BKM3              	100.00%		D3BN55              	100.00%
Bootstrap support for F7BKM3 as seed ortholog is 100%.
Bootstrap support for D3BN55 as seed ortholog is 100%.

Group of orthologs #1600. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.pallidum:128

H2XPG9              	100.00%		D3BKE7              	100.00%
Bootstrap support for H2XPG9 as seed ortholog is 100%.
Bootstrap support for D3BKE7 as seed ortholog is 100%.

Group of orthologs #1601. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.pallidum:128

H2XL84              	100.00%		D3BTD9              	100.00%
Bootstrap support for H2XL84 as seed ortholog is 100%.
Bootstrap support for D3BTD9 as seed ortholog is 100%.

Group of orthologs #1602. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 P.pallidum:128

H2XN21              	100.00%		D3BS32              	100.00%
Bootstrap support for H2XN21 as seed ortholog is 100%.
Bootstrap support for D3BS32 as seed ortholog is 100%.

Group of orthologs #1603. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.pallidum:127

F6U621              	100.00%		D3B497              	100.00%
F7A786              	63.00%		
F7A0S5              	49.88%		
F7AQ12              	5.85%		
Bootstrap support for F6U621 as seed ortholog is 99%.
Bootstrap support for D3B497 as seed ortholog is 100%.

Group of orthologs #1604. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.pallidum:127

F6W1X7              	100.00%		D3B4U0              	100.00%
F6Z9B3              	18.72%		
Bootstrap support for F6W1X7 as seed ortholog is 100%.
Bootstrap support for D3B4U0 as seed ortholog is 100%.

Group of orthologs #1605. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.pallidum:127

F6UXH9              	100.00%		D3B3U6              	100.00%
Bootstrap support for F6UXH9 as seed ortholog is 100%.
Bootstrap support for D3B3U6 as seed ortholog is 100%.

Group of orthologs #1606. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.pallidum:127

F6UA18              	100.00%		D3BDP9              	100.00%
Bootstrap support for F6UA18 as seed ortholog is 100%.
Bootstrap support for D3BDP9 as seed ortholog is 100%.

Group of orthologs #1607. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.pallidum:127

F6TLB6              	100.00%		D3BMH0              	100.00%
Bootstrap support for F6TLB6 as seed ortholog is 100%.
Bootstrap support for D3BMH0 as seed ortholog is 100%.

Group of orthologs #1608. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.pallidum:127

F6ZY58              	100.00%		D3BER5              	100.00%
Bootstrap support for F6ZY58 as seed ortholog is 100%.
Bootstrap support for D3BER5 as seed ortholog is 100%.

Group of orthologs #1609. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 P.pallidum:127

F7A4V3              	100.00%		D3BL46              	100.00%
Bootstrap support for F7A4V3 as seed ortholog is 100%.
Bootstrap support for D3BL46 as seed ortholog is 100%.

Group of orthologs #1610. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.pallidum:126

F6VES6              	100.00%		D3BIA2              	100.00%
F6W5K3              	54.13%		
F6ZLS3              	42.99%		
F6YSI6              	36.70%		
F6TJQ3              	15.60%		
H2Y1E7              	11.93%		
F6PRI9              	6.55%		
Bootstrap support for F6VES6 as seed ortholog is 100%.
Bootstrap support for D3BIA2 as seed ortholog is 100%.

Group of orthologs #1611. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.pallidum:126

H2XPZ6              	100.00%		D3B3B5              	100.00%
F6VTU7              	41.81%		
F6U0P5              	33.66%		
F6W9Y0              	28.75%		
F6W9J4              	12.37%		
Bootstrap support for H2XPZ6 as seed ortholog is 100%.
Bootstrap support for D3B3B5 as seed ortholog is 100%.

Group of orthologs #1612. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.pallidum:126

F7AX27              	100.00%		D3BAZ9              	100.00%
H2XW88              	9.44%		
Bootstrap support for F7AX27 as seed ortholog is 100%.
Bootstrap support for D3BAZ9 as seed ortholog is 100%.

Group of orthologs #1613. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.pallidum:19

F6QXC2              	100.00%		D3B238              	100.00%
Bootstrap support for F6QXC2 as seed ortholog is 84%.
Bootstrap support for D3B238 as seed ortholog is 69%.
Alternative seed ortholog is D3B1H0 (19 bits away from this cluster)

Group of orthologs #1614. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:126

F6QGW5              	100.00%		D3BB70              	100.00%
Bootstrap support for F6QGW5 as seed ortholog is 98%.
Bootstrap support for D3BB70 as seed ortholog is 100%.

Group of orthologs #1615. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.pallidum:126

F7AZA1              	100.00%		D3AXF9              	100.00%
Bootstrap support for F7AZA1 as seed ortholog is 100%.
Bootstrap support for D3AXF9 as seed ortholog is 100%.

Group of orthologs #1616. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.pallidum:126

F6WH15              	100.00%		D3BM86              	100.00%
Bootstrap support for F6WH15 as seed ortholog is 100%.
Bootstrap support for D3BM86 as seed ortholog is 100%.

Group of orthologs #1617. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.pallidum:126

F6YIK6              	100.00%		D3BTK0              	100.00%
Bootstrap support for F6YIK6 as seed ortholog is 100%.
Bootstrap support for D3BTK0 as seed ortholog is 100%.

Group of orthologs #1618. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.pallidum:126

H2XN33              	100.00%		D3BJ52              	100.00%
Bootstrap support for H2XN33 as seed ortholog is 100%.
Bootstrap support for D3BJ52 as seed ortholog is 100%.

Group of orthologs #1619. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 P.pallidum:126

H2XNC6              	100.00%		D3BQT7              	100.00%
Bootstrap support for H2XNC6 as seed ortholog is 100%.
Bootstrap support for D3BQT7 as seed ortholog is 100%.

Group of orthologs #1620. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.pallidum:125

F6S8X6              	100.00%		D3AYE2              	100.00%
F6TP12              	100.00%		
Bootstrap support for F6S8X6 as seed ortholog is 100%.
Bootstrap support for F6TP12 as seed ortholog is 100%.
Bootstrap support for D3AYE2 as seed ortholog is 100%.

Group of orthologs #1621. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.pallidum:125

F6UF11              	100.00%		D3B214              	100.00%
F6Z2G5              	11.33%		
Bootstrap support for F6UF11 as seed ortholog is 100%.
Bootstrap support for D3B214 as seed ortholog is 100%.

Group of orthologs #1622. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.pallidum:125

Q1RPZ3              	100.00%		D3AXP2              	100.00%
F6SY80              	21.42%		
Bootstrap support for Q1RPZ3 as seed ortholog is 100%.
Bootstrap support for D3AXP2 as seed ortholog is 100%.

Group of orthologs #1623. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.pallidum:125

F6PLX2              	100.00%		D3AZD1              	100.00%
Bootstrap support for F6PLX2 as seed ortholog is 100%.
Bootstrap support for D3AZD1 as seed ortholog is 100%.

Group of orthologs #1624. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 P.pallidum:125

F7A2R6              	100.00%		D3BRK8              	100.00%
Bootstrap support for F7A2R6 as seed ortholog is 100%.
Bootstrap support for D3BRK8 as seed ortholog is 100%.

Group of orthologs #1625. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 P.pallidum:11

F6QC45              	100.00%		D3B7N4              	100.00%
Bootstrap support for F6QC45 as seed ortholog is 96%.
Bootstrap support for D3B7N4 as seed ortholog is 69%.
Alternative seed ortholog is D3BM15 (11 bits away from this cluster)

Group of orthologs #1626. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.pallidum:124

F6ZQ58              	100.00%		D3B6V9              	100.00%
Bootstrap support for F6ZQ58 as seed ortholog is 99%.
Bootstrap support for D3B6V9 as seed ortholog is 100%.

Group of orthologs #1627. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.pallidum:124

F6UN42              	100.00%		D3BIU2              	100.00%
Bootstrap support for F6UN42 as seed ortholog is 100%.
Bootstrap support for D3BIU2 as seed ortholog is 100%.

Group of orthologs #1628. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:124

F6X2B6              	100.00%		D3BK99              	100.00%
Bootstrap support for F6X2B6 as seed ortholog is 98%.
Bootstrap support for D3BK99 as seed ortholog is 100%.

Group of orthologs #1629. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.pallidum:124

H2XVN4              	100.00%		D3AZM3              	100.00%
Bootstrap support for H2XVN4 as seed ortholog is 100%.
Bootstrap support for D3AZM3 as seed ortholog is 100%.

Group of orthologs #1630. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.pallidum:124

F6WUF6              	100.00%		D3BSQ1              	100.00%
Bootstrap support for F6WUF6 as seed ortholog is 100%.
Bootstrap support for D3BSQ1 as seed ortholog is 100%.

Group of orthologs #1631. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.pallidum:124

H2Y1L9              	100.00%		D3B767              	100.00%
Bootstrap support for H2Y1L9 as seed ortholog is 100%.
Bootstrap support for D3B767 as seed ortholog is 100%.

Group of orthologs #1632. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 P.pallidum:124

H2XR59              	100.00%		D3BSC7              	100.00%
Bootstrap support for H2XR59 as seed ortholog is 100%.
Bootstrap support for D3BSC7 as seed ortholog is 100%.

Group of orthologs #1633. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.pallidum:25

H2XNP4              	100.00%		D3BEM5              	100.00%
F6TLX0              	9.25%		D3BNL1              	33.07%
F6Z4E6              	5.93%		D3B032              	18.33%
F6PUP9              	5.81%		D3B1P0              	17.73%
H2Y144              	5.10%		D3BT93              	5.98%
Bootstrap support for H2XNP4 as seed ortholog is 89%.
Bootstrap support for D3BEM5 as seed ortholog is 71%.
Alternative seed ortholog is D3B3V6 (25 bits away from this cluster)

Group of orthologs #1634. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 P.pallidum:19

F6S2B0              	100.00%		D3AXC7              	100.00%
H2XS77              	55.30%		
F6S294              	50.65%		
F7BEK9              	39.28%		
F6U973              	38.76%		
H2XZS1              	38.50%		
F7AWY7              	33.07%		
Bootstrap support for F6S2B0 as seed ortholog is 56%.
Alternative seed ortholog is L7N0U6 (7 bits away from this cluster)
Bootstrap support for D3AXC7 as seed ortholog is 85%.

Group of orthologs #1635. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:48

F6RZD9              	100.00%		D3BRH3              	100.00%
F6SY55              	28.36%		
Bootstrap support for F6RZD9 as seed ortholog is 99%.
Bootstrap support for D3BRH3 as seed ortholog is 68%.
Alternative seed ortholog is D3BTF5 (48 bits away from this cluster)

Group of orthologs #1636. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.pallidum:54

H2Y256              	100.00%		D3BL51              	100.00%
                    	       		D3BR40              	7.45%
Bootstrap support for H2Y256 as seed ortholog is 100%.
Bootstrap support for D3BL51 as seed ortholog is 95%.

Group of orthologs #1637. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 P.pallidum:123

F6Q643              	100.00%		D3B2X0              	100.00%
Bootstrap support for F6Q643 as seed ortholog is 82%.
Bootstrap support for D3B2X0 as seed ortholog is 100%.

Group of orthologs #1638. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.pallidum:123

F6TAV4              	100.00%		D3B0G5              	100.00%
Bootstrap support for F6TAV4 as seed ortholog is 100%.
Bootstrap support for D3B0G5 as seed ortholog is 100%.

Group of orthologs #1639. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.pallidum:123

F6R1B9              	100.00%		D3BGC3              	100.00%
Bootstrap support for F6R1B9 as seed ortholog is 100%.
Bootstrap support for D3BGC3 as seed ortholog is 100%.

Group of orthologs #1640. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.pallidum:123

F6UUF9              	100.00%		D3BAH1              	100.00%
Bootstrap support for F6UUF9 as seed ortholog is 89%.
Bootstrap support for D3BAH1 as seed ortholog is 100%.

Group of orthologs #1641. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.pallidum:123

F6XVX1              	100.00%		D3BB97              	100.00%
Bootstrap support for F6XVX1 as seed ortholog is 100%.
Bootstrap support for D3BB97 as seed ortholog is 100%.

Group of orthologs #1642. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.pallidum:21

H2XX74              	100.00%		D3B1E5              	100.00%
Bootstrap support for H2XX74 as seed ortholog is 100%.
Bootstrap support for D3B1E5 as seed ortholog is 96%.

Group of orthologs #1643. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 P.pallidum:28

H2Y3S8              	100.00%		D3AX86              	100.00%
Bootstrap support for H2Y3S8 as seed ortholog is 64%.
Alternative seed ortholog is F6VSD5 (16 bits away from this cluster)
Bootstrap support for D3AX86 as seed ortholog is 52%.
Alternative seed ortholog is D3BJS6 (28 bits away from this cluster)

Group of orthologs #1644. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 P.pallidum:123

H2XYD5              	100.00%		D3B863              	100.00%
Bootstrap support for H2XYD5 as seed ortholog is 100%.
Bootstrap support for D3B863 as seed ortholog is 100%.

Group of orthologs #1645. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 P.pallidum:38

F6Y3J4              	100.00%		D3BRS7              	100.00%
                    	       		D3BQ27              	26.32%
                    	       		D3B667              	16.48%
Bootstrap support for F6Y3J4 as seed ortholog is 83%.
Bootstrap support for D3BRS7 as seed ortholog is 87%.

Group of orthologs #1646. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 P.pallidum:2

F6SQC0              	100.00%		D3AZA0              	100.00%
Bootstrap support for F6SQC0 as seed ortholog is 100%.
Bootstrap support for D3AZA0 as seed ortholog is 52%.
Alternative seed ortholog is D3BRM0 (2 bits away from this cluster)

Group of orthologs #1647. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 P.pallidum:122

F6W7H5              	100.00%		D3B733              	100.00%
Bootstrap support for F6W7H5 as seed ortholog is 100%.
Bootstrap support for D3B733 as seed ortholog is 100%.

Group of orthologs #1648. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 P.pallidum:35

F6YVE9              	100.00%		D3B1P2              	100.00%
Bootstrap support for F6YVE9 as seed ortholog is 90%.
Bootstrap support for D3B1P2 as seed ortholog is 88%.

Group of orthologs #1649. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 P.pallidum:122

F6PJB8              	100.00%		D3BRN2              	100.00%
Bootstrap support for F6PJB8 as seed ortholog is 100%.
Bootstrap support for D3BRN2 as seed ortholog is 100%.

Group of orthologs #1650. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 P.pallidum:122

F6SCE7              	100.00%		D3BU39              	100.00%
Bootstrap support for F6SCE7 as seed ortholog is 100%.
Bootstrap support for D3BU39 as seed ortholog is 100%.

Group of orthologs #1651. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.pallidum:55

F6RUS9              	100.00%		D3B7J8              	100.00%
F6Q3M5              	29.38%		
Bootstrap support for F6RUS9 as seed ortholog is 99%.
Bootstrap support for D3B7J8 as seed ortholog is 97%.

Group of orthologs #1652. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.pallidum:121

F6ZMG2              	100.00%		D3AWY0              	100.00%
F6XNX3              	59.66%		
Bootstrap support for F6ZMG2 as seed ortholog is 100%.
Bootstrap support for D3AWY0 as seed ortholog is 100%.

Group of orthologs #1653. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.pallidum:121

F6XWK4              	100.00%		D3B4R9              	100.00%
Bootstrap support for F6XWK4 as seed ortholog is 100%.
Bootstrap support for D3B4R9 as seed ortholog is 100%.

Group of orthologs #1654. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.pallidum:121

F6WCM2              	100.00%		D3BGQ6              	100.00%
Bootstrap support for F6WCM2 as seed ortholog is 100%.
Bootstrap support for D3BGQ6 as seed ortholog is 100%.

Group of orthologs #1655. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.pallidum:121

Q4H3T3              	100.00%		D3B2P1              	100.00%
Bootstrap support for Q4H3T3 as seed ortholog is 100%.
Bootstrap support for D3B2P1 as seed ortholog is 100%.

Group of orthologs #1656. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 P.pallidum:61

H2XZN8              	100.00%		D3BBE5              	100.00%
Bootstrap support for H2XZN8 as seed ortholog is 80%.
Bootstrap support for D3BBE5 as seed ortholog is 98%.

Group of orthologs #1657. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.pallidum:49

H2XTS6              	100.00%		D3BHK9              	100.00%
Bootstrap support for H2XTS6 as seed ortholog is 100%.
Bootstrap support for D3BHK9 as seed ortholog is 88%.

Group of orthologs #1658. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 P.pallidum:121

H2XZ76              	100.00%		D3BKQ3              	100.00%
Bootstrap support for H2XZ76 as seed ortholog is 100%.
Bootstrap support for D3BKQ3 as seed ortholog is 100%.

Group of orthologs #1659. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.pallidum:62

H2Y1W9              	100.00%		D3BT83              	100.00%
Bootstrap support for H2Y1W9 as seed ortholog is 86%.
Bootstrap support for D3BT83 as seed ortholog is 91%.

Group of orthologs #1660. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.pallidum:120

H2XNE6              	100.00%		D3BES9              	100.00%
H2XR92              	49.50%		
F6YNR2              	15.71%		
F6S021              	13.12%		
Bootstrap support for H2XNE6 as seed ortholog is 100%.
Bootstrap support for D3BES9 as seed ortholog is 100%.

Group of orthologs #1661. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.pallidum:120

F6VXS0              	100.00%		D3AZF8              	100.00%
Bootstrap support for F6VXS0 as seed ortholog is 100%.
Bootstrap support for D3AZF8 as seed ortholog is 100%.

Group of orthologs #1662. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.pallidum:120

F6PH90              	100.00%		D3BG94              	100.00%
Bootstrap support for F6PH90 as seed ortholog is 100%.
Bootstrap support for D3BG94 as seed ortholog is 100%.

Group of orthologs #1663. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.pallidum:120

F6RE18              	100.00%		D3BSK0              	100.00%
Bootstrap support for F6RE18 as seed ortholog is 100%.
Bootstrap support for D3BSK0 as seed ortholog is 100%.

Group of orthologs #1664. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.pallidum:120

F6TSS8              	100.00%		D3BTD2              	100.00%
Bootstrap support for F6TSS8 as seed ortholog is 100%.
Bootstrap support for D3BTD2 as seed ortholog is 100%.

Group of orthologs #1665. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.pallidum:120

H2XTZ1              	100.00%		D3B0E6              	100.00%
Bootstrap support for H2XTZ1 as seed ortholog is 100%.
Bootstrap support for D3B0E6 as seed ortholog is 100%.

Group of orthologs #1666. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.pallidum:120

F7A9Q6              	100.00%		D3BIL3              	100.00%
Bootstrap support for F7A9Q6 as seed ortholog is 100%.
Bootstrap support for D3BIL3 as seed ortholog is 100%.

Group of orthologs #1667. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 P.pallidum:120

H2XPV7              	100.00%		D3BVM6              	100.00%
Bootstrap support for H2XPV7 as seed ortholog is 100%.
Bootstrap support for D3BVM6 as seed ortholog is 100%.

Group of orthologs #1668. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.pallidum:119

F6WCA3              	100.00%		D3BRK0              	100.00%
                    	       		D3BKW4              	5.26%
Bootstrap support for F6WCA3 as seed ortholog is 100%.
Bootstrap support for D3BRK0 as seed ortholog is 100%.

Group of orthologs #1669. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.pallidum:119

F7AI05              	100.00%		D3AXK3              	100.00%
Bootstrap support for F7AI05 as seed ortholog is 100%.
Bootstrap support for D3AXK3 as seed ortholog is 100%.

Group of orthologs #1670. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.pallidum:23

F6YMX2              	100.00%		D3BBT3              	100.00%
Bootstrap support for F6YMX2 as seed ortholog is 100%.
Bootstrap support for D3BBT3 as seed ortholog is 73%.
Alternative seed ortholog is D3AY51 (23 bits away from this cluster)

Group of orthologs #1671. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 P.pallidum:119

H2XYB4              	100.00%		D3B9I7              	100.00%
Bootstrap support for H2XYB4 as seed ortholog is 100%.
Bootstrap support for D3B9I7 as seed ortholog is 100%.

Group of orthologs #1672. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.pallidum:10

F6ZNK2              	100.00%		D3BFK2              	100.00%
F6ZUQ2              	8.65%		
Bootstrap support for F6ZNK2 as seed ortholog is 100%.
Bootstrap support for D3BFK2 as seed ortholog is 68%.
Alternative seed ortholog is D3B9J2 (10 bits away from this cluster)

Group of orthologs #1673. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.pallidum:51

F6VKL9              	100.00%		D3BQT5              	100.00%
F6Y6M4              	39.53%		
Bootstrap support for F6VKL9 as seed ortholog is 100%.
Bootstrap support for D3BQT5 as seed ortholog is 53%.
Alternative seed ortholog is D3BPG3 (51 bits away from this cluster)

Group of orthologs #1674. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 P.pallidum:118

F6X863              	100.00%		D3BR00              	100.00%
                    	       		D3BR01              	37.54%
Bootstrap support for F6X863 as seed ortholog is 71%.
Alternative seed ortholog is F7AGI1 (17 bits away from this cluster)
Bootstrap support for D3BR00 as seed ortholog is 100%.

Group of orthologs #1675. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.pallidum:118

H2XPN7              	100.00%		D3BEQ9              	100.00%
                    	       		D3BSS6              	78.26%
Bootstrap support for H2XPN7 as seed ortholog is 100%.
Bootstrap support for D3BEQ9 as seed ortholog is 100%.

Group of orthologs #1676. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 P.pallidum:118

F6UMH6              	100.00%		D3B8Q0              	100.00%
Bootstrap support for F6UMH6 as seed ortholog is 46%.
Alternative seed ortholog is Q1RPW1 (1 bits away from this cluster)
Bootstrap support for D3B8Q0 as seed ortholog is 100%.

Group of orthologs #1677. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.pallidum:118

F6URK3              	100.00%		D3BBS6              	100.00%
Bootstrap support for F6URK3 as seed ortholog is 100%.
Bootstrap support for D3BBS6 as seed ortholog is 100%.

Group of orthologs #1678. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.pallidum:118

F6SET0              	100.00%		D3BRM1              	100.00%
Bootstrap support for F6SET0 as seed ortholog is 100%.
Bootstrap support for D3BRM1 as seed ortholog is 100%.

Group of orthologs #1679. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.pallidum:118

H2XTB8              	100.00%		D3AY86              	100.00%
Bootstrap support for H2XTB8 as seed ortholog is 100%.
Bootstrap support for D3AY86 as seed ortholog is 100%.

Group of orthologs #1680. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.pallidum:118

F6VN53              	100.00%		D3BTR2              	100.00%
Bootstrap support for F6VN53 as seed ortholog is 100%.
Bootstrap support for D3BTR2 as seed ortholog is 100%.

Group of orthologs #1681. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.pallidum:118

H2XWK5              	100.00%		D3B4Y0              	100.00%
Bootstrap support for H2XWK5 as seed ortholog is 100%.
Bootstrap support for D3B4Y0 as seed ortholog is 100%.

Group of orthologs #1682. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.pallidum:67

H2XY81              	100.00%		D3B9C3              	100.00%
Bootstrap support for H2XY81 as seed ortholog is 100%.
Bootstrap support for D3B9C3 as seed ortholog is 99%.

Group of orthologs #1683. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.pallidum:118

H2XTM5              	100.00%		D3BHD5              	100.00%
Bootstrap support for H2XTM5 as seed ortholog is 100%.
Bootstrap support for D3BHD5 as seed ortholog is 100%.

Group of orthologs #1684. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 P.pallidum:118

H2XWF6              	100.00%		D3BRL9              	100.00%
Bootstrap support for H2XWF6 as seed ortholog is 100%.
Bootstrap support for D3BRL9 as seed ortholog is 100%.

