###################################
5049 groups of orthologs
5495 in-paralogs from C.intestinalis
6981 in-paralogs from G.gallus
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 6194 bits
Score difference with first non-orthologous sequence - C.intestinalis:1084 G.gallus:723

H2XPC8              	100.00%		F1NHE5              	100.00%
Bootstrap support for H2XPC8 as seed ortholog is 100%.
Bootstrap support for F1NHE5 as seed ortholog is 100%.

Group of orthologs #2. Best score 6164 bits
Score difference with first non-orthologous sequence - C.intestinalis:1047 G.gallus:640

F6V620              	100.00%		F1NML0              	100.00%
Bootstrap support for F6V620 as seed ortholog is 100%.
Bootstrap support for F1NML0 as seed ortholog is 100%.

Group of orthologs #3. Best score 6081 bits
Score difference with first non-orthologous sequence - C.intestinalis:663 G.gallus:3951

F7AU91              	100.00%		F1NI32              	100.00%
Bootstrap support for F7AU91 as seed ortholog is 100%.
Bootstrap support for F1NI32 as seed ortholog is 100%.

Group of orthologs #4. Best score 5003 bits
Score difference with first non-orthologous sequence - C.intestinalis:5003 G.gallus:5003

H2XSF3              	100.00%		F1NLZ9              	100.00%
                    	       		F1NSR9              	37.76%
Bootstrap support for H2XSF3 as seed ortholog is 100%.
Bootstrap support for F1NLZ9 as seed ortholog is 100%.

Group of orthologs #5. Best score 4193 bits
Score difference with first non-orthologous sequence - C.intestinalis:4193 G.gallus:4193

H2XZ27              	100.00%		F1NYR0              	100.00%
Bootstrap support for H2XZ27 as seed ortholog is 100%.
Bootstrap support for F1NYR0 as seed ortholog is 100%.

Group of orthologs #6. Best score 4108 bits
Score difference with first non-orthologous sequence - C.intestinalis:2880 G.gallus:2614

F6ZKS0              	100.00%		E1C9F0              	100.00%
Bootstrap support for F6ZKS0 as seed ortholog is 100%.
Bootstrap support for E1C9F0 as seed ortholog is 100%.

Group of orthologs #7. Best score 3918 bits
Score difference with first non-orthologous sequence - C.intestinalis:3918 G.gallus:3364

F6ZIS0              	100.00%		H9KZA3              	100.00%
Bootstrap support for F6ZIS0 as seed ortholog is 100%.
Bootstrap support for H9KZA3 as seed ortholog is 100%.

Group of orthologs #8. Best score 3783 bits
Score difference with first non-orthologous sequence - C.intestinalis:3783 G.gallus:3783

F6RF18              	100.00%		F1NZ77              	100.00%
Bootstrap support for F6RF18 as seed ortholog is 100%.
Bootstrap support for F1NZ77 as seed ortholog is 100%.

Group of orthologs #9. Best score 3168 bits
Score difference with first non-orthologous sequence - C.intestinalis:3168 G.gallus:3168

F6RL41              	100.00%		E1C796              	100.00%
Bootstrap support for F6RL41 as seed ortholog is 100%.
Bootstrap support for E1C796 as seed ortholog is 100%.

Group of orthologs #10. Best score 3144 bits
Score difference with first non-orthologous sequence - C.intestinalis:3144 G.gallus:1951

F6XWC8              	100.00%		F1NAG7              	100.00%
Bootstrap support for F6XWC8 as seed ortholog is 100%.
Bootstrap support for F1NAG7 as seed ortholog is 100%.

Group of orthologs #11. Best score 2901 bits
Score difference with first non-orthologous sequence - C.intestinalis:2901 G.gallus:2901

F6T0F1              	100.00%		P11029              	100.00%
                    	       		F1P5V8              	77.53%
                    	       		F1NH15              	24.69%
Bootstrap support for F6T0F1 as seed ortholog is 100%.
Bootstrap support for P11029 as seed ortholog is 100%.

Group of orthologs #12. Best score 2866 bits
Score difference with first non-orthologous sequence - C.intestinalis:2866 G.gallus:2866

F6WWV8              	100.00%		P54939              	100.00%
                    	       		F1NGB7              	48.27%
                    	       		E1BWD2              	33.63%
Bootstrap support for F6WWV8 as seed ortholog is 100%.
Bootstrap support for P54939 as seed ortholog is 100%.

Group of orthologs #13. Best score 2808 bits
Score difference with first non-orthologous sequence - C.intestinalis:2808 G.gallus:2808

F7AMF6              	100.00%		F1NW23              	100.00%
                    	       		F1NYC4              	38.73%
Bootstrap support for F7AMF6 as seed ortholog is 100%.
Bootstrap support for F1NW23 as seed ortholog is 100%.

Group of orthologs #14. Best score 2732 bits
Score difference with first non-orthologous sequence - C.intestinalis:1589 G.gallus:2136

F6WEY7              	100.00%		E1C5P6              	100.00%
                    	       		E1C3A6              	64.93%
                    	       		F1NJQ9              	47.34%
Bootstrap support for F6WEY7 as seed ortholog is 100%.
Bootstrap support for E1C5P6 as seed ortholog is 100%.

Group of orthologs #15. Best score 2713 bits
Score difference with first non-orthologous sequence - C.intestinalis:504 G.gallus:517

H2Y265              	100.00%		F1NKL9              	100.00%
H2XWY7              	96.65%		E1C357              	23.52%
                    	       		F1NPB7              	23.42%
                    	       		F1NZF5              	21.92%
                    	       		F1P3W8              	20.79%
                    	       		P02565              	20.79%
                    	       		F1P3X4              	19.66%
                    	       		F1P493              	16.09%
Bootstrap support for H2Y265 as seed ortholog is 100%.
Bootstrap support for F1NKL9 as seed ortholog is 100%.

Group of orthologs #16. Best score 2633 bits
Score difference with first non-orthologous sequence - C.intestinalis:2082 G.gallus:2633

F6X056              	100.00%		E1C6E6              	100.00%
Bootstrap support for F6X056 as seed ortholog is 100%.
Bootstrap support for E1C6E6 as seed ortholog is 100%.

Group of orthologs #17. Best score 2610 bits
Score difference with first non-orthologous sequence - C.intestinalis:2610 G.gallus:1926

F6WNE0              	100.00%		F1N9C7              	100.00%
Bootstrap support for F6WNE0 as seed ortholog is 100%.
Bootstrap support for F1N9C7 as seed ortholog is 100%.

Group of orthologs #18. Best score 2569 bits
Score difference with first non-orthologous sequence - C.intestinalis:2569 G.gallus:2569

F6UG85              	100.00%		E1BZK6              	100.00%
                    	       		E1C683              	38.53%
Bootstrap support for F6UG85 as seed ortholog is 100%.
Bootstrap support for E1BZK6 as seed ortholog is 100%.

Group of orthologs #19. Best score 2505 bits
Score difference with first non-orthologous sequence - C.intestinalis:2505 G.gallus:2505

F6WUQ7              	100.00%		E1C5P2              	100.00%
Bootstrap support for F6WUQ7 as seed ortholog is 100%.
Bootstrap support for E1C5P2 as seed ortholog is 100%.

Group of orthologs #20. Best score 2447 bits
Score difference with first non-orthologous sequence - C.intestinalis:2447 G.gallus:2447

F7BBD1              	100.00%		E1BXD4              	100.00%
Bootstrap support for F7BBD1 as seed ortholog is 100%.
Bootstrap support for E1BXD4 as seed ortholog is 100%.

Group of orthologs #21. Best score 2422 bits
Score difference with first non-orthologous sequence - C.intestinalis:1049 G.gallus:1239

H2XZY7              	100.00%		P10587              	100.00%
                    	       		P14105              	39.67%
                    	       		F1NGG0              	27.07%
Bootstrap support for H2XZY7 as seed ortholog is 100%.
Bootstrap support for P10587 as seed ortholog is 100%.

Group of orthologs #22. Best score 2419 bits
Score difference with first non-orthologous sequence - C.intestinalis:2419 G.gallus:845

F6Q5V5              	100.00%		F1ND51              	100.00%
Bootstrap support for F6Q5V5 as seed ortholog is 100%.
Bootstrap support for F1ND51 as seed ortholog is 100%.

Group of orthologs #23. Best score 2394 bits
Score difference with first non-orthologous sequence - C.intestinalis:2394 G.gallus:2394

F6WN97              	100.00%		F1NG82              	100.00%
Bootstrap support for F6WN97 as seed ortholog is 100%.
Bootstrap support for F1NG82 as seed ortholog is 100%.

Group of orthologs #24. Best score 2256 bits
Score difference with first non-orthologous sequence - C.intestinalis:1628 G.gallus:2256

F7AZ47              	100.00%		F1NZ70              	100.00%
                    	       		F1N9V3              	17.83%
Bootstrap support for F7AZ47 as seed ortholog is 100%.
Bootstrap support for F1NZ70 as seed ortholog is 100%.

Group of orthologs #25. Best score 2252 bits
Score difference with first non-orthologous sequence - C.intestinalis:2252 G.gallus:691

F6VBD0              	100.00%		E1BS70              	100.00%
Bootstrap support for F6VBD0 as seed ortholog is 100%.
Bootstrap support for E1BS70 as seed ortholog is 100%.

Group of orthologs #26. Best score 2229 bits
Score difference with first non-orthologous sequence - C.intestinalis:2229 G.gallus:2229

F6XQM9              	100.00%		F1NAK4              	100.00%
Bootstrap support for F6XQM9 as seed ortholog is 100%.
Bootstrap support for F1NAK4 as seed ortholog is 100%.

Group of orthologs #27. Best score 2200 bits
Score difference with first non-orthologous sequence - C.intestinalis:2200 G.gallus:2200

F6RXY6              	100.00%		F1NZZ2              	100.00%
Bootstrap support for F6RXY6 as seed ortholog is 100%.
Bootstrap support for F1NZZ2 as seed ortholog is 100%.

Group of orthologs #28. Best score 2180 bits
Score difference with first non-orthologous sequence - C.intestinalis:2180 G.gallus:1154

F6R8M3              	100.00%		F1NWW5              	100.00%
                    	       		F1NXZ5              	37.61%
                    	       		F1NWT2              	25.90%
Bootstrap support for F6R8M3 as seed ortholog is 100%.
Bootstrap support for F1NWW5 as seed ortholog is 100%.

Group of orthologs #29. Best score 2115 bits
Score difference with first non-orthologous sequence - C.intestinalis:2115 G.gallus:1335

F6QR00              	100.00%		F1P4F2              	100.00%
Bootstrap support for F6QR00 as seed ortholog is 100%.
Bootstrap support for F1P4F2 as seed ortholog is 100%.

Group of orthologs #30. Best score 2095 bits
Score difference with first non-orthologous sequence - C.intestinalis:2095 G.gallus:2095

F6YKH7              	100.00%		F1P1N6              	100.00%
                    	       		F1P1X4              	46.24%
                    	       		F1N9Y1              	37.75%
Bootstrap support for F6YKH7 as seed ortholog is 100%.
Bootstrap support for F1P1N6 as seed ortholog is 100%.

Group of orthologs #31. Best score 2060 bits
Score difference with first non-orthologous sequence - C.intestinalis:2060 G.gallus:1650

H2XKE2              	100.00%		E1C040              	100.00%
Bootstrap support for H2XKE2 as seed ortholog is 100%.
Bootstrap support for E1C040 as seed ortholog is 100%.

Group of orthologs #32. Best score 2047 bits
Score difference with first non-orthologous sequence - C.intestinalis:1495 G.gallus:1490

F6X5E1              	100.00%		F1NZX9              	100.00%
                    	       		O73700              	98.22%
Bootstrap support for F6X5E1 as seed ortholog is 100%.
Bootstrap support for F1NZX9 as seed ortholog is 100%.

Group of orthologs #33. Best score 2010 bits
Score difference with first non-orthologous sequence - C.intestinalis:1860 G.gallus:1882

H2XRN5              	100.00%		P07751              	100.00%
Bootstrap support for H2XRN5 as seed ortholog is 100%.
Bootstrap support for P07751 as seed ortholog is 100%.

Group of orthologs #34. Best score 1993 bits
Score difference with first non-orthologous sequence - C.intestinalis:1993 G.gallus:1993

F6SXA4              	100.00%		F1P529              	100.00%
Bootstrap support for F6SXA4 as seed ortholog is 100%.
Bootstrap support for F1P529 as seed ortholog is 100%.

Group of orthologs #35. Best score 1923 bits
Score difference with first non-orthologous sequence - C.intestinalis:1923 G.gallus:1923

H2Y0W9              	100.00%		E1C8J1              	100.00%
                    	       		E1C012              	21.95%
Bootstrap support for H2Y0W9 as seed ortholog is 100%.
Bootstrap support for E1C8J1 as seed ortholog is 100%.

Group of orthologs #36. Best score 1892 bits
Score difference with first non-orthologous sequence - C.intestinalis:578 G.gallus:200

F6QCF9              	100.00%		E1C4R5              	100.00%
                    	       		E1BQT2              	78.94%
                    	       		H9KZD1              	52.11%
                    	       		F1NDB8              	30.29%
Bootstrap support for F6QCF9 as seed ortholog is 100%.
Bootstrap support for E1C4R5 as seed ortholog is 97%.

Group of orthologs #37. Best score 1877 bits
Score difference with first non-orthologous sequence - C.intestinalis:1877 G.gallus:1877

F7AHP3              	100.00%		F1P0U1              	100.00%
Bootstrap support for F7AHP3 as seed ortholog is 100%.
Bootstrap support for F1P0U1 as seed ortholog is 100%.

Group of orthologs #38. Best score 1872 bits
Score difference with first non-orthologous sequence - C.intestinalis:1872 G.gallus:1748

F6UE33              	100.00%		E1BVQ3              	100.00%
                    	       		E1C293              	24.54%
Bootstrap support for F6UE33 as seed ortholog is 100%.
Bootstrap support for E1BVQ3 as seed ortholog is 100%.

Group of orthologs #39. Best score 1845 bits
Score difference with first non-orthologous sequence - C.intestinalis:1010 G.gallus:742

F6Z448              	100.00%		F1NR02              	100.00%
                    	       		F1P4K9              	53.36%
Bootstrap support for F6Z448 as seed ortholog is 100%.
Bootstrap support for F1NR02 as seed ortholog is 100%.

Group of orthologs #40. Best score 1786 bits
Score difference with first non-orthologous sequence - C.intestinalis:1260 G.gallus:1246

F6Q8W5              	100.00%		F1NFD4              	100.00%
Bootstrap support for F6Q8W5 as seed ortholog is 100%.
Bootstrap support for F1NFD4 as seed ortholog is 100%.

Group of orthologs #41. Best score 1781 bits
Score difference with first non-orthologous sequence - C.intestinalis:1781 G.gallus:1781

F6SSI2              	100.00%		F1NY18              	100.00%
Bootstrap support for F6SSI2 as seed ortholog is 100%.
Bootstrap support for F1NY18 as seed ortholog is 100%.

Group of orthologs #42. Best score 1776 bits
Score difference with first non-orthologous sequence - C.intestinalis:1776 G.gallus:1345

F6URP5              	100.00%		F1N812              	100.00%
Bootstrap support for F6URP5 as seed ortholog is 100%.
Bootstrap support for F1N812 as seed ortholog is 100%.

Group of orthologs #43. Best score 1767 bits
Score difference with first non-orthologous sequence - C.intestinalis:1767 G.gallus:1767

F6W1H2              	100.00%		H9KZL3              	100.00%
Bootstrap support for F6W1H2 as seed ortholog is 100%.
Bootstrap support for H9KZL3 as seed ortholog is 100%.

Group of orthologs #44. Best score 1757 bits
Score difference with first non-orthologous sequence - C.intestinalis:1757 G.gallus:1757

H2Y1G0              	100.00%		F1NLY0              	100.00%
Bootstrap support for H2Y1G0 as seed ortholog is 100%.
Bootstrap support for F1NLY0 as seed ortholog is 100%.

Group of orthologs #45. Best score 1756 bits
Score difference with first non-orthologous sequence - C.intestinalis:1756 G.gallus:1756

H2XJT1              	100.00%		F1NVE5              	100.00%
Bootstrap support for H2XJT1 as seed ortholog is 100%.
Bootstrap support for F1NVE5 as seed ortholog is 100%.

Group of orthologs #46. Best score 1713 bits
Score difference with first non-orthologous sequence - C.intestinalis:1713 G.gallus:1586

F7BIX8              	100.00%		E1BR01              	100.00%
                    	       		F1N9K4              	29.54%
                    	       		F1P1E8              	20.04%
Bootstrap support for F7BIX8 as seed ortholog is 100%.
Bootstrap support for E1BR01 as seed ortholog is 100%.

Group of orthologs #47. Best score 1703 bits
Score difference with first non-orthologous sequence - C.intestinalis:1703 G.gallus:1703

F6T8P3              	100.00%		F1P179              	100.00%
Bootstrap support for F6T8P3 as seed ortholog is 100%.
Bootstrap support for F1P179 as seed ortholog is 100%.

Group of orthologs #48. Best score 1693 bits
Score difference with first non-orthologous sequence - C.intestinalis:1693 G.gallus:1693

F7AKG2              	100.00%		O42130              	100.00%
                    	       		O42131              	30.68%
Bootstrap support for F7AKG2 as seed ortholog is 100%.
Bootstrap support for O42130 as seed ortholog is 100%.

Group of orthologs #49. Best score 1673 bits
Score difference with first non-orthologous sequence - C.intestinalis:1673 G.gallus:1673

F6ZP18              	100.00%		F1NPB8              	100.00%
Bootstrap support for F6ZP18 as seed ortholog is 100%.
Bootstrap support for F1NPB8 as seed ortholog is 100%.

Group of orthologs #50. Best score 1648 bits
Score difference with first non-orthologous sequence - C.intestinalis:1099 G.gallus:1086

F6SKF5              	100.00%		F1NKQ9              	100.00%
                    	       		F1P435              	18.34%
                    	       		F1NF70              	12.13%
Bootstrap support for F6SKF5 as seed ortholog is 100%.
Bootstrap support for F1NKQ9 as seed ortholog is 100%.

Group of orthologs #51. Best score 1641 bits
Score difference with first non-orthologous sequence - C.intestinalis:1641 G.gallus:1641

F6PXA1              	100.00%		F1NX56              	100.00%
Bootstrap support for F6PXA1 as seed ortholog is 100%.
Bootstrap support for F1NX56 as seed ortholog is 100%.

Group of orthologs #52. Best score 1635 bits
Score difference with first non-orthologous sequence - C.intestinalis:1635 G.gallus:1168

F6YII9              	100.00%		F1NWE4              	100.00%
                    	       		F1NQ48              	45.46%
                    	       		F1N897              	39.03%
Bootstrap support for F6YII9 as seed ortholog is 100%.
Bootstrap support for F1NWE4 as seed ortholog is 100%.

Group of orthologs #53. Best score 1596 bits
Score difference with first non-orthologous sequence - C.intestinalis:1596 G.gallus:1596

F6WLW9              	100.00%		E1C1Y1              	100.00%
Bootstrap support for F6WLW9 as seed ortholog is 100%.
Bootstrap support for E1C1Y1 as seed ortholog is 100%.

Group of orthologs #54. Best score 1589 bits
Score difference with first non-orthologous sequence - C.intestinalis:1589 G.gallus:1589

F6QH36              	100.00%		F1NJL2              	100.00%
Bootstrap support for F6QH36 as seed ortholog is 100%.
Bootstrap support for F1NJL2 as seed ortholog is 100%.

Group of orthologs #55. Best score 1583 bits
Score difference with first non-orthologous sequence - C.intestinalis:1583 G.gallus:1308

H2Y3E5              	100.00%		P12276              	100.00%
Bootstrap support for H2Y3E5 as seed ortholog is 100%.
Bootstrap support for P12276 as seed ortholog is 100%.

Group of orthologs #56. Best score 1580 bits
Score difference with first non-orthologous sequence - C.intestinalis:1580 G.gallus:1580

F7B9A9              	100.00%		E1C709              	100.00%
                    	       		F1NKU1              	31.99%
Bootstrap support for F7B9A9 as seed ortholog is 100%.
Bootstrap support for E1C709 as seed ortholog is 100%.

Group of orthologs #57. Best score 1573 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 G.gallus:325

F6VJG0              	100.00%		F1P2R3              	100.00%
                    	       		F1NDF5              	25.71%
Bootstrap support for F6VJG0 as seed ortholog is 90%.
Bootstrap support for F1P2R3 as seed ortholog is 100%.

Group of orthologs #58. Best score 1570 bits
Score difference with first non-orthologous sequence - C.intestinalis:1570 G.gallus:1204

F6WXT4              	100.00%		Q5F3X4              	100.00%
Bootstrap support for F6WXT4 as seed ortholog is 100%.
Bootstrap support for Q5F3X4 as seed ortholog is 100%.

Group of orthologs #59. Best score 1566 bits
Score difference with first non-orthologous sequence - C.intestinalis:1566 G.gallus:1566

F6YD90              	100.00%		E1C2I9              	100.00%
Bootstrap support for F6YD90 as seed ortholog is 100%.
Bootstrap support for E1C2I9 as seed ortholog is 100%.

Group of orthologs #60. Best score 1557 bits
Score difference with first non-orthologous sequence - C.intestinalis:1557 G.gallus:1557

F6TSV2              	100.00%		F1NGJ3              	100.00%
Bootstrap support for F6TSV2 as seed ortholog is 100%.
Bootstrap support for F1NGJ3 as seed ortholog is 100%.

Group of orthologs #61. Best score 1554 bits
Score difference with first non-orthologous sequence - C.intestinalis:1215 G.gallus:279

H2XY07              	100.00%		P24798              	100.00%
                    	       		P24797              	48.28%
                    	       		P09572              	45.91%
Bootstrap support for H2XY07 as seed ortholog is 100%.
Bootstrap support for P24798 as seed ortholog is 100%.

Group of orthologs #62. Best score 1545 bits
Score difference with first non-orthologous sequence - C.intestinalis:1545 G.gallus:1112

F6Q5L9              	100.00%		F1NXK6              	100.00%
                    	       		E1C889              	49.52%
Bootstrap support for F6Q5L9 as seed ortholog is 100%.
Bootstrap support for F1NXK6 as seed ortholog is 100%.

Group of orthologs #63. Best score 1541 bits
Score difference with first non-orthologous sequence - C.intestinalis:1541 G.gallus:771

F6QI54              	100.00%		Q8AYS8              	100.00%
Bootstrap support for F6QI54 as seed ortholog is 100%.
Bootstrap support for Q8AYS8 as seed ortholog is 100%.

Group of orthologs #64. Best score 1531 bits
Score difference with first non-orthologous sequence - C.intestinalis:1531 G.gallus:1531

F6ZJZ6              	100.00%		F1P0Y0              	100.00%
Bootstrap support for F6ZJZ6 as seed ortholog is 100%.
Bootstrap support for F1P0Y0 as seed ortholog is 100%.

Group of orthologs #65. Best score 1530 bits
Score difference with first non-orthologous sequence - C.intestinalis:1530 G.gallus:1530

F6PRC5              	100.00%		F1NGT4              	100.00%
Bootstrap support for F6PRC5 as seed ortholog is 100%.
Bootstrap support for F1NGT4 as seed ortholog is 100%.

Group of orthologs #66. Best score 1527 bits
Score difference with first non-orthologous sequence - C.intestinalis:1527 G.gallus:1420

F7B7Y1              	100.00%		F1NPP6              	100.00%
                    	       		F1P515              	32.18%
Bootstrap support for F7B7Y1 as seed ortholog is 100%.
Bootstrap support for F1NPP6 as seed ortholog is 100%.

Group of orthologs #67. Best score 1525 bits
Score difference with first non-orthologous sequence - C.intestinalis:1525 G.gallus:389

F6RW91              	100.00%		E1C1A9              	100.00%
                    	       		B6ZLK2              	21.35%
Bootstrap support for F6RW91 as seed ortholog is 100%.
Bootstrap support for E1C1A9 as seed ortholog is 99%.

Group of orthologs #68. Best score 1521 bits
Score difference with first non-orthologous sequence - C.intestinalis:1382 G.gallus:1521

F7AKQ3              	100.00%		E1BQH2              	100.00%
Bootstrap support for F7AKQ3 as seed ortholog is 100%.
Bootstrap support for E1BQH2 as seed ortholog is 100%.

Group of orthologs #69. Best score 1515 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 G.gallus:1138

F6X211              	100.00%		Q03669              	100.00%
H2XSH4              	90.41%		P13585              	34.53%
H2XNA4              	87.21%		Q9YGL9              	18.07%
Bootstrap support for F6X211 as seed ortholog is 100%.
Bootstrap support for Q03669 as seed ortholog is 100%.

Group of orthologs #70. Best score 1510 bits
Score difference with first non-orthologous sequence - C.intestinalis:1510 G.gallus:275

F6PWI5              	100.00%		E1C700              	100.00%
Bootstrap support for F6PWI5 as seed ortholog is 100%.
Bootstrap support for E1C700 as seed ortholog is 99%.

Group of orthologs #71. Best score 1510 bits
Score difference with first non-orthologous sequence - C.intestinalis:1510 G.gallus:1510

F6ZLB7              	100.00%		F1NTD6              	100.00%
Bootstrap support for F6ZLB7 as seed ortholog is 100%.
Bootstrap support for F1NTD6 as seed ortholog is 100%.

Group of orthologs #72. Best score 1509 bits
Score difference with first non-orthologous sequence - C.intestinalis:1509 G.gallus:1509

H2XU88              	100.00%		E1BQY4              	100.00%
                    	       		F1NV65              	33.56%
Bootstrap support for H2XU88 as seed ortholog is 100%.
Bootstrap support for E1BQY4 as seed ortholog is 100%.

Group of orthologs #73. Best score 1505 bits
Score difference with first non-orthologous sequence - C.intestinalis:1505 G.gallus:1416

F6RZ17              	100.00%		F1P3M3              	100.00%
Bootstrap support for F6RZ17 as seed ortholog is 100%.
Bootstrap support for F1P3M3 as seed ortholog is 100%.

Group of orthologs #74. Best score 1504 bits
Score difference with first non-orthologous sequence - C.intestinalis:1504 G.gallus:1504

F6QXZ7              	100.00%		F1NXF1              	100.00%
Bootstrap support for F6QXZ7 as seed ortholog is 100%.
Bootstrap support for F1NXF1 as seed ortholog is 100%.

Group of orthologs #75. Best score 1498 bits
Score difference with first non-orthologous sequence - C.intestinalis:1498 G.gallus:1077

Q4H2Q8              	100.00%		E1C0M8              	100.00%
                    	       		F1P3Q4              	46.97%
Bootstrap support for Q4H2Q8 as seed ortholog is 100%.
Bootstrap support for E1C0M8 as seed ortholog is 100%.

Group of orthologs #76. Best score 1495 bits
Score difference with first non-orthologous sequence - C.intestinalis:1495 G.gallus:1495

F6UM75              	100.00%		F1NX83              	100.00%
Bootstrap support for F6UM75 as seed ortholog is 100%.
Bootstrap support for F1NX83 as seed ortholog is 100%.

Group of orthologs #77. Best score 1487 bits
Score difference with first non-orthologous sequence - C.intestinalis:1487 G.gallus:1487

F6XSF3              	100.00%		Q25BN1              	100.00%
Bootstrap support for F6XSF3 as seed ortholog is 100%.
Bootstrap support for Q25BN1 as seed ortholog is 100%.

Group of orthologs #78. Best score 1480 bits
Score difference with first non-orthologous sequence - C.intestinalis:1480 G.gallus:1480

F6VJH0              	100.00%		E1BVF4              	100.00%
Bootstrap support for F6VJH0 as seed ortholog is 100%.
Bootstrap support for E1BVF4 as seed ortholog is 100%.

Group of orthologs #79. Best score 1475 bits
Score difference with first non-orthologous sequence - C.intestinalis:1475 G.gallus:1475

H2Y1Y9              	100.00%		F1NQZ6              	100.00%
Bootstrap support for H2Y1Y9 as seed ortholog is 100%.
Bootstrap support for F1NQZ6 as seed ortholog is 100%.

Group of orthologs #80. Best score 1466 bits
Score difference with first non-orthologous sequence - C.intestinalis:1466 G.gallus:1466

F6S0L5              	100.00%		E1BW56              	100.00%
                    	       		F1NE09              	74.93%
Bootstrap support for F6S0L5 as seed ortholog is 100%.
Bootstrap support for E1BW56 as seed ortholog is 100%.

Group of orthologs #81. Best score 1460 bits
Score difference with first non-orthologous sequence - C.intestinalis:1460 G.gallus:562

H2XWC3              	100.00%		E1BW21              	100.00%
F6X313              	14.95%		
Bootstrap support for H2XWC3 as seed ortholog is 100%.
Bootstrap support for E1BW21 as seed ortholog is 100%.

Group of orthologs #82. Best score 1459 bits
Score difference with first non-orthologous sequence - C.intestinalis:1133 G.gallus:944

F6YKR9              	100.00%		F1P306              	100.00%
Bootstrap support for F6YKR9 as seed ortholog is 100%.
Bootstrap support for F1P306 as seed ortholog is 100%.

Group of orthologs #83. Best score 1450 bits
Score difference with first non-orthologous sequence - C.intestinalis:1450 G.gallus:1450

H2XLC6              	100.00%		E1BY11              	100.00%
                    	       		F1NA99              	21.24%
Bootstrap support for H2XLC6 as seed ortholog is 100%.
Bootstrap support for E1BY11 as seed ortholog is 100%.

Group of orthologs #84. Best score 1442 bits
Score difference with first non-orthologous sequence - C.intestinalis:1442 G.gallus:1442

F7BJA3              	100.00%		F1N9U0              	100.00%
Bootstrap support for F7BJA3 as seed ortholog is 100%.
Bootstrap support for F1N9U0 as seed ortholog is 100%.

Group of orthologs #85. Best score 1441 bits
Score difference with first non-orthologous sequence - C.intestinalis:1441 G.gallus:1441

F6XL66              	100.00%		F1N988              	100.00%
Bootstrap support for F6XL66 as seed ortholog is 100%.
Bootstrap support for F1N988 as seed ortholog is 100%.

Group of orthologs #86. Best score 1440 bits
Score difference with first non-orthologous sequence - C.intestinalis:1440 G.gallus:389

F6ZAQ4              	100.00%		F1NK49              	100.00%
Bootstrap support for F6ZAQ4 as seed ortholog is 100%.
Bootstrap support for F1NK49 as seed ortholog is 100%.

Group of orthologs #87. Best score 1438 bits
Score difference with first non-orthologous sequence - C.intestinalis:1190 G.gallus:133

F6PGX9              	100.00%		F1NM51              	100.00%
                    	       		Q5F364              	26.10%
Bootstrap support for F6PGX9 as seed ortholog is 100%.
Bootstrap support for F1NM51 as seed ortholog is 98%.

Group of orthologs #88. Best score 1434 bits
Score difference with first non-orthologous sequence - C.intestinalis:1434 G.gallus:1434

F6XUV4              	100.00%		Q92072              	100.00%
Bootstrap support for F6XUV4 as seed ortholog is 100%.
Bootstrap support for Q92072 as seed ortholog is 100%.

Group of orthologs #89. Best score 1430 bits
Score difference with first non-orthologous sequence - C.intestinalis:1268 G.gallus:1430

F7ANR5              	100.00%		Q805F9              	100.00%
Bootstrap support for F7ANR5 as seed ortholog is 100%.
Bootstrap support for Q805F9 as seed ortholog is 100%.

Group of orthologs #90. Best score 1429 bits
Score difference with first non-orthologous sequence - C.intestinalis:811 G.gallus:318

F6W0Y5              	100.00%		P47990              	100.00%
Bootstrap support for F6W0Y5 as seed ortholog is 100%.
Bootstrap support for P47990 as seed ortholog is 99%.

Group of orthologs #91. Best score 1427 bits
Score difference with first non-orthologous sequence - C.intestinalis:1427 G.gallus:1427

H2XVQ2              	100.00%		E1BUQ4              	100.00%
                    	       		E1BVT9              	27.23%
Bootstrap support for H2XVQ2 as seed ortholog is 100%.
Bootstrap support for E1BUQ4 as seed ortholog is 100%.

Group of orthologs #92. Best score 1424 bits
Score difference with first non-orthologous sequence - C.intestinalis:1424 G.gallus:1424

F7BKT8              	100.00%		E1C016              	100.00%
Bootstrap support for F7BKT8 as seed ortholog is 100%.
Bootstrap support for E1C016 as seed ortholog is 100%.

Group of orthologs #93. Best score 1424 bits
Score difference with first non-orthologous sequence - C.intestinalis:1192 G.gallus:1140

H2XKB1              	100.00%		E1C6H1              	100.00%
Bootstrap support for H2XKB1 as seed ortholog is 100%.
Bootstrap support for E1C6H1 as seed ortholog is 100%.

Group of orthologs #94. Best score 1413 bits
Score difference with first non-orthologous sequence - C.intestinalis:1413 G.gallus:1413

F6SQF6              	100.00%		E1C6G9              	100.00%
Bootstrap support for F6SQF6 as seed ortholog is 100%.
Bootstrap support for E1C6G9 as seed ortholog is 100%.

Group of orthologs #95. Best score 1411 bits
Score difference with first non-orthologous sequence - C.intestinalis:1411 G.gallus:1411

F6YN07              	100.00%		E1C6A1              	100.00%
Bootstrap support for F6YN07 as seed ortholog is 100%.
Bootstrap support for E1C6A1 as seed ortholog is 100%.

Group of orthologs #96. Best score 1404 bits
Score difference with first non-orthologous sequence - C.intestinalis:1404 G.gallus:494

F6UKS5              	100.00%		E1BR42              	100.00%
                    	       		F1ND29              	29.74%
                    	       		E1C659              	23.45%
Bootstrap support for F6UKS5 as seed ortholog is 100%.
Bootstrap support for E1BR42 as seed ortholog is 100%.

Group of orthologs #97. Best score 1402 bits
Score difference with first non-orthologous sequence - C.intestinalis:1402 G.gallus:1402

F6PKD1              	100.00%		E1C9K0              	100.00%
Bootstrap support for F6PKD1 as seed ortholog is 100%.
Bootstrap support for E1C9K0 as seed ortholog is 100%.

Group of orthologs #98. Best score 1397 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 G.gallus:127

F6WVU8              	100.00%		E1BX41              	100.00%
Bootstrap support for F6WVU8 as seed ortholog is 99%.
Bootstrap support for E1BX41 as seed ortholog is 98%.

Group of orthologs #99. Best score 1394 bits
Score difference with first non-orthologous sequence - C.intestinalis:1394 G.gallus:1394

F6PJ70              	100.00%		F1NZV6              	100.00%
Bootstrap support for F6PJ70 as seed ortholog is 100%.
Bootstrap support for F1NZV6 as seed ortholog is 100%.

Group of orthologs #100. Best score 1384 bits
Score difference with first non-orthologous sequence - C.intestinalis:1384 G.gallus:831

F6TIZ3              	100.00%		F1NUE8              	100.00%
                    	       		E1BW16              	10.28%
Bootstrap support for F6TIZ3 as seed ortholog is 100%.
Bootstrap support for F1NUE8 as seed ortholog is 100%.

Group of orthologs #101. Best score 1381 bits
Score difference with first non-orthologous sequence - C.intestinalis:1381 G.gallus:560

F6YWQ8              	100.00%		F1P5W0              	100.00%
Bootstrap support for F6YWQ8 as seed ortholog is 100%.
Bootstrap support for F1P5W0 as seed ortholog is 100%.

Group of orthologs #102. Best score 1379 bits
Score difference with first non-orthologous sequence - C.intestinalis:1086 G.gallus:929

H2XZZ5              	100.00%		E1BRJ3              	100.00%
                    	       		F1NUR8              	26.87%
Bootstrap support for H2XZZ5 as seed ortholog is 100%.
Bootstrap support for E1BRJ3 as seed ortholog is 100%.

Group of orthologs #103. Best score 1379 bits
Score difference with first non-orthologous sequence - C.intestinalis:1379 G.gallus:1379

H2XJF1              	100.00%		E1C2C3              	100.00%
Bootstrap support for H2XJF1 as seed ortholog is 100%.
Bootstrap support for E1C2C3 as seed ortholog is 100%.

Group of orthologs #104. Best score 1370 bits
Score difference with first non-orthologous sequence - C.intestinalis:1370 G.gallus:1370

F6Z743              	100.00%		Q5ZIA5              	100.00%
Bootstrap support for F6Z743 as seed ortholog is 100%.
Bootstrap support for Q5ZIA5 as seed ortholog is 100%.

Group of orthologs #105. Best score 1363 bits
Score difference with first non-orthologous sequence - C.intestinalis:1363 G.gallus:1363

F6TIR0              	100.00%		E1BRA0              	100.00%
Bootstrap support for F6TIR0 as seed ortholog is 100%.
Bootstrap support for E1BRA0 as seed ortholog is 100%.

Group of orthologs #106. Best score 1360 bits
Score difference with first non-orthologous sequence - C.intestinalis:1041 G.gallus:75

F6PP79              	100.00%		F1NXF9              	100.00%
Bootstrap support for F6PP79 as seed ortholog is 100%.
Bootstrap support for F1NXF9 as seed ortholog is 59%.
Alternative seed ortholog is F1P0Z5 (75 bits away from this cluster)

Group of orthologs #107. Best score 1357 bits
Score difference with first non-orthologous sequence - C.intestinalis:1357 G.gallus:1357

F6Z3T2              	100.00%		E1C741              	100.00%
                    	       		F1NHL2              	38.23%
Bootstrap support for F6Z3T2 as seed ortholog is 100%.
Bootstrap support for E1C741 as seed ortholog is 100%.

Group of orthologs #108. Best score 1351 bits
Score difference with first non-orthologous sequence - C.intestinalis:1351 G.gallus:1351

H2XQK9              	100.00%		E1C0J3              	100.00%
Bootstrap support for H2XQK9 as seed ortholog is 100%.
Bootstrap support for E1C0J3 as seed ortholog is 100%.

Group of orthologs #109. Best score 1339 bits
Score difference with first non-orthologous sequence - C.intestinalis:884 G.gallus:917

F6UY41              	100.00%		Q9I8D1              	100.00%
Bootstrap support for F6UY41 as seed ortholog is 100%.
Bootstrap support for Q9I8D1 as seed ortholog is 100%.

Group of orthologs #110. Best score 1339 bits
Score difference with first non-orthologous sequence - C.intestinalis:1339 G.gallus:1339

F6YYG7              	100.00%		P15505              	100.00%
Bootstrap support for F6YYG7 as seed ortholog is 100%.
Bootstrap support for P15505 as seed ortholog is 100%.

Group of orthologs #111. Best score 1338 bits
Score difference with first non-orthologous sequence - C.intestinalis:1338 G.gallus:1338

F6VCT2              	100.00%		E1BSI5              	100.00%
Bootstrap support for F6VCT2 as seed ortholog is 100%.
Bootstrap support for E1BSI5 as seed ortholog is 100%.

Group of orthologs #112. Best score 1337 bits
Score difference with first non-orthologous sequence - C.intestinalis:857 G.gallus:870

F6Z6Y7              	100.00%		F1P130              	100.00%
Bootstrap support for F6Z6Y7 as seed ortholog is 100%.
Bootstrap support for F1P130 as seed ortholog is 100%.

Group of orthologs #113. Best score 1336 bits
Score difference with first non-orthologous sequence - C.intestinalis:1336 G.gallus:1336

F6Z3V6              	100.00%		F1ND07              	100.00%
Bootstrap support for F6Z3V6 as seed ortholog is 100%.
Bootstrap support for F1ND07 as seed ortholog is 100%.

Group of orthologs #114. Best score 1330 bits
Score difference with first non-orthologous sequence - C.intestinalis:1330 G.gallus:430

F6VLN4              	100.00%		F1P4V8              	100.00%
Bootstrap support for F6VLN4 as seed ortholog is 100%.
Bootstrap support for F1P4V8 as seed ortholog is 100%.

Group of orthologs #115. Best score 1329 bits
Score difference with first non-orthologous sequence - C.intestinalis:895 G.gallus:770

F7BBP3              	100.00%		F1NN85              	100.00%
Bootstrap support for F7BBP3 as seed ortholog is 100%.
Bootstrap support for F1NN85 as seed ortholog is 100%.

Group of orthologs #116. Best score 1323 bits
Score difference with first non-orthologous sequence - C.intestinalis:1323 G.gallus:1323

F6YKS6              	100.00%		F1NFA4              	100.00%
Bootstrap support for F6YKS6 as seed ortholog is 100%.
Bootstrap support for F1NFA4 as seed ortholog is 100%.

Group of orthologs #117. Best score 1313 bits
Score difference with first non-orthologous sequence - C.intestinalis:1313 G.gallus:951

F6SUU2              	100.00%		E1C6T5              	100.00%
                    	       		E1BSZ8              	31.78%
Bootstrap support for F6SUU2 as seed ortholog is 100%.
Bootstrap support for E1C6T5 as seed ortholog is 100%.

Group of orthologs #118. Best score 1312 bits
Score difference with first non-orthologous sequence - C.intestinalis:1023 G.gallus:1066

H2XSG7              	100.00%		F1NW88              	100.00%
                    	       		F1NPG7              	17.28%
Bootstrap support for H2XSG7 as seed ortholog is 100%.
Bootstrap support for F1NW88 as seed ortholog is 100%.

Group of orthologs #119. Best score 1311 bits
Score difference with first non-orthologous sequence - C.intestinalis:1311 G.gallus:1311

F6THF9              	100.00%		F1N8H3              	100.00%
Bootstrap support for F6THF9 as seed ortholog is 100%.
Bootstrap support for F1N8H3 as seed ortholog is 100%.

Group of orthologs #120. Best score 1311 bits
Score difference with first non-orthologous sequence - C.intestinalis:1311 G.gallus:1235

F6U8H5              	100.00%		F1P2U6              	100.00%
Bootstrap support for F6U8H5 as seed ortholog is 100%.
Bootstrap support for F1P2U6 as seed ortholog is 100%.

Group of orthologs #121. Best score 1305 bits
Score difference with first non-orthologous sequence - C.intestinalis:1305 G.gallus:370

F6USW1              	100.00%		E1BVQ5              	100.00%
Bootstrap support for F6USW1 as seed ortholog is 100%.
Bootstrap support for E1BVQ5 as seed ortholog is 99%.

Group of orthologs #122. Best score 1304 bits
Score difference with first non-orthologous sequence - C.intestinalis:1304 G.gallus:1304

H2XPG3              	100.00%		E1BXR8              	100.00%
                    	       		F1NQL7              	32.19%
Bootstrap support for H2XPG3 as seed ortholog is 100%.
Bootstrap support for E1BXR8 as seed ortholog is 100%.

Group of orthologs #123. Best score 1303 bits
Score difference with first non-orthologous sequence - C.intestinalis:688 G.gallus:535

F6ZHQ8              	100.00%		F1NX55              	100.00%
                    	       		F1P2K5              	18.88%
Bootstrap support for F6ZHQ8 as seed ortholog is 100%.
Bootstrap support for F1NX55 as seed ortholog is 100%.

Group of orthologs #124. Best score 1298 bits
Score difference with first non-orthologous sequence - C.intestinalis:1298 G.gallus:1298

F6VBD5              	100.00%		F1NVD2              	100.00%
Bootstrap support for F6VBD5 as seed ortholog is 100%.
Bootstrap support for F1NVD2 as seed ortholog is 100%.

Group of orthologs #125. Best score 1294 bits
Score difference with first non-orthologous sequence - C.intestinalis:1294 G.gallus:1294

F7AB73              	100.00%		F1NPE2              	100.00%
Bootstrap support for F7AB73 as seed ortholog is 100%.
Bootstrap support for F1NPE2 as seed ortholog is 100%.

Group of orthologs #126. Best score 1293 bits
Score difference with first non-orthologous sequence - C.intestinalis:1293 G.gallus:1293

H2XNB0              	100.00%		E1C7M2              	100.00%
                    	       		F1NE84              	32.70%
Bootstrap support for H2XNB0 as seed ortholog is 100%.
Bootstrap support for E1C7M2 as seed ortholog is 100%.

Group of orthologs #127. Best score 1291 bits
Score difference with first non-orthologous sequence - C.intestinalis:1291 G.gallus:1241

F6SXQ6              	100.00%		E1C690              	100.00%
Bootstrap support for F6SXQ6 as seed ortholog is 100%.
Bootstrap support for E1C690 as seed ortholog is 100%.

Group of orthologs #128. Best score 1287 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 G.gallus:1190

F6YGU8              	100.00%		F1NQT4              	100.00%
Bootstrap support for F6YGU8 as seed ortholog is 100%.
Bootstrap support for F1NQT4 as seed ortholog is 100%.

Group of orthologs #129. Best score 1284 bits
Score difference with first non-orthologous sequence - C.intestinalis:1284 G.gallus:1284

F6PV45              	100.00%		F1P0S8              	100.00%
                    	       		F1NAD9              	28.21%
Bootstrap support for F6PV45 as seed ortholog is 100%.
Bootstrap support for F1P0S8 as seed ortholog is 100%.

Group of orthologs #130. Best score 1282 bits
Score difference with first non-orthologous sequence - C.intestinalis:1282 G.gallus:1282

F7ABF6              	100.00%		F1NQB3              	100.00%
Bootstrap support for F7ABF6 as seed ortholog is 100%.
Bootstrap support for F1NQB3 as seed ortholog is 100%.

Group of orthologs #131. Best score 1278 bits
Score difference with first non-orthologous sequence - C.intestinalis:1018 G.gallus:963

F6W1I6              	100.00%		E1C785              	100.00%
                    	       		F1NFC7              	53.22%
Bootstrap support for F6W1I6 as seed ortholog is 100%.
Bootstrap support for E1C785 as seed ortholog is 100%.

Group of orthologs #132. Best score 1275 bits
Score difference with first non-orthologous sequence - C.intestinalis:1275 G.gallus:501

F6W1V5              	100.00%		E1BZK3              	100.00%
                    	       		E1C7Y0              	30.13%
Bootstrap support for F6W1V5 as seed ortholog is 100%.
Bootstrap support for E1BZK3 as seed ortholog is 100%.

Group of orthologs #133. Best score 1275 bits
Score difference with first non-orthologous sequence - C.intestinalis:1275 G.gallus:781

F6UYA6              	100.00%		F1NY80              	100.00%
Bootstrap support for F6UYA6 as seed ortholog is 100%.
Bootstrap support for F1NY80 as seed ortholog is 100%.

Group of orthologs #134. Best score 1273 bits
Score difference with first non-orthologous sequence - C.intestinalis:1273 G.gallus:371

F6R8H4              	100.00%		F1NMC3              	100.00%
Bootstrap support for F6R8H4 as seed ortholog is 100%.
Bootstrap support for F1NMC3 as seed ortholog is 100%.

Group of orthologs #135. Best score 1268 bits
Score difference with first non-orthologous sequence - C.intestinalis:1268 G.gallus:1268

H2Y0K6              	100.00%		F1N838              	100.00%
Bootstrap support for H2Y0K6 as seed ortholog is 100%.
Bootstrap support for F1N838 as seed ortholog is 100%.

Group of orthologs #136. Best score 1255 bits
Score difference with first non-orthologous sequence - C.intestinalis:1255 G.gallus:1255

F6WUJ1              	100.00%		F1NYB2              	100.00%
Bootstrap support for F6WUJ1 as seed ortholog is 100%.
Bootstrap support for F1NYB2 as seed ortholog is 100%.

Group of orthologs #137. Best score 1254 bits
Score difference with first non-orthologous sequence - C.intestinalis:1050 G.gallus:1254

F6TIJ9              	100.00%		F1NRI8              	100.00%
                    	       		Q9DER7              	44.53%
Bootstrap support for F6TIJ9 as seed ortholog is 100%.
Bootstrap support for F1NRI8 as seed ortholog is 100%.

Group of orthologs #138. Best score 1254 bits
Score difference with first non-orthologous sequence - C.intestinalis:1254 G.gallus:1254

F6WQB5              	100.00%		P81021              	100.00%
Bootstrap support for F6WQB5 as seed ortholog is 100%.
Bootstrap support for P81021 as seed ortholog is 100%.

Group of orthologs #139. Best score 1249 bits
Score difference with first non-orthologous sequence - C.intestinalis:1249 G.gallus:1249

F6YK55              	100.00%		F1NL39              	100.00%
                    	       		F1P3Y9              	41.90%
                    	       		Q5ZLG4              	31.62%
                    	       		Q5ZMW0              	12.45%
Bootstrap support for F6YK55 as seed ortholog is 100%.
Bootstrap support for F1NL39 as seed ortholog is 100%.

Group of orthologs #140. Best score 1244 bits
Score difference with first non-orthologous sequence - C.intestinalis:875 G.gallus:856

F6TZX4              	100.00%		E1BSC0              	100.00%
Bootstrap support for F6TZX4 as seed ortholog is 100%.
Bootstrap support for E1BSC0 as seed ortholog is 100%.

Group of orthologs #141. Best score 1243 bits
Score difference with first non-orthologous sequence - C.intestinalis:1243 G.gallus:1243

F6SFQ0              	100.00%		F1NN75              	100.00%
                    	       		Q5F3R2              	18.62%
Bootstrap support for F6SFQ0 as seed ortholog is 100%.
Bootstrap support for F1NN75 as seed ortholog is 100%.

Group of orthologs #142. Best score 1238 bits
Score difference with first non-orthologous sequence - C.intestinalis:1238 G.gallus:1238

Q1RQ01              	100.00%		F1NV53              	100.00%
Bootstrap support for Q1RQ01 as seed ortholog is 100%.
Bootstrap support for F1NV53 as seed ortholog is 100%.

Group of orthologs #143. Best score 1237 bits
Score difference with first non-orthologous sequence - C.intestinalis:1237 G.gallus:760

F6R6F3              	100.00%		F1NK88              	100.00%
                    	       		F1NMU3              	39.04%
Bootstrap support for F6R6F3 as seed ortholog is 100%.
Bootstrap support for F1NK88 as seed ortholog is 100%.

Group of orthologs #144. Best score 1237 bits
Score difference with first non-orthologous sequence - C.intestinalis:1237 G.gallus:778

F6XKY1              	100.00%		Q90705              	100.00%
Bootstrap support for F6XKY1 as seed ortholog is 100%.
Bootstrap support for Q90705 as seed ortholog is 100%.

Group of orthologs #145. Best score 1233 bits
Score difference with first non-orthologous sequence - C.intestinalis:1233 G.gallus:1233

H2XVV8              	100.00%		E1BQV1              	100.00%
                    	       		F1NPK0              	54.50%
Bootstrap support for H2XVV8 as seed ortholog is 100%.
Bootstrap support for E1BQV1 as seed ortholog is 100%.

Group of orthologs #146. Best score 1233 bits
Score difference with first non-orthologous sequence - C.intestinalis:1233 G.gallus:953

F6Y4K6              	100.00%		H9L041              	100.00%
Bootstrap support for F6Y4K6 as seed ortholog is 100%.
Bootstrap support for H9L041 as seed ortholog is 100%.

Group of orthologs #147. Best score 1232 bits
Score difference with first non-orthologous sequence - C.intestinalis:1232 G.gallus:1232

H2Y0S6              	100.00%		Q5ZIT8              	100.00%
                    	       		F1NKW6              	11.85%
Bootstrap support for H2Y0S6 as seed ortholog is 100%.
Bootstrap support for Q5ZIT8 as seed ortholog is 100%.

Group of orthologs #148. Best score 1230 bits
Score difference with first non-orthologous sequence - C.intestinalis:848 G.gallus:564

F6QYE3              	100.00%		Q5ZLA6              	100.00%
                    	       		E1BXA8              	16.43%
Bootstrap support for F6QYE3 as seed ortholog is 100%.
Bootstrap support for Q5ZLA6 as seed ortholog is 100%.

Group of orthologs #149. Best score 1225 bits
Score difference with first non-orthologous sequence - C.intestinalis:1225 G.gallus:1225

F6UDK5              	100.00%		E1C799              	100.00%
Bootstrap support for F6UDK5 as seed ortholog is 100%.
Bootstrap support for E1C799 as seed ortholog is 100%.

Group of orthologs #150. Best score 1223 bits
Score difference with first non-orthologous sequence - C.intestinalis:1223 G.gallus:142

F6U9F4              	100.00%		Q90875              	100.00%
Bootstrap support for F6U9F4 as seed ortholog is 100%.
Bootstrap support for Q90875 as seed ortholog is 99%.

Group of orthologs #151. Best score 1220 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 G.gallus:1165

F6VWX8              	100.00%		P35440              	100.00%
                    	       		F1P0J8              	27.78%
Bootstrap support for F6VWX8 as seed ortholog is 100%.
Bootstrap support for P35440 as seed ortholog is 100%.

Group of orthologs #152. Best score 1217 bits
Score difference with first non-orthologous sequence - C.intestinalis:781 G.gallus:1217

F6Z5U4              	100.00%		F1N993              	100.00%
Bootstrap support for F6Z5U4 as seed ortholog is 100%.
Bootstrap support for F1N993 as seed ortholog is 100%.

Group of orthologs #153. Best score 1213 bits
Score difference with first non-orthologous sequence - C.intestinalis:1213 G.gallus:861

H2XNV5              	100.00%		P20111              	100.00%
                    	       		P05094              	44.22%
                    	       		Q90734              	36.73%
Bootstrap support for H2XNV5 as seed ortholog is 100%.
Bootstrap support for P20111 as seed ortholog is 100%.

Group of orthologs #154. Best score 1213 bits
Score difference with first non-orthologous sequence - C.intestinalis:1213 G.gallus:1213

F6R7T5              	100.00%		F1NR98              	100.00%
                    	       		E1BSS0              	45.11%
Bootstrap support for F6R7T5 as seed ortholog is 100%.
Bootstrap support for F1NR98 as seed ortholog is 100%.

Group of orthologs #155. Best score 1211 bits
Score difference with first non-orthologous sequence - C.intestinalis:1211 G.gallus:1211

H2XJF3              	100.00%		F1P334              	100.00%
Bootstrap support for H2XJF3 as seed ortholog is 100%.
Bootstrap support for F1P334 as seed ortholog is 100%.

Group of orthologs #156. Best score 1209 bits
Score difference with first non-orthologous sequence - C.intestinalis:1209 G.gallus:1209

H2XKA9              	100.00%		Q5ZI08              	100.00%
Bootstrap support for H2XKA9 as seed ortholog is 100%.
Bootstrap support for Q5ZI08 as seed ortholog is 100%.

Group of orthologs #157. Best score 1205 bits
Score difference with first non-orthologous sequence - C.intestinalis:1205 G.gallus:1205

F6U7R9              	100.00%		F1P5C8              	100.00%
                    	       		F1NJ24              	19.18%
Bootstrap support for F6U7R9 as seed ortholog is 100%.
Bootstrap support for F1P5C8 as seed ortholog is 100%.

Group of orthologs #158. Best score 1205 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:250

H2XS32              	100.00%		E1BVN3              	100.00%
Bootstrap support for H2XS32 as seed ortholog is 99%.
Bootstrap support for E1BVN3 as seed ortholog is 99%.

Group of orthologs #159. Best score 1205 bits
Score difference with first non-orthologous sequence - C.intestinalis:1205 G.gallus:291

H2XN51              	100.00%		F1N9G0              	100.00%
Bootstrap support for H2XN51 as seed ortholog is 100%.
Bootstrap support for F1N9G0 as seed ortholog is 99%.

Group of orthologs #160. Best score 1200 bits
Score difference with first non-orthologous sequence - C.intestinalis:1200 G.gallus:823

F6V993              	100.00%		F1P140              	100.00%
                    	       		E1BYP1              	33.05%
Bootstrap support for F6V993 as seed ortholog is 100%.
Bootstrap support for F1P140 as seed ortholog is 100%.

Group of orthologs #161. Best score 1199 bits
Score difference with first non-orthologous sequence - C.intestinalis:1199 G.gallus:1199

F6VGC6              	100.00%		E1BV44              	100.00%
Bootstrap support for F6VGC6 as seed ortholog is 100%.
Bootstrap support for E1BV44 as seed ortholog is 100%.

Group of orthologs #162. Best score 1199 bits
Score difference with first non-orthologous sequence - C.intestinalis:1199 G.gallus:1199

F6YGJ7              	100.00%		Q6U7I1              	100.00%
Bootstrap support for F6YGJ7 as seed ortholog is 100%.
Bootstrap support for Q6U7I1 as seed ortholog is 100%.

Group of orthologs #163. Best score 1197 bits
Score difference with first non-orthologous sequence - C.intestinalis:1197 G.gallus:1197

F7AWF9              	100.00%		F1NHG5              	100.00%
                    	       		F1NF14              	40.87%
Bootstrap support for F7AWF9 as seed ortholog is 100%.
Bootstrap support for F1NHG5 as seed ortholog is 100%.

Group of orthologs #164. Best score 1197 bits
Score difference with first non-orthologous sequence - C.intestinalis:1197 G.gallus:265

F6SPZ6              	100.00%		E1BX21              	100.00%
Bootstrap support for F6SPZ6 as seed ortholog is 100%.
Bootstrap support for E1BX21 as seed ortholog is 99%.

Group of orthologs #165. Best score 1195 bits
Score difference with first non-orthologous sequence - C.intestinalis:1195 G.gallus:1195

F6VSQ8              	100.00%		F1NB33              	100.00%
                    	       		E1C9J5              	40.15%
Bootstrap support for F6VSQ8 as seed ortholog is 100%.
Bootstrap support for F1NB33 as seed ortholog is 100%.

Group of orthologs #166. Best score 1193 bits
Score difference with first non-orthologous sequence - C.intestinalis:969 G.gallus:453

F6V2Z5              	100.00%		E1C368              	100.00%
Bootstrap support for F6V2Z5 as seed ortholog is 100%.
Bootstrap support for E1C368 as seed ortholog is 100%.

Group of orthologs #167. Best score 1193 bits
Score difference with first non-orthologous sequence - C.intestinalis:972 G.gallus:451

F6T8N6              	100.00%		F1P043              	100.00%
Bootstrap support for F6T8N6 as seed ortholog is 100%.
Bootstrap support for F1P043 as seed ortholog is 100%.

Group of orthologs #168. Best score 1184 bits
Score difference with first non-orthologous sequence - C.intestinalis:640 G.gallus:788

H2XVU8              	100.00%		Q90819              	100.00%
                    	       		F1NSD2              	27.93%
Bootstrap support for H2XVU8 as seed ortholog is 100%.
Bootstrap support for Q90819 as seed ortholog is 100%.

Group of orthologs #169. Best score 1181 bits
Score difference with first non-orthologous sequence - C.intestinalis:663 G.gallus:494

F6SH00              	100.00%		F1NER7              	100.00%
                    	       		E1C8A3              	8.39%
                    	       		E1BX05              	7.10%
Bootstrap support for F6SH00 as seed ortholog is 100%.
Bootstrap support for F1NER7 as seed ortholog is 100%.

Group of orthologs #170. Best score 1175 bits
Score difference with first non-orthologous sequence - C.intestinalis:1175 G.gallus:341

F6VF77              	100.00%		E1BXY4              	100.00%
Bootstrap support for F6VF77 as seed ortholog is 100%.
Bootstrap support for E1BXY4 as seed ortholog is 100%.

Group of orthologs #171. Best score 1174 bits
Score difference with first non-orthologous sequence - C.intestinalis:1174 G.gallus:1174

F6SI15              	100.00%		E1BWV7              	100.00%
Bootstrap support for F6SI15 as seed ortholog is 100%.
Bootstrap support for E1BWV7 as seed ortholog is 100%.

Group of orthologs #172. Best score 1171 bits
Score difference with first non-orthologous sequence - C.intestinalis:1171 G.gallus:1171

F6ZN98              	100.00%		E1BVC5              	100.00%
Bootstrap support for F6ZN98 as seed ortholog is 100%.
Bootstrap support for E1BVC5 as seed ortholog is 100%.

Group of orthologs #173. Best score 1169 bits
Score difference with first non-orthologous sequence - C.intestinalis:1169 G.gallus:686

H2Y089              	100.00%		F1NCK1              	100.00%
                    	       		F1NJZ7              	39.33%
Bootstrap support for H2Y089 as seed ortholog is 100%.
Bootstrap support for F1NCK1 as seed ortholog is 100%.

Group of orthologs #174. Best score 1165 bits
Score difference with first non-orthologous sequence - C.intestinalis:1165 G.gallus:976

F6RUN6              	100.00%		F1P3F8              	100.00%
                    	       		E1BV67              	30.27%
                    	       		Q5F454              	7.30%
Bootstrap support for F6RUN6 as seed ortholog is 100%.
Bootstrap support for F1P3F8 as seed ortholog is 100%.

Group of orthologs #175. Best score 1162 bits
Score difference with first non-orthologous sequence - C.intestinalis:1162 G.gallus:1162

F6ZRN0              	100.00%		F1P257              	100.00%
Bootstrap support for F6ZRN0 as seed ortholog is 100%.
Bootstrap support for F1P257 as seed ortholog is 100%.

Group of orthologs #176. Best score 1159 bits
Score difference with first non-orthologous sequence - C.intestinalis:1159 G.gallus:1159

F6SWL4              	100.00%		F1NHJ5              	100.00%
Bootstrap support for F6SWL4 as seed ortholog is 100%.
Bootstrap support for F1NHJ5 as seed ortholog is 100%.

Group of orthologs #177. Best score 1157 bits
Score difference with first non-orthologous sequence - C.intestinalis:1157 G.gallus:1157

F7BPQ7              	100.00%		Q5ZLA7              	100.00%
Bootstrap support for F7BPQ7 as seed ortholog is 100%.
Bootstrap support for Q5ZLA7 as seed ortholog is 100%.

Group of orthologs #178. Best score 1156 bits
Score difference with first non-orthologous sequence - C.intestinalis:1156 G.gallus:573

F6SUT6              	100.00%		E1C0H0              	100.00%
                    	       		F1NPG0              	37.97%
Bootstrap support for F6SUT6 as seed ortholog is 100%.
Bootstrap support for E1C0H0 as seed ortholog is 100%.

Group of orthologs #179. Best score 1152 bits
Score difference with first non-orthologous sequence - C.intestinalis:1152 G.gallus:1152

H2XKD5              	100.00%		Q5ZK03              	100.00%
Bootstrap support for H2XKD5 as seed ortholog is 100%.
Bootstrap support for Q5ZK03 as seed ortholog is 100%.

Group of orthologs #180. Best score 1150 bits
Score difference with first non-orthologous sequence - C.intestinalis:1150 G.gallus:992

F6R4B5              	100.00%		E1BW97              	100.00%
                    	       		F1NY63              	12.99%
Bootstrap support for F6R4B5 as seed ortholog is 100%.
Bootstrap support for E1BW97 as seed ortholog is 100%.

Group of orthologs #181. Best score 1148 bits
Score difference with first non-orthologous sequence - C.intestinalis:1101 G.gallus:1148

F6UHM2              	100.00%		F1NSW3              	100.00%
Bootstrap support for F6UHM2 as seed ortholog is 100%.
Bootstrap support for F1NSW3 as seed ortholog is 100%.

Group of orthologs #182. Best score 1146 bits
Score difference with first non-orthologous sequence - C.intestinalis:961 G.gallus:1146

F6XC92              	100.00%		F1P064              	100.00%
Bootstrap support for F6XC92 as seed ortholog is 100%.
Bootstrap support for F1P064 as seed ortholog is 100%.

Group of orthologs #183. Best score 1137 bits
Score difference with first non-orthologous sequence - C.intestinalis:931 G.gallus:965

F6ZZL8              	100.00%		E1C243              	100.00%
                    	       		E1BZT6              	35.91%
                    	       		E1C5N0              	28.10%
Bootstrap support for F6ZZL8 as seed ortholog is 100%.
Bootstrap support for E1C243 as seed ortholog is 100%.

Group of orthologs #184. Best score 1137 bits
Score difference with first non-orthologous sequence - C.intestinalis:1137 G.gallus:152

F7BNC1              	100.00%		Q5F371              	100.00%
Bootstrap support for F7BNC1 as seed ortholog is 100%.
Bootstrap support for Q5F371 as seed ortholog is 100%.

Group of orthologs #185. Best score 1131 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 G.gallus:1131

F6WKG4              	100.00%		E1C7N8              	100.00%
F6XBM6              	16.86%		
F7B363              	5.26%		
Bootstrap support for F6WKG4 as seed ortholog is 100%.
Bootstrap support for E1C7N8 as seed ortholog is 100%.

Group of orthologs #186. Best score 1128 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 G.gallus:786

H2XRP2              	100.00%		E1BXM8              	100.00%
                    	       		F1NSW4              	8.42%
Bootstrap support for H2XRP2 as seed ortholog is 100%.
Bootstrap support for E1BXM8 as seed ortholog is 100%.

Group of orthologs #187. Best score 1128 bits
Score difference with first non-orthologous sequence - C.intestinalis:1128 G.gallus:1128

F6YYE4              	100.00%		Q90988              	100.00%
                    	       		E1C611              	71.61%
Bootstrap support for F6YYE4 as seed ortholog is 100%.
Bootstrap support for Q90988 as seed ortholog is 100%.

Group of orthologs #188. Best score 1123 bits
Score difference with first non-orthologous sequence - C.intestinalis:1123 G.gallus:864

H2XLC2              	100.00%		F1NCI1              	100.00%
                    	       		E1BY12              	58.65%
Bootstrap support for H2XLC2 as seed ortholog is 100%.
Bootstrap support for F1NCI1 as seed ortholog is 100%.

Group of orthologs #189. Best score 1123 bits
Score difference with first non-orthologous sequence - C.intestinalis:1123 G.gallus:1123

F6Q0D8              	100.00%		F1NPR6              	100.00%
Bootstrap support for F6Q0D8 as seed ortholog is 100%.
Bootstrap support for F1NPR6 as seed ortholog is 100%.

Group of orthologs #190. Best score 1118 bits
Score difference with first non-orthologous sequence - C.intestinalis:1118 G.gallus:1118

F6TF50              	100.00%		F1NKC1              	100.00%
Bootstrap support for F6TF50 as seed ortholog is 100%.
Bootstrap support for F1NKC1 as seed ortholog is 100%.

Group of orthologs #191. Best score 1116 bits
Score difference with first non-orthologous sequence - C.intestinalis:1116 G.gallus:753

F6ST44              	100.00%		E1BQG8              	100.00%
Bootstrap support for F6ST44 as seed ortholog is 100%.
Bootstrap support for E1BQG8 as seed ortholog is 100%.

Group of orthologs #192. Best score 1115 bits
Score difference with first non-orthologous sequence - C.intestinalis:1115 G.gallus:455

F6W6J2              	100.00%		F1NTJ5              	100.00%
                    	       		P47807              	11.44%
Bootstrap support for F6W6J2 as seed ortholog is 100%.
Bootstrap support for F1NTJ5 as seed ortholog is 100%.

Group of orthologs #193. Best score 1114 bits
Score difference with first non-orthologous sequence - C.intestinalis:800 G.gallus:830

F6RKM9              	100.00%		F1NAG0              	100.00%
Bootstrap support for F6RKM9 as seed ortholog is 100%.
Bootstrap support for F1NAG0 as seed ortholog is 100%.

Group of orthologs #194. Best score 1112 bits
Score difference with first non-orthologous sequence - C.intestinalis:1112 G.gallus:1112

F6TML4              	100.00%		Q5ZKK7              	100.00%
Bootstrap support for F6TML4 as seed ortholog is 100%.
Bootstrap support for Q5ZKK7 as seed ortholog is 100%.

Group of orthologs #195. Best score 1111 bits
Score difference with first non-orthologous sequence - C.intestinalis:812 G.gallus:272

F6WRK8              	100.00%		Q02440              	100.00%
Bootstrap support for F6WRK8 as seed ortholog is 100%.
Bootstrap support for Q02440 as seed ortholog is 100%.

Group of orthologs #196. Best score 1111 bits
Score difference with first non-orthologous sequence - C.intestinalis:1111 G.gallus:279

H2Y1Z9              	100.00%		F1P5J5              	100.00%
Bootstrap support for H2Y1Z9 as seed ortholog is 100%.
Bootstrap support for F1P5J5 as seed ortholog is 100%.

Group of orthologs #197. Best score 1106 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 G.gallus:61

F6W8I3              	100.00%		O73885              	100.00%
Bootstrap support for F6W8I3 as seed ortholog is 100%.
Bootstrap support for O73885 as seed ortholog is 90%.

Group of orthologs #198. Best score 1105 bits
Score difference with first non-orthologous sequence - C.intestinalis:1105 G.gallus:164

F6TCT1              	100.00%		E1BVW9              	100.00%
                    	       		E1C7X2              	46.31%
Bootstrap support for F6TCT1 as seed ortholog is 100%.
Bootstrap support for E1BVW9 as seed ortholog is 99%.

Group of orthologs #199. Best score 1102 bits
Score difference with first non-orthologous sequence - C.intestinalis:1102 G.gallus:1102

F6XQ09              	100.00%		E1BY48              	100.00%
Bootstrap support for F6XQ09 as seed ortholog is 100%.
Bootstrap support for E1BY48 as seed ortholog is 100%.

Group of orthologs #200. Best score 1102 bits
Score difference with first non-orthologous sequence - C.intestinalis:1102 G.gallus:1102

H2XTU1              	100.00%		E1C6Y2              	100.00%
Bootstrap support for H2XTU1 as seed ortholog is 100%.
Bootstrap support for E1C6Y2 as seed ortholog is 100%.

Group of orthologs #201. Best score 1101 bits
Score difference with first non-orthologous sequence - C.intestinalis:1101 G.gallus:698

F6S7I2              	100.00%		E1BVL9              	100.00%
Bootstrap support for F6S7I2 as seed ortholog is 100%.
Bootstrap support for E1BVL9 as seed ortholog is 100%.

Group of orthologs #202. Best score 1097 bits
Score difference with first non-orthologous sequence - C.intestinalis:1097 G.gallus:1097

F6Y8C3              	100.00%		E1C2J8              	100.00%
Bootstrap support for F6Y8C3 as seed ortholog is 100%.
Bootstrap support for E1C2J8 as seed ortholog is 100%.

Group of orthologs #203. Best score 1095 bits
Score difference with first non-orthologous sequence - C.intestinalis:1095 G.gallus:1095

F6TQ69              	100.00%		F1NBA8              	100.00%
                    	       		F1NPP2              	30.07%
Bootstrap support for F6TQ69 as seed ortholog is 100%.
Bootstrap support for F1NBA8 as seed ortholog is 100%.

Group of orthologs #204. Best score 1095 bits
Score difference with first non-orthologous sequence - C.intestinalis:1095 G.gallus:401

F6Q5T5              	100.00%		F1ND06              	100.00%
Bootstrap support for F6Q5T5 as seed ortholog is 100%.
Bootstrap support for F1ND06 as seed ortholog is 100%.

Group of orthologs #205. Best score 1095 bits
Score difference with first non-orthologous sequence - C.intestinalis:1095 G.gallus:627

F6S181              	100.00%		F1NLV9              	100.00%
Bootstrap support for F6S181 as seed ortholog is 100%.
Bootstrap support for F1NLV9 as seed ortholog is 100%.

Group of orthologs #206. Best score 1094 bits
Score difference with first non-orthologous sequence - C.intestinalis:960 G.gallus:205

F6Q5K0              	100.00%		P30997              	100.00%
                    	       		E1C7M7              	51.39%
Bootstrap support for F6Q5K0 as seed ortholog is 100%.
Bootstrap support for P30997 as seed ortholog is 99%.

Group of orthologs #207. Best score 1093 bits
Score difference with first non-orthologous sequence - C.intestinalis:1093 G.gallus:1093

F6US09              	100.00%		E1BTZ6              	100.00%
                    	       		E1BQZ7              	38.21%
Bootstrap support for F6US09 as seed ortholog is 100%.
Bootstrap support for E1BTZ6 as seed ortholog is 100%.

Group of orthologs #208. Best score 1090 bits
Score difference with first non-orthologous sequence - C.intestinalis:927 G.gallus:818

F6UK45              	100.00%		F1N945              	100.00%
                    	       		E1C3A1              	38.77%
Bootstrap support for F6UK45 as seed ortholog is 100%.
Bootstrap support for F1N945 as seed ortholog is 100%.

Group of orthologs #209. Best score 1086 bits
Score difference with first non-orthologous sequence - C.intestinalis:1086 G.gallus:1086

H2XV68              	100.00%		E1C0V2              	100.00%
Bootstrap support for H2XV68 as seed ortholog is 100%.
Bootstrap support for E1C0V2 as seed ortholog is 100%.

Group of orthologs #210. Best score 1084 bits
Score difference with first non-orthologous sequence - C.intestinalis:1084 G.gallus:1084

F6RMU1              	100.00%		F1NP63              	100.00%
Bootstrap support for F6RMU1 as seed ortholog is 100%.
Bootstrap support for F1NP63 as seed ortholog is 100%.

Group of orthologs #211. Best score 1076 bits
Score difference with first non-orthologous sequence - C.intestinalis:1076 G.gallus:1076

F6Z4U5              	100.00%		E1C8X4              	100.00%
Bootstrap support for F6Z4U5 as seed ortholog is 100%.
Bootstrap support for E1C8X4 as seed ortholog is 100%.

Group of orthologs #212. Best score 1073 bits
Score difference with first non-orthologous sequence - C.intestinalis:1073 G.gallus:1073

H2XNV6              	100.00%		F1P4X9              	100.00%
Bootstrap support for H2XNV6 as seed ortholog is 100%.
Bootstrap support for F1P4X9 as seed ortholog is 100%.

Group of orthologs #213. Best score 1072 bits
Score difference with first non-orthologous sequence - C.intestinalis:1072 G.gallus:772

F6PW28              	100.00%		E1C0W8              	100.00%
Bootstrap support for F6PW28 as seed ortholog is 100%.
Bootstrap support for E1C0W8 as seed ortholog is 100%.

Group of orthologs #214. Best score 1072 bits
Score difference with first non-orthologous sequence - C.intestinalis:770 G.gallus:755

F7BA18              	100.00%		Q5ZKL0              	100.00%
Bootstrap support for F7BA18 as seed ortholog is 100%.
Bootstrap support for Q5ZKL0 as seed ortholog is 100%.

Group of orthologs #215. Best score 1067 bits
Score difference with first non-orthologous sequence - C.intestinalis:759 G.gallus:778

F6Z4G6              	100.00%		Q5ZMN2              	100.00%
Bootstrap support for F6Z4G6 as seed ortholog is 100%.
Bootstrap support for Q5ZMN2 as seed ortholog is 100%.

Group of orthologs #216. Best score 1065 bits
Score difference with first non-orthologous sequence - C.intestinalis:1065 G.gallus:572

H2XL55              	100.00%		E1BXX6              	100.00%
Bootstrap support for H2XL55 as seed ortholog is 100%.
Bootstrap support for E1BXX6 as seed ortholog is 100%.

Group of orthologs #217. Best score 1063 bits
Score difference with first non-orthologous sequence - C.intestinalis:1063 G.gallus:1063

F6XHQ2              	100.00%		E1BUD8              	100.00%
                    	       		E1BSP8              	6.58%
Bootstrap support for F6XHQ2 as seed ortholog is 100%.
Bootstrap support for E1BUD8 as seed ortholog is 100%.

Group of orthologs #218. Best score 1063 bits
Score difference with first non-orthologous sequence - C.intestinalis:699 G.gallus:431

F6S6B2              	100.00%		F1NN68              	100.00%
                    	       		E1C6E1              	9.51%
Bootstrap support for F6S6B2 as seed ortholog is 100%.
Bootstrap support for F1NN68 as seed ortholog is 100%.

Group of orthologs #219. Best score 1063 bits
Score difference with first non-orthologous sequence - C.intestinalis:1063 G.gallus:140

H2XTN7              	100.00%		F1NR57              	100.00%
                    	       		E1BTK6              	20.93%
Bootstrap support for H2XTN7 as seed ortholog is 100%.
Bootstrap support for F1NR57 as seed ortholog is 98%.

Group of orthologs #220. Best score 1060 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 G.gallus:936

F6V1Q0              	100.00%		F1NYZ4              	100.00%
                    	       		F1P023              	28.71%
Bootstrap support for F6V1Q0 as seed ortholog is 100%.
Bootstrap support for F1NYZ4 as seed ortholog is 100%.

Group of orthologs #221. Best score 1055 bits
Score difference with first non-orthologous sequence - C.intestinalis:1055 G.gallus:1055

F7BEI8              	100.00%		F1P5M2              	100.00%
Bootstrap support for F7BEI8 as seed ortholog is 100%.
Bootstrap support for F1P5M2 as seed ortholog is 100%.

Group of orthologs #222. Best score 1053 bits
Score difference with first non-orthologous sequence - C.intestinalis:1053 G.gallus:278

F6R356              	100.00%		Q9I8D0              	100.00%
Bootstrap support for F6R356 as seed ortholog is 100%.
Bootstrap support for Q9I8D0 as seed ortholog is 100%.

Group of orthologs #223. Best score 1051 bits
Score difference with first non-orthologous sequence - C.intestinalis:1051 G.gallus:1051

F6U3T3              	100.00%		F1NLJ3              	100.00%
                    	       		E1C7L2              	45.63%
                    	       		F1P1H2              	40.28%
                    	       		P18652              	37.46%
Bootstrap support for F6U3T3 as seed ortholog is 100%.
Bootstrap support for F1NLJ3 as seed ortholog is 100%.

Group of orthologs #224. Best score 1043 bits
Score difference with first non-orthologous sequence - C.intestinalis:1043 G.gallus:1043

F6W446              	100.00%		F1NJU6              	100.00%
                    	       		F1NFN4              	22.47%
Bootstrap support for F6W446 as seed ortholog is 100%.
Bootstrap support for F1NJU6 as seed ortholog is 100%.

Group of orthologs #225. Best score 1042 bits
Score difference with first non-orthologous sequence - C.intestinalis:718 G.gallus:1042

H2XSM0              	100.00%		Q5ZIP4              	100.00%
Bootstrap support for H2XSM0 as seed ortholog is 100%.
Bootstrap support for Q5ZIP4 as seed ortholog is 100%.

Group of orthologs #226. Best score 1037 bits
Score difference with first non-orthologous sequence - C.intestinalis:1037 G.gallus:1037

F7B9N2              	100.00%		Q5ZMI4              	100.00%
                    	       		F1NKR8              	80.91%
Bootstrap support for F7B9N2 as seed ortholog is 100%.
Bootstrap support for Q5ZMI4 as seed ortholog is 100%.

Group of orthologs #227. Best score 1037 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 G.gallus:244

F6SXM4              	100.00%		Q90593              	100.00%
Bootstrap support for F6SXM4 as seed ortholog is 99%.
Bootstrap support for Q90593 as seed ortholog is 100%.

Group of orthologs #228. Best score 1031 bits
Score difference with first non-orthologous sequence - C.intestinalis:1031 G.gallus:1031

F7BBW9              	100.00%		F1NXN8              	100.00%
Bootstrap support for F7BBW9 as seed ortholog is 100%.
Bootstrap support for F1NXN8 as seed ortholog is 100%.

Group of orthologs #229. Best score 1029 bits
Score difference with first non-orthologous sequence - C.intestinalis:934 G.gallus:618

H2XJT5              	100.00%		F1NBW2              	100.00%
                    	       		Q90647              	96.02%
Bootstrap support for H2XJT5 as seed ortholog is 100%.
Bootstrap support for F1NBW2 as seed ortholog is 100%.

Group of orthologs #230. Best score 1028 bits
Score difference with first non-orthologous sequence - C.intestinalis:1028 G.gallus:1028

F6PRZ9              	100.00%		F1NZZ7              	100.00%
Bootstrap support for F6PRZ9 as seed ortholog is 100%.
Bootstrap support for F1NZZ7 as seed ortholog is 100%.

Group of orthologs #231. Best score 1020 bits
Score difference with first non-orthologous sequence - C.intestinalis:1020 G.gallus:1020

F7ADN1              	100.00%		F1P3C6              	100.00%
Bootstrap support for F7ADN1 as seed ortholog is 100%.
Bootstrap support for F1P3C6 as seed ortholog is 100%.

Group of orthologs #232. Best score 1019 bits
Score difference with first non-orthologous sequence - C.intestinalis:902 G.gallus:869

F6ZH24              	100.00%		P31696              	100.00%
Bootstrap support for F6ZH24 as seed ortholog is 100%.
Bootstrap support for P31696 as seed ortholog is 100%.

Group of orthologs #233. Best score 1015 bits
Score difference with first non-orthologous sequence - C.intestinalis:1015 G.gallus:659

F6PQW3              	100.00%		E1BS28              	100.00%
                    	       		F1NH09              	35.25%
Bootstrap support for F6PQW3 as seed ortholog is 100%.
Bootstrap support for E1BS28 as seed ortholog is 99%.

Group of orthologs #234. Best score 1015 bits
Score difference with first non-orthologous sequence - C.intestinalis:1015 G.gallus:1015

F6R8V3              	100.00%		E1BSS3              	100.00%
Bootstrap support for F6R8V3 as seed ortholog is 100%.
Bootstrap support for E1BSS3 as seed ortholog is 100%.

Group of orthologs #235. Best score 1015 bits
Score difference with first non-orthologous sequence - C.intestinalis:696 G.gallus:672

F6YBA5              	100.00%		E1C9C2              	100.00%
Bootstrap support for F6YBA5 as seed ortholog is 100%.
Bootstrap support for E1C9C2 as seed ortholog is 100%.

Group of orthologs #236. Best score 1015 bits
Score difference with first non-orthologous sequence - C.intestinalis:1015 G.gallus:570

F6Z5E6              	100.00%		F1NNI2              	100.00%
Bootstrap support for F6Z5E6 as seed ortholog is 100%.
Bootstrap support for F1NNI2 as seed ortholog is 100%.

Group of orthologs #237. Best score 1014 bits
Score difference with first non-orthologous sequence - C.intestinalis:1014 G.gallus:701

F7AXL0              	100.00%		F1NCE4              	100.00%
Bootstrap support for F7AXL0 as seed ortholog is 100%.
Bootstrap support for F1NCE4 as seed ortholog is 100%.

Group of orthologs #238. Best score 1012 bits
Score difference with first non-orthologous sequence - C.intestinalis:1012 G.gallus:1012

F7AEZ3              	100.00%		F1NUS2              	100.00%
Bootstrap support for F7AEZ3 as seed ortholog is 100%.
Bootstrap support for F1NUS2 as seed ortholog is 100%.

Group of orthologs #239. Best score 1012 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 G.gallus:456

H2XU53              	100.00%		Q5ZM98              	100.00%
Bootstrap support for H2XU53 as seed ortholog is 100%.
Bootstrap support for Q5ZM98 as seed ortholog is 100%.

Group of orthologs #240. Best score 1011 bits
Score difference with first non-orthologous sequence - C.intestinalis:1011 G.gallus:1011

F6ZZJ8              	100.00%		F1NVF0              	100.00%
Bootstrap support for F6ZZJ8 as seed ortholog is 100%.
Bootstrap support for F1NVF0 as seed ortholog is 100%.

Group of orthologs #241. Best score 1008 bits
Score difference with first non-orthologous sequence - C.intestinalis:1008 G.gallus:1008

F6PKA1              	100.00%		E1BSU2              	100.00%
                    	       		F1NYY6              	49.17%
                    	       		F1NEZ8              	7.54%
Bootstrap support for F6PKA1 as seed ortholog is 100%.
Bootstrap support for E1BSU2 as seed ortholog is 100%.

Group of orthologs #242. Best score 1007 bits
Score difference with first non-orthologous sequence - C.intestinalis:1007 G.gallus:1007

F7APX0              	100.00%		E1BR81              	100.00%
Bootstrap support for F7APX0 as seed ortholog is 100%.
Bootstrap support for E1BR81 as seed ortholog is 100%.

Group of orthologs #243. Best score 1005 bits
Score difference with first non-orthologous sequence - C.intestinalis:1005 G.gallus:1005

F7B997              	100.00%		Q5F499              	100.00%
Bootstrap support for F7B997 as seed ortholog is 100%.
Bootstrap support for Q5F499 as seed ortholog is 100%.

Group of orthologs #244. Best score 1004 bits
Score difference with first non-orthologous sequence - C.intestinalis:1004 G.gallus:1004

F6XU15              	100.00%		F1NTB8              	100.00%
Bootstrap support for F6XU15 as seed ortholog is 100%.
Bootstrap support for F1NTB8 as seed ortholog is 100%.

Group of orthologs #245. Best score 1003 bits
Score difference with first non-orthologous sequence - C.intestinalis:1003 G.gallus:1003

H2XNX0              	100.00%		Q5ZME3              	100.00%
Bootstrap support for H2XNX0 as seed ortholog is 100%.
Bootstrap support for Q5ZME3 as seed ortholog is 100%.

Group of orthologs #246. Best score 1002 bits
Score difference with first non-orthologous sequence - C.intestinalis:1002 G.gallus:804

F6R472              	100.00%		E1BYQ3              	100.00%
Bootstrap support for F6R472 as seed ortholog is 100%.
Bootstrap support for E1BYQ3 as seed ortholog is 100%.

Group of orthologs #247. Best score 1000 bits
Score difference with first non-orthologous sequence - C.intestinalis:913 G.gallus:909

F6XZ43              	100.00%		F1P0C9              	100.00%
Bootstrap support for F6XZ43 as seed ortholog is 100%.
Bootstrap support for F1P0C9 as seed ortholog is 100%.

Group of orthologs #248. Best score 997 bits
Score difference with first non-orthologous sequence - C.intestinalis:997 G.gallus:496

F6PPP8              	100.00%		E1BR64              	100.00%
                    	       		F1NBQ7              	18.72%
Bootstrap support for F6PPP8 as seed ortholog is 100%.
Bootstrap support for E1BR64 as seed ortholog is 100%.

Group of orthologs #249. Best score 997 bits
Score difference with first non-orthologous sequence - C.intestinalis:997 G.gallus:997

F6PYU7              	100.00%		F1NHI9              	100.00%
                    	       		F1NKB6              	20.82%
Bootstrap support for F6PYU7 as seed ortholog is 100%.
Bootstrap support for F1NHI9 as seed ortholog is 100%.

Group of orthologs #250. Best score 997 bits
Score difference with first non-orthologous sequence - C.intestinalis:708 G.gallus:860

H2Y2W2              	100.00%		Q90693              	100.00%
Bootstrap support for H2Y2W2 as seed ortholog is 100%.
Bootstrap support for Q90693 as seed ortholog is 100%.

Group of orthologs #251. Best score 993 bits
Score difference with first non-orthologous sequence - C.intestinalis:993 G.gallus:470

F6Y8V9              	100.00%		E1C028              	100.00%
Bootstrap support for F6Y8V9 as seed ortholog is 100%.
Bootstrap support for E1C028 as seed ortholog is 100%.

Group of orthologs #252. Best score 993 bits
Score difference with first non-orthologous sequence - C.intestinalis:993 G.gallus:623

F6XY03              	100.00%		P08110              	100.00%
Bootstrap support for F6XY03 as seed ortholog is 100%.
Bootstrap support for P08110 as seed ortholog is 100%.

Group of orthologs #253. Best score 992 bits
Score difference with first non-orthologous sequence - C.intestinalis:992 G.gallus:992

F6TDD6              	100.00%		F1N8T0              	100.00%
Bootstrap support for F6TDD6 as seed ortholog is 100%.
Bootstrap support for F1N8T0 as seed ortholog is 100%.

Group of orthologs #254. Best score 989 bits
Score difference with first non-orthologous sequence - C.intestinalis:989 G.gallus:989

F7BGT4              	100.00%		E1C817              	100.00%
                    	       		E1BVS1              	9.79%
                    	       		F1NXN2              	6.38%
Bootstrap support for F7BGT4 as seed ortholog is 100%.
Bootstrap support for E1C817 as seed ortholog is 100%.

Group of orthologs #255. Best score 988 bits
Score difference with first non-orthologous sequence - C.intestinalis:988 G.gallus:988

F6UE02              	100.00%		F1P3Q8              	100.00%
Bootstrap support for F6UE02 as seed ortholog is 100%.
Bootstrap support for F1P3Q8 as seed ortholog is 100%.

Group of orthologs #256. Best score 988 bits
Score difference with first non-orthologous sequence - C.intestinalis:809 G.gallus:988

F6W8K8              	100.00%		Q90WU3              	100.00%
Bootstrap support for F6W8K8 as seed ortholog is 100%.
Bootstrap support for Q90WU3 as seed ortholog is 100%.

Group of orthologs #257. Best score 984 bits
Score difference with first non-orthologous sequence - C.intestinalis:765 G.gallus:796

F6TV75              	100.00%		E1C9F3              	100.00%
                    	       		F1N9G5              	32.78%
                    	       		F1NGF2              	8.07%
Bootstrap support for F6TV75 as seed ortholog is 100%.
Bootstrap support for E1C9F3 as seed ortholog is 100%.

Group of orthologs #258. Best score 984 bits
Score difference with first non-orthologous sequence - C.intestinalis:984 G.gallus:288

F6RMI2              	100.00%		F1NKR1              	100.00%
Bootstrap support for F6RMI2 as seed ortholog is 100%.
Bootstrap support for F1NKR1 as seed ortholog is 99%.

Group of orthologs #259. Best score 982 bits
Score difference with first non-orthologous sequence - C.intestinalis:982 G.gallus:982

F6Q6T5              	100.00%		F1NDQ5              	100.00%
                    	       		E1C294              	24.89%
Bootstrap support for F6Q6T5 as seed ortholog is 100%.
Bootstrap support for F1NDQ5 as seed ortholog is 100%.

Group of orthologs #260. Best score 982 bits
Score difference with first non-orthologous sequence - C.intestinalis:982 G.gallus:982

F6QRG3              	100.00%		E1C1B6              	100.00%
Bootstrap support for F6QRG3 as seed ortholog is 100%.
Bootstrap support for E1C1B6 as seed ortholog is 100%.

Group of orthologs #261. Best score 981 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 G.gallus:662

F7B875              	100.00%		Q5F423              	100.00%
Bootstrap support for F7B875 as seed ortholog is 100%.
Bootstrap support for Q5F423 as seed ortholog is 100%.

Group of orthologs #262. Best score 980 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 G.gallus:980

F6T2M3              	100.00%		F1NBP0              	100.00%
                    	       		E1C8N1              	20.64%
Bootstrap support for F6T2M3 as seed ortholog is 68%.
Alternative seed ortholog is F6TNY6 (27 bits away from this cluster)
Bootstrap support for F1NBP0 as seed ortholog is 100%.

Group of orthologs #263. Best score 977 bits
Score difference with first non-orthologous sequence - C.intestinalis:977 G.gallus:724

F6WKV2              	100.00%		E1C8Q7              	100.00%
                    	       		Q9DDD0              	47.34%
Bootstrap support for F6WKV2 as seed ortholog is 100%.
Bootstrap support for E1C8Q7 as seed ortholog is 100%.

Group of orthologs #264. Best score 977 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 G.gallus:747

F6WNB2              	100.00%		E1C963              	100.00%
Bootstrap support for F6WNB2 as seed ortholog is 100%.
Bootstrap support for E1C963 as seed ortholog is 100%.

Group of orthologs #265. Best score 976 bits
Score difference with first non-orthologous sequence - C.intestinalis:976 G.gallus:976

F6YTY3              	100.00%		F1NFW5              	100.00%
Bootstrap support for F6YTY3 as seed ortholog is 100%.
Bootstrap support for F1NFW5 as seed ortholog is 100%.

Group of orthologs #266. Best score 975 bits
Score difference with first non-orthologous sequence - C.intestinalis:975 G.gallus:645

F6YZZ7              	100.00%		E1BZP2              	100.00%
                    	       		F1N879              	21.26%
Bootstrap support for F6YZZ7 as seed ortholog is 100%.
Bootstrap support for E1BZP2 as seed ortholog is 100%.

Group of orthologs #267. Best score 973 bits
Score difference with first non-orthologous sequence - C.intestinalis:636 G.gallus:651

F6THL0              	100.00%		E1C2U4              	100.00%
Bootstrap support for F6THL0 as seed ortholog is 100%.
Bootstrap support for E1C2U4 as seed ortholog is 100%.

Group of orthologs #268. Best score 970 bits
Score difference with first non-orthologous sequence - C.intestinalis:970 G.gallus:745

H2XSA8              	100.00%		E1C2Z8              	100.00%
                    	       		Q5F478              	32.46%
                    	       		Q5ZLC8              	27.56%
Bootstrap support for H2XSA8 as seed ortholog is 100%.
Bootstrap support for E1C2Z8 as seed ortholog is 100%.

Group of orthologs #269. Best score 970 bits
Score difference with first non-orthologous sequence - C.intestinalis:970 G.gallus:970

F6VC80              	100.00%		F1P1F9              	100.00%
                    	       		Q5ZIG5              	31.99%
Bootstrap support for F6VC80 as seed ortholog is 100%.
Bootstrap support for F1P1F9 as seed ortholog is 100%.

Group of orthologs #270. Best score 970 bits
Score difference with first non-orthologous sequence - C.intestinalis:970 G.gallus:830

F7AX97              	100.00%		F1NLQ4              	100.00%
                    	       		F1NAN8              	23.46%
Bootstrap support for F7AX97 as seed ortholog is 100%.
Bootstrap support for F1NLQ4 as seed ortholog is 100%.

Group of orthologs #271. Best score 970 bits
Score difference with first non-orthologous sequence - C.intestinalis:970 G.gallus:228

F6XL93              	100.00%		E1C314              	100.00%
Bootstrap support for F6XL93 as seed ortholog is 100%.
Bootstrap support for E1C314 as seed ortholog is 99%.

Group of orthologs #272. Best score 970 bits
Score difference with first non-orthologous sequence - C.intestinalis:832 G.gallus:245

F6X2D1              	100.00%		E1C7N6              	100.00%
Bootstrap support for F6X2D1 as seed ortholog is 100%.
Bootstrap support for E1C7N6 as seed ortholog is 99%.

Group of orthologs #273. Best score 968 bits
Score difference with first non-orthologous sequence - C.intestinalis:968 G.gallus:968

H2XP00              	100.00%		E1BUM1              	100.00%
Bootstrap support for H2XP00 as seed ortholog is 100%.
Bootstrap support for E1BUM1 as seed ortholog is 100%.

Group of orthologs #274. Best score 968 bits
Score difference with first non-orthologous sequence - C.intestinalis:968 G.gallus:968

F6UXR3              	100.00%		F1P4P8              	100.00%
Bootstrap support for F6UXR3 as seed ortholog is 100%.
Bootstrap support for F1P4P8 as seed ortholog is 100%.

Group of orthologs #275. Best score 968 bits
Score difference with first non-orthologous sequence - C.intestinalis:610 G.gallus:552

F6YUT1              	100.00%		F1P456              	100.00%
Bootstrap support for F6YUT1 as seed ortholog is 100%.
Bootstrap support for F1P456 as seed ortholog is 100%.

Group of orthologs #276. Best score 967 bits
Score difference with first non-orthologous sequence - C.intestinalis:967 G.gallus:967

F6XJU3              	100.00%		F1NNU6              	100.00%
Bootstrap support for F6XJU3 as seed ortholog is 100%.
Bootstrap support for F1NNU6 as seed ortholog is 100%.

Group of orthologs #277. Best score 960 bits
Score difference with first non-orthologous sequence - C.intestinalis:718 G.gallus:332

F6Q5Y8              	100.00%		E1BXT6              	100.00%
Bootstrap support for F6Q5Y8 as seed ortholog is 100%.
Bootstrap support for E1BXT6 as seed ortholog is 100%.

Group of orthologs #278. Best score 960 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 G.gallus:239

F7AKV1              	100.00%		P02640              	100.00%
Bootstrap support for F7AKV1 as seed ortholog is 100%.
Bootstrap support for P02640 as seed ortholog is 100%.

Group of orthologs #279. Best score 956 bits
Score difference with first non-orthologous sequence - C.intestinalis:956 G.gallus:956

F6Y1Q3              	100.00%		Q5ZHS1              	100.00%
Bootstrap support for F6Y1Q3 as seed ortholog is 100%.
Bootstrap support for Q5ZHS1 as seed ortholog is 100%.

Group of orthologs #280. Best score 955 bits
Score difference with first non-orthologous sequence - C.intestinalis:955 G.gallus:955

F7B5A5              	100.00%		F1NRZ6              	100.00%
Bootstrap support for F7B5A5 as seed ortholog is 100%.
Bootstrap support for F1NRZ6 as seed ortholog is 100%.

Group of orthologs #281. Best score 955 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 G.gallus:474

H2Y3E7              	100.00%		O12944              	100.00%
Bootstrap support for H2Y3E7 as seed ortholog is 100%.
Bootstrap support for O12944 as seed ortholog is 100%.

Group of orthologs #282. Best score 954 bits
Score difference with first non-orthologous sequence - C.intestinalis:954 G.gallus:954

F6SI05              	100.00%		F1P372              	100.00%
                    	       		E1BY56              	31.67%
Bootstrap support for F6SI05 as seed ortholog is 100%.
Bootstrap support for F1P372 as seed ortholog is 100%.

Group of orthologs #283. Best score 950 bits
Score difference with first non-orthologous sequence - C.intestinalis:950 G.gallus:678

F7AJJ9              	100.00%		F1NWM8              	100.00%
                    	       		E1C4E0              	53.85%
                    	       		E1C8N3              	45.42%
                    	       		Q6YI48              	34.19%
Bootstrap support for F7AJJ9 as seed ortholog is 100%.
Bootstrap support for F1NWM8 as seed ortholog is 100%.

Group of orthologs #284. Best score 950 bits
Score difference with first non-orthologous sequence - C.intestinalis:950 G.gallus:879

F6W785              	100.00%		F1NKW5              	100.00%
Bootstrap support for F6W785 as seed ortholog is 100%.
Bootstrap support for F1NKW5 as seed ortholog is 100%.

Group of orthologs #285. Best score 947 bits
Score difference with first non-orthologous sequence - C.intestinalis:947 G.gallus:947

F7A2X8              	100.00%		P21872              	100.00%
                    	       		F1P3P6              	37.40%
Bootstrap support for F7A2X8 as seed ortholog is 100%.
Bootstrap support for P21872 as seed ortholog is 100%.

Group of orthologs #286. Best score 941 bits
Score difference with first non-orthologous sequence - C.intestinalis:941 G.gallus:941

F6Z5V2              	100.00%		F1P0U3              	100.00%
Bootstrap support for F6Z5V2 as seed ortholog is 100%.
Bootstrap support for F1P0U3 as seed ortholog is 100%.

Group of orthologs #287. Best score 940 bits
Score difference with first non-orthologous sequence - C.intestinalis:940 G.gallus:940

F6V4V0              	100.00%		Q98930              	100.00%
Bootstrap support for F6V4V0 as seed ortholog is 100%.
Bootstrap support for Q98930 as seed ortholog is 100%.

Group of orthologs #288. Best score 939 bits
Score difference with first non-orthologous sequence - C.intestinalis:939 G.gallus:430

F6TM76              	100.00%		P10039              	100.00%
Bootstrap support for F6TM76 as seed ortholog is 100%.
Bootstrap support for P10039 as seed ortholog is 100%.

Group of orthologs #289. Best score 938 bits
Score difference with first non-orthologous sequence - C.intestinalis:938 G.gallus:386

F6YNJ1              	100.00%		P11501              	100.00%
                    	       		Q04619              	64.02%
Bootstrap support for F6YNJ1 as seed ortholog is 100%.
Bootstrap support for P11501 as seed ortholog is 100%.

Group of orthologs #290. Best score 938 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 G.gallus:608

F6XPL3              	100.00%		F1NIP3              	100.00%
Bootstrap support for F6XPL3 as seed ortholog is 100%.
Bootstrap support for F1NIP3 as seed ortholog is 100%.

Group of orthologs #291. Best score 935 bits
Score difference with first non-orthologous sequence - C.intestinalis:935 G.gallus:935

F6ZBB5              	100.00%		F1NCA2              	100.00%
Bootstrap support for F6ZBB5 as seed ortholog is 100%.
Bootstrap support for F1NCA2 as seed ortholog is 100%.

Group of orthologs #292. Best score 930 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 G.gallus:286

F6XJD6              	100.00%		F1NE85              	100.00%
Bootstrap support for F6XJD6 as seed ortholog is 100%.
Bootstrap support for F1NE85 as seed ortholog is 100%.

Group of orthologs #293. Best score 930 bits
Score difference with first non-orthologous sequence - C.intestinalis:930 G.gallus:930

F6RBT7              	100.00%		Q5ZLD7              	100.00%
Bootstrap support for F6RBT7 as seed ortholog is 100%.
Bootstrap support for Q5ZLD7 as seed ortholog is 100%.

Group of orthologs #294. Best score 928 bits
Score difference with first non-orthologous sequence - C.intestinalis:928 G.gallus:377

F6XQ16              	100.00%		Q5F3X1              	100.00%
                    	       		F1N9K8              	18.35%
Bootstrap support for F6XQ16 as seed ortholog is 100%.
Bootstrap support for Q5F3X1 as seed ortholog is 100%.

Group of orthologs #295. Best score 927 bits
Score difference with first non-orthologous sequence - C.intestinalis:927 G.gallus:927

F6QSK8              	100.00%		Q5F4A0              	100.00%
Bootstrap support for F6QSK8 as seed ortholog is 100%.
Bootstrap support for Q5F4A0 as seed ortholog is 100%.

Group of orthologs #296. Best score 926 bits
Score difference with first non-orthologous sequence - C.intestinalis:926 G.gallus:926

F6QXK6              	100.00%		E1BT30              	100.00%
Bootstrap support for F6QXK6 as seed ortholog is 100%.
Bootstrap support for E1BT30 as seed ortholog is 100%.

Group of orthologs #297. Best score 926 bits
Score difference with first non-orthologous sequence - C.intestinalis:926 G.gallus:926

H2XXY3              	100.00%		E1BVG8              	100.00%
Bootstrap support for H2XXY3 as seed ortholog is 100%.
Bootstrap support for E1BVG8 as seed ortholog is 100%.

Group of orthologs #298. Best score 925 bits
Score difference with first non-orthologous sequence - C.intestinalis:925 G.gallus:801

F6UDW5              	100.00%		E1BYH2              	100.00%
                    	       		Q9I9E0              	36.36%
Bootstrap support for F6UDW5 as seed ortholog is 100%.
Bootstrap support for E1BYH2 as seed ortholog is 100%.

Group of orthologs #299. Best score 924 bits
Score difference with first non-orthologous sequence - C.intestinalis:924 G.gallus:924

F7AFG0              	100.00%		E1BYC6              	100.00%
Bootstrap support for F7AFG0 as seed ortholog is 100%.
Bootstrap support for E1BYC6 as seed ortholog is 100%.

Group of orthologs #300. Best score 921 bits
Score difference with first non-orthologous sequence - C.intestinalis:921 G.gallus:737

F6XUP6              	100.00%		F1NXW4              	100.00%
                    	       		F1N8F2              	26.42%
Bootstrap support for F6XUP6 as seed ortholog is 100%.
Bootstrap support for F1NXW4 as seed ortholog is 100%.

Group of orthologs #301. Best score 920 bits
Score difference with first non-orthologous sequence - C.intestinalis:920 G.gallus:920

F6W6K9              	100.00%		E1BVC3              	100.00%
                    	       		E1BSR3              	57.46%
Bootstrap support for F6W6K9 as seed ortholog is 100%.
Bootstrap support for E1BVC3 as seed ortholog is 100%.

Group of orthologs #302. Best score 918 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:259

F6QR95              	100.00%		Q07496              	100.00%
F6ZVC5              	100.00%		O42422              	100.00%
                    	       		P54755              	35.75%
                    	       		P29318              	33.70%
                    	       		F1NUP4              	29.20%
                    	       		F1NHC4              	28.58%
                    	       		F1NF22              	27.87%
                    	       		P28693              	23.69%
                    	       		Q07498              	16.80%
                    	       		Q07494              	16.71%
                    	       		F1NAX7              	10.04%
                    	       		Q07497              	9.68%
Bootstrap support for F6QR95 as seed ortholog is 84%.
Bootstrap support for F6ZVC5 as seed ortholog is 81%.
Bootstrap support for Q07496 as seed ortholog is 99%.
Bootstrap support for O42422 as seed ortholog is 99%.

Group of orthologs #303. Best score 916 bits
Score difference with first non-orthologous sequence - C.intestinalis:916 G.gallus:916

F6TC91              	100.00%		F1NPW9              	100.00%
                    	       		F1NNI1              	36.97%
Bootstrap support for F6TC91 as seed ortholog is 100%.
Bootstrap support for F1NPW9 as seed ortholog is 100%.

Group of orthologs #304. Best score 916 bits
Score difference with first non-orthologous sequence - C.intestinalis:916 G.gallus:916

F6W453              	100.00%		E1C6A9              	100.00%
Bootstrap support for F6W453 as seed ortholog is 100%.
Bootstrap support for E1C6A9 as seed ortholog is 100%.

Group of orthologs #305. Best score 913 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 G.gallus:30

F7B0Q2              	100.00%		F1N9J7              	100.00%
F6QB29              	58.33%		
Bootstrap support for F7B0Q2 as seed ortholog is 68%.
Alternative seed ortholog is F6SJ24 (6 bits away from this cluster)
Bootstrap support for F1N9J7 as seed ortholog is 80%.

Group of orthologs #306. Best score 913 bits
Score difference with first non-orthologous sequence - C.intestinalis:913 G.gallus:913

F6YWF1              	100.00%		E1C8G3              	100.00%
Bootstrap support for F6YWF1 as seed ortholog is 100%.
Bootstrap support for E1C8G3 as seed ortholog is 100%.

Group of orthologs #307. Best score 912 bits
Score difference with first non-orthologous sequence - C.intestinalis:554 G.gallus:578

F6X189              	100.00%		F1NRG5              	100.00%
Bootstrap support for F6X189 as seed ortholog is 100%.
Bootstrap support for F1NRG5 as seed ortholog is 100%.

Group of orthologs #308. Best score 909 bits
Score difference with first non-orthologous sequence - C.intestinalis:909 G.gallus:909

H2XJF2              	100.00%		E1BYT4              	100.00%
Bootstrap support for H2XJF2 as seed ortholog is 100%.
Bootstrap support for E1BYT4 as seed ortholog is 100%.

Group of orthologs #309. Best score 907 bits
Score difference with first non-orthologous sequence - C.intestinalis:907 G.gallus:907

F6QIR4              	100.00%		F1NF33              	100.00%
Bootstrap support for F6QIR4 as seed ortholog is 100%.
Bootstrap support for F1NF33 as seed ortholog is 100%.

Group of orthologs #310. Best score 906 bits
Score difference with first non-orthologous sequence - C.intestinalis:906 G.gallus:906

F6YIU2              	100.00%		Q5F3X8              	100.00%
                    	       		E1BXC8              	13.87%
Bootstrap support for F6YIU2 as seed ortholog is 100%.
Bootstrap support for Q5F3X8 as seed ortholog is 100%.

Group of orthologs #311. Best score 904 bits
Score difference with first non-orthologous sequence - C.intestinalis:600 G.gallus:392

F6UGA6              	100.00%		F1P0L2              	100.00%
                    	       		Q5ZLM5              	42.26%
Bootstrap support for F6UGA6 as seed ortholog is 100%.
Bootstrap support for F1P0L2 as seed ortholog is 100%.

Group of orthologs #312. Best score 903 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 G.gallus:545

F7AAM4              	100.00%		F1NBJ7              	100.00%
Bootstrap support for F7AAM4 as seed ortholog is 99%.
Bootstrap support for F1NBJ7 as seed ortholog is 100%.

Group of orthologs #313. Best score 901 bits
Score difference with first non-orthologous sequence - C.intestinalis:523 G.gallus:12

L7N0T3              	100.00%		G1K342              	100.00%
F6SYL0              	25.00%		
Bootstrap support for L7N0T3 as seed ortholog is 100%.
Bootstrap support for G1K342 as seed ortholog is 97%.

Group of orthologs #314. Best score 900 bits
Score difference with first non-orthologous sequence - C.intestinalis:772 G.gallus:66

F6V6N1              	100.00%		F1NDJ6              	100.00%
Bootstrap support for F6V6N1 as seed ortholog is 100%.
Bootstrap support for F1NDJ6 as seed ortholog is 86%.

Group of orthologs #315. Best score 899 bits
Score difference with first non-orthologous sequence - C.intestinalis:899 G.gallus:502

H2XWN8              	100.00%		F1NVD1              	100.00%
                    	       		F1NQ88              	35.90%
                    	       		F1N9Z1              	28.08%
Bootstrap support for H2XWN8 as seed ortholog is 100%.
Bootstrap support for F1NVD1 as seed ortholog is 100%.

Group of orthologs #316. Best score 899 bits
Score difference with first non-orthologous sequence - C.intestinalis:899 G.gallus:899

F6UDU8              	100.00%		E1C168              	100.00%
Bootstrap support for F6UDU8 as seed ortholog is 100%.
Bootstrap support for E1C168 as seed ortholog is 100%.

Group of orthologs #317. Best score 899 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 G.gallus:442

Q1RL48              	100.00%		E1C2G3              	100.00%
Bootstrap support for Q1RL48 as seed ortholog is 100%.
Bootstrap support for E1C2G3 as seed ortholog is 100%.

Group of orthologs #318. Best score 897 bits
Score difference with first non-orthologous sequence - C.intestinalis:897 G.gallus:897

F6XLA1              	100.00%		E1C0A5              	100.00%
                    	       		E1BSE7              	22.66%
                    	       		F1P2H3              	14.90%
Bootstrap support for F6XLA1 as seed ortholog is 100%.
Bootstrap support for E1C0A5 as seed ortholog is 100%.

Group of orthologs #319. Best score 897 bits
Score difference with first non-orthologous sequence - C.intestinalis:897 G.gallus:654

F6SSP0              	100.00%		F1NDA9              	100.00%
Bootstrap support for F6SSP0 as seed ortholog is 100%.
Bootstrap support for F1NDA9 as seed ortholog is 100%.

Group of orthologs #320. Best score 896 bits
Score difference with first non-orthologous sequence - C.intestinalis:519 G.gallus:375

F6SM21              	100.00%		Q5ZKD9              	100.00%
Bootstrap support for F6SM21 as seed ortholog is 100%.
Bootstrap support for Q5ZKD9 as seed ortholog is 100%.

Group of orthologs #321. Best score 895 bits
Score difference with first non-orthologous sequence - C.intestinalis:895 G.gallus:895

F6SC38              	100.00%		E1BUG2              	100.00%
Bootstrap support for F6SC38 as seed ortholog is 100%.
Bootstrap support for E1BUG2 as seed ortholog is 100%.

Group of orthologs #322. Best score 895 bits
Score difference with first non-orthologous sequence - C.intestinalis:895 G.gallus:535

F6PMK8              	100.00%		E1C255              	100.00%
Bootstrap support for F6PMK8 as seed ortholog is 100%.
Bootstrap support for E1C255 as seed ortholog is 100%.

Group of orthologs #323. Best score 894 bits
Score difference with first non-orthologous sequence - C.intestinalis:894 G.gallus:894

F6RHH3              	100.00%		E1BSA7              	100.00%
                    	       		E1BXM2              	23.08%
Bootstrap support for F6RHH3 as seed ortholog is 100%.
Bootstrap support for E1BSA7 as seed ortholog is 100%.

Group of orthologs #324. Best score 893 bits
Score difference with first non-orthologous sequence - C.intestinalis:893 G.gallus:893

F6TNP4              	100.00%		F1NCT5              	100.00%
Bootstrap support for F6TNP4 as seed ortholog is 100%.
Bootstrap support for F1NCT5 as seed ortholog is 100%.

Group of orthologs #325. Best score 891 bits
Score difference with first non-orthologous sequence - C.intestinalis:891 G.gallus:891

F6YIR9              	100.00%		F1NZ57              	100.00%
Bootstrap support for F6YIR9 as seed ortholog is 100%.
Bootstrap support for F1NZ57 as seed ortholog is 100%.

Group of orthologs #326. Best score 891 bits
Score difference with first non-orthologous sequence - C.intestinalis:891 G.gallus:891

F7B690              	100.00%		P35458              	100.00%
Bootstrap support for F7B690 as seed ortholog is 100%.
Bootstrap support for P35458 as seed ortholog is 100%.

Group of orthologs #327. Best score 890 bits
Score difference with first non-orthologous sequence - C.intestinalis:890 G.gallus:825

F6Z3U3              	100.00%		E1C7T8              	100.00%
                    	       		F1NB52              	66.87%
Bootstrap support for F6Z3U3 as seed ortholog is 100%.
Bootstrap support for E1C7T8 as seed ortholog is 100%.

Group of orthologs #328. Best score 886 bits
Score difference with first non-orthologous sequence - C.intestinalis:886 G.gallus:886

F6ULY5              	100.00%		F1NH24              	100.00%
Bootstrap support for F6ULY5 as seed ortholog is 100%.
Bootstrap support for F1NH24 as seed ortholog is 100%.

Group of orthologs #329. Best score 885 bits
Score difference with first non-orthologous sequence - C.intestinalis:885 G.gallus:885

F6ZW95              	100.00%		F1N9K0              	100.00%
Bootstrap support for F6ZW95 as seed ortholog is 100%.
Bootstrap support for F1N9K0 as seed ortholog is 100%.

Group of orthologs #330. Best score 881 bits
Score difference with first non-orthologous sequence - C.intestinalis:881 G.gallus:881

F7BAZ7              	100.00%		E1BQS3              	100.00%
                    	       		E1C7I6              	31.31%
Bootstrap support for F7BAZ7 as seed ortholog is 100%.
Bootstrap support for E1BQS3 as seed ortholog is 100%.

Group of orthologs #331. Best score 881 bits
Score difference with first non-orthologous sequence - C.intestinalis:881 G.gallus:881

F6QD44              	100.00%		E1BX74              	100.00%
Bootstrap support for F6QD44 as seed ortholog is 100%.
Bootstrap support for E1BX74 as seed ortholog is 100%.

Group of orthologs #332. Best score 880 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 G.gallus:880

F6Z6L6              	100.00%		F1P0M2              	100.00%
Bootstrap support for F6Z6L6 as seed ortholog is 100%.
Bootstrap support for F1P0M2 as seed ortholog is 100%.

Group of orthologs #333. Best score 879 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 G.gallus:766

F7AED7              	100.00%		E1BZI1              	100.00%
Bootstrap support for F7AED7 as seed ortholog is 100%.
Bootstrap support for E1BZI1 as seed ortholog is 100%.

Group of orthologs #334. Best score 878 bits
Score difference with first non-orthologous sequence - C.intestinalis:878 G.gallus:878

F6QZB5              	100.00%		Q5ZIH0              	100.00%
Bootstrap support for F6QZB5 as seed ortholog is 100%.
Bootstrap support for Q5ZIH0 as seed ortholog is 100%.

Group of orthologs #335. Best score 877 bits
Score difference with first non-orthologous sequence - C.intestinalis:877 G.gallus:778

F6SBG8              	100.00%		E1C8W4              	100.00%
                    	       		E1BY77              	23.57%
Bootstrap support for F6SBG8 as seed ortholog is 100%.
Bootstrap support for E1C8W4 as seed ortholog is 100%.

Group of orthologs #336. Best score 877 bits
Score difference with first non-orthologous sequence - C.intestinalis:590 G.gallus:695

F6QX34              	100.00%		F1NKN0              	100.00%
Bootstrap support for F6QX34 as seed ortholog is 100%.
Bootstrap support for F1NKN0 as seed ortholog is 100%.

Group of orthologs #337. Best score 877 bits
Score difference with first non-orthologous sequence - C.intestinalis:877 G.gallus:629

F6ZZZ6              	100.00%		E1C4H7              	100.00%
Bootstrap support for F6ZZZ6 as seed ortholog is 100%.
Bootstrap support for E1C4H7 as seed ortholog is 100%.

Group of orthologs #338. Best score 877 bits
Score difference with first non-orthologous sequence - C.intestinalis:877 G.gallus:877

Q32TF6              	100.00%		Q32TG3              	100.00%
Bootstrap support for Q32TF6 as seed ortholog is 100%.
Bootstrap support for Q32TG3 as seed ortholog is 100%.

Group of orthologs #339. Best score 875 bits
Score difference with first non-orthologous sequence - C.intestinalis:875 G.gallus:875

F7BBN1              	100.00%		F1NPR8              	100.00%
                    	       		E1C8P2              	30.55%
Bootstrap support for F7BBN1 as seed ortholog is 100%.
Bootstrap support for F1NPR8 as seed ortholog is 100%.

Group of orthologs #340. Best score 875 bits
Score difference with first non-orthologous sequence - C.intestinalis:875 G.gallus:875

F6WF19              	100.00%		Q5F4B9              	100.00%
Bootstrap support for F6WF19 as seed ortholog is 100%.
Bootstrap support for Q5F4B9 as seed ortholog is 100%.

Group of orthologs #341. Best score 872 bits
Score difference with first non-orthologous sequence - C.intestinalis:872 G.gallus:872

F6PKJ4              	100.00%		Q5ZJZ6              	100.00%
Bootstrap support for F6PKJ4 as seed ortholog is 100%.
Bootstrap support for Q5ZJZ6 as seed ortholog is 100%.

Group of orthologs #342. Best score 872 bits
Score difference with first non-orthologous sequence - C.intestinalis:872 G.gallus:74

F6ZZF2              	100.00%		P05153              	100.00%
Bootstrap support for F6ZZF2 as seed ortholog is 100%.
Bootstrap support for P05153 as seed ortholog is 95%.

Group of orthologs #343. Best score 872 bits
Score difference with first non-orthologous sequence - C.intestinalis:872 G.gallus:578

H2Y2C6              	100.00%		F1NRB3              	100.00%
Bootstrap support for H2Y2C6 as seed ortholog is 100%.
Bootstrap support for F1NRB3 as seed ortholog is 100%.

Group of orthologs #344. Best score 871 bits
Score difference with first non-orthologous sequence - C.intestinalis:871 G.gallus:244

F6WUP4              	100.00%		Q00944              	100.00%
Bootstrap support for F6WUP4 as seed ortholog is 100%.
Bootstrap support for Q00944 as seed ortholog is 99%.

Group of orthologs #345. Best score 870 bits
Score difference with first non-orthologous sequence - C.intestinalis:870 G.gallus:658

F6UCG0              	100.00%		F1NFH4              	100.00%
Bootstrap support for F6UCG0 as seed ortholog is 100%.
Bootstrap support for F1NFH4 as seed ortholog is 100%.

Group of orthologs #346. Best score 869 bits
Score difference with first non-orthologous sequence - C.intestinalis:869 G.gallus:699

F7AT12              	100.00%		E1C5B7              	100.00%
                    	       		F1P065              	28.18%
Bootstrap support for F7AT12 as seed ortholog is 100%.
Bootstrap support for E1C5B7 as seed ortholog is 100%.

Group of orthologs #347. Best score 868 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 G.gallus:432

F6R6G1              	100.00%		Q5ZJL1              	100.00%
                    	       		E1C6M1              	40.55%
Bootstrap support for F6R6G1 as seed ortholog is 100%.
Bootstrap support for Q5ZJL1 as seed ortholog is 100%.

Group of orthologs #348. Best score 868 bits
Score difference with first non-orthologous sequence - C.intestinalis:868 G.gallus:868

F6PZR6              	100.00%		E1C3C7              	100.00%
Bootstrap support for F6PZR6 as seed ortholog is 100%.
Bootstrap support for E1C3C7 as seed ortholog is 100%.

Group of orthologs #349. Best score 867 bits
Score difference with first non-orthologous sequence - C.intestinalis:867 G.gallus:867

H2Y100              	100.00%		Q5ZI89              	100.00%
Bootstrap support for H2Y100 as seed ortholog is 100%.
Bootstrap support for Q5ZI89 as seed ortholog is 100%.

Group of orthologs #350. Best score 866 bits
Score difference with first non-orthologous sequence - C.intestinalis:866 G.gallus:866

F6R5F9              	100.00%		F1NFI2              	100.00%
Bootstrap support for F6R5F9 as seed ortholog is 100%.
Bootstrap support for F1NFI2 as seed ortholog is 100%.

Group of orthologs #351. Best score 866 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 G.gallus:195

F6R9X0              	100.00%		F1NG93              	100.00%
Bootstrap support for F6R9X0 as seed ortholog is 99%.
Bootstrap support for F1NG93 as seed ortholog is 99%.

Group of orthologs #352. Best score 866 bits
Score difference with first non-orthologous sequence - C.intestinalis:866 G.gallus:866

F6WPI9              	100.00%		F1NAC9              	100.00%
Bootstrap support for F6WPI9 as seed ortholog is 100%.
Bootstrap support for F1NAC9 as seed ortholog is 100%.

Group of orthologs #353. Best score 865 bits
Score difference with first non-orthologous sequence - C.intestinalis:865 G.gallus:865

F6TGK6              	100.00%		F1NMN0              	100.00%
Bootstrap support for F6TGK6 as seed ortholog is 100%.
Bootstrap support for F1NMN0 as seed ortholog is 100%.

Group of orthologs #354. Best score 864 bits
Score difference with first non-orthologous sequence - C.intestinalis:778 G.gallus:770

F6WIG7              	100.00%		Q5ZME8              	100.00%
Bootstrap support for F6WIG7 as seed ortholog is 100%.
Bootstrap support for Q5ZME8 as seed ortholog is 100%.

Group of orthologs #355. Best score 863 bits
Score difference with first non-orthologous sequence - C.intestinalis:863 G.gallus:320

H2Y1I5              	100.00%		E1C1G0              	100.00%
                    	       		F1NUN7              	17.79%
Bootstrap support for H2Y1I5 as seed ortholog is 100%.
Bootstrap support for E1C1G0 as seed ortholog is 99%.

Group of orthologs #356. Best score 863 bits
Score difference with first non-orthologous sequence - C.intestinalis:863 G.gallus:863

F6T2R5              	100.00%		E1C262              	100.00%
Bootstrap support for F6T2R5 as seed ortholog is 100%.
Bootstrap support for E1C262 as seed ortholog is 100%.

Group of orthologs #357. Best score 863 bits
Score difference with first non-orthologous sequence - C.intestinalis:563 G.gallus:627

F7AJ84              	100.00%		E1BTT7              	100.00%
Bootstrap support for F7AJ84 as seed ortholog is 100%.
Bootstrap support for E1BTT7 as seed ortholog is 100%.

Group of orthologs #358. Best score 863 bits
Score difference with first non-orthologous sequence - C.intestinalis:863 G.gallus:863

F6Q2H6              	100.00%		Q02391              	100.00%
Bootstrap support for F6Q2H6 as seed ortholog is 100%.
Bootstrap support for Q02391 as seed ortholog is 100%.

Group of orthologs #359. Best score 863 bits
Score difference with first non-orthologous sequence - C.intestinalis:863 G.gallus:863

Q1RL58              	100.00%		F1P394              	100.00%
Bootstrap support for Q1RL58 as seed ortholog is 100%.
Bootstrap support for F1P394 as seed ortholog is 100%.

Group of orthologs #360. Best score 862 bits
Score difference with first non-orthologous sequence - C.intestinalis:862 G.gallus:862

F6Q9P9              	100.00%		F1NRK5              	100.00%
Bootstrap support for F6Q9P9 as seed ortholog is 100%.
Bootstrap support for F1NRK5 as seed ortholog is 100%.

Group of orthologs #361. Best score 861 bits
Score difference with first non-orthologous sequence - C.intestinalis:861 G.gallus:734

H2XJU0              	100.00%		Q5F3L1              	100.00%
Bootstrap support for H2XJU0 as seed ortholog is 100%.
Bootstrap support for Q5F3L1 as seed ortholog is 100%.

Group of orthologs #362. Best score 860 bits
Score difference with first non-orthologous sequence - C.intestinalis:860 G.gallus:860

F7APA8              	100.00%		F1NGB8              	100.00%
Bootstrap support for F7APA8 as seed ortholog is 100%.
Bootstrap support for F1NGB8 as seed ortholog is 100%.

Group of orthologs #363. Best score 859 bits
Score difference with first non-orthologous sequence - C.intestinalis:859 G.gallus:859

F6WN68              	100.00%		F1NUS8              	100.00%
Bootstrap support for F6WN68 as seed ortholog is 100%.
Bootstrap support for F1NUS8 as seed ortholog is 100%.

Group of orthologs #364. Best score 858 bits
Score difference with first non-orthologous sequence - C.intestinalis:858 G.gallus:654

F6V8A8              	100.00%		E1C6T4              	100.00%
                    	       		F1NHL1              	35.31%
Bootstrap support for F6V8A8 as seed ortholog is 100%.
Bootstrap support for E1C6T4 as seed ortholog is 100%.

Group of orthologs #365. Best score 854 bits
Score difference with first non-orthologous sequence - C.intestinalis:854 G.gallus:676

F6UKC4              	100.00%		F1P0J0              	100.00%
Bootstrap support for F6UKC4 as seed ortholog is 100%.
Bootstrap support for F1P0J0 as seed ortholog is 100%.

Group of orthologs #366. Best score 852 bits
Score difference with first non-orthologous sequence - C.intestinalis:852 G.gallus:852

F6R854              	100.00%		F1NK58              	100.00%
Bootstrap support for F6R854 as seed ortholog is 100%.
Bootstrap support for F1NK58 as seed ortholog is 100%.

Group of orthologs #367. Best score 851 bits
Score difference with first non-orthologous sequence - C.intestinalis:851 G.gallus:851

F6YQL6              	100.00%		F1NYI3              	100.00%
Bootstrap support for F6YQL6 as seed ortholog is 100%.
Bootstrap support for F1NYI3 as seed ortholog is 100%.

Group of orthologs #368. Best score 850 bits
Score difference with first non-orthologous sequence - C.intestinalis:850 G.gallus:850

F6WFB4              	100.00%		E1BYQ4              	100.00%
                    	       		E1BQI7              	57.85%
                    	       		F1NH13              	48.72%
                    	       		E1BSM1              	46.36%
Bootstrap support for F6WFB4 as seed ortholog is 100%.
Bootstrap support for E1BYQ4 as seed ortholog is 100%.

Group of orthologs #369. Best score 850 bits
Score difference with first non-orthologous sequence - C.intestinalis:547 G.gallus:850

F7AXK5              	100.00%		E1C003              	100.00%
Bootstrap support for F7AXK5 as seed ortholog is 100%.
Bootstrap support for E1C003 as seed ortholog is 100%.

Group of orthologs #370. Best score 850 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 G.gallus:170

F7B8G8              	100.00%		Q5ZJK8              	100.00%
Bootstrap support for F7B8G8 as seed ortholog is 100%.
Bootstrap support for Q5ZJK8 as seed ortholog is 100%.

Group of orthologs #371. Best score 849 bits
Score difference with first non-orthologous sequence - C.intestinalis:559 G.gallus:579

F6U113              	100.00%		E1C0H5              	100.00%
                    	       		F1NC26              	33.74%
                    	       		E1BT08              	23.44%
Bootstrap support for F6U113 as seed ortholog is 100%.
Bootstrap support for E1C0H5 as seed ortholog is 100%.

Group of orthologs #372. Best score 848 bits
Score difference with first non-orthologous sequence - C.intestinalis:675 G.gallus:848

F7B2M5              	100.00%		Q5ZKA2              	100.00%
Bootstrap support for F7B2M5 as seed ortholog is 100%.
Bootstrap support for Q5ZKA2 as seed ortholog is 100%.

Group of orthologs #373. Best score 846 bits
Score difference with first non-orthologous sequence - C.intestinalis:846 G.gallus:846

F6UWK1              	100.00%		Q5ZI87              	100.00%
Bootstrap support for F6UWK1 as seed ortholog is 100%.
Bootstrap support for Q5ZI87 as seed ortholog is 100%.

Group of orthologs #374. Best score 845 bits
Score difference with first non-orthologous sequence - C.intestinalis:845 G.gallus:845

H2XVP1              	100.00%		E1C0P9              	100.00%
Bootstrap support for H2XVP1 as seed ortholog is 100%.
Bootstrap support for E1C0P9 as seed ortholog is 100%.

Group of orthologs #375. Best score 842 bits
Score difference with first non-orthologous sequence - C.intestinalis:842 G.gallus:842

F6T1J8              	100.00%		F1P2T2              	100.00%
Bootstrap support for F6T1J8 as seed ortholog is 100%.
Bootstrap support for F1P2T2 as seed ortholog is 100%.

Group of orthologs #376. Best score 842 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 G.gallus:241

L7N0S7              	100.00%		F1NGA2              	100.00%
Bootstrap support for L7N0S7 as seed ortholog is 100%.
Bootstrap support for F1NGA2 as seed ortholog is 100%.

Group of orthologs #377. Best score 841 bits
Score difference with first non-orthologous sequence - C.intestinalis:841 G.gallus:841

F6RNR5              	100.00%		F1NSB2              	100.00%
                    	       		H9KZH9              	32.59%
Bootstrap support for F6RNR5 as seed ortholog is 100%.
Bootstrap support for F1NSB2 as seed ortholog is 100%.

Group of orthologs #378. Best score 841 bits
Score difference with first non-orthologous sequence - C.intestinalis:752 G.gallus:754

F7A8C2              	100.00%		F1NU21              	100.00%
                    	       		P49712              	21.26%
Bootstrap support for F7A8C2 as seed ortholog is 100%.
Bootstrap support for F1NU21 as seed ortholog is 100%.

Group of orthologs #379. Best score 841 bits
Score difference with first non-orthologous sequence - C.intestinalis:841 G.gallus:707

F6S1D4              	100.00%		E1BZL5              	100.00%
Bootstrap support for F6S1D4 as seed ortholog is 100%.
Bootstrap support for E1BZL5 as seed ortholog is 100%.

Group of orthologs #380. Best score 841 bits
Score difference with first non-orthologous sequence - C.intestinalis:747 G.gallus:305

F7B0S6              	100.00%		F1NST1              	100.00%
Bootstrap support for F7B0S6 as seed ortholog is 100%.
Bootstrap support for F1NST1 as seed ortholog is 100%.

Group of orthologs #381. Best score 839 bits
Score difference with first non-orthologous sequence - C.intestinalis:839 G.gallus:728

F6SGI6              	100.00%		E1BY84              	100.00%
Bootstrap support for F6SGI6 as seed ortholog is 100%.
Bootstrap support for E1BY84 as seed ortholog is 100%.

Group of orthologs #382. Best score 839 bits
Score difference with first non-orthologous sequence - C.intestinalis:839 G.gallus:839

F6TRN8              	100.00%		F1NPS0              	100.00%
Bootstrap support for F6TRN8 as seed ortholog is 100%.
Bootstrap support for F1NPS0 as seed ortholog is 100%.

Group of orthologs #383. Best score 839 bits
Score difference with first non-orthologous sequence - C.intestinalis:839 G.gallus:795

F6XCG6              	100.00%		F1NKR5              	100.00%
Bootstrap support for F6XCG6 as seed ortholog is 100%.
Bootstrap support for F1NKR5 as seed ortholog is 100%.

Group of orthologs #384. Best score 839 bits
Score difference with first non-orthologous sequence - C.intestinalis:839 G.gallus:839

H2XZM0              	100.00%		F1NG87              	100.00%
Bootstrap support for H2XZM0 as seed ortholog is 100%.
Bootstrap support for F1NG87 as seed ortholog is 100%.

Group of orthologs #385. Best score 836 bits
Score difference with first non-orthologous sequence - C.intestinalis:836 G.gallus:260

F7ABV6              	100.00%		F1NY12              	100.00%
                    	       		F1NJJ1              	27.68%
                    	       		F1N9R5              	23.13%
Bootstrap support for F7ABV6 as seed ortholog is 100%.
Bootstrap support for F1NY12 as seed ortholog is 99%.

Group of orthologs #386. Best score 836 bits
Score difference with first non-orthologous sequence - C.intestinalis:836 G.gallus:81

F6W2C6              	100.00%		E1C6A7              	100.00%
Bootstrap support for F6W2C6 as seed ortholog is 100%.
Bootstrap support for E1C6A7 as seed ortholog is 71%.
Alternative seed ortholog is F1NJM6 (81 bits away from this cluster)

Group of orthologs #387. Best score 836 bits
Score difference with first non-orthologous sequence - C.intestinalis:836 G.gallus:551

H2XXZ3              	100.00%		E1BYA8              	100.00%
Bootstrap support for H2XXZ3 as seed ortholog is 100%.
Bootstrap support for E1BYA8 as seed ortholog is 100%.

Group of orthologs #388. Best score 835 bits
Score difference with first non-orthologous sequence - C.intestinalis:835 G.gallus:555

H2XPG6              	100.00%		F1NCH3              	100.00%
                    	       		E1C514              	26.32%
Bootstrap support for H2XPG6 as seed ortholog is 100%.
Bootstrap support for F1NCH3 as seed ortholog is 100%.

Group of orthologs #389. Best score 835 bits
Score difference with first non-orthologous sequence - C.intestinalis:835 G.gallus:835

F6XTJ3              	100.00%		F1NZZ8              	100.00%
Bootstrap support for F6XTJ3 as seed ortholog is 100%.
Bootstrap support for F1NZZ8 as seed ortholog is 100%.

Group of orthologs #390. Best score 834 bits
Score difference with first non-orthologous sequence - C.intestinalis:834 G.gallus:497

F6SUC9              	100.00%		F1P420              	100.00%
                    	       		F1NM47              	36.36%
Bootstrap support for F6SUC9 as seed ortholog is 100%.
Bootstrap support for F1P420 as seed ortholog is 100%.

Group of orthologs #391. Best score 834 bits
Score difference with first non-orthologous sequence - C.intestinalis:834 G.gallus:834

F6SI53              	100.00%		Q9YHT1              	100.00%
Bootstrap support for F6SI53 as seed ortholog is 100%.
Bootstrap support for Q9YHT1 as seed ortholog is 100%.

Group of orthologs #392. Best score 833 bits
Score difference with first non-orthologous sequence - C.intestinalis:833 G.gallus:833

F6T2D0              	100.00%		Q5ZKU4              	100.00%
Bootstrap support for F6T2D0 as seed ortholog is 100%.
Bootstrap support for Q5ZKU4 as seed ortholog is 100%.

Group of orthologs #393. Best score 832 bits
Score difference with first non-orthologous sequence - C.intestinalis:832 G.gallus:832

F7ANB6              	100.00%		F1NET7              	100.00%
Bootstrap support for F7ANB6 as seed ortholog is 100%.
Bootstrap support for F1NET7 as seed ortholog is 100%.

Group of orthologs #394. Best score 832 bits
Score difference with first non-orthologous sequence - C.intestinalis:731 G.gallus:97

H2XYN5              	100.00%		E1BZT9              	100.00%
Bootstrap support for H2XYN5 as seed ortholog is 100%.
Bootstrap support for E1BZT9 as seed ortholog is 99%.

Group of orthologs #395. Best score 831 bits
Score difference with first non-orthologous sequence - C.intestinalis:707 G.gallus:660

F6PLQ2              	100.00%		E1BT38              	100.00%
                    	       		F1NPX2              	24.68%
                    	       		F1NB97              	8.36%
Bootstrap support for F6PLQ2 as seed ortholog is 100%.
Bootstrap support for E1BT38 as seed ortholog is 100%.

Group of orthologs #396. Best score 829 bits
Score difference with first non-orthologous sequence - C.intestinalis:829 G.gallus:829

F6T0L0              	100.00%		F1P060              	100.00%
                    	       		E1BWX8              	31.79%
Bootstrap support for F6T0L0 as seed ortholog is 100%.
Bootstrap support for F1P060 as seed ortholog is 100%.

Group of orthologs #397. Best score 829 bits
Score difference with first non-orthologous sequence - C.intestinalis:829 G.gallus:829

F6PRK2              	100.00%		F1NDU8              	100.00%
Bootstrap support for F6PRK2 as seed ortholog is 100%.
Bootstrap support for F1NDU8 as seed ortholog is 100%.

Group of orthologs #398. Best score 829 bits
Score difference with first non-orthologous sequence - C.intestinalis:829 G.gallus:829

H2Y323              	100.00%		F1NGY1              	100.00%
Bootstrap support for H2Y323 as seed ortholog is 100%.
Bootstrap support for F1NGY1 as seed ortholog is 100%.

Group of orthologs #399. Best score 828 bits
Score difference with first non-orthologous sequence - C.intestinalis:828 G.gallus:828

F6TA53              	100.00%		F1NJP9              	100.00%
Bootstrap support for F6TA53 as seed ortholog is 100%.
Bootstrap support for F1NJP9 as seed ortholog is 100%.

Group of orthologs #400. Best score 826 bits
Score difference with first non-orthologous sequence - C.intestinalis:566 G.gallus:603

H2XVY7              	100.00%		F1P5K7              	100.00%
Bootstrap support for H2XVY7 as seed ortholog is 100%.
Bootstrap support for F1P5K7 as seed ortholog is 100%.

Group of orthologs #401. Best score 825 bits
Score difference with first non-orthologous sequence - C.intestinalis:825 G.gallus:397

F6UP49              	100.00%		E1C5D5              	100.00%
Bootstrap support for F6UP49 as seed ortholog is 100%.
Bootstrap support for E1C5D5 as seed ortholog is 100%.

Group of orthologs #402. Best score 825 bits
Score difference with first non-orthologous sequence - C.intestinalis:825 G.gallus:825

F7AFD2              	100.00%		F1NY75              	100.00%
Bootstrap support for F7AFD2 as seed ortholog is 100%.
Bootstrap support for F1NY75 as seed ortholog is 100%.

Group of orthologs #403. Best score 824 bits
Score difference with first non-orthologous sequence - C.intestinalis:824 G.gallus:824

F6TBG7              	100.00%		F1NBV9              	100.00%
                    	       		E1BSB9              	33.35%
Bootstrap support for F6TBG7 as seed ortholog is 100%.
Bootstrap support for F1NBV9 as seed ortholog is 100%.

Group of orthologs #404. Best score 824 bits
Score difference with first non-orthologous sequence - C.intestinalis:676 G.gallus:762

Q86SD3              	100.00%		F1NYG1              	100.00%
                    	       		E1BWK2              	22.27%
Bootstrap support for Q86SD3 as seed ortholog is 100%.
Bootstrap support for F1NYG1 as seed ortholog is 100%.

Group of orthologs #405. Best score 824 bits
Score difference with first non-orthologous sequence - C.intestinalis:824 G.gallus:824

F6THC9              	100.00%		E1BST9              	100.00%
Bootstrap support for F6THC9 as seed ortholog is 100%.
Bootstrap support for E1BST9 as seed ortholog is 100%.

Group of orthologs #406. Best score 824 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 G.gallus:79

F6V7V9              	100.00%		E1BRG5              	100.00%
Bootstrap support for F6V7V9 as seed ortholog is 100%.
Bootstrap support for E1BRG5 as seed ortholog is 98%.

Group of orthologs #407. Best score 824 bits
Score difference with first non-orthologous sequence - C.intestinalis:824 G.gallus:824

F6ZQ20              	100.00%		F1NBI1              	100.00%
Bootstrap support for F6ZQ20 as seed ortholog is 100%.
Bootstrap support for F1NBI1 as seed ortholog is 100%.

Group of orthologs #408. Best score 822 bits
Score difference with first non-orthologous sequence - C.intestinalis:822 G.gallus:822

F7ADU2              	100.00%		E1C027              	100.00%
Bootstrap support for F7ADU2 as seed ortholog is 100%.
Bootstrap support for E1C027 as seed ortholog is 100%.

Group of orthologs #409. Best score 822 bits
Score difference with first non-orthologous sequence - C.intestinalis:822 G.gallus:822

F6YRI1              	100.00%		E1C5U3              	100.00%
Bootstrap support for F6YRI1 as seed ortholog is 100%.
Bootstrap support for E1C5U3 as seed ortholog is 100%.

Group of orthologs #410. Best score 822 bits
Score difference with first non-orthologous sequence - C.intestinalis:822 G.gallus:822

F6XJ08              	100.00%		F1NE72              	100.00%
Bootstrap support for F6XJ08 as seed ortholog is 100%.
Bootstrap support for F1NE72 as seed ortholog is 100%.

Group of orthologs #411. Best score 822 bits
Score difference with first non-orthologous sequence - C.intestinalis:822 G.gallus:822

F6ZWA3              	100.00%		F1NQ70              	100.00%
Bootstrap support for F6ZWA3 as seed ortholog is 100%.
Bootstrap support for F1NQ70 as seed ortholog is 100%.

Group of orthologs #412. Best score 822 bits
Score difference with first non-orthologous sequence - C.intestinalis:822 G.gallus:822

F7BJC2              	100.00%		Q5ZMA6              	100.00%
Bootstrap support for F7BJC2 as seed ortholog is 100%.
Bootstrap support for Q5ZMA6 as seed ortholog is 100%.

Group of orthologs #413. Best score 820 bits
Score difference with first non-orthologous sequence - C.intestinalis:820 G.gallus:820

F6YEB1              	100.00%		E1C3P4              	100.00%
                    	       		F1NES6              	9.90%
Bootstrap support for F6YEB1 as seed ortholog is 100%.
Bootstrap support for E1C3P4 as seed ortholog is 100%.

Group of orthologs #414. Best score 819 bits
Score difference with first non-orthologous sequence - C.intestinalis:667 G.gallus:205

F6U062              	100.00%		E1BY40              	100.00%
                    	       		F1NW73              	19.28%
Bootstrap support for F6U062 as seed ortholog is 100%.
Bootstrap support for E1BY40 as seed ortholog is 99%.

Group of orthologs #415. Best score 816 bits
Score difference with first non-orthologous sequence - C.intestinalis:816 G.gallus:222

F7B6Z2              	100.00%		F1NHX1              	100.00%
                    	       		Q5F4A2              	31.83%
Bootstrap support for F7B6Z2 as seed ortholog is 100%.
Bootstrap support for F1NHX1 as seed ortholog is 99%.

Group of orthologs #416. Best score 816 bits
Score difference with first non-orthologous sequence - C.intestinalis:816 G.gallus:816

F6Q0W6              	100.00%		F1NYD7              	100.00%
Bootstrap support for F6Q0W6 as seed ortholog is 100%.
Bootstrap support for F1NYD7 as seed ortholog is 100%.

Group of orthologs #417. Best score 815 bits
Score difference with first non-orthologous sequence - C.intestinalis:815 G.gallus:815

F6VBU5              	100.00%		E1C6G6              	100.00%
Bootstrap support for F6VBU5 as seed ortholog is 100%.
Bootstrap support for E1C6G6 as seed ortholog is 100%.

Group of orthologs #418. Best score 814 bits
Score difference with first non-orthologous sequence - C.intestinalis:814 G.gallus:814

F6Q2U2              	100.00%		F1NID0              	100.00%
Bootstrap support for F6Q2U2 as seed ortholog is 100%.
Bootstrap support for F1NID0 as seed ortholog is 100%.

Group of orthologs #419. Best score 813 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 G.gallus:70

H2Y3G9              	100.00%		F1NN74              	100.00%
                    	       		F1P0I9              	15.44%
Bootstrap support for H2Y3G9 as seed ortholog is 99%.
Bootstrap support for F1NN74 as seed ortholog is 86%.

Group of orthologs #420. Best score 813 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 G.gallus:603

F7BEF3              	100.00%		Q5F424              	100.00%
Bootstrap support for F7BEF3 as seed ortholog is 100%.
Bootstrap support for Q5F424 as seed ortholog is 100%.

Group of orthologs #421. Best score 812 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 G.gallus:399

F6SLT5              	100.00%		E1BXD9              	100.00%
Bootstrap support for F6SLT5 as seed ortholog is 100%.
Bootstrap support for E1BXD9 as seed ortholog is 100%.

Group of orthologs #422. Best score 810 bits
Score difference with first non-orthologous sequence - C.intestinalis:810 G.gallus:547

H2XSZ6              	100.00%		F1NP45              	100.00%
                    	       		E1C607              	47.99%
Bootstrap support for H2XSZ6 as seed ortholog is 100%.
Bootstrap support for F1NP45 as seed ortholog is 100%.

Group of orthologs #423. Best score 810 bits
Score difference with first non-orthologous sequence - C.intestinalis:810 G.gallus:810

H2XZM7              	100.00%		F1NB09              	100.00%
Bootstrap support for H2XZM7 as seed ortholog is 100%.
Bootstrap support for F1NB09 as seed ortholog is 100%.

Group of orthologs #424. Best score 809 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 G.gallus:215

F7A0G1              	100.00%		F1P354              	100.00%
                    	       		F1NDD2              	48.88%
Bootstrap support for F7A0G1 as seed ortholog is 100%.
Bootstrap support for F1P354 as seed ortholog is 99%.

Group of orthologs #425. Best score 809 bits
Score difference with first non-orthologous sequence - C.intestinalis:809 G.gallus:809

F7A3E4              	100.00%		F1NEH1              	100.00%
Bootstrap support for F7A3E4 as seed ortholog is 100%.
Bootstrap support for F1NEH1 as seed ortholog is 100%.

Group of orthologs #426. Best score 808 bits
Score difference with first non-orthologous sequence - C.intestinalis:808 G.gallus:808

F6WAZ5              	100.00%		F1NAJ2              	100.00%
Bootstrap support for F6WAZ5 as seed ortholog is 100%.
Bootstrap support for F1NAJ2 as seed ortholog is 100%.

Group of orthologs #427. Best score 807 bits
Score difference with first non-orthologous sequence - C.intestinalis:807 G.gallus:807

F6RKU1              	100.00%		F1P5J7              	100.00%
Bootstrap support for F6RKU1 as seed ortholog is 100%.
Bootstrap support for F1P5J7 as seed ortholog is 100%.

Group of orthologs #428. Best score 807 bits
Score difference with first non-orthologous sequence - C.intestinalis:662 G.gallus:37

F6Z8I3              	100.00%		Q9W7I5              	100.00%
Bootstrap support for F6Z8I3 as seed ortholog is 100%.
Bootstrap support for Q9W7I5 as seed ortholog is 89%.

Group of orthologs #429. Best score 805 bits
Score difference with first non-orthologous sequence - C.intestinalis:805 G.gallus:805

F7B6E8              	100.00%		Q5XKY5              	100.00%
                    	       		P31335              	98.90%
Bootstrap support for F7B6E8 as seed ortholog is 100%.
Bootstrap support for Q5XKY5 as seed ortholog is 100%.

Group of orthologs #430. Best score 805 bits
Score difference with first non-orthologous sequence - C.intestinalis:805 G.gallus:805

F6VQX3              	100.00%		F1NF87              	100.00%
Bootstrap support for F6VQX3 as seed ortholog is 100%.
Bootstrap support for F1NF87 as seed ortholog is 100%.

Group of orthologs #431. Best score 805 bits
Score difference with first non-orthologous sequence - C.intestinalis:805 G.gallus:805

F6ZAD3              	100.00%		F1NGI4              	100.00%
Bootstrap support for F6ZAD3 as seed ortholog is 100%.
Bootstrap support for F1NGI4 as seed ortholog is 100%.

Group of orthologs #432. Best score 804 bits
Score difference with first non-orthologous sequence - C.intestinalis:804 G.gallus:804

F6R901              	100.00%		F1NXB9              	100.00%
Bootstrap support for F6R901 as seed ortholog is 100%.
Bootstrap support for F1NXB9 as seed ortholog is 100%.

Group of orthologs #433. Best score 803 bits
Score difference with first non-orthologous sequence - C.intestinalis:705 G.gallus:722

F6QXC2              	100.00%		E1BV27              	100.00%
                    	       		F1NYZ8              	59.93%
Bootstrap support for F6QXC2 as seed ortholog is 100%.
Bootstrap support for E1BV27 as seed ortholog is 100%.

Group of orthologs #434. Best score 803 bits
Score difference with first non-orthologous sequence - C.intestinalis:803 G.gallus:422

F6Z2U1              	100.00%		F1P1M8              	100.00%
                    	       		Q90640              	99.11%
Bootstrap support for F6Z2U1 as seed ortholog is 100%.
Bootstrap support for F1P1M8 as seed ortholog is 100%.

Group of orthologs #435. Best score 803 bits
Score difference with first non-orthologous sequence - C.intestinalis:803 G.gallus:659

F6WV80              	100.00%		E1BQV7              	100.00%
Bootstrap support for F6WV80 as seed ortholog is 100%.
Bootstrap support for E1BQV7 as seed ortholog is 100%.

Group of orthologs #436. Best score 802 bits
Score difference with first non-orthologous sequence - C.intestinalis:802 G.gallus:337

F6TKV3              	100.00%		F1NQC6              	100.00%
Bootstrap support for F6TKV3 as seed ortholog is 100%.
Bootstrap support for F1NQC6 as seed ortholog is 100%.

Group of orthologs #437. Best score 802 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 G.gallus:802

H2Y0Q1              	100.00%		E1C303              	100.00%
Bootstrap support for H2Y0Q1 as seed ortholog is 99%.
Bootstrap support for E1C303 as seed ortholog is 100%.

Group of orthologs #438. Best score 802 bits
Score difference with first non-orthologous sequence - C.intestinalis:802 G.gallus:802

F6Z3I0              	100.00%		F1P2D3              	100.00%
Bootstrap support for F6Z3I0 as seed ortholog is 100%.
Bootstrap support for F1P2D3 as seed ortholog is 100%.

Group of orthologs #439. Best score 801 bits
Score difference with first non-orthologous sequence - C.intestinalis:801 G.gallus:801

F6ZM86              	100.00%		F1P4K3              	100.00%
                    	       		F1NBN1              	58.67%
Bootstrap support for F6ZM86 as seed ortholog is 100%.
Bootstrap support for F1P4K3 as seed ortholog is 100%.

Group of orthologs #440. Best score 800 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 G.gallus:359

H2XLZ9              	100.00%		F1P3M5              	100.00%
                    	       		F1P521              	18.26%
Bootstrap support for H2XLZ9 as seed ortholog is 100%.
Bootstrap support for F1P3M5 as seed ortholog is 100%.

Group of orthologs #441. Best score 799 bits
Score difference with first non-orthologous sequence - C.intestinalis:799 G.gallus:799

H2XUH7              	100.00%		F1P4F7              	100.00%
                    	       		F1NS44              	5.75%
Bootstrap support for H2XUH7 as seed ortholog is 100%.
Bootstrap support for F1P4F7 as seed ortholog is 100%.

Group of orthologs #442. Best score 799 bits
Score difference with first non-orthologous sequence - C.intestinalis:799 G.gallus:402

F6PXA9              	100.00%		F1NYH9              	100.00%
Bootstrap support for F6PXA9 as seed ortholog is 100%.
Bootstrap support for F1NYH9 as seed ortholog is 100%.

Group of orthologs #443. Best score 798 bits
Score difference with first non-orthologous sequence - C.intestinalis:798 G.gallus:798

Q1RL50              	100.00%		F1NKX8              	100.00%
                    	       		E1BTH6              	20.97%
Bootstrap support for Q1RL50 as seed ortholog is 100%.
Bootstrap support for F1NKX8 as seed ortholog is 100%.

Group of orthologs #444. Best score 798 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 G.gallus:395

F6XRF6              	100.00%		Q5ZLD3              	100.00%
Bootstrap support for F6XRF6 as seed ortholog is 100%.
Bootstrap support for Q5ZLD3 as seed ortholog is 100%.

Group of orthologs #445. Best score 797 bits
Score difference with first non-orthologous sequence - C.intestinalis:797 G.gallus:797

F6YHN3              	100.00%		E1BXI4              	100.00%
Bootstrap support for F6YHN3 as seed ortholog is 100%.
Bootstrap support for E1BXI4 as seed ortholog is 100%.

Group of orthologs #446. Best score 797 bits
Score difference with first non-orthologous sequence - C.intestinalis:797 G.gallus:797

F7APZ8              	100.00%		E1BXK3              	100.00%
Bootstrap support for F7APZ8 as seed ortholog is 100%.
Bootstrap support for E1BXK3 as seed ortholog is 100%.

Group of orthologs #447. Best score 796 bits
Score difference with first non-orthologous sequence - C.intestinalis:796 G.gallus:796

F7ASK1              	100.00%		E1BQP9              	100.00%
Bootstrap support for F7ASK1 as seed ortholog is 100%.
Bootstrap support for E1BQP9 as seed ortholog is 100%.

Group of orthologs #448. Best score 795 bits
Score difference with first non-orthologous sequence - C.intestinalis:795 G.gallus:795

F6WD89              	100.00%		E1C492              	100.00%
Q4H3F0              	7.34%		F1N9Y3              	63.80%
                    	       		F1NFV1              	16.56%
Bootstrap support for F6WD89 as seed ortholog is 100%.
Bootstrap support for E1C492 as seed ortholog is 100%.

Group of orthologs #449. Best score 795 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 G.gallus:230

F6SVM8              	100.00%		Q98UI9              	100.00%
                    	       		E1C037              	13.38%
Bootstrap support for F6SVM8 as seed ortholog is 99%.
Bootstrap support for Q98UI9 as seed ortholog is 99%.

Group of orthologs #450. Best score 795 bits
Score difference with first non-orthologous sequence - C.intestinalis:795 G.gallus:728

F6WWW4              	100.00%		F1NM37              	100.00%
Bootstrap support for F6WWW4 as seed ortholog is 100%.
Bootstrap support for F1NM37 as seed ortholog is 100%.

Group of orthologs #451. Best score 795 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 G.gallus:685

F6TGH1              	100.00%		F1P0V5              	100.00%
Bootstrap support for F6TGH1 as seed ortholog is 100%.
Bootstrap support for F1P0V5 as seed ortholog is 100%.

Group of orthologs #452. Best score 794 bits
Score difference with first non-orthologous sequence - C.intestinalis:794 G.gallus:794

F6U2U3              	100.00%		F1NAQ8              	100.00%
Bootstrap support for F6U2U3 as seed ortholog is 100%.
Bootstrap support for F1NAQ8 as seed ortholog is 100%.

Group of orthologs #453. Best score 793 bits
Score difference with first non-orthologous sequence - C.intestinalis:793 G.gallus:793

F6UQ90              	100.00%		F1NBD1              	100.00%
Bootstrap support for F6UQ90 as seed ortholog is 100%.
Bootstrap support for F1NBD1 as seed ortholog is 100%.

Group of orthologs #454. Best score 793 bits
Score difference with first non-orthologous sequence - C.intestinalis:793 G.gallus:406

F7A8M5              	100.00%		F1NNM5              	100.00%
Bootstrap support for F7A8M5 as seed ortholog is 100%.
Bootstrap support for F1NNM5 as seed ortholog is 100%.

Group of orthologs #455. Best score 793 bits
Score difference with first non-orthologous sequence - C.intestinalis:740 G.gallus:793

F6YFY0              	100.00%		Q5ZMS3              	100.00%
Bootstrap support for F6YFY0 as seed ortholog is 100%.
Bootstrap support for Q5ZMS3 as seed ortholog is 100%.

Group of orthologs #456. Best score 792 bits
Score difference with first non-orthologous sequence - C.intestinalis:792 G.gallus:544

F6XKK7              	100.00%		F1P1H5              	100.00%
                    	       		F1NVK7              	40.84%
Bootstrap support for F6XKK7 as seed ortholog is 100%.
Bootstrap support for F1P1H5 as seed ortholog is 100%.

Group of orthologs #457. Best score 792 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 G.gallus:112

F6UR44              	100.00%		E1BYW4              	100.00%
Bootstrap support for F6UR44 as seed ortholog is 100%.
Bootstrap support for E1BYW4 as seed ortholog is 99%.

Group of orthologs #458. Best score 792 bits
Score difference with first non-orthologous sequence - C.intestinalis:792 G.gallus:792

F6U2V6              	100.00%		F1NDU6              	100.00%
Bootstrap support for F6U2V6 as seed ortholog is 100%.
Bootstrap support for F1NDU6 as seed ortholog is 100%.

Group of orthologs #459. Best score 792 bits
Score difference with first non-orthologous sequence - C.intestinalis:792 G.gallus:703

F6WTE3              	100.00%		Q5ZL72              	100.00%
Bootstrap support for F6WTE3 as seed ortholog is 100%.
Bootstrap support for Q5ZL72 as seed ortholog is 100%.

Group of orthologs #460. Best score 792 bits
Score difference with first non-orthologous sequence - C.intestinalis:509 G.gallus:545

Q1RPW7              	100.00%		F1NAH6              	100.00%
Bootstrap support for Q1RPW7 as seed ortholog is 100%.
Bootstrap support for F1NAH6 as seed ortholog is 100%.

Group of orthologs #461. Best score 791 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 G.gallus:29

F6SWW8              	100.00%		F1NNK3              	100.00%
F6YSD1              	12.07%		
Bootstrap support for F6SWW8 as seed ortholog is 99%.
Bootstrap support for F1NNK3 as seed ortholog is 74%.
Alternative seed ortholog is F1NZW3 (29 bits away from this cluster)

Group of orthologs #462. Best score 791 bits
Score difference with first non-orthologous sequence - C.intestinalis:583 G.gallus:571

F6RHK8              	100.00%		E1C155              	100.00%
Bootstrap support for F6RHK8 as seed ortholog is 100%.
Bootstrap support for E1C155 as seed ortholog is 100%.

Group of orthologs #463. Best score 790 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 G.gallus:585

F6PZ06              	100.00%		F1NFL8              	100.00%
Bootstrap support for F6PZ06 as seed ortholog is 100%.
Bootstrap support for F1NFL8 as seed ortholog is 100%.

Group of orthologs #464. Best score 789 bits
Score difference with first non-orthologous sequence - C.intestinalis:789 G.gallus:126

F6YCG7              	100.00%		E1BTI9              	100.00%
Bootstrap support for F6YCG7 as seed ortholog is 100%.
Bootstrap support for E1BTI9 as seed ortholog is 97%.

Group of orthologs #465. Best score 789 bits
Score difference with first non-orthologous sequence - C.intestinalis:789 G.gallus:789

F6U8C7              	100.00%		F1NZ25              	100.00%
Bootstrap support for F6U8C7 as seed ortholog is 100%.
Bootstrap support for F1NZ25 as seed ortholog is 100%.

Group of orthologs #466. Best score 788 bits
Score difference with first non-orthologous sequence - C.intestinalis:788 G.gallus:644

F6Z7W1              	100.00%		F1N9F3              	100.00%
                    	       		E1BSC6              	21.73%
Bootstrap support for F6Z7W1 as seed ortholog is 100%.
Bootstrap support for F1N9F3 as seed ortholog is 100%.

Group of orthologs #467. Best score 788 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 G.gallus:332

F6WPG2              	100.00%		F1NUG0              	100.00%
Bootstrap support for F6WPG2 as seed ortholog is 100%.
Bootstrap support for F1NUG0 as seed ortholog is 100%.

Group of orthologs #468. Best score 788 bits
Score difference with first non-orthologous sequence - C.intestinalis:788 G.gallus:788

F7ABS5              	100.00%		F1NVF6              	100.00%
Bootstrap support for F7ABS5 as seed ortholog is 100%.
Bootstrap support for F1NVF6 as seed ortholog is 100%.

Group of orthologs #469. Best score 788 bits
Score difference with first non-orthologous sequence - C.intestinalis:727 G.gallus:665

F6W0C3              	100.00%		Q5ZLG0              	100.00%
Bootstrap support for F6W0C3 as seed ortholog is 100%.
Bootstrap support for Q5ZLG0 as seed ortholog is 100%.

Group of orthologs #470. Best score 787 bits
Score difference with first non-orthologous sequence - C.intestinalis:787 G.gallus:787

F6Q427              	100.00%		F1NI26              	100.00%
Bootstrap support for F6Q427 as seed ortholog is 100%.
Bootstrap support for F1NI26 as seed ortholog is 100%.

Group of orthologs #471. Best score 787 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 G.gallus:601

H2XS20              	100.00%		F1NEQ3              	100.00%
Bootstrap support for H2XS20 as seed ortholog is 100%.
Bootstrap support for F1NEQ3 as seed ortholog is 100%.

Group of orthologs #472. Best score 787 bits
Score difference with first non-orthologous sequence - C.intestinalis:787 G.gallus:423

F7B593              	100.00%		Q5ZLT0              	100.00%
Bootstrap support for F7B593 as seed ortholog is 100%.
Bootstrap support for Q5ZLT0 as seed ortholog is 100%.

Group of orthologs #473. Best score 785 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 G.gallus:383

F6YUE7              	100.00%		E1C4U5              	100.00%
Bootstrap support for F6YUE7 as seed ortholog is 100%.
Bootstrap support for E1C4U5 as seed ortholog is 100%.

Group of orthologs #474. Best score 783 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 G.gallus:638

F6UTP0              	100.00%		F1NS73              	100.00%
Bootstrap support for F6UTP0 as seed ortholog is 100%.
Bootstrap support for F1NS73 as seed ortholog is 100%.

Group of orthologs #475. Best score 782 bits
Score difference with first non-orthologous sequence - C.intestinalis:782 G.gallus:574

F6SBC7              	100.00%		F1P2U1              	100.00%
                    	       		E1BQK9              	71.10%
Bootstrap support for F6SBC7 as seed ortholog is 100%.
Bootstrap support for F1P2U1 as seed ortholog is 100%.

Group of orthologs #476. Best score 781 bits
Score difference with first non-orthologous sequence - C.intestinalis:781 G.gallus:185

F6SZE1              	100.00%		F1NXD7              	100.00%
Bootstrap support for F6SZE1 as seed ortholog is 100%.
Bootstrap support for F1NXD7 as seed ortholog is 99%.

Group of orthologs #477. Best score 781 bits
Score difference with first non-orthologous sequence - C.intestinalis:781 G.gallus:781

H2XR85              	100.00%		E1C1R4              	100.00%
Bootstrap support for H2XR85 as seed ortholog is 100%.
Bootstrap support for E1C1R4 as seed ortholog is 100%.

Group of orthologs #478. Best score 779 bits
Score difference with first non-orthologous sequence - C.intestinalis:779 G.gallus:453

F6YGI4              	100.00%		E1BWF6              	100.00%
Bootstrap support for F6YGI4 as seed ortholog is 100%.
Bootstrap support for E1BWF6 as seed ortholog is 100%.

Group of orthologs #479. Best score 779 bits
Score difference with first non-orthologous sequence - C.intestinalis:779 G.gallus:779

H2XRC8              	100.00%		E1C2S0              	100.00%
Bootstrap support for H2XRC8 as seed ortholog is 100%.
Bootstrap support for E1C2S0 as seed ortholog is 100%.

Group of orthologs #480. Best score 779 bits
Score difference with first non-orthologous sequence - C.intestinalis:779 G.gallus:779

H2Y1I7              	100.00%		E1C2W1              	100.00%
Bootstrap support for H2Y1I7 as seed ortholog is 100%.
Bootstrap support for E1C2W1 as seed ortholog is 100%.

Group of orthologs #481. Best score 778 bits
Score difference with first non-orthologous sequence - C.intestinalis:778 G.gallus:778

F6QJ41              	100.00%		E1BQI6              	100.00%
Bootstrap support for F6QJ41 as seed ortholog is 100%.
Bootstrap support for E1BQI6 as seed ortholog is 100%.

Group of orthologs #482. Best score 778 bits
Score difference with first non-orthologous sequence - C.intestinalis:778 G.gallus:778

F6TP68              	100.00%		F1NB85              	100.00%
Bootstrap support for F6TP68 as seed ortholog is 100%.
Bootstrap support for F1NB85 as seed ortholog is 100%.

Group of orthologs #483. Best score 777 bits
Score difference with first non-orthologous sequence - C.intestinalis:777 G.gallus:777

F7B5P4              	100.00%		F1NVR6              	100.00%
                    	       		F1NXG1              	51.74%
Bootstrap support for F7B5P4 as seed ortholog is 100%.
Bootstrap support for F1NVR6 as seed ortholog is 100%.

Group of orthologs #484. Best score 777 bits
Score difference with first non-orthologous sequence - C.intestinalis:777 G.gallus:777

H2XUM1              	100.00%		E1C9D7              	100.00%
Bootstrap support for H2XUM1 as seed ortholog is 100%.
Bootstrap support for E1C9D7 as seed ortholog is 100%.

Group of orthologs #485. Best score 776 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 G.gallus:776

H2XSX9              	100.00%		Q90835              	100.00%
                    	       		F1N9H4              	62.18%
Bootstrap support for H2XSX9 as seed ortholog is 78%.
Bootstrap support for Q90835 as seed ortholog is 100%.

Group of orthologs #486. Best score 776 bits
Score difference with first non-orthologous sequence - C.intestinalis:776 G.gallus:776

F6WNR2              	100.00%		E1BYQ9              	100.00%
Bootstrap support for F6WNR2 as seed ortholog is 100%.
Bootstrap support for E1BYQ9 as seed ortholog is 100%.

Group of orthologs #487. Best score 776 bits
Score difference with first non-orthologous sequence - C.intestinalis:687 G.gallus:727

F6W8G0              	100.00%		F1NQ45              	100.00%
Bootstrap support for F6W8G0 as seed ortholog is 100%.
Bootstrap support for F1NQ45 as seed ortholog is 100%.

Group of orthologs #488. Best score 775 bits
Score difference with first non-orthologous sequence - C.intestinalis:775 G.gallus:229

H2Y2A4              	100.00%		E1C928              	100.00%
                    	       		F1NWD6              	11.37%
Bootstrap support for H2Y2A4 as seed ortholog is 100%.
Bootstrap support for E1C928 as seed ortholog is 100%.

Group of orthologs #489. Best score 774 bits
Score difference with first non-orthologous sequence - C.intestinalis:774 G.gallus:774

F6ZCC7              	100.00%		E1BQW6              	100.00%
Bootstrap support for F6ZCC7 as seed ortholog is 100%.
Bootstrap support for E1BQW6 as seed ortholog is 100%.

Group of orthologs #490. Best score 773 bits
Score difference with first non-orthologous sequence - C.intestinalis:773 G.gallus:773

F6VRS6              	100.00%		F1NJY2              	100.00%
Bootstrap support for F6VRS6 as seed ortholog is 100%.
Bootstrap support for F1NJY2 as seed ortholog is 100%.

Group of orthologs #491. Best score 773 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 G.gallus:773

F6WAT8              	100.00%		F1NWS5              	100.00%
Bootstrap support for F6WAT8 as seed ortholog is 100%.
Bootstrap support for F1NWS5 as seed ortholog is 100%.

Group of orthologs #492. Best score 772 bits
Score difference with first non-orthologous sequence - C.intestinalis:772 G.gallus:772

F7BMY3              	100.00%		A0M8U1              	100.00%
                    	       		Q90YH8              	18.23%
Bootstrap support for F7BMY3 as seed ortholog is 100%.
Bootstrap support for A0M8U1 as seed ortholog is 100%.

Group of orthologs #493. Best score 772 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 G.gallus:502

F6WMK2              	100.00%		I0IUP3              	100.00%
Bootstrap support for F6WMK2 as seed ortholog is 100%.
Bootstrap support for I0IUP3 as seed ortholog is 100%.

Group of orthologs #494. Best score 771 bits
Score difference with first non-orthologous sequence - C.intestinalis:771 G.gallus:771

F6TSV6              	100.00%		Q5F3K4              	100.00%
Bootstrap support for F6TSV6 as seed ortholog is 100%.
Bootstrap support for Q5F3K4 as seed ortholog is 100%.

Group of orthologs #495. Best score 770 bits
Score difference with first non-orthologous sequence - C.intestinalis:770 G.gallus:770

F6PQ94              	100.00%		E1BUJ0              	100.00%
Bootstrap support for F6PQ94 as seed ortholog is 100%.
Bootstrap support for E1BUJ0 as seed ortholog is 100%.

Group of orthologs #496. Best score 770 bits
Score difference with first non-orthologous sequence - C.intestinalis:770 G.gallus:770

F6VG31              	100.00%		F1NZW1              	100.00%
Bootstrap support for F6VG31 as seed ortholog is 100%.
Bootstrap support for F1NZW1 as seed ortholog is 100%.

Group of orthologs #497. Best score 770 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 G.gallus:377

H2Y2J7              	100.00%		F1NB86              	100.00%
Bootstrap support for H2Y2J7 as seed ortholog is 100%.
Bootstrap support for F1NB86 as seed ortholog is 99%.

Group of orthologs #498. Best score 769 bits
Score difference with first non-orthologous sequence - C.intestinalis:769 G.gallus:720

F6WWD5              	100.00%		E1BRY8              	100.00%
Bootstrap support for F6WWD5 as seed ortholog is 100%.
Bootstrap support for E1BRY8 as seed ortholog is 100%.

Group of orthologs #499. Best score 769 bits
Score difference with first non-orthologous sequence - C.intestinalis:769 G.gallus:769

F6UET6              	100.00%		E1C8Q3              	100.00%
Bootstrap support for F6UET6 as seed ortholog is 100%.
Bootstrap support for E1C8Q3 as seed ortholog is 100%.

Group of orthologs #500. Best score 769 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 G.gallus:659

F7AXJ1              	100.00%		F1NIH9              	100.00%
Bootstrap support for F7AXJ1 as seed ortholog is 100%.
Bootstrap support for F1NIH9 as seed ortholog is 100%.

Group of orthologs #501. Best score 769 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:78

F6XQ30              	100.00%		F1P1E9              	100.00%
Bootstrap support for F6XQ30 as seed ortholog is 99%.
Bootstrap support for F1P1E9 as seed ortholog is 96%.

Group of orthologs #502. Best score 769 bits
Score difference with first non-orthologous sequence - C.intestinalis:769 G.gallus:769

F6UIE4              	100.00%		Q5ZMP6              	100.00%
Bootstrap support for F6UIE4 as seed ortholog is 100%.
Bootstrap support for Q5ZMP6 as seed ortholog is 100%.

Group of orthologs #503. Best score 767 bits
Score difference with first non-orthologous sequence - C.intestinalis:767 G.gallus:767

F6R3V0              	100.00%		E1C457              	100.00%
                    	       		F1NH66              	10.59%
Bootstrap support for F6R3V0 as seed ortholog is 100%.
Bootstrap support for E1C457 as seed ortholog is 100%.

Group of orthologs #504. Best score 767 bits
Score difference with first non-orthologous sequence - C.intestinalis:767 G.gallus:767

H2XRD5              	100.00%		H9KZU2              	100.00%
                    	       		F1NG56              	7.00%
Bootstrap support for H2XRD5 as seed ortholog is 100%.
Bootstrap support for H9KZU2 as seed ortholog is 100%.

Group of orthologs #505. Best score 767 bits
Score difference with first non-orthologous sequence - C.intestinalis:767 G.gallus:430

F6Y8H4              	100.00%		E1BZ74              	100.00%
Bootstrap support for F6Y8H4 as seed ortholog is 100%.
Bootstrap support for E1BZ74 as seed ortholog is 100%.

Group of orthologs #506. Best score 767 bits
Score difference with first non-orthologous sequence - C.intestinalis:678 G.gallus:679

F6TPR3              	100.00%		Q5ZLC5              	100.00%
Bootstrap support for F6TPR3 as seed ortholog is 100%.
Bootstrap support for Q5ZLC5 as seed ortholog is 100%.

Group of orthologs #507. Best score 767 bits
Score difference with first non-orthologous sequence - C.intestinalis:767 G.gallus:534

F6Z3S0              	100.00%		Q5ZM11              	100.00%
Bootstrap support for F6Z3S0 as seed ortholog is 100%.
Bootstrap support for Q5ZM11 as seed ortholog is 100%.

Group of orthologs #508. Best score 766 bits
Score difference with first non-orthologous sequence - C.intestinalis:766 G.gallus:766

H2XRH2              	100.00%		F1NAT2              	100.00%
Bootstrap support for H2XRH2 as seed ortholog is 100%.
Bootstrap support for F1NAT2 as seed ortholog is 100%.

Group of orthologs #509. Best score 766 bits
Score difference with first non-orthologous sequence - C.intestinalis:766 G.gallus:766

H2Y1G5              	100.00%		E1C656              	100.00%
Bootstrap support for H2Y1G5 as seed ortholog is 100%.
Bootstrap support for E1C656 as seed ortholog is 100%.

Group of orthologs #510. Best score 765 bits
Score difference with first non-orthologous sequence - C.intestinalis:765 G.gallus:765

F6SXW5              	100.00%		E1C268              	100.00%
Bootstrap support for F6SXW5 as seed ortholog is 100%.
Bootstrap support for E1C268 as seed ortholog is 100%.

Group of orthologs #511. Best score 765 bits
Score difference with first non-orthologous sequence - C.intestinalis:765 G.gallus:670

F6R107              	100.00%		F1NDF4              	100.00%
Bootstrap support for F6R107 as seed ortholog is 100%.
Bootstrap support for F1NDF4 as seed ortholog is 100%.

Group of orthologs #512. Best score 765 bits
Score difference with first non-orthologous sequence - C.intestinalis:765 G.gallus:555

H2Y2G2              	100.00%		P12003              	100.00%
Bootstrap support for H2Y2G2 as seed ortholog is 100%.
Bootstrap support for P12003 as seed ortholog is 100%.

Group of orthologs #513. Best score 764 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 G.gallus:561

F6XMA0              	100.00%		F1NPG8              	100.00%
Bootstrap support for F6XMA0 as seed ortholog is 100%.
Bootstrap support for F1NPG8 as seed ortholog is 100%.

Group of orthologs #514. Best score 762 bits
Score difference with first non-orthologous sequence - C.intestinalis:452 G.gallus:232

F6SF88              	100.00%		E1BY87              	100.00%
Bootstrap support for F6SF88 as seed ortholog is 100%.
Bootstrap support for E1BY87 as seed ortholog is 99%.

Group of orthologs #515. Best score 761 bits
Score difference with first non-orthologous sequence - C.intestinalis:761 G.gallus:761

F6TS15              	100.00%		E1BWU8              	100.00%
Bootstrap support for F6TS15 as seed ortholog is 100%.
Bootstrap support for E1BWU8 as seed ortholog is 100%.

Group of orthologs #516. Best score 761 bits
Score difference with first non-orthologous sequence - C.intestinalis:521 G.gallus:550

H2XQ03              	100.00%		Q5ZLK7              	100.00%
Bootstrap support for H2XQ03 as seed ortholog is 100%.
Bootstrap support for Q5ZLK7 as seed ortholog is 100%.

Group of orthologs #517. Best score 760 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 G.gallus:531

F6XSL1              	100.00%		E1C718              	100.00%
                    	       		F1NE89              	20.06%
Bootstrap support for F6XSL1 as seed ortholog is 100%.
Bootstrap support for E1C718 as seed ortholog is 100%.

Group of orthologs #518. Best score 760 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 G.gallus:760

F6R8X1              	100.00%		F1N8Z4              	100.00%
Bootstrap support for F6R8X1 as seed ortholog is 100%.
Bootstrap support for F1N8Z4 as seed ortholog is 100%.

Group of orthologs #519. Best score 760 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 G.gallus:760

F6PNW9              	100.00%		Q5ZHT1              	100.00%
Bootstrap support for F6PNW9 as seed ortholog is 97%.
Bootstrap support for Q5ZHT1 as seed ortholog is 100%.

Group of orthologs #520. Best score 760 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 G.gallus:358

F7AA31              	100.00%		F1NHH3              	100.00%
Bootstrap support for F7AA31 as seed ortholog is 100%.
Bootstrap support for F1NHH3 as seed ortholog is 100%.

Group of orthologs #521. Best score 760 bits
Score difference with first non-orthologous sequence - C.intestinalis:760 G.gallus:760

H2Y1C4              	100.00%		F1NQF5              	100.00%
Bootstrap support for H2Y1C4 as seed ortholog is 100%.
Bootstrap support for F1NQF5 as seed ortholog is 100%.

Group of orthologs #522. Best score 759 bits
Score difference with first non-orthologous sequence - C.intestinalis:759 G.gallus:759

H2XXU0              	100.00%		E1BZD8              	100.00%
                    	       		E1C0I2              	31.87%
Bootstrap support for H2XXU0 as seed ortholog is 100%.
Bootstrap support for E1BZD8 as seed ortholog is 100%.

Group of orthologs #523. Best score 759 bits
Score difference with first non-orthologous sequence - C.intestinalis:759 G.gallus:759

F6V4K8              	100.00%		E1BUU5              	100.00%
Bootstrap support for F6V4K8 as seed ortholog is 100%.
Bootstrap support for E1BUU5 as seed ortholog is 100%.

Group of orthologs #524. Best score 759 bits
Score difference with first non-orthologous sequence - C.intestinalis:759 G.gallus:759

F6RIY5              	100.00%		F1NTK9              	100.00%
Bootstrap support for F6RIY5 as seed ortholog is 100%.
Bootstrap support for F1NTK9 as seed ortholog is 100%.

Group of orthologs #525. Best score 759 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 G.gallus:759

F6VRU1              	100.00%		F1NI29              	100.00%
Bootstrap support for F6VRU1 as seed ortholog is 100%.
Bootstrap support for F1NI29 as seed ortholog is 100%.

Group of orthologs #526. Best score 759 bits
Score difference with first non-orthologous sequence - C.intestinalis:759 G.gallus:759

H2XLC7              	100.00%		F1NHU0              	100.00%
Bootstrap support for H2XLC7 as seed ortholog is 100%.
Bootstrap support for F1NHU0 as seed ortholog is 100%.

Group of orthologs #527. Best score 759 bits
Score difference with first non-orthologous sequence - C.intestinalis:759 G.gallus:168

F6V5U6              	100.00%		Q5F3Z1              	100.00%
Bootstrap support for F6V5U6 as seed ortholog is 100%.
Bootstrap support for Q5F3Z1 as seed ortholog is 100%.

Group of orthologs #528. Best score 757 bits
Score difference with first non-orthologous sequence - C.intestinalis:757 G.gallus:757

F6PST3              	100.00%		E1BTM1              	100.00%
Bootstrap support for F6PST3 as seed ortholog is 100%.
Bootstrap support for E1BTM1 as seed ortholog is 100%.

Group of orthologs #529. Best score 757 bits
Score difference with first non-orthologous sequence - C.intestinalis:672 G.gallus:757

F6SPK3              	100.00%		E1C1E1              	100.00%
Bootstrap support for F6SPK3 as seed ortholog is 100%.
Bootstrap support for E1C1E1 as seed ortholog is 100%.

Group of orthologs #530. Best score 757 bits
Score difference with first non-orthologous sequence - C.intestinalis:757 G.gallus:757

F6ZDB4              	100.00%		F1NR08              	100.00%
Bootstrap support for F6ZDB4 as seed ortholog is 100%.
Bootstrap support for F1NR08 as seed ortholog is 100%.

Group of orthologs #531. Best score 757 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 G.gallus:600

F6YTL6              	100.00%		Q90732              	100.00%
Bootstrap support for F6YTL6 as seed ortholog is 100%.
Bootstrap support for Q90732 as seed ortholog is 100%.

Group of orthologs #532. Best score 754 bits
Score difference with first non-orthologous sequence - C.intestinalis:754 G.gallus:233

F6R815              	100.00%		E1C296              	100.00%
Bootstrap support for F6R815 as seed ortholog is 100%.
Bootstrap support for E1C296 as seed ortholog is 99%.

Group of orthologs #533. Best score 754 bits
Score difference with first non-orthologous sequence - C.intestinalis:754 G.gallus:183

F6UUQ0              	100.00%		F1NSV5              	100.00%
Bootstrap support for F6UUQ0 as seed ortholog is 100%.
Bootstrap support for F1NSV5 as seed ortholog is 99%.

Group of orthologs #534. Best score 753 bits
Score difference with first non-orthologous sequence - C.intestinalis:753 G.gallus:753

F6YAM0              	100.00%		E1C8F9              	100.00%
Bootstrap support for F6YAM0 as seed ortholog is 100%.
Bootstrap support for E1C8F9 as seed ortholog is 100%.

Group of orthologs #535. Best score 752 bits
Score difference with first non-orthologous sequence - C.intestinalis:752 G.gallus:752

F6WKD5              	100.00%		E1BY42              	100.00%
Bootstrap support for F6WKD5 as seed ortholog is 100%.
Bootstrap support for E1BY42 as seed ortholog is 100%.

Group of orthologs #536. Best score 752 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 G.gallus:334

F7BBN7              	100.00%		E1BYA5              	100.00%
Bootstrap support for F7BBN7 as seed ortholog is 100%.
Bootstrap support for E1BYA5 as seed ortholog is 100%.

Group of orthologs #537. Best score 752 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 G.gallus:752

F6WXR3              	100.00%		Q6B842              	100.00%
Bootstrap support for F6WXR3 as seed ortholog is 100%.
Bootstrap support for Q6B842 as seed ortholog is 100%.

Group of orthologs #538. Best score 750 bits
Score difference with first non-orthologous sequence - C.intestinalis:554 G.gallus:577

F6ZC49              	100.00%		Q6EE31              	100.00%
Bootstrap support for F6ZC49 as seed ortholog is 100%.
Bootstrap support for Q6EE31 as seed ortholog is 100%.

Group of orthologs #539. Best score 749 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 G.gallus:749

F6YR02              	100.00%		F1NYK3              	100.00%
Bootstrap support for F6YR02 as seed ortholog is 100%.
Bootstrap support for F1NYK3 as seed ortholog is 100%.

Group of orthologs #540. Best score 749 bits
Score difference with first non-orthologous sequence - C.intestinalis:642 G.gallus:466

H2XYB0              	100.00%		F1P5S3              	100.00%
Bootstrap support for H2XYB0 as seed ortholog is 100%.
Bootstrap support for F1P5S3 as seed ortholog is 100%.

Group of orthologs #541. Best score 748 bits
Score difference with first non-orthologous sequence - C.intestinalis:748 G.gallus:748

F6YDI9              	100.00%		P56517              	100.00%
                    	       		P56519              	43.67%
Bootstrap support for F6YDI9 as seed ortholog is 100%.
Bootstrap support for P56517 as seed ortholog is 100%.

Group of orthologs #542. Best score 748 bits
Score difference with first non-orthologous sequence - C.intestinalis:748 G.gallus:748

H2Y3A3              	100.00%		E1BTL1              	100.00%
Bootstrap support for H2Y3A3 as seed ortholog is 100%.
Bootstrap support for E1BTL1 as seed ortholog is 100%.

Group of orthologs #543. Best score 747 bits
Score difference with first non-orthologous sequence - C.intestinalis:747 G.gallus:747

F7APM6              	100.00%		E1BXR9              	100.00%
                    	       		E1C3Y4              	36.30%
Bootstrap support for F7APM6 as seed ortholog is 100%.
Bootstrap support for E1BXR9 as seed ortholog is 100%.

Group of orthologs #544. Best score 747 bits
Score difference with first non-orthologous sequence - C.intestinalis:747 G.gallus:747

F6QQX7              	100.00%		F1P2W2              	100.00%
                    	       		E1BYK5              	38.87%
Bootstrap support for F6QQX7 as seed ortholog is 100%.
Bootstrap support for F1P2W2 as seed ortholog is 100%.

Group of orthologs #545. Best score 747 bits
Score difference with first non-orthologous sequence - C.intestinalis:747 G.gallus:747

F7AQD6              	100.00%		E1C5B0              	100.00%
Bootstrap support for F7AQD6 as seed ortholog is 100%.
Bootstrap support for E1C5B0 as seed ortholog is 100%.

Group of orthologs #546. Best score 746 bits
Score difference with first non-orthologous sequence - C.intestinalis:746 G.gallus:746

F6VDC4              	100.00%		E1BSH7              	100.00%
                    	       		F1NUF9              	35.43%
Bootstrap support for F6VDC4 as seed ortholog is 100%.
Bootstrap support for E1BSH7 as seed ortholog is 100%.

Group of orthologs #547. Best score 746 bits
Score difference with first non-orthologous sequence - C.intestinalis:746 G.gallus:746

F6X4B8              	100.00%		F1NCW5              	100.00%
                    	       		F1P3D8              	39.97%
Bootstrap support for F6X4B8 as seed ortholog is 100%.
Bootstrap support for F1NCW5 as seed ortholog is 100%.

Group of orthologs #548. Best score 746 bits
Score difference with first non-orthologous sequence - C.intestinalis:746 G.gallus:746

F6W790              	100.00%		E1BQJ4              	100.00%
Bootstrap support for F6W790 as seed ortholog is 100%.
Bootstrap support for E1BQJ4 as seed ortholog is 100%.

Group of orthologs #549. Best score 746 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 G.gallus:223

H2XTS9              	100.00%		F1NAL0              	100.00%
Bootstrap support for H2XTS9 as seed ortholog is 100%.
Bootstrap support for F1NAL0 as seed ortholog is 99%.

Group of orthologs #550. Best score 746 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:253

F6X9G8              	100.00%		O57579              	100.00%
Bootstrap support for F6X9G8 as seed ortholog is 99%.
Bootstrap support for O57579 as seed ortholog is 99%.

Group of orthologs #551. Best score 745 bits
Score difference with first non-orthologous sequence - C.intestinalis:745 G.gallus:745

F7AI93              	100.00%		F1NU16              	100.00%
Bootstrap support for F7AI93 as seed ortholog is 100%.
Bootstrap support for F1NU16 as seed ortholog is 100%.

Group of orthologs #552. Best score 745 bits
Score difference with first non-orthologous sequence - C.intestinalis:745 G.gallus:745

F6Z761              	100.00%		Q5ZLD1              	100.00%
Bootstrap support for F6Z761 as seed ortholog is 100%.
Bootstrap support for Q5ZLD1 as seed ortholog is 100%.

Group of orthologs #553. Best score 744 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 G.gallus:22

F6T8C7              	100.00%		P68139              	100.00%
L7N0T1              	20.00%		P68034              	76.19%
F6SDC9              	15.00%		P08023              	38.10%
                    	       		P63270              	19.05%
Bootstrap support for F6T8C7 as seed ortholog is 98%.
Bootstrap support for P68139 as seed ortholog is 92%.

Group of orthologs #554. Best score 744 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 G.gallus:38

A2SY09              	100.00%		P60706              	100.00%
                    	       		Q5ZMQ2              	68.75%
                    	       		P53478              	62.50%
Bootstrap support for A2SY09 as seed ortholog is 88%.
Bootstrap support for P60706 as seed ortholog is 98%.

Group of orthologs #555. Best score 743 bits
Score difference with first non-orthologous sequence - C.intestinalis:743 G.gallus:743

F6VCN7              	100.00%		F1P124              	100.00%
                    	       		F1NSS9              	25.33%
Bootstrap support for F6VCN7 as seed ortholog is 100%.
Bootstrap support for F1P124 as seed ortholog is 100%.

Group of orthologs #556. Best score 743 bits
Score difference with first non-orthologous sequence - C.intestinalis:743 G.gallus:743

F6WHS8              	100.00%		P79987              	100.00%
Bootstrap support for F6WHS8 as seed ortholog is 100%.
Bootstrap support for P79987 as seed ortholog is 100%.

Group of orthologs #557. Best score 742 bits
Score difference with first non-orthologous sequence - C.intestinalis:742 G.gallus:742

F6UF57              	100.00%		E1BQE0              	100.00%
Bootstrap support for F6UF57 as seed ortholog is 100%.
Bootstrap support for E1BQE0 as seed ortholog is 100%.

Group of orthologs #558. Best score 742 bits
Score difference with first non-orthologous sequence - C.intestinalis:742 G.gallus:105

F6U4V1              	100.00%		F1NPI6              	100.00%
Bootstrap support for F6U4V1 as seed ortholog is 100%.
Bootstrap support for F1NPI6 as seed ortholog is 96%.

Group of orthologs #559. Best score 741 bits
Score difference with first non-orthologous sequence - C.intestinalis:741 G.gallus:741

F6VYC6              	100.00%		Q5ZJ08              	100.00%
Bootstrap support for F6VYC6 as seed ortholog is 100%.
Bootstrap support for Q5ZJ08 as seed ortholog is 100%.

Group of orthologs #560. Best score 740 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 G.gallus:233

F7BJA7              	100.00%		Q5ZLF7              	100.00%
                    	       		F1NV68              	30.54%
Bootstrap support for F7BJA7 as seed ortholog is 100%.
Bootstrap support for Q5ZLF7 as seed ortholog is 100%.

Group of orthologs #561. Best score 740 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 G.gallus:495

Q4H2R0              	100.00%		F1P2T7              	100.00%
Bootstrap support for Q4H2R0 as seed ortholog is 100%.
Bootstrap support for F1P2T7 as seed ortholog is 100%.

Group of orthologs #562. Best score 739 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:20

H2XSE7              	100.00%		E1BT93              	100.00%
Bootstrap support for H2XSE7 as seed ortholog is 99%.
Bootstrap support for E1BT93 as seed ortholog is 69%.
Alternative seed ortholog is P27463 (20 bits away from this cluster)

Group of orthologs #563. Best score 739 bits
Score difference with first non-orthologous sequence - C.intestinalis:739 G.gallus:739

F7AYX3              	100.00%		F1NC46              	100.00%
Bootstrap support for F7AYX3 as seed ortholog is 100%.
Bootstrap support for F1NC46 as seed ortholog is 100%.

Group of orthologs #564. Best score 738 bits
Score difference with first non-orthologous sequence - C.intestinalis:738 G.gallus:738

Q8HIM9              	100.00%		H9L3V8              	100.00%
                    	       		P18943              	100.00%
Bootstrap support for Q8HIM9 as seed ortholog is 100%.
Bootstrap support for H9L3V8 as seed ortholog is 100%.
Bootstrap support for P18943 as seed ortholog is 100%.

Group of orthologs #565. Best score 738 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 G.gallus:477

F6WI66              	100.00%		F1NIX1              	100.00%
Bootstrap support for F6WI66 as seed ortholog is 100%.
Bootstrap support for F1NIX1 as seed ortholog is 100%.

Group of orthologs #566. Best score 738 bits
Score difference with first non-orthologous sequence - C.intestinalis:738 G.gallus:738

F6SUC2              	100.00%		Q5ZL98              	100.00%
Bootstrap support for F6SUC2 as seed ortholog is 100%.
Bootstrap support for Q5ZL98 as seed ortholog is 100%.

Group of orthologs #567. Best score 737 bits
Score difference with first non-orthologous sequence - C.intestinalis:737 G.gallus:574

F6T4Y7              	100.00%		F1NMX9              	100.00%
                    	       		F1P1L1              	35.56%
Bootstrap support for F6T4Y7 as seed ortholog is 100%.
Bootstrap support for F1NMX9 as seed ortholog is 100%.

Group of orthologs #568. Best score 737 bits
Score difference with first non-orthologous sequence - C.intestinalis:737 G.gallus:737

H2XW04              	100.00%		F1NR24              	100.00%
Bootstrap support for H2XW04 as seed ortholog is 100%.
Bootstrap support for F1NR24 as seed ortholog is 100%.

Group of orthologs #569. Best score 736 bits
Score difference with first non-orthologous sequence - C.intestinalis:736 G.gallus:160

Q1RLE7              	100.00%		E1BX45              	100.00%
                    	       		F1P3T6              	21.16%
Bootstrap support for Q1RLE7 as seed ortholog is 100%.
Bootstrap support for E1BX45 as seed ortholog is 99%.

Group of orthologs #570. Best score 735 bits
Score difference with first non-orthologous sequence - C.intestinalis:735 G.gallus:735

F6TG24              	100.00%		P24802              	100.00%
                    	       		F1NXA9              	25.00%
Bootstrap support for F6TG24 as seed ortholog is 100%.
Bootstrap support for P24802 as seed ortholog is 100%.

Group of orthologs #571. Best score 735 bits
Score difference with first non-orthologous sequence - C.intestinalis:735 G.gallus:131

F6WWM2              	100.00%		F1P3J9              	100.00%
                    	       		Q5YCC7              	100.00%
Bootstrap support for F6WWM2 as seed ortholog is 100%.
Bootstrap support for F1P3J9 as seed ortholog is 99%.
Bootstrap support for Q5YCC7 as seed ortholog is 99%.

Group of orthologs #572. Best score 735 bits
Score difference with first non-orthologous sequence - C.intestinalis:735 G.gallus:735

F6UXH9              	100.00%		F1NEI9              	100.00%
Bootstrap support for F6UXH9 as seed ortholog is 100%.
Bootstrap support for F1NEI9 as seed ortholog is 100%.

Group of orthologs #573. Best score 735 bits
Score difference with first non-orthologous sequence - C.intestinalis:735 G.gallus:735

F6SM85              	100.00%		H9L0A9              	100.00%
Bootstrap support for F6SM85 as seed ortholog is 100%.
Bootstrap support for H9L0A9 as seed ortholog is 100%.

Group of orthologs #574. Best score 734 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:172

F6TKP0              	100.00%		F1NN54              	100.00%
F7B882              	64.36%		
F6TPL8              	50.00%		
Bootstrap support for F6TKP0 as seed ortholog is 99%.
Bootstrap support for F1NN54 as seed ortholog is 99%.

Group of orthologs #575. Best score 734 bits
Score difference with first non-orthologous sequence - C.intestinalis:734 G.gallus:734

F6ZM08              	100.00%		E1BWT7              	100.00%
Bootstrap support for F6ZM08 as seed ortholog is 100%.
Bootstrap support for E1BWT7 as seed ortholog is 100%.

Group of orthologs #576. Best score 733 bits
Score difference with first non-orthologous sequence - C.intestinalis:639 G.gallus:480

F7AV37              	100.00%		Q90688              	100.00%
                    	       		P16419              	28.85%
                    	       		E1C5Z5              	26.67%
Bootstrap support for F7AV37 as seed ortholog is 100%.
Bootstrap support for Q90688 as seed ortholog is 100%.

Group of orthologs #577. Best score 733 bits
Score difference with first non-orthologous sequence - C.intestinalis:733 G.gallus:733

Q4H2R2              	100.00%		Q04678              	100.00%
F6VQ10              	71.62%		
Bootstrap support for Q4H2R2 as seed ortholog is 100%.
Bootstrap support for Q04678 as seed ortholog is 100%.

Group of orthologs #578. Best score 733 bits
Score difference with first non-orthologous sequence - C.intestinalis:733 G.gallus:430

F6XVY9              	100.00%		F1NER6              	100.00%
Bootstrap support for F6XVY9 as seed ortholog is 100%.
Bootstrap support for F1NER6 as seed ortholog is 100%.

Group of orthologs #579. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 G.gallus:732

F7A961              	100.00%		E1BWG8              	100.00%
Bootstrap support for F7A961 as seed ortholog is 100%.
Bootstrap support for E1BWG8 as seed ortholog is 100%.

Group of orthologs #580. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:732 G.gallus:732

F6SWH7              	100.00%		F1NMR8              	100.00%
Bootstrap support for F6SWH7 as seed ortholog is 100%.
Bootstrap support for F1NMR8 as seed ortholog is 100%.

Group of orthologs #581. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:610 G.gallus:592

F6YDF4              	100.00%		E1C8Z8              	100.00%
Bootstrap support for F6YDF4 as seed ortholog is 100%.
Bootstrap support for E1C8Z8 as seed ortholog is 100%.

Group of orthologs #582. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 G.gallus:346

F6YD09              	100.00%		F1P0M1              	100.00%
Bootstrap support for F6YD09 as seed ortholog is 100%.
Bootstrap support for F1P0M1 as seed ortholog is 100%.

Group of orthologs #583. Best score 730 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 G.gallus:730

F6X7X8              	100.00%		F1NBR4              	100.00%
Bootstrap support for F6X7X8 as seed ortholog is 100%.
Bootstrap support for F1NBR4 as seed ortholog is 100%.

Group of orthologs #584. Best score 730 bits
Score difference with first non-orthologous sequence - C.intestinalis:730 G.gallus:730

F6YQS6              	100.00%		F1NG97              	100.00%
Bootstrap support for F6YQS6 as seed ortholog is 100%.
Bootstrap support for F1NG97 as seed ortholog is 100%.

Group of orthologs #585. Best score 730 bits
Score difference with first non-orthologous sequence - C.intestinalis:730 G.gallus:730

F6UDJ0              	100.00%		F1P3T9              	100.00%
Bootstrap support for F6UDJ0 as seed ortholog is 100%.
Bootstrap support for F1P3T9 as seed ortholog is 100%.

Group of orthologs #586. Best score 730 bits
Score difference with first non-orthologous sequence - C.intestinalis:730 G.gallus:159

F6ZDC7              	100.00%		F1NN63              	100.00%
Bootstrap support for F6ZDC7 as seed ortholog is 100%.
Bootstrap support for F1NN63 as seed ortholog is 99%.

Group of orthologs #587. Best score 730 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 G.gallus:264

O76808              	100.00%		F1NIJ8              	100.00%
Bootstrap support for O76808 as seed ortholog is 100%.
Bootstrap support for F1NIJ8 as seed ortholog is 100%.

Group of orthologs #588. Best score 728 bits
Score difference with first non-orthologous sequence - C.intestinalis:542 G.gallus:504

F6Z194              	100.00%		Q5ZHZ0              	100.00%
Bootstrap support for F6Z194 as seed ortholog is 100%.
Bootstrap support for Q5ZHZ0 as seed ortholog is 100%.

Group of orthologs #589. Best score 727 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 G.gallus:418

F7AHA3              	100.00%		P49147              	100.00%
Bootstrap support for F7AHA3 as seed ortholog is 100%.
Bootstrap support for P49147 as seed ortholog is 100%.

Group of orthologs #590. Best score 726 bits
Score difference with first non-orthologous sequence - C.intestinalis:590 G.gallus:558

F6XBC5              	100.00%		F1ND58              	100.00%
                    	       		E1C5I9              	8.71%
Bootstrap support for F6XBC5 as seed ortholog is 100%.
Bootstrap support for F1ND58 as seed ortholog is 100%.

Group of orthologs #591. Best score 726 bits
Score difference with first non-orthologous sequence - C.intestinalis:726 G.gallus:726

F6TT01              	100.00%		E1BRA6              	100.00%
Bootstrap support for F6TT01 as seed ortholog is 100%.
Bootstrap support for E1BRA6 as seed ortholog is 100%.

Group of orthologs #592. Best score 726 bits
Score difference with first non-orthologous sequence - C.intestinalis:726 G.gallus:726

F7A8S2              	100.00%		E1BXP3              	100.00%
Bootstrap support for F7A8S2 as seed ortholog is 100%.
Bootstrap support for E1BXP3 as seed ortholog is 100%.

Group of orthologs #593. Best score 726 bits
Score difference with first non-orthologous sequence - C.intestinalis:726 G.gallus:726

F7B0J8              	100.00%		F1NB77              	100.00%
Bootstrap support for F7B0J8 as seed ortholog is 100%.
Bootstrap support for F1NB77 as seed ortholog is 100%.

Group of orthologs #594. Best score 725 bits
Score difference with first non-orthologous sequence - C.intestinalis:725 G.gallus:611

F7ARH4              	100.00%		F1P1P9              	100.00%
                    	       		F1NWV6              	11.07%
                    	       		F1NGT2              	8.99%
Bootstrap support for F7ARH4 as seed ortholog is 100%.
Bootstrap support for F1P1P9 as seed ortholog is 100%.

Group of orthologs #595. Best score 725 bits
Score difference with first non-orthologous sequence - C.intestinalis:725 G.gallus:725

F6WN54              	100.00%		E1BT09              	100.00%
Bootstrap support for F6WN54 as seed ortholog is 100%.
Bootstrap support for E1BT09 as seed ortholog is 100%.

Group of orthologs #596. Best score 725 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 G.gallus:533

F6XF93              	100.00%		Q5ZM36              	100.00%
Bootstrap support for F6XF93 as seed ortholog is 100%.
Bootstrap support for Q5ZM36 as seed ortholog is 100%.

Group of orthologs #597. Best score 724 bits
Score difference with first non-orthologous sequence - C.intestinalis:724 G.gallus:280

F6W8D0              	100.00%		E1C988              	100.00%
Bootstrap support for F6W8D0 as seed ortholog is 100%.
Bootstrap support for E1C988 as seed ortholog is 100%.

Group of orthologs #598. Best score 724 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 G.gallus:450

F6REB0              	100.00%		F1NRL8              	100.00%
Bootstrap support for F6REB0 as seed ortholog is 100%.
Bootstrap support for F1NRL8 as seed ortholog is 100%.

Group of orthologs #599. Best score 723 bits
Score difference with first non-orthologous sequence - C.intestinalis:723 G.gallus:553

F6WZA5              	100.00%		F1N8Q9              	100.00%
                    	       		F1NMA4              	100.00%
Bootstrap support for F6WZA5 as seed ortholog is 100%.
Bootstrap support for F1N8Q9 as seed ortholog is 100%.
Bootstrap support for F1NMA4 as seed ortholog is 100%.

Group of orthologs #600. Best score 723 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 G.gallus:392

F6R554              	100.00%		F1NPU9              	100.00%
Bootstrap support for F6R554 as seed ortholog is 99%.
Bootstrap support for F1NPU9 as seed ortholog is 100%.

Group of orthologs #601. Best score 722 bits
Score difference with first non-orthologous sequence - C.intestinalis:722 G.gallus:722

F6UW46              	100.00%		Q5ZLP4              	100.00%
                    	       		Q5ZIY5              	60.00%
                    	       		F1NS72              	34.36%
                    	       		E1C2X1              	27.69%
Bootstrap support for F6UW46 as seed ortholog is 100%.
Bootstrap support for Q5ZLP4 as seed ortholog is 100%.

Group of orthologs #602. Best score 722 bits
Score difference with first non-orthologous sequence - C.intestinalis:722 G.gallus:722

F6SNC6              	100.00%		F1NSH8              	100.00%
                    	       		F1NUT5              	55.25%
Bootstrap support for F6SNC6 as seed ortholog is 100%.
Bootstrap support for F1NSH8 as seed ortholog is 100%.

Group of orthologs #603. Best score 720 bits
Score difference with first non-orthologous sequence - C.intestinalis:720 G.gallus:452

F6X873              	100.00%		F1NZ94              	100.00%
                    	       		E1C8V3              	61.22%
                    	       		E1C0H6              	37.76%
Bootstrap support for F6X873 as seed ortholog is 100%.
Bootstrap support for F1NZ94 as seed ortholog is 100%.

Group of orthologs #604. Best score 720 bits
Score difference with first non-orthologous sequence - C.intestinalis:720 G.gallus:720

F6UI47              	100.00%		F1NW43              	100.00%
                    	       		P00548              	84.57%
Bootstrap support for F6UI47 as seed ortholog is 100%.
Bootstrap support for F1NW43 as seed ortholog is 100%.

Group of orthologs #605. Best score 720 bits
Score difference with first non-orthologous sequence - C.intestinalis:720 G.gallus:720

H2Y1W2              	100.00%		E1BVF6              	100.00%
                    	       		E1C039              	29.97%
Bootstrap support for H2Y1W2 as seed ortholog is 100%.
Bootstrap support for E1BVF6 as seed ortholog is 100%.

Group of orthologs #606. Best score 719 bits
Score difference with first non-orthologous sequence - C.intestinalis:719 G.gallus:719

F6TM52              	100.00%		F1NH45              	100.00%
Bootstrap support for F6TM52 as seed ortholog is 100%.
Bootstrap support for F1NH45 as seed ortholog is 100%.

Group of orthologs #607. Best score 718 bits
Score difference with first non-orthologous sequence - C.intestinalis:718 G.gallus:183

F6VP00              	100.00%		E1C093              	100.00%
Bootstrap support for F6VP00 as seed ortholog is 100%.
Bootstrap support for E1C093 as seed ortholog is 99%.

Group of orthologs #608. Best score 718 bits
Score difference with first non-orthologous sequence - C.intestinalis:718 G.gallus:718

F6Z7N3              	100.00%		E1BZ01              	100.00%
Bootstrap support for F6Z7N3 as seed ortholog is 100%.
Bootstrap support for E1BZ01 as seed ortholog is 100%.

Group of orthologs #609. Best score 718 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 G.gallus:432

H2XQX6              	100.00%		F1N9Y0              	100.00%
Bootstrap support for H2XQX6 as seed ortholog is 100%.
Bootstrap support for F1N9Y0 as seed ortholog is 100%.

Group of orthologs #610. Best score 718 bits
Score difference with first non-orthologous sequence - C.intestinalis:718 G.gallus:569

F6WR85              	100.00%		Q5ZM32              	100.00%
Bootstrap support for F6WR85 as seed ortholog is 100%.
Bootstrap support for Q5ZM32 as seed ortholog is 100%.

Group of orthologs #611. Best score 718 bits
Score difference with first non-orthologous sequence - C.intestinalis:564 G.gallus:538

F7AQG9              	100.00%		Q5ZKV8              	100.00%
Bootstrap support for F7AQG9 as seed ortholog is 100%.
Bootstrap support for Q5ZKV8 as seed ortholog is 100%.

Group of orthologs #612. Best score 717 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:213

F6V5B4              	100.00%		E1C8K0              	100.00%
F6SGT8              	29.34%		
Bootstrap support for F6V5B4 as seed ortholog is 100%.
Bootstrap support for E1C8K0 as seed ortholog is 100%.

Group of orthologs #613. Best score 717 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 G.gallus:581

F6Q0U4              	100.00%		Q5ZJ54              	100.00%
                    	       		F1NWH9              	98.38%
Bootstrap support for F6Q0U4 as seed ortholog is 100%.
Bootstrap support for Q5ZJ54 as seed ortholog is 100%.

Group of orthologs #614. Best score 717 bits
Score difference with first non-orthologous sequence - C.intestinalis:717 G.gallus:615

F6X3Q7              	100.00%		F1NH65              	100.00%
Bootstrap support for F6X3Q7 as seed ortholog is 100%.
Bootstrap support for F1NH65 as seed ortholog is 100%.

Group of orthologs #615. Best score 717 bits
Score difference with first non-orthologous sequence - C.intestinalis:717 G.gallus:616

F6Y9D9              	100.00%		F1P1J6              	100.00%
Bootstrap support for F6Y9D9 as seed ortholog is 100%.
Bootstrap support for F1P1J6 as seed ortholog is 100%.

Group of orthologs #616. Best score 717 bits
Score difference with first non-orthologous sequence - C.intestinalis:717 G.gallus:717

F6VDB6              	100.00%		Q5F361              	100.00%
Bootstrap support for F6VDB6 as seed ortholog is 100%.
Bootstrap support for Q5F361 as seed ortholog is 100%.

Group of orthologs #617. Best score 716 bits
Score difference with first non-orthologous sequence - C.intestinalis:620 G.gallus:716

F6WYI9              	100.00%		E1C3U6              	100.00%
Bootstrap support for F6WYI9 as seed ortholog is 100%.
Bootstrap support for E1C3U6 as seed ortholog is 100%.

Group of orthologs #618. Best score 716 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 G.gallus:173

F6Y9W3              	100.00%		F1NIV1              	100.00%
Bootstrap support for F6Y9W3 as seed ortholog is 99%.
Bootstrap support for F1NIV1 as seed ortholog is 99%.

Group of orthologs #619. Best score 716 bits
Score difference with first non-orthologous sequence - C.intestinalis:716 G.gallus:237

F6QID5              	100.00%		Q6R748              	100.00%
Bootstrap support for F6QID5 as seed ortholog is 100%.
Bootstrap support for Q6R748 as seed ortholog is 100%.

Group of orthologs #620. Best score 715 bits
Score difference with first non-orthologous sequence - C.intestinalis:715 G.gallus:715

F6VFC5              	100.00%		Q5ZJY5              	100.00%
Bootstrap support for F6VFC5 as seed ortholog is 100%.
Bootstrap support for Q5ZJY5 as seed ortholog is 100%.

Group of orthologs #621. Best score 714 bits
Score difference with first non-orthologous sequence - C.intestinalis:641 G.gallus:345

F6YKJ2              	100.00%		Q5ZIV1              	100.00%
                    	       		F1NGM1              	39.47%
                    	       		E1BRL5              	22.81%
Bootstrap support for F6YKJ2 as seed ortholog is 100%.
Bootstrap support for Q5ZIV1 as seed ortholog is 100%.

Group of orthologs #622. Best score 714 bits
Score difference with first non-orthologous sequence - C.intestinalis:665 G.gallus:518

F6T718              	100.00%		Q5ZIU3              	100.00%
                    	       		F1ND56              	14.85%
Bootstrap support for F6T718 as seed ortholog is 100%.
Bootstrap support for Q5ZIU3 as seed ortholog is 100%.

Group of orthologs #623. Best score 714 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 G.gallus:516

F6TWF6              	100.00%		E1C4W4              	100.00%
Bootstrap support for F6TWF6 as seed ortholog is 100%.
Bootstrap support for E1C4W4 as seed ortholog is 100%.

Group of orthologs #624. Best score 713 bits
Score difference with first non-orthologous sequence - C.intestinalis:713 G.gallus:589

F6QWS2              	100.00%		F1NDY9              	100.00%
Bootstrap support for F6QWS2 as seed ortholog is 100%.
Bootstrap support for F1NDY9 as seed ortholog is 100%.

Group of orthologs #625. Best score 713 bits
Score difference with first non-orthologous sequence - C.intestinalis:713 G.gallus:713

F6T283              	100.00%		F1N899              	100.00%
Bootstrap support for F6T283 as seed ortholog is 100%.
Bootstrap support for F1N899 as seed ortholog is 100%.

Group of orthologs #626. Best score 713 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 G.gallus:205

F6XVE4              	100.00%		F1NDK8              	100.00%
Bootstrap support for F6XVE4 as seed ortholog is 100%.
Bootstrap support for F1NDK8 as seed ortholog is 99%.

Group of orthologs #627. Best score 713 bits
Score difference with first non-orthologous sequence - C.intestinalis:713 G.gallus:713

F6V9G2              	100.00%		F1NVK4              	100.00%
Bootstrap support for F6V9G2 as seed ortholog is 100%.
Bootstrap support for F1NVK4 as seed ortholog is 100%.

Group of orthologs #628. Best score 713 bits
Score difference with first non-orthologous sequence - C.intestinalis:713 G.gallus:575

F6WIL6              	100.00%		F1P2S9              	100.00%
Bootstrap support for F6WIL6 as seed ortholog is 100%.
Bootstrap support for F1P2S9 as seed ortholog is 100%.

Group of orthologs #629. Best score 713 bits
Score difference with first non-orthologous sequence - C.intestinalis:713 G.gallus:713

F6TPA2              	100.00%		Q5F387              	100.00%
Bootstrap support for F6TPA2 as seed ortholog is 100%.
Bootstrap support for Q5F387 as seed ortholog is 100%.

Group of orthologs #630. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:559 G.gallus:245

F6TAP2              	100.00%		F1NEW7              	100.00%
                    	       		Q90980              	24.04%
                    	       		F1NAI9              	15.94%
Bootstrap support for F6TAP2 as seed ortholog is 100%.
Bootstrap support for F1NEW7 as seed ortholog is 100%.

Group of orthologs #631. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:712 G.gallus:712

F6RCY1              	100.00%		F1NPT1              	100.00%
                    	       		F1NXP4              	22.14%
Bootstrap support for F6RCY1 as seed ortholog is 100%.
Bootstrap support for F1NPT1 as seed ortholog is 100%.

Group of orthologs #632. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 G.gallus:430

F6VL21              	100.00%		F1NTL1              	100.00%
                    	       		H9L141              	5.24%
Bootstrap support for F6VL21 as seed ortholog is 100%.
Bootstrap support for F1NTL1 as seed ortholog is 100%.

Group of orthologs #633. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:712 G.gallus:712

F6QDE3              	100.00%		F1NH69              	100.00%
Bootstrap support for F6QDE3 as seed ortholog is 100%.
Bootstrap support for F1NH69 as seed ortholog is 100%.

Group of orthologs #634. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 G.gallus:712

H2XQT6              	100.00%		E1C0W9              	100.00%
Bootstrap support for H2XQT6 as seed ortholog is 100%.
Bootstrap support for E1C0W9 as seed ortholog is 100%.

Group of orthologs #635. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 G.gallus:712

F6XH38              	100.00%		F1NQZ9              	100.00%
Bootstrap support for F6XH38 as seed ortholog is 99%.
Bootstrap support for F1NQZ9 as seed ortholog is 100%.

Group of orthologs #636. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:712 G.gallus:622

H2XU69              	100.00%		F1NWS9              	100.00%
Bootstrap support for H2XU69 as seed ortholog is 100%.
Bootstrap support for F1NWS9 as seed ortholog is 100%.

Group of orthologs #637. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:712 G.gallus:712

F7AYB9              	100.00%		Q5ZJQ6              	100.00%
Bootstrap support for F7AYB9 as seed ortholog is 100%.
Bootstrap support for Q5ZJQ6 as seed ortholog is 100%.

Group of orthologs #638. Best score 711 bits
Score difference with first non-orthologous sequence - C.intestinalis:583 G.gallus:297

H2XLI9              	100.00%		F1NBY6              	100.00%
                    	       		Q9PT84              	100.00%
                    	       		F1NDW6              	31.23%
Bootstrap support for H2XLI9 as seed ortholog is 100%.
Bootstrap support for F1NBY6 as seed ortholog is 100%.
Bootstrap support for Q9PT84 as seed ortholog is 100%.

Group of orthologs #639. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:710 G.gallus:710

F6U1K7              	100.00%		F1NF42              	100.00%
Bootstrap support for F6U1K7 as seed ortholog is 100%.
Bootstrap support for F1NF42 as seed ortholog is 100%.

Group of orthologs #640. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 G.gallus:710

F6S7U7              	100.00%		P00368              	100.00%
Bootstrap support for F6S7U7 as seed ortholog is 100%.
Bootstrap support for P00368 as seed ortholog is 100%.

Group of orthologs #641. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:710 G.gallus:463

F7BQ30              	100.00%		F1NU73              	100.00%
Bootstrap support for F7BQ30 as seed ortholog is 100%.
Bootstrap support for F1NU73 as seed ortholog is 100%.

Group of orthologs #642. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:710 G.gallus:176

H2XWW7              	100.00%		F1NGM0              	100.00%
Bootstrap support for H2XWW7 as seed ortholog is 100%.
Bootstrap support for F1NGM0 as seed ortholog is 100%.

Group of orthologs #643. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:710 G.gallus:710

H2XM66              	100.00%		Q5ZLS3              	100.00%
Bootstrap support for H2XM66 as seed ortholog is 100%.
Bootstrap support for Q5ZLS3 as seed ortholog is 100%.

Group of orthologs #644. Best score 709 bits
Score difference with first non-orthologous sequence - C.intestinalis:709 G.gallus:709

F6VRH3              	100.00%		H9KZS1              	100.00%
                    	       		F1NAV7              	36.74%
Bootstrap support for F6VRH3 as seed ortholog is 100%.
Bootstrap support for H9KZS1 as seed ortholog is 100%.

Group of orthologs #645. Best score 709 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 G.gallus:415

F6YDG7              	100.00%		F1NHI3              	100.00%
Bootstrap support for F6YDG7 as seed ortholog is 99%.
Bootstrap support for F1NHI3 as seed ortholog is 100%.

Group of orthologs #646. Best score 709 bits
Score difference with first non-orthologous sequence - C.intestinalis:709 G.gallus:709

F6Y025              	100.00%		F1P294              	100.00%
Bootstrap support for F6Y025 as seed ortholog is 100%.
Bootstrap support for F1P294 as seed ortholog is 100%.

Group of orthologs #647. Best score 707 bits
Score difference with first non-orthologous sequence - C.intestinalis:707 G.gallus:707

F7A429              	100.00%		F1P1A5              	100.00%
Bootstrap support for F7A429 as seed ortholog is 100%.
Bootstrap support for F1P1A5 as seed ortholog is 100%.

Group of orthologs #648. Best score 706 bits
Score difference with first non-orthologous sequence - C.intestinalis:706 G.gallus:706

F6XRI7              	100.00%		F1NNJ3              	100.00%
Bootstrap support for F6XRI7 as seed ortholog is 100%.
Bootstrap support for F1NNJ3 as seed ortholog is 100%.

Group of orthologs #649. Best score 705 bits
Score difference with first non-orthologous sequence - C.intestinalis:417 G.gallus:73

F6U0I8              	100.00%		E1BSE2              	100.00%
Bootstrap support for F6U0I8 as seed ortholog is 100%.
Bootstrap support for E1BSE2 as seed ortholog is 97%.

Group of orthologs #650. Best score 705 bits
Score difference with first non-orthologous sequence - C.intestinalis:705 G.gallus:272

H2XNA5              	100.00%		E1C7U7              	100.00%
Bootstrap support for H2XNA5 as seed ortholog is 100%.
Bootstrap support for E1C7U7 as seed ortholog is 100%.

Group of orthologs #651. Best score 705 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 G.gallus:309

F6ZFK4              	100.00%		F1P5V4              	100.00%
Bootstrap support for F6ZFK4 as seed ortholog is 88%.
Bootstrap support for F1P5V4 as seed ortholog is 100%.

Group of orthologs #652. Best score 705 bits
Score difference with first non-orthologous sequence - C.intestinalis:705 G.gallus:705

F6YYY1              	100.00%		Q5ZLF4              	100.00%
Bootstrap support for F6YYY1 as seed ortholog is 100%.
Bootstrap support for Q5ZLF4 as seed ortholog is 100%.

Group of orthologs #653. Best score 704 bits
Score difference with first non-orthologous sequence - C.intestinalis:704 G.gallus:400

F6V6X8              	100.00%		E1BT39              	100.00%
                    	       		E1BT40              	34.94%
Bootstrap support for F6V6X8 as seed ortholog is 100%.
Bootstrap support for E1BT39 as seed ortholog is 100%.

Group of orthologs #654. Best score 704 bits
Score difference with first non-orthologous sequence - C.intestinalis:704 G.gallus:704

F6ZHD7              	100.00%		F1NYJ6              	100.00%
Bootstrap support for F6ZHD7 as seed ortholog is 100%.
Bootstrap support for F1NYJ6 as seed ortholog is 100%.

Group of orthologs #655. Best score 704 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 G.gallus:540

F7BHP4              	100.00%		F1NU79              	100.00%
Bootstrap support for F7BHP4 as seed ortholog is 100%.
Bootstrap support for F1NU79 as seed ortholog is 100%.

Group of orthologs #656. Best score 703 bits
Score difference with first non-orthologous sequence - C.intestinalis:703 G.gallus:703

F6R7B5              	100.00%		E1BW54              	100.00%
Bootstrap support for F6R7B5 as seed ortholog is 100%.
Bootstrap support for E1BW54 as seed ortholog is 100%.

Group of orthologs #657. Best score 703 bits
Score difference with first non-orthologous sequence - C.intestinalis:703 G.gallus:703

F7B4V9              	100.00%		E1C339              	100.00%
Bootstrap support for F7B4V9 as seed ortholog is 100%.
Bootstrap support for E1C339 as seed ortholog is 100%.

Group of orthologs #658. Best score 702 bits
Score difference with first non-orthologous sequence - C.intestinalis:702 G.gallus:557

H2XUE6              	100.00%		F1NY66              	100.00%
                    	       		F1NHB4              	10.99%
Bootstrap support for H2XUE6 as seed ortholog is 100%.
Bootstrap support for F1NY66 as seed ortholog is 100%.

Group of orthologs #659. Best score 702 bits
Score difference with first non-orthologous sequence - C.intestinalis:702 G.gallus:702

H2XL64              	100.00%		E1BWW3              	100.00%
Bootstrap support for H2XL64 as seed ortholog is 100%.
Bootstrap support for E1BWW3 as seed ortholog is 100%.

Group of orthologs #660. Best score 701 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 G.gallus:89

F6XIK7              	100.00%		Q90687              	100.00%
                    	       		E1BTC5              	20.62%
Bootstrap support for F6XIK7 as seed ortholog is 100%.
Bootstrap support for Q90687 as seed ortholog is 98%.

Group of orthologs #661. Best score 701 bits
Score difference with first non-orthologous sequence - C.intestinalis:701 G.gallus:701

F6XK10              	100.00%		E1BXI7              	100.00%
Bootstrap support for F6XK10 as seed ortholog is 100%.
Bootstrap support for E1BXI7 as seed ortholog is 100%.

Group of orthologs #662. Best score 701 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 G.gallus:501

F6UWX3              	100.00%		F1NCS8              	100.00%
Bootstrap support for F6UWX3 as seed ortholog is 100%.
Bootstrap support for F1NCS8 as seed ortholog is 100%.

Group of orthologs #663. Best score 701 bits
Score difference with first non-orthologous sequence - C.intestinalis:701 G.gallus:657

F6VEU9              	100.00%		F1NZQ2              	100.00%
Bootstrap support for F6VEU9 as seed ortholog is 100%.
Bootstrap support for F1NZQ2 as seed ortholog is 100%.

Group of orthologs #664. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 G.gallus:109

F6YWW9              	100.00%		F1NXT1              	100.00%
F6WDF7              	26.29%		
Bootstrap support for F6YWW9 as seed ortholog is 99%.
Bootstrap support for F1NXT1 as seed ortholog is 94%.

Group of orthologs #665. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:700 G.gallus:357

F6U465              	100.00%		E1C0M5              	100.00%
Bootstrap support for F6U465 as seed ortholog is 100%.
Bootstrap support for E1C0M5 as seed ortholog is 100%.

Group of orthologs #666. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:700 G.gallus:309

F7AK99              	100.00%		E1BT72              	100.00%
Bootstrap support for F7AK99 as seed ortholog is 100%.
Bootstrap support for E1BT72 as seed ortholog is 100%.

Group of orthologs #667. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:700 G.gallus:700

F6SH99              	100.00%		F1NX73              	100.00%
Bootstrap support for F6SH99 as seed ortholog is 100%.
Bootstrap support for F1NX73 as seed ortholog is 100%.

Group of orthologs #668. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:700 G.gallus:201

F6V549              	100.00%		F1NU68              	100.00%
Bootstrap support for F6V549 as seed ortholog is 100%.
Bootstrap support for F1NU68 as seed ortholog is 99%.

Group of orthologs #669. Best score 699 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 G.gallus:487

F6YGC1              	100.00%		E1C187              	100.00%
Bootstrap support for F6YGC1 as seed ortholog is 100%.
Bootstrap support for E1C187 as seed ortholog is 100%.

Group of orthologs #670. Best score 698 bits
Score difference with first non-orthologous sequence - C.intestinalis:698 G.gallus:698

F6YU96              	100.00%		E1C254              	100.00%
Bootstrap support for F6YU96 as seed ortholog is 100%.
Bootstrap support for E1C254 as seed ortholog is 100%.

Group of orthologs #671. Best score 698 bits
Score difference with first non-orthologous sequence - C.intestinalis:698 G.gallus:698

A1XDA5              	100.00%		Q5ZII9              	100.00%
Bootstrap support for A1XDA5 as seed ortholog is 100%.
Bootstrap support for Q5ZII9 as seed ortholog is 100%.

Group of orthologs #672. Best score 697 bits
Score difference with first non-orthologous sequence - C.intestinalis:697 G.gallus:697

F7AEC5              	100.00%		F1NHT7              	100.00%
Bootstrap support for F7AEC5 as seed ortholog is 100%.
Bootstrap support for F1NHT7 as seed ortholog is 100%.

Group of orthologs #673. Best score 696 bits
Score difference with first non-orthologous sequence - C.intestinalis:696 G.gallus:696

F6Y921              	100.00%		F1NJ89              	100.00%
Bootstrap support for F6Y921 as seed ortholog is 100%.
Bootstrap support for F1NJ89 as seed ortholog is 100%.

Group of orthologs #674. Best score 696 bits
Score difference with first non-orthologous sequence - C.intestinalis:696 G.gallus:159

F6X9E5              	100.00%		H9KYX6              	100.00%
Bootstrap support for F6X9E5 as seed ortholog is 100%.
Bootstrap support for H9KYX6 as seed ortholog is 99%.

Group of orthologs #675. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:695 G.gallus:391

F6TPD4              	100.00%		F1NKF1              	100.00%
                    	       		F1P0S5              	100.00%
                    	       		F1P0E2              	59.85%
                    	       		F1P5Y1              	50.28%
Bootstrap support for F6TPD4 as seed ortholog is 100%.
Bootstrap support for F1NKF1 as seed ortholog is 100%.
Bootstrap support for F1P0S5 as seed ortholog is 100%.

Group of orthologs #676. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:695 G.gallus:625

Q4H372              	100.00%		E1C4P2              	100.00%
                    	       		E1BZ44              	17.74%
Bootstrap support for Q4H372 as seed ortholog is 100%.
Bootstrap support for E1C4P2 as seed ortholog is 100%.

Group of orthologs #677. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:695 G.gallus:695

F6WEC9              	100.00%		F1NMJ6              	100.00%
Bootstrap support for F6WEC9 as seed ortholog is 100%.
Bootstrap support for F1NMJ6 as seed ortholog is 100%.

Group of orthologs #678. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:695 G.gallus:695

F7B9U5              	100.00%		F1P531              	100.00%
Bootstrap support for F7B9U5 as seed ortholog is 100%.
Bootstrap support for F1P531 as seed ortholog is 100%.

Group of orthologs #679. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:695 G.gallus:695

H2Y0P6              	100.00%		F1P0Z2              	100.00%
Bootstrap support for H2Y0P6 as seed ortholog is 100%.
Bootstrap support for F1P0Z2 as seed ortholog is 100%.

Group of orthologs #680. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 G.gallus:693

F6ZWW6              	100.00%		F1NIM3              	100.00%
                    	       		H9L0F8              	89.71%
Bootstrap support for F6ZWW6 as seed ortholog is 100%.
Bootstrap support for F1NIM3 as seed ortholog is 100%.

Group of orthologs #681. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 G.gallus:693

F7AHE5              	100.00%		H9L003              	100.00%
                    	       		E1BRT8              	30.88%
Bootstrap support for F7AHE5 as seed ortholog is 100%.
Bootstrap support for H9L003 as seed ortholog is 100%.

Group of orthologs #682. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 G.gallus:693

F6YY15              	100.00%		F1NAV2              	100.00%
Bootstrap support for F6YY15 as seed ortholog is 100%.
Bootstrap support for F1NAV2 as seed ortholog is 100%.

Group of orthologs #683. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:693 G.gallus:693

F7B580              	100.00%		Q5ZJ61              	100.00%
Bootstrap support for F7B580 as seed ortholog is 100%.
Bootstrap support for Q5ZJ61 as seed ortholog is 100%.

Group of orthologs #684. Best score 692 bits
Score difference with first non-orthologous sequence - C.intestinalis:692 G.gallus:692

F6UQJ9              	100.00%		E1BV07              	100.00%
                    	       		E1BZM3              	46.27%
Bootstrap support for F6UQJ9 as seed ortholog is 100%.
Bootstrap support for E1BV07 as seed ortholog is 100%.

Group of orthologs #685. Best score 692 bits
Score difference with first non-orthologous sequence - C.intestinalis:692 G.gallus:692

F6Q8U3              	100.00%		F1P2A7              	100.00%
Bootstrap support for F6Q8U3 as seed ortholog is 100%.
Bootstrap support for F1P2A7 as seed ortholog is 100%.

Group of orthologs #686. Best score 692 bits
Score difference with first non-orthologous sequence - C.intestinalis:557 G.gallus:506

F6XT42              	100.00%		F1P0S9              	100.00%
Bootstrap support for F6XT42 as seed ortholog is 100%.
Bootstrap support for F1P0S9 as seed ortholog is 100%.

Group of orthologs #687. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 G.gallus:691

F7AQA9              	100.00%		E1BU49              	100.00%
Bootstrap support for F7AQA9 as seed ortholog is 100%.
Bootstrap support for E1BU49 as seed ortholog is 100%.

Group of orthologs #688. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 G.gallus:691

F6Q601              	100.00%		F1NXV4              	100.00%
Bootstrap support for F6Q601 as seed ortholog is 100%.
Bootstrap support for F1NXV4 as seed ortholog is 100%.

Group of orthologs #689. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 G.gallus:691

F6W1Y5              	100.00%		F1NKH9              	100.00%
Bootstrap support for F6W1Y5 as seed ortholog is 100%.
Bootstrap support for F1NKH9 as seed ortholog is 100%.

Group of orthologs #690. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 G.gallus:409

F6R2Y1              	100.00%		F1P258              	100.00%
Bootstrap support for F6R2Y1 as seed ortholog is 100%.
Bootstrap support for F1P258 as seed ortholog is 100%.

Group of orthologs #691. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 G.gallus:691

H2Y288              	100.00%		F1NNP8              	100.00%
Bootstrap support for H2Y288 as seed ortholog is 100%.
Bootstrap support for F1NNP8 as seed ortholog is 100%.

Group of orthologs #692. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 G.gallus:370

F6T060              	100.00%		Q5F420              	100.00%
F6SZU4              	49.86%		F1P2G8              	47.25%
                    	       		F1NNV2              	31.82%
Bootstrap support for F6T060 as seed ortholog is 100%.
Bootstrap support for Q5F420 as seed ortholog is 100%.

Group of orthologs #693. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:690 G.gallus:690

F6PWP3              	100.00%		F1NEH3              	100.00%
Bootstrap support for F6PWP3 as seed ortholog is 100%.
Bootstrap support for F1NEH3 as seed ortholog is 100%.

Group of orthologs #694. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:690 G.gallus:690

F6RAB3              	100.00%		P56520              	100.00%
Bootstrap support for F6RAB3 as seed ortholog is 100%.
Bootstrap support for P56520 as seed ortholog is 100%.

Group of orthologs #695. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:690 G.gallus:690

F6YL86              	100.00%		F1NYG7              	100.00%
Bootstrap support for F6YL86 as seed ortholog is 100%.
Bootstrap support for F1NYG7 as seed ortholog is 100%.

Group of orthologs #696. Best score 689 bits
Score difference with first non-orthologous sequence - C.intestinalis:689 G.gallus:689

F6TZ29              	100.00%		Q5ZKY2              	100.00%
Bootstrap support for F6TZ29 as seed ortholog is 100%.
Bootstrap support for Q5ZKY2 as seed ortholog is 100%.

Group of orthologs #697. Best score 688 bits
Score difference with first non-orthologous sequence - C.intestinalis:553 G.gallus:378

F6ZCE0              	100.00%		F1N8W8              	100.00%
                    	       		E1C3P6              	43.96%
                    	       		E1BS97              	30.59%
Bootstrap support for F6ZCE0 as seed ortholog is 100%.
Bootstrap support for F1N8W8 as seed ortholog is 100%.

Group of orthologs #698. Best score 688 bits
Score difference with first non-orthologous sequence - C.intestinalis:688 G.gallus:688

H2XWM6              	100.00%		F1NK09              	100.00%
Bootstrap support for H2XWM6 as seed ortholog is 100%.
Bootstrap support for F1NK09 as seed ortholog is 100%.

Group of orthologs #699. Best score 688 bits
Score difference with first non-orthologous sequence - C.intestinalis:688 G.gallus:688

F6XWY9              	100.00%		Q5ZK91              	100.00%
Bootstrap support for F6XWY9 as seed ortholog is 100%.
Bootstrap support for Q5ZK91 as seed ortholog is 100%.

Group of orthologs #700. Best score 688 bits
Score difference with first non-orthologous sequence - C.intestinalis:688 G.gallus:688

Q1RPU5              	100.00%		F1NQ64              	100.00%
Bootstrap support for Q1RPU5 as seed ortholog is 100%.
Bootstrap support for F1NQ64 as seed ortholog is 100%.

Group of orthologs #701. Best score 687 bits
Score difference with first non-orthologous sequence - C.intestinalis:687 G.gallus:687

F6YXZ3              	100.00%		F1NRM0              	100.00%
Bootstrap support for F6YXZ3 as seed ortholog is 100%.
Bootstrap support for F1NRM0 as seed ortholog is 100%.

Group of orthologs #702. Best score 686 bits
Score difference with first non-orthologous sequence - C.intestinalis:686 G.gallus:686

F6SKU8              	100.00%		F1NI86              	100.00%
Bootstrap support for F6SKU8 as seed ortholog is 100%.
Bootstrap support for F1NI86 as seed ortholog is 100%.

Group of orthologs #703. Best score 686 bits
Score difference with first non-orthologous sequence - C.intestinalis:686 G.gallus:686

F6QB99              	100.00%		F1NY29              	100.00%
Bootstrap support for F6QB99 as seed ortholog is 100%.
Bootstrap support for F1NY29 as seed ortholog is 100%.

Group of orthologs #704. Best score 685 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 G.gallus:330

F6PPJ1              	100.00%		E1BWA3              	100.00%
                    	       		E1BQN6              	36.96%
Bootstrap support for F6PPJ1 as seed ortholog is 100%.
Bootstrap support for E1BWA3 as seed ortholog is 100%.

Group of orthologs #705. Best score 685 bits
Score difference with first non-orthologous sequence - C.intestinalis:685 G.gallus:456

F6TZU9              	100.00%		F1NN99              	100.00%
Bootstrap support for F6TZU9 as seed ortholog is 100%.
Bootstrap support for F1NN99 as seed ortholog is 100%.

Group of orthologs #706. Best score 683 bits
Score difference with first non-orthologous sequence - C.intestinalis:683 G.gallus:580

F6QNQ9              	100.00%		Q9PU45              	100.00%
                    	       		E1BV34              	56.00%
                    	       		F1P3H9              	44.63%
Bootstrap support for F6QNQ9 as seed ortholog is 100%.
Bootstrap support for Q9PU45 as seed ortholog is 100%.

Group of orthologs #707. Best score 683 bits
Score difference with first non-orthologous sequence - C.intestinalis:683 G.gallus:427

F6Z726              	100.00%		F1N829              	100.00%
Bootstrap support for F6Z726 as seed ortholog is 100%.
Bootstrap support for F1N829 as seed ortholog is 100%.

Group of orthologs #708. Best score 682 bits
Score difference with first non-orthologous sequence - C.intestinalis:682 G.gallus:682

F6Y2U7              	100.00%		Q5F3F5              	100.00%
Bootstrap support for F6Y2U7 as seed ortholog is 100%.
Bootstrap support for Q5F3F5 as seed ortholog is 100%.

Group of orthologs #709. Best score 682 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 G.gallus:588

H2Y1L4              	100.00%		F1P0N6              	100.00%
Bootstrap support for H2Y1L4 as seed ortholog is 100%.
Bootstrap support for F1P0N6 as seed ortholog is 100%.

Group of orthologs #710. Best score 681 bits
Score difference with first non-orthologous sequence - C.intestinalis:681 G.gallus:681

F6YEG0              	100.00%		E1C0D8              	100.00%
Bootstrap support for F6YEG0 as seed ortholog is 100%.
Bootstrap support for E1C0D8 as seed ortholog is 100%.

Group of orthologs #711. Best score 681 bits
Score difference with first non-orthologous sequence - C.intestinalis:681 G.gallus:681

F6S902              	100.00%		F1P174              	100.00%
Bootstrap support for F6S902 as seed ortholog is 100%.
Bootstrap support for F1P174 as seed ortholog is 100%.

Group of orthologs #712. Best score 681 bits
Score difference with first non-orthologous sequence - C.intestinalis:681 G.gallus:300

F6YKX8              	100.00%		F1NEM8              	100.00%
Bootstrap support for F6YKX8 as seed ortholog is 100%.
Bootstrap support for F1NEM8 as seed ortholog is 100%.

Group of orthologs #713. Best score 681 bits
Score difference with first non-orthologous sequence - C.intestinalis:681 G.gallus:681

H2XKW2              	100.00%		F1NVJ9              	100.00%
Bootstrap support for H2XKW2 as seed ortholog is 100%.
Bootstrap support for F1NVJ9 as seed ortholog is 100%.

Group of orthologs #714. Best score 680 bits
Score difference with first non-orthologous sequence - C.intestinalis:680 G.gallus:680

F6S2V8              	100.00%		F1N9Q3              	100.00%
                    	       		E1C814              	32.49%
                    	       		F1NNP7              	8.37%
Bootstrap support for F6S2V8 as seed ortholog is 100%.
Bootstrap support for F1N9Q3 as seed ortholog is 100%.

Group of orthologs #715. Best score 680 bits
Score difference with first non-orthologous sequence - C.intestinalis:680 G.gallus:680

F6TAK3              	100.00%		E1BWC0              	100.00%
                    	       		Q2VB19              	64.81%
Bootstrap support for F6TAK3 as seed ortholog is 100%.
Bootstrap support for E1BWC0 as seed ortholog is 100%.

Group of orthologs #716. Best score 680 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 G.gallus:39

F6XTN6              	100.00%		F1NZX8              	100.00%
                    	       		F1NZ44              	32.63%
Bootstrap support for F6XTN6 as seed ortholog is 99%.
Bootstrap support for F1NZX8 as seed ortholog is 81%.

Group of orthologs #717. Best score 680 bits
Score difference with first non-orthologous sequence - C.intestinalis:680 G.gallus:680

F6YQ60              	100.00%		E1C9A9              	100.00%
Bootstrap support for F6YQ60 as seed ortholog is 100%.
Bootstrap support for E1C9A9 as seed ortholog is 100%.

Group of orthologs #718. Best score 679 bits
Score difference with first non-orthologous sequence - C.intestinalis:679 G.gallus:601

H2XLM3              	100.00%		F1NP23              	100.00%
                    	       		F1NDL4              	11.08%
Bootstrap support for H2XLM3 as seed ortholog is 100%.
Bootstrap support for F1NP23 as seed ortholog is 100%.

Group of orthologs #719. Best score 679 bits
Score difference with first non-orthologous sequence - C.intestinalis:679 G.gallus:679

F6SQE9              	100.00%		F1P591              	100.00%
Bootstrap support for F6SQE9 as seed ortholog is 100%.
Bootstrap support for F1P591 as seed ortholog is 100%.

Group of orthologs #720. Best score 678 bits
Score difference with first non-orthologous sequence - C.intestinalis:678 G.gallus:678

F6U609              	100.00%		E1BUS2              	100.00%
Bootstrap support for F6U609 as seed ortholog is 100%.
Bootstrap support for E1BUS2 as seed ortholog is 100%.

Group of orthologs #721. Best score 678 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 G.gallus:99

F6TSL2              	100.00%		F1NFT0              	100.00%
Bootstrap support for F6TSL2 as seed ortholog is 100%.
Bootstrap support for F1NFT0 as seed ortholog is 98%.

Group of orthologs #722. Best score 677 bits
Score difference with first non-orthologous sequence - C.intestinalis:677 G.gallus:677

H2Y3P6              	100.00%		F1NLK6              	100.00%
                    	       		F1NY08              	100.00%
Bootstrap support for H2Y3P6 as seed ortholog is 100%.
Bootstrap support for F1NLK6 as seed ortholog is 100%.
Bootstrap support for F1NY08 as seed ortholog is 100%.

Group of orthologs #723. Best score 677 bits
Score difference with first non-orthologous sequence - C.intestinalis:677 G.gallus:677

F6T5V0              	100.00%		Q5F3T9              	100.00%
Bootstrap support for F6T5V0 as seed ortholog is 100%.
Bootstrap support for Q5F3T9 as seed ortholog is 100%.

Group of orthologs #724. Best score 677 bits
Score difference with first non-orthologous sequence - C.intestinalis:677 G.gallus:677

F7BL51              	100.00%		P21265              	100.00%
Bootstrap support for F7BL51 as seed ortholog is 100%.
Bootstrap support for P21265 as seed ortholog is 100%.

Group of orthologs #725. Best score 676 bits
Score difference with first non-orthologous sequence - C.intestinalis:676 G.gallus:570

F6R4T5              	100.00%		F1NQH4              	100.00%
Bootstrap support for F6R4T5 as seed ortholog is 100%.
Bootstrap support for F1NQH4 as seed ortholog is 100%.

Group of orthologs #726. Best score 676 bits
Score difference with first non-orthologous sequence - C.intestinalis:676 G.gallus:676

H2XPX0              	100.00%		A6N7Y9              	100.00%
Bootstrap support for H2XPX0 as seed ortholog is 100%.
Bootstrap support for A6N7Y9 as seed ortholog is 100%.

Group of orthologs #727. Best score 676 bits
Score difference with first non-orthologous sequence - C.intestinalis:676 G.gallus:676

H2XXJ0              	100.00%		F1NF96              	100.00%
Bootstrap support for H2XXJ0 as seed ortholog is 100%.
Bootstrap support for F1NF96 as seed ortholog is 100%.

Group of orthologs #728. Best score 675 bits
Score difference with first non-orthologous sequence - C.intestinalis:675 G.gallus:675

F6ZY44              	100.00%		F1ND13              	100.00%
                    	       		F1NTT1              	23.97%
Bootstrap support for F6ZY44 as seed ortholog is 100%.
Bootstrap support for F1ND13 as seed ortholog is 100%.

Group of orthologs #729. Best score 674 bits
Score difference with first non-orthologous sequence - C.intestinalis:674 G.gallus:674

F6U2M6              	100.00%		Q5ZJH9              	100.00%
Bootstrap support for F6U2M6 as seed ortholog is 100%.
Bootstrap support for Q5ZJH9 as seed ortholog is 100%.

Group of orthologs #730. Best score 673 bits
Score difference with first non-orthologous sequence - C.intestinalis:673 G.gallus:673

F6XIP9              	100.00%		F1NCE1              	100.00%
Bootstrap support for F6XIP9 as seed ortholog is 100%.
Bootstrap support for F1NCE1 as seed ortholog is 100%.

Group of orthologs #731. Best score 673 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 G.gallus:673

F6UTT2              	100.00%		F1NN67              	100.00%
Bootstrap support for F6UTT2 as seed ortholog is 95%.
Bootstrap support for F1NN67 as seed ortholog is 100%.

Group of orthologs #732. Best score 673 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 G.gallus:384

F7ABR6              	100.00%		F1NY37              	100.00%
Bootstrap support for F7ABR6 as seed ortholog is 100%.
Bootstrap support for F1NY37 as seed ortholog is 100%.

Group of orthologs #733. Best score 672 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 G.gallus:224

H2XPB4              	100.00%		Q5ZJZ0              	100.00%
                    	       		E1C4J0              	56.56%
                    	       		Q5ZML1              	47.30%
Bootstrap support for H2XPB4 as seed ortholog is 100%.
Bootstrap support for Q5ZJZ0 as seed ortholog is 100%.

Group of orthologs #734. Best score 672 bits
Score difference with first non-orthologous sequence - C.intestinalis:672 G.gallus:672

F6S6E8              	100.00%		F1P4G0              	100.00%
Bootstrap support for F6S6E8 as seed ortholog is 100%.
Bootstrap support for F1P4G0 as seed ortholog is 100%.

Group of orthologs #735. Best score 671 bits
Score difference with first non-orthologous sequence - C.intestinalis:671 G.gallus:671

F6QIK7              	100.00%		F1NX95              	100.00%
Bootstrap support for F6QIK7 as seed ortholog is 100%.
Bootstrap support for F1NX95 as seed ortholog is 100%.

Group of orthologs #736. Best score 670 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 G.gallus:120

F6TXB9              	100.00%		P09324              	100.00%
F6XP43              	26.80%		P00523              	33.71%
                    	       		Q05876              	30.56%
                    	       		Q02977              	27.42%
Bootstrap support for F6TXB9 as seed ortholog is 99%.
Bootstrap support for P09324 as seed ortholog is 99%.

Group of orthologs #737. Best score 670 bits
Score difference with first non-orthologous sequence - C.intestinalis:670 G.gallus:670

F6VZ84              	100.00%		Q5ZIZ4              	100.00%
Bootstrap support for F6VZ84 as seed ortholog is 100%.
Bootstrap support for Q5ZIZ4 as seed ortholog is 100%.

Group of orthologs #738. Best score 669 bits
Score difference with first non-orthologous sequence - C.intestinalis:669 G.gallus:416

F6SKI3              	100.00%		F1NCB2              	100.00%
                    	       		F1NEV4              	25.31%
                    	       		F1NZ79              	10.34%
Bootstrap support for F6SKI3 as seed ortholog is 100%.
Bootstrap support for F1NCB2 as seed ortholog is 100%.

Group of orthologs #739. Best score 669 bits
Score difference with first non-orthologous sequence - C.intestinalis:592 G.gallus:593

F6UMX9              	100.00%		E1C6P7              	100.00%
Bootstrap support for F6UMX9 as seed ortholog is 100%.
Bootstrap support for E1C6P7 as seed ortholog is 100%.

Group of orthologs #740. Best score 669 bits
Score difference with first non-orthologous sequence - C.intestinalis:669 G.gallus:669

F6USX3              	100.00%		Q5ZKG3              	100.00%
Bootstrap support for F6USX3 as seed ortholog is 100%.
Bootstrap support for Q5ZKG3 as seed ortholog is 100%.

Group of orthologs #741. Best score 669 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:138

Q4H2T5              	100.00%		P84023              	100.00%
Bootstrap support for Q4H2T5 as seed ortholog is 99%.
Bootstrap support for P84023 as seed ortholog is 99%.

Group of orthologs #742. Best score 668 bits
Score difference with first non-orthologous sequence - C.intestinalis:668 G.gallus:668

F6ZBI9              	100.00%		E1BT33              	100.00%
                    	       		F1N9D0              	11.48%
Bootstrap support for F6ZBI9 as seed ortholog is 100%.
Bootstrap support for E1BT33 as seed ortholog is 100%.

Group of orthologs #743. Best score 668 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 G.gallus:430

F6S8N9              	100.00%		F1NW57              	100.00%
Bootstrap support for F6S8N9 as seed ortholog is 100%.
Bootstrap support for F1NW57 as seed ortholog is 100%.

Group of orthologs #744. Best score 668 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 G.gallus:668

F6YWP5              	100.00%		Q5ZIF2              	100.00%
Bootstrap support for F6YWP5 as seed ortholog is 100%.
Bootstrap support for Q5ZIF2 as seed ortholog is 100%.

Group of orthologs #745. Best score 668 bits
Score difference with first non-orthologous sequence - C.intestinalis:668 G.gallus:264

H2XWZ3              	100.00%		Q5ZKM1              	100.00%
Bootstrap support for H2XWZ3 as seed ortholog is 100%.
Bootstrap support for Q5ZKM1 as seed ortholog is 80%.

Group of orthologs #746. Best score 667 bits
Score difference with first non-orthologous sequence - C.intestinalis:667 G.gallus:667

F6UQL0              	100.00%		F1NPF4              	100.00%
Bootstrap support for F6UQL0 as seed ortholog is 100%.
Bootstrap support for F1NPF4 as seed ortholog is 100%.

Group of orthologs #747. Best score 667 bits
Score difference with first non-orthologous sequence - C.intestinalis:602 G.gallus:667

F6WY47              	100.00%		F1NSH5              	100.00%
Bootstrap support for F6WY47 as seed ortholog is 100%.
Bootstrap support for F1NSH5 as seed ortholog is 100%.

Group of orthologs #748. Best score 666 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:306

F6PPA8              	100.00%		E1BQV2              	100.00%
                    	       		F1NRG0              	14.99%
Bootstrap support for F6PPA8 as seed ortholog is 100%.
Bootstrap support for E1BQV2 as seed ortholog is 100%.

Group of orthologs #749. Best score 666 bits
Score difference with first non-orthologous sequence - C.intestinalis:666 G.gallus:273

F6TTZ5              	100.00%		F1P284              	100.00%
Bootstrap support for F6TTZ5 as seed ortholog is 100%.
Bootstrap support for F1P284 as seed ortholog is 100%.

Group of orthologs #750. Best score 666 bits
Score difference with first non-orthologous sequence - C.intestinalis:666 G.gallus:666

F6PL95              	100.00%		Q5ZMW1              	100.00%
Bootstrap support for F6PL95 as seed ortholog is 100%.
Bootstrap support for Q5ZMW1 as seed ortholog is 100%.

Group of orthologs #751. Best score 666 bits
Score difference with first non-orthologous sequence - C.intestinalis:666 G.gallus:666

F6XCK4              	100.00%		F1P3F1              	100.00%
Bootstrap support for F6XCK4 as seed ortholog is 100%.
Bootstrap support for F1P3F1 as seed ortholog is 100%.

Group of orthologs #752. Best score 666 bits
Score difference with first non-orthologous sequence - C.intestinalis:601 G.gallus:666

H2Y107              	100.00%		F1NAG8              	100.00%
Bootstrap support for H2Y107 as seed ortholog is 100%.
Bootstrap support for F1NAG8 as seed ortholog is 100%.

Group of orthologs #753. Best score 665 bits
Score difference with first non-orthologous sequence - C.intestinalis:665 G.gallus:665

F6YT91              	100.00%		F1NCY5              	100.00%
                    	       		Q5ZMG1              	99.43%
Bootstrap support for F6YT91 as seed ortholog is 100%.
Bootstrap support for F1NCY5 as seed ortholog is 100%.

Group of orthologs #754. Best score 665 bits
Score difference with first non-orthologous sequence - C.intestinalis:665 G.gallus:665

F6TJ71              	100.00%		E1BRH0              	100.00%
Bootstrap support for F6TJ71 as seed ortholog is 100%.
Bootstrap support for E1BRH0 as seed ortholog is 100%.

Group of orthologs #755. Best score 665 bits
Score difference with first non-orthologous sequence - C.intestinalis:665 G.gallus:665

F6XMT2              	100.00%		F1NZ82              	100.00%
Bootstrap support for F6XMT2 as seed ortholog is 100%.
Bootstrap support for F1NZ82 as seed ortholog is 100%.

Group of orthologs #756. Best score 664 bits
Score difference with first non-orthologous sequence - C.intestinalis:664 G.gallus:664

H2XTT5              	100.00%		Q5F3L4              	100.00%
                    	       		F1NGG5              	77.78%
                    	       		F1P1F1              	12.78%
Bootstrap support for H2XTT5 as seed ortholog is 100%.
Bootstrap support for Q5F3L4 as seed ortholog is 100%.

Group of orthologs #757. Best score 664 bits
Score difference with first non-orthologous sequence - C.intestinalis:664 G.gallus:664

H2XJF4              	100.00%		E1BS67              	100.00%
Bootstrap support for H2XJF4 as seed ortholog is 100%.
Bootstrap support for E1BS67 as seed ortholog is 100%.

Group of orthologs #758. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 G.gallus:331

F6UHH9              	100.00%		E1C2R8              	100.00%
                    	       		F1NXI3              	100.00%
Bootstrap support for F6UHH9 as seed ortholog is 100%.
Bootstrap support for E1C2R8 as seed ortholog is 100%.
Bootstrap support for F1NXI3 as seed ortholog is 100%.

Group of orthologs #759. Best score 662 bits
Score difference with first non-orthologous sequence - C.intestinalis:662 G.gallus:424

F6Z6H7              	100.00%		F1NAR0              	100.00%
Bootstrap support for F6Z6H7 as seed ortholog is 100%.
Bootstrap support for F1NAR0 as seed ortholog is 100%.

Group of orthologs #760. Best score 661 bits
Score difference with first non-orthologous sequence - C.intestinalis:559 G.gallus:581

F7AMH0              	100.00%		F1NII4              	100.00%
Bootstrap support for F7AMH0 as seed ortholog is 100%.
Bootstrap support for F1NII4 as seed ortholog is 100%.

Group of orthologs #761. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 G.gallus:659

F6ZXH6              	100.00%		Q5F3U9              	100.00%
                    	       		Q5F3V3              	55.70%
Bootstrap support for F6ZXH6 as seed ortholog is 100%.
Bootstrap support for Q5F3U9 as seed ortholog is 100%.

Group of orthologs #762. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 G.gallus:659

F6ZGD4              	100.00%		E1BSK2              	100.00%
Bootstrap support for F6ZGD4 as seed ortholog is 100%.
Bootstrap support for E1BSK2 as seed ortholog is 100%.

Group of orthologs #763. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 G.gallus:659

F6U8B5              	100.00%		F1NB19              	100.00%
Bootstrap support for F6U8B5 as seed ortholog is 100%.
Bootstrap support for F1NB19 as seed ortholog is 100%.

Group of orthologs #764. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 G.gallus:659

F6YXX9              	100.00%		F1NIZ0              	100.00%
Bootstrap support for F6YXX9 as seed ortholog is 100%.
Bootstrap support for F1NIZ0 as seed ortholog is 100%.

Group of orthologs #765. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 G.gallus:659

Q1RLD5              	100.00%		Q5ZIG2              	100.00%
Bootstrap support for Q1RLD5 as seed ortholog is 100%.
Bootstrap support for Q5ZIG2 as seed ortholog is 100%.

Group of orthologs #766. Best score 658 bits
Score difference with first non-orthologous sequence - C.intestinalis:658 G.gallus:658

F6Q2F8              	100.00%		F1NPS8              	100.00%
Bootstrap support for F6Q2F8 as seed ortholog is 100%.
Bootstrap support for F1NPS8 as seed ortholog is 100%.

Group of orthologs #767. Best score 658 bits
Score difference with first non-orthologous sequence - C.intestinalis:658 G.gallus:658

F6Y677              	100.00%		E1C4G5              	100.00%
Bootstrap support for F6Y677 as seed ortholog is 100%.
Bootstrap support for E1C4G5 as seed ortholog is 100%.

Group of orthologs #768. Best score 658 bits
Score difference with first non-orthologous sequence - C.intestinalis:658 G.gallus:658

F7AER5              	100.00%		Q5ZHV2              	100.00%
Bootstrap support for F7AER5 as seed ortholog is 100%.
Bootstrap support for Q5ZHV2 as seed ortholog is 100%.

Group of orthologs #769. Best score 658 bits
Score difference with first non-orthologous sequence - C.intestinalis:658 G.gallus:658

H2XVM9              	100.00%		F1P1A8              	100.00%
Bootstrap support for H2XVM9 as seed ortholog is 100%.
Bootstrap support for F1P1A8 as seed ortholog is 100%.

Group of orthologs #770. Best score 657 bits
Score difference with first non-orthologous sequence - C.intestinalis:657 G.gallus:576

F6Y7R5              	100.00%		E1BRG3              	100.00%
Bootstrap support for F6Y7R5 as seed ortholog is 100%.
Bootstrap support for E1BRG3 as seed ortholog is 100%.

Group of orthologs #771. Best score 657 bits
Score difference with first non-orthologous sequence - C.intestinalis:657 G.gallus:587

F6SG33              	100.00%		F1NRQ6              	100.00%
Bootstrap support for F6SG33 as seed ortholog is 100%.
Bootstrap support for F1NRQ6 as seed ortholog is 100%.

Group of orthologs #772. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 G.gallus:656

F6QF10              	100.00%		F1P4G3              	100.00%
                    	       		E1BW82              	45.92%
                    	       		E1BUN6              	23.69%
Bootstrap support for F6QF10 as seed ortholog is 100%.
Bootstrap support for F1P4G3 as seed ortholog is 100%.

Group of orthologs #773. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 G.gallus:656

H2Y0G9              	100.00%		F1NH54              	100.00%
                    	       		E1C837              	35.51%
Bootstrap support for H2Y0G9 as seed ortholog is 100%.
Bootstrap support for F1NH54 as seed ortholog is 100%.

Group of orthologs #774. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 G.gallus:656

C4B8W8              	100.00%		E1BRT7              	100.00%
Bootstrap support for C4B8W8 as seed ortholog is 100%.
Bootstrap support for E1BRT7 as seed ortholog is 100%.

Group of orthologs #775. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 G.gallus:386

F7BEA7              	100.00%		Q1PRL4              	100.00%
Bootstrap support for F7BEA7 as seed ortholog is 100%.
Bootstrap support for Q1PRL4 as seed ortholog is 100%.

Group of orthologs #776. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 G.gallus:449

F7B898              	100.00%		Q5ZKB9              	100.00%
Bootstrap support for F7B898 as seed ortholog is 100%.
Bootstrap support for Q5ZKB9 as seed ortholog is 100%.

Group of orthologs #777. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:523 G.gallus:72

Q8T3S5              	100.00%		P21868              	100.00%
Bootstrap support for Q8T3S5 as seed ortholog is 100%.
Bootstrap support for P21868 as seed ortholog is 99%.

Group of orthologs #778. Best score 655 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 G.gallus:288

F6YPX6              	100.00%		F1NB25              	100.00%
                    	       		F1NIN1              	56.07%
                    	       		E1BQF2              	53.27%
Bootstrap support for F6YPX6 as seed ortholog is 100%.
Bootstrap support for F1NB25 as seed ortholog is 100%.

Group of orthologs #779. Best score 655 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 G.gallus:655

F6QFH5              	100.00%		F1NPG2              	100.00%
Bootstrap support for F6QFH5 as seed ortholog is 99%.
Bootstrap support for F1NPG2 as seed ortholog is 100%.

Group of orthologs #780. Best score 655 bits
Score difference with first non-orthologous sequence - C.intestinalis:655 G.gallus:655

F7ABK2              	100.00%		E1C0E8              	100.00%
Bootstrap support for F7ABK2 as seed ortholog is 100%.
Bootstrap support for E1C0E8 as seed ortholog is 100%.

Group of orthologs #781. Best score 654 bits
Score difference with first non-orthologous sequence - C.intestinalis:654 G.gallus:528

H2XVK2              	100.00%		F1NNL5              	100.00%
H2XQD5              	36.71%		F1NHR1              	28.45%
Bootstrap support for H2XVK2 as seed ortholog is 100%.
Bootstrap support for F1NNL5 as seed ortholog is 100%.

Group of orthologs #782. Best score 654 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 G.gallus:229

F6QWQ4              	100.00%		F1NAX5              	100.00%
Bootstrap support for F6QWQ4 as seed ortholog is 100%.
Bootstrap support for F1NAX5 as seed ortholog is 100%.

Group of orthologs #783. Best score 654 bits
Score difference with first non-orthologous sequence - C.intestinalis:654 G.gallus:531

Q1RLA7              	100.00%		F1NSB6              	100.00%
Bootstrap support for Q1RLA7 as seed ortholog is 100%.
Bootstrap support for F1NSB6 as seed ortholog is 100%.

Group of orthologs #784. Best score 653 bits
Score difference with first non-orthologous sequence - C.intestinalis:653 G.gallus:136

H2XYU1              	100.00%		E1C8U8              	100.00%
                    	       		H9L2H3              	14.90%
Bootstrap support for H2XYU1 as seed ortholog is 100%.
Bootstrap support for E1C8U8 as seed ortholog is 96%.

Group of orthologs #785. Best score 653 bits
Score difference with first non-orthologous sequence - C.intestinalis:653 G.gallus:188

H2XYE1              	100.00%		P07997              	100.00%
                    	       		E1C3L6              	76.37%
Bootstrap support for H2XYE1 as seed ortholog is 100%.
Bootstrap support for P07997 as seed ortholog is 100%.

Group of orthologs #786. Best score 653 bits
Score difference with first non-orthologous sequence - C.intestinalis:653 G.gallus:580

F6YC60              	100.00%		E1BWQ7              	100.00%
Bootstrap support for F6YC60 as seed ortholog is 100%.
Bootstrap support for E1BWQ7 as seed ortholog is 100%.

Group of orthologs #787. Best score 653 bits
Score difference with first non-orthologous sequence - C.intestinalis:653 G.gallus:653

Q1RLG4              	100.00%		F1NGP4              	100.00%
Bootstrap support for Q1RLG4 as seed ortholog is 100%.
Bootstrap support for F1NGP4 as seed ortholog is 100%.

Group of orthologs #788. Best score 652 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 G.gallus:251

F6XG08              	100.00%		Q9YI58              	100.00%
                    	       		F1NS42              	23.84%
Bootstrap support for F6XG08 as seed ortholog is 100%.
Bootstrap support for Q9YI58 as seed ortholog is 100%.

Group of orthologs #789. Best score 652 bits
Score difference with first non-orthologous sequence - C.intestinalis:652 G.gallus:374

F6ZRQ5              	100.00%		E1BUZ4              	100.00%
Bootstrap support for F6ZRQ5 as seed ortholog is 100%.
Bootstrap support for E1BUZ4 as seed ortholog is 100%.

Group of orthologs #790. Best score 651 bits
Score difference with first non-orthologous sequence - C.intestinalis:651 G.gallus:524

F6RCR9              	100.00%		F1NLY6              	100.00%
                    	       		E1C811              	24.19%
Bootstrap support for F6RCR9 as seed ortholog is 100%.
Bootstrap support for F1NLY6 as seed ortholog is 100%.

Group of orthologs #791. Best score 651 bits
Score difference with first non-orthologous sequence - C.intestinalis:651 G.gallus:651

F6THM1              	100.00%		E1C220              	100.00%
Bootstrap support for F6THM1 as seed ortholog is 100%.
Bootstrap support for E1C220 as seed ortholog is 100%.

Group of orthologs #792. Best score 650 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 G.gallus:503

F6XI84              	100.00%		E1C427              	100.00%
Bootstrap support for F6XI84 as seed ortholog is 100%.
Bootstrap support for E1C427 as seed ortholog is 100%.

Group of orthologs #793. Best score 650 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 G.gallus:142

F6ZXE7              	100.00%		F1P3C3              	100.00%
Bootstrap support for F6ZXE7 as seed ortholog is 100%.
Bootstrap support for F1P3C3 as seed ortholog is 99%.

Group of orthologs #794. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 G.gallus:295

F6TJJ7              	100.00%		F1NCX7              	100.00%
Bootstrap support for F6TJJ7 as seed ortholog is 100%.
Bootstrap support for F1NCX7 as seed ortholog is 100%.

Group of orthologs #795. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:649 G.gallus:649

F6X7U3              	100.00%		F1NQF9              	100.00%
Bootstrap support for F6X7U3 as seed ortholog is 100%.
Bootstrap support for F1NQF9 as seed ortholog is 100%.

Group of orthologs #796. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:649 G.gallus:649

F6ZWS5              	100.00%		F1NIK6              	100.00%
Bootstrap support for F6ZWS5 as seed ortholog is 100%.
Bootstrap support for F1NIK6 as seed ortholog is 100%.

Group of orthologs #797. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:649 G.gallus:649

F6T6E4              	100.00%		Q5ZIC8              	100.00%
Bootstrap support for F6T6E4 as seed ortholog is 100%.
Bootstrap support for Q5ZIC8 as seed ortholog is 100%.

Group of orthologs #798. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:649 G.gallus:649

F6WCM9              	100.00%		Q5ZMR9              	100.00%
Bootstrap support for F6WCM9 as seed ortholog is 100%.
Bootstrap support for Q5ZMR9 as seed ortholog is 100%.

Group of orthologs #799. Best score 648 bits
Score difference with first non-orthologous sequence - C.intestinalis:459 G.gallus:316

F6S4F7              	100.00%		F1NMS0              	100.00%
                    	       		F1NRC8              	48.82%
Bootstrap support for F6S4F7 as seed ortholog is 100%.
Bootstrap support for F1NMS0 as seed ortholog is 100%.

Group of orthologs #800. Best score 648 bits
Score difference with first non-orthologous sequence - C.intestinalis:648 G.gallus:433

F7AYN4              	100.00%		Q5ZI55              	100.00%
Bootstrap support for F7AYN4 as seed ortholog is 100%.
Bootstrap support for Q5ZI55 as seed ortholog is 100%.

Group of orthologs #801. Best score 647 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 G.gallus:404

F6W6K0              	100.00%		E1C550              	100.00%
Bootstrap support for F6W6K0 as seed ortholog is 100%.
Bootstrap support for E1C550 as seed ortholog is 100%.

Group of orthologs #802. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 G.gallus:646

F6XZ93              	100.00%		P51913              	100.00%
                    	       		O57391              	54.13%
                    	       		P07322              	35.32%
Bootstrap support for F6XZ93 as seed ortholog is 100%.
Bootstrap support for P51913 as seed ortholog is 100%.

Group of orthologs #803. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:411

F6Q0M2              	100.00%		E1C8Z7              	100.00%
                    	       		F1P1V1              	36.39%
Bootstrap support for F6Q0M2 as seed ortholog is 100%.
Bootstrap support for E1C8Z7 as seed ortholog is 100%.

Group of orthologs #804. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 G.gallus:646

H2XJK0              	100.00%		F1NKG9              	100.00%
                    	       		F1NL95              	12.58%
Bootstrap support for H2XJK0 as seed ortholog is 100%.
Bootstrap support for F1NKG9 as seed ortholog is 100%.

Group of orthologs #805. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 G.gallus:646

H2XZU8              	100.00%		E1BZ70              	100.00%
Bootstrap support for H2XZU8 as seed ortholog is 100%.
Bootstrap support for E1BZ70 as seed ortholog is 100%.

Group of orthologs #806. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 G.gallus:646

F6Z0E0              	100.00%		Q5ZIT1              	100.00%
Bootstrap support for F6Z0E0 as seed ortholog is 100%.
Bootstrap support for Q5ZIT1 as seed ortholog is 100%.

Group of orthologs #807. Best score 645 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 G.gallus:286

F6PSM8              	100.00%		E1C3U7              	100.00%
                    	       		H9KZZ3              	15.28%
Bootstrap support for F6PSM8 as seed ortholog is 100%.
Bootstrap support for E1C3U7 as seed ortholog is 100%.

Group of orthologs #808. Best score 644 bits
Score difference with first non-orthologous sequence - C.intestinalis:644 G.gallus:376

F6WPA9              	100.00%		E1BQ59              	100.00%
                    	       		H9KZ75              	19.03%
                    	       		F1NEZ1              	11.10%
Bootstrap support for F6WPA9 as seed ortholog is 100%.
Bootstrap support for E1BQ59 as seed ortholog is 100%.

Group of orthologs #809. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:643 G.gallus:643

F6UJ17              	100.00%		F1NC57              	100.00%
                    	       		F1NMI2              	10.36%
Bootstrap support for F6UJ17 as seed ortholog is 100%.
Bootstrap support for F1NC57 as seed ortholog is 100%.

Group of orthologs #810. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:643 G.gallus:643

F6Q2Q3              	100.00%		E1C9F1              	100.00%
Bootstrap support for F6Q2Q3 as seed ortholog is 100%.
Bootstrap support for E1C9F1 as seed ortholog is 100%.

Group of orthologs #811. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:643 G.gallus:643

F7A912              	100.00%		E1C0G5              	100.00%
Bootstrap support for F7A912 as seed ortholog is 100%.
Bootstrap support for E1C0G5 as seed ortholog is 100%.

Group of orthologs #812. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 G.gallus:146

F6XCC4              	100.00%		F1NLR5              	100.00%
Bootstrap support for F6XCC4 as seed ortholog is 87%.
Bootstrap support for F1NLR5 as seed ortholog is 99%.

Group of orthologs #813. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:643 G.gallus:643

F6SZ37              	100.00%		H9L0K1              	100.00%
Bootstrap support for F6SZ37 as seed ortholog is 100%.
Bootstrap support for H9L0K1 as seed ortholog is 100%.

Group of orthologs #814. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:643 G.gallus:643

F6U441              	100.00%		F1P5T1              	100.00%
Bootstrap support for F6U441 as seed ortholog is 100%.
Bootstrap support for F1P5T1 as seed ortholog is 100%.

Group of orthologs #815. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:643 G.gallus:643

H2XU13              	100.00%		P23007              	100.00%
Bootstrap support for H2XU13 as seed ortholog is 100%.
Bootstrap support for P23007 as seed ortholog is 100%.

Group of orthologs #816. Best score 641 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 G.gallus:208

F6TGD6              	100.00%		F1NLS1              	100.00%
                    	       		E1BZ32              	32.15%
Bootstrap support for F6TGD6 as seed ortholog is 66%.
Alternative seed ortholog is F6TDB0 (40 bits away from this cluster)
Bootstrap support for F1NLS1 as seed ortholog is 99%.

Group of orthologs #817. Best score 641 bits
Score difference with first non-orthologous sequence - C.intestinalis:641 G.gallus:641

F6VNH8              	100.00%		Q04861              	100.00%
Bootstrap support for F6VNH8 as seed ortholog is 100%.
Bootstrap support for Q04861 as seed ortholog is 100%.

Group of orthologs #818. Best score 641 bits
Score difference with first non-orthologous sequence - C.intestinalis:526 G.gallus:534

H2XLI2              	100.00%		Q9PTR5              	100.00%
Bootstrap support for H2XLI2 as seed ortholog is 100%.
Bootstrap support for Q9PTR5 as seed ortholog is 100%.