Group of orthologs #1685. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.pallidum:117

F6Q7X0              	100.00%		D3AXV8              	100.00%
Bootstrap support for F6Q7X0 as seed ortholog is 100%.
Bootstrap support for D3AXV8 as seed ortholog is 100%.

Group of orthologs #1686. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 P.pallidum:22

F6PN13              	100.00%		D3B478              	100.00%
Bootstrap support for F6PN13 as seed ortholog is 87%.
Bootstrap support for D3B478 as seed ortholog is 77%.

Group of orthologs #1687. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.pallidum:117

F6WIP7              	100.00%		D3BJE1              	100.00%
Bootstrap support for F6WIP7 as seed ortholog is 100%.
Bootstrap support for D3BJE1 as seed ortholog is 100%.

Group of orthologs #1688. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.pallidum:117

F7B2Y0              	100.00%		D3B8X0              	100.00%
Bootstrap support for F7B2Y0 as seed ortholog is 100%.
Bootstrap support for D3B8X0 as seed ortholog is 100%.

Group of orthologs #1689. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.pallidum:117

F7BQA9              	100.00%		D3BEH7              	100.00%
Bootstrap support for F7BQA9 as seed ortholog is 100%.
Bootstrap support for D3BEH7 as seed ortholog is 100%.

Group of orthologs #1690. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.pallidum:117

F7ASV8              	100.00%		D3BLH0              	100.00%
Bootstrap support for F7ASV8 as seed ortholog is 100%.
Bootstrap support for D3BLH0 as seed ortholog is 100%.

Group of orthologs #1691. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.pallidum:117

F6ZQ39              	100.00%		D3BR67              	100.00%
Bootstrap support for F6ZQ39 as seed ortholog is 100%.
Bootstrap support for D3BR67 as seed ortholog is 100%.

Group of orthologs #1692. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 P.pallidum:117

H2XTQ3              	100.00%		D3BC41              	100.00%
Bootstrap support for H2XTQ3 as seed ortholog is 100%.
Bootstrap support for D3BC41 as seed ortholog is 100%.

Group of orthologs #1693. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.pallidum:39

F6ZT48              	100.00%		D3BIK0              	100.00%
F6WMS1              	44.53%		D3BKN5              	14.74%
F6TXH8              	30.73%		
F6RY16              	28.39%		
F6WMR0              	23.44%		
Bootstrap support for F6ZT48 as seed ortholog is 89%.
Bootstrap support for D3BIK0 as seed ortholog is 89%.

Group of orthologs #1694. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:72

F6WU12              	100.00%		D3AVZ3              	100.00%
F6QRU4              	5.88%		
Bootstrap support for F6WU12 as seed ortholog is 100%.
Bootstrap support for D3AVZ3 as seed ortholog is 97%.

Group of orthologs #1695. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 P.pallidum:22

F6R8N5              	100.00%		D3BGE3              	100.00%
F6YX18              	10.43%		
Bootstrap support for F6R8N5 as seed ortholog is 84%.
Bootstrap support for D3BGE3 as seed ortholog is 68%.
Alternative seed ortholog is D3BF70 (22 bits away from this cluster)

Group of orthologs #1696. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:116

H2Y0Z1              	100.00%		D3BB26              	100.00%
                    	       		D3BUH1              	13.09%
Bootstrap support for H2Y0Z1 as seed ortholog is 100%.
Bootstrap support for D3BB26 as seed ortholog is 100%.

Group of orthologs #1697. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:116

F6PZV6              	100.00%		D3B5S6              	100.00%
Bootstrap support for F6PZV6 as seed ortholog is 100%.
Bootstrap support for D3B5S6 as seed ortholog is 100%.

Group of orthologs #1698. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:116

F6TQ55              	100.00%		D3BE76              	100.00%
Bootstrap support for F6TQ55 as seed ortholog is 100%.
Bootstrap support for D3BE76 as seed ortholog is 100%.

Group of orthologs #1699. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:116

F6VFA0              	100.00%		D3BAU6              	100.00%
Bootstrap support for F6VFA0 as seed ortholog is 100%.
Bootstrap support for D3BAU6 as seed ortholog is 100%.

Group of orthologs #1700. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:72

F6YB82              	100.00%		D3B4Y7              	100.00%
Bootstrap support for F6YB82 as seed ortholog is 56%.
Alternative seed ortholog is H2XX28 (47 bits away from this cluster)
Bootstrap support for D3B4Y7 as seed ortholog is 87%.

Group of orthologs #1701. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:116

F6T1Y9              	100.00%		D3BIS0              	100.00%
Bootstrap support for F6T1Y9 as seed ortholog is 100%.
Bootstrap support for D3BIS0 as seed ortholog is 100%.

Group of orthologs #1702. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:70

F6TCF8              	100.00%		D3BMA2              	100.00%
Bootstrap support for F6TCF8 as seed ortholog is 100%.
Bootstrap support for D3BMA2 as seed ortholog is 99%.

Group of orthologs #1703. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:116

H2XM38              	100.00%		D3B0L3              	100.00%
Bootstrap support for H2XM38 as seed ortholog is 100%.
Bootstrap support for D3B0L3 as seed ortholog is 100%.

Group of orthologs #1704. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:116

F6VJL7              	100.00%		D3BK76              	100.00%
Bootstrap support for F6VJL7 as seed ortholog is 100%.
Bootstrap support for D3BK76 as seed ortholog is 100%.

Group of orthologs #1705. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:116

F7B3P4              	100.00%		D3BAV6              	100.00%
Bootstrap support for F7B3P4 as seed ortholog is 100%.
Bootstrap support for D3BAV6 as seed ortholog is 100%.

Group of orthologs #1706. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:116

F6VH72              	100.00%		D3BTI1              	100.00%
Bootstrap support for F6VH72 as seed ortholog is 100%.
Bootstrap support for D3BTI1 as seed ortholog is 100%.

Group of orthologs #1707. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:116

H2XR58              	100.00%		D3BFH1              	100.00%
Bootstrap support for H2XR58 as seed ortholog is 100%.
Bootstrap support for D3BFH1 as seed ortholog is 100%.

Group of orthologs #1708. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:116

F7BFF4              	100.00%		D3BR17              	100.00%
Bootstrap support for F7BFF4 as seed ortholog is 100%.
Bootstrap support for D3BR17 as seed ortholog is 100%.

Group of orthologs #1709. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 P.pallidum:116

F7BLV7              	100.00%		D3BUP9              	100.00%
Bootstrap support for F7BLV7 as seed ortholog is 100%.
Bootstrap support for D3BUP9 as seed ortholog is 100%.

Group of orthologs #1710. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.pallidum:115

H2XJS6              	100.00%		D3B8Y7              	100.00%
H2Y222              	26.12%		
Bootstrap support for H2XJS6 as seed ortholog is 100%.
Bootstrap support for D3B8Y7 as seed ortholog is 100%.

Group of orthologs #1711. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.pallidum:115

F6VMC6              	100.00%		D3AW12              	100.00%
Bootstrap support for F6VMC6 as seed ortholog is 100%.
Bootstrap support for D3AW12 as seed ortholog is 100%.

Group of orthologs #1712. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.pallidum:115

F6RLX1              	100.00%		D3BCX0              	100.00%
Bootstrap support for F6RLX1 as seed ortholog is 100%.
Bootstrap support for D3BCX0 as seed ortholog is 100%.

Group of orthologs #1713. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.pallidum:115

F6TZK8              	100.00%		D3BC02              	100.00%
Bootstrap support for F6TZK8 as seed ortholog is 100%.
Bootstrap support for D3BC02 as seed ortholog is 100%.

Group of orthologs #1714. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.pallidum:115

H2XPL3              	100.00%		D3AZG3              	100.00%
Bootstrap support for H2XPL3 as seed ortholog is 84%.
Bootstrap support for D3AZG3 as seed ortholog is 100%.

Group of orthologs #1715. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.pallidum:115

F6XWZ8              	100.00%		D3BFQ4              	100.00%
Bootstrap support for F6XWZ8 as seed ortholog is 100%.
Bootstrap support for D3BFQ4 as seed ortholog is 100%.

Group of orthologs #1716. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.pallidum:115

H2XWZ0              	100.00%		D3AZR0              	100.00%
Bootstrap support for H2XWZ0 as seed ortholog is 100%.
Bootstrap support for D3AZR0 as seed ortholog is 100%.

Group of orthologs #1717. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.pallidum:115

F6ZLY9              	100.00%		D3BHK0              	100.00%
Bootstrap support for F6ZLY9 as seed ortholog is 100%.
Bootstrap support for D3BHK0 as seed ortholog is 100%.

Group of orthologs #1718. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.pallidum:52

H2XSQ8              	100.00%		D3BK63              	100.00%
Bootstrap support for H2XSQ8 as seed ortholog is 100%.
Bootstrap support for D3BK63 as seed ortholog is 96%.

Group of orthologs #1719. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 P.pallidum:115

H2XZJ6              	100.00%		D3BM28              	100.00%
Bootstrap support for H2XZJ6 as seed ortholog is 100%.
Bootstrap support for D3BM28 as seed ortholog is 100%.

Group of orthologs #1720. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.pallidum:114

F7B757              	100.00%		D3BVD5              	100.00%
F7B763              	67.31%		D3BVD6              	81.94%
H2XQ96              	48.72%		
H2XVH5              	48.50%		
H2XS49              	34.19%		
H2XKR4              	26.07%		
H2XNZ2              	16.24%		
H2Y1L1              	12.39%		
F6RBS2              	11.11%		
Bootstrap support for F7B757 as seed ortholog is 100%.
Bootstrap support for D3BVD5 as seed ortholog is 100%.

Group of orthologs #1721. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 P.pallidum:114

F6ZUD7              	100.00%		D3AVG4              	100.00%
                    	       		D3BBA6              	56.86%
                    	       		D3BAA3              	48.73%
Bootstrap support for F6ZUD7 as seed ortholog is 85%.
Bootstrap support for D3AVG4 as seed ortholog is 100%.

Group of orthologs #1722. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.pallidum:42

F6TVK8              	100.00%		D3AZG9              	100.00%
Bootstrap support for F6TVK8 as seed ortholog is 100%.
Bootstrap support for D3AZG9 as seed ortholog is 62%.
Alternative seed ortholog is D3B589 (42 bits away from this cluster)

Group of orthologs #1723. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.pallidum:114

F6W7Q3              	100.00%		D3AZB6              	100.00%
Bootstrap support for F6W7Q3 as seed ortholog is 100%.
Bootstrap support for D3AZB6 as seed ortholog is 100%.

Group of orthologs #1724. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.pallidum:114

F7A5L4              	100.00%		D3B583              	100.00%
Bootstrap support for F7A5L4 as seed ortholog is 100%.
Bootstrap support for D3B583 as seed ortholog is 100%.

Group of orthologs #1725. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.pallidum:47

F6QI05              	100.00%		D3BTM8              	100.00%
Bootstrap support for F6QI05 as seed ortholog is 100%.
Bootstrap support for D3BTM8 as seed ortholog is 99%.

Group of orthologs #1726. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 P.pallidum:114

F7BPM3              	100.00%		D3B613              	100.00%
Bootstrap support for F7BPM3 as seed ortholog is 75%.
Bootstrap support for D3B613 as seed ortholog is 100%.

Group of orthologs #1727. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.pallidum:114

H2XMF4              	100.00%		D3B803              	100.00%
Bootstrap support for H2XMF4 as seed ortholog is 100%.
Bootstrap support for D3B803 as seed ortholog is 100%.

Group of orthologs #1728. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 P.pallidum:3

F6Z9G9              	100.00%		D3BJ50              	100.00%
Bootstrap support for F6Z9G9 as seed ortholog is 73%.
Alternative seed ortholog is F6Z241 (28 bits away from this cluster)
Bootstrap support for D3BJ50 as seed ortholog is 53%.
Alternative seed ortholog is D3BAH8 (3 bits away from this cluster)

Group of orthologs #1729. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.pallidum:114

F6XTZ6              	100.00%		D3BN29              	100.00%
Bootstrap support for F6XTZ6 as seed ortholog is 100%.
Bootstrap support for D3BN29 as seed ortholog is 100%.

Group of orthologs #1730. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.pallidum:114

H2XS95              	100.00%		D3B5B5              	100.00%
Bootstrap support for H2XS95 as seed ortholog is 100%.
Bootstrap support for D3B5B5 as seed ortholog is 100%.

Group of orthologs #1731. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.pallidum:114

H2Y2U8              	100.00%		D3AZY2              	100.00%
Bootstrap support for H2Y2U8 as seed ortholog is 100%.
Bootstrap support for D3AZY2 as seed ortholog is 100%.

Group of orthologs #1732. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 P.pallidum:114

Q2PEE1              	100.00%		D3BU56              	100.00%
Bootstrap support for Q2PEE1 as seed ortholog is 100%.
Bootstrap support for D3BU56 as seed ortholog is 100%.

Group of orthologs #1733. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.pallidum:113

F6S3Q7              	100.00%		D3BAP4              	100.00%
Bootstrap support for F6S3Q7 as seed ortholog is 100%.
Bootstrap support for D3BAP4 as seed ortholog is 100%.

Group of orthologs #1734. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.pallidum:113

F6WRK0              	100.00%		D3B194              	100.00%
Bootstrap support for F6WRK0 as seed ortholog is 100%.
Bootstrap support for D3B194 as seed ortholog is 100%.

Group of orthologs #1735. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 P.pallidum:113

F7AT12              	100.00%		D3B144              	100.00%
Bootstrap support for F7AT12 as seed ortholog is 75%.
Bootstrap support for D3B144 as seed ortholog is 100%.

Group of orthologs #1736. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.pallidum:113

F6YQB2              	100.00%		D3BF71              	100.00%
Bootstrap support for F6YQB2 as seed ortholog is 100%.
Bootstrap support for D3BF71 as seed ortholog is 100%.

Group of orthologs #1737. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.pallidum:113

F6V1C0              	100.00%		D3BSZ4              	100.00%
Bootstrap support for F6V1C0 as seed ortholog is 100%.
Bootstrap support for D3BSZ4 as seed ortholog is 100%.

Group of orthologs #1738. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.pallidum:113

H2Y0C3              	100.00%		D3B862              	100.00%
Bootstrap support for H2Y0C3 as seed ortholog is 100%.
Bootstrap support for D3B862 as seed ortholog is 100%.

Group of orthologs #1739. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 P.pallidum:113

H2XYG3              	100.00%		D3BP95              	100.00%
Bootstrap support for H2XYG3 as seed ortholog is 100%.
Bootstrap support for D3BP95 as seed ortholog is 100%.

Group of orthologs #1740. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.pallidum:112

F6UMP0              	100.00%		D3B5X9              	100.00%
Bootstrap support for F6UMP0 as seed ortholog is 100%.
Bootstrap support for D3B5X9 as seed ortholog is 100%.

Group of orthologs #1741. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.pallidum:67

F6YVQ1              	100.00%		D3B0J7              	100.00%
Bootstrap support for F6YVQ1 as seed ortholog is 100%.
Bootstrap support for D3B0J7 as seed ortholog is 99%.

Group of orthologs #1742. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.pallidum:112

F6RRL3              	100.00%		D3BRR6              	100.00%
Bootstrap support for F6RRL3 as seed ortholog is 100%.
Bootstrap support for D3BRR6 as seed ortholog is 100%.

Group of orthologs #1743. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 P.pallidum:112

H2XXQ7              	100.00%		D3BB52              	100.00%
Bootstrap support for H2XXQ7 as seed ortholog is 100%.
Bootstrap support for D3BB52 as seed ortholog is 100%.

Group of orthologs #1744. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.pallidum:112

H2Y396              	100.00%		D3BSW9              	100.00%
Bootstrap support for H2Y396 as seed ortholog is 99%.
Bootstrap support for D3BSW9 as seed ortholog is 100%.

Group of orthologs #1745. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.pallidum:111

F6WG20              	100.00%		D3B835              	100.00%
                    	       		D3BDT5              	16.63%
Bootstrap support for F6WG20 as seed ortholog is 100%.
Bootstrap support for D3B835 as seed ortholog is 100%.

Group of orthologs #1746. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.pallidum:111

F6PQW9              	100.00%		D3BIR9              	100.00%
Bootstrap support for F6PQW9 as seed ortholog is 77%.
Bootstrap support for D3BIR9 as seed ortholog is 100%.

Group of orthologs #1747. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.pallidum:111

F6UG66              	100.00%		D3BIL1              	100.00%
Bootstrap support for F6UG66 as seed ortholog is 100%.
Bootstrap support for D3BIL1 as seed ortholog is 100%.

Group of orthologs #1748. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.pallidum:111

F6V9Z4              	100.00%		D3BIE0              	100.00%
Bootstrap support for F6V9Z4 as seed ortholog is 100%.
Bootstrap support for D3BIE0 as seed ortholog is 100%.

Group of orthologs #1749. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.pallidum:111

F7B9T1              	100.00%		D3B957              	100.00%
Bootstrap support for F7B9T1 as seed ortholog is 100%.
Bootstrap support for D3B957 as seed ortholog is 100%.

Group of orthologs #1750. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 P.pallidum:111

Q1RL40              	100.00%		D3BER1              	100.00%
Bootstrap support for Q1RL40 as seed ortholog is 100%.
Bootstrap support for D3BER1 as seed ortholog is 100%.

Group of orthologs #1751. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.pallidum:110

F7AKQ9              	100.00%		D3AWZ4              	100.00%
F6U0A7              	15.89%		D3BVM7              	14.31%
                    	       		D3BVM8              	12.81%
Bootstrap support for F7AKQ9 as seed ortholog is 100%.
Bootstrap support for D3AWZ4 as seed ortholog is 100%.

Group of orthologs #1752. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.pallidum:110

F6V0W8              	100.00%		D3B477              	100.00%
F6Z1D9              	10.00%		
Bootstrap support for F6V0W8 as seed ortholog is 100%.
Bootstrap support for D3B477 as seed ortholog is 100%.

Group of orthologs #1753. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.pallidum:110

F6R1Q7              	100.00%		D3B1G8              	100.00%
Bootstrap support for F6R1Q7 as seed ortholog is 100%.
Bootstrap support for D3B1G8 as seed ortholog is 100%.

Group of orthologs #1754. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.pallidum:110

F6T8A4              	100.00%		D3BKG6              	100.00%
Bootstrap support for F6T8A4 as seed ortholog is 100%.
Bootstrap support for D3BKG6 as seed ortholog is 100%.

Group of orthologs #1755. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.pallidum:110

F6ZZC3              	100.00%		D3BCR3              	100.00%
Bootstrap support for F6ZZC3 as seed ortholog is 100%.
Bootstrap support for D3BCR3 as seed ortholog is 100%.

Group of orthologs #1756. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.pallidum:110

F6VSM2              	100.00%		D3BP66              	100.00%
Bootstrap support for F6VSM2 as seed ortholog is 100%.
Bootstrap support for D3BP66 as seed ortholog is 100%.

Group of orthologs #1757. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 P.pallidum:110

H2XPJ6              	100.00%		D3BU38              	100.00%
Bootstrap support for H2XPJ6 as seed ortholog is 100%.
Bootstrap support for D3BU38 as seed ortholog is 100%.

Group of orthologs #1758. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.pallidum:109

F7B0D1              	100.00%		D3AW17              	100.00%
F6UAD5              	55.47%		
Bootstrap support for F7B0D1 as seed ortholog is 100%.
Bootstrap support for D3AW17 as seed ortholog is 100%.

Group of orthologs #1759. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.pallidum:109

F6UW27              	100.00%		D3BF45              	100.00%
Bootstrap support for F6UW27 as seed ortholog is 100%.
Bootstrap support for D3BF45 as seed ortholog is 100%.

Group of orthologs #1760. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.pallidum:109

F6Y321              	100.00%		D3BB02              	100.00%
Bootstrap support for F6Y321 as seed ortholog is 100%.
Bootstrap support for D3BB02 as seed ortholog is 100%.

Group of orthologs #1761. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.pallidum:109

H2XL53              	100.00%		D3B6L7              	100.00%
Bootstrap support for H2XL53 as seed ortholog is 100%.
Bootstrap support for D3B6L7 as seed ortholog is 100%.

Group of orthologs #1762. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.pallidum:109

H2XQJ8              	100.00%		D3B2N6              	100.00%
Bootstrap support for H2XQJ8 as seed ortholog is 100%.
Bootstrap support for D3B2N6 as seed ortholog is 100%.

Group of orthologs #1763. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.pallidum:109

H2XLK9              	100.00%		D3BR33              	100.00%
Bootstrap support for H2XLK9 as seed ortholog is 100%.
Bootstrap support for D3BR33 as seed ortholog is 100%.

Group of orthologs #1764. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.pallidum:109

F7BEP5              	100.00%		D3BVQ9              	100.00%
Bootstrap support for F7BEP5 as seed ortholog is 100%.
Bootstrap support for D3BVQ9 as seed ortholog is 100%.

Group of orthologs #1765. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 P.pallidum:109

H2XW33              	100.00%		D3BKF8              	100.00%
Bootstrap support for H2XW33 as seed ortholog is 100%.
Bootstrap support for D3BKF8 as seed ortholog is 100%.

Group of orthologs #1766. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.pallidum:108

H2XY34              	100.00%		D3B0Q7              	100.00%
F6X9C7              	38.14%		
H2XPK9              	31.02%		
F6Y7T8              	21.19%		
Bootstrap support for H2XY34 as seed ortholog is 100%.
Bootstrap support for D3B0Q7 as seed ortholog is 100%.

Group of orthologs #1767. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.pallidum:29

F6X139              	100.00%		D3BGK0              	100.00%
F6X7G6              	20.58%		
Bootstrap support for F6X139 as seed ortholog is 100%.
Bootstrap support for D3BGK0 as seed ortholog is 81%.

Group of orthologs #1768. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.pallidum:108

F6QTI2              	100.00%		D3B7B3              	100.00%
Bootstrap support for F6QTI2 as seed ortholog is 100%.
Bootstrap support for D3B7B3 as seed ortholog is 100%.

Group of orthologs #1769. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.pallidum:108

F6T3V6              	100.00%		D3B900              	100.00%
Bootstrap support for F6T3V6 as seed ortholog is 100%.
Bootstrap support for D3B900 as seed ortholog is 100%.

Group of orthologs #1770. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 P.pallidum:17

F6Z188              	100.00%		D3AXI6              	100.00%
Bootstrap support for F6Z188 as seed ortholog is 80%.
Bootstrap support for D3AXI6 as seed ortholog is 65%.
Alternative seed ortholog is D3AWM8 (17 bits away from this cluster)

Group of orthologs #1771. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.pallidum:108

F6Y4R6              	100.00%		D3B5W0              	100.00%
Bootstrap support for F6Y4R6 as seed ortholog is 100%.
Bootstrap support for D3B5W0 as seed ortholog is 100%.

Group of orthologs #1772. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.pallidum:108

F7AE51              	100.00%		D3B3V2              	100.00%
Bootstrap support for F7AE51 as seed ortholog is 100%.
Bootstrap support for D3B3V2 as seed ortholog is 100%.

Group of orthologs #1773. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.pallidum:108

F6RXS5              	100.00%		D3BPQ3              	100.00%
Bootstrap support for F6RXS5 as seed ortholog is 100%.
Bootstrap support for D3BPQ3 as seed ortholog is 100%.

Group of orthologs #1774. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:108

F6SPH4              	100.00%		D3BQP7              	100.00%
Bootstrap support for F6SPH4 as seed ortholog is 99%.
Bootstrap support for D3BQP7 as seed ortholog is 100%.

Group of orthologs #1775. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:108

F7AF59              	100.00%		D3BCL9              	100.00%
Bootstrap support for F7AF59 as seed ortholog is 98%.
Bootstrap support for D3BCL9 as seed ortholog is 100%.

Group of orthologs #1776. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.pallidum:108

Q1RL41              	100.00%		D3B9E4              	100.00%
Bootstrap support for Q1RL41 as seed ortholog is 100%.
Bootstrap support for D3B9E4 as seed ortholog is 100%.