Group of orthologs #819. Best score 640 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 G.gallus:91

F6XNT2              	100.00%		E1BQA5              	100.00%
                    	       		F1NKY6              	32.82%
                    	       		E1BQ84              	20.57%
Bootstrap support for F6XNT2 as seed ortholog is 77%.
Bootstrap support for E1BQA5 as seed ortholog is 98%.

Group of orthologs #820. Best score 640 bits
Score difference with first non-orthologous sequence - C.intestinalis:640 G.gallus:640

F7B7H5              	100.00%		F1NGJ7              	100.00%
Bootstrap support for F7B7H5 as seed ortholog is 100%.
Bootstrap support for F1NGJ7 as seed ortholog is 100%.

Group of orthologs #821. Best score 639 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 G.gallus:489

F6W6I5              	100.00%		Q5ZKI0              	100.00%
                    	       		E1BZ86              	66.57%
                    	       		F1NGS8              	48.39%
Bootstrap support for F6W6I5 as seed ortholog is 100%.
Bootstrap support for Q5ZKI0 as seed ortholog is 100%.

Group of orthologs #822. Best score 639 bits
Score difference with first non-orthologous sequence - C.intestinalis:639 G.gallus:639

F6QY24              	100.00%		Q5ZL57              	100.00%
Bootstrap support for F6QY24 as seed ortholog is 100%.
Bootstrap support for Q5ZL57 as seed ortholog is 100%.

Group of orthologs #823. Best score 639 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 G.gallus:458

Q9NL43              	100.00%		F1NPL8              	100.00%
Bootstrap support for Q9NL43 as seed ortholog is 100%.
Bootstrap support for F1NPL8 as seed ortholog is 100%.

Group of orthologs #824. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:638 G.gallus:83

F6V5P8              	100.00%		F1P0X3              	100.00%
                    	       		F1NLQ9              	34.42%
                    	       		F1NIL0              	28.84%
Bootstrap support for F6V5P8 as seed ortholog is 100%.
Bootstrap support for F1P0X3 as seed ortholog is 99%.

Group of orthologs #825. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:638 G.gallus:638

C4B8X4              	100.00%		E1BXJ4              	100.00%
Bootstrap support for C4B8X4 as seed ortholog is 100%.
Bootstrap support for E1BXJ4 as seed ortholog is 100%.

Group of orthologs #826. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:638 G.gallus:638

H2XT62              	100.00%		E1C497              	100.00%
Bootstrap support for H2XT62 as seed ortholog is 100%.
Bootstrap support for E1C497 as seed ortholog is 100%.

Group of orthologs #827. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:638 G.gallus:638

F6S8S3              	100.00%		Q5F428              	100.00%
Bootstrap support for F6S8S3 as seed ortholog is 100%.
Bootstrap support for Q5F428 as seed ortholog is 100%.

Group of orthologs #828. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:638 G.gallus:638

F6SID0              	100.00%		Q5ZLA5              	100.00%
Bootstrap support for F6SID0 as seed ortholog is 100%.
Bootstrap support for Q5ZLA5 as seed ortholog is 100%.

Group of orthologs #829. Best score 638 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 G.gallus:456

F6TMJ9              	100.00%		Q8JFP1              	100.00%
Bootstrap support for F6TMJ9 as seed ortholog is 100%.
Bootstrap support for Q8JFP1 as seed ortholog is 100%.

Group of orthologs #830. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:637 G.gallus:637

F6PKW3              	100.00%		E1C1D3              	100.00%
                    	       		F1NXT2              	7.62%
Bootstrap support for F6PKW3 as seed ortholog is 100%.
Bootstrap support for E1C1D3 as seed ortholog is 100%.

Group of orthologs #831. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:637 G.gallus:637

F7A0P7              	100.00%		E1C3U2              	100.00%
                    	       		F1P396              	48.24%
Bootstrap support for F7A0P7 as seed ortholog is 100%.
Bootstrap support for E1C3U2 as seed ortholog is 100%.

Group of orthologs #832. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:637 G.gallus:637

F6Y5C7              	100.00%		E1C3Y2              	100.00%
Bootstrap support for F6Y5C7 as seed ortholog is 100%.
Bootstrap support for E1C3Y2 as seed ortholog is 100%.

Group of orthologs #833. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:637 G.gallus:637

H2Y2K4              	100.00%		E1C420              	100.00%
Bootstrap support for H2Y2K4 as seed ortholog is 100%.
Bootstrap support for E1C420 as seed ortholog is 100%.

Group of orthologs #834. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:637 G.gallus:637

F7BIS1              	100.00%		H9L3I7              	100.00%
Bootstrap support for F7BIS1 as seed ortholog is 100%.
Bootstrap support for H9L3I7 as seed ortholog is 100%.

Group of orthologs #835. Best score 636 bits
Score difference with first non-orthologous sequence - C.intestinalis:636 G.gallus:555

F6WAY8              	100.00%		E1C5L3              	100.00%
                    	       		E1C678              	53.31%
Bootstrap support for F6WAY8 as seed ortholog is 100%.
Bootstrap support for E1C5L3 as seed ortholog is 100%.

Group of orthologs #836. Best score 636 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 G.gallus:636

F6WBG2              	100.00%		Q66PG4              	100.00%
                    	       		Q66PG3              	52.61%
Bootstrap support for F6WBG2 as seed ortholog is 100%.
Bootstrap support for Q66PG4 as seed ortholog is 100%.

Group of orthologs #837. Best score 636 bits
Score difference with first non-orthologous sequence - C.intestinalis:636 G.gallus:636

F6SVI8              	100.00%		E1BRP4              	100.00%
Bootstrap support for F6SVI8 as seed ortholog is 100%.
Bootstrap support for E1BRP4 as seed ortholog is 100%.

Group of orthologs #838. Best score 636 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 G.gallus:636

F7A5V7              	100.00%		E1BVN5              	100.00%
Bootstrap support for F7A5V7 as seed ortholog is 100%.
Bootstrap support for E1BVN5 as seed ortholog is 100%.

Group of orthologs #839. Best score 636 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 G.gallus:636

F7BBT3              	100.00%		E1BW59              	100.00%
Bootstrap support for F7BBT3 as seed ortholog is 100%.
Bootstrap support for E1BW59 as seed ortholog is 100%.

Group of orthologs #840. Best score 636 bits
Score difference with first non-orthologous sequence - C.intestinalis:636 G.gallus:636

F6WUM1              	100.00%		Q5ZIW5              	100.00%
Bootstrap support for F6WUM1 as seed ortholog is 100%.
Bootstrap support for Q5ZIW5 as seed ortholog is 100%.

Group of orthologs #841. Best score 636 bits
Score difference with first non-orthologous sequence - C.intestinalis:636 G.gallus:636

H2Y3N1              	100.00%		F1P2A2              	100.00%
Bootstrap support for H2Y3N1 as seed ortholog is 100%.
Bootstrap support for F1P2A2 as seed ortholog is 100%.

Group of orthologs #842. Best score 635 bits
Score difference with first non-orthologous sequence - C.intestinalis:635 G.gallus:635

F6Y3K6              	100.00%		E1C6K2              	100.00%
Bootstrap support for F6Y3K6 as seed ortholog is 100%.
Bootstrap support for E1C6K2 as seed ortholog is 100%.

Group of orthologs #843. Best score 635 bits
Score difference with first non-orthologous sequence - C.intestinalis:635 G.gallus:635

F7ADW3              	100.00%		F1NTU7              	100.00%
Bootstrap support for F7ADW3 as seed ortholog is 100%.
Bootstrap support for F1NTU7 as seed ortholog is 100%.

Group of orthologs #844. Best score 635 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 G.gallus:635

H2XLM6              	100.00%		F1NSZ4              	100.00%
Bootstrap support for H2XLM6 as seed ortholog is 100%.
Bootstrap support for F1NSZ4 as seed ortholog is 100%.

Group of orthologs #845. Best score 634 bits
Score difference with first non-orthologous sequence - C.intestinalis:634 G.gallus:634

F7BNL5              	100.00%		E1BRF7              	100.00%
                    	       		E1BZH8              	50.04%
Bootstrap support for F7BNL5 as seed ortholog is 100%.
Bootstrap support for E1BRF7 as seed ortholog is 100%.

Group of orthologs #846. Best score 634 bits
Score difference with first non-orthologous sequence - C.intestinalis:634 G.gallus:168

H2XT39              	100.00%		E1BZ49              	100.00%
Bootstrap support for H2XT39 as seed ortholog is 100%.
Bootstrap support for E1BZ49 as seed ortholog is 99%.

Group of orthologs #847. Best score 633 bits
Score difference with first non-orthologous sequence - C.intestinalis:633 G.gallus:633

F6YX67              	100.00%		E1BT61              	100.00%
                    	       		F1P4G8              	23.20%
Bootstrap support for F6YX67 as seed ortholog is 100%.
Bootstrap support for E1BT61 as seed ortholog is 100%.

Group of orthologs #848. Best score 632 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 G.gallus:566

F6SDI7              	100.00%		Q5ZLL1              	100.00%
                    	       		E1BVV7              	35.68%
Bootstrap support for F6SDI7 as seed ortholog is 100%.
Bootstrap support for Q5ZLL1 as seed ortholog is 100%.

Group of orthologs #849. Best score 632 bits
Score difference with first non-orthologous sequence - C.intestinalis:632 G.gallus:632

H2XQ25              	100.00%		F1NZB4              	100.00%
                    	       		H9L073              	27.87%
Bootstrap support for H2XQ25 as seed ortholog is 100%.
Bootstrap support for F1NZB4 as seed ortholog is 100%.

Group of orthologs #850. Best score 632 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 G.gallus:632

F6VL61              	100.00%		Q5ZJU3              	100.00%
Bootstrap support for F6VL61 as seed ortholog is 100%.
Bootstrap support for Q5ZJU3 as seed ortholog is 100%.

Group of orthologs #851. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 G.gallus:631

F6YPY1              	100.00%		E1BYB2              	100.00%
Bootstrap support for F6YPY1 as seed ortholog is 100%.
Bootstrap support for E1BYB2 as seed ortholog is 100%.

Group of orthologs #852. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 G.gallus:631

F6XBA5              	100.00%		F1N9P1              	100.00%
Bootstrap support for F6XBA5 as seed ortholog is 100%.
Bootstrap support for F1N9P1 as seed ortholog is 100%.

Group of orthologs #853. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:406

F6YKT9              	100.00%		F1N8C3              	100.00%
Bootstrap support for F6YKT9 as seed ortholog is 99%.
Bootstrap support for F1N8C3 as seed ortholog is 100%.

Group of orthologs #854. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:631 G.gallus:631

F6WY01              	100.00%		Q5ZKV9              	100.00%
Bootstrap support for F6WY01 as seed ortholog is 100%.
Bootstrap support for Q5ZKV9 as seed ortholog is 100%.

Group of orthologs #855. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:630 G.gallus:630

F6X882              	100.00%		Q5ZIX8              	100.00%
                    	       		F1NJZ2              	22.34%
Bootstrap support for F6X882 as seed ortholog is 100%.
Bootstrap support for Q5ZIX8 as seed ortholog is 100%.

Group of orthologs #856. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:630 G.gallus:630

F6VVR6              	100.00%		E1BVP8              	100.00%
Bootstrap support for F6VVR6 as seed ortholog is 100%.
Bootstrap support for E1BVP8 as seed ortholog is 100%.

Group of orthologs #857. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:630

H2XUG5              	100.00%		Q9PW38              	100.00%
Bootstrap support for H2XUG5 as seed ortholog is 100%.
Bootstrap support for Q9PW38 as seed ortholog is 100%.

Group of orthologs #858. Best score 629 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 G.gallus:191

F6XLF0              	100.00%		E1BQG4              	100.00%
                    	       		F1P1Z9              	40.10%
                    	       		Q5ZKL2              	33.79%
Bootstrap support for F6XLF0 as seed ortholog is 100%.
Bootstrap support for E1BQG4 as seed ortholog is 100%.

Group of orthologs #859. Best score 628 bits
Score difference with first non-orthologous sequence - C.intestinalis:628 G.gallus:511

F6UGF1              	100.00%		F1NBD9              	100.00%
                    	       		E1BUG0              	6.06%
Bootstrap support for F6UGF1 as seed ortholog is 100%.
Bootstrap support for F1NBD9 as seed ortholog is 100%.

Group of orthologs #860. Best score 626 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:105

F6WX88              	100.00%		F1NPI1              	100.00%
                    	       		F1NPI2              	18.84%
Bootstrap support for F6WX88 as seed ortholog is 98%.
Bootstrap support for F1NPI1 as seed ortholog is 98%.

Group of orthologs #861. Best score 626 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 G.gallus:106

F6YFU4              	100.00%		F1P4Q0              	100.00%
F6YFZ5              	14.10%		
Bootstrap support for F6YFU4 as seed ortholog is 100%.
Bootstrap support for F1P4Q0 as seed ortholog is 99%.

Group of orthologs #862. Best score 626 bits
Score difference with first non-orthologous sequence - C.intestinalis:626 G.gallus:626

F6XA93              	100.00%		F1NUZ3              	100.00%
Bootstrap support for F6XA93 as seed ortholog is 100%.
Bootstrap support for F1NUZ3 as seed ortholog is 100%.

Group of orthologs #863. Best score 626 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 G.gallus:151

F7AU99              	100.00%		Q90611              	100.00%
Bootstrap support for F7AU99 as seed ortholog is 100%.
Bootstrap support for Q90611 as seed ortholog is 99%.

Group of orthologs #864. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:565 G.gallus:625

F6TSN4              	100.00%		F1NEG5              	100.00%
                    	       		F1NVK8              	46.82%
                    	       		E1BZR0              	42.71%
Bootstrap support for F6TSN4 as seed ortholog is 100%.
Bootstrap support for F1NEG5 as seed ortholog is 100%.

Group of orthologs #865. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 G.gallus:460

F6R6X6              	100.00%		E1BXM6              	100.00%
                    	       		E1C256              	29.04%
Bootstrap support for F6R6X6 as seed ortholog is 100%.
Bootstrap support for E1BXM6 as seed ortholog is 100%.

Group of orthologs #866. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:625 G.gallus:625

F7AHM4              	100.00%		E1BWM7              	100.00%
Bootstrap support for F7AHM4 as seed ortholog is 100%.
Bootstrap support for E1BWM7 as seed ortholog is 100%.

Group of orthologs #867. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:625 G.gallus:327

F7A4T6              	100.00%		E1C372              	100.00%
Bootstrap support for F7A4T6 as seed ortholog is 100%.
Bootstrap support for E1C372 as seed ortholog is 100%.

Group of orthologs #868. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 G.gallus:430

F6W1F7              	100.00%		Q5ZJK4              	100.00%
Bootstrap support for F6W1F7 as seed ortholog is 100%.
Bootstrap support for Q5ZJK4 as seed ortholog is 100%.

Group of orthologs #869. Best score 625 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 G.gallus:426

F7AA42              	100.00%		Q5ZLB0              	100.00%
Bootstrap support for F7AA42 as seed ortholog is 100%.
Bootstrap support for Q5ZLB0 as seed ortholog is 100%.

Group of orthologs #870. Best score 624 bits
Score difference with first non-orthologous sequence - C.intestinalis:624 G.gallus:624

F6QX56              	100.00%		F1NIQ9              	100.00%
Bootstrap support for F6QX56 as seed ortholog is 100%.
Bootstrap support for F1NIQ9 as seed ortholog is 100%.

Group of orthologs #871. Best score 624 bits
Score difference with first non-orthologous sequence - C.intestinalis:624 G.gallus:624

F7BDH1              	100.00%		F1NKK1              	100.00%
Bootstrap support for F7BDH1 as seed ortholog is 100%.
Bootstrap support for F1NKK1 as seed ortholog is 100%.

Group of orthologs #872. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:116

H2XV07              	100.00%		F1NG92              	100.00%
H2XL32              	27.93%		
F6UPM0              	24.13%		
Bootstrap support for H2XV07 as seed ortholog is 99%.
Bootstrap support for F1NG92 as seed ortholog is 99%.

Group of orthologs #873. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:623 G.gallus:623

F6QBM2              	100.00%		E1C0C3              	100.00%
Bootstrap support for F6QBM2 as seed ortholog is 100%.
Bootstrap support for E1C0C3 as seed ortholog is 100%.

Group of orthologs #874. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 G.gallus:463

F6XKP0              	100.00%		F1P3L9              	100.00%
Bootstrap support for F6XKP0 as seed ortholog is 100%.
Bootstrap support for F1P3L9 as seed ortholog is 100%.

Group of orthologs #875. Best score 622 bits
Score difference with first non-orthologous sequence - C.intestinalis:622 G.gallus:622

F6R8L5              	100.00%		E1C6X2              	100.00%
Bootstrap support for F6R8L5 as seed ortholog is 100%.
Bootstrap support for E1C6X2 as seed ortholog is 100%.

Group of orthologs #876. Best score 622 bits
Score difference with first non-orthologous sequence - C.intestinalis:519 G.gallus:553

F6TB77              	100.00%		F1N880              	100.00%
Bootstrap support for F6TB77 as seed ortholog is 100%.
Bootstrap support for F1N880 as seed ortholog is 100%.

Group of orthologs #877. Best score 622 bits
Score difference with first non-orthologous sequence - C.intestinalis:622 G.gallus:622

F6SYF4              	100.00%		F1NMD8              	100.00%
Bootstrap support for F6SYF4 as seed ortholog is 100%.
Bootstrap support for F1NMD8 as seed ortholog is 100%.

Group of orthologs #878. Best score 622 bits
Score difference with first non-orthologous sequence - C.intestinalis:622 G.gallus:622

F7B890              	100.00%		E1C5K4              	100.00%
Bootstrap support for F7B890 as seed ortholog is 100%.
Bootstrap support for E1C5K4 as seed ortholog is 100%.

Group of orthologs #879. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:621 G.gallus:621

F6ZTE7              	100.00%		E1BRB1              	100.00%
Bootstrap support for F6ZTE7 as seed ortholog is 100%.
Bootstrap support for E1BRB1 as seed ortholog is 100%.

Group of orthologs #880. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 G.gallus:349

F6UJS3              	100.00%		F1NAD2              	100.00%
Bootstrap support for F6UJS3 as seed ortholog is 100%.
Bootstrap support for F1NAD2 as seed ortholog is 100%.

Group of orthologs #881. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:621 G.gallus:621

F6YFB9              	100.00%		E1C8S3              	100.00%
Bootstrap support for F6YFB9 as seed ortholog is 100%.
Bootstrap support for E1C8S3 as seed ortholog is 100%.

Group of orthologs #882. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:621 G.gallus:408

F6XQD4              	100.00%		F1NQJ2              	100.00%
Bootstrap support for F6XQD4 as seed ortholog is 100%.
Bootstrap support for F1NQJ2 as seed ortholog is 100%.

Group of orthologs #883. Best score 620 bits
Score difference with first non-orthologous sequence - C.intestinalis:620 G.gallus:620

H2XRU0              	100.00%		E1BUN2              	100.00%
Bootstrap support for H2XRU0 as seed ortholog is 100%.
Bootstrap support for E1BUN2 as seed ortholog is 100%.

Group of orthologs #884. Best score 620 bits
Score difference with first non-orthologous sequence - C.intestinalis:620 G.gallus:620

F6XKA2              	100.00%		Q5ZLV4              	100.00%
Bootstrap support for F6XKA2 as seed ortholog is 100%.
Bootstrap support for Q5ZLV4 as seed ortholog is 100%.

Group of orthologs #885. Best score 620 bits
Score difference with first non-orthologous sequence - C.intestinalis:620 G.gallus:620

F7A5Y1              	100.00%		Q07598              	100.00%
Bootstrap support for F7A5Y1 as seed ortholog is 100%.
Bootstrap support for Q07598 as seed ortholog is 100%.

Group of orthologs #886. Best score 619 bits
Score difference with first non-orthologous sequence - C.intestinalis:619 G.gallus:619

F6YN13              	100.00%		E1C6U7              	100.00%
                    	       		F1P2B8              	44.85%
Bootstrap support for F6YN13 as seed ortholog is 100%.
Bootstrap support for E1C6U7 as seed ortholog is 100%.

Group of orthologs #887. Best score 619 bits
Score difference with first non-orthologous sequence - C.intestinalis:619 G.gallus:619

H2XYY6              	100.00%		F1NAE0              	100.00%
Bootstrap support for H2XYY6 as seed ortholog is 100%.
Bootstrap support for F1NAE0 as seed ortholog is 100%.

Group of orthologs #888. Best score 618 bits
Score difference with first non-orthologous sequence - C.intestinalis:618 G.gallus:242

H2Y169              	100.00%		F1NIP9              	100.00%
Bootstrap support for H2Y169 as seed ortholog is 100%.
Bootstrap support for F1NIP9 as seed ortholog is 100%.

Group of orthologs #889. Best score 617 bits
Score difference with first non-orthologous sequence - C.intestinalis:617 G.gallus:456

H2XM91              	100.00%		F1NV31              	100.00%
Bootstrap support for H2XM91 as seed ortholog is 100%.
Bootstrap support for F1NV31 as seed ortholog is 100%.

Group of orthologs #890. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 G.gallus:148

F6SSQ7              	100.00%		F1NEL5              	100.00%
Bootstrap support for F6SSQ7 as seed ortholog is 100%.
Bootstrap support for F1NEL5 as seed ortholog is 99%.

Group of orthologs #891. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 G.gallus:566

H2XLN0              	100.00%		E1BVA6              	100.00%
Bootstrap support for H2XLN0 as seed ortholog is 100%.
Bootstrap support for E1BVA6 as seed ortholog is 100%.

Group of orthologs #892. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:616 G.gallus:616

F6U9S8              	100.00%		F1NYQ3              	100.00%
Bootstrap support for F6U9S8 as seed ortholog is 100%.
Bootstrap support for F1NYQ3 as seed ortholog is 100%.

Group of orthologs #893. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 G.gallus:616

H2XZG0              	100.00%		F1NEC5              	100.00%
Bootstrap support for H2XZG0 as seed ortholog is 100%.
Bootstrap support for F1NEC5 as seed ortholog is 100%.

Group of orthologs #894. Best score 615 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 G.gallus:615

F7ASD2              	100.00%		E1C6M2              	100.00%
Bootstrap support for F7ASD2 as seed ortholog is 100%.
Bootstrap support for E1C6M2 as seed ortholog is 100%.

Group of orthologs #895. Best score 614 bits
Score difference with first non-orthologous sequence - C.intestinalis:614 G.gallus:53

F6PNS6              	100.00%		E1C735              	100.00%
Bootstrap support for F6PNS6 as seed ortholog is 100%.
Bootstrap support for E1C735 as seed ortholog is 96%.

Group of orthologs #896. Best score 614 bits
Score difference with first non-orthologous sequence - C.intestinalis:614 G.gallus:614

F6W1L1              	100.00%		F1NX13              	100.00%
Bootstrap support for F6W1L1 as seed ortholog is 100%.
Bootstrap support for F1NX13 as seed ortholog is 100%.

Group of orthologs #897. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:613 G.gallus:428

F6VAT4              	100.00%		F1NTW0              	100.00%
                    	       		F1NVG4              	13.91%
                    	       		F1NEJ0              	10.21%
Bootstrap support for F6VAT4 as seed ortholog is 100%.
Bootstrap support for F1NTW0 as seed ortholog is 100%.

Group of orthologs #898. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 G.gallus:613

F6YMX2              	100.00%		E1BVG2              	100.00%
                    	       		E1BVH5              	45.40%
Bootstrap support for F6YMX2 as seed ortholog is 100%.
Bootstrap support for E1BVG2 as seed ortholog is 100%.

Group of orthologs #899. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 G.gallus:12

F6Q5E4              	100.00%		Q5ZL39              	100.00%
F6Y1K6              	45.33%		
Bootstrap support for F6Q5E4 as seed ortholog is 100%.
Bootstrap support for Q5ZL39 as seed ortholog is 68%.
Alternative seed ortholog is P62207 (12 bits away from this cluster)

Group of orthologs #900. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:613 G.gallus:613

F6YND1              	100.00%		F1NU17              	100.00%
                    	       		P51903              	100.00%
Bootstrap support for F6YND1 as seed ortholog is 100%.
Bootstrap support for F1NU17 as seed ortholog is 100%.
Bootstrap support for P51903 as seed ortholog is 100%.

Group of orthologs #901. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:613 G.gallus:495

H2XVM0              	100.00%		Q5ZLR4              	100.00%
                    	       		F1P509              	15.54%
Bootstrap support for H2XVM0 as seed ortholog is 100%.
Bootstrap support for Q5ZLR4 as seed ortholog is 100%.

Group of orthologs #902. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:613 G.gallus:116

F6SDU9              	100.00%		F1N9D6              	100.00%
Bootstrap support for F6SDU9 as seed ortholog is 100%.
Bootstrap support for F1N9D6 as seed ortholog is 99%.

Group of orthologs #903. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:613 G.gallus:613

F6TGV4              	100.00%		Q5ZLW3              	100.00%
Bootstrap support for F6TGV4 as seed ortholog is 100%.
Bootstrap support for Q5ZLW3 as seed ortholog is 100%.

Group of orthologs #904. Best score 612 bits
Score difference with first non-orthologous sequence - C.intestinalis:612 G.gallus:612

F6SDZ0              	100.00%		E1C6J3              	100.00%
                    	       		E1BQR7              	49.44%
Bootstrap support for F6SDZ0 as seed ortholog is 100%.
Bootstrap support for E1C6J3 as seed ortholog is 100%.

Group of orthologs #905. Best score 612 bits
Score difference with first non-orthologous sequence - C.intestinalis:612 G.gallus:612

H2XY06              	100.00%		E1BQT1              	100.00%
Bootstrap support for H2XY06 as seed ortholog is 100%.
Bootstrap support for E1BQT1 as seed ortholog is 100%.

Group of orthologs #906. Best score 612 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 G.gallus:186

F6TVZ8              	100.00%		Q5ZM58              	100.00%
Bootstrap support for F6TVZ8 as seed ortholog is 100%.
Bootstrap support for Q5ZM58 as seed ortholog is 100%.

Group of orthologs #907. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 G.gallus:454

F6V299              	100.00%		E1C6W3              	100.00%
                    	       		F1NSM5              	28.29%
Bootstrap support for F6V299 as seed ortholog is 100%.
Bootstrap support for E1C6W3 as seed ortholog is 100%.

Group of orthologs #908. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:611 G.gallus:611

H2XYJ2              	100.00%		E1C4U4              	100.00%
                    	       		Q5ZMP7              	51.32%
Bootstrap support for H2XYJ2 as seed ortholog is 100%.
Bootstrap support for E1C4U4 as seed ortholog is 100%.

Group of orthologs #909. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:611 G.gallus:431

F6VR09              	100.00%		E1BTT4              	100.00%
Bootstrap support for F6VR09 as seed ortholog is 100%.
Bootstrap support for E1BTT4 as seed ortholog is 100%.

Group of orthologs #910. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 G.gallus:453

F6XLX0              	100.00%		E1C1M7              	100.00%
Bootstrap support for F6XLX0 as seed ortholog is 100%.
Bootstrap support for E1C1M7 as seed ortholog is 100%.

Group of orthologs #911. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:611 G.gallus:611

F6YZ22              	100.00%		E1C593              	100.00%
Bootstrap support for F6YZ22 as seed ortholog is 100%.
Bootstrap support for E1C593 as seed ortholog is 100%.

Group of orthologs #912. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:611 G.gallus:492

F6SMZ6              	100.00%		F1NZU1              	100.00%
Bootstrap support for F6SMZ6 as seed ortholog is 100%.
Bootstrap support for F1NZU1 as seed ortholog is 100%.

Group of orthologs #913. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:611 G.gallus:611

H2XUU5              	100.00%		Q5ZLM0              	100.00%
Bootstrap support for H2XUU5 as seed ortholog is 100%.
Bootstrap support for Q5ZLM0 as seed ortholog is 100%.

Group of orthologs #914. Best score 609 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:267

F7B6X8              	100.00%		F1NX01              	100.00%
                    	       		F1NPX8              	23.80%
Bootstrap support for F7B6X8 as seed ortholog is 99%.
Bootstrap support for F1NX01 as seed ortholog is 100%.

Group of orthologs #915. Best score 609 bits
Score difference with first non-orthologous sequence - C.intestinalis:609 G.gallus:609

F6W141              	100.00%		Q5ZM73              	100.00%
                    	       		Q5ZM83              	33.54%
Bootstrap support for F6W141 as seed ortholog is 100%.
Bootstrap support for Q5ZM73 as seed ortholog is 100%.

Group of orthologs #916. Best score 609 bits
Score difference with first non-orthologous sequence - C.intestinalis:609 G.gallus:609

F6YNT4              	100.00%		E1BR57              	100.00%
Bootstrap support for F6YNT4 as seed ortholog is 100%.
Bootstrap support for E1BR57 as seed ortholog is 100%.

Group of orthologs #917. Best score 609 bits
Score difference with first non-orthologous sequence - C.intestinalis:609 G.gallus:609

F7ALJ6              	100.00%		E1BZ78              	100.00%
Bootstrap support for F7ALJ6 as seed ortholog is 100%.
Bootstrap support for E1BZ78 as seed ortholog is 100%.

Group of orthologs #918. Best score 609 bits
Score difference with first non-orthologous sequence - C.intestinalis:609 G.gallus:609

H2Y1W6              	100.00%		E1C3Q6              	100.00%
Bootstrap support for H2Y1W6 as seed ortholog is 100%.
Bootstrap support for E1C3Q6 as seed ortholog is 100%.

Group of orthologs #919. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 G.gallus:504

H2XS58              	100.00%		F1NEX7              	100.00%
                    	       		Q5F488              	15.51%
                    	       		F1NMZ1              	10.54%
Bootstrap support for H2XS58 as seed ortholog is 100%.
Bootstrap support for F1NEX7 as seed ortholog is 100%.

Group of orthologs #920. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:608 G.gallus:608

F7BML6              	100.00%		F1P3C7              	100.00%
                    	       		E1C7N2              	52.92%
Bootstrap support for F7BML6 as seed ortholog is 100%.
Bootstrap support for F1P3C7 as seed ortholog is 100%.

Group of orthologs #921. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 G.gallus:253

F6REQ0              	100.00%		F1NIB3              	100.00%
Bootstrap support for F6REQ0 as seed ortholog is 100%.
Bootstrap support for F1NIB3 as seed ortholog is 100%.

Group of orthologs #922. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 G.gallus:332

F6WXC5              	100.00%		E1BXH4              	100.00%
Bootstrap support for F6WXC5 as seed ortholog is 100%.
Bootstrap support for E1BXH4 as seed ortholog is 100%.

Group of orthologs #923. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 G.gallus:370

F6X753              	100.00%		E1BXG6              	100.00%
Bootstrap support for F6X753 as seed ortholog is 94%.
Bootstrap support for E1BXG6 as seed ortholog is 100%.

Group of orthologs #924. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 G.gallus:607

H2XS52              	100.00%		E1BW84              	100.00%
Bootstrap support for H2XS52 as seed ortholog is 100%.
Bootstrap support for E1BW84 as seed ortholog is 100%.

Group of orthologs #925. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 G.gallus:607

F6YHS8              	100.00%		F1NPQ0              	100.00%
Bootstrap support for F6YHS8 as seed ortholog is 100%.
Bootstrap support for F1NPQ0 as seed ortholog is 100%.

Group of orthologs #926. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 G.gallus:607

F6XIQ9              	100.00%		P00508              	100.00%
Bootstrap support for F6XIQ9 as seed ortholog is 100%.
Bootstrap support for P00508 as seed ortholog is 100%.

Group of orthologs #927. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 G.gallus:427

F7B040              	100.00%		F1P4D7              	100.00%
Bootstrap support for F7B040 as seed ortholog is 100%.
Bootstrap support for F1P4D7 as seed ortholog is 100%.

Group of orthologs #928. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:606 G.gallus:606

F6SDM6              	100.00%		Q5ZK62              	100.00%
                    	       		F1NGZ5              	36.56%
Bootstrap support for F6SDM6 as seed ortholog is 100%.
Bootstrap support for Q5ZK62 as seed ortholog is 100%.

Group of orthologs #929. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:606 G.gallus:606

F6YJE0              	100.00%		E1BWN2              	100.00%
Bootstrap support for F6YJE0 as seed ortholog is 100%.
Bootstrap support for E1BWN2 as seed ortholog is 100%.

Group of orthologs #930. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 G.gallus:183

F6Q2J0              	100.00%		F1NQU3              	100.00%
Bootstrap support for F6Q2J0 as seed ortholog is 100%.
Bootstrap support for F1NQU3 as seed ortholog is 99%.

Group of orthologs #931. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:606 G.gallus:606

F6YG81              	100.00%		F1NGM7              	100.00%
Bootstrap support for F6YG81 as seed ortholog is 100%.
Bootstrap support for F1NGM7 as seed ortholog is 100%.

Group of orthologs #932. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:606 G.gallus:606

H2XJZ4              	100.00%		Q5ZJF6              	100.00%
Bootstrap support for H2XJZ4 as seed ortholog is 100%.
Bootstrap support for Q5ZJF6 as seed ortholog is 100%.

Group of orthologs #933. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 G.gallus:605

F6XFJ7              	100.00%		E1BX38              	100.00%
                    	       		E1C6D5              	30.67%
                    	       		F1N9S1              	21.96%
Bootstrap support for F6XFJ7 as seed ortholog is 100%.
Bootstrap support for E1BX38 as seed ortholog is 100%.

Group of orthologs #934. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 G.gallus:605

F6UHR3              	100.00%		E1BUH3              	100.00%
Bootstrap support for F6UHR3 as seed ortholog is 100%.
Bootstrap support for E1BUH3 as seed ortholog is 100%.

Group of orthologs #935. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 G.gallus:605

F6VMS4              	100.00%		P51027              	100.00%
Bootstrap support for F6VMS4 as seed ortholog is 100%.
Bootstrap support for P51027 as seed ortholog is 100%.

Group of orthologs #936. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 G.gallus:605

H2XZ93              	100.00%		F1NQG9              	100.00%
Bootstrap support for H2XZ93 as seed ortholog is 100%.
Bootstrap support for F1NQG9 as seed ortholog is 100%.

Group of orthologs #937. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:604 G.gallus:604

H2XS38              	100.00%		E1BT68              	100.00%
                    	       		F1NSA6              	33.40%
                    	       		E1BWQ1              	22.88%
Bootstrap support for H2XS38 as seed ortholog is 100%.
Bootstrap support for E1BT68 as seed ortholog is 100%.

Group of orthologs #938. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:604 G.gallus:604

F6RKQ2              	100.00%		Q5ZMA2              	100.00%
Bootstrap support for F6RKQ2 as seed ortholog is 100%.
Bootstrap support for Q5ZMA2 as seed ortholog is 100%.

Group of orthologs #939. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:318

F6VAS2              	100.00%		P48463              	100.00%
Bootstrap support for F6VAS2 as seed ortholog is 100%.
Bootstrap support for P48463 as seed ortholog is 100%.

Group of orthologs #940. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:603 G.gallus:395

F6YWY7              	100.00%		F1P0K7              	100.00%
                    	       		E1BUK2              	23.45%
                    	       		E1BXR3              	12.41%
Bootstrap support for F6YWY7 as seed ortholog is 100%.
Bootstrap support for F1P0K7 as seed ortholog is 100%.

Group of orthologs #941. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:603 G.gallus:603

H2Y2D6              	100.00%		F1NEP3              	100.00%
                    	       		F1P3B9              	20.22%
Bootstrap support for H2Y2D6 as seed ortholog is 100%.
Bootstrap support for F1NEP3 as seed ortholog is 100%.

Group of orthologs #942. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:603 G.gallus:603

Q5QQ55              	100.00%		F1NU53              	100.00%
                    	       		F1P232              	32.93%
Bootstrap support for Q5QQ55 as seed ortholog is 100%.
Bootstrap support for F1NU53 as seed ortholog is 100%.

Group of orthologs #943. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 G.gallus:511

F6W3R8              	100.00%		P67962              	100.00%
Bootstrap support for F6W3R8 as seed ortholog is 52%.
Alternative seed ortholog is F6VHP9 (1 bits away from this cluster)
Bootstrap support for P67962 as seed ortholog is 100%.

Group of orthologs #944. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 G.gallus:398

F6ZAX9              	100.00%		E1C7K6              	100.00%
H2XN25              	37.50%		E1C7K7              	54.09%
Bootstrap support for F6ZAX9 as seed ortholog is 96%.
Bootstrap support for E1C7K6 as seed ortholog is 100%.

Group of orthologs #945. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:602 G.gallus:347

F6YLZ5              	100.00%		E1BSB3              	100.00%
                    	       		F1NC32              	25.68%
Bootstrap support for F6YLZ5 as seed ortholog is 100%.
Bootstrap support for E1BSB3 as seed ortholog is 100%.

Group of orthologs #946. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:602 G.gallus:602

H2XUW1              	100.00%		F1NWT4              	100.00%
Bootstrap support for H2XUW1 as seed ortholog is 100%.
Bootstrap support for F1NWT4 as seed ortholog is 100%.

Group of orthologs #947. Best score 602 bits
Score difference with first non-orthologous sequence - C.intestinalis:533 G.gallus:176

Q4H3S1              	100.00%		Q90733              	100.00%
Bootstrap support for Q4H3S1 as seed ortholog is 100%.
Bootstrap support for Q90733 as seed ortholog is 100%.

Group of orthologs #948. Best score 601 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 G.gallus:320

F7B684              	100.00%		E1BT18              	100.00%
                    	       		H9L008              	12.10%
Bootstrap support for F7B684 as seed ortholog is 100%.
Bootstrap support for E1BT18 as seed ortholog is 100%.

Group of orthologs #949. Best score 601 bits
Score difference with first non-orthologous sequence - C.intestinalis:601 G.gallus:601

F6Q9C5              	100.00%		F1NMC6              	100.00%
Bootstrap support for F6Q9C5 as seed ortholog is 100%.
Bootstrap support for F1NMC6 as seed ortholog is 100%.

Group of orthologs #950. Best score 601 bits
Score difference with first non-orthologous sequence - C.intestinalis:601 G.gallus:464

F7B1U4              	100.00%		F1N961              	100.00%
Bootstrap support for F7B1U4 as seed ortholog is 100%.
Bootstrap support for F1N961 as seed ortholog is 100%.

Group of orthologs #951. Best score 601 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 G.gallus:355

F6RNS7              	100.00%		Q5ZMI9              	100.00%
Bootstrap support for F6RNS7 as seed ortholog is 100%.
Bootstrap support for Q5ZMI9 as seed ortholog is 100%.

Group of orthologs #952. Best score 600 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 G.gallus:482

F6WTM4              	100.00%		E1C7J6              	100.00%
Bootstrap support for F6WTM4 as seed ortholog is 100%.
Bootstrap support for E1C7J6 as seed ortholog is 100%.

Group of orthologs #953. Best score 600 bits
Score difference with first non-orthologous sequence - C.intestinalis:600 G.gallus:319

H2XXR6              	100.00%		E1C1T7              	100.00%
Bootstrap support for H2XXR6 as seed ortholog is 100%.
Bootstrap support for E1C1T7 as seed ortholog is 100%.

Group of orthologs #954. Best score 599 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 G.gallus:46

F6W833              	100.00%		E1BSS9              	100.00%
L7N0R6              	50.81%		
H2Y1N3              	20.97%		
F6XCJ9              	19.19%		
F6W7L1              	18.71%		
Bootstrap support for F6W833 as seed ortholog is 61%.
Alternative seed ortholog is F6VSX4 (11 bits away from this cluster)
Bootstrap support for E1BSS9 as seed ortholog is 84%.

Group of orthologs #955. Best score 599 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 G.gallus:521

F6T636              	100.00%		F1P0R5              	100.00%
                    	       		F1NAM6              	28.31%
Bootstrap support for F6T636 as seed ortholog is 100%.
Bootstrap support for F1P0R5 as seed ortholog is 100%.

Group of orthologs #956. Best score 599 bits
Score difference with first non-orthologous sequence - C.intestinalis:599 G.gallus:599

F6VJS2              	100.00%		E1BZF6              	100.00%
Bootstrap support for F6VJS2 as seed ortholog is 100%.
Bootstrap support for E1BZF6 as seed ortholog is 100%.

Group of orthologs #957. Best score 599 bits
Score difference with first non-orthologous sequence - C.intestinalis:552 G.gallus:547

F6UHI7              	100.00%		Q5ZLK1              	100.00%
Bootstrap support for F6UHI7 as seed ortholog is 100%.
Bootstrap support for Q5ZLK1 as seed ortholog is 100%.

Group of orthologs #958. Best score 598 bits
Score difference with first non-orthologous sequence - C.intestinalis:598 G.gallus:80

F6UJI9              	100.00%		F1P209              	100.00%
Bootstrap support for F6UJI9 as seed ortholog is 100%.
Bootstrap support for F1P209 as seed ortholog is 98%.

Group of orthologs #959. Best score 597 bits
Score difference with first non-orthologous sequence - C.intestinalis:597 G.gallus:597

H2XVM3              	100.00%		E1C576              	100.00%
Bootstrap support for H2XVM3 as seed ortholog is 100%.
Bootstrap support for E1C576 as seed ortholog is 100%.

Group of orthologs #960. Best score 597 bits
Score difference with first non-orthologous sequence - C.intestinalis:597 G.gallus:597

F6ZA03              	100.00%		F1P0A8              	100.00%
Bootstrap support for F6ZA03 as seed ortholog is 100%.
Bootstrap support for F1P0A8 as seed ortholog is 100%.

Group of orthologs #961. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:596 G.gallus:596

F6R1A2              	100.00%		E1BRC0              	100.00%
Bootstrap support for F6R1A2 as seed ortholog is 100%.
Bootstrap support for E1BRC0 as seed ortholog is 100%.

Group of orthologs #962. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 G.gallus:330

F6WWC7              	100.00%		E1C1L7              	100.00%
Bootstrap support for F6WWC7 as seed ortholog is 100%.
Bootstrap support for E1C1L7 as seed ortholog is 100%.

Group of orthologs #963. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 G.gallus:489

F6SZ54              	100.00%		F1NGW4              	100.00%
Bootstrap support for F6SZ54 as seed ortholog is 100%.
Bootstrap support for F1NGW4 as seed ortholog is 100%.

Group of orthologs #964. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:596 G.gallus:364

F6VLB0              	100.00%		F1NEQ5              	100.00%
Bootstrap support for F6VLB0 as seed ortholog is 100%.
Bootstrap support for F1NEQ5 as seed ortholog is 100%.

Group of orthologs #965. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:596 G.gallus:596

F6Y7P7              	100.00%		F1P4X7              	100.00%
Bootstrap support for F6Y7P7 as seed ortholog is 100%.
Bootstrap support for F1P4X7 as seed ortholog is 100%.

Group of orthologs #966. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:596 G.gallus:515

L7N0S3              	100.00%		F1NC11              	100.00%
Bootstrap support for L7N0S3 as seed ortholog is 100%.
Bootstrap support for F1NC11 as seed ortholog is 100%.

Group of orthologs #967. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:596 G.gallus:596

H2XZ65              	100.00%		P28173              	100.00%
Bootstrap support for H2XZ65 as seed ortholog is 100%.
Bootstrap support for P28173 as seed ortholog is 100%.

Group of orthologs #968. Best score 595 bits
Score difference with first non-orthologous sequence - C.intestinalis:595 G.gallus:305

F6V4B3              	100.00%		E1BUR2              	100.00%
Bootstrap support for F6V4B3 as seed ortholog is 100%.
Bootstrap support for E1BUR2 as seed ortholog is 100%.

Group of orthologs #969. Best score 595 bits
Score difference with first non-orthologous sequence - C.intestinalis:595 G.gallus:595

H2XNT1              	100.00%		E1C2B0              	100.00%
Bootstrap support for H2XNT1 as seed ortholog is 100%.
Bootstrap support for E1C2B0 as seed ortholog is 100%.

Group of orthologs #970. Best score 595 bits
Score difference with first non-orthologous sequence - C.intestinalis:595 G.gallus:198

F7AD70              	100.00%		Q5ZKD7              	100.00%
Bootstrap support for F7AD70 as seed ortholog is 100%.
Bootstrap support for Q5ZKD7 as seed ortholog is 99%.

Group of orthologs #971. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:594 G.gallus:594

F6XHG6              	100.00%		E1C1S1              	100.00%
                    	       		F1NC25              	32.85%
                    	       		E1BY59              	18.81%
Bootstrap support for F6XHG6 as seed ortholog is 100%.
Bootstrap support for E1C1S1 as seed ortholog is 100%.

Group of orthologs #972. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:594 G.gallus:391

F6ZQ65              	100.00%		F1P4A4              	100.00%
                    	       		Q5ZHM9              	34.14%
Bootstrap support for F6ZQ65 as seed ortholog is 100%.
Bootstrap support for F1P4A4 as seed ortholog is 100%.

Group of orthologs #973. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 G.gallus:328

F6PH07              	100.00%		E1BRS0              	100.00%
Bootstrap support for F6PH07 as seed ortholog is 100%.
Bootstrap support for E1BRS0 as seed ortholog is 100%.

Group of orthologs #974. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:594 G.gallus:594

F6W0L1              	100.00%		F1P474              	100.00%
Bootstrap support for F6W0L1 as seed ortholog is 100%.
Bootstrap support for F1P474 as seed ortholog is 100%.

Group of orthologs #975. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:531 G.gallus:593

F6R6J0              	100.00%		F1NNH9              	100.00%
Bootstrap support for F6R6J0 as seed ortholog is 100%.
Bootstrap support for F1NNH9 as seed ortholog is 100%.

Group of orthologs #976. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 G.gallus:395

F7BHM4              	100.00%		E1BW15              	100.00%
Bootstrap support for F7BHM4 as seed ortholog is 100%.
Bootstrap support for E1BW15 as seed ortholog is 100%.

Group of orthologs #977. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:592 G.gallus:592

F6RXC5              	100.00%		F1P3K3              	100.00%
                    	       		E1BT27              	35.32%
                    	       		F1NMA8              	23.08%
Bootstrap support for F6RXC5 as seed ortholog is 100%.
Bootstrap support for F1P3K3 as seed ortholog is 100%.

Group of orthologs #978. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:592 G.gallus:592

F6UNT7              	100.00%		Q5F471              	100.00%
                    	       		E1BQH6              	10.30%
Bootstrap support for F6UNT7 as seed ortholog is 100%.
Bootstrap support for Q5F471 as seed ortholog is 100%.

Group of orthologs #979. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:592 G.gallus:592

F6Z7L9              	100.00%		E1BRW0              	100.00%
Bootstrap support for F6Z7L9 as seed ortholog is 100%.
Bootstrap support for E1BRW0 as seed ortholog is 100%.

Group of orthologs #980. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:592 G.gallus:592

F7BQ94              	100.00%		F1NYW8              	100.00%
Bootstrap support for F7BQ94 as seed ortholog is 100%.
Bootstrap support for F1NYW8 as seed ortholog is 100%.

Group of orthologs #981. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:131

Q8WSS1              	100.00%		P50146              	100.00%
                    	       		E1BXS2              	93.44%
                    	       		P50147              	39.34%
Bootstrap support for Q8WSS1 as seed ortholog is 100%.
Bootstrap support for P50146 as seed ortholog is 100%.

Group of orthologs #982. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:591 G.gallus:183

F6T3V6              	100.00%		Q01406              	100.00%
                    	       		F1NU55              	98.05%
Bootstrap support for F6T3V6 as seed ortholog is 100%.
Bootstrap support for Q01406 as seed ortholog is 99%.

Group of orthologs #983. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 G.gallus:591

F6ZIP1              	100.00%		F1N9E7              	100.00%
Bootstrap support for F6ZIP1 as seed ortholog is 100%.
Bootstrap support for F1N9E7 as seed ortholog is 100%.

Group of orthologs #984. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:591 G.gallus:591

F6YW68              	100.00%		F1NGK9              	100.00%
Bootstrap support for F6YW68 as seed ortholog is 100%.
Bootstrap support for F1NGK9 as seed ortholog is 100%.

Group of orthologs #985. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:591 G.gallus:591

F7A1R5              	100.00%		F1NGY5              	100.00%
Bootstrap support for F7A1R5 as seed ortholog is 100%.
Bootstrap support for F1NGY5 as seed ortholog is 100%.

Group of orthologs #986. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:591 G.gallus:469

F6UX10              	100.00%		Q90YB1              	100.00%
Bootstrap support for F6UX10 as seed ortholog is 100%.
Bootstrap support for Q90YB1 as seed ortholog is 100%.

Group of orthologs #987. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:591 G.gallus:591

H2XSN2              	100.00%		F1NZA5              	100.00%
Bootstrap support for H2XSN2 as seed ortholog is 100%.
Bootstrap support for F1NZA5 as seed ortholog is 100%.

Group of orthologs #988. Best score 590 bits
Score difference with first non-orthologous sequence - C.intestinalis:590 G.gallus:590

F6Y901              	100.00%		F1N9B4              	100.00%
Bootstrap support for F6Y901 as seed ortholog is 100%.
Bootstrap support for F1N9B4 as seed ortholog is 100%.

Group of orthologs #989. Best score 590 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 G.gallus:334

H2XK60              	100.00%		F1NF35              	100.00%
Bootstrap support for H2XK60 as seed ortholog is 100%.
Bootstrap support for F1NF35 as seed ortholog is 100%.

Group of orthologs #990. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:531 G.gallus:520

F7AAV2              	100.00%		P27607              	100.00%
F6SDP7              	13.24%		F1P3I2              	34.58%
Bootstrap support for F7AAV2 as seed ortholog is 100%.
Bootstrap support for P27607 as seed ortholog is 100%.

Group of orthologs #991. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:589 G.gallus:316

F7B5K2              	100.00%		F1NI11              	100.00%
                    	       		F1NQ76              	37.98%
Bootstrap support for F7B5K2 as seed ortholog is 100%.
Bootstrap support for F1NI11 as seed ortholog is 100%.

Group of orthologs #992. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:196

H2XQ28              	100.00%		Q67BJ2              	100.00%
                    	       		E1BXR5              	36.08%
Bootstrap support for H2XQ28 as seed ortholog is 90%.
Bootstrap support for Q67BJ2 as seed ortholog is 99%.

Group of orthologs #993. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 G.gallus:589

F6W3N0              	100.00%		F1P0A1              	100.00%
Bootstrap support for F6W3N0 as seed ortholog is 85%.
Bootstrap support for F1P0A1 as seed ortholog is 100%.

Group of orthologs #994. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:589 G.gallus:589

F6QK56              	100.00%		Q9YH58              	100.00%
Bootstrap support for F6QK56 as seed ortholog is 100%.
Bootstrap support for Q9YH58 as seed ortholog is 100%.

Group of orthologs #995. Best score 588 bits
Score difference with first non-orthologous sequence - C.intestinalis:588 G.gallus:588

F6ZTJ9              	100.00%		F1NUL7              	100.00%
Bootstrap support for F6ZTJ9 as seed ortholog is 100%.
Bootstrap support for F1NUL7 as seed ortholog is 100%.

Group of orthologs #996. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 G.gallus:587

F6RFB0              	100.00%		F1NWZ1              	100.00%
                    	       		F1NF99              	36.05%
Bootstrap support for F6RFB0 as seed ortholog is 100%.
Bootstrap support for F1NWZ1 as seed ortholog is 100%.

Group of orthologs #997. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 G.gallus:587

F6USH9              	100.00%		E1C707              	100.00%
Bootstrap support for F6USH9 as seed ortholog is 100%.
Bootstrap support for E1C707 as seed ortholog is 100%.

Group of orthologs #998. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 G.gallus:411

F7A713              	100.00%		E1C430              	100.00%
Bootstrap support for F7A713 as seed ortholog is 100%.
Bootstrap support for E1C430 as seed ortholog is 100%.

Group of orthologs #999. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 G.gallus:302

F6XGL3              	100.00%		F1NKU2              	100.00%
Bootstrap support for F6XGL3 as seed ortholog is 100%.
Bootstrap support for F1NKU2 as seed ortholog is 100%.

Group of orthologs #1000. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 G.gallus:229

F6XAQ8              	100.00%		F1NPM4              	100.00%
Bootstrap support for F6XAQ8 as seed ortholog is 100%.
Bootstrap support for F1NPM4 as seed ortholog is 99%.

Group of orthologs #1001. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 G.gallus:392

H2XPW5              	100.00%		E1C8N6              	100.00%
Bootstrap support for H2XPW5 as seed ortholog is 100%.
Bootstrap support for E1C8N6 as seed ortholog is 100%.

Group of orthologs #1002. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:586 G.gallus:586

F6UHC9              	100.00%		E1C6R0              	100.00%
Bootstrap support for F6UHC9 as seed ortholog is 100%.
Bootstrap support for E1C6R0 as seed ortholog is 100%.

Group of orthologs #1003. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:586 G.gallus:586

H2XZT6              	100.00%		F1NK16              	100.00%
Bootstrap support for H2XZT6 as seed ortholog is 100%.
Bootstrap support for F1NK16 as seed ortholog is 100%.

Group of orthologs #1004. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:586 G.gallus:586

F7A4H8              	100.00%		Q5F3B9              	100.00%
Bootstrap support for F7A4H8 as seed ortholog is 100%.
Bootstrap support for Q5F3B9 as seed ortholog is 100%.

Group of orthologs #1005. Best score 585 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 G.gallus:585

F6UEZ5              	100.00%		Q90YJ9              	100.00%
Bootstrap support for F6UEZ5 as seed ortholog is 100%.
Bootstrap support for Q90YJ9 as seed ortholog is 100%.

Group of orthologs #1006. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 G.gallus:303

F6ZI02              	100.00%		E1C5V6              	100.00%
H2XY21              	5.87%		
Bootstrap support for F6ZI02 as seed ortholog is 100%.
Bootstrap support for E1C5V6 as seed ortholog is 100%.

Group of orthologs #1007. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:170

F6Y1R8              	100.00%		E1C3D8              	100.00%
Bootstrap support for F6Y1R8 as seed ortholog is 99%.
Bootstrap support for E1C3D8 as seed ortholog is 99%.

Group of orthologs #1008. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 G.gallus:268

F6UDY1              	100.00%		F1ND49              	100.00%
Bootstrap support for F6UDY1 as seed ortholog is 100%.
Bootstrap support for F1ND49 as seed ortholog is 100%.

Group of orthologs #1009. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 G.gallus:497

F6RB18              	100.00%		F1NUX8              	100.00%
Bootstrap support for F6RB18 as seed ortholog is 100%.
Bootstrap support for F1NUX8 as seed ortholog is 100%.

Group of orthologs #1010. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 G.gallus:584

F6Y1T4              	100.00%		F1P5Q2              	100.00%
Bootstrap support for F6Y1T4 as seed ortholog is 100%.
Bootstrap support for F1P5Q2 as seed ortholog is 100%.

Group of orthologs #1011. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 G.gallus:446

F6ZN89              	100.00%		F1P0X4              	100.00%
Bootstrap support for F6ZN89 as seed ortholog is 100%.
Bootstrap support for F1P0X4 as seed ortholog is 100%.

Group of orthologs #1012. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 G.gallus:401

H2XX53              	100.00%		F1NZD0              	100.00%
Bootstrap support for H2XX53 as seed ortholog is 100%.
Bootstrap support for F1NZD0 as seed ortholog is 100%.

Group of orthologs #1013. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 G.gallus:498

F7AW67              	100.00%		E1BW98              	100.00%
                    	       		F1NLV4              	37.10%
                    	       		E1C9D6              	18.55%
Bootstrap support for F7AW67 as seed ortholog is 100%.
Bootstrap support for E1BW98 as seed ortholog is 100%.

Group of orthologs #1014. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 G.gallus:500

F7AVN5              	100.00%		Q5ZJK7              	100.00%
                    	       		E1C047              	31.54%
Bootstrap support for F7AVN5 as seed ortholog is 100%.
Bootstrap support for Q5ZJK7 as seed ortholog is 100%.

Group of orthologs #1015. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 G.gallus:582

F6SNM2              	100.00%		E1BVB2              	100.00%
Bootstrap support for F6SNM2 as seed ortholog is 100%.
Bootstrap support for E1BVB2 as seed ortholog is 100%.

Group of orthologs #1016. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 G.gallus:139

F6X0I3              	100.00%		F1NKS5              	100.00%
Bootstrap support for F6X0I3 as seed ortholog is 100%.
Bootstrap support for F1NKS5 as seed ortholog is 99%.

Group of orthologs #1017. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 G.gallus:345

F7BQ75              	100.00%		F1NZ06              	100.00%
Bootstrap support for F7BQ75 as seed ortholog is 100%.
Bootstrap support for F1NZ06 as seed ortholog is 100%.

Group of orthologs #1018. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 G.gallus:435

F6ZUU0              	100.00%		Q5ZLN8              	100.00%
Bootstrap support for F6ZUU0 as seed ortholog is 100%.
Bootstrap support for Q5ZLN8 as seed ortholog is 100%.

Group of orthologs #1019. Best score 581 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 G.gallus:188

F7AJJ2              	100.00%		F1NE59              	100.00%
F6TUF1              	17.27%		
F6PWZ1              	10.09%		
F6ZVR9              	9.28%		
Bootstrap support for F7AJJ2 as seed ortholog is 99%.
Bootstrap support for F1NE59 as seed ortholog is 97%.

Group of orthologs #1020. Best score 581 bits
Score difference with first non-orthologous sequence - C.intestinalis:581 G.gallus:437

F6WAD4              	100.00%		E1C649              	100.00%
Bootstrap support for F6WAD4 as seed ortholog is 100%.
Bootstrap support for E1C649 as seed ortholog is 100%.

Group of orthologs #1021. Best score 581 bits
Score difference with first non-orthologous sequence - C.intestinalis:581 G.gallus:581

F7BD94              	100.00%		F1NKX2              	100.00%
Bootstrap support for F7BD94 as seed ortholog is 100%.
Bootstrap support for F1NKX2 as seed ortholog is 100%.

Group of orthologs #1022. Best score 580 bits
Score difference with first non-orthologous sequence - C.intestinalis:580 G.gallus:580

H2XT92              	100.00%		F1NUL5              	100.00%
                    	       		F1P125              	100.00%
Bootstrap support for H2XT92 as seed ortholog is 100%.
Bootstrap support for F1NUL5 as seed ortholog is 100%.
Bootstrap support for F1P125 as seed ortholog is 100%.

Group of orthologs #1023. Best score 580 bits
Score difference with first non-orthologous sequence - C.intestinalis:580 G.gallus:436

F7B221              	100.00%		Q5ZL81              	100.00%
                    	       		E1BV80              	41.07%
Bootstrap support for F7B221 as seed ortholog is 100%.
Bootstrap support for Q5ZL81 as seed ortholog is 100%.

Group of orthologs #1024. Best score 580 bits
Score difference with first non-orthologous sequence - C.intestinalis:580 G.gallus:580

F6R999              	100.00%		F1NDZ9              	100.00%
Bootstrap support for F6R999 as seed ortholog is 100%.
Bootstrap support for F1NDZ9 as seed ortholog is 100%.

Group of orthologs #1025. Best score 580 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 G.gallus:289

F6U1L2              	100.00%		Q5ZL56              	100.00%
Bootstrap support for F6U1L2 as seed ortholog is 100%.
Bootstrap support for Q5ZL56 as seed ortholog is 100%.

Group of orthologs #1026. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 G.gallus:88

F7A9Y8              	100.00%		Q5ZJ82              	100.00%
                    	       		F1NLR7              	9.54%
Bootstrap support for F7A9Y8 as seed ortholog is 100%.
Bootstrap support for Q5ZJ82 as seed ortholog is 99%.

Group of orthologs #1027. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 G.gallus:239

F6S8U4              	100.00%		F1P4K4              	100.00%
Bootstrap support for F6S8U4 as seed ortholog is 100%.
Bootstrap support for F1P4K4 as seed ortholog is 100%.

Group of orthologs #1028. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 G.gallus:579

H2XKN0              	100.00%		F1NZV3              	100.00%
Bootstrap support for H2XKN0 as seed ortholog is 100%.
Bootstrap support for F1NZV3 as seed ortholog is 100%.

Group of orthologs #1029. Best score 578 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:257

F6QBL6              	100.00%		P07228              	100.00%
                    	       		F1NM67              	18.55%
                    	       		F1NS08              	11.20%
                    	       		F1NME2              	7.17%
                    	       		E1C6K8              	6.09%
Bootstrap support for F6QBL6 as seed ortholog is 89%.
Bootstrap support for P07228 as seed ortholog is 100%.

Group of orthologs #1030. Best score 578 bits
Score difference with first non-orthologous sequence - C.intestinalis:527 G.gallus:316

Q4H3K6              	100.00%		P18460              	100.00%
F6QQF5              	81.33%		P18461              	50.93%
                    	       		P21804              	47.85%
                    	       		F1NJ92              	37.87%
Bootstrap support for Q4H3K6 as seed ortholog is 100%.
Bootstrap support for P18460 as seed ortholog is 100%.

Group of orthologs #1031. Best score 578 bits
Score difference with first non-orthologous sequence - C.intestinalis:578 G.gallus:578

F6UGC2              	100.00%		F1NS98              	100.00%
Bootstrap support for F6UGC2 as seed ortholog is 100%.
Bootstrap support for F1NS98 as seed ortholog is 100%.

Group of orthologs #1032. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 G.gallus:479

F7A6E1              	100.00%		F1P388              	100.00%
                    	       		B3TP03              	22.27%
                    	       		E1C753              	14.70%
                    	       		E1BWV8              	8.48%
Bootstrap support for F7A6E1 as seed ortholog is 71%.
Alternative seed ortholog is F7AQC2 (34 bits away from this cluster)
Bootstrap support for F1P388 as seed ortholog is 100%.

Group of orthologs #1033. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:577 G.gallus:577

F7APB5              	100.00%		F1N876              	100.00%
Bootstrap support for F7APB5 as seed ortholog is 100%.
Bootstrap support for F1N876 as seed ortholog is 100%.

Group of orthologs #1034. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:577 G.gallus:577

F6Y444              	100.00%		Q5ZKI4              	100.00%
Bootstrap support for F6Y444 as seed ortholog is 100%.
Bootstrap support for Q5ZKI4 as seed ortholog is 100%.

Group of orthologs #1035. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 G.gallus:576

Q1RL44              	100.00%		E1BQC4              	100.00%
                    	       		F1P3C2              	11.06%
Bootstrap support for Q1RL44 as seed ortholog is 100%.
Bootstrap support for E1BQC4 as seed ortholog is 100%.

Group of orthologs #1036. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 G.gallus:110

F6UBT3              	100.00%		F1P3S2              	100.00%
Bootstrap support for F6UBT3 as seed ortholog is 100%.
Bootstrap support for F1P3S2 as seed ortholog is 99%.

Group of orthologs #1037. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 G.gallus:576

F7BMR9              	100.00%		F1NHJ1              	100.00%
Bootstrap support for F7BMR9 as seed ortholog is 100%.
Bootstrap support for F1NHJ1 as seed ortholog is 100%.

Group of orthologs #1038. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 G.gallus:576

F6TMR2              	100.00%		Q5F415              	100.00%
Bootstrap support for F6TMR2 as seed ortholog is 100%.
Bootstrap support for Q5F415 as seed ortholog is 100%.

Group of orthologs #1039. Best score 575 bits
Score difference with first non-orthologous sequence - C.intestinalis:575 G.gallus:575

F6RK00              	100.00%		E1BXL1              	100.00%
Bootstrap support for F6RK00 as seed ortholog is 100%.
Bootstrap support for E1BXL1 as seed ortholog is 100%.

Group of orthologs #1040. Best score 575 bits
Score difference with first non-orthologous sequence - C.intestinalis:575 G.gallus:575

F6TIM2              	100.00%		Q5ZJL4              	100.00%
Bootstrap support for F6TIM2 as seed ortholog is 100%.
Bootstrap support for Q5ZJL4 as seed ortholog is 100%.

Group of orthologs #1041. Best score 575 bits
Score difference with first non-orthologous sequence - C.intestinalis:575 G.gallus:575

F7ACS2              	100.00%		F1NZ53              	100.00%
Bootstrap support for F7ACS2 as seed ortholog is 100%.
Bootstrap support for F1NZ53 as seed ortholog is 100%.

Group of orthologs #1042. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:574 G.gallus:574

F6WRF3              	100.00%		E1BTL9              	100.00%
Bootstrap support for F6WRF3 as seed ortholog is 100%.
Bootstrap support for E1BTL9 as seed ortholog is 100%.

Group of orthologs #1043. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 G.gallus:418

F6ZTU7              	100.00%		E1BUG5              	100.00%
Bootstrap support for F6ZTU7 as seed ortholog is 100%.
Bootstrap support for E1BUG5 as seed ortholog is 100%.

Group of orthologs #1044. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 G.gallus:574

F6WWK0              	100.00%		F1NNQ9              	100.00%
Bootstrap support for F6WWK0 as seed ortholog is 100%.
Bootstrap support for F1NNQ9 as seed ortholog is 100%.

Group of orthologs #1045. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:574 G.gallus:522

F6UNP2              	100.00%		H9L1Y1              	100.00%
Bootstrap support for F6UNP2 as seed ortholog is 100%.
Bootstrap support for H9L1Y1 as seed ortholog is 100%.

Group of orthologs #1046. Best score 573 bits
Score difference with first non-orthologous sequence - C.intestinalis:573 G.gallus:573

F6ZTX2              	100.00%		F1NF53              	100.00%
                    	       		F1NW02              	76.15%
Bootstrap support for F6ZTX2 as seed ortholog is 100%.
Bootstrap support for F1NF53 as seed ortholog is 100%.

Group of orthologs #1047. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 G.gallus:379

F7ADR7              	100.00%		E1BQB6              	100.00%
Bootstrap support for F7ADR7 as seed ortholog is 100%.
Bootstrap support for E1BQB6 as seed ortholog is 100%.

Group of orthologs #1048. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 G.gallus:490

F6PLA8              	100.00%		Q5ZJS0              	100.00%
Bootstrap support for F6PLA8 as seed ortholog is 100%.
Bootstrap support for Q5ZJS0 as seed ortholog is 100%.

Group of orthologs #1049. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:572 G.gallus:572

F6YFG4              	100.00%		F1NZM8              	100.00%
Bootstrap support for F6YFG4 as seed ortholog is 100%.
Bootstrap support for F1NZM8 as seed ortholog is 100%.

Group of orthologs #1050. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:572 G.gallus:572

H2XYB4              	100.00%		F1NDV3              	100.00%
Bootstrap support for H2XYB4 as seed ortholog is 100%.
Bootstrap support for F1NDV3 as seed ortholog is 100%.

Group of orthologs #1051. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:572 G.gallus:572

H2XPJ9              	100.00%		F1NUC2              	100.00%
Bootstrap support for H2XPJ9 as seed ortholog is 100%.
Bootstrap support for F1NUC2 as seed ortholog is 100%.

Group of orthologs #1052. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 G.gallus:272

F6WBI7              	100.00%		E1BRI3              	100.00%
F6WXA3              	41.31%		
Bootstrap support for F6WBI7 as seed ortholog is 100%.
Bootstrap support for E1BRI3 as seed ortholog is 100%.

Group of orthologs #1053. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 G.gallus:571

H2XVW1              	100.00%		P83038              	100.00%
                    	       		H9KZE7              	21.70%
Bootstrap support for H2XVW1 as seed ortholog is 100%.
Bootstrap support for P83038 as seed ortholog is 100%.

Group of orthologs #1054. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 G.gallus:481

F6TLE7              	100.00%		F1NI04              	100.00%
Bootstrap support for F6TLE7 as seed ortholog is 100%.
Bootstrap support for F1NI04 as seed ortholog is 100%.

Group of orthologs #1055. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 G.gallus:571

H2XLJ5              	100.00%		E1BVP6              	100.00%
Bootstrap support for H2XLJ5 as seed ortholog is 100%.
Bootstrap support for E1BVP6 as seed ortholog is 100%.

Group of orthologs #1056. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 G.gallus:69

F7AP89              	100.00%		F1NB56              	100.00%
Bootstrap support for F7AP89 as seed ortholog is 100%.
Bootstrap support for F1NB56 as seed ortholog is 95%.

Group of orthologs #1057. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 G.gallus:513

F7B5G0              	100.00%		F1NF37              	100.00%
Bootstrap support for F7B5G0 as seed ortholog is 100%.
Bootstrap support for F1NF37 as seed ortholog is 100%.

Group of orthologs #1058. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 G.gallus:571

H2XPV7              	100.00%		E1C7F5              	100.00%
Bootstrap support for H2XPV7 as seed ortholog is 100%.
Bootstrap support for E1C7F5 as seed ortholog is 100%.

Group of orthologs #1059. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 G.gallus:571

F6V766              	100.00%		Q5ZM16              	100.00%
Bootstrap support for F6V766 as seed ortholog is 100%.
Bootstrap support for Q5ZM16 as seed ortholog is 100%.

Group of orthologs #1060. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 G.gallus:571

F7BBV8              	100.00%		F1P4R5              	100.00%
Bootstrap support for F7BBV8 as seed ortholog is 100%.
Bootstrap support for F1P4R5 as seed ortholog is 100%.

Group of orthologs #1061. Best score 570 bits
Score difference with first non-orthologous sequence - C.intestinalis:570 G.gallus:570

F7AWU8              	100.00%		E1BZ20              	100.00%
Bootstrap support for F7AWU8 as seed ortholog is 100%.
Bootstrap support for E1BZ20 as seed ortholog is 100%.

Group of orthologs #1062. Best score 570 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 G.gallus:244

H2XSR0              	100.00%		F1NTA7              	100.00%
Bootstrap support for H2XSR0 as seed ortholog is 99%.
Bootstrap support for F1NTA7 as seed ortholog is 100%.

Group of orthologs #1063. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:569 G.gallus:274

F6W4K8              	100.00%		F1NU20              	100.00%
                    	       		F1P0L4              	74.43%
                    	       		F1NZT2              	73.51%
                    	       		E1C2Q1              	10.65%
Bootstrap support for F6W4K8 as seed ortholog is 100%.
Bootstrap support for F1NU20 as seed ortholog is 100%.

Group of orthologs #1064. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 G.gallus:161

F6YPB8              	100.00%		E1C7G8              	100.00%
                    	       		E1BUH0              	55.53%
Bootstrap support for F6YPB8 as seed ortholog is 100%.
Bootstrap support for E1C7G8 as seed ortholog is 99%.

Group of orthologs #1065. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:569 G.gallus:569

F6VJQ1              	100.00%		P0CG62              	100.00%
F6ZJN8              	100.00%		
Bootstrap support for F6VJQ1 as seed ortholog is 100%.
Bootstrap support for F6ZJN8 as seed ortholog is 100%.
Bootstrap support for P0CG62 as seed ortholog is 100%.

Group of orthologs #1066. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 G.gallus:569

F7BH30              	100.00%		P05122              	100.00%
                    	       		P00565              	40.65%
Bootstrap support for F7BH30 as seed ortholog is 100%.
Bootstrap support for P05122 as seed ortholog is 100%.

Group of orthologs #1067. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:569 G.gallus:232

H2Y307              	100.00%		E1BRB5              	100.00%
Bootstrap support for H2Y307 as seed ortholog is 100%.
Bootstrap support for E1BRB5 as seed ortholog is 100%.

Group of orthologs #1068. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:569 G.gallus:569

F7AJ78              	100.00%		F1NQJ1              	100.00%
Bootstrap support for F7AJ78 as seed ortholog is 100%.
Bootstrap support for F1NQJ1 as seed ortholog is 100%.

Group of orthologs #1069. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:569 G.gallus:569

F6SLC8              	100.00%		Q5ZM25              	100.00%
Bootstrap support for F6SLC8 as seed ortholog is 100%.
Bootstrap support for Q5ZM25 as seed ortholog is 100%.

Group of orthologs #1070. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 G.gallus:505

F6UY72              	100.00%		E1C877              	100.00%
                    	       		Q5ZMW5              	30.75%
                    	       		E1C8X0              	8.14%
Bootstrap support for F6UY72 as seed ortholog is 100%.
Bootstrap support for E1C877 as seed ortholog is 100%.

Group of orthologs #1071. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:461 G.gallus:406

F6ZP71              	100.00%		E1BW83              	100.00%
                    	       		F1NYW3              	17.11%
Bootstrap support for F6ZP71 as seed ortholog is 100%.
Bootstrap support for E1BW83 as seed ortholog is 100%.

Group of orthologs #1072. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 G.gallus:568

F6ZXD5              	100.00%		F1NU04              	100.00%
                    	       		F1NQQ2              	11.00%
Bootstrap support for F6ZXD5 as seed ortholog is 100%.
Bootstrap support for F1NU04 as seed ortholog is 100%.

Group of orthologs #1073. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:98

F6WQS9              	100.00%		P09484              	100.00%
                    	       		P26153              	23.73%
Bootstrap support for F6WQS9 as seed ortholog is 99%.
Bootstrap support for P09484 as seed ortholog is 99%.

Group of orthologs #1074. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 G.gallus:568

F6ZA35              	100.00%		Q9I9K9              	100.00%
Bootstrap support for F6ZA35 as seed ortholog is 100%.
Bootstrap support for Q9I9K9 as seed ortholog is 100%.

Group of orthologs #1075. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:567 G.gallus:521

F6YBW7              	100.00%		E1C7F8              	100.00%
Bootstrap support for F6YBW7 as seed ortholog is 100%.
Bootstrap support for E1C7F8 as seed ortholog is 100%.

Group of orthologs #1076. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 G.gallus:233

F6YJQ7              	100.00%		F1NMN7              	100.00%
Bootstrap support for F6YJQ7 as seed ortholog is 100%.
Bootstrap support for F1NMN7 as seed ortholog is 100%.

Group of orthologs #1077. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:567 G.gallus:567

F6ZHS2              	100.00%		F1P338              	100.00%
Bootstrap support for F6ZHS2 as seed ortholog is 100%.
Bootstrap support for F1P338 as seed ortholog is 100%.

Group of orthologs #1078. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:566 G.gallus:566

F6UK15              	100.00%		H9KZE0              	100.00%
                    	       		F1NJN5              	32.64%
                    	       		E1C555              	18.20%
Bootstrap support for F6UK15 as seed ortholog is 100%.
Bootstrap support for H9KZE0 as seed ortholog is 100%.

Group of orthologs #1079. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:566 G.gallus:566

F7A693              	100.00%		E1C532              	100.00%
Bootstrap support for F7A693 as seed ortholog is 100%.
Bootstrap support for E1C532 as seed ortholog is 100%.

Group of orthologs #1080. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:566 G.gallus:566

F7A9V2              	100.00%		F1NZ93              	100.00%
Bootstrap support for F7A9V2 as seed ortholog is 100%.
Bootstrap support for F1NZ93 as seed ortholog is 100%.

Group of orthologs #1081. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 G.gallus:565

F6UUY2              	100.00%		Q6TQF9              	100.00%
F6TQU2              	37.54%		E1C553              	15.61%
F6TQI0              	8.95%		
F6TB46              	7.89%		
Bootstrap support for F6UUY2 as seed ortholog is 99%.
Bootstrap support for Q6TQF9 as seed ortholog is 100%.

Group of orthologs #1082. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 G.gallus:109

F6Y4T9              	100.00%		E1BQR8              	100.00%
Bootstrap support for F6Y4T9 as seed ortholog is 63%.
Alternative seed ortholog is F6YGW9 (17 bits away from this cluster)
Bootstrap support for E1BQR8 as seed ortholog is 99%.

Group of orthologs #1083. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:565 G.gallus:389

F6YKR1              	100.00%		F1N8B7              	100.00%
Bootstrap support for F6YKR1 as seed ortholog is 100%.
Bootstrap support for F1N8B7 as seed ortholog is 100%.

Group of orthologs #1084. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:565 G.gallus:446

H2Y130              	100.00%		H9L0B9              	100.00%
Bootstrap support for H2Y130 as seed ortholog is 100%.
Bootstrap support for H9L0B9 as seed ortholog is 100%.

Group of orthologs #1085. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 G.gallus:268

F6ZMT5              	100.00%		E1C8C5              	100.00%
                    	       		E1C1H4              	70.47%
                    	       		P79996              	37.58%
Bootstrap support for F6ZMT5 as seed ortholog is 100%.
Bootstrap support for E1C8C5 as seed ortholog is 100%.

Group of orthologs #1086. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:564 G.gallus:484

F6SDE2              	100.00%		E1C477              	100.00%
                    	       		H9L0E1              	16.81%
Bootstrap support for F6SDE2 as seed ortholog is 100%.
Bootstrap support for E1C477 as seed ortholog is 100%.

Group of orthologs #1087. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:564 G.gallus:42

F6TAK8              	100.00%		E1BXP4              	100.00%
Bootstrap support for F6TAK8 as seed ortholog is 100%.
Bootstrap support for E1BXP4 as seed ortholog is 94%.

Group of orthologs #1088. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 G.gallus:483

F6V779              	100.00%		F1NFI0              	100.00%
Bootstrap support for F6V779 as seed ortholog is 100%.
Bootstrap support for F1NFI0 as seed ortholog is 100%.

Group of orthologs #1089. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 G.gallus:384

F6Y4G4              	100.00%		F1NBE3              	100.00%
Bootstrap support for F6Y4G4 as seed ortholog is 100%.
Bootstrap support for F1NBE3 as seed ortholog is 100%.

Group of orthologs #1090. Best score 564 bits
Score difference with first non-orthologous sequence - C.intestinalis:564 G.gallus:564

F6YM78              	100.00%		F1NK59              	100.00%
Bootstrap support for F6YM78 as seed ortholog is 100%.
Bootstrap support for F1NK59 as seed ortholog is 100%.

Group of orthologs #1091. Best score 563 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 G.gallus:113

F6X9M4              	100.00%		E1BS25              	100.00%
Bootstrap support for F6X9M4 as seed ortholog is 100%.
Bootstrap support for E1BS25 as seed ortholog is 98%.

Group of orthologs #1092. Best score 563 bits
Score difference with first non-orthologous sequence - C.intestinalis:563 G.gallus:563

F6WJQ9              	100.00%		F1P3V8              	100.00%
Bootstrap support for F6WJQ9 as seed ortholog is 100%.
Bootstrap support for F1P3V8 as seed ortholog is 100%.

Group of orthologs #1093. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 G.gallus:292

F6YLJ0              	100.00%		F1P5L0              	100.00%
F6VIM5              	6.09%		F1NJG7              	15.86%
Bootstrap support for F6YLJ0 as seed ortholog is 75%.
Bootstrap support for F1P5L0 as seed ortholog is 100%.

Group of orthologs #1094. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 G.gallus:562

F6RMP9              	100.00%		Q5F3X2              	100.00%
                    	       		F1NG66              	40.38%
Bootstrap support for F6RMP9 as seed ortholog is 100%.
Bootstrap support for Q5F3X2 as seed ortholog is 100%.

Group of orthologs #1095. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 G.gallus:428

F6SGJ4              	100.00%		E1BVI3              	100.00%
Bootstrap support for F6SGJ4 as seed ortholog is 100%.
Bootstrap support for E1BVI3 as seed ortholog is 100%.

Group of orthologs #1096. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 G.gallus:335

F6R4H2              	100.00%		Q5ZKN1              	100.00%
Bootstrap support for F6R4H2 as seed ortholog is 100%.
Bootstrap support for Q5ZKN1 as seed ortholog is 100%.

Group of orthologs #1097. Best score 561 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 G.gallus:561

H2XNI1              	100.00%		F1NSE3              	100.00%
Bootstrap support for H2XNI1 as seed ortholog is 100%.
Bootstrap support for F1NSE3 as seed ortholog is 100%.

Group of orthologs #1098. Best score 561 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 G.gallus:420

F6XTY4              	100.00%		Q5ZMC1              	100.00%
Bootstrap support for F6XTY4 as seed ortholog is 100%.
Bootstrap support for Q5ZMC1 as seed ortholog is 100%.

Group of orthologs #1099. Best score 561 bits
Score difference with first non-orthologous sequence - C.intestinalis:561 G.gallus:561

Q1RPX1              	100.00%		F1NGX4              	100.00%
Bootstrap support for Q1RPX1 as seed ortholog is 100%.
Bootstrap support for F1NGX4 as seed ortholog is 100%.

Group of orthologs #1100. Best score 560 bits
Score difference with first non-orthologous sequence - C.intestinalis:560 G.gallus:560

F6UG35              	100.00%		E1C049              	100.00%
                    	       		E1C377              	51.26%
Bootstrap support for F6UG35 as seed ortholog is 100%.
Bootstrap support for E1C049 as seed ortholog is 100%.

Group of orthologs #1101. Best score 560 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 G.gallus:560

F6R5L0              	100.00%		F1NIP5              	100.00%
                    	       		Q5ZI49              	39.29%
Bootstrap support for F6R5L0 as seed ortholog is 100%.
Bootstrap support for F1NIP5 as seed ortholog is 100%.

Group of orthologs #1102. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:559 G.gallus:166

F7ABT2              	100.00%		E1BST4              	100.00%
                    	       		F1NYZ6              	12.43%
                    	       		F1P2X8              	12.08%
                    	       		F1N804              	10.46%
                    	       		F1NZB0              	6.31%
Bootstrap support for F7ABT2 as seed ortholog is 100%.
Bootstrap support for E1BST4 as seed ortholog is 99%.

Group of orthologs #1103. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 G.gallus:413

F6VJT7              	100.00%		F1P0K5              	100.00%
F7BLJ0              	6.44%		E1BUT2              	10.32%
Bootstrap support for F6VJT7 as seed ortholog is 98%.
Bootstrap support for F1P0K5 as seed ortholog is 100%.

Group of orthologs #1104. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:559 G.gallus:281

F7A9K4              	100.00%		E1C2N5              	100.00%
Bootstrap support for F7A9K4 as seed ortholog is 100%.
Bootstrap support for E1C2N5 as seed ortholog is 100%.

Group of orthologs #1105. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:559 G.gallus:559

F6PHE6              	100.00%		Q5ZK40              	100.00%
Bootstrap support for F6PHE6 as seed ortholog is 100%.
Bootstrap support for Q5ZK40 as seed ortholog is 100%.

Group of orthologs #1106. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:559 G.gallus:559

F6YIL9              	100.00%		F1P112              	100.00%
Bootstrap support for F6YIL9 as seed ortholog is 100%.
Bootstrap support for F1P112 as seed ortholog is 100%.

Group of orthologs #1107. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 G.gallus:558

F6VVE9              	100.00%		Q5ZM55              	100.00%
                    	       		F1NZR5              	66.29%
Bootstrap support for F6VVE9 as seed ortholog is 100%.
Bootstrap support for Q5ZM55 as seed ortholog is 100%.

Group of orthologs #1108. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 G.gallus:558

F7AEY7              	100.00%		F1NJQ7              	100.00%
Bootstrap support for F7AEY7 as seed ortholog is 100%.
Bootstrap support for F1NJQ7 as seed ortholog is 100%.

Group of orthologs #1109. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:557 G.gallus:261

F6ZL94              	100.00%		F1NFM3              	100.00%
                    	       		E1C6W8              	18.91%
Bootstrap support for F6ZL94 as seed ortholog is 100%.
Bootstrap support for F1NFM3 as seed ortholog is 100%.

Group of orthologs #1110. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 G.gallus:557

F6ZYI6              	100.00%		Q5ZIE6              	100.00%
                    	       		H9L1Q5              	89.02%
Bootstrap support for F6ZYI6 as seed ortholog is 100%.
Bootstrap support for Q5ZIE6 as seed ortholog is 100%.

Group of orthologs #1111. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:557 G.gallus:557

F6SIN5              	100.00%		F1NJE0              	100.00%
Bootstrap support for F6SIN5 as seed ortholog is 100%.
Bootstrap support for F1NJE0 as seed ortholog is 100%.

Group of orthologs #1112. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:557 G.gallus:249

F7AHK4              	100.00%		F1NXP0              	100.00%
Bootstrap support for F7AHK4 as seed ortholog is 100%.
Bootstrap support for F1NXP0 as seed ortholog is 100%.

Group of orthologs #1113. Best score 556 bits
Score difference with first non-orthologous sequence - C.intestinalis:556 G.gallus:556

F6X0V6              	100.00%		E1BZM9              	100.00%
Bootstrap support for F6X0V6 as seed ortholog is 100%.
Bootstrap support for E1BZM9 as seed ortholog is 100%.

Group of orthologs #1114. Best score 556 bits
Score difference with first non-orthologous sequence - C.intestinalis:556 G.gallus:556

F7AWI9              	100.00%		Q5ZKJ5              	100.00%
Bootstrap support for F7AWI9 as seed ortholog is 100%.
Bootstrap support for Q5ZKJ5 as seed ortholog is 100%.

Group of orthologs #1115. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 G.gallus:119

F6YJ55              	100.00%		F1ND99              	100.00%
F6YJ69              	36.88%		F1NX29              	25.32%
Bootstrap support for F6YJ55 as seed ortholog is 97%.
Bootstrap support for F1ND99 as seed ortholog is 99%.

Group of orthologs #1116. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 G.gallus:555

F6QEV0              	100.00%		E1BR28              	100.00%
                    	       		E1BS79              	20.18%
Bootstrap support for F6QEV0 as seed ortholog is 100%.
Bootstrap support for E1BR28 as seed ortholog is 100%.

Group of orthologs #1117. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 G.gallus:306

F6SR69              	100.00%		Q1XA76              	100.00%
                    	       		H9L3S2              	53.14%
Bootstrap support for F6SR69 as seed ortholog is 100%.
Bootstrap support for Q1XA76 as seed ortholog is 100%.

Group of orthologs #1118. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 G.gallus:554

F6VWV8              	100.00%		E1C5M0              	100.00%
                    	       		E1BZ06              	14.16%
Bootstrap support for F6VWV8 as seed ortholog is 100%.
Bootstrap support for E1C5M0 as seed ortholog is 100%.

Group of orthologs #1119. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:554 G.gallus:66

F6SHN0              	100.00%		F1NEX5              	100.00%
F6TSK2              	38.61%		
Bootstrap support for F6SHN0 as seed ortholog is 100%.
Bootstrap support for F1NEX5 as seed ortholog is 92%.

Group of orthologs #1120. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:554 G.gallus:554

F6WLN1              	100.00%		F1N9H0              	100.00%
                    	       		Q9IAM7              	95.87%
Bootstrap support for F6WLN1 as seed ortholog is 100%.
Bootstrap support for F1N9H0 as seed ortholog is 100%.

Group of orthologs #1121. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 G.gallus:346

F6Z0V8              	100.00%		E1BS78              	100.00%
Bootstrap support for F6Z0V8 as seed ortholog is 100%.
Bootstrap support for E1BS78 as seed ortholog is 100%.

Group of orthologs #1122. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:17

F6X7T3              	100.00%		E1C1P8              	100.00%
Bootstrap support for F6X7T3 as seed ortholog is 99%.
Bootstrap support for E1C1P8 as seed ortholog is 64%.
Alternative seed ortholog is E1C7B5 (17 bits away from this cluster)

Group of orthologs #1123. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 G.gallus:554

F7B8M0              	100.00%		E1BS58              	100.00%
Bootstrap support for F7B8M0 as seed ortholog is 100%.
Bootstrap support for E1BS58 as seed ortholog is 100%.

Group of orthologs #1124. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:553 G.gallus:553

F6TT57              	100.00%		F1NBV7              	100.00%
Bootstrap support for F6TT57 as seed ortholog is 100%.
Bootstrap support for F1NBV7 as seed ortholog is 100%.

Group of orthologs #1125. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:553 G.gallus:460

H2XVF8              	100.00%		E1BWY7              	100.00%
Bootstrap support for H2XVF8 as seed ortholog is 100%.
Bootstrap support for E1BWY7 as seed ortholog is 100%.

Group of orthologs #1126. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:553 G.gallus:553

F6S9F0              	100.00%		Q5ZMK5              	100.00%
Bootstrap support for F6S9F0 as seed ortholog is 100%.
Bootstrap support for Q5ZMK5 as seed ortholog is 100%.

Group of orthologs #1127. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:452 G.gallus:553

H2Y2U9              	100.00%		F1NGS0              	100.00%
Bootstrap support for H2Y2U9 as seed ortholog is 100%.
Bootstrap support for F1NGS0 as seed ortholog is 100%.

Group of orthologs #1128. Best score 552 bits
Score difference with first non-orthologous sequence - C.intestinalis:552 G.gallus:552

F6V934              	100.00%		E1C7D4              	100.00%
                    	       		E1C7L0              	100.00%
                    	       		Q5ZMM8              	38.32%
Bootstrap support for F6V934 as seed ortholog is 100%.
Bootstrap support for E1C7D4 as seed ortholog is 100%.
Bootstrap support for E1C7L0 as seed ortholog is 100%.

Group of orthologs #1129. Best score 552 bits
Score difference with first non-orthologous sequence - C.intestinalis:552 G.gallus:552

F6PPP3              	100.00%		F1P1U8              	100.00%
Bootstrap support for F6PPP3 as seed ortholog is 100%.
Bootstrap support for F1P1U8 as seed ortholog is 100%.

Group of orthologs #1130. Best score 552 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 G.gallus:378

F6SDQ3              	100.00%		F1NYX0              	100.00%
Bootstrap support for F6SDQ3 as seed ortholog is 100%.
Bootstrap support for F1NYX0 as seed ortholog is 100%.

Group of orthologs #1131. Best score 552 bits
Score difference with first non-orthologous sequence - C.intestinalis:552 G.gallus:552

F7A9M5              	100.00%		F1NSG7              	100.00%
Bootstrap support for F7A9M5 as seed ortholog is 100%.
Bootstrap support for F1NSG7 as seed ortholog is 100%.

Group of orthologs #1132. Best score 551 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 G.gallus:397

F6U7X2              	100.00%		F1ND21              	100.00%
                    	       		H9KYX1              	22.02%
                    	       		Q5ZJ58              	18.96%
Bootstrap support for F6U7X2 as seed ortholog is 100%.
Bootstrap support for F1ND21 as seed ortholog is 100%.

Group of orthologs #1133. Best score 551 bits
Score difference with first non-orthologous sequence - C.intestinalis:551 G.gallus:551

F7B2Q7              	100.00%		E1C2U6              	100.00%
                    	       		Q5ZM91              	55.02%
Bootstrap support for F7B2Q7 as seed ortholog is 100%.
Bootstrap support for E1C2U6 as seed ortholog is 100%.

Group of orthologs #1134. Best score 551 bits
Score difference with first non-orthologous sequence - C.intestinalis:551 G.gallus:551

F6QI37              	100.00%		F1NIK3              	100.00%
Bootstrap support for F6QI37 as seed ortholog is 100%.
Bootstrap support for F1NIK3 as seed ortholog is 100%.

Group of orthologs #1135. Best score 551 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 G.gallus:551

F6SUS9              	100.00%		F1NFD9              	100.00%
Bootstrap support for F6SUS9 as seed ortholog is 100%.
Bootstrap support for F1NFD9 as seed ortholog is 100%.

Group of orthologs #1136. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 G.gallus:550

F7B0A7              	100.00%		P11009              	100.00%
                    	       		P70079              	48.87%
                    	       		F1NXR0              	43.04%
Bootstrap support for F7B0A7 as seed ortholog is 100%.
Bootstrap support for P11009 as seed ortholog is 100%.

Group of orthologs #1137. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:550 G.gallus:419

F6VTM3              	100.00%		F1NLE6              	100.00%
Bootstrap support for F6VTM3 as seed ortholog is 100%.
Bootstrap support for F1NLE6 as seed ortholog is 100%.

Group of orthologs #1138. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:550 G.gallus:550

F6YGJ1              	100.00%		Q6IVA4              	100.00%
Bootstrap support for F6YGJ1 as seed ortholog is 100%.
Bootstrap support for Q6IVA4 as seed ortholog is 100%.

Group of orthologs #1139. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 G.gallus:231

Q4H3L5              	100.00%		F1P066              	100.00%
Bootstrap support for Q4H3L5 as seed ortholog is 100%.
Bootstrap support for F1P066 as seed ortholog is 100%.

Group of orthologs #1140. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:430

F6W122              	100.00%		F1NN37              	100.00%
                    	       		F1NWA7              	42.05%
Bootstrap support for F6W122 as seed ortholog is 99%.
Bootstrap support for F1NN37 as seed ortholog is 100%.

Group of orthologs #1141. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 G.gallus:441

F6W841              	100.00%		Q04982              	100.00%
                    	       		P05625              	12.21%
Bootstrap support for F6W841 as seed ortholog is 100%.
Bootstrap support for Q04982 as seed ortholog is 100%.

Group of orthologs #1142. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 G.gallus:408

F6TZD9              	100.00%		E1BTA8              	100.00%
Bootstrap support for F6TZD9 as seed ortholog is 100%.
Bootstrap support for E1BTA8 as seed ortholog is 100%.

Group of orthologs #1143. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 G.gallus:549

F6SAH8              	100.00%		F1NCC1              	100.00%
Bootstrap support for F6SAH8 as seed ortholog is 100%.
Bootstrap support for F1NCC1 as seed ortholog is 100%.

Group of orthologs #1144. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 G.gallus:215

F6TUU8              	100.00%		F1NHD9              	100.00%
Bootstrap support for F6TUU8 as seed ortholog is 100%.
Bootstrap support for F1NHD9 as seed ortholog is 100%.

Group of orthologs #1145. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:96

F6SML2              	100.00%		Q5F3B5              	100.00%
Bootstrap support for F6SML2 as seed ortholog is 100%.
Bootstrap support for Q5F3B5 as seed ortholog is 99%.

Group of orthologs #1146. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 G.gallus:396

F6VKA0              	100.00%		Q5ZJ49              	100.00%
Bootstrap support for F6VKA0 as seed ortholog is 100%.
Bootstrap support for Q5ZJ49 as seed ortholog is 100%.

Group of orthologs #1147. Best score 549 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 G.gallus:549

F6WWH2              	100.00%		Q5ZJ43              	100.00%
Bootstrap support for F6WWH2 as seed ortholog is 100%.
Bootstrap support for Q5ZJ43 as seed ortholog is 100%.

Group of orthologs #1148. Best score 548 bits
Score difference with first non-orthologous sequence - C.intestinalis:548 G.gallus:548

F6QLM7              	100.00%		Q5ZLC3              	100.00%
Bootstrap support for F6QLM7 as seed ortholog is 100%.
Bootstrap support for Q5ZLC3 as seed ortholog is 100%.

Group of orthologs #1149. Best score 548 bits
Score difference with first non-orthologous sequence - C.intestinalis:548 G.gallus:548

F6YAH3              	100.00%		F1NY59              	100.00%
Bootstrap support for F6YAH3 as seed ortholog is 100%.
Bootstrap support for F1NY59 as seed ortholog is 100%.

Group of orthologs #1150. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 G.gallus:491

F6QRJ2              	100.00%		E1BR89              	100.00%
Bootstrap support for F6QRJ2 as seed ortholog is 100%.
Bootstrap support for E1BR89 as seed ortholog is 100%.

Group of orthologs #1151. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 G.gallus:547

F6XUD5              	100.00%		E1BQI0              	100.00%
Bootstrap support for F6XUD5 as seed ortholog is 97%.
Bootstrap support for E1BQI0 as seed ortholog is 100%.

Group of orthologs #1152. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:547 G.gallus:547

F6YV51              	100.00%		E1C6M5              	100.00%
Bootstrap support for F6YV51 as seed ortholog is 100%.
Bootstrap support for E1C6M5 as seed ortholog is 100%.

Group of orthologs #1153. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:547 G.gallus:547

F6SM47              	100.00%		P48440              	100.00%
Bootstrap support for F6SM47 as seed ortholog is 100%.
Bootstrap support for P48440 as seed ortholog is 100%.

Group of orthologs #1154. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 G.gallus:547

F6TMN3              	100.00%		Q5ZJV0              	100.00%
Bootstrap support for F6TMN3 as seed ortholog is 100%.
Bootstrap support for Q5ZJV0 as seed ortholog is 100%.

Group of orthologs #1155. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:547 G.gallus:547

H2XP55              	100.00%		F1P1V8              	100.00%
Bootstrap support for H2XP55 as seed ortholog is 100%.
Bootstrap support for F1P1V8 as seed ortholog is 100%.

Group of orthologs #1156. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 G.gallus:494

H2Y2K5              	100.00%		F1NPI7              	100.00%
F6VXL3              	7.51%		
Bootstrap support for H2Y2K5 as seed ortholog is 100%.
Bootstrap support for F1NPI7 as seed ortholog is 100%.

Group of orthologs #1157. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:546 G.gallus:546

F6WWX5              	100.00%		E1BT75              	100.00%
Bootstrap support for F6WWX5 as seed ortholog is 100%.
Bootstrap support for E1BT75 as seed ortholog is 100%.

Group of orthologs #1158. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:546 G.gallus:546

F6XT75              	100.00%		E1C982              	100.00%
Bootstrap support for F6XT75 as seed ortholog is 100%.
Bootstrap support for E1C982 as seed ortholog is 100%.

Group of orthologs #1159. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:546 G.gallus:546

F6TCF1              	100.00%		F1NXV1              	100.00%
Bootstrap support for F6TCF1 as seed ortholog is 100%.
Bootstrap support for F1NXV1 as seed ortholog is 100%.

Group of orthologs #1160. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:546 G.gallus:484

F6WLA0              	100.00%		F1P299              	100.00%
Bootstrap support for F6WLA0 as seed ortholog is 100%.
Bootstrap support for F1P299 as seed ortholog is 100%.

Group of orthologs #1161. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 G.gallus:545

F6REB5              	100.00%		F1N8D0              	100.00%
                    	       		F1NL67              	53.05%
Bootstrap support for F6REB5 as seed ortholog is 100%.
Bootstrap support for F1N8D0 as seed ortholog is 100%.

Group of orthologs #1162. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 G.gallus:545

F6X413              	100.00%		F1NC30              	100.00%
                    	       		F1NYY2              	36.31%
Bootstrap support for F6X413 as seed ortholog is 100%.
Bootstrap support for F1NC30 as seed ortholog is 100%.

Group of orthologs #1163. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 G.gallus:335

F6WPZ9              	100.00%		F1NIM0              	100.00%
                    	       		Q5YCC5              	100.00%
Bootstrap support for F6WPZ9 as seed ortholog is 100%.
Bootstrap support for F1NIM0 as seed ortholog is 100%.
Bootstrap support for Q5YCC5 as seed ortholog is 100%.

Group of orthologs #1164. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 G.gallus:545

F6ZP25              	100.00%		E1BQU2              	100.00%
Bootstrap support for F6ZP25 as seed ortholog is 100%.
Bootstrap support for E1BQU2 as seed ortholog is 100%.

Group of orthologs #1165. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 G.gallus:545

F6X3S3              	100.00%		Q5ZK01              	100.00%
Bootstrap support for F6X3S3 as seed ortholog is 100%.
Bootstrap support for Q5ZK01 as seed ortholog is 100%.

Group of orthologs #1166. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 G.gallus:365

F6UD02              	100.00%		E1BRM9              	100.00%
                    	       		F1NCH4              	59.66%
Bootstrap support for F6UD02 as seed ortholog is 100%.
Bootstrap support for E1BRM9 as seed ortholog is 100%.

Group of orthologs #1167. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 G.gallus:544

F7BA39              	100.00%		F1P2G2              	100.00%
                    	       		E1C8N9              	22.40%
Bootstrap support for F7BA39 as seed ortholog is 100%.
Bootstrap support for F1P2G2 as seed ortholog is 100%.

Group of orthologs #1168. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 G.gallus:81

H2Y369              	100.00%		F1NA00              	100.00%
                    	       		E1BTC0              	19.12%
Bootstrap support for H2Y369 as seed ortholog is 57%.
Alternative seed ortholog is F7AHM9 (10 bits away from this cluster)
Bootstrap support for F1NA00 as seed ortholog is 90%.

Group of orthologs #1169. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 G.gallus:435

F7A6C5              	100.00%		Q90623              	100.00%
                    	       		F1NU91              	10.35%
Bootstrap support for F7A6C5 as seed ortholog is 100%.
Bootstrap support for Q90623 as seed ortholog is 100%.

Group of orthologs #1170. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 G.gallus:544

F6U3Q1              	100.00%		F1N903              	100.00%
Bootstrap support for F6U3Q1 as seed ortholog is 100%.
Bootstrap support for F1N903 as seed ortholog is 100%.

Group of orthologs #1171. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 G.gallus:544

F6V6S0              	100.00%		F1NPS4              	100.00%
Bootstrap support for F6V6S0 as seed ortholog is 100%.
Bootstrap support for F1NPS4 as seed ortholog is 100%.

Group of orthologs #1172. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 G.gallus:544

F6YQR4              	100.00%		F1NV71              	100.00%
Bootstrap support for F6YQR4 as seed ortholog is 100%.
Bootstrap support for F1NV71 as seed ortholog is 100%.

Group of orthologs #1173. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 G.gallus:543

F6ZVE7              	100.00%		P23228              	100.00%
                    	       		E1C9C4              	12.65%
Bootstrap support for F6ZVE7 as seed ortholog is 100%.
Bootstrap support for P23228 as seed ortholog is 100%.

Group of orthologs #1174. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 G.gallus:543

F6S399              	100.00%		E1BVJ5              	100.00%
Bootstrap support for F6S399 as seed ortholog is 100%.
Bootstrap support for E1BVJ5 as seed ortholog is 100%.

Group of orthologs #1175. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 G.gallus:543

F6XUA1              	100.00%		F1P5D4              	100.00%
Bootstrap support for F6XUA1 as seed ortholog is 100%.
Bootstrap support for F1P5D4 as seed ortholog is 100%.

Group of orthologs #1176. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:272

F6XNC0              	100.00%		P26007              	100.00%
Bootstrap support for F6XNC0 as seed ortholog is 89%.
Bootstrap support for P26007 as seed ortholog is 99%.

Group of orthologs #1177. Best score 542 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 G.gallus:325

H2XQB4              	100.00%		F1NFN0              	100.00%
                    	       		D2X2H2              	57.00%
                    	       		F1NRD5              	40.83%
Bootstrap support for H2XQB4 as seed ortholog is 100%.
Bootstrap support for F1NFN0 as seed ortholog is 100%.

Group of orthologs #1178. Best score 542 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 G.gallus:34

F6YP78              	100.00%		E1BT87              	100.00%
F6WN12              	47.65%		
Bootstrap support for F6YP78 as seed ortholog is 95%.
Bootstrap support for E1BT87 as seed ortholog is 81%.

Group of orthologs #1179. Best score 542 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 G.gallus:480

F6TTI3              	100.00%		E1C4M6              	100.00%
Bootstrap support for F6TTI3 as seed ortholog is 100%.
Bootstrap support for E1C4M6 as seed ortholog is 100%.

Group of orthologs #1180. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 G.gallus:541

F6TJL2              	100.00%		E1C5S8              	100.00%
Bootstrap support for F6TJL2 as seed ortholog is 98%.
Bootstrap support for E1C5S8 as seed ortholog is 100%.

Group of orthologs #1181. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 G.gallus:541

F6RSZ1              	100.00%		Q5ZL91              	100.00%
Bootstrap support for F6RSZ1 as seed ortholog is 100%.
Bootstrap support for Q5ZL91 as seed ortholog is 100%.

Group of orthologs #1182. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 G.gallus:173

F7BLL7              	100.00%		F1NLL2              	100.00%
Bootstrap support for F7BLL7 as seed ortholog is 100%.
Bootstrap support for F1NLL2 as seed ortholog is 99%.

Group of orthologs #1183. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 G.gallus:541

F6UF05              	100.00%		Q5ZJQ2              	100.00%
Bootstrap support for F6UF05 as seed ortholog is 100%.
Bootstrap support for Q5ZJQ2 as seed ortholog is 100%.

Group of orthologs #1184. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 G.gallus:312

F7A4A9              	100.00%		E1BZY7              	100.00%
                    	       		E1BUA1              	14.96%
                    	       		E1BQX7              	6.62%
Bootstrap support for F7A4A9 as seed ortholog is 100%.
Bootstrap support for E1BZY7 as seed ortholog is 100%.

Group of orthologs #1185. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 G.gallus:356

H2XZZ6              	100.00%		Q5ZMA7              	100.00%
                    	       		F1P0K4              	17.69%
                    	       		F1N8L1              	14.63%
Bootstrap support for H2XZZ6 as seed ortholog is 100%.
Bootstrap support for Q5ZMA7 as seed ortholog is 100%.

Group of orthologs #1186. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 G.gallus:540

F6VYZ5              	100.00%		F1NDK2              	100.00%
Bootstrap support for F6VYZ5 as seed ortholog is 100%.
Bootstrap support for F1NDK2 as seed ortholog is 100%.

Group of orthologs #1187. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 G.gallus:540

F6UVK0              	100.00%		Q5ZLJ6              	100.00%
Bootstrap support for F6UVK0 as seed ortholog is 100%.
Bootstrap support for Q5ZLJ6 as seed ortholog is 100%.

Group of orthologs #1188. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 G.gallus:3

F6XL13              	100.00%		O57405              	100.00%
F6SPL0              	55.73%		
Bootstrap support for F6XL13 as seed ortholog is 100%.
Bootstrap support for O57405 as seed ortholog is 53%.
Alternative seed ortholog is O93505 (3 bits away from this cluster)

Group of orthologs #1189. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 G.gallus:539

H2XLP3              	100.00%		E1C6N0              	100.00%
Bootstrap support for H2XLP3 as seed ortholog is 100%.
Bootstrap support for E1C6N0 as seed ortholog is 100%.

Group of orthologs #1190. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 G.gallus:539

F6W097              	100.00%		Q5F3N0              	100.00%
Bootstrap support for F6W097 as seed ortholog is 100%.
Bootstrap support for Q5F3N0 as seed ortholog is 100%.

Group of orthologs #1191. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 G.gallus:539

H2XXZ7              	100.00%		P00356              	100.00%
Bootstrap support for H2XXZ7 as seed ortholog is 100%.
Bootstrap support for P00356 as seed ortholog is 100%.

Group of orthologs #1192. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 G.gallus:262

F6WVW2              	100.00%		F1NUS6              	100.00%
                    	       		F1P5C5              	23.87%
                    	       		O42414              	10.38%
Bootstrap support for F6WVW2 as seed ortholog is 100%.
Bootstrap support for F1NUS6 as seed ortholog is 99%.

Group of orthologs #1193. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 G.gallus:538

F6XDI5              	100.00%		E1BVF8              	100.00%
                    	       		Q5ZHL0              	27.68%
Bootstrap support for F6XDI5 as seed ortholog is 100%.
Bootstrap support for E1BVF8 as seed ortholog is 100%.

Group of orthologs #1194. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 G.gallus:538

F6V9Y2              	100.00%		F1NG01              	100.00%
Bootstrap support for F6V9Y2 as seed ortholog is 100%.
Bootstrap support for F1NG01 as seed ortholog is 100%.

Group of orthologs #1195. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 G.gallus:422

H2XQR7              	100.00%		E1BV28              	100.00%
Bootstrap support for H2XQR7 as seed ortholog is 100%.
Bootstrap support for E1BV28 as seed ortholog is 100%.

Group of orthologs #1196. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 G.gallus:538

F6YK29              	100.00%		Q5ZL37              	100.00%
Bootstrap support for F6YK29 as seed ortholog is 100%.
Bootstrap support for Q5ZL37 as seed ortholog is 100%.

Group of orthologs #1197. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 G.gallus:537

F6RZH2              	100.00%		F1P4C0              	100.00%
                    	       		F1P486              	29.43%
Bootstrap support for F6RZH2 as seed ortholog is 100%.
Bootstrap support for F1P4C0 as seed ortholog is 100%.

Group of orthologs #1198. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 G.gallus:314

F6VPZ1              	100.00%		Q5ZKK5              	100.00%
                    	       		E1BSP2              	25.07%
Bootstrap support for F6VPZ1 as seed ortholog is 100%.
Bootstrap support for Q5ZKK5 as seed ortholog is 100%.

Group of orthologs #1199. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 G.gallus:312

F6QEZ7              	100.00%		E1BTZ2              	100.00%
Bootstrap support for F6QEZ7 as seed ortholog is 100%.
Bootstrap support for E1BTZ2 as seed ortholog is 100%.

Group of orthologs #1200. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 G.gallus:536

F6WQG9              	100.00%		E1BU99              	100.00%
Bootstrap support for F6WQG9 as seed ortholog is 100%.
Bootstrap support for E1BU99 as seed ortholog is 100%.

Group of orthologs #1201. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 G.gallus:261

F6W1D2              	100.00%		E1BZ64              	100.00%
Bootstrap support for F6W1D2 as seed ortholog is 100%.
Bootstrap support for E1BZ64 as seed ortholog is 100%.

Group of orthologs #1202. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 G.gallus:536

F6PG92              	100.00%		Q5ZJ23              	100.00%
Bootstrap support for F6PG92 as seed ortholog is 100%.
Bootstrap support for Q5ZJ23 as seed ortholog is 100%.

Group of orthologs #1203. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 G.gallus:535

F6WCA3              	100.00%		F1NG51              	100.00%
                    	       		F1NF39              	24.77%
Bootstrap support for F6WCA3 as seed ortholog is 100%.
Bootstrap support for F1NG51 as seed ortholog is 100%.

Group of orthologs #1204. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 G.gallus:23

F6PLF9              	100.00%		F1P4X3              	100.00%
F7A4H3              	21.21%		
Bootstrap support for F6PLF9 as seed ortholog is 93%.
Bootstrap support for F1P4X3 as seed ortholog is 68%.
Alternative seed ortholog is E1BS94 (23 bits away from this cluster)

Group of orthologs #1205. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 G.gallus:535

F7BBJ9              	100.00%		F1N823              	100.00%
Bootstrap support for F7BBJ9 as seed ortholog is 100%.
Bootstrap support for F1N823 as seed ortholog is 100%.

Group of orthologs #1206. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 G.gallus:535

F6SXA9              	100.00%		Q92076              	100.00%
Bootstrap support for F6SXA9 as seed ortholog is 100%.
Bootstrap support for Q92076 as seed ortholog is 100%.

Group of orthologs #1207. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 G.gallus:534

H2XME0              	100.00%		Q2KN97              	100.00%
                    	       		E1BVU7              	11.18%
Bootstrap support for H2XME0 as seed ortholog is 100%.
Bootstrap support for Q2KN97 as seed ortholog is 100%.

Group of orthologs #1208. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 G.gallus:270

F6YS67              	100.00%		F1N991              	100.00%
Bootstrap support for F6YS67 as seed ortholog is 100%.
Bootstrap support for F1N991 as seed ortholog is 100%.

Group of orthologs #1209. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 G.gallus:534

H2XUV6              	100.00%		E1C7Y1              	100.00%
Bootstrap support for H2XUV6 as seed ortholog is 100%.
Bootstrap support for E1C7Y1 as seed ortholog is 100%.

Group of orthologs #1210. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 G.gallus:226

F7A2K6              	100.00%		F1NVY4              	100.00%
Bootstrap support for F7A2K6 as seed ortholog is 99%.
Bootstrap support for F1NVY4 as seed ortholog is 100%.

Group of orthologs #1211. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 G.gallus:534

F6ZJF3              	100.00%		F1P2X2              	100.00%
Bootstrap support for F6ZJF3 as seed ortholog is 100%.
Bootstrap support for F1P2X2 as seed ortholog is 100%.

Group of orthologs #1212. Best score 533 bits
Score difference with first non-orthologous sequence - C.intestinalis:533 G.gallus:533

F7AV11              	100.00%		F1NY89              	100.00%
                    	       		F1NFZ9              	14.90%
Bootstrap support for F7AV11 as seed ortholog is 100%.
Bootstrap support for F1NY89 as seed ortholog is 100%.

Group of orthologs #1213. Best score 533 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 G.gallus:249

F6UR25              	100.00%		E1C3W7              	100.00%
Bootstrap support for F6UR25 as seed ortholog is 50%.
Alternative seed ortholog is F6ZFS8 (4 bits away from this cluster)
Bootstrap support for E1C3W7 as seed ortholog is 100%.

Group of orthologs #1214. Best score 533 bits
Score difference with first non-orthologous sequence - C.intestinalis:533 G.gallus:533

F6TJS8              	100.00%		E1C8Q4              	100.00%
Bootstrap support for F6TJS8 as seed ortholog is 100%.
Bootstrap support for E1C8Q4 as seed ortholog is 100%.

Group of orthologs #1215. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 G.gallus:278

H2XVD0              	100.00%		E1BVR1              	100.00%
                    	       		F1NRD6              	41.12%
Bootstrap support for H2XVD0 as seed ortholog is 100%.
Bootstrap support for E1BVR1 as seed ortholog is 100%.

Group of orthologs #1216. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 G.gallus:532

H2XW46              	100.00%		E1C409              	100.00%
H2XPW9              	12.52%		
Bootstrap support for H2XW46 as seed ortholog is 100%.
Bootstrap support for E1C409 as seed ortholog is 100%.

Group of orthologs #1217. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 G.gallus:532

F6U222              	100.00%		E1C4E4              	100.00%
Bootstrap support for F6U222 as seed ortholog is 100%.
Bootstrap support for E1C4E4 as seed ortholog is 100%.

Group of orthologs #1218. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 G.gallus:532

F6XSG2              	100.00%		E1C1J4              	100.00%
Bootstrap support for F6XSG2 as seed ortholog is 100%.
Bootstrap support for E1C1J4 as seed ortholog is 100%.

Group of orthologs #1219. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 G.gallus:532

Q1RPV0              	100.00%		E1BZ42              	100.00%
Bootstrap support for Q1RPV0 as seed ortholog is 100%.
Bootstrap support for E1BZ42 as seed ortholog is 100%.

Group of orthologs #1220. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 G.gallus:126

F6UW56              	100.00%		Q9DGG6              	100.00%
Bootstrap support for F6UW56 as seed ortholog is 100%.
Bootstrap support for Q9DGG6 as seed ortholog is 96%.

Group of orthologs #1221. Best score 531 bits
Score difference with first non-orthologous sequence - C.intestinalis:531 G.gallus:531

H2Y2M6              	100.00%		E1C1J5              	100.00%
H2XK55              	72.71%		
Bootstrap support for H2Y2M6 as seed ortholog is 100%.
Bootstrap support for E1C1J5 as seed ortholog is 100%.

Group of orthologs #1222. Best score 531 bits
Score difference with first non-orthologous sequence - C.intestinalis:531 G.gallus:226

F6RBW8              	100.00%		P09102              	100.00%
Bootstrap support for F6RBW8 as seed ortholog is 100%.
Bootstrap support for P09102 as seed ortholog is 100%.

Group of orthologs #1223. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 G.gallus:275

H2XK85              	100.00%		F1NZJ8              	100.00%
H2XLI5              	35.14%		
Bootstrap support for H2XK85 as seed ortholog is 100%.
Bootstrap support for F1NZJ8 as seed ortholog is 100%.

Group of orthologs #1224. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 G.gallus:530

F6ZGK8              	100.00%		E1BTW1              	100.00%
Bootstrap support for F6ZGK8 as seed ortholog is 100%.
Bootstrap support for E1BTW1 as seed ortholog is 100%.

Group of orthologs #1225. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 G.gallus:530

H2XL40              	100.00%		E1BYG5              	100.00%
Bootstrap support for H2XL40 as seed ortholog is 100%.
Bootstrap support for E1BYG5 as seed ortholog is 100%.

Group of orthologs #1226. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 G.gallus:452

F6VM60              	100.00%		F1P2A9              	100.00%
Bootstrap support for F6VM60 as seed ortholog is 100%.
Bootstrap support for F1P2A9 as seed ortholog is 100%.

Group of orthologs #1227. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 G.gallus:529

F6UVC2              	100.00%		E1BW24              	100.00%
                    	       		E1C1Z8              	17.93%
Bootstrap support for F6UVC2 as seed ortholog is 100%.
Bootstrap support for E1BW24 as seed ortholog is 100%.

Group of orthologs #1228. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 G.gallus:529

F6U7M8              	100.00%		E1C5C6              	100.00%
                    	       		E1C571              	26.85%
Bootstrap support for F6U7M8 as seed ortholog is 100%.
Bootstrap support for E1C5C6 as seed ortholog is 100%.

Group of orthologs #1229. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 G.gallus:529

F6W673              	100.00%		E1C1A1              	100.00%
Bootstrap support for F6W673 as seed ortholog is 100%.
Bootstrap support for E1C1A1 as seed ortholog is 100%.

Group of orthologs #1230. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 G.gallus:529

F6UH30              	100.00%		F1NK15              	100.00%
Bootstrap support for F6UH30 as seed ortholog is 100%.
Bootstrap support for F1NK15 as seed ortholog is 100%.

Group of orthologs #1231. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 G.gallus:529

F6UIA2              	100.00%		Q5ZIB9              	100.00%
Bootstrap support for F6UIA2 as seed ortholog is 100%.
Bootstrap support for Q5ZIB9 as seed ortholog is 100%.

Group of orthologs #1232. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 G.gallus:529

F7AX15              	100.00%		Q9W770              	100.00%
Bootstrap support for F7AX15 as seed ortholog is 100%.
Bootstrap support for Q9W770 as seed ortholog is 100%.

Group of orthologs #1233. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 G.gallus:528

F6XEQ3              	100.00%		E1C152              	100.00%
                    	       		E1BW66              	14.69%
                    	       		E1BS98              	13.78%
Bootstrap support for F6XEQ3 as seed ortholog is 100%.
Bootstrap support for E1C152 as seed ortholog is 100%.

Group of orthologs #1234. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 G.gallus:383

F6RZA6              	100.00%		F1NP98              	100.00%
Bootstrap support for F6RZA6 as seed ortholog is 100%.
Bootstrap support for F1NP98 as seed ortholog is 100%.

Group of orthologs #1235. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 G.gallus:528

F6XLS2              	100.00%		F1P051              	100.00%
Bootstrap support for F6XLS2 as seed ortholog is 100%.
Bootstrap support for F1P051 as seed ortholog is 100%.

Group of orthologs #1236. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 G.gallus:528

H2XUA5              	100.00%		F1P266              	100.00%
Bootstrap support for H2XUA5 as seed ortholog is 100%.
Bootstrap support for F1P266 as seed ortholog is 100%.

Group of orthologs #1237. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 G.gallus:528

F7BK08              	100.00%		Q5ZIT9              	100.00%
Bootstrap support for F7BK08 as seed ortholog is 100%.
Bootstrap support for Q5ZIT9 as seed ortholog is 100%.

Group of orthologs #1238. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 G.gallus:400

F6Z5P6              	100.00%		E1BV90              	100.00%
F6ZTZ7              	55.51%		
Bootstrap support for F6Z5P6 as seed ortholog is 100%.
Bootstrap support for E1BV90 as seed ortholog is 100%.

Group of orthologs #1239. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 G.gallus:358

F6R9S1              	100.00%		F1NV40              	100.00%
                    	       		F1NHD2              	55.22%
Bootstrap support for F6R9S1 as seed ortholog is 100%.
Bootstrap support for F1NV40 as seed ortholog is 100%.

Group of orthologs #1240. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:527 G.gallus:267

F6YGN3              	100.00%		Q5ZME5              	100.00%
                    	       		F1P1I4              	37.56%
Bootstrap support for F6YGN3 as seed ortholog is 100%.
Bootstrap support for Q5ZME5 as seed ortholog is 100%.

Group of orthologs #1241. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:527 G.gallus:527

F6SSW4              	100.00%		E1BYY7              	100.00%
Bootstrap support for F6SSW4 as seed ortholog is 100%.
Bootstrap support for E1BYY7 as seed ortholog is 100%.

Group of orthologs #1242. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:527 G.gallus:527

F6X4W9              	100.00%		F1NNR1              	100.00%
Bootstrap support for F6X4W9 as seed ortholog is 100%.
Bootstrap support for F1NNR1 as seed ortholog is 100%.

Group of orthologs #1243. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 G.gallus:334

Q1RQ07              	100.00%		F1NEL8              	100.00%
Bootstrap support for Q1RQ07 as seed ortholog is 99%.
Bootstrap support for F1NEL8 as seed ortholog is 100%.

Group of orthologs #1244. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:526 G.gallus:526

F7AAA7              	100.00%		F1NCQ1              	100.00%
                    	       		Q5ZIK0              	13.26%
Bootstrap support for F7AAA7 as seed ortholog is 100%.
Bootstrap support for F1NCQ1 as seed ortholog is 100%.

Group of orthologs #1245. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:526 G.gallus:526

F6S7F2              	100.00%		F1P5G9              	100.00%
Bootstrap support for F6S7F2 as seed ortholog is 100%.
Bootstrap support for F1P5G9 as seed ortholog is 100%.

Group of orthologs #1246. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 G.gallus:215

F6SZT6              	100.00%		F1NDK7              	100.00%
                    	       		F1NDP3              	37.65%
Bootstrap support for F6SZT6 as seed ortholog is 92%.
Bootstrap support for F1NDK7 as seed ortholog is 99%.

Group of orthologs #1247. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 G.gallus:525

F6PYH8              	100.00%		P05083              	100.00%
                    	       		P02521              	77.18%
Bootstrap support for F6PYH8 as seed ortholog is 100%.
Bootstrap support for P05083 as seed ortholog is 100%.

Group of orthologs #1248. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 G.gallus:443

F6PQW9              	100.00%		E1C396              	100.00%
Bootstrap support for F6PQW9 as seed ortholog is 100%.
Bootstrap support for E1C396 as seed ortholog is 100%.

Group of orthologs #1249. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 G.gallus:225

F6S4Q0              	100.00%		E1C0Q5              	100.00%
Bootstrap support for F6S4Q0 as seed ortholog is 100%.
Bootstrap support for E1C0Q5 as seed ortholog is 100%.

Group of orthologs #1250. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 G.gallus:525

F6PY90              	100.00%		F1NFQ2              	100.00%
Bootstrap support for F6PY90 as seed ortholog is 100%.
Bootstrap support for F1NFQ2 as seed ortholog is 100%.

Group of orthologs #1251. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 G.gallus:525

H2Y164              	100.00%		F1NGM2              	100.00%
Bootstrap support for H2Y164 as seed ortholog is 100%.
Bootstrap support for F1NGM2 as seed ortholog is 100%.

Group of orthologs #1252. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 G.gallus:306

F6UIV5              	100.00%		F1NY28              	100.00%
                    	       		F1NC92              	24.47%
Bootstrap support for F6UIV5 as seed ortholog is 100%.
Bootstrap support for F1NY28 as seed ortholog is 100%.

Group of orthologs #1253. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 G.gallus:104

F6PKL5              	100.00%		Q5ZJV3              	100.00%
                    	       		F1NLH8              	27.65%
Bootstrap support for F6PKL5 as seed ortholog is 100%.
Bootstrap support for Q5ZJV3 as seed ortholog is 99%.

Group of orthologs #1254. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 G.gallus:524

F6YXW3              	100.00%		E1C9D4              	100.00%
Bootstrap support for F6YXW3 as seed ortholog is 100%.
Bootstrap support for E1C9D4 as seed ortholog is 100%.

Group of orthologs #1255. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 G.gallus:524

F7B0U3              	100.00%		E1C397              	100.00%
Bootstrap support for F7B0U3 as seed ortholog is 100%.
Bootstrap support for E1C397 as seed ortholog is 100%.

Group of orthologs #1256. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 G.gallus:524

F6R5G5              	100.00%		Q5F3I6              	100.00%
Bootstrap support for F6R5G5 as seed ortholog is 100%.
Bootstrap support for Q5F3I6 as seed ortholog is 100%.

Group of orthologs #1257. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 G.gallus:524

F6VZQ9              	100.00%		Q5ZK35              	100.00%
Bootstrap support for F6VZQ9 as seed ortholog is 100%.
Bootstrap support for Q5ZK35 as seed ortholog is 100%.

Group of orthologs #1258. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:523 G.gallus:523

F6SI87              	100.00%		F1NXC5              	100.00%
                    	       		F1P0Z6              	27.49%
Bootstrap support for F6SI87 as seed ortholog is 100%.
Bootstrap support for F1NXC5 as seed ortholog is 100%.

Group of orthologs #1259. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 G.gallus:122

F7ADD9              	100.00%		F1NEY6              	100.00%
                    	       		F1NYI0              	10.56%
Bootstrap support for F7ADD9 as seed ortholog is 84%.
Bootstrap support for F1NEY6 as seed ortholog is 98%.

Group of orthologs #1260. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:523 G.gallus:231

F6U8Z7              	100.00%		F1N8J0              	100.00%
Bootstrap support for F6U8Z7 as seed ortholog is 100%.
Bootstrap support for F1N8J0 as seed ortholog is 100%.

Group of orthologs #1261. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 G.gallus:264

F6TXF8              	100.00%		F1NEX3              	100.00%
Bootstrap support for F6TXF8 as seed ortholog is 84%.
Bootstrap support for F1NEX3 as seed ortholog is 99%.

Group of orthologs #1262. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 G.gallus:381

F7AXN3              	100.00%		F1NJ62              	100.00%
Bootstrap support for F7AXN3 as seed ortholog is 100%.
Bootstrap support for F1NJ62 as seed ortholog is 100%.

Group of orthologs #1263. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 G.gallus:522

F7A8T7              	100.00%		E1C581              	100.00%
                    	       		E1BV51              	5.74%
Bootstrap support for F7A8T7 as seed ortholog is 100%.
Bootstrap support for E1C581 as seed ortholog is 100%.

Group of orthologs #1264. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 G.gallus:522

F6S043              	100.00%		E1C011              	100.00%
Bootstrap support for F6S043 as seed ortholog is 100%.
Bootstrap support for E1C011 as seed ortholog is 100%.

Group of orthologs #1265. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 G.gallus:273

F6PKF9              	100.00%		E1C767              	100.00%
Bootstrap support for F6PKF9 as seed ortholog is 100%.
Bootstrap support for E1C767 as seed ortholog is 100%.

Group of orthologs #1266. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 G.gallus:522

F6TDZ5              	100.00%		E1BY65              	100.00%
Bootstrap support for F6TDZ5 as seed ortholog is 100%.
Bootstrap support for E1BY65 as seed ortholog is 100%.

Group of orthologs #1267. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 G.gallus:522

F6ZXB2              	100.00%		E1C8W8              	100.00%
Bootstrap support for F6ZXB2 as seed ortholog is 100%.
Bootstrap support for E1C8W8 as seed ortholog is 100%.

Group of orthologs #1268. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 G.gallus:522

F6WXF1              	100.00%		Q5ZM65              	100.00%
Bootstrap support for F6WXF1 as seed ortholog is 100%.
Bootstrap support for Q5ZM65 as seed ortholog is 100%.

Group of orthologs #1269. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 G.gallus:522

Q1RLG9              	100.00%		F1NLN1              	100.00%
Bootstrap support for Q1RLG9 as seed ortholog is 100%.
Bootstrap support for F1NLN1 as seed ortholog is 100%.

Group of orthologs #1270. Best score 521 bits
Score difference with first non-orthologous sequence - C.intestinalis:521 G.gallus:521

F6TGX2              	100.00%		F1NS59              	100.00%
Bootstrap support for F6TGX2 as seed ortholog is 100%.
Bootstrap support for F1NS59 as seed ortholog is 100%.

Group of orthologs #1271. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 G.gallus:395

F6VES6              	100.00%		F1NA70              	100.00%
F6W5K3              	5.15%		F1P548              	14.16%
Bootstrap support for F6VES6 as seed ortholog is 98%.
Bootstrap support for F1NA70 as seed ortholog is 100%.

Group of orthologs #1272. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 G.gallus:520

F6ZFJ9              	100.00%		E1C172              	100.00%
Bootstrap support for F6ZFJ9 as seed ortholog is 100%.
Bootstrap support for E1C172 as seed ortholog is 100%.

Group of orthologs #1273. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 G.gallus:442

F6SK29              	100.00%		P63247              	100.00%
Bootstrap support for F6SK29 as seed ortholog is 100%.
Bootstrap support for P63247 as seed ortholog is 100%.

Group of orthologs #1274. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 G.gallus:520

H2XRS3              	100.00%		E1C936              	100.00%
Bootstrap support for H2XRS3 as seed ortholog is 100%.
Bootstrap support for E1C936 as seed ortholog is 100%.

Group of orthologs #1275. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 G.gallus:520

F6Z3S5              	100.00%		F1P298              	100.00%
Bootstrap support for F6Z3S5 as seed ortholog is 100%.
Bootstrap support for F1P298 as seed ortholog is 100%.

Group of orthologs #1276. Best score 519 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 G.gallus:413

Q1RL93              	100.00%		F1P364              	100.00%
                    	       		E1C6V3              	33.78%
                    	       		F1NWT8              	10.01%
Bootstrap support for Q1RL93 as seed ortholog is 100%.
Bootstrap support for F1P364 as seed ortholog is 100%.

Group of orthologs #1277. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:78

F6SCX5              	100.00%		Q06900              	100.00%
                    	       		H9L0L7              	36.13%
                    	       		F1NC97              	26.95%
Bootstrap support for F6SCX5 as seed ortholog is 99%.
Bootstrap support for Q06900 as seed ortholog is 95%.

Group of orthologs #1278. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 G.gallus:263

F6RGG4              	100.00%		E1BS74              	100.00%
                    	       		F1NM72              	100.00%
Bootstrap support for F6RGG4 as seed ortholog is 100%.
Bootstrap support for E1BS74 as seed ortholog is 100%.
Bootstrap support for F1NM72 as seed ortholog is 100%.

Group of orthologs #1279. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:518 G.gallus:518

F6TLX8              	100.00%		E1BY08              	100.00%
Bootstrap support for F6TLX8 as seed ortholog is 100%.
Bootstrap support for E1BY08 as seed ortholog is 100%.

Group of orthologs #1280. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:518 G.gallus:518

F6Z6K5              	100.00%		E1C3H9              	100.00%
Bootstrap support for F6Z6K5 as seed ortholog is 100%.
Bootstrap support for E1C3H9 as seed ortholog is 100%.

Group of orthologs #1281. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 G.gallus:101

F6ZFE0              	100.00%		F1NLZ7              	100.00%
Bootstrap support for F6ZFE0 as seed ortholog is 100%.
Bootstrap support for F1NLZ7 as seed ortholog is 99%.

Group of orthologs #1282. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:517 G.gallus:373

F6QHM7              	100.00%		F1NSV9              	100.00%
Bootstrap support for F6QHM7 as seed ortholog is 100%.
Bootstrap support for F1NSV9 as seed ortholog is 100%.

Group of orthologs #1283. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 G.gallus:517

F6Z7E0              	100.00%		Q5ZIU8              	100.00%
Bootstrap support for F6Z7E0 as seed ortholog is 100%.
Bootstrap support for Q5ZIU8 as seed ortholog is 100%.

Group of orthologs #1284. Best score 516 bits
Score difference with first non-orthologous sequence - C.intestinalis:516 G.gallus:516

H2XTB8              	100.00%		Q5ZMW3              	100.00%
Bootstrap support for H2XTB8 as seed ortholog is 100%.
Bootstrap support for Q5ZMW3 as seed ortholog is 100%.

Group of orthologs #1285. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 G.gallus:515

F6U144              	100.00%		E1C7M8              	100.00%
                    	       		F1P359              	26.01%
Bootstrap support for F6U144 as seed ortholog is 100%.
Bootstrap support for E1C7M8 as seed ortholog is 100%.

Group of orthologs #1286. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 G.gallus:515

F7A7F8              	100.00%		F1N8U0              	100.00%
                    	       		F1P3B6              	20.52%
Bootstrap support for F7A7F8 as seed ortholog is 100%.
Bootstrap support for F1N8U0 as seed ortholog is 100%.

Group of orthologs #1287. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 G.gallus:428

F7AZV0              	100.00%		E1C7I0              	100.00%
Bootstrap support for F7AZV0 as seed ortholog is 100%.
Bootstrap support for E1C7I0 as seed ortholog is 100%.

Group of orthologs #1288. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 G.gallus:317

F6PP23              	100.00%		E1C246              	100.00%
                    	       		F1P409              	5.22%
Bootstrap support for F6PP23 as seed ortholog is 100%.
Bootstrap support for E1C246 as seed ortholog is 100%.

Group of orthologs #1289. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 G.gallus:423

H2XSA6              	100.00%		Q0WYX8              	100.00%
                    	       		F1NIA0              	29.18%
Bootstrap support for H2XSA6 as seed ortholog is 100%.
Bootstrap support for Q0WYX8 as seed ortholog is 100%.

Group of orthologs #1290. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 G.gallus:514

F6VHE0              	100.00%		E1BXX7              	100.00%
Bootstrap support for F6VHE0 as seed ortholog is 100%.
Bootstrap support for E1BXX7 as seed ortholog is 100%.

Group of orthologs #1291. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 G.gallus:514

F6RKR7              	100.00%		F1NBV3              	100.00%
Bootstrap support for F6RKR7 as seed ortholog is 100%.
Bootstrap support for F1NBV3 as seed ortholog is 100%.

Group of orthologs #1292. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 G.gallus:69

F6WY28              	100.00%		F1NEI2              	100.00%
Bootstrap support for F6WY28 as seed ortholog is 45%.
Alternative seed ortholog is H2Y1T7 (5 bits away from this cluster)
Bootstrap support for F1NEI2 as seed ortholog is 96%.

Group of orthologs #1293. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 G.gallus:467

F6UZU2              	100.00%		Q5ZKH3              	100.00%
Bootstrap support for F6UZU2 as seed ortholog is 100%.
Bootstrap support for Q5ZKH3 as seed ortholog is 100%.

Group of orthologs #1294. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:382

F6WZV6              	100.00%		F1N9K1              	100.00%
                    	       		F1NGZ9              	40.33%
                    	       		F1NLU5              	29.54%
Bootstrap support for F6WZV6 as seed ortholog is 99%.
Bootstrap support for F1N9K1 as seed ortholog is 100%.

Group of orthologs #1295. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:461 G.gallus:454

F6SML9              	100.00%		E1C3Q4              	100.00%
Bootstrap support for F6SML9 as seed ortholog is 100%.
Bootstrap support for E1C3Q4 as seed ortholog is 100%.

Group of orthologs #1296. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 G.gallus:512

F6RMT1              	100.00%		E1BX10              	100.00%
Bootstrap support for F6RMT1 as seed ortholog is 100%.
Bootstrap support for E1BX10 as seed ortholog is 100%.

Group of orthologs #1297. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 G.gallus:158

F6UAZ6              	100.00%		E1C8S8              	100.00%
Bootstrap support for F6UAZ6 as seed ortholog is 100%.
Bootstrap support for E1C8S8 as seed ortholog is 99%.

Group of orthologs #1298. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 G.gallus:420

F6ZUV7              	100.00%		Q8AY65              	100.00%
Bootstrap support for F6ZUV7 as seed ortholog is 100%.
Bootstrap support for Q8AY65 as seed ortholog is 100%.

Group of orthologs #1299. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:511 G.gallus:511

H2XX22              	100.00%		E1C5T7              	100.00%
                    	       		F1NE04              	25.17%
                    	       		F1P5N1              	23.18%
Bootstrap support for H2XX22 as seed ortholog is 100%.
Bootstrap support for E1C5T7 as seed ortholog is 100%.

Group of orthologs #1300. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 G.gallus:511

F7B1X4              	100.00%		Q5ZI36              	100.00%
Bootstrap support for F7B1X4 as seed ortholog is 100%.
Bootstrap support for Q5ZI36 as seed ortholog is 100%.

Group of orthologs #1301. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:511 G.gallus:511

H2XWZ0              	100.00%		Q5ZJJ2              	100.00%
Bootstrap support for H2XWZ0 as seed ortholog is 100%.
Bootstrap support for Q5ZJJ2 as seed ortholog is 100%.

Group of orthologs #1302. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 G.gallus:510

F6TEA0              	100.00%		Q5ZL26              	100.00%
                    	       		E1BYN9              	29.67%
Bootstrap support for F6TEA0 as seed ortholog is 100%.
Bootstrap support for Q5ZL26 as seed ortholog is 100%.

Group of orthologs #1303. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 G.gallus:510

F6QHG7              	100.00%		E1BVX9              	100.00%
Bootstrap support for F6QHG7 as seed ortholog is 100%.
Bootstrap support for E1BVX9 as seed ortholog is 100%.

Group of orthologs #1304. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 G.gallus:510

F6YLW1              	100.00%		E1C181              	100.00%
Bootstrap support for F6YLW1 as seed ortholog is 100%.
Bootstrap support for E1C181 as seed ortholog is 100%.

Group of orthologs #1305. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 G.gallus:433

F6X1K6              	100.00%		F1NZA9              	100.00%
Bootstrap support for F6X1K6 as seed ortholog is 100%.
Bootstrap support for F1NZA9 as seed ortholog is 100%.

Group of orthologs #1306. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:509 G.gallus:509

F6RDE8              	100.00%		E1C205              	100.00%
Bootstrap support for F6RDE8 as seed ortholog is 100%.
Bootstrap support for E1C205 as seed ortholog is 100%.

Group of orthologs #1307. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:509 G.gallus:509

F6UP98              	100.00%		E1BYX0              	100.00%
Bootstrap support for F6UP98 as seed ortholog is 100%.
Bootstrap support for E1BYX0 as seed ortholog is 100%.

Group of orthologs #1308. Best score 509 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 G.gallus:509

F6QI83              	100.00%		Q5ZLN4              	100.00%
Bootstrap support for F6QI83 as seed ortholog is 100%.
Bootstrap support for Q5ZLN4 as seed ortholog is 100%.

Group of orthologs #1309. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 G.gallus:508

F6VUM2              	100.00%		P16580              	100.00%
                    	       		F1P0D2              	38.70%
Bootstrap support for F6VUM2 as seed ortholog is 100%.
Bootstrap support for P16580 as seed ortholog is 100%.

Group of orthologs #1310. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 G.gallus:87

F6WYA1              	100.00%		P41239              	100.00%
                    	       		F1NMH8              	72.79%
Bootstrap support for F6WYA1 as seed ortholog is 100%.
Bootstrap support for P41239 as seed ortholog is 98%.

Group of orthologs #1311. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 G.gallus:410

H2XNK3              	100.00%		O42184              	100.00%
                    	       		E1BQI8              	17.44%
Bootstrap support for H2XNK3 as seed ortholog is 100%.
Bootstrap support for O42184 as seed ortholog is 100%.

Group of orthologs #1312. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 G.gallus:508

F7BEE9              	100.00%		F1NND8              	100.00%
Bootstrap support for F7BEE9 as seed ortholog is 100%.
Bootstrap support for F1NND8 as seed ortholog is 100%.

Group of orthologs #1313. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 G.gallus:508

H2XRG4              	100.00%		F1P1Z1              	100.00%
Bootstrap support for H2XRG4 as seed ortholog is 100%.
Bootstrap support for F1P1Z1 as seed ortholog is 100%.

Group of orthologs #1314. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 G.gallus:508

H2XRE3              	100.00%		Q5ZMV2              	100.00%
Bootstrap support for H2XRE3 as seed ortholog is 100%.
Bootstrap support for Q5ZMV2 as seed ortholog is 100%.

Group of orthologs #1315. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 G.gallus:381

F7AY24              	100.00%		F1NFY3              	100.00%
                    	       		E1BSY9              	33.99%
Bootstrap support for F7AY24 as seed ortholog is 100%.
Bootstrap support for F1NFY3 as seed ortholog is 100%.

Group of orthologs #1316. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 G.gallus:507

F6VAW2              	100.00%		F1NBB7              	100.00%
Bootstrap support for F6VAW2 as seed ortholog is 100%.
Bootstrap support for F1NBB7 as seed ortholog is 100%.

Group of orthologs #1317. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 G.gallus:142

F7B3K0              	100.00%		E1C5K5              	100.00%
Bootstrap support for F7B3K0 as seed ortholog is 100%.
Bootstrap support for E1C5K5 as seed ortholog is 100%.

Group of orthologs #1318. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 G.gallus:507

F6UGN5              	100.00%		F2Z4M8              	100.00%
Bootstrap support for F6UGN5 as seed ortholog is 100%.
Bootstrap support for F2Z4M8 as seed ortholog is 100%.

Group of orthologs #1319. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 G.gallus:387

H2XKP7              	100.00%		Q5MNV6              	100.00%
Bootstrap support for H2XKP7 as seed ortholog is 100%.
Bootstrap support for Q5MNV6 as seed ortholog is 100%.

Group of orthologs #1320. Best score 506 bits
Score difference with first non-orthologous sequence - C.intestinalis:506 G.gallus:506

F6QAP0              	100.00%		Q5ZLG9              	100.00%
Bootstrap support for F6QAP0 as seed ortholog is 100%.
Bootstrap support for Q5ZLG9 as seed ortholog is 100%.

Group of orthologs #1321. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 G.gallus:325

Q4H3D5              	100.00%		E1C7C2              	100.00%
                    	       		F1N848              	100.00%
                    	       		F1NZ15              	37.47%
Bootstrap support for Q4H3D5 as seed ortholog is 100%.
Bootstrap support for E1C7C2 as seed ortholog is 100%.
Bootstrap support for F1N848 as seed ortholog is 100%.

Group of orthologs #1322. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 G.gallus:276

Q4H2U9              	100.00%		F1NH64              	100.00%
                    	       		P28701              	36.61%
Bootstrap support for Q4H2U9 as seed ortholog is 100%.
Bootstrap support for F1NH64 as seed ortholog is 100%.

Group of orthologs #1323. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 G.gallus:505

F6RA65              	100.00%		F1NNG4              	100.00%
Bootstrap support for F6RA65 as seed ortholog is 100%.
Bootstrap support for F1NNG4 as seed ortholog is 100%.

Group of orthologs #1324. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 G.gallus:505

F6V6M0              	100.00%		Q4KWZ7              	100.00%
Bootstrap support for F6V6M0 as seed ortholog is 100%.
Bootstrap support for Q4KWZ7 as seed ortholog is 100%.

Group of orthologs #1325. Best score 504 bits
Score difference with first non-orthologous sequence - C.intestinalis:504 G.gallus:504

F6UQM6              	100.00%		F1NSW5              	100.00%
Bootstrap support for F6UQM6 as seed ortholog is 100%.
Bootstrap support for F1NSW5 as seed ortholog is 100%.

Group of orthologs #1326. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 G.gallus:503

F6RA92              	100.00%		Q4JIM4              	100.00%
                    	       		Q90X07              	6.24%
Bootstrap support for F6RA92 as seed ortholog is 100%.
Bootstrap support for Q4JIM4 as seed ortholog is 100%.

Group of orthologs #1327. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 G.gallus:503

F6WAW7              	100.00%		F1P3C0              	100.00%
Bootstrap support for F6WAW7 as seed ortholog is 100%.
Bootstrap support for F1P3C0 as seed ortholog is 100%.

Group of orthologs #1328. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 G.gallus:503

F6TBI8              	100.00%		P53033              	100.00%
Bootstrap support for F6TBI8 as seed ortholog is 100%.
Bootstrap support for P53033 as seed ortholog is 100%.

Group of orthologs #1329. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 G.gallus:503

F7B658              	100.00%		F1NQ85              	100.00%
Bootstrap support for F7B658 as seed ortholog is 100%.
Bootstrap support for F1NQ85 as seed ortholog is 100%.

Group of orthologs #1330. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:461 G.gallus:503

H2Y1I4              	100.00%		F1NRQ4              	100.00%
Bootstrap support for H2Y1I4 as seed ortholog is 100%.
Bootstrap support for F1NRQ4 as seed ortholog is 100%.

Group of orthologs #1331. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 G.gallus:212

F6PUP9              	100.00%		F1NTF3              	100.00%
F6Z4E6              	24.36%		F1NML5              	40.64%
Bootstrap support for F6PUP9 as seed ortholog is 100%.
Bootstrap support for F1NTF3 as seed ortholog is 99%.

Group of orthologs #1332. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 G.gallus:316

F6PHN1              	100.00%		E1BX69              	100.00%
Bootstrap support for F6PHN1 as seed ortholog is 100%.
Bootstrap support for E1BX69 as seed ortholog is 100%.

Group of orthologs #1333. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 G.gallus:502

F6YGD1              	100.00%		F1P0P4              	100.00%
Bootstrap support for F6YGD1 as seed ortholog is 100%.
Bootstrap support for F1P0P4 as seed ortholog is 100%.

Group of orthologs #1334. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 G.gallus:502

F7AJP1              	100.00%		P00504              	100.00%
Bootstrap support for F7AJP1 as seed ortholog is 100%.
Bootstrap support for P00504 as seed ortholog is 100%.

Group of orthologs #1335. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 G.gallus:502

F6Z672              	100.00%		Q5ZJT0              	100.00%
Bootstrap support for F6Z672 as seed ortholog is 100%.
Bootstrap support for Q5ZJT0 as seed ortholog is 100%.

Group of orthologs #1336. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:501 G.gallus:501

F7ACJ3              	100.00%		F1N9A8              	100.00%
                    	       		F1NWL6              	16.92%
Bootstrap support for F7ACJ3 as seed ortholog is 100%.
Bootstrap support for F1N9A8 as seed ortholog is 100%.

Group of orthologs #1337. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:501 G.gallus:501

F6VN53              	100.00%		F1NEE6              	100.00%
Bootstrap support for F6VN53 as seed ortholog is 100%.
Bootstrap support for F1NEE6 as seed ortholog is 100%.

Group of orthologs #1338. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 G.gallus:87

F7BEC5              	100.00%		F1NZB1              	100.00%
Bootstrap support for F7BEC5 as seed ortholog is 99%.
Bootstrap support for F1NZB1 as seed ortholog is 99%.

Group of orthologs #1339. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:501 G.gallus:501

Q1RL77              	100.00%		F1NFB5              	100.00%
Bootstrap support for Q1RL77 as seed ortholog is 100%.
Bootstrap support for F1NFB5 as seed ortholog is 100%.

Group of orthologs #1340. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 G.gallus:500

F6TFJ1              	100.00%		F1NDF8              	100.00%
Bootstrap support for F6TFJ1 as seed ortholog is 100%.
Bootstrap support for F1NDF8 as seed ortholog is 100%.

Group of orthologs #1341. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 G.gallus:500

F7AMV0              	100.00%		E1BVG6              	100.00%
Bootstrap support for F7AMV0 as seed ortholog is 100%.
Bootstrap support for E1BVG6 as seed ortholog is 100%.

Group of orthologs #1342. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 G.gallus:118

F6YG27              	100.00%		Q5ZHN3              	100.00%
Bootstrap support for F6YG27 as seed ortholog is 100%.
Bootstrap support for Q5ZHN3 as seed ortholog is 99%.

Group of orthologs #1343. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:445 G.gallus:499

F6VKI2              	100.00%		E1C291              	100.00%
                    	       		Q5ZMI3              	32.96%
Bootstrap support for F6VKI2 as seed ortholog is 100%.
Bootstrap support for E1C291 as seed ortholog is 100%.

Group of orthologs #1344. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 G.gallus:499

F7BHB2              	100.00%		E1BZG2              	100.00%
                    	       		F1NFV9              	6.39%
Bootstrap support for F7BHB2 as seed ortholog is 100%.
Bootstrap support for E1BZG2 as seed ortholog is 100%.

Group of orthologs #1345. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 G.gallus:499

F6ZIT4              	100.00%		F1NUB8              	100.00%
                    	       		H9KYP8              	10.02%
Bootstrap support for F6ZIT4 as seed ortholog is 100%.
Bootstrap support for F1NUB8 as seed ortholog is 100%.

Group of orthologs #1346. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 G.gallus:499

F6V318              	100.00%		F1NUZ2              	100.00%
Bootstrap support for F6V318 as seed ortholog is 100%.
Bootstrap support for F1NUZ2 as seed ortholog is 100%.

Group of orthologs #1347. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 G.gallus:498

H2XVU4              	100.00%		E1C6F6              	100.00%
H2XSC1              	12.30%		
H2XZ95              	10.04%		
H2XP11              	9.03%		
Bootstrap support for H2XVU4 as seed ortholog is 100%.
Bootstrap support for E1C6F6 as seed ortholog is 100%.

Group of orthologs #1348. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 G.gallus:498

F6YVU0              	100.00%		E1BTJ1              	100.00%
                    	       		F1NDA0              	37.09%
Bootstrap support for F6YVU0 as seed ortholog is 100%.
Bootstrap support for E1BTJ1 as seed ortholog is 100%.

Group of orthologs #1349. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 G.gallus:498

F6VN41              	100.00%		F1NQ36              	100.00%
Bootstrap support for F6VN41 as seed ortholog is 100%.
Bootstrap support for F1NQ36 as seed ortholog is 100%.

Group of orthologs #1350. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 G.gallus:498

H2XR08              	100.00%		E1C456              	100.00%
Bootstrap support for H2XR08 as seed ortholog is 100%.
Bootstrap support for E1C456 as seed ortholog is 100%.

Group of orthologs #1351. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 G.gallus:497

F6SUM0              	100.00%		E1C8M8              	100.00%
F7AAH8              	30.30%		
Bootstrap support for F6SUM0 as seed ortholog is 100%.
Bootstrap support for E1C8M8 as seed ortholog is 100%.

Group of orthologs #1352. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 G.gallus:497

F6QTS6              	100.00%		E1C7L3              	100.00%
Bootstrap support for F6QTS6 as seed ortholog is 100%.
Bootstrap support for E1C7L3 as seed ortholog is 100%.

Group of orthologs #1353. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 G.gallus:448

F6X2C4              	100.00%		E1BVC4              	100.00%
Bootstrap support for F6X2C4 as seed ortholog is 100%.
Bootstrap support for E1BVC4 as seed ortholog is 100%.

Group of orthologs #1354. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 G.gallus:497

F6SZQ5              	100.00%		F1NUM7              	100.00%
Bootstrap support for F6SZQ5 as seed ortholog is 100%.
Bootstrap support for F1NUM7 as seed ortholog is 100%.

Group of orthologs #1355. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 G.gallus:497

F6WYU9              	100.00%		F1NHS6              	100.00%
Bootstrap support for F6WYU9 as seed ortholog is 100%.
Bootstrap support for F1NHS6 as seed ortholog is 100%.

Group of orthologs #1356. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 G.gallus:497

F6SSU2              	100.00%		F1P4A5              	100.00%
Bootstrap support for F6SSU2 as seed ortholog is 100%.
Bootstrap support for F1P4A5 as seed ortholog is 100%.

Group of orthologs #1357. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 G.gallus:409

F6ZM65              	100.00%		F1NUJ8              	100.00%
Bootstrap support for F6ZM65 as seed ortholog is 100%.
Bootstrap support for F1NUJ8 as seed ortholog is 100%.

Group of orthologs #1358. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 G.gallus:497

F7AXB1              	100.00%		Q5ZJK0              	100.00%
Bootstrap support for F7AXB1 as seed ortholog is 100%.
Bootstrap support for Q5ZJK0 as seed ortholog is 100%.

Group of orthologs #1359. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 G.gallus:496

F6UD40              	100.00%		F1NDB9              	100.00%
                    	       		F1NPL5              	29.42%
Bootstrap support for F6UD40 as seed ortholog is 100%.
Bootstrap support for F1NDB9 as seed ortholog is 100%.

Group of orthologs #1360. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 G.gallus:364

F6TLU2              	100.00%		F1NQP9              	100.00%
                    	       		F1NH07              	20.53%
Bootstrap support for F6TLU2 as seed ortholog is 71%.
Alternative seed ortholog is F6TZG1 (27 bits away from this cluster)
Bootstrap support for F1NQP9 as seed ortholog is 100%.

Group of orthologs #1361. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 G.gallus:394

F6TJN1              	100.00%		Q8AWW5              	100.00%
Bootstrap support for F6TJN1 as seed ortholog is 100%.
Bootstrap support for Q8AWW5 as seed ortholog is 100%.

Group of orthologs #1362. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 G.gallus:495

H2XPZ6              	100.00%		Q92058              	100.00%
F6VTU7              	8.77%		F1NZG4              	11.37%
Bootstrap support for H2XPZ6 as seed ortholog is 83%.
Bootstrap support for Q92058 as seed ortholog is 100%.

Group of orthologs #1363. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 G.gallus:495

H2XMC6              	100.00%		H9KYQ3              	100.00%
                    	       		F1NYS8              	46.30%
Bootstrap support for H2XMC6 as seed ortholog is 100%.
Bootstrap support for H9KYQ3 as seed ortholog is 100%.

Group of orthologs #1364. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 G.gallus:495

Q9NL46              	100.00%		F1P4M8              	100.00%
                    	       		F1P5N3              	49.28%
Bootstrap support for Q9NL46 as seed ortholog is 100%.
Bootstrap support for F1P4M8 as seed ortholog is 100%.

Group of orthologs #1365. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 G.gallus:495

F6R213              	100.00%		E1BS46              	100.00%
Bootstrap support for F6R213 as seed ortholog is 100%.
Bootstrap support for E1BS46 as seed ortholog is 100%.

Group of orthologs #1366. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 G.gallus:495

F6PZT9              	100.00%		E1BZM5              	100.00%
Bootstrap support for F6PZT9 as seed ortholog is 100%.
Bootstrap support for E1BZM5 as seed ortholog is 100%.

Group of orthologs #1367. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 G.gallus:495

F6RU68              	100.00%		E1BWL0              	100.00%
Bootstrap support for F6RU68 as seed ortholog is 100%.
Bootstrap support for E1BWL0 as seed ortholog is 100%.

Group of orthologs #1368. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 G.gallus:495

F6W6V6              	100.00%		F1NHR4              	100.00%
Bootstrap support for F6W6V6 as seed ortholog is 85%.
Bootstrap support for F1NHR4 as seed ortholog is 100%.

Group of orthologs #1369. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 G.gallus:495

H2XXL6              	100.00%		E1C0Z0              	100.00%
Bootstrap support for H2XXL6 as seed ortholog is 100%.
Bootstrap support for E1C0Z0 as seed ortholog is 100%.

Group of orthologs #1370. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 G.gallus:200

F6SYV7              	100.00%		Q5ZK33              	100.00%
Bootstrap support for F6SYV7 as seed ortholog is 100%.
Bootstrap support for Q5ZK33 as seed ortholog is 100%.

Group of orthologs #1371. Best score 494 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:440

F6Z465              	100.00%		F1N9W1              	100.00%
                    	       		F1NP97              	63.93%
Bootstrap support for F6Z465 as seed ortholog is 100%.
Bootstrap support for F1N9W1 as seed ortholog is 100%.

Group of orthologs #1372. Best score 494 bits
Score difference with first non-orthologous sequence - C.intestinalis:494 G.gallus:494

F6R1B9              	100.00%		E1BUT1              	100.00%
Bootstrap support for F6R1B9 as seed ortholog is 100%.
Bootstrap support for E1BUT1 as seed ortholog is 100%.

Group of orthologs #1373. Best score 494 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 G.gallus:266

F6TI28              	100.00%		E1BYP5              	100.00%
Bootstrap support for F6TI28 as seed ortholog is 100%.
Bootstrap support for E1BYP5 as seed ortholog is 100%.

Group of orthologs #1374. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 G.gallus:493

F6U1G1              	100.00%		F1NWY8              	100.00%
Bootstrap support for F6U1G1 as seed ortholog is 100%.
Bootstrap support for F1NWY8 as seed ortholog is 100%.

Group of orthologs #1375. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 G.gallus:401

F6R683              	100.00%		H9L019              	100.00%
Bootstrap support for F6R683 as seed ortholog is 100%.
Bootstrap support for H9L019 as seed ortholog is 100%.

Group of orthologs #1376. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 G.gallus:329

H2XMT7              	100.00%		F1NC82              	100.00%
Bootstrap support for H2XMT7 as seed ortholog is 100%.
Bootstrap support for F1NC82 as seed ortholog is 100%.

Group of orthologs #1377. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 G.gallus:493

H2XLC1              	100.00%		F1NWA8              	100.00%
Bootstrap support for H2XLC1 as seed ortholog is 100%.
Bootstrap support for F1NWA8 as seed ortholog is 100%.

Group of orthologs #1378. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 G.gallus:118

F6TLX0              	100.00%		F1NKN2              	100.00%
                    	       		Q8QHL3              	28.80%
                    	       		F1NW21              	22.07%
                    	       		F1N871              	21.66%
Bootstrap support for F6TLX0 as seed ortholog is 100%.
Bootstrap support for F1NKN2 as seed ortholog is 98%.

Group of orthologs #1379. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 G.gallus:161

F6YFX5              	100.00%		P19019              	100.00%
                    	       		F1NES7              	98.94%
                    	       		F1NB54              	59.83%
                    	       		P24045              	47.78%
Bootstrap support for F6YFX5 as seed ortholog is 100%.
Bootstrap support for P19019 as seed ortholog is 100%.

Group of orthologs #1380. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:492

F7B4M1              	100.00%		Q9PWH2              	100.00%
                    	       		Q9IA02              	14.09%
                    	       		Q9IA05              	8.48%
Bootstrap support for F7B4M1 as seed ortholog is 99%.
Bootstrap support for Q9PWH2 as seed ortholog is 100%.

Group of orthologs #1381. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 G.gallus:492

F6RXZ8              	100.00%		Q5ZLN9              	100.00%
                    	       		F1ND94              	32.43%
Bootstrap support for F6RXZ8 as seed ortholog is 100%.
Bootstrap support for Q5ZLN9 as seed ortholog is 100%.

Group of orthologs #1382. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 G.gallus:296

F6YHR6              	100.00%		Q90577              	100.00%
                    	       		E1BR47              	43.70%
Bootstrap support for F6YHR6 as seed ortholog is 100%.
Bootstrap support for Q90577 as seed ortholog is 100%.

Group of orthologs #1383. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 G.gallus:492

F6SY86              	100.00%		E1BQM2              	100.00%
Bootstrap support for F6SY86 as seed ortholog is 100%.
Bootstrap support for E1BQM2 as seed ortholog is 100%.

Group of orthologs #1384. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 G.gallus:492

H2XRD9              	100.00%		F1NBY5              	100.00%
Bootstrap support for H2XRD9 as seed ortholog is 100%.
Bootstrap support for F1NBY5 as seed ortholog is 100%.

Group of orthologs #1385. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 G.gallus:145

H2Y2I8              	100.00%		Q9IAL7              	100.00%
                    	       		Q9IAL8              	26.30%
Bootstrap support for H2Y2I8 as seed ortholog is 99%.
Bootstrap support for Q9IAL7 as seed ortholog is 99%.

Group of orthologs #1386. Best score 490 bits
Score difference with first non-orthologous sequence - C.intestinalis:490 G.gallus:490

F6XEV8              	100.00%		E1C8Q2              	100.00%
                    	       		H9KZJ7              	32.38%
                    	       		F1NIA8              	31.81%
                    	       		H9L0I4              	8.38%
Bootstrap support for F6XEV8 as seed ortholog is 100%.
Bootstrap support for E1C8Q2 as seed ortholog is 100%.

Group of orthologs #1387. Best score 490 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 G.gallus:305

F7ALL8              	100.00%		F1NRS3              	100.00%
                    	       		F1P0R6              	24.33%
Bootstrap support for F7ALL8 as seed ortholog is 99%.
Bootstrap support for F1NRS3 as seed ortholog is 100%.

Group of orthologs #1388. Best score 490 bits
Score difference with first non-orthologous sequence - C.intestinalis:490 G.gallus:490

F6TJB5              	100.00%		Q5ZLM2              	100.00%
Bootstrap support for F6TJB5 as seed ortholog is 100%.
Bootstrap support for Q5ZLM2 as seed ortholog is 100%.

Group of orthologs #1389. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:489 G.gallus:489

F6Z2I4              	100.00%		E1C334              	100.00%
                    	       		F1NWZ7              	23.82%
                    	       		Q5ZHX6              	23.82%
                    	       		E1BYU1              	13.23%
Bootstrap support for F6Z2I4 as seed ortholog is 100%.
Bootstrap support for E1C334 as seed ortholog is 100%.

Group of orthologs #1390. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 G.gallus:296

F6WVT9              	100.00%		E1BSA6              	100.00%
Bootstrap support for F6WVT9 as seed ortholog is 97%.
Bootstrap support for E1BSA6 as seed ortholog is 100%.

Group of orthologs #1391. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:489 G.gallus:489

F6SSP8              	100.00%		E1C8G8              	100.00%
Bootstrap support for F6SSP8 as seed ortholog is 100%.
Bootstrap support for E1C8G8 as seed ortholog is 100%.

Group of orthologs #1392. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:489 G.gallus:489

F6VEU2              	100.00%		E1C3R0              	100.00%
Bootstrap support for F6VEU2 as seed ortholog is 100%.
Bootstrap support for E1C3R0 as seed ortholog is 100%.

Group of orthologs #1393. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:489 G.gallus:402

F6ZFW2              	100.00%		E1C5G9              	100.00%
Bootstrap support for F6ZFW2 as seed ortholog is 100%.
Bootstrap support for E1C5G9 as seed ortholog is 100%.

Group of orthologs #1394. Best score 489 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 G.gallus:249

F6ZSR8              	100.00%		F1NCQ0              	100.00%
Bootstrap support for F6ZSR8 as seed ortholog is 100%.
Bootstrap support for F1NCQ0 as seed ortholog is 100%.

Group of orthologs #1395. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 G.gallus:488

F6V4L6              	100.00%		F1P5P5              	100.00%
                    	       		F1P0Y7              	30.99%
                    	       		F1P0Y8              	9.30%
Bootstrap support for F6V4L6 as seed ortholog is 100%.
Bootstrap support for F1P5P5 as seed ortholog is 100%.

Group of orthologs #1396. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 G.gallus:323

F6RS86              	100.00%		E1BYW5              	100.00%
F7ARF4              	40.82%		
Bootstrap support for F6RS86 as seed ortholog is 100%.
Bootstrap support for E1BYW5 as seed ortholog is 100%.

Group of orthologs #1397. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 G.gallus:206

H2XP89              	100.00%		F1P0L1              	100.00%
                    	       		F1P0K9              	52.63%
Bootstrap support for H2XP89 as seed ortholog is 100%.
Bootstrap support for F1P0L1 as seed ortholog is 99%.

Group of orthologs #1398. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 G.gallus:488

F6R763              	100.00%		F1NKJ8              	100.00%
Bootstrap support for F6R763 as seed ortholog is 100%.
Bootstrap support for F1NKJ8 as seed ortholog is 100%.

Group of orthologs #1399. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 G.gallus:488

F6ZYJ2              	100.00%		E1BWQ3              	100.00%
Bootstrap support for F6ZYJ2 as seed ortholog is 100%.
Bootstrap support for E1BWQ3 as seed ortholog is 100%.

Group of orthologs #1400. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 G.gallus:488

F6U397              	100.00%		F1NLA8              	100.00%
Bootstrap support for F6U397 as seed ortholog is 100%.
Bootstrap support for F1NLA8 as seed ortholog is 100%.

Group of orthologs #1401. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 G.gallus:488

F7ACB9              	100.00%		E1C5A7              	100.00%
Bootstrap support for F7ACB9 as seed ortholog is 100%.
Bootstrap support for E1C5A7 as seed ortholog is 100%.

Group of orthologs #1402. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 G.gallus:154

F6U4H3              	100.00%		F1NS74              	100.00%
Bootstrap support for F6U4H3 as seed ortholog is 100%.
Bootstrap support for F1NS74 as seed ortholog is 99%.

Group of orthologs #1403. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 G.gallus:488

F6W9I8              	100.00%		Q5ZJD3              	100.00%
Bootstrap support for F6W9I8 as seed ortholog is 100%.
Bootstrap support for Q5ZJD3 as seed ortholog is 100%.

Group of orthologs #1404. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 G.gallus:31

F7BAF2              	100.00%		F1NDS6              	100.00%
                    	       		E1C3I4              	9.91%
                    	       		F1NFL0              	6.32%
Bootstrap support for F7BAF2 as seed ortholog is 37%.
Alternative seed ortholog is F6VIT0 (17 bits away from this cluster)
Bootstrap support for F1NDS6 as seed ortholog is 75%.

Group of orthologs #1405. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 G.gallus:487

F6YDK0              	100.00%		E1BQX2              	100.00%
Bootstrap support for F6YDK0 as seed ortholog is 100%.
Bootstrap support for E1BQX2 as seed ortholog is 100%.

Group of orthologs #1406. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 G.gallus:487

F7AA24              	100.00%		E1BSM9              	100.00%
Bootstrap support for F7AA24 as seed ortholog is 100%.
Bootstrap support for E1BSM9 as seed ortholog is 100%.

Group of orthologs #1407. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 G.gallus:408

F6ZGR3              	100.00%		E1BY60              	100.00%
Bootstrap support for F6ZGR3 as seed ortholog is 100%.
Bootstrap support for E1BY60 as seed ortholog is 100%.

Group of orthologs #1408. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 G.gallus:487

F6YP95              	100.00%		F1P2Z0              	100.00%
Bootstrap support for F6YP95 as seed ortholog is 100%.
Bootstrap support for F1P2Z0 as seed ortholog is 100%.

Group of orthologs #1409. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 G.gallus:487

F6UTV1              	100.00%		Q5ZL83              	100.00%
Bootstrap support for F6UTV1 as seed ortholog is 100%.
Bootstrap support for Q5ZL83 as seed ortholog is 100%.

Group of orthologs #1410. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 G.gallus:487

F7B8G2              	100.00%		Q5ZMQ9              	100.00%
Bootstrap support for F7B8G2 as seed ortholog is 100%.
Bootstrap support for Q5ZMQ9 as seed ortholog is 100%.

Group of orthologs #1411. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 G.gallus:424

H2XQC1              	100.00%		F1NZX7              	100.00%
                    	       		F1NW87              	19.96%
Bootstrap support for H2XQC1 as seed ortholog is 100%.
Bootstrap support for F1NZX7 as seed ortholog is 100%.

Group of orthologs #1412. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 G.gallus:486

F6XHE4              	100.00%		E1BUX1              	100.00%
Bootstrap support for F6XHE4 as seed ortholog is 100%.
Bootstrap support for E1BUX1 as seed ortholog is 100%.

Group of orthologs #1413. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 G.gallus:486

F6U1E2              	100.00%		F1P4E5              	100.00%
Bootstrap support for F6U1E2 as seed ortholog is 100%.
Bootstrap support for F1P4E5 as seed ortholog is 100%.

Group of orthologs #1414. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 G.gallus:485

F6WBK6              	100.00%		F1NGP6              	100.00%
Bootstrap support for F6WBK6 as seed ortholog is 100%.
Bootstrap support for F1NGP6 as seed ortholog is 100%.

Group of orthologs #1415. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 G.gallus:485

F6Z2X4              	100.00%		F1NM54              	100.00%
Bootstrap support for F6Z2X4 as seed ortholog is 100%.
Bootstrap support for F1NM54 as seed ortholog is 100%.

Group of orthologs #1416. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 G.gallus:485

H2XTN4              	100.00%		F1P1N5              	100.00%
Bootstrap support for H2XTN4 as seed ortholog is 100%.
Bootstrap support for F1P1N5 as seed ortholog is 100%.

Group of orthologs #1417. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 G.gallus:158

F6YNE2              	100.00%		E1BS64              	100.00%
                    	       		Q98SN3              	36.34%
Bootstrap support for F6YNE2 as seed ortholog is 100%.
Bootstrap support for E1BS64 as seed ortholog is 99%.

Group of orthologs #1418. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 G.gallus:484

F7AX37              	100.00%		E1BWY2              	100.00%
                    	       		E1C3E3              	32.79%
Bootstrap support for F7AX37 as seed ortholog is 100%.
Bootstrap support for E1BWY2 as seed ortholog is 100%.

Group of orthologs #1419. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 G.gallus:484

F6W510              	100.00%		F1NRR5              	100.00%
                    	       		F1NDX6              	18.26%
Bootstrap support for F6W510 as seed ortholog is 100%.
Bootstrap support for F1NRR5 as seed ortholog is 100%.

Group of orthologs #1420. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 G.gallus:432

F6ZUD0              	100.00%		Q5ZHW3              	100.00%
Bootstrap support for F6ZUD0 as seed ortholog is 100%.
Bootstrap support for Q5ZHW3 as seed ortholog is 100%.

Group of orthologs #1421. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 G.gallus:483

F6YGK4              	100.00%		O42254              	100.00%
                    	       		Q5ZLP8              	64.02%
                    	       		F1NVW3              	42.84%
Bootstrap support for F6YGK4 as seed ortholog is 100%.
Bootstrap support for O42254 as seed ortholog is 100%.

Group of orthologs #1422. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 G.gallus:220

F6TM19              	100.00%		F1NVG1              	100.00%
                    	       		F1N8U4              	26.56%
Bootstrap support for F6TM19 as seed ortholog is 100%.
Bootstrap support for F1NVG1 as seed ortholog is 99%.

Group of orthologs #1423. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 G.gallus:483

Q1RLE3              	100.00%		E1BTK2              	100.00%
                    	       		E1C2Q5              	10.62%
Bootstrap support for Q1RLE3 as seed ortholog is 100%.
Bootstrap support for E1BTK2 as seed ortholog is 100%.

Group of orthologs #1424. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 G.gallus:483

F6QR08              	100.00%		F1NW50              	100.00%
Bootstrap support for F6QR08 as seed ortholog is 100%.
Bootstrap support for F1NW50 as seed ortholog is 100%.

Group of orthologs #1425. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 G.gallus:316

F7BH52              	100.00%		E1C6N5              	100.00%
Bootstrap support for F7BH52 as seed ortholog is 99%.
Bootstrap support for E1C6N5 as seed ortholog is 100%.

Group of orthologs #1426. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 G.gallus:483

F6YEQ8              	100.00%		Q5ZKC1              	100.00%
Bootstrap support for F6YEQ8 as seed ortholog is 100%.
Bootstrap support for Q5ZKC1 as seed ortholog is 100%.

Group of orthologs #1427. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 G.gallus:482

F6THY1              	100.00%		F1NNV5              	100.00%
                    	       		F1NF65              	34.39%
Bootstrap support for F6THY1 as seed ortholog is 100%.
Bootstrap support for F1NNV5 as seed ortholog is 100%.

Group of orthologs #1428. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 G.gallus:482

F6SLD6              	100.00%		F1N886              	100.00%
Bootstrap support for F6SLD6 as seed ortholog is 100%.
Bootstrap support for F1N886 as seed ortholog is 100%.

Group of orthologs #1429. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 G.gallus:482

F6Z9J5              	100.00%		Q5ZLL7              	100.00%
Bootstrap support for F6Z9J5 as seed ortholog is 100%.
Bootstrap support for Q5ZLL7 as seed ortholog is 100%.

Group of orthologs #1430. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 G.gallus:481

F6XMP8              	100.00%		E1C903              	100.00%
                    	       		E1BWJ7              	52.20%
                    	       		F1NH81              	49.22%
                    	       		F1NH82              	23.06%
Bootstrap support for F6XMP8 as seed ortholog is 100%.
Bootstrap support for E1C903 as seed ortholog is 100%.

Group of orthologs #1431. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 G.gallus:481

F7B065              	100.00%		E1C3A0              	100.00%
                    	       		E1C882              	17.06%
                    	       		E1C426              	7.09%
Bootstrap support for F7B065 as seed ortholog is 100%.
Bootstrap support for E1C3A0 as seed ortholog is 100%.

Group of orthologs #1432. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 G.gallus:480

F6U6T9              	100.00%		F1NEK9              	100.00%
Bootstrap support for F6U6T9 as seed ortholog is 100%.
Bootstrap support for F1NEK9 as seed ortholog is 100%.

Group of orthologs #1433. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 G.gallus:480

F7BH80              	100.00%		F1NDW0              	100.00%
Bootstrap support for F7BH80 as seed ortholog is 100%.
Bootstrap support for F1NDW0 as seed ortholog is 100%.

Group of orthologs #1434. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 G.gallus:480

H2Y2G1              	100.00%		Q5ZMH9              	100.00%
Bootstrap support for H2Y2G1 as seed ortholog is 100%.
Bootstrap support for Q5ZMH9 as seed ortholog is 100%.

Group of orthologs #1435. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 G.gallus:304

F6PJL7              	100.00%		E1BT35              	100.00%
                    	       		F1NCY7              	13.98%
Bootstrap support for F6PJL7 as seed ortholog is 100%.
Bootstrap support for E1BT35 as seed ortholog is 100%.

Group of orthologs #1436. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 G.gallus:16

F6R798              	100.00%		F1NCG8              	100.00%
                    	       		F1NL74              	15.79%
Bootstrap support for F6R798 as seed ortholog is 100%.
Bootstrap support for F1NCG8 as seed ortholog is 64%.
Alternative seed ortholog is F1N8F1 (16 bits away from this cluster)

Group of orthologs #1437. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 G.gallus:424

Q1RPW9              	100.00%		F1P5E2              	100.00%
                    	       		F1NVZ1              	14.13%
Bootstrap support for Q1RPW9 as seed ortholog is 100%.
Bootstrap support for F1P5E2 as seed ortholog is 100%.

Group of orthologs #1438. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 G.gallus:479

F6W318              	100.00%		E1BUY5              	100.00%
Bootstrap support for F6W318 as seed ortholog is 100%.
Bootstrap support for E1BUY5 as seed ortholog is 100%.

Group of orthologs #1439. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 G.gallus:270

F7ATZ1              	100.00%		E1BX19              	100.00%
Bootstrap support for F7ATZ1 as seed ortholog is 100%.
Bootstrap support for E1BX19 as seed ortholog is 100%.

Group of orthologs #1440. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 G.gallus:479

F6SYW5              	100.00%		F1NZA1              	100.00%
Bootstrap support for F6SYW5 as seed ortholog is 100%.
Bootstrap support for F1NZA1 as seed ortholog is 100%.

Group of orthologs #1441. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 G.gallus:416

F6XR36              	100.00%		F1NYQ2              	100.00%
                    	       		F1NZH4              	40.09%
                    	       		F1NAY6              	32.03%
Bootstrap support for F6XR36 as seed ortholog is 100%.
Bootstrap support for F1NYQ2 as seed ortholog is 100%.

Group of orthologs #1442. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 G.gallus:342

F6SFP2              	100.00%		F1NL00              	100.00%
                    	       		Q9IA88              	100.00%
Bootstrap support for F6SFP2 as seed ortholog is 100%.
Bootstrap support for F1NL00 as seed ortholog is 100%.
Bootstrap support for Q9IA88 as seed ortholog is 100%.

Group of orthologs #1443. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 G.gallus:478

F7A8L8              	100.00%		E1BTH9              	100.00%
Bootstrap support for F7A8L8 as seed ortholog is 100%.
Bootstrap support for E1BTH9 as seed ortholog is 100%.

Group of orthologs #1444. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 G.gallus:478

F6TNQ8              	100.00%		F1NI62              	100.00%
Bootstrap support for F6TNQ8 as seed ortholog is 99%.
Bootstrap support for F1NI62 as seed ortholog is 100%.

Group of orthologs #1445. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 G.gallus:478

F7A1T4              	100.00%		E1C7A5              	100.00%
Bootstrap support for F7A1T4 as seed ortholog is 100%.
Bootstrap support for E1C7A5 as seed ortholog is 100%.

Group of orthologs #1446. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 G.gallus:478

F7B059              	100.00%		F1P340              	100.00%
Bootstrap support for F7B059 as seed ortholog is 100%.
Bootstrap support for F1P340 as seed ortholog is 100%.

Group of orthologs #1447. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 G.gallus:325

H2XY01              	100.00%		F1NH33              	100.00%
Bootstrap support for H2XY01 as seed ortholog is 84%.
Bootstrap support for F1NH33 as seed ortholog is 100%.

Group of orthologs #1448. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 G.gallus:478

F6ZTT3              	100.00%		O42224              	100.00%
Bootstrap support for F6ZTT3 as seed ortholog is 100%.
Bootstrap support for O42224 as seed ortholog is 100%.

Group of orthologs #1449. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 G.gallus:477

F6XVX1              	100.00%		E1BXY1              	100.00%
                    	       		E1BQD9              	23.91%
Bootstrap support for F6XVX1 as seed ortholog is 100%.
Bootstrap support for E1BXY1 as seed ortholog is 100%.

Group of orthologs #1450. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 G.gallus:477

F6VZF6              	100.00%		Q5ZHX9              	100.00%
                    	       		F1NBE0              	46.44%
Bootstrap support for F6VZF6 as seed ortholog is 100%.
Bootstrap support for Q5ZHX9 as seed ortholog is 100%.

Group of orthologs #1451. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 G.gallus:312

Q9NL28              	100.00%		Q90923              	100.00%
                    	       		Q90922              	59.32%
Bootstrap support for Q9NL28 as seed ortholog is 100%.
Bootstrap support for Q90923 as seed ortholog is 100%.

Group of orthologs #1452. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 G.gallus:477

F6R4F4              	100.00%		E1BZS2              	100.00%
Bootstrap support for F6R4F4 as seed ortholog is 100%.
Bootstrap support for E1BZS2 as seed ortholog is 100%.

Group of orthologs #1453. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 G.gallus:308

F6XJF3              	100.00%		F1NZ28              	100.00%
Bootstrap support for F6XJF3 as seed ortholog is 100%.
Bootstrap support for F1NZ28 as seed ortholog is 100%.

Group of orthologs #1454. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 G.gallus:477

F7BP62              	100.00%		F1P0F0              	100.00%
Bootstrap support for F7BP62 as seed ortholog is 100%.
Bootstrap support for F1P0F0 as seed ortholog is 100%.

Group of orthologs #1455. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 G.gallus:477

H2XTB6              	100.00%		Q5ZLG8              	100.00%
Bootstrap support for H2XTB6 as seed ortholog is 100%.
Bootstrap support for Q5ZLG8 as seed ortholog is 100%.

Group of orthologs #1456. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 G.gallus:167

F6TVX8              	100.00%		P46896              	100.00%
                    	       		P28568              	41.03%
                    	       		Q90592              	12.58%
Bootstrap support for F6TVX8 as seed ortholog is 100%.
Bootstrap support for P46896 as seed ortholog is 99%.

Group of orthologs #1457. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 G.gallus:399

F6ZG18              	100.00%		E1C9I6              	100.00%
                    	       		F1P0P9              	46.75%
Bootstrap support for F6ZG18 as seed ortholog is 100%.
Bootstrap support for E1C9I6 as seed ortholog is 100%.

Group of orthologs #1458. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 G.gallus:476

F6QS75              	100.00%		E1BYI3              	100.00%
Bootstrap support for F6QS75 as seed ortholog is 100%.
Bootstrap support for E1BYI3 as seed ortholog is 100%.

Group of orthologs #1459. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 G.gallus:476

F6T2S3              	100.00%		E1C959              	100.00%
Bootstrap support for F6T2S3 as seed ortholog is 100%.
Bootstrap support for E1C959 as seed ortholog is 100%.

Group of orthologs #1460. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 G.gallus:286

F6ZRR5              	100.00%		E1C4M1              	100.00%
Bootstrap support for F6ZRR5 as seed ortholog is 100%.
Bootstrap support for E1C4M1 as seed ortholog is 100%.

Group of orthologs #1461. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:382

F6W2S7              	100.00%		F1P183              	100.00%
Bootstrap support for F6W2S7 as seed ortholog is 100%.
Bootstrap support for F1P183 as seed ortholog is 100%.

Group of orthologs #1462. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 G.gallus:476

F6TBF9              	100.00%		Q5ZJ85              	100.00%
Bootstrap support for F6TBF9 as seed ortholog is 100%.
Bootstrap support for Q5ZJ85 as seed ortholog is 100%.

Group of orthologs #1463. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 G.gallus:55

F6VBC2              	100.00%		F1NW99              	100.00%
                    	       		F1P2E1              	24.72%
                    	       		F1NN79              	21.47%
Bootstrap support for F6VBC2 as seed ortholog is 99%.
Bootstrap support for F1NW99 as seed ortholog is 82%.

Group of orthologs #1464. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 G.gallus:475

F6UF11              	100.00%		F1NJI5              	100.00%
Bootstrap support for F6UF11 as seed ortholog is 100%.
Bootstrap support for F1NJI5 as seed ortholog is 100%.

Group of orthologs #1465. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 G.gallus:475

F6PP44              	100.00%		P07341              	100.00%
Bootstrap support for F6PP44 as seed ortholog is 100%.
Bootstrap support for P07341 as seed ortholog is 100%.

Group of orthologs #1466. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 G.gallus:416

F6QDG1              	100.00%		Q5ZMV7              	100.00%
Bootstrap support for F6QDG1 as seed ortholog is 100%.
Bootstrap support for Q5ZMV7 as seed ortholog is 100%.

Group of orthologs #1467. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 G.gallus:474

F6VNW9              	100.00%		F1NGN6              	100.00%
Bootstrap support for F6VNW9 as seed ortholog is 100%.
Bootstrap support for F1NGN6 as seed ortholog is 100%.

Group of orthologs #1468. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 G.gallus:474

F7AVN1              	100.00%		F1NEN8              	100.00%
Bootstrap support for F7AVN1 as seed ortholog is 100%.
Bootstrap support for F1NEN8 as seed ortholog is 100%.

Group of orthologs #1469. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 G.gallus:390

F6PYJ8              	100.00%		Q5ZMJ4              	100.00%
Bootstrap support for F6PYJ8 as seed ortholog is 100%.
Bootstrap support for Q5ZMJ4 as seed ortholog is 100%.

Group of orthologs #1470. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 G.gallus:138

D2KU21              	100.00%		E1BTB5              	100.00%
                    	       		F1NMN1              	54.34%
                    	       		F1NEM1              	54.12%
                    	       		F1NH12              	50.33%
Bootstrap support for D2KU21 as seed ortholog is 100%.
Bootstrap support for E1BTB5 as seed ortholog is 99%.

Group of orthologs #1471. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 G.gallus:288

F6PYE4              	100.00%		F1P0M8              	100.00%
                    	       		H9KZE9              	14.48%
                    	       		F1NT97              	5.41%
Bootstrap support for F6PYE4 as seed ortholog is 100%.
Bootstrap support for F1P0M8 as seed ortholog is 100%.

Group of orthologs #1472. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 G.gallus:338

F6WQ08              	100.00%		F1NHB6              	100.00%
Bootstrap support for F6WQ08 as seed ortholog is 100%.
Bootstrap support for F1NHB6 as seed ortholog is 100%.

Group of orthologs #1473. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 G.gallus:473

F7B314              	100.00%		E1C8D3              	100.00%
Bootstrap support for F7B314 as seed ortholog is 100%.
Bootstrap support for E1C8D3 as seed ortholog is 100%.

Group of orthologs #1474. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 G.gallus:473

H2Y123              	100.00%		F1NC34              	100.00%
Bootstrap support for H2Y123 as seed ortholog is 100%.
Bootstrap support for F1NC34 as seed ortholog is 100%.

Group of orthologs #1475. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 G.gallus:473

F7AB24              	100.00%		Q5ZMT7              	100.00%
Bootstrap support for F7AB24 as seed ortholog is 100%.
Bootstrap support for Q5ZMT7 as seed ortholog is 100%.

Group of orthologs #1476. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 G.gallus:472

F6U8A8              	100.00%		E1C1K5              	100.00%
                    	       		H9L3K5              	43.66%
Bootstrap support for F6U8A8 as seed ortholog is 100%.
Bootstrap support for E1C1K5 as seed ortholog is 100%.

Group of orthologs #1477. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 G.gallus:472

F6Q0X6              	100.00%		E1BRU6              	100.00%
Bootstrap support for F6Q0X6 as seed ortholog is 100%.
Bootstrap support for E1BRU6 as seed ortholog is 100%.

Group of orthologs #1478. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 G.gallus:368

F6XWW8              	100.00%		E1BWI8              	100.00%
Bootstrap support for F6XWW8 as seed ortholog is 100%.
Bootstrap support for E1BWI8 as seed ortholog is 100%.

Group of orthologs #1479. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 G.gallus:472

F6ZRT4              	100.00%		E1BTA1              	100.00%
Bootstrap support for F6ZRT4 as seed ortholog is 100%.
Bootstrap support for E1BTA1 as seed ortholog is 100%.

Group of orthologs #1480. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 G.gallus:472

F6QXQ1              	100.00%		F1NVJ0              	100.00%
Bootstrap support for F6QXQ1 as seed ortholog is 99%.
Bootstrap support for F1NVJ0 as seed ortholog is 100%.

Group of orthologs #1481. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 G.gallus:472

H2XP51              	100.00%		F1NL78              	100.00%
Bootstrap support for H2XP51 as seed ortholog is 100%.
Bootstrap support for F1NL78 as seed ortholog is 100%.

Group of orthologs #1482. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 G.gallus:471

F6SCN2              	100.00%		E1BVT3              	100.00%
Bootstrap support for F6SCN2 as seed ortholog is 100%.
Bootstrap support for E1BVT3 as seed ortholog is 100%.

Group of orthologs #1483. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 G.gallus:319

F6RD19              	100.00%		Q9DEE9              	100.00%
Bootstrap support for F6RD19 as seed ortholog is 100%.
Bootstrap support for Q9DEE9 as seed ortholog is 100%.

Group of orthologs #1484. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 G.gallus:94

F7ALM5              	100.00%		P49024              	100.00%
Bootstrap support for F7ALM5 as seed ortholog is 100%.
Bootstrap support for P49024 as seed ortholog is 99%.

Group of orthologs #1485. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 G.gallus:29

H2XYF8              	100.00%		F1P2G0              	100.00%
Bootstrap support for H2XYF8 as seed ortholog is 100%.
Bootstrap support for F1P2G0 as seed ortholog is 87%.

Group of orthologs #1486. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 G.gallus:190

F7AMH7              	100.00%		E1C6M3              	100.00%
                    	       		Q92177              	31.01%
                    	       		P00789              	28.78%
                    	       		F1P052              	26.03%
                    	       		Q92178              	25.19%
Bootstrap support for F7AMH7 as seed ortholog is 100%.
Bootstrap support for E1C6M3 as seed ortholog is 100%.

Group of orthologs #1487. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 G.gallus:316

F6S0X0              	100.00%		F1NM06              	100.00%
Bootstrap support for F6S0X0 as seed ortholog is 100%.
Bootstrap support for F1NM06 as seed ortholog is 100%.

Group of orthologs #1488. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 G.gallus:470

F6PKT6              	100.00%		F1NZN8              	100.00%
Bootstrap support for F6PKT6 as seed ortholog is 100%.
Bootstrap support for F1NZN8 as seed ortholog is 100%.

Group of orthologs #1489. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 G.gallus:470

F6PH58              	100.00%		F1P4P9              	100.00%
Bootstrap support for F6PH58 as seed ortholog is 100%.
Bootstrap support for F1P4P9 as seed ortholog is 100%.

Group of orthologs #1490. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 G.gallus:244

Q4H358              	100.00%		F1N862              	100.00%
Bootstrap support for Q4H358 as seed ortholog is 100%.
Bootstrap support for F1N862 as seed ortholog is 100%.

Group of orthologs #1491. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 G.gallus:469

F6UJF1              	100.00%		E1BQH1              	100.00%
Bootstrap support for F6UJF1 as seed ortholog is 100%.
Bootstrap support for E1BQH1 as seed ortholog is 100%.

Group of orthologs #1492. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 G.gallus:469

H2XYI9              	100.00%		E1BUM7              	100.00%
Bootstrap support for H2XYI9 as seed ortholog is 99%.
Bootstrap support for E1BUM7 as seed ortholog is 100%.

Group of orthologs #1493. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 G.gallus:288

H2XSK6              	100.00%		F1NVY5              	100.00%
Bootstrap support for H2XSK6 as seed ortholog is 100%.
Bootstrap support for F1NVY5 as seed ortholog is 100%.

Group of orthologs #1494. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 G.gallus:469

H2XZV8              	100.00%		Q8AWW1              	100.00%
Bootstrap support for H2XZV8 as seed ortholog is 100%.
Bootstrap support for Q8AWW1 as seed ortholog is 100%.

Group of orthologs #1495. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 G.gallus:468

F6YD53              	100.00%		F1NE69              	100.00%
                    	       		Q9PWR1              	47.25%
Bootstrap support for F6YD53 as seed ortholog is 100%.
Bootstrap support for F1NE69 as seed ortholog is 100%.

Group of orthologs #1496. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 G.gallus:468

F6SJ40              	100.00%		E1C3V0              	100.00%
Bootstrap support for F6SJ40 as seed ortholog is 100%.
Bootstrap support for E1C3V0 as seed ortholog is 100%.

Group of orthologs #1497. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 G.gallus:468

F6V055              	100.00%		E1BZ81              	100.00%
Bootstrap support for F6V055 as seed ortholog is 100%.
Bootstrap support for E1BZ81 as seed ortholog is 100%.

Group of orthologs #1498. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 G.gallus:468

F7AEM1              	100.00%		E1BUP6              	100.00%
Bootstrap support for F7AEM1 as seed ortholog is 100%.
Bootstrap support for E1BUP6 as seed ortholog is 100%.

Group of orthologs #1499. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 G.gallus:468

F7A172              	100.00%		P22451              	100.00%
Bootstrap support for F7A172 as seed ortholog is 100%.
Bootstrap support for P22451 as seed ortholog is 100%.

Group of orthologs #1500. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 G.gallus:55

F7B6S1              	100.00%		Q9IA31              	100.00%
Bootstrap support for F7B6S1 as seed ortholog is 100%.
Bootstrap support for Q9IA31 as seed ortholog is 69%.
Alternative seed ortholog is P55879 (55 bits away from this cluster)

Group of orthologs #1501. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 G.gallus:467

F7BDF6              	100.00%		F1NXA4              	100.00%
                    	       		E1BY47              	26.68%
Bootstrap support for F7BDF6 as seed ortholog is 100%.
Bootstrap support for F1NXA4 as seed ortholog is 100%.

Group of orthologs #1502. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 G.gallus:467

F6U5W6              	100.00%		F1NA92              	100.00%
Bootstrap support for F6U5W6 as seed ortholog is 100%.
Bootstrap support for F1NA92 as seed ortholog is 100%.

Group of orthologs #1503. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 G.gallus:308

Q4H3F3              	100.00%		F1NVM8              	100.00%
Bootstrap support for Q4H3F3 as seed ortholog is 100%.
Bootstrap support for F1NVM8 as seed ortholog is 100%.

Group of orthologs #1504. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 G.gallus:92

H2XS68              	100.00%		Q5ZMJ6              	100.00%
H2XK79              	73.08%		F1NBW8              	31.58%
Bootstrap support for H2XS68 as seed ortholog is 100%.
Bootstrap support for Q5ZMJ6 as seed ortholog is 99%.

Group of orthologs #1505. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 G.gallus:304

F6VAX6              	100.00%		E1BWC6              	100.00%
Bootstrap support for F6VAX6 as seed ortholog is 100%.
Bootstrap support for E1BWC6 as seed ortholog is 100%.

Group of orthologs #1506. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 G.gallus:466

F6Z9I2              	100.00%		E1BYG4              	100.00%
Bootstrap support for F6Z9I2 as seed ortholog is 100%.
Bootstrap support for E1BYG4 as seed ortholog is 100%.

Group of orthologs #1507. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 G.gallus:466

F6RNB7              	100.00%		F1P5J8              	100.00%
Bootstrap support for F6RNB7 as seed ortholog is 100%.
Bootstrap support for F1P5J8 as seed ortholog is 100%.

Group of orthologs #1508. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:371

F6UF46              	100.00%		F1P1V2              	100.00%
Bootstrap support for F6UF46 as seed ortholog is 98%.
Bootstrap support for F1P1V2 as seed ortholog is 100%.

Group of orthologs #1509. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 G.gallus:371

H2XZV4              	100.00%		E1BVN4              	100.00%
Bootstrap support for H2XZV4 as seed ortholog is 100%.
Bootstrap support for E1BVN4 as seed ortholog is 100%.

Group of orthologs #1510. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 G.gallus:466

H2XNG1              	100.00%		F1NL86              	100.00%
Bootstrap support for H2XNG1 as seed ortholog is 100%.
Bootstrap support for F1NL86 as seed ortholog is 100%.

Group of orthologs #1511. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 G.gallus:220

H2XXD3              	100.00%		F1NJ64              	100.00%
Bootstrap support for H2XXD3 as seed ortholog is 100%.
Bootstrap support for F1NJ64 as seed ortholog is 100%.

Group of orthologs #1512. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 G.gallus:183

F6TU49              	100.00%		E1BZQ4              	100.00%
Bootstrap support for F6TU49 as seed ortholog is 100%.
Bootstrap support for E1BZQ4 as seed ortholog is 99%.

Group of orthologs #1513. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 G.gallus:465

F6WJV4              	100.00%		F1NFV8              	100.00%
Bootstrap support for F6WJV4 as seed ortholog is 100%.
Bootstrap support for F1NFV8 as seed ortholog is 100%.

Group of orthologs #1514. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 G.gallus:351

F6XB39              	100.00%		F1P0C8              	100.00%
Bootstrap support for F6XB39 as seed ortholog is 100%.
Bootstrap support for F1P0C8 as seed ortholog is 100%.

Group of orthologs #1515. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 G.gallus:465

Q95YJ5              	100.00%		E1BXX8              	100.00%
Bootstrap support for Q95YJ5 as seed ortholog is 100%.
Bootstrap support for E1BXX8 as seed ortholog is 100%.

Group of orthologs #1516. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 G.gallus:465

F6YTX7              	100.00%		Q5H7N8              	100.00%
Bootstrap support for F6YTX7 as seed ortholog is 100%.
Bootstrap support for Q5H7N8 as seed ortholog is 100%.

Group of orthologs #1517. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 G.gallus:464

H2Y3E3              	100.00%		F1NUA3              	100.00%
                    	       		Q2PC93              	54.98%
Bootstrap support for H2Y3E3 as seed ortholog is 100%.
Bootstrap support for F1NUA3 as seed ortholog is 100%.

Group of orthologs #1518. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 G.gallus:376

F6QAT1              	100.00%		E1BZM0              	100.00%
Bootstrap support for F6QAT1 as seed ortholog is 100%.
Bootstrap support for E1BZM0 as seed ortholog is 100%.

Group of orthologs #1519. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 G.gallus:464

F6XUX1              	100.00%		E1BSF5              	100.00%
Bootstrap support for F6XUX1 as seed ortholog is 100%.
Bootstrap support for E1BSF5 as seed ortholog is 100%.

Group of orthologs #1520. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 G.gallus:417

F7BQ53              	100.00%		Q5F3D7              	100.00%
Bootstrap support for F7BQ53 as seed ortholog is 100%.
Bootstrap support for Q5F3D7 as seed ortholog is 100%.

Group of orthologs #1521. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 G.gallus:463

F6Q643              	100.00%		F1P176              	100.00%
                    	       		F1NVB0              	26.83%
                    	       		E1C9C1              	23.85%
Bootstrap support for F6Q643 as seed ortholog is 100%.
Bootstrap support for F1P176 as seed ortholog is 100%.

Group of orthologs #1522. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 G.gallus:463

F7BQ44              	100.00%		F1NR46              	100.00%
                    	       		Q5ZME7              	46.30%
                    	       		F1P3X6              	41.99%
Bootstrap support for F7BQ44 as seed ortholog is 100%.
Bootstrap support for F1NR46 as seed ortholog is 100%.

Group of orthologs #1523. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 G.gallus:463

F7ALU0              	100.00%		E1BVA1              	100.00%
                    	       		E1C8U4              	17.25%
Bootstrap support for F7ALU0 as seed ortholog is 100%.
Bootstrap support for E1BVA1 as seed ortholog is 100%.

Group of orthologs #1524. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 G.gallus:463

F6UE58              	100.00%		Q5ZJ27              	100.00%
                    	       		F1NKH3              	11.55%
Bootstrap support for F6UE58 as seed ortholog is 100%.
Bootstrap support for Q5ZJ27 as seed ortholog is 100%.

Group of orthologs #1525. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 G.gallus:391

F6TIY7              	100.00%		Q7T2T1              	100.00%
                    	       		Q5F3T7              	60.49%
Bootstrap support for F6TIY7 as seed ortholog is 100%.
Bootstrap support for Q7T2T1 as seed ortholog is 100%.

Group of orthologs #1526. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 G.gallus:463

F7B330              	100.00%		E1BT78              	100.00%
Bootstrap support for F7B330 as seed ortholog is 100%.
Bootstrap support for E1BT78 as seed ortholog is 100%.

Group of orthologs #1527. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 G.gallus:463

F6Z6L1              	100.00%		E1C608              	100.00%
Bootstrap support for F6Z6L1 as seed ortholog is 100%.
Bootstrap support for E1C608 as seed ortholog is 100%.

Group of orthologs #1528. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 G.gallus:463

F6XP34              	100.00%		F1NHQ4              	100.00%
Bootstrap support for F6XP34 as seed ortholog is 100%.
Bootstrap support for F1NHQ4 as seed ortholog is 100%.

Group of orthologs #1529. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 G.gallus:463

F6WNN3              	100.00%		F1NPH9              	100.00%
Bootstrap support for F6WNN3 as seed ortholog is 100%.
Bootstrap support for F1NPH9 as seed ortholog is 100%.

Group of orthologs #1530. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 G.gallus:463

F6PGY3              	100.00%		Q6PKI8              	100.00%
Bootstrap support for F6PGY3 as seed ortholog is 100%.
Bootstrap support for Q6PKI8 as seed ortholog is 100%.

Group of orthologs #1531. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 G.gallus:463

F6VT08              	100.00%		Q5F426              	100.00%
Bootstrap support for F6VT08 as seed ortholog is 100%.
Bootstrap support for Q5F426 as seed ortholog is 100%.

Group of orthologs #1532. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 G.gallus:463

F7AB27              	100.00%		F1P1J3              	100.00%
Bootstrap support for F7AB27 as seed ortholog is 100%.
Bootstrap support for F1P1J3 as seed ortholog is 100%.

Group of orthologs #1533. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 G.gallus:349

F6ZU35              	100.00%		Q802T2              	100.00%
Bootstrap support for F6ZU35 as seed ortholog is 100%.
Bootstrap support for Q802T2 as seed ortholog is 100%.

Group of orthologs #1534. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 G.gallus:139

F6UUU5              	100.00%		F1P5Y9              	100.00%
                    	       		Q7T1A0              	60.15%
                    	       		Q9YGX8              	39.85%
                    	       		F1NVS7              	33.14%
                    	       		E1C6I6              	32.38%
                    	       		Q7T199              	27.59%
Bootstrap support for F6UUU5 as seed ortholog is 99%.
Bootstrap support for F1P5Y9 as seed ortholog is 99%.

Group of orthologs #1535. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 G.gallus:104

H2XLQ1              	100.00%		E1BQF1              	100.00%
                    	       		E1BVK1              	58.60%
                    	       		E1BT47              	15.36%
                    	       		F1NI71              	14.92%
                    	       		F1NY34              	12.71%
Bootstrap support for H2XLQ1 as seed ortholog is 99%.
Bootstrap support for E1BQF1 as seed ortholog is 96%.

Group of orthologs #1536. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 G.gallus:462

F6U959              	100.00%		F1P092              	100.00%
                    	       		F1P5P9              	49.00%
Bootstrap support for F6U959 as seed ortholog is 100%.
Bootstrap support for F1P092 as seed ortholog is 100%.

Group of orthologs #1537. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 G.gallus:462

H2Y0B3              	100.00%		F1N8R0              	100.00%
                    	       		F1P1L2              	17.72%
Bootstrap support for H2Y0B3 as seed ortholog is 100%.
Bootstrap support for F1N8R0 as seed ortholog is 100%.

Group of orthologs #1538. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 G.gallus:230

F6YEL1              	100.00%		P98165              	100.00%
                    	       		Q98931              	40.14%
Bootstrap support for F6YEL1 as seed ortholog is 99%.
Bootstrap support for P98165 as seed ortholog is 99%.

Group of orthologs #1539. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 G.gallus:462

F7A5L4              	100.00%		E1BZJ3              	100.00%
Bootstrap support for F7A5L4 as seed ortholog is 100%.
Bootstrap support for E1BZJ3 as seed ortholog is 100%.

Group of orthologs #1540. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 G.gallus:462

F6WH82              	100.00%		F1NTK1              	100.00%
Bootstrap support for F6WH82 as seed ortholog is 100%.
Bootstrap support for F1NTK1 as seed ortholog is 100%.

Group of orthologs #1541. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:462 G.gallus:462

F6ZLM3              	100.00%		P47826              	100.00%
Bootstrap support for F6ZLM3 as seed ortholog is 100%.
Bootstrap support for P47826 as seed ortholog is 100%.

Group of orthologs #1542. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 G.gallus:226

F6VND6              	100.00%		P22448              	100.00%
                    	       		Q90966              	58.81%
Bootstrap support for F6VND6 as seed ortholog is 100%.
Bootstrap support for P22448 as seed ortholog is 100%.

Group of orthologs #1543. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:461 G.gallus:461

F6Y9G9              	100.00%		Q90XD2              	100.00%
F7ADG5              	49.57%		
Bootstrap support for F6Y9G9 as seed ortholog is 100%.
Bootstrap support for Q90XD2 as seed ortholog is 100%.

Group of orthologs #1544. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:461

F6YNQ3              	100.00%		H9L0K2              	100.00%
Bootstrap support for F6YNQ3 as seed ortholog is 99%.
Bootstrap support for H9L0K2 as seed ortholog is 100%.

Group of orthologs #1545. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:461 G.gallus:63

H2XQN8              	100.00%		Q90744              	100.00%
Bootstrap support for H2XQN8 as seed ortholog is 100%.
Bootstrap support for Q90744 as seed ortholog is 96%.

Group of orthologs #1546. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 G.gallus:460

F6UB18              	100.00%		P70080              	100.00%
                    	       		E1C1M3              	57.17%
Bootstrap support for F6UB18 as seed ortholog is 100%.
Bootstrap support for P70080 as seed ortholog is 100%.

Group of orthologs #1547. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 G.gallus:460

F6YN96              	100.00%		E1BXG2              	100.00%
Bootstrap support for F6YN96 as seed ortholog is 100%.
Bootstrap support for E1BXG2 as seed ortholog is 100%.

Group of orthologs #1548. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 G.gallus:460

F6TTJ7              	100.00%		F1NQ69              	100.00%
Bootstrap support for F6TTJ7 as seed ortholog is 100%.
Bootstrap support for F1NQ69 as seed ortholog is 100%.

Group of orthologs #1549. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 G.gallus:460

F6ZS66              	100.00%		F1P1D1              	100.00%
Bootstrap support for F6ZS66 as seed ortholog is 100%.
Bootstrap support for F1P1D1 as seed ortholog is 100%.

Group of orthologs #1550. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:326

F7AKB5              	100.00%		Q5ZJH6              	100.00%
Bootstrap support for F7AKB5 as seed ortholog is 100%.
Bootstrap support for Q5ZJH6 as seed ortholog is 100%.

Group of orthologs #1551. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 G.gallus:459

F7AFK4              	100.00%		O57329              	100.00%
                    	       		O57328              	63.12%
                    	       		Q9IA06              	58.70%
Bootstrap support for F7AFK4 as seed ortholog is 91%.
Bootstrap support for O57329 as seed ortholog is 100%.

Group of orthologs #1552. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 G.gallus:156

F6PTZ3              	100.00%		E1BXR4              	100.00%
F6PUF3              	27.61%		
Bootstrap support for F6PTZ3 as seed ortholog is 62%.
Alternative seed ortholog is F6U2S1 (19 bits away from this cluster)
Bootstrap support for E1BXR4 as seed ortholog is 99%.

Group of orthologs #1553. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 G.gallus:459

F6YGR5              	100.00%		F1NCY2              	100.00%
                    	       		F1P337              	9.41%
Bootstrap support for F6YGR5 as seed ortholog is 100%.
Bootstrap support for F1NCY2 as seed ortholog is 100%.

Group of orthologs #1554. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:459 G.gallus:459

F6T5M6              	100.00%		E1BSN1              	100.00%
Bootstrap support for F6T5M6 as seed ortholog is 100%.
Bootstrap support for E1BSN1 as seed ortholog is 100%.

Group of orthologs #1555. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:459 G.gallus:459

F6YH10              	100.00%		E1BVW7              	100.00%
Bootstrap support for F6YH10 as seed ortholog is 100%.
Bootstrap support for E1BVW7 as seed ortholog is 100%.

Group of orthologs #1556. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:459 G.gallus:459

F6XQV0              	100.00%		E1C5J0              	100.00%
Bootstrap support for F6XQV0 as seed ortholog is 100%.
Bootstrap support for E1C5J0 as seed ortholog is 100%.

Group of orthologs #1557. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 G.gallus:459

H2XP90              	100.00%		F1NDY5              	100.00%
Bootstrap support for H2XP90 as seed ortholog is 63%.
Alternative seed ortholog is F7A2G6 (16 bits away from this cluster)
Bootstrap support for F1NDY5 as seed ortholog is 100%.

Group of orthologs #1558. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:459 G.gallus:459

F6ZU53              	100.00%		F1NWL2              	100.00%
Bootstrap support for F6ZU53 as seed ortholog is 100%.
Bootstrap support for F1NWL2 as seed ortholog is 100%.

Group of orthologs #1559. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 G.gallus:315

F7ANS1              	100.00%		Q5ZL94              	100.00%
Bootstrap support for F7ANS1 as seed ortholog is 99%.
Bootstrap support for Q5ZL94 as seed ortholog is 100%.

Group of orthologs #1560. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:458

H2Y2V2              	100.00%		F1P490              	100.00%
F6W254              	64.75%		F1P491              	24.78%
F6ZJI3              	5.74%		
Bootstrap support for H2Y2V2 as seed ortholog is 99%.
Bootstrap support for F1P490 as seed ortholog is 100%.

Group of orthologs #1561. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 G.gallus:458

F7B9Q3              	100.00%		F1ND55              	100.00%
                    	       		F1NYZ5              	21.05%
Bootstrap support for F7B9Q3 as seed ortholog is 100%.
Bootstrap support for F1ND55 as seed ortholog is 100%.

Group of orthologs #1562. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 G.gallus:458

F6QF37              	100.00%		Q5ZJL5              	100.00%
                    	       		F1NVD4              	44.13%
Bootstrap support for F6QF37 as seed ortholog is 100%.
Bootstrap support for Q5ZJL5 as seed ortholog is 100%.

Group of orthologs #1563. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 G.gallus:389

F6TFD0              	100.00%		F1NAZ4              	100.00%
Bootstrap support for F6TFD0 as seed ortholog is 100%.
Bootstrap support for F1NAZ4 as seed ortholog is 100%.

Group of orthologs #1564. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:158

F7B7R9              	100.00%		F1NCX5              	100.00%
Bootstrap support for F7B7R9 as seed ortholog is 98%.
Bootstrap support for F1NCX5 as seed ortholog is 99%.

Group of orthologs #1565. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 G.gallus:52

F7BDV2              	100.00%		F1NPH4              	100.00%
Bootstrap support for F7BDV2 as seed ortholog is 100%.
Bootstrap support for F1NPH4 as seed ortholog is 97%.

Group of orthologs #1566. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 G.gallus:310

H2XQ32              	100.00%		F1NN89              	100.00%
Bootstrap support for H2XQ32 as seed ortholog is 99%.
Bootstrap support for F1NN89 as seed ortholog is 100%.

Group of orthologs #1567. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 G.gallus:457

F6VI40              	100.00%		E1C7V9              	100.00%
                    	       		Q7T2U9              	51.11%
                    	       		E1BVR8              	34.48%
Bootstrap support for F6VI40 as seed ortholog is 100%.
Bootstrap support for E1C7V9 as seed ortholog is 100%.

Group of orthologs #1568. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 G.gallus:233

F6WDR9              	100.00%		Q90670              	100.00%
                    	       		Q90669              	52.25%
Bootstrap support for F6WDR9 as seed ortholog is 100%.
Bootstrap support for Q90670 as seed ortholog is 100%.

Group of orthologs #1569. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 G.gallus:457

H2XZC1              	100.00%		F1NJ46              	100.00%
                    	       		Q5ZMM1              	99.61%
Bootstrap support for H2XZC1 as seed ortholog is 100%.
Bootstrap support for F1NJ46 as seed ortholog is 100%.

Group of orthologs #1570. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 G.gallus:457

C4B8X0              	100.00%		E1C3P8              	100.00%
Bootstrap support for C4B8X0 as seed ortholog is 100%.
Bootstrap support for E1C3P8 as seed ortholog is 100%.

Group of orthologs #1571. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 G.gallus:457

F6VHI4              	100.00%		E1C0I5              	100.00%
Bootstrap support for F6VHI4 as seed ortholog is 100%.
Bootstrap support for E1C0I5 as seed ortholog is 100%.

Group of orthologs #1572. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 G.gallus:457

F6YRS8              	100.00%		E1BSL7              	100.00%
Bootstrap support for F6YRS8 as seed ortholog is 100%.
Bootstrap support for E1BSL7 as seed ortholog is 100%.

Group of orthologs #1573. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 G.gallus:457

H2XMI3              	100.00%		F1N9P5              	100.00%
Bootstrap support for H2XMI3 as seed ortholog is 100%.
Bootstrap support for F1N9P5 as seed ortholog is 100%.

Group of orthologs #1574. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 G.gallus:457

F6TJV9              	100.00%		P38024              	100.00%
Bootstrap support for F6TJV9 as seed ortholog is 100%.
Bootstrap support for P38024 as seed ortholog is 100%.

Group of orthologs #1575. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 G.gallus:124

F6X5M5              	100.00%		E1BS92              	100.00%
                    	       		F1NL18              	51.89%
Bootstrap support for F6X5M5 as seed ortholog is 100%.
Bootstrap support for E1BS92 as seed ortholog is 99%.

Group of orthologs #1576. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 G.gallus:456

H2XM50              	100.00%		E1C3J9              	100.00%
                    	       		Q5F3C1              	22.08%
Bootstrap support for H2XM50 as seed ortholog is 91%.
Bootstrap support for E1C3J9 as seed ortholog is 100%.

Group of orthologs #1577. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 G.gallus:456

H2XY03              	100.00%		E1C7Y3              	100.00%
Bootstrap support for H2XY03 as seed ortholog is 100%.
Bootstrap support for E1C7Y3 as seed ortholog is 100%.

Group of orthologs #1578. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 G.gallus:393

F6WYI2              	100.00%		Q5ZI13              	100.00%
Bootstrap support for F6WYI2 as seed ortholog is 100%.
Bootstrap support for Q5ZI13 as seed ortholog is 100%.

Group of orthologs #1579. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 G.gallus:455

F6VFM3              	100.00%		F1NX63              	100.00%
                    	       		P48984              	46.63%
                    	       		Q90701              	42.31%
Bootstrap support for F6VFM3 as seed ortholog is 100%.
Bootstrap support for F1NX63 as seed ortholog is 100%.

Group of orthologs #1580. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 G.gallus:320

F6TYX5              	100.00%		F1P2L3              	100.00%
                    	       		F1NVC5              	78.93%
                    	       		E1C8J6              	67.92%
Bootstrap support for F6TYX5 as seed ortholog is 100%.
Bootstrap support for F1P2L3 as seed ortholog is 100%.

Group of orthologs #1581. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 G.gallus:455

F6PKS2              	100.00%		F1NBQ1              	100.00%
                    	       		F1P339              	39.70%
Bootstrap support for F6PKS2 as seed ortholog is 100%.
Bootstrap support for F1NBQ1 as seed ortholog is 100%.

Group of orthologs #1582. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 G.gallus:455

F6VP14              	100.00%		E1BXI8              	100.00%
Bootstrap support for F6VP14 as seed ortholog is 100%.
Bootstrap support for E1BXI8 as seed ortholog is 100%.

Group of orthologs #1583. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 G.gallus:399

F6ZPV8              	100.00%		E1C7S2              	100.00%
Bootstrap support for F6ZPV8 as seed ortholog is 100%.
Bootstrap support for E1C7S2 as seed ortholog is 100%.

Group of orthologs #1584. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 G.gallus:108

F6QXU2              	100.00%		F1P3D7              	100.00%
Bootstrap support for F6QXU2 as seed ortholog is 99%.
Bootstrap support for F1P3D7 as seed ortholog is 99%.

Group of orthologs #1585. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 G.gallus:455

F6YNH3              	100.00%		F1NGP0              	100.00%
Bootstrap support for F6YNH3 as seed ortholog is 100%.
Bootstrap support for F1NGP0 as seed ortholog is 100%.

Group of orthologs #1586. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 G.gallus:28

F6YEI6              	100.00%		Q5F3L5              	100.00%
Bootstrap support for F6YEI6 as seed ortholog is 100%.
Bootstrap support for Q5F3L5 as seed ortholog is 87%.

Group of orthologs #1587. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:454

F6R3U4              	100.00%		F1NSP8              	100.00%
Bootstrap support for F6R3U4 as seed ortholog is 98%.
Bootstrap support for F1NSP8 as seed ortholog is 100%.

Group of orthologs #1588. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:317

F7ACA9              	100.00%		F1P5T2              	100.00%
Bootstrap support for F7ACA9 as seed ortholog is 100%.
Bootstrap support for F1P5T2 as seed ortholog is 100%.

Group of orthologs #1589. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:190

F7AQQ6              	100.00%		F1NG13              	100.00%
F6QUA3              	100.00%		F1NJH2              	100.00%
                    	       		Q01841              	100.00%
                    	       		E1BY44              	93.23%
                    	       		F1NG12              	22.92%
Bootstrap support for F7AQQ6 as seed ortholog is 91%.
Bootstrap support for F6QUA3 as seed ortholog is 74%.
Alternative seed ortholog is F6V6G1 (76 bits away from this cluster)
Bootstrap support for F1NG13 as seed ortholog is 99%.
Bootstrap support for F1NJH2 as seed ortholog is 99%.
Bootstrap support for Q01841 as seed ortholog is 99%.

Group of orthologs #1590. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 G.gallus:453

F6UZS7              	100.00%		F1NFY2              	100.00%
                    	       		F1P0W8              	40.48%
Bootstrap support for F6UZS7 as seed ortholog is 100%.
Bootstrap support for F1NFY2 as seed ortholog is 100%.

Group of orthologs #1591. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 G.gallus:453

F6T0X5              	100.00%		E1C569              	100.00%
Bootstrap support for F6T0X5 as seed ortholog is 100%.
Bootstrap support for E1C569 as seed ortholog is 100%.

Group of orthologs #1592. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 G.gallus:453

F6SSX2              	100.00%		F1NHL4              	100.00%
Bootstrap support for F6SSX2 as seed ortholog is 100%.
Bootstrap support for F1NHL4 as seed ortholog is 100%.

Group of orthologs #1593. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 G.gallus:167

F6U7S8              	100.00%		F1NU24              	100.00%
Bootstrap support for F6U7S8 as seed ortholog is 99%.
Bootstrap support for F1NU24 as seed ortholog is 99%.

Group of orthologs #1594. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 G.gallus:242

F7AZI8              	100.00%		E1C8L2              	100.00%
Bootstrap support for F7AZI8 as seed ortholog is 100%.
Bootstrap support for E1C8L2 as seed ortholog is 100%.

Group of orthologs #1595. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 G.gallus:453

F6ZF56              	100.00%		F1NZ34              	100.00%
Bootstrap support for F6ZF56 as seed ortholog is 100%.
Bootstrap support for F1NZ34 as seed ortholog is 100%.

Group of orthologs #1596. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:452 G.gallus:452

F6XVH7              	100.00%		F1NH26              	100.00%
Bootstrap support for F6XVH7 as seed ortholog is 100%.
Bootstrap support for F1NH26 as seed ortholog is 100%.

Group of orthologs #1597. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:451 G.gallus:451

F6QIL3              	100.00%		F1P3W1              	100.00%
                    	       		F1NQJ5              	46.65%
                    	       		H9L038              	37.08%
Bootstrap support for F6QIL3 as seed ortholog is 100%.
Bootstrap support for F1P3W1 as seed ortholog is 100%.

Group of orthologs #1598. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 G.gallus:451

F6TS86              	100.00%		E1BRU9              	100.00%
Bootstrap support for F6TS86 as seed ortholog is 99%.
Bootstrap support for E1BRU9 as seed ortholog is 100%.

Group of orthologs #1599. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:451 G.gallus:451

F6WFL4              	100.00%		E1C591              	100.00%
Bootstrap support for F6WFL4 as seed ortholog is 100%.
Bootstrap support for E1C591 as seed ortholog is 100%.

Group of orthologs #1600. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:451 G.gallus:451

H2XL83              	100.00%		F1N9P9              	100.00%
Bootstrap support for H2XL83 as seed ortholog is 100%.
Bootstrap support for F1N9P9 as seed ortholog is 100%.

Group of orthologs #1601. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:451 G.gallus:451

F7AUL7              	100.00%		F1NS60              	100.00%
Bootstrap support for F7AUL7 as seed ortholog is 100%.
Bootstrap support for F1NS60 as seed ortholog is 100%.

Group of orthologs #1602. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 G.gallus:374

F6Z188              	100.00%		F1P5X5              	100.00%
Bootstrap support for F6Z188 as seed ortholog is 100%.
Bootstrap support for F1P5X5 as seed ortholog is 100%.

Group of orthologs #1603. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 G.gallus:451

F7B7E9              	100.00%		F1P137              	100.00%
Bootstrap support for F7B7E9 as seed ortholog is 100%.
Bootstrap support for F1P137 as seed ortholog is 100%.

Group of orthologs #1604. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 G.gallus:327

F6YVQ9              	100.00%		F1NP55              	100.00%
                    	       		E1C5K2              	43.80%
Bootstrap support for F6YVQ9 as seed ortholog is 100%.
Bootstrap support for F1NP55 as seed ortholog is 100%.

Group of orthologs #1605. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 G.gallus:302

Q4H383              	100.00%		Q5ZIF0              	100.00%
                    	       		Q90891              	55.33%
Bootstrap support for Q4H383 as seed ortholog is 100%.
Bootstrap support for Q5ZIF0 as seed ortholog is 100%.

Group of orthologs #1606. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 G.gallus:199

F6UAS2              	100.00%		E1BU03              	100.00%
Bootstrap support for F6UAS2 as seed ortholog is 100%.
Bootstrap support for E1BU03 as seed ortholog is 99%.

Group of orthologs #1607. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 G.gallus:450

H2XT24              	100.00%		E1C1K6              	100.00%
Bootstrap support for H2XT24 as seed ortholog is 100%.
Bootstrap support for E1C1K6 as seed ortholog is 100%.

Group of orthologs #1608. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 G.gallus:292

F6RS66              	100.00%		Q0GGW5              	100.00%
Bootstrap support for F6RS66 as seed ortholog is 100%.
Bootstrap support for Q0GGW5 as seed ortholog is 100%.

Group of orthologs #1609. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 G.gallus:450

H2XWE4              	100.00%		E1C4M0              	100.00%
Bootstrap support for H2XWE4 as seed ortholog is 100%.
Bootstrap support for E1C4M0 as seed ortholog is 100%.

Group of orthologs #1610. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 G.gallus:402

F7ACM5              	100.00%		F1NXP2              	100.00%
Bootstrap support for F7ACM5 as seed ortholog is 100%.
Bootstrap support for F1NXP2 as seed ortholog is 100%.

Group of orthologs #1611. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 G.gallus:13

F6YV05              	100.00%		F1NDQ8              	100.00%
F6SW71              	41.73%		
F6WZZ7              	11.39%		
Bootstrap support for F6YV05 as seed ortholog is 100%.
Bootstrap support for F1NDQ8 as seed ortholog is 56%.
Alternative seed ortholog is F1NDM7 (13 bits away from this cluster)

Group of orthologs #1612. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 G.gallus:144

F6YCW2              	100.00%		F1P5U2              	100.00%
F6V0N3              	61.61%		E1C1Q7              	25.41%
Bootstrap support for F6YCW2 as seed ortholog is 100%.
Bootstrap support for F1P5U2 as seed ortholog is 99%.

Group of orthologs #1613. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 G.gallus:449

H2XQV8              	100.00%		E1BW13              	100.00%
Bootstrap support for H2XQV8 as seed ortholog is 100%.
Bootstrap support for E1BW13 as seed ortholog is 100%.

Group of orthologs #1614. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 G.gallus:328

F6RTW0              	100.00%		Q5ZL16              	100.00%
Bootstrap support for F6RTW0 as seed ortholog is 99%.
Bootstrap support for Q5ZL16 as seed ortholog is 100%.

Group of orthologs #1615. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 G.gallus:246

F6XXW0              	100.00%		F1P3T1              	100.00%
Bootstrap support for F6XXW0 as seed ortholog is 100%.
Bootstrap support for F1P3T1 as seed ortholog is 100%.

Group of orthologs #1616. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 G.gallus:448

F6R906              	100.00%		F1NXX0              	100.00%
                    	       		F1NZL5              	58.14%
Bootstrap support for F6R906 as seed ortholog is 100%.
Bootstrap support for F1NXX0 as seed ortholog is 100%.

Group of orthologs #1617. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 G.gallus:97

H2XNY7              	100.00%		F1NJ93              	100.00%
Bootstrap support for H2XNY7 as seed ortholog is 100%.
Bootstrap support for F1NJ93 as seed ortholog is 98%.

Group of orthologs #1618. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 G.gallus:398

F7BLS5              	100.00%		H9L061              	100.00%
Bootstrap support for F7BLS5 as seed ortholog is 100%.
Bootstrap support for H9L061 as seed ortholog is 100%.

Group of orthologs #1619. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 G.gallus:325

H2XKS2              	100.00%		E1C746              	100.00%
                    	       		F1NI53              	38.24%
                    	       		E1C726              	32.52%
Bootstrap support for H2XKS2 as seed ortholog is 100%.
Bootstrap support for E1C746 as seed ortholog is 100%.

Group of orthologs #1620. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 G.gallus:198

B1H3L8              	100.00%		F1NV99              	100.00%
                    	       		P36196              	21.79%
Bootstrap support for B1H3L8 as seed ortholog is 99%.
Bootstrap support for F1NV99 as seed ortholog is 99%.

Group of orthologs #1621. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 G.gallus:447

F6VW40              	100.00%		F1NS24              	100.00%
Bootstrap support for F6VW40 as seed ortholog is 100%.
Bootstrap support for F1NS24 as seed ortholog is 100%.

Group of orthologs #1622. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 G.gallus:280

F6YS00              	100.00%		F1NWG5              	100.00%
Bootstrap support for F6YS00 as seed ortholog is 100%.
Bootstrap support for F1NWG5 as seed ortholog is 100%.

Group of orthologs #1623. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 G.gallus:447

F6ZTX9              	100.00%		F1P0F6              	100.00%
Bootstrap support for F6ZTX9 as seed ortholog is 100%.
Bootstrap support for F1P0F6 as seed ortholog is 100%.

Group of orthologs #1624. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 G.gallus:446

F7BKI5              	100.00%		F1N906              	100.00%
                    	       		E1C878              	34.97%
Bootstrap support for F7BKI5 as seed ortholog is 100%.
Bootstrap support for F1N906 as seed ortholog is 100%.

Group of orthologs #1625. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 G.gallus:446

F6YEH2              	100.00%		F1NNU4              	100.00%
                    	       		F1NWB0              	38.42%
Bootstrap support for F6YEH2 as seed ortholog is 100%.
Bootstrap support for F1NNU4 as seed ortholog is 100%.

Group of orthologs #1626. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:328

F6Z8G0              	100.00%		Q8AYC9              	100.00%
                    	       		F1NLQ8              	10.73%
Bootstrap support for F6Z8G0 as seed ortholog is 100%.
Bootstrap support for Q8AYC9 as seed ortholog is 100%.

Group of orthologs #1627. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 G.gallus:347

F7BJM0              	100.00%		Q8QFP8              	100.00%
                    	       		P53666              	28.69%
Bootstrap support for F7BJM0 as seed ortholog is 100%.
Bootstrap support for Q8QFP8 as seed ortholog is 100%.

Group of orthologs #1628. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 G.gallus:446

F6YYW3              	100.00%		F1P4V4              	100.00%
Bootstrap support for F6YYW3 as seed ortholog is 100%.
Bootstrap support for F1P4V4 as seed ortholog is 100%.

Group of orthologs #1629. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 G.gallus:446

H2XXL7              	100.00%		H9L0K4              	100.00%
Bootstrap support for H2XXL7 as seed ortholog is 100%.
Bootstrap support for H9L0K4 as seed ortholog is 100%.

Group of orthologs #1630. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:445 G.gallus:445

F7B568              	100.00%		F1NBD0              	100.00%
                    	       		F1NJ94              	21.05%
Bootstrap support for F7B568 as seed ortholog is 100%.
Bootstrap support for F1NBD0 as seed ortholog is 100%.

Group of orthologs #1631. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:445 G.gallus:445

F6TDN1              	100.00%		E1C3J3              	100.00%
Bootstrap support for F6TDN1 as seed ortholog is 100%.
Bootstrap support for E1C3J3 as seed ortholog is 100%.

Group of orthologs #1632. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:445 G.gallus:445

F6Q512              	100.00%		F1NMU0              	100.00%
Bootstrap support for F6Q512 as seed ortholog is 100%.
Bootstrap support for F1NMU0 as seed ortholog is 100%.

Group of orthologs #1633. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:445 G.gallus:445

F6TWQ7              	100.00%		F1NJN2              	100.00%
Bootstrap support for F6TWQ7 as seed ortholog is 100%.
Bootstrap support for F1NJN2 as seed ortholog is 100%.

Group of orthologs #1634. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:445 G.gallus:172

F7AGU6              	100.00%		F1NAV0              	100.00%
Bootstrap support for F7AGU6 as seed ortholog is 100%.
Bootstrap support for F1NAV0 as seed ortholog is 100%.

Group of orthologs #1635. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:445 G.gallus:445

H2XK75              	100.00%		F1NPI8              	100.00%
Bootstrap support for H2XK75 as seed ortholog is 100%.
Bootstrap support for F1NPI8 as seed ortholog is 100%.

Group of orthologs #1636. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:445 G.gallus:392

H2XTB4              	100.00%		F1NGH8              	100.00%
Bootstrap support for H2XTB4 as seed ortholog is 100%.
Bootstrap support for F1NGH8 as seed ortholog is 100%.

Group of orthologs #1637. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 G.gallus:444

F7AX33              	100.00%		E1C6V6              	100.00%
                    	       		E1BSR1              	19.89%
Bootstrap support for F7AX33 as seed ortholog is 100%.
Bootstrap support for E1C6V6 as seed ortholog is 100%.

Group of orthologs #1638. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 G.gallus:257

F6TV83              	100.00%		Q75R65              	100.00%
                    	       		F1NMJ9              	25.37%
Bootstrap support for F6TV83 as seed ortholog is 99%.
Bootstrap support for Q75R65 as seed ortholog is 99%.

Group of orthologs #1639. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 G.gallus:199

F6Z781              	100.00%		F1P2G1              	100.00%
Bootstrap support for F6Z781 as seed ortholog is 100%.
Bootstrap support for F1P2G1 as seed ortholog is 100%.

Group of orthologs #1640. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 G.gallus:443

F6YHC8              	100.00%		F1P0C1              	100.00%
                    	       		F1NK97              	32.33%
Bootstrap support for F6YHC8 as seed ortholog is 100%.
Bootstrap support for F1P0C1 as seed ortholog is 100%.

Group of orthologs #1641. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 G.gallus:443

F6ZY58              	100.00%		H9L023              	100.00%
                    	       		Q5ZJH2              	81.00%
Bootstrap support for F6ZY58 as seed ortholog is 100%.
Bootstrap support for H9L023 as seed ortholog is 100%.

Group of orthologs #1642. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:443 G.gallus:443

F7AHK9              	100.00%		F1P332              	100.00%
Bootstrap support for F7AHK9 as seed ortholog is 100%.
Bootstrap support for F1P332 as seed ortholog is 100%.

Group of orthologs #1643. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 G.gallus:442

F6U254              	100.00%		F1NPR9              	100.00%
                    	       		E1C2N3              	30.04%
Bootstrap support for F6U254 as seed ortholog is 100%.
Bootstrap support for F1NPR9 as seed ortholog is 100%.

Group of orthologs #1644. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 G.gallus:442

F6QSJ0              	100.00%		E1BSA8              	100.00%
Bootstrap support for F6QSJ0 as seed ortholog is 100%.
Bootstrap support for E1BSA8 as seed ortholog is 100%.

Group of orthologs #1645. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 G.gallus:393

F6PK80              	100.00%		E1C9H5              	100.00%
Bootstrap support for F6PK80 as seed ortholog is 99%.
Bootstrap support for E1C9H5 as seed ortholog is 100%.

Group of orthologs #1646. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 G.gallus:442

F6U4Y0              	100.00%		E1C846              	100.00%
Bootstrap support for F6U4Y0 as seed ortholog is 100%.
Bootstrap support for E1C846 as seed ortholog is 100%.

Group of orthologs #1647. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 G.gallus:252

F6SUL1              	100.00%		F1NFZ1              	100.00%
Bootstrap support for F6SUL1 as seed ortholog is 100%.
Bootstrap support for F1NFZ1 as seed ortholog is 100%.

Group of orthologs #1648. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 G.gallus:442

F6VEG5              	100.00%		F1P057              	100.00%
Bootstrap support for F6VEG5 as seed ortholog is 100%.
Bootstrap support for F1P057 as seed ortholog is 100%.

Group of orthologs #1649. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 G.gallus:441

H2XL27              	100.00%		E1C6K9              	100.00%
                    	       		E1BYS2              	29.93%
Bootstrap support for H2XL27 as seed ortholog is 100%.
Bootstrap support for E1C6K9 as seed ortholog is 100%.

Group of orthologs #1650. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 G.gallus:441

F6QE47              	100.00%		F1N873              	100.00%
Bootstrap support for F6QE47 as seed ortholog is 100%.
Bootstrap support for F1N873 as seed ortholog is 100%.

Group of orthologs #1651. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 G.gallus:441

F6ZHM4              	100.00%		E1BZP9              	100.00%
Bootstrap support for F6ZHM4 as seed ortholog is 100%.
Bootstrap support for E1BZP9 as seed ortholog is 100%.

Group of orthologs #1652. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 G.gallus:353

F6ZAX4              	100.00%		F1NVU9              	100.00%
Bootstrap support for F6ZAX4 as seed ortholog is 100%.
Bootstrap support for F1NVU9 as seed ortholog is 100%.

Group of orthologs #1653. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 G.gallus:441

F7AAC1              	100.00%		P55080              	100.00%
Bootstrap support for F7AAC1 as seed ortholog is 100%.
Bootstrap support for P55080 as seed ortholog is 100%.

Group of orthologs #1654. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 G.gallus:441

H2XR99              	100.00%		H9KYV0              	100.00%
Bootstrap support for H2XR99 as seed ortholog is 100%.
Bootstrap support for H9KYV0 as seed ortholog is 100%.

Group of orthologs #1655. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 G.gallus:441

Q4H352              	100.00%		H9KZT7              	100.00%
Bootstrap support for Q4H352 as seed ortholog is 100%.
Bootstrap support for H9KZT7 as seed ortholog is 100%.

Group of orthologs #1656. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 G.gallus:135

F6YD02              	100.00%		Q5ZJ01              	100.00%
                    	       		Q5ZJX1              	25.79%
Bootstrap support for F6YD02 as seed ortholog is 100%.
Bootstrap support for Q5ZJ01 as seed ortholog is 100%.

Group of orthologs #1657. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 G.gallus:440

F7AAE8              	100.00%		E1BSR5              	100.00%
Bootstrap support for F7AAE8 as seed ortholog is 100%.
Bootstrap support for E1BSR5 as seed ortholog is 100%.

Group of orthologs #1658. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 G.gallus:333

F6PW34              	100.00%		F1NUK8              	100.00%
Bootstrap support for F6PW34 as seed ortholog is 100%.
Bootstrap support for F1NUK8 as seed ortholog is 100%.

Group of orthologs #1659. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 G.gallus:440

F6ZGT0              	100.00%		E1C1F5              	100.00%
Bootstrap support for F6ZGT0 as seed ortholog is 100%.
Bootstrap support for E1C1F5 as seed ortholog is 100%.

Group of orthologs #1660. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 G.gallus:440

F6PJU1              	100.00%		Q5ZJV4              	100.00%
Bootstrap support for F6PJU1 as seed ortholog is 100%.
Bootstrap support for Q5ZJV4 as seed ortholog is 100%.

Group of orthologs #1661. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 G.gallus:440

F6YIY8              	100.00%		F1NPV8              	100.00%
Bootstrap support for F6YIY8 as seed ortholog is 100%.
Bootstrap support for F1NPV8 as seed ortholog is 100%.

Group of orthologs #1662. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 G.gallus:440

F6YWB6              	100.00%		F1NZA0              	100.00%
Bootstrap support for F6YWB6 as seed ortholog is 100%.
Bootstrap support for F1NZA0 as seed ortholog is 100%.

Group of orthologs #1663. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:170

F6RD62              	100.00%		E1BWM6              	100.00%
                    	       		F1NVF4              	10.34%
Bootstrap support for F6RD62 as seed ortholog is 99%.
Bootstrap support for E1BWM6 as seed ortholog is 100%.

Group of orthologs #1664. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 G.gallus:439

F6V6R4              	100.00%		E1C917              	100.00%
                    	       		E1C0W7              	33.46%
Bootstrap support for F6V6R4 as seed ortholog is 100%.
Bootstrap support for E1C917 as seed ortholog is 100%.

Group of orthologs #1665. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 G.gallus:439

F6QHD2              	100.00%		F1NSN2              	100.00%
                    	       		F1N8F9              	26.82%
Bootstrap support for F6QHD2 as seed ortholog is 100%.
Bootstrap support for F1NSN2 as seed ortholog is 100%.

Group of orthologs #1666. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 G.gallus:306

F6S4S1              	100.00%		F1N9J6              	100.00%
Bootstrap support for F6S4S1 as seed ortholog is 100%.
Bootstrap support for F1N9J6 as seed ortholog is 100%.

Group of orthologs #1667. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 G.gallus:438

F6R5Z4              	100.00%		F1ND46              	100.00%
Bootstrap support for F6R5Z4 as seed ortholog is 100%.
Bootstrap support for F1ND46 as seed ortholog is 100%.

Group of orthologs #1668. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 G.gallus:438

F6WXB6              	100.00%		E1C3V4              	100.00%
Bootstrap support for F6WXB6 as seed ortholog is 65%.
Alternative seed ortholog is F6Q6E0 (16 bits away from this cluster)
Bootstrap support for E1C3V4 as seed ortholog is 100%.

Group of orthologs #1669. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 G.gallus:438

F6VAF3              	100.00%		F1NCU7              	100.00%
Bootstrap support for F6VAF3 as seed ortholog is 100%.
Bootstrap support for F1NCU7 as seed ortholog is 100%.

Group of orthologs #1670. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 G.gallus:438

F6UZR0              	100.00%		F1NLE8              	100.00%
Bootstrap support for F6UZR0 as seed ortholog is 100%.
Bootstrap support for F1NLE8 as seed ortholog is 100%.

Group of orthologs #1671. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 G.gallus:127

F6QSR3              	100.00%		E1C9G0              	100.00%
                    	       		E1C388              	6.32%
Bootstrap support for F6QSR3 as seed ortholog is 100%.
Bootstrap support for E1C9G0 as seed ortholog is 99%.

Group of orthologs #1672. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 G.gallus:437

F6S5I8              	100.00%		E1C4B3              	100.00%
Bootstrap support for F6S5I8 as seed ortholog is 100%.
Bootstrap support for E1C4B3 as seed ortholog is 100%.

Group of orthologs #1673. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 G.gallus:246

F7AL38              	100.00%		E1C0T5              	100.00%
Bootstrap support for F7AL38 as seed ortholog is 100%.
Bootstrap support for E1C0T5 as seed ortholog is 99%.

Group of orthologs #1674. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 G.gallus:208

H2XRB5              	100.00%		F1NB98              	100.00%
F6U8G8              	9.72%		
Bootstrap support for H2XRB5 as seed ortholog is 100%.
Bootstrap support for F1NB98 as seed ortholog is 99%.

Group of orthologs #1675. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 G.gallus:436

F6RJV3              	100.00%		F1N9U8              	100.00%
Bootstrap support for F6RJV3 as seed ortholog is 100%.
Bootstrap support for F1N9U8 as seed ortholog is 100%.

Group of orthologs #1676. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 G.gallus:436

F7A1S8              	100.00%		E1C3M4              	100.00%
Bootstrap support for F7A1S8 as seed ortholog is 100%.
Bootstrap support for E1C3M4 as seed ortholog is 100%.

Group of orthologs #1677. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 G.gallus:436

F6ZCY4              	100.00%		F1NAT3              	100.00%
Bootstrap support for F6ZCY4 as seed ortholog is 100%.
Bootstrap support for F1NAT3 as seed ortholog is 100%.

Group of orthologs #1678. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 G.gallus:353

F6VSD5              	100.00%		F1P3N0              	100.00%
Bootstrap support for F6VSD5 as seed ortholog is 100%.
Bootstrap support for F1P3N0 as seed ortholog is 100%.

Group of orthologs #1679. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 G.gallus:307

H2XR49              	100.00%		F1P2V2              	100.00%
Bootstrap support for H2XR49 as seed ortholog is 100%.
Bootstrap support for F1P2V2 as seed ortholog is 100%.

Group of orthologs #1680. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 G.gallus:436

H2Y005              	100.00%		F1NUR6              	100.00%
Bootstrap support for H2Y005 as seed ortholog is 100%.
Bootstrap support for F1NUR6 as seed ortholog is 100%.

Group of orthologs #1681. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 G.gallus:368

F6S9Y0              	100.00%		F1NWE5              	100.00%
Bootstrap support for F6S9Y0 as seed ortholog is 98%.
Bootstrap support for F1NWE5 as seed ortholog is 100%.

Group of orthologs #1682. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 G.gallus:141

H2XSD2              	100.00%		F1NJI9              	100.00%
Bootstrap support for H2XSD2 as seed ortholog is 100%.
Bootstrap support for F1NJI9 as seed ortholog is 99%.

Group of orthologs #1683. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 G.gallus:435

H2XPV2              	100.00%		Q5ZJ71              	100.00%
Bootstrap support for H2XPV2 as seed ortholog is 100%.
Bootstrap support for Q5ZJ71 as seed ortholog is 100%.

Group of orthologs #1684. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 G.gallus:435

H2Y3K9              	100.00%		Q5ZME2              	100.00%
Bootstrap support for H2Y3K9 as seed ortholog is 100%.
Bootstrap support for Q5ZME2 as seed ortholog is 100%.

Group of orthologs #1685. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 G.gallus:434

Q8T880              	100.00%		F1P406              	100.00%
F7AEU0              	98.58%		
Bootstrap support for Q8T880 as seed ortholog is 100%.
Bootstrap support for F1P406 as seed ortholog is 100%.

Group of orthologs #1686. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 G.gallus:434

F6U602              	100.00%		E1C073              	100.00%
Bootstrap support for F6U602 as seed ortholog is 100%.
Bootstrap support for E1C073 as seed ortholog is 100%.

Group of orthologs #1687. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 G.gallus:434

F6QE16              	100.00%		F1NB62              	100.00%
Bootstrap support for F6QE16 as seed ortholog is 100%.
Bootstrap support for F1NB62 as seed ortholog is 100%.

Group of orthologs #1688. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 G.gallus:390

F6Q096              	100.00%		F1NIX0              	100.00%
Bootstrap support for F6Q096 as seed ortholog is 100%.
Bootstrap support for F1NIX0 as seed ortholog is 100%.

Group of orthologs #1689. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 G.gallus:434

F6YHB0              	100.00%		E1BWG5              	100.00%
Bootstrap support for F6YHB0 as seed ortholog is 100%.
Bootstrap support for E1BWG5 as seed ortholog is 100%.

Group of orthologs #1690. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 G.gallus:434

F6X600              	100.00%		F1NBI2              	100.00%
Bootstrap support for F6X600 as seed ortholog is 100%.
Bootstrap support for F1NBI2 as seed ortholog is 100%.

Group of orthologs #1691. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 G.gallus:434

F7ASJ4              	100.00%		E1C502              	100.00%
Bootstrap support for F7ASJ4 as seed ortholog is 100%.
Bootstrap support for E1C502 as seed ortholog is 100%.

Group of orthologs #1692. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 G.gallus:434

F6SZ94              	100.00%		F1NWF2              	100.00%
Bootstrap support for F6SZ94 as seed ortholog is 100%.
Bootstrap support for F1NWF2 as seed ortholog is 100%.

Group of orthologs #1693. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 G.gallus:434

H2XU61              	100.00%		F1P5I8              	100.00%
Bootstrap support for H2XU61 as seed ortholog is 100%.
Bootstrap support for F1P5I8 as seed ortholog is 100%.

Group of orthologs #1694. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 G.gallus:331

H2XPM6              	100.00%		Q5ZJH5              	100.00%
Bootstrap support for H2XPM6 as seed ortholog is 100%.
Bootstrap support for Q5ZJH5 as seed ortholog is 100%.

Group of orthologs #1695. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 G.gallus:339

F6ZRP3              	100.00%		O73775              	100.00%
                    	       		F1NWN4              	12.43%
Bootstrap support for F6ZRP3 as seed ortholog is 99%.
Bootstrap support for O73775 as seed ortholog is 100%.

Group of orthologs #1696. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 G.gallus:284

F6RRI2              	100.00%		F1NG36              	100.00%
Bootstrap support for F6RRI2 as seed ortholog is 100%.
Bootstrap support for F1NG36 as seed ortholog is 100%.

Group of orthologs #1697. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 G.gallus:433

Q1RL29              	100.00%		P26446              	100.00%
Bootstrap support for Q1RL29 as seed ortholog is 63%.
Alternative seed ortholog is F6ZQY6 (6 bits away from this cluster)
Bootstrap support for P26446 as seed ortholog is 100%.

Group of orthologs #1698. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 G.gallus:373

F6TZ34              	100.00%		F1NV15              	100.00%
                    	       		F1NLG5              	44.34%
Bootstrap support for F6TZ34 as seed ortholog is 100%.
Bootstrap support for F1NV15 as seed ortholog is 100%.

Group of orthologs #1699. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 G.gallus:431

F6XCY9              	100.00%		E1BQS8              	100.00%
Bootstrap support for F6XCY9 as seed ortholog is 100%.
Bootstrap support for E1BQS8 as seed ortholog is 100%.

Group of orthologs #1700. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 G.gallus:431

F6ZJ39              	100.00%		E1C947              	100.00%
Bootstrap support for F6ZJ39 as seed ortholog is 100%.
Bootstrap support for E1C947 as seed ortholog is 100%.

Group of orthologs #1701. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 G.gallus:431

F6XKA8              	100.00%		F1NI82              	100.00%
Bootstrap support for F6XKA8 as seed ortholog is 100%.
Bootstrap support for F1NI82 as seed ortholog is 100%.

Group of orthologs #1702. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 G.gallus:431

F6ULQ2              	100.00%		Q5ZMP3              	100.00%
Bootstrap support for F6ULQ2 as seed ortholog is 100%.
Bootstrap support for Q5ZMP3 as seed ortholog is 100%.

Group of orthologs #1703. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 G.gallus:431

H2Y3R2              	100.00%		F1NZI4              	100.00%
Bootstrap support for H2Y3R2 as seed ortholog is 100%.
Bootstrap support for F1NZI4 as seed ortholog is 100%.

Group of orthologs #1704. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 G.gallus:263

F7BL16              	100.00%		P50211              	100.00%
                    	       		E1BWH2              	35.81%
                    	       		P53410              	14.53%
Bootstrap support for F7BL16 as seed ortholog is 100%.
Bootstrap support for P50211 as seed ortholog is 100%.

Group of orthologs #1705. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 G.gallus:281

F6PI67              	100.00%		F1NEI8              	100.00%
Bootstrap support for F6PI67 as seed ortholog is 100%.
Bootstrap support for F1NEI8 as seed ortholog is 100%.

Group of orthologs #1706. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 G.gallus:430

F7BDE0              	100.00%		E1C8B5              	100.00%
Bootstrap support for F7BDE0 as seed ortholog is 100%.
Bootstrap support for E1C8B5 as seed ortholog is 100%.

Group of orthologs #1707. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 G.gallus:263

F6Q558              	100.00%		O57476              	100.00%
Bootstrap support for F6Q558 as seed ortholog is 100%.
Bootstrap support for O57476 as seed ortholog is 100%.

Group of orthologs #1708. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 G.gallus:339

F6XVD3              	100.00%		F1P1C9              	100.00%
Bootstrap support for F6XVD3 as seed ortholog is 100%.
Bootstrap support for F1P1C9 as seed ortholog is 100%.

Group of orthologs #1709. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 G.gallus:326

H2XQR8              	100.00%		E1BQM0              	100.00%
Bootstrap support for H2XQR8 as seed ortholog is 100%.
Bootstrap support for E1BQM0 as seed ortholog is 100%.

Group of orthologs #1710. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 G.gallus:429

F7BKM3              	100.00%		E1C0P2              	100.00%
Bootstrap support for F7BKM3 as seed ortholog is 100%.
Bootstrap support for E1C0P2 as seed ortholog is 100%.

Group of orthologs #1711. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:429 G.gallus:190

F6UIP2              	100.00%		F1NT10              	100.00%
Bootstrap support for F6UIP2 as seed ortholog is 100%.
Bootstrap support for F1NT10 as seed ortholog is 99%.

Group of orthologs #1712. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 G.gallus:155

F6ZPX3              	100.00%		E1C0P0              	100.00%
                    	       		E1BR32              	20.51%
Bootstrap support for F6ZPX3 as seed ortholog is 100%.
Bootstrap support for E1C0P0 as seed ortholog is 100%.

Group of orthologs #1713. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 G.gallus:56

H2Y0H5              	100.00%		Q05744              	100.00%
F6V8V5              	14.13%		
Bootstrap support for H2Y0H5 as seed ortholog is 100%.
Bootstrap support for Q05744 as seed ortholog is 94%.

Group of orthologs #1714. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 G.gallus:315

F6TBE2              	100.00%		E1C958              	100.00%
Bootstrap support for F6TBE2 as seed ortholog is 100%.
Bootstrap support for E1C958 as seed ortholog is 100%.

Group of orthologs #1715. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 G.gallus:428

F6TQT4              	100.00%		F1NSV7              	100.00%
Bootstrap support for F6TQT4 as seed ortholog is 100%.
Bootstrap support for F1NSV7 as seed ortholog is 100%.

Group of orthologs #1716. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 G.gallus:130

F6SUA6              	100.00%		P27118              	100.00%
Bootstrap support for F6SUA6 as seed ortholog is 99%.
Bootstrap support for P27118 as seed ortholog is 99%.

Group of orthologs #1717. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 G.gallus:428

H2XXZ6              	100.00%		E1C5D4              	100.00%
Bootstrap support for H2XXZ6 as seed ortholog is 100%.
Bootstrap support for E1C5D4 as seed ortholog is 100%.

Group of orthologs #1718. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 G.gallus:428

H2XY38              	100.00%		Q5ZJM3              	100.00%
Bootstrap support for H2XY38 as seed ortholog is 100%.
Bootstrap support for Q5ZJM3 as seed ortholog is 100%.

Group of orthologs #1719. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 G.gallus:427

H2Y2K2              	100.00%		F1NNM3              	100.00%
Bootstrap support for H2Y2K2 as seed ortholog is 100%.
Bootstrap support for F1NNM3 as seed ortholog is 100%.

Group of orthologs #1720. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 G.gallus:426

F6QMU4              	100.00%		F1NLH0              	100.00%
                    	       		E1C240              	66.36%
                    	       		F1N9I5              	17.45%
Bootstrap support for F6QMU4 as seed ortholog is 100%.
Bootstrap support for F1NLH0 as seed ortholog is 100%.

Group of orthologs #1721. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 G.gallus:314

F6VRW9              	100.00%		F1NN86              	100.00%
                    	       		F1P362              	29.45%
                    	       		F1NNC6              	9.73%
Bootstrap support for F6VRW9 as seed ortholog is 100%.
Bootstrap support for F1NN86 as seed ortholog is 100%.

Group of orthologs #1722. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 G.gallus:160

Q1RL25              	100.00%		F1P4C5              	100.00%
                    	       		F1NPW7              	23.77%
Bootstrap support for Q1RL25 as seed ortholog is 100%.
Bootstrap support for F1P4C5 as seed ortholog is 100%.

Group of orthologs #1723. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:426

F7ATT1              	100.00%		F1NEW1              	100.00%
Bootstrap support for F7ATT1 as seed ortholog is 100%.
Bootstrap support for F1NEW1 as seed ortholog is 100%.

Group of orthologs #1724. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 G.gallus:426

F7BDS7              	100.00%		F1NFC3              	100.00%
Bootstrap support for F7BDS7 as seed ortholog is 100%.
Bootstrap support for F1NFC3 as seed ortholog is 100%.

Group of orthologs #1725. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 G.gallus:426

F7AEV2              	100.00%		F1P1K3              	100.00%
Bootstrap support for F7AEV2 as seed ortholog is 100%.
Bootstrap support for F1P1K3 as seed ortholog is 100%.

Group of orthologs #1726. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 G.gallus:286

F6WYW5              	100.00%		Q8JG64              	100.00%
Bootstrap support for F6WYW5 as seed ortholog is 100%.
Bootstrap support for Q8JG64 as seed ortholog is 100%.

Group of orthologs #1727. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 G.gallus:425

F6VDV2              	100.00%		F1NXF0              	100.00%
                    	       		F1NI55              	62.41%
                    	       		F1NDU2              	34.88%
Bootstrap support for F6VDV2 as seed ortholog is 100%.
Bootstrap support for F1NXF0 as seed ortholog is 100%.

Group of orthologs #1728. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 G.gallus:229

F7APJ4              	100.00%		F1P0D1              	100.00%
                    	       		E1BZA2              	40.37%
Bootstrap support for F7APJ4 as seed ortholog is 100%.
Bootstrap support for F1P0D1 as seed ortholog is 100%.

Group of orthologs #1729. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 G.gallus:425

F6W350              	100.00%		E1BW96              	100.00%
Bootstrap support for F6W350 as seed ortholog is 100%.
Bootstrap support for E1BW96 as seed ortholog is 100%.

Group of orthologs #1730. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 G.gallus:425

F6VEI9              	100.00%		E1C217              	100.00%
Bootstrap support for F6VEI9 as seed ortholog is 100%.
Bootstrap support for E1C217 as seed ortholog is 100%.

Group of orthologs #1731. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 G.gallus:425

F6ZT62              	100.00%		E1BRQ9              	100.00%
Bootstrap support for F6ZT62 as seed ortholog is 100%.
Bootstrap support for E1BRQ9 as seed ortholog is 100%.

Group of orthologs #1732. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 G.gallus:425

F6UJM5              	100.00%		F1NRK2              	100.00%
Bootstrap support for F6UJM5 as seed ortholog is 100%.
Bootstrap support for F1NRK2 as seed ortholog is 100%.

Group of orthologs #1733. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 G.gallus:425

H2Y1K9              	100.00%		Q5ZI11              	100.00%
Bootstrap support for H2Y1K9 as seed ortholog is 100%.
Bootstrap support for Q5ZI11 as seed ortholog is 100%.

Group of orthologs #1734. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 G.gallus:424

F6ZGU5              	100.00%		Q5ZMJ7              	100.00%
                    	       		F1NEH4              	99.01%
Bootstrap support for F6ZGU5 as seed ortholog is 100%.
Bootstrap support for Q5ZMJ7 as seed ortholog is 100%.

Group of orthologs #1735. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 G.gallus:171

H2Y1T5              	100.00%		Q5UKY7              	100.00%
                    	       		F1NBB9              	67.04%
Bootstrap support for H2Y1T5 as seed ortholog is 100%.
Bootstrap support for Q5UKY7 as seed ortholog is 100%.

Group of orthologs #1736. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 G.gallus:424

F6Q5A8              	100.00%		F1NQ57              	100.00%
Bootstrap support for F6Q5A8 as seed ortholog is 100%.
Bootstrap support for F1NQ57 as seed ortholog is 100%.

Group of orthologs #1737. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 G.gallus:229

H2XPD1              	100.00%		E1BQR9              	100.00%
Bootstrap support for H2XPD1 as seed ortholog is 100%.
Bootstrap support for E1BQR9 as seed ortholog is 100%.

Group of orthologs #1738. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 G.gallus:424

F7BNW5              	100.00%		H9KZC8              	100.00%
Bootstrap support for F7BNW5 as seed ortholog is 100%.
Bootstrap support for H9KZC8 as seed ortholog is 100%.

Group of orthologs #1739. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 G.gallus:309

F6T9L2              	100.00%		F1P1Z2              	100.00%
                    	       		F1N8M7              	25.23%
Bootstrap support for F6T9L2 as seed ortholog is 100%.
Bootstrap support for F1P1Z2 as seed ortholog is 100%.

Group of orthologs #1740. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 G.gallus:423

Q4H3S6              	100.00%		Q5ZJV9              	100.00%
                    	       		F1NYH4              	13.50%
Bootstrap support for Q4H3S6 as seed ortholog is 100%.
Bootstrap support for Q5ZJV9 as seed ortholog is 100%.

Group of orthologs #1741. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 G.gallus:146

Q6XZ10              	100.00%		Q6XL41              	100.00%
Q6XZ09              	74.31%		
Bootstrap support for Q6XZ10 as seed ortholog is 89%.
Bootstrap support for Q6XL41 as seed ortholog is 99%.

Group of orthologs #1742. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 G.gallus:423

F6QX88              	100.00%		F1NGP3              	100.00%
Bootstrap support for F6QX88 as seed ortholog is 100%.
Bootstrap support for F1NGP3 as seed ortholog is 100%.

Group of orthologs #1743. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 G.gallus:35

F6YG66              	100.00%		E1C1D1              	100.00%
Bootstrap support for F6YG66 as seed ortholog is 99%.
Bootstrap support for E1C1D1 as seed ortholog is 47%.
Alternative seed ortholog is F1NLR0 (35 bits away from this cluster)

Group of orthologs #1744. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 G.gallus:423

F6WBA4              	100.00%		F1NKP1              	100.00%
Bootstrap support for F6WBA4 as seed ortholog is 100%.
Bootstrap support for F1NKP1 as seed ortholog is 100%.

Group of orthologs #1745. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 G.gallus:317

F7AFR6              	100.00%		F1NNE0              	100.00%
Bootstrap support for F7AFR6 as seed ortholog is 100%.
Bootstrap support for F1NNE0 as seed ortholog is 100%.

Group of orthologs #1746. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 G.gallus:71

F6TA22              	100.00%		E1C7L9              	100.00%
                    	       		Q5F468              	26.68%
                    	       		F1NYN5              	8.05%
Bootstrap support for F6TA22 as seed ortholog is 83%.
Bootstrap support for E1C7L9 as seed ortholog is 95%.

Group of orthologs #1747. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 G.gallus:422

F6UXC7              	100.00%		E1C3Q0              	100.00%
                    	       		F1NIF1              	31.56%
Bootstrap support for F6UXC7 as seed ortholog is 100%.
Bootstrap support for E1C3Q0 as seed ortholog is 100%.

Group of orthologs #1748. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 G.gallus:87

F6YRW6              	100.00%		F1NVV4              	100.00%
                    	       		E1C8N2              	7.30%
Bootstrap support for F6YRW6 as seed ortholog is 99%.
Bootstrap support for F1NVV4 as seed ortholog is 99%.

Group of orthologs #1749. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 G.gallus:70

F6VZQ1              	100.00%		E1BRR7              	100.00%
Bootstrap support for F6VZQ1 as seed ortholog is 99%.
Bootstrap support for E1BRR7 as seed ortholog is 98%.

Group of orthologs #1750. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 G.gallus:422

F6X9G1              	100.00%		E1C1B4              	100.00%
Bootstrap support for F6X9G1 as seed ortholog is 100%.
Bootstrap support for E1C1B4 as seed ortholog is 100%.

Group of orthologs #1751. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 G.gallus:421

F6U9L3              	100.00%		F1NLX8              	100.00%
                    	       		F1NWS4              	16.18%
Bootstrap support for F6U9L3 as seed ortholog is 100%.
Bootstrap support for F1NLX8 as seed ortholog is 100%.

Group of orthologs #1752. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 G.gallus:421

F6PW19              	100.00%		F1NJ27              	100.00%
Bootstrap support for F6PW19 as seed ortholog is 100%.
Bootstrap support for F1NJ27 as seed ortholog is 100%.

Group of orthologs #1753. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 G.gallus:421

F7ASH4              	100.00%		E1BVG9              	100.00%
Bootstrap support for F7ASH4 as seed ortholog is 100%.
Bootstrap support for E1BVG9 as seed ortholog is 100%.

Group of orthologs #1754. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 G.gallus:421

F6UCU4              	100.00%		F1NFM2              	100.00%
Bootstrap support for F6UCU4 as seed ortholog is 100%.
Bootstrap support for F1NFM2 as seed ortholog is 100%.

Group of orthologs #1755. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 G.gallus:421

Q7YZS7              	100.00%		F1NFI6              	100.00%
Bootstrap support for Q7YZS7 as seed ortholog is 100%.
Bootstrap support for F1NFI6 as seed ortholog is 100%.

Group of orthologs #1756. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 G.gallus:223

F7BFE1              	100.00%		E1BWK1              	100.00%
                    	       		E1BQS9              	67.60%
                    	       		F1NAA3              	10.17%
Bootstrap support for F7BFE1 as seed ortholog is 84%.
Bootstrap support for E1BWK1 as seed ortholog is 99%.

Group of orthologs #1757. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 G.gallus:420

F6X9B1              	100.00%		E1C758              	100.00%
                    	       		F1N9J9              	19.12%
Bootstrap support for F6X9B1 as seed ortholog is 100%.
Bootstrap support for E1C758 as seed ortholog is 100%.

Group of orthologs #1758. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 G.gallus:420

F7AM61              	100.00%		F1NJY1              	100.00%
                    	       		Q5ZJ06              	39.27%
Bootstrap support for F7AM61 as seed ortholog is 100%.
Bootstrap support for F1NJY1 as seed ortholog is 100%.

Group of orthologs #1759. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 G.gallus:265

F6VL41              	100.00%		E1C599              	100.00%
Bootstrap support for F6VL41 as seed ortholog is 100%.
Bootstrap support for E1C599 as seed ortholog is 100%.

Group of orthologs #1760. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:339

F6UJ45              	100.00%		F1P1X9              	100.00%
Bootstrap support for F6UJ45 as seed ortholog is 100%.
Bootstrap support for F1P1X9 as seed ortholog is 100%.

Group of orthologs #1761. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 G.gallus:420

H2XYW0              	100.00%		F1NR71              	100.00%
Bootstrap support for H2XYW0 as seed ortholog is 100%.
Bootstrap support for F1NR71 as seed ortholog is 100%.

Group of orthologs #1762. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 G.gallus:419

F6TNU2              	100.00%		F1NT21              	100.00%
Bootstrap support for F6TNU2 as seed ortholog is 100%.
Bootstrap support for F1NT21 as seed ortholog is 100%.

Group of orthologs #1763. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 G.gallus:419

F6SF69              	100.00%		F1P077              	100.00%
Bootstrap support for F6SF69 as seed ortholog is 100%.
Bootstrap support for F1P077 as seed ortholog is 100%.

Group of orthologs #1764. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 G.gallus:419

F6V8N9              	100.00%		F1NR06              	100.00%
Bootstrap support for F6V8N9 as seed ortholog is 100%.
Bootstrap support for F1NR06 as seed ortholog is 100%.

Group of orthologs #1765. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 G.gallus:159

F6Z4W7              	100.00%		F1ND63              	100.00%
Bootstrap support for F6Z4W7 as seed ortholog is 100%.
Bootstrap support for F1ND63 as seed ortholog is 99%.

Group of orthologs #1766. Best score 419 bits
Score difference with first non-orthologous sequence - C.intestinalis:419 G.gallus:419

F7AZ43              	100.00%		E1C9B9              	100.00%
Bootstrap support for F7AZ43 as seed ortholog is 100%.
Bootstrap support for E1C9B9 as seed ortholog is 100%.

Group of orthologs #1767. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 G.gallus:418

F6Q5D4              	100.00%		F1NWX1              	100.00%
Bootstrap support for F6Q5D4 as seed ortholog is 100%.
Bootstrap support for F1NWX1 as seed ortholog is 100%.

Group of orthologs #1768. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 G.gallus:418

H2Y1J2              	100.00%		E1BT98              	100.00%
Bootstrap support for H2Y1J2 as seed ortholog is 100%.
Bootstrap support for E1BT98 as seed ortholog is 100%.

Group of orthologs #1769. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 G.gallus:418

Q67EQ6              	100.00%		Q67ER3              	100.00%
Bootstrap support for Q67EQ6 as seed ortholog is 100%.
Bootstrap support for Q67ER3 as seed ortholog is 100%.

Group of orthologs #1770. Best score 417 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 G.gallus:355

F6TIU3              	100.00%		E1C6T8              	100.00%
Bootstrap support for F6TIU3 as seed ortholog is 100%.
Bootstrap support for E1C6T8 as seed ortholog is 100%.

Group of orthologs #1771. Best score 417 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 G.gallus:251

H2XR98              	100.00%		F1NI69              	100.00%
Bootstrap support for H2XR98 as seed ortholog is 100%.
Bootstrap support for F1NI69 as seed ortholog is 100%.

Group of orthologs #1772. Best score 417 bits
Score difference with first non-orthologous sequence - C.intestinalis:417 G.gallus:417

F6ZS04              	100.00%		Q5ZIH2              	100.00%
Bootstrap support for F6ZS04 as seed ortholog is 100%.
Bootstrap support for Q5ZIH2 as seed ortholog is 100%.

Group of orthologs #1773. Best score 417 bits
Score difference with first non-orthologous sequence - C.intestinalis:417 G.gallus:417

Q967X2              	100.00%		P67869              	100.00%
Bootstrap support for Q967X2 as seed ortholog is 100%.
Bootstrap support for P67869 as seed ortholog is 100%.

Group of orthologs #1774. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 G.gallus:90

H2Y2X2              	100.00%		F1P587              	100.00%
F6U649              	15.28%		E1BRS7              	9.16%
Bootstrap support for H2Y2X2 as seed ortholog is 98%.
Bootstrap support for F1P587 as seed ortholog is 93%.

Group of orthologs #1775. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 G.gallus:416

H2Y2E8              	100.00%		Q5ZKD1              	100.00%
                    	       		Q5ZHQ5              	5.17%
Bootstrap support for H2Y2E8 as seed ortholog is 100%.
Bootstrap support for Q5ZKD1 as seed ortholog is 100%.

Group of orthologs #1776. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 G.gallus:416

F6SQQ1              	100.00%		F1NGL6              	100.00%
Bootstrap support for F6SQQ1 as seed ortholog is 100%.
Bootstrap support for F1NGL6 as seed ortholog is 100%.

Group of orthologs #1777. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 G.gallus:416

F6UT38              	100.00%		F1NPB0              	100.00%
Bootstrap support for F6UT38 as seed ortholog is 100%.
Bootstrap support for F1NPB0 as seed ortholog is 100%.

Group of orthologs #1778. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 G.gallus:416

F6SHZ7              	100.00%		P14315              	100.00%
Bootstrap support for F6SHZ7 as seed ortholog is 100%.
Bootstrap support for P14315 as seed ortholog is 100%.

Group of orthologs #1779. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 G.gallus:415

F6VDW8              	100.00%		Q5ZM72              	100.00%
                    	       		E1C6H7              	43.08%
Bootstrap support for F6VDW8 as seed ortholog is 100%.
Bootstrap support for Q5ZM72 as seed ortholog is 100%.

Group of orthologs #1780. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 G.gallus:415

F6VTZ3              	100.00%		E1C0S7              	100.00%
Bootstrap support for F6VTZ3 as seed ortholog is 100%.
Bootstrap support for E1C0S7 as seed ortholog is 100%.

Group of orthologs #1781. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 G.gallus:415

F6ZPY0              	100.00%		E1BR04              	100.00%
Bootstrap support for F6ZPY0 as seed ortholog is 100%.
Bootstrap support for E1BR04 as seed ortholog is 100%.

Group of orthologs #1782. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 G.gallus:415

F6TE09              	100.00%		F1NFG4              	100.00%
Bootstrap support for F6TE09 as seed ortholog is 100%.
Bootstrap support for F1NFG4 as seed ortholog is 100%.

Group of orthologs #1783. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 G.gallus:415

F7BE59              	100.00%		E1BRZ7              	100.00%
Bootstrap support for F7BE59 as seed ortholog is 100%.
Bootstrap support for E1BRZ7 as seed ortholog is 100%.

Group of orthologs #1784. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 G.gallus:415

F6Y3X0              	100.00%		F1NIF7              	100.00%
Bootstrap support for F6Y3X0 as seed ortholog is 100%.
Bootstrap support for F1NIF7 as seed ortholog is 100%.

Group of orthologs #1785. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 G.gallus:130

F6UUI8              	100.00%		F1P0L5              	100.00%
Bootstrap support for F6UUI8 as seed ortholog is 100%.
Bootstrap support for F1P0L5 as seed ortholog is 99%.

Group of orthologs #1786. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 G.gallus:415

F6U9X5              	100.00%		P32429              	100.00%
Bootstrap support for F6U9X5 as seed ortholog is 100%.
Bootstrap support for P32429 as seed ortholog is 100%.

Group of orthologs #1787. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 G.gallus:414

F6ZCL3              	100.00%		Q5F398              	100.00%
                    	       		F1NH42              	23.22%
Bootstrap support for F6ZCL3 as seed ortholog is 100%.
Bootstrap support for Q5F398 as seed ortholog is 100%.

Group of orthologs #1788. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 G.gallus:414

F6V6F4              	100.00%		E1BXS9              	100.00%
Bootstrap support for F6V6F4 as seed ortholog is 100%.
Bootstrap support for E1BXS9 as seed ortholog is 100%.

Group of orthologs #1789. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 G.gallus:414

F6R3M6              	100.00%		F1NQN1              	100.00%
Bootstrap support for F6R3M6 as seed ortholog is 100%.
Bootstrap support for F1NQN1 as seed ortholog is 100%.

Group of orthologs #1790. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:414

F6Y403              	100.00%		F1NIN2              	100.00%
Bootstrap support for F6Y403 as seed ortholog is 92%.
Bootstrap support for F1NIN2 as seed ortholog is 100%.

Group of orthologs #1791. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 G.gallus:147

F6UK82              	100.00%		F1NYG2              	100.00%
Bootstrap support for F6UK82 as seed ortholog is 100%.
Bootstrap support for F1NYG2 as seed ortholog is 99%.

Group of orthologs #1792. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 G.gallus:114

F6TEZ1              	100.00%		Q5ZJI7              	100.00%
Bootstrap support for F6TEZ1 as seed ortholog is 100%.
Bootstrap support for Q5ZJI7 as seed ortholog is 99%.

Group of orthologs #1793. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 G.gallus:414

F7APS6              	100.00%		F1NY99              	100.00%
Bootstrap support for F7APS6 as seed ortholog is 100%.
Bootstrap support for F1NY99 as seed ortholog is 100%.

Group of orthologs #1794. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 G.gallus:414

F6VWH1              	100.00%		Q5NDL3              	100.00%
Bootstrap support for F6VWH1 as seed ortholog is 59%.
Alternative seed ortholog is F7AK22 (11 bits away from this cluster)
Bootstrap support for Q5NDL3 as seed ortholog is 100%.

Group of orthologs #1795. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 G.gallus:414

F6Y0T9              	100.00%		Q5ZJL9              	100.00%
Bootstrap support for F6Y0T9 as seed ortholog is 100%.
Bootstrap support for Q5ZJL9 as seed ortholog is 100%.

Group of orthologs #1796. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 G.gallus:414

F7B2R9              	100.00%		Q5ZJ66              	100.00%
Bootstrap support for F7B2R9 as seed ortholog is 100%.
Bootstrap support for Q5ZJ66 as seed ortholog is 100%.

Group of orthologs #1797. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 G.gallus:189

F6TXZ8              	100.00%		E1C891              	100.00%
                    	       		F1P5V9              	26.33%
Bootstrap support for F6TXZ8 as seed ortholog is 100%.
Bootstrap support for E1C891 as seed ortholog is 100%.