Group of orthologs #1777. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 P.pallidum:108

H2XUU8              	100.00%		D3BJG7              	100.00%
Bootstrap support for H2XUU8 as seed ortholog is 100%.
Bootstrap support for D3BJG7 as seed ortholog is 100%.

Group of orthologs #1778. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.pallidum:31

H2XPW5              	100.00%		D3BHG9              	100.00%
F6Z5V2              	12.98%		
Bootstrap support for H2XPW5 as seed ortholog is 100%.
Bootstrap support for D3BHG9 as seed ortholog is 80%.

Group of orthologs #1779. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 P.pallidum:107

H2XQ42              	100.00%		D3BJ21              	100.00%
H2Y0K9              	12.97%		
Bootstrap support for H2XQ42 as seed ortholog is 80%.
Bootstrap support for D3BJ21 as seed ortholog is 100%.

Group of orthologs #1780. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.pallidum:107

F6Q6C3              	100.00%		D3BJ97              	100.00%
Bootstrap support for F6Q6C3 as seed ortholog is 100%.
Bootstrap support for D3BJ97 as seed ortholog is 100%.

Group of orthologs #1781. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.pallidum:107

F6VPU4              	100.00%		D3BPW7              	100.00%
Bootstrap support for F6VPU4 as seed ortholog is 100%.
Bootstrap support for D3BPW7 as seed ortholog is 100%.

Group of orthologs #1782. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.pallidum:107

H2XS17              	100.00%		D3B5T6              	100.00%
Bootstrap support for H2XS17 as seed ortholog is 100%.
Bootstrap support for D3B5T6 as seed ortholog is 100%.

Group of orthologs #1783. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 P.pallidum:107

F7BMN7              	100.00%		D3BPE9              	100.00%
Bootstrap support for F7BMN7 as seed ortholog is 100%.
Bootstrap support for D3BPE9 as seed ortholog is 100%.

Group of orthologs #1784. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 P.pallidum:4

F6TXI5              	100.00%		D3B9I0              	100.00%
F7BDP7              	21.49%		D3B630              	5.80%
F6VXK0              	20.60%		
F6XKL3              	20.00%		
L7N0R4              	17.31%		
F6XKJ1              	16.12%		
F7B9X1              	15.52%		
H2XUP4              	13.13%		
Bootstrap support for F6TXI5 as seed ortholog is 53%.
Alternative seed ortholog is F6V879 (3 bits away from this cluster)
Bootstrap support for D3B9I0 as seed ortholog is 56%.
Alternative seed ortholog is D3B9L8 (4 bits away from this cluster)

Group of orthologs #1785. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.pallidum:35

F6Y3T4              	100.00%		D3BFK9              	100.00%
F6Y3U3              	27.76%		D3BSZ3              	42.16%
Bootstrap support for F6Y3T4 as seed ortholog is 100%.
Bootstrap support for D3BFK9 as seed ortholog is 96%.

Group of orthologs #1786. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.pallidum:106

F6XEX3              	100.00%		D3B2R6              	100.00%
F6XEW4              	40.04%		
Bootstrap support for F6XEX3 as seed ortholog is 100%.
Bootstrap support for D3B2R6 as seed ortholog is 100%.

Group of orthologs #1787. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.pallidum:106

F7A3S4              	100.00%		D3BL22              	100.00%
F6YQI1              	63.28%		
Bootstrap support for F7A3S4 as seed ortholog is 100%.
Bootstrap support for D3BL22 as seed ortholog is 100%.

Group of orthologs #1788. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.pallidum:106

F6SAD5              	100.00%		D3B7G3              	100.00%
Bootstrap support for F6SAD5 as seed ortholog is 100%.
Bootstrap support for D3B7G3 as seed ortholog is 100%.

Group of orthologs #1789. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.pallidum:21

F6S146              	100.00%		D3BDR6              	100.00%
Bootstrap support for F6S146 as seed ortholog is 100%.
Bootstrap support for D3BDR6 as seed ortholog is 48%.
Alternative seed ortholog is D3B6G5 (21 bits away from this cluster)

Group of orthologs #1790. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.pallidum:106

F6VIZ2              	100.00%		D3BFH4              	100.00%
Bootstrap support for F6VIZ2 as seed ortholog is 100%.
Bootstrap support for D3BFH4 as seed ortholog is 100%.

Group of orthologs #1791. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.pallidum:106

F6WEC1              	100.00%		D3BGG5              	100.00%
Bootstrap support for F6WEC1 as seed ortholog is 100%.
Bootstrap support for D3BGG5 as seed ortholog is 100%.

Group of orthologs #1792. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.pallidum:106

H2XPU1              	100.00%		D3AZQ9              	100.00%
Bootstrap support for H2XPU1 as seed ortholog is 100%.
Bootstrap support for D3AZQ9 as seed ortholog is 100%.

Group of orthologs #1793. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.pallidum:106

F6S9I2              	100.00%		D3BTN8              	100.00%
Bootstrap support for F6S9I2 as seed ortholog is 89%.
Bootstrap support for D3BTN8 as seed ortholog is 100%.

Group of orthologs #1794. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.pallidum:106

F6WQS5              	100.00%		D3BJE2              	100.00%
Bootstrap support for F6WQS5 as seed ortholog is 100%.
Bootstrap support for D3BJE2 as seed ortholog is 100%.

Group of orthologs #1795. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.pallidum:106

H2XY20              	100.00%		D3B1V3              	100.00%
Bootstrap support for H2XY20 as seed ortholog is 100%.
Bootstrap support for D3B1V3 as seed ortholog is 100%.

Group of orthologs #1796. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.pallidum:106

H2XNI6              	100.00%		D3BHF0              	100.00%
Bootstrap support for H2XNI6 as seed ortholog is 100%.
Bootstrap support for D3BHF0 as seed ortholog is 100%.

Group of orthologs #1797. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.pallidum:106

H2XKS6              	100.00%		D3BUG2              	100.00%
Bootstrap support for H2XKS6 as seed ortholog is 100%.
Bootstrap support for D3BUG2 as seed ortholog is 100%.

Group of orthologs #1798. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.pallidum:7

H2XPV2              	100.00%		D3BVN4              	100.00%
Bootstrap support for H2XPV2 as seed ortholog is 100%.
Bootstrap support for D3BVN4 as seed ortholog is 50%.
Alternative seed ortholog is D3BL15 (7 bits away from this cluster)

Group of orthologs #1799. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 P.pallidum:106

H2XYU8              	100.00%		D3BN13              	100.00%
Bootstrap support for H2XYU8 as seed ortholog is 100%.
Bootstrap support for D3BN13 as seed ortholog is 100%.

Group of orthologs #1800. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.pallidum:105

H2XKG0              	100.00%		D3BU12              	100.00%
H2Y3K6              	28.94%		
H2Y1F0              	28.27%		
F6PND8              	27.27%		
H2XS65              	14.30%		
F6SVU6              	13.53%		
L7N0U5              	10.98%		
F6VTQ0              	10.86%		
F6ULA0              	9.31%		
F6Q966              	7.76%		
Bootstrap support for H2XKG0 as seed ortholog is 100%.
Bootstrap support for D3BU12 as seed ortholog is 100%.

Group of orthologs #1801. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.pallidum:105

F6WWX5              	100.00%		D3BCD4              	100.00%
Bootstrap support for F6WWX5 as seed ortholog is 100%.
Bootstrap support for D3BCD4 as seed ortholog is 100%.

Group of orthologs #1802. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.pallidum:105

F6SV73              	100.00%		D3BLD3              	100.00%
Bootstrap support for F6SV73 as seed ortholog is 100%.
Bootstrap support for D3BLD3 as seed ortholog is 100%.

Group of orthologs #1803. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 P.pallidum:105

F7ANZ8              	100.00%		D3BCM4              	100.00%
Bootstrap support for F7ANZ8 as seed ortholog is 100%.
Bootstrap support for D3BCM4 as seed ortholog is 100%.

Group of orthologs #1804. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.pallidum:34

H2XY86              	100.00%		D3B7E8              	100.00%
H2XXC3              	8.89%		
H2XKL0              	7.27%		
Bootstrap support for H2XY86 as seed ortholog is 100%.
Bootstrap support for D3B7E8 as seed ortholog is 97%.

Group of orthologs #1805. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.pallidum:104

F6V6N1              	100.00%		D3AZC5              	100.00%
Bootstrap support for F6V6N1 as seed ortholog is 100%.
Bootstrap support for D3AZC5 as seed ortholog is 100%.

Group of orthologs #1806. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.pallidum:104

F6XR12              	100.00%		D3AXK2              	100.00%
Bootstrap support for F6XR12 as seed ortholog is 100%.
Bootstrap support for D3AXK2 as seed ortholog is 100%.

Group of orthologs #1807. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 P.pallidum:43

F6V3K9              	100.00%		D3B3S3              	100.00%
Bootstrap support for F6V3K9 as seed ortholog is 45%.
Alternative seed ortholog is F6UBS8 (4 bits away from this cluster)
Bootstrap support for D3B3S3 as seed ortholog is 80%.

Group of orthologs #1808. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.pallidum:104

F6R725              	100.00%		D3BEI5              	100.00%
Bootstrap support for F6R725 as seed ortholog is 100%.
Bootstrap support for D3BEI5 as seed ortholog is 100%.

Group of orthologs #1809. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.pallidum:104

F7B7U2              	100.00%		D3B9D3              	100.00%
Bootstrap support for F7B7U2 as seed ortholog is 100%.
Bootstrap support for D3B9D3 as seed ortholog is 100%.

Group of orthologs #1810. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.pallidum:104

H2XYQ2              	100.00%		D3B823              	100.00%
Bootstrap support for H2XYQ2 as seed ortholog is 100%.
Bootstrap support for D3B823 as seed ortholog is 100%.

Group of orthologs #1811. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 P.pallidum:104

H2XYR7              	100.00%		D3BL70              	100.00%
Bootstrap support for H2XYR7 as seed ortholog is 100%.
Bootstrap support for D3BL70 as seed ortholog is 100%.

Group of orthologs #1812. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.pallidum:103

F7AG13              	100.00%		D3BSN7              	100.00%
                    	       		D3BCB1              	21.74%
Bootstrap support for F7AG13 as seed ortholog is 100%.
Bootstrap support for D3BSN7 as seed ortholog is 100%.

Group of orthologs #1813. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.pallidum:103

F6TBE2              	100.00%		D3B3A9              	100.00%
Bootstrap support for F6TBE2 as seed ortholog is 100%.
Bootstrap support for D3B3A9 as seed ortholog is 100%.

Group of orthologs #1814. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.pallidum:103

F6RR57              	100.00%		D3BM61              	100.00%
Bootstrap support for F6RR57 as seed ortholog is 100%.
Bootstrap support for D3BM61 as seed ortholog is 100%.

Group of orthologs #1815. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.pallidum:103

H2XPT5              	100.00%		D3B7Q5              	100.00%
Bootstrap support for H2XPT5 as seed ortholog is 100%.
Bootstrap support for D3B7Q5 as seed ortholog is 100%.

Group of orthologs #1816. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.pallidum:103

F7AT36              	100.00%		D3BU06              	100.00%
Bootstrap support for F7AT36 as seed ortholog is 100%.
Bootstrap support for D3BU06 as seed ortholog is 100%.

Group of orthologs #1817. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 P.pallidum:103

H2XXU4              	100.00%		D3BMB4              	100.00%
Bootstrap support for H2XXU4 as seed ortholog is 100%.
Bootstrap support for D3BMB4 as seed ortholog is 100%.

Group of orthologs #1818. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 P.pallidum:4

F7AZ83              	100.00%		D3B867              	100.00%
F6UN86              	13.22%		D3AVW1              	11.48%
F6QQF5              	8.59%		D3AYU2              	6.89%
F6QDT9              	6.85%		
Bootstrap support for F7AZ83 as seed ortholog is 64%.
Alternative seed ortholog is Q9NL43 (13 bits away from this cluster)
Bootstrap support for D3B867 as seed ortholog is 54%.
Alternative seed ortholog is D3AYR5 (4 bits away from this cluster)

Group of orthologs #1819. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.pallidum:102

F6VLH4              	100.00%		D3AXU0              	100.00%
Bootstrap support for F6VLH4 as seed ortholog is 100%.
Bootstrap support for D3AXU0 as seed ortholog is 100%.

Group of orthologs #1820. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.pallidum:15

F6ZAX4              	100.00%		D3AWB1              	100.00%
Bootstrap support for F6ZAX4 as seed ortholog is 100%.
Bootstrap support for D3AWB1 as seed ortholog is 63%.
Alternative seed ortholog is D3B3F2 (15 bits away from this cluster)

Group of orthologs #1821. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.pallidum:102

F6TJA4              	100.00%		D3BFL2              	100.00%
Bootstrap support for F6TJA4 as seed ortholog is 100%.
Bootstrap support for D3BFL2 as seed ortholog is 100%.

Group of orthologs #1822. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.pallidum:102

F6V9L7              	100.00%		D3BHE8              	100.00%
Bootstrap support for F6V9L7 as seed ortholog is 100%.
Bootstrap support for D3BHE8 as seed ortholog is 100%.

Group of orthologs #1823. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.pallidum:102

F6WFW0              	100.00%		D3BH66              	100.00%
Bootstrap support for F6WFW0 as seed ortholog is 100%.
Bootstrap support for D3BH66 as seed ortholog is 100%.

Group of orthologs #1824. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.pallidum:102

F7AWW1              	100.00%		D3BC06              	100.00%
Bootstrap support for F7AWW1 as seed ortholog is 100%.
Bootstrap support for D3BC06 as seed ortholog is 100%.

Group of orthologs #1825. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.pallidum:102

H2XWF9              	100.00%		D3B291              	100.00%
Bootstrap support for H2XWF9 as seed ortholog is 100%.
Bootstrap support for D3B291 as seed ortholog is 100%.

Group of orthologs #1826. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.pallidum:102

Q8I7D9              	100.00%		D3B351              	100.00%
Bootstrap support for Q8I7D9 as seed ortholog is 100%.
Bootstrap support for D3B351 as seed ortholog is 100%.

Group of orthologs #1827. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 P.pallidum:102

F7BFG7              	100.00%		D3BTD8              	100.00%
Bootstrap support for F7BFG7 as seed ortholog is 100%.
Bootstrap support for D3BTD8 as seed ortholog is 100%.

Group of orthologs #1828. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.pallidum:101

F6SJ97              	100.00%		D3BCY1              	100.00%
F6W615              	57.83%		D3BCY9              	38.62%
H2Y2E0              	47.95%		
H2Y1A4              	45.30%		
H2XN03              	41.69%		
F6ZSL9              	19.04%		
F6UKM1              	10.36%		
Bootstrap support for F6SJ97 as seed ortholog is 100%.
Bootstrap support for D3BCY1 as seed ortholog is 100%.

Group of orthologs #1829. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 P.pallidum:101

F7AI19              	100.00%		D3B5E1              	100.00%
F6X4I5              	14.93%		
F6ZCT8              	13.08%		
F6SPI7              	9.11%		
F7A801              	8.72%		
Bootstrap support for F7AI19 as seed ortholog is 78%.
Bootstrap support for D3B5E1 as seed ortholog is 100%.

Group of orthologs #1830. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.pallidum:101

H2XRU3              	100.00%		D3B1A3              	100.00%
Bootstrap support for H2XRU3 as seed ortholog is 100%.
Bootstrap support for D3B1A3 as seed ortholog is 100%.

Group of orthologs #1831. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.pallidum:101

F6ZGV0              	100.00%		D3BL61              	100.00%
Bootstrap support for F6ZGV0 as seed ortholog is 100%.
Bootstrap support for D3BL61 as seed ortholog is 100%.

Group of orthologs #1832. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 P.pallidum:101

Q1RPU6              	100.00%		D3BBD7              	100.00%
Bootstrap support for Q1RPU6 as seed ortholog is 100%.
Bootstrap support for D3BBD7 as seed ortholog is 100%.

Group of orthologs #1833. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 P.pallidum:6

H2XX49              	100.00%		D3B556              	100.00%
                    	       		D3BTW1              	16.30%
Bootstrap support for H2XX49 as seed ortholog is 59%.
Alternative seed ortholog is F6TR45 (8 bits away from this cluster)
Bootstrap support for D3B556 as seed ortholog is 55%.
Alternative seed ortholog is D3BQH6 (6 bits away from this cluster)

Group of orthologs #1834. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.pallidum:100

F6XT02              	100.00%		D3B9L6              	100.00%
Bootstrap support for F6XT02 as seed ortholog is 100%.
Bootstrap support for D3B9L6 as seed ortholog is 100%.

Group of orthologs #1835. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 P.pallidum:37

F6VN74              	100.00%		D3BR31              	100.00%
Bootstrap support for F6VN74 as seed ortholog is 100%.
Bootstrap support for D3BR31 as seed ortholog is 92%.

Group of orthologs #1836. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 P.pallidum:100

H2Y2E7              	100.00%		D3BCC3              	100.00%
Bootstrap support for H2Y2E7 as seed ortholog is 77%.
Bootstrap support for D3BCC3 as seed ortholog is 100%.

Group of orthologs #1837. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.pallidum:99

F6XNX8              	100.00%		D3B2C3              	100.00%
Bootstrap support for F6XNX8 as seed ortholog is 100%.
Bootstrap support for D3B2C3 as seed ortholog is 100%.

Group of orthologs #1838. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.pallidum:99

F6UE24              	100.00%		D3B9S7              	100.00%
Bootstrap support for F6UE24 as seed ortholog is 100%.
Bootstrap support for D3B9S7 as seed ortholog is 100%.

Group of orthologs #1839. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.pallidum:99

F6VYS2              	100.00%		D3BB08              	100.00%
Bootstrap support for F6VYS2 as seed ortholog is 100%.
Bootstrap support for D3BB08 as seed ortholog is 100%.

Group of orthologs #1840. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.pallidum:99

F6ZI65              	100.00%		D3B2U1              	100.00%
Bootstrap support for F6ZI65 as seed ortholog is 100%.
Bootstrap support for D3B2U1 as seed ortholog is 100%.

Group of orthologs #1841. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.pallidum:99

F7AF81              	100.00%		D3B117              	100.00%
Bootstrap support for F7AF81 as seed ortholog is 100%.
Bootstrap support for D3B117 as seed ortholog is 100%.

Group of orthologs #1842. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.pallidum:99

F6UEE4              	100.00%		D3BUA1              	100.00%
Bootstrap support for F6UEE4 as seed ortholog is 100%.
Bootstrap support for D3BUA1 as seed ortholog is 100%.

Group of orthologs #1843. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.pallidum:99

H2Y2G2              	100.00%		D3B3I7              	100.00%
Bootstrap support for H2Y2G2 as seed ortholog is 100%.
Bootstrap support for D3B3I7 as seed ortholog is 100%.

Group of orthologs #1844. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.pallidum:99

H2XY72              	100.00%		D3B8I6              	100.00%
Bootstrap support for H2XY72 as seed ortholog is 100%.
Bootstrap support for D3B8I6 as seed ortholog is 100%.

Group of orthologs #1845. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.pallidum:99

H2Y219              	100.00%		D3BC93              	100.00%
Bootstrap support for H2Y219 as seed ortholog is 100%.
Bootstrap support for D3BC93 as seed ortholog is 100%.

Group of orthologs #1846. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 P.pallidum:99

H2XXI7              	100.00%		D3BQ25              	100.00%
Bootstrap support for H2XXI7 as seed ortholog is 100%.
Bootstrap support for D3BQ25 as seed ortholog is 100%.

Group of orthologs #1847. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.pallidum:98

F6TSN4              	100.00%		D3BV17              	100.00%
                    	       		D3AWV8              	9.89%
                    	       		D3BP79              	7.38%
Bootstrap support for F6TSN4 as seed ortholog is 100%.
Bootstrap support for D3BV17 as seed ortholog is 100%.

Group of orthologs #1848. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.pallidum:98

F6T4U7              	100.00%		D3BBB0              	100.00%
F6ZUV3              	30.29%		
Bootstrap support for F6T4U7 as seed ortholog is 100%.
Bootstrap support for D3BBB0 as seed ortholog is 100%.

Group of orthologs #1849. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 P.pallidum:98

F6W2C6              	100.00%		D3AXT2              	100.00%
Bootstrap support for F6W2C6 as seed ortholog is 54%.
Alternative seed ortholog is F7A3V9 (10 bits away from this cluster)
Bootstrap support for D3AXT2 as seed ortholog is 100%.

Group of orthologs #1850. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.pallidum:98

F6VXB1              	100.00%		D3B854              	100.00%
Bootstrap support for F6VXB1 as seed ortholog is 100%.
Bootstrap support for D3B854 as seed ortholog is 100%.

Group of orthologs #1851. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 P.pallidum:5

F6Y4L7              	100.00%		D3BKU0              	100.00%
Bootstrap support for F6Y4L7 as seed ortholog is 100%.
Bootstrap support for D3BKU0 as seed ortholog is 81%.

Group of orthologs #1852. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 P.pallidum:97

F6TV83              	100.00%		D3BL69              	100.00%
F6SFE9              	13.33%		D3B103              	9.77%
                    	       		D3BJS3              	5.55%
                    	       		D3BKK8              	5.17%
Bootstrap support for F6TV83 as seed ortholog is 56%.
Alternative seed ortholog is F6U3T3 (3 bits away from this cluster)
Bootstrap support for D3BL69 as seed ortholog is 100%.

Group of orthologs #1853. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.pallidum:97

F6R035              	100.00%		D3B5L5              	100.00%
Bootstrap support for F6R035 as seed ortholog is 100%.
Bootstrap support for D3B5L5 as seed ortholog is 100%.

Group of orthologs #1854. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 P.pallidum:35

F6PMJ3              	100.00%		D3BC72              	100.00%
Bootstrap support for F6PMJ3 as seed ortholog is 53%.
Alternative seed ortholog is F6YNR7 (3 bits away from this cluster)
Bootstrap support for D3BC72 as seed ortholog is 94%.

Group of orthologs #1855. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.pallidum:97

F6XCL4              	100.00%		D3AZW0              	100.00%
Bootstrap support for F6XCL4 as seed ortholog is 100%.
Bootstrap support for D3AZW0 as seed ortholog is 100%.

Group of orthologs #1856. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.pallidum:97

F6QGB8              	100.00%		D3BEF4              	100.00%
Bootstrap support for F6QGB8 as seed ortholog is 100%.
Bootstrap support for D3BEF4 as seed ortholog is 100%.

Group of orthologs #1857. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.pallidum:97

F6YW80              	100.00%		D3B1Z5              	100.00%
Bootstrap support for F6YW80 as seed ortholog is 100%.
Bootstrap support for D3B1Z5 as seed ortholog is 100%.

Group of orthologs #1858. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.pallidum:97

F6QBE1              	100.00%		D3BKU9              	100.00%
Bootstrap support for F6QBE1 as seed ortholog is 100%.
Bootstrap support for D3BKU9 as seed ortholog is 100%.

Group of orthologs #1859. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.pallidum:97

F6QSD6              	100.00%		D3BKP1              	100.00%
Bootstrap support for F6QSD6 as seed ortholog is 100%.
Bootstrap support for D3BKP1 as seed ortholog is 100%.

Group of orthologs #1860. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.pallidum:97

F6YRL7              	100.00%		D3BAZ8              	100.00%
Bootstrap support for F6YRL7 as seed ortholog is 100%.
Bootstrap support for D3BAZ8 as seed ortholog is 100%.

Group of orthologs #1861. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.pallidum:97

F6YHE2              	100.00%		D3BF67              	100.00%
Bootstrap support for F6YHE2 as seed ortholog is 100%.
Bootstrap support for D3BF67 as seed ortholog is 100%.

Group of orthologs #1862. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.pallidum:97

F7AEJ9              	100.00%		D3BCV8              	100.00%
Bootstrap support for F7AEJ9 as seed ortholog is 100%.
Bootstrap support for D3BCV8 as seed ortholog is 100%.

Group of orthologs #1863. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 P.pallidum:97

F7B6D7              	100.00%		D3BFE0              	100.00%
Bootstrap support for F7B6D7 as seed ortholog is 100%.
Bootstrap support for D3BFE0 as seed ortholog is 100%.

Group of orthologs #1864. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:96

H2Y248              	100.00%		D3B9Z0              	100.00%
H2XN59              	100.00%		D3BPK3              	100.00%
F6XEI7              	100.00%		D3BHH8              	100.00%
H2Y0V5              	75.19%		
H2XVV6              	72.62%		
H2Y011              	68.38%		
F6UDE2              	52.75%		
F6TC09              	47.20%		
F6W505              	45.23%		
F6Q7J8              	45.08%		
F6SB61              	44.85%		
F7A8W7              	38.32%		
F6U9D6              	35.40%		
F7BB18              	31.44%		
F6QWY0              	30.41%		
F6TN66              	28.52%		
F6QWZ9              	28.18%		
Q6A1F0              	27.66%		
F6Q1R5              	25.60%		
F6ZT75              	25.60%		
F6T2T0              	24.74%		
F6RPT1              	24.50%		
F6W5Z3              	24.23%		
Q86NA9              	23.54%		
F6WMW7              	22.05%		
H2XY63              	22.05%		
H2XZA1              	21.31%		
F6VIX8              	20.62%		
F6UH52              	20.42%		
F6RQ77              	20.06%		
H2XVQ5              	18.56%		
F6T435              	18.22%		
H2XM68              	17.30%		
F6XQY6              	16.94%		
H2XK77              	15.64%		
F6YV26              	14.55%		
H2XV74              	14.40%		
H2XRW3              	13.17%		
Bootstrap support for H2Y248 as seed ortholog is 100%.
Bootstrap support for H2XN59 as seed ortholog is 100%.
Bootstrap support for F6XEI7 as seed ortholog is 100%.
Bootstrap support for D3B9Z0 as seed ortholog is 100%.
Bootstrap support for D3BPK3 as seed ortholog is 100%.
Bootstrap support for D3BHH8 as seed ortholog is 100%.

Group of orthologs #1865. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:19

F6V7C2              	100.00%		D3AXF3              	100.00%
                    	       		D3AZB2              	15.53%
                    	       		D3BB81              	9.33%
Bootstrap support for F6V7C2 as seed ortholog is 100%.
Bootstrap support for D3AXF3 as seed ortholog is 66%.
Alternative seed ortholog is D3B3V6 (19 bits away from this cluster)

Group of orthologs #1866. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 P.pallidum:96

H2XKE9              	100.00%		D3B370              	100.00%
                    	       		D3BF19              	5.85%
Bootstrap support for H2XKE9 as seed ortholog is 80%.
Bootstrap support for D3B370 as seed ortholog is 100%.

Group of orthologs #1867. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:96

F6PPI4              	100.00%		D3AYL6              	100.00%
Bootstrap support for F6PPI4 as seed ortholog is 100%.
Bootstrap support for D3AYL6 as seed ortholog is 100%.

Group of orthologs #1868. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:96

F6QKB5              	100.00%		D3BGG2              	100.00%
Bootstrap support for F6QKB5 as seed ortholog is 100%.
Bootstrap support for D3BGG2 as seed ortholog is 100%.

Group of orthologs #1869. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:96

F6RVB8              	100.00%		D3BI07              	100.00%
Bootstrap support for F6RVB8 as seed ortholog is 100%.
Bootstrap support for D3BI07 as seed ortholog is 100%.

Group of orthologs #1870. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:96

F6VKW3              	100.00%		D3BGG8              	100.00%
Bootstrap support for F6VKW3 as seed ortholog is 100%.
Bootstrap support for D3BGG8 as seed ortholog is 100%.

Group of orthologs #1871. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:96

F6Q4L9              	100.00%		D3BUX5              	100.00%
Bootstrap support for F6Q4L9 as seed ortholog is 100%.
Bootstrap support for D3BUX5 as seed ortholog is 100%.

Group of orthologs #1872. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:96

F6ZMJ7              	100.00%		D3BGE0              	100.00%
Bootstrap support for F6ZMJ7 as seed ortholog is 100%.
Bootstrap support for D3BGE0 as seed ortholog is 100%.

Group of orthologs #1873. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:96

F6WPK3              	100.00%		D3BV23              	100.00%
Bootstrap support for F6WPK3 as seed ortholog is 100%.
Bootstrap support for D3BV23 as seed ortholog is 100%.

Group of orthologs #1874. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:96

H2XR90              	100.00%		D3BAU2              	100.00%
Bootstrap support for H2XR90 as seed ortholog is 100%.
Bootstrap support for D3BAU2 as seed ortholog is 100%.

Group of orthologs #1875. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:96

F7BK44              	100.00%		D3BKE3              	100.00%
Bootstrap support for F7BK44 as seed ortholog is 100%.
Bootstrap support for D3BKE3 as seed ortholog is 100%.

Group of orthologs #1876. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:96

H2Y0D5              	100.00%		D3B538              	100.00%
Bootstrap support for H2Y0D5 as seed ortholog is 100%.
Bootstrap support for D3B538 as seed ortholog is 100%.

Group of orthologs #1877. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 P.pallidum:30

F6ZDT1              	100.00%		D3BRU0              	100.00%
Bootstrap support for F6ZDT1 as seed ortholog is 79%.
Bootstrap support for D3BRU0 as seed ortholog is 84%.

Group of orthologs #1878. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:96

F7AG76              	100.00%		D3BQY5              	100.00%
Bootstrap support for F7AG76 as seed ortholog is 100%.
Bootstrap support for D3BQY5 as seed ortholog is 100%.

Group of orthologs #1879. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 P.pallidum:96

H2XXM2              	100.00%		D3BAB7              	100.00%
Bootstrap support for H2XXM2 as seed ortholog is 64%.
Alternative seed ortholog is H2XR49 (15 bits away from this cluster)
Bootstrap support for D3BAB7 as seed ortholog is 100%.

Group of orthologs #1880. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:39

F7B012              	100.00%		D3BR70              	100.00%
Bootstrap support for F7B012 as seed ortholog is 100%.
Bootstrap support for D3BR70 as seed ortholog is 95%.

Group of orthologs #1881. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 P.pallidum:96

H2Y1H3              	100.00%		D3BJ79              	100.00%
Bootstrap support for H2Y1H3 as seed ortholog is 100%.
Bootstrap support for D3BJ79 as seed ortholog is 100%.

Group of orthologs #1882. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 P.pallidum:15

C4B8X2              	100.00%		D3BE07              	100.00%
Bootstrap support for C4B8X2 as seed ortholog is 100%.
Bootstrap support for D3BE07 as seed ortholog is 74%.
Alternative seed ortholog is D3BJU6 (15 bits away from this cluster)

Group of orthologs #1883. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 P.pallidum:95

F6WZJ4              	100.00%		D3B163              	100.00%
Bootstrap support for F6WZJ4 as seed ortholog is 100%.
Bootstrap support for D3B163 as seed ortholog is 100%.

Group of orthologs #1884. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 P.pallidum:95

F6ZXN3              	100.00%		D3B5I0              	100.00%
Bootstrap support for F6ZXN3 as seed ortholog is 100%.
Bootstrap support for D3B5I0 as seed ortholog is 100%.

Group of orthologs #1885. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 P.pallidum:95

F6YIB7              	100.00%		D3BH80              	100.00%
Bootstrap support for F6YIB7 as seed ortholog is 100%.
Bootstrap support for D3BH80 as seed ortholog is 100%.

Group of orthologs #1886. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 P.pallidum:95

F6X618              	100.00%		D3BL08              	100.00%
Bootstrap support for F6X618 as seed ortholog is 100%.
Bootstrap support for D3BL08 as seed ortholog is 100%.

Group of orthologs #1887. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 P.pallidum:95

F6YXW3              	100.00%		D3BSP7              	100.00%
Bootstrap support for F6YXW3 as seed ortholog is 100%.
Bootstrap support for D3BSP7 as seed ortholog is 100%.

Group of orthologs #1888. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.pallidum:94

F6R192              	100.00%		D3B8T0              	100.00%
Bootstrap support for F6R192 as seed ortholog is 100%.
Bootstrap support for D3B8T0 as seed ortholog is 100%.

Group of orthologs #1889. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.pallidum:94

F6SVM4              	100.00%		D3B6R0              	100.00%
Bootstrap support for F6SVM4 as seed ortholog is 100%.
Bootstrap support for D3B6R0 as seed ortholog is 100%.

Group of orthologs #1890. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.pallidum:33

F6SST4              	100.00%		D3B7X6              	100.00%
Bootstrap support for F6SST4 as seed ortholog is 100%.
Bootstrap support for D3B7X6 as seed ortholog is 98%.

Group of orthologs #1891. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.pallidum:19

F6WHB0              	100.00%		D3B0U5              	100.00%
Bootstrap support for F6WHB0 as seed ortholog is 100%.
Bootstrap support for D3B0U5 as seed ortholog is 88%.

Group of orthologs #1892. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 P.pallidum:94

F6PJW3              	100.00%		D3BFC5              	100.00%
Bootstrap support for F6PJW3 as seed ortholog is 90%.
Bootstrap support for D3BFC5 as seed ortholog is 100%.

Group of orthologs #1893. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.pallidum:45

F6XAL2              	100.00%		D3B016              	100.00%
Bootstrap support for F6XAL2 as seed ortholog is 100%.
Bootstrap support for D3B016 as seed ortholog is 95%.

Group of orthologs #1894. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.pallidum:94

F6ZVT2              	100.00%		D3BAV8              	100.00%
Bootstrap support for F6ZVT2 as seed ortholog is 100%.
Bootstrap support for D3BAV8 as seed ortholog is 100%.

Group of orthologs #1895. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.pallidum:94

F6ZBK7              	100.00%		D3BDF5              	100.00%
Bootstrap support for F6ZBK7 as seed ortholog is 100%.
Bootstrap support for D3BDF5 as seed ortholog is 100%.

Group of orthologs #1896. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.pallidum:94

F6WIH5              	100.00%		D3BQB1              	100.00%
Bootstrap support for F6WIH5 as seed ortholog is 100%.
Bootstrap support for D3BQB1 as seed ortholog is 100%.

Group of orthologs #1897. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 P.pallidum:94

H2Y184              	100.00%		D3AYP4              	100.00%
Bootstrap support for H2Y184 as seed ortholog is 100%.
Bootstrap support for D3AYP4 as seed ortholog is 100%.

Group of orthologs #1898. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 P.pallidum:94

Q1RL32              	100.00%		D3B455              	100.00%
Bootstrap support for Q1RL32 as seed ortholog is 70%.
Alternative seed ortholog is F7B7X5 (20 bits away from this cluster)
Bootstrap support for D3B455 as seed ortholog is 100%.

Group of orthologs #1899. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.pallidum:93

F6XI02              	100.00%		D3B651              	100.00%
Bootstrap support for F6XI02 as seed ortholog is 100%.
Bootstrap support for D3B651 as seed ortholog is 100%.

Group of orthologs #1900. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.pallidum:93

F6ZCY4              	100.00%		D3BTZ7              	100.00%
Bootstrap support for F6ZCY4 as seed ortholog is 100%.
Bootstrap support for D3BTZ7 as seed ortholog is 100%.

Group of orthologs #1901. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 P.pallidum:93

Q1RLF5              	100.00%		D3BKI7              	100.00%
Bootstrap support for Q1RLF5 as seed ortholog is 100%.
Bootstrap support for D3BKI7 as seed ortholog is 100%.

Group of orthologs #1902. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 P.pallidum:92

F6Z145              	100.00%		D3BFX1              	100.00%
F7B1Z2              	48.42%		
F6TNN9              	19.97%		
F6XGK4              	17.30%		
F7BA12              	17.14%		
F6QZW1              	12.81%		
H2Y0K5              	6.49%		
H2Y1H5              	5.82%		
Bootstrap support for F6Z145 as seed ortholog is 75%.
Bootstrap support for D3BFX1 as seed ortholog is 100%.

Group of orthologs #1903. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 P.pallidum:92

F6UEA0              	100.00%		D3B8N8              	100.00%
F6YZ62              	46.88%		D3BG57              	64.08%
F6Z103              	40.18%		D3BV73              	54.47%
Bootstrap support for F6UEA0 as seed ortholog is 72%.
Alternative seed ortholog is F6TKR9 (23 bits away from this cluster)
Bootstrap support for D3B8N8 as seed ortholog is 100%.

Group of orthologs #1904. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:21

F6T6E4              	100.00%		D3BV29              	100.00%
F6SM85              	5.02%		
Bootstrap support for F6T6E4 as seed ortholog is 100%.
Bootstrap support for D3BV29 as seed ortholog is 74%.
Alternative seed ortholog is D3BTS6 (21 bits away from this cluster)

Group of orthologs #1905. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:92

F6YTT5              	100.00%		D3BR15              	100.00%
H2XVF4              	10.49%		
Bootstrap support for F6YTT5 as seed ortholog is 100%.
Bootstrap support for D3BR15 as seed ortholog is 100%.

Group of orthologs #1906. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:1

F6RD78              	100.00%		D3BAK7              	100.00%
Bootstrap support for F6RD78 as seed ortholog is 100%.
Bootstrap support for D3BAK7 as seed ortholog is 53%.
Alternative seed ortholog is D3AWM8 (1 bits away from this cluster)

Group of orthologs #1907. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:92

F6R9S1              	100.00%		D3BBK6              	100.00%
Bootstrap support for F6R9S1 as seed ortholog is 100%.
Bootstrap support for D3BBK6 as seed ortholog is 100%.

Group of orthologs #1908. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:92

F6W1S6              	100.00%		D3B5L1              	100.00%
Bootstrap support for F6W1S6 as seed ortholog is 100%.
Bootstrap support for D3B5L1 as seed ortholog is 100%.

Group of orthologs #1909. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:92

F7B2I2              	100.00%		D3AWK0              	100.00%
Bootstrap support for F7B2I2 as seed ortholog is 100%.
Bootstrap support for D3AWK0 as seed ortholog is 100%.

Group of orthologs #1910. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:92

F6XZJ5              	100.00%		D3BJE0              	100.00%
Bootstrap support for F6XZJ5 as seed ortholog is 100%.
Bootstrap support for D3BJE0 as seed ortholog is 100%.

Group of orthologs #1911. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:92

F6V7G7              	100.00%		D3BUI8              	100.00%
Bootstrap support for F6V7G7 as seed ortholog is 100%.
Bootstrap support for D3BUI8 as seed ortholog is 100%.

Group of orthologs #1912. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:92

H2XKP6              	100.00%		D3BCT9              	100.00%
Bootstrap support for H2XKP6 as seed ortholog is 100%.
Bootstrap support for D3BCT9 as seed ortholog is 100%.

Group of orthologs #1913. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:92

H2Y2U3              	100.00%		D3AWC8              	100.00%
Bootstrap support for H2Y2U3 as seed ortholog is 100%.
Bootstrap support for D3AWC8 as seed ortholog is 100%.

Group of orthologs #1914. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 P.pallidum:92

H2XWE7              	100.00%		D3BUT5              	100.00%
Bootstrap support for H2XWE7 as seed ortholog is 100%.
Bootstrap support for D3BUT5 as seed ortholog is 100%.

Group of orthologs #1915. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 P.pallidum:91

F7BDX5              	100.00%		D3BFL6              	100.00%
F6VQ32              	100.00%		D3BMJ1              	100.00%
F6T5Q1              	100.00%		D3AYV2              	100.00%
F6X6U3              	55.80%		D3BBY4              	100.00%
F6RDW1              	25.57%		D3BKW9              	77.92%
                    	       		D3BKS3              	75.97%
                    	       		D3BMF7              	66.88%
                    	       		D3B9X4              	62.66%
                    	       		D3AYV3              	38.94%
                    	       		D3BFT4              	15.84%
                    	       		D3BSL8              	13.61%
Bootstrap support for F7BDX5 as seed ortholog is 88%.
Bootstrap support for F6VQ32 as seed ortholog is 81%.
Bootstrap support for F6T5Q1 as seed ortholog is 82%.
Bootstrap support for D3BFL6 as seed ortholog is 100%.
Bootstrap support for D3BMJ1 as seed ortholog is 100%.
Bootstrap support for D3AYV2 as seed ortholog is 100%.
Bootstrap support for D3BBY4 as seed ortholog is 100%.

Group of orthologs #1916. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.pallidum:91

H2XJI9              	100.00%		D3AXY2              	100.00%
                    	       		D3BE34              	13.72%
Bootstrap support for H2XJI9 as seed ortholog is 100%.
Bootstrap support for D3AXY2 as seed ortholog is 100%.

Group of orthologs #1917. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.pallidum:91

F6UXP7              	100.00%		D3B4H5              	100.00%
Bootstrap support for F6UXP7 as seed ortholog is 100%.
Bootstrap support for D3B4H5 as seed ortholog is 100%.

Group of orthologs #1918. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.pallidum:91

F6TV26              	100.00%		D3BU60              	100.00%
Bootstrap support for F6TV26 as seed ortholog is 100%.
Bootstrap support for D3BU60 as seed ortholog is 100%.

Group of orthologs #1919. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 P.pallidum:91

Q1RLB1              	100.00%		D3BCB7              	100.00%
Bootstrap support for Q1RLB1 as seed ortholog is 100%.
Bootstrap support for D3BCB7 as seed ortholog is 100%.

Group of orthologs #1920. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 P.pallidum:91

Q1RL82              	100.00%		D3BED0              	100.00%
Bootstrap support for Q1RL82 as seed ortholog is 97%.
Bootstrap support for D3BED0 as seed ortholog is 100%.

Group of orthologs #1921. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.pallidum:90

F6R384              	100.00%		D3B7W7              	100.00%
Bootstrap support for F6R384 as seed ortholog is 100%.
Bootstrap support for D3B7W7 as seed ortholog is 100%.

Group of orthologs #1922. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.pallidum:90

F6QR08              	100.00%		D3BF90              	100.00%
Bootstrap support for F6QR08 as seed ortholog is 100%.
Bootstrap support for D3BF90 as seed ortholog is 100%.

Group of orthologs #1923. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.pallidum:90

H2XK95              	100.00%		D3AVX9              	100.00%
Bootstrap support for H2XK95 as seed ortholog is 100%.
Bootstrap support for D3AVX9 as seed ortholog is 100%.

Group of orthologs #1924. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.pallidum:90

F6RMZ6              	100.00%		D3BN74              	100.00%
Bootstrap support for F6RMZ6 as seed ortholog is 100%.
Bootstrap support for D3BN74 as seed ortholog is 100%.

Group of orthologs #1925. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.pallidum:90

F7APY2              	100.00%		D3BBQ4              	100.00%
Bootstrap support for F7APY2 as seed ortholog is 100%.
Bootstrap support for D3BBQ4 as seed ortholog is 100%.

Group of orthologs #1926. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 P.pallidum:90

H2Y1B5              	100.00%		D3B4V8              	100.00%
Bootstrap support for H2Y1B5 as seed ortholog is 100%.
Bootstrap support for D3B4V8 as seed ortholog is 100%.

Group of orthologs #1927. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 P.pallidum:89

F6Y3D6              	100.00%		D3BPF4              	100.00%
F6QDM9              	59.83%		D3AZ39              	67.72%
F6QDM2              	27.98%		D3BUQ5              	65.61%
L7N0U1              	24.10%		D3BAJ2              	54.76%
Bootstrap support for F6Y3D6 as seed ortholog is 55%.
Alternative seed ortholog is F6V9K6 (5 bits away from this cluster)
Bootstrap support for D3BPF4 as seed ortholog is 100%.

Group of orthologs #1928. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.pallidum:89

F6TXQ6              	100.00%		D3AWU9              	100.00%
F6V198              	34.48%		
Bootstrap support for F6TXQ6 as seed ortholog is 100%.
Bootstrap support for D3AWU9 as seed ortholog is 100%.

Group of orthologs #1929. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.pallidum:89

F6TPM4              	100.00%		D3AXH2              	100.00%
Bootstrap support for F6TPM4 as seed ortholog is 100%.
Bootstrap support for D3AXH2 as seed ortholog is 100%.

Group of orthologs #1930. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.pallidum:89

F6ZS91              	100.00%		D3B3C9              	100.00%
Bootstrap support for F6ZS91 as seed ortholog is 100%.
Bootstrap support for D3B3C9 as seed ortholog is 100%.

Group of orthologs #1931. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.pallidum:11

F6RQ08              	100.00%		D3BUV9              	100.00%
Bootstrap support for F6RQ08 as seed ortholog is 100%.
Bootstrap support for D3BUV9 as seed ortholog is 56%.
Alternative seed ortholog is D3B6G5 (11 bits away from this cluster)

Group of orthologs #1932. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.pallidum:89

F7BHR3              	100.00%		D3BE05              	100.00%
Bootstrap support for F7BHR3 as seed ortholog is 100%.
Bootstrap support for D3BE05 as seed ortholog is 100%.

Group of orthologs #1933. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.pallidum:89

H2Y1I4              	100.00%		D3AY65              	100.00%
Bootstrap support for H2Y1I4 as seed ortholog is 100%.
Bootstrap support for D3AY65 as seed ortholog is 100%.

Group of orthologs #1934. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.pallidum:20

H2XR04              	100.00%		D3BHV2              	100.00%
Bootstrap support for H2XR04 as seed ortholog is 100%.
Bootstrap support for D3BHV2 as seed ortholog is 88%.

Group of orthologs #1935. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 P.pallidum:5

Q1RL49              	100.00%		D3BBZ0              	100.00%
Bootstrap support for Q1RL49 as seed ortholog is 100%.
Bootstrap support for D3BBZ0 as seed ortholog is 54%.
Alternative seed ortholog is D3AWP6 (5 bits away from this cluster)

Group of orthologs #1936. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.pallidum:88

F6WD89              	100.00%		D3AZ98              	100.00%
Q4H3F0              	47.12%		
Bootstrap support for F6WD89 as seed ortholog is 100%.
Bootstrap support for D3AZ98 as seed ortholog is 100%.

Group of orthologs #1937. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.pallidum:88

F6PWR0              	100.00%		D3B5U8              	100.00%
Bootstrap support for F6PWR0 as seed ortholog is 100%.
Bootstrap support for D3B5U8 as seed ortholog is 100%.

Group of orthologs #1938. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.pallidum:88

F6RXC5              	100.00%		D3B6E0              	100.00%
Bootstrap support for F6RXC5 as seed ortholog is 100%.
Bootstrap support for D3B6E0 as seed ortholog is 100%.

Group of orthologs #1939. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 P.pallidum:88

H2XTC8              	100.00%		D3AZX2              	100.00%
Bootstrap support for H2XTC8 as seed ortholog is 100%.
Bootstrap support for D3AZX2 as seed ortholog is 100%.

Group of orthologs #1940. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.pallidum:87

F6R107              	100.00%		D3BL05              	100.00%
F6Y7R5              	15.59%		D3BH26              	26.83%
Bootstrap support for F6R107 as seed ortholog is 100%.
Bootstrap support for D3BL05 as seed ortholog is 100%.

Group of orthologs #1941. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 P.pallidum:87

F6PM95              	100.00%		D3B3B3              	100.00%
Bootstrap support for F6PM95 as seed ortholog is 74%.
Alternative seed ortholog is F6WTM4 (28 bits away from this cluster)
Bootstrap support for D3B3B3 as seed ortholog is 100%.

Group of orthologs #1942. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.pallidum:87

F6QH68              	100.00%		D3BNA4              	100.00%
Bootstrap support for F6QH68 as seed ortholog is 100%.
Bootstrap support for D3BNA4 as seed ortholog is 100%.