Group of orthologs #1798. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 G.gallus:297

F6VQ38              	100.00%		F1NVP3              	100.00%
Bootstrap support for F6VQ38 as seed ortholog is 100%.
Bootstrap support for F1NVP3 as seed ortholog is 100%.

Group of orthologs #1799. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 G.gallus:413

F6YLE1              	100.00%		F1NSG9              	100.00%
Bootstrap support for F6YLE1 as seed ortholog is 100%.
Bootstrap support for F1NSG9 as seed ortholog is 100%.

Group of orthologs #1800. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 G.gallus:413

H2XPN9              	100.00%		F1NCB5              	100.00%
Bootstrap support for H2XPN9 as seed ortholog is 100%.
Bootstrap support for F1NCB5 as seed ortholog is 100%.

Group of orthologs #1801. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 G.gallus:413

F6SSM8              	100.00%		Q5ZII1              	100.00%
Bootstrap support for F6SSM8 as seed ortholog is 100%.
Bootstrap support for Q5ZII1 as seed ortholog is 100%.

Group of orthologs #1802. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 G.gallus:260

F6ZVH3              	100.00%		E1C292              	100.00%
                    	       		E1C312              	44.10%
Bootstrap support for F6ZVH3 as seed ortholog is 100%.
Bootstrap support for E1C292 as seed ortholog is 99%.

Group of orthologs #1803. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:233

F7A0P0              	100.00%		E1BVE1              	100.00%
Bootstrap support for F7A0P0 as seed ortholog is 100%.
Bootstrap support for E1BVE1 as seed ortholog is 100%.

Group of orthologs #1804. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:412

F6TBW4              	100.00%		F1NLI6              	100.00%
Bootstrap support for F6TBW4 as seed ortholog is 99%.
Bootstrap support for F1NLI6 as seed ortholog is 100%.

Group of orthologs #1805. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 G.gallus:235

F6X9L5              	100.00%		F1P5Q3              	100.00%
Bootstrap support for F6X9L5 as seed ortholog is 100%.
Bootstrap support for F1P5Q3 as seed ortholog is 100%.

Group of orthologs #1806. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 G.gallus:412

H2Y3F6              	100.00%		F1NNP4              	100.00%
Bootstrap support for H2Y3F6 as seed ortholog is 100%.
Bootstrap support for F1NNP4 as seed ortholog is 100%.

Group of orthologs #1807. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 G.gallus:94

F6YSP8              	100.00%		E1BT19              	100.00%
Bootstrap support for F6YSP8 as seed ortholog is 77%.
Bootstrap support for E1BT19 as seed ortholog is 98%.

Group of orthologs #1808. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 G.gallus:106

F7A8J9              	100.00%		F1NBW3              	100.00%
Bootstrap support for F7A8J9 as seed ortholog is 100%.
Bootstrap support for F1NBW3 as seed ortholog is 99%.

Group of orthologs #1809. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 G.gallus:199

H2Y395              	100.00%		Q5ZK92              	100.00%
Bootstrap support for H2Y395 as seed ortholog is 100%.
Bootstrap support for Q5ZK92 as seed ortholog is 99%.

Group of orthologs #1810. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 G.gallus:410

F6PR01              	100.00%		F1NIW3              	100.00%
                    	       		E1BWI2              	35.91%
                    	       		H9L077              	33.09%
Bootstrap support for F6PR01 as seed ortholog is 100%.
Bootstrap support for F1NIW3 as seed ortholog is 100%.

Group of orthologs #1811. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 G.gallus:410

F6T7E5              	100.00%		F1NYM5              	100.00%
                    	       		F1NNH8              	36.73%
                    	       		F1NGI3              	6.00%
Bootstrap support for F6T7E5 as seed ortholog is 100%.
Bootstrap support for F1NYM5 as seed ortholog is 100%.

Group of orthologs #1812. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 G.gallus:336

F6XG01              	100.00%		E1C584              	100.00%
                    	       		E1C764              	22.79%
Bootstrap support for F6XG01 as seed ortholog is 100%.
Bootstrap support for E1C584 as seed ortholog is 100%.

Group of orthologs #1813. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 G.gallus:410

F6SH39              	100.00%		O42349              	100.00%
                    	       		F1NUP3              	29.14%
Bootstrap support for F6SH39 as seed ortholog is 100%.
Bootstrap support for O42349 as seed ortholog is 100%.

Group of orthologs #1814. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 G.gallus:205

F6PJM3              	100.00%		F1NCJ9              	100.00%
Bootstrap support for F6PJM3 as seed ortholog is 100%.
Bootstrap support for F1NCJ9 as seed ortholog is 99%.

Group of orthologs #1815. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 G.gallus:349

F6UAP7              	100.00%		F1NPY6              	100.00%
Bootstrap support for F6UAP7 as seed ortholog is 100%.
Bootstrap support for F1NPY6 as seed ortholog is 100%.

Group of orthologs #1816. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 G.gallus:410

H2XNB1              	100.00%		F1N8A1              	100.00%
Bootstrap support for H2XNB1 as seed ortholog is 100%.
Bootstrap support for F1N8A1 as seed ortholog is 100%.

Group of orthologs #1817. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 G.gallus:410

H2XPZ1              	100.00%		F1ND12              	100.00%
Bootstrap support for H2XPZ1 as seed ortholog is 100%.
Bootstrap support for F1ND12 as seed ortholog is 100%.

Group of orthologs #1818. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:108

F6PN33              	100.00%		F1NZY8              	100.00%
                    	       		E1C6Q5              	38.86%
                    	       		Q8JH64              	34.41%
                    	       		E1C035              	25.28%
                    	       		E1BTT3              	20.27%
Bootstrap support for F6PN33 as seed ortholog is 97%.
Bootstrap support for F1NZY8 as seed ortholog is 99%.

Group of orthologs #1819. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 G.gallus:409

F6ZVC8              	100.00%		E1C129              	100.00%
Bootstrap support for F6ZVC8 as seed ortholog is 100%.
Bootstrap support for E1C129 as seed ortholog is 100%.

Group of orthologs #1820. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 G.gallus:409

H2XZN3              	100.00%		E1BY03              	100.00%
Bootstrap support for H2XZN3 as seed ortholog is 100%.
Bootstrap support for E1BY03 as seed ortholog is 100%.

Group of orthologs #1821. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 G.gallus:409

F6SGF7              	100.00%		Q5ZJJ8              	100.00%
Bootstrap support for F6SGF7 as seed ortholog is 100%.
Bootstrap support for Q5ZJJ8 as seed ortholog is 100%.

Group of orthologs #1822. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 G.gallus:409

F7ATS3              	100.00%		Q5ZJN0              	100.00%
Bootstrap support for F7ATS3 as seed ortholog is 100%.
Bootstrap support for Q5ZJN0 as seed ortholog is 100%.

Group of orthologs #1823. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 G.gallus:409

F7BDS3              	100.00%		Q5ZMK3              	100.00%
Bootstrap support for F7BDS3 as seed ortholog is 100%.
Bootstrap support for Q5ZMK3 as seed ortholog is 100%.

Group of orthologs #1824. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 G.gallus:408

F6XEX3              	100.00%		F1NA41              	100.00%
F6XEW4              	14.96%		F1NX35              	44.43%
                    	       		E1C333              	28.31%
Bootstrap support for F6XEX3 as seed ortholog is 100%.
Bootstrap support for F1NA41 as seed ortholog is 100%.

Group of orthologs #1825. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 G.gallus:408

F6VII3              	100.00%		E1BXA0              	100.00%
Bootstrap support for F6VII3 as seed ortholog is 100%.
Bootstrap support for E1BXA0 as seed ortholog is 100%.

Group of orthologs #1826. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 G.gallus:408

F6Z7S0              	100.00%		F1NN39              	100.00%
Bootstrap support for F6Z7S0 as seed ortholog is 100%.
Bootstrap support for F1NN39 as seed ortholog is 100%.

Group of orthologs #1827. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 G.gallus:408

F6XDT3              	100.00%		Q5ZMK9              	100.00%
Bootstrap support for F6XDT3 as seed ortholog is 100%.
Bootstrap support for Q5ZMK9 as seed ortholog is 100%.

Group of orthologs #1828. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 G.gallus:407

F6X034              	100.00%		F1NJT7              	100.00%
                    	       		Q5ZKA5              	24.46%
Bootstrap support for F6X034 as seed ortholog is 100%.
Bootstrap support for F1NJT7 as seed ortholog is 100%.

Group of orthologs #1829. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 G.gallus:407

F7BHN6              	100.00%		F1NM59              	100.00%
                    	       		E1BQE4              	30.94%
Bootstrap support for F7BHN6 as seed ortholog is 100%.
Bootstrap support for F1NM59 as seed ortholog is 100%.

Group of orthologs #1830. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 G.gallus:290

F6WTG3              	100.00%		F1NXF6              	100.00%
                    	       		F1NYP4              	28.08%
Bootstrap support for F6WTG3 as seed ortholog is 100%.
Bootstrap support for F1NXF6 as seed ortholog is 100%.

Group of orthologs #1831. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 G.gallus:406

F6YW80              	100.00%		F1NX62              	100.00%
                    	       		E1C8P3              	31.38%
Bootstrap support for F6YW80 as seed ortholog is 100%.
Bootstrap support for F1NX62 as seed ortholog is 100%.

Group of orthologs #1832. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 G.gallus:44

H2XQX1              	100.00%		P52731              	100.00%
                    	       		F1NA42              	55.41%
Bootstrap support for H2XQX1 as seed ortholog is 100%.
Bootstrap support for P52731 as seed ortholog is 77%.

Group of orthologs #1833. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 G.gallus:406

F6QQ49              	100.00%		F1NBL6              	100.00%
Bootstrap support for F6QQ49 as seed ortholog is 100%.
Bootstrap support for F1NBL6 as seed ortholog is 100%.

Group of orthologs #1834. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 G.gallus:406

F6WHI9              	100.00%		F1NLI7              	100.00%
Bootstrap support for F6WHI9 as seed ortholog is 100%.
Bootstrap support for F1NLI7 as seed ortholog is 100%.

Group of orthologs #1835. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 G.gallus:406

F7B503              	100.00%		E1C8I5              	100.00%
Bootstrap support for F7B503 as seed ortholog is 100%.
Bootstrap support for E1C8I5 as seed ortholog is 100%.

Group of orthologs #1836. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 G.gallus:133

F6X159              	100.00%		F1NMX4              	100.00%
Bootstrap support for F6X159 as seed ortholog is 99%.
Bootstrap support for F1NMX4 as seed ortholog is 99%.

Group of orthologs #1837. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 G.gallus:405

F6TGX7              	100.00%		E1C1Y0              	100.00%
Bootstrap support for F6TGX7 as seed ortholog is 100%.
Bootstrap support for E1C1Y0 as seed ortholog is 100%.

Group of orthologs #1838. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 G.gallus:405

F6SCV9              	100.00%		F1NJZ4              	100.00%
Bootstrap support for F6SCV9 as seed ortholog is 100%.
Bootstrap support for F1NJZ4 as seed ortholog is 100%.

Group of orthologs #1839. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 G.gallus:405

F7B623              	100.00%		E1BW58              	100.00%
Bootstrap support for F7B623 as seed ortholog is 100%.
Bootstrap support for E1BW58 as seed ortholog is 100%.

Group of orthologs #1840. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 G.gallus:405

F6WU83              	100.00%		F1NM27              	100.00%
Bootstrap support for F6WU83 as seed ortholog is 100%.
Bootstrap support for F1NM27 as seed ortholog is 100%.

Group of orthologs #1841. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 G.gallus:405

F6YDG1              	100.00%		F1NLT0              	100.00%
Bootstrap support for F6YDG1 as seed ortholog is 100%.
Bootstrap support for F1NLT0 as seed ortholog is 100%.

Group of orthologs #1842. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 G.gallus:269

F6VFZ2              	100.00%		E1BVM8              	100.00%
                    	       		F1NM90              	41.15%
Bootstrap support for F6VFZ2 as seed ortholog is 100%.
Bootstrap support for E1BVM8 as seed ortholog is 100%.

Group of orthologs #1843. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 G.gallus:404

F6Z1E3              	100.00%		F2Z4K7              	100.00%
Bootstrap support for F6Z1E3 as seed ortholog is 100%.
Bootstrap support for F2Z4K7 as seed ortholog is 100%.

Group of orthologs #1844. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 G.gallus:122

F6Y836              	100.00%		Q8JHU1              	100.00%
Bootstrap support for F6Y836 as seed ortholog is 100%.
Bootstrap support for Q8JHU1 as seed ortholog is 99%.

Group of orthologs #1845. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 G.gallus:404

H2XZE3              	100.00%		F1NKU9              	100.00%
Bootstrap support for H2XZE3 as seed ortholog is 100%.
Bootstrap support for F1NKU9 as seed ortholog is 100%.

Group of orthologs #1846. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 G.gallus:404

Q8HIN5              	100.00%		P18946              	100.00%
Bootstrap support for Q8HIN5 as seed ortholog is 100%.
Bootstrap support for P18946 as seed ortholog is 100%.

Group of orthologs #1847. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 G.gallus:403

F6WCD3              	100.00%		E1BVG7              	100.00%
Bootstrap support for F6WCD3 as seed ortholog is 100%.
Bootstrap support for E1BVG7 as seed ortholog is 100%.

Group of orthologs #1848. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 G.gallus:403

F7B4P3              	100.00%		F1NJT9              	100.00%
Bootstrap support for F7B4P3 as seed ortholog is 100%.
Bootstrap support for F1NJT9 as seed ortholog is 100%.

Group of orthologs #1849. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 G.gallus:191

Q8T883              	100.00%		E1C1A3              	100.00%
Bootstrap support for Q8T883 as seed ortholog is 100%.
Bootstrap support for E1C1A3 as seed ortholog is 100%.

Group of orthologs #1850. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 G.gallus:333

F7ASN6              	100.00%		F1NYB5              	100.00%
Bootstrap support for F7ASN6 as seed ortholog is 100%.
Bootstrap support for F1NYB5 as seed ortholog is 100%.

Group of orthologs #1851. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 G.gallus:403

F6ZYR4              	100.00%		H9L125              	100.00%
Bootstrap support for F6ZYR4 as seed ortholog is 100%.
Bootstrap support for H9L125 as seed ortholog is 100%.

Group of orthologs #1852. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 G.gallus:403

F7B4X6              	100.00%		Q5ZIK9              	100.00%
Bootstrap support for F7B4X6 as seed ortholog is 100%.
Bootstrap support for Q5ZIK9 as seed ortholog is 100%.

Group of orthologs #1853. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 G.gallus:113

F6YG13              	100.00%		E1C890              	100.00%
                    	       		Q90845              	31.27%
                    	       		F1NAX6              	20.14%
                    	       		E1BW42              	18.31%
                    	       		F1NXA6              	17.61%
                    	       		P19150              	11.69%
Bootstrap support for F6YG13 as seed ortholog is 99%.
Bootstrap support for E1C890 as seed ortholog is 94%.

Group of orthologs #1854. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:402 G.gallus:402

F6Q0S7              	100.00%		E1C9E6              	100.00%
Bootstrap support for F6Q0S7 as seed ortholog is 100%.
Bootstrap support for E1C9E6 as seed ortholog is 100%.

Group of orthologs #1855. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:229

F6XBY1              	100.00%		E1BW06              	100.00%
Bootstrap support for F6XBY1 as seed ortholog is 100%.
Bootstrap support for E1BW06 as seed ortholog is 100%.

Group of orthologs #1856. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 G.gallus:226

F6TZR8              	100.00%		P47191              	100.00%
Bootstrap support for F6TZR8 as seed ortholog is 99%.
Bootstrap support for P47191 as seed ortholog is 100%.

Group of orthologs #1857. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:402 G.gallus:402

F6ZX12              	100.00%		Q9YHT2              	100.00%
Bootstrap support for F6ZX12 as seed ortholog is 100%.
Bootstrap support for Q9YHT2 as seed ortholog is 100%.

Group of orthologs #1858. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 G.gallus:401

F6Y5N8              	100.00%		E1C1E7              	100.00%
Bootstrap support for F6Y5N8 as seed ortholog is 100%.
Bootstrap support for E1C1E7 as seed ortholog is 100%.

Group of orthologs #1859. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 G.gallus:210

F6Z8S6              	100.00%		E1C6U8              	100.00%
Bootstrap support for F6Z8S6 as seed ortholog is 100%.
Bootstrap support for E1C6U8 as seed ortholog is 100%.

Group of orthologs #1860. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 G.gallus:319

F6ZP02              	100.00%		E1C6A8              	100.00%
Bootstrap support for F6ZP02 as seed ortholog is 100%.
Bootstrap support for E1C6A8 as seed ortholog is 100%.

Group of orthologs #1861. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 G.gallus:150

H2XPE2              	100.00%		E1BXD3              	100.00%
Bootstrap support for H2XPE2 as seed ortholog is 100%.
Bootstrap support for E1BXD3 as seed ortholog is 99%.

Group of orthologs #1862. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 G.gallus:401

F6Q9M9              	100.00%		Q5F3W4              	100.00%
Bootstrap support for F6Q9M9 as seed ortholog is 100%.
Bootstrap support for Q5F3W4 as seed ortholog is 100%.

Group of orthologs #1863. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 G.gallus:400

F6Q041              	100.00%		Q5ZI39              	100.00%
                    	       		Q5ZLW0              	70.01%
                    	       		P19179              	64.59%
Bootstrap support for F6Q041 as seed ortholog is 100%.
Bootstrap support for Q5ZI39 as seed ortholog is 100%.

Group of orthologs #1864. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 G.gallus:400

F6VH85              	100.00%		O13154              	100.00%
                    	       		E1C4P4              	51.35%
                    	       		Q1G1I6              	20.58%
Bootstrap support for F6VH85 as seed ortholog is 100%.
Bootstrap support for O13154 as seed ortholog is 100%.

Group of orthologs #1865. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 G.gallus:400

F7AI88              	100.00%		F1NF19              	100.00%
                    	       		E1BR98              	34.28%
Bootstrap support for F7AI88 as seed ortholog is 100%.
Bootstrap support for F1NF19 as seed ortholog is 100%.

Group of orthologs #1866. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 G.gallus:400

F6UMM5              	100.00%		P84169              	100.00%
                    	       		E1C2R6              	32.57%
Bootstrap support for F6UMM5 as seed ortholog is 100%.
Bootstrap support for P84169 as seed ortholog is 100%.

Group of orthologs #1867. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 G.gallus:400

F6PV66              	100.00%		E1C7W8              	100.00%
Bootstrap support for F6PV66 as seed ortholog is 100%.
Bootstrap support for E1C7W8 as seed ortholog is 100%.

Group of orthologs #1868. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 G.gallus:400

F6WVX7              	100.00%		F1NVQ2              	100.00%
Bootstrap support for F6WVX7 as seed ortholog is 100%.
Bootstrap support for F1NVQ2 as seed ortholog is 100%.

Group of orthologs #1869. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 G.gallus:400

F6S360              	100.00%		Q5ZJ60              	100.00%
Bootstrap support for F6S360 as seed ortholog is 100%.
Bootstrap support for Q5ZJ60 as seed ortholog is 100%.

Group of orthologs #1870. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 G.gallus:400

Q1RL49              	100.00%		F1NEG7              	100.00%
Bootstrap support for Q1RL49 as seed ortholog is 100%.
Bootstrap support for F1NEG7 as seed ortholog is 100%.

Group of orthologs #1871. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 G.gallus:138

F6YSL9              	100.00%		Q90YH9              	100.00%
Bootstrap support for F6YSL9 as seed ortholog is 100%.
Bootstrap support for Q90YH9 as seed ortholog is 99%.

Group of orthologs #1872. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 G.gallus:400

H2XYQ2              	100.00%		F1NQP8              	100.00%
Bootstrap support for H2XYQ2 as seed ortholog is 100%.
Bootstrap support for F1NQP8 as seed ortholog is 100%.

Group of orthologs #1873. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 G.gallus:347

F6VPX3              	100.00%		E1BZP8              	100.00%
                    	       		Q5ZLL8              	40.61%
Bootstrap support for F6VPX3 as seed ortholog is 100%.
Bootstrap support for E1BZP8 as seed ortholog is 100%.

Group of orthologs #1874. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 G.gallus:241

F6YBW0              	100.00%		E1BWR7              	100.00%
                    	       		F1NKV0              	27.99%
Bootstrap support for F6YBW0 as seed ortholog is 100%.
Bootstrap support for E1BWR7 as seed ortholog is 99%.

Group of orthologs #1875. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 G.gallus:399

H2XSN3              	100.00%		E1BU09              	100.00%
                    	       		P35915              	22.03%
Bootstrap support for H2XSN3 as seed ortholog is 100%.
Bootstrap support for E1BU09 as seed ortholog is 100%.

Group of orthologs #1876. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 G.gallus:399

F6RRX9              	100.00%		F1P5G1              	100.00%
Bootstrap support for F6RRX9 as seed ortholog is 100%.
Bootstrap support for F1P5G1 as seed ortholog is 100%.

Group of orthologs #1877. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 G.gallus:399

F6WK69              	100.00%		Q5ZMV9              	100.00%
Bootstrap support for F6WK69 as seed ortholog is 100%.
Bootstrap support for Q5ZMV9 as seed ortholog is 100%.

Group of orthologs #1878. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 G.gallus:398

F6UAH7              	100.00%		F1NX58              	100.00%
                    	       		F1NWX9              	21.76%
Bootstrap support for F6UAH7 as seed ortholog is 100%.
Bootstrap support for F1NX58 as seed ortholog is 100%.

Group of orthologs #1879. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 G.gallus:398

F6U6L5              	100.00%		E1BZH9              	100.00%
Bootstrap support for F6U6L5 as seed ortholog is 100%.
Bootstrap support for E1BZH9 as seed ortholog is 100%.

Group of orthologs #1880. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 G.gallus:398

F6QB35              	100.00%		F1N958              	100.00%
Bootstrap support for F6QB35 as seed ortholog is 100%.
Bootstrap support for F1N958 as seed ortholog is 100%.

Group of orthologs #1881. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 G.gallus:348

F6QQM7              	100.00%		F1NGX8              	100.00%
Bootstrap support for F6QQM7 as seed ortholog is 100%.
Bootstrap support for F1NGX8 as seed ortholog is 100%.

Group of orthologs #1882. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 G.gallus:398

F6QCQ5              	100.00%		F1NK46              	100.00%
Bootstrap support for F6QCQ5 as seed ortholog is 100%.
Bootstrap support for F1NK46 as seed ortholog is 100%.

Group of orthologs #1883. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 G.gallus:398

F6RF92              	100.00%		F1NW67              	100.00%
Bootstrap support for F6RF92 as seed ortholog is 99%.
Bootstrap support for F1NW67 as seed ortholog is 100%.

Group of orthologs #1884. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 G.gallus:398

F6R589              	100.00%		Q9DEA3              	100.00%
Bootstrap support for F6R589 as seed ortholog is 100%.
Bootstrap support for Q9DEA3 as seed ortholog is 100%.

Group of orthologs #1885. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 G.gallus:94

F6QHN7              	100.00%		F1NHE9              	100.00%
                    	       		O42229              	49.79%
                    	       		P52186              	49.58%
                    	       		F1NI76              	41.14%
Bootstrap support for F6QHN7 as seed ortholog is 100%.
Bootstrap support for F1NHE9 as seed ortholog is 99%.

Group of orthologs #1886. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 G.gallus:397

F6TXT5              	100.00%		F1N9X5              	100.00%
Bootstrap support for F6TXT5 as seed ortholog is 100%.
Bootstrap support for F1N9X5 as seed ortholog is 100%.

Group of orthologs #1887. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 G.gallus:64

F6TVB5              	100.00%		F1NF83              	100.00%
Bootstrap support for F6TVB5 as seed ortholog is 100%.
Bootstrap support for F1NF83 as seed ortholog is 98%.

Group of orthologs #1888. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 G.gallus:397

F6WZ68              	100.00%		E1C8C8              	100.00%
Bootstrap support for F6WZ68 as seed ortholog is 100%.
Bootstrap support for E1C8C8 as seed ortholog is 100%.

Group of orthologs #1889. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 G.gallus:313

F6VBG8              	100.00%		F1NLA0              	100.00%
Bootstrap support for F6VBG8 as seed ortholog is 100%.
Bootstrap support for F1NLA0 as seed ortholog is 100%.

Group of orthologs #1890. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 G.gallus:397

F6SF30              	100.00%		Q5ZIW2              	100.00%
Bootstrap support for F6SF30 as seed ortholog is 100%.
Bootstrap support for Q5ZIW2 as seed ortholog is 100%.

Group of orthologs #1891. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 G.gallus:354

F6VQ02              	100.00%		Q5ZL33              	100.00%
Bootstrap support for F6VQ02 as seed ortholog is 100%.
Bootstrap support for Q5ZL33 as seed ortholog is 100%.

Group of orthologs #1892. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 G.gallus:170

F6XSE6              	100.00%		E1BUE5              	100.00%
                    	       		E1C8F2              	40.26%
                    	       		F1NWG3              	20.42%
                    	       		F1NBM1              	19.70%
Bootstrap support for F6XSE6 as seed ortholog is 74%.
Alternative seed ortholog is F6RPN1 (42 bits away from this cluster)
Bootstrap support for E1BUE5 as seed ortholog is 99%.

Group of orthologs #1893. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 G.gallus:396

F6SFM0              	100.00%		E1BX18              	100.00%
                    	       		E1C6U6              	14.71%
Bootstrap support for F6SFM0 as seed ortholog is 100%.
Bootstrap support for E1BX18 as seed ortholog is 100%.

Group of orthologs #1894. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 G.gallus:286

H2XZF9              	100.00%		E1BXX4              	100.00%
                    	       		F1NXT8              	31.35%
Bootstrap support for H2XZF9 as seed ortholog is 100%.
Bootstrap support for E1BXX4 as seed ortholog is 100%.

Group of orthologs #1895. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 G.gallus:396

F6V899              	100.00%		Q5ZIR1              	100.00%
                    	       		Q5ZJ81              	31.03%
Bootstrap support for F6V899 as seed ortholog is 100%.
Bootstrap support for Q5ZIR1 as seed ortholog is 100%.

Group of orthologs #1896. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 G.gallus:396

F6Y7Q5              	100.00%		Q9PU40              	100.00%
                    	       		F1NVQ3              	31.16%
Bootstrap support for F6Y7Q5 as seed ortholog is 100%.
Bootstrap support for Q9PU40 as seed ortholog is 100%.

Group of orthologs #1897. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 G.gallus:287

F6PR16              	100.00%		E1BRX4              	100.00%
Bootstrap support for F6PR16 as seed ortholog is 100%.
Bootstrap support for E1BRX4 as seed ortholog is 100%.

Group of orthologs #1898. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 G.gallus:396

F6RMR3              	100.00%		E1BWV9              	100.00%
Bootstrap support for F6RMR3 as seed ortholog is 100%.
Bootstrap support for E1BWV9 as seed ortholog is 100%.

Group of orthologs #1899. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 G.gallus:176

F6SWB6              	100.00%		F1NWB4              	100.00%
Bootstrap support for F6SWB6 as seed ortholog is 100%.
Bootstrap support for F1NWB4 as seed ortholog is 99%.

Group of orthologs #1900. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 G.gallus:396

H2XLW7              	100.00%		E1C1R5              	100.00%
Bootstrap support for H2XLW7 as seed ortholog is 100%.
Bootstrap support for E1C1R5 as seed ortholog is 100%.

Group of orthologs #1901. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 G.gallus:396

F6YAD0              	100.00%		F1NTL3              	100.00%
Bootstrap support for F6YAD0 as seed ortholog is 100%.
Bootstrap support for F1NTL3 as seed ortholog is 100%.

Group of orthologs #1902. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 G.gallus:52

Q8I7E2              	100.00%		Q5ZKX9              	100.00%
Bootstrap support for Q8I7E2 as seed ortholog is 100%.
Bootstrap support for Q5ZKX9 as seed ortholog is 99%.

Group of orthologs #1903. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 G.gallus:395

F6W3Q3              	100.00%		F1NG15              	100.00%
                    	       		F1NK39              	17.61%
Bootstrap support for F6W3Q3 as seed ortholog is 100%.
Bootstrap support for F1NG15 as seed ortholog is 100%.

Group of orthologs #1904. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 G.gallus:152

F7BAT7              	100.00%		G1K2Y6              	100.00%
                    	       		P84173              	100.00%
Bootstrap support for F7BAT7 as seed ortholog is 100%.
Bootstrap support for G1K2Y6 as seed ortholog is 100%.
Bootstrap support for P84173 as seed ortholog is 100%.

Group of orthologs #1905. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 G.gallus:218

F6XTZ0              	100.00%		F1NY46              	100.00%
Bootstrap support for F6XTZ0 as seed ortholog is 100%.
Bootstrap support for F1NY46 as seed ortholog is 99%.

Group of orthologs #1906. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 G.gallus:395

F7ACG4              	100.00%		Q5ZKA6              	100.00%
Bootstrap support for F7ACG4 as seed ortholog is 100%.
Bootstrap support for Q5ZKA6 as seed ortholog is 100%.

Group of orthologs #1907. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 G.gallus:230

Q1RLH6              	100.00%		E1C2V1              	100.00%
                    	       		E1BU97              	14.92%
                    	       		F1NLU1              	11.59%
Bootstrap support for Q1RLH6 as seed ortholog is 100%.
Bootstrap support for E1C2V1 as seed ortholog is 100%.

Group of orthologs #1908. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 G.gallus:120

Q9U6V0              	100.00%		F1NX78              	100.00%
                    	       		F1NMK6              	55.96%
Bootstrap support for Q9U6V0 as seed ortholog is 99%.
Bootstrap support for F1NX78 as seed ortholog is 99%.

Group of orthologs #1909. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 G.gallus:394

H2XLX2              	100.00%		E1BSU4              	100.00%
Bootstrap support for H2XLX2 as seed ortholog is 100%.
Bootstrap support for E1BSU4 as seed ortholog is 100%.

Group of orthologs #1910. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 G.gallus:394

F6Q8G4              	100.00%		F1NWU5              	100.00%
Bootstrap support for F6Q8G4 as seed ortholog is 100%.
Bootstrap support for F1NWU5 as seed ortholog is 100%.

Group of orthologs #1911. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 G.gallus:394

F6YIR3              	100.00%		F1N863              	100.00%
Bootstrap support for F6YIR3 as seed ortholog is 100%.
Bootstrap support for F1N863 as seed ortholog is 100%.

Group of orthologs #1912. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 G.gallus:394

H2XST8              	100.00%		E1BZA0              	100.00%
Bootstrap support for H2XST8 as seed ortholog is 100%.
Bootstrap support for E1BZA0 as seed ortholog is 100%.

Group of orthologs #1913. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 G.gallus:394

F6YY79              	100.00%		F1NUJ0              	100.00%
Bootstrap support for F6YY79 as seed ortholog is 100%.
Bootstrap support for F1NUJ0 as seed ortholog is 100%.

Group of orthologs #1914. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 G.gallus:394

F6TLP7              	100.00%		Q5ZKT1              	100.00%
Bootstrap support for F6TLP7 as seed ortholog is 100%.
Bootstrap support for Q5ZKT1 as seed ortholog is 100%.

Group of orthologs #1915. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 G.gallus:85

F6XQI0              	100.00%		F1P3M0              	100.00%
                    	       		F1P0S0              	42.36%
                    	       		Q90854              	12.01%
                    	       		F1NH48              	11.35%
                    	       		F1NHK1              	8.30%
Bootstrap support for F6XQI0 as seed ortholog is 100%.
Bootstrap support for F1P3M0 as seed ortholog is 99%.

Group of orthologs #1916. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 G.gallus:393

F6YFP0              	100.00%		F1NLP2              	100.00%
                    	       		Q5ZLT2              	46.79%
                    	       		F1NYN2              	24.31%
Bootstrap support for F6YFP0 as seed ortholog is 100%.
Bootstrap support for F1NLP2 as seed ortholog is 100%.

Group of orthologs #1917. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 G.gallus:118

F6PT55              	100.00%		E1C234              	100.00%
Bootstrap support for F6PT55 as seed ortholog is 100%.
Bootstrap support for E1C234 as seed ortholog is 99%.

Group of orthologs #1918. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 G.gallus:393

F6T8R8              	100.00%		E1BU41              	100.00%
Bootstrap support for F6T8R8 as seed ortholog is 100%.
Bootstrap support for E1BU41 as seed ortholog is 100%.

Group of orthologs #1919. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 G.gallus:319

F6TX56              	100.00%		P84172              	100.00%
Bootstrap support for F6TX56 as seed ortholog is 100%.
Bootstrap support for P84172 as seed ortholog is 100%.

Group of orthologs #1920. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 G.gallus:393

F6TJS2              	100.00%		Q5ZJH8              	100.00%
Bootstrap support for F6TJS2 as seed ortholog is 100%.
Bootstrap support for Q5ZJH8 as seed ortholog is 100%.

Group of orthologs #1921. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 G.gallus:393

H2XZE5              	100.00%		E1C4X5              	100.00%
Bootstrap support for H2XZE5 as seed ortholog is 100%.
Bootstrap support for E1C4X5 as seed ortholog is 100%.

Group of orthologs #1922. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 G.gallus:392

F7AK04              	100.00%		E1BXT1              	100.00%
                    	       		F1P1G5              	13.41%
Bootstrap support for F7AK04 as seed ortholog is 95%.
Bootstrap support for E1BXT1 as seed ortholog is 100%.

Group of orthologs #1923. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 G.gallus:392

F6SGZ6              	100.00%		E1C6S7              	100.00%
Bootstrap support for F6SGZ6 as seed ortholog is 100%.
Bootstrap support for E1C6S7 as seed ortholog is 100%.

Group of orthologs #1924. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 G.gallus:392

F6VXM8              	100.00%		E1C702              	100.00%
Bootstrap support for F6VXM8 as seed ortholog is 100%.
Bootstrap support for E1C702 as seed ortholog is 100%.

Group of orthologs #1925. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 G.gallus:160

F7B9D6              	100.00%		E1C503              	100.00%
Bootstrap support for F7B9D6 as seed ortholog is 100%.
Bootstrap support for E1C503 as seed ortholog is 100%.

Group of orthologs #1926. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 G.gallus:392

H2XQ91              	100.00%		E1C008              	100.00%
Bootstrap support for H2XQ91 as seed ortholog is 100%.
Bootstrap support for E1C008 as seed ortholog is 100%.

Group of orthologs #1927. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 G.gallus:392

H2XVE9              	100.00%		E1C7T6              	100.00%
Bootstrap support for H2XVE9 as seed ortholog is 100%.
Bootstrap support for E1C7T6 as seed ortholog is 100%.

Group of orthologs #1928. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 G.gallus:391

F7A9J1              	100.00%		E1C0B2              	100.00%
                    	       		F1NFJ5              	27.31%
Bootstrap support for F7A9J1 as seed ortholog is 100%.
Bootstrap support for E1C0B2 as seed ortholog is 100%.

Group of orthologs #1929. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 G.gallus:238

F6PTJ9              	100.00%		E1BVR7              	100.00%
Bootstrap support for F6PTJ9 as seed ortholog is 100%.
Bootstrap support for E1BVR7 as seed ortholog is 98%.

Group of orthologs #1930. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 G.gallus:391

F6WEC1              	100.00%		F1NFE2              	100.00%
Bootstrap support for F6WEC1 as seed ortholog is 100%.
Bootstrap support for F1NFE2 as seed ortholog is 100%.

Group of orthologs #1931. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 G.gallus:391

F6U8U5              	100.00%		F1NN26              	100.00%
Bootstrap support for F6U8U5 as seed ortholog is 100%.
Bootstrap support for F1NN26 as seed ortholog is 100%.

Group of orthologs #1932. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 G.gallus:312

H2Y256              	100.00%		E1BQG6              	100.00%
Bootstrap support for H2Y256 as seed ortholog is 100%.
Bootstrap support for E1BQG6 as seed ortholog is 100%.

Group of orthologs #1933. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 G.gallus:391

F6UA87              	100.00%		Q5ZHY0              	100.00%
Bootstrap support for F6UA87 as seed ortholog is 100%.
Bootstrap support for Q5ZHY0 as seed ortholog is 100%.

Group of orthologs #1934. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 G.gallus:391

Q8T886              	100.00%		F1NX70              	100.00%
Bootstrap support for Q8T886 as seed ortholog is 100%.
Bootstrap support for F1NX70 as seed ortholog is 100%.

Group of orthologs #1935. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 G.gallus:390

F6T143              	100.00%		E1C6B7              	100.00%
                    	       		E1C9G3              	35.90%
                    	       		F1P5R4              	12.40%
Bootstrap support for F6T143 as seed ortholog is 100%.
Bootstrap support for E1C6B7 as seed ortholog is 100%.

Group of orthologs #1936. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 G.gallus:321

F6YR71              	100.00%		F1NP08              	100.00%
                    	       		E1C4X2              	22.81%
Bootstrap support for F6YR71 as seed ortholog is 100%.
Bootstrap support for F1NP08 as seed ortholog is 100%.

Group of orthologs #1937. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 G.gallus:390

F7A0D6              	100.00%		F1P4R1              	100.00%
                    	       		E1C7F4              	35.08%
Bootstrap support for F7A0D6 as seed ortholog is 100%.
Bootstrap support for F1P4R1 as seed ortholog is 100%.

Group of orthologs #1938. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 G.gallus:390

F6S8Z0              	100.00%		F1NPF2              	100.00%
Bootstrap support for F6S8Z0 as seed ortholog is 100%.
Bootstrap support for F1NPF2 as seed ortholog is 100%.

Group of orthologs #1939. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 G.gallus:390

H2XP72              	100.00%		E1C7E2              	100.00%
Bootstrap support for H2XP72 as seed ortholog is 100%.
Bootstrap support for E1C7E2 as seed ortholog is 100%.

Group of orthologs #1940. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 G.gallus:227

F6VMY2              	100.00%		Q5ZKU5              	100.00%
Bootstrap support for F6VMY2 as seed ortholog is 100%.
Bootstrap support for Q5ZKU5 as seed ortholog is 100%.

Group of orthologs #1941. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 G.gallus:138

F6PJI6              	100.00%		P19352              	100.00%
Q07068              	98.56%		P04268              	57.14%
Bootstrap support for F6PJI6 as seed ortholog is 99%.
Bootstrap support for P19352 as seed ortholog is 100%.

Group of orthologs #1942. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 G.gallus:389

F6YQM8              	100.00%		F1NWP0              	100.00%
                    	       		F1NV87              	48.09%
Bootstrap support for F6YQM8 as seed ortholog is 100%.
Bootstrap support for F1NWP0 as seed ortholog is 100%.

Group of orthologs #1943. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 G.gallus:95

H2XVX5              	100.00%		E1BT77              	100.00%
Bootstrap support for H2XVX5 as seed ortholog is 100%.
Bootstrap support for E1BT77 as seed ortholog is 99%.

Group of orthologs #1944. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 G.gallus:228

F6T0J5              	100.00%		O13268              	100.00%
Bootstrap support for F6T0J5 as seed ortholog is 100%.
Bootstrap support for O13268 as seed ortholog is 100%.

Group of orthologs #1945. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 G.gallus:389

H2XR46              	100.00%		F1NBD8              	100.00%
Bootstrap support for H2XR46 as seed ortholog is 100%.
Bootstrap support for F1NBD8 as seed ortholog is 100%.

Group of orthologs #1946. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 G.gallus:389

F7A4J9              	100.00%		F1P3F5              	100.00%
Bootstrap support for F7A4J9 as seed ortholog is 100%.
Bootstrap support for F1P3F5 as seed ortholog is 100%.

Group of orthologs #1947. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 G.gallus:389

F6YIJ5              	100.00%		Q5ZKB3              	100.00%
Bootstrap support for F6YIJ5 as seed ortholog is 100%.
Bootstrap support for Q5ZKB3 as seed ortholog is 100%.

Group of orthologs #1948. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 G.gallus:388

F6XS01              	100.00%		P17923              	100.00%
                    	       		Q90932              	22.64%
                    	       		P17924              	21.63%
                    	       		P17926              	19.45%
Bootstrap support for F6XS01 as seed ortholog is 100%.
Bootstrap support for P17923 as seed ortholog is 100%.

Group of orthologs #1949. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 G.gallus:111

F6WQ28              	100.00%		F1NE11              	100.00%
                    	       		F1NV37              	37.68%
Bootstrap support for F6WQ28 as seed ortholog is 100%.
Bootstrap support for F1NE11 as seed ortholog is 99%.

Group of orthologs #1950. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 G.gallus:188

F6XLK3              	100.00%		P00340              	100.00%
                    	       		P00337              	38.65%
Bootstrap support for F6XLK3 as seed ortholog is 100%.
Bootstrap support for P00340 as seed ortholog is 100%.

Group of orthologs #1951. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 G.gallus:33

F6ZNF4              	100.00%		P22770              	100.00%
                    	       		Q03481              	51.15%
Bootstrap support for F6ZNF4 as seed ortholog is 99%.
Bootstrap support for P22770 as seed ortholog is 79%.

Group of orthologs #1952. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 G.gallus:388

F6RZ45              	100.00%		E1C760              	100.00%
Bootstrap support for F6RZ45 as seed ortholog is 100%.
Bootstrap support for E1C760 as seed ortholog is 100%.

Group of orthologs #1953. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 G.gallus:388

F6UCG6              	100.00%		E1C6T3              	100.00%
Bootstrap support for F6UCG6 as seed ortholog is 100%.
Bootstrap support for E1C6T3 as seed ortholog is 100%.

Group of orthologs #1954. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 G.gallus:388

F6YSX7              	100.00%		E1C548              	100.00%
Bootstrap support for F6YSX7 as seed ortholog is 100%.
Bootstrap support for E1C548 as seed ortholog is 100%.

Group of orthologs #1955. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 G.gallus:234

F6VEF4              	100.00%		F1NG76              	100.00%
Bootstrap support for F6VEF4 as seed ortholog is 100%.
Bootstrap support for F1NG76 as seed ortholog is 100%.

Group of orthologs #1956. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 G.gallus:388

H2XMQ8              	100.00%		E1BT45              	100.00%
Bootstrap support for H2XMQ8 as seed ortholog is 100%.
Bootstrap support for E1BT45 as seed ortholog is 100%.

Group of orthologs #1957. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 G.gallus:388

H2XN47              	100.00%		E1BVD4              	100.00%
Bootstrap support for H2XN47 as seed ortholog is 100%.
Bootstrap support for E1BVD4 as seed ortholog is 100%.

Group of orthologs #1958. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 G.gallus:388

H2XVC3              	100.00%		F1NUD1              	100.00%
Bootstrap support for H2XVC3 as seed ortholog is 100%.
Bootstrap support for F1NUD1 as seed ortholog is 100%.

Group of orthologs #1959. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 G.gallus:387

F6TW46              	100.00%		E1C200              	100.00%
                    	       		Q5ZJI0              	30.54%
Bootstrap support for F6TW46 as seed ortholog is 100%.
Bootstrap support for E1C200 as seed ortholog is 100%.

Group of orthologs #1960. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:387

F6TYL9              	100.00%		E1BR09              	100.00%
Bootstrap support for F6TYL9 as seed ortholog is 97%.
Bootstrap support for E1BR09 as seed ortholog is 100%.

Group of orthologs #1961. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 G.gallus:246

F6QMD4              	100.00%		E1C6B4              	100.00%
Bootstrap support for F6QMD4 as seed ortholog is 99%.
Bootstrap support for E1C6B4 as seed ortholog is 100%.

Group of orthologs #1962. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 G.gallus:387

F7AA18              	100.00%		E1BXK0              	100.00%
Bootstrap support for F7AA18 as seed ortholog is 100%.
Bootstrap support for E1BXK0 as seed ortholog is 100%.

Group of orthologs #1963. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 G.gallus:387

F6VXA3              	100.00%		F1NWJ7              	100.00%
Bootstrap support for F6VXA3 as seed ortholog is 100%.
Bootstrap support for F1NWJ7 as seed ortholog is 100%.

Group of orthologs #1964. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 G.gallus:240

H2XUE3              	100.00%		E1C006              	100.00%
Bootstrap support for H2XUE3 as seed ortholog is 100%.
Bootstrap support for E1C006 as seed ortholog is 100%.

Group of orthologs #1965. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 G.gallus:274

F7ASM2              	100.00%		Q5ZJN4              	100.00%
Bootstrap support for F7ASM2 as seed ortholog is 100%.
Bootstrap support for Q5ZJN4 as seed ortholog is 100%.

Group of orthologs #1966. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 G.gallus:386

F6YA02              	100.00%		F1P0E4              	100.00%
                    	       		E1BYN7              	47.06%
                    	       		E1C2E3              	36.36%
Bootstrap support for F6YA02 as seed ortholog is 100%.
Bootstrap support for F1P0E4 as seed ortholog is 100%.

Group of orthologs #1967. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 G.gallus:386

F6SXN2              	100.00%		Q9I993              	100.00%
                    	       		E1C8E0              	5.94%
Bootstrap support for F6SXN2 as seed ortholog is 99%.
Bootstrap support for Q9I993 as seed ortholog is 100%.

Group of orthologs #1968. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 G.gallus:386

F6T2X1              	100.00%		E1BYP7              	100.00%
Bootstrap support for F6T2X1 as seed ortholog is 100%.
Bootstrap support for E1BYP7 as seed ortholog is 100%.

Group of orthologs #1969. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 G.gallus:91

F6THW7              	100.00%		F1NCG7              	100.00%
Bootstrap support for F6THW7 as seed ortholog is 100%.
Bootstrap support for F1NCG7 as seed ortholog is 99%.

Group of orthologs #1970. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 G.gallus:386

F7AN36              	100.00%		E1BV41              	100.00%
Bootstrap support for F7AN36 as seed ortholog is 100%.
Bootstrap support for E1BV41 as seed ortholog is 100%.

Group of orthologs #1971. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 G.gallus:386

F6T4V8              	100.00%		Q5ZIF3              	100.00%
Bootstrap support for F6T4V8 as seed ortholog is 100%.
Bootstrap support for Q5ZIF3 as seed ortholog is 100%.

Group of orthologs #1972. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 G.gallus:386

F7B670              	100.00%		F1NVZ0              	100.00%
Bootstrap support for F7B670 as seed ortholog is 100%.
Bootstrap support for F1NVZ0 as seed ortholog is 100%.

Group of orthologs #1973. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 G.gallus:336

H2XRS4              	100.00%		F1NI39              	100.00%
Bootstrap support for H2XRS4 as seed ortholog is 100%.
Bootstrap support for F1NI39 as seed ortholog is 100%.

Group of orthologs #1974. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 G.gallus:386

H2XTB0              	100.00%		P50890              	100.00%
Bootstrap support for H2XTB0 as seed ortholog is 100%.
Bootstrap support for P50890 as seed ortholog is 100%.

Group of orthologs #1975. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 G.gallus:385

F6S1A9              	100.00%		F1NXU7              	100.00%
                    	       		E1C874              	9.56%
Bootstrap support for F6S1A9 as seed ortholog is 100%.
Bootstrap support for F1NXU7 as seed ortholog is 100%.

Group of orthologs #1976. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 G.gallus:385

F6XML2              	100.00%		F1NW24              	100.00%
                    	       		Q5F3E8              	28.57%
Bootstrap support for F6XML2 as seed ortholog is 100%.
Bootstrap support for F1NW24 as seed ortholog is 100%.

Group of orthologs #1977. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 G.gallus:385

F6ZSI5              	100.00%		E1C9G8              	100.00%
Bootstrap support for F6ZSI5 as seed ortholog is 99%.
Bootstrap support for E1C9G8 as seed ortholog is 100%.

Group of orthologs #1978. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 G.gallus:297

F6SPI7              	100.00%		Q5ZLN0              	100.00%
Bootstrap support for F6SPI7 as seed ortholog is 100%.
Bootstrap support for Q5ZLN0 as seed ortholog is 100%.

Group of orthologs #1979. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 G.gallus:385

F6TX35              	100.00%		Q5R1S9              	100.00%
Bootstrap support for F6TX35 as seed ortholog is 100%.
Bootstrap support for Q5R1S9 as seed ortholog is 100%.

Group of orthologs #1980. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 G.gallus:85

F6T724              	100.00%		F1NYJ1              	100.00%
                    	       		P09648              	21.24%
Bootstrap support for F6T724 as seed ortholog is 65%.
Alternative seed ortholog is F6T6N4 (14 bits away from this cluster)
Bootstrap support for F1NYJ1 as seed ortholog is 99%.

Group of orthologs #1981. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 G.gallus:384

F6RDK2              	100.00%		F1NH75              	100.00%
Bootstrap support for F6RDK2 as seed ortholog is 100%.
Bootstrap support for F1NH75 as seed ortholog is 100%.

Group of orthologs #1982. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 G.gallus:384

F6ZUH0              	100.00%		E1BYM3              	100.00%
Bootstrap support for F6ZUH0 as seed ortholog is 100%.
Bootstrap support for E1BYM3 as seed ortholog is 100%.

Group of orthologs #1983. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 G.gallus:384

F6T7M7              	100.00%		F1NMW7              	100.00%
Bootstrap support for F6T7M7 as seed ortholog is 100%.
Bootstrap support for F1NMW7 as seed ortholog is 100%.

Group of orthologs #1984. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 G.gallus:272

F6QDT9              	100.00%		F1NYV9              	100.00%
Bootstrap support for F6QDT9 as seed ortholog is 99%.
Bootstrap support for F1NYV9 as seed ortholog is 100%.

Group of orthologs #1985. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 G.gallus:384

F6XIZ4              	100.00%		Q5ZHP3              	100.00%
Bootstrap support for F6XIZ4 as seed ortholog is 100%.
Bootstrap support for Q5ZHP3 as seed ortholog is 100%.

Group of orthologs #1986. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 G.gallus:384

F7B3X8              	100.00%		P55168              	100.00%
Bootstrap support for F7B3X8 as seed ortholog is 100%.
Bootstrap support for P55168 as seed ortholog is 100%.

Group of orthologs #1987. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 G.gallus:226

F6RBM9              	100.00%		F1NNP0              	100.00%
F6Z1A5              	100.00%		
F6T5A7              	68.92%		
F6RID1              	10.96%		
Bootstrap support for F6RBM9 as seed ortholog is 70%.
Alternative seed ortholog is F6T010 (23 bits away from this cluster)
Bootstrap support for F6Z1A5 as seed ortholog is 69%.
Alternative seed ortholog is F6T010 (23 bits away from this cluster)
Bootstrap support for F1NNP0 as seed ortholog is 100%.

Group of orthologs #1988. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:383

Q1RPW1              	100.00%		F1P165              	100.00%
                    	       		F1NVH3              	29.97%
                    	       		F1NP33              	17.98%
Bootstrap support for Q1RPW1 as seed ortholog is 100%.
Bootstrap support for F1P165 as seed ortholog is 100%.

Group of orthologs #1989. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 G.gallus:383

F6RQQ8              	100.00%		E1BST3              	100.00%
                    	       		F1NSH3              	35.61%
Bootstrap support for F6RQQ8 as seed ortholog is 100%.
Bootstrap support for E1BST3 as seed ortholog is 100%.

Group of orthologs #1990. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 G.gallus:383

F6Q909              	100.00%		E1BYF8              	100.00%
                    	       		F1N998              	17.63%
Bootstrap support for F6Q909 as seed ortholog is 100%.
Bootstrap support for E1BYF8 as seed ortholog is 100%.

Group of orthologs #1991. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 G.gallus:289

F6WR94              	100.00%		E1BS02              	100.00%
Bootstrap support for F6WR94 as seed ortholog is 100%.
Bootstrap support for E1BS02 as seed ortholog is 100%.

Group of orthologs #1992. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 G.gallus:383

F6RDQ7              	100.00%		E1C6F3              	100.00%
Bootstrap support for F6RDQ7 as seed ortholog is 100%.
Bootstrap support for E1C6F3 as seed ortholog is 100%.

Group of orthologs #1993. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 G.gallus:383

F6Q3Y2              	100.00%		F1NXG0              	100.00%
Bootstrap support for F6Q3Y2 as seed ortholog is 100%.
Bootstrap support for F1NXG0 as seed ortholog is 100%.

Group of orthologs #1994. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 G.gallus:193

F6YGL5              	100.00%		F1NI24              	100.00%
Bootstrap support for F6YGL5 as seed ortholog is 100%.
Bootstrap support for F1NI24 as seed ortholog is 100%.

Group of orthologs #1995. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 G.gallus:323

F7AAS8              	100.00%		F1NDD1              	100.00%
Bootstrap support for F7AAS8 as seed ortholog is 100%.
Bootstrap support for F1NDD1 as seed ortholog is 100%.

Group of orthologs #1996. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 G.gallus:383

F6Z7A9              	100.00%		F1NL71              	100.00%
Bootstrap support for F6Z7A9 as seed ortholog is 100%.
Bootstrap support for F1NL71 as seed ortholog is 100%.

Group of orthologs #1997. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 G.gallus:169

Q4H367              	100.00%		E1BVU2              	100.00%
Bootstrap support for Q4H367 as seed ortholog is 100%.
Bootstrap support for E1BVU2 as seed ortholog is 99%.

Group of orthologs #1998. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:383

F6WYT3              	100.00%		Q5ZHN9              	100.00%
Bootstrap support for F6WYT3 as seed ortholog is 96%.
Bootstrap support for Q5ZHN9 as seed ortholog is 100%.

Group of orthologs #1999. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 G.gallus:383

F6YJ84              	100.00%		Q5ZID1              	100.00%
Bootstrap support for F6YJ84 as seed ortholog is 100%.
Bootstrap support for Q5ZID1 as seed ortholog is 100%.

Group of orthologs #2000. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 G.gallus:383

H2Y240              	100.00%		F1NSQ5              	100.00%
Bootstrap support for H2Y240 as seed ortholog is 100%.
Bootstrap support for F1NSQ5 as seed ortholog is 100%.

Group of orthologs #2001. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 G.gallus:382

F6YFM8              	100.00%		F1NJ05              	100.00%
                    	       		F1NJL1              	6.97%
Bootstrap support for F6YFM8 as seed ortholog is 100%.
Bootstrap support for F1NJ05 as seed ortholog is 100%.

Group of orthologs #2002. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 G.gallus:256

F6XX66              	100.00%		F1NPF6              	100.00%
                    	       		Q5ZJP9              	100.00%
Bootstrap support for F6XX66 as seed ortholog is 100%.
Bootstrap support for F1NPF6 as seed ortholog is 100%.
Bootstrap support for Q5ZJP9 as seed ortholog is 100%.

Group of orthologs #2003. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 G.gallus:328

F6R2V7              	100.00%		E1BRQ4              	100.00%
Bootstrap support for F6R2V7 as seed ortholog is 100%.
Bootstrap support for E1BRQ4 as seed ortholog is 100%.

Group of orthologs #2004. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 G.gallus:319

F7AIP5              	100.00%		E1C4H3              	100.00%
Bootstrap support for F7AIP5 as seed ortholog is 100%.
Bootstrap support for E1C4H3 as seed ortholog is 100%.

Group of orthologs #2005. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 G.gallus:382

F6ZG25              	100.00%		F1NCV8              	100.00%
Bootstrap support for F6ZG25 as seed ortholog is 100%.
Bootstrap support for F1NCV8 as seed ortholog is 100%.

Group of orthologs #2006. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 G.gallus:382

F6TFE2              	100.00%		Q5ZI10              	100.00%
Bootstrap support for F6TFE2 as seed ortholog is 100%.
Bootstrap support for Q5ZI10 as seed ortholog is 100%.

Group of orthologs #2007. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 G.gallus:382

H2XJZ5              	100.00%		F1P216              	100.00%
Bootstrap support for H2XJZ5 as seed ortholog is 100%.
Bootstrap support for F1P216 as seed ortholog is 100%.

Group of orthologs #2008. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 G.gallus:381

F6WMV3              	100.00%		Q5ZJ31              	100.00%
                    	       		Q5ZLD2              	21.61%
Bootstrap support for F6WMV3 as seed ortholog is 98%.
Bootstrap support for Q5ZJ31 as seed ortholog is 100%.

Group of orthologs #2009. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 G.gallus:69

F7B376              	100.00%		E1C360              	100.00%
Bootstrap support for F7B376 as seed ortholog is 100%.
Bootstrap support for E1C360 as seed ortholog is 98%.

Group of orthologs #2010. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 G.gallus:381

F6TBB0              	100.00%		Q5F3H9              	100.00%
Bootstrap support for F6TBB0 as seed ortholog is 100%.
Bootstrap support for Q5F3H9 as seed ortholog is 100%.

Group of orthologs #2011. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 G.gallus:141

H2XT98              	100.00%		F1NI95              	100.00%
Bootstrap support for H2XT98 as seed ortholog is 100%.
Bootstrap support for F1NI95 as seed ortholog is 100%.

Group of orthologs #2012. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 G.gallus:381

H2XX66              	100.00%		F1P081              	100.00%
Bootstrap support for H2XX66 as seed ortholog is 100%.
Bootstrap support for F1P081 as seed ortholog is 100%.

Group of orthologs #2013. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 G.gallus:170

H2XW16              	100.00%		P53488              	100.00%
Bootstrap support for H2XW16 as seed ortholog is 83%.
Bootstrap support for P53488 as seed ortholog is 100%.

Group of orthologs #2014. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 G.gallus:380

F6Z2G5              	100.00%		F1P4R2              	100.00%
                    	       		E1BWE7              	44.98%
Bootstrap support for F6Z2G5 as seed ortholog is 100%.
Bootstrap support for F1P4R2 as seed ortholog is 100%.

Group of orthologs #2015. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 G.gallus:304

F6Y6M4              	100.00%		E1BUZ3              	100.00%
Bootstrap support for F6Y6M4 as seed ortholog is 98%.
Bootstrap support for E1BUZ3 as seed ortholog is 100%.

Group of orthologs #2016. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 G.gallus:380

F6ZQG8              	100.00%		E1C066              	100.00%
Bootstrap support for F6ZQG8 as seed ortholog is 100%.
Bootstrap support for E1C066 as seed ortholog is 100%.

Group of orthologs #2017. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 G.gallus:380

F6RQS4              	100.00%		O93257              	100.00%
Bootstrap support for F6RQS4 as seed ortholog is 100%.
Bootstrap support for O93257 as seed ortholog is 100%.

Group of orthologs #2018. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 G.gallus:380

F6XE85              	100.00%		Q5ZLS7              	100.00%
Bootstrap support for F6XE85 as seed ortholog is 100%.
Bootstrap support for Q5ZLS7 as seed ortholog is 100%.

Group of orthologs #2019. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 G.gallus:62

F7AFI4              	100.00%		E1BTV1              	100.00%
F6YCJ4              	47.75%		
F6YGS0              	10.67%		
Bootstrap support for F7AFI4 as seed ortholog is 100%.
Bootstrap support for E1BTV1 as seed ortholog is 99%.

Group of orthologs #2020. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 G.gallus:379

F6S8B5              	100.00%		E1C9H8              	100.00%
                    	       		F1NC65              	18.63%
Bootstrap support for F6S8B5 as seed ortholog is 100%.
Bootstrap support for E1C9H8 as seed ortholog is 100%.

Group of orthologs #2021. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 G.gallus:379

F7BJB6              	100.00%		F1P1A9              	100.00%
                    	       		F1NHU1              	56.20%
Bootstrap support for F7BJB6 as seed ortholog is 100%.
Bootstrap support for F1P1A9 as seed ortholog is 100%.

Group of orthologs #2022. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 G.gallus:379

F6WAN9              	100.00%		E1C454              	100.00%
Bootstrap support for F6WAN9 as seed ortholog is 100%.
Bootstrap support for E1C454 as seed ortholog is 100%.

Group of orthologs #2023. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 G.gallus:379

F7BNX7              	100.00%		E1BRS6              	100.00%
Bootstrap support for F7BNX7 as seed ortholog is 100%.
Bootstrap support for E1BRS6 as seed ortholog is 100%.

Group of orthologs #2024. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 G.gallus:379

H2XP92              	100.00%		E1BWW2              	100.00%
Bootstrap support for H2XP92 as seed ortholog is 100%.
Bootstrap support for E1BWW2 as seed ortholog is 100%.

Group of orthologs #2025. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 G.gallus:320

F6RBK2              	100.00%		F1P2Y8              	100.00%
Bootstrap support for F6RBK2 as seed ortholog is 100%.
Bootstrap support for F1P2Y8 as seed ortholog is 100%.

Group of orthologs #2026. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 G.gallus:378

F6VYS2              	100.00%		F1P5H8              	100.00%
                    	       		F1P4C7              	33.72%
                    	       		F1NBP6              	14.18%
Bootstrap support for F6VYS2 as seed ortholog is 100%.
Bootstrap support for F1P5H8 as seed ortholog is 100%.

Group of orthologs #2027. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 G.gallus:378

F6V7W7              	100.00%		Q04205              	100.00%
                    	       		F1P1J0              	99.24%
                    	       		F1NE19              	21.45%
Bootstrap support for F6V7W7 as seed ortholog is 100%.
Bootstrap support for Q04205 as seed ortholog is 100%.

Group of orthologs #2028. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 G.gallus:34

F6Z9D3              	100.00%		E1BQ82              	100.00%
Bootstrap support for F6Z9D3 as seed ortholog is 100%.
Bootstrap support for E1BQ82 as seed ortholog is 89%.

Group of orthologs #2029. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 G.gallus:378

F6XER0              	100.00%		E1C6C0              	100.00%
Bootstrap support for F6XER0 as seed ortholog is 100%.
Bootstrap support for E1C6C0 as seed ortholog is 100%.

Group of orthologs #2030. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 G.gallus:378

F6V9X6              	100.00%		F1NBR0              	100.00%
Bootstrap support for F6V9X6 as seed ortholog is 100%.
Bootstrap support for F1NBR0 as seed ortholog is 100%.

Group of orthologs #2031. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 G.gallus:378

F6YSB9              	100.00%		Q9PTI4              	100.00%
Bootstrap support for F6YSB9 as seed ortholog is 100%.
Bootstrap support for Q9PTI4 as seed ortholog is 100%.

Group of orthologs #2032. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 G.gallus:222

H2XR71              	100.00%		E1BW87              	100.00%
Bootstrap support for H2XR71 as seed ortholog is 100%.
Bootstrap support for E1BW87 as seed ortholog is 100%.

Group of orthologs #2033. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 G.gallus:377

F7B310              	100.00%		F1N9I3              	100.00%
Bootstrap support for F7B310 as seed ortholog is 100%.
Bootstrap support for F1N9I3 as seed ortholog is 100%.

Group of orthologs #2034. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 G.gallus:377

F6XTQ1              	100.00%		F1NNP6              	100.00%
Bootstrap support for F6XTQ1 as seed ortholog is 100%.
Bootstrap support for F1NNP6 as seed ortholog is 100%.

Group of orthologs #2035. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 G.gallus:377

F6VYK8              	100.00%		F1NVN3              	100.00%
Bootstrap support for F6VYK8 as seed ortholog is 100%.
Bootstrap support for F1NVN3 as seed ortholog is 100%.

Group of orthologs #2036. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 G.gallus:377

H2XJG6              	100.00%		F1NHV9              	100.00%
Bootstrap support for H2XJG6 as seed ortholog is 100%.
Bootstrap support for F1NHV9 as seed ortholog is 100%.

Group of orthologs #2037. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 G.gallus:116

F6URK3              	100.00%		E1C1N9              	100.00%
                    	       		E1BWJ6              	36.16%
Bootstrap support for F6URK3 as seed ortholog is 100%.
Bootstrap support for E1C1N9 as seed ortholog is 99%.

Group of orthologs #2038. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 G.gallus:160

F6RGL3              	100.00%		F1NE57              	100.00%
                    	       		E1BYT9              	30.21%
Bootstrap support for F6RGL3 as seed ortholog is 100%.
Bootstrap support for F1NE57 as seed ortholog is 99%.

Group of orthologs #2039. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 G.gallus:324

F7BLG0              	100.00%		E1BSN8              	100.00%
                    	       		Q5ZLR6              	48.95%
Bootstrap support for F7BLG0 as seed ortholog is 100%.
Bootstrap support for E1BSN8 as seed ortholog is 100%.

Group of orthologs #2040. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 G.gallus:173

H2Y1F3              	100.00%		P49578              	100.00%
                    	       		F1P0I0              	16.76%
Bootstrap support for H2Y1F3 as seed ortholog is 78%.
Bootstrap support for P49578 as seed ortholog is 99%.

Group of orthologs #2041. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 G.gallus:376

F6W713              	100.00%		E1BRK4              	100.00%
Bootstrap support for F6W713 as seed ortholog is 100%.
Bootstrap support for E1BRK4 as seed ortholog is 100%.

Group of orthologs #2042. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 G.gallus:258

F7A801              	100.00%		F1NRK4              	100.00%
Bootstrap support for F7A801 as seed ortholog is 100%.
Bootstrap support for F1NRK4 as seed ortholog is 100%.

Group of orthologs #2043. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 G.gallus:376

F7ABL1              	100.00%		F1P3A0              	100.00%
Bootstrap support for F7ABL1 as seed ortholog is 100%.
Bootstrap support for F1P3A0 as seed ortholog is 100%.

Group of orthologs #2044. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 G.gallus:376

F7BMB7              	100.00%		Q5ZLI9              	100.00%
Bootstrap support for F7BMB7 as seed ortholog is 100%.
Bootstrap support for Q5ZLI9 as seed ortholog is 100%.

Group of orthologs #2045. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 G.gallus:376

H2Y3Q6              	100.00%		P28337              	100.00%
Bootstrap support for H2Y3Q6 as seed ortholog is 100%.
Bootstrap support for P28337 as seed ortholog is 100%.

Group of orthologs #2046. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:375

F6VDU4              	100.00%		E1C452              	100.00%
H2XRS2              	18.17%		F1NP71              	74.30%
F6U734              	17.49%		F1NH57              	25.70%
                    	       		F1NJJ8              	15.44%
                    	       		F1NWP2              	14.16%
                    	       		F1NYQ0              	13.99%
Bootstrap support for F6VDU4 as seed ortholog is 98%.
Bootstrap support for E1C452 as seed ortholog is 100%.

Group of orthologs #2047. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 G.gallus:249

F7AGV3              	100.00%		F1N9E1              	100.00%
                    	       		F1NAP7              	22.40%
                    	       		F1NAC3              	16.74%
                    	       		F1N803              	8.33%
Bootstrap support for F7AGV3 as seed ortholog is 77%.
Bootstrap support for F1N9E1 as seed ortholog is 99%.

Group of orthologs #2048. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 G.gallus:375

F6PYR8              	100.00%		E1BWS3              	100.00%
                    	       		E1C8F4              	53.11%
                    	       		Q5ZI04              	53.11%
Bootstrap support for F6PYR8 as seed ortholog is 100%.
Bootstrap support for E1BWS3 as seed ortholog is 100%.

Group of orthologs #2049. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 G.gallus:123

F6U7Z2              	100.00%		F1P5Q6              	100.00%
                    	       		H9KZC9              	19.90%
Bootstrap support for F6U7Z2 as seed ortholog is 100%.
Bootstrap support for F1P5Q6 as seed ortholog is 99%.

Group of orthologs #2050. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 G.gallus:375

F6PM75              	100.00%		E1BZU0              	100.00%
Bootstrap support for F6PM75 as seed ortholog is 100%.
Bootstrap support for E1BZU0 as seed ortholog is 100%.

Group of orthologs #2051. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:249

F6SJF0              	100.00%		F1NHN2              	100.00%
Bootstrap support for F6SJF0 as seed ortholog is 100%.
Bootstrap support for F1NHN2 as seed ortholog is 100%.

Group of orthologs #2052. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 G.gallus:375

H2XK69              	100.00%		E1C1V4              	100.00%
Bootstrap support for H2XK69 as seed ortholog is 100%.
Bootstrap support for E1C1V4 as seed ortholog is 100%.

Group of orthologs #2053. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 G.gallus:375

F7AMR5              	100.00%		P47838              	100.00%
Bootstrap support for F7AMR5 as seed ortholog is 100%.
Bootstrap support for P47838 as seed ortholog is 100%.

Group of orthologs #2054. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 G.gallus:271

F6ZNA8              	100.00%		E1BTE1              	100.00%
                    	       		F1N8M3              	6.55%
Bootstrap support for F6ZNA8 as seed ortholog is 100%.
Bootstrap support for E1BTE1 as seed ortholog is 100%.

Group of orthologs #2055. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 G.gallus:374

F6XWN6              	100.00%		F1NAP1              	100.00%
Bootstrap support for F6XWN6 as seed ortholog is 100%.
Bootstrap support for F1NAP1 as seed ortholog is 100%.

Group of orthologs #2056. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 G.gallus:374

H2XR31              	100.00%		E1BUV8              	100.00%
Bootstrap support for H2XR31 as seed ortholog is 100%.
Bootstrap support for E1BUV8 as seed ortholog is 100%.

Group of orthologs #2057. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 G.gallus:374

F6SKK8              	100.00%		Q5F370              	100.00%
Bootstrap support for F6SKK8 as seed ortholog is 100%.
Bootstrap support for Q5F370 as seed ortholog is 100%.

Group of orthologs #2058. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 G.gallus:49

F6YUB3              	100.00%		F1P2L9              	100.00%
Bootstrap support for F6YUB3 as seed ortholog is 100%.
Bootstrap support for F1P2L9 as seed ortholog is 93%.

Group of orthologs #2059. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 G.gallus:232

H2XJG5              	100.00%		F1NUM0              	100.00%
Bootstrap support for H2XJG5 as seed ortholog is 100%.
Bootstrap support for F1NUM0 as seed ortholog is 100%.

Group of orthologs #2060. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 G.gallus:374

F6UMP0              	100.00%		Q98SH3              	100.00%
Bootstrap support for F6UMP0 as seed ortholog is 100%.
Bootstrap support for Q98SH3 as seed ortholog is 100%.

Group of orthologs #2061. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 G.gallus:374

F6WZS8              	100.00%		Q5ZM56              	100.00%
Bootstrap support for F6WZS8 as seed ortholog is 100%.
Bootstrap support for Q5ZM56 as seed ortholog is 100%.

Group of orthologs #2062. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 G.gallus:374

H2Y2L0              	100.00%		F1NP29              	100.00%
Bootstrap support for H2Y2L0 as seed ortholog is 100%.
Bootstrap support for F1NP29 as seed ortholog is 100%.

Group of orthologs #2063. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 G.gallus:148

F6SMU1              	100.00%		E1C5M3              	100.00%
                    	       		F1NML9              	35.56%
Bootstrap support for F6SMU1 as seed ortholog is 100%.
Bootstrap support for E1C5M3 as seed ortholog is 99%.

Group of orthologs #2064. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 G.gallus:78

H2Y3D5              	100.00%		F1P2P3              	100.00%
Bootstrap support for H2Y3D5 as seed ortholog is 100%.
Bootstrap support for F1P2P3 as seed ortholog is 96%.

Group of orthologs #2065. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 G.gallus:372

F7BH38              	100.00%		F1NXL4              	100.00%
                    	       		F1P1P1              	7.77%
Bootstrap support for F7BH38 as seed ortholog is 100%.
Bootstrap support for F1NXL4 as seed ortholog is 100%.

Group of orthologs #2066. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:372 G.gallus:157

F6X8P5              	100.00%		E1BXP7              	100.00%
Bootstrap support for F6X8P5 as seed ortholog is 100%.
Bootstrap support for E1BXP7 as seed ortholog is 99%.

Group of orthologs #2067. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 G.gallus:248

F6UJQ6              	100.00%		Q5F389              	100.00%
Bootstrap support for F6UJQ6 as seed ortholog is 100%.
Bootstrap support for Q5F389 as seed ortholog is 100%.

Group of orthologs #2068. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:67

F6PH03              	100.00%		P24503              	100.00%
                    	       		P10288              	57.81%
                    	       		P08641              	21.33%
                    	       		P33145              	20.99%
                    	       		P33150              	9.31%
                    	       		Q90763              	5.64%
                    	       		O93319              	5.57%
Bootstrap support for F6PH03 as seed ortholog is 99%.
Bootstrap support for P24503 as seed ortholog is 87%.

Group of orthologs #2069. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 G.gallus:371

F6SA18              	100.00%		F1P5G6              	100.00%
                    	       		F1NNQ7              	18.38%
                    	       		F1P3J6              	13.14%
Bootstrap support for F6SA18 as seed ortholog is 100%.
Bootstrap support for F1P5G6 as seed ortholog is 100%.

Group of orthologs #2070. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 G.gallus:371

F6RWR9              	100.00%		Q5ZK88              	100.00%
                    	       		Q5ZIZ5              	26.27%
                    	       		F1P555              	25.83%
Bootstrap support for F6RWR9 as seed ortholog is 100%.
Bootstrap support for Q5ZK88 as seed ortholog is 100%.

Group of orthologs #2071. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 G.gallus:274

F6ZLL3              	100.00%		F1NKZ8              	100.00%
                    	       		F1P326              	38.59%
Bootstrap support for F6ZLL3 as seed ortholog is 100%.
Bootstrap support for F1NKZ8 as seed ortholog is 100%.

Group of orthologs #2072. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 G.gallus:255

F6QHU2              	100.00%		E1BYA9              	100.00%
Bootstrap support for F6QHU2 as seed ortholog is 100%.
Bootstrap support for E1BYA9 as seed ortholog is 100%.

Group of orthologs #2073. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 G.gallus:315

F6USY8              	100.00%		E1BQF6              	100.00%
Bootstrap support for F6USY8 as seed ortholog is 100%.
Bootstrap support for E1BQF6 as seed ortholog is 100%.

Group of orthologs #2074. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 G.gallus:249

F6RUQ3              	100.00%		F1NEQ6              	100.00%
Bootstrap support for F6RUQ3 as seed ortholog is 100%.
Bootstrap support for F1NEQ6 as seed ortholog is 100%.

Group of orthologs #2075. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:322

F6SP32              	100.00%		F1NIY8              	100.00%
Bootstrap support for F6SP32 as seed ortholog is 100%.
Bootstrap support for F1NIY8 as seed ortholog is 100%.

Group of orthologs #2076. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 G.gallus:371

F6UHV9              	100.00%		F1NFY6              	100.00%
Bootstrap support for F6UHV9 as seed ortholog is 100%.
Bootstrap support for F1NFY6 as seed ortholog is 100%.

Group of orthologs #2077. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 G.gallus:371

H2XZ54              	100.00%		E1BV97              	100.00%
Bootstrap support for H2XZ54 as seed ortholog is 100%.
Bootstrap support for E1BV97 as seed ortholog is 100%.

Group of orthologs #2078. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 G.gallus:371

F6WGN7              	100.00%		F1NYW6              	100.00%
Bootstrap support for F6WGN7 as seed ortholog is 100%.
Bootstrap support for F1NYW6 as seed ortholog is 100%.

Group of orthologs #2079. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 G.gallus:89

F6Y437              	100.00%		F1NVF7              	100.00%
Bootstrap support for F6Y437 as seed ortholog is 100%.
Bootstrap support for F1NVF7 as seed ortholog is 98%.

Group of orthologs #2080. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 G.gallus:371

H2XVD5              	100.00%		Q7ZT63              	100.00%
Bootstrap support for H2XVD5 as seed ortholog is 100%.
Bootstrap support for Q7ZT63 as seed ortholog is 100%.

Group of orthologs #2081. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 G.gallus:370

F6Q5L2              	100.00%		F1NC49              	100.00%
Bootstrap support for F6Q5L2 as seed ortholog is 100%.
Bootstrap support for F1NC49 as seed ortholog is 100%.

Group of orthologs #2082. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 G.gallus:370

F6XXF0              	100.00%		E1C266              	100.00%
Bootstrap support for F6XXF0 as seed ortholog is 100%.
Bootstrap support for E1C266 as seed ortholog is 100%.

Group of orthologs #2083. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 G.gallus:25

F6X3V2              	100.00%		E1C4N7              	100.00%
Bootstrap support for F6X3V2 as seed ortholog is 100%.
Bootstrap support for E1C4N7 as seed ortholog is 69%.
Alternative seed ortholog is E1BTY4 (25 bits away from this cluster)

Group of orthologs #2084. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 G.gallus:370

H2XMX2              	100.00%		F1P2G6              	100.00%
Bootstrap support for H2XMX2 as seed ortholog is 100%.
Bootstrap support for F1P2G6 as seed ortholog is 100%.

Group of orthologs #2085. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 G.gallus:294

H2XXL3              	100.00%		F1NWU1              	100.00%
Bootstrap support for H2XXL3 as seed ortholog is 100%.
Bootstrap support for F1NWU1 as seed ortholog is 100%.

Group of orthologs #2086. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 G.gallus:369

F6YNP9              	100.00%		Q98ST7              	100.00%
F6R8R2              	20.53%		F1NBR3              	94.05%
F6R8U2              	16.45%		
H2XTA5              	12.03%		
H2XZG6              	10.26%		
F6UCV3              	10.15%		
F7ARX5              	8.61%		
Bootstrap support for F6YNP9 as seed ortholog is 100%.
Bootstrap support for Q98ST7 as seed ortholog is 100%.

Group of orthologs #2087. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

F6QQK4              	100.00%		P26009              	100.00%
                    	       		P26008              	34.60%
Bootstrap support for F6QQK4 as seed ortholog is 92%.
Bootstrap support for P26009 as seed ortholog is 91%.

Group of orthologs #2088. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 G.gallus:369

F6R8G4              	100.00%		E1C7K0              	100.00%
Bootstrap support for F6R8G4 as seed ortholog is 100%.
Bootstrap support for E1C7K0 as seed ortholog is 100%.

Group of orthologs #2089. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 G.gallus:369

F6SKY6              	100.00%		F1NCM6              	100.00%
Bootstrap support for F6SKY6 as seed ortholog is 100%.
Bootstrap support for F1NCM6 as seed ortholog is 100%.

Group of orthologs #2090. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 G.gallus:369

F6T385              	100.00%		F1NDA1              	100.00%
Bootstrap support for F6T385 as seed ortholog is 100%.
Bootstrap support for F1NDA1 as seed ortholog is 100%.

Group of orthologs #2091. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 G.gallus:369

F6Q4Z2              	100.00%		F1P220              	100.00%
Bootstrap support for F6Q4Z2 as seed ortholog is 100%.
Bootstrap support for F1P220 as seed ortholog is 100%.

Group of orthologs #2092. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:176

F6XQX8              	100.00%		Q90771              	100.00%
Bootstrap support for F6XQX8 as seed ortholog is 100%.
Bootstrap support for Q90771 as seed ortholog is 100%.

Group of orthologs #2093. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 G.gallus:368

F6WYE6              	100.00%		E1BYY1              	100.00%
                    	       		F1P0V9              	36.87%
Bootstrap support for F6WYE6 as seed ortholog is 100%.
Bootstrap support for E1BYY1 as seed ortholog is 100%.

Group of orthologs #2094. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 G.gallus:227

F6S3G5              	100.00%		F1NEB5              	100.00%
Bootstrap support for F6S3G5 as seed ortholog is 100%.
Bootstrap support for F1NEB5 as seed ortholog is 100%.

Group of orthologs #2095. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 G.gallus:368

F6YM02              	100.00%		F1P418              	100.00%
Bootstrap support for F6YM02 as seed ortholog is 100%.
Bootstrap support for F1P418 as seed ortholog is 100%.

Group of orthologs #2096. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 G.gallus:279

F7B7X5              	100.00%		E1BV93              	100.00%
                    	       		F1P5U0              	24.88%
                    	       		Q5ZLX4              	24.51%
Bootstrap support for F7B7X5 as seed ortholog is 100%.
Bootstrap support for E1BV93 as seed ortholog is 100%.

Group of orthologs #2097. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 G.gallus:367

F7B779              	100.00%		Q58NQ4              	100.00%
                    	       		F1NQN9              	41.33%
                    	       		F1NEH9              	6.67%
Bootstrap support for F7B779 as seed ortholog is 100%.
Bootstrap support for Q58NQ4 as seed ortholog is 100%.

Group of orthologs #2098. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 G.gallus:367

F6RJ12              	100.00%		F1NGQ1              	100.00%
                    	       		F1NXP1              	12.74%
Bootstrap support for F6RJ12 as seed ortholog is 100%.
Bootstrap support for F1NGQ1 as seed ortholog is 100%.

Group of orthologs #2099. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 G.gallus:257

H2XQ42              	100.00%		E1BXI1              	100.00%
                    	       		F1N827              	18.73%
Bootstrap support for H2XQ42 as seed ortholog is 100%.
Bootstrap support for E1BXI1 as seed ortholog is 100%.

Group of orthologs #2100. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 G.gallus:367

F6WS50              	100.00%		E1BTU3              	100.00%
Bootstrap support for F6WS50 as seed ortholog is 100%.
Bootstrap support for E1BTU3 as seed ortholog is 100%.

Group of orthologs #2101. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 G.gallus:367

F6R4Z1              	100.00%		F1NT98              	100.00%
Bootstrap support for F6R4Z1 as seed ortholog is 100%.
Bootstrap support for F1NT98 as seed ortholog is 100%.

Group of orthologs #2102. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 G.gallus:367

H2XWN4              	100.00%		F1NXA0              	100.00%
Bootstrap support for H2XWN4 as seed ortholog is 100%.
Bootstrap support for F1NXA0 as seed ortholog is 100%.

Group of orthologs #2103. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 G.gallus:366

F6YVL2              	100.00%		Q8AXV0              	100.00%
                    	       		Q8AXV1              	49.59%
                    	       		Q8AXU9              	41.69%
Bootstrap support for F6YVL2 as seed ortholog is 100%.
Bootstrap support for Q8AXV0 as seed ortholog is 100%.

Group of orthologs #2104. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 G.gallus:366

F6U019              	100.00%		E1BU61              	100.00%
Bootstrap support for F6U019 as seed ortholog is 100%.
Bootstrap support for E1BU61 as seed ortholog is 100%.

Group of orthologs #2105. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 G.gallus:366

F6T5V5              	100.00%		F1NF94              	100.00%
Bootstrap support for F6T5V5 as seed ortholog is 100%.
Bootstrap support for F1NF94 as seed ortholog is 100%.

Group of orthologs #2106. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 G.gallus:366

F6TLJ7              	100.00%		F1NTC5              	100.00%
Bootstrap support for F6TLJ7 as seed ortholog is 100%.
Bootstrap support for F1NTC5 as seed ortholog is 100%.

Group of orthologs #2107. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 G.gallus:366

F6WNH9              	100.00%		F1NW83              	100.00%
Bootstrap support for F6WNH9 as seed ortholog is 100%.
Bootstrap support for F1NW83 as seed ortholog is 100%.

Group of orthologs #2108. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 G.gallus:366

F6RG39              	100.00%		Q5ZL38              	100.00%
Bootstrap support for F6RG39 as seed ortholog is 100%.
Bootstrap support for Q5ZL38 as seed ortholog is 100%.

Group of orthologs #2109. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 G.gallus:366

H2XYD3              	100.00%		E1C6H0              	100.00%
Bootstrap support for H2XYD3 as seed ortholog is 100%.
Bootstrap support for E1C6H0 as seed ortholog is 100%.

Group of orthologs #2110. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 G.gallus:175

F6ZV29              	100.00%		H9KZA0              	100.00%
Bootstrap support for F6ZV29 as seed ortholog is 99%.
Bootstrap support for H9KZA0 as seed ortholog is 99%.

Group of orthologs #2111. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 G.gallus:366

H2XLD1              	100.00%		F1P3G2              	100.00%
Bootstrap support for H2XLD1 as seed ortholog is 100%.
Bootstrap support for F1P3G2 as seed ortholog is 100%.

Group of orthologs #2112. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:123

H2XWT4              	100.00%		F1NUY2              	100.00%
Bootstrap support for H2XWT4 as seed ortholog is 99%.
Bootstrap support for F1NUY2 as seed ortholog is 99%.

Group of orthologs #2113. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 G.gallus:365

F6SPY1              	100.00%		E1C2A8              	100.00%
Bootstrap support for F6SPY1 as seed ortholog is 100%.
Bootstrap support for E1C2A8 as seed ortholog is 100%.

Group of orthologs #2114. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 G.gallus:364

F6TS32              	100.00%		E1BSJ7              	100.00%
                    	       		P49140              	97.83%
                    	       		F1P0N0              	7.54%
Bootstrap support for F6TS32 as seed ortholog is 100%.
Bootstrap support for E1BSJ7 as seed ortholog is 100%.

Group of orthologs #2115. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 G.gallus:364

F6X1E1              	100.00%		Q6YJI5              	100.00%
                    	       		H9L1B9              	55.06%
Bootstrap support for F6X1E1 as seed ortholog is 100%.
Bootstrap support for Q6YJI5 as seed ortholog is 100%.

Group of orthologs #2116. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 G.gallus:193

F6TVE9              	100.00%		F1NFT7              	100.00%
Bootstrap support for F6TVE9 as seed ortholog is 100%.
Bootstrap support for F1NFT7 as seed ortholog is 99%.

Group of orthologs #2117. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 G.gallus:223

F6WMB2              	100.00%		F1N864              	100.00%
Bootstrap support for F6WMB2 as seed ortholog is 100%.
Bootstrap support for F1N864 as seed ortholog is 100%.

Group of orthologs #2118. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 G.gallus:364

F6SSI8              	100.00%		F1NQI0              	100.00%
Bootstrap support for F6SSI8 as seed ortholog is 100%.
Bootstrap support for F1NQI0 as seed ortholog is 100%.

Group of orthologs #2119. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 G.gallus:364

F6ZRN6              	100.00%		F1N9C5              	100.00%
Bootstrap support for F6ZRN6 as seed ortholog is 100%.
Bootstrap support for F1N9C5 as seed ortholog is 100%.

Group of orthologs #2120. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:364

H2XWF2              	100.00%		E1BRE2              	100.00%
Bootstrap support for H2XWF2 as seed ortholog is 100%.
Bootstrap support for E1BRE2 as seed ortholog is 100%.

Group of orthologs #2121. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 G.gallus:364

H2XX49              	100.00%		E1BSD7              	100.00%
Bootstrap support for H2XX49 as seed ortholog is 100%.
Bootstrap support for E1BSD7 as seed ortholog is 100%.

Group of orthologs #2122. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 G.gallus:45

F6WL19              	100.00%		Q5ZMT0              	100.00%
Bootstrap support for F6WL19 as seed ortholog is 55%.
Alternative seed ortholog is F6TNW3 (5 bits away from this cluster)
Bootstrap support for Q5ZMT0 as seed ortholog is 96%.

Group of orthologs #2123. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 G.gallus:364

H2Y1M1              	100.00%		F1P3H4              	100.00%
Bootstrap support for H2Y1M1 as seed ortholog is 100%.
Bootstrap support for F1P3H4 as seed ortholog is 100%.

Group of orthologs #2124. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 G.gallus:364

H2Y124              	100.00%		Q5ZKJ0              	100.00%
Bootstrap support for H2Y124 as seed ortholog is 89%.
Bootstrap support for Q5ZKJ0 as seed ortholog is 100%.

Group of orthologs #2125. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:264

Q6IMM2              	100.00%		Q6IMM1              	100.00%
Bootstrap support for Q6IMM2 as seed ortholog is 100%.
Bootstrap support for Q6IMM1 as seed ortholog is 100%.

Group of orthologs #2126. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 G.gallus:363

H2XYB1              	100.00%		Q03237              	100.00%
                    	       		P52550              	10.39%
Bootstrap support for H2XYB1 as seed ortholog is 100%.
Bootstrap support for Q03237 as seed ortholog is 100%.

Group of orthologs #2127. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 G.gallus:363

F6YPB3              	100.00%		E1C0E0              	100.00%
Bootstrap support for F6YPB3 as seed ortholog is 100%.
Bootstrap support for E1C0E0 as seed ortholog is 100%.

Group of orthologs #2128. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 G.gallus:363

F6TUR1              	100.00%		F1NK96              	100.00%
Bootstrap support for F6TUR1 as seed ortholog is 100%.
Bootstrap support for F1NK96 as seed ortholog is 100%.

Group of orthologs #2129. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 G.gallus:363

F6QZY3              	100.00%		Q800K9              	100.00%
Bootstrap support for F6QZY3 as seed ortholog is 100%.
Bootstrap support for Q800K9 as seed ortholog is 100%.

Group of orthologs #2130. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:140

H2XL87              	100.00%		F1NNL7              	100.00%
Bootstrap support for H2XL87 as seed ortholog is 100%.
Bootstrap support for F1NNL7 as seed ortholog is 100%.

Group of orthologs #2131. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 G.gallus:363

F6VKM8              	100.00%		Q5ZJF3              	100.00%
Bootstrap support for F6VKM8 as seed ortholog is 100%.
Bootstrap support for Q5ZJF3 as seed ortholog is 100%.

Group of orthologs #2132. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 G.gallus:363

H2XT22              	100.00%		F1NP28              	100.00%
Bootstrap support for H2XT22 as seed ortholog is 100%.
Bootstrap support for F1NP28 as seed ortholog is 100%.

Group of orthologs #2133. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 G.gallus:41

Q4H3W9              	100.00%		F1P4X0              	100.00%
                    	       		E1C698              	44.61%
                    	       		E1C5K7              	40.71%
                    	       		E1C9G2              	34.57%
Bootstrap support for Q4H3W9 as seed ortholog is 100%.
Bootstrap support for F1P4X0 as seed ortholog is 66%.
Alternative seed ortholog is E1C135 (41 bits away from this cluster)

Group of orthologs #2134. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 G.gallus:362

F6U637              	100.00%		E1BTM0              	100.00%
                    	       		F1NIU3              	10.39%
                    	       		F1N8L7              	8.90%
Bootstrap support for F6U637 as seed ortholog is 100%.
Bootstrap support for E1BTM0 as seed ortholog is 100%.

Group of orthologs #2135. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 G.gallus:362

F7AXE7              	100.00%		E1C8S4              	100.00%
                    	       		E1C0U7              	20.39%
Bootstrap support for F7AXE7 as seed ortholog is 100%.
Bootstrap support for E1C8S4 as seed ortholog is 100%.

Group of orthologs #2136. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 G.gallus:160

F6UBJ3              	100.00%		O57429              	100.00%
Bootstrap support for F6UBJ3 as seed ortholog is 99%.
Bootstrap support for O57429 as seed ortholog is 99%.

Group of orthologs #2137. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 G.gallus:85

F6W0H5              	100.00%		H9L1N3              	100.00%
                    	       		H9L2R5              	57.59%
                    	       		H9L1F2              	56.77%
                    	       		H9L2F8              	55.30%
                    	       		H9L1H7              	52.20%
                    	       		H9L1Q8              	44.21%
                    	       		H9L068              	43.07%
                    	       		H9L337              	40.95%
                    	       		F1P5D9              	40.29%
                    	       		H9L1P1              	38.34%
                    	       		H9L020              	38.01%
                    	       		H9L0S9              	31.32%
                    	       		H9L0B4              	28.38%
                    	       		H9L0Z9              	27.41%
                    	       		H9L069              	26.75%
                    	       		H9KZ11              	19.41%
                    	       		F1NL13              	17.29%
                    	       		H9L2W4              	13.70%
                    	       		F1NFZ6              	9.46%
                    	       		H9L0B3              	9.30%
                    	       		F1NNA7              	8.32%
                    	       		F1NXS2              	7.01%
Bootstrap support for F6W0H5 as seed ortholog is 88%.
Bootstrap support for H9L1N3 as seed ortholog is 97%.

Group of orthologs #2138. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 G.gallus:361

F7A0H4              	100.00%		F1N9S5              	100.00%
F6VCE5              	47.12%		
Bootstrap support for F7A0H4 as seed ortholog is 99%.
Bootstrap support for F1N9S5 as seed ortholog is 100%.

Group of orthologs #2139. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 G.gallus:289

F6ZTE1              	100.00%		E1BYR9              	100.00%
Bootstrap support for F6ZTE1 as seed ortholog is 100%.
Bootstrap support for E1BYR9 as seed ortholog is 100%.

Group of orthologs #2140. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 G.gallus:361

F6VKF0              	100.00%		F1P104              	100.00%
Bootstrap support for F6VKF0 as seed ortholog is 100%.
Bootstrap support for F1P104 as seed ortholog is 100%.

Group of orthologs #2141. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 G.gallus:361

H2XX99              	100.00%		E1C951              	100.00%
Bootstrap support for H2XX99 as seed ortholog is 100%.
Bootstrap support for E1C951 as seed ortholog is 100%.

Group of orthologs #2142. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 G.gallus:262

F7AAW0              	100.00%		F1P025              	100.00%
Bootstrap support for F7AAW0 as seed ortholog is 100%.
Bootstrap support for F1P025 as seed ortholog is 100%.

Group of orthologs #2143. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 G.gallus:277

F7BHL8              	100.00%		F1P4H4              	100.00%
Bootstrap support for F7BHL8 as seed ortholog is 100%.
Bootstrap support for F1P4H4 as seed ortholog is 100%.

Group of orthologs #2144. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 G.gallus:360

Q1RPZ3              	100.00%		E1C0U6              	100.00%
                    	       		F1NK48              	46.03%
                    	       		F1NJ84              	14.02%
Bootstrap support for Q1RPZ3 as seed ortholog is 99%.
Bootstrap support for E1C0U6 as seed ortholog is 100%.

Group of orthologs #2145. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 G.gallus:360

A7BK23              	100.00%		F1NMM2              	100.00%
                    	       		E1BZP4              	60.09%
Bootstrap support for A7BK23 as seed ortholog is 100%.
Bootstrap support for F1NMM2 as seed ortholog is 100%.

Group of orthologs #2146. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 G.gallus:360

H2XX76              	100.00%		F1NFM8              	100.00%
                    	       		F1NYE3              	40.74%
Bootstrap support for H2XX76 as seed ortholog is 100%.
Bootstrap support for F1NFM8 as seed ortholog is 100%.

Group of orthologs #2147. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 G.gallus:360

H2XQ34              	100.00%		E1BQW1              	100.00%
Bootstrap support for H2XQ34 as seed ortholog is 100%.
Bootstrap support for E1BQW1 as seed ortholog is 100%.

Group of orthologs #2148. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 G.gallus:195

H2XWJ0              	100.00%		E1BSA0              	100.00%
Bootstrap support for H2XWJ0 as seed ortholog is 100%.
Bootstrap support for E1BSA0 as seed ortholog is 100%.

Group of orthologs #2149. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 G.gallus:360

F6WTW2              	100.00%		F1NNU7              	100.00%
Bootstrap support for F6WTW2 as seed ortholog is 100%.
Bootstrap support for F1NNU7 as seed ortholog is 100%.

Group of orthologs #2150. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 G.gallus:360

Q1RL41              	100.00%		E1BZS7              	100.00%
Bootstrap support for Q1RL41 as seed ortholog is 100%.
Bootstrap support for E1BZS7 as seed ortholog is 100%.

Group of orthologs #2151. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 G.gallus:83

F7AQE7              	100.00%		F1NFU6              	100.00%
                    	       		Q5F3T2              	28.33%
Bootstrap support for F7AQE7 as seed ortholog is 100%.
Bootstrap support for F1NFU6 as seed ortholog is 99%.

Group of orthologs #2152. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:183

F6XCQ7              	100.00%		Q5F3R8              	100.00%
                    	       		Q5ZJN2              	34.67%
Bootstrap support for F6XCQ7 as seed ortholog is 100%.
Bootstrap support for Q5F3R8 as seed ortholog is 100%.

Group of orthologs #2153. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 G.gallus:359

F6R1D0              	100.00%		F1NBJ5              	100.00%
Bootstrap support for F6R1D0 as seed ortholog is 100%.
Bootstrap support for F1NBJ5 as seed ortholog is 100%.

Group of orthologs #2154. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 G.gallus:359

F6TIA8              	100.00%		F1NKT3              	100.00%
Bootstrap support for F6TIA8 as seed ortholog is 100%.
Bootstrap support for F1NKT3 as seed ortholog is 100%.

Group of orthologs #2155. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 G.gallus:359

F6QY42              	100.00%		F1NUY0              	100.00%
Bootstrap support for F6QY42 as seed ortholog is 100%.
Bootstrap support for F1NUY0 as seed ortholog is 100%.

Group of orthologs #2156. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 G.gallus:140

F6XDD9              	100.00%		F1NZJ0              	100.00%
Bootstrap support for F6XDD9 as seed ortholog is 100%.
Bootstrap support for F1NZJ0 as seed ortholog is 99%.

Group of orthologs #2157. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 G.gallus:98

F6SW03              	100.00%		Q5ZK10              	100.00%
Bootstrap support for F6SW03 as seed ortholog is 100%.
Bootstrap support for Q5ZK10 as seed ortholog is 99%.

Group of orthologs #2158. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 G.gallus:359

H2Y0B7              	100.00%		F1NF75              	100.00%
Bootstrap support for H2Y0B7 as seed ortholog is 100%.
Bootstrap support for F1NF75 as seed ortholog is 100%.

Group of orthologs #2159. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 G.gallus:241

Q68A31              	100.00%		F1NXN9              	100.00%
Bootstrap support for Q68A31 as seed ortholog is 100%.
Bootstrap support for F1NXN9 as seed ortholog is 100%.

Group of orthologs #2160. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 G.gallus:294

H2XJY3              	100.00%		F1NAF9              	100.00%
                    	       		F1NG90              	31.87%
                    	       		E1C199              	29.99%
Bootstrap support for H2XJY3 as seed ortholog is 100%.
Bootstrap support for F1NAF9 as seed ortholog is 100%.

Group of orthologs #2161. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 G.gallus:358

F7ARL3              	100.00%		Q7T3T4              	100.00%
                    	       		F1NLG9              	14.77%
                    	       		F1NXR5              	13.64%
Bootstrap support for F7ARL3 as seed ortholog is 100%.
Bootstrap support for Q7T3T4 as seed ortholog is 100%.

Group of orthologs #2162. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 G.gallus:144

H2XWP0              	100.00%		E1C105              	100.00%
                    	       		E1C8J9              	18.31%
Bootstrap support for H2XWP0 as seed ortholog is 100%.
Bootstrap support for E1C105 as seed ortholog is 100%.

Group of orthologs #2163. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 G.gallus:358

F6YH98              	100.00%		Q9W676              	100.00%
                    	       		O42252              	56.69%
Bootstrap support for F6YH98 as seed ortholog is 100%.
Bootstrap support for Q9W676 as seed ortholog is 100%.

Group of orthologs #2164. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 G.gallus:358

F6T065              	100.00%		E1BUU3              	100.00%
Bootstrap support for F6T065 as seed ortholog is 100%.
Bootstrap support for E1BUU3 as seed ortholog is 100%.

Group of orthologs #2165. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 G.gallus:358

F6UM67              	100.00%		F1N894              	100.00%
Bootstrap support for F6UM67 as seed ortholog is 100%.
Bootstrap support for F1N894 as seed ortholog is 100%.

Group of orthologs #2166. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 G.gallus:116

H2XYX4              	100.00%		E1C118              	100.00%
Bootstrap support for H2XYX4 as seed ortholog is 100%.
Bootstrap support for E1C118 as seed ortholog is 99%.

Group of orthologs #2167. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 G.gallus:358

F7AZT4              	100.00%		Q8AWB6              	100.00%
Bootstrap support for F7AZT4 as seed ortholog is 100%.
Bootstrap support for Q8AWB6 as seed ortholog is 100%.

Group of orthologs #2168. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 G.gallus:75

F6PQN7              	100.00%		E1C4D4              	100.00%
Bootstrap support for F6PQN7 as seed ortholog is 100%.
Bootstrap support for E1C4D4 as seed ortholog is 94%.

Group of orthologs #2169. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 G.gallus:357

F6PHT6              	100.00%		F1NXA3              	100.00%
Bootstrap support for F6PHT6 as seed ortholog is 100%.
Bootstrap support for F1NXA3 as seed ortholog is 100%.

Group of orthologs #2170. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:357

H2XWU7              	100.00%		E1C8Z1              	100.00%
Bootstrap support for H2XWU7 as seed ortholog is 100%.
Bootstrap support for E1C8Z1 as seed ortholog is 100%.

Group of orthologs #2171. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 G.gallus:35

H2XQH0              	100.00%		F1NT57              	100.00%
F6ZRC6              	7.69%		F1NT56              	69.03%
                    	       		E1BVD1              	64.52%
                    	       		Q90W83              	40.97%
Bootstrap support for H2XQH0 as seed ortholog is 99%.
Bootstrap support for F1NT57 as seed ortholog is 83%.

Group of orthologs #2172. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:124

F6QTW3              	100.00%		E1BU42              	100.00%
                    	       		F1N9Y5              	41.89%
Bootstrap support for F6QTW3 as seed ortholog is 86%.
Bootstrap support for E1BU42 as seed ortholog is 99%.

Group of orthologs #2173. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 G.gallus:286

H2XK45              	100.00%		F1NKT4              	100.00%
                    	       		P79763              	26.38%
Bootstrap support for H2XK45 as seed ortholog is 100%.
Bootstrap support for F1NKT4 as seed ortholog is 100%.

Group of orthologs #2174. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 G.gallus:264

F6ZGS5              	100.00%		F1NZY9              	100.00%
                    	       		Q5ZHX7              	13.96%
Bootstrap support for F6ZGS5 as seed ortholog is 100%.
Bootstrap support for F1NZY9 as seed ortholog is 100%.

Group of orthologs #2175. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 G.gallus:299

F6PK54              	100.00%		F1NIE8              	100.00%
Bootstrap support for F6PK54 as seed ortholog is 100%.
Bootstrap support for F1NIE8 as seed ortholog is 100%.

Group of orthologs #2176. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 G.gallus:140

F6U922              	100.00%		F1NKS0              	100.00%
Bootstrap support for F6U922 as seed ortholog is 100%.
Bootstrap support for F1NKS0 as seed ortholog is 99%.

Group of orthologs #2177. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 G.gallus:247

F6ZRB6              	100.00%		Q5ZLI2              	100.00%
Bootstrap support for F6ZRB6 as seed ortholog is 100%.
Bootstrap support for Q5ZLI2 as seed ortholog is 100%.

Group of orthologs #2178. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 G.gallus:166

H2Y1B2              	100.00%		Q90965              	100.00%
Bootstrap support for H2Y1B2 as seed ortholog is 100%.
Bootstrap support for Q90965 as seed ortholog is 100%.

Group of orthologs #2179. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 G.gallus:355

F6TXN5              	100.00%		E1BUZ0              	100.00%
Bootstrap support for F6TXN5 as seed ortholog is 100%.
Bootstrap support for E1BUZ0 as seed ortholog is 100%.

Group of orthologs #2180. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 G.gallus:355

F7BGY7              	100.00%		E1C552              	100.00%
Bootstrap support for F7BGY7 as seed ortholog is 100%.
Bootstrap support for E1C552 as seed ortholog is 100%.

Group of orthologs #2181. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 G.gallus:354

F6PMM3              	100.00%		Q5ZMN1              	100.00%
                    	       		E1C769              	40.39%
Bootstrap support for F6PMM3 as seed ortholog is 100%.
Bootstrap support for Q5ZMN1 as seed ortholog is 100%.

Group of orthologs #2182. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 G.gallus:354

H2XTC5              	100.00%		H9L0J4              	100.00%
                    	       		F1NKH2              	82.35%
Bootstrap support for H2XTC5 as seed ortholog is 100%.
Bootstrap support for H9L0J4 as seed ortholog is 100%.

Group of orthologs #2183. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 G.gallus:193

F6ZFI0              	100.00%		E1C116              	100.00%
Bootstrap support for F6ZFI0 as seed ortholog is 100%.
Bootstrap support for E1C116 as seed ortholog is 99%.

Group of orthologs #2184. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 G.gallus:354

F6UJ07              	100.00%		F1NPH1              	100.00%
Bootstrap support for F6UJ07 as seed ortholog is 100%.
Bootstrap support for F1NPH1 as seed ortholog is 100%.

Group of orthologs #2185. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 G.gallus:354

H2XY62              	100.00%		E1C6Q1              	100.00%
Bootstrap support for H2XY62 as seed ortholog is 100%.
Bootstrap support for E1C6Q1 as seed ortholog is 100%.

Group of orthologs #2186. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 G.gallus:353

H2XKC9              	100.00%		E1BYL9              	100.00%
                    	       		F1N9J1              	19.82%
Bootstrap support for H2XKC9 as seed ortholog is 100%.
Bootstrap support for E1BYL9 as seed ortholog is 100%.

Group of orthologs #2187. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 G.gallus:254

F6ZTS6              	100.00%		F1NG10              	100.00%
                    	       		E1C351              	93.87%
Bootstrap support for F6ZTS6 as seed ortholog is 100%.
Bootstrap support for F1NG10 as seed ortholog is 100%.

Group of orthologs #2188. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:71

Q4H308              	100.00%		Q98SN7              	100.00%
                    	       		F1P0L6              	48.28%
Bootstrap support for Q4H308 as seed ortholog is 99%.
Bootstrap support for Q98SN7 as seed ortholog is 95%.

Group of orthologs #2189. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 G.gallus:352

F6V304              	100.00%		Q5ZKU1              	100.00%
                    	       		F1P2V0              	62.78%
Bootstrap support for F6V304 as seed ortholog is 100%.
Bootstrap support for Q5ZKU1 as seed ortholog is 100%.

Group of orthologs #2190. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 G.gallus:15

Q7YT79              	100.00%		F1NE02              	100.00%
                    	       		F1NW78              	14.29%
Bootstrap support for Q7YT79 as seed ortholog is 94%.
Bootstrap support for F1NE02 as seed ortholog is 80%.

Group of orthologs #2191. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 G.gallus:100

F6SS61              	100.00%		F1N8Z6              	100.00%
Bootstrap support for F6SS61 as seed ortholog is 100%.
Bootstrap support for F1N8Z6 as seed ortholog is 99%.

Group of orthologs #2192. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 G.gallus:352

F6PQL4              	100.00%		F1NKN8              	100.00%
Bootstrap support for F6PQL4 as seed ortholog is 100%.
Bootstrap support for F1NKN8 as seed ortholog is 100%.

Group of orthologs #2193. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 G.gallus:163

F6XT60              	100.00%		E1C0F3              	100.00%
Bootstrap support for F6XT60 as seed ortholog is 100%.
Bootstrap support for E1C0F3 as seed ortholog is 100%.

Group of orthologs #2194. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 G.gallus:351

F6PR08              	100.00%		E1BXI5              	100.00%
Bootstrap support for F6PR08 as seed ortholog is 100%.
Bootstrap support for E1BXI5 as seed ortholog is 100%.

Group of orthologs #2195. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 G.gallus:351

F6RID7              	100.00%		P00940              	100.00%
Bootstrap support for F6RID7 as seed ortholog is 100%.
Bootstrap support for P00940 as seed ortholog is 100%.

Group of orthologs #2196. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 G.gallus:74

F6R3W0              	100.00%		Q1KME6              	100.00%
Bootstrap support for F6R3W0 as seed ortholog is 100%.
Bootstrap support for Q1KME6 as seed ortholog is 99%.

Group of orthologs #2197. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 G.gallus:351

Q1RL74              	100.00%		F1NID3              	100.00%
Bootstrap support for Q1RL74 as seed ortholog is 100%.
Bootstrap support for F1NID3 as seed ortholog is 100%.

Group of orthologs #2198. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 G.gallus:250

H2XJH6              	100.00%		Q7T0B1              	100.00%
Bootstrap support for H2XJH6 as seed ortholog is 100%.
Bootstrap support for Q7T0B1 as seed ortholog is 100%.

Group of orthologs #2199. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 G.gallus:351

Q1RLA5              	100.00%		Q98SE2              	100.00%
Bootstrap support for Q1RLA5 as seed ortholog is 100%.
Bootstrap support for Q98SE2 as seed ortholog is 100%.

Group of orthologs #2200. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 G.gallus:209

F6QQA0              	100.00%		E1BTW0              	100.00%
                    	       		E1C480              	36.20%
Bootstrap support for F6QQA0 as seed ortholog is 100%.
Bootstrap support for E1BTW0 as seed ortholog is 100%.

Group of orthologs #2201. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 G.gallus:350

F6QFM3              	100.00%		F1NZ36              	100.00%
                    	       		F1P5H9              	36.76%
Bootstrap support for F6QFM3 as seed ortholog is 100%.
Bootstrap support for F1NZ36 as seed ortholog is 100%.

Group of orthologs #2202. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 G.gallus:350

F6VVB7              	100.00%		P49707              	100.00%
                    	       		F1P3N8              	5.23%
Bootstrap support for F6VVB7 as seed ortholog is 100%.
Bootstrap support for P49707 as seed ortholog is 100%.

Group of orthologs #2203. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 G.gallus:350

F6WRK0              	100.00%		E1BQP0              	100.00%
Bootstrap support for F6WRK0 as seed ortholog is 100%.
Bootstrap support for E1BQP0 as seed ortholog is 100%.

Group of orthologs #2204. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 G.gallus:350

F6WCT6              	100.00%		F1N8T3              	100.00%
Bootstrap support for F6WCT6 as seed ortholog is 100%.
Bootstrap support for F1N8T3 as seed ortholog is 100%.

Group of orthologs #2205. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 G.gallus:350

F6U6Z4              	100.00%		F1NGB1              	100.00%
Bootstrap support for F6U6Z4 as seed ortholog is 100%.
Bootstrap support for F1NGB1 as seed ortholog is 100%.

Group of orthologs #2206. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 G.gallus:350

F6RPW8              	100.00%		F1P5A3              	100.00%
Bootstrap support for F6RPW8 as seed ortholog is 100%.
Bootstrap support for F1P5A3 as seed ortholog is 100%.

Group of orthologs #2207. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 G.gallus:350

F6WSZ0              	100.00%		F1NNL9              	100.00%
Bootstrap support for F6WSZ0 as seed ortholog is 100%.
Bootstrap support for F1NNL9 as seed ortholog is 100%.

Group of orthologs #2208. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 G.gallus:350

F6YCP6              	100.00%		F1NLG8              	100.00%
Bootstrap support for F6YCP6 as seed ortholog is 100%.
Bootstrap support for F1NLG8 as seed ortholog is 100%.

Group of orthologs #2209. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 G.gallus:350

F7BA03              	100.00%		F1NPU2              	100.00%
Bootstrap support for F7BA03 as seed ortholog is 100%.
Bootstrap support for F1NPU2 as seed ortholog is 100%.

Group of orthologs #2210. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 G.gallus:350

F6VHL9              	100.00%		Q5ZJ41              	100.00%
Bootstrap support for F6VHL9 as seed ortholog is 100%.
Bootstrap support for Q5ZJ41 as seed ortholog is 100%.

Group of orthologs #2211. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 G.gallus:350

F6ZCS4              	100.00%		H9L087              	100.00%
Bootstrap support for F6ZCS4 as seed ortholog is 100%.
Bootstrap support for H9L087 as seed ortholog is 100%.

Group of orthologs #2212. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:98

H2XRT9              	100.00%		F1NFQ0              	100.00%
                    	       		E1BYN0              	68.98%
                    	       		F1NGC8              	15.84%
                    	       		F1NFL4              	6.82%
Bootstrap support for H2XRT9 as seed ortholog is 100%.
Bootstrap support for F1NFQ0 as seed ortholog is 95%.

Group of orthologs #2213. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 G.gallus:349

F6X3A0              	100.00%		E1BQJ3              	100.00%
Bootstrap support for F6X3A0 as seed ortholog is 100%.
Bootstrap support for E1BQJ3 as seed ortholog is 100%.

Group of orthologs #2214. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 G.gallus:161

F6UUA2              	100.00%		E1BZJ9              	100.00%
Bootstrap support for F6UUA2 as seed ortholog is 100%.
Bootstrap support for E1BZJ9 as seed ortholog is 99%.

Group of orthologs #2215. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 G.gallus:349

F6Y6W3              	100.00%		F1NGC4              	100.00%
Bootstrap support for F6Y6W3 as seed ortholog is 100%.
Bootstrap support for F1NGC4 as seed ortholog is 100%.

Group of orthologs #2216. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 G.gallus:349

F6WCR1              	100.00%		F1NQT0              	100.00%
Bootstrap support for F6WCR1 as seed ortholog is 100%.
Bootstrap support for F1NQT0 as seed ortholog is 100%.

Group of orthologs #2217. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 G.gallus:349

H2Y1C1              	100.00%		E1BQD2              	100.00%
Bootstrap support for H2Y1C1 as seed ortholog is 100%.
Bootstrap support for E1BQD2 as seed ortholog is 100%.

Group of orthologs #2218. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 G.gallus:36

F7B262              	100.00%		E1C0B3              	100.00%
                    	       		F1NQ62              	34.96%
                    	       		F1NPJ5              	26.48%
                    	       		E1BSH2              	25.55%
                    	       		F1NSG0              	6.18%
Bootstrap support for F7B262 as seed ortholog is 81%.
Bootstrap support for E1C0B3 as seed ortholog is 81%.

Group of orthologs #2219. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 G.gallus:348

F6YCY6              	100.00%		Q5ZHP8              	100.00%
                    	       		F1NRZ7              	96.45%
                    	       		F1P3A8              	9.69%
Bootstrap support for F6YCY6 as seed ortholog is 100%.
Bootstrap support for Q5ZHP8 as seed ortholog is 100%.

Group of orthologs #2220. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 G.gallus:348

F6TQ12              	100.00%		F1NC78              	100.00%
Bootstrap support for F6TQ12 as seed ortholog is 100%.
Bootstrap support for F1NC78 as seed ortholog is 100%.

Group of orthologs #2221. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:348

F6YLQ9              	100.00%		E1BZP0              	100.00%
Bootstrap support for F6YLQ9 as seed ortholog is 100%.
Bootstrap support for E1BZP0 as seed ortholog is 100%.

Group of orthologs #2222. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 G.gallus:348

F6THX7              	100.00%		F1NFA8              	100.00%
Bootstrap support for F6THX7 as seed ortholog is 100%.
Bootstrap support for F1NFA8 as seed ortholog is 100%.

Group of orthologs #2223. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 G.gallus:348

F6XMX2              	100.00%		E1C4I3              	100.00%
Bootstrap support for F6XMX2 as seed ortholog is 100%.
Bootstrap support for E1C4I3 as seed ortholog is 100%.

Group of orthologs #2224. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 G.gallus:348

F6WF51              	100.00%		F1NKZ9              	100.00%
Bootstrap support for F6WF51 as seed ortholog is 100%.
Bootstrap support for F1NKZ9 as seed ortholog is 100%.

Group of orthologs #2225. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 G.gallus:348

H2XVS8              	100.00%		F1NGU0              	100.00%
Bootstrap support for H2XVS8 as seed ortholog is 100%.
Bootstrap support for F1NGU0 as seed ortholog is 100%.

Group of orthologs #2226. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 G.gallus:348

I6L7H7              	100.00%		F1NFG8              	100.00%
Bootstrap support for I6L7H7 as seed ortholog is 100%.
Bootstrap support for F1NFG8 as seed ortholog is 100%.

Group of orthologs #2227. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 G.gallus:347

F6PN41              	100.00%		F1NT28              	100.00%
                    	       		E1C6X1              	35.97%
Bootstrap support for F6PN41 as seed ortholog is 100%.
Bootstrap support for F1NT28 as seed ortholog is 100%.

Group of orthologs #2228. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 G.gallus:347

F6Y978              	100.00%		Q5W4S4              	100.00%
                    	       		F1NVA7              	30.16%
Bootstrap support for F6Y978 as seed ortholog is 100%.
Bootstrap support for Q5W4S4 as seed ortholog is 100%.

Group of orthologs #2229. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 G.gallus:347

H2XX92              	100.00%		Q5ZKW0              	100.00%
                    	       		H9KZX8              	49.91%
Bootstrap support for H2XX92 as seed ortholog is 100%.
Bootstrap support for Q5ZKW0 as seed ortholog is 100%.

Group of orthologs #2230. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 G.gallus:179

F6RCT7              	100.00%		E1BUM0              	100.00%
Bootstrap support for F6RCT7 as seed ortholog is 99%.
Bootstrap support for E1BUM0 as seed ortholog is 100%.

Group of orthologs #2231. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 G.gallus:347

F6ZII8              	100.00%		E1BT83              	100.00%
Bootstrap support for F6ZII8 as seed ortholog is 100%.
Bootstrap support for E1BT83 as seed ortholog is 100%.

Group of orthologs #2232. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 G.gallus:347

H2XL54              	100.00%		E1BST6              	100.00%
Bootstrap support for H2XL54 as seed ortholog is 100%.
Bootstrap support for E1BST6 as seed ortholog is 100%.

Group of orthologs #2233. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 G.gallus:347

F7A328              	100.00%		E1C7G0              	100.00%
Bootstrap support for F7A328 as seed ortholog is 100%.
Bootstrap support for E1C7G0 as seed ortholog is 100%.

Group of orthologs #2234. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 G.gallus:347

F6RVB8              	100.00%		F1P1F7              	100.00%
Bootstrap support for F6RVB8 as seed ortholog is 100%.
Bootstrap support for F1P1F7 as seed ortholog is 100%.

Group of orthologs #2235. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 G.gallus:347

F6Z015              	100.00%		H9L001              	100.00%
Bootstrap support for F6Z015 as seed ortholog is 75%.
Bootstrap support for H9L001 as seed ortholog is 100%.

Group of orthologs #2236. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 G.gallus:347

F7AWQ7              	100.00%		F1P2D4              	100.00%
Bootstrap support for F7AWQ7 as seed ortholog is 100%.
Bootstrap support for F1P2D4 as seed ortholog is 100%.

Group of orthologs #2237. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 G.gallus:347

H2XUL1              	100.00%		F1NVX4              	100.00%
Bootstrap support for H2XUL1 as seed ortholog is 100%.
Bootstrap support for F1NVX4 as seed ortholog is 100%.

Group of orthologs #2238. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 G.gallus:126

F6VUH2              	100.00%		F1NFY1              	100.00%
                    	       		Q5ZLY3              	23.14%
                    	       		E1BT74              	17.63%
Bootstrap support for F6VUH2 as seed ortholog is 100%.
Bootstrap support for F1NFY1 as seed ortholog is 100%.

Group of orthologs #2239. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 G.gallus:346

F6QIP6              	100.00%		P53412              	100.00%
                    	       		H9L2C7              	12.74%
Bootstrap support for F6QIP6 as seed ortholog is 100%.
Bootstrap support for P53412 as seed ortholog is 100%.

Group of orthologs #2240. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 G.gallus:234

F6PH64              	100.00%		E1BUI4              	100.00%
Bootstrap support for F6PH64 as seed ortholog is 99%.
Bootstrap support for E1BUI4 as seed ortholog is 99%.

Group of orthologs #2241. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 G.gallus:181

F7A5H4              	100.00%		E1C7C7              	100.00%
Bootstrap support for F7A5H4 as seed ortholog is 100%.
Bootstrap support for E1C7C7 as seed ortholog is 100%.

Group of orthologs #2242. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 G.gallus:175

F6WK17              	100.00%		F1NIK1              	100.00%
Bootstrap support for F6WK17 as seed ortholog is 100%.
Bootstrap support for F1NIK1 as seed ortholog is 99%.

Group of orthologs #2243. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 G.gallus:346

F6VG38              	100.00%		F1NYK1              	100.00%
Bootstrap support for F6VG38 as seed ortholog is 100%.
Bootstrap support for F1NYK1 as seed ortholog is 100%.

Group of orthologs #2244. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 G.gallus:241

F7A4V3              	100.00%		F1NVX8              	100.00%
Bootstrap support for F7A4V3 as seed ortholog is 100%.
Bootstrap support for F1NVX8 as seed ortholog is 100%.

Group of orthologs #2245. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 G.gallus:145

F6ZZG0              	100.00%		F1NYM7              	100.00%
Bootstrap support for F6ZZG0 as seed ortholog is 100%.
Bootstrap support for F1NYM7 as seed ortholog is 99%.

Group of orthologs #2246. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 G.gallus:346

H2XM46              	100.00%		F1NRU5              	100.00%
Bootstrap support for H2XM46 as seed ortholog is 100%.
Bootstrap support for F1NRU5 as seed ortholog is 100%.

Group of orthologs #2247. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 G.gallus:179

F6ZFM9              	100.00%		F1NMJ3              	100.00%
                    	       		E1C1K7              	35.29%
                    	       		F1NDW2              	21.39%
Bootstrap support for F6ZFM9 as seed ortholog is 100%.
Bootstrap support for F1NMJ3 as seed ortholog is 99%.

Group of orthologs #2248. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:345

F6PHI7              	100.00%		E1BZL6              	100.00%
Bootstrap support for F6PHI7 as seed ortholog is 99%.
Bootstrap support for E1BZL6 as seed ortholog is 100%.

Group of orthologs #2249. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 G.gallus:234

F6UEE4              	100.00%		E1BXK5              	100.00%
Bootstrap support for F6UEE4 as seed ortholog is 100%.
Bootstrap support for E1BXK5 as seed ortholog is 99%.

Group of orthologs #2250. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 G.gallus:345

F7BFF4              	100.00%		E1C8I4              	100.00%
Bootstrap support for F7BFF4 as seed ortholog is 100%.
Bootstrap support for E1C8I4 as seed ortholog is 100%.

Group of orthologs #2251. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 G.gallus:299

F7ART8              	100.00%		F1ND84              	100.00%
Bootstrap support for F7ART8 as seed ortholog is 100%.
Bootstrap support for F1ND84 as seed ortholog is 100%.

Group of orthologs #2252. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 G.gallus:345

F7BFD3              	100.00%		F1P559              	100.00%
Bootstrap support for F7BFD3 as seed ortholog is 100%.
Bootstrap support for F1P559 as seed ortholog is 100%.

Group of orthologs #2253. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 G.gallus:344

F6T886              	100.00%		E1BSH9              	100.00%
F7AUB9              	45.58%		
F7BDU0              	22.09%		
Bootstrap support for F6T886 as seed ortholog is 100%.
Bootstrap support for E1BSH9 as seed ortholog is 100%.

Group of orthologs #2254. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 G.gallus:76

F6ZXN6              	100.00%		P09654              	100.00%
                    	       		P02542              	36.63%
                    	       		F1NE70              	28.57%
Bootstrap support for F6ZXN6 as seed ortholog is 92%.
Bootstrap support for P09654 as seed ortholog is 96%.

Group of orthologs #2255. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 G.gallus:36

F6V597              	100.00%		F1NU59              	100.00%
                    	       		E1BQY6              	21.01%
Bootstrap support for F6V597 as seed ortholog is 99%.
Bootstrap support for F1NU59 as seed ortholog is 82%.

Group of orthologs #2256. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 G.gallus:170

L7N0U6              	100.00%		F1NG68              	100.00%
F6PS78              	98.78%		
Bootstrap support for L7N0U6 as seed ortholog is 100%.
Bootstrap support for F1NG68 as seed ortholog is 100%.

Group of orthologs #2257. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 G.gallus:344

F6TWS7              	100.00%		E1BXX0              	100.00%
Bootstrap support for F6TWS7 as seed ortholog is 100%.
Bootstrap support for E1BXX0 as seed ortholog is 100%.

Group of orthologs #2258. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 G.gallus:174

F6RJT7              	100.00%		F1NDK1              	100.00%
Bootstrap support for F6RJT7 as seed ortholog is 100%.
Bootstrap support for F1NDK1 as seed ortholog is 100%.

Group of orthologs #2259. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 G.gallus:344

F6UKV2              	100.00%		E1C893              	100.00%
Bootstrap support for F6UKV2 as seed ortholog is 100%.
Bootstrap support for E1C893 as seed ortholog is 100%.

Group of orthologs #2260. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 G.gallus:344

F6UP66              	100.00%		F1N834              	100.00%
Bootstrap support for F6UP66 as seed ortholog is 100%.
Bootstrap support for F1N834 as seed ortholog is 100%.

Group of orthologs #2261. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 G.gallus:344

F6Z2W9              	100.00%		F1NKY1              	100.00%
Bootstrap support for F6Z2W9 as seed ortholog is 100%.
Bootstrap support for F1NKY1 as seed ortholog is 100%.

Group of orthologs #2262. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 G.gallus:344

H2Y079              	100.00%		F1N9V0              	100.00%
Bootstrap support for H2Y079 as seed ortholog is 100%.
Bootstrap support for F1N9V0 as seed ortholog is 100%.

Group of orthologs #2263. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 G.gallus:344

F7ATI9              	100.00%		P23913              	100.00%
Bootstrap support for F7ATI9 as seed ortholog is 100%.
Bootstrap support for P23913 as seed ortholog is 100%.

Group of orthologs #2264. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 G.gallus:343

F7AZQ8              	100.00%		E1BYQ5              	100.00%
                    	       		F1P1A4              	47.66%
                    	       		E1C3B9              	42.37%
Bootstrap support for F7AZQ8 as seed ortholog is 100%.
Bootstrap support for E1BYQ5 as seed ortholog is 100%.

Group of orthologs #2265. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 G.gallus:343

F6QWP6              	100.00%		F1NQZ5              	100.00%
                    	       		E1C4K8              	46.29%
Bootstrap support for F6QWP6 as seed ortholog is 100%.
Bootstrap support for F1NQZ5 as seed ortholog is 100%.

Group of orthologs #2266. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 G.gallus:137

F6U7K8              	100.00%		F1P3V0              	100.00%
                    	       		Q98949              	15.24%
Bootstrap support for F6U7K8 as seed ortholog is 99%.
Bootstrap support for F1P3V0 as seed ortholog is 99%.

Group of orthologs #2267. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 G.gallus:343

F6S4C0              	100.00%		E1BU55              	100.00%
Bootstrap support for F6S4C0 as seed ortholog is 100%.
Bootstrap support for E1BU55 as seed ortholog is 100%.

Group of orthologs #2268. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 G.gallus:205

F6Z491              	100.00%		H9KYP7              	100.00%
Bootstrap support for F6Z491 as seed ortholog is 100%.
Bootstrap support for H9KYP7 as seed ortholog is 100%.

Group of orthologs #2269. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 G.gallus:343

F7A1H6              	100.00%		F1P4W7              	100.00%
Bootstrap support for F7A1H6 as seed ortholog is 100%.
Bootstrap support for F1P4W7 as seed ortholog is 100%.

Group of orthologs #2270. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 G.gallus:61

F6W2M8              	100.00%		Q5ZLN1              	100.00%
Bootstrap support for F6W2M8 as seed ortholog is 100%.
Bootstrap support for Q5ZLN1 as seed ortholog is 98%.

Group of orthologs #2271. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 G.gallus:143

F6S3S9              	100.00%		E1BVC8              	100.00%
                    	       		F1NV32              	8.10%
Bootstrap support for F6S3S9 as seed ortholog is 100%.
Bootstrap support for E1BVC8 as seed ortholog is 99%.

Group of orthologs #2272. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:24

Q7YT82              	100.00%		F1NLM4              	100.00%
                    	       		Q9PSX7              	48.65%
Bootstrap support for Q7YT82 as seed ortholog is 100%.
Bootstrap support for F1NLM4 as seed ortholog is 90%.

Group of orthologs #2273. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 G.gallus:342

F6R035              	100.00%		E1BQQ5              	100.00%
Bootstrap support for F6R035 as seed ortholog is 100%.
Bootstrap support for E1BQQ5 as seed ortholog is 100%.

Group of orthologs #2274. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 G.gallus:342

F6VH72              	100.00%		E1C0W2              	100.00%
Bootstrap support for F6VH72 as seed ortholog is 100%.
Bootstrap support for E1C0W2 as seed ortholog is 100%.

Group of orthologs #2275. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 G.gallus:342

F6XNV2              	100.00%		E1C2E5              	100.00%
Bootstrap support for F6XNV2 as seed ortholog is 100%.
Bootstrap support for E1C2E5 as seed ortholog is 100%.

Group of orthologs #2276. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 G.gallus:342

F7B5Q2              	100.00%		F1NBR7              	100.00%
Bootstrap support for F7B5Q2 as seed ortholog is 100%.
Bootstrap support for F1NBR7 as seed ortholog is 100%.

Group of orthologs #2277. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 G.gallus:300

F6WFK7              	100.00%		F1P331              	100.00%
Bootstrap support for F6WFK7 as seed ortholog is 100%.
Bootstrap support for F1P331 as seed ortholog is 100%.

Group of orthologs #2278. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 G.gallus:99

F6WKA4              	100.00%		F1P4W5              	100.00%
Bootstrap support for F6WKA4 as seed ortholog is 99%.
Bootstrap support for F1P4W5 as seed ortholog is 98%.

Group of orthologs #2279. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 G.gallus:209

F6Z1B8              	100.00%		F1P4I0              	100.00%
Bootstrap support for F6Z1B8 as seed ortholog is 100%.
Bootstrap support for F1P4I0 as seed ortholog is 100%.

Group of orthologs #2280. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 G.gallus:342

F6ZZP5              	100.00%		F2Z4L4              	100.00%
Bootstrap support for F6ZZP5 as seed ortholog is 100%.
Bootstrap support for F2Z4L4 as seed ortholog is 100%.

Group of orthologs #2281. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:72

F6YI37              	100.00%		E1BW20              	100.00%
F6ST69              	18.83%		F1NXB6              	6.40%
Bootstrap support for F6YI37 as seed ortholog is 99%.
Bootstrap support for E1BW20 as seed ortholog is 97%.

Group of orthologs #2282. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 G.gallus:341

F6PHM0              	100.00%		E1BZF1              	100.00%
                    	       		F1NH67              	10.68%
Bootstrap support for F6PHM0 as seed ortholog is 100%.
Bootstrap support for E1BZF1 as seed ortholog is 100%.

Group of orthologs #2283. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 G.gallus:341

F6PWD4              	100.00%		F1NVY3              	100.00%
                    	       		F1N9L9              	25.87%
Bootstrap support for F6PWD4 as seed ortholog is 100%.
Bootstrap support for F1NVY3 as seed ortholog is 100%.

Group of orthologs #2284. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 G.gallus:137

F7BFT5              	100.00%		E1C298              	100.00%
                    	       		E1C5M2              	100.00%
Bootstrap support for F7BFT5 as seed ortholog is 99%.
Bootstrap support for E1C298 as seed ortholog is 99%.
Bootstrap support for E1C5M2 as seed ortholog is 99%.

Group of orthologs #2285. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 G.gallus:89

H2XW45              	100.00%		Q5ZKQ8              	100.00%
                    	       		F1P0Z7              	39.47%
Bootstrap support for H2XW45 as seed ortholog is 100%.
Bootstrap support for Q5ZKQ8 as seed ortholog is 100%.

Group of orthologs #2286. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 G.gallus:341

F6TCH6              	100.00%		F1N9W3              	100.00%
Bootstrap support for F6TCH6 as seed ortholog is 100%.
Bootstrap support for F1N9W3 as seed ortholog is 100%.

Group of orthologs #2287. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 G.gallus:341

F6Y886              	100.00%		F1N9Z2              	100.00%
Bootstrap support for F6Y886 as seed ortholog is 100%.
Bootstrap support for F1N9Z2 as seed ortholog is 100%.

Group of orthologs #2288. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 G.gallus:49

F7AVB6              	100.00%		F1N964              	100.00%
Bootstrap support for F7AVB6 as seed ortholog is 100%.
Bootstrap support for F1N964 as seed ortholog is 84%.

Group of orthologs #2289. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 G.gallus:109

F6X3R5              	100.00%		F1NQF6              	100.00%
Bootstrap support for F6X3R5 as seed ortholog is 100%.
Bootstrap support for F1NQF6 as seed ortholog is 98%.

Group of orthologs #2290. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 G.gallus:341

F6QGV6              	100.00%		Q5ZIH3              	100.00%
Bootstrap support for F6QGV6 as seed ortholog is 100%.
Bootstrap support for Q5ZIH3 as seed ortholog is 100%.

Group of orthologs #2291. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 G.gallus:341

H2XL44              	100.00%		F1NTB0              	100.00%
Bootstrap support for H2XL44 as seed ortholog is 100%.
Bootstrap support for F1NTB0 as seed ortholog is 100%.

Group of orthologs #2292. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 G.gallus:341

F7AZS2              	100.00%		F1P230              	100.00%
Bootstrap support for F7AZS2 as seed ortholog is 100%.
Bootstrap support for F1P230 as seed ortholog is 100%.

Group of orthologs #2293. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 G.gallus:340

F6XFA8              	100.00%		Q5ZIW7              	100.00%
                    	       		Q6PZ02              	21.51%
Bootstrap support for F6XFA8 as seed ortholog is 100%.
Bootstrap support for Q5ZIW7 as seed ortholog is 100%.

Group of orthologs #2294. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 G.gallus:340

F6PM63              	100.00%		E1BT00              	100.00%
Bootstrap support for F6PM63 as seed ortholog is 100%.
Bootstrap support for E1BT00 as seed ortholog is 100%.

Group of orthologs #2295. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 G.gallus:65

F6UJB5              	100.00%		E1BWX3              	100.00%
Bootstrap support for F6UJB5 as seed ortholog is 100%.
Bootstrap support for E1BWX3 as seed ortholog is 98%.

Group of orthologs #2296. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 G.gallus:222

F6XF88              	100.00%		F1NRA1              	100.00%
Bootstrap support for F6XF88 as seed ortholog is 100%.
Bootstrap support for F1NRA1 as seed ortholog is 100%.

Group of orthologs #2297. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 G.gallus:340

F6YAG6              	100.00%		Q5ZMM3              	100.00%
Bootstrap support for F6YAG6 as seed ortholog is 100%.
Bootstrap support for Q5ZMM3 as seed ortholog is 100%.

Group of orthologs #2298. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 G.gallus:339

F7A160              	100.00%		F1NHQ3              	100.00%
                    	       		F1NRX7              	7.44%
Bootstrap support for F7A160 as seed ortholog is 100%.
Bootstrap support for F1NHQ3 as seed ortholog is 100%.

Group of orthologs #2299. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 G.gallus:339

H2Y2N2              	100.00%		E1BRS3              	100.00%
                    	       		E1BUJ2              	28.41%
Bootstrap support for H2Y2N2 as seed ortholog is 100%.
Bootstrap support for E1BRS3 as seed ortholog is 100%.