Group of orthologs #1943. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.pallidum:87

H2XQR8              	100.00%		D3B8B6              	100.00%
Bootstrap support for H2XQR8 as seed ortholog is 100%.
Bootstrap support for D3B8B6 as seed ortholog is 100%.

Group of orthologs #1944. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.pallidum:87

H2Y152              	100.00%		D3B0I7              	100.00%
Bootstrap support for H2Y152 as seed ortholog is 100%.
Bootstrap support for D3B0I7 as seed ortholog is 100%.

Group of orthologs #1945. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 P.pallidum:38

F7B236              	100.00%		D3BP84              	100.00%
Bootstrap support for F7B236 as seed ortholog is 93%.
Bootstrap support for D3BP84 as seed ortholog is 97%.

Group of orthologs #1946. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 P.pallidum:87

F7A6C5              	100.00%		D3BSU1              	100.00%
Bootstrap support for F7A6C5 as seed ortholog is 100%.
Bootstrap support for D3BSU1 as seed ortholog is 100%.

Group of orthologs #1947. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.pallidum:39

F7BH23              	100.00%		D3BAA5              	100.00%
F6SJR0              	27.48%		
F6ZB26              	19.26%		
Bootstrap support for F7BH23 as seed ortholog is 100%.
Bootstrap support for D3BAA5 as seed ortholog is 94%.

Group of orthologs #1948. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.pallidum:17

F6ZZP5              	100.00%		D3B5K9              	100.00%
F7B8I8              	26.56%		
Bootstrap support for F6ZZP5 as seed ortholog is 100%.
Bootstrap support for D3B5K9 as seed ortholog is 75%.

Group of orthologs #1949. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.pallidum:86

F6Y1X1              	100.00%		D3B610              	100.00%
Bootstrap support for F6Y1X1 as seed ortholog is 100%.
Bootstrap support for D3B610 as seed ortholog is 100%.

Group of orthologs #1950. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 P.pallidum:6

F6TVM0              	100.00%		D3BKD3              	100.00%
Bootstrap support for F6TVM0 as seed ortholog is 76%.
Bootstrap support for D3BKD3 as seed ortholog is 56%.
Alternative seed ortholog is D3BRR5 (6 bits away from this cluster)

Group of orthologs #1951. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 P.pallidum:86

H2XR06              	100.00%		D3B410              	100.00%
Bootstrap support for H2XR06 as seed ortholog is 72%.
Alternative seed ortholog is F6W0T2 (15 bits away from this cluster)
Bootstrap support for D3B410 as seed ortholog is 100%.

Group of orthologs #1952. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.pallidum:86

H2Y1V2              	100.00%		D3B031              	100.00%
Bootstrap support for H2Y1V2 as seed ortholog is 100%.
Bootstrap support for D3B031 as seed ortholog is 100%.

Group of orthologs #1953. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.pallidum:86

H2XVT6              	100.00%		D3BE21              	100.00%
Bootstrap support for H2XVT6 as seed ortholog is 100%.
Bootstrap support for D3BE21 as seed ortholog is 100%.

Group of orthologs #1954. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 P.pallidum:86

H2Y026              	100.00%		D3BGK9              	100.00%
Bootstrap support for H2Y026 as seed ortholog is 100%.
Bootstrap support for D3BGK9 as seed ortholog is 100%.

Group of orthologs #1955. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.pallidum:85

F6WII1              	100.00%		D3B937              	100.00%
Bootstrap support for F6WII1 as seed ortholog is 100%.
Bootstrap support for D3B937 as seed ortholog is 100%.

Group of orthologs #1956. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.pallidum:85

H2XWX6              	100.00%		D3B139              	100.00%
Bootstrap support for H2XWX6 as seed ortholog is 100%.
Bootstrap support for D3B139 as seed ortholog is 100%.

Group of orthologs #1957. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.pallidum:85

H2XT29              	100.00%		D3BHE5              	100.00%
Bootstrap support for H2XT29 as seed ortholog is 100%.
Bootstrap support for D3BHE5 as seed ortholog is 100%.

Group of orthologs #1958. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 P.pallidum:85

F7BD80              	100.00%		D3BSZ7              	100.00%
Bootstrap support for F7BD80 as seed ortholog is 100%.
Bootstrap support for D3BSZ7 as seed ortholog is 100%.

Group of orthologs #1959. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.pallidum:30

F7BH38              	100.00%		D3B654              	100.00%
F6UCD8              	29.84%		D3BNG4              	100.00%
                    	       		D3BKP4              	10.09%
                    	       		D3B834              	6.24%
                    	       		D3B6L0              	5.87%
                    	       		D3B1J1              	5.32%
Bootstrap support for F7BH38 as seed ortholog is 100%.
Bootstrap support for D3B654 as seed ortholog is 80%.
Bootstrap support for D3BNG4 as seed ortholog is 80%.

Group of orthologs #1960. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.pallidum:84

F6TI40              	100.00%		D3BG96              	100.00%
H2XMY4              	40.00%		
F6TI69              	39.19%		
Q4H396              	6.02%		
F6S909              	5.85%		
F6S925              	5.20%		
Bootstrap support for F6TI40 as seed ortholog is 100%.
Bootstrap support for D3BG96 as seed ortholog is 100%.

Group of orthologs #1961. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.pallidum:84

F7B418              	100.00%		D3BAS9              	100.00%
H2XQ36              	15.89%		
F6X0G2              	6.58%		
Bootstrap support for F7B418 as seed ortholog is 100%.
Bootstrap support for D3BAS9 as seed ortholog is 100%.

Group of orthologs #1962. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.pallidum:38

F6REQ0              	100.00%		D3AX40              	100.00%
F6QM62              	5.18%		
Bootstrap support for F6REQ0 as seed ortholog is 100%.
Bootstrap support for D3AX40 as seed ortholog is 71%.
Alternative seed ortholog is D3BG32 (38 bits away from this cluster)

Group of orthologs #1963. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 P.pallidum:84

H2XZI6              	100.00%		D3BIF7              	100.00%
Bootstrap support for H2XZI6 as seed ortholog is 100%.
Bootstrap support for D3BIF7 as seed ortholog is 100%.

Group of orthologs #1964. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.pallidum:83

F6VCD8              	100.00%		D3BP64              	100.00%
F6SGH3              	35.56%		
Bootstrap support for F6VCD8 as seed ortholog is 100%.
Bootstrap support for D3BP64 as seed ortholog is 100%.

Group of orthologs #1965. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.pallidum:83

F6U5W6              	100.00%		D3AZX3              	100.00%
Bootstrap support for F6U5W6 as seed ortholog is 100%.
Bootstrap support for D3AZX3 as seed ortholog is 100%.

Group of orthologs #1966. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.pallidum:83

F6WIJ0              	100.00%		D3B5Z9              	100.00%
Bootstrap support for F6WIJ0 as seed ortholog is 100%.
Bootstrap support for D3B5Z9 as seed ortholog is 100%.

Group of orthologs #1967. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.pallidum:83

F7ARN8              	100.00%		D3BET1              	100.00%
Bootstrap support for F7ARN8 as seed ortholog is 100%.
Bootstrap support for D3BET1 as seed ortholog is 100%.

Group of orthologs #1968. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.pallidum:83

H2XQ56              	100.00%		D3BP63              	100.00%
Bootstrap support for H2XQ56 as seed ortholog is 100%.
Bootstrap support for D3BP63 as seed ortholog is 100%.

Group of orthologs #1969. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 P.pallidum:83

H2Y0Q6              	100.00%		D3BFN4              	100.00%
Bootstrap support for H2Y0Q6 as seed ortholog is 100%.
Bootstrap support for D3BFN4 as seed ortholog is 100%.

Group of orthologs #1970. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 P.pallidum:83

H2XVI5              	100.00%		D3BUW6              	100.00%
Bootstrap support for H2XVI5 as seed ortholog is 60%.
Alternative seed ortholog is F6ZG00 (9 bits away from this cluster)
Bootstrap support for D3BUW6 as seed ortholog is 100%.

Group of orthologs #1971. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 P.pallidum:82

F6QSB8              	100.00%		D3B3T7              	100.00%
                    	       		D3B3T6              	82.30%
                    	       		D3BAR5              	44.41%
                    	       		D3BNP5              	39.13%
                    	       		D3BB48              	17.39%
                    	       		D3BRI5              	17.08%
                    	       		D3BKN3              	16.77%
Bootstrap support for F6QSB8 as seed ortholog is 64%.
Alternative seed ortholog is F6V9K6 (10 bits away from this cluster)
Bootstrap support for D3B3T7 as seed ortholog is 100%.

Group of orthologs #1972. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 P.pallidum:82

F7BAS4              	100.00%		D3BM01              	100.00%
F6VQS8              	42.74%		D3BD22              	10.58%
F6RGU6              	5.33%		
F6RC45              	5.19%		
Bootstrap support for F7BAS4 as seed ortholog is 55%.
Alternative seed ortholog is F6TIH6 (5 bits away from this cluster)
Bootstrap support for D3BM01 as seed ortholog is 100%.

Group of orthologs #1973. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.pallidum:82

F6Q3E6              	100.00%		D3B9L3              	100.00%
Bootstrap support for F6Q3E6 as seed ortholog is 100%.
Bootstrap support for D3B9L3 as seed ortholog is 100%.

Group of orthologs #1974. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.pallidum:82

F6PWM6              	100.00%		D3BE12              	100.00%
Bootstrap support for F6PWM6 as seed ortholog is 100%.
Bootstrap support for D3BE12 as seed ortholog is 100%.

Group of orthologs #1975. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.pallidum:82

F6SAX1              	100.00%		D3BEE9              	100.00%
Bootstrap support for F6SAX1 as seed ortholog is 100%.
Bootstrap support for D3BEE9 as seed ortholog is 100%.

Group of orthologs #1976. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.pallidum:82

H2XKE1              	100.00%		D3AYU8              	100.00%
Bootstrap support for H2XKE1 as seed ortholog is 100%.
Bootstrap support for D3AYU8 as seed ortholog is 100%.

Group of orthologs #1977. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.pallidum:82

F6T1X5              	100.00%		D3BP93              	100.00%
Bootstrap support for F6T1X5 as seed ortholog is 100%.
Bootstrap support for D3BP93 as seed ortholog is 100%.

Group of orthologs #1978. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.pallidum:82

F7ATQ3              	100.00%		D3BBP9              	100.00%
Bootstrap support for F7ATQ3 as seed ortholog is 100%.
Bootstrap support for D3BBP9 as seed ortholog is 100%.

Group of orthologs #1979. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.pallidum:82

F7BHB8              	100.00%		D3BM84              	100.00%
Bootstrap support for F7BHB8 as seed ortholog is 100%.
Bootstrap support for D3BM84 as seed ortholog is 100%.

Group of orthologs #1980. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 P.pallidum:82

H2XKZ3              	100.00%		D3BSK8              	100.00%
Bootstrap support for H2XKZ3 as seed ortholog is 88%.
Bootstrap support for D3BSK8 as seed ortholog is 100%.

Group of orthologs #1981. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.pallidum:82

H2Y0A6              	100.00%		D3BFU3              	100.00%
Bootstrap support for H2Y0A6 as seed ortholog is 100%.
Bootstrap support for D3BFU3 as seed ortholog is 100%.

Group of orthologs #1982. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 P.pallidum:82

H2Y0B1              	100.00%		D3BHG6              	100.00%
Bootstrap support for H2Y0B1 as seed ortholog is 100%.
Bootstrap support for D3BHG6 as seed ortholog is 100%.

Group of orthologs #1983. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.pallidum:13

F6WK26              	100.00%		D3BNM3              	100.00%
F6PLJ3              	46.04%		
Bootstrap support for F6WK26 as seed ortholog is 100%.
Bootstrap support for D3BNM3 as seed ortholog is 76%.

Group of orthologs #1984. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.pallidum:81

F6UPP6              	100.00%		D3AXG1              	100.00%
Bootstrap support for F6UPP6 as seed ortholog is 100%.
Bootstrap support for D3AXG1 as seed ortholog is 100%.

Group of orthologs #1985. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.pallidum:81

F6QD73              	100.00%		D3B7X8              	100.00%
Bootstrap support for F6QD73 as seed ortholog is 100%.
Bootstrap support for D3B7X8 as seed ortholog is 100%.

Group of orthologs #1986. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.pallidum:81

F6ZF56              	100.00%		D3AXR3              	100.00%
Bootstrap support for F6ZF56 as seed ortholog is 100%.
Bootstrap support for D3AXR3 as seed ortholog is 100%.

Group of orthologs #1987. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.pallidum:81

F6S5D5              	100.00%		D3BJI6              	100.00%
Bootstrap support for F6S5D5 as seed ortholog is 100%.
Bootstrap support for D3BJI6 as seed ortholog is 100%.

Group of orthologs #1988. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.pallidum:81

F6VE17              	100.00%		D3BQT8              	100.00%
Bootstrap support for F6VE17 as seed ortholog is 100%.
Bootstrap support for D3BQT8 as seed ortholog is 100%.

Group of orthologs #1989. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.pallidum:81

F6W3V6              	100.00%		D3BQ32              	100.00%
Bootstrap support for F6W3V6 as seed ortholog is 100%.
Bootstrap support for D3BQ32 as seed ortholog is 100%.

Group of orthologs #1990. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.pallidum:81

F6YTA1              	100.00%		D3BJT0              	100.00%
Bootstrap support for F6YTA1 as seed ortholog is 100%.
Bootstrap support for D3BJT0 as seed ortholog is 100%.

Group of orthologs #1991. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.pallidum:81

F6ZFT6              	100.00%		D3BLD5              	100.00%
Bootstrap support for F6ZFT6 as seed ortholog is 100%.
Bootstrap support for D3BLD5 as seed ortholog is 100%.

Group of orthologs #1992. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.pallidum:81

F6YN13              	100.00%		D3BPI2              	100.00%
Bootstrap support for F6YN13 as seed ortholog is 100%.
Bootstrap support for D3BPI2 as seed ortholog is 100%.

Group of orthologs #1993. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 P.pallidum:81

Q1RLC9              	100.00%		D3B3B7              	100.00%
Bootstrap support for Q1RLC9 as seed ortholog is 100%.
Bootstrap support for D3B3B7 as seed ortholog is 100%.

Group of orthologs #1994. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 P.pallidum:80

F6SEF1              	100.00%		D3B2E2              	100.00%
Bootstrap support for F6SEF1 as seed ortholog is 100%.
Bootstrap support for D3B2E2 as seed ortholog is 100%.

Group of orthologs #1995. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 P.pallidum:80

F6W8Z2              	100.00%		D3B1B7              	100.00%
Bootstrap support for F6W8Z2 as seed ortholog is 100%.
Bootstrap support for D3B1B7 as seed ortholog is 100%.

Group of orthologs #1996. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 P.pallidum:80

F6VV86              	100.00%		D3BA99              	100.00%
Bootstrap support for F6VV86 as seed ortholog is 100%.
Bootstrap support for D3BA99 as seed ortholog is 100%.

Group of orthologs #1997. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 P.pallidum:80

F6Y3C0              	100.00%		D3BE92              	100.00%
Bootstrap support for F6Y3C0 as seed ortholog is 100%.
Bootstrap support for D3BE92 as seed ortholog is 100%.

Group of orthologs #1998. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 P.pallidum:80

H2XKA1              	100.00%		D3BJY7              	100.00%
Bootstrap support for H2XKA1 as seed ortholog is 100%.
Bootstrap support for D3BJY7 as seed ortholog is 100%.

Group of orthologs #1999. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.pallidum:79

H2XX60              	100.00%		D3B9S9              	100.00%
F6TUQ2              	26.45%		
H2XUX5              	18.10%		
Bootstrap support for H2XX60 as seed ortholog is 100%.
Bootstrap support for D3B9S9 as seed ortholog is 100%.

Group of orthologs #2000. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 P.pallidum:79

Q1RLF0              	100.00%		D3BF23              	100.00%
Q1RPY5              	17.08%		
F6T7F9              	12.03%		
Bootstrap support for Q1RLF0 as seed ortholog is 71%.
Alternative seed ortholog is F6ZAH0 (16 bits away from this cluster)
Bootstrap support for D3BF23 as seed ortholog is 100%.

Group of orthologs #2001. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.pallidum:79

H2XRR7              	100.00%		D3AZU2              	100.00%
F6WUA7              	6.67%		
Bootstrap support for H2XRR7 as seed ortholog is 100%.
Bootstrap support for D3AZU2 as seed ortholog is 100%.

Group of orthologs #2002. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.pallidum:79

F6WQJ1              	100.00%		D3AVT1              	100.00%
Bootstrap support for F6WQJ1 as seed ortholog is 100%.
Bootstrap support for D3AVT1 as seed ortholog is 100%.

Group of orthologs #2003. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.pallidum:28

F6U182              	100.00%		D3B2B3              	100.00%
Bootstrap support for F6U182 as seed ortholog is 100%.
Bootstrap support for D3B2B3 as seed ortholog is 91%.

Group of orthologs #2004. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.pallidum:79

F6SAW5              	100.00%		D3BCL6              	100.00%
Bootstrap support for F6SAW5 as seed ortholog is 100%.
Bootstrap support for D3BCL6 as seed ortholog is 100%.

Group of orthologs #2005. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 P.pallidum:20

F6WMA6              	100.00%		D3B5D3              	100.00%
Bootstrap support for F6WMA6 as seed ortholog is 91%.
Bootstrap support for D3B5D3 as seed ortholog is 75%.

Group of orthologs #2006. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.pallidum:79

F6QBK7              	100.00%		D3BT01              	100.00%
Bootstrap support for F6QBK7 as seed ortholog is 100%.
Bootstrap support for D3BT01 as seed ortholog is 100%.

Group of orthologs #2007. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.pallidum:79

F6UVD8              	100.00%		D3BSP9              	100.00%
Bootstrap support for F6UVD8 as seed ortholog is 100%.
Bootstrap support for D3BSP9 as seed ortholog is 100%.

Group of orthologs #2008. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.pallidum:79

H2XTC9              	100.00%		D3BI32              	100.00%
Bootstrap support for H2XTC9 as seed ortholog is 100%.
Bootstrap support for D3BI32 as seed ortholog is 100%.

Group of orthologs #2009. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 P.pallidum:79

H2Y2A8              	100.00%		D3BBG4              	100.00%
Bootstrap support for H2Y2A8 as seed ortholog is 100%.
Bootstrap support for D3BBG4 as seed ortholog is 100%.

Group of orthologs #2010. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.pallidum:78

F6TBB0              	100.00%		D3BPZ1              	100.00%
Bootstrap support for F6TBB0 as seed ortholog is 100%.
Bootstrap support for D3BPZ1 as seed ortholog is 100%.

Group of orthologs #2011. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.pallidum:78

F6Z3A0              	100.00%		D3BE95              	100.00%
Bootstrap support for F6Z3A0 as seed ortholog is 100%.
Bootstrap support for D3BE95 as seed ortholog is 100%.

Group of orthologs #2012. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.pallidum:78

F7A5R5              	100.00%		D3BN85              	100.00%
Bootstrap support for F7A5R5 as seed ortholog is 100%.
Bootstrap support for D3BN85 as seed ortholog is 100%.

Group of orthologs #2013. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 P.pallidum:78

F7BPC9              	100.00%		D3BTS2              	100.00%
Bootstrap support for F7BPC9 as seed ortholog is 100%.
Bootstrap support for D3BTS2 as seed ortholog is 100%.

Group of orthologs #2014. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:77

F6TZY2              	100.00%		D3AXI2              	100.00%
F6TZQ2              	88.69%		
F7ARA7              	16.79%		
F7ARA1              	12.77%		
Bootstrap support for F6TZY2 as seed ortholog is 100%.
Bootstrap support for D3AXI2 as seed ortholog is 100%.

Group of orthologs #2015. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:15

F7AVN5              	100.00%		D3BRA4              	100.00%
                    	       		D3BSH1              	41.02%
                    	       		D3BQ37              	27.35%
                    	       		D3AWE8              	14.57%
Bootstrap support for F7AVN5 as seed ortholog is 100%.
Bootstrap support for D3BRA4 as seed ortholog is 63%.
Alternative seed ortholog is D3AXP3 (15 bits away from this cluster)

Group of orthologs #2016. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:77

F6VY59              	100.00%		D3AWI0              	100.00%
Bootstrap support for F6VY59 as seed ortholog is 100%.
Bootstrap support for D3AWI0 as seed ortholog is 100%.

Group of orthologs #2017. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:77

F6S2Y7              	100.00%		D3B6Z4              	100.00%
Bootstrap support for F6S2Y7 as seed ortholog is 100%.
Bootstrap support for D3B6Z4 as seed ortholog is 100%.

Group of orthologs #2018. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:77

F6Y978              	100.00%		D3AVI6              	100.00%
Bootstrap support for F6Y978 as seed ortholog is 100%.
Bootstrap support for D3AVI6 as seed ortholog is 100%.

Group of orthologs #2019. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 P.pallidum:77

F6UPQ6              	100.00%		D3B712              	100.00%
Bootstrap support for F6UPQ6 as seed ortholog is 84%.
Bootstrap support for D3B712 as seed ortholog is 100%.

Group of orthologs #2020. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:77

F6XLA1              	100.00%		D3BA44              	100.00%
Bootstrap support for F6XLA1 as seed ortholog is 100%.
Bootstrap support for D3BA44 as seed ortholog is 100%.

Group of orthologs #2021. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:77

F6YY79              	100.00%		D3BCM1              	100.00%
Bootstrap support for F6YY79 as seed ortholog is 100%.
Bootstrap support for D3BCM1 as seed ortholog is 100%.

Group of orthologs #2022. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:77

F6ZM08              	100.00%		D3BBU2              	100.00%
Bootstrap support for F6ZM08 as seed ortholog is 100%.
Bootstrap support for D3BBU2 as seed ortholog is 100%.

Group of orthologs #2023. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:77

F6W3Q3              	100.00%		D3BNR1              	100.00%
Bootstrap support for F6W3Q3 as seed ortholog is 100%.
Bootstrap support for D3BNR1 as seed ortholog is 100%.

Group of orthologs #2024. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 P.pallidum:77

F7AKT1              	100.00%		D3BE38              	100.00%
Bootstrap support for F7AKT1 as seed ortholog is 88%.
Bootstrap support for D3BE38 as seed ortholog is 100%.

Group of orthologs #2025. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:77

H2XMW5              	100.00%		D3B818              	100.00%
Bootstrap support for H2XMW5 as seed ortholog is 100%.
Bootstrap support for D3B818 as seed ortholog is 100%.

Group of orthologs #2026. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:77

F7B819              	100.00%		D3BDS4              	100.00%
Bootstrap support for F7B819 as seed ortholog is 100%.
Bootstrap support for D3BDS4 as seed ortholog is 100%.

Group of orthologs #2027. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:77

F6YJG1              	100.00%		D3BNJ5              	100.00%
Bootstrap support for F6YJG1 as seed ortholog is 100%.
Bootstrap support for D3BNJ5 as seed ortholog is 100%.

Group of orthologs #2028. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:77

F6ZED0              	100.00%		D3BM22              	100.00%
Bootstrap support for F6ZED0 as seed ortholog is 100%.
Bootstrap support for D3BM22 as seed ortholog is 100%.

Group of orthologs #2029. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:77

F6Y9F6              	100.00%		D3BQE3              	100.00%
Bootstrap support for F6Y9F6 as seed ortholog is 100%.
Bootstrap support for D3BQE3 as seed ortholog is 100%.

Group of orthologs #2030. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 P.pallidum:77

H2XQD7              	100.00%		D3BVD4              	100.00%
Bootstrap support for H2XQD7 as seed ortholog is 100%.
Bootstrap support for D3BVD4 as seed ortholog is 100%.

Group of orthologs #2031. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.pallidum:76

F6TJR3              	100.00%		D3BEQ7              	100.00%
F7AV79              	35.58%		
F6V6C3              	18.84%		
Bootstrap support for F6TJR3 as seed ortholog is 100%.
Bootstrap support for D3BEQ7 as seed ortholog is 100%.