Group of orthologs #2300. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 G.gallus:55

F6UNA3              	100.00%		Q5F362              	100.00%
F6QH95              	13.32%		
Bootstrap support for F6UNA3 as seed ortholog is 100%.
Bootstrap support for Q5F362 as seed ortholog is 90%.

Group of orthologs #2301. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:268

F6W4G9              	100.00%		Q800W4              	100.00%
                    	       		F1NS94              	61.09%
Bootstrap support for F6W4G9 as seed ortholog is 100%.
Bootstrap support for Q800W4 as seed ortholog is 100%.

Group of orthologs #2302. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 G.gallus:339

F6S593              	100.00%		E1BWV5              	100.00%
Bootstrap support for F6S593 as seed ortholog is 100%.
Bootstrap support for E1BWV5 as seed ortholog is 100%.

Group of orthologs #2303. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 G.gallus:339

F6T310              	100.00%		F1NGR5              	100.00%
Bootstrap support for F6T310 as seed ortholog is 99%.
Bootstrap support for F1NGR5 as seed ortholog is 100%.

Group of orthologs #2304. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 G.gallus:339

H2XZ35              	100.00%		E1C5I8              	100.00%
Bootstrap support for H2XZ35 as seed ortholog is 100%.
Bootstrap support for E1C5I8 as seed ortholog is 100%.

Group of orthologs #2305. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 G.gallus:241

F6ZCT8              	100.00%		F1P0K8              	100.00%
Bootstrap support for F6ZCT8 as seed ortholog is 99%.
Bootstrap support for F1P0K8 as seed ortholog is 100%.

Group of orthologs #2306. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 G.gallus:159

F7AMZ2              	100.00%		F1P5K3              	100.00%
Bootstrap support for F7AMZ2 as seed ortholog is 94%.
Bootstrap support for F1P5K3 as seed ortholog is 99%.

Group of orthologs #2307. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 G.gallus:338

F6TAV4              	100.00%		E1C804              	100.00%
                    	       		F1P3G8              	24.93%
Bootstrap support for F6TAV4 as seed ortholog is 100%.
Bootstrap support for E1C804 as seed ortholog is 100%.

Group of orthologs #2308. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 G.gallus:271

F6ZRE8              	100.00%		E1C5U4              	100.00%
                    	       		E1C2M3              	52.81%
Bootstrap support for F6ZRE8 as seed ortholog is 100%.
Bootstrap support for E1C5U4 as seed ortholog is 100%.

Group of orthologs #2309. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 G.gallus:245

F6UMH6              	100.00%		F1NN38              	100.00%
Bootstrap support for F6UMH6 as seed ortholog is 100%.
Bootstrap support for F1NN38 as seed ortholog is 100%.

Group of orthologs #2310. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 G.gallus:179

F6WQV1              	100.00%		F1NIU7              	100.00%
Bootstrap support for F6WQV1 as seed ortholog is 99%.
Bootstrap support for F1NIU7 as seed ortholog is 99%.

Group of orthologs #2311. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 G.gallus:217

F7BF76              	100.00%		F1NTY3              	100.00%
Bootstrap support for F7BF76 as seed ortholog is 100%.
Bootstrap support for F1NTY3 as seed ortholog is 100%.

Group of orthologs #2312. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 G.gallus:337

F6X3P0              	100.00%		F1N9J0              	100.00%
                    	       		E1BZ99              	16.54%
Bootstrap support for F6X3P0 as seed ortholog is 100%.
Bootstrap support for F1N9J0 as seed ortholog is 100%.

Group of orthologs #2313. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 G.gallus:337

H2XK39              	100.00%		E1C7R3              	100.00%
                    	       		F1NCU3              	20.75%
Bootstrap support for H2XK39 as seed ortholog is 100%.
Bootstrap support for E1C7R3 as seed ortholog is 100%.

Group of orthologs #2314. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 G.gallus:337

F6VVA7              	100.00%		O42406              	100.00%
                    	       		O93307              	27.10%
Bootstrap support for F6VVA7 as seed ortholog is 99%.
Bootstrap support for O42406 as seed ortholog is 100%.

Group of orthologs #2315. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:337

F6UVY6              	100.00%		E1C479              	100.00%
Bootstrap support for F6UVY6 as seed ortholog is 100%.
Bootstrap support for E1C479 as seed ortholog is 100%.

Group of orthologs #2316. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:151

F6ZPY9              	100.00%		F1N9C4              	100.00%
Bootstrap support for F6ZPY9 as seed ortholog is 99%.
Bootstrap support for F1N9C4 as seed ortholog is 99%.

Group of orthologs #2317. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 G.gallus:337

F6ZF50              	100.00%		F1NAR3              	100.00%
Bootstrap support for F6ZF50 as seed ortholog is 100%.
Bootstrap support for F1NAR3 as seed ortholog is 100%.

Group of orthologs #2318. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 G.gallus:337

H2XRN4              	100.00%		F1NDV8              	100.00%
Bootstrap support for H2XRN4 as seed ortholog is 100%.
Bootstrap support for F1NDV8 as seed ortholog is 100%.

Group of orthologs #2319. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 G.gallus:337

Q5VJS0              	100.00%		F1NVD5              	100.00%
Bootstrap support for Q5VJS0 as seed ortholog is 100%.
Bootstrap support for F1NVD5 as seed ortholog is 100%.

Group of orthologs #2320. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 G.gallus:336

F6STW3              	100.00%		E1BY83              	100.00%
                    	       		F1N885              	28.11%
Bootstrap support for F6STW3 as seed ortholog is 100%.
Bootstrap support for E1BY83 as seed ortholog is 100%.

Group of orthologs #2321. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 G.gallus:336

F7A9D9              	100.00%		F1NCH7              	100.00%
                    	       		E1BX86              	23.70%
Bootstrap support for F7A9D9 as seed ortholog is 100%.
Bootstrap support for F1NCH7 as seed ortholog is 100%.

Group of orthologs #2322. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:160

F6TGU6              	100.00%		O13016              	100.00%
                    	       		F1NYW0              	25.04%
Bootstrap support for F6TGU6 as seed ortholog is 99%.
Bootstrap support for O13016 as seed ortholog is 99%.

Group of orthologs #2323. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 G.gallus:66

F6Y1X1              	100.00%		E1BRR6              	100.00%
Bootstrap support for F6Y1X1 as seed ortholog is 100%.
Bootstrap support for E1BRR6 as seed ortholog is 95%.

Group of orthologs #2324. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 G.gallus:235

F6QEE3              	100.00%		F1NJB4              	100.00%
Bootstrap support for F6QEE3 as seed ortholog is 100%.
Bootstrap support for F1NJB4 as seed ortholog is 100%.

Group of orthologs #2325. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 G.gallus:278

F6YAA4              	100.00%		F1NGS9              	100.00%
Bootstrap support for F6YAA4 as seed ortholog is 100%.
Bootstrap support for F1NGS9 as seed ortholog is 100%.

Group of orthologs #2326. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 G.gallus:336

F6RZ52              	100.00%		F1P5X8              	100.00%
Bootstrap support for F6RZ52 as seed ortholog is 100%.
Bootstrap support for F1P5X8 as seed ortholog is 100%.

Group of orthologs #2327. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 G.gallus:336

F7BKA5              	100.00%		F1NG30              	100.00%
Bootstrap support for F7BKA5 as seed ortholog is 100%.
Bootstrap support for F1NG30 as seed ortholog is 100%.

Group of orthologs #2328. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 G.gallus:336

H2XY13              	100.00%		F1NG67              	100.00%
Bootstrap support for H2XY13 as seed ortholog is 100%.
Bootstrap support for F1NG67 as seed ortholog is 100%.

Group of orthologs #2329. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 G.gallus:336

F6YX11              	100.00%		P0CF65              	100.00%
Bootstrap support for F6YX11 as seed ortholog is 100%.
Bootstrap support for P0CF65 as seed ortholog is 100%.

Group of orthologs #2330. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 G.gallus:197

F6Q0N1              	100.00%		F1P3R9              	100.00%
                    	       		P15062              	100.00%
                    	       		P10157              	17.76%
Bootstrap support for F6Q0N1 as seed ortholog is 99%.
Bootstrap support for F1P3R9 as seed ortholog is 100%.
Bootstrap support for P15062 as seed ortholog is 100%.

Group of orthologs #2331. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 G.gallus:151

F6S925              	100.00%		H9KZD8              	100.00%
F6S909              	8.40%		E1C4X9              	42.30%
Bootstrap support for F6S925 as seed ortholog is 47%.
Alternative seed ortholog is Q4H396 (1 bits away from this cluster)
Bootstrap support for H9KZD8 as seed ortholog is 99%.

Group of orthologs #2332. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 G.gallus:335

F6YGM8              	100.00%		F1P0Y4              	100.00%
                    	       		F1NW30              	17.98%
Bootstrap support for F6YGM8 as seed ortholog is 100%.
Bootstrap support for F1P0Y4 as seed ortholog is 100%.

Group of orthologs #2333. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 G.gallus:198

Q1RLB1              	100.00%		E1C2Y2              	100.00%
                    	       		E1BSQ2              	20.99%
Bootstrap support for Q1RLB1 as seed ortholog is 100%.
Bootstrap support for E1C2Y2 as seed ortholog is 99%.

Group of orthologs #2334. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 G.gallus:258

F6Z541              	100.00%		E1C8T0              	100.00%
Bootstrap support for F6Z541 as seed ortholog is 100%.
Bootstrap support for E1C8T0 as seed ortholog is 100%.

Group of orthologs #2335. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 G.gallus:197

F6VHJ0              	100.00%		F1NUE4              	100.00%
Bootstrap support for F6VHJ0 as seed ortholog is 100%.
Bootstrap support for F1NUE4 as seed ortholog is 100%.

Group of orthologs #2336. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 G.gallus:264

F6PWM6              	100.00%		Q5ZML9              	100.00%
Bootstrap support for F6PWM6 as seed ortholog is 100%.
Bootstrap support for Q5ZML9 as seed ortholog is 100%.

Group of orthologs #2337. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 G.gallus:335

F7AS27              	100.00%		F1NQW1              	100.00%
Bootstrap support for F7AS27 as seed ortholog is 100%.
Bootstrap support for F1NQW1 as seed ortholog is 100%.

Group of orthologs #2338. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 G.gallus:335

F6V9C5              	100.00%		Q8UW76              	100.00%
Bootstrap support for F6V9C5 as seed ortholog is 99%.
Bootstrap support for Q8UW76 as seed ortholog is 100%.

Group of orthologs #2339. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:21

F7ARV5              	100.00%		F1NA68              	100.00%
                    	       		P13863              	18.24%
Bootstrap support for F7ARV5 as seed ortholog is 99%.
Bootstrap support for F1NA68 as seed ortholog is 74%.
Alternative seed ortholog is F1P1K1 (21 bits away from this cluster)

Group of orthologs #2340. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 G.gallus:176

F6W9C9              	100.00%		P28497              	100.00%
                    	       		P13127              	74.80%
Bootstrap support for F6W9C9 as seed ortholog is 100%.
Bootstrap support for P28497 as seed ortholog is 100%.

Group of orthologs #2341. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 G.gallus:334

F6S578              	100.00%		F1NU71              	100.00%
Bootstrap support for F6S578 as seed ortholog is 100%.
Bootstrap support for F1NU71 as seed ortholog is 100%.

Group of orthologs #2342. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 G.gallus:56

F6QBH7              	100.00%		F1P186              	100.00%
Bootstrap support for F6QBH7 as seed ortholog is 100%.
Bootstrap support for F1P186 as seed ortholog is 93%.

Group of orthologs #2343. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 G.gallus:334

F6XRP8              	100.00%		F1NTH9              	100.00%
Bootstrap support for F6XRP8 as seed ortholog is 100%.
Bootstrap support for F1NTH9 as seed ortholog is 100%.

Group of orthologs #2344. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 G.gallus:175

H2XY76              	100.00%		E1C8H0              	100.00%
Bootstrap support for H2XY76 as seed ortholog is 100%.
Bootstrap support for E1C8H0 as seed ortholog is 100%.

Group of orthologs #2345. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 G.gallus:85

F6Y7E9              	100.00%		Q5ZJ56              	100.00%
Bootstrap support for F6Y7E9 as seed ortholog is 100%.
Bootstrap support for Q5ZJ56 as seed ortholog is 99%.

Group of orthologs #2346. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 G.gallus:239

H2XLP9              	100.00%		F1NEL3              	100.00%
                    	       		E1C2F8              	25.93%
                    	       		F1NKM7              	22.48%
Bootstrap support for H2XLP9 as seed ortholog is 100%.
Bootstrap support for F1NEL3 as seed ortholog is 100%.

Group of orthologs #2347. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 G.gallus:140

F6WF86              	100.00%		Q90999              	100.00%
                    	       		E1BQF4              	33.21%
Bootstrap support for F6WF86 as seed ortholog is 99%.
Bootstrap support for Q90999 as seed ortholog is 99%.

Group of orthologs #2348. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 G.gallus:333

K9J6P5              	100.00%		Q5ZKV4              	100.00%
F7AYD9              	58.29%		
Bootstrap support for K9J6P5 as seed ortholog is 100%.
Bootstrap support for Q5ZKV4 as seed ortholog is 100%.

Group of orthologs #2349. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 G.gallus:333

F7AWS8              	100.00%		E1BV92              	100.00%
Bootstrap support for F7AWS8 as seed ortholog is 100%.
Bootstrap support for E1BV92 as seed ortholog is 100%.

Group of orthologs #2350. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 G.gallus:333

F6QHP8              	100.00%		P08836              	100.00%
Bootstrap support for F6QHP8 as seed ortholog is 100%.
Bootstrap support for P08836 as seed ortholog is 100%.

Group of orthologs #2351. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 G.gallus:333

F6SM68              	100.00%		Q5ZIL6              	100.00%
Bootstrap support for F6SM68 as seed ortholog is 100%.
Bootstrap support for Q5ZIL6 as seed ortholog is 100%.

Group of orthologs #2352. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 G.gallus:218

F7A515              	100.00%		F1NSU6              	100.00%
Bootstrap support for F7A515 as seed ortholog is 100%.
Bootstrap support for F1NSU6 as seed ortholog is 100%.

Group of orthologs #2353. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 G.gallus:252

F7B5N7              	100.00%		Q7ZZY2              	100.00%
Bootstrap support for F7B5N7 as seed ortholog is 100%.
Bootstrap support for Q7ZZY2 as seed ortholog is 100%.

Group of orthologs #2354. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 G.gallus:207

F6PRI9              	100.00%		F1ND81              	100.00%
F6TYP3              	16.50%		
Bootstrap support for F6PRI9 as seed ortholog is 99%.
Bootstrap support for F1ND81 as seed ortholog is 100%.

Group of orthologs #2355. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 G.gallus:332

F6QBE1              	100.00%		F1N8J1              	100.00%
Bootstrap support for F6QBE1 as seed ortholog is 100%.
Bootstrap support for F1N8J1 as seed ortholog is 100%.

Group of orthologs #2356. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 G.gallus:332

F6YW46              	100.00%		F1NC43              	100.00%
Bootstrap support for F6YW46 as seed ortholog is 100%.
Bootstrap support for F1NC43 as seed ortholog is 100%.

Group of orthologs #2357. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 G.gallus:332

F7ASX2              	100.00%		F1NZI1              	100.00%
Bootstrap support for F7ASX2 as seed ortholog is 100%.
Bootstrap support for F1NZI1 as seed ortholog is 100%.

Group of orthologs #2358. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 G.gallus:332

F6W248              	100.00%		Q5ZJ64              	100.00%
Bootstrap support for F6W248 as seed ortholog is 100%.
Bootstrap support for Q5ZJ64 as seed ortholog is 100%.

Group of orthologs #2359. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 G.gallus:331

H2XMH4              	100.00%		F1NSP1              	100.00%
                    	       		E1C895              	30.83%
Bootstrap support for H2XMH4 as seed ortholog is 100%.
Bootstrap support for F1NSP1 as seed ortholog is 100%.

Group of orthologs #2360. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 G.gallus:256

C4B8W9              	100.00%		E1BT67              	100.00%
Bootstrap support for C4B8W9 as seed ortholog is 100%.
Bootstrap support for E1BT67 as seed ortholog is 100%.

Group of orthologs #2361. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 G.gallus:331

F6QZI8              	100.00%		E1BZB2              	100.00%
Bootstrap support for F6QZI8 as seed ortholog is 100%.
Bootstrap support for E1BZB2 as seed ortholog is 100%.

Group of orthologs #2362. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 G.gallus:331

F6RCD1              	100.00%		F1NEC2              	100.00%
Bootstrap support for F6RCD1 as seed ortholog is 100%.
Bootstrap support for F1NEC2 as seed ortholog is 100%.

Group of orthologs #2363. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 G.gallus:114

F6T8Y3              	100.00%		F1NYD1              	100.00%
Bootstrap support for F6T8Y3 as seed ortholog is 100%.
Bootstrap support for F1NYD1 as seed ortholog is 99%.

Group of orthologs #2364. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 G.gallus:331

F6PLX9              	100.00%		Q8AWB4              	100.00%
Bootstrap support for F6PLX9 as seed ortholog is 100%.
Bootstrap support for Q8AWB4 as seed ortholog is 100%.

Group of orthologs #2365. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 G.gallus:331

H2XNI7              	100.00%		F1NW34              	100.00%
Bootstrap support for H2XNI7 as seed ortholog is 100%.
Bootstrap support for F1NW34 as seed ortholog is 100%.

Group of orthologs #2366. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 G.gallus:331

F6YJ10              	100.00%		Q5F3M0              	100.00%
Bootstrap support for F6YJ10 as seed ortholog is 100%.
Bootstrap support for Q5F3M0 as seed ortholog is 100%.

Group of orthologs #2367. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 G.gallus:330

H2XY10              	100.00%		E1BZ03              	100.00%
                    	       		F1P2G4              	33.96%
Bootstrap support for H2XY10 as seed ortholog is 100%.
Bootstrap support for E1BZ03 as seed ortholog is 100%.

Group of orthologs #2368. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 G.gallus:330

F6PLY6              	100.00%		E1BXI2              	100.00%
Bootstrap support for F6PLY6 as seed ortholog is 100%.
Bootstrap support for E1BXI2 as seed ortholog is 100%.

Group of orthologs #2369. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 G.gallus:330

F6TJ76              	100.00%		E1BYW9              	100.00%
Bootstrap support for F6TJ76 as seed ortholog is 100%.
Bootstrap support for E1BYW9 as seed ortholog is 100%.

Group of orthologs #2370. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 G.gallus:113

F6Z839              	100.00%		E1BY69              	100.00%
Bootstrap support for F6Z839 as seed ortholog is 99%.
Bootstrap support for E1BY69 as seed ortholog is 99%.

Group of orthologs #2371. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 G.gallus:330

F6SR47              	100.00%		F1NY09              	100.00%
Bootstrap support for F6SR47 as seed ortholog is 100%.
Bootstrap support for F1NY09 as seed ortholog is 100%.

Group of orthologs #2372. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 G.gallus:330

F7BBJ6              	100.00%		F1NR55              	100.00%
Bootstrap support for F7BBJ6 as seed ortholog is 100%.
Bootstrap support for F1NR55 as seed ortholog is 100%.

Group of orthologs #2373. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 G.gallus:330

H2XLQ6              	100.00%		Q5ZHV5              	100.00%
Bootstrap support for H2XLQ6 as seed ortholog is 100%.
Bootstrap support for Q5ZHV5 as seed ortholog is 100%.

Group of orthologs #2374. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 G.gallus:330

H2XPH6              	100.00%		Q5ZLS2              	100.00%
Bootstrap support for H2XPH6 as seed ortholog is 100%.
Bootstrap support for Q5ZLS2 as seed ortholog is 100%.

Group of orthologs #2375. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 G.gallus:330

H2XZI2              	100.00%		H9L0K5              	100.00%
Bootstrap support for H2XZI2 as seed ortholog is 99%.
Bootstrap support for H9L0K5 as seed ortholog is 100%.

Group of orthologs #2376. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 G.gallus:330

H2Y1E6              	100.00%		P07850              	100.00%
Bootstrap support for H2Y1E6 as seed ortholog is 100%.
Bootstrap support for P07850 as seed ortholog is 100%.

Group of orthologs #2377. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:330

H2XWZ5              	100.00%		Q76KB1              	100.00%
Bootstrap support for H2XWZ5 as seed ortholog is 100%.
Bootstrap support for Q76KB1 as seed ortholog is 100%.

Group of orthologs #2378. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 G.gallus:329

F6RU53              	100.00%		E1C657              	100.00%
                    	       		F1NNS4              	16.69%
Bootstrap support for F6RU53 as seed ortholog is 100%.
Bootstrap support for E1C657 as seed ortholog is 100%.

Group of orthologs #2379. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 G.gallus:329

F6YFK6              	100.00%		Q90837              	100.00%
                    	       		E1BVB4              	39.38%
Bootstrap support for F6YFK6 as seed ortholog is 61%.
Alternative seed ortholog is H2XPI4 (22 bits away from this cluster)
Bootstrap support for Q90837 as seed ortholog is 100%.

Group of orthologs #2380. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 G.gallus:70

F6PQ74              	100.00%		E1C2V7              	100.00%
Bootstrap support for F6PQ74 as seed ortholog is 100%.
Bootstrap support for E1C2V7 as seed ortholog is 98%.

Group of orthologs #2381. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 G.gallus:329

F6VLR0              	100.00%		E1C1C7              	100.00%
Bootstrap support for F6VLR0 as seed ortholog is 100%.
Bootstrap support for E1C1C7 as seed ortholog is 100%.

Group of orthologs #2382. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 G.gallus:329

F7B391              	100.00%		E1C2H8              	100.00%
Bootstrap support for F7B391 as seed ortholog is 100%.
Bootstrap support for E1C2H8 as seed ortholog is 100%.

Group of orthologs #2383. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 G.gallus:329

F6ZIP8              	100.00%		F1NRB1              	100.00%
Bootstrap support for F6ZIP8 as seed ortholog is 100%.
Bootstrap support for F1NRB1 as seed ortholog is 100%.

Group of orthologs #2384. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 G.gallus:133

F6WXG6              	100.00%		F1P3U9              	100.00%
Bootstrap support for F6WXG6 as seed ortholog is 99%.
Bootstrap support for F1P3U9 as seed ortholog is 99%.

Group of orthologs #2385. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 G.gallus:329

F7AUJ8              	100.00%		F1NSM1              	100.00%
Bootstrap support for F7AUJ8 as seed ortholog is 97%.
Bootstrap support for F1NSM1 as seed ortholog is 100%.

Group of orthologs #2386. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 G.gallus:329

H2XUT2              	100.00%		Q7ZUA6              	100.00%
Bootstrap support for H2XUT2 as seed ortholog is 100%.
Bootstrap support for Q7ZUA6 as seed ortholog is 100%.

Group of orthologs #2387. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 G.gallus:175

F6X5R6              	100.00%		F1NEG6              	100.00%
                    	       		Q5F3D2              	10.20%
Bootstrap support for F6X5R6 as seed ortholog is 100%.
Bootstrap support for F1NEG6 as seed ortholog is 99%.

Group of orthologs #2388. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 G.gallus:328

F6XYV2              	100.00%		F1NS86              	100.00%
                    	       		F1NYE6              	60.78%
Bootstrap support for F6XYV2 as seed ortholog is 100%.
Bootstrap support for F1NS86 as seed ortholog is 100%.

Group of orthologs #2389. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:95

F6ZHF5              	100.00%		Q3L254              	100.00%
                    	       		F1NWN0              	74.46%
Bootstrap support for F6ZHF5 as seed ortholog is 99%.
Bootstrap support for Q3L254 as seed ortholog is 99%.

Group of orthologs #2390. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 G.gallus:328

F7AP04              	100.00%		F1NVD8              	100.00%
Bootstrap support for F7AP04 as seed ortholog is 100%.
Bootstrap support for F1NVD8 as seed ortholog is 100%.

Group of orthologs #2391. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 G.gallus:328

F6VF67              	100.00%		Q5ZI25              	100.00%
Bootstrap support for F6VF67 as seed ortholog is 100%.
Bootstrap support for Q5ZI25 as seed ortholog is 100%.

Group of orthologs #2392. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 G.gallus:327

F6X1I2              	100.00%		F1NLA1              	100.00%
F6X1I9              	17.96%		F1NXS5              	6.08%
Bootstrap support for F6X1I2 as seed ortholog is 100%.
Bootstrap support for F1NLA1 as seed ortholog is 100%.

Group of orthologs #2393. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 G.gallus:65

Q4H2M5              	100.00%		Q2LMP1              	100.00%
                    	       		F1NVM5              	65.68%
Bootstrap support for Q4H2M5 as seed ortholog is 99%.
Bootstrap support for Q2LMP1 as seed ortholog is 96%.

Group of orthologs #2394. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 G.gallus:327

F7A2R6              	100.00%		E1BR58              	100.00%
Bootstrap support for F7A2R6 as seed ortholog is 100%.
Bootstrap support for E1BR58 as seed ortholog is 100%.

Group of orthologs #2395. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 G.gallus:327

H2XX27              	100.00%		E1C0J0              	100.00%
Bootstrap support for H2XX27 as seed ortholog is 100%.
Bootstrap support for E1C0J0 as seed ortholog is 100%.

Group of orthologs #2396. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 G.gallus:327

F6Z7A4              	100.00%		F1NWK7              	100.00%
Bootstrap support for F6Z7A4 as seed ortholog is 100%.
Bootstrap support for F1NWK7 as seed ortholog is 100%.

Group of orthologs #2397. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 G.gallus:327

H2XS53              	100.00%		F1NCJ8              	100.00%
Bootstrap support for H2XS53 as seed ortholog is 84%.
Bootstrap support for F1NCJ8 as seed ortholog is 100%.

Group of orthologs #2398. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 G.gallus:327

F7A7A0              	100.00%		F1NX57              	100.00%
Bootstrap support for F7A7A0 as seed ortholog is 100%.
Bootstrap support for F1NX57 as seed ortholog is 100%.

Group of orthologs #2399. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 G.gallus:105

F7A5W3              	100.00%		F1NZW9              	100.00%
Bootstrap support for F7A5W3 as seed ortholog is 100%.
Bootstrap support for F1NZW9 as seed ortholog is 99%.

Group of orthologs #2400. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 G.gallus:327

F7BI62              	100.00%		F1P4Z9              	100.00%
Bootstrap support for F7BI62 as seed ortholog is 100%.
Bootstrap support for F1P4Z9 as seed ortholog is 100%.

Group of orthologs #2401. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 G.gallus:110

F6TL65              	100.00%		E1BY32              	100.00%
F6ZNW9              	100.00%		F1NJG4              	100.00%
F7B9K0              	100.00%		F1NFF7              	52.60%
H2XRT7              	100.00%		F1P2F9              	30.61%
H2Y2D9              	38.57%		F1NWE0              	23.18%
F6TL47              	37.57%		F1NT96              	18.19%
F7BB38              	32.43%		E1C4W1              	16.39%
F7A0M9              	17.57%		F1NT95              	16.25%
F6PUR6              	11.86%		E1BVV4              	13.89%
H2XJM1              	9.29%		P05180              	12.18%
L7N0S0              	8.71%		P20678              	11.59%
H2XXR0              	8.71%		E1C5A9              	10.85%
F6PLM8              	8.00%		F1NBZ5              	9.72%
H2XMC8              	6.57%		F1NDQ4              	8.47%
H2XVS1              	6.43%		F1NB14              	8.33%
H2Y171              	6.43%		
Bootstrap support for F6TL65 as seed ortholog is 78%.
Bootstrap support for F6ZNW9 as seed ortholog is 73%.
Alternative seed ortholog is F6VYD7 (37 bits away from this cluster)
Bootstrap support for F7B9K0 as seed ortholog is 69%.
Alternative seed ortholog is F6VYD7 (37 bits away from this cluster)
Bootstrap support for H2XRT7 as seed ortholog is 69%.
Alternative seed ortholog is F6VYD7 (37 bits away from this cluster)
Bootstrap support for E1BY32 as seed ortholog is 99%.
Bootstrap support for F1NJG4 as seed ortholog is 96%.

Group of orthologs #2402. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 G.gallus:238

F7AXZ4              	100.00%		F1P421              	100.00%
                    	       		E1C7T5              	20.13%
                    	       		E1C0F7              	13.33%
Bootstrap support for F7AXZ4 as seed ortholog is 100%.
Bootstrap support for F1P421 as seed ortholog is 100%.

Group of orthologs #2403. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 G.gallus:110

F6VZA9              	100.00%		E1C809              	100.00%
F6SJY8              	18.36%		
Bootstrap support for F6VZA9 as seed ortholog is 100%.
Bootstrap support for E1C809 as seed ortholog is 99%.

Group of orthologs #2404. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 G.gallus:326

F6U8F8              	100.00%		F1NK10              	100.00%
                    	       		E1BXA9              	7.83%
Bootstrap support for F6U8F8 as seed ortholog is 100%.
Bootstrap support for F1NK10 as seed ortholog is 100%.

Group of orthologs #2405. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 G.gallus:326

F6XPZ4              	100.00%		O13270              	100.00%
                    	       		F1NEQ8              	19.56%
Bootstrap support for F6XPZ4 as seed ortholog is 100%.
Bootstrap support for O13270 as seed ortholog is 100%.

Group of orthologs #2406. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 G.gallus:326

F6SVK8              	100.00%		E1BS20              	100.00%
Bootstrap support for F6SVK8 as seed ortholog is 100%.
Bootstrap support for E1BS20 as seed ortholog is 100%.

Group of orthologs #2407. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 G.gallus:276

F6ZVR2              	100.00%		E1BZW8              	100.00%
Bootstrap support for F6ZVR2 as seed ortholog is 100%.
Bootstrap support for E1BZW8 as seed ortholog is 100%.

Group of orthologs #2408. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 G.gallus:150

H2XUQ0              	100.00%		E1BV31              	100.00%
Bootstrap support for H2XUQ0 as seed ortholog is 100%.
Bootstrap support for E1BV31 as seed ortholog is 99%.

Group of orthologs #2409. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 G.gallus:326

F7AH61              	100.00%		F1NJG2              	100.00%
Bootstrap support for F7AH61 as seed ortholog is 100%.
Bootstrap support for F1NJG2 as seed ortholog is 100%.

Group of orthologs #2410. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 G.gallus:160

F6WPT0              	100.00%		O42101              	100.00%
Bootstrap support for F6WPT0 as seed ortholog is 100%.
Bootstrap support for O42101 as seed ortholog is 99%.

Group of orthologs #2411. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:326

F6YH77              	100.00%		Q5ZLK5              	100.00%
Bootstrap support for F6YH77 as seed ortholog is 98%.
Bootstrap support for Q5ZLK5 as seed ortholog is 100%.

Group of orthologs #2412. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 G.gallus:235

Q4H2Q6              	100.00%		Q5ZLN5              	100.00%
Bootstrap support for Q4H2Q6 as seed ortholog is 100%.
Bootstrap support for Q5ZLN5 as seed ortholog is 100%.

Group of orthologs #2413. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 G.gallus:325

F7A1F6              	100.00%		F1NEZ9              	100.00%
F7A1G9              	30.68%		F1NU57              	20.75%
Bootstrap support for F7A1F6 as seed ortholog is 100%.
Bootstrap support for F1NEZ9 as seed ortholog is 100%.

Group of orthologs #2414. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 G.gallus:325

F6RTY1              	100.00%		E1C0J8              	100.00%
Bootstrap support for F6RTY1 as seed ortholog is 100%.
Bootstrap support for E1C0J8 as seed ortholog is 100%.

Group of orthologs #2415. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:325

F6RY16              	100.00%		F1NZP6              	100.00%
Bootstrap support for F6RY16 as seed ortholog is 98%.
Bootstrap support for F1NZP6 as seed ortholog is 100%.

Group of orthologs #2416. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 G.gallus:212

F6YI64              	100.00%		O42265              	100.00%
Bootstrap support for F6YI64 as seed ortholog is 100%.
Bootstrap support for O42265 as seed ortholog is 100%.

Group of orthologs #2417. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 G.gallus:325

F6YIU9              	100.00%		Q5ZK21              	100.00%
Bootstrap support for F6YIU9 as seed ortholog is 100%.
Bootstrap support for Q5ZK21 as seed ortholog is 100%.

Group of orthologs #2418. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 G.gallus:325

H2XW94              	100.00%		F1P1L0              	100.00%
Bootstrap support for H2XW94 as seed ortholog is 80%.
Bootstrap support for F1P1L0 as seed ortholog is 100%.

Group of orthologs #2419. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 G.gallus:47

F6WSV3              	100.00%		F1P434              	100.00%
                    	       		F1NZ99              	11.61%
Bootstrap support for F6WSV3 as seed ortholog is 100%.
Bootstrap support for F1P434 as seed ortholog is 93%.

Group of orthologs #2420. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 G.gallus:324

F7BK20              	100.00%		F1NNS0              	100.00%
                    	       		F1NSF2              	22.17%
Bootstrap support for F7BK20 as seed ortholog is 100%.
Bootstrap support for F1NNS0 as seed ortholog is 100%.

Group of orthologs #2421. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 G.gallus:324

H2XVA2              	100.00%		F1NAH2              	100.00%
                    	       		F1NEC0              	36.67%
Bootstrap support for H2XVA2 as seed ortholog is 100%.
Bootstrap support for F1NAH2 as seed ortholog is 100%.

Group of orthologs #2422. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:197

F6PIZ2              	100.00%		E1C175              	100.00%
Bootstrap support for F6PIZ2 as seed ortholog is 100%.
Bootstrap support for E1C175 as seed ortholog is 100%.

Group of orthologs #2423. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 G.gallus:324

F6YMG8              	100.00%		E1C4R3              	100.00%
Bootstrap support for F6YMG8 as seed ortholog is 100%.
Bootstrap support for E1C4R3 as seed ortholog is 100%.

Group of orthologs #2424. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 G.gallus:324

F6WRB6              	100.00%		F1NJ51              	100.00%
Bootstrap support for F6WRB6 as seed ortholog is 100%.
Bootstrap support for F1NJ51 as seed ortholog is 100%.

Group of orthologs #2425. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 G.gallus:324

F6WBE1              	100.00%		F1NLE4              	100.00%
Bootstrap support for F6WBE1 as seed ortholog is 100%.
Bootstrap support for F1NLE4 as seed ortholog is 100%.

Group of orthologs #2426. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 G.gallus:324

F6V6S8              	100.00%		F1NT19              	100.00%
Bootstrap support for F6V6S8 as seed ortholog is 100%.
Bootstrap support for F1NT19 as seed ortholog is 100%.

Group of orthologs #2427. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 G.gallus:22

H2XLH6              	100.00%		F1NCQ3              	100.00%
Bootstrap support for H2XLH6 as seed ortholog is 92%.
Bootstrap support for F1NCQ3 as seed ortholog is 76%.

Group of orthologs #2428. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 G.gallus:324

H2XPJ2              	100.00%		F1NUY7              	100.00%
Bootstrap support for H2XPJ2 as seed ortholog is 100%.
Bootstrap support for F1NUY7 as seed ortholog is 100%.

Group of orthologs #2429. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 G.gallus:324

H2XTG6              	100.00%		P16924              	100.00%
Bootstrap support for H2XTG6 as seed ortholog is 96%.
Bootstrap support for P16924 as seed ortholog is 100%.

Group of orthologs #2430. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 G.gallus:168

F6Z145              	100.00%		E1BZE6              	100.00%
F7B1Z2              	16.22%		Q5ZME1              	32.30%
Bootstrap support for F6Z145 as seed ortholog is 95%.
Bootstrap support for E1BZE6 as seed ortholog is 99%.

Group of orthologs #2431. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 G.gallus:58

F6WIM7              	100.00%		F1NXX1              	100.00%
F6YLB5              	5.23%		F1NXX3              	39.01%
Bootstrap support for F6WIM7 as seed ortholog is 93%.
Bootstrap support for F1NXX1 as seed ortholog is 90%.

Group of orthologs #2432. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 G.gallus:152

F6ZHC8              	100.00%		F1NIK5              	100.00%
                    	       		F1NP96              	17.29%
Bootstrap support for F6ZHC8 as seed ortholog is 100%.
Bootstrap support for F1NIK5 as seed ortholog is 99%.

Group of orthologs #2433. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 G.gallus:323

F6XYB7              	100.00%		E1BYR0              	100.00%
Bootstrap support for F6XYB7 as seed ortholog is 100%.
Bootstrap support for E1BYR0 as seed ortholog is 100%.

Group of orthologs #2434. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 G.gallus:323

F6QQZ3              	100.00%		F1NNS8              	100.00%
Bootstrap support for F6QQZ3 as seed ortholog is 100%.
Bootstrap support for F1NNS8 as seed ortholog is 100%.

Group of orthologs #2435. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 G.gallus:323

F6ZB45              	100.00%		E1C1B7              	100.00%
Bootstrap support for F6ZB45 as seed ortholog is 100%.
Bootstrap support for E1C1B7 as seed ortholog is 100%.

Group of orthologs #2436. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 G.gallus:323

F6UJD6              	100.00%		F1NSS7              	100.00%
Bootstrap support for F6UJD6 as seed ortholog is 100%.
Bootstrap support for F1NSS7 as seed ortholog is 100%.

Group of orthologs #2437. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 G.gallus:323

F6PHR7              	100.00%		Q8UVS4              	100.00%
Bootstrap support for F6PHR7 as seed ortholog is 100%.
Bootstrap support for Q8UVS4 as seed ortholog is 100%.

Group of orthologs #2438. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 G.gallus:323

H2XLN7              	100.00%		F1P419              	100.00%
Bootstrap support for H2XLN7 as seed ortholog is 100%.
Bootstrap support for F1P419 as seed ortholog is 100%.

Group of orthologs #2439. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 G.gallus:323

Q4H3E2              	100.00%		F1P1G7              	100.00%
Bootstrap support for Q4H3E2 as seed ortholog is 100%.
Bootstrap support for F1P1G7 as seed ortholog is 100%.

Group of orthologs #2440. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 G.gallus:322

H2XPK8              	100.00%		E1BQ54              	100.00%
                    	       		H9L1C0              	73.56%
Bootstrap support for H2XPK8 as seed ortholog is 100%.
Bootstrap support for E1BQ54 as seed ortholog is 100%.

Group of orthologs #2441. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 G.gallus:322

F6WSZ7              	100.00%		E1BZ00              	100.00%
Bootstrap support for F6WSZ7 as seed ortholog is 100%.
Bootstrap support for E1BZ00 as seed ortholog is 100%.

Group of orthologs #2442. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 G.gallus:322

F6WCC6              	100.00%		E1C1C8              	100.00%
Bootstrap support for F6WCC6 as seed ortholog is 100%.
Bootstrap support for E1C1C8 as seed ortholog is 100%.

Group of orthologs #2443. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 G.gallus:322

H2XM43              	100.00%		E1C7M3              	100.00%
Bootstrap support for H2XM43 as seed ortholog is 100%.
Bootstrap support for E1C7M3 as seed ortholog is 100%.

Group of orthologs #2444. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 G.gallus:322

F6YSM6              	100.00%		F1NN96              	100.00%
Bootstrap support for F6YSM6 as seed ortholog is 100%.
Bootstrap support for F1NN96 as seed ortholog is 100%.

Group of orthologs #2445. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 G.gallus:258

H2XZQ0              	100.00%		E1C3A3              	100.00%
Bootstrap support for H2XZQ0 as seed ortholog is 100%.
Bootstrap support for E1C3A3 as seed ortholog is 100%.

Group of orthologs #2446. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 G.gallus:253

H2XX04              	100.00%		F1P1V5              	100.00%
Bootstrap support for H2XX04 as seed ortholog is 100%.
Bootstrap support for F1P1V5 as seed ortholog is 100%.

Group of orthologs #2447. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 G.gallus:266

H2XTW5              	100.00%		Q5ZK69              	100.00%
Bootstrap support for H2XTW5 as seed ortholog is 100%.
Bootstrap support for Q5ZK69 as seed ortholog is 100%.

Group of orthologs #2448. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 G.gallus:50

F6PM82              	100.00%		P42324              	100.00%
                    	       		P62758              	63.01%
                    	       		F1NJU0              	57.53%
Bootstrap support for F6PM82 as seed ortholog is 99%.
Bootstrap support for P42324 as seed ortholog is 99%.

Group of orthologs #2449. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 G.gallus:321

F6TN28              	100.00%		E1BRW9              	100.00%
                    	       		E1BRW8              	49.37%
Bootstrap support for F6TN28 as seed ortholog is 100%.
Bootstrap support for E1BRW9 as seed ortholog is 100%.

Group of orthologs #2450. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:208

F6PIE8              	100.00%		E1BSF1              	100.00%
Bootstrap support for F6PIE8 as seed ortholog is 100%.
Bootstrap support for E1BSF1 as seed ortholog is 100%.

Group of orthologs #2451. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 G.gallus:321

C4B8X5              	100.00%		E1BZ25              	100.00%
Bootstrap support for C4B8X5 as seed ortholog is 100%.
Bootstrap support for E1BZ25 as seed ortholog is 100%.

Group of orthologs #2452. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 G.gallus:321

F6VKZ4              	100.00%		E1BX01              	100.00%
Bootstrap support for F6VKZ4 as seed ortholog is 100%.
Bootstrap support for E1BX01 as seed ortholog is 100%.

Group of orthologs #2453. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 G.gallus:321

F6YG52              	100.00%		E1BU51              	100.00%
Bootstrap support for F6YG52 as seed ortholog is 100%.
Bootstrap support for E1BU51 as seed ortholog is 100%.

Group of orthologs #2454. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 G.gallus:321

F6SXS1              	100.00%		F1N8V7              	100.00%
Bootstrap support for F6SXS1 as seed ortholog is 99%.
Bootstrap support for F1N8V7 as seed ortholog is 100%.

Group of orthologs #2455. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 G.gallus:321

F6RPC5              	100.00%		F1NKW9              	100.00%
Bootstrap support for F6RPC5 as seed ortholog is 100%.
Bootstrap support for F1NKW9 as seed ortholog is 100%.

Group of orthologs #2456. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 G.gallus:321

H2XWD3              	100.00%		E1C538              	100.00%
Bootstrap support for H2XWD3 as seed ortholog is 100%.
Bootstrap support for E1C538 as seed ortholog is 100%.

Group of orthologs #2457. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 G.gallus:321

F6TJ64              	100.00%		Q5F414              	100.00%
Bootstrap support for F6TJ64 as seed ortholog is 100%.
Bootstrap support for Q5F414 as seed ortholog is 100%.

Group of orthologs #2458. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 G.gallus:246

H2XSX6              	100.00%		F1NZ19              	100.00%
Bootstrap support for H2XSX6 as seed ortholog is 100%.
Bootstrap support for F1NZ19 as seed ortholog is 100%.

Group of orthologs #2459. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 G.gallus:205

F6R8N5              	100.00%		F1NZV9              	100.00%
                    	       		F1NZL3              	11.93%
                    	       		Q9PUB4              	6.70%
Bootstrap support for F6R8N5 as seed ortholog is 98%.
Bootstrap support for F1NZV9 as seed ortholog is 100%.

Group of orthologs #2460. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 G.gallus:320

F6RCC2              	100.00%		F1P2P4              	100.00%
I6L237              	95.91%		
Bootstrap support for F6RCC2 as seed ortholog is 100%.
Bootstrap support for F1P2P4 as seed ortholog is 100%.

Group of orthologs #2461. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 G.gallus:320

F6Q196              	100.00%		E1C4M9              	100.00%
Bootstrap support for F6Q196 as seed ortholog is 99%.
Bootstrap support for E1C4M9 as seed ortholog is 100%.

Group of orthologs #2462. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 G.gallus:320

F6Y7V1              	100.00%		F1NJU8              	100.00%
Bootstrap support for F6Y7V1 as seed ortholog is 100%.
Bootstrap support for F1NJU8 as seed ortholog is 100%.

Group of orthologs #2463. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 G.gallus:165

F7AHE1              	100.00%		F1NC27              	100.00%
Bootstrap support for F7AHE1 as seed ortholog is 100%.
Bootstrap support for F1NC27 as seed ortholog is 100%.

Group of orthologs #2464. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 G.gallus:320

F6VBT4              	100.00%		Q5ZHM8              	100.00%
Bootstrap support for F6VBT4 as seed ortholog is 100%.
Bootstrap support for Q5ZHM8 as seed ortholog is 100%.

Group of orthologs #2465. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 G.gallus:40

F6Z255              	100.00%		Q5ZIT5              	100.00%
Bootstrap support for F6Z255 as seed ortholog is 100%.
Bootstrap support for Q5ZIT5 as seed ortholog is 98%.

Group of orthologs #2466. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 G.gallus:320

F7ASI0              	100.00%		Q5ZMF9              	100.00%
Bootstrap support for F7ASI0 as seed ortholog is 100%.
Bootstrap support for Q5ZMF9 as seed ortholog is 100%.

Group of orthologs #2467. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 G.gallus:320

H2XM20              	100.00%		Q5F384              	100.00%
Bootstrap support for H2XM20 as seed ortholog is 100%.
Bootstrap support for Q5F384 as seed ortholog is 100%.

Group of orthologs #2468. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 G.gallus:132

F6S1S7              	100.00%		Q5ZHW4              	100.00%
                    	       		Q5ZIP7              	45.71%
                    	       		Q98932              	38.10%
Bootstrap support for F6S1S7 as seed ortholog is 100%.
Bootstrap support for Q5ZHW4 as seed ortholog is 100%.

Group of orthologs #2469. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 G.gallus:319

H2XVS3              	100.00%		P58270              	100.00%
                    	       		P58268              	30.68%
                    	       		P58267              	17.46%
Bootstrap support for H2XVS3 as seed ortholog is 100%.
Bootstrap support for P58270 as seed ortholog is 100%.

Group of orthologs #2470. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:118

F7APE7              	100.00%		F1NAF6              	100.00%
                    	       		Q5ZM34              	9.57%
Bootstrap support for F7APE7 as seed ortholog is 99%.
Bootstrap support for F1NAF6 as seed ortholog is 99%.

Group of orthologs #2471. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 G.gallus:319

F6TI55              	100.00%		E1BQB7              	100.00%
Bootstrap support for F6TI55 as seed ortholog is 100%.
Bootstrap support for E1BQB7 as seed ortholog is 100%.

Group of orthologs #2472. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 G.gallus:319

F7BC45              	100.00%		E1C5Z1              	100.00%
Bootstrap support for F7BC45 as seed ortholog is 100%.
Bootstrap support for E1C5Z1 as seed ortholog is 100%.

Group of orthologs #2473. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 G.gallus:319

F6W2L5              	100.00%		H9KYV1              	100.00%
Bootstrap support for F6W2L5 as seed ortholog is 100%.
Bootstrap support for H9KYV1 as seed ortholog is 100%.

Group of orthologs #2474. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 G.gallus:319

H2Y1L9              	100.00%		F1NT42              	100.00%
Bootstrap support for H2Y1L9 as seed ortholog is 100%.
Bootstrap support for F1NT42 as seed ortholog is 100%.

Group of orthologs #2475. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 G.gallus:318

F6YXT8              	100.00%		E1BYM1              	100.00%
Bootstrap support for F6YXT8 as seed ortholog is 100%.
Bootstrap support for E1BYM1 as seed ortholog is 100%.

Group of orthologs #2476. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 G.gallus:318

F6S4U2              	100.00%		F1NLK0              	100.00%
Bootstrap support for F6S4U2 as seed ortholog is 100%.
Bootstrap support for F1NLK0 as seed ortholog is 100%.

Group of orthologs #2477. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 G.gallus:122

F7API1              	100.00%		F1NWC1              	100.00%
Bootstrap support for F7API1 as seed ortholog is 100%.
Bootstrap support for F1NWC1 as seed ortholog is 99%.

Group of orthologs #2478. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 G.gallus:318

I6L212              	100.00%		F1NCV7              	100.00%
Bootstrap support for I6L212 as seed ortholog is 100%.
Bootstrap support for F1NCV7 as seed ortholog is 100%.

Group of orthologs #2479. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 G.gallus:254

H2XMQ4              	100.00%		F1P2X1              	100.00%
Bootstrap support for H2XMQ4 as seed ortholog is 100%.
Bootstrap support for F1P2X1 as seed ortholog is 100%.

Group of orthologs #2480. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 G.gallus:250

H2XKH3              	100.00%		P29332              	100.00%
Bootstrap support for H2XKH3 as seed ortholog is 100%.
Bootstrap support for P29332 as seed ortholog is 100%.

Group of orthologs #2481. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 G.gallus:172

F7BHG2              	100.00%		Q5ZK36              	100.00%
Bootstrap support for F7BHG2 as seed ortholog is 99%.
Bootstrap support for Q5ZK36 as seed ortholog is 100%.

Group of orthologs #2482. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 G.gallus:317

F6WEK5              	100.00%		E1C2T4              	100.00%
                    	       		F1NB01              	41.46%
Bootstrap support for F6WEK5 as seed ortholog is 100%.
Bootstrap support for E1C2T4 as seed ortholog is 100%.

Group of orthologs #2483. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 G.gallus:317

F6WIW4              	100.00%		F1N8A4              	100.00%
                    	       		F1P3E8              	26.24%
Bootstrap support for F6WIW4 as seed ortholog is 100%.
Bootstrap support for F1N8A4 as seed ortholog is 100%.

Group of orthologs #2484. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 G.gallus:317

H2XSL3              	100.00%		E1C1D2              	100.00%
                    	       		F1P5I1              	41.61%
Bootstrap support for H2XSL3 as seed ortholog is 100%.
Bootstrap support for E1C1D2 as seed ortholog is 100%.

Group of orthologs #2485. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 G.gallus:117

F6Q539              	100.00%		F1NF59              	100.00%
Bootstrap support for F6Q539 as seed ortholog is 100%.
Bootstrap support for F1NF59 as seed ortholog is 99%.

Group of orthologs #2486. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 G.gallus:317

F6Y9F6              	100.00%		E1BY06              	100.00%
Bootstrap support for F6Y9F6 as seed ortholog is 100%.
Bootstrap support for E1BY06 as seed ortholog is 100%.

Group of orthologs #2487. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 G.gallus:317

F6QAK1              	100.00%		F1P1V6              	100.00%
Bootstrap support for F6QAK1 as seed ortholog is 100%.
Bootstrap support for F1P1V6 as seed ortholog is 100%.

Group of orthologs #2488. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 G.gallus:317

F6R8Z1              	100.00%		H9L0K6              	100.00%
Bootstrap support for F6R8Z1 as seed ortholog is 100%.
Bootstrap support for H9L0K6 as seed ortholog is 100%.

Group of orthologs #2489. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 G.gallus:317

F6VF91              	100.00%		Q5F484              	100.00%
Bootstrap support for F6VF91 as seed ortholog is 100%.
Bootstrap support for Q5F484 as seed ortholog is 100%.

Group of orthologs #2490. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 G.gallus:127

F6Z498              	100.00%		E1BQ65              	100.00%
                    	       		F1NUJ4              	18.24%
Bootstrap support for F6Z498 as seed ortholog is 99%.
Bootstrap support for E1BQ65 as seed ortholog is 99%.

Group of orthologs #2491. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 G.gallus:316

F6YAY9              	100.00%		E1BRJ6              	100.00%
Bootstrap support for F6YAY9 as seed ortholog is 100%.
Bootstrap support for E1BRJ6 as seed ortholog is 100%.

Group of orthologs #2492. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 G.gallus:228

F6QEH2              	100.00%		F1NFV0              	100.00%
Bootstrap support for F6QEH2 as seed ortholog is 100%.
Bootstrap support for F1NFV0 as seed ortholog is 100%.

Group of orthologs #2493. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 G.gallus:316

F6WQE3              	100.00%		F1NVM3              	100.00%
Bootstrap support for F6WQE3 as seed ortholog is 100%.
Bootstrap support for F1NVM3 as seed ortholog is 100%.

Group of orthologs #2494. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 G.gallus:316

H2XW41              	100.00%		E1BZ62              	100.00%
Bootstrap support for H2XW41 as seed ortholog is 100%.
Bootstrap support for E1BZ62 as seed ortholog is 100%.

Group of orthologs #2495. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 G.gallus:107

F6REF5              	100.00%		E1BXF4              	100.00%
F6XGI2              	100.00%		
F7AV16              	6.12%		
Bootstrap support for F6REF5 as seed ortholog is 99%.
Bootstrap support for F6XGI2 as seed ortholog is 100%.
Bootstrap support for E1BXF4 as seed ortholog is 99%.

Group of orthologs #2496. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 G.gallus:315

F6W023              	100.00%		F1NSG6              	100.00%
                    	       		F1NFQ6              	28.44%
                    	       		F1NTU5              	6.33%
Bootstrap support for F6W023 as seed ortholog is 100%.
Bootstrap support for F1NSG6 as seed ortholog is 100%.

Group of orthologs #2497. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 G.gallus:143

F6WWY7              	100.00%		E1BZ73              	100.00%
                    	       		F1NLC0              	16.02%
Bootstrap support for F6WWY7 as seed ortholog is 100%.
Bootstrap support for E1BZ73 as seed ortholog is 99%.

Group of orthologs #2498. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 G.gallus:315

F6YGZ1              	100.00%		E1C8E9              	100.00%
                    	       		E1C4U3              	5.41%
Bootstrap support for F6YGZ1 as seed ortholog is 100%.
Bootstrap support for E1C8E9 as seed ortholog is 100%.

Group of orthologs #2499. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 G.gallus:221

F6UQ99              	100.00%		F1NS09              	100.00%
                    	       		F1NTP6              	30.55%
Bootstrap support for F6UQ99 as seed ortholog is 100%.
Bootstrap support for F1NS09 as seed ortholog is 100%.

Group of orthologs #2500. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 G.gallus:315

F6XFZ5              	100.00%		E1C7K4              	100.00%
Bootstrap support for F6XFZ5 as seed ortholog is 100%.
Bootstrap support for E1C7K4 as seed ortholog is 100%.

Group of orthologs #2501. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 G.gallus:315

F6V771              	100.00%		F1NDA2              	100.00%
Bootstrap support for F6V771 as seed ortholog is 100%.
Bootstrap support for F1NDA2 as seed ortholog is 100%.

Group of orthologs #2502. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 G.gallus:200

F6V5G2              	100.00%		F1NWE7              	100.00%
Bootstrap support for F6V5G2 as seed ortholog is 99%.
Bootstrap support for F1NWE7 as seed ortholog is 100%.

Group of orthologs #2503. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 G.gallus:315

F6S1K1              	100.00%		Q5F339              	100.00%
Bootstrap support for F6S1K1 as seed ortholog is 100%.
Bootstrap support for Q5F339 as seed ortholog is 100%.

Group of orthologs #2504. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 G.gallus:315

F6V5K2              	100.00%		Q98TX3              	100.00%
Bootstrap support for F6V5K2 as seed ortholog is 100%.
Bootstrap support for Q98TX3 as seed ortholog is 100%.

Group of orthologs #2505. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 G.gallus:315

H2XNY0              	100.00%		F1NSX3              	100.00%
Bootstrap support for H2XNY0 as seed ortholog is 100%.
Bootstrap support for F1NSX3 as seed ortholog is 100%.

Group of orthologs #2506. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 G.gallus:98

H2XS44              	100.00%		F1P2U7              	100.00%
Bootstrap support for H2XS44 as seed ortholog is 100%.
Bootstrap support for F1P2U7 as seed ortholog is 97%.

Group of orthologs #2507. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 G.gallus:131

F6TIL4              	100.00%		F1NUT2              	100.00%
                    	       		P87373              	45.90%
                    	       		F1P4H2              	24.06%
Bootstrap support for F6TIL4 as seed ortholog is 100%.
Bootstrap support for F1NUT2 as seed ortholog is 100%.

Group of orthologs #2508. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 G.gallus:314

F6VIA9              	100.00%		F1NYA9              	100.00%
                    	       		Q9YGQ1              	100.00%
Bootstrap support for F6VIA9 as seed ortholog is 100%.
Bootstrap support for F1NYA9 as seed ortholog is 100%.
Bootstrap support for Q9YGQ1 as seed ortholog is 100%.

Group of orthologs #2509. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 G.gallus:314

H2XVX0              	100.00%		E1C1Q5              	100.00%
                    	       		F1ND41              	5.82%
Bootstrap support for H2XVX0 as seed ortholog is 100%.
Bootstrap support for E1C1Q5 as seed ortholog is 100%.

Group of orthologs #2510. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 G.gallus:314

F6PJS6              	100.00%		F1NHP2              	100.00%
Bootstrap support for F6PJS6 as seed ortholog is 100%.
Bootstrap support for F1NHP2 as seed ortholog is 100%.

Group of orthologs #2511. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 G.gallus:314

F6ZKV3              	100.00%		E1BRR9              	100.00%
Bootstrap support for F6ZKV3 as seed ortholog is 100%.
Bootstrap support for E1BRR9 as seed ortholog is 100%.

Group of orthologs #2512. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 G.gallus:314

F6R939              	100.00%		F1NNL1              	100.00%
Bootstrap support for F6R939 as seed ortholog is 100%.
Bootstrap support for F1NNL1 as seed ortholog is 100%.

Group of orthologs #2513. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 G.gallus:245

F7BEV9              	100.00%		E1C0Y2              	100.00%
Bootstrap support for F7BEV9 as seed ortholog is 100%.
Bootstrap support for E1C0Y2 as seed ortholog is 100%.

Group of orthologs #2514. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 G.gallus:85

F7AEE6              	100.00%		F1NEL2              	100.00%
Bootstrap support for F7AEE6 as seed ortholog is 100%.
Bootstrap support for F1NEL2 as seed ortholog is 99%.

Group of orthologs #2515. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 G.gallus:29

H2XUU8              	100.00%		E1C1Q3              	100.00%
Bootstrap support for H2XUU8 as seed ortholog is 100%.
Bootstrap support for E1C1Q3 as seed ortholog is 73%.
Alternative seed ortholog is F1NMA1 (29 bits away from this cluster)

Group of orthologs #2516. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 G.gallus:67

H2XSU2              	100.00%		F1NBE4              	100.00%
                    	       		E1BQT7              	11.78%
Bootstrap support for H2XSU2 as seed ortholog is 100%.
Bootstrap support for F1NBE4 as seed ortholog is 94%.

Group of orthologs #2517. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 G.gallus:313

F6T1X5              	100.00%		E1BS19              	100.00%
Bootstrap support for F6T1X5 as seed ortholog is 100%.
Bootstrap support for E1BS19 as seed ortholog is 100%.

Group of orthologs #2518. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 G.gallus:313

F6WGS7              	100.00%		E1BUQ6              	100.00%
Bootstrap support for F6WGS7 as seed ortholog is 100%.
Bootstrap support for E1BUQ6 as seed ortholog is 100%.

Group of orthologs #2519. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 G.gallus:232

F6PKP1              	100.00%		F1NSB7              	100.00%
Bootstrap support for F6PKP1 as seed ortholog is 100%.
Bootstrap support for F1NSB7 as seed ortholog is 100%.

Group of orthologs #2520. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 G.gallus:313

F7A5A0              	100.00%		E1C050              	100.00%
Bootstrap support for F7A5A0 as seed ortholog is 100%.
Bootstrap support for E1C050 as seed ortholog is 100%.

Group of orthologs #2521. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 G.gallus:313

F6VT16              	100.00%		F1NGU1              	100.00%
Bootstrap support for F6VT16 as seed ortholog is 100%.
Bootstrap support for F1NGU1 as seed ortholog is 100%.

Group of orthologs #2522. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 G.gallus:193

F6XWH9              	100.00%		F1NE93              	100.00%
Bootstrap support for F6XWH9 as seed ortholog is 100%.
Bootstrap support for F1NE93 as seed ortholog is 100%.

Group of orthologs #2523. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 G.gallus:313

F7AF81              	100.00%		F1N8E3              	100.00%
Bootstrap support for F7AF81 as seed ortholog is 100%.
Bootstrap support for F1N8E3 as seed ortholog is 100%.

Group of orthologs #2524. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 G.gallus:313

F6RC25              	100.00%		P34065              	100.00%
Bootstrap support for F6RC25 as seed ortholog is 100%.
Bootstrap support for P34065 as seed ortholog is 100%.

Group of orthologs #2525. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 G.gallus:100

F6Y8L3              	100.00%		E1C2B2              	100.00%
F7BE27              	18.41%		Q8UUK1              	37.02%
F7B4M8              	14.61%		
Bootstrap support for F6Y8L3 as seed ortholog is 96%.
Bootstrap support for E1C2B2 as seed ortholog is 99%.

Group of orthologs #2526. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 G.gallus:312

F7AK31              	100.00%		E1BS31              	100.00%
                    	       		F1N8B5              	45.44%
                    	       		E1BWL4              	12.11%
Bootstrap support for F7AK31 as seed ortholog is 100%.
Bootstrap support for E1BS31 as seed ortholog is 100%.

Group of orthologs #2527. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 G.gallus:32

F6X7Y3              	100.00%		F1NNJ4              	100.00%
                    	       		F1N8F7              	23.51%
Bootstrap support for F6X7Y3 as seed ortholog is 90%.
Bootstrap support for F1NNJ4 as seed ortholog is 85%.

Group of orthologs #2528. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 G.gallus:145

H2Y050              	100.00%		F1P3D6              	100.00%
                    	       		F1ND77              	30.61%
Bootstrap support for H2Y050 as seed ortholog is 100%.
Bootstrap support for F1P3D6 as seed ortholog is 100%.

Group of orthologs #2529. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 G.gallus:312

Q4H2V9              	100.00%		P16236              	100.00%
                    	       		P98152              	5.89%
Bootstrap support for Q4H2V9 as seed ortholog is 100%.
Bootstrap support for P16236 as seed ortholog is 100%.

Group of orthologs #2530. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 G.gallus:258

F6TVY6              	100.00%		E1BSI1              	100.00%
Bootstrap support for F6TVY6 as seed ortholog is 100%.
Bootstrap support for E1BSI1 as seed ortholog is 100%.

Group of orthologs #2531. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 G.gallus:312

F6XNG1              	100.00%		E1BR82              	100.00%
Bootstrap support for F6XNG1 as seed ortholog is 100%.
Bootstrap support for E1BR82 as seed ortholog is 100%.

Group of orthologs #2532. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 G.gallus:312

F6VD90              	100.00%		F1NMN3              	100.00%
Bootstrap support for F6VD90 as seed ortholog is 100%.
Bootstrap support for F1NMN3 as seed ortholog is 100%.

Group of orthologs #2533. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 G.gallus:312

F6RCH7              	100.00%		Q5ZHY5              	100.00%
Bootstrap support for F6RCH7 as seed ortholog is 100%.
Bootstrap support for Q5ZHY5 as seed ortholog is 100%.

Group of orthologs #2534. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 G.gallus:37

F6VFD2              	100.00%		Q5F425              	100.00%
Bootstrap support for F6VFD2 as seed ortholog is 100%.
Bootstrap support for Q5F425 as seed ortholog is 98%.

Group of orthologs #2535. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 G.gallus:312

H2XW62              	100.00%		F1NMX8              	100.00%
Bootstrap support for H2XW62 as seed ortholog is 100%.
Bootstrap support for F1NMX8 as seed ortholog is 100%.

Group of orthologs #2536. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 G.gallus:312

H2XN98              	100.00%		H9KZD9              	100.00%
Bootstrap support for H2XN98 as seed ortholog is 100%.
Bootstrap support for H9KZD9 as seed ortholog is 100%.

Group of orthologs #2537. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 G.gallus:312

Q68A28              	100.00%		P0CB50              	100.00%
Bootstrap support for Q68A28 as seed ortholog is 100%.
Bootstrap support for P0CB50 as seed ortholog is 100%.

Group of orthologs #2538. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 G.gallus:311

F6U4B7              	100.00%		F1NYA5              	100.00%
                    	       		E1C8J2              	31.97%
                    	       		F1NDY2              	12.08%
Bootstrap support for F6U4B7 as seed ortholog is 100%.
Bootstrap support for F1NYA5 as seed ortholog is 100%.

Group of orthologs #2539. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 G.gallus:311

H2Y3J8              	100.00%		Q3KTM2              	100.00%
                    	       		F1NRU6              	17.67%
                    	       		E1C392              	16.58%
Bootstrap support for H2Y3J8 as seed ortholog is 100%.
Bootstrap support for Q3KTM2 as seed ortholog is 100%.

Group of orthologs #2540. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 G.gallus:311

F6QZM4              	100.00%		F1NV52              	100.00%
                    	       		E1BW49              	46.96%
Bootstrap support for F6QZM4 as seed ortholog is 52%.
Alternative seed ortholog is H2XP52 (7 bits away from this cluster)
Bootstrap support for F1NV52 as seed ortholog is 100%.

Group of orthologs #2541. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 G.gallus:73

F6SS10              	100.00%		F1NWX6              	100.00%
                    	       		F1P302              	10.55%
Bootstrap support for F6SS10 as seed ortholog is 100%.
Bootstrap support for F1NWX6 as seed ortholog is 87%.

Group of orthologs #2542. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 G.gallus:311

H2XW51              	100.00%		F1NL35              	100.00%
                    	       		E1BYI1              	23.26%
Bootstrap support for H2XW51 as seed ortholog is 100%.
Bootstrap support for F1NL35 as seed ortholog is 100%.

Group of orthologs #2543. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 G.gallus:311

F6UGT8              	100.00%		F1NJ81              	100.00%
Bootstrap support for F6UGT8 as seed ortholog is 100%.
Bootstrap support for F1NJ81 as seed ortholog is 100%.

Group of orthologs #2544. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 G.gallus:175

F6W7N8              	100.00%		F1NXK4              	100.00%
Bootstrap support for F6W7N8 as seed ortholog is 100%.
Bootstrap support for F1NXK4 as seed ortholog is 99%.

Group of orthologs #2545. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 G.gallus:311

F6PM34              	100.00%		Q5ZKG2              	100.00%
Bootstrap support for F6PM34 as seed ortholog is 100%.
Bootstrap support for Q5ZKG2 as seed ortholog is 100%.

Group of orthologs #2546. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 G.gallus:123

H2XRX5              	100.00%		E1C4L7              	100.00%
Bootstrap support for H2XRX5 as seed ortholog is 100%.
Bootstrap support for E1C4L7 as seed ortholog is 100%.

Group of orthologs #2547. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 G.gallus:311

F6Q4X5              	100.00%		Q8UWG7              	100.00%
Bootstrap support for F6Q4X5 as seed ortholog is 100%.
Bootstrap support for Q8UWG7 as seed ortholog is 100%.

Group of orthologs #2548. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 G.gallus:311

F6ZT40              	100.00%		F1NWC8              	100.00%
Bootstrap support for F6ZT40 as seed ortholog is 100%.
Bootstrap support for F1NWC8 as seed ortholog is 100%.

Group of orthologs #2549. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 G.gallus:311

H2XPD8              	100.00%		F1P2H4              	100.00%
Bootstrap support for H2XPD8 as seed ortholog is 100%.
Bootstrap support for F1P2H4 as seed ortholog is 100%.

Group of orthologs #2550. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 G.gallus:154

H2Y040              	100.00%		F1NN08              	100.00%
Bootstrap support for H2Y040 as seed ortholog is 77%.
Bootstrap support for F1NN08 as seed ortholog is 100%.

Group of orthologs #2551. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 G.gallus:311

H2XXM9              	100.00%		Q5ZI32              	100.00%
Bootstrap support for H2XXM9 as seed ortholog is 100%.
Bootstrap support for Q5ZI32 as seed ortholog is 100%.

Group of orthologs #2552. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 G.gallus:59

F6QQE0              	100.00%		P15988              	100.00%
                    	       		P20785              	18.08%
Bootstrap support for F6QQE0 as seed ortholog is 100%.
Bootstrap support for P15988 as seed ortholog is 47%.
Alternative seed ortholog is F1NSR4 (59 bits away from this cluster)

Group of orthologs #2553. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 G.gallus:310

F6XH93              	100.00%		F1NKY8              	100.00%
Bootstrap support for F6XH93 as seed ortholog is 100%.
Bootstrap support for F1NKY8 as seed ortholog is 100%.

Group of orthologs #2554. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 G.gallus:92

F7AK90              	100.00%		F1P1L8              	100.00%
F7BHT5              	89.35%		F1P1L7              	20.05%
                    	       		E1BTH3              	13.90%
                    	       		O73790              	10.71%
                    	       		E1BTF2              	6.61%
                    	       		P01014              	5.47%
Bootstrap support for F7AK90 as seed ortholog is 95%.
Bootstrap support for F1P1L8 as seed ortholog is 99%.

Group of orthologs #2555. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 G.gallus:124

H2Y0Z7              	100.00%		F1NT18              	100.00%
H2XPY7              	62.41%		E1BVB6              	48.48%
H2Y2K3              	53.81%		
H2XVE2              	28.29%		
Bootstrap support for H2Y0Z7 as seed ortholog is 99%.
Bootstrap support for F1NT18 as seed ortholog is 99%.

Group of orthologs #2556. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 G.gallus:225

F6QST8              	100.00%		Q5ZHY2              	100.00%
                    	       		Q5ZL80              	9.71%
Bootstrap support for F6QST8 as seed ortholog is 100%.
Bootstrap support for Q5ZHY2 as seed ortholog is 100%.

Group of orthologs #2557. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 G.gallus:309

F6SMS0              	100.00%		E1BQZ5              	100.00%
Bootstrap support for F6SMS0 as seed ortholog is 100%.
Bootstrap support for E1BQZ5 as seed ortholog is 100%.

Group of orthologs #2558. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 G.gallus:309

F6RAN6              	100.00%		F1N832              	100.00%
Bootstrap support for F6RAN6 as seed ortholog is 100%.
Bootstrap support for F1N832 as seed ortholog is 100%.

Group of orthologs #2559. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 G.gallus:98

F6S146              	100.00%		F1NK04              	100.00%
Bootstrap support for F6S146 as seed ortholog is 97%.
Bootstrap support for F1NK04 as seed ortholog is 98%.

Group of orthologs #2560. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:176

F6YU98              	100.00%		F1NTT5              	100.00%
Bootstrap support for F6YU98 as seed ortholog is 100%.
Bootstrap support for F1NTT5 as seed ortholog is 100%.

Group of orthologs #2561. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 G.gallus:121

F6U088              	100.00%		Q5F464              	100.00%
Bootstrap support for F6U088 as seed ortholog is 100%.
Bootstrap support for Q5F464 as seed ortholog is 99%.

Group of orthologs #2562. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 G.gallus:239

F6VIB4              	100.00%		Q5ZHY3              	100.00%
Bootstrap support for F6VIB4 as seed ortholog is 100%.
Bootstrap support for Q5ZHY3 as seed ortholog is 100%.

Group of orthologs #2563. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 G.gallus:309

H2XY83              	100.00%		F1NTR0              	100.00%
Bootstrap support for H2XY83 as seed ortholog is 100%.
Bootstrap support for F1NTR0 as seed ortholog is 100%.

Group of orthologs #2564. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 G.gallus:77

H2XN55              	100.00%		F1N9Z9              	100.00%
F6VY95              	45.53%		E1C6U2              	7.01%
F6T072              	33.14%		
F6T0A0              	19.61%		
F6R7P6              	19.04%		
H2XSN4              	9.52%		
F6T090              	9.17%		
Bootstrap support for H2XN55 as seed ortholog is 96%.
Bootstrap support for F1N9Z9 as seed ortholog is 92%.

Group of orthologs #2565. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 G.gallus:223

F6ZM98              	100.00%		E1BZB0              	100.00%
                    	       		E1BVT2              	18.42%
Bootstrap support for F6ZM98 as seed ortholog is 100%.
Bootstrap support for E1BZB0 as seed ortholog is 99%.

Group of orthologs #2566. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 G.gallus:145

F6TYN3              	100.00%		F1NGS7              	100.00%
                    	       		P49702              	61.11%
Bootstrap support for F6TYN3 as seed ortholog is 92%.
Bootstrap support for F1NGS7 as seed ortholog is 100%.

Group of orthologs #2567. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 G.gallus:308

F6Q3L6              	100.00%		Q5ZML4              	100.00%
                    	       		E1C4L6              	20.82%
Bootstrap support for F6Q3L6 as seed ortholog is 100%.
Bootstrap support for Q5ZML4 as seed ortholog is 100%.

Group of orthologs #2568. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 G.gallus:308

F6R407              	100.00%		E1BZ33              	100.00%
Bootstrap support for F6R407 as seed ortholog is 100%.
Bootstrap support for E1BZ33 as seed ortholog is 100%.

Group of orthologs #2569. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 G.gallus:308

F6PZD7              	100.00%		F1NEZ7              	100.00%
Bootstrap support for F6PZD7 as seed ortholog is 100%.
Bootstrap support for F1NEZ7 as seed ortholog is 100%.

Group of orthologs #2570. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 G.gallus:308

H2XLX0              	100.00%		E1BWK7              	100.00%
Bootstrap support for H2XLX0 as seed ortholog is 100%.
Bootstrap support for E1BWK7 as seed ortholog is 100%.

Group of orthologs #2571. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 G.gallus:212

H2XPL6              	100.00%		E1C4I9              	100.00%
Bootstrap support for H2XPL6 as seed ortholog is 100%.
Bootstrap support for E1C4I9 as seed ortholog is 100%.

Group of orthologs #2572. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 G.gallus:308

H2XXM2              	100.00%		F1NC85              	100.00%
Bootstrap support for H2XXM2 as seed ortholog is 100%.
Bootstrap support for F1NC85 as seed ortholog is 100%.

Group of orthologs #2573. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 G.gallus:78

F6RRU7              	100.00%		F1NF49              	100.00%
F6RLA4              	50.87%		F1NX42              	62.54%
                    	       		E1C7K2              	6.13%
Bootstrap support for F6RRU7 as seed ortholog is 56%.
Alternative seed ortholog is F6TR93 (18 bits away from this cluster)
Bootstrap support for F1NF49 as seed ortholog is 93%.

Group of orthologs #2574. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:61

Q4H2X6              	100.00%		F1NHW8              	100.00%
                    	       		F1NX54              	44.46%
                    	       		Q9I878              	36.97%
                    	       		H9L323              	26.58%
Bootstrap support for Q4H2X6 as seed ortholog is 100%.
Bootstrap support for F1NHW8 as seed ortholog is 96%.

Group of orthologs #2575. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:164

H2Y1M2              	100.00%		E1C3Z4              	100.00%
                    	       		F1P3K6              	14.55%
                    	       		E1C6P9              	9.95%
Bootstrap support for H2Y1M2 as seed ortholog is 100%.
Bootstrap support for E1C3Z4 as seed ortholog is 100%.

Group of orthologs #2576. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 G.gallus:107

F6ZSP8              	100.00%		F1NC31              	100.00%
                    	       		F1NSV2              	20.97%
Bootstrap support for F6ZSP8 as seed ortholog is 71%.
Alternative seed ortholog is F6TMW8 (23 bits away from this cluster)
Bootstrap support for F1NC31 as seed ortholog is 99%.

Group of orthologs #2577. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:307

C4B8X1              	100.00%		E1BX67              	100.00%
Bootstrap support for C4B8X1 as seed ortholog is 100%.
Bootstrap support for E1BX67 as seed ortholog is 100%.

Group of orthologs #2578. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 G.gallus:112

F6W872              	100.00%		E1BUI1              	100.00%
Bootstrap support for F6W872 as seed ortholog is 100%.
Bootstrap support for E1BUI1 as seed ortholog is 99%.

Group of orthologs #2579. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:307

F6RRD5              	100.00%		E1C8A2              	100.00%
Bootstrap support for F6RRD5 as seed ortholog is 100%.
Bootstrap support for E1C8A2 as seed ortholog is 100%.

Group of orthologs #2580. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:307

F6TB52              	100.00%		F1NG53              	100.00%
Bootstrap support for F6TB52 as seed ortholog is 100%.
Bootstrap support for F1NG53 as seed ortholog is 100%.

Group of orthologs #2581. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:307

F6RGF8              	100.00%		F1NQI2              	100.00%
Bootstrap support for F6RGF8 as seed ortholog is 100%.
Bootstrap support for F1NQI2 as seed ortholog is 100%.

Group of orthologs #2582. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 G.gallus:307

F6PP61              	100.00%		H9L0U6              	100.00%
Bootstrap support for F6PP61 as seed ortholog is 100%.
Bootstrap support for H9L0U6 as seed ortholog is 100%.

Group of orthologs #2583. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:307

F6YI87              	100.00%		F1NG62              	100.00%
Bootstrap support for F6YI87 as seed ortholog is 100%.
Bootstrap support for F1NG62 as seed ortholog is 100%.

Group of orthologs #2584. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:154

F6Y9R7              	100.00%		F1NI66              	100.00%
Bootstrap support for F6Y9R7 as seed ortholog is 100%.
Bootstrap support for F1NI66 as seed ortholog is 99%.

Group of orthologs #2585. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:240

F6TLE4              	100.00%		F1NZ90              	100.00%
Bootstrap support for F6TLE4 as seed ortholog is 100%.
Bootstrap support for F1NZ90 as seed ortholog is 100%.

Group of orthologs #2586. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:307

F7AQ62              	100.00%		F1NMD2              	100.00%
Bootstrap support for F7AQ62 as seed ortholog is 100%.
Bootstrap support for F1NMD2 as seed ortholog is 100%.

Group of orthologs #2587. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 G.gallus:307

F6YYA5              	100.00%		Q5ZIR4              	100.00%
Bootstrap support for F6YYA5 as seed ortholog is 100%.
Bootstrap support for Q5ZIR4 as seed ortholog is 100%.

Group of orthologs #2588. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 G.gallus:307

F7AFK8              	100.00%		Q9PTJ6              	100.00%
Bootstrap support for F7AFK8 as seed ortholog is 100%.
Bootstrap support for Q9PTJ6 as seed ortholog is 100%.

Group of orthologs #2589. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 G.gallus:306

F6TI40              	100.00%		F1N9S0              	100.00%
H2XMY4              	6.11%		
Bootstrap support for F6TI40 as seed ortholog is 100%.
Bootstrap support for F1N9S0 as seed ortholog is 100%.

Group of orthologs #2590. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 G.gallus:195

F6VPC4              	100.00%		F1NE82              	100.00%
                    	       		P36197              	25.32%
Bootstrap support for F6VPC4 as seed ortholog is 100%.
Bootstrap support for F1NE82 as seed ortholog is 100%.

Group of orthologs #2591. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 G.gallus:306

F7AKV8              	100.00%		F1NNU8              	100.00%
                    	       		E1C6G3              	25.89%
Bootstrap support for F7AKV8 as seed ortholog is 100%.
Bootstrap support for F1NNU8 as seed ortholog is 100%.

Group of orthologs #2592. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 G.gallus:306

F6TVS6              	100.00%		F1NB70              	100.00%
Bootstrap support for F6TVS6 as seed ortholog is 100%.
Bootstrap support for F1NB70 as seed ortholog is 100%.

Group of orthologs #2593. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 G.gallus:306

F6ZU45              	100.00%		E1C3U3              	100.00%
Bootstrap support for F6ZU45 as seed ortholog is 100%.
Bootstrap support for E1C3U3 as seed ortholog is 100%.

Group of orthologs #2594. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 G.gallus:306

F6WUH0              	100.00%		F1ND23              	100.00%
Bootstrap support for F6WUH0 as seed ortholog is 100%.
Bootstrap support for F1ND23 as seed ortholog is 100%.

Group of orthologs #2595. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 G.gallus:306

F6Z5W5              	100.00%		F1NBM0              	100.00%
Bootstrap support for F6Z5W5 as seed ortholog is 100%.
Bootstrap support for F1NBM0 as seed ortholog is 100%.

Group of orthologs #2596. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 G.gallus:306

F6QWW6              	100.00%		F1P520              	100.00%
Bootstrap support for F6QWW6 as seed ortholog is 100%.
Bootstrap support for F1P520 as seed ortholog is 100%.

Group of orthologs #2597. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 G.gallus:306

F6X4T0              	100.00%		F1NN16              	100.00%
Bootstrap support for F6X4T0 as seed ortholog is 100%.
Bootstrap support for F1NN16 as seed ortholog is 100%.

Group of orthologs #2598. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 G.gallus:306

F7AEF1              	100.00%		F1NCU8              	100.00%
Bootstrap support for F7AEF1 as seed ortholog is 100%.
Bootstrap support for F1NCU8 as seed ortholog is 100%.

Group of orthologs #2599. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 G.gallus:306

H2XQ81              	100.00%		F1N963              	100.00%
Bootstrap support for H2XQ81 as seed ortholog is 100%.
Bootstrap support for F1N963 as seed ortholog is 100%.

Group of orthologs #2600. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 G.gallus:306

F6U182              	100.00%		Q5F495              	100.00%
Bootstrap support for F6U182 as seed ortholog is 100%.
Bootstrap support for Q5F495 as seed ortholog is 100%.

Group of orthologs #2601. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 G.gallus:306

F6UK51              	100.00%		Q5ZKF5              	100.00%
Bootstrap support for F6UK51 as seed ortholog is 100%.
Bootstrap support for Q5ZKF5 as seed ortholog is 100%.

Group of orthologs #2602. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 G.gallus:306

F6ZLN5              	100.00%		F1P3V4              	100.00%
Bootstrap support for F6ZLN5 as seed ortholog is 100%.
Bootstrap support for F1P3V4 as seed ortholog is 100%.

Group of orthologs #2603. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 G.gallus:149

H2Y1B6              	100.00%		P26990              	100.00%
Bootstrap support for H2Y1B6 as seed ortholog is 99%.
Bootstrap support for P26990 as seed ortholog is 100%.

Group of orthologs #2604. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 G.gallus:305

H2XSV6              	100.00%		F1NFN8              	100.00%
                    	       		H9KZ20              	25.56%
                    	       		F1NRQ3              	18.97%
                    	       		H9KYW7              	16.24%
Bootstrap support for H2XSV6 as seed ortholog is 100%.
Bootstrap support for F1NFN8 as seed ortholog is 100%.

Group of orthologs #2605. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 G.gallus:305

H2XRW4              	100.00%		F1NAF3              	100.00%
Bootstrap support for H2XRW4 as seed ortholog is 100%.
Bootstrap support for F1NAF3 as seed ortholog is 100%.

Group of orthologs #2606. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 G.gallus:305

Q4H3S8              	100.00%		E1C100              	100.00%
Bootstrap support for Q4H3S8 as seed ortholog is 100%.
Bootstrap support for E1C100 as seed ortholog is 100%.

Group of orthologs #2607. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 G.gallus:305

H2XW54              	100.00%		F1NIW4              	100.00%
Bootstrap support for H2XW54 as seed ortholog is 100%.
Bootstrap support for F1NIW4 as seed ortholog is 100%.

Group of orthologs #2608. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 G.gallus:305

F6XNK4              	100.00%		Q5ZIU9              	100.00%
Bootstrap support for F6XNK4 as seed ortholog is 100%.
Bootstrap support for Q5ZIU9 as seed ortholog is 100%.

Group of orthologs #2609. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 G.gallus:305

F7BHW5              	100.00%		Q5ZIE1              	100.00%
Bootstrap support for F7BHW5 as seed ortholog is 100%.
Bootstrap support for Q5ZIE1 as seed ortholog is 100%.

Group of orthologs #2610. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 G.gallus:305

H2XX78              	100.00%		F1P245              	100.00%
Bootstrap support for H2XX78 as seed ortholog is 100%.
Bootstrap support for F1P245 as seed ortholog is 100%.

Group of orthologs #2611. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 G.gallus:305

Q8HIM8              	100.00%		P18940              	100.00%
Bootstrap support for Q8HIM8 as seed ortholog is 100%.
Bootstrap support for P18940 as seed ortholog is 100%.

Group of orthologs #2612. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 G.gallus:304

F6TKL9              	100.00%		E1C4S1              	100.00%
                    	       		F1P0Q6              	19.03%
Bootstrap support for F6TKL9 as seed ortholog is 100%.
Bootstrap support for E1C4S1 as seed ortholog is 100%.

Group of orthologs #2613. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 G.gallus:224

F6X4P6              	100.00%		F1P3G3              	100.00%
                    	       		E1C627              	63.95%
Bootstrap support for F6X4P6 as seed ortholog is 100%.
Bootstrap support for F1P3G3 as seed ortholog is 100%.

Group of orthologs #2614. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 G.gallus:153

F6V2A4              	100.00%		Q5ZKY4              	100.00%
                    	       		Q5ZJ84              	25.48%
Bootstrap support for F6V2A4 as seed ortholog is 100%.
Bootstrap support for Q5ZKY4 as seed ortholog is 100%.

Group of orthologs #2615. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 G.gallus:304

F6Q1G7              	100.00%		F1NT80              	100.00%
Bootstrap support for F6Q1G7 as seed ortholog is 100%.
Bootstrap support for F1NT80 as seed ortholog is 100%.

Group of orthologs #2616. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 G.gallus:304

F6ZK09              	100.00%		E1C7C5              	100.00%
Bootstrap support for F6ZK09 as seed ortholog is 100%.
Bootstrap support for E1C7C5 as seed ortholog is 100%.

Group of orthologs #2617. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 G.gallus:304

H2Y1K5              	100.00%		E1C5Z0              	100.00%
Bootstrap support for H2Y1K5 as seed ortholog is 100%.
Bootstrap support for E1C5Z0 as seed ortholog is 100%.

Group of orthologs #2618. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 G.gallus:68

F7AG96              	100.00%		Q5ZLG1              	100.00%
Bootstrap support for F7AG96 as seed ortholog is 100%.
Bootstrap support for Q5ZLG1 as seed ortholog is 99%.

Group of orthologs #2619. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:303

F6YZB7              	100.00%		F1NMN9              	100.00%
F6Q7A1              	56.20%		Q805B1              	17.33%
F7BIZ0              	24.30%		
F6VZ78              	21.52%		
Bootstrap support for F6YZB7 as seed ortholog is 99%.
Bootstrap support for F1NMN9 as seed ortholog is 100%.

Group of orthologs #2620. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 G.gallus:74

F6YVH4              	100.00%		P79760              	100.00%
                    	       		P79761              	70.33%
Bootstrap support for F6YVH4 as seed ortholog is 94%.
Bootstrap support for P79760 as seed ortholog is 94%.

Group of orthologs #2621. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:135

F6XND0              	100.00%		D2D3P4              	100.00%
Bootstrap support for F6XND0 as seed ortholog is 99%.
Bootstrap support for D2D3P4 as seed ortholog is 100%.

Group of orthologs #2622. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:131

F7AN60              	100.00%		E1BTU5              	100.00%
Bootstrap support for F7AN60 as seed ortholog is 99%.
Bootstrap support for E1BTU5 as seed ortholog is 99%.

Group of orthologs #2623. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 G.gallus:303

F6ZGT8              	100.00%		E1BZH7              	100.00%
Bootstrap support for F6ZGT8 as seed ortholog is 100%.
Bootstrap support for E1BZH7 as seed ortholog is 100%.

Group of orthologs #2624. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 G.gallus:303

H2XZJ6              	100.00%		F1NKY0              	100.00%
Bootstrap support for H2XZJ6 as seed ortholog is 100%.
Bootstrap support for F1NKY0 as seed ortholog is 100%.

Group of orthologs #2625. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 G.gallus:135

F6UTN2              	100.00%		F1NYT3              	100.00%
                    	       		E1BYN1              	83.35%
                    	       		F1NK87              	23.97%
Bootstrap support for F6UTN2 as seed ortholog is 82%.
Bootstrap support for F1NYT3 as seed ortholog is 99%.

Group of orthologs #2626. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 G.gallus:302

F6QDX7              	100.00%		E1C0B0              	100.00%
                    	       		P53760              	19.72%
Bootstrap support for F6QDX7 as seed ortholog is 100%.
Bootstrap support for E1C0B0 as seed ortholog is 100%.

Group of orthologs #2627. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 G.gallus:228

F6T453              	100.00%		F1P4N0              	100.00%
                    	       		P43449              	12.39%
Bootstrap support for F6T453 as seed ortholog is 100%.
Bootstrap support for F1P4N0 as seed ortholog is 100%.

Group of orthologs #2628. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:101

H2Y3H5              	100.00%		Q5ZHX1              	100.00%
                    	       		F1NSA8              	64.62%
Bootstrap support for H2Y3H5 as seed ortholog is 100%.
Bootstrap support for Q5ZHX1 as seed ortholog is 100%.

Group of orthologs #2629. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 G.gallus:302

F6Q4K7              	100.00%		F1NB02              	100.00%
Bootstrap support for F6Q4K7 as seed ortholog is 100%.
Bootstrap support for F1NB02 as seed ortholog is 100%.

Group of orthologs #2630. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 G.gallus:302

H2XSG4              	100.00%		F1NEN3              	100.00%
Bootstrap support for H2XSG4 as seed ortholog is 100%.
Bootstrap support for F1NEN3 as seed ortholog is 100%.

Group of orthologs #2631. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 G.gallus:33

F7BKD9              	100.00%		F1P5C7              	100.00%
Bootstrap support for F7BKD9 as seed ortholog is 100%.
Bootstrap support for F1P5C7 as seed ortholog is 86%.

Group of orthologs #2632. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 G.gallus:302

F6XPD3              	100.00%		Q90979              	100.00%
Bootstrap support for F6XPD3 as seed ortholog is 100%.
Bootstrap support for Q90979 as seed ortholog is 100%.

Group of orthologs #2633. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 G.gallus:302

H2Y152              	100.00%		F1NLG7              	100.00%
Bootstrap support for H2Y152 as seed ortholog is 100%.
Bootstrap support for F1NLG7 as seed ortholog is 100%.

Group of orthologs #2634. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 G.gallus:302

H2XUK5              	100.00%		Q5ZKI2              	100.00%
Bootstrap support for H2XUK5 as seed ortholog is 100%.
Bootstrap support for Q5ZKI2 as seed ortholog is 100%.

Group of orthologs #2635. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 G.gallus:301

F6RP59              	100.00%		P79777              	100.00%
                    	       		F1NSW8              	31.28%
                    	       		P79778              	26.29%
Bootstrap support for F6RP59 as seed ortholog is 100%.
Bootstrap support for P79777 as seed ortholog is 100%.

Group of orthologs #2636. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 G.gallus:301

H2XUS4              	100.00%		F1NXE8              	100.00%
                    	       		F1NEA3              	26.61%
Bootstrap support for H2XUS4 as seed ortholog is 100%.
Bootstrap support for F1NXE8 as seed ortholog is 100%.

Group of orthologs #2637. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 G.gallus:301

F6Q5U4              	100.00%		F1NE58              	100.00%
Bootstrap support for F6Q5U4 as seed ortholog is 100%.
Bootstrap support for F1NE58 as seed ortholog is 100%.

Group of orthologs #2638. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 G.gallus:301

F6XBT4              	100.00%		Q5ZKK8              	100.00%
Bootstrap support for F6XBT4 as seed ortholog is 100%.
Bootstrap support for Q5ZKK8 as seed ortholog is 100%.

Group of orthologs #2639. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 G.gallus:177

H2XPS3              	100.00%		F1NWS8              	100.00%
Bootstrap support for H2XPS3 as seed ortholog is 100%.
Bootstrap support for F1NWS8 as seed ortholog is 100%.

Group of orthologs #2640. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 G.gallus:300

Q5IFL5              	100.00%		Q91998              	100.00%
                    	       		H9L0G4              	79.70%
Bootstrap support for Q5IFL5 as seed ortholog is 100%.
Bootstrap support for Q91998 as seed ortholog is 100%.

Group of orthologs #2641. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 G.gallus:300

F6PH90              	100.00%		E1C8Y6              	100.00%
Bootstrap support for F6PH90 as seed ortholog is 100%.
Bootstrap support for E1C8Y6 as seed ortholog is 100%.

Group of orthologs #2642. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 G.gallus:143

H2XKN2              	100.00%		E1C3I5              	100.00%
Bootstrap support for H2XKN2 as seed ortholog is 100%.
Bootstrap support for E1C3I5 as seed ortholog is 100%.

Group of orthologs #2643. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 G.gallus:220

F6QC45              	100.00%		Q5ZKB0              	100.00%
Bootstrap support for F6QC45 as seed ortholog is 100%.
Bootstrap support for Q5ZKB0 as seed ortholog is 100%.

Group of orthologs #2644. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 G.gallus:300

H2XSI8              	100.00%		F1NVY1              	100.00%
Bootstrap support for H2XSI8 as seed ortholog is 100%.
Bootstrap support for F1NVY1 as seed ortholog is 100%.

Group of orthologs #2645. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 G.gallus:85

F6RI21              	100.00%		P19336              	100.00%
F6RJA6              	21.94%		P28686              	6.84%
Bootstrap support for F6RI21 as seed ortholog is 73%.
Alternative seed ortholog is F7AVZ3 (25 bits away from this cluster)
Bootstrap support for P19336 as seed ortholog is 97%.

Group of orthologs #2646. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:146

F6W9T5              	100.00%		F1N8I3              	100.00%
                    	       		F1NGH2              	58.58%
Bootstrap support for F6W9T5 as seed ortholog is 100%.
Bootstrap support for F1N8I3 as seed ortholog is 99%.

Group of orthologs #2647. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 G.gallus:299

F6RHG2              	100.00%		Q5ZIL2              	100.00%
                    	       		E1C8L9              	37.65%
Bootstrap support for F6RHG2 as seed ortholog is 100%.
Bootstrap support for Q5ZIL2 as seed ortholog is 100%.

Group of orthologs #2648. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 G.gallus:182

H2XYW2              	100.00%		E1C1L6              	100.00%
                    	       		E1BQJ8              	19.75%
Bootstrap support for H2XYW2 as seed ortholog is 100%.
Bootstrap support for E1C1L6 as seed ortholog is 99%.

Group of orthologs #2649. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:299

F6ZX23              	100.00%		F1P120              	100.00%
                    	       		E1BQY2              	13.16%
Bootstrap support for F6ZX23 as seed ortholog is 100%.
Bootstrap support for F1P120 as seed ortholog is 100%.

Group of orthologs #2650. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 G.gallus:81

Q4H3F5              	100.00%		P23824              	100.00%
                    	       		P23825              	42.75%
Bootstrap support for Q4H3F5 as seed ortholog is 100%.
Bootstrap support for P23824 as seed ortholog is 97%.

Group of orthologs #2651. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 G.gallus:299

F7BMH5              	100.00%		E1BTX4              	100.00%
Bootstrap support for F7BMH5 as seed ortholog is 100%.
Bootstrap support for E1BTX4 as seed ortholog is 100%.

Group of orthologs #2652. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 G.gallus:299

F7B499              	100.00%		E1C306              	100.00%
Bootstrap support for F7B499 as seed ortholog is 100%.
Bootstrap support for E1C306 as seed ortholog is 100%.

Group of orthologs #2653. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 G.gallus:199

F6S968              	100.00%		F1NK44              	100.00%
                    	       		E1C1Z1              	22.57%
Bootstrap support for F6S968 as seed ortholog is 100%.
Bootstrap support for F1NK44 as seed ortholog is 100%.

Group of orthologs #2654. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 G.gallus:298

F6QND3              	100.00%		F1NPY4              	100.00%
Bootstrap support for F6QND3 as seed ortholog is 100%.
Bootstrap support for F1NPY4 as seed ortholog is 100%.

Group of orthologs #2655. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 G.gallus:298

F6V5I4              	100.00%		F1NY69              	100.00%
Bootstrap support for F6V5I4 as seed ortholog is 100%.
Bootstrap support for F1NY69 as seed ortholog is 100%.

Group of orthologs #2656. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 G.gallus:246

F7AE45              	100.00%		Q5ZMC3              	100.00%
Bootstrap support for F7AE45 as seed ortholog is 100%.
Bootstrap support for Q5ZMC3 as seed ortholog is 100%.

Group of orthologs #2657. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 G.gallus:37

F7AQZ5              	100.00%		F1N8H7              	100.00%
F7AR10              	78.48%		F1NU64              	100.00%
Bootstrap support for F7AQZ5 as seed ortholog is 100%.
Bootstrap support for F1N8H7 as seed ortholog is 78%.
Bootstrap support for F1NU64 as seed ortholog is 76%.

Group of orthologs #2658. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 G.gallus:297

F6U1Z4              	100.00%		E1C407              	100.00%
                    	       		F1NV80              	49.74%
Bootstrap support for F6U1Z4 as seed ortholog is 100%.
Bootstrap support for E1C407 as seed ortholog is 100%.

Group of orthologs #2659. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 G.gallus:235

F6X6Z3              	100.00%		E1C5J3              	100.00%
                    	       		E1BTJ0              	61.71%
Bootstrap support for F6X6Z3 as seed ortholog is 100%.
Bootstrap support for E1C5J3 as seed ortholog is 100%.

Group of orthologs #2660. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 G.gallus:138

H2XNI0              	100.00%		P68306              	100.00%
                    	       		P04625              	81.76%
Bootstrap support for H2XNI0 as seed ortholog is 99%.
Bootstrap support for P68306 as seed ortholog is 99%.

Group of orthologs #2661. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 G.gallus:93

F6RD45              	100.00%		E1BUC1              	100.00%
Bootstrap support for F6RD45 as seed ortholog is 100%.
Bootstrap support for E1BUC1 as seed ortholog is 97%.

Group of orthologs #2662. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 G.gallus:297

F6ZBX8              	100.00%		E1BX00              	100.00%
Bootstrap support for F6ZBX8 as seed ortholog is 100%.
Bootstrap support for E1BX00 as seed ortholog is 100%.

Group of orthologs #2663. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 G.gallus:297

F7ARU3              	100.00%		E1BTL2              	100.00%
Bootstrap support for F7ARU3 as seed ortholog is 100%.
Bootstrap support for E1BTL2 as seed ortholog is 100%.

Group of orthologs #2664. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 G.gallus:225

F6T4J3              	100.00%		F1NGQ3              	100.00%
Bootstrap support for F6T4J3 as seed ortholog is 100%.
Bootstrap support for F1NGQ3 as seed ortholog is 100%.

Group of orthologs #2665. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 G.gallus:170

H2XLJ3              	100.00%		E1BVB0              	100.00%
Bootstrap support for H2XLJ3 as seed ortholog is 100%.
Bootstrap support for E1BVB0 as seed ortholog is 100%.

Group of orthologs #2666. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 G.gallus:297

H2XQR1              	100.00%		E1BXJ6              	100.00%
Bootstrap support for H2XQR1 as seed ortholog is 100%.
Bootstrap support for E1BXJ6 as seed ortholog is 100%.

Group of orthologs #2667. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 G.gallus:297

H2XR12              	100.00%		E1BYP8              	100.00%
Bootstrap support for H2XR12 as seed ortholog is 100%.
Bootstrap support for E1BYP8 as seed ortholog is 100%.

Group of orthologs #2668. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:79

F6WB20              	100.00%		F1NUP9              	100.00%
Bootstrap support for F6WB20 as seed ortholog is 100%.
Bootstrap support for F1NUP9 as seed ortholog is 99%.

Group of orthologs #2669. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:182

H2XVE0              	100.00%		E1C1J0              	100.00%
Bootstrap support for H2XVE0 as seed ortholog is 100%.
Bootstrap support for E1C1J0 as seed ortholog is 100%.

Group of orthologs #2670. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 G.gallus:159

H2XNL6              	100.00%		F1NEV3              	100.00%
Bootstrap support for H2XNL6 as seed ortholog is 100%.
Bootstrap support for F1NEV3 as seed ortholog is 99%.

Group of orthologs #2671. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 G.gallus:297

F6U9P7              	100.00%		Q5ZI40              	100.00%
Bootstrap support for F6U9P7 as seed ortholog is 100%.
Bootstrap support for Q5ZI40 as seed ortholog is 100%.

Group of orthologs #2672. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 G.gallus:297

H2Y3F1              	100.00%		E1C1D7              	100.00%
Bootstrap support for H2Y3F1 as seed ortholog is 100%.
Bootstrap support for E1C1D7 as seed ortholog is 100%.

Group of orthologs #2673. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 G.gallus:133

H2XPE8              	100.00%		F1P281              	100.00%
Bootstrap support for H2XPE8 as seed ortholog is 100%.
Bootstrap support for F1P281 as seed ortholog is 99%.

Group of orthologs #2674. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 G.gallus:297

H2Y279              	100.00%		F1NIN3              	100.00%
Bootstrap support for H2Y279 as seed ortholog is 67%.
Alternative seed ortholog is F6SGU7 (17 bits away from this cluster)
Bootstrap support for F1NIN3 as seed ortholog is 100%.

Group of orthologs #2675. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 G.gallus:221

H2XZG7              	100.00%		Q6VN51              	100.00%
Bootstrap support for H2XZG7 as seed ortholog is 100%.
Bootstrap support for Q6VN51 as seed ortholog is 100%.

Group of orthologs #2676. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 G.gallus:296

F6WWW9              	100.00%		Q5ZID6              	100.00%
                    	       		Q5ZKF6              	14.64%
Bootstrap support for F6WWW9 as seed ortholog is 100%.
Bootstrap support for Q5ZID6 as seed ortholog is 100%.

Group of orthologs #2677. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 G.gallus:103

F6VY76              	100.00%		F1N908              	100.00%
Bootstrap support for F6VY76 as seed ortholog is 100%.
Bootstrap support for F1N908 as seed ortholog is 99%.

Group of orthologs #2678. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 G.gallus:237

F6ZID3              	100.00%		P39963              	100.00%
Bootstrap support for F6ZID3 as seed ortholog is 100%.
Bootstrap support for P39963 as seed ortholog is 100%.

Group of orthologs #2679. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 G.gallus:172

Q4H3J8              	100.00%		F1P4R3              	100.00%
                    	       		E1C1I0              	43.64%
                    	       		E1BRY7              	36.99%
Bootstrap support for Q4H3J8 as seed ortholog is 100%.
Bootstrap support for F1P4R3 as seed ortholog is 100%.

Group of orthologs #2680. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 G.gallus:295

F6U8F3              	100.00%		F1NEM2              	100.00%
Bootstrap support for F6U8F3 as seed ortholog is 100%.
Bootstrap support for F1NEM2 as seed ortholog is 100%.

Group of orthologs #2681. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 G.gallus:295

F6Z0U1              	100.00%		F1NAY8              	100.00%
Bootstrap support for F6Z0U1 as seed ortholog is 100%.
Bootstrap support for F1NAY8 as seed ortholog is 100%.

Group of orthologs #2682. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 G.gallus:295

F6PPH5              	100.00%		Q5ZIN1              	100.00%
Bootstrap support for F6PPH5 as seed ortholog is 100%.
Bootstrap support for Q5ZIN1 as seed ortholog is 100%.

Group of orthologs #2683. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 G.gallus:295

F6ZJB9              	100.00%		F1P3U1              	100.00%
Bootstrap support for F6ZJB9 as seed ortholog is 100%.
Bootstrap support for F1P3U1 as seed ortholog is 100%.

Group of orthologs #2684. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 G.gallus:295

H2XS91              	100.00%		F1NZA8              	100.00%
Bootstrap support for H2XS91 as seed ortholog is 100%.
Bootstrap support for F1NZA8 as seed ortholog is 100%.

Group of orthologs #2685. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:45

F6VVP4              	100.00%		Q90660              	100.00%
F6PS87              	33.20%		
F6VVK4              	28.40%		
F7BMK2              	13.26%		
Bootstrap support for F6VVP4 as seed ortholog is 99%.
Bootstrap support for Q90660 as seed ortholog is 72%.
Alternative seed ortholog is Q8UVF8 (45 bits away from this cluster)

Group of orthologs #2686. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 G.gallus:294

F6XKZ6              	100.00%		B3TZB3              	100.00%
Bootstrap support for F6XKZ6 as seed ortholog is 100%.
Bootstrap support for B3TZB3 as seed ortholog is 100%.

Group of orthologs #2687. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 G.gallus:294

F6SNL0              	100.00%		E1C3K3              	100.00%
Bootstrap support for F6SNL0 as seed ortholog is 100%.
Bootstrap support for E1C3K3 as seed ortholog is 100%.

Group of orthologs #2688. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 G.gallus:294

F7BD35              	100.00%		E1BT22              	100.00%
Bootstrap support for F7BD35 as seed ortholog is 100%.
Bootstrap support for E1BT22 as seed ortholog is 100%.

Group of orthologs #2689. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 G.gallus:294

F6XIK1              	100.00%		E1C9C3              	100.00%
Bootstrap support for F6XIK1 as seed ortholog is 100%.
Bootstrap support for E1C9C3 as seed ortholog is 100%.

Group of orthologs #2690. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 G.gallus:294

H2XU41              	100.00%		E1BR10              	100.00%
Bootstrap support for H2XU41 as seed ortholog is 100%.
Bootstrap support for E1BR10 as seed ortholog is 100%.

Group of orthologs #2691. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 G.gallus:294

F6W074              	100.00%		F1NN95              	100.00%
Bootstrap support for F6W074 as seed ortholog is 100%.
Bootstrap support for F1NN95 as seed ortholog is 100%.

Group of orthologs #2692. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 G.gallus:66

H2XQ24              	100.00%		F1NBL5              	100.00%
Bootstrap support for H2XQ24 as seed ortholog is 99%.
Bootstrap support for F1NBL5 as seed ortholog is 96%.

Group of orthologs #2693. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 G.gallus:46

F6ZUD7              	100.00%		F1NY02              	100.00%
Bootstrap support for F6ZUD7 as seed ortholog is 100%.
Bootstrap support for F1NY02 as seed ortholog is 91%.

Group of orthologs #2694. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 G.gallus:230

H2XYH1              	100.00%		F1NCM5              	100.00%
F7AAN8              	52.42%		
Bootstrap support for H2XYH1 as seed ortholog is 100%.
Bootstrap support for F1NCM5 as seed ortholog is 100%.

Group of orthologs #2695. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:93

F6S6V5              	100.00%		F1N9A3              	100.00%
Bootstrap support for F6S6V5 as seed ortholog is 99%.
Bootstrap support for F1N9A3 as seed ortholog is 100%.

Group of orthologs #2696. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 G.gallus:190

F6YGF8              	100.00%		E1BUV1              	100.00%
Bootstrap support for F6YGF8 as seed ortholog is 100%.
Bootstrap support for E1BUV1 as seed ortholog is 100%.

Group of orthologs #2697. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 G.gallus:293

F6R012              	100.00%		F1NER5              	100.00%
Bootstrap support for F6R012 as seed ortholog is 100%.
Bootstrap support for F1NER5 as seed ortholog is 100%.

Group of orthologs #2698. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 G.gallus:293

F6RWY1              	100.00%		F1NMA9              	100.00%
Bootstrap support for F6RWY1 as seed ortholog is 100%.
Bootstrap support for F1NMA9 as seed ortholog is 100%.

Group of orthologs #2699. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 G.gallus:293

F6PH23              	100.00%		F1P3S9              	100.00%
Bootstrap support for F6PH23 as seed ortholog is 100%.
Bootstrap support for F1P3S9 as seed ortholog is 100%.

Group of orthologs #2700. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 G.gallus:293

H2XP13              	100.00%		F1NP94              	100.00%
Bootstrap support for H2XP13 as seed ortholog is 100%.
Bootstrap support for F1NP94 as seed ortholog is 100%.

Group of orthologs #2701. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 G.gallus:292

F7B369              	100.00%		F1NVL0              	100.00%
                    	       		H9L0D8              	11.35%
Bootstrap support for F7B369 as seed ortholog is 100%.
Bootstrap support for F1NVL0 as seed ortholog is 100%.

Group of orthologs #2702. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 G.gallus:292

C4B8X6              	100.00%		E1C7G6              	100.00%
Bootstrap support for C4B8X6 as seed ortholog is 100%.
Bootstrap support for E1C7G6 as seed ortholog is 100%.

Group of orthologs #2703. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 G.gallus:292

F6TXZ0              	100.00%		E1BZK9              	100.00%
Bootstrap support for F6TXZ0 as seed ortholog is 100%.
Bootstrap support for E1BZK9 as seed ortholog is 100%.

Group of orthologs #2704. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 G.gallus:292

F6QRX3              	100.00%		F1NG33              	100.00%
Bootstrap support for F6QRX3 as seed ortholog is 100%.
Bootstrap support for F1NG33 as seed ortholog is 100%.

Group of orthologs #2705. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 G.gallus:292

F6XGT9              	100.00%		F1N9P8              	100.00%
Bootstrap support for F6XGT9 as seed ortholog is 100%.
Bootstrap support for F1N9P8 as seed ortholog is 100%.

Group of orthologs #2706. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 G.gallus:292

F7ADV8              	100.00%		F1NJ49              	100.00%
Bootstrap support for F7ADV8 as seed ortholog is 100%.
Bootstrap support for F1NJ49 as seed ortholog is 100%.

Group of orthologs #2707. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 G.gallus:292

H2XQU6              	100.00%		F1N9P7              	100.00%
Bootstrap support for H2XQU6 as seed ortholog is 99%.
Bootstrap support for F1N9P7 as seed ortholog is 100%.

Group of orthologs #2708. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 G.gallus:292

F7AHV7              	100.00%		F1NSS6              	100.00%
Bootstrap support for F7AHV7 as seed ortholog is 100%.
Bootstrap support for F1NSS6 as seed ortholog is 100%.

Group of orthologs #2709. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 G.gallus:184

F6VCD8              	100.00%		Q5ZML3              	100.00%
Bootstrap support for F6VCD8 as seed ortholog is 100%.
Bootstrap support for Q5ZML3 as seed ortholog is 100%.

Group of orthologs #2710. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 G.gallus:189

F6ZKW1              	100.00%		P42558              	100.00%
Bootstrap support for F6ZKW1 as seed ortholog is 100%.
Bootstrap support for P42558 as seed ortholog is 100%.

Group of orthologs #2711. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 G.gallus:292

H2XVM6              	100.00%		F1P3Q5              	100.00%
Bootstrap support for H2XVM6 as seed ortholog is 100%.
Bootstrap support for F1P3Q5 as seed ortholog is 100%.

Group of orthologs #2712. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 G.gallus:202

F6PTH0              	100.00%		Q71R50              	100.00%
F6PTW3              	47.14%		
F6PUC9              	33.81%		
F6RPI4              	32.86%		
F6RPK0              	18.57%		
Bootstrap support for F6PTH0 as seed ortholog is 100%.
Bootstrap support for Q71R50 as seed ortholog is 100%.

Group of orthologs #2713. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:84

F6S1J5              	100.00%		E1C102              	100.00%
                    	       		Q5F345              	18.35%
Bootstrap support for F6S1J5 as seed ortholog is 96%.
Bootstrap support for E1C102 as seed ortholog is 99%.

Group of orthologs #2714. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:63

F6PK93              	100.00%		F1NU22              	100.00%
F6UPT3              	16.78%		
Bootstrap support for F6PK93 as seed ortholog is 96%.
Bootstrap support for F1NU22 as seed ortholog is 93%.

Group of orthologs #2715. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 G.gallus:291

F6YWI2              	100.00%		E1BTS4              	100.00%
Bootstrap support for F6YWI2 as seed ortholog is 100%.
Bootstrap support for E1BTS4 as seed ortholog is 100%.

Group of orthologs #2716. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 G.gallus:291

F6ZQ58              	100.00%		E1BV29              	100.00%
Bootstrap support for F6ZQ58 as seed ortholog is 100%.
Bootstrap support for E1BV29 as seed ortholog is 100%.

Group of orthologs #2717. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 G.gallus:124

F6QIM1              	100.00%		F1NLM7              	100.00%
Bootstrap support for F6QIM1 as seed ortholog is 100%.
Bootstrap support for F1NLM7 as seed ortholog is 100%.

Group of orthologs #2718. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 G.gallus:291

F6RXF3              	100.00%		F1NIS3              	100.00%
Bootstrap support for F6RXF3 as seed ortholog is 100%.
Bootstrap support for F1NIS3 as seed ortholog is 100%.

Group of orthologs #2719. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 G.gallus:291

H2XVN4              	100.00%		F1NGC7              	100.00%
Bootstrap support for H2XVN4 as seed ortholog is 100%.
Bootstrap support for F1NGC7 as seed ortholog is 100%.

Group of orthologs #2720. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 G.gallus:291

F7A9N7              	100.00%		O42393              	100.00%
Bootstrap support for F7A9N7 as seed ortholog is 100%.
Bootstrap support for O42393 as seed ortholog is 100%.

Group of orthologs #2721. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:291

H2XNN8              	100.00%		F1P0Z4              	100.00%
Bootstrap support for H2XNN8 as seed ortholog is 100%.
Bootstrap support for F1P0Z4 as seed ortholog is 100%.

Group of orthologs #2722. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 G.gallus:290

H2XM76              	100.00%		E1BUB3              	100.00%
                    	       		E1C2L8              	71.48%
                    	       		H9KZF2              	48.02%
                    	       		H9L0P9              	44.46%
Bootstrap support for H2XM76 as seed ortholog is 100%.
Bootstrap support for E1BUB3 as seed ortholog is 100%.

Group of orthologs #2723. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 G.gallus:290

F6X0N8              	100.00%		F1NAZ9              	100.00%
L7N0S6              	63.51%		F1NHX6              	100.00%
Bootstrap support for F6X0N8 as seed ortholog is 100%.
Bootstrap support for F1NAZ9 as seed ortholog is 100%.
Bootstrap support for F1NHX6 as seed ortholog is 100%.

Group of orthologs #2724. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:112

F6SBR0              	100.00%		E1BQI2              	100.00%
                    	       		F1P072              	100.00%
Bootstrap support for F6SBR0 as seed ortholog is 100%.
Bootstrap support for E1BQI2 as seed ortholog is 100%.
Bootstrap support for F1P072 as seed ortholog is 100%.

Group of orthologs #2725. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 G.gallus:290

F7APD9              	100.00%		Q5ZL23              	100.00%
                    	       		E1BX44              	18.77%
Bootstrap support for F7APD9 as seed ortholog is 100%.
Bootstrap support for Q5ZL23 as seed ortholog is 100%.

Group of orthologs #2726. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 G.gallus:290

F6RIG9              	100.00%		E1C2F2              	100.00%
Bootstrap support for F6RIG9 as seed ortholog is 100%.
Bootstrap support for E1C2F2 as seed ortholog is 100%.

Group of orthologs #2727. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 G.gallus:290

F6ZYE8              	100.00%		E1BWF2              	100.00%
Bootstrap support for F6ZYE8 as seed ortholog is 100%.
Bootstrap support for E1BWF2 as seed ortholog is 100%.

Group of orthologs #2728. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 G.gallus:290

F7B9W5              	100.00%		E1C065              	100.00%
Bootstrap support for F7B9W5 as seed ortholog is 100%.
Bootstrap support for E1C065 as seed ortholog is 100%.

Group of orthologs #2729. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 G.gallus:290

F6WHP2              	100.00%		F1NF79              	100.00%
Bootstrap support for F6WHP2 as seed ortholog is 100%.
Bootstrap support for F1NF79 as seed ortholog is 100%.

Group of orthologs #2730. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 G.gallus:166

H2XV16              	100.00%		E1BUH4              	100.00%
Bootstrap support for H2XV16 as seed ortholog is 100%.
Bootstrap support for E1BUH4 as seed ortholog is 100%.

Group of orthologs #2731. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 G.gallus:202

F6WCU4              	100.00%		H9KZJ8              	100.00%
Bootstrap support for F6WCU4 as seed ortholog is 100%.
Bootstrap support for H9KZJ8 as seed ortholog is 100%.

Group of orthologs #2732. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 G.gallus:290

F6UPC7              	100.00%		Q6EE62              	100.00%
Bootstrap support for F6UPC7 as seed ortholog is 100%.
Bootstrap support for Q6EE62 as seed ortholog is 100%.

Group of orthologs #2733. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 G.gallus:30

F6X9C7              	100.00%		E1BVJ8              	100.00%
H2XY34              	14.81%		E1BY00              	11.74%
H2XPK9              	9.43%		
Bootstrap support for F6X9C7 as seed ortholog is 88%.
Bootstrap support for E1BVJ8 as seed ortholog is 63%.
Alternative seed ortholog is F1NJ03 (30 bits away from this cluster)

Group of orthologs #2734. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 G.gallus:289

F6SYP3              	100.00%		E1BSV3              	100.00%
                    	       		F1NV42              	14.38%
Bootstrap support for F6SYP3 as seed ortholog is 100%.
Bootstrap support for E1BSV3 as seed ortholog is 100%.

Group of orthologs #2735. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 G.gallus:289

F6VKX1              	100.00%		F1NMM9              	100.00%
                    	       		F1NN92              	8.15%
Bootstrap support for F6VKX1 as seed ortholog is 100%.
Bootstrap support for F1NMM9 as seed ortholog is 100%.

Group of orthologs #2736. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 G.gallus:289

Q1RL32              	100.00%		Q5ZLY5              	100.00%
                    	       		E1BSW6              	5.78%
Bootstrap support for Q1RL32 as seed ortholog is 100%.
Bootstrap support for Q5ZLY5 as seed ortholog is 100%.

Group of orthologs #2737. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 G.gallus:289

F6RZU6              	100.00%		E1BV47              	100.00%
Bootstrap support for F6RZU6 as seed ortholog is 100%.
Bootstrap support for E1BV47 as seed ortholog is 100%.

Group of orthologs #2738. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 G.gallus:289

F6XWZ8              	100.00%		E1BQX3              	100.00%
Bootstrap support for F6XWZ8 as seed ortholog is 100%.
Bootstrap support for E1BQX3 as seed ortholog is 100%.

Group of orthologs #2739. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 G.gallus:289

F6YS62              	100.00%		E1BUH7              	100.00%
Bootstrap support for F6YS62 as seed ortholog is 100%.
Bootstrap support for E1BUH7 as seed ortholog is 100%.

Group of orthologs #2740. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 G.gallus:136

F6ZX46              	100.00%		E1BSI8              	100.00%
Bootstrap support for F6ZX46 as seed ortholog is 100%.
Bootstrap support for E1BSI8 as seed ortholog is 100%.

Group of orthologs #2741. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 G.gallus:205

F6Z241              	100.00%		E1C4L1              	100.00%
Bootstrap support for F6Z241 as seed ortholog is 100%.
Bootstrap support for E1C4L1 as seed ortholog is 100%.

Group of orthologs #2742. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:74

F7B860              	100.00%		F1NDU4              	100.00%
Bootstrap support for F7B860 as seed ortholog is 95%.
Bootstrap support for F1NDU4 as seed ortholog is 99%.

Group of orthologs #2743. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 G.gallus:24

F6T2C1              	100.00%		P62149              	100.00%
Bootstrap support for F6T2C1 as seed ortholog is 45%.
Alternative seed ortholog is F6T2A6 (1 bits away from this cluster)
Bootstrap support for P62149 as seed ortholog is 99%.

Group of orthologs #2744. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 G.gallus:288

F6PPI4              	100.00%		Q9W719              	100.00%
                    	       		F1NMK0              	11.39%
                    	       		E1C5K1              	5.70%
Bootstrap support for F6PPI4 as seed ortholog is 100%.
Bootstrap support for Q9W719 as seed ortholog is 100%.

Group of orthologs #2745. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 G.gallus:140

F6ZNK2              	100.00%		F1P556              	100.00%
                    	       		F1N860              	18.84%
Bootstrap support for F6ZNK2 as seed ortholog is 98%.
Bootstrap support for F1P556 as seed ortholog is 99%.

Group of orthologs #2746. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 G.gallus:288

F6QQ08              	100.00%		E1C494              	100.00%
Bootstrap support for F6QQ08 as seed ortholog is 100%.
Bootstrap support for E1C494 as seed ortholog is 100%.

Group of orthologs #2747. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 G.gallus:224

F6XT34              	100.00%		F1NCC9              	100.00%
Bootstrap support for F6XT34 as seed ortholog is 100%.
Bootstrap support for F1NCC9 as seed ortholog is 100%.

Group of orthologs #2748. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:205

F6XIW9              	100.00%		F1NKJ6              	100.00%
Bootstrap support for F6XIW9 as seed ortholog is 99%.
Bootstrap support for F1NKJ6 as seed ortholog is 100%.

Group of orthologs #2749. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 G.gallus:288

F6YI25              	100.00%		F1NJ02              	100.00%
Bootstrap support for F6YI25 as seed ortholog is 100%.
Bootstrap support for F1NJ02 as seed ortholog is 100%.

Group of orthologs #2750. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 G.gallus:287

F7AXI1              	100.00%		F1NSD6              	100.00%
                    	       		F1NTB6              	17.80%
                    	       		F1NG58              	11.27%
Bootstrap support for F7AXI1 as seed ortholog is 100%.
Bootstrap support for F1NSD6 as seed ortholog is 100%.

Group of orthologs #2751. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:287

F6R2P7              	100.00%		E1C322              	100.00%
                    	       		E1C2V9              	30.70%
Bootstrap support for F6R2P7 as seed ortholog is 99%.
Bootstrap support for E1C322 as seed ortholog is 100%.

Group of orthologs #2752. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 G.gallus:287

F6TAD8              	100.00%		F1P3D2              	100.00%
                    	       		Q5ZJC7              	92.92%
Bootstrap support for F6TAD8 as seed ortholog is 100%.
Bootstrap support for F1P3D2 as seed ortholog is 100%.

Group of orthologs #2753. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 G.gallus:287

F6T7J7              	100.00%		F1ND91              	100.00%
Bootstrap support for F6T7J7 as seed ortholog is 100%.
Bootstrap support for F1ND91 as seed ortholog is 100%.

Group of orthologs #2754. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 G.gallus:287

F6X2Y1              	100.00%		E1C573              	100.00%
Bootstrap support for F6X2Y1 as seed ortholog is 100%.
Bootstrap support for E1C573 as seed ortholog is 100%.

Group of orthologs #2755. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 G.gallus:287

F6YN20              	100.00%		E1C170              	100.00%
Bootstrap support for F6YN20 as seed ortholog is 100%.
Bootstrap support for E1C170 as seed ortholog is 100%.

Group of orthologs #2756. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:74

F6V2M0              	100.00%		F1N9T9              	100.00%
Bootstrap support for F6V2M0 as seed ortholog is 95%.
Bootstrap support for F1N9T9 as seed ortholog is 94%.

Group of orthologs #2757. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 G.gallus:205

F6VCR2              	100.00%		F1NAM7              	100.00%
Bootstrap support for F6VCR2 as seed ortholog is 100%.
Bootstrap support for F1NAM7 as seed ortholog is 100%.

Group of orthologs #2758. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 G.gallus:170

F6WCV2              	100.00%		F1NB13              	100.00%
Bootstrap support for F6WCV2 as seed ortholog is 100%.
Bootstrap support for F1NB13 as seed ortholog is 100%.

Group of orthologs #2759. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 G.gallus:287

F6QH89              	100.00%		Q9W7K9              	100.00%
Bootstrap support for F6QH89 as seed ortholog is 99%.
Bootstrap support for Q9W7K9 as seed ortholog is 100%.

Group of orthologs #2760. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 G.gallus:287

F6ZIA7              	100.00%		Q5ZMD2              	100.00%
Bootstrap support for F6ZIA7 as seed ortholog is 100%.
Bootstrap support for Q5ZMD2 as seed ortholog is 100%.

Group of orthologs #2761. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 G.gallus:287

F7BQ69              	100.00%		Q5ZKQ7              	100.00%
Bootstrap support for F7BQ69 as seed ortholog is 100%.
Bootstrap support for Q5ZKQ7 as seed ortholog is 100%.

Group of orthologs #2762. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:287

H2XMB6              	100.00%		P63283              	100.00%
Bootstrap support for H2XMB6 as seed ortholog is 100%.
Bootstrap support for P63283 as seed ortholog is 100%.

Group of orthologs #2763. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:116

F6S855              	100.00%		F1N970              	100.00%
F6XUY3              	51.66%		
F6S880              	51.06%		
F6W3Q9              	21.75%		
Bootstrap support for F6S855 as seed ortholog is 99%.
Bootstrap support for F1N970 as seed ortholog is 99%.

Group of orthologs #2764. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 G.gallus:45

F6XD08              	100.00%		F1P1N0              	100.00%
                    	       		F1P4A9              	72.95%
Bootstrap support for F6XD08 as seed ortholog is 100%.
Bootstrap support for F1P1N0 as seed ortholog is 76%.

Group of orthologs #2765. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:286

F6WXJ5              	100.00%		E1C0M0              	100.00%
Bootstrap support for F6WXJ5 as seed ortholog is 100%.
Bootstrap support for E1C0M0 as seed ortholog is 100%.

Group of orthologs #2766. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 G.gallus:286

F6S7J0              	100.00%		F1NLG0              	100.00%
Bootstrap support for F6S7J0 as seed ortholog is 100%.
Bootstrap support for F1NLG0 as seed ortholog is 100%.

Group of orthologs #2767. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 G.gallus:286

F6X0R0              	100.00%		F1NAC8              	100.00%
Bootstrap support for F6X0R0 as seed ortholog is 100%.
Bootstrap support for F1NAC8 as seed ortholog is 100%.

Group of orthologs #2768. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 G.gallus:286

F6QVI1              	100.00%		Q5F3A1              	100.00%
Bootstrap support for F6QVI1 as seed ortholog is 100%.
Bootstrap support for Q5F3A1 as seed ortholog is 100%.

Group of orthologs #2769. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 G.gallus:205

H2XL75              	100.00%		F1NX65              	100.00%
Bootstrap support for H2XL75 as seed ortholog is 99%.
Bootstrap support for F1NX65 as seed ortholog is 100%.

Group of orthologs #2770. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 G.gallus:162

H2XQ36              	100.00%		Q5ZI20              	100.00%
Bootstrap support for H2XQ36 as seed ortholog is 99%.
Bootstrap support for Q5ZI20 as seed ortholog is 100%.

Group of orthologs #2771. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 G.gallus:285

F6X2D7              	100.00%		E1BQU9              	100.00%
                    	       		E1C744              	22.08%
                    	       		F1N8E5              	7.95%
Bootstrap support for F6X2D7 as seed ortholog is 100%.
Bootstrap support for E1BQU9 as seed ortholog is 100%.

Group of orthologs #2772. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 G.gallus:285

F6YMT8              	100.00%		E1BST8              	100.00%
Bootstrap support for F6YMT8 as seed ortholog is 100%.
Bootstrap support for E1BST8 as seed ortholog is 100%.

Group of orthologs #2773. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 G.gallus:285

F6QVW6              	100.00%		F1NEP7              	100.00%
Bootstrap support for F6QVW6 as seed ortholog is 100%.
Bootstrap support for F1NEP7 as seed ortholog is 100%.

Group of orthologs #2774. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 G.gallus:285

F6Z768              	100.00%		E1BWL3              	100.00%
Bootstrap support for F6Z768 as seed ortholog is 100%.
Bootstrap support for E1BWL3 as seed ortholog is 100%.

Group of orthologs #2775. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 G.gallus:135

F7A771              	100.00%		E1BXG0              	100.00%
Bootstrap support for F7A771 as seed ortholog is 99%.
Bootstrap support for E1BXG0 as seed ortholog is 100%.

Group of orthologs #2776. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 G.gallus:285

F6XWG9              	100.00%		E1C9E7              	100.00%
Bootstrap support for F6XWG9 as seed ortholog is 100%.
Bootstrap support for E1C9E7 as seed ortholog is 100%.

Group of orthologs #2777. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 G.gallus:285

F6SSL3              	100.00%		F1P318              	100.00%
Bootstrap support for F6SSL3 as seed ortholog is 100%.
Bootstrap support for F1P318 as seed ortholog is 100%.

Group of orthologs #2778. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 G.gallus:48

H2XJR2              	100.00%		E1C956              	100.00%
Bootstrap support for H2XJR2 as seed ortholog is 100%.
Bootstrap support for E1C956 as seed ortholog is 96%.

Group of orthologs #2779. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 G.gallus:285

F6VI10              	100.00%		F1NZ59              	100.00%
Bootstrap support for F6VI10 as seed ortholog is 100%.
Bootstrap support for F1NZ59 as seed ortholog is 100%.

Group of orthologs #2780. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 G.gallus:284

F6SA38              	100.00%		F1N8V3              	100.00%
                    	       		I6L4M8              	97.18%
                    	       		F1P1F2              	8.03%
Bootstrap support for F6SA38 as seed ortholog is 100%.
Bootstrap support for F1N8V3 as seed ortholog is 100%.

Group of orthologs #2781. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 G.gallus:284

F6SBY9              	100.00%		E1BQI9              	100.00%
Q2PEE5              	12.22%		
Bootstrap support for F6SBY9 as seed ortholog is 100%.
Bootstrap support for E1BQI9 as seed ortholog is 100%.

Group of orthologs #2782. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 G.gallus:284

F6PJ79              	100.00%		F1P508              	100.00%
                    	       		F1NL01              	12.03%
Bootstrap support for F6PJ79 as seed ortholog is 100%.
Bootstrap support for F1P508 as seed ortholog is 100%.

Group of orthologs #2783. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 G.gallus:79

F6RYU3              	100.00%		F1P2H2              	100.00%
                    	       		Q5ZJZ5              	100.00%
Bootstrap support for F6RYU3 as seed ortholog is 99%.
Bootstrap support for F1P2H2 as seed ortholog is 99%.
Bootstrap support for Q5ZJZ5 as seed ortholog is 99%.

Group of orthologs #2784. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 G.gallus:284

H2XXX4              	100.00%		Q8QHJ0              	100.00%
                    	       		F1NIM2              	38.38%
Bootstrap support for H2XXX4 as seed ortholog is 100%.
Bootstrap support for Q8QHJ0 as seed ortholog is 100%.

Group of orthologs #2785. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 G.gallus:284

F6PL73              	100.00%		E1BZ68              	100.00%
Bootstrap support for F6PL73 as seed ortholog is 100%.
Bootstrap support for E1BZ68 as seed ortholog is 100%.

Group of orthologs #2786. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 G.gallus:138

F6WJD2              	100.00%		E1BSN2              	100.00%
Bootstrap support for F6WJD2 as seed ortholog is 98%.
Bootstrap support for E1BSN2 as seed ortholog is 100%.

Group of orthologs #2787. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 G.gallus:203

F7AQH5              	100.00%		E1BQR2              	100.00%
Bootstrap support for F7AQH5 as seed ortholog is 100%.
Bootstrap support for E1BQR2 as seed ortholog is 100%.

Group of orthologs #2788. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 G.gallus:284

F6XMM6              	100.00%		H9L1C2              	100.00%
Bootstrap support for F6XMM6 as seed ortholog is 100%.
Bootstrap support for H9L1C2 as seed ortholog is 100%.

Group of orthologs #2789. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 G.gallus:284

H2XWF9              	100.00%		H9L088              	100.00%
Bootstrap support for H2XWF9 as seed ortholog is 100%.
Bootstrap support for H9L088 as seed ortholog is 100%.

Group of orthologs #2790. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 G.gallus:50

Q5SE06              	100.00%		F1NXS3              	100.00%
Bootstrap support for Q5SE06 as seed ortholog is 61%.
Alternative seed ortholog is F6VL03 (9 bits away from this cluster)
Bootstrap support for F1NXS3 as seed ortholog is 92%.

Group of orthologs #2791. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 G.gallus:183

Q4H3F7              	100.00%		Q5ZJ46              	100.00%
Bootstrap support for Q4H3F7 as seed ortholog is 100%.
Bootstrap support for Q5ZJ46 as seed ortholog is 100%.

Group of orthologs #2792. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 G.gallus:231

F6S8K9              	100.00%		P49706              	100.00%
                    	       		Q5ZKI9              	31.17%
                    	       		P55169              	29.55%
Bootstrap support for F6S8K9 as seed ortholog is 100%.
Bootstrap support for P49706 as seed ortholog is 100%.

Group of orthologs #2793. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 G.gallus:239

F6Y5B7              	100.00%		Q5ZL59              	100.00%
                    	       		F1NKS9              	29.03%
                    	       		E1BZJ2              	12.90%
Bootstrap support for F6Y5B7 as seed ortholog is 94%.
Bootstrap support for Q5ZL59 as seed ortholog is 100%.

Group of orthologs #2794. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 G.gallus:283

F6ZMG2              	100.00%		E1C3Z6              	100.00%
F6XNX3              	49.02%		
Bootstrap support for F6ZMG2 as seed ortholog is 100%.
Bootstrap support for E1C3Z6 as seed ortholog is 100%.

Group of orthologs #2795. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 G.gallus:283

F6XBS5              	100.00%		Q91035              	100.00%
                    	       		Q98938              	37.15%
Bootstrap support for F6XBS5 as seed ortholog is 75%.
Bootstrap support for Q91035 as seed ortholog is 100%.

Group of orthologs #2796. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 G.gallus:189

H2XUL2              	100.00%		F1P241              	100.00%
                    	       		Q04929              	11.15%
Bootstrap support for H2XUL2 as seed ortholog is 99%.
Bootstrap support for F1P241 as seed ortholog is 100%.

Group of orthologs #2797. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 G.gallus:283

F6Y8Y8              	100.00%		E1C0I4              	100.00%
Bootstrap support for F6Y8Y8 as seed ortholog is 100%.
Bootstrap support for E1C0I4 as seed ortholog is 100%.

Group of orthologs #2798. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 G.gallus:39

F6TFY3              	100.00%		P24367              	100.00%
Bootstrap support for F6TFY3 as seed ortholog is 99%.
Bootstrap support for P24367 as seed ortholog is 97%.

Group of orthologs #2799. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 G.gallus:144

F7A934              	100.00%		Q5ZKE5              	100.00%
Bootstrap support for F7A934 as seed ortholog is 100%.
Bootstrap support for Q5ZKE5 as seed ortholog is 99%.

Group of orthologs #2800. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 G.gallus:282

F6S8Y1              	100.00%		E1BRZ5              	100.00%
                    	       		E1BRZ4              	38.80%
                    	       		E1BRZ3              	32.40%
Bootstrap support for F6S8Y1 as seed ortholog is 100%.
Bootstrap support for E1BRZ5 as seed ortholog is 100%.

Group of orthologs #2801. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 G.gallus:282

F6V2L0              	100.00%		H9L3J8              	100.00%
                    	       		E1C5S0              	33.43%
                    	       		F1P0Q9              	28.85%
Bootstrap support for F6V2L0 as seed ortholog is 100%.
Bootstrap support for H9L3J8 as seed ortholog is 100%.