Group of orthologs #2032. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.pallidum:76

F7BHW5              	100.00%		D3B549              	100.00%
                    	       		D3BGM2              	35.70%
Bootstrap support for F7BHW5 as seed ortholog is 100%.
Bootstrap support for D3B549 as seed ortholog is 100%.

Group of orthologs #2033. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.pallidum:76

F6PMB4              	100.00%		D3B7K6              	100.00%
Bootstrap support for F6PMB4 as seed ortholog is 100%.
Bootstrap support for D3B7K6 as seed ortholog is 100%.

Group of orthologs #2034. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.pallidum:76

F6R906              	100.00%		D3B4S6              	100.00%
Bootstrap support for F6R906 as seed ortholog is 100%.
Bootstrap support for D3B4S6 as seed ortholog is 100%.

Group of orthologs #2035. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.pallidum:76

F7BMD5              	100.00%		D3AX53              	100.00%
Bootstrap support for F7BMD5 as seed ortholog is 100%.
Bootstrap support for D3AX53 as seed ortholog is 100%.

Group of orthologs #2036. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.pallidum:76

H2Y1J4              	100.00%		D3B815              	100.00%
Bootstrap support for H2Y1J4 as seed ortholog is 100%.
Bootstrap support for D3B815 as seed ortholog is 100%.

Group of orthologs #2037. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.pallidum:76

H2XM57              	100.00%		D3BP71              	100.00%
Bootstrap support for H2XM57 as seed ortholog is 100%.
Bootstrap support for D3BP71 as seed ortholog is 100%.

Group of orthologs #2038. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 P.pallidum:76

H2Y013              	100.00%		D3BJ38              	100.00%
Bootstrap support for H2Y013 as seed ortholog is 100%.
Bootstrap support for D3BJ38 as seed ortholog is 100%.

Group of orthologs #2039. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.pallidum:75

F7B3N6              	100.00%		D3BCP6              	100.00%
                    	       		D3BCW5              	86.95%
                    	       		D3BDW5              	53.61%
                    	       		D3BDV5              	48.95%
                    	       		D3B0Z2              	40.56%
                    	       		D3BNK4              	20.75%
                    	       		D3AZQ3              	19.81%
                    	       		D3BQ17              	8.39%
Bootstrap support for F7B3N6 as seed ortholog is 100%.
Bootstrap support for D3BCP6 as seed ortholog is 100%.

Group of orthologs #2040. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.pallidum:75

H2Y0H0              	100.00%		D3BVN1              	100.00%
H2XKZ2              	14.29%		D3BVN0              	43.29%
Bootstrap support for H2Y0H0 as seed ortholog is 100%.
Bootstrap support for D3BVN1 as seed ortholog is 100%.

Group of orthologs #2041. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.pallidum:35

F6SA32              	100.00%		D3BI95              	100.00%
                    	       		D3BMN2              	5.22%
Bootstrap support for F6SA32 as seed ortholog is 100%.
Bootstrap support for D3BI95 as seed ortholog is 59%.
Alternative seed ortholog is D3BPP8 (35 bits away from this cluster)

Group of orthologs #2042. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.pallidum:75

F6WCD3              	100.00%		D3BGT5              	100.00%
                    	       		D3BH52              	9.76%
Bootstrap support for F6WCD3 as seed ortholog is 100%.
Bootstrap support for D3BGT5 as seed ortholog is 100%.

Group of orthologs #2043. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.pallidum:75

F7BMH5              	100.00%		D3B7A4              	100.00%
Bootstrap support for F7BMH5 as seed ortholog is 100%.
Bootstrap support for D3B7A4 as seed ortholog is 100%.

Group of orthologs #2044. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.pallidum:75

H2XWZ6              	100.00%		D3B4A4              	100.00%
Bootstrap support for H2XWZ6 as seed ortholog is 100%.
Bootstrap support for D3B4A4 as seed ortholog is 100%.

Group of orthologs #2045. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.pallidum:75

H2XSS0              	100.00%		D3BPP6              	100.00%
Bootstrap support for H2XSS0 as seed ortholog is 100%.
Bootstrap support for D3BPP6 as seed ortholog is 100%.

Group of orthologs #2046. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.pallidum:75

H2Y1C3              	100.00%		D3BJK7              	100.00%
Bootstrap support for H2Y1C3 as seed ortholog is 100%.
Bootstrap support for D3BJK7 as seed ortholog is 100%.

Group of orthologs #2047. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 P.pallidum:75

Q4H2R5              	100.00%		D3BNN0              	100.00%
Bootstrap support for Q4H2R5 as seed ortholog is 100%.
Bootstrap support for D3BNN0 as seed ortholog is 100%.

Group of orthologs #2048. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:20

F6X4P6              	100.00%		D3AWJ4              	100.00%
F6YAG6              	13.16%		
Bootstrap support for F6X4P6 as seed ortholog is 100%.
Bootstrap support for D3AWJ4 as seed ortholog is 75%.

Group of orthologs #2049. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:74

F6TIT1              	100.00%		D3BD55              	100.00%
H2XL14              	5.91%		
Bootstrap support for F6TIT1 as seed ortholog is 100%.
Bootstrap support for D3BD55 as seed ortholog is 100%.

Group of orthologs #2050. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:74

F6QAG3              	100.00%		D3B6B4              	100.00%
Bootstrap support for F6QAG3 as seed ortholog is 100%.
Bootstrap support for D3B6B4 as seed ortholog is 100%.

Group of orthologs #2051. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:74

F6U212              	100.00%		D3AZK0              	100.00%
Bootstrap support for F6U212 as seed ortholog is 100%.
Bootstrap support for D3AZK0 as seed ortholog is 100%.

Group of orthologs #2052. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:74

F6W2K0              	100.00%		D3AVI4              	100.00%
Bootstrap support for F6W2K0 as seed ortholog is 100%.
Bootstrap support for D3AVI4 as seed ortholog is 100%.

Group of orthologs #2053. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:74

F6UU76              	100.00%		D3B416              	100.00%
Bootstrap support for F6UU76 as seed ortholog is 100%.
Bootstrap support for D3B416 as seed ortholog is 100%.

Group of orthologs #2054. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:74

F6YAA4              	100.00%		D3BAT8              	100.00%
Bootstrap support for F6YAA4 as seed ortholog is 100%.
Bootstrap support for D3BAT8 as seed ortholog is 100%.

Group of orthologs #2055. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:74

F6WVC9              	100.00%		D3BF01              	100.00%
Bootstrap support for F6WVC9 as seed ortholog is 100%.
Bootstrap support for D3BF01 as seed ortholog is 100%.

Group of orthologs #2056. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:74

F6YIU9              	100.00%		D3BFQ3              	100.00%
Bootstrap support for F6YIU9 as seed ortholog is 100%.
Bootstrap support for D3BFQ3 as seed ortholog is 100%.

Group of orthologs #2057. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:74

F6T7B1              	100.00%		D3BSQ2              	100.00%
Bootstrap support for F6T7B1 as seed ortholog is 100%.
Bootstrap support for D3BSQ2 as seed ortholog is 100%.

Group of orthologs #2058. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:74

H2XTD6              	100.00%		D3B6G0              	100.00%
Bootstrap support for H2XTD6 as seed ortholog is 100%.
Bootstrap support for D3B6G0 as seed ortholog is 100%.

Group of orthologs #2059. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:74

H2XKM5              	100.00%		D3BVK7              	100.00%
Bootstrap support for H2XKM5 as seed ortholog is 100%.
Bootstrap support for D3BVK7 as seed ortholog is 100%.

Group of orthologs #2060. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:74

H2XWY8              	100.00%		D3BKS5              	100.00%
Bootstrap support for H2XWY8 as seed ortholog is 100%.
Bootstrap support for D3BKS5 as seed ortholog is 100%.

Group of orthologs #2061. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:74

H2XVR3              	100.00%		D3BP92              	100.00%
Bootstrap support for H2XVR3 as seed ortholog is 100%.
Bootstrap support for D3BP92 as seed ortholog is 100%.

Group of orthologs #2062. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 P.pallidum:74

H2XWG7              	100.00%		D3BQ99              	100.00%
Bootstrap support for H2XWG7 as seed ortholog is 100%.
Bootstrap support for D3BQ99 as seed ortholog is 100%.

Group of orthologs #2063. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 P.pallidum:16

F6ULA8              	100.00%		D3B8A0              	100.00%
Bootstrap support for F6ULA8 as seed ortholog is 61%.
Alternative seed ortholog is H2XZX7 (11 bits away from this cluster)
Bootstrap support for D3B8A0 as seed ortholog is 66%.
Alternative seed ortholog is D3BHK8 (16 bits away from this cluster)

Group of orthologs #2064. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.pallidum:73

F6ZIQ8              	100.00%		D3AXS1              	100.00%
Bootstrap support for F6ZIQ8 as seed ortholog is 100%.
Bootstrap support for D3AXS1 as seed ortholog is 100%.

Group of orthologs #2065. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.pallidum:73

F6RG39              	100.00%		D3BMD1              	100.00%
Bootstrap support for F6RG39 as seed ortholog is 100%.
Bootstrap support for D3BMD1 as seed ortholog is 100%.

Group of orthologs #2066. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 P.pallidum:73

F6YXQ0              	100.00%		D3BAT7              	100.00%
Bootstrap support for F6YXQ0 as seed ortholog is 46%.
Alternative seed ortholog is F6PW43 (1 bits away from this cluster)
Bootstrap support for D3BAT7 as seed ortholog is 100%.

Group of orthologs #2067. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.pallidum:73

F7ACY4              	100.00%		D3BT15              	100.00%
Bootstrap support for F7ACY4 as seed ortholog is 100%.
Bootstrap support for D3BT15 as seed ortholog is 100%.

Group of orthologs #2068. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 P.pallidum:73

H2XWS2              	100.00%		D3BTK5              	100.00%
Bootstrap support for H2XWS2 as seed ortholog is 100%.
Bootstrap support for D3BTK5 as seed ortholog is 100%.

Group of orthologs #2069. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.pallidum:72

F6ULU6              	100.00%		D3BKB7              	100.00%
H2XZ40              	42.80%		
F7AP79              	28.26%		
Bootstrap support for F6ULU6 as seed ortholog is 100%.
Bootstrap support for D3BKB7 as seed ortholog is 100%.

Group of orthologs #2070. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.pallidum:72

H2XUF9              	100.00%		D3AWK1              	100.00%
F6XEC9              	14.12%		
F6Z7K7              	6.49%		
Bootstrap support for H2XUF9 as seed ortholog is 100%.
Bootstrap support for D3AWK1 as seed ortholog is 100%.

Group of orthologs #2071. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.pallidum:0

F6TVN3              	100.00%		D3BIS6              	100.00%
Bootstrap support for F6TVN3 as seed ortholog is 100%.
Bootstrap support for D3BIS6 as seed ortholog is 55%.
Alternative seed ortholog is D3B4G4 (0 bits away from this cluster)

Group of orthologs #2072. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 P.pallidum:72

F6WS42              	100.00%		D3BP65              	100.00%
Bootstrap support for F6WS42 as seed ortholog is 100%.
Bootstrap support for D3BP65 as seed ortholog is 100%.

Group of orthologs #2073. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.pallidum:71

F6V318              	100.00%		D3BBU1              	100.00%
F6V3M5              	6.90%		
Bootstrap support for F6V318 as seed ortholog is 100%.
Bootstrap support for D3BBU1 as seed ortholog is 100%.

Group of orthologs #2074. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.pallidum:71

F6XY36              	100.00%		D3BB44              	100.00%
F6R1K9              	19.42%		
Bootstrap support for F6XY36 as seed ortholog is 100%.
Bootstrap support for D3BB44 as seed ortholog is 100%.

Group of orthologs #2075. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.pallidum:71

F6SPV5              	100.00%		D3B3B8              	100.00%
Bootstrap support for F6SPV5 as seed ortholog is 100%.
Bootstrap support for D3B3B8 as seed ortholog is 100%.

Group of orthologs #2076. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.pallidum:71

F6ZE91              	100.00%		D3B644              	100.00%
Bootstrap support for F6ZE91 as seed ortholog is 100%.
Bootstrap support for D3B644 as seed ortholog is 100%.

Group of orthologs #2077. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.pallidum:71

F6YSL9              	100.00%		D3BQR2              	100.00%
Bootstrap support for F6YSL9 as seed ortholog is 100%.
Bootstrap support for D3BQR2 as seed ortholog is 100%.

Group of orthologs #2078. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 P.pallidum:22

H2XVS4              	100.00%		D3BFW2              	100.00%
Bootstrap support for H2XVS4 as seed ortholog is 59%.
Alternative seed ortholog is F6QN05 (13 bits away from this cluster)
Bootstrap support for D3BFW2 as seed ortholog is 65%.
Alternative seed ortholog is D3B4P7 (22 bits away from this cluster)

Group of orthologs #2079. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.pallidum:71

H2XVM5              	100.00%		D3BG33              	100.00%
Bootstrap support for H2XVM5 as seed ortholog is 100%.
Bootstrap support for D3BG33 as seed ortholog is 100%.

Group of orthologs #2080. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 P.pallidum:71

H2XJW9              	100.00%		D3BSK2              	100.00%
Bootstrap support for H2XJW9 as seed ortholog is 100%.
Bootstrap support for D3BSK2 as seed ortholog is 100%.

Group of orthologs #2081. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.pallidum:70

H2XRT4              	100.00%		D3BEL6              	100.00%
H2Y3A9              	70.57%		D3BSU0              	51.39%
                    	       		D3BST9              	45.60%
                    	       		D3AY83              	31.71%
                    	       		D3B424              	31.02%
                    	       		D3AY82              	27.55%
Bootstrap support for H2XRT4 as seed ortholog is 100%.
Bootstrap support for D3BEL6 as seed ortholog is 100%.

Group of orthologs #2082. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.pallidum:70

F7AK54              	100.00%		D3BVM5              	100.00%
H2XZE7              	48.18%		
Bootstrap support for F7AK54 as seed ortholog is 100%.
Bootstrap support for D3BVM5 as seed ortholog is 100%.

Group of orthologs #2083. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.pallidum:70

F6QFG5              	100.00%		D3BTS8              	100.00%
Bootstrap support for F6QFG5 as seed ortholog is 100%.
Bootstrap support for D3BTS8 as seed ortholog is 100%.

Group of orthologs #2084. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 P.pallidum:15

F6XV68              	100.00%		D3BEH5              	100.00%
Bootstrap support for F6XV68 as seed ortholog is 73%.
Alternative seed ortholog is F7B5E7 (12 bits away from this cluster)
Bootstrap support for D3BEH5 as seed ortholog is 76%.

Group of orthologs #2085. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.pallidum:70

H2XPJ3              	100.00%		D3B636              	100.00%
Bootstrap support for H2XPJ3 as seed ortholog is 100%.
Bootstrap support for D3B636 as seed ortholog is 100%.

Group of orthologs #2086. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 P.pallidum:70

F7A5D0              	100.00%		D3BMH3              	100.00%
Bootstrap support for F7A5D0 as seed ortholog is 100%.
Bootstrap support for D3BMH3 as seed ortholog is 100%.

Group of orthologs #2087. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 P.pallidum:69

F6T511              	100.00%		D3B0G8              	100.00%
F6T518              	38.14%		D3B0G6              	38.62%
F6T526              	29.49%		
H2XY48              	28.44%		
F6T505              	24.64%		
Bootstrap support for F6T511 as seed ortholog is 69%.
Alternative seed ortholog is F7AMF2 (17 bits away from this cluster)
Bootstrap support for D3B0G8 as seed ortholog is 100%.

Group of orthologs #2088. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.pallidum:69

F6ZGB0              	100.00%		D3BDT9              	100.00%
                    	       		D3BB99              	13.10%
Bootstrap support for F6ZGB0 as seed ortholog is 100%.
Bootstrap support for D3BDT9 as seed ortholog is 100%.

Group of orthologs #2089. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.pallidum:69

F6PMM3              	100.00%		D3AXJ9              	100.00%
Bootstrap support for F6PMM3 as seed ortholog is 100%.
Bootstrap support for D3AXJ9 as seed ortholog is 100%.

Group of orthologs #2090. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.pallidum:69

F6QB35              	100.00%		D3B0D5              	100.00%
Bootstrap support for F6QB35 as seed ortholog is 100%.
Bootstrap support for D3B0D5 as seed ortholog is 100%.

Group of orthologs #2091. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.pallidum:69

F6R763              	100.00%		D3B1D9              	100.00%
Bootstrap support for F6R763 as seed ortholog is 100%.
Bootstrap support for D3B1D9 as seed ortholog is 100%.

Group of orthologs #2092. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.pallidum:69

F6SZR5              	100.00%		D3BG15              	100.00%
Bootstrap support for F6SZR5 as seed ortholog is 100%.
Bootstrap support for D3BG15 as seed ortholog is 100%.

Group of orthologs #2093. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.pallidum:69

F6TDH1              	100.00%		D3BFK4              	100.00%
Bootstrap support for F6TDH1 as seed ortholog is 100%.
Bootstrap support for D3BFK4 as seed ortholog is 100%.

Group of orthologs #2094. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.pallidum:69

F6TJY9              	100.00%		D3BK43              	100.00%
Bootstrap support for F6TJY9 as seed ortholog is 100%.
Bootstrap support for D3BK43 as seed ortholog is 100%.

Group of orthologs #2095. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 P.pallidum:69

F6T5I8              	100.00%		D3BNC8              	100.00%
Bootstrap support for F6T5I8 as seed ortholog is 81%.
Bootstrap support for D3BNC8 as seed ortholog is 100%.

Group of orthologs #2096. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 P.pallidum:69

F6XVG4              	100.00%		D3BGQ4              	100.00%
Bootstrap support for F6XVG4 as seed ortholog is 100%.
Bootstrap support for D3BGQ4 as seed ortholog is 100%.

Group of orthologs #2097. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.pallidum:68

H2XNW6              	100.00%		D3B2M2              	100.00%
H2XLB1              	41.76%		D3B6I5              	24.10%
Bootstrap support for H2XNW6 as seed ortholog is 100%.
Bootstrap support for D3B2M2 as seed ortholog is 100%.

Group of orthologs #2098. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.pallidum:68

Q589R6              	100.00%		D3B6V2              	100.00%
F6V062              	9.62%		D3BU00              	5.74%
Bootstrap support for Q589R6 as seed ortholog is 100%.
Bootstrap support for D3B6V2 as seed ortholog is 100%.

Group of orthologs #2099. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.pallidum:68

F6SYB9              	100.00%		D3BJA4              	100.00%
Bootstrap support for F6SYB9 as seed ortholog is 100%.
Bootstrap support for D3BJA4 as seed ortholog is 100%.

Group of orthologs #2100. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.pallidum:68

F6UNA9              	100.00%		D3BN90              	100.00%
Bootstrap support for F6UNA9 as seed ortholog is 100%.
Bootstrap support for D3BN90 as seed ortholog is 100%.

Group of orthologs #2101. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.pallidum:68

H2XTG7              	100.00%		D3BDM9              	100.00%
Bootstrap support for H2XTG7 as seed ortholog is 100%.
Bootstrap support for D3BDM9 as seed ortholog is 100%.

Group of orthologs #2102. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 P.pallidum:68

H2XJX4              	100.00%		D3BQ01              	100.00%
Bootstrap support for H2XJX4 as seed ortholog is 81%.
Bootstrap support for D3BQ01 as seed ortholog is 100%.

Group of orthologs #2103. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 P.pallidum:68

H2XRD8              	100.00%		D3BMR8              	100.00%
Bootstrap support for H2XRD8 as seed ortholog is 100%.
Bootstrap support for D3BMR8 as seed ortholog is 100%.

Group of orthologs #2104. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.pallidum:67

F6YNB1              	100.00%		D3AVS6              	100.00%
                    	       		D3AVS5              	53.48%
                    	       		D3AVS7              	22.17%
Bootstrap support for F6YNB1 as seed ortholog is 100%.
Bootstrap support for D3AVS6 as seed ortholog is 100%.

Group of orthologs #2105. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.pallidum:15

H2XTM4              	100.00%		D3BQB5              	100.00%
H2Y023              	53.57%		
Bootstrap support for H2XTM4 as seed ortholog is 100%.
Bootstrap support for D3BQB5 as seed ortholog is 75%.

Group of orthologs #2106. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.pallidum:67

F6R046              	100.00%		D3BQJ2              	100.00%
Bootstrap support for F6R046 as seed ortholog is 100%.
Bootstrap support for D3BQJ2 as seed ortholog is 100%.

Group of orthologs #2107. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.pallidum:67

H2XMW2              	100.00%		D3BE87              	100.00%
Bootstrap support for H2XMW2 as seed ortholog is 100%.
Bootstrap support for D3BE87 as seed ortholog is 100%.

Group of orthologs #2108. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 P.pallidum:67

H2XYR3              	100.00%		D3BEA7              	100.00%
Bootstrap support for H2XYR3 as seed ortholog is 100%.
Bootstrap support for D3BEA7 as seed ortholog is 100%.

Group of orthologs #2109. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.pallidum:66

F7AFK4              	100.00%		D3BM93              	100.00%
F7B4M1              	15.51%		D3BU13              	21.25%
F6S8I5              	13.10%		D3BR87              	13.54%
                    	       		D3AYT6              	10.54%
                    	       		D3BVK3              	8.43%
                    	       		D3BUC6              	6.24%
Bootstrap support for F7AFK4 as seed ortholog is 100%.
Bootstrap support for D3BM93 as seed ortholog is 100%.

Group of orthologs #2110. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.pallidum:66

F6PH01              	100.00%		D3BQZ3              	100.00%
Bootstrap support for F6PH01 as seed ortholog is 100%.
Bootstrap support for D3BQZ3 as seed ortholog is 100%.

Group of orthologs #2111. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.pallidum:66

H2Y0H4              	100.00%		D3AYG2              	100.00%
Bootstrap support for H2Y0H4 as seed ortholog is 100%.
Bootstrap support for D3AYG2 as seed ortholog is 100%.

Group of orthologs #2112. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.pallidum:66

H2XQB5              	100.00%		D3B8C2              	100.00%
Bootstrap support for H2XQB5 as seed ortholog is 100%.
Bootstrap support for D3B8C2 as seed ortholog is 100%.

Group of orthologs #2113. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.pallidum:66

F7B7K2              	100.00%		D3BH64              	100.00%
Bootstrap support for F7B7K2 as seed ortholog is 100%.
Bootstrap support for D3BH64 as seed ortholog is 100%.

Group of orthologs #2114. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.pallidum:66

H2XSJ3              	100.00%		D3B9D4              	100.00%
Bootstrap support for H2XSJ3 as seed ortholog is 100%.
Bootstrap support for D3B9D4 as seed ortholog is 100%.

Group of orthologs #2115. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.pallidum:66

H2XZE6              	100.00%		D3B6F0              	100.00%
Bootstrap support for H2XZE6 as seed ortholog is 100%.
Bootstrap support for D3B6F0 as seed ortholog is 100%.

Group of orthologs #2116. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 P.pallidum:66

H2Y334              	100.00%		D3BTX9              	100.00%
Bootstrap support for H2Y334 as seed ortholog is 100%.
Bootstrap support for D3BTX9 as seed ortholog is 100%.

Group of orthologs #2117. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.pallidum:65

F6ZDE8              	100.00%		D3BMJ6              	100.00%
H2Y1C6              	22.02%		D3BMJ7              	57.67%
F6VMU0              	13.21%		
F6SEC8              	6.74%		
Bootstrap support for F6ZDE8 as seed ortholog is 100%.
Bootstrap support for D3BMJ6 as seed ortholog is 100%.

Group of orthologs #2118. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.pallidum:65

Q4H2R0              	100.00%		D3BJ33              	100.00%
F6PPL2              	14.52%		D3B897              	8.96%
                    	       		D3B679              	8.90%
Bootstrap support for Q4H2R0 as seed ortholog is 100%.
Bootstrap support for D3BJ33 as seed ortholog is 100%.

Group of orthologs #2119. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.pallidum:65

F6R497              	100.00%		D3B7U8              	100.00%
F6XTC5              	39.85%		
Bootstrap support for F6R497 as seed ortholog is 100%.
Bootstrap support for D3B7U8 as seed ortholog is 100%.

Group of orthologs #2120. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.pallidum:65

F6XTV8              	100.00%		D3BAB3              	100.00%
Bootstrap support for F6XTV8 as seed ortholog is 100%.
Bootstrap support for D3BAB3 as seed ortholog is 100%.

Group of orthologs #2121. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.pallidum:65

F6WGN7              	100.00%		D3BFW0              	100.00%
Bootstrap support for F6WGN7 as seed ortholog is 100%.
Bootstrap support for D3BFW0 as seed ortholog is 100%.

Group of orthologs #2122. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 P.pallidum:2

H2XXT0              	100.00%		D3B6I2              	100.00%
Bootstrap support for H2XXT0 as seed ortholog is 100%.
Bootstrap support for D3B6I2 as seed ortholog is 52%.
Alternative seed ortholog is D3AYP2 (2 bits away from this cluster)

Group of orthologs #2123. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.pallidum:64

H2XTR6              	100.00%		D3B2R9              	100.00%
H2XW11              	12.30%		
Bootstrap support for H2XTR6 as seed ortholog is 100%.
Bootstrap support for D3B2R9 as seed ortholog is 100%.

Group of orthologs #2124. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.pallidum:64

F6YKG0              	100.00%		D3AXG0              	100.00%
Bootstrap support for F6YKG0 as seed ortholog is 100%.
Bootstrap support for D3AXG0 as seed ortholog is 100%.

Group of orthologs #2125. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.pallidum:64

F6Z2L4              	100.00%		D3B5N6              	100.00%
Bootstrap support for F6Z2L4 as seed ortholog is 100%.
Bootstrap support for D3B5N6 as seed ortholog is 100%.

Group of orthologs #2126. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.pallidum:13

F6T3H3              	100.00%		D3BJL1              	100.00%
Bootstrap support for F6T3H3 as seed ortholog is 100%.
Bootstrap support for D3BJL1 as seed ortholog is 73%.
Alternative seed ortholog is D3BKW5 (13 bits away from this cluster)

Group of orthologs #2127. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 P.pallidum:64

F6TGC0              	100.00%		D3BK78              	100.00%
Bootstrap support for F6TGC0 as seed ortholog is 65%.
Alternative seed ortholog is F6WRI2 (1 bits away from this cluster)
Bootstrap support for D3BK78 as seed ortholog is 100%.

Group of orthologs #2128. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.pallidum:64

F6Z1H7              	100.00%		D3B8B1              	100.00%
Bootstrap support for F6Z1H7 as seed ortholog is 100%.
Bootstrap support for D3B8B1 as seed ortholog is 100%.

Group of orthologs #2129. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.pallidum:64

H2XSA5              	100.00%		D3AY14              	100.00%
Bootstrap support for H2XSA5 as seed ortholog is 100%.
Bootstrap support for D3AY14 as seed ortholog is 100%.

Group of orthologs #2130. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.pallidum:64

F6ZGB7              	100.00%		D3BHV3              	100.00%
Bootstrap support for F6ZGB7 as seed ortholog is 100%.
Bootstrap support for D3BHV3 as seed ortholog is 100%.

Group of orthologs #2131. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.pallidum:64

H2XN47              	100.00%		D3BFQ7              	100.00%
Bootstrap support for H2XN47 as seed ortholog is 100%.
Bootstrap support for D3BFQ7 as seed ortholog is 100%.

Group of orthologs #2132. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 P.pallidum:64

F7A602              	100.00%		D3BTU4              	100.00%
Bootstrap support for F7A602 as seed ortholog is 100%.
Bootstrap support for D3BTU4 as seed ortholog is 100%.

Group of orthologs #2133. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 P.pallidum:63

F7BK27              	100.00%		D3BMQ4              	100.00%
                    	       		D3AYF8              	7.22%
Bootstrap support for F7BK27 as seed ortholog is 100%.
Bootstrap support for D3BMQ4 as seed ortholog is 100%.

Group of orthologs #2134. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 P.pallidum:63

H2XTS0              	100.00%		D3B2P0              	100.00%
Bootstrap support for H2XTS0 as seed ortholog is 100%.
Bootstrap support for D3B2P0 as seed ortholog is 100%.

Group of orthologs #2135. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 P.pallidum:63

H2XRD0              	100.00%		D3B9I4              	100.00%
Bootstrap support for H2XRD0 as seed ortholog is 100%.
Bootstrap support for D3B9I4 as seed ortholog is 100%.

Group of orthologs #2136. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 P.pallidum:63

H2XL05              	100.00%		D3BUN0              	100.00%
Bootstrap support for H2XL05 as seed ortholog is 100%.
Bootstrap support for D3BUN0 as seed ortholog is 100%.

Group of orthologs #2137. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.pallidum:62

F6W881              	100.00%		D3B4B0              	100.00%
                    	       		D3B458              	49.02%
Bootstrap support for F6W881 as seed ortholog is 100%.
Bootstrap support for D3B4B0 as seed ortholog is 100%.

Group of orthologs #2138. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.pallidum:62

F6XM37              	100.00%		D3BCT7              	100.00%
Bootstrap support for F6XM37 as seed ortholog is 100%.
Bootstrap support for D3BCT7 as seed ortholog is 100%.

Group of orthologs #2139. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.pallidum:62

H2XMY1              	100.00%		D3B2Y3              	100.00%
Bootstrap support for H2XMY1 as seed ortholog is 100%.
Bootstrap support for D3B2Y3 as seed ortholog is 100%.

Group of orthologs #2140. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 P.pallidum:62

H2Y1B1              	100.00%		D3AWT0              	100.00%
Bootstrap support for H2Y1B1 as seed ortholog is 67%.
Alternative seed ortholog is F6RKZ1 (14 bits away from this cluster)
Bootstrap support for D3AWT0 as seed ortholog is 100%.

Group of orthologs #2141. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.pallidum:62

H2XJN8              	100.00%		D3BPK0              	100.00%
Bootstrap support for H2XJN8 as seed ortholog is 100%.
Bootstrap support for D3BPK0 as seed ortholog is 100%.

Group of orthologs #2142. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 P.pallidum:62

H2XZ38              	100.00%		D3BDA7              	100.00%
Bootstrap support for H2XZ38 as seed ortholog is 100%.
Bootstrap support for D3BDA7 as seed ortholog is 100%.

Group of orthologs #2143. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:61

F7AKC9              	100.00%		D3B723              	100.00%
F6SM21              	26.41%		
F6Q2J0              	21.11%		
H2XSR0              	18.07%		
H2Y1J9              	16.59%		
F6YPX6              	15.90%		
F7A5P0              	15.38%		
F7B7S4              	14.51%		
F6QJJ5              	14.51%		
F6ZYD9              	13.03%		
F6ZXE7              	12.77%		
H2XV00              	12.68%		
F7BC57              	12.51%		
H2Y2Z9              	12.42%		
F6XRF6              	11.82%		
F6Y050              	11.64%		
F6XX55              	11.47%		
F6SR61              	10.51%		
F6WWQ0              	10.34%		
F6Y221              	10.25%		
F6VLL9              	9.90%		
F6U7S8              	9.30%		
F6QXU2              	9.12%		
F6RA21              	8.34%		
F6X1F4              	8.17%		
F6YTZ8              	7.56%		
F6TNK4              	7.12%		
H2XR86              	6.69%		
F6TWK8              	6.60%		
K9J6P7              	6.52%		
H2XX08              	5.82%		
F6WVM4              	5.56%		
Bootstrap support for F7AKC9 as seed ortholog is 100%.
Bootstrap support for D3B723 as seed ortholog is 100%.

Group of orthologs #2144. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:61

F6QH26              	100.00%		D3BQ68              	100.00%
H2XV01              	11.93%		D3B3J4              	29.92%
                    	       		D3B8M4              	29.31%
                    	       		D3BRT6              	26.90%
                    	       		D3BUP4              	24.49%
                    	       		D3BE58              	10.01%
Bootstrap support for F6QH26 as seed ortholog is 100%.
Bootstrap support for D3BQ68 as seed ortholog is 100%.

Group of orthologs #2145. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:61

F6TNT4              	100.00%		D3BCG9              	100.00%
F6YW93              	8.13%		
Bootstrap support for F6TNT4 as seed ortholog is 100%.
Bootstrap support for D3BCG9 as seed ortholog is 100%.

Group of orthologs #2146. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:61

F6WYD9              	100.00%		D3BQG3              	100.00%
                    	       		D3BT40              	56.62%
Bootstrap support for F6WYD9 as seed ortholog is 100%.
Bootstrap support for D3BQG3 as seed ortholog is 100%.

Group of orthologs #2147. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:61

F6U8D6              	100.00%		D3AZW4              	100.00%
Bootstrap support for F6U8D6 as seed ortholog is 100%.
Bootstrap support for D3AZW4 as seed ortholog is 100%.

Group of orthologs #2148. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:61

F6R2C6              	100.00%		D3BPP1              	100.00%
Bootstrap support for F6R2C6 as seed ortholog is 100%.
Bootstrap support for D3BPP1 as seed ortholog is 100%.

Group of orthologs #2149. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:61

F6YWD0              	100.00%		D3BBW5              	100.00%
Bootstrap support for F6YWD0 as seed ortholog is 100%.
Bootstrap support for D3BBW5 as seed ortholog is 100%.

Group of orthologs #2150. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:61

F6W382              	100.00%		D3BMX4              	100.00%
Bootstrap support for F6W382 as seed ortholog is 100%.
Bootstrap support for D3BMX4 as seed ortholog is 100%.

Group of orthologs #2151. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:61

H2Y240              	100.00%		D3B0X2              	100.00%
Bootstrap support for H2Y240 as seed ortholog is 100%.
Bootstrap support for D3B0X2 as seed ortholog is 100%.

Group of orthologs #2152. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:61

H2XL09              	100.00%		D3BHH9              	100.00%
Bootstrap support for H2XL09 as seed ortholog is 100%.
Bootstrap support for D3BHH9 as seed ortholog is 100%.

Group of orthologs #2153. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:61

H2XN89              	100.00%		D3BJD5              	100.00%
Bootstrap support for H2XN89 as seed ortholog is 100%.
Bootstrap support for D3BJD5 as seed ortholog is 100%.

Group of orthologs #2154. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 P.pallidum:61

H2XNI9              	100.00%		D3BP74              	100.00%
Bootstrap support for H2XNI9 as seed ortholog is 100%.
Bootstrap support for D3BP74 as seed ortholog is 100%.

Group of orthologs #2155. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 P.pallidum:61

H2XJJ8              	100.00%		D3BTR5              	100.00%
Bootstrap support for H2XJJ8 as seed ortholog is 76%.
Bootstrap support for D3BTR5 as seed ortholog is 100%.

Group of orthologs #2156. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 P.pallidum:61

Q4H303              	100.00%		D3BI39              	100.00%
Bootstrap support for Q4H303 as seed ortholog is 69%.
Alternative seed ortholog is F7BLR9 (1 bits away from this cluster)
Bootstrap support for D3BI39 as seed ortholog is 100%.

Group of orthologs #2157. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 P.pallidum:60

F6Y1Y9              	100.00%		D3B5Z0              	100.00%
F7BLT9              	19.76%		
F6WU27              	18.05%		
H2XLL1              	12.68%		
Bootstrap support for F6Y1Y9 as seed ortholog is 56%.
Alternative seed ortholog is H2XX17 (4 bits away from this cluster)
Bootstrap support for D3B5Z0 as seed ortholog is 100%.

Group of orthologs #2158. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 P.pallidum:60

F6QIW3              	100.00%		D3B0E5              	100.00%
F6Z3Y4              	100.00%		
Bootstrap support for F6QIW3 as seed ortholog is 65%.
Alternative seed ortholog is F6S095 (4 bits away from this cluster)
Bootstrap support for F6Z3Y4 as seed ortholog is 71%.
Alternative seed ortholog is F6S095 (4 bits away from this cluster)
Bootstrap support for D3B0E5 as seed ortholog is 100%.

Group of orthologs #2159. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.pallidum:60

F6SN53              	100.00%		D3BLB7              	100.00%
                    	       		D3BEB8              	8.77%
Bootstrap support for F6SN53 as seed ortholog is 100%.
Bootstrap support for D3BLB7 as seed ortholog is 100%.

Group of orthologs #2160. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.pallidum:60

F6V899              	100.00%		D3BME2              	100.00%
                    	       		D3B2W1              	21.44%
Bootstrap support for F6V899 as seed ortholog is 100%.
Bootstrap support for D3BME2 as seed ortholog is 100%.

Group of orthologs #2161. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.pallidum:60

H2XKN7              	100.00%		D3AVT4              	100.00%
Bootstrap support for H2XKN7 as seed ortholog is 100%.
Bootstrap support for D3AVT4 as seed ortholog is 100%.

Group of orthologs #2162. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.pallidum:60

H2XK74              	100.00%		D3B0H9              	100.00%
Bootstrap support for H2XK74 as seed ortholog is 100%.
Bootstrap support for D3B0H9 as seed ortholog is 100%.

Group of orthologs #2163. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 P.pallidum:60

H2XPZ5              	100.00%		D3BTG7              	100.00%
Bootstrap support for H2XPZ5 as seed ortholog is 100%.
Bootstrap support for D3BTG7 as seed ortholog is 100%.

Group of orthologs #2164. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.pallidum:59

F6SYI7              	100.00%		D3AWS9              	100.00%
                    	       		D3AWT1              	41.37%
                    	       		D3BF39              	39.58%
                    	       		D3BEF0              	19.64%
Bootstrap support for F6SYI7 as seed ortholog is 100%.
Bootstrap support for D3AWS9 as seed ortholog is 100%.

Group of orthologs #2165. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.pallidum:59

H2XY24              	100.00%		D3BPE0              	100.00%
H2Y3A1              	100.00%		
Bootstrap support for H2XY24 as seed ortholog is 100%.
Bootstrap support for H2Y3A1 as seed ortholog is 100%.
Bootstrap support for D3BPE0 as seed ortholog is 100%.

Group of orthologs #2166. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 P.pallidum:59

F6R9Y6              	100.00%		D3B9U2              	100.00%
Bootstrap support for F6R9Y6 as seed ortholog is 70%.
Alternative seed ortholog is H2XZX7 (14 bits away from this cluster)
Bootstrap support for D3B9U2 as seed ortholog is 100%.

Group of orthologs #2167. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.pallidum:59

F6V2H0              	100.00%		D3B7L3              	100.00%
Bootstrap support for F6V2H0 as seed ortholog is 100%.
Bootstrap support for D3B7L3 as seed ortholog is 100%.

Group of orthologs #2168. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.pallidum:59

F6YVL2              	100.00%		D3B2V1              	100.00%
Bootstrap support for F6YVL2 as seed ortholog is 100%.
Bootstrap support for D3B2V1 as seed ortholog is 100%.

Group of orthologs #2169. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.pallidum:59

F6Y4F7              	100.00%		D3B7J5              	100.00%
Bootstrap support for F6Y4F7 as seed ortholog is 100%.
Bootstrap support for D3B7J5 as seed ortholog is 100%.

Group of orthologs #2170. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.pallidum:59

F6XTM9              	100.00%		D3B9Z2              	100.00%
Bootstrap support for F6XTM9 as seed ortholog is 100%.
Bootstrap support for D3B9Z2 as seed ortholog is 100%.

Group of orthologs #2171. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.pallidum:59

F6YNK9              	100.00%		D3BU69              	100.00%
Bootstrap support for F6YNK9 as seed ortholog is 100%.
Bootstrap support for D3BU69 as seed ortholog is 100%.

Group of orthologs #2172. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 P.pallidum:59

H2XUK0              	100.00%		D3BU08              	100.00%
Bootstrap support for H2XUK0 as seed ortholog is 100%.
Bootstrap support for D3BU08 as seed ortholog is 100%.

Group of orthologs #2173. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.pallidum:58

H2Y1S1              	100.00%		D3B9W3              	100.00%
                    	       		D3BHY0              	39.75%
                    	       		D3BHY7              	33.85%
Bootstrap support for H2Y1S1 as seed ortholog is 100%.
Bootstrap support for D3B9W3 as seed ortholog is 100%.

Group of orthologs #2174. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.pallidum:58

F6UP59              	100.00%		D3AZ91              	100.00%
Bootstrap support for F6UP59 as seed ortholog is 100%.
Bootstrap support for D3AZ91 as seed ortholog is 100%.

Group of orthologs #2175. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 P.pallidum:58

H2XKD8              	100.00%		D3BJI3              	100.00%
Bootstrap support for H2XKD8 as seed ortholog is 100%.
Bootstrap support for D3BJI3 as seed ortholog is 100%.

Group of orthologs #2176. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:57

H2XWF3              	100.00%		D3B7G7              	100.00%
F6ZST9              	100.00%		D3B7G5              	100.00%
F6ZCN2              	45.57%		D3B7G4              	44.96%
F6WJT4              	14.78%		D3B7G6              	38.05%
F6Y782              	12.48%		
F6T0V1              	10.10%		
H2XV23              	9.69%		
F7AXQ6              	9.00%		
F6VN69              	8.73%		
F6TL82              	8.32%		
H2XVY9              	7.87%		
H2XMT1              	6.53%		
F6R5Y6              	6.53%		
Bootstrap support for H2XWF3 as seed ortholog is 100%.
Bootstrap support for F6ZST9 as seed ortholog is 100%.
Bootstrap support for D3B7G7 as seed ortholog is 100%.
Bootstrap support for D3B7G5 as seed ortholog is 100%.

Group of orthologs #2177. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:57

F6Z8B6              	51.57%		D3BEY7              	100.00%
F6WRW7              	100.00%		D3BJJ7              	100.00%
F6XUL4              	30.36%		
F7AE92              	24.82%		
F6RAJ1              	21.69%		
Bootstrap support for F6WRW7 as seed ortholog is 100%.
Bootstrap support for D3BEY7 as seed ortholog is 100%.
Bootstrap support for D3BJJ7 as seed ortholog is 100%.

Group of orthologs #2178. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:57

F6X8W4              	100.00%		D3BIM2              	100.00%
F6V0N3              	11.25%		
F6YCW2              	9.58%		
F6ZUZ5              	9.13%		
F7AQZ5              	6.24%		
F7AR10              	5.01%		
Bootstrap support for F6X8W4 as seed ortholog is 100%.
Bootstrap support for D3BIM2 as seed ortholog is 100%.

Group of orthologs #2179. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:57

H2XQD2              	100.00%		D3BQ72              	100.00%
H2XZI8              	33.64%		D3B9K5              	41.22%
H2XVI2              	30.86%		D3BL18              	15.48%
F7AVL3              	21.35%		
Bootstrap support for H2XQD2 as seed ortholog is 100%.
Bootstrap support for D3BQ72 as seed ortholog is 100%.

Group of orthologs #2180. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:57

F6UA25              	100.00%		D3BJ51              	100.00%
Bootstrap support for F6UA25 as seed ortholog is 100%.
Bootstrap support for D3BJ51 as seed ortholog is 100%.

Group of orthologs #2181. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:57

F6Z6N2              	100.00%		D3BF56              	100.00%
Bootstrap support for F6Z6N2 as seed ortholog is 100%.
Bootstrap support for D3BF56 as seed ortholog is 100%.

Group of orthologs #2182. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:57

H2XQR9              	100.00%		D3B4A6              	100.00%
Bootstrap support for H2XQR9 as seed ortholog is 100%.
Bootstrap support for D3B4A6 as seed ortholog is 100%.

Group of orthologs #2183. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:57

H2XT41              	100.00%		D3B3R8              	100.00%
Bootstrap support for H2XT41 as seed ortholog is 100%.
Bootstrap support for D3B3R8 as seed ortholog is 100%.

Group of orthologs #2184. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:57

F6Y9P8              	100.00%		D3BTI0              	100.00%
Bootstrap support for F6Y9P8 as seed ortholog is 100%.
Bootstrap support for D3BTI0 as seed ortholog is 100%.

Group of orthologs #2185. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:7

H2XTT8              	100.00%		D3BEB9              	100.00%
Bootstrap support for H2XTT8 as seed ortholog is 100%.
Bootstrap support for D3BEB9 as seed ortholog is 66%.
Alternative seed ortholog is D3B3Z9 (7 bits away from this cluster)

Group of orthologs #2186. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:57

H2XYK0              	100.00%		D3BEI4              	100.00%
Bootstrap support for H2XYK0 as seed ortholog is 100%.
Bootstrap support for D3BEI4 as seed ortholog is 100%.

Group of orthologs #2187. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 P.pallidum:57

Q8T885              	100.00%		D3BQM2              	100.00%
Bootstrap support for Q8T885 as seed ortholog is 100%.
Bootstrap support for D3BQM2 as seed ortholog is 100%.

Group of orthologs #2188. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:56

F6V2P6              	100.00%		D3B6G6              	100.00%
H2XKU8              	5.99%		
Bootstrap support for F6V2P6 as seed ortholog is 100%.
Bootstrap support for D3B6G6 as seed ortholog is 100%.

Group of orthologs #2189. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:10

H2XPB7              	100.00%		D3B3Y7              	100.00%
F6XSD8              	72.12%		
Bootstrap support for H2XPB7 as seed ortholog is 100%.
Bootstrap support for D3B3Y7 as seed ortholog is 71%.
Alternative seed ortholog is D3AY54 (10 bits away from this cluster)

Group of orthologs #2190. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:56

F6QFI4              	100.00%		D3AY52              	100.00%
Bootstrap support for F6QFI4 as seed ortholog is 100%.
Bootstrap support for D3AY52 as seed ortholog is 100%.

Group of orthologs #2191. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:56

F6QDF2              	100.00%		D3B0M7              	100.00%
Bootstrap support for F6QDF2 as seed ortholog is 100%.
Bootstrap support for D3B0M7 as seed ortholog is 100%.

Group of orthologs #2192. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:56

F6S9U6              	100.00%		D3B292              	100.00%
Bootstrap support for F6S9U6 as seed ortholog is 100%.
Bootstrap support for D3B292 as seed ortholog is 100%.

Group of orthologs #2193. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:56

F6Y206              	100.00%		D3B7V3              	100.00%
Bootstrap support for F6Y206 as seed ortholog is 100%.
Bootstrap support for D3B7V3 as seed ortholog is 100%.

Group of orthologs #2194. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:56

F6S8F6              	100.00%		D3BKN9              	100.00%
Bootstrap support for F6S8F6 as seed ortholog is 100%.
Bootstrap support for D3BKN9 as seed ortholog is 100%.

Group of orthologs #2195. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:56

F6YBL5              	100.00%		D3BBI5              	100.00%
Bootstrap support for F6YBL5 as seed ortholog is 100%.
Bootstrap support for D3BBI5 as seed ortholog is 100%.

Group of orthologs #2196. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:56

H2XP03              	100.00%		D3B149              	100.00%
Bootstrap support for H2XP03 as seed ortholog is 100%.
Bootstrap support for D3B149 as seed ortholog is 100%.

Group of orthologs #2197. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:56

F6Z0W4              	100.00%		D3BHQ4              	100.00%
Bootstrap support for F6Z0W4 as seed ortholog is 100%.
Bootstrap support for D3BHQ4 as seed ortholog is 100%.

Group of orthologs #2198. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:56

F6YWH4              	100.00%		D3BQF3              	100.00%
Bootstrap support for F6YWH4 as seed ortholog is 100%.
Bootstrap support for D3BQF3 as seed ortholog is 100%.