Group of orthologs #2802. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 G.gallus:282

F6SPV5              	100.00%		E1BYS1              	100.00%
                    	       		E1BRG4              	19.55%
Bootstrap support for F6SPV5 as seed ortholog is 100%.
Bootstrap support for E1BYS1 as seed ortholog is 100%.

Group of orthologs #2803. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 G.gallus:282

F6RGX1              	100.00%		E1BZ66              	100.00%
Bootstrap support for F6RGX1 as seed ortholog is 100%.
Bootstrap support for E1BZ66 as seed ortholog is 100%.

Group of orthologs #2804. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 G.gallus:21

F6R0U8              	100.00%		F1NBL3              	100.00%
Bootstrap support for F6R0U8 as seed ortholog is 100%.
Bootstrap support for F1NBL3 as seed ortholog is 81%.

Group of orthologs #2805. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 G.gallus:142

F6XXY5              	100.00%		E1C055              	100.00%
Bootstrap support for F6XXY5 as seed ortholog is 100%.
Bootstrap support for E1C055 as seed ortholog is 100%.

Group of orthologs #2806. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 G.gallus:154

F6YYU4              	100.00%		E1BYM8              	100.00%
Bootstrap support for F6YYU4 as seed ortholog is 100%.
Bootstrap support for E1BYM8 as seed ortholog is 100%.

Group of orthologs #2807. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 G.gallus:282

F7B0X0              	100.00%		E1C455              	100.00%
Bootstrap support for F7B0X0 as seed ortholog is 100%.
Bootstrap support for E1C455 as seed ortholog is 100%.

Group of orthologs #2808. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 G.gallus:282

F6ZSN0              	100.00%		F1N872              	100.00%
Bootstrap support for F6ZSN0 as seed ortholog is 100%.
Bootstrap support for F1N872 as seed ortholog is 100%.

Group of orthologs #2809. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 G.gallus:166

H2XPF4              	100.00%		E1C3D3              	100.00%
Bootstrap support for H2XPF4 as seed ortholog is 100%.
Bootstrap support for E1C3D3 as seed ortholog is 100%.

Group of orthologs #2810. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 G.gallus:282

F6VUL9              	100.00%		P79781              	100.00%
Bootstrap support for F6VUL9 as seed ortholog is 100%.
Bootstrap support for P79781 as seed ortholog is 100%.

Group of orthologs #2811. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 G.gallus:282

H2Y2A0              	100.00%		F1NXY8              	100.00%
Bootstrap support for H2Y2A0 as seed ortholog is 100%.
Bootstrap support for F1NXY8 as seed ortholog is 100%.

Group of orthologs #2812. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 G.gallus:94

H2XXH6              	100.00%		Q6JHX4              	100.00%
Bootstrap support for H2XXH6 as seed ortholog is 100%.
Bootstrap support for Q6JHX4 as seed ortholog is 100%.

Group of orthologs #2813. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 G.gallus:177

F6TSI9              	100.00%		F1N916              	100.00%
                    	       		F1NY96              	20.50%
Bootstrap support for F6TSI9 as seed ortholog is 100%.
Bootstrap support for F1N916 as seed ortholog is 99%.

Group of orthologs #2814. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 G.gallus:281

F6WNQ6              	100.00%		F1NUF4              	100.00%
                    	       		F1NEU9              	36.49%
Bootstrap support for F6WNQ6 as seed ortholog is 100%.
Bootstrap support for F1NUF4 as seed ortholog is 100%.

Group of orthologs #2815. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 G.gallus:239

F6RYL0              	100.00%		E1BWZ3              	100.00%
Bootstrap support for F6RYL0 as seed ortholog is 100%.
Bootstrap support for E1BWZ3 as seed ortholog is 100%.

Group of orthologs #2816. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 G.gallus:143

F6UQX1              	100.00%		F1NS64              	100.00%
Bootstrap support for F6UQX1 as seed ortholog is 100%.
Bootstrap support for F1NS64 as seed ortholog is 99%.

Group of orthologs #2817. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 G.gallus:281

H2Y0A5              	100.00%		P51417              	100.00%
Bootstrap support for H2Y0A5 as seed ortholog is 100%.
Bootstrap support for P51417 as seed ortholog is 100%.

Group of orthologs #2818. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 G.gallus:280

F6QAL4              	100.00%		E1BR24              	100.00%
F6QAM3              	84.97%		
F6X1X1              	27.45%		
Bootstrap support for F6QAL4 as seed ortholog is 91%.
Bootstrap support for E1BR24 as seed ortholog is 100%.

Group of orthologs #2819. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:204

F6X184              	100.00%		P30371              	100.00%
                    	       		P16047              	31.46%
                    	       		P09531              	5.80%
Bootstrap support for F6X184 as seed ortholog is 100%.
Bootstrap support for P30371 as seed ortholog is 99%.

Group of orthologs #2820. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:280

F6R3K6              	100.00%		F1N8G9              	100.00%
                    	       		E1BSG5              	28.39%
Bootstrap support for F6R3K6 as seed ortholog is 100%.
Bootstrap support for F1N8G9 as seed ortholog is 100%.

Group of orthologs #2821. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:280

F7A9X0              	100.00%		F1NHE7              	100.00%
                    	       		F1NZ50              	41.93%
Bootstrap support for F7A9X0 as seed ortholog is 100%.
Bootstrap support for F1NHE7 as seed ortholog is 100%.

Group of orthologs #2822. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:280

F6XQS7              	100.00%		F1NZ38              	100.00%
                    	       		E1BUK1              	36.70%
Bootstrap support for F6XQS7 as seed ortholog is 100%.
Bootstrap support for F1NZ38 as seed ortholog is 100%.

Group of orthologs #2823. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 G.gallus:89

H2XZJ2              	100.00%		P24032              	100.00%
                    	       		P02612              	80.56%
Bootstrap support for H2XZJ2 as seed ortholog is 100%.
Bootstrap support for P24032 as seed ortholog is 100%.

Group of orthologs #2824. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:280

Q8HIN3              	100.00%		P18945              	100.00%
                    	       		Q85GK9              	100.00%
Bootstrap support for Q8HIN3 as seed ortholog is 100%.
Bootstrap support for P18945 as seed ortholog is 100%.
Bootstrap support for Q85GK9 as seed ortholog is 100%.

Group of orthologs #2825. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:146

F6QW33              	100.00%		E1BZ04              	100.00%
Bootstrap support for F6QW33 as seed ortholog is 100%.
Bootstrap support for E1BZ04 as seed ortholog is 100%.

Group of orthologs #2826. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:280

F6UMT8              	100.00%		E1BYF1              	100.00%
Bootstrap support for F6UMT8 as seed ortholog is 100%.
Bootstrap support for E1BYF1 as seed ortholog is 100%.

Group of orthologs #2827. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:280

F6YAL4              	100.00%		E1BVA4              	100.00%
Bootstrap support for F6YAL4 as seed ortholog is 100%.
Bootstrap support for E1BVA4 as seed ortholog is 100%.

Group of orthologs #2828. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:89

F6S5L9              	100.00%		F1NW90              	100.00%
Bootstrap support for F6S5L9 as seed ortholog is 100%.
Bootstrap support for F1NW90 as seed ortholog is 89%.

Group of orthologs #2829. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:280

F6V8G3              	100.00%		F1P5H2              	100.00%
Bootstrap support for F6V8G3 as seed ortholog is 100%.
Bootstrap support for F1P5H2 as seed ortholog is 100%.

Group of orthologs #2830. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:280

F7AR48              	100.00%		F1NLC1              	100.00%
Bootstrap support for F7AR48 as seed ortholog is 100%.
Bootstrap support for F1NLC1 as seed ortholog is 100%.

Group of orthologs #2831. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:280

H2XVI6              	100.00%		E1C3U9              	100.00%
Bootstrap support for H2XVI6 as seed ortholog is 100%.
Bootstrap support for E1C3U9 as seed ortholog is 100%.

Group of orthologs #2832. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:280

F7BDK3              	100.00%		F1NJZ3              	100.00%
Bootstrap support for F7BDK3 as seed ortholog is 100%.
Bootstrap support for F1NJZ3 as seed ortholog is 100%.

Group of orthologs #2833. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:280

F6X5U2              	100.00%		F1P5B4              	100.00%
Bootstrap support for F6X5U2 as seed ortholog is 100%.
Bootstrap support for F1P5B4 as seed ortholog is 100%.

Group of orthologs #2834. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 G.gallus:280

F6ZCF4              	100.00%		F1NZ71              	100.00%
Bootstrap support for F6ZCF4 as seed ortholog is 100%.
Bootstrap support for F1NZ71 as seed ortholog is 100%.

Group of orthologs #2835. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 G.gallus:137

F6SW20              	100.00%		Q98943              	100.00%
Bootstrap support for F6SW20 as seed ortholog is 96%.
Bootstrap support for Q98943 as seed ortholog is 99%.

Group of orthologs #2836. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:280

H2XQ29              	100.00%		F1NM89              	100.00%
Bootstrap support for H2XQ29 as seed ortholog is 100%.
Bootstrap support for F1NM89 as seed ortholog is 100%.

Group of orthologs #2837. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 G.gallus:280

H2XPJ6              	100.00%		Q5ZLN2              	100.00%
Bootstrap support for H2XPJ6 as seed ortholog is 100%.
Bootstrap support for Q5ZLN2 as seed ortholog is 100%.

Group of orthologs #2838. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 G.gallus:97

Q95P33              	100.00%		P51475              	100.00%
F6YTW2              	22.88%		P22328              	8.66%
                    	       		P28683              	7.29%
                    	       		F1NNI9              	6.15%
Bootstrap support for Q95P33 as seed ortholog is 100%.
Bootstrap support for P51475 as seed ortholog is 99%.

Group of orthologs #2839. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 G.gallus:106

F6VRB9              	100.00%		Q9W6I3              	100.00%
                    	       		F1NJ82              	38.15%
                    	       		E1BRR8              	21.57%
Bootstrap support for F6VRB9 as seed ortholog is 100%.
Bootstrap support for Q9W6I3 as seed ortholog is 99%.

Group of orthologs #2840. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:279

F6QLG8              	100.00%		E1BXB8              	100.00%
                    	       		E1C8B4              	68.48%
Bootstrap support for F6QLG8 as seed ortholog is 100%.
Bootstrap support for E1BXB8 as seed ortholog is 100%.

Group of orthologs #2841. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:279

F7A726              	100.00%		E1BSZ0              	100.00%
H2XV91              	7.43%		
Bootstrap support for F7A726 as seed ortholog is 100%.
Bootstrap support for E1BSZ0 as seed ortholog is 100%.

Group of orthologs #2842. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:97

F6ZUZ5              	100.00%		F1NH61              	100.00%
                    	       		C5HV42              	48.94%
Bootstrap support for F6ZUZ5 as seed ortholog is 100%.
Bootstrap support for F1NH61 as seed ortholog is 98%.

Group of orthologs #2843. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:279

Q68A32              	100.00%		F1NCN4              	100.00%
                    	       		F1NFJ1              	20.38%
Bootstrap support for Q68A32 as seed ortholog is 100%.
Bootstrap support for F1NCN4 as seed ortholog is 100%.

Group of orthologs #2844. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:279

H2XU57              	100.00%		Q6ITC7              	100.00%
Q8I7D6              	90.91%		
Bootstrap support for H2XU57 as seed ortholog is 100%.
Bootstrap support for Q6ITC7 as seed ortholog is 100%.

Group of orthologs #2845. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:279

F6PMD1              	100.00%		E1BSI4              	100.00%
Bootstrap support for F6PMD1 as seed ortholog is 100%.
Bootstrap support for E1BSI4 as seed ortholog is 100%.

Group of orthologs #2846. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 G.gallus:279

F6ZW37              	100.00%		E1C648              	100.00%
Bootstrap support for F6ZW37 as seed ortholog is 100%.
Bootstrap support for E1C648 as seed ortholog is 100%.

Group of orthologs #2847. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:221

Q8T888              	100.00%		E1BV60              	100.00%
Bootstrap support for Q8T888 as seed ortholog is 100%.
Bootstrap support for E1BV60 as seed ortholog is 100%.

Group of orthologs #2848. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:279

F6UIW1              	100.00%		Q5ZLP2              	100.00%
Bootstrap support for F6UIW1 as seed ortholog is 100%.
Bootstrap support for Q5ZLP2 as seed ortholog is 100%.

Group of orthologs #2849. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:279

H2XTJ5              	100.00%		F1NM78              	100.00%
Bootstrap support for H2XTJ5 as seed ortholog is 100%.
Bootstrap support for F1NM78 as seed ortholog is 100%.

Group of orthologs #2850. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:279

F6YDS2              	100.00%		Q5F3W5              	100.00%
Bootstrap support for F6YDS2 as seed ortholog is 99%.
Bootstrap support for Q5F3W5 as seed ortholog is 100%.

Group of orthologs #2851. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:279

F6YDH8              	100.00%		Q5F473              	100.00%
Bootstrap support for F6YDH8 as seed ortholog is 100%.
Bootstrap support for Q5F473 as seed ortholog is 100%.

Group of orthologs #2852. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:153

F7BKG7              	100.00%		Q5ZL01              	100.00%
Bootstrap support for F7BKG7 as seed ortholog is 100%.
Bootstrap support for Q5ZL01 as seed ortholog is 99%.

Group of orthologs #2853. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 G.gallus:215

H2XZK6              	100.00%		F1NWZ6              	100.00%
Bootstrap support for H2XZK6 as seed ortholog is 100%.
Bootstrap support for F1NWZ6 as seed ortholog is 100%.

Group of orthologs #2854. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 G.gallus:75

H2XR17              	100.00%		F1NBX2              	100.00%
                    	       		F1NZY3              	38.17%
                    	       		F1NMK8              	36.53%
                    	       		E1BSZ9              	9.13%
Bootstrap support for H2XR17 as seed ortholog is 96%.
Bootstrap support for F1NBX2 as seed ortholog is 98%.

Group of orthologs #2855. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 G.gallus:278

H2Y2K9              	100.00%		F1NGL8              	100.00%
                    	       		F1NR43              	11.41%
                    	       		Q5F3L9              	9.86%
Bootstrap support for H2Y2K9 as seed ortholog is 100%.
Bootstrap support for F1NGL8 as seed ortholog is 100%.

Group of orthologs #2856. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 G.gallus:156

H2XNS7              	100.00%		F1NZC9              	100.00%
                    	       		F1NRQ1              	7.92%
Bootstrap support for H2XNS7 as seed ortholog is 100%.
Bootstrap support for F1NZC9 as seed ortholog is 99%.

Group of orthologs #2857. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 G.gallus:278

H2XMH0              	100.00%		E1BS42              	100.00%
Bootstrap support for H2XMH0 as seed ortholog is 100%.
Bootstrap support for E1BS42 as seed ortholog is 100%.

Group of orthologs #2858. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 G.gallus:278

H2XYV9              	100.00%		F1NCP7              	100.00%
Bootstrap support for H2XYV9 as seed ortholog is 100%.
Bootstrap support for F1NCP7 as seed ortholog is 100%.

Group of orthologs #2859. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 G.gallus:62

H2XLI1              	100.00%		F1NWW1              	100.00%
                    	       		F1P2B1              	40.37%
                    	       		E1BTE5              	11.83%
Bootstrap support for H2XLI1 as seed ortholog is 100%.
Bootstrap support for F1NWW1 as seed ortholog is 94%.

Group of orthologs #2860. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 G.gallus:277

F6UG73              	100.00%		F1NCG5              	100.00%
                    	       		F1N8S5              	22.21%
Bootstrap support for F6UG73 as seed ortholog is 100%.
Bootstrap support for F1NCG5 as seed ortholog is 100%.

Group of orthologs #2861. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 G.gallus:277

F7B6W8              	100.00%		Q90Y35              	100.00%
                    	       		H9L3C0              	16.49%
Bootstrap support for F7B6W8 as seed ortholog is 100%.
Bootstrap support for Q90Y35 as seed ortholog is 100%.

Group of orthologs #2862. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 G.gallus:277

H2XYP3              	100.00%		Q5ZL77              	100.00%
                    	       		F1NZP3              	33.46%
Bootstrap support for H2XYP3 as seed ortholog is 100%.
Bootstrap support for Q5ZL77 as seed ortholog is 100%.

Group of orthologs #2863. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 G.gallus:205

F6TLL4              	100.00%		F1NAH1              	100.00%
Bootstrap support for F6TLL4 as seed ortholog is 100%.
Bootstrap support for F1NAH1 as seed ortholog is 100%.

Group of orthologs #2864. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 G.gallus:277

F6XVH4              	100.00%		F1N8Y2              	100.00%
Bootstrap support for F6XVH4 as seed ortholog is 100%.
Bootstrap support for F1N8Y2 as seed ortholog is 100%.

Group of orthologs #2865. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 G.gallus:168

F7AGZ7              	100.00%		E1C213              	100.00%
Bootstrap support for F7AGZ7 as seed ortholog is 99%.
Bootstrap support for E1C213 as seed ortholog is 99%.

Group of orthologs #2866. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 G.gallus:277

F6ZBF1              	100.00%		E1C9F4              	100.00%
Bootstrap support for F6ZBF1 as seed ortholog is 100%.
Bootstrap support for E1C9F4 as seed ortholog is 100%.

Group of orthologs #2867. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 G.gallus:210

Q256Z9              	100.00%		E1BYQ2              	100.00%
Bootstrap support for Q256Z9 as seed ortholog is 100%.
Bootstrap support for E1BYQ2 as seed ortholog is 100%.

Group of orthologs #2868. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 G.gallus:277

F6UUL4              	100.00%		Q5ZHM5              	100.00%
Bootstrap support for F6UUL4 as seed ortholog is 100%.
Bootstrap support for Q5ZHM5 as seed ortholog is 100%.

Group of orthologs #2869. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 G.gallus:277

H2XT29              	100.00%		H9KZL2              	100.00%
Bootstrap support for H2XT29 as seed ortholog is 100%.
Bootstrap support for H9KZL2 as seed ortholog is 100%.

Group of orthologs #2870. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 G.gallus:276

F6W304              	100.00%		E1BSN3              	100.00%
Bootstrap support for F6W304 as seed ortholog is 99%.
Bootstrap support for E1BSN3 as seed ortholog is 100%.

Group of orthologs #2871. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 G.gallus:276

F6YUM3              	100.00%		E1C2V6              	100.00%
Bootstrap support for F6YUM3 as seed ortholog is 100%.
Bootstrap support for E1C2V6 as seed ortholog is 100%.

Group of orthologs #2872. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 G.gallus:276

F7ALS7              	100.00%		E1BYB8              	100.00%
Bootstrap support for F7ALS7 as seed ortholog is 100%.
Bootstrap support for E1BYB8 as seed ortholog is 100%.

Group of orthologs #2873. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 G.gallus:213

F6WUF6              	100.00%		F1NC18              	100.00%
Bootstrap support for F6WUF6 as seed ortholog is 100%.
Bootstrap support for F1NC18 as seed ortholog is 100%.

Group of orthologs #2874. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 G.gallus:276

F6Z3Y4              	100.00%		F1N9I1              	100.00%
Bootstrap support for F6Z3Y4 as seed ortholog is 100%.
Bootstrap support for F1N9I1 as seed ortholog is 100%.

Group of orthologs #2875. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 G.gallus:276

H2XPN7              	100.00%		F1NDV4              	100.00%
Bootstrap support for H2XPN7 as seed ortholog is 100%.
Bootstrap support for F1NDV4 as seed ortholog is 100%.

Group of orthologs #2876. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 G.gallus:276

F7AG49              	100.00%		Q5ZHN4              	100.00%
Bootstrap support for F7AG49 as seed ortholog is 100%.
Bootstrap support for Q5ZHN4 as seed ortholog is 100%.

Group of orthologs #2877. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 G.gallus:276

F6ZLT0              	100.00%		Q8AYS7              	100.00%
Bootstrap support for F6ZLT0 as seed ortholog is 100%.
Bootstrap support for Q8AYS7 as seed ortholog is 100%.

Group of orthologs #2878. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 G.gallus:276

H2Y3P5              	100.00%		F1NK22              	100.00%
Bootstrap support for H2Y3P5 as seed ortholog is 98%.
Bootstrap support for F1NK22 as seed ortholog is 100%.

Group of orthologs #2879. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 G.gallus:112

F7ATJ8              	100.00%		F1NPN1              	100.00%
                    	       		Q9PW71              	36.72%
                    	       		F1NYC7              	9.29%
Bootstrap support for F7ATJ8 as seed ortholog is 100%.
Bootstrap support for F1NPN1 as seed ortholog is 99%.

Group of orthologs #2880. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 G.gallus:275

H2XQS5              	100.00%		Q5ZJF4              	100.00%
F7ADF2              	35.36%		
Bootstrap support for H2XQS5 as seed ortholog is 100%.
Bootstrap support for Q5ZJF4 as seed ortholog is 100%.

Group of orthologs #2881. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:275

H2XRU5              	100.00%		Q9W6F3              	100.00%
                    	       		E1BSI3              	46.34%
Bootstrap support for H2XRU5 as seed ortholog is 100%.
Bootstrap support for Q9W6F3 as seed ortholog is 100%.

Group of orthologs #2882. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 G.gallus:275

Q4H2Z5              	100.00%		P55166              	100.00%
                    	       		P47236              	9.31%
Bootstrap support for Q4H2Z5 as seed ortholog is 100%.
Bootstrap support for P55166 as seed ortholog is 100%.

Group of orthologs #2883. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 G.gallus:275

F6SKS5              	100.00%		E1BY86              	100.00%
Bootstrap support for F6SKS5 as seed ortholog is 100%.
Bootstrap support for E1BY86 as seed ortholog is 100%.

Group of orthologs #2884. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 G.gallus:275

F6VKC0              	100.00%		E1C8A8              	100.00%
Bootstrap support for F6VKC0 as seed ortholog is 100%.
Bootstrap support for E1C8A8 as seed ortholog is 100%.

Group of orthologs #2885. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 G.gallus:275

F6SY22              	100.00%		F1NPI3              	100.00%
Bootstrap support for F6SY22 as seed ortholog is 100%.
Bootstrap support for F1NPI3 as seed ortholog is 100%.

Group of orthologs #2886. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 G.gallus:275

F6WSD2              	100.00%		F1NI13              	100.00%
Bootstrap support for F6WSD2 as seed ortholog is 100%.
Bootstrap support for F1NI13 as seed ortholog is 100%.

Group of orthologs #2887. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 G.gallus:275

F6UA65              	100.00%		Q5ZLR5              	100.00%
Bootstrap support for F6UA65 as seed ortholog is 100%.
Bootstrap support for Q5ZLR5 as seed ortholog is 100%.

Group of orthologs #2888. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 G.gallus:275

H2XSK2              	100.00%		F1NLE7              	100.00%
Bootstrap support for H2XSK2 as seed ortholog is 100%.
Bootstrap support for F1NLE7 as seed ortholog is 100%.

Group of orthologs #2889. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 G.gallus:274

F6UDM9              	100.00%		F1NJ68              	25.68%
H2XR44              	100.00%		F1P3J5              	100.00%
                    	       		E1BWZ0              	25.14%
                    	       		E1BWZ1              	24.59%
                    	       		F1NJS5              	23.51%
                    	       		F1NJS4              	21.70%
Bootstrap support for F6UDM9 as seed ortholog is 100%.
Bootstrap support for H2XR44 as seed ortholog is 100%.
Bootstrap support for F1P3J5 as seed ortholog is 100%.

Group of orthologs #2890. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:274

F6SVU6              	100.00%		F1NBT7              	100.00%
L7N0U5              	54.41%		
H2XS65              	6.73%		
F6VTQ0              	5.98%		
F6ULA0              	5.98%		
Bootstrap support for F6SVU6 as seed ortholog is 76%.
Bootstrap support for F1NBT7 as seed ortholog is 100%.

Group of orthologs #2891. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 G.gallus:131

H2XMX1              	100.00%		F1NIA1              	100.00%
                    	       		F1NYP2              	12.50%
Bootstrap support for H2XMX1 as seed ortholog is 100%.
Bootstrap support for F1NIA1 as seed ortholog is 99%.

Group of orthologs #2892. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 G.gallus:164

F6XMP2              	100.00%		E1BYI0              	100.00%
Bootstrap support for F6XMP2 as seed ortholog is 100%.
Bootstrap support for E1BYI0 as seed ortholog is 100%.

Group of orthologs #2893. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 G.gallus:220

F6SLU0              	100.00%		F1NRR6              	100.00%
Bootstrap support for F6SLU0 as seed ortholog is 95%.
Bootstrap support for F1NRR6 as seed ortholog is 100%.

Group of orthologs #2894. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 G.gallus:274

Q1RL40              	100.00%		E1BVP0              	100.00%
Bootstrap support for Q1RL40 as seed ortholog is 100%.
Bootstrap support for E1BVP0 as seed ortholog is 100%.

Group of orthologs #2895. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 G.gallus:195

F6VLD0              	100.00%		Q5ZL74              	100.00%
Bootstrap support for F6VLD0 as seed ortholog is 100%.
Bootstrap support for Q5ZL74 as seed ortholog is 100%.

Group of orthologs #2896. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 G.gallus:274

H2XY27              	100.00%		Q5ZLL5              	100.00%
Bootstrap support for H2XY27 as seed ortholog is 100%.
Bootstrap support for Q5ZLL5 as seed ortholog is 100%.

Group of orthologs #2897. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 G.gallus:273

F6TI75              	100.00%		F1NVA3              	100.00%
                    	       		E1C972              	24.39%
Bootstrap support for F6TI75 as seed ortholog is 100%.
Bootstrap support for F1NVA3 as seed ortholog is 100%.

Group of orthologs #2898. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 G.gallus:273

H2XQH7              	100.00%		F1NPM7              	100.00%
                    	       		Q9DDU8              	27.09%
Bootstrap support for H2XQH7 as seed ortholog is 100%.
Bootstrap support for F1NPM7 as seed ortholog is 100%.

Group of orthologs #2899. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 G.gallus:273

Q4H3P5              	100.00%		F1NAK8              	100.00%
                    	       		F1NL47              	18.45%
Bootstrap support for Q4H3P5 as seed ortholog is 100%.
Bootstrap support for F1NAK8 as seed ortholog is 100%.

Group of orthologs #2900. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 G.gallus:193

F6SN27              	100.00%		E1BWX0              	100.00%
Bootstrap support for F6SN27 as seed ortholog is 100%.
Bootstrap support for E1BWX0 as seed ortholog is 100%.

Group of orthologs #2901. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 G.gallus:273

F7B4V3              	100.00%		F1NI97              	100.00%
Bootstrap support for F7B4V3 as seed ortholog is 100%.
Bootstrap support for F1NI97 as seed ortholog is 100%.

Group of orthologs #2902. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 G.gallus:196

F6VEB2              	100.00%		H9L0T1              	100.00%
Bootstrap support for F6VEB2 as seed ortholog is 100%.
Bootstrap support for H9L0T1 as seed ortholog is 100%.

Group of orthologs #2903. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 G.gallus:273

F6Z6J2              	100.00%		F1NZ91              	100.00%
Bootstrap support for F6Z6J2 as seed ortholog is 100%.
Bootstrap support for F1NZ91 as seed ortholog is 100%.

Group of orthologs #2904. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 G.gallus:106

H2Y009              	100.00%		Q5F3Q7              	100.00%
Bootstrap support for H2Y009 as seed ortholog is 100%.
Bootstrap support for Q5F3Q7 as seed ortholog is 98%.

Group of orthologs #2905. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 G.gallus:91

F7BLL2              	100.00%		F1N9W0              	100.00%
                    	       		E1BWY5              	27.85%
                    	       		E1C4B7              	19.35%
Bootstrap support for F7BLL2 as seed ortholog is 99%.
Bootstrap support for F1N9W0 as seed ortholog is 99%.

Group of orthologs #2906. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 G.gallus:206

F6XSD8              	100.00%		E1BV18              	100.00%
H2XPB7              	42.86%		
Bootstrap support for F6XSD8 as seed ortholog is 100%.
Bootstrap support for E1BV18 as seed ortholog is 100%.

Group of orthologs #2907. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 G.gallus:272

F6RDT5              	100.00%		F1NCS3              	100.00%
H2XVT8              	37.79%		
Bootstrap support for F6RDT5 as seed ortholog is 100%.
Bootstrap support for F1NCS3 as seed ortholog is 100%.

Group of orthologs #2908. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 G.gallus:143

F6XTV8              	100.00%		F1NP36              	100.00%
                    	       		F1NBF9              	28.36%
Bootstrap support for F6XTV8 as seed ortholog is 100%.
Bootstrap support for F1NP36 as seed ortholog is 99%.

Group of orthologs #2909. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 G.gallus:272

F6SFI7              	100.00%		E1BS34              	100.00%
Bootstrap support for F6SFI7 as seed ortholog is 100%.
Bootstrap support for E1BS34 as seed ortholog is 100%.

Group of orthologs #2910. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 G.gallus:272

F6U497              	100.00%		E1C1G5              	100.00%
Bootstrap support for F6U497 as seed ortholog is 100%.
Bootstrap support for E1C1G5 as seed ortholog is 100%.

Group of orthologs #2911. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 G.gallus:272

F7BK27              	100.00%		F1NIW6              	100.00%
Bootstrap support for F7BK27 as seed ortholog is 100%.
Bootstrap support for F1NIW6 as seed ortholog is 100%.

Group of orthologs #2912. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 G.gallus:187

F6U8M8              	100.00%		Q5ZHN1              	100.00%
Bootstrap support for F6U8M8 as seed ortholog is 100%.
Bootstrap support for Q5ZHN1 as seed ortholog is 100%.

Group of orthologs #2913. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:12 G.gallus:48

F7ASL8              	100.00%		P62167              	100.00%
Bootstrap support for F7ASL8 as seed ortholog is 71%.
Alternative seed ortholog is F6QRC2 (12 bits away from this cluster)
Bootstrap support for P62167 as seed ortholog is 98%.

Group of orthologs #2914. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 G.gallus:63

F6TMZ9              	100.00%		F1NK95              	100.00%
                    	       		E1BYX3              	14.71%
                    	       		E1BWF1              	7.00%
                    	       		F1NWA5              	5.88%
Bootstrap support for F6TMZ9 as seed ortholog is 83%.
Bootstrap support for F1NK95 as seed ortholog is 93%.

Group of orthologs #2915. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 G.gallus:271

F6WKL0              	100.00%		E1BY76              	100.00%
                    	       		Q0PVE4              	35.96%
                    	       		F1P0U8              	20.81%
Bootstrap support for F6WKL0 as seed ortholog is 100%.
Bootstrap support for E1BY76 as seed ortholog is 100%.

Group of orthologs #2916. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 G.gallus:271

H2XWW0              	100.00%		F1N841              	100.00%
                    	       		F1NSM3              	14.22%
Bootstrap support for H2XWW0 as seed ortholog is 100%.
Bootstrap support for F1N841 as seed ortholog is 100%.

Group of orthologs #2917. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 G.gallus:222

F6T9R1              	100.00%		Q5ZHW8              	100.00%
Bootstrap support for F6T9R1 as seed ortholog is 100%.
Bootstrap support for Q5ZHW8 as seed ortholog is 100%.

Group of orthologs #2918. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 G.gallus:271

F6UFA9              	100.00%		Q5ZIJ8              	100.00%
Bootstrap support for F6UFA9 as seed ortholog is 100%.
Bootstrap support for Q5ZIJ8 as seed ortholog is 100%.

Group of orthologs #2919. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 G.gallus:271

F7AJZ2              	100.00%		Q5ZIP3              	100.00%
Bootstrap support for F7AJZ2 as seed ortholog is 100%.
Bootstrap support for Q5ZIP3 as seed ortholog is 100%.

Group of orthologs #2920. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 G.gallus:219

F6W7C2              	100.00%		F1NWR4              	100.00%
                    	       		E1C0J9              	25.55%
Bootstrap support for F6W7C2 as seed ortholog is 100%.
Bootstrap support for F1NWR4 as seed ortholog is 100%.

Group of orthologs #2921. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 G.gallus:270

F6Z0B9              	100.00%		F1NS20              	100.00%
F6QFQ6              	40.31%		
Bootstrap support for F6Z0B9 as seed ortholog is 100%.
Bootstrap support for F1NS20 as seed ortholog is 100%.

Group of orthologs #2922. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 G.gallus:22

P91580              	100.00%		Q5ZHV1              	100.00%
H2XZR6              	93.68%		
Bootstrap support for P91580 as seed ortholog is 100%.
Bootstrap support for Q5ZHV1 as seed ortholog is 81%.

Group of orthologs #2923. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 G.gallus:164

H2XM23              	100.00%		E1BQB9              	100.00%
Bootstrap support for H2XM23 as seed ortholog is 100%.
Bootstrap support for E1BQB9 as seed ortholog is 99%.

Group of orthologs #2924. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 G.gallus:270

F6TZ23              	100.00%		F1P0W9              	100.00%
Bootstrap support for F6TZ23 as seed ortholog is 100%.
Bootstrap support for F1P0W9 as seed ortholog is 100%.

Group of orthologs #2925. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 G.gallus:270

F6RZS3              	100.00%		H9L0N1              	100.00%
Bootstrap support for F6RZS3 as seed ortholog is 100%.
Bootstrap support for H9L0N1 as seed ortholog is 100%.

Group of orthologs #2926. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 G.gallus:8

F6WV27              	100.00%		F1P210              	100.00%
Bootstrap support for F6WV27 as seed ortholog is 99%.
Bootstrap support for F1P210 as seed ortholog is 56%.
Alternative seed ortholog is F1NLN9 (8 bits away from this cluster)

Group of orthologs #2927. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 G.gallus:270

F6UE24              	100.00%		P50594              	100.00%
Bootstrap support for F6UE24 as seed ortholog is 100%.
Bootstrap support for P50594 as seed ortholog is 100%.

Group of orthologs #2928. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 G.gallus:142

Q1RPY5              	100.00%		E1C626              	100.00%
Bootstrap support for Q1RPY5 as seed ortholog is 99%.
Bootstrap support for E1C626 as seed ortholog is 99%.

Group of orthologs #2929. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 G.gallus:58

F7B496              	100.00%		F1P5G4              	100.00%
Bootstrap support for F7B496 as seed ortholog is 100%.
Bootstrap support for F1P5G4 as seed ortholog is 97%.

Group of orthologs #2930. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 G.gallus:94

H2XNC3              	100.00%		F1P110              	100.00%
Bootstrap support for H2XNC3 as seed ortholog is 51%.
Alternative seed ortholog is F6RKK1 (3 bits away from this cluster)
Bootstrap support for F1P110 as seed ortholog is 99%.

Group of orthologs #2931. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:166

F6Z7L3              	100.00%		Q8JJC0              	100.00%
Bootstrap support for F6Z7L3 as seed ortholog is 99%.
Bootstrap support for Q8JJC0 as seed ortholog is 99%.

Group of orthologs #2932. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:191

H2Y0T2              	100.00%		F1NPD8              	100.00%
Bootstrap support for H2Y0T2 as seed ortholog is 99%.
Bootstrap support for F1NPD8 as seed ortholog is 100%.

Group of orthologs #2933. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 G.gallus:270

F7ASB0              	100.00%		Q5ZIJ0              	100.00%
Bootstrap support for F7ASB0 as seed ortholog is 100%.
Bootstrap support for Q5ZIJ0 as seed ortholog is 100%.

Group of orthologs #2934. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 G.gallus:270

H2XSU1              	100.00%		Q6JLB2              	100.00%
Bootstrap support for H2XSU1 as seed ortholog is 100%.
Bootstrap support for Q6JLB2 as seed ortholog is 100%.

Group of orthologs #2935. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 G.gallus:269

F6R180              	100.00%		E1C1I5              	100.00%
                    	       		F1P0P5              	31.65%
Bootstrap support for F6R180 as seed ortholog is 100%.
Bootstrap support for E1C1I5 as seed ortholog is 100%.

Group of orthologs #2936. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 G.gallus:269

F6ZCI6              	100.00%		E1C0P7              	100.00%
                    	       		E1C592              	8.64%
Bootstrap support for F6ZCI6 as seed ortholog is 100%.
Bootstrap support for E1C0P7 as seed ortholog is 100%.

Group of orthologs #2937. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 G.gallus:269

H2XUW3              	100.00%		F1N9S3              	100.00%
                    	       		E1C7K1              	14.96%
Bootstrap support for H2XUW3 as seed ortholog is 100%.
Bootstrap support for F1N9S3 as seed ortholog is 100%.

Group of orthologs #2938. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 G.gallus:269

F6SCG1              	100.00%		E1C609              	100.00%
Bootstrap support for F6SCG1 as seed ortholog is 100%.
Bootstrap support for E1C609 as seed ortholog is 100%.

Group of orthologs #2939. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 G.gallus:269

F6SWM7              	100.00%		F1P1D8              	100.00%
Bootstrap support for F6SWM7 as seed ortholog is 100%.
Bootstrap support for F1P1D8 as seed ortholog is 100%.

Group of orthologs #2940. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 G.gallus:145

H2XMA1              	100.00%		E1C5B2              	100.00%
Bootstrap support for H2XMA1 as seed ortholog is 100%.
Bootstrap support for E1C5B2 as seed ortholog is 100%.

Group of orthologs #2941. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 G.gallus:143

F6X0B6              	100.00%		F1NVJ2              	100.00%
Bootstrap support for F6X0B6 as seed ortholog is 100%.
Bootstrap support for F1NVJ2 as seed ortholog is 99%.

Group of orthologs #2942. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 G.gallus:269

F6VAC9              	100.00%		F1P4C6              	100.00%
Bootstrap support for F6VAC9 as seed ortholog is 91%.
Bootstrap support for F1P4C6 as seed ortholog is 100%.

Group of orthologs #2943. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 G.gallus:269

F6TX13              	100.00%		Q5ZKL1              	100.00%
Bootstrap support for F6TX13 as seed ortholog is 100%.
Bootstrap support for Q5ZKL1 as seed ortholog is 100%.

Group of orthologs #2944. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 G.gallus:143

F6Y321              	100.00%		F1N861              	100.00%
                    	       		F1NW46              	31.83%
                    	       		H9KZA6              	30.45%
Bootstrap support for F6Y321 as seed ortholog is 100%.
Bootstrap support for F1N861 as seed ortholog is 100%.

Group of orthologs #2945. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 G.gallus:268

F6ZZC3              	100.00%		F1NAA2              	100.00%
                    	       		Q5ZJT1              	99.54%
Bootstrap support for F6ZZC3 as seed ortholog is 100%.
Bootstrap support for F1NAA2 as seed ortholog is 100%.

Group of orthologs #2946. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:207

F6Y1W8              	100.00%		E1C2X0              	100.00%
Bootstrap support for F6Y1W8 as seed ortholog is 100%.
Bootstrap support for E1C2X0 as seed ortholog is 100%.

Group of orthologs #2947. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 G.gallus:268

F6ZJ82              	100.00%		F1NIF9              	100.00%
Bootstrap support for F6ZJ82 as seed ortholog is 100%.
Bootstrap support for F1NIF9 as seed ortholog is 100%.

Group of orthologs #2948. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 G.gallus:127

F6YII5              	100.00%		F1NWK9              	100.00%
Bootstrap support for F6YII5 as seed ortholog is 99%.
Bootstrap support for F1NWK9 as seed ortholog is 99%.

Group of orthologs #2949. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 G.gallus:268

F6TRZ2              	100.00%		P41125              	100.00%
Bootstrap support for F6TRZ2 as seed ortholog is 100%.
Bootstrap support for P41125 as seed ortholog is 100%.

Group of orthologs #2950. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 G.gallus:268

H2XWC1              	100.00%		F1NA76              	100.00%
Bootstrap support for H2XWC1 as seed ortholog is 100%.
Bootstrap support for F1NA76 as seed ortholog is 100%.

Group of orthologs #2951. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 G.gallus:67

F7AEP2              	100.00%		Q5ZI57              	100.00%
Bootstrap support for F7AEP2 as seed ortholog is 100%.
Bootstrap support for Q5ZI57 as seed ortholog is 99%.

Group of orthologs #2952. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 G.gallus:268

H2XQK5              	100.00%		Q5ZKD0              	100.00%
Bootstrap support for H2XQK5 as seed ortholog is 100%.
Bootstrap support for Q5ZKD0 as seed ortholog is 100%.

Group of orthologs #2953. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 G.gallus:267

F6ZH30              	100.00%		F1NA16              	100.00%
                    	       		F1NWC6              	6.07%
Bootstrap support for F6ZH30 as seed ortholog is 100%.
Bootstrap support for F1NA16 as seed ortholog is 100%.

Group of orthologs #2954. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 G.gallus:267

F7BP82              	100.00%		F1NT31              	100.00%
F7A686              	17.14%		
Bootstrap support for F7BP82 as seed ortholog is 99%.
Bootstrap support for F1NT31 as seed ortholog is 100%.

Group of orthologs #2955. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 G.gallus:267

F6Q7D4              	100.00%		E1C0I8              	100.00%
Bootstrap support for F6Q7D4 as seed ortholog is 100%.
Bootstrap support for E1C0I8 as seed ortholog is 100%.

Group of orthologs #2956. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 G.gallus:201

F6X6H9              	100.00%		F1NGV6              	100.00%
Bootstrap support for F6X6H9 as seed ortholog is 100%.
Bootstrap support for F1NGV6 as seed ortholog is 100%.

Group of orthologs #2957. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 G.gallus:267

F6ZIM0              	100.00%		F1N9A7              	100.00%
Bootstrap support for F6ZIM0 as seed ortholog is 100%.
Bootstrap support for F1N9A7 as seed ortholog is 100%.

Group of orthologs #2958. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 G.gallus:267

F7A7P7              	100.00%		F1NU83              	100.00%
Bootstrap support for F7A7P7 as seed ortholog is 100%.
Bootstrap support for F1NU83 as seed ortholog is 100%.

Group of orthologs #2959. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 G.gallus:159

F6XP52              	100.00%		Q11200              	100.00%
Bootstrap support for F6XP52 as seed ortholog is 100%.
Bootstrap support for Q11200 as seed ortholog is 100%.

Group of orthologs #2960. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 G.gallus:151

F7B355              	100.00%		H9KZI7              	100.00%
Bootstrap support for F7B355 as seed ortholog is 100%.
Bootstrap support for H9KZI7 as seed ortholog is 100%.

Group of orthologs #2961. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 G.gallus:267

F7B4P8              	100.00%		P50141              	100.00%
Bootstrap support for F7B4P8 as seed ortholog is 100%.
Bootstrap support for P50141 as seed ortholog is 100%.

Group of orthologs #2962. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 G.gallus:214

F6SVN8              	100.00%		E1BXJ0              	100.00%
                    	       		Q5F3N1              	47.72%
Bootstrap support for F6SVN8 as seed ortholog is 100%.
Bootstrap support for E1BXJ0 as seed ortholog is 100%.

Group of orthologs #2963. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 G.gallus:196

F6TR45              	100.00%		Q5F474              	100.00%
                    	       		E1C2T2              	15.11%
Bootstrap support for F6TR45 as seed ortholog is 100%.
Bootstrap support for Q5F474 as seed ortholog is 100%.

Group of orthologs #2964. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 G.gallus:266

F6PHJ3              	100.00%		E1C840              	100.00%
Bootstrap support for F6PHJ3 as seed ortholog is 100%.
Bootstrap support for E1C840 as seed ortholog is 100%.

Group of orthologs #2965. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 G.gallus:266

F6SFU4              	100.00%		E1C3L8              	100.00%
Bootstrap support for F6SFU4 as seed ortholog is 100%.
Bootstrap support for E1C3L8 as seed ortholog is 100%.

Group of orthologs #2966. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:73

F6TEQ0              	100.00%		E1C524              	100.00%
Bootstrap support for F6TEQ0 as seed ortholog is 100%.
Bootstrap support for E1C524 as seed ortholog is 99%.

Group of orthologs #2967. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 G.gallus:266

F7BPM3              	100.00%		F1NUY5              	100.00%
Bootstrap support for F7BPM3 as seed ortholog is 100%.
Bootstrap support for F1NUY5 as seed ortholog is 100%.

Group of orthologs #2968. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 G.gallus:266

F6W2K0              	100.00%		Q5ZHV8              	100.00%
Bootstrap support for F6W2K0 as seed ortholog is 100%.
Bootstrap support for Q5ZHV8 as seed ortholog is 100%.

Group of orthologs #2969. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 G.gallus:266

H2XXL5              	100.00%		F1NGR6              	100.00%
Bootstrap support for H2XXL5 as seed ortholog is 100%.
Bootstrap support for F1NGR6 as seed ortholog is 100%.

Group of orthologs #2970. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 G.gallus:189

F7AFF3              	100.00%		E1C6B9              	100.00%
                    	       		E1C864              	20.87%
Bootstrap support for F7AFF3 as seed ortholog is 100%.
Bootstrap support for E1C6B9 as seed ortholog is 100%.

Group of orthologs #2971. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 G.gallus:218

H2XU01              	100.00%		Q07883              	100.00%
                    	       		E1BXR0              	7.85%
Bootstrap support for H2XU01 as seed ortholog is 99%.
Bootstrap support for Q07883 as seed ortholog is 100%.

Group of orthologs #2972. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 G.gallus:265

F6QD73              	100.00%		Q5ZK17              	100.00%
Bootstrap support for F6QD73 as seed ortholog is 100%.
Bootstrap support for Q5ZK17 as seed ortholog is 100%.

Group of orthologs #2973. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 G.gallus:265

F6Z8I7              	100.00%		F1P4Q4              	100.00%
Bootstrap support for F6Z8I7 as seed ortholog is 100%.
Bootstrap support for F1P4Q4 as seed ortholog is 100%.

Group of orthologs #2974. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 G.gallus:265

H2XTG0              	100.00%		F1NKN7              	100.00%
Bootstrap support for H2XTG0 as seed ortholog is 100%.
Bootstrap support for F1NKN7 as seed ortholog is 100%.

Group of orthologs #2975. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 G.gallus:265

F6XNX8              	100.00%		Q800L1              	100.00%
Bootstrap support for F6XNX8 as seed ortholog is 100%.
Bootstrap support for Q800L1 as seed ortholog is 100%.

Group of orthologs #2976. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 G.gallus:6

H2XK16              	100.00%		P84247              	100.00%
Bootstrap support for H2XK16 as seed ortholog is 61%.
Alternative seed ortholog is F7AHT0 (2 bits away from this cluster)
Bootstrap support for P84247 as seed ortholog is 79%.

Group of orthologs #2977. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 G.gallus:264

F6Z8E9              	100.00%		Q76LW2              	100.00%
                    	       		Q76KB2              	46.30%
Bootstrap support for F6Z8E9 as seed ortholog is 100%.
Bootstrap support for Q76LW2 as seed ortholog is 100%.

Group of orthologs #2978. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 G.gallus:214

F6UMK9              	100.00%		E1C2K4              	100.00%
Bootstrap support for F6UMK9 as seed ortholog is 100%.
Bootstrap support for E1C2K4 as seed ortholog is 100%.

Group of orthologs #2979. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:165

F6X9K2              	100.00%		E1C722              	100.00%
Bootstrap support for F6X9K2 as seed ortholog is 100%.
Bootstrap support for E1C722 as seed ortholog is 100%.

Group of orthologs #2980. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 G.gallus:264

H2XSL2              	100.00%		E1BWT2              	100.00%
Bootstrap support for H2XSL2 as seed ortholog is 100%.
Bootstrap support for E1BWT2 as seed ortholog is 100%.

Group of orthologs #2981. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 G.gallus:264

H2Y1H7              	100.00%		E1BUW5              	100.00%
Bootstrap support for H2Y1H7 as seed ortholog is 100%.
Bootstrap support for E1BUW5 as seed ortholog is 100%.

Group of orthologs #2982. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 G.gallus:138

F6U5L2              	100.00%		Q90972              	100.00%
Bootstrap support for F6U5L2 as seed ortholog is 100%.
Bootstrap support for Q90972 as seed ortholog is 99%.

Group of orthologs #2983. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 G.gallus:264

H2XWQ2              	100.00%		Q5F3A6              	100.00%
Bootstrap support for H2XWQ2 as seed ortholog is 100%.
Bootstrap support for Q5F3A6 as seed ortholog is 100%.

Group of orthologs #2984. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 G.gallus:147

F6U1H7              	100.00%		P14731              	100.00%
                    	       		P14732              	46.61%
                    	       		P13648              	38.90%
                    	       		F1N8X2              	30.49%
Bootstrap support for F6U1H7 as seed ortholog is 99%.
Bootstrap support for P14731 as seed ortholog is 99%.

Group of orthologs #2985. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 G.gallus:263

F6RRS1              	100.00%		E1BY73              	100.00%
                    	       		F1NTL4              	28.55%
Bootstrap support for F6RRS1 as seed ortholog is 100%.
Bootstrap support for E1BY73 as seed ortholog is 100%.

Group of orthologs #2986. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 G.gallus:31

F6RQT3              	100.00%		F1NVZ2              	100.00%
                    	       		F1NH25              	36.69%
Bootstrap support for F6RQT3 as seed ortholog is 100%.
Bootstrap support for F1NVZ2 as seed ortholog is 98%.

Group of orthologs #2987. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 G.gallus:263

F6X134              	100.00%		Q5ZIQ3              	100.00%
                    	       		H9L242              	99.68%
Bootstrap support for F6X134 as seed ortholog is 100%.
Bootstrap support for Q5ZIQ3 as seed ortholog is 100%.

Group of orthologs #2988. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 G.gallus:263

F6SCE7              	100.00%		E1C062              	100.00%
Bootstrap support for F6SCE7 as seed ortholog is 100%.
Bootstrap support for E1C062 as seed ortholog is 100%.

Group of orthologs #2989. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 G.gallus:263

F6Z8U5              	100.00%		E1C0L2              	100.00%
Bootstrap support for F6Z8U5 as seed ortholog is 100%.
Bootstrap support for E1C0L2 as seed ortholog is 100%.

Group of orthologs #2990. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 G.gallus:263

F7B5B9              	100.00%		E1C588              	100.00%
Bootstrap support for F7B5B9 as seed ortholog is 100%.
Bootstrap support for E1C588 as seed ortholog is 100%.

Group of orthologs #2991. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 G.gallus:263

F7AWV5              	100.00%		F1NCX2              	100.00%
Bootstrap support for F7AWV5 as seed ortholog is 100%.
Bootstrap support for F1NCX2 as seed ortholog is 100%.

Group of orthologs #2992. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 G.gallus:263

F7AND3              	100.00%		F1NFB2              	100.00%
Bootstrap support for F7AND3 as seed ortholog is 100%.
Bootstrap support for F1NFB2 as seed ortholog is 100%.

Group of orthologs #2993. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 G.gallus:263

F6YKG0              	100.00%		F1P5I2              	100.00%
Bootstrap support for F6YKG0 as seed ortholog is 100%.
Bootstrap support for F1P5I2 as seed ortholog is 100%.

Group of orthologs #2994. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 G.gallus:263

F6WSV9              	100.00%		Q5ZKP6              	100.00%
Bootstrap support for F6WSV9 as seed ortholog is 100%.
Bootstrap support for Q5ZKP6 as seed ortholog is 100%.

Group of orthologs #2995. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 G.gallus:263

H2XYE0              	100.00%		F1NZC0              	100.00%
Bootstrap support for H2XYE0 as seed ortholog is 100%.
Bootstrap support for F1NZC0 as seed ortholog is 100%.

Group of orthologs #2996. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 G.gallus:263

H2XV90              	100.00%		Q5F3N9              	100.00%
Bootstrap support for H2XV90 as seed ortholog is 100%.
Bootstrap support for Q5F3N9 as seed ortholog is 100%.

Group of orthologs #2997. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 G.gallus:262

F6QGN1              	100.00%		F1N9M6              	100.00%
                    	       		F1NBG3              	23.82%
                    	       		E1C5K0              	14.38%
Bootstrap support for F6QGN1 as seed ortholog is 100%.
Bootstrap support for F1N9M6 as seed ortholog is 100%.

Group of orthologs #2998. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:262

Q4H3H4              	100.00%		O12971              	100.00%
                    	       		O12972              	26.03%
                    	       		E1C8Y5              	21.90%
Bootstrap support for Q4H3H4 as seed ortholog is 95%.
Bootstrap support for O12971 as seed ortholog is 100%.

Group of orthologs #2999. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 G.gallus:202

F7B1Y1              	100.00%		F1NDC2              	100.00%
Q8I7D5              	77.42%		
Bootstrap support for F7B1Y1 as seed ortholog is 100%.
Bootstrap support for F1NDC2 as seed ortholog is 100%.

Group of orthologs #3000. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 G.gallus:262

F6U095              	100.00%		E1BW23              	100.00%
Bootstrap support for F6U095 as seed ortholog is 100%.
Bootstrap support for E1BW23 as seed ortholog is 100%.

Group of orthologs #3001. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:195

F6XJX5              	100.00%		E1BYG3              	100.00%
Bootstrap support for F6XJX5 as seed ortholog is 100%.
Bootstrap support for E1BYG3 as seed ortholog is 100%.

Group of orthologs #3002. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 G.gallus:141

F6YIF4              	100.00%		E1C1A7              	100.00%
Bootstrap support for F6YIF4 as seed ortholog is 99%.
Bootstrap support for E1C1A7 as seed ortholog is 99%.

Group of orthologs #3003. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 G.gallus:262

F7APT3              	100.00%		F1N8W9              	100.00%
Bootstrap support for F7APT3 as seed ortholog is 100%.
Bootstrap support for F1N8W9 as seed ortholog is 100%.

Group of orthologs #3004. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 G.gallus:262

F6YFI7              	100.00%		F1NKI3              	100.00%
Bootstrap support for F6YFI7 as seed ortholog is 100%.
Bootstrap support for F1NKI3 as seed ortholog is 100%.

Group of orthologs #3005. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 G.gallus:262

F7B480              	100.00%		F1NF40              	100.00%
Bootstrap support for F7B480 as seed ortholog is 100%.
Bootstrap support for F1NF40 as seed ortholog is 100%.

Group of orthologs #3006. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 G.gallus:262

F6YXK3              	100.00%		F1NSJ2              	100.00%
Bootstrap support for F6YXK3 as seed ortholog is 100%.
Bootstrap support for F1NSJ2 as seed ortholog is 100%.

Group of orthologs #3007. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 G.gallus:185

F6RXD4              	100.00%		Q5ZIW6              	100.00%
Bootstrap support for F6RXD4 as seed ortholog is 100%.
Bootstrap support for Q5ZIW6 as seed ortholog is 100%.

Group of orthologs #3008. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 G.gallus:262

H2XX98              	100.00%		F1NJ21              	100.00%
Bootstrap support for H2XX98 as seed ortholog is 100%.
Bootstrap support for F1NJ21 as seed ortholog is 100%.

Group of orthologs #3009. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 G.gallus:163

F6ZJP7              	100.00%		Q5ZLV2              	100.00%
Bootstrap support for F6ZJP7 as seed ortholog is 100%.
Bootstrap support for Q5ZLV2 as seed ortholog is 100%.

Group of orthologs #3010. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 G.gallus:262

H2XYM5              	100.00%		F1NY72              	100.00%
Bootstrap support for H2XYM5 as seed ortholog is 100%.
Bootstrap support for F1NY72 as seed ortholog is 100%.

Group of orthologs #3011. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 G.gallus:262

H2Y0C0              	100.00%		F1NXW2              	100.00%
Bootstrap support for H2Y0C0 as seed ortholog is 100%.
Bootstrap support for F1NXW2 as seed ortholog is 100%.

Group of orthologs #3012. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 G.gallus:162

F6PHF4              	100.00%		E1C738              	100.00%
                    	       		H9L0D5              	17.21%
                    	       		E1C422              	15.50%
Bootstrap support for F6PHF4 as seed ortholog is 100%.
Bootstrap support for E1C738 as seed ortholog is 99%.

Group of orthologs #3013. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 G.gallus:164

F6WZU2              	100.00%		Q5ZJM7              	100.00%
                    	       		F1NUX1              	30.39%
Bootstrap support for F6WZU2 as seed ortholog is 100%.
Bootstrap support for Q5ZJM7 as seed ortholog is 100%.

Group of orthologs #3014. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 G.gallus:261

H2Y1F2              	100.00%		Q8JG54              	100.00%
                    	       		F1NNI0              	19.34%
Bootstrap support for H2Y1F2 as seed ortholog is 100%.
Bootstrap support for Q8JG54 as seed ortholog is 100%.

Group of orthologs #3015. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 G.gallus:261

F6QJH8              	100.00%		E1BSU0              	100.00%
Bootstrap support for F6QJH8 as seed ortholog is 100%.
Bootstrap support for E1BSU0 as seed ortholog is 100%.

Group of orthologs #3016. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 G.gallus:261

F6VLF4              	100.00%		E1BYZ0              	100.00%
Bootstrap support for F6VLF4 as seed ortholog is 100%.
Bootstrap support for E1BYZ0 as seed ortholog is 100%.

Group of orthologs #3017. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 G.gallus:261

F6PP67              	100.00%		F1NZ67              	100.00%
Bootstrap support for F6PP67 as seed ortholog is 100%.
Bootstrap support for F1NZ67 as seed ortholog is 100%.

Group of orthologs #3018. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 G.gallus:261

F6WQS5              	100.00%		F1P4S3              	100.00%
Bootstrap support for F6WQS5 as seed ortholog is 100%.
Bootstrap support for F1P4S3 as seed ortholog is 100%.

Group of orthologs #3019. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:202

F7BEX9              	100.00%		Q7T2H2              	100.00%
Bootstrap support for F7BEX9 as seed ortholog is 99%.
Bootstrap support for Q7T2H2 as seed ortholog is 100%.

Group of orthologs #3020. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 G.gallus:67

F6R8W1              	100.00%		F1NDD8              	100.00%
                    	       		F1NBV5              	11.21%
Bootstrap support for F6R8W1 as seed ortholog is 99%.
Bootstrap support for F1NDD8 as seed ortholog is 87%.

Group of orthologs #3021. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 G.gallus:260

F7BIC8              	100.00%		H9KZP8              	100.00%
                    	       		E1BTK0              	10.03%
Bootstrap support for F7BIC8 as seed ortholog is 100%.
Bootstrap support for H9KZP8 as seed ortholog is 100%.

Group of orthologs #3022. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:260

Q4H356              	100.00%		F1NBK9              	100.00%
                    	       		F1P1U7              	24.63%
Bootstrap support for Q4H356 as seed ortholog is 94%.
Bootstrap support for F1NBK9 as seed ortholog is 100%.

Group of orthologs #3023. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 G.gallus:260

Q4VYB1              	100.00%		F1NH16              	100.00%
                    	       		F1NQ32              	19.51%
Bootstrap support for Q4VYB1 as seed ortholog is 93%.
Bootstrap support for F1NH16 as seed ortholog is 100%.

Group of orthologs #3024. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 G.gallus:260

F6X9U7              	100.00%		E1C7T7              	100.00%
Bootstrap support for F6X9U7 as seed ortholog is 100%.
Bootstrap support for E1C7T7 as seed ortholog is 100%.

Group of orthologs #3025. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 G.gallus:260

F7BHD6              	100.00%		E1BW44              	100.00%
Bootstrap support for F7BHD6 as seed ortholog is 100%.
Bootstrap support for E1BW44 as seed ortholog is 100%.

Group of orthologs #3026. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 G.gallus:260

F6Y089              	100.00%		F1NLH9              	100.00%
Bootstrap support for F6Y089 as seed ortholog is 100%.
Bootstrap support for F1NLH9 as seed ortholog is 100%.

Group of orthologs #3027. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:151

F6WJS0              	100.00%		F1NZH6              	100.00%
Bootstrap support for F6WJS0 as seed ortholog is 100%.
Bootstrap support for F1NZH6 as seed ortholog is 100%.

Group of orthologs #3028. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 G.gallus:260

F7B0F3              	100.00%		F1NS27              	100.00%
Bootstrap support for F7B0F3 as seed ortholog is 100%.
Bootstrap support for F1NS27 as seed ortholog is 100%.

Group of orthologs #3029. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 G.gallus:80

F6UAF0              	100.00%		Q5ZMJ0              	100.00%
Bootstrap support for F6UAF0 as seed ortholog is 64%.
Alternative seed ortholog is H2XNB4 (8 bits away from this cluster)
Bootstrap support for Q5ZMJ0 as seed ortholog is 99%.

Group of orthologs #3030. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 G.gallus:260

F7ACY4              	100.00%		F1P4D4              	100.00%
Bootstrap support for F7ACY4 as seed ortholog is 100%.
Bootstrap support for F1P4D4 as seed ortholog is 100%.

Group of orthologs #3031. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 G.gallus:260

F6XVG4              	100.00%		Q5ZKT8              	100.00%
Bootstrap support for F6XVG4 as seed ortholog is 100%.
Bootstrap support for Q5ZKT8 as seed ortholog is 100%.

Group of orthologs #3032. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 G.gallus:260

H2XWR9              	100.00%		F1P277              	100.00%
Bootstrap support for H2XWR9 as seed ortholog is 100%.
Bootstrap support for F1P277 as seed ortholog is 100%.

Group of orthologs #3033. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 G.gallus:260

H2XYS7              	100.00%		Q3MUH5              	100.00%
Bootstrap support for H2XYS7 as seed ortholog is 100%.
Bootstrap support for Q3MUH5 as seed ortholog is 100%.

Group of orthologs #3034. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 G.gallus:259

H2XJH4              	100.00%		F1N852              	100.00%
                    	       		F1P0V0              	100.00%
Bootstrap support for H2XJH4 as seed ortholog is 100%.
Bootstrap support for F1N852 as seed ortholog is 100%.
Bootstrap support for F1P0V0 as seed ortholog is 100%.

Group of orthologs #3035. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 G.gallus:173

F7ANK8              	100.00%		F1NJZ8              	100.00%
                    	       		E1BVH8              	57.50%
Bootstrap support for F7ANK8 as seed ortholog is 100%.
Bootstrap support for F1NJZ8 as seed ortholog is 100%.

Group of orthologs #3036. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 G.gallus:259

F6QU62              	100.00%		Q5ZKZ4              	100.00%
                    	       		H9L1X6              	28.44%
Bootstrap support for F6QU62 as seed ortholog is 100%.
Bootstrap support for Q5ZKZ4 as seed ortholog is 100%.

Group of orthologs #3037. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 G.gallus:88

H2XSB5              	100.00%		F1N831              	100.00%
                    	       		F1NXW6              	15.10%
Bootstrap support for H2XSB5 as seed ortholog is 100%.
Bootstrap support for F1N831 as seed ortholog is 99%.

Group of orthologs #3038. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 G.gallus:259

F7AR28              	100.00%		Q98948              	100.00%
                    	       		F1NTD5              	59.93%
Bootstrap support for F7AR28 as seed ortholog is 100%.
Bootstrap support for Q98948 as seed ortholog is 100%.

Group of orthologs #3039. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 G.gallus:259

F6ZQ39              	100.00%		E1C8V6              	100.00%
Bootstrap support for F6ZQ39 as seed ortholog is 100%.
Bootstrap support for E1C8V6 as seed ortholog is 100%.

Group of orthologs #3040. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 G.gallus:259

F6XV81              	100.00%		Q5ZHT8              	100.00%
Bootstrap support for F6XV81 as seed ortholog is 100%.
Bootstrap support for Q5ZHT8 as seed ortholog is 100%.

Group of orthologs #3041. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 G.gallus:47

Q4H3T3              	100.00%		Q5ZI03              	100.00%
Bootstrap support for Q4H3T3 as seed ortholog is 100%.
Bootstrap support for Q5ZI03 as seed ortholog is 84%.

Group of orthologs #3042. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 G.gallus:258

Q1RLF9              	100.00%		F1NQP0              	100.00%
                    	       		E1C8P0              	33.86%
                    	       		E1BR79              	31.13%
Bootstrap support for Q1RLF9 as seed ortholog is 100%.
Bootstrap support for F1NQP0 as seed ortholog is 100%.

Group of orthologs #3043. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 G.gallus:258

F6UA38              	100.00%		E1BWP4              	100.00%
                    	       		F1NU76              	16.51%
Bootstrap support for F6UA38 as seed ortholog is 100%.
Bootstrap support for E1BWP4 as seed ortholog is 100%.

Group of orthologs #3044. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 G.gallus:258

H2Y0K3              	100.00%		E1BUR3              	100.00%
Bootstrap support for H2Y0K3 as seed ortholog is 100%.
Bootstrap support for E1BUR3 as seed ortholog is 100%.

Group of orthologs #3045. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 G.gallus:176

F6X2B6              	100.00%		F1NZQ1              	100.00%
                    	       		E1BUG4              	35.66%
                    	       		F1ND45              	25.70%
Bootstrap support for F6X2B6 as seed ortholog is 100%.
Bootstrap support for F1NZQ1 as seed ortholog is 100%.

Group of orthologs #3046. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 G.gallus:257

F7A2C9              	100.00%		Q5ZJD8              	100.00%
                    	       		E1C5P7              	18.65%
Bootstrap support for F7A2C9 as seed ortholog is 100%.
Bootstrap support for Q5ZJD8 as seed ortholog is 100%.

Group of orthologs #3047. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 G.gallus:257

F6RC10              	100.00%		F1NW64              	100.00%
Bootstrap support for F6RC10 as seed ortholog is 100%.
Bootstrap support for F1NW64 as seed ortholog is 100%.

Group of orthologs #3048. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 G.gallus:257

F6Z227              	100.00%		F1NKZ7              	100.00%
Bootstrap support for F6Z227 as seed ortholog is 100%.
Bootstrap support for F1NKZ7 as seed ortholog is 100%.

Group of orthologs #3049. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 G.gallus:257

F7A4X2              	100.00%		F1NT24              	100.00%
Bootstrap support for F7A4X2 as seed ortholog is 100%.
Bootstrap support for F1NT24 as seed ortholog is 100%.

Group of orthologs #3050. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 G.gallus:257

F6WJQ0              	100.00%		Q08200              	100.00%
Bootstrap support for F6WJQ0 as seed ortholog is 100%.
Bootstrap support for Q08200 as seed ortholog is 100%.

Group of orthologs #3051. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 G.gallus:60

F6XLN4              	100.00%		Q5ZI79              	100.00%
Bootstrap support for F6XLN4 as seed ortholog is 100%.
Bootstrap support for Q5ZI79 as seed ortholog is 87%.

Group of orthologs #3052. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 G.gallus:257

F6X2R6              	100.00%		Q5ZL35              	100.00%
Bootstrap support for F6X2R6 as seed ortholog is 100%.
Bootstrap support for Q5ZL35 as seed ortholog is 100%.

Group of orthologs #3053. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 G.gallus:257

F7AUY7              	100.00%		Q5ZJQ7              	100.00%
Bootstrap support for F7AUY7 as seed ortholog is 100%.
Bootstrap support for Q5ZJQ7 as seed ortholog is 100%.

Group of orthologs #3054. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 G.gallus:181

Q1RLG5              	100.00%		F1NKJ0              	100.00%
Bootstrap support for Q1RLG5 as seed ortholog is 100%.
Bootstrap support for F1NKJ0 as seed ortholog is 100%.

Group of orthologs #3055. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 G.gallus:257

H2XLN9              	100.00%		Q5ZLL9              	100.00%
Bootstrap support for H2XLN9 as seed ortholog is 100%.
Bootstrap support for Q5ZLL9 as seed ortholog is 100%.

Group of orthologs #3056. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 G.gallus:198

F6WDK3              	100.00%		Q5ZKT9              	100.00%
                    	       		F1N931              	19.82%
                    	       		F1NVK5              	8.84%
Bootstrap support for F6WDK3 as seed ortholog is 100%.
Bootstrap support for Q5ZKT9 as seed ortholog is 99%.

Group of orthologs #3057. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 G.gallus:195

F6U8Q9              	100.00%		Q5ZKL6              	100.00%
                    	       		F1P323              	35.54%
Bootstrap support for F6U8Q9 as seed ortholog is 100%.
Bootstrap support for Q5ZKL6 as seed ortholog is 99%.

Group of orthologs #3058. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 G.gallus:256

F6Q021              	100.00%		E1C818              	100.00%
Bootstrap support for F6Q021 as seed ortholog is 100%.
Bootstrap support for E1C818 as seed ortholog is 100%.

Group of orthologs #3059. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 G.gallus:58

H2XME3              	100.00%		F1P151              	100.00%
Bootstrap support for H2XME3 as seed ortholog is 100%.
Bootstrap support for F1P151 as seed ortholog is 98%.

Group of orthologs #3060. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 G.gallus:255

F6YIK6              	100.00%		F1NI14              	100.00%
                    	       		F1NLI4              	27.70%
                    	       		Q9I969              	25.14%
Bootstrap support for F6YIK6 as seed ortholog is 100%.
Bootstrap support for F1NI14 as seed ortholog is 100%.

Group of orthologs #3061. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 G.gallus:255

H2XS31              	100.00%		Q5ZJ87              	100.00%
H2XZZ2              	96.80%		F1NUL4              	81.85%
Bootstrap support for H2XS31 as seed ortholog is 100%.
Bootstrap support for Q5ZJ87 as seed ortholog is 100%.

Group of orthologs #3062. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 G.gallus:255

H2XMJ7              	100.00%		F1N8B6              	100.00%
                    	       		F1P1P7              	17.09%
Bootstrap support for H2XMJ7 as seed ortholog is 100%.
Bootstrap support for F1N8B6 as seed ortholog is 100%.

Group of orthologs #3063. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 G.gallus:255

F7B4T0              	100.00%		Q5ZKH4              	100.00%
                    	       		Q5ZMC9              	26.70%
Bootstrap support for F7B4T0 as seed ortholog is 100%.
Bootstrap support for Q5ZKH4 as seed ortholog is 100%.

Group of orthologs #3064. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 G.gallus:255

F6U315              	100.00%		F1N8I0              	100.00%
Bootstrap support for F6U315 as seed ortholog is 100%.
Bootstrap support for F1N8I0 as seed ortholog is 100%.

Group of orthologs #3065. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 G.gallus:145

F6XDJ2              	100.00%		E1C309              	100.00%
Bootstrap support for F6XDJ2 as seed ortholog is 100%.
Bootstrap support for E1C309 as seed ortholog is 99%.

Group of orthologs #3066. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 G.gallus:255

F6Q3E6              	100.00%		F1P344              	100.00%
Bootstrap support for F6Q3E6 as seed ortholog is 100%.
Bootstrap support for F1P344 as seed ortholog is 100%.

Group of orthologs #3067. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 G.gallus:255

H2XP93              	100.00%		E1BV94              	100.00%
Bootstrap support for H2XP93 as seed ortholog is 100%.
Bootstrap support for E1BV94 as seed ortholog is 100%.

Group of orthologs #3068. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 G.gallus:255

F7BPY2              	100.00%		E1C1A8              	100.00%
Bootstrap support for F7BPY2 as seed ortholog is 100%.
Bootstrap support for E1C1A8 as seed ortholog is 100%.

Group of orthologs #3069. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 G.gallus:101

F7BH23              	100.00%		F1NHD8              	100.00%
Bootstrap support for F7BH23 as seed ortholog is 100%.
Bootstrap support for F1NHD8 as seed ortholog is 99%.

Group of orthologs #3070. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 G.gallus:255

F6ZC01              	100.00%		Q5ZJM4              	100.00%
Bootstrap support for F6ZC01 as seed ortholog is 100%.
Bootstrap support for Q5ZJM4 as seed ortholog is 100%.

Group of orthologs #3071. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 G.gallus:255

Q0E670              	100.00%		F1NLQ2              	100.00%
Bootstrap support for Q0E670 as seed ortholog is 100%.
Bootstrap support for F1NLQ2 as seed ortholog is 100%.

Group of orthologs #3072. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 G.gallus:255

H2Y2W3              	100.00%		F1NVX0              	100.00%
Bootstrap support for H2Y2W3 as seed ortholog is 100%.
Bootstrap support for F1NVX0 as seed ortholog is 100%.

Group of orthologs #3073. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 G.gallus:254

F6RZD9              	100.00%		E1BQN1              	100.00%
F6SY55              	19.11%		
Bootstrap support for F6RZD9 as seed ortholog is 100%.
Bootstrap support for E1BQN1 as seed ortholog is 100%.

Group of orthologs #3074. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 G.gallus:254

F6PXM4              	100.00%		F1NB35              	100.00%
                    	       		F1NM88              	13.81%
Bootstrap support for F6PXM4 as seed ortholog is 100%.
Bootstrap support for F1NB35 as seed ortholog is 100%.

Group of orthologs #3075. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 G.gallus:254

F6T3G6              	100.00%		E1C5W9              	100.00%
F6WG12              	21.20%		
Bootstrap support for F6T3G6 as seed ortholog is 100%.
Bootstrap support for E1C5W9 as seed ortholog is 100%.

Group of orthologs #3076. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 G.gallus:123

F6ZDT1              	100.00%		H9KZR7              	100.00%
                    	       		F1NQP7              	80.36%
Bootstrap support for F6ZDT1 as seed ortholog is 100%.
Bootstrap support for H9KZR7 as seed ortholog is 99%.

Group of orthologs #3077. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:254

F6V3T4              	100.00%		E1BQM1              	100.00%
Bootstrap support for F6V3T4 as seed ortholog is 100%.
Bootstrap support for E1BQM1 as seed ortholog is 100%.

Group of orthologs #3078. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 G.gallus:254

F6XR12              	100.00%		F1NVG6              	100.00%
Bootstrap support for F6XR12 as seed ortholog is 100%.
Bootstrap support for F1NVG6 as seed ortholog is 100%.

Group of orthologs #3079. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 G.gallus:253

F6Z6W8              	100.00%		E1BY49              	100.00%
F7A7R4              	14.06%		E1BYF3              	54.34%
Bootstrap support for F6Z6W8 as seed ortholog is 100%.
Bootstrap support for E1BY49 as seed ortholog is 100%.

Group of orthologs #3080. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:152

F6ZD62              	100.00%		O42410              	100.00%
                    	       		Q90W82              	31.13%
                    	       		H9L053              	24.63%
Bootstrap support for F6ZD62 as seed ortholog is 99%.
Bootstrap support for O42410 as seed ortholog is 99%.

Group of orthologs #3081. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 G.gallus:50

F6TWK8              	100.00%		E1C1U8              	100.00%
                    	       		E1C8X1              	48.79%
Bootstrap support for F6TWK8 as seed ortholog is 91%.
Bootstrap support for E1C1U8 as seed ortholog is 86%.

Group of orthologs #3082. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 G.gallus:186

F6ZBW6              	100.00%		E1BTR1              	100.00%
                    	       		E1BTN3              	8.90%
Bootstrap support for F6ZBW6 as seed ortholog is 100%.
Bootstrap support for E1BTR1 as seed ortholog is 100%.

Group of orthologs #3083. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 G.gallus:253

F6RQZ5              	100.00%		F1NMM0              	100.00%
                    	       		E1C354              	7.53%
Bootstrap support for F6RQZ5 as seed ortholog is 100%.
Bootstrap support for F1NMM0 as seed ortholog is 100%.

Group of orthologs #3084. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 G.gallus:253

H2XR37              	100.00%		E1C3C2              	100.00%
                    	       		F1P1C6              	11.40%
Bootstrap support for H2XR37 as seed ortholog is 100%.
Bootstrap support for E1C3C2 as seed ortholog is 100%.

Group of orthologs #3085. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 G.gallus:145

C4B8X2              	100.00%		E1C8A0              	100.00%
Bootstrap support for C4B8X2 as seed ortholog is 100%.
Bootstrap support for E1C8A0 as seed ortholog is 100%.

Group of orthologs #3086. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 G.gallus:253

F6Y1Z7              	100.00%		E1BRU0              	100.00%
Bootstrap support for F6Y1Z7 as seed ortholog is 100%.
Bootstrap support for E1BRU0 as seed ortholog is 100%.

Group of orthologs #3087. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 G.gallus:253

F7B404              	100.00%		E1C859              	100.00%
Bootstrap support for F7B404 as seed ortholog is 100%.
Bootstrap support for E1C859 as seed ortholog is 100%.

Group of orthologs #3088. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 G.gallus:253

F6TBV6              	100.00%		F1P129              	100.00%
Bootstrap support for F6TBV6 as seed ortholog is 100%.
Bootstrap support for F1P129 as seed ortholog is 100%.

Group of orthologs #3089. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 G.gallus:253

F7B7M7              	100.00%		F1N9V1              	100.00%
Bootstrap support for F7B7M7 as seed ortholog is 100%.
Bootstrap support for F1N9V1 as seed ortholog is 100%.

Group of orthologs #3090. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 G.gallus:253

F7B6C9              	100.00%		F1ND15              	100.00%
Bootstrap support for F7B6C9 as seed ortholog is 100%.
Bootstrap support for F1ND15 as seed ortholog is 100%.

Group of orthologs #3091. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 G.gallus:253

F6ZUM5              	100.00%		F1NUR7              	100.00%
Bootstrap support for F6ZUM5 as seed ortholog is 100%.
Bootstrap support for F1NUR7 as seed ortholog is 100%.

Group of orthologs #3092. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 G.gallus:253

F6WX23              	100.00%		Q5ZLE6              	100.00%
Bootstrap support for F6WX23 as seed ortholog is 100%.
Bootstrap support for Q5ZLE6 as seed ortholog is 100%.

Group of orthologs #3093. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:253

H2XLX4              	100.00%		Q5ZHL5              	100.00%
Bootstrap support for H2XLX4 as seed ortholog is 100%.
Bootstrap support for Q5ZHL5 as seed ortholog is 100%.

Group of orthologs #3094. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 G.gallus:252

F6ZTV7              	100.00%		E1C6E4              	100.00%
Bootstrap support for F6ZTV7 as seed ortholog is 100%.
Bootstrap support for E1C6E4 as seed ortholog is 100%.

Group of orthologs #3095. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 G.gallus:252

H2XQU3              	100.00%		E1C6L0              	100.00%
Bootstrap support for H2XQU3 as seed ortholog is 100%.
Bootstrap support for E1C6L0 as seed ortholog is 100%.

Group of orthologs #3096. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 G.gallus:119

H2XS72              	100.00%		E1C522              	100.00%
Bootstrap support for H2XS72 as seed ortholog is 100%.
Bootstrap support for E1C522 as seed ortholog is 99%.

Group of orthologs #3097. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 G.gallus:252

F6ZBY5              	100.00%		F1NR86              	100.00%
Bootstrap support for F6ZBY5 as seed ortholog is 100%.
Bootstrap support for F1NR86 as seed ortholog is 100%.

Group of orthologs #3098. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 G.gallus:252

F6YJB7              	100.00%		P27089              	100.00%
Bootstrap support for F6YJB7 as seed ortholog is 100%.
Bootstrap support for P27089 as seed ortholog is 100%.

Group of orthologs #3099. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:144

H2XNN6              	100.00%		F1NZZ1              	100.00%
Bootstrap support for H2XNN6 as seed ortholog is 100%.
Bootstrap support for F1NZZ1 as seed ortholog is 100%.

Group of orthologs #3100. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 G.gallus:252

H2XWR7              	100.00%		F1NNQ1              	100.00%
Bootstrap support for H2XWR7 as seed ortholog is 100%.
Bootstrap support for F1NNQ1 as seed ortholog is 100%.

Group of orthologs #3101. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 G.gallus:252

H2XVJ7              	100.00%		F1NSL8              	100.00%
Bootstrap support for H2XVJ7 as seed ortholog is 100%.
Bootstrap support for F1NSL8 as seed ortholog is 100%.

Group of orthologs #3102. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:35

H2Y3T6              	100.00%		Q5ZIW8              	100.00%
Bootstrap support for H2Y3T6 as seed ortholog is 99%.
Bootstrap support for Q5ZIW8 as seed ortholog is 94%.

Group of orthologs #3103. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:115

F6XGK4              	100.00%		F1NIB2              	100.00%
                    	       		F1NCW4              	48.88%
                    	       		Q5ZI72              	40.26%
Bootstrap support for F6XGK4 as seed ortholog is 55%.
Alternative seed ortholog is F6TNN9 (70 bits away from this cluster)
Bootstrap support for F1NIB2 as seed ortholog is 97%.

Group of orthologs #3104. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 G.gallus:251

H2XUA2              	100.00%		F1NRQ2              	100.00%
                    	       		E1BYD4              	49.81%
                    	       		F1NCZ8              	40.35%
Bootstrap support for H2XUA2 as seed ortholog is 100%.
Bootstrap support for F1NRQ2 as seed ortholog is 100%.

Group of orthologs #3105. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 G.gallus:251

F6ZWT9              	100.00%		E1C9I2              	100.00%
                    	       		E1C428              	15.28%
Bootstrap support for F6ZWT9 as seed ortholog is 100%.
Bootstrap support for E1C9I2 as seed ortholog is 100%.

Group of orthologs #3106. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 G.gallus:46

Q4H301              	100.00%		F1P1U2              	100.00%
                    	       		F1N8Z7              	42.75%
Bootstrap support for Q4H301 as seed ortholog is 100%.
Bootstrap support for F1P1U2 as seed ortholog is 88%.

Group of orthologs #3107. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 G.gallus:251

F6TDS0              	100.00%		F1NCY9              	100.00%
Bootstrap support for F6TDS0 as seed ortholog is 100%.
Bootstrap support for F1NCY9 as seed ortholog is 100%.

Group of orthologs #3108. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:251

F6PSK8              	100.00%		F1P574              	100.00%
Bootstrap support for F6PSK8 as seed ortholog is 99%.
Bootstrap support for F1P574 as seed ortholog is 100%.

Group of orthologs #3109. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 G.gallus:251

F6VBS7              	100.00%		F1NS88              	100.00%
Bootstrap support for F6VBS7 as seed ortholog is 100%.
Bootstrap support for F1NS88 as seed ortholog is 100%.

Group of orthologs #3110. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 G.gallus:251

Q4H2I7              	100.00%		E1C275              	100.00%
Bootstrap support for Q4H2I7 as seed ortholog is 100%.
Bootstrap support for E1C275 as seed ortholog is 100%.

Group of orthologs #3111. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 G.gallus:251

H2XUJ8              	100.00%		F1NMU5              	100.00%
Bootstrap support for H2XUJ8 as seed ortholog is 98%.
Bootstrap support for F1NMU5 as seed ortholog is 100%.

Group of orthologs #3112. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 G.gallus:251

H2XQQ0              	100.00%		Q5ZLX5              	100.00%
Bootstrap support for H2XQQ0 as seed ortholog is 100%.
Bootstrap support for Q5ZLX5 as seed ortholog is 100%.

Group of orthologs #3113. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 G.gallus:251

Q3MQ22              	100.00%		Q5ZHW2              	100.00%
Bootstrap support for Q3MQ22 as seed ortholog is 100%.
Bootstrap support for Q5ZHW2 as seed ortholog is 100%.

Group of orthologs #3114. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 G.gallus:250

F6ZNE7              	100.00%		E1BX36              	100.00%
                    	       		F1NJE1              	11.21%
                    	       		F1NA14              	8.97%
Bootstrap support for F6ZNE7 as seed ortholog is 100%.
Bootstrap support for E1BX36 as seed ortholog is 100%.

Group of orthologs #3115. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 G.gallus:107

F6ZHQ2              	100.00%		E1BVF5              	100.00%
                    	       		Q5ZMI5              	100.00%
Bootstrap support for F6ZHQ2 as seed ortholog is 99%.
Bootstrap support for E1BVF5 as seed ortholog is 99%.
Bootstrap support for Q5ZMI5 as seed ortholog is 99%.

Group of orthologs #3116. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 G.gallus:250

F6WQJ1              	100.00%		E1C0R0              	100.00%
Bootstrap support for F6WQJ1 as seed ortholog is 100%.
Bootstrap support for E1C0R0 as seed ortholog is 100%.

Group of orthologs #3117. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 G.gallus:250

F6TUV6              	100.00%		E1C948              	100.00%
Bootstrap support for F6TUV6 as seed ortholog is 100%.
Bootstrap support for E1C948 as seed ortholog is 100%.

Group of orthologs #3118. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 G.gallus:84

F6TZK8              	100.00%		F1NJJ6              	100.00%
Bootstrap support for F6TZK8 as seed ortholog is 100%.
Bootstrap support for F1NJJ6 as seed ortholog is 99%.

Group of orthologs #3119. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 G.gallus:250

H2XNJ5              	100.00%		E1BSG7              	100.00%
Bootstrap support for H2XNJ5 as seed ortholog is 100%.
Bootstrap support for E1BSG7 as seed ortholog is 100%.

Group of orthologs #3120. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 G.gallus:250

F6Y6X7              	100.00%		F1NBX4              	100.00%
Bootstrap support for F6Y6X7 as seed ortholog is 100%.
Bootstrap support for F1NBX4 as seed ortholog is 100%.

Group of orthologs #3121. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 G.gallus:250

F6QR18              	100.00%		F1P537              	100.00%
Bootstrap support for F6QR18 as seed ortholog is 100%.
Bootstrap support for F1P537 as seed ortholog is 100%.

Group of orthologs #3122. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 G.gallus:250

F6XGG4              	100.00%		F1NJ73              	100.00%
Bootstrap support for F6XGG4 as seed ortholog is 100%.
Bootstrap support for F1NJ73 as seed ortholog is 100%.

Group of orthologs #3123. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 G.gallus:250

H2XZ71              	100.00%		E1BUA2              	100.00%
Bootstrap support for H2XZ71 as seed ortholog is 100%.
Bootstrap support for E1BUA2 as seed ortholog is 100%.

Group of orthologs #3124. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:250

F6T1T3              	100.00%		Q5ZIG3              	100.00%
Bootstrap support for F6T1T3 as seed ortholog is 100%.
Bootstrap support for Q5ZIG3 as seed ortholog is 100%.

Group of orthologs #3125. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 G.gallus:126

H2Y2V1              	100.00%		E1C133              	100.00%
Bootstrap support for H2Y2V1 as seed ortholog is 100%.
Bootstrap support for E1C133 as seed ortholog is 99%.

Group of orthologs #3126. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 G.gallus:250

H2Y061              	100.00%		F1NYV4              	100.00%
Bootstrap support for H2Y061 as seed ortholog is 100%.
Bootstrap support for F1NYV4 as seed ortholog is 100%.

Group of orthologs #3127. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 G.gallus:249

F6WH38              	100.00%		E1C4X8              	100.00%
                    	       		F1NAU4              	64.88%
                    	       		E1BYX9              	49.37%
Bootstrap support for F6WH38 as seed ortholog is 100%.
Bootstrap support for E1C4X8 as seed ortholog is 100%.

Group of orthologs #3128. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 G.gallus:185

F7A765              	100.00%		F1P557              	100.00%
                    	       		F1NB31              	12.60%
Bootstrap support for F7A765 as seed ortholog is 100%.
Bootstrap support for F1P557 as seed ortholog is 100%.

Group of orthologs #3129. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 G.gallus:249

H2Y3S7              	100.00%		Q5ZLS5              	100.00%
                    	       		F1NBA3              	27.35%
Bootstrap support for H2Y3S7 as seed ortholog is 100%.
Bootstrap support for Q5ZLS5 as seed ortholog is 100%.

Group of orthologs #3130. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 G.gallus:249

F6UA18              	100.00%		E1BRW7              	100.00%
Bootstrap support for F6UA18 as seed ortholog is 100%.
Bootstrap support for E1BRW7 as seed ortholog is 100%.

Group of orthologs #3131. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 G.gallus:249

H2XWF6              	100.00%		F1NFX3              	100.00%
Bootstrap support for H2XWF6 as seed ortholog is 100%.
Bootstrap support for F1NFX3 as seed ortholog is 100%.

Group of orthologs #3132. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 G.gallus:85

H2XUE7              	100.00%		Q5ZJP7              	100.00%
Bootstrap support for H2XUE7 as seed ortholog is 100%.
Bootstrap support for Q5ZJP7 as seed ortholog is 99%.

Group of orthologs #3133. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:32

F6USY0              	100.00%		F1NAZ2              	100.00%
                    	       		F1NX43              	8.57%
                    	       		E1BZQ1              	7.25%
                    	       		E1C3Z3              	5.27%
Bootstrap support for F6USY0 as seed ortholog is 83%.
Bootstrap support for F1NAZ2 as seed ortholog is 76%.

Group of orthologs #3134. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 G.gallus:248

F6VXD9              	100.00%		E1C4J3              	100.00%
                    	       		Q90867              	37.09%
Bootstrap support for F6VXD9 as seed ortholog is 100%.
Bootstrap support for E1C4J3 as seed ortholog is 100%.

Group of orthologs #3135. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 G.gallus:126

F6S569              	100.00%		E1C909              	100.00%
Bootstrap support for F6S569 as seed ortholog is 100%.
Bootstrap support for E1C909 as seed ortholog is 100%.

Group of orthologs #3136. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 G.gallus:248

F6ZQX9              	100.00%		F1NPD3              	100.00%
Bootstrap support for F6ZQX9 as seed ortholog is 100%.
Bootstrap support for F1NPD3 as seed ortholog is 100%.

Group of orthologs #3137. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 G.gallus:248

F6Z599              	100.00%		H9L0M5              	100.00%
Bootstrap support for F6Z599 as seed ortholog is 100%.
Bootstrap support for H9L0M5 as seed ortholog is 100%.

Group of orthologs #3138. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 G.gallus:248

H2XQ41              	100.00%		F1NWB9              	100.00%
Bootstrap support for H2XQ41 as seed ortholog is 100%.
Bootstrap support for F1NWB9 as seed ortholog is 100%.

Group of orthologs #3139. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 G.gallus:247

F6R1Q7              	100.00%		F1P042              	100.00%
                    	       		Q5ZIV7              	100.00%
Bootstrap support for F6R1Q7 as seed ortholog is 100%.
Bootstrap support for F1P042 as seed ortholog is 100%.
Bootstrap support for Q5ZIV7 as seed ortholog is 100%.

Group of orthologs #3140. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:194

F6W912              	100.00%		Q5ZK47              	100.00%
                    	       		E1BXT2              	15.06%
Bootstrap support for F6W912 as seed ortholog is 100%.
Bootstrap support for Q5ZK47 as seed ortholog is 100%.

Group of orthologs #3141. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 G.gallus:247

F6TQR9              	100.00%		F1NMS4              	100.00%
Bootstrap support for F6TQR9 as seed ortholog is 100%.
Bootstrap support for F1NMS4 as seed ortholog is 100%.

Group of orthologs #3142. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 G.gallus:247

F6TQ55              	100.00%		F1P283              	100.00%
Bootstrap support for F6TQ55 as seed ortholog is 100%.
Bootstrap support for F1P283 as seed ortholog is 100%.

Group of orthologs #3143. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 G.gallus:247

F6UTA8              	100.00%		F1P5D8              	100.00%
Bootstrap support for F6UTA8 as seed ortholog is 100%.
Bootstrap support for F1P5D8 as seed ortholog is 100%.

Group of orthologs #3144. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 G.gallus:247

F6R5Q7              	100.00%		Q9DE13              	100.00%
Bootstrap support for F6R5Q7 as seed ortholog is 100%.
Bootstrap support for Q9DE13 as seed ortholog is 100%.

Group of orthologs #3145. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 G.gallus:247

H2XWI8              	100.00%		F1NBF8              	100.00%
Bootstrap support for H2XWI8 as seed ortholog is 100%.
Bootstrap support for F1NBF8 as seed ortholog is 100%.

Group of orthologs #3146. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 G.gallus:34

F6X4N7              	100.00%		E1BR80              	100.00%
                    	       		E1BTX9              	35.77%
Bootstrap support for F6X4N7 as seed ortholog is 62%.
Alternative seed ortholog is F7B991 (90 bits away from this cluster)
Bootstrap support for E1BR80 as seed ortholog is 97%.

Group of orthologs #3147. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 G.gallus:132

F7AMQ9              	100.00%		F1NBN3              	100.00%
                    	       		E1BR96              	15.11%
Bootstrap support for F7AMQ9 as seed ortholog is 38%.
Alternative seed ortholog is F6XJ57 (8 bits away from this cluster)
Bootstrap support for F1NBN3 as seed ortholog is 99%.

Group of orthologs #3148. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 G.gallus:246

H2XJX5              	100.00%		F1NQJ7              	100.00%
F6QRT7              	10.29%		
Bootstrap support for H2XJX5 as seed ortholog is 100%.
Bootstrap support for F1NQJ7 as seed ortholog is 100%.

Group of orthologs #3149. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:246

F7AZY9              	100.00%		E1BTL6              	100.00%
Bootstrap support for F7AZY9 as seed ortholog is 99%.
Bootstrap support for E1BTL6 as seed ortholog is 100%.

Group of orthologs #3150. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 G.gallus:246

F6RE18              	100.00%		H9KZF8              	100.00%
Bootstrap support for F6RE18 as seed ortholog is 100%.
Bootstrap support for H9KZF8 as seed ortholog is 100%.

Group of orthologs #3151. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 G.gallus:246

F6YSG2              	100.00%		F1NQ13              	100.00%
Bootstrap support for F6YSG2 as seed ortholog is 100%.
Bootstrap support for F1NQ13 as seed ortholog is 100%.

Group of orthologs #3152. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 G.gallus:246

Q8SSZ0              	100.00%		E1BRH7              	100.00%
Bootstrap support for Q8SSZ0 as seed ortholog is 100%.
Bootstrap support for E1BRH7 as seed ortholog is 100%.

Group of orthologs #3153. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 G.gallus:246

H2XXD0              	100.00%		F1P1H6              	100.00%
Bootstrap support for H2XXD0 as seed ortholog is 100%.
Bootstrap support for F1P1H6 as seed ortholog is 100%.

Group of orthologs #3154. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 G.gallus:246

F7BJ17              	100.00%		Q90678              	100.00%
Bootstrap support for F7BJ17 as seed ortholog is 100%.
Bootstrap support for Q90678 as seed ortholog is 100%.

Group of orthologs #3155. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 G.gallus:245

H2XVP4              	100.00%		F1NIQ4              	100.00%
                    	       		O12940              	43.67%
Bootstrap support for H2XVP4 as seed ortholog is 100%.
Bootstrap support for F1NIQ4 as seed ortholog is 100%.

Group of orthologs #3156. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 G.gallus:245

F7AD34              	100.00%		Q9I923              	100.00%
                    	       		E1BW75              	46.90%
Bootstrap support for F7AD34 as seed ortholog is 100%.
Bootstrap support for Q9I923 as seed ortholog is 100%.

Group of orthologs #3157. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 G.gallus:245

F6RGI4              	100.00%		E1BTG1              	100.00%
Bootstrap support for F6RGI4 as seed ortholog is 100%.
Bootstrap support for E1BTG1 as seed ortholog is 100%.

Group of orthologs #3158. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 G.gallus:245

F6SCR3              	100.00%		F1NFQ3              	100.00%
Bootstrap support for F6SCR3 as seed ortholog is 100%.
Bootstrap support for F1NFQ3 as seed ortholog is 100%.

Group of orthologs #3159. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 G.gallus:245

F7ASV3              	100.00%		E1C9D5              	100.00%
Bootstrap support for F7ASV3 as seed ortholog is 100%.
Bootstrap support for E1C9D5 as seed ortholog is 100%.

Group of orthologs #3160. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 G.gallus:245

F6SFB8              	100.00%		H9L0L3              	100.00%
Bootstrap support for F6SFB8 as seed ortholog is 100%.
Bootstrap support for H9L0L3 as seed ortholog is 100%.

Group of orthologs #3161. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 G.gallus:245

F6UU89              	100.00%		F1P3X8              	100.00%
Bootstrap support for F6UU89 as seed ortholog is 100%.
Bootstrap support for F1P3X8 as seed ortholog is 100%.

Group of orthologs #3162. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 G.gallus:245

F6QZ12              	100.00%		Q5ZLS8              	100.00%
Bootstrap support for F6QZ12 as seed ortholog is 100%.
Bootstrap support for Q5ZLS8 as seed ortholog is 100%.

Group of orthologs #3163. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 G.gallus:147

F6Y7N9              	100.00%		F1P1V0              	100.00%
Bootstrap support for F6Y7N9 as seed ortholog is 100%.
Bootstrap support for F1P1V0 as seed ortholog is 99%.

Group of orthologs #3164. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 G.gallus:245

F6YVR5              	100.00%		Q5ZKM6              	100.00%
Bootstrap support for F6YVR5 as seed ortholog is 100%.
Bootstrap support for Q5ZKM6 as seed ortholog is 100%.

Group of orthologs #3165. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 G.gallus:244

F7AWW1              	100.00%		E1BXT3              	100.00%
Bootstrap support for F7AWW1 as seed ortholog is 100%.
Bootstrap support for E1BXT3 as seed ortholog is 100%.

Group of orthologs #3166. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 G.gallus:16

F6Z4F9              	100.00%		E1C7P4              	100.00%
Bootstrap support for F6Z4F9 as seed ortholog is 69%.
Alternative seed ortholog is H2Y1L6 (40 bits away from this cluster)
Bootstrap support for E1C7P4 as seed ortholog is 60%.
Alternative seed ortholog is F1P2M6 (16 bits away from this cluster)

Group of orthologs #3167. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:195

F7AZA1              	100.00%		E1C474              	100.00%
Bootstrap support for F7AZA1 as seed ortholog is 100%.
Bootstrap support for E1C474 as seed ortholog is 100%.

Group of orthologs #3168. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 G.gallus:244

H2XYY9              	100.00%		E1C1V5              	100.00%
Bootstrap support for H2XYY9 as seed ortholog is 100%.
Bootstrap support for E1C1V5 as seed ortholog is 100%.

Group of orthologs #3169. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 G.gallus:243

H2XNI2              	100.00%		F1NXK8              	100.00%
                    	       		Q5ZIQ1              	44.60%
                    	       		F1NLG3              	33.81%
Bootstrap support for H2XNI2 as seed ortholog is 100%.
Bootstrap support for F1NXK8 as seed ortholog is 100%.

Group of orthologs #3170. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 G.gallus:18

F6Y0J0              	100.00%		E1BSJ1              	100.00%
                    	       		E1C5G3              	73.79%
Bootstrap support for F6Y0J0 as seed ortholog is 99%.
Bootstrap support for E1BSJ1 as seed ortholog is 72%.
Alternative seed ortholog is Q9YIB9 (18 bits away from this cluster)

Group of orthologs #3171. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 G.gallus:4

F7AEF7              	100.00%		F1NDA6              	100.00%
                    	       		F1NAR8              	16.13%
Bootstrap support for F7AEF7 as seed ortholog is 91%.
Bootstrap support for F1NDA6 as seed ortholog is 70%.
Alternative seed ortholog is F1P4J7 (4 bits away from this cluster)

Group of orthologs #3172. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 G.gallus:154

F6TTC3              	100.00%		E1C6Q6              	100.00%
Bootstrap support for F6TTC3 as seed ortholog is 100%.
Bootstrap support for E1C6Q6 as seed ortholog is 100%.

Group of orthologs #3173. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:243

F6W3K8              	100.00%		E1C1Z9              	100.00%
Bootstrap support for F6W3K8 as seed ortholog is 100%.
Bootstrap support for E1C1Z9 as seed ortholog is 100%.

Group of orthologs #3174. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 G.gallus:243

H2XXS5              	100.00%		E1BUT5              	100.00%
Bootstrap support for H2XXS5 as seed ortholog is 100%.
Bootstrap support for E1BUT5 as seed ortholog is 100%.

Group of orthologs #3175. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 G.gallus:243

F6WB92              	100.00%		F1NZ60              	100.00%
Bootstrap support for F6WB92 as seed ortholog is 100%.
Bootstrap support for F1NZ60 as seed ortholog is 100%.

Group of orthologs #3176. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:242

F6Q7C4              	100.00%		F1NEX0              	100.00%
                    	       		Q9IA03              	46.10%
Bootstrap support for F6Q7C4 as seed ortholog is 99%.
Bootstrap support for F1NEX0 as seed ortholog is 100%.

Group of orthologs #3177. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 G.gallus:178

F6Q8X5              	100.00%		F1NW17              	100.00%
                    	       		F1NFA6              	30.72%
Bootstrap support for F6Q8X5 as seed ortholog is 99%.
Bootstrap support for F1NW17 as seed ortholog is 100%.

Group of orthologs #3178. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 G.gallus:242

F6VDY1              	100.00%		F1NL82              	100.00%
                    	       		F1NMC4              	33.88%
Bootstrap support for F6VDY1 as seed ortholog is 100%.
Bootstrap support for F1NL82 as seed ortholog is 100%.

Group of orthologs #3179. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 G.gallus:242

F6XMI0              	100.00%		Q9PWE8              	100.00%
                    	       		E1C1W2              	22.80%
Bootstrap support for F6XMI0 as seed ortholog is 100%.
Bootstrap support for Q9PWE8 as seed ortholog is 100%.

Group of orthologs #3180. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 G.gallus:242

F6Y3N8              	100.00%		E1BRF5              	100.00%
Bootstrap support for F6Y3N8 as seed ortholog is 100%.
Bootstrap support for E1BRF5 as seed ortholog is 100%.

Group of orthologs #3181. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:82

F6RZT0              	100.00%		F1NEL6              	100.00%
Bootstrap support for F6RZT0 as seed ortholog is 99%.
Bootstrap support for F1NEL6 as seed ortholog is 99%.

Group of orthologs #3182. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 G.gallus:0

F6Q874              	100.00%		F1NLE0              	100.00%
Bootstrap support for F6Q874 as seed ortholog is 100%.
Bootstrap support for F1NLE0 as seed ortholog is 56%.
Alternative seed ortholog is F1P5I9 (0 bits away from this cluster)

Group of orthologs #3183. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 G.gallus:242

F6ZN66              	100.00%		E1BUZ8              	100.00%
Bootstrap support for F6ZN66 as seed ortholog is 100%.
Bootstrap support for E1BUZ8 as seed ortholog is 100%.

Group of orthologs #3184. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 G.gallus:242

F6WYD9              	100.00%		E1C642              	100.00%
Bootstrap support for F6WYD9 as seed ortholog is 100%.
Bootstrap support for E1C642 as seed ortholog is 100%.

Group of orthologs #3185. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 G.gallus:242

F6XWU5              	100.00%		E1C460              	100.00%
Bootstrap support for F6XWU5 as seed ortholog is 100%.
Bootstrap support for E1C460 as seed ortholog is 100%.

Group of orthologs #3186. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 G.gallus:242

F6TL19              	100.00%		F1P1Z7              	100.00%
Bootstrap support for F6TL19 as seed ortholog is 100%.
Bootstrap support for F1P1Z7 as seed ortholog is 100%.

Group of orthologs #3187. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 G.gallus:242

F6VN25              	100.00%		F1P0J7              	100.00%
Bootstrap support for F6VN25 as seed ortholog is 100%.
Bootstrap support for F1P0J7 as seed ortholog is 100%.

Group of orthologs #3188. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 G.gallus:98

F6VUE2              	100.00%		H9KZF0              	100.00%
Bootstrap support for F6VUE2 as seed ortholog is 81%.
Bootstrap support for H9KZF0 as seed ortholog is 99%.

Group of orthologs #3189. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 G.gallus:242

F6ZPU3              	100.00%		Q5F359              	100.00%
Bootstrap support for F6ZPU3 as seed ortholog is 100%.
Bootstrap support for Q5F359 as seed ortholog is 100%.

Group of orthologs #3190. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 G.gallus:242

H2XVU3              	100.00%		F1NW98              	100.00%
Bootstrap support for H2XVU3 as seed ortholog is 100%.
Bootstrap support for F1NW98 as seed ortholog is 100%.

Group of orthologs #3191. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 G.gallus:241

F6UNM5              	100.00%		E1BVU6              	100.00%
                    	       		F1NPL3              	66.74%
                    	       		H9L011              	17.80%
Bootstrap support for F6UNM5 as seed ortholog is 100%.
Bootstrap support for E1BVU6 as seed ortholog is 100%.

Group of orthologs #3192. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 G.gallus:241

H2XLA1              	100.00%		E1BQN3              	100.00%
                    	       		Q8QFN3              	45.55%
Bootstrap support for H2XLA1 as seed ortholog is 100%.
Bootstrap support for E1BQN3 as seed ortholog is 100%.

Group of orthologs #3193. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 G.gallus:241

F6YDB9              	100.00%		F1NHY3              	100.00%
                    	       		F1P1K8              	19.20%
Bootstrap support for F6YDB9 as seed ortholog is 100%.
Bootstrap support for F1NHY3 as seed ortholog is 100%.

Group of orthologs #3194. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 G.gallus:241

F6SEF1              	100.00%		E1BXD0              	100.00%
Bootstrap support for F6SEF1 as seed ortholog is 100%.
Bootstrap support for E1BXD0 as seed ortholog is 100%.

Group of orthologs #3195. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 G.gallus:241

H2XWZ6              	100.00%		E1C4T9              	100.00%
Bootstrap support for H2XWZ6 as seed ortholog is 100%.
Bootstrap support for E1C4T9 as seed ortholog is 100%.

Group of orthologs #3196. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 G.gallus:241

F7B383              	100.00%		F1NRT4              	100.00%
Bootstrap support for F7B383 as seed ortholog is 100%.
Bootstrap support for F1NRT4 as seed ortholog is 100%.

Group of orthologs #3197. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 G.gallus:241

F6XQ02              	100.00%		F1P5N7              	100.00%
Bootstrap support for F6XQ02 as seed ortholog is 100%.
Bootstrap support for F1P5N7 as seed ortholog is 100%.

Group of orthologs #3198. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 G.gallus:241

F6VN10              	100.00%		P05081              	100.00%
Bootstrap support for F6VN10 as seed ortholog is 100%.
Bootstrap support for P05081 as seed ortholog is 100%.

Group of orthologs #3199. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 G.gallus:241

F7AG43              	100.00%		Q5ZKJ9              	100.00%
Bootstrap support for F7AG43 as seed ortholog is 100%.
Bootstrap support for Q5ZKJ9 as seed ortholog is 100%.

Group of orthologs #3200. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 G.gallus:165

Q1RL21              	100.00%		F1NYU5              	100.00%
F6WI19              	79.17%		E1C0K9              	34.87%
Q1RL20              	74.44%		
H2XMP0              	62.50%		
H2XZ50              	53.89%		
Bootstrap support for Q1RL21 as seed ortholog is 100%.
Bootstrap support for F1NYU5 as seed ortholog is 100%.

Group of orthologs #3201. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 G.gallus:240

F7A786              	100.00%		F1NX66              	100.00%
F6U621              	50.32%		
F7A0S5              	31.29%		
Bootstrap support for F7A786 as seed ortholog is 76%.
Bootstrap support for F1NX66 as seed ortholog is 100%.

Group of orthologs #3202. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 G.gallus:240

H2XMF7              	100.00%		F1P324              	100.00%
                    	       		Q90977              	6.86%
Bootstrap support for H2XMF7 as seed ortholog is 100%.
Bootstrap support for F1P324 as seed ortholog is 100%.

Group of orthologs #3203. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 G.gallus:240

F6QPL4              	100.00%		F1NIB6              	100.00%
Bootstrap support for F6QPL4 as seed ortholog is 100%.
Bootstrap support for F1NIB6 as seed ortholog is 100%.

Group of orthologs #3204. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 G.gallus:240

F6WN20              	100.00%		E1C400              	100.00%
Bootstrap support for F6WN20 as seed ortholog is 100%.
Bootstrap support for E1C400 as seed ortholog is 100%.

Group of orthologs #3205. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 G.gallus:240

F6SNU1              	100.00%		F1NP85              	100.00%
Bootstrap support for F6SNU1 as seed ortholog is 100%.
Bootstrap support for F1NP85 as seed ortholog is 100%.

Group of orthologs #3206. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 G.gallus:240

F6WZJ4              	100.00%		F1NBH6              	100.00%
Bootstrap support for F6WZJ4 as seed ortholog is 100%.
Bootstrap support for F1NBH6 as seed ortholog is 100%.

Group of orthologs #3207. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 G.gallus:240

H2XLD2              	100.00%		E1C8F5              	100.00%
Bootstrap support for H2XLD2 as seed ortholog is 84%.
Bootstrap support for E1C8F5 as seed ortholog is 100%.

Group of orthologs #3208. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 G.gallus:126

F7BPH5              	100.00%		F1N9X0              	100.00%
Bootstrap support for F7BPH5 as seed ortholog is 82%.
Bootstrap support for F1N9X0 as seed ortholog is 99%.

Group of orthologs #3209. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 G.gallus:183

F6X1A2              	100.00%		F1P5H1              	100.00%
Bootstrap support for F6X1A2 as seed ortholog is 100%.
Bootstrap support for F1P5H1 as seed ortholog is 100%.

Group of orthologs #3210. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 G.gallus:240

H2XXH1              	100.00%		F1NBU1              	100.00%
Bootstrap support for H2XXH1 as seed ortholog is 100%.
Bootstrap support for F1NBU1 as seed ortholog is 100%.

Group of orthologs #3211. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 G.gallus:240

F6WUA7              	100.00%		Q5F3Z5              	100.00%
Bootstrap support for F6WUA7 as seed ortholog is 100%.
Bootstrap support for Q5F3Z5 as seed ortholog is 100%.

Group of orthologs #3212. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 G.gallus:240

F6X915              	100.00%		Q27IP4              	100.00%
Bootstrap support for F6X915 as seed ortholog is 100%.
Bootstrap support for Q27IP4 as seed ortholog is 100%.

Group of orthologs #3213. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 G.gallus:240

H2XQ06              	100.00%		Q5ZHK8              	100.00%
Bootstrap support for H2XQ06 as seed ortholog is 100%.
Bootstrap support for Q5ZHK8 as seed ortholog is 100%.

Group of orthologs #3214. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 G.gallus:168

Q8T893              	100.00%		F1NVA6              	100.00%
Bootstrap support for Q8T893 as seed ortholog is 100%.
Bootstrap support for F1NVA6 as seed ortholog is 100%.

Group of orthologs #3215. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 G.gallus:240

H2Y233              	100.00%		Q5ZKR5              	100.00%
Bootstrap support for H2Y233 as seed ortholog is 100%.
Bootstrap support for Q5ZKR5 as seed ortholog is 100%.

Group of orthologs #3216. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:239

F6SPW4              	100.00%		F1NCN3              	100.00%
                    	       		E1C0K5              	46.84%
Bootstrap support for F6SPW4 as seed ortholog is 100%.
Bootstrap support for F1NCN3 as seed ortholog is 100%.

Group of orthologs #3217. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:239

F6QSC7              	100.00%		F1NY51              	100.00%
                    	       		F1NIT5              	5.65%
Bootstrap support for F6QSC7 as seed ortholog is 100%.
Bootstrap support for F1NY51 as seed ortholog is 100%.

Group of orthologs #3218. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:128

F6RLX1              	100.00%		P02272              	100.00%
                    	       		Q5ZMD6              	40.00%
Bootstrap support for F6RLX1 as seed ortholog is 100%.
Bootstrap support for P02272 as seed ortholog is 100%.

Group of orthologs #3219. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:239

P61802              	100.00%		P61798              	100.00%
F6TMD1              	97.56%		
Bootstrap support for P61802 as seed ortholog is 100%.
Bootstrap support for P61798 as seed ortholog is 100%.

Group of orthologs #3220. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:239

F7AX45              	100.00%		E1BSD8              	100.00%
Bootstrap support for F7AX45 as seed ortholog is 100%.
Bootstrap support for E1BSD8 as seed ortholog is 100%.

Group of orthologs #3221. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:239

F6ZE91              	100.00%		F1N9Q2              	100.00%
Bootstrap support for F6ZE91 as seed ortholog is 100%.
Bootstrap support for F1N9Q2 as seed ortholog is 100%.

Group of orthologs #3222. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 G.gallus:239

F6S2W5              	100.00%		F1P117              	100.00%
Bootstrap support for F6S2W5 as seed ortholog is 100%.
Bootstrap support for F1P117 as seed ortholog is 100%.

Group of orthologs #3223. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:239

F6XS68              	100.00%		F1NQZ4              	100.00%
Bootstrap support for F6XS68 as seed ortholog is 100%.
Bootstrap support for F1NQZ4 as seed ortholog is 100%.

Group of orthologs #3224. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:136

H2Y2K0              	100.00%		E1BWU4              	100.00%
Bootstrap support for H2Y2K0 as seed ortholog is 100%.
Bootstrap support for E1BWU4 as seed ortholog is 99%.

Group of orthologs #3225. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:239

F7AES2              	100.00%		F1NVA9              	100.00%
Bootstrap support for F7AES2 as seed ortholog is 100%.
Bootstrap support for F1NVA9 as seed ortholog is 100%.

Group of orthologs #3226. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:239

F6W7H5              	100.00%		Q5ZJN1              	100.00%
Bootstrap support for F6W7H5 as seed ortholog is 100%.
Bootstrap support for Q5ZJN1 as seed ortholog is 100%.

Group of orthologs #3227. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:239

F6WS42              	100.00%		Q5ZKP2              	100.00%
Bootstrap support for F6WS42 as seed ortholog is 100%.
Bootstrap support for Q5ZKP2 as seed ortholog is 100%.

Group of orthologs #3228. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 G.gallus:239

F7B2L3              	100.00%		P62846              	100.00%
Bootstrap support for F7B2L3 as seed ortholog is 100%.
Bootstrap support for P62846 as seed ortholog is 100%.

Group of orthologs #3229. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 G.gallus:91

F6UWG2              	100.00%		F1N9P3              	100.00%
F7BHL3              	100.00%		F1NP19              	100.00%
F6WT44              	96.07%		E1C987              	90.10%
F6VJ33              	44.64%		E1C993              	89.08%
                    	       		F1NNP5              	77.82%
Bootstrap support for F6UWG2 as seed ortholog is 99%.
Bootstrap support for F7BHL3 as seed ortholog is 98%.
Bootstrap support for F1N9P3 as seed ortholog is 99%.
Bootstrap support for F1NP19 as seed ortholog is 96%.

Group of orthologs #3230. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 G.gallus:31

F7BBQ5              	100.00%		O57535              	100.00%
F6YB01              	11.22%		F1N910              	49.37%
Bootstrap support for F7BBQ5 as seed ortholog is 100%.
Bootstrap support for O57535 as seed ortholog is 95%.

Group of orthologs #3231. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 G.gallus:238

F6Y9G2              	100.00%		E1BQA7              	100.00%
                    	       		E1BQZ3              	42.20%
Bootstrap support for F6Y9G2 as seed ortholog is 100%.
Bootstrap support for E1BQA7 as seed ortholog is 100%.

Group of orthologs #3232. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 G.gallus:238

F6W2W3              	100.00%		F1NIK9              	100.00%
                    	       		F1NIC7              	11.96%
Bootstrap support for F6W2W3 as seed ortholog is 100%.
Bootstrap support for F1NIK9 as seed ortholog is 100%.

Group of orthologs #3233. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 G.gallus:238

H2XPV5              	100.00%		Q5ZI66              	100.00%
                    	       		F1NE73              	96.10%
Bootstrap support for H2XPV5 as seed ortholog is 100%.
Bootstrap support for Q5ZI66 as seed ortholog is 100%.

Group of orthologs #3234. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 G.gallus:136

F6TCR0              	100.00%		E1BYZ8              	100.00%
Bootstrap support for F6TCR0 as seed ortholog is 99%.
Bootstrap support for E1BYZ8 as seed ortholog is 99%.

Group of orthologs #3235. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 G.gallus:238

F6WPK3              	100.00%		E1BQW2              	100.00%
Bootstrap support for F6WPK3 as seed ortholog is 100%.
Bootstrap support for E1BQW2 as seed ortholog is 100%.

Group of orthologs #3236. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 G.gallus:238

F6PN13              	100.00%		F1NUQ5              	100.00%
Bootstrap support for F6PN13 as seed ortholog is 100%.
Bootstrap support for F1NUQ5 as seed ortholog is 100%.

Group of orthologs #3237. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:238

F6TAR1              	100.00%		F1NL93              	100.00%
Bootstrap support for F6TAR1 as seed ortholog is 99%.
Bootstrap support for F1NL93 as seed ortholog is 100%.

Group of orthologs #3238. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 G.gallus:238

F6W5C2              	100.00%		F1NF92              	100.00%
Bootstrap support for F6W5C2 as seed ortholog is 100%.
Bootstrap support for F1NF92 as seed ortholog is 100%.

Group of orthologs #3239. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 G.gallus:92

F7B7A4              	100.00%		F1NWX5              	100.00%
Bootstrap support for F7B7A4 as seed ortholog is 99%.
Bootstrap support for F1NWX5 as seed ortholog is 99%.

Group of orthologs #3240. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 G.gallus:238

F6WUG3              	100.00%		Q5ZI42              	100.00%
Bootstrap support for F6WUG3 as seed ortholog is 100%.
Bootstrap support for Q5ZI42 as seed ortholog is 100%.

Group of orthologs #3241. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 G.gallus:60

H2XMV3              	100.00%		Q5F3I1              	100.00%
Bootstrap support for H2XMV3 as seed ortholog is 95%.
Bootstrap support for Q5F3I1 as seed ortholog is 96%.

Group of orthologs #3242. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:237

F6TRJ7              	100.00%		E1C862              	100.00%
                    	       		F1NEG9              	44.39%
                    	       		F1NBK6              	33.80%
Bootstrap support for F6TRJ7 as seed ortholog is 100%.
Bootstrap support for E1C862 as seed ortholog is 100%.

Group of orthologs #3243. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:237

F7A9Q6              	100.00%		Q5ZMN0              	100.00%
                    	       		E1C2A1              	30.72%
                    	       		Q5F4A3              	13.65%
Bootstrap support for F7A9Q6 as seed ortholog is 100%.
Bootstrap support for Q5ZMN0 as seed ortholog is 100%.

Group of orthologs #3244. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:237

F6VE75              	100.00%		E1C4N1              	100.00%
                    	       		H9KZ35              	19.05%
Bootstrap support for F6VE75 as seed ortholog is 100%.
Bootstrap support for E1C4N1 as seed ortholog is 100%.

Group of orthologs #3245. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:237

F6VS86              	100.00%		F1NLL5              	100.00%
                    	       		F1NQ29              	28.51%
Bootstrap support for F6VS86 as seed ortholog is 100%.
Bootstrap support for F1NLL5 as seed ortholog is 100%.

Group of orthologs #3246. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:237

F6X0F3              	100.00%		Q5ZLC7              	100.00%
                    	       		Q5ZKK1              	25.89%
Bootstrap support for F6X0F3 as seed ortholog is 100%.
Bootstrap support for Q5ZLC7 as seed ortholog is 100%.

Group of orthologs #3247. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:237

F6VV86              	100.00%		E1BSZ7              	100.00%
Bootstrap support for F6VV86 as seed ortholog is 100%.
Bootstrap support for E1BSZ7 as seed ortholog is 100%.

Group of orthologs #3248. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:237

F6U6C0              	100.00%		E1BYI6              	100.00%
Bootstrap support for F6U6C0 as seed ortholog is 100%.
Bootstrap support for E1BYI6 as seed ortholog is 100%.

Group of orthologs #3249. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:237

F6X5V4              	100.00%		E1BRM4              	100.00%
Bootstrap support for F6X5V4 as seed ortholog is 100%.
Bootstrap support for E1BRM4 as seed ortholog is 100%.

Group of orthologs #3250. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:188

F6QZ03              	100.00%		F1NE55              	100.00%
Bootstrap support for F6QZ03 as seed ortholog is 100%.
Bootstrap support for F1NE55 as seed ortholog is 100%.

Group of orthologs #3251. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:237

F6ZSB0              	100.00%		E1C516              	100.00%
Bootstrap support for F6ZSB0 as seed ortholog is 100%.
Bootstrap support for E1C516 as seed ortholog is 100%.

Group of orthologs #3252. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:237

F7ASZ2              	100.00%		E1C230              	100.00%
Bootstrap support for F7ASZ2 as seed ortholog is 100%.
Bootstrap support for E1C230 as seed ortholog is 100%.

Group of orthologs #3253. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:89

F6PZV6              	100.00%		H9KYV4              	100.00%
Bootstrap support for F6PZV6 as seed ortholog is 100%.
Bootstrap support for H9KYV4 as seed ortholog is 98%.

Group of orthologs #3254. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 G.gallus:71

H2XNU9              	100.00%		E1C1U1              	100.00%
Bootstrap support for H2XNU9 as seed ortholog is 84%.
Bootstrap support for E1C1U1 as seed ortholog is 99%.

Group of orthologs #3255. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 G.gallus:36

F6WJT4              	100.00%		F1NRX9              	100.00%
Bootstrap support for F6WJT4 as seed ortholog is 95%.
Bootstrap support for F1NRX9 as seed ortholog is 80%.

Group of orthologs #3256. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:115

F6Q7P2              	100.00%		Q5F4B1              	100.00%
Bootstrap support for F6Q7P2 as seed ortholog is 100%.
Bootstrap support for Q5F4B1 as seed ortholog is 99%.

Group of orthologs #3257. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:237

F6Z010              	100.00%		F1NTP8              	100.00%
Bootstrap support for F6Z010 as seed ortholog is 100%.
Bootstrap support for F1NTP8 as seed ortholog is 100%.

Group of orthologs #3258. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:184

F6YI57              	100.00%		Q5ZLF0              	100.00%
Bootstrap support for F6YI57 as seed ortholog is 100%.
Bootstrap support for Q5ZLF0 as seed ortholog is 100%.

Group of orthologs #3259. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 G.gallus:237

H2Y0N2              	100.00%		Q5ZL54              	100.00%
Bootstrap support for H2Y0N2 as seed ortholog is 100%.
Bootstrap support for Q5ZL54 as seed ortholog is 100%.

Group of orthologs #3260. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 G.gallus:236

H2XPA7              	100.00%		E1C643              	100.00%
                    	       		E1C1T2              	49.48%
Bootstrap support for H2XPA7 as seed ortholog is 100%.
Bootstrap support for E1C643 as seed ortholog is 100%.

Group of orthologs #3261. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 G.gallus:236

F6PZ15              	100.00%		E1C6H4              	100.00%
Bootstrap support for F6PZ15 as seed ortholog is 100%.
Bootstrap support for E1C6H4 as seed ortholog is 100%.

Group of orthologs #3262. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 G.gallus:236

F6YBL5              	100.00%		E1C2L5              	100.00%
Bootstrap support for F6YBL5 as seed ortholog is 100%.
Bootstrap support for E1C2L5 as seed ortholog is 100%.

Group of orthologs #3263. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 G.gallus:236

F6TNT4              	100.00%		F1NWE6              	100.00%
Bootstrap support for F6TNT4 as seed ortholog is 99%.
Bootstrap support for F1NWE6 as seed ortholog is 100%.

Group of orthologs #3264. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 G.gallus:236

F7BMD5              	100.00%		F1NEI4              	100.00%
Bootstrap support for F7BMD5 as seed ortholog is 100%.
Bootstrap support for F1NEI4 as seed ortholog is 100%.

Group of orthologs #3265. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 G.gallus:236

F6Z6P7              	100.00%		P19204              	100.00%
Bootstrap support for F6Z6P7 as seed ortholog is 100%.
Bootstrap support for P19204 as seed ortholog is 100%.

Group of orthologs #3266. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 G.gallus:236

Q8HIN2              	100.00%		P18936              	100.00%
Bootstrap support for Q8HIN2 as seed ortholog is 100%.
Bootstrap support for P18936 as seed ortholog is 100%.

Group of orthologs #3267. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 G.gallus:98

F6S566              	100.00%		F1NSU4              	100.00%
                    	       		F1NQJ8              	14.84%
                    	       		F1NFK7              	5.25%
                    	       		F1NFK6              	5.02%
Bootstrap support for F6S566 as seed ortholog is 99%.
Bootstrap support for F1NSU4 as seed ortholog is 99%.

Group of orthologs #3268. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 G.gallus:82

F6V8I4              	100.00%		E1C338              	100.00%
                    	       		E1BY23              	44.07%
                    	       		E1BVQ2              	19.07%
Bootstrap support for F6V8I4 as seed ortholog is 99%.
Bootstrap support for E1C338 as seed ortholog is 99%.

Group of orthologs #3269. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 G.gallus:19

F6ZMB2              	100.00%		E1BUY3              	100.00%
                    	       		E1BUY4              	18.17%
Bootstrap support for F6ZMB2 as seed ortholog is 98%.
Bootstrap support for E1BUY3 as seed ortholog is 76%.

Group of orthologs #3270. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 G.gallus:235

F7AT36              	100.00%		E1BWS2              	100.00%
                    	       		H9L2H4              	34.96%
Bootstrap support for F7AT36 as seed ortholog is 100%.
Bootstrap support for E1BWS2 as seed ortholog is 100%.

Group of orthologs #3271. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 G.gallus:127

F7A3S4              	100.00%		F1NJ61              	100.00%
F6YQI1              	49.10%		
Bootstrap support for F7A3S4 as seed ortholog is 100%.
Bootstrap support for F1NJ61 as seed ortholog is 99%.

Group of orthologs #3272. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 G.gallus:17

F6UUI1              	100.00%		F1NHS7              	100.00%
Bootstrap support for F6UUI1 as seed ortholog is 100%.
Bootstrap support for F1NHS7 as seed ortholog is 85%.

Group of orthologs #3273. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 G.gallus:235

F6SK91              	100.00%		F1NVI0              	100.00%
Bootstrap support for F6SK91 as seed ortholog is 100%.
Bootstrap support for F1NVI0 as seed ortholog is 100%.

Group of orthologs #3274. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 G.gallus:169

F6XWK4              	100.00%		F1NL88              	100.00%
Bootstrap support for F6XWK4 as seed ortholog is 100%.
Bootstrap support for F1NL88 as seed ortholog is 100%.

Group of orthologs #3275. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 G.gallus:235

H2XR59              	100.00%		E1C2F5              	100.00%
Bootstrap support for H2XR59 as seed ortholog is 100%.
Bootstrap support for E1C2F5 as seed ortholog is 100%.

Group of orthologs #3276. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 G.gallus:235

F6ZN60              	100.00%		F1NI52              	100.00%
Bootstrap support for F6ZN60 as seed ortholog is 100%.
Bootstrap support for F1NI52 as seed ortholog is 100%.

Group of orthologs #3277. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 G.gallus:235

F6UUF9              	100.00%		F1P212              	100.00%
Bootstrap support for F6UUF9 as seed ortholog is 100%.
Bootstrap support for F1P212 as seed ortholog is 100%.

Group of orthologs #3278. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 G.gallus:235

H2XWR8              	100.00%		F1NS39              	100.00%
Bootstrap support for H2XWR8 as seed ortholog is 100%.
Bootstrap support for F1NS39 as seed ortholog is 100%.

Group of orthologs #3279. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 G.gallus:66

F6Q4W5              	100.00%		P11602              	100.00%
                    	       		F1NFW7              	26.71%
                    	       		F1NZI8              	24.52%
Bootstrap support for F6Q4W5 as seed ortholog is 94%.
Bootstrap support for P11602 as seed ortholog is 90%.

Group of orthologs #3280. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:130

F6XU21              	100.00%		F1NSJ9              	100.00%
                    	       		E1BVI9              	46.05%
                    	       		A4ZZA2              	42.54%
Bootstrap support for F6XU21 as seed ortholog is 99%.
Bootstrap support for F1NSJ9 as seed ortholog is 99%.

Group of orthologs #3281. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 G.gallus:111

F6Y7X3              	100.00%		O13076              	100.00%
                    	       		P49892              	11.75%
                    	       		F1NSB8              	5.76%
Bootstrap support for F6Y7X3 as seed ortholog is 85%.
Bootstrap support for O13076 as seed ortholog is 99%.

Group of orthologs #3282. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 G.gallus:167

F7AKT1              	100.00%		F1NGG2              	100.00%
                    	       		F1NTE6              	40.82%
Bootstrap support for F7AKT1 as seed ortholog is 100%.
Bootstrap support for F1NGG2 as seed ortholog is 100%.

Group of orthologs #3283. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 G.gallus:234

F6ZRL9              	100.00%		Q5ZM14              	100.00%
                    	       		F1NQR2              	14.77%
Bootstrap support for F6ZRL9 as seed ortholog is 99%.
Bootstrap support for Q5ZM14 as seed ortholog is 100%.

Group of orthologs #3284. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 G.gallus:234

F6RF58              	100.00%		F1NE52              	100.00%
Bootstrap support for F6RF58 as seed ortholog is 100%.
Bootstrap support for F1NE52 as seed ortholog is 100%.

Group of orthologs #3285. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 G.gallus:126

F6U1Q3              	100.00%		F1NED0              	100.00%
Bootstrap support for F6U1Q3 as seed ortholog is 100%.
Bootstrap support for F1NED0 as seed ortholog is 100%.

Group of orthologs #3286. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 G.gallus:234

F6WUB5              	100.00%		E1C8U1              	100.00%
Bootstrap support for F6WUB5 as seed ortholog is 100%.
Bootstrap support for E1C8U1 as seed ortholog is 100%.

Group of orthologs #3287. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 G.gallus:23

F7ALU8              	100.00%		E1C250              	100.00%
Bootstrap support for F7ALU8 as seed ortholog is 100%.
Bootstrap support for E1C250 as seed ortholog is 69%.
Alternative seed ortholog is E1BVV2 (23 bits away from this cluster)

Group of orthologs #3288. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 G.gallus:234

F6XG50              	100.00%		F1NGJ1              	100.00%
Bootstrap support for F6XG50 as seed ortholog is 100%.
Bootstrap support for F1NGJ1 as seed ortholog is 100%.

Group of orthologs #3289. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 G.gallus:182

H2XJN3              	100.00%		F1NBN9              	100.00%
Bootstrap support for H2XJN3 as seed ortholog is 100%.
Bootstrap support for F1NBN9 as seed ortholog is 100%.

Group of orthologs #3290. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 G.gallus:46

H2Y054              	100.00%		E1C0Q9              	100.00%
Bootstrap support for H2Y054 as seed ortholog is 99%.
Bootstrap support for E1C0Q9 as seed ortholog is 95%.

Group of orthologs #3291. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 G.gallus:234

H2XNT5              	100.00%		F1NH14              	100.00%
Bootstrap support for H2XNT5 as seed ortholog is 100%.
Bootstrap support for F1NH14 as seed ortholog is 100%.

Group of orthologs #3292. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 G.gallus:233

F6YX42              	100.00%		F1NFI7              	100.00%
F6WHG5              	16.19%		Q9YGI5              	26.72%
Bootstrap support for F6YX42 as seed ortholog is 100%.
Bootstrap support for F1NFI7 as seed ortholog is 100%.

Group of orthologs #3293. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 G.gallus:233

Q70W02              	100.00%		P48434              	100.00%
                    	       		Q9W757              	30.80%
                    	       		P57074              	27.18%
Bootstrap support for Q70W02 as seed ortholog is 100%.
Bootstrap support for P48434 as seed ortholog is 100%.

Group of orthologs #3294. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 G.gallus:85

F6T9X3              	100.00%		F1NH51              	100.00%
                    	       		F1NSQ2              	19.57%
Bootstrap support for F6T9X3 as seed ortholog is 98%.
Bootstrap support for F1NH51 as seed ortholog is 91%.

Group of orthologs #3295. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 G.gallus:233

F6VDE1              	100.00%		F1NDF0              	100.00%
                    	       		F1P3G4              	19.63%
Bootstrap support for F6VDE1 as seed ortholog is 99%.
Bootstrap support for F1NDF0 as seed ortholog is 100%.

Group of orthologs #3296. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 G.gallus:85

F6X8W4              	100.00%		F1NGG4              	100.00%
                    	       		Q90812              	63.33%
Bootstrap support for F6X8W4 as seed ortholog is 100%.
Bootstrap support for F1NGG4 as seed ortholog is 97%.

Group of orthologs #3297. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 G.gallus:233

F6Z0V4              	100.00%		F1NGK0              	100.00%
                    	       		E1C3R1              	22.48%
Bootstrap support for F6Z0V4 as seed ortholog is 100%.
Bootstrap support for F1NGK0 as seed ortholog is 100%.

Group of orthologs #3298. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 G.gallus:233

F6ZUK5              	100.00%		P50478              	100.00%
                    	       		F1NZ04              	22.97%
Bootstrap support for F6ZUK5 as seed ortholog is 100%.
Bootstrap support for P50478 as seed ortholog is 100%.

Group of orthologs #3299. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 G.gallus:233

F6PJV8              	100.00%		F1NNF1              	100.00%
Bootstrap support for F6PJV8 as seed ortholog is 100%.
Bootstrap support for F1NNF1 as seed ortholog is 100%.

Group of orthologs #3300. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 G.gallus:153

H2XTM5              	100.00%		E1BVK2              	100.00%
Bootstrap support for H2XTM5 as seed ortholog is 100%.
Bootstrap support for E1BVK2 as seed ortholog is 100%.

Group of orthologs #3301. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 G.gallus:233

F6TMT5              	100.00%		F1P0G0              	100.00%
Bootstrap support for F6TMT5 as seed ortholog is 99%.
Bootstrap support for F1P0G0 as seed ortholog is 100%.

Group of orthologs #3302. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 G.gallus:81

F6WML9              	100.00%		F1NS71              	100.00%
Bootstrap support for F6WML9 as seed ortholog is 100%.
Bootstrap support for F1NS71 as seed ortholog is 99%.

Group of orthologs #3303. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 G.gallus:47

F6WLK6              	100.00%		F1P218              	100.00%
Bootstrap support for F6WLK6 as seed ortholog is 100%.
Bootstrap support for F1P218 as seed ortholog is 93%.

Group of orthologs #3304. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 G.gallus:232

F6VIZ2              	100.00%		E1C5C0              	100.00%
                    	       		Q9W6U8              	37.45%
                    	       		H9L0K8              	19.22%
Bootstrap support for F6VIZ2 as seed ortholog is 100%.
Bootstrap support for E1C5C0 as seed ortholog is 100%.

Group of orthologs #3305. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 G.gallus:232

F6Z235              	100.00%		F1NNZ2              	100.00%
                    	       		P47832              	23.23%
Bootstrap support for F6Z235 as seed ortholog is 100%.
Bootstrap support for F1NNZ2 as seed ortholog is 100%.