Group of orthologs #2199. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:56

F6ZBR4              	100.00%		D3BPW5              	100.00%
Bootstrap support for F6ZBR4 as seed ortholog is 100%.
Bootstrap support for D3BPW5 as seed ortholog is 100%.

Group of orthologs #2200. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 P.pallidum:56

H2Y2X6              	100.00%		D3B5L6              	100.00%
Bootstrap support for H2Y2X6 as seed ortholog is 100%.
Bootstrap support for D3B5L6 as seed ortholog is 100%.

Group of orthologs #2201. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.pallidum:55

H2XQ86              	100.00%		D3BJW9              	100.00%
H2XNU9              	34.80%		
Bootstrap support for H2XQ86 as seed ortholog is 100%.
Bootstrap support for D3BJW9 as seed ortholog is 100%.

Group of orthologs #2202. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.pallidum:55

F6QH43              	100.00%		D3AYJ8              	100.00%
Bootstrap support for F6QH43 as seed ortholog is 100%.
Bootstrap support for D3AYJ8 as seed ortholog is 100%.

Group of orthologs #2203. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.pallidum:55

F6YHQ3              	100.00%		D3BHA9              	100.00%
Bootstrap support for F6YHQ3 as seed ortholog is 100%.
Bootstrap support for D3BHA9 as seed ortholog is 100%.

Group of orthologs #2204. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 P.pallidum:55

H2XXZ8              	100.00%		D3BBR3              	100.00%
Bootstrap support for H2XXZ8 as seed ortholog is 100%.
Bootstrap support for D3BBR3 as seed ortholog is 100%.

Group of orthologs #2205. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.pallidum:54

H2XM31              	100.00%		D3B642              	100.00%
                    	       		D3B3P0              	50.00%
                    	       		D3BLB6              	45.05%
                    	       		D3BLB5              	32.18%
                    	       		D3BHX0              	10.89%
Bootstrap support for H2XM31 as seed ortholog is 100%.
Bootstrap support for D3B642 as seed ortholog is 100%.

Group of orthologs #2206. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.pallidum:54

H2XN29              	100.00%		D3B5D5              	100.00%
H2XZY0              	25.62%		
Bootstrap support for H2XN29 as seed ortholog is 100%.
Bootstrap support for D3B5D5 as seed ortholog is 100%.

Group of orthologs #2207. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.pallidum:54

F6XWU5              	100.00%		D3BGD1              	100.00%
Bootstrap support for F6XWU5 as seed ortholog is 100%.
Bootstrap support for D3BGD1 as seed ortholog is 100%.

Group of orthologs #2208. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 P.pallidum:54

F6WTV6              	100.00%		D3BMF1              	100.00%
Bootstrap support for F6WTV6 as seed ortholog is 100%.
Bootstrap support for D3BMF1 as seed ortholog is 100%.

Group of orthologs #2209. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 P.pallidum:54

F6ZW77              	100.00%		D3BSD5              	100.00%
Bootstrap support for F6ZW77 as seed ortholog is 50%.
Alternative seed ortholog is H2Y2Q4 (4 bits away from this cluster)
Bootstrap support for D3BSD5 as seed ortholog is 100%.

Group of orthologs #2210. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.pallidum:53

F6RM26              	100.00%		D3BTZ8              	100.00%
                    	       		D3BTU6              	25.42%
                    	       		D3BTU5              	24.58%
                    	       		D3BMV8              	11.46%
Bootstrap support for F6RM26 as seed ortholog is 100%.
Bootstrap support for D3BTZ8 as seed ortholog is 100%.

Group of orthologs #2211. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.pallidum:53

F6SD13              	100.00%		D3B2B2              	100.00%
Bootstrap support for F6SD13 as seed ortholog is 100%.
Bootstrap support for D3B2B2 as seed ortholog is 100%.

Group of orthologs #2212. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.pallidum:10

F6WSD2              	100.00%		D3B3B9              	100.00%
Bootstrap support for F6WSD2 as seed ortholog is 100%.
Bootstrap support for D3B3B9 as seed ortholog is 46%.
Alternative seed ortholog is D3BAH4 (10 bits away from this cluster)

Group of orthologs #2213. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.pallidum:53

F6XSG2              	100.00%		D3BAP9              	100.00%
Bootstrap support for F6XSG2 as seed ortholog is 100%.
Bootstrap support for D3BAP9 as seed ortholog is 100%.

Group of orthologs #2214. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 P.pallidum:53

F7AQV0              	100.00%		D3BSI8              	100.00%
Bootstrap support for F7AQV0 as seed ortholog is 100%.
Bootstrap support for D3BSI8 as seed ortholog is 100%.

Group of orthologs #2215. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.pallidum:52

F6Q3Z9              	100.00%		D3B3D1              	100.00%
                    	       		D3AYP7              	14.03%
                    	       		D3BMY6              	12.57%
                    	       		D3BI74              	7.65%
                    	       		D3BQX8              	7.38%
                    	       		D3BB56              	7.01%
                    	       		D3B0X4              	6.28%
                    	       		D3BHD3              	5.65%
                    	       		D3BIV0              	5.28%
Bootstrap support for F6Q3Z9 as seed ortholog is 100%.
Bootstrap support for D3B3D1 as seed ortholog is 100%.

Group of orthologs #2216. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.pallidum:52

H2Y2W0              	100.00%		D3B0L7              	100.00%
H2XKL8              	50.64%		
H2XTT4              	35.26%		
H2XMD1              	34.94%		
H2Y3D0              	34.94%		
F6SQ89              	33.01%		
L7N0V0              	33.01%		
H2XNT9              	22.12%		
Bootstrap support for H2Y2W0 as seed ortholog is 100%.
Bootstrap support for D3B0L7 as seed ortholog is 100%.

Group of orthologs #2217. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.pallidum:52

Q4H3W1              	100.00%		D3BU99              	100.00%
                    	       		D3BIM3              	7.66%
Bootstrap support for Q4H3W1 as seed ortholog is 100%.
Bootstrap support for D3BU99 as seed ortholog is 100%.

Group of orthologs #2218. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.pallidum:52

F6XFL4              	100.00%		D3AYC0              	100.00%
Bootstrap support for F6XFL4 as seed ortholog is 100%.
Bootstrap support for D3AYC0 as seed ortholog is 100%.

Group of orthologs #2219. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.pallidum:52

F6SKV4              	100.00%		D3BHP4              	100.00%
Bootstrap support for F6SKV4 as seed ortholog is 100%.
Bootstrap support for D3BHP4 as seed ortholog is 100%.

Group of orthologs #2220. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.pallidum:52

H2XWJ8              	100.00%		D3AVK7              	100.00%
Bootstrap support for H2XWJ8 as seed ortholog is 100%.
Bootstrap support for D3AVK7 as seed ortholog is 100%.

Group of orthologs #2221. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.pallidum:52

F6YYA5              	100.00%		D3BJL0              	100.00%
Bootstrap support for F6YYA5 as seed ortholog is 100%.
Bootstrap support for D3BJL0 as seed ortholog is 100%.

Group of orthologs #2222. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.pallidum:52

H2XP55              	100.00%		D3BC47              	100.00%
Bootstrap support for H2XP55 as seed ortholog is 100%.
Bootstrap support for D3BC47 as seed ortholog is 100%.

Group of orthologs #2223. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 P.pallidum:52

Q1RL63              	100.00%		D3B385              	100.00%
Bootstrap support for Q1RL63 as seed ortholog is 100%.
Bootstrap support for D3B385 as seed ortholog is 100%.

Group of orthologs #2224. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.pallidum:51

L7N0Q6              	100.00%		D3B5W5              	100.00%
H2XQC4              	36.86%		
H2Y0J1              	33.67%		
H2Y0T7              	33.27%		
F6VG23              	32.97%		
F6ZQX2              	27.57%		
F7AWP7              	24.88%		
H2XYI9              	20.18%		
F6XS35              	18.98%		
F6TBU9              	13.69%		
F7B9A3              	11.49%		
H2XYH4              	9.59%		
H2XPR6              	9.39%		
H2XN34              	9.09%		
F7A8D3              	5.49%		
Bootstrap support for L7N0Q6 as seed ortholog is 100%.
Bootstrap support for D3B5W5 as seed ortholog is 100%.

Group of orthologs #2225. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.pallidum:51

F6PXZ5              	100.00%		D3B9E2              	100.00%
Bootstrap support for F6PXZ5 as seed ortholog is 100%.
Bootstrap support for D3B9E2 as seed ortholog is 100%.

Group of orthologs #2226. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.pallidum:51

F6TBF1              	100.00%		D3B640              	100.00%
Bootstrap support for F6TBF1 as seed ortholog is 100%.
Bootstrap support for D3B640 as seed ortholog is 100%.

Group of orthologs #2227. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.pallidum:51

F6Q539              	100.00%		D3BEB1              	100.00%
Bootstrap support for F6Q539 as seed ortholog is 100%.
Bootstrap support for D3BEB1 as seed ortholog is 100%.

Group of orthologs #2228. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 P.pallidum:51

H2XWK0              	100.00%		D3B012              	100.00%
Bootstrap support for H2XWK0 as seed ortholog is 100%.
Bootstrap support for D3B012 as seed ortholog is 100%.

Group of orthologs #2229. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.pallidum:50

F6QMA7              	100.00%		D3BNQ6              	100.00%
H2XPQ4              	46.27%		
Bootstrap support for F6QMA7 as seed ortholog is 100%.
Bootstrap support for D3BNQ6 as seed ortholog is 100%.

Group of orthologs #2230. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.pallidum:50

F6W1Z3              	100.00%		D3BAQ0              	100.00%
Bootstrap support for F6W1Z3 as seed ortholog is 100%.
Bootstrap support for D3BAQ0 as seed ortholog is 100%.

Group of orthologs #2231. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.pallidum:50

F6ZA28              	100.00%		D3B659              	100.00%
Bootstrap support for F6ZA28 as seed ortholog is 100%.
Bootstrap support for D3B659 as seed ortholog is 100%.

Group of orthologs #2232. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.pallidum:50

F6TBA1              	100.00%		D3BM89              	100.00%
Bootstrap support for F6TBA1 as seed ortholog is 100%.
Bootstrap support for D3BM89 as seed ortholog is 100%.

Group of orthologs #2233. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.pallidum:50

F6TZ23              	100.00%		D3BSJ3              	100.00%
Bootstrap support for F6TZ23 as seed ortholog is 100%.
Bootstrap support for D3BSJ3 as seed ortholog is 100%.

Group of orthologs #2234. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 P.pallidum:50

H2XLM7              	100.00%		D3BB05              	100.00%
Bootstrap support for H2XLM7 as seed ortholog is 100%.
Bootstrap support for D3BB05 as seed ortholog is 100%.

Group of orthologs #2235. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.pallidum:49

F6UBE7              	100.00%		D3BTA8              	100.00%
F7A2L3              	11.43%		D3BTA5              	51.73%
F8WQ81              	10.98%		D3BBK2              	17.65%
F6US70              	9.91%		
H2XXT4              	7.62%		
F6SR80              	7.32%		
F6QK47              	6.10%		
Bootstrap support for F6UBE7 as seed ortholog is 100%.
Bootstrap support for D3BTA8 as seed ortholog is 100%.

Group of orthologs #2236. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.pallidum:49

F6ZNX5              	100.00%		D3B5Y5              	100.00%
H2Y0F5              	38.14%		
Bootstrap support for F6ZNX5 as seed ortholog is 100%.
Bootstrap support for D3B5Y5 as seed ortholog is 100%.

Group of orthologs #2237. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.pallidum:49

F6YVR5              	100.00%		D3BA35              	100.00%
                    	       		D3BA73              	27.11%
Bootstrap support for F6YVR5 as seed ortholog is 100%.
Bootstrap support for D3BA35 as seed ortholog is 100%.

Group of orthologs #2238. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.pallidum:49

F6SCR3              	100.00%		D3AVJ5              	100.00%
Bootstrap support for F6SCR3 as seed ortholog is 100%.
Bootstrap support for D3AVJ5 as seed ortholog is 100%.

Group of orthologs #2239. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.pallidum:49

F6WJ25              	100.00%		D3BDZ5              	100.00%
Bootstrap support for F6WJ25 as seed ortholog is 100%.
Bootstrap support for D3BDZ5 as seed ortholog is 100%.

Group of orthologs #2240. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.pallidum:49

F6YVG2              	100.00%		D3BGF0              	100.00%
Bootstrap support for F6YVG2 as seed ortholog is 100%.
Bootstrap support for D3BGF0 as seed ortholog is 100%.

Group of orthologs #2241. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 P.pallidum:49

H2Y3J5              	100.00%		D3BDA8              	100.00%
Bootstrap support for H2Y3J5 as seed ortholog is 100%.
Bootstrap support for D3BDA8 as seed ortholog is 100%.

Group of orthologs #2242. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 P.pallidum:3

H2Y2J9              	100.00%		D3BSS8              	100.00%
H2XKI7              	48.46%		
H2XTS1              	46.15%		
F6XJL4              	45.38%		
F6WV34              	32.69%		
F6SHC7              	25.00%		
F6TAU3              	7.69%		
Bootstrap support for H2Y2J9 as seed ortholog is 100%.
Bootstrap support for D3BSS8 as seed ortholog is 53%.
Alternative seed ortholog is D3BKW5 (3 bits away from this cluster)

Group of orthologs #2243. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 P.pallidum:48

F6XQP8              	100.00%		D3BJY0              	100.00%
                    	       		D3BRA6              	33.46%
Bootstrap support for F6XQP8 as seed ortholog is 100%.
Bootstrap support for D3BJY0 as seed ortholog is 100%.

Group of orthologs #2244. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 P.pallidum:48

F6SFZ9              	100.00%		D3BG62              	100.00%
Bootstrap support for F6SFZ9 as seed ortholog is 100%.
Bootstrap support for D3BG62 as seed ortholog is 100%.

Group of orthologs #2245. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 P.pallidum:48

F6SUV6              	100.00%		D3BJD1              	100.00%
Bootstrap support for F6SUV6 as seed ortholog is 100%.
Bootstrap support for D3BJD1 as seed ortholog is 100%.

Group of orthologs #2246. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 P.pallidum:48

H2XTT0              	100.00%		D3BGB3              	100.00%
Bootstrap support for H2XTT0 as seed ortholog is 100%.
Bootstrap support for D3BGB3 as seed ortholog is 100%.

Group of orthologs #2247. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:47

F6RNA2              	100.00%		D3BUN4              	100.00%
H2XKE6              	19.51%		D3B4D8              	23.61%
F6VYQ8              	18.27%		
H2XT31              	17.04%		
H2XWY6              	16.54%		
H2XUU0              	15.06%		
F6RK63              	14.57%		
H2XY59              	13.33%		
F6YWW0              	12.84%		
F6PMW1              	12.59%		
F6V0S1              	12.59%		
F6Q929              	12.59%		
F6UYV3              	10.62%		
F6U6H9              	10.37%		
H2XLP1              	9.38%		
F6XXQ7              	7.90%		
Bootstrap support for F6RNA2 as seed ortholog is 100%.
Bootstrap support for D3BUN4 as seed ortholog is 100%.

Group of orthologs #2248. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:47

F7AY96              	100.00%		D3BVL3              	100.00%
F7AUP3              	90.87%		
F7AV59              	69.93%		
L7N0S5              	69.04%		
F6ZYU1              	48.78%		
Bootstrap support for F7AY96 as seed ortholog is 100%.
Bootstrap support for D3BVL3 as seed ortholog is 100%.

Group of orthologs #2249. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:47

F6U176              	100.00%		D3BHE1              	100.00%
F6XA69              	62.68%		
F6VAC9              	47.42%		
Bootstrap support for F6U176 as seed ortholog is 100%.
Bootstrap support for D3BHE1 as seed ortholog is 100%.

Group of orthologs #2250. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:47

F7ADG5              	100.00%		D3BL89              	100.00%
F6Y9G9              	93.95%		
Bootstrap support for F7ADG5 as seed ortholog is 100%.
Bootstrap support for D3BL89 as seed ortholog is 100%.

Group of orthologs #2251. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:47

H2Y196              	100.00%		D3B2Q2              	100.00%
F6Y6V2              	7.24%		
Bootstrap support for H2Y196 as seed ortholog is 100%.
Bootstrap support for D3B2Q2 as seed ortholog is 100%.

Group of orthologs #2252. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:47

H2XRC4              	100.00%		D3BFK0              	100.00%
                    	       		D3B4R6              	23.70%
Bootstrap support for H2XRC4 as seed ortholog is 100%.
Bootstrap support for D3BFK0 as seed ortholog is 100%.

Group of orthologs #2253. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:47

H2XUJ7              	100.00%		D3B6P6              	100.00%
Bootstrap support for H2XUJ7 as seed ortholog is 100%.
Bootstrap support for D3B6P6 as seed ortholog is 100%.

Group of orthologs #2254. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 P.pallidum:47

Q4H2R3              	100.00%		D3AXV5              	100.00%
Bootstrap support for Q4H2R3 as seed ortholog is 100%.
Bootstrap support for D3AXV5 as seed ortholog is 100%.

Group of orthologs #2255. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.pallidum:46

F6UNF1              	100.00%		D3BVR2              	100.00%
H2XY02              	20.48%		D3BSZ2              	11.56%
H2XMI0              	15.02%		
F6QBW9              	12.29%		
Bootstrap support for F6UNF1 as seed ortholog is 100%.
Bootstrap support for D3BVR2 as seed ortholog is 100%.

Group of orthologs #2256. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 P.pallidum:46

H2Y0K8              	100.00%		D3B401              	100.00%
Bootstrap support for H2Y0K8 as seed ortholog is 100%.
Bootstrap support for D3B401 as seed ortholog is 100%.

Group of orthologs #2257. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.pallidum:45

F6TL06              	100.00%		D3AW78              	100.00%
F6R9K5              	31.70%		
F6Y7G2              	29.64%		
F6WRM0              	28.61%		
H2XZY4              	23.97%		
F6WXQ7              	10.31%		
H2XWQ1              	10.31%		
Bootstrap support for F6TL06 as seed ortholog is 100%.
Bootstrap support for D3AW78 as seed ortholog is 100%.

Group of orthologs #2258. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.pallidum:45

H2XKC2              	100.00%		D3B830              	100.00%
                    	       		D3BBF4              	26.65%
Bootstrap support for H2XKC2 as seed ortholog is 100%.
Bootstrap support for D3B830 as seed ortholog is 100%.

Group of orthologs #2259. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.pallidum:45

F6X6H9              	100.00%		D3B0Y6              	100.00%
Bootstrap support for F6X6H9 as seed ortholog is 100%.
Bootstrap support for D3B0Y6 as seed ortholog is 100%.

Group of orthologs #2260. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.pallidum:45

F6WFK7              	100.00%		D3B611              	100.00%
Bootstrap support for F6WFK7 as seed ortholog is 100%.
Bootstrap support for D3B611 as seed ortholog is 100%.

Group of orthologs #2261. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.pallidum:45

H2XKP2              	100.00%		D3AWC5              	100.00%
Bootstrap support for H2XKP2 as seed ortholog is 100%.
Bootstrap support for D3AWC5 as seed ortholog is 100%.

Group of orthologs #2262. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.pallidum:45

F6Y7L6              	100.00%		D3BER3              	100.00%
Bootstrap support for F6Y7L6 as seed ortholog is 100%.
Bootstrap support for D3BER3 as seed ortholog is 100%.

Group of orthologs #2263. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.pallidum:45

H2XLI1              	100.00%		D3B535              	100.00%
Bootstrap support for H2XLI1 as seed ortholog is 100%.
Bootstrap support for D3B535 as seed ortholog is 100%.

Group of orthologs #2264. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.pallidum:45

F6X0R0              	100.00%		D3BJA2              	100.00%
Bootstrap support for F6X0R0 as seed ortholog is 100%.
Bootstrap support for D3BJA2 as seed ortholog is 100%.

Group of orthologs #2265. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.pallidum:45

H2XT36              	100.00%		D3B9L1              	100.00%
Bootstrap support for H2XT36 as seed ortholog is 100%.
Bootstrap support for D3B9L1 as seed ortholog is 100%.

Group of orthologs #2266. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 P.pallidum:45

H2XZW2              	100.00%		D3BKA6              	100.00%
Bootstrap support for H2XZW2 as seed ortholog is 100%.
Bootstrap support for D3BKA6 as seed ortholog is 100%.

Group of orthologs #2267. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.pallidum:44

F6WAE5              	100.00%		D3BKS2              	100.00%
                    	       		D3AYJ4              	9.27%
                    	       		D3B9X9              	7.14%
Bootstrap support for F6WAE5 as seed ortholog is 100%.
Bootstrap support for D3BKS2 as seed ortholog is 100%.

Group of orthologs #2268. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 P.pallidum:44

H2XW02              	100.00%		D3BUE2              	100.00%
Bootstrap support for H2XW02 as seed ortholog is 100%.
Bootstrap support for D3BUE2 as seed ortholog is 100%.

Group of orthologs #2269. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 P.pallidum:43

F6Y5E2              	100.00%		D3AYF0              	100.00%
Bootstrap support for F6Y5E2 as seed ortholog is 100%.
Bootstrap support for D3AYF0 as seed ortholog is 100%.

Group of orthologs #2270. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 P.pallidum:43

H2XN49              	100.00%		D3BQ44              	100.00%
Bootstrap support for H2XN49 as seed ortholog is 100%.
Bootstrap support for D3BQ44 as seed ortholog is 100%.

Group of orthologs #2271. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.pallidum:42

F6PML6              	100.00%		D3BBR4              	100.00%
Bootstrap support for F6PML6 as seed ortholog is 100%.
Bootstrap support for D3BBR4 as seed ortholog is 100%.

Group of orthologs #2272. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.pallidum:42

F6WYJ4              	100.00%		D3BHR8              	100.00%
Bootstrap support for F6WYJ4 as seed ortholog is 100%.
Bootstrap support for D3BHR8 as seed ortholog is 100%.

Group of orthologs #2273. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.pallidum:42

H2XZ46              	100.00%		D3B335              	100.00%
Bootstrap support for H2XZ46 as seed ortholog is 100%.
Bootstrap support for D3B335 as seed ortholog is 100%.

Group of orthologs #2274. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.pallidum:42

H2XXK2              	100.00%		D3BAI6              	100.00%
Bootstrap support for H2XXK2 as seed ortholog is 100%.
Bootstrap support for D3BAI6 as seed ortholog is 100%.

Group of orthologs #2275. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 P.pallidum:42

H2Y1V1              	100.00%		D3BC08              	100.00%
Bootstrap support for H2Y1V1 as seed ortholog is 100%.
Bootstrap support for D3BC08 as seed ortholog is 100%.

Group of orthologs #2276. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.pallidum:41

H2Y3U2              	100.00%		D3BGG1              	100.00%
                    	       		D3BR20              	52.94%
Bootstrap support for H2Y3U2 as seed ortholog is 100%.
Bootstrap support for D3BGG1 as seed ortholog is 100%.

Group of orthologs #2277. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.pallidum:41

H2XP78              	100.00%		D3BDV3              	100.00%
Bootstrap support for H2XP78 as seed ortholog is 100%.
Bootstrap support for D3BDV3 as seed ortholog is 100%.

Group of orthologs #2278. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.pallidum:41

H2XSB5              	100.00%		D3BAX1              	100.00%
Bootstrap support for H2XSB5 as seed ortholog is 100%.
Bootstrap support for D3BAX1 as seed ortholog is 100%.

Group of orthologs #2279. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.pallidum:41

H2XSV0              	100.00%		D3BD68              	100.00%
Bootstrap support for H2XSV0 as seed ortholog is 100%.
Bootstrap support for D3BD68 as seed ortholog is 100%.

Group of orthologs #2280. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 P.pallidum:41

H2XKT7              	100.00%		D3BMC7              	100.00%
Bootstrap support for H2XKT7 as seed ortholog is 100%.
Bootstrap support for D3BMC7 as seed ortholog is 100%.