Group of orthologs #3306. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 G.gallus:168

H2Y2N8              	100.00%		F1NB27              	100.00%
                    	       		F1P357              	8.70%
Bootstrap support for H2Y2N8 as seed ortholog is 93%.
Bootstrap support for F1NB27 as seed ortholog is 99%.

Group of orthologs #3307. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 G.gallus:51

F6WP72              	100.00%		Q9IAK4              	100.00%
                    	       		E1BUB7              	57.01%
Bootstrap support for F6WP72 as seed ortholog is 100%.
Bootstrap support for Q9IAK4 as seed ortholog is 94%.

Group of orthologs #3308. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 G.gallus:232

Q4H342              	100.00%		F1NC42              	100.00%
                    	       		Q90788              	100.00%
Bootstrap support for Q4H342 as seed ortholog is 100%.
Bootstrap support for F1NC42 as seed ortholog is 100%.
Bootstrap support for Q90788 as seed ortholog is 100%.

Group of orthologs #3309. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 G.gallus:232

F6VHM6              	100.00%		E1C0Z8              	100.00%
Bootstrap support for F6VHM6 as seed ortholog is 100%.
Bootstrap support for E1C0Z8 as seed ortholog is 100%.

Group of orthologs #3310. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 G.gallus:232

F6TZC4              	100.00%		F1NMF2              	100.00%
Bootstrap support for F6TZC4 as seed ortholog is 100%.
Bootstrap support for F1NMF2 as seed ortholog is 100%.

Group of orthologs #3311. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 G.gallus:232

F7B3P4              	100.00%		F1N9B7              	100.00%
Bootstrap support for F7B3P4 as seed ortholog is 100%.
Bootstrap support for F1N9B7 as seed ortholog is 100%.

Group of orthologs #3312. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 G.gallus:232

F6XJ18              	100.00%		Q5ZIP6              	100.00%
Bootstrap support for F6XJ18 as seed ortholog is 100%.
Bootstrap support for Q5ZIP6 as seed ortholog is 100%.

Group of orthologs #3313. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 G.gallus:141

F7AI19              	100.00%		Q5F4C4              	100.00%
Bootstrap support for F7AI19 as seed ortholog is 88%.
Bootstrap support for Q5F4C4 as seed ortholog is 99%.

Group of orthologs #3314. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 G.gallus:232

H2XTR2              	100.00%		F1P3R7              	100.00%
Bootstrap support for H2XTR2 as seed ortholog is 100%.
Bootstrap support for F1P3R7 as seed ortholog is 100%.

Group of orthologs #3315. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:125

H2XRG0              	100.00%		Q5ZII8              	100.00%
Bootstrap support for H2XRG0 as seed ortholog is 99%.
Bootstrap support for Q5ZII8 as seed ortholog is 99%.

Group of orthologs #3316. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 G.gallus:231

F6RMW3              	100.00%		F1P2Y2              	100.00%
                    	       		F1NYZ7              	64.83%
                    	       		E1C136              	45.34%
                    	       		F1NHE3              	41.95%
Bootstrap support for F6RMW3 as seed ortholog is 100%.
Bootstrap support for F1P2Y2 as seed ortholog is 100%.

Group of orthologs #3317. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 G.gallus:231

F6U952              	100.00%		E1BZF7              	100.00%
Bootstrap support for F6U952 as seed ortholog is 100%.
Bootstrap support for E1BZF7 as seed ortholog is 100%.

Group of orthologs #3318. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 G.gallus:231

F6WFE5              	100.00%		E1C7Q1              	100.00%
Bootstrap support for F6WFE5 as seed ortholog is 100%.
Bootstrap support for E1C7Q1 as seed ortholog is 100%.

Group of orthologs #3319. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 G.gallus:231

H2XX74              	100.00%		E1BZZ4              	100.00%
Bootstrap support for H2XX74 as seed ortholog is 100%.
Bootstrap support for E1BZZ4 as seed ortholog is 100%.

Group of orthologs #3320. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 G.gallus:231

F7B349              	100.00%		F1NWG7              	100.00%
Bootstrap support for F7B349 as seed ortholog is 100%.
Bootstrap support for F1NWG7 as seed ortholog is 100%.

Group of orthologs #3321. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 G.gallus:74

H2XJL7              	100.00%		Q5ZIB0              	100.00%
Bootstrap support for H2XJL7 as seed ortholog is 100%.
Bootstrap support for Q5ZIB0 as seed ortholog is 99%.

Group of orthologs #3322. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 G.gallus:231

H2Y197              	100.00%		F1NZ80              	100.00%
Bootstrap support for H2Y197 as seed ortholog is 100%.
Bootstrap support for F1NZ80 as seed ortholog is 100%.

Group of orthologs #3323. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:98

F6T5H3              	100.00%		E1C2D6              	29.15%
Q4H389              	100.00%		P53413              	100.00%
                    	       		H9L043              	27.30%
Bootstrap support for F6T5H3 as seed ortholog is 100%.
Bootstrap support for Q4H389 as seed ortholog is 100%.
Bootstrap support for P53413 as seed ortholog is 97%.

Group of orthologs #3324. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:136

Q4H2Y1              	100.00%		O93385              	100.00%
                    	       		F1NTC1              	60.76%
                    	       		E1C143              	44.39%
                    	       		P56673              	33.18%
Bootstrap support for Q4H2Y1 as seed ortholog is 100%.
Bootstrap support for O93385 as seed ortholog is 100%.

Group of orthologs #3325. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:230

F6W804              	100.00%		Q5F3X0              	100.00%
F6Q9F4              	6.63%		
Bootstrap support for F6W804 as seed ortholog is 100%.
Bootstrap support for Q5F3X0 as seed ortholog is 100%.

Group of orthologs #3326. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:230

F6VMC6              	100.00%		E1BVP4              	100.00%
Bootstrap support for F6VMC6 as seed ortholog is 100%.
Bootstrap support for E1BVP4 as seed ortholog is 100%.

Group of orthologs #3327. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:230

F6RED0              	100.00%		F1NEN7              	100.00%
Bootstrap support for F6RED0 as seed ortholog is 100%.
Bootstrap support for F1NEN7 as seed ortholog is 100%.

Group of orthologs #3328. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:230

F6Q548              	100.00%		F1NJV0              	100.00%
Bootstrap support for F6Q548 as seed ortholog is 100%.
Bootstrap support for F1NJV0 as seed ortholog is 100%.

Group of orthologs #3329. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:230

F6X4K3              	100.00%		E1C489              	100.00%
Bootstrap support for F6X4K3 as seed ortholog is 100%.
Bootstrap support for E1C489 as seed ortholog is 100%.

Group of orthologs #3330. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:230

F6V1A9              	100.00%		F1NF63              	100.00%
Bootstrap support for F6V1A9 as seed ortholog is 100%.
Bootstrap support for F1NF63 as seed ortholog is 100%.

Group of orthologs #3331. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:230

F6QDJ6              	100.00%		H9L111              	100.00%
Bootstrap support for F6QDJ6 as seed ortholog is 100%.
Bootstrap support for H9L111 as seed ortholog is 100%.

Group of orthologs #3332. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:230

F6RXW9              	100.00%		F1P5K5              	100.00%
Bootstrap support for F6RXW9 as seed ortholog is 100%.
Bootstrap support for F1P5K5 as seed ortholog is 100%.

Group of orthologs #3333. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:230

F6PXX9              	100.00%		O13035              	100.00%
Bootstrap support for F6PXX9 as seed ortholog is 100%.
Bootstrap support for O13035 as seed ortholog is 100%.

Group of orthologs #3334. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:230

F7AYB2              	100.00%		F1NIP2              	100.00%
Bootstrap support for F7AYB2 as seed ortholog is 100%.
Bootstrap support for F1NIP2 as seed ortholog is 100%.

Group of orthologs #3335. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:230

H2XK36              	100.00%		Q5XXA9              	100.00%
Bootstrap support for H2XK36 as seed ortholog is 100%.
Bootstrap support for Q5XXA9 as seed ortholog is 100%.

Group of orthologs #3336. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 G.gallus:230

H2XTW6              	100.00%		Q5ZKD4              	100.00%
Bootstrap support for H2XTW6 as seed ortholog is 100%.
Bootstrap support for Q5ZKD4 as seed ortholog is 100%.

Group of orthologs #3337. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 G.gallus:229

F6SP08              	100.00%		F1NW07              	100.00%
                    	       		Q5ZIX4              	47.50%
Bootstrap support for F6SP08 as seed ortholog is 100%.
Bootstrap support for F1NW07 as seed ortholog is 100%.

Group of orthologs #3338. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 G.gallus:229

F6QKB5              	100.00%		E1C4F1              	100.00%
Bootstrap support for F6QKB5 as seed ortholog is 100%.
Bootstrap support for E1C4F1 as seed ortholog is 100%.

Group of orthologs #3339. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 G.gallus:229

F6T6F5              	100.00%		E1C8Y3              	100.00%
Bootstrap support for F6T6F5 as seed ortholog is 100%.
Bootstrap support for E1C8Y3 as seed ortholog is 100%.

Group of orthologs #3340. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 G.gallus:229

F6QBK7              	100.00%		F1P0B5              	100.00%
Bootstrap support for F6QBK7 as seed ortholog is 100%.
Bootstrap support for F1P0B5 as seed ortholog is 100%.

Group of orthologs #3341. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 G.gallus:229

F6UGW6              	100.00%		F1NQU2              	100.00%
Bootstrap support for F6UGW6 as seed ortholog is 100%.
Bootstrap support for F1NQU2 as seed ortholog is 100%.

Group of orthologs #3342. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 G.gallus:229

F7B3M4              	100.00%		E1C5X9              	100.00%
Bootstrap support for F7B3M4 as seed ortholog is 100%.
Bootstrap support for E1C5X9 as seed ortholog is 100%.

Group of orthologs #3343. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 G.gallus:229

F6SXZ3              	100.00%		F1P0L3              	100.00%
Bootstrap support for F6SXZ3 as seed ortholog is 100%.
Bootstrap support for F1P0L3 as seed ortholog is 100%.

Group of orthologs #3344. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 G.gallus:229

H2XX55              	100.00%		F1NY62              	100.00%
Bootstrap support for H2XX55 as seed ortholog is 100%.
Bootstrap support for F1NY62 as seed ortholog is 100%.

Group of orthologs #3345. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 G.gallus:228

F6ZJ18              	100.00%		F1P027              	100.00%
                    	       		F1NAU1              	60.10%
                    	       		P50593              	35.77%
Bootstrap support for F6ZJ18 as seed ortholog is 100%.
Bootstrap support for F1P027 as seed ortholog is 100%.

Group of orthologs #3346. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 G.gallus:228

F7BAJ6              	100.00%		E1C341              	100.00%
                    	       		E1C5Q1              	12.71%
Bootstrap support for F7BAJ6 as seed ortholog is 100%.
Bootstrap support for E1C341 as seed ortholog is 100%.

Group of orthologs #3347. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 G.gallus:228

F6VQB3              	100.00%		E1BQV4              	100.00%
Bootstrap support for F6VQB3 as seed ortholog is 100%.
Bootstrap support for E1BQV4 as seed ortholog is 100%.

Group of orthologs #3348. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 G.gallus:176

F6V2G1              	100.00%		E1BVR0              	100.00%
Bootstrap support for F6V2G1 as seed ortholog is 99%.
Bootstrap support for E1BVR0 as seed ortholog is 99%.

Group of orthologs #3349. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 G.gallus:173

F6TSM0              	100.00%		F1NU19              	100.00%
Bootstrap support for F6TSM0 as seed ortholog is 99%.
Bootstrap support for F1NU19 as seed ortholog is 99%.

Group of orthologs #3350. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 G.gallus:228

F6SSS9              	100.00%		F1NZX3              	100.00%
Bootstrap support for F6SSS9 as seed ortholog is 100%.
Bootstrap support for F1NZX3 as seed ortholog is 100%.

Group of orthologs #3351. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 G.gallus:228

F7B8Z8              	100.00%		F1NFX0              	100.00%
Bootstrap support for F7B8Z8 as seed ortholog is 100%.
Bootstrap support for F1NFX0 as seed ortholog is 100%.

Group of orthologs #3352. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 G.gallus:35

F7BAU4              	100.00%		F1NJ67              	100.00%
Bootstrap support for F7BAU4 as seed ortholog is 95%.
Bootstrap support for F1NJ67 as seed ortholog is 83%.

Group of orthologs #3353. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 G.gallus:228

F6WTN6              	100.00%		Q5ZIK5              	100.00%
Bootstrap support for F6WTN6 as seed ortholog is 100%.
Bootstrap support for Q5ZIK5 as seed ortholog is 100%.

Group of orthologs #3354. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 G.gallus:227

F6S7L1              	100.00%		E1BT90              	100.00%
                    	       		E1C4E7              	32.15%
Bootstrap support for F6S7L1 as seed ortholog is 100%.
Bootstrap support for E1BT90 as seed ortholog is 100%.

Group of orthologs #3355. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 G.gallus:227

F6X5W4              	100.00%		E1BTK1              	100.00%
Bootstrap support for F6X5W4 as seed ortholog is 100%.
Bootstrap support for E1BTK1 as seed ortholog is 100%.

Group of orthologs #3356. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 G.gallus:227

F6VY63              	100.00%		E1C0T1              	100.00%
Bootstrap support for F6VY63 as seed ortholog is 100%.
Bootstrap support for E1C0T1 as seed ortholog is 100%.

Group of orthologs #3357. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 G.gallus:227

F6PHN6              	100.00%		F1NSA5              	100.00%
Bootstrap support for F6PHN6 as seed ortholog is 100%.
Bootstrap support for F1NSA5 as seed ortholog is 100%.

Group of orthologs #3358. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 G.gallus:227

F6YUZ1              	100.00%		E1C3K7              	100.00%
Bootstrap support for F6YUZ1 as seed ortholog is 100%.
Bootstrap support for E1C3K7 as seed ortholog is 100%.

Group of orthologs #3359. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 G.gallus:227

F6ZS91              	100.00%		E1C5N7              	100.00%
Bootstrap support for F6ZS91 as seed ortholog is 100%.
Bootstrap support for E1C5N7 as seed ortholog is 100%.

Group of orthologs #3360. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 G.gallus:227

F6ZG04              	100.00%		F1N8A7              	100.00%
Bootstrap support for F6ZG04 as seed ortholog is 100%.
Bootstrap support for F1N8A7 as seed ortholog is 100%.

Group of orthologs #3361. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 G.gallus:227

F6UHS2              	100.00%		Q5ZKE7              	100.00%
Bootstrap support for F6UHS2 as seed ortholog is 100%.
Bootstrap support for Q5ZKE7 as seed ortholog is 100%.

Group of orthologs #3362. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 G.gallus:118

H2XQ72              	100.00%		F1NJ88              	100.00%
Bootstrap support for H2XQ72 as seed ortholog is 100%.
Bootstrap support for F1NJ88 as seed ortholog is 99%.

Group of orthologs #3363. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 G.gallus:227

F6VKW3              	100.00%		Q5ZKG8              	100.00%
Bootstrap support for F6VKW3 as seed ortholog is 100%.
Bootstrap support for Q5ZKG8 as seed ortholog is 100%.

Group of orthologs #3364. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 G.gallus:226

F6T569              	100.00%		E1BTA0              	100.00%
F6YD46              	56.74%		
F6WGU2              	40.93%		
Bootstrap support for F6T569 as seed ortholog is 100%.
Bootstrap support for E1BTA0 as seed ortholog is 100%.

Group of orthologs #3365. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 G.gallus:226

F6ZP94              	100.00%		E1BVP5              	100.00%
F7BBL3              	73.27%		
H2Y3S1              	31.19%		
Bootstrap support for F6ZP94 as seed ortholog is 100%.
Bootstrap support for E1BVP5 as seed ortholog is 100%.

Group of orthologs #3366. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 G.gallus:174

F6TCF8              	100.00%		E1BSV7              	100.00%
Bootstrap support for F6TCF8 as seed ortholog is 100%.
Bootstrap support for E1BSV7 as seed ortholog is 100%.

Group of orthologs #3367. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 G.gallus:226

F7ALA2              	100.00%		E1C370              	100.00%
Bootstrap support for F7ALA2 as seed ortholog is 100%.
Bootstrap support for E1C370 as seed ortholog is 100%.

Group of orthologs #3368. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 G.gallus:226

F7B8N2              	100.00%		E1C5C4              	100.00%
Bootstrap support for F7B8N2 as seed ortholog is 100%.
Bootstrap support for E1C5C4 as seed ortholog is 100%.

Group of orthologs #3369. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 G.gallus:226

F6Q9P1              	100.00%		Q5F4A8              	100.00%
Bootstrap support for F6Q9P1 as seed ortholog is 100%.
Bootstrap support for Q5F4A8 as seed ortholog is 100%.

Group of orthologs #3370. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 G.gallus:88

F6VJJ2              	100.00%		F1P0L7              	100.00%
Bootstrap support for F6VJJ2 as seed ortholog is 50%.
Alternative seed ortholog is F6ULW5 (3 bits away from this cluster)
Bootstrap support for F1P0L7 as seed ortholog is 98%.

Group of orthologs #3371. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 G.gallus:225

F6RNX9              	100.00%		F1NNI4              	100.00%
                    	       		Q5ZKI6              	46.60%
Bootstrap support for F6RNX9 as seed ortholog is 100%.
Bootstrap support for F1NNI4 as seed ortholog is 100%.

Group of orthologs #3372. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 G.gallus:225

H2XX58              	100.00%		E1C7N0              	100.00%
                    	       		E1C0X4              	16.07%
Bootstrap support for H2XX58 as seed ortholog is 100%.
Bootstrap support for E1C7N0 as seed ortholog is 100%.

Group of orthologs #3373. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 G.gallus:225

F6S2C6              	100.00%		E1BS06              	100.00%
Bootstrap support for F6S2C6 as seed ortholog is 100%.
Bootstrap support for E1BS06 as seed ortholog is 100%.

Group of orthologs #3374. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 G.gallus:225

F6XIG6              	100.00%		F1P2S1              	100.00%
Bootstrap support for F6XIG6 as seed ortholog is 100%.
Bootstrap support for F1P2S1 as seed ortholog is 100%.

Group of orthologs #3375. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 G.gallus:110

H2Y3C0              	100.00%		H9L130              	100.00%
Bootstrap support for H2Y3C0 as seed ortholog is 100%.
Bootstrap support for H9L130 as seed ortholog is 100%.

Group of orthologs #3376. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 G.gallus:224

F6UIM4              	100.00%		F1P1E3              	100.00%
                    	       		F1NWL1              	6.57%
Bootstrap support for F6UIM4 as seed ortholog is 100%.
Bootstrap support for F1P1E3 as seed ortholog is 100%.

Group of orthologs #3377. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 G.gallus:224

F6YP38              	100.00%		Q5ZJR3              	100.00%
                    	       		G1K327              	11.69%
Bootstrap support for F6YP38 as seed ortholog is 100%.
Bootstrap support for Q5ZJR3 as seed ortholog is 100%.

Group of orthologs #3378. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 G.gallus:224

F6S0S0              	100.00%		F1NDI6              	100.00%
Bootstrap support for F6S0S0 as seed ortholog is 100%.
Bootstrap support for F1NDI6 as seed ortholog is 100%.

Group of orthologs #3379. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 G.gallus:224

H2XL81              	100.00%		E1BS68              	100.00%
Bootstrap support for H2XL81 as seed ortholog is 100%.
Bootstrap support for E1BS68 as seed ortholog is 100%.

Group of orthologs #3380. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 G.gallus:224

F6ZIF8              	100.00%		F1P0P8              	100.00%
Bootstrap support for F6ZIF8 as seed ortholog is 100%.
Bootstrap support for F1P0P8 as seed ortholog is 100%.

Group of orthologs #3381. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 G.gallus:224

H2XRN7              	100.00%		F1NV20              	100.00%
Bootstrap support for H2XRN7 as seed ortholog is 100%.
Bootstrap support for F1NV20 as seed ortholog is 100%.

Group of orthologs #3382. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 G.gallus:223

F6QNA6              	100.00%		E1C0H4              	100.00%
Bootstrap support for F6QNA6 as seed ortholog is 100%.
Bootstrap support for E1C0H4 as seed ortholog is 100%.

Group of orthologs #3383. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 G.gallus:155

F6VYL7              	100.00%		E1C337              	100.00%
Bootstrap support for F6VYL7 as seed ortholog is 100%.
Bootstrap support for E1C337 as seed ortholog is 99%.

Group of orthologs #3384. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 G.gallus:223

F6SNK4              	100.00%		F1NDS2              	100.00%
Bootstrap support for F6SNK4 as seed ortholog is 100%.
Bootstrap support for F1NDS2 as seed ortholog is 100%.

Group of orthologs #3385. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 G.gallus:167

F6VUS5              	100.00%		F1NG69              	100.00%
Bootstrap support for F6VUS5 as seed ortholog is 99%.
Bootstrap support for F1NG69 as seed ortholog is 100%.

Group of orthologs #3386. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 G.gallus:95

H2XKK7              	100.00%		E1C184              	100.00%
Bootstrap support for H2XKK7 as seed ortholog is 100%.
Bootstrap support for E1C184 as seed ortholog is 99%.

Group of orthologs #3387. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 G.gallus:223

F7AEK6              	100.00%		E1C7A6              	100.00%
Bootstrap support for F7AEK6 as seed ortholog is 100%.
Bootstrap support for E1C7A6 as seed ortholog is 100%.

Group of orthologs #3388. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 G.gallus:223

H2XNP3              	100.00%		F1N882              	100.00%
Bootstrap support for H2XNP3 as seed ortholog is 100%.
Bootstrap support for F1N882 as seed ortholog is 100%.

Group of orthologs #3389. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 G.gallus:159

H2XLX1              	100.00%		F1P582              	100.00%
Bootstrap support for H2XLX1 as seed ortholog is 100%.
Bootstrap support for F1P582 as seed ortholog is 99%.

Group of orthologs #3390. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 G.gallus:223

H2XJI9              	100.00%		Q5ZM96              	100.00%
Bootstrap support for H2XJI9 as seed ortholog is 100%.
Bootstrap support for Q5ZM96 as seed ortholog is 100%.

Group of orthologs #3391. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 G.gallus:223

H2XLX9              	100.00%		Q5ZL21              	100.00%
Bootstrap support for H2XLX9 as seed ortholog is 100%.
Bootstrap support for Q5ZL21 as seed ortholog is 100%.

Group of orthologs #3392. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 G.gallus:222

F6WHM9              	100.00%		E1C8A4              	100.00%
                    	       		F1NRW1              	16.93%
Bootstrap support for F6WHM9 as seed ortholog is 99%.
Bootstrap support for E1C8A4 as seed ortholog is 100%.

Group of orthologs #3393. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 G.gallus:222

F6UF94              	100.00%		E1BTK3              	100.00%
Bootstrap support for F6UF94 as seed ortholog is 100%.
Bootstrap support for E1BTK3 as seed ortholog is 100%.

Group of orthologs #3394. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 G.gallus:222

F6QM57              	100.00%		F1NGV9              	100.00%
Bootstrap support for F6QM57 as seed ortholog is 100%.
Bootstrap support for F1NGV9 as seed ortholog is 100%.

Group of orthologs #3395. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 G.gallus:222

H2XPR5              	100.00%		E1BRV8              	100.00%
Bootstrap support for H2XPR5 as seed ortholog is 100%.
Bootstrap support for E1BRV8 as seed ortholog is 100%.

Group of orthologs #3396. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 G.gallus:27

F6UWQ4              	100.00%		F1NSM9              	100.00%
Bootstrap support for F6UWQ4 as seed ortholog is 97%.
Bootstrap support for F1NSM9 as seed ortholog is 75%.

Group of orthologs #3397. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 G.gallus:222

F7AHQ4              	100.00%		E1C9D8              	100.00%
Bootstrap support for F7AHQ4 as seed ortholog is 100%.
Bootstrap support for E1C9D8 as seed ortholog is 100%.

Group of orthologs #3398. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 G.gallus:222

F6RD37              	100.00%		F1P5N8              	100.00%
Bootstrap support for F6RD37 as seed ortholog is 100%.
Bootstrap support for F1P5N8 as seed ortholog is 100%.

Group of orthologs #3399. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 G.gallus:222

F6XS17              	100.00%		F1NUW6              	100.00%
Bootstrap support for F6XS17 as seed ortholog is 100%.
Bootstrap support for F1NUW6 as seed ortholog is 100%.

Group of orthologs #3400. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 G.gallus:19

H2Y115              	100.00%		E1BUN3              	100.00%
Bootstrap support for H2Y115 as seed ortholog is 81%.
Bootstrap support for E1BUN3 as seed ortholog is 81%.

Group of orthologs #3401. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 G.gallus:222

F6VJL7              	100.00%		P61355              	100.00%
Bootstrap support for F6VJL7 as seed ortholog is 100%.
Bootstrap support for P61355 as seed ortholog is 100%.

Group of orthologs #3402. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 G.gallus:222

Q8I7E3              	100.00%		F1P010              	100.00%
Bootstrap support for Q8I7E3 as seed ortholog is 100%.
Bootstrap support for F1P010 as seed ortholog is 100%.

Group of orthologs #3403. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:221

F6U6A2              	100.00%		F1P5U1              	100.00%
                    	       		F1ND98              	28.93%
Bootstrap support for F6U6A2 as seed ortholog is 100%.
Bootstrap support for F1P5U1 as seed ortholog is 100%.

Group of orthologs #3404. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:221

F6T3M2              	100.00%		P36377              	100.00%
Bootstrap support for F6T3M2 as seed ortholog is 99%.
Bootstrap support for P36377 as seed ortholog is 100%.

Group of orthologs #3405. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 G.gallus:221

H2XT70              	100.00%		P04047              	100.00%
Bootstrap support for H2XT70 as seed ortholog is 100%.
Bootstrap support for P04047 as seed ortholog is 100%.

Group of orthologs #3406. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 G.gallus:65

H2XS07              	100.00%		F1NSR7              	100.00%
H2XXY1              	25.63%		F1NHR7              	6.67%
F6U667              	19.50%		
Bootstrap support for H2XS07 as seed ortholog is 76%.
Bootstrap support for F1NSR7 as seed ortholog is 97%.

Group of orthologs #3407. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 G.gallus:220

F7ATF3              	100.00%		F1NLY4              	100.00%
                    	       		H9KZM6              	100.00%
                    	       		F1NE36              	6.51%
Bootstrap support for F7ATF3 as seed ortholog is 100%.
Bootstrap support for F1NLY4 as seed ortholog is 100%.
Bootstrap support for H9KZM6 as seed ortholog is 100%.

Group of orthologs #3408. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 G.gallus:220

F6PW95              	100.00%		F1NKU4              	100.00%
                    	       		F1NWR1              	41.61%
Bootstrap support for F6PW95 as seed ortholog is 100%.
Bootstrap support for F1NKU4 as seed ortholog is 100%.

Group of orthologs #3409. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 G.gallus:220

F6VTD9              	100.00%		E1C694              	100.00%
F6SF06              	22.09%		
Bootstrap support for F6VTD9 as seed ortholog is 63%.
Alternative seed ortholog is F6YQB8 (15 bits away from this cluster)
Bootstrap support for E1C694 as seed ortholog is 100%.

Group of orthologs #3410. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 G.gallus:43

F6Z156              	100.00%		F1P1G4              	100.00%
                    	       		F1P278              	8.78%
Bootstrap support for F6Z156 as seed ortholog is 99%.
Bootstrap support for F1P1G4 as seed ortholog is 96%.

Group of orthologs #3411. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 G.gallus:220

F6RUV6              	100.00%		F1NAL8              	100.00%
Bootstrap support for F6RUV6 as seed ortholog is 100%.
Bootstrap support for F1NAL8 as seed ortholog is 100%.

Group of orthologs #3412. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 G.gallus:220

F6UTR1              	100.00%		E1C7S8              	100.00%
Bootstrap support for F6UTR1 as seed ortholog is 100%.
Bootstrap support for E1C7S8 as seed ortholog is 100%.

Group of orthologs #3413. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 G.gallus:220

F6Y7F7              	100.00%		E1C1H6              	100.00%
Bootstrap support for F6Y7F7 as seed ortholog is 100%.
Bootstrap support for E1C1H6 as seed ortholog is 100%.

Group of orthologs #3414. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 G.gallus:220

F6WQI3              	100.00%		F1NYZ1              	100.00%
Bootstrap support for F6WQI3 as seed ortholog is 100%.
Bootstrap support for F1NYZ1 as seed ortholog is 100%.

Group of orthologs #3415. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 G.gallus:220

F7A7N9              	100.00%		F1NR25              	100.00%
Bootstrap support for F7A7N9 as seed ortholog is 100%.
Bootstrap support for F1NR25 as seed ortholog is 100%.

Group of orthologs #3416. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 G.gallus:76

F6TA16              	100.00%		Q5ZJG8              	100.00%
Bootstrap support for F6TA16 as seed ortholog is 46%.
Alternative seed ortholog is F6YRX9 (2 bits away from this cluster)
Bootstrap support for Q5ZJG8 as seed ortholog is 99%.

Group of orthologs #3417. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:158

H2XVW6              	100.00%		F1NNB5              	100.00%
Bootstrap support for H2XVW6 as seed ortholog is 99%.
Bootstrap support for F1NNB5 as seed ortholog is 99%.

Group of orthologs #3418. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 G.gallus:220

H2XR04              	100.00%		Q5ZMV3              	100.00%
Bootstrap support for H2XR04 as seed ortholog is 100%.
Bootstrap support for Q5ZMV3 as seed ortholog is 100%.

Group of orthologs #3419. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 G.gallus:220

Q4H2Q4              	100.00%		H9KYW9              	100.00%
Bootstrap support for Q4H2Q4 as seed ortholog is 100%.
Bootstrap support for H9KYW9 as seed ortholog is 100%.

Group of orthologs #3420. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 G.gallus:24

F7BIM6              	100.00%		E1C0V6              	100.00%
                    	       		E1C311              	26.99%
                    	       		F1N8T2              	23.41%
Bootstrap support for F7BIM6 as seed ortholog is 82%.
Bootstrap support for E1C0V6 as seed ortholog is 61%.
Alternative seed ortholog is F1NI94 (24 bits away from this cluster)

Group of orthologs #3421. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 G.gallus:153

F6RYV9              	100.00%		Q5ZKP7              	100.00%
                    	       		E1C5T1              	41.75%
                    	       		F1NB96              	35.25%
Bootstrap support for F6RYV9 as seed ortholog is 99%.
Bootstrap support for Q5ZKP7 as seed ortholog is 99%.

Group of orthologs #3422. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 G.gallus:219

H2XMP2              	100.00%		F1P3K1              	100.00%
F6PHL6              	10.33%		P79779              	72.68%
Bootstrap support for H2XMP2 as seed ortholog is 100%.
Bootstrap support for F1P3K1 as seed ortholog is 100%.

Group of orthologs #3423. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 G.gallus:219

F6UMA7              	100.00%		E1C8Z9              	100.00%
                    	       		Q6XBN6              	9.74%
Bootstrap support for F6UMA7 as seed ortholog is 100%.
Bootstrap support for E1C8Z9 as seed ortholog is 100%.

Group of orthologs #3424. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 G.gallus:78

F7BGY2              	100.00%		E1C6D8              	100.00%
                    	       		E1C196              	22.28%
Bootstrap support for F7BGY2 as seed ortholog is 100%.
Bootstrap support for E1C6D8 as seed ortholog is 99%.

Group of orthologs #3425. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 G.gallus:219

H2XKF1              	100.00%		F1NLV3              	100.00%
                    	       		F1NAL9              	13.09%
Bootstrap support for H2XKF1 as seed ortholog is 100%.
Bootstrap support for F1NLV3 as seed ortholog is 100%.

Group of orthologs #3426. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 G.gallus:219

F6ZYA6              	100.00%		Q5ZHP5              	100.00%
                    	       		E1C252              	33.48%
Bootstrap support for F6ZYA6 as seed ortholog is 100%.
Bootstrap support for Q5ZHP5 as seed ortholog is 100%.

Group of orthologs #3427. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 G.gallus:219

F6Y6K2              	100.00%		F1NR97              	100.00%
Bootstrap support for F6Y6K2 as seed ortholog is 100%.
Bootstrap support for F1NR97 as seed ortholog is 100%.

Group of orthologs #3428. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 G.gallus:219

H2XX64              	100.00%		F1N9X9              	100.00%
Bootstrap support for H2XX64 as seed ortholog is 100%.
Bootstrap support for F1N9X9 as seed ortholog is 100%.

Group of orthologs #3429. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 G.gallus:175

F6WMA6              	100.00%		Q5ZJJ9              	100.00%
Bootstrap support for F6WMA6 as seed ortholog is 100%.
Bootstrap support for Q5ZJJ9 as seed ortholog is 100%.

Group of orthologs #3430. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 G.gallus:53

F6UYC8              	100.00%		Q58G84              	100.00%
                    	       		F1NJP5              	40.30%
                    	       		A9UGZ3              	24.33%
                    	       		Q4ZJF2              	23.76%
                    	       		F1NVL8              	20.34%
                    	       		E1C327              	8.75%
                    	       		E1C219              	7.98%
                    	       		F1NW54              	7.41%
                    	       		E1C0V9              	6.08%
                    	       		E1C8M0              	5.51%
Bootstrap support for F6UYC8 as seed ortholog is 83%.
Bootstrap support for Q58G84 as seed ortholog is 94%.

Group of orthologs #3431. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 G.gallus:218

F6XTZ6              	100.00%		H9KYU8              	100.00%
                    	       		F1NQB4              	15.28%
Bootstrap support for F6XTZ6 as seed ortholog is 100%.
Bootstrap support for H9KYU8 as seed ortholog is 100%.

Group of orthologs #3432. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 G.gallus:218

H2XZ76              	100.00%		F1P078              	100.00%
                    	       		E1BRD2              	66.67%
Bootstrap support for H2XZ76 as seed ortholog is 100%.
Bootstrap support for F1P078 as seed ortholog is 100%.

Group of orthologs #3433. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 G.gallus:218

F6V2H0              	100.00%		F1NAN3              	100.00%
Bootstrap support for F6V2H0 as seed ortholog is 100%.
Bootstrap support for F1NAN3 as seed ortholog is 100%.

Group of orthologs #3434. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 G.gallus:218

F7ABY6              	100.00%		E1BXU3              	100.00%
Bootstrap support for F7ABY6 as seed ortholog is 100%.
Bootstrap support for E1BXU3 as seed ortholog is 100%.

Group of orthologs #3435. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 G.gallus:218

F6W1S6              	100.00%		F1N9T7              	100.00%
Bootstrap support for F6W1S6 as seed ortholog is 100%.
Bootstrap support for F1N9T7 as seed ortholog is 100%.

Group of orthologs #3436. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 G.gallus:218

F7ATQ3              	100.00%		E1C1M8              	100.00%
Bootstrap support for F7ATQ3 as seed ortholog is 100%.
Bootstrap support for E1C1M8 as seed ortholog is 100%.

Group of orthologs #3437. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 G.gallus:218

F6U6R8              	100.00%		F1NVJ5              	100.00%
Bootstrap support for F6U6R8 as seed ortholog is 100%.
Bootstrap support for F1NVJ5 as seed ortholog is 100%.

Group of orthologs #3438. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 G.gallus:170

F6XY36              	100.00%		F1NJM2              	100.00%
Bootstrap support for F6XY36 as seed ortholog is 71%.
Alternative seed ortholog is F6R1K9 (18 bits away from this cluster)
Bootstrap support for F1NJM2 as seed ortholog is 100%.

Group of orthologs #3439. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 G.gallus:218

F7AH68              	100.00%		F1NEJ7              	100.00%
Bootstrap support for F7AH68 as seed ortholog is 100%.
Bootstrap support for F1NEJ7 as seed ortholog is 100%.

Group of orthologs #3440. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 G.gallus:38

H2XXE6              	100.00%		E1C2G2              	100.00%
Bootstrap support for H2XXE6 as seed ortholog is 100%.
Bootstrap support for E1C2G2 as seed ortholog is 87%.

Group of orthologs #3441. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 G.gallus:218

H2Y0X5              	100.00%		F1NXZ7              	100.00%
Bootstrap support for H2Y0X5 as seed ortholog is 100%.
Bootstrap support for F1NXZ7 as seed ortholog is 100%.

Group of orthologs #3442. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 G.gallus:217

H2XL14              	100.00%		Q401B9              	100.00%
                    	       		E1BT86              	12.22%
                    	       		Q401C0              	10.00%
Bootstrap support for H2XL14 as seed ortholog is 100%.
Bootstrap support for Q401B9 as seed ortholog is 100%.

Group of orthologs #3443. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 G.gallus:217

F6S8N1              	100.00%		E1C144              	100.00%
                    	       		E1BZ83              	20.94%
Bootstrap support for F6S8N1 as seed ortholog is 100%.
Bootstrap support for E1C144 as seed ortholog is 100%.

Group of orthologs #3444. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 G.gallus:115

H2XYZ0              	100.00%		E1BQX0              	100.00%
                    	       		P53411              	63.61%
Bootstrap support for H2XYZ0 as seed ortholog is 100%.
Bootstrap support for E1BQX0 as seed ortholog is 99%.

Group of orthologs #3445. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 G.gallus:128

Q4H2U5              	100.00%		F1NM64              	100.00%
                    	       		Q9DEQ4              	24.15%
Bootstrap support for Q4H2U5 as seed ortholog is 100%.
Bootstrap support for F1NM64 as seed ortholog is 99%.

Group of orthologs #3446. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 G.gallus:84

H2Y3H7              	100.00%		F1NP56              	100.00%
                    	       		E1BUG8              	7.50%
Bootstrap support for H2Y3H7 as seed ortholog is 81%.
Bootstrap support for F1NP56 as seed ortholog is 97%.

Group of orthologs #3447. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 G.gallus:217

H2XQP9              	100.00%		E1BRV7              	100.00%
Bootstrap support for H2XQP9 as seed ortholog is 100%.
Bootstrap support for E1BRV7 as seed ortholog is 100%.

Group of orthologs #3448. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 G.gallus:217

F6QU80              	100.00%		F1P3V2              	100.00%
Bootstrap support for F6QU80 as seed ortholog is 100%.
Bootstrap support for F1P3V2 as seed ortholog is 100%.

Group of orthologs #3449. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:50

H2XLZ0              	100.00%		F1NLA3              	100.00%
Bootstrap support for H2XLZ0 as seed ortholog is 99%.
Bootstrap support for F1NLA3 as seed ortholog is 95%.

Group of orthologs #3450. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 G.gallus:217

H2XL84              	100.00%		F1NWV5              	100.00%
Bootstrap support for H2XL84 as seed ortholog is 100%.
Bootstrap support for F1NWV5 as seed ortholog is 100%.

Group of orthologs #3451. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 G.gallus:217

H2Y2D1              	100.00%		F1NSB5              	100.00%
Bootstrap support for H2Y2D1 as seed ortholog is 100%.
Bootstrap support for F1NSB5 as seed ortholog is 100%.

Group of orthologs #3452. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 G.gallus:113

H2Y1V5              	100.00%		Q5ZM44              	100.00%
Bootstrap support for H2Y1V5 as seed ortholog is 100%.
Bootstrap support for Q5ZM44 as seed ortholog is 99%.

Group of orthologs #3453. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 G.gallus:124

H2Y012              	100.00%		Q50L44              	100.00%
                    	       		F1NFK3              	52.48%
                    	       		F1NDR0              	47.91%
Bootstrap support for H2Y012 as seed ortholog is 81%.
Bootstrap support for Q50L44 as seed ortholog is 99%.

Group of orthologs #3454. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 G.gallus:216

F6RL73              	100.00%		E1C4G0              	100.00%
                    	       		F1NQH7              	40.67%
Bootstrap support for F6RL73 as seed ortholog is 100%.
Bootstrap support for E1C4G0 as seed ortholog is 100%.

Group of orthologs #3455. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 G.gallus:216

F6SNN1              	100.00%		E1BYD2              	100.00%
Bootstrap support for F6SNN1 as seed ortholog is 100%.
Bootstrap support for E1BYD2 as seed ortholog is 100%.

Group of orthologs #3456. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 G.gallus:216

F6V580              	100.00%		E1BUI2              	100.00%
Bootstrap support for F6V580 as seed ortholog is 100%.
Bootstrap support for E1BUI2 as seed ortholog is 100%.

Group of orthologs #3457. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 G.gallus:216

F6XCL4              	100.00%		E1BUZ7              	100.00%
Bootstrap support for F6XCL4 as seed ortholog is 100%.
Bootstrap support for E1BUZ7 as seed ortholog is 100%.

Group of orthologs #3458. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 G.gallus:216

F6Z6N2              	100.00%		E1BQK7              	100.00%
Bootstrap support for F6Z6N2 as seed ortholog is 100%.
Bootstrap support for E1BQK7 as seed ortholog is 100%.

Group of orthologs #3459. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 G.gallus:216

F6ZFY8              	100.00%		F1N818              	100.00%
Bootstrap support for F6ZFY8 as seed ortholog is 100%.
Bootstrap support for F1N818 as seed ortholog is 100%.

Group of orthologs #3460. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 G.gallus:58

F6SJE3              	100.00%		Q49B65              	100.00%
Bootstrap support for F6SJE3 as seed ortholog is 100%.
Bootstrap support for Q49B65 as seed ortholog is 95%.

Group of orthologs #3461. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 G.gallus:216

F7A9A6              	100.00%		F1NXX2              	100.00%
Bootstrap support for F7A9A6 as seed ortholog is 100%.
Bootstrap support for F1NXX2 as seed ortholog is 100%.

Group of orthologs #3462. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:70

F6WZ85              	100.00%		Q98TX7              	100.00%
                    	       		Q90871              	11.92%
                    	       		F1P1B0              	10.82%
Bootstrap support for F6WZ85 as seed ortholog is 99%.
Bootstrap support for Q98TX7 as seed ortholog is 81%.

Group of orthologs #3463. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 G.gallus:215

Q4H3U1              	100.00%		Q5ZJG3              	100.00%
                    	       		H9L166              	36.96%
                    	       		H9KYT4              	21.74%
Bootstrap support for Q4H3U1 as seed ortholog is 100%.
Bootstrap support for Q5ZJG3 as seed ortholog is 100%.

Group of orthologs #3464. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 G.gallus:215

F6U3F2              	100.00%		E1BW94              	100.00%
Bootstrap support for F6U3F2 as seed ortholog is 100%.
Bootstrap support for E1BW94 as seed ortholog is 100%.

Group of orthologs #3465. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 G.gallus:215

F6VLQ0              	100.00%		E1C530              	100.00%
Bootstrap support for F6VLQ0 as seed ortholog is 100%.
Bootstrap support for E1C530 as seed ortholog is 100%.

Group of orthologs #3466. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 G.gallus:215

F6ZZX7              	100.00%		F1NAS0              	100.00%
Bootstrap support for F6ZZX7 as seed ortholog is 100%.
Bootstrap support for F1NAS0 as seed ortholog is 100%.

Group of orthologs #3467. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 G.gallus:214

F6UI12              	100.00%		E1C5A1              	100.00%
                    	       		F1N901              	44.26%
                    	       		Q5F407              	42.15%
Bootstrap support for F6UI12 as seed ortholog is 100%.
Bootstrap support for E1C5A1 as seed ortholog is 100%.

Group of orthologs #3468. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 G.gallus:214

F6UV64              	100.00%		E1BZ95              	100.00%
                    	       		F1NI15              	6.67%
Bootstrap support for F6UV64 as seed ortholog is 100%.
Bootstrap support for E1BZ95 as seed ortholog is 100%.

Group of orthologs #3469. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 G.gallus:214

H2XYD5              	100.00%		E1BXZ1              	100.00%
Bootstrap support for H2XYD5 as seed ortholog is 100%.
Bootstrap support for E1BXZ1 as seed ortholog is 100%.

Group of orthologs #3470. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 G.gallus:214

F6RG94              	100.00%		Q5J7N5              	100.00%
Bootstrap support for F6RG94 as seed ortholog is 100%.
Bootstrap support for Q5J7N5 as seed ortholog is 100%.

Group of orthologs #3471. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:31

H2XT04              	100.00%		O42392              	100.00%
Bootstrap support for H2XT04 as seed ortholog is 99%.
Bootstrap support for O42392 as seed ortholog is 81%.

Group of orthologs #3472. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 G.gallus:130

F6S6I4              	100.00%		Q5ZJR8              	100.00%
H2XMQ5              	5.08%		F1NQR3              	23.67%
Bootstrap support for F6S6I4 as seed ortholog is 66%.
Alternative seed ortholog is F6SPL5 (9 bits away from this cluster)
Bootstrap support for Q5ZJR8 as seed ortholog is 99%.

Group of orthologs #3473. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 G.gallus:213

F6T9U4              	100.00%		Q5R2I8              	100.00%
                    	       		F1NSX1              	37.23%
Bootstrap support for F6T9U4 as seed ortholog is 100%.
Bootstrap support for Q5R2I8 as seed ortholog is 100%.

Group of orthologs #3474. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 G.gallus:213

Q8HIN0              	100.00%		H9L3V9              	100.00%
                    	       		P18939              	100.00%
Bootstrap support for Q8HIN0 as seed ortholog is 100%.
Bootstrap support for H9L3V9 as seed ortholog is 100%.
Bootstrap support for P18939 as seed ortholog is 100%.

Group of orthologs #3475. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 G.gallus:3

F6W1X7              	100.00%		F1N914              	100.00%
Bootstrap support for F6W1X7 as seed ortholog is 97%.
Bootstrap support for F1N914 as seed ortholog is 56%.
Alternative seed ortholog is E1BZG5 (3 bits away from this cluster)

Group of orthologs #3476. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 G.gallus:213

F6YY07              	100.00%		E1C267              	100.00%
Bootstrap support for F6YY07 as seed ortholog is 100%.
Bootstrap support for E1C267 as seed ortholog is 100%.

Group of orthologs #3477. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 G.gallus:213

F6WWT1              	100.00%		F1P0I7              	100.00%
Bootstrap support for F6WWT1 as seed ortholog is 100%.
Bootstrap support for F1P0I7 as seed ortholog is 100%.

Group of orthologs #3478. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 G.gallus:212

Q4H3E0              	100.00%		P26584              	100.00%
                    	       		Q9YH06              	63.35%
                    	       		P40618              	41.63%
                    	       		P36194              	37.56%
Bootstrap support for Q4H3E0 as seed ortholog is 100%.
Bootstrap support for P26584 as seed ortholog is 100%.

Group of orthologs #3479. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 G.gallus:212

F6PUJ2              	100.00%		E1C1G8              	100.00%
                    	       		E1C6M8              	29.40%
Bootstrap support for F6PUJ2 as seed ortholog is 86%.
Bootstrap support for E1C1G8 as seed ortholog is 100%.

Group of orthologs #3480. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 G.gallus:166

F6Y3T4              	100.00%		E1C319              	100.00%
                    	       		Q5ZMP2              	18.55%
Bootstrap support for F6Y3T4 as seed ortholog is 100%.
Bootstrap support for E1C319 as seed ortholog is 100%.

Group of orthologs #3481. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 G.gallus:212

F6ZEU6              	100.00%		E1BRP2              	100.00%
Bootstrap support for F6ZEU6 as seed ortholog is 100%.
Bootstrap support for E1BRP2 as seed ortholog is 100%.

Group of orthologs #3482. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 G.gallus:9

F6S9V9              	100.00%		F1NZZ9              	100.00%
Bootstrap support for F6S9V9 as seed ortholog is 90%.
Bootstrap support for F1NZZ9 as seed ortholog is 61%.
Alternative seed ortholog is F1NDU7 (9 bits away from this cluster)

Group of orthologs #3483. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 G.gallus:212

H2XLC8              	100.00%		E1C1C0              	100.00%
Bootstrap support for H2XLC8 as seed ortholog is 100%.
Bootstrap support for E1C1C0 as seed ortholog is 100%.

Group of orthologs #3484. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 G.gallus:123

H2XSN5              	100.00%		E1C4A5              	100.00%
Bootstrap support for H2XSN5 as seed ortholog is 100%.
Bootstrap support for E1C4A5 as seed ortholog is 100%.

Group of orthologs #3485. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 G.gallus:212

H2XM10              	100.00%		F1NGC3              	100.00%
Bootstrap support for H2XM10 as seed ortholog is 100%.
Bootstrap support for F1NGC3 as seed ortholog is 100%.

Group of orthologs #3486. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 G.gallus:212

H2Y0L1              	100.00%		E1C3K8              	100.00%
Bootstrap support for H2Y0L1 as seed ortholog is 100%.
Bootstrap support for E1C3K8 as seed ortholog is 100%.

Group of orthologs #3487. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 G.gallus:212

H2XUB4              	100.00%		F1NPB1              	100.00%
Bootstrap support for H2XUB4 as seed ortholog is 100%.
Bootstrap support for F1NPB1 as seed ortholog is 100%.

Group of orthologs #3488. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 G.gallus:212

H2XNC6              	100.00%		H9KZ31              	100.00%
Bootstrap support for H2XNC6 as seed ortholog is 100%.
Bootstrap support for H9KZ31 as seed ortholog is 100%.

Group of orthologs #3489. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:65

B5UA19              	100.00%		F1NV74              	100.00%
                    	       		F1NVW1              	10.99%
                    	       		F1NA46              	6.78%
Bootstrap support for B5UA19 as seed ortholog is 99%.
Bootstrap support for F1NV74 as seed ortholog is 96%.

Group of orthologs #3490. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 G.gallus:211

F6QZF6              	100.00%		E1BRJ7              	100.00%
Bootstrap support for F6QZF6 as seed ortholog is 100%.
Bootstrap support for E1BRJ7 as seed ortholog is 100%.

Group of orthologs #3491. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 G.gallus:211

F6R1F8              	100.00%		E1BVN7              	100.00%
Bootstrap support for F6R1F8 as seed ortholog is 100%.
Bootstrap support for E1BVN7 as seed ortholog is 100%.

Group of orthologs #3492. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 G.gallus:211

F6UW27              	100.00%		E1BW60              	100.00%
Bootstrap support for F6UW27 as seed ortholog is 100%.
Bootstrap support for E1BW60 as seed ortholog is 100%.

Group of orthologs #3493. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 G.gallus:211

F6TVK0              	100.00%		F1NJ42              	100.00%
Bootstrap support for F6TVK0 as seed ortholog is 100%.
Bootstrap support for F1NJ42 as seed ortholog is 100%.

Group of orthologs #3494. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 G.gallus:137

H2XSP6              	100.00%		E1C4K5              	100.00%
Bootstrap support for H2XSP6 as seed ortholog is 100%.
Bootstrap support for E1C4K5 as seed ortholog is 99%.

Group of orthologs #3495. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:39

F6UBJ9              	100.00%		Q8UVE3              	100.00%
Bootstrap support for F6UBJ9 as seed ortholog is 92%.
Bootstrap support for Q8UVE3 as seed ortholog is 96%.

Group of orthologs #3496. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 G.gallus:211

F6XUK1              	100.00%		Q5F3A2              	100.00%
Bootstrap support for F6XUK1 as seed ortholog is 100%.
Bootstrap support for Q5F3A2 as seed ortholog is 100%.

Group of orthologs #3497. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 G.gallus:211

F6XPS9              	100.00%		Q5ZKJ3              	100.00%
Bootstrap support for F6XPS9 as seed ortholog is 100%.
Bootstrap support for Q5ZKJ3 as seed ortholog is 100%.

Group of orthologs #3498. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:210

F6TYR7              	100.00%		F1NE77              	100.00%
                    	       		E1C623              	35.16%
                    	       		F1NG81              	33.65%
Bootstrap support for F6TYR7 as seed ortholog is 100%.
Bootstrap support for F1NE77 as seed ortholog is 100%.

Group of orthologs #3499. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:210

F6U7G3              	100.00%		F1NJ38              	100.00%
                    	       		F1NNF2              	20.93%
                    	       		F1NAU5              	16.29%
Bootstrap support for F6U7G3 as seed ortholog is 100%.
Bootstrap support for F1NJ38 as seed ortholog is 100%.

Group of orthologs #3500. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:90

F6TX70              	100.00%		F1NA93              	100.00%
F6TX66              	63.43%		
Bootstrap support for F6TX70 as seed ortholog is 100%.
Bootstrap support for F1NA93 as seed ortholog is 98%.

Group of orthologs #3501. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:96

F7BLB2              	100.00%		E1BSX6              	100.00%
F6UHP1              	11.94%		
Bootstrap support for F7BLB2 as seed ortholog is 100%.
Bootstrap support for E1BSX6 as seed ortholog is 99%.

Group of orthologs #3502. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:210

F7AFW8              	100.00%		E1C4G1              	100.00%
                    	       		F1NFK8              	14.00%
Bootstrap support for F7AFW8 as seed ortholog is 100%.
Bootstrap support for E1C4G1 as seed ortholog is 100%.

Group of orthologs #3503. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:210

F6SD85              	100.00%		Q06066              	100.00%
                    	       		E1C9B8              	9.07%
Bootstrap support for F6SD85 as seed ortholog is 100%.
Bootstrap support for Q06066 as seed ortholog is 100%.

Group of orthologs #3504. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:144

H2XJJ8              	100.00%		Q5ZMA3              	100.00%
                    	       		Q5ZJX4              	48.37%
Bootstrap support for H2XJJ8 as seed ortholog is 100%.
Bootstrap support for Q5ZMA3 as seed ortholog is 99%.

Group of orthologs #3505. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:210

F6T047              	100.00%		E1C6N9              	100.00%
Bootstrap support for F6T047 as seed ortholog is 100%.
Bootstrap support for E1C6N9 as seed ortholog is 100%.

Group of orthologs #3506. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:210

F6W7Y4              	100.00%		E1C1X6              	100.00%
Bootstrap support for F6W7Y4 as seed ortholog is 100%.
Bootstrap support for E1C1X6 as seed ortholog is 100%.

Group of orthologs #3507. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:210

F6UZ84              	100.00%		F1NA81              	100.00%
Bootstrap support for F6UZ84 as seed ortholog is 100%.
Bootstrap support for F1NA81 as seed ortholog is 100%.

Group of orthologs #3508. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:149

F6ZAE1              	100.00%		E1BZH4              	100.00%
Bootstrap support for F6ZAE1 as seed ortholog is 95%.
Bootstrap support for E1BZH4 as seed ortholog is 99%.

Group of orthologs #3509. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 G.gallus:153

F6ZBE4              	100.00%		Q5ZKR4              	100.00%
Bootstrap support for F6ZBE4 as seed ortholog is 100%.
Bootstrap support for Q5ZKR4 as seed ortholog is 100%.

Group of orthologs #3510. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:210

F7BHV9              	100.00%		Q8UVV7              	100.00%
Bootstrap support for F7BHV9 as seed ortholog is 100%.
Bootstrap support for Q8UVV7 as seed ortholog is 100%.

Group of orthologs #3511. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:210

H2XRC4              	100.00%		Q5ZI51              	100.00%
Bootstrap support for H2XRC4 as seed ortholog is 100%.
Bootstrap support for Q5ZI51 as seed ortholog is 100%.

Group of orthologs #3512. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 G.gallus:79

Q4H2U4              	100.00%		Q9IA96              	100.00%
Bootstrap support for Q4H2U4 as seed ortholog is 100%.
Bootstrap support for Q9IA96 as seed ortholog is 99%.

Group of orthologs #3513. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 G.gallus:55

F6S9Q0              	100.00%		P18861              	100.00%
F6T0Z3              	100.00%		E1BRZ1              	100.00%
F6S9P0              	51.78%		E1BQP7              	44.50%
Bootstrap support for F6S9Q0 as seed ortholog is 83%.
Bootstrap support for F6T0Z3 as seed ortholog is 68%.
Alternative seed ortholog is F7AWX4 (39 bits away from this cluster)
Bootstrap support for P18861 as seed ortholog is 92%.
Bootstrap support for E1BRZ1 as seed ortholog is 88%.

Group of orthologs #3514. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:209

F6RKI1              	100.00%		F1NYM6              	100.00%
                    	       		Q5ZJ65              	50.00%
Bootstrap support for F6RKI1 as seed ortholog is 100%.
Bootstrap support for F1NYM6 as seed ortholog is 100%.

Group of orthologs #3515. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:209

F6WIN9              	100.00%		P60878              	100.00%
                    	       		E1BRL4              	16.58%
Bootstrap support for F6WIN9 as seed ortholog is 100%.
Bootstrap support for P60878 as seed ortholog is 100%.

Group of orthologs #3516. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:209

H2XRE1              	100.00%		F1NN78              	100.00%
                    	       		E1BTL5              	28.40%
Bootstrap support for H2XRE1 as seed ortholog is 100%.
Bootstrap support for F1NN78 as seed ortholog is 100%.

Group of orthologs #3517. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:209

Q4H3D9              	100.00%		F1N8B1              	100.00%
                    	       		Q5ZKF4              	99.59%
Bootstrap support for Q4H3D9 as seed ortholog is 100%.
Bootstrap support for F1N8B1 as seed ortholog is 100%.

Group of orthologs #3518. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:209

F6Z2T6              	100.00%		Q5ZLW2              	100.00%
                    	       		Q5ZL05              	26.14%
Bootstrap support for F6Z2T6 as seed ortholog is 100%.
Bootstrap support for Q5ZLW2 as seed ortholog is 100%.

Group of orthologs #3519. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:209

H2XK44              	100.00%		O93480              	100.00%
                    	       		F1ND82              	27.65%
Bootstrap support for H2XK44 as seed ortholog is 100%.
Bootstrap support for O93480 as seed ortholog is 100%.

Group of orthologs #3520. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 G.gallus:107

H2Y1W9              	100.00%		Q5ZMI0              	100.00%
                    	       		E1BVX5              	84.62%
Bootstrap support for H2Y1W9 as seed ortholog is 69%.
Alternative seed ortholog is F6YB82 (8 bits away from this cluster)
Bootstrap support for Q5ZMI0 as seed ortholog is 99%.

Group of orthologs #3521. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:63

F6UTG5              	100.00%		E1C2J6              	100.00%
Bootstrap support for F6UTG5 as seed ortholog is 100%.
Bootstrap support for E1C2J6 as seed ortholog is 99%.

Group of orthologs #3522. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:122

F6Y1B6              	100.00%		E1BVB5              	100.00%
Bootstrap support for F6Y1B6 as seed ortholog is 100%.
Bootstrap support for E1BVB5 as seed ortholog is 99%.

Group of orthologs #3523. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:209

F6WH15              	100.00%		F1NF89              	100.00%
Bootstrap support for F6WH15 as seed ortholog is 100%.
Bootstrap support for F1NF89 as seed ortholog is 100%.

Group of orthologs #3524. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:209

H2XZV1              	100.00%		E1BRK1              	100.00%
Bootstrap support for H2XZV1 as seed ortholog is 100%.
Bootstrap support for E1BRK1 as seed ortholog is 100%.

Group of orthologs #3525. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:209

F7B5M3              	100.00%		F1NDZ7              	100.00%
Bootstrap support for F7B5M3 as seed ortholog is 100%.
Bootstrap support for F1NDZ7 as seed ortholog is 100%.

Group of orthologs #3526. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:209

F7AVR1              	100.00%		F1NNJ9              	100.00%
Bootstrap support for F7AVR1 as seed ortholog is 100%.
Bootstrap support for F1NNJ9 as seed ortholog is 100%.

Group of orthologs #3527. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:44

H2XPM9              	100.00%		F1NPS5              	100.00%
Bootstrap support for H2XPM9 as seed ortholog is 100%.
Bootstrap support for F1NPS5 as seed ortholog is 97%.

Group of orthologs #3528. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:209

F7BB49              	100.00%		Q5ZL04              	100.00%
Bootstrap support for F7BB49 as seed ortholog is 100%.
Bootstrap support for Q5ZL04 as seed ortholog is 100%.

Group of orthologs #3529. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 G.gallus:209

H2Y3T4              	100.00%		Q5ZIV5              	100.00%
Bootstrap support for H2Y3T4 as seed ortholog is 100%.
Bootstrap support for Q5ZIV5 as seed ortholog is 100%.

Group of orthologs #3530. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 G.gallus:28

F6UJX7              	100.00%		F1NFI9              	100.00%
F6UAK1              	50.90%		
F6WBD4              	47.98%		
F6T4X9              	47.09%		
H2XZP0              	6.28%		
Bootstrap support for F6UJX7 as seed ortholog is 68%.
Alternative seed ortholog is H2Y0T8 (20 bits away from this cluster)
Bootstrap support for F1NFI9 as seed ortholog is 73%.
Alternative seed ortholog is E1BY61 (28 bits away from this cluster)

Group of orthologs #3531. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 G.gallus:208

F6VGB1              	100.00%		E1BQM3              	100.00%
Bootstrap support for F6VGB1 as seed ortholog is 100%.
Bootstrap support for E1BQM3 as seed ortholog is 100%.

Group of orthologs #3532. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 G.gallus:208

F6Y043              	100.00%		F1NEA8              	100.00%
Bootstrap support for F6Y043 as seed ortholog is 100%.
Bootstrap support for F1NEA8 as seed ortholog is 100%.

Group of orthologs #3533. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 G.gallus:11

H2XQ27              	100.00%		E1BX59              	100.00%
Bootstrap support for H2XQ27 as seed ortholog is 100%.
Bootstrap support for E1BX59 as seed ortholog is 59%.
Alternative seed ortholog is F1P1K7 (11 bits away from this cluster)

Group of orthologs #3534. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 G.gallus:208

F6S4X0              	100.00%		Q5ZII3              	100.00%
Bootstrap support for F6S4X0 as seed ortholog is 100%.
Bootstrap support for Q5ZII3 as seed ortholog is 100%.

Group of orthologs #3535. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 G.gallus:208

H2XP26              	100.00%		F1NF91              	100.00%
Bootstrap support for H2XP26 as seed ortholog is 100%.
Bootstrap support for F1NF91 as seed ortholog is 100%.

Group of orthologs #3536. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:122

H2XXB3              	100.00%		F1NSQ6              	100.00%
Bootstrap support for H2XXB3 as seed ortholog is 100%.
Bootstrap support for F1NSQ6 as seed ortholog is 100%.

Group of orthologs #3537. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 G.gallus:137

H2XVX4              	100.00%		Q5ZKN2              	100.00%
Bootstrap support for H2XVX4 as seed ortholog is 100%.
Bootstrap support for Q5ZKN2 as seed ortholog is 100%.

Group of orthologs #3538. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 G.gallus:67

H2XWF3              	100.00%		Q90632              	100.00%
F6ZCN2              	31.56%		F1NSI6              	12.99%
                    	       		F1P1F5              	5.54%
Bootstrap support for H2XWF3 as seed ortholog is 64%.
Alternative seed ortholog is F6ZST9 (17 bits away from this cluster)
Bootstrap support for Q90632 as seed ortholog is 94%.

Group of orthologs #3539. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:87

F6VT59              	100.00%		F1NGQ7              	100.00%
                    	       		F1NYU0              	68.50%
                    	       		P02609              	42.52%
Bootstrap support for F6VT59 as seed ortholog is 99%.
Bootstrap support for F1NGQ7 as seed ortholog is 99%.

Group of orthologs #3540. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 G.gallus:207

F6QE53              	100.00%		F1NC47              	100.00%
                    	       		H9KZ44              	46.93%
Bootstrap support for F6QE53 as seed ortholog is 100%.
Bootstrap support for F1NC47 as seed ortholog is 100%.

Group of orthologs #3541. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 G.gallus:207

F6Q7X0              	100.00%		E1BZP1              	100.00%
Bootstrap support for F6Q7X0 as seed ortholog is 100%.
Bootstrap support for E1BZP1 as seed ortholog is 100%.

Group of orthologs #3542. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:207

F6S9I2              	100.00%		E1BWM0              	100.00%
Bootstrap support for F6S9I2 as seed ortholog is 100%.
Bootstrap support for E1BWM0 as seed ortholog is 100%.

Group of orthologs #3543. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 G.gallus:207

F6R192              	100.00%		E1C3S9              	100.00%
Bootstrap support for F6R192 as seed ortholog is 100%.
Bootstrap support for E1C3S9 as seed ortholog is 100%.

Group of orthologs #3544. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:207

F6U189              	100.00%		E1BZ41              	100.00%
Bootstrap support for F6U189 as seed ortholog is 99%.
Bootstrap support for E1BZ41 as seed ortholog is 100%.

Group of orthologs #3545. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 G.gallus:74

F7AAH4              	100.00%		E1C2P8              	100.00%
Bootstrap support for F7AAH4 as seed ortholog is 100%.
Bootstrap support for E1C2P8 as seed ortholog is 99%.

Group of orthologs #3546. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 G.gallus:207

H2XNZ7              	100.00%		E1BSR9              	100.00%
Bootstrap support for H2XNZ7 as seed ortholog is 100%.
Bootstrap support for E1BSR9 as seed ortholog is 100%.

Group of orthologs #3547. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 G.gallus:41

F6SPF7              	100.00%		F1P2U3              	100.00%
Bootstrap support for F6SPF7 as seed ortholog is 98%.
Bootstrap support for F1P2U3 as seed ortholog is 85%.

Group of orthologs #3548. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 G.gallus:207

F6PK60              	100.00%		Q5ZKK4              	100.00%
Bootstrap support for F6PK60 as seed ortholog is 100%.
Bootstrap support for Q5ZKK4 as seed ortholog is 100%.

Group of orthologs #3549. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 G.gallus:139

F6RGJ1              	100.00%		Q5ZMT4              	100.00%
Bootstrap support for F6RGJ1 as seed ortholog is 100%.
Bootstrap support for Q5ZMT4 as seed ortholog is 100%.

Group of orthologs #3550. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 G.gallus:207

F6YV15              	100.00%		F1NWV7              	100.00%
Bootstrap support for F6YV15 as seed ortholog is 100%.
Bootstrap support for F1NWV7 as seed ortholog is 100%.

Group of orthologs #3551. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 G.gallus:207

H2Y296              	100.00%		E1C1Y3              	100.00%
Bootstrap support for H2Y296 as seed ortholog is 100%.
Bootstrap support for E1C1Y3 as seed ortholog is 100%.

Group of orthologs #3552. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 G.gallus:207

F6WHB0              	100.00%		Q5ZIK4              	100.00%
Bootstrap support for F6WHB0 as seed ortholog is 100%.
Bootstrap support for Q5ZIK4 as seed ortholog is 100%.

Group of orthologs #3553. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 G.gallus:206

F6V9K6              	100.00%		P20136              	100.00%
F7AHC2              	11.41%		
Bootstrap support for F6V9K6 as seed ortholog is 89%.
Bootstrap support for P20136 as seed ortholog is 100%.

Group of orthologs #3554. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 G.gallus:140

F6V449              	100.00%		F1NUG2              	100.00%
Bootstrap support for F6V449 as seed ortholog is 99%.
Bootstrap support for F1NUG2 as seed ortholog is 99%.

Group of orthologs #3555. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 G.gallus:206

F6U3H2              	100.00%		F1P371              	100.00%
Bootstrap support for F6U3H2 as seed ortholog is 100%.
Bootstrap support for F1P371 as seed ortholog is 100%.

Group of orthologs #3556. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 G.gallus:206

F7A027              	100.00%		F1NIH1              	100.00%
Bootstrap support for F7A027 as seed ortholog is 100%.
Bootstrap support for F1NIH1 as seed ortholog is 100%.

Group of orthologs #3557. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 G.gallus:206

F6VZ53              	100.00%		F1P5H6              	100.00%
Bootstrap support for F6VZ53 as seed ortholog is 72%.
Alternative seed ortholog is H2XVW7 (17 bits away from this cluster)
Bootstrap support for F1P5H6 as seed ortholog is 100%.

Group of orthologs #3558. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 G.gallus:206

F6WF37              	100.00%		Q5ZKP4              	100.00%
Bootstrap support for F6WF37 as seed ortholog is 100%.
Bootstrap support for Q5ZKP4 as seed ortholog is 100%.

Group of orthologs #3559. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 G.gallus:206

Q6XLI4              	100.00%		F1NNR6              	100.00%
Bootstrap support for Q6XLI4 as seed ortholog is 100%.
Bootstrap support for F1NNR6 as seed ortholog is 100%.

Group of orthologs #3560. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 G.gallus:206

Q4H2W4              	100.00%		H9L298              	100.00%
Bootstrap support for Q4H2W4 as seed ortholog is 100%.
Bootstrap support for H9L298 as seed ortholog is 100%.

Group of orthologs #3561. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 G.gallus:72

F6XEB9              	100.00%		F1NV61              	100.00%
F6U351              	11.94%		O93417              	27.73%
Bootstrap support for F6XEB9 as seed ortholog is 66%.
Alternative seed ortholog is F6XYE9 (14 bits away from this cluster)
Bootstrap support for F1NV61 as seed ortholog is 97%.

Group of orthologs #3562. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 G.gallus:205

F6PR96              	100.00%		F1NH84              	100.00%
                    	       		F1NMJ2              	17.79%
Bootstrap support for F6PR96 as seed ortholog is 100%.
Bootstrap support for F1NH84 as seed ortholog is 100%.

Group of orthologs #3563. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 G.gallus:205

F7B8L3              	100.00%		B6UV99              	100.00%
Bootstrap support for F7B8L3 as seed ortholog is 100%.
Bootstrap support for B6UV99 as seed ortholog is 100%.

Group of orthologs #3564. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 G.gallus:205

F6ZH72              	100.00%		E1C7R6              	100.00%
Bootstrap support for F6ZH72 as seed ortholog is 100%.
Bootstrap support for E1C7R6 as seed ortholog is 100%.

Group of orthologs #3565. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 G.gallus:205

F6T3M6              	100.00%		F1P1G1              	100.00%
Bootstrap support for F6T3M6 as seed ortholog is 100%.
Bootstrap support for F1P1G1 as seed ortholog is 100%.

Group of orthologs #3566. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 G.gallus:205

F6ZE60              	100.00%		F1NIB7              	100.00%
Bootstrap support for F6ZE60 as seed ortholog is 100%.
Bootstrap support for F1NIB7 as seed ortholog is 100%.

Group of orthologs #3567. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 G.gallus:128

F6YVE9              	100.00%		F1P1R3              	100.00%
Bootstrap support for F6YVE9 as seed ortholog is 100%.
Bootstrap support for F1P1R3 as seed ortholog is 100%.

Group of orthologs #3568. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 G.gallus:58

F6Z998              	100.00%		P08636              	100.00%
Bootstrap support for F6Z998 as seed ortholog is 100%.
Bootstrap support for P08636 as seed ortholog is 99%.

Group of orthologs #3569. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 G.gallus:205

H2XSJ8              	100.00%		F1NYW2              	100.00%
Bootstrap support for H2XSJ8 as seed ortholog is 100%.
Bootstrap support for F1NYW2 as seed ortholog is 100%.

Group of orthologs #3570. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:204

F6RGB2              	100.00%		E1C134              	100.00%
                    	       		F1P4E1              	22.64%
Bootstrap support for F6RGB2 as seed ortholog is 100%.
Bootstrap support for E1C134 as seed ortholog is 100%.

Group of orthologs #3571. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:32

F6RUS9              	100.00%		E1C3J0              	100.00%
F6Q3M5              	20.00%		
Bootstrap support for F6RUS9 as seed ortholog is 100%.
Bootstrap support for E1C3J0 as seed ortholog is 82%.

Group of orthologs #3572. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:204

H2XRX1              	100.00%		F1NXL3              	100.00%
                    	       		H9KYW8              	23.09%
Bootstrap support for H2XRX1 as seed ortholog is 100%.
Bootstrap support for F1NXL3 as seed ortholog is 100%.

Group of orthologs #3573. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:204

Q4H2S2              	100.00%		Q9W7R5              	100.00%
                    	       		Q9W7R6              	26.23%
Bootstrap support for Q4H2S2 as seed ortholog is 100%.
Bootstrap support for Q9W7R5 as seed ortholog is 100%.

Group of orthologs #3574. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 G.gallus:138

F6YF45              	100.00%		E1C4H6              	100.00%
Bootstrap support for F6YF45 as seed ortholog is 100%.
Bootstrap support for E1C4H6 as seed ortholog is 100%.

Group of orthologs #3575. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:204

F7B9T1              	100.00%		E1BXR1              	100.00%
Bootstrap support for F7B9T1 as seed ortholog is 100%.
Bootstrap support for E1BXR1 as seed ortholog is 100%.

Group of orthologs #3576. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 G.gallus:50

F6SDR2              	100.00%		F1NSX4              	100.00%
Bootstrap support for F6SDR2 as seed ortholog is 95%.
Bootstrap support for F1NSX4 as seed ortholog is 90%.

Group of orthologs #3577. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:204

F6T1Y9              	100.00%		H9L0M7              	100.00%
Bootstrap support for F6T1Y9 as seed ortholog is 100%.
Bootstrap support for H9L0M7 as seed ortholog is 100%.

Group of orthologs #3578. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:204

H2XZ45              	100.00%		E1C7B7              	100.00%
Bootstrap support for H2XZ45 as seed ortholog is 100%.
Bootstrap support for E1C7B7 as seed ortholog is 100%.

Group of orthologs #3579. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:204

F7AX62              	100.00%		F1P581              	100.00%
Bootstrap support for F7AX62 as seed ortholog is 100%.
Bootstrap support for F1P581 as seed ortholog is 100%.

Group of orthologs #3580. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 G.gallus:48

H2Y2Q4              	100.00%		Q9YGS0              	100.00%
Bootstrap support for H2Y2Q4 as seed ortholog is 100%.
Bootstrap support for Q9YGS0 as seed ortholog is 83%.

Group of orthologs #3581. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 G.gallus:107

F6RGE7              	100.00%		E1BSH1              	100.00%
Bootstrap support for F6RGE7 as seed ortholog is 99%.
Bootstrap support for E1BSH1 as seed ortholog is 99%.

Group of orthologs #3582. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 G.gallus:203

F6R0P0              	100.00%		F1NH93              	100.00%
Bootstrap support for F6R0P0 as seed ortholog is 100%.
Bootstrap support for F1NH93 as seed ortholog is 100%.

Group of orthologs #3583. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 G.gallus:67

F6T0P8              	100.00%		F1NH70              	100.00%
Bootstrap support for F6T0P8 as seed ortholog is 99%.
Bootstrap support for F1NH70 as seed ortholog is 95%.

Group of orthologs #3584. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 G.gallus:203

H2XQG7              	100.00%		E1BSK7              	100.00%
Bootstrap support for H2XQG7 as seed ortholog is 100%.
Bootstrap support for E1BSK7 as seed ortholog is 100%.

Group of orthologs #3585. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 G.gallus:23

F6XTS5              	100.00%		F1NKH4              	100.00%
Bootstrap support for F6XTS5 as seed ortholog is 81%.
Bootstrap support for F1NKH4 as seed ortholog is 75%.

Group of orthologs #3586. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 G.gallus:203

F6ZKQ1              	100.00%		F1NML3              	100.00%
Bootstrap support for F6ZKQ1 as seed ortholog is 100%.
Bootstrap support for F1NML3 as seed ortholog is 100%.

Group of orthologs #3587. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 G.gallus:109

F6XKQ1              	100.00%		F1P0P3              	100.00%
Bootstrap support for F6XKQ1 as seed ortholog is 100%.
Bootstrap support for F1P0P3 as seed ortholog is 99%.

Group of orthologs #3588. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 G.gallus:203

H2XZ97              	100.00%		E1C259              	100.00%
Bootstrap support for H2XZ97 as seed ortholog is 100%.
Bootstrap support for E1C259 as seed ortholog is 100%.

Group of orthologs #3589. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 G.gallus:203

F7A102              	100.00%		F1NXJ9              	100.00%
Bootstrap support for F7A102 as seed ortholog is 100%.
Bootstrap support for F1NXJ9 as seed ortholog is 100%.

Group of orthologs #3590. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 G.gallus:203

F7A5U1              	100.00%		F1NZR9              	100.00%
Bootstrap support for F7A5U1 as seed ortholog is 100%.
Bootstrap support for F1NZR9 as seed ortholog is 100%.

Group of orthologs #3591. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 G.gallus:109

F6UB54              	100.00%		Q5ZM57              	100.00%
Bootstrap support for F6UB54 as seed ortholog is 100%.
Bootstrap support for Q5ZM57 as seed ortholog is 99%.

Group of orthologs #3592. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 G.gallus:113

H2Y3L9              	100.00%		F1NII6              	100.00%
Bootstrap support for H2Y3L9 as seed ortholog is 100%.
Bootstrap support for F1NII6 as seed ortholog is 100%.

Group of orthologs #3593. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 G.gallus:203

H2Y3J4              	100.00%		F1NU60              	100.00%
Bootstrap support for H2Y3J4 as seed ortholog is 100%.
Bootstrap support for F1NU60 as seed ortholog is 100%.

Group of orthologs #3594. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 G.gallus:143

F6XHG0              	100.00%		E1C2N7              	100.00%
                    	       		E1C3B7              	27.62%
                    	       		F1P4V3              	13.51%
                    	       		F1NS28              	8.65%
Bootstrap support for F6XHG0 as seed ortholog is 100%.
Bootstrap support for E1C2N7 as seed ortholog is 99%.

Group of orthologs #3595. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 G.gallus:202

F6QNF1              	100.00%		O73871              	100.00%
                    	       		F1NSP5              	23.43%
                    	       		Q5XFQ6              	17.17%
Bootstrap support for F6QNF1 as seed ortholog is 100%.
Bootstrap support for O73871 as seed ortholog is 100%.

Group of orthologs #3596. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 G.gallus:202

F6VGI1              	100.00%		Q5ZIN0              	100.00%
                    	       		F1NMM5              	16.17%
Bootstrap support for F6VGI1 as seed ortholog is 100%.
Bootstrap support for Q5ZIN0 as seed ortholog is 100%.

Group of orthologs #3597. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 G.gallus:134

H2XZ79              	100.00%		F1NY48              	100.00%
                    	       		F1NME7              	31.87%
Bootstrap support for H2XZ79 as seed ortholog is 100%.
Bootstrap support for F1NY48 as seed ortholog is 99%.

Group of orthologs #3598. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:88

F6PMJ3              	100.00%		F1NA17              	100.00%
Bootstrap support for F6PMJ3 as seed ortholog is 100%.
Bootstrap support for F1NA17 as seed ortholog is 99%.

Group of orthologs #3599. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 G.gallus:202

F6QTI2              	100.00%		F1P353              	100.00%
Bootstrap support for F6QTI2 as seed ortholog is 100%.
Bootstrap support for F1P353 as seed ortholog is 100%.

Group of orthologs #3600. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 G.gallus:202

F6SAX8              	100.00%		P84175              	100.00%
Bootstrap support for F6SAX8 as seed ortholog is 100%.
Bootstrap support for P84175 as seed ortholog is 100%.

Group of orthologs #3601. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 G.gallus:202

H2XZ67              	100.00%		E1C408              	100.00%
Bootstrap support for H2XZ67 as seed ortholog is 100%.
Bootstrap support for E1C408 as seed ortholog is 100%.

Group of orthologs #3602. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 G.gallus:202

F7AM07              	100.00%		P30352              	100.00%
Bootstrap support for F7AM07 as seed ortholog is 100%.
Bootstrap support for P30352 as seed ortholog is 100%.

Group of orthologs #3603. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 G.gallus:201

H2Y0R5              	100.00%		Q9DF37              	100.00%
                    	       		E1BTL7              	22.08%
Bootstrap support for H2Y0R5 as seed ortholog is 100%.
Bootstrap support for Q9DF37 as seed ortholog is 100%.

Group of orthologs #3604. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 G.gallus:201

F6QAG3              	100.00%		E1C984              	100.00%
Bootstrap support for F6QAG3 as seed ortholog is 100%.
Bootstrap support for E1C984 as seed ortholog is 100%.

Group of orthologs #3605. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 G.gallus:201

F6UBS8              	100.00%		E1C1Y8              	100.00%
Bootstrap support for F6UBS8 as seed ortholog is 100%.
Bootstrap support for E1C1Y8 as seed ortholog is 100%.

Group of orthologs #3606. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 G.gallus:99

F6XTM9              	100.00%		E1C3L3              	100.00%
Bootstrap support for F6XTM9 as seed ortholog is 100%.
Bootstrap support for E1C3L3 as seed ortholog is 99%.

Group of orthologs #3607. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 G.gallus:201

F6WIP7              	100.00%		E1C8K9              	100.00%
Bootstrap support for F6WIP7 as seed ortholog is 100%.
Bootstrap support for E1C8K9 as seed ortholog is 100%.

Group of orthologs #3608. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 G.gallus:201

F6VW31              	100.00%		F1NGV8              	100.00%
Bootstrap support for F6VW31 as seed ortholog is 100%.
Bootstrap support for F1NGV8 as seed ortholog is 100%.

Group of orthologs #3609. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 G.gallus:201

F6T8A4              	100.00%		F1NV66              	100.00%
Bootstrap support for F6T8A4 as seed ortholog is 100%.
Bootstrap support for F1NV66 as seed ortholog is 100%.

Group of orthologs #3610. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 G.gallus:201

F6R255              	100.00%		F1P3X5              	100.00%
Bootstrap support for F6R255 as seed ortholog is 100%.
Bootstrap support for F1P3X5 as seed ortholog is 100%.

Group of orthologs #3611. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 G.gallus:201

H2XVZ6              	100.00%		E1BS13              	100.00%
Bootstrap support for H2XVZ6 as seed ortholog is 100%.
Bootstrap support for E1BS13 as seed ortholog is 100%.

Group of orthologs #3612. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 G.gallus:201

F6YBU7              	100.00%		F1NKZ6              	100.00%
Bootstrap support for F6YBU7 as seed ortholog is 100%.
Bootstrap support for F1NKZ6 as seed ortholog is 100%.

Group of orthologs #3613. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 G.gallus:201

H2XQY5              	100.00%		E1C7U9              	100.00%
Bootstrap support for H2XQY5 as seed ortholog is 92%.
Bootstrap support for E1C7U9 as seed ortholog is 100%.

Group of orthologs #3614. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 G.gallus:201

H2XW33              	100.00%		F1NG40              	100.00%
Bootstrap support for H2XW33 as seed ortholog is 100%.
Bootstrap support for F1NG40 as seed ortholog is 100%.

Group of orthologs #3615. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 G.gallus:201

F6ZIC6              	100.00%		Q5ZKX6              	100.00%
Bootstrap support for F6ZIC6 as seed ortholog is 99%.
Bootstrap support for Q5ZKX6 as seed ortholog is 100%.

Group of orthologs #3616. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:45

H2Y2P7              	100.00%		F1NRQ5              	100.00%
Bootstrap support for H2Y2P7 as seed ortholog is 99%.
Bootstrap support for F1NRQ5 as seed ortholog is 89%.

Group of orthologs #3617. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 G.gallus:200

F6YWK0              	100.00%		E1C1T6              	100.00%
                    	       		E1C9E9              	32.11%
Bootstrap support for F6YWK0 as seed ortholog is 100%.
Bootstrap support for E1C1T6 as seed ortholog is 100%.

Group of orthologs #3618. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 G.gallus:200

F6WNU7              	100.00%		E1BT97              	100.00%
Bootstrap support for F6WNU7 as seed ortholog is 100%.
Bootstrap support for E1BT97 as seed ortholog is 100%.

Group of orthologs #3619. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 G.gallus:200

F6ZY66              	100.00%		E1BQJ7              	100.00%
Bootstrap support for F6ZY66 as seed ortholog is 100%.
Bootstrap support for E1BQJ7 as seed ortholog is 100%.

Group of orthologs #3620. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 G.gallus:200

F6XFG7              	100.00%		E1BZE7              	100.00%
Bootstrap support for F6XFG7 as seed ortholog is 100%.
Bootstrap support for E1BZE7 as seed ortholog is 100%.

Group of orthologs #3621. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:200

F6WC79              	100.00%		F1NC53              	100.00%
Bootstrap support for F6WC79 as seed ortholog is 99%.
Bootstrap support for F1NC53 as seed ortholog is 100%.

Group of orthologs #3622. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 G.gallus:124

F7B4Q5              	100.00%		F1ND33              	100.00%
Bootstrap support for F7B4Q5 as seed ortholog is 100%.
Bootstrap support for F1ND33 as seed ortholog is 99%.

Group of orthologs #3623. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 G.gallus:200

F6VXB1              	100.00%		F1P5Q9              	100.00%
Bootstrap support for F6VXB1 as seed ortholog is 100%.
Bootstrap support for F1P5Q9 as seed ortholog is 100%.

Group of orthologs #3624. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 G.gallus:200

H2XR58              	100.00%		F1ND04              	100.00%
Bootstrap support for H2XR58 as seed ortholog is 100%.
Bootstrap support for F1ND04 as seed ortholog is 100%.

Group of orthologs #3625. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 G.gallus:200

F6X073              	100.00%		Q5ZMC0              	100.00%
Bootstrap support for F6X073 as seed ortholog is 100%.
Bootstrap support for Q5ZMC0 as seed ortholog is 100%.

Group of orthologs #3626. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 G.gallus:200

H2XXU4              	100.00%		Q5ZIM6              	100.00%
Bootstrap support for H2XXU4 as seed ortholog is 100%.
Bootstrap support for Q5ZIM6 as seed ortholog is 100%.

Group of orthologs #3627. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 G.gallus:48

F7AXQ6              	100.00%		Q5ZLZ6              	100.00%
                    	       		F1NVU4              	58.02%
                    	       		E1C9D2              	43.83%
                    	       		E1BZT7              	5.80%
Bootstrap support for F7AXQ6 as seed ortholog is 82%.
Bootstrap support for Q5ZLZ6 as seed ortholog is 84%.

Group of orthologs #3628. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 G.gallus:29

F6QI05              	100.00%		P02263              	100.00%
                    	       		P70082              	90.38%
Bootstrap support for F6QI05 as seed ortholog is 100%.
Bootstrap support for P02263 as seed ortholog is 94%.

Group of orthologs #3629. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 G.gallus:199

Q4H3N0              	100.00%		F1NRR0              	100.00%
                    	       		Q5ZMM7              	100.00%
Bootstrap support for Q4H3N0 as seed ortholog is 100%.
Bootstrap support for F1NRR0 as seed ortholog is 100%.
Bootstrap support for Q5ZMM7 as seed ortholog is 100%.

Group of orthologs #3630. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 G.gallus:199

Q4H3A1              	100.00%		P18870              	100.00%
                    	       		P27921              	15.49%
Bootstrap support for Q4H3A1 as seed ortholog is 100%.
Bootstrap support for P18870 as seed ortholog is 100%.

Group of orthologs #3631. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 G.gallus:110

F6TXM9              	100.00%		E1C660              	100.00%
Bootstrap support for F6TXM9 as seed ortholog is 99%.
Bootstrap support for E1C660 as seed ortholog is 99%.

Group of orthologs #3632. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 G.gallus:199

F6Y4F7              	100.00%		E1BZI2              	100.00%
Bootstrap support for F6Y4F7 as seed ortholog is 100%.
Bootstrap support for E1BZI2 as seed ortholog is 100%.

Group of orthologs #3633. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 G.gallus:199

F7BNU5              	100.00%		E1C1M5              	100.00%
Bootstrap support for F7BNU5 as seed ortholog is 100%.
Bootstrap support for E1C1M5 as seed ortholog is 100%.

Group of orthologs #3634. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 G.gallus:127

H2XSH7              	100.00%		E1C3T6              	100.00%
Bootstrap support for H2XSH7 as seed ortholog is 100%.
Bootstrap support for E1C3T6 as seed ortholog is 100%.

Group of orthologs #3635. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 G.gallus:137

F6XEJ6              	100.00%		P79769              	100.00%
Bootstrap support for F6XEJ6 as seed ortholog is 100%.
Bootstrap support for P79769 as seed ortholog is 100%.

Group of orthologs #3636. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 G.gallus:198

Q4H3R5              	100.00%		E1BSK3              	100.00%
                    	       		H9L140              	35.58%
                    	       		F1N847              	35.12%
Bootstrap support for Q4H3R5 as seed ortholog is 100%.
Bootstrap support for E1BSK3 as seed ortholog is 100%.

Group of orthologs #3637. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 G.gallus:73

F6T302              	100.00%		P48430              	100.00%
                    	       		P48433              	37.92%
                    	       		O57401              	32.15%
Bootstrap support for F6T302 as seed ortholog is 100%.
Bootstrap support for P48430 as seed ortholog is 99%.

Group of orthologs #3638. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 G.gallus:63

H2XYF5              	100.00%		E1BWT8              	100.00%
                    	       		Q5ZLF8              	25.53%
Bootstrap support for H2XYF5 as seed ortholog is 100%.
Bootstrap support for E1BWT8 as seed ortholog is 99%.

Group of orthologs #3639. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 G.gallus:198

F7A2P1              	100.00%		F1NMH2              	100.00%
                    	       		E1C8C0              	18.73%
Bootstrap support for F7A2P1 as seed ortholog is 100%.
Bootstrap support for F1NMH2 as seed ortholog is 100%.

Group of orthologs #3640. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 G.gallus:198

F6S202              	100.00%		E1C9K3              	100.00%
Bootstrap support for F6S202 as seed ortholog is 100%.
Bootstrap support for E1C9K3 as seed ortholog is 100%.

Group of orthologs #3641. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 G.gallus:198

F6UFF5              	100.00%		E1C4N5              	100.00%
Bootstrap support for F6UFF5 as seed ortholog is 100%.
Bootstrap support for E1C4N5 as seed ortholog is 100%.

Group of orthologs #3642. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 G.gallus:198

F7AUU8              	100.00%		F1NJF5              	100.00%
Bootstrap support for F7AUU8 as seed ortholog is 100%.
Bootstrap support for F1NJF5 as seed ortholog is 100%.

Group of orthologs #3643. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 G.gallus:96

F7B9G3              	100.00%		O42220              	100.00%
Bootstrap support for F7B9G3 as seed ortholog is 100%.
Bootstrap support for O42220 as seed ortholog is 98%.

Group of orthologs #3644. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 G.gallus:198

H2XT68              	100.00%		F1P0V8              	100.00%
Bootstrap support for H2XT68 as seed ortholog is 100%.
Bootstrap support for F1P0V8 as seed ortholog is 100%.

Group of orthologs #3645. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 G.gallus:198

F7BMQ6              	100.00%		Q5ZJ07              	100.00%
Bootstrap support for F7BMQ6 as seed ortholog is 100%.
Bootstrap support for Q5ZJ07 as seed ortholog is 100%.

Group of orthologs #3646. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:197

H2XKU8              	100.00%		E1C4I5              	100.00%
                    	       		E1C2F0              	26.10%
                    	       		F1P4P3              	8.99%
                    	       		F1NW51              	7.89%
                    	       		F1NK69              	6.58%
                    	       		F1NL56              	6.58%
Bootstrap support for H2XKU8 as seed ortholog is 97%.
Bootstrap support for E1C4I5 as seed ortholog is 100%.

Group of orthologs #3647. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 G.gallus:51

H2XTV2              	100.00%		F1NUT9              	100.00%
                    	       		P68246              	9.94%
Bootstrap support for H2XTV2 as seed ortholog is 100%.
Bootstrap support for F1NUT9 as seed ortholog is 99%.

Group of orthologs #3648. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 G.gallus:197

F6UVN7              	100.00%		E1BW27              	100.00%
Bootstrap support for F6UVN7 as seed ortholog is 100%.
Bootstrap support for E1BW27 as seed ortholog is 100%.

Group of orthologs #3649. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 G.gallus:197

F6UQ68              	100.00%		E1BZR6              	100.00%
Bootstrap support for F6UQ68 as seed ortholog is 100%.
Bootstrap support for E1BZR6 as seed ortholog is 100%.

Group of orthologs #3650. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 G.gallus:197

F6QFI4              	100.00%		F1P528              	100.00%
Bootstrap support for F6QFI4 as seed ortholog is 100%.
Bootstrap support for F1P528 as seed ortholog is 100%.

Group of orthologs #3651. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 G.gallus:197

H2XLK9              	100.00%		E1C3X0              	100.00%
Bootstrap support for H2XLK9 as seed ortholog is 100%.
Bootstrap support for E1C3X0 as seed ortholog is 100%.

Group of orthologs #3652. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 G.gallus:197

F6WBQ8              	100.00%		Q5ZK82              	100.00%
Bootstrap support for F6WBQ8 as seed ortholog is 100%.
Bootstrap support for Q5ZK82 as seed ortholog is 100%.

Group of orthologs #3653. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 G.gallus:197

H2XU65              	100.00%		F1NWK4              	100.00%
Bootstrap support for H2XU65 as seed ortholog is 100%.
Bootstrap support for F1NWK4 as seed ortholog is 100%.

Group of orthologs #3654. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:196

H2Y2B7              	100.00%		F1NAX8              	100.00%
                    	       		F1NYW1              	5.37%
Bootstrap support for H2Y2B7 as seed ortholog is 97%.
Bootstrap support for F1NAX8 as seed ortholog is 100%.

Group of orthologs #3655. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 G.gallus:196

F6XWF2              	100.00%		E1BUF3              	100.00%
Bootstrap support for F6XWF2 as seed ortholog is 100%.
Bootstrap support for E1BUF3 as seed ortholog is 100%.

Group of orthologs #3656. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 G.gallus:196

F7ATN8              	100.00%		E1BWD4              	100.00%
Bootstrap support for F7ATN8 as seed ortholog is 99%.
Bootstrap support for E1BWD4 as seed ortholog is 100%.

Group of orthologs #3657. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 G.gallus:196

H2XK93              	100.00%		E1C1Q0              	100.00%
Bootstrap support for H2XK93 as seed ortholog is 100%.
Bootstrap support for E1C1Q0 as seed ortholog is 100%.

Group of orthologs #3658. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 G.gallus:196

F6QGB8              	100.00%		Q5ZJT7              	100.00%
Bootstrap support for F6QGB8 as seed ortholog is 100%.
Bootstrap support for Q5ZJT7 as seed ortholog is 100%.

Group of orthologs #3659. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 G.gallus:196

H2Y1Y8              	100.00%		E1BY89              	100.00%
Bootstrap support for H2Y1Y8 as seed ortholog is 100%.
Bootstrap support for E1BY89 as seed ortholog is 100%.

Group of orthologs #3660. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 G.gallus:41

H2XPL3              	100.00%		H9L2J4              	100.00%
Bootstrap support for H2XPL3 as seed ortholog is 100%.
Bootstrap support for H9L2J4 as seed ortholog is 97%.

Group of orthologs #3661. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 G.gallus:121

F6PYG2              	100.00%		E1BQM7              	100.00%
                    	       		E1BZB1              	7.39%
Bootstrap support for F6PYG2 as seed ortholog is 100%.
Bootstrap support for E1BQM7 as seed ortholog is 99%.

Group of orthologs #3662. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 G.gallus:195

F6VIC3              	100.00%		F1P206              	100.00%
                    	       		F1NSW0              	24.27%
Bootstrap support for F6VIC3 as seed ortholog is 100%.
Bootstrap support for F1P206 as seed ortholog is 100%.

Group of orthologs #3663. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 G.gallus:46

F6S8X6              	100.00%		Q98TF8              	100.00%
F6TP12              	100.00%		
Bootstrap support for F6S8X6 as seed ortholog is 100%.
Bootstrap support for F6TP12 as seed ortholog is 100%.
Bootstrap support for Q98TF8 as seed ortholog is 89%.

Group of orthologs #3664. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 G.gallus:48

H2XLG0              	100.00%		Q5SDR3              	100.00%
                    	       		F1NNJ5              	13.29%
Bootstrap support for H2XLG0 as seed ortholog is 95%.
Bootstrap support for Q5SDR3 as seed ortholog is 94%.

Group of orthologs #3665. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 G.gallus:195

F6Q521              	100.00%		E1BZN6              	100.00%
Bootstrap support for F6Q521 as seed ortholog is 100%.
Bootstrap support for E1BZN6 as seed ortholog is 100%.

Group of orthologs #3666. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 G.gallus:195

F6QWU8              	100.00%		F1N9Z8              	100.00%
Bootstrap support for F6QWU8 as seed ortholog is 100%.
Bootstrap support for F1N9Z8 as seed ortholog is 100%.

Group of orthologs #3667. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 G.gallus:195

F7AF59              	100.00%		E1BYR2              	100.00%
Bootstrap support for F7AF59 as seed ortholog is 100%.
Bootstrap support for E1BYR2 as seed ortholog is 100%.

Group of orthologs #3668. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 G.gallus:195

F6U3K8              	100.00%		F1NM25              	100.00%
Bootstrap support for F6U3K8 as seed ortholog is 100%.
Bootstrap support for F1NM25 as seed ortholog is 100%.

Group of orthologs #3669. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 G.gallus:195

F6RQ34              	100.00%		F1P310              	100.00%
Bootstrap support for F6RQ34 as seed ortholog is 100%.
Bootstrap support for F1P310 as seed ortholog is 100%.

Group of orthologs #3670. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:195

F6V3K9              	100.00%		F1NRT5              	100.00%
Bootstrap support for F6V3K9 as seed ortholog is 96%.
Bootstrap support for F1NRT5 as seed ortholog is 100%.

Group of orthologs #3671. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 G.gallus:195

F6PXS4              	100.00%		Q5ZL13              	100.00%
Bootstrap support for F6PXS4 as seed ortholog is 100%.
Bootstrap support for Q5ZL13 as seed ortholog is 100%.

Group of orthologs #3672. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 G.gallus:106

F7BHB8              	100.00%		F1NH43              	100.00%
Bootstrap support for F7BHB8 as seed ortholog is 100%.
Bootstrap support for F1NH43 as seed ortholog is 99%.

Group of orthologs #3673. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 G.gallus:130

H2XSQ8              	100.00%		E1C8F7              	100.00%
Bootstrap support for H2XSQ8 as seed ortholog is 100%.
Bootstrap support for E1C8F7 as seed ortholog is 100%.

Group of orthologs #3674. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 G.gallus:195

H2XM38              	100.00%		F1NGT7              	100.00%
Bootstrap support for H2XM38 as seed ortholog is 100%.
Bootstrap support for F1NGT7 as seed ortholog is 100%.

Group of orthologs #3675. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 G.gallus:195

F6Z277              	100.00%		Q9YGV8              	100.00%
Bootstrap support for F6Z277 as seed ortholog is 100%.
Bootstrap support for Q9YGV8 as seed ortholog is 100%.

Group of orthologs #3676. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 G.gallus:125

F7A8Z2              	100.00%		F1NXC0              	100.00%
F6Y1V1              	33.03%		F1NXY4              	64.79%
Bootstrap support for F7A8Z2 as seed ortholog is 78%.
Bootstrap support for F1NXC0 as seed ortholog is 99%.

Group of orthologs #3677. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 G.gallus:194

H2Y2Z2              	100.00%		F1NBZ8              	100.00%
F6YF07              	55.01%		P0DJJ2              	22.83%
Bootstrap support for H2Y2Z2 as seed ortholog is 100%.
Bootstrap support for F1NBZ8 as seed ortholog is 100%.

Group of orthologs #3678. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 G.gallus:194

F6WJM1              	100.00%		P46936              	100.00%
                    	       		F1NA37              	14.83%
Bootstrap support for F6WJM1 as seed ortholog is 100%.
Bootstrap support for P46936 as seed ortholog is 100%.

Group of orthologs #3679. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 G.gallus:194

F6W7J0              	100.00%		F1NBP1              	100.00%
Bootstrap support for F6W7J0 as seed ortholog is 100%.
Bootstrap support for F1NBP1 as seed ortholog is 100%.

Group of orthologs #3680. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 G.gallus:194

H2XM97              	100.00%		E1C3U1              	100.00%
Bootstrap support for H2XM97 as seed ortholog is 100%.
Bootstrap support for E1C3U1 as seed ortholog is 100%.

Group of orthologs #3681. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 G.gallus:194

F6Q599              	100.00%		Q5ZHQ6              	100.00%
Bootstrap support for F6Q599 as seed ortholog is 100%.
Bootstrap support for Q5ZHQ6 as seed ortholog is 100%.

Group of orthologs #3682. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 G.gallus:194

F6R7Q8              	100.00%		Q5XLA5              	100.00%
Bootstrap support for F6R7Q8 as seed ortholog is 100%.
Bootstrap support for Q5XLA5 as seed ortholog is 100%.

Group of orthologs #3683. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 G.gallus:194

F6ZK14              	100.00%		F1NPB5              	100.00%
Bootstrap support for F6ZK14 as seed ortholog is 100%.
Bootstrap support for F1NPB5 as seed ortholog is 100%.

Group of orthologs #3684. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 G.gallus:194

F6VKK3              	100.00%		Q5ZL55              	100.00%
Bootstrap support for F6VKK3 as seed ortholog is 100%.
Bootstrap support for Q5ZL55 as seed ortholog is 100%.

Group of orthologs #3685. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 G.gallus:42

F7A1W8              	100.00%		F1P3T4              	100.00%
Bootstrap support for F7A1W8 as seed ortholog is 100%.
Bootstrap support for F1P3T4 as seed ortholog is 94%.

Group of orthologs #3686. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 G.gallus:39

F6PZH8              	100.00%		P36381              	100.00%
                    	       		P29415              	22.82%
                    	       		P18860              	20.03%
                    	       		E1BZR3              	17.57%
                    	       		F1NJ17              	16.26%
                    	       		P14154              	12.15%
                    	       		O93533              	8.54%
                    	       		E1C2J9              	5.58%
Bootstrap support for F6PZH8 as seed ortholog is 59%.
Alternative seed ortholog is H2Y245 (15 bits away from this cluster)
Bootstrap support for P36381 as seed ortholog is 93%.

Group of orthologs #3687. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 G.gallus:84

F6R955              	100.00%		P02604              	100.00%
                    	       		F1P5V6              	28.57%
                    	       		F1NJ37              	25.40%
                    	       		P02607              	18.52%
Bootstrap support for F6R955 as seed ortholog is 89%.
Bootstrap support for P02604 as seed ortholog is 99%.

Group of orthologs #3688. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 G.gallus:82

F6QPQ3              	100.00%		F1P1C2              	100.00%
Bootstrap support for F6QPQ3 as seed ortholog is 100%.
Bootstrap support for F1P1C2 as seed ortholog is 99%.

Group of orthologs #3689. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 G.gallus:193

H2XRK7              	100.00%		E1BSW4              	100.00%
Bootstrap support for H2XRK7 as seed ortholog is 99%.
Bootstrap support for E1BSW4 as seed ortholog is 100%.

Group of orthologs #3690. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 G.gallus:193

F7AAL8              	100.00%		F1NLP1              	100.00%
Bootstrap support for F7AAL8 as seed ortholog is 100%.
Bootstrap support for F1NLP1 as seed ortholog is 100%.

Group of orthologs #3691. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 G.gallus:193

F6W7Q3              	100.00%		F1P4V6              	100.00%
Bootstrap support for F6W7Q3 as seed ortholog is 100%.
Bootstrap support for F1P4V6 as seed ortholog is 100%.

Group of orthologs #3692. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 G.gallus:193

H2XV14              	100.00%		E1C865              	100.00%
Bootstrap support for H2XV14 as seed ortholog is 100%.
Bootstrap support for E1C865 as seed ortholog is 100%.

Group of orthologs #3693. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 G.gallus:193

Q8HIN6              	100.00%		P18944              	100.00%
Bootstrap support for Q8HIN6 as seed ortholog is 100%.
Bootstrap support for P18944 as seed ortholog is 100%.

Group of orthologs #3694. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 G.gallus:193

I6L2C8              	100.00%		Q5ZL43              	100.00%
Bootstrap support for I6L2C8 as seed ortholog is 100%.
Bootstrap support for Q5ZL43 as seed ortholog is 100%.

Group of orthologs #3695. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 G.gallus:192

F6ZUP0              	100.00%		F1NGC0              	100.00%
                    	       		E1BX03              	42.28%
                    	       		Q8UVD9              	32.89%
Bootstrap support for F6ZUP0 as seed ortholog is 100%.
Bootstrap support for F1NGC0 as seed ortholog is 100%.

Group of orthologs #3696. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 G.gallus:31

F6PH17              	100.00%		Q5ZK57              	100.00%
                    	       		F1NU54              	11.84%
                    	       		F1NIE6              	10.88%
Bootstrap support for F6PH17 as seed ortholog is 99%.
Bootstrap support for Q5ZK57 as seed ortholog is 83%.

Group of orthologs #3697. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 G.gallus:105

H2XS14              	100.00%		E1BQ63              	100.00%
Bootstrap support for H2XS14 as seed ortholog is 99%.
Bootstrap support for E1BQ63 as seed ortholog is 99%.

Group of orthologs #3698. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 G.gallus:192

F6SJ18              	100.00%		Q5ZI16              	100.00%
Bootstrap support for F6SJ18 as seed ortholog is 100%.
Bootstrap support for Q5ZI16 as seed ortholog is 100%.

Group of orthologs #3699. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 G.gallus:192

H2Y0K8              	100.00%		F1NHN4              	100.00%
Bootstrap support for H2Y0K8 as seed ortholog is 100%.
Bootstrap support for F1NHN4 as seed ortholog is 100%.

Group of orthologs #3700. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 G.gallus:115

F6Q1C2              	100.00%		Q98892              	100.00%
                    	       		F1N9Q5              	56.68%
                    	       		Q98919              	36.23%
                    	       		E1BSB7              	36.23%
                    	       		Q9W6V2              	25.30%
Bootstrap support for F6Q1C2 as seed ortholog is 99%.
Bootstrap support for Q98892 as seed ortholog is 99%.

Group of orthologs #3701. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 G.gallus:1

F7AJY7              	100.00%		E1C8L4              	100.00%
                    	       		F1NY88              	15.92%
                    	       		F1NLT4              	15.92%
                    	       		F1N9M8              	9.58%
Bootstrap support for F7AJY7 as seed ortholog is 74%.
Alternative seed ortholog is F6SJ02 (22 bits away from this cluster)
Bootstrap support for E1C8L4 as seed ortholog is 52%.
Alternative seed ortholog is H9KZD3 (1 bits away from this cluster)

Group of orthologs #3702. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 G.gallus:191

F6RST4              	100.00%		F1N8H4              	100.00%
                    	       		E1BTY8              	8.08%
Bootstrap support for F6RST4 as seed ortholog is 98%.
Bootstrap support for F1N8H4 as seed ortholog is 100%.

Group of orthologs #3703. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 G.gallus:191

F6V6C3              	100.00%		E1C990              	100.00%
                    	       		F1NLL6              	7.61%
Bootstrap support for F6V6C3 as seed ortholog is 77%.
Bootstrap support for E1C990 as seed ortholog is 100%.

Group of orthologs #3704. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 G.gallus:191

H2Y1H2              	100.00%		E1BV91              	100.00%
                    	       		Q92179              	15.76%
Bootstrap support for H2Y1H2 as seed ortholog is 87%.
Bootstrap support for E1BV91 as seed ortholog is 100%.

Group of orthologs #3705. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 G.gallus:191

F6T485              	100.00%		E1BWV0              	100.00%
Bootstrap support for F6T485 as seed ortholog is 100%.
Bootstrap support for E1BWV0 as seed ortholog is 100%.

Group of orthologs #3706. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 G.gallus:191

F6W3C3              	100.00%		E1BRQ5              	100.00%
Bootstrap support for F6W3C3 as seed ortholog is 100%.
Bootstrap support for E1BRQ5 as seed ortholog is 100%.

Group of orthologs #3707. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 G.gallus:116

F6VRL4              	100.00%		E1C7B6              	100.00%
Bootstrap support for F6VRL4 as seed ortholog is 99%.
Bootstrap support for E1C7B6 as seed ortholog is 99%.

Group of orthologs #3708. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 G.gallus:191

F6QPH0              	100.00%		F1NN23              	100.00%
Bootstrap support for F6QPH0 as seed ortholog is 100%.
Bootstrap support for F1NN23 as seed ortholog is 100%.

Group of orthologs #3709. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 G.gallus:191

F6QAE6              	100.00%		F1NQ58              	100.00%
Bootstrap support for F6QAE6 as seed ortholog is 100%.
Bootstrap support for F1NQ58 as seed ortholog is 100%.

Group of orthologs #3710. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 G.gallus:191

H2XQF1              	100.00%		E1BRP3              	100.00%
Bootstrap support for H2XQF1 as seed ortholog is 100%.
Bootstrap support for E1BRP3 as seed ortholog is 100%.

Group of orthologs #3711. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 G.gallus:191

F6ZLL7              	100.00%		E1C8V7              	100.00%
Bootstrap support for F6ZLL7 as seed ortholog is 100%.
Bootstrap support for E1C8V7 as seed ortholog is 100%.

Group of orthologs #3712. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 G.gallus:191

H2XN33              	100.00%		F1NHR6              	100.00%
Bootstrap support for H2XN33 as seed ortholog is 100%.
Bootstrap support for F1NHR6 as seed ortholog is 100%.

Group of orthologs #3713. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 G.gallus:191

F6V0W8              	100.00%		Q5F3J5              	100.00%
Bootstrap support for F6V0W8 as seed ortholog is 97%.
Bootstrap support for Q5F3J5 as seed ortholog is 100%.

Group of orthologs #3714. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 G.gallus:191

Q4H2R5              	100.00%		E1C4X4              	100.00%
Bootstrap support for Q4H2R5 as seed ortholog is 100%.
Bootstrap support for E1C4X4 as seed ortholog is 100%.

Group of orthologs #3715. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 G.gallus:191

F6Z897              	100.00%		P67883              	100.00%
Bootstrap support for F6Z897 as seed ortholog is 100%.
Bootstrap support for P67883 as seed ortholog is 100%.

Group of orthologs #3716. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 G.gallus:191

H2Y013              	100.00%		Q5ZJ39              	100.00%
Bootstrap support for H2Y013 as seed ortholog is 100%.
Bootstrap support for Q5ZJ39 as seed ortholog is 100%.

Group of orthologs #3717. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 G.gallus:56

F6TFC4              	100.00%		E1BT96              	100.00%
                    	       		P28675              	12.95%
                    	       		E1BQ80              	8.22%
Bootstrap support for F6TFC4 as seed ortholog is 95%.
Bootstrap support for E1BT96 as seed ortholog is 90%.

Group of orthologs #3718. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 G.gallus:190

H2Y3K2              	100.00%		E1BTZ3              	100.00%
                    	       		Q5ZI07              	100.00%
                    	       		F1NA62              	33.33%
Bootstrap support for H2Y3K2 as seed ortholog is 100%.
Bootstrap support for E1BTZ3 as seed ortholog is 100%.
Bootstrap support for Q5ZI07 as seed ortholog is 100%.

Group of orthologs #3719. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:190

H2XMY6              	100.00%		F1NU66              	100.00%
                    	       		Q90752              	95.62%
                    	       		Q90751              	40.38%
Bootstrap support for H2XMY6 as seed ortholog is 93%.
Bootstrap support for F1NU66 as seed ortholog is 100%.

Group of orthologs #3720. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 G.gallus:190

F6YFF3              	100.00%		E1C1F9              	100.00%
F7AV41              	10.82%		
Bootstrap support for F6YFF3 as seed ortholog is 100%.
Bootstrap support for E1C1F9 as seed ortholog is 100%.

Group of orthologs #3721. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 G.gallus:190

F6QEH8              	100.00%		F1N9T5              	100.00%
Bootstrap support for F6QEH8 as seed ortholog is 100%.
Bootstrap support for F1N9T5 as seed ortholog is 100%.

Group of orthologs #3722. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 G.gallus:190

F6U3G5              	100.00%		F1NMW5              	100.00%
Bootstrap support for F6U3G5 as seed ortholog is 100%.
Bootstrap support for F1NMW5 as seed ortholog is 100%.

Group of orthologs #3723. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 G.gallus:190

F6RN78              	100.00%		F1P018              	100.00%
Bootstrap support for F6RN78 as seed ortholog is 99%.
Bootstrap support for F1P018 as seed ortholog is 100%.

Group of orthologs #3724. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 G.gallus:190

F7BK44              	100.00%		E1C4N0              	100.00%
Bootstrap support for F7BK44 as seed ortholog is 100%.
Bootstrap support for E1C4N0 as seed ortholog is 100%.

Group of orthologs #3725. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 G.gallus:190

F6YUN5              	100.00%		F1NSA3              	100.00%
Bootstrap support for F6YUN5 as seed ortholog is 100%.
Bootstrap support for F1NSA3 as seed ortholog is 100%.

Group of orthologs #3726. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 G.gallus:190

H2XS17              	100.00%		F1NMF9              	100.00%
Bootstrap support for H2XS17 as seed ortholog is 100%.
Bootstrap support for F1NMF9 as seed ortholog is 100%.

Group of orthologs #3727. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 G.gallus:190

Q4H3L6              	100.00%		H9KYV9              	100.00%
Bootstrap support for Q4H3L6 as seed ortholog is 100%.
Bootstrap support for H9KYV9 as seed ortholog is 100%.

Group of orthologs #3728. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 G.gallus:190

H2XWH6              	100.00%		Q5ZKY0              	100.00%
Bootstrap support for H2XWH6 as seed ortholog is 100%.
Bootstrap support for Q5ZKY0 as seed ortholog is 100%.

Group of orthologs #3729. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 G.gallus:190

H2Y1A0              	100.00%		Q5ZML0              	100.00%
Bootstrap support for H2Y1A0 as seed ortholog is 100%.
Bootstrap support for Q5ZML0 as seed ortholog is 100%.

Group of orthologs #3730. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 G.gallus:97

F6Y6P2              	100.00%		E1BV84              	100.00%
                    	       		Q90607              	7.29%
                    	       		O42237              	6.67%
                    	       		Q90663              	6.06%
Bootstrap support for F6Y6P2 as seed ortholog is 56%.
Alternative seed ortholog is F6ZX31 (5 bits away from this cluster)
Bootstrap support for E1BV84 as seed ortholog is 96%.

Group of orthologs #3731. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:189

H2XWB4              	100.00%		F1P5G8              	100.00%
                    	       		F1P3U8              	21.05%
Bootstrap support for H2XWB4 as seed ortholog is 100%.
Bootstrap support for F1P5G8 as seed ortholog is 100%.

Group of orthologs #3732. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:108

F6TVM0              	100.00%		E1C0V4              	100.00%
Bootstrap support for F6TVM0 as seed ortholog is 100%.
Bootstrap support for E1C0V4 as seed ortholog is 100%.

Group of orthologs #3733. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:189

F6VLR9              	100.00%		E1BXC5              	100.00%
Bootstrap support for F6VLR9 as seed ortholog is 100%.
Bootstrap support for E1BXC5 as seed ortholog is 100%.

Group of orthologs #3734. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:189

F6QIF4              	100.00%		F1NMF0              	100.00%
Bootstrap support for F6QIF4 as seed ortholog is 100%.
Bootstrap support for F1NMF0 as seed ortholog is 100%.

Group of orthologs #3735. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:112

F6ZTN4              	100.00%		E1BW90              	100.00%
Bootstrap support for F6ZTN4 as seed ortholog is 100%.
Bootstrap support for E1BW90 as seed ortholog is 100%.

Group of orthologs #3736. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:189

F6SL18              	100.00%		F1P2U9              	100.00%
Bootstrap support for F6SL18 as seed ortholog is 100%.
Bootstrap support for F1P2U9 as seed ortholog is 100%.

Group of orthologs #3737. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:189

F7AFU8              	100.00%		F1P0K1              	100.00%
Bootstrap support for F7AFU8 as seed ortholog is 100%.
Bootstrap support for F1P0K1 as seed ortholog is 100%.

Group of orthologs #3738. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:189

H2XKM0              	100.00%		F1NTQ8              	100.00%
Bootstrap support for H2XKM0 as seed ortholog is 100%.
Bootstrap support for F1NTQ8 as seed ortholog is 100%.

Group of orthologs #3739. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:189

H2XUX6              	100.00%		F1NZI0              	100.00%
Bootstrap support for H2XUX6 as seed ortholog is 100%.
Bootstrap support for F1NZI0 as seed ortholog is 100%.

Group of orthologs #3740. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:189

H2XME2              	100.00%		Q5ZJA2              	100.00%
Bootstrap support for H2XME2 as seed ortholog is 100%.
Bootstrap support for Q5ZJA2 as seed ortholog is 100%.

Group of orthologs #3741. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 G.gallus:189

Q4H2R3              	100.00%		Q90718              	100.00%
Bootstrap support for Q4H2R3 as seed ortholog is 100%.
Bootstrap support for Q90718 as seed ortholog is 100%.

Group of orthologs #3742. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 G.gallus:188

F6QRZ2              	100.00%		E1BZU5              	100.00%
                    	       		E1BV82              	8.23%
Bootstrap support for F6QRZ2 as seed ortholog is 100%.
Bootstrap support for E1BZU5 as seed ortholog is 100%.

Group of orthologs #3743. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:33

H2XJV4              	100.00%		F1NAT8              	100.00%
                    	       		F1NHD7              	11.50%
Bootstrap support for H2XJV4 as seed ortholog is 97%.
Bootstrap support for F1NAT8 as seed ortholog is 80%.

Group of orthologs #3744. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 G.gallus:188

F6VRV5              	100.00%		P02642              	100.00%
                    	       		P12620              	26.75%
Bootstrap support for F6VRV5 as seed ortholog is 100%.
Bootstrap support for P02642 as seed ortholog is 100%.

Group of orthologs #3745. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 G.gallus:188

F7AP11              	100.00%		E1BRL0              	100.00%
Bootstrap support for F7AP11 as seed ortholog is 100%.
Bootstrap support for E1BRL0 as seed ortholog is 100%.

Group of orthologs #3746. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 G.gallus:188

F6SBJ2              	100.00%		Q5ZL03              	100.00%
Bootstrap support for F6SBJ2 as seed ortholog is 96%.
Bootstrap support for Q5ZL03 as seed ortholog is 100%.

Group of orthologs #3747. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 G.gallus:188

F6VFA0              	100.00%		Q98TF7              	100.00%
Bootstrap support for F6VFA0 as seed ortholog is 100%.
Bootstrap support for Q98TF7 as seed ortholog is 100%.

Group of orthologs #3748. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 G.gallus:188

F7BK02              	100.00%		F1P3Y8              	100.00%
Bootstrap support for F7BK02 as seed ortholog is 100%.
Bootstrap support for F1P3Y8 as seed ortholog is 100%.

Group of orthologs #3749. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 G.gallus:115

F6Y4J7              	100.00%		Q7ZT11              	100.00%
Bootstrap support for F6Y4J7 as seed ortholog is 100%.
Bootstrap support for Q7ZT11 as seed ortholog is 100%.

Group of orthologs #3750. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 G.gallus:188

H2XUW4              	100.00%		F1NRU8              	100.00%
Bootstrap support for H2XUW4 as seed ortholog is 99%.
Bootstrap support for F1NRU8 as seed ortholog is 100%.

Group of orthologs #3751. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 G.gallus:188

H2XQZ0              	100.00%		H9L0K0              	100.00%
Bootstrap support for H2XQZ0 as seed ortholog is 100%.
Bootstrap support for H9L0K0 as seed ortholog is 100%.

Group of orthologs #3752. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 G.gallus:188

Q4H329              	100.00%		P25207              	100.00%
Bootstrap support for Q4H329 as seed ortholog is 100%.
Bootstrap support for P25207 as seed ortholog is 100%.

Group of orthologs #3753. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 G.gallus:188

H2Y2U3              	100.00%		Q5ZKA4              	100.00%
Bootstrap support for H2Y2U3 as seed ortholog is 100%.
Bootstrap support for Q5ZKA4 as seed ortholog is 100%.

Group of orthologs #3754. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 G.gallus:187

H2XVL1              	100.00%		E1C4N6              	100.00%
                    	       		F1NBY2              	11.04%
Bootstrap support for H2XVL1 as seed ortholog is 100%.
Bootstrap support for E1C4N6 as seed ortholog is 100%.

Group of orthologs #3755. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 G.gallus:187

F6Z6E4              	100.00%		E1BYU6              	100.00%
Bootstrap support for F6Z6E4 as seed ortholog is 100%.
Bootstrap support for E1BYU6 as seed ortholog is 100%.

Group of orthologs #3756. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 G.gallus:187

H2XJU8              	100.00%		E1C285              	100.00%
Bootstrap support for H2XJU8 as seed ortholog is 100%.
Bootstrap support for E1C285 as seed ortholog is 100%.

Group of orthologs #3757. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 G.gallus:187

F6Z5D4              	100.00%		F1NGR1              	100.00%
Bootstrap support for F6Z5D4 as seed ortholog is 100%.
Bootstrap support for F1NGR1 as seed ortholog is 100%.

Group of orthologs #3758. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:64

F7B6U2              	100.00%		F1NTK5              	100.00%
Bootstrap support for F7B6U2 as seed ortholog is 99%.
Bootstrap support for F1NTK5 as seed ortholog is 98%.

Group of orthologs #3759. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 G.gallus:186

F6SQ23              	100.00%		F1NNG2              	100.00%
F6VKX9              	34.19%		E1BSW1              	31.89%
Bootstrap support for F6SQ23 as seed ortholog is 93%.
Bootstrap support for F1NNG2 as seed ortholog is 100%.

Group of orthologs #3760. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 G.gallus:186

F6Y6Z0              	100.00%		F1NT93              	100.00%
                    	       		E1C2F4              	33.53%
                    	       		E1BQD1              	30.92%
Bootstrap support for F6Y6Z0 as seed ortholog is 100%.
Bootstrap support for F1NT93 as seed ortholog is 100%.

Group of orthologs #3761. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 G.gallus:186

F6XKQ6              	100.00%		E1BRD9              	100.00%
F6YRA9              	100.00%		
Bootstrap support for F6XKQ6 as seed ortholog is 100%.
Bootstrap support for F6YRA9 as seed ortholog is 100%.
Bootstrap support for E1BRD9 as seed ortholog is 100%.

Group of orthologs #3762. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 G.gallus:91

F6W4Z8              	100.00%		E1C6D9              	100.00%
                    	       		F1NR96              	5.91%
Bootstrap support for F6W4Z8 as seed ortholog is 100%.
Bootstrap support for E1C6D9 as seed ortholog is 99%.

Group of orthologs #3763. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 G.gallus:186

F6QAF5              	100.00%		F1NY60              	100.00%
                    	       		E1C3M9              	43.87%
Bootstrap support for F6QAF5 as seed ortholog is 99%.
Bootstrap support for F1NY60 as seed ortholog is 100%.

Group of orthologs #3764. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 G.gallus:54

F7AJG5              	100.00%		F1NV44              	100.00%
                    	       		E1BQL7              	6.09%
Bootstrap support for F7AJG5 as seed ortholog is 63%.
Alternative seed ortholog is F6QHU8 (14 bits away from this cluster)
Bootstrap support for F1NV44 as seed ortholog is 95%.

Group of orthologs #3765. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 G.gallus:74

F6QP05              	100.00%		F1NB46              	100.00%
Bootstrap support for F6QP05 as seed ortholog is 100%.
Bootstrap support for F1NB46 as seed ortholog is 97%.

Group of orthologs #3766. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 G.gallus:186

F6RBI7              	100.00%		F1NAG3              	100.00%
Bootstrap support for F6RBI7 as seed ortholog is 88%.
Bootstrap support for F1NAG3 as seed ortholog is 100%.

Group of orthologs #3767. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 G.gallus:113

F6T5I8              	100.00%		F1NNU5              	100.00%
Bootstrap support for F6T5I8 as seed ortholog is 99%.
Bootstrap support for F1NNU5 as seed ortholog is 100%.

Group of orthologs #3768. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 G.gallus:186

F6WII1              	100.00%		F1NTD4              	100.00%
Bootstrap support for F6WII1 as seed ortholog is 100%.
Bootstrap support for F1NTD4 as seed ortholog is 100%.

Group of orthologs #3769. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 G.gallus:186

H2XML4              	100.00%		F1N9G6              	100.00%
Bootstrap support for H2XML4 as seed ortholog is 100%.
Bootstrap support for F1N9G6 as seed ortholog is 100%.

Group of orthologs #3770. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 G.gallus:186

F7BHN2              	100.00%		F1NU36              	100.00%
Bootstrap support for F7BHN2 as seed ortholog is 100%.
Bootstrap support for F1NU36 as seed ortholog is 100%.

Group of orthologs #3771. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 G.gallus:186

H2XXZ1              	100.00%		F1NHW3              	100.00%
Bootstrap support for H2XXZ1 as seed ortholog is 100%.
Bootstrap support for F1NHW3 as seed ortholog is 100%.

Group of orthologs #3772. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 G.gallus:37

Q2PEE2              	100.00%		F1P561              	100.00%
Bootstrap support for Q2PEE2 as seed ortholog is 100%.
Bootstrap support for F1P561 as seed ortholog is 98%.

Group of orthologs #3773. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 G.gallus:36

F6ULU6              	100.00%		E1C5A0              	100.00%
H2XZ40              	32.42%		E1BZL4              	38.67%
F7AP79              	15.25%		E1C9I4              	35.35%
Bootstrap support for F6ULU6 as seed ortholog is 100%.
Bootstrap support for E1C5A0 as seed ortholog is 82%.

Group of orthologs #3774. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 G.gallus:114

F6XVV4              	100.00%		F1NWP9              	100.00%
                    	       		Q9W6A1              	41.56%
                    	       		Q9IAI5              	30.84%
Bootstrap support for F6XVV4 as seed ortholog is 100%.
Bootstrap support for F1NWP9 as seed ortholog is 100%.

Group of orthologs #3775. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 G.gallus:53

F6WHA2              	100.00%		E1C857              	100.00%
                    	       		F1NUH7              	26.46%
Bootstrap support for F6WHA2 as seed ortholog is 99%.
Bootstrap support for E1C857 as seed ortholog is 96%.

Group of orthologs #3776. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 G.gallus:185

F7A4X9              	100.00%		F1NFS1              	100.00%
                    	       		E1BXL2              	9.50%
Bootstrap support for F7A4X9 as seed ortholog is 100%.
Bootstrap support for F1NFS1 as seed ortholog is 100%.

Group of orthologs #3777. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 G.gallus:110

F6RBZ6              	100.00%		Q9W734              	100.00%
                    	       		E1C8F8              	69.35%
Bootstrap support for F6RBZ6 as seed ortholog is 93%.
Bootstrap support for Q9W734 as seed ortholog is 96%.

Group of orthologs #3778. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 G.gallus:145

F6YX22              	100.00%		F1P121              	100.00%
                    	       		E1C4K9              	39.27%
Bootstrap support for F6YX22 as seed ortholog is 100%.
Bootstrap support for F1P121 as seed ortholog is 100%.

Group of orthologs #3779. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 G.gallus:185

F6X986              	100.00%		E1C8Y9              	100.00%
Bootstrap support for F6X986 as seed ortholog is 98%.
Bootstrap support for E1C8Y9 as seed ortholog is 100%.

Group of orthologs #3780. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 G.gallus:185

F6X2L1              	100.00%		F1NB38              	100.00%
Bootstrap support for F6X2L1 as seed ortholog is 99%.
Bootstrap support for F1NB38 as seed ortholog is 100%.

Group of orthologs #3781. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:99

F6YV26              	100.00%		Q8UWB9              	100.00%
Bootstrap support for F6YV26 as seed ortholog is 98%.
Bootstrap support for Q8UWB9 as seed ortholog is 99%.

Group of orthologs #3782. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 G.gallus:127

H2XY30              	100.00%		F1P4F6              	100.00%
Bootstrap support for H2XY30 as seed ortholog is 100%.
Bootstrap support for F1P4F6 as seed ortholog is 100%.

Group of orthologs #3783. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 G.gallus:97

H2Y0A0              	100.00%		P80566              	100.00%
Bootstrap support for H2Y0A0 as seed ortholog is 100%.
Bootstrap support for P80566 as seed ortholog is 99%.

Group of orthologs #3784. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 G.gallus:184

F6WT98              	100.00%		F1NYW9              	100.00%
                    	       		O93345              	36.66%
                    	       		E1BYU0              	21.38%
Bootstrap support for F6WT98 as seed ortholog is 100%.
Bootstrap support for F1NYW9 as seed ortholog is 100%.

Group of orthologs #3785. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 G.gallus:184

H2Y2V5              	100.00%		F1NS19              	100.00%
                    	       		F1P2Z1              	22.39%
                    	       		F1NGX5              	9.44%
Bootstrap support for H2Y2V5 as seed ortholog is 100%.
Bootstrap support for F1NS19 as seed ortholog is 100%.

Group of orthologs #3786. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 G.gallus:184

H2XR06              	100.00%		E1C211              	100.00%
                    	       		F1NPE6              	12.77%
Bootstrap support for H2XR06 as seed ortholog is 99%.
Bootstrap support for E1C211 as seed ortholog is 100%.

Group of orthologs #3787. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 G.gallus:15

F7B7S8              	100.00%		F1NZ64              	100.00%
F6SYR3              	11.85%		
Bootstrap support for F7B7S8 as seed ortholog is 100%.
Bootstrap support for F1NZ64 as seed ortholog is 62%.
Alternative seed ortholog is F1NPX7 (15 bits away from this cluster)

Group of orthologs #3788. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 G.gallus:184

F6S4Y6              	100.00%		F1NCD7              	100.00%
Bootstrap support for F6S4Y6 as seed ortholog is 100%.
Bootstrap support for F1NCD7 as seed ortholog is 100%.

Group of orthologs #3789. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 G.gallus:184

H2Y0Y0              	100.00%		E1C4G8              	100.00%
Bootstrap support for H2Y0Y0 as seed ortholog is 100%.
Bootstrap support for E1C4G8 as seed ortholog is 100%.

Group of orthologs #3790. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 G.gallus:46

F6YSA0              	100.00%		P09860              	100.00%
Bootstrap support for F6YSA0 as seed ortholog is 91%.
Bootstrap support for P09860 as seed ortholog is 98%.

Group of orthologs #3791. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 G.gallus:184

F6W6Z3              	100.00%		Q9PV94              	100.00%
Bootstrap support for F6W6Z3 as seed ortholog is 100%.
Bootstrap support for Q9PV94 as seed ortholog is 100%.

Group of orthologs #3792. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 G.gallus:183

H2XYK8              	100.00%		E1BYK0              	100.00%
                    	       		H9KZH4              	75.81%
Bootstrap support for H2XYK8 as seed ortholog is 100%.
Bootstrap support for E1BYK0 as seed ortholog is 100%.

Group of orthologs #3793. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 G.gallus:14

F6X5Z3              	100.00%		Q679P3              	100.00%
                    	       		F1P5H0              	26.72%
Bootstrap support for F6X5Z3 as seed ortholog is 100%.
Bootstrap support for Q679P3 as seed ortholog is 63%.
Alternative seed ortholog is F1NIJ0 (14 bits away from this cluster)

Group of orthologs #3794. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 G.gallus:32

F6TTX9              	100.00%		E1BV71              	100.00%
Bootstrap support for F6TTX9 as seed ortholog is 100%.
Bootstrap support for E1BV71 as seed ortholog is 82%.

Group of orthologs #3795. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 G.gallus:183

F6TN99              	100.00%		E1C2N9              	100.00%
Bootstrap support for F6TN99 as seed ortholog is 100%.
Bootstrap support for E1C2N9 as seed ortholog is 100%.

Group of orthologs #3796. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 G.gallus:94

F6QR63              	100.00%		F1NBN8              	100.00%
Bootstrap support for F6QR63 as seed ortholog is 100%.
Bootstrap support for F1NBN8 as seed ortholog is 99%.

Group of orthologs #3797. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 G.gallus:183

F6R4L0              	100.00%		F1NUQ1              	100.00%
Bootstrap support for F6R4L0 as seed ortholog is 100%.
Bootstrap support for F1NUQ1 as seed ortholog is 100%.

Group of orthologs #3798. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 G.gallus:183

F6WEG7              	100.00%		F1NW20              	100.00%
Bootstrap support for F6WEG7 as seed ortholog is 100%.
Bootstrap support for F1NW20 as seed ortholog is 100%.

Group of orthologs #3799. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 G.gallus:183

H2XSM6              	100.00%		E1C4L5              	100.00%
Bootstrap support for H2XSM6 as seed ortholog is 100%.
Bootstrap support for E1C4L5 as seed ortholog is 100%.

Group of orthologs #3800. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 G.gallus:183

H2XXH2              	100.00%		E1C4Z2              	100.00%
Bootstrap support for H2XXH2 as seed ortholog is 100%.
Bootstrap support for E1C4Z2 as seed ortholog is 100%.

Group of orthologs #3801. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 G.gallus:183

F6TMY9              	100.00%		Q5ZJK1              	100.00%
Bootstrap support for F6TMY9 as seed ortholog is 100%.
Bootstrap support for Q5ZJK1 as seed ortholog is 100%.

Group of orthologs #3802. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 G.gallus:5

Q2PEE1              	100.00%		F1NRI4              	100.00%
Bootstrap support for Q2PEE1 as seed ortholog is 100%.
Bootstrap support for F1NRI4 as seed ortholog is 71%.
Alternative seed ortholog is F1N8L5 (5 bits away from this cluster)

Group of orthologs #3803. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 G.gallus:182

F6RAS4              	100.00%		Q5ZJH7              	100.00%
                    	       		E1BYE2              	81.84%
Bootstrap support for F6RAS4 as seed ortholog is 100%.
Bootstrap support for Q5ZJH7 as seed ortholog is 100%.

Group of orthologs #3804. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 G.gallus:182

F6TJA4              	100.00%		P28687              	100.00%
                    	       		F1ND35              	46.67%
Bootstrap support for F6TJA4 as seed ortholog is 100%.
Bootstrap support for P28687 as seed ortholog is 100%.

Group of orthologs #3805. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 G.gallus:121

F6SQS1              	100.00%		E1C6V8              	100.00%
Bootstrap support for F6SQS1 as seed ortholog is 100%.
Bootstrap support for E1C6V8 as seed ortholog is 100%.

Group of orthologs #3806. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 G.gallus:182

F6TSS8              	100.00%		F1NUY3              	100.00%
Bootstrap support for F6TSS8 as seed ortholog is 100%.
Bootstrap support for F1NUY3 as seed ortholog is 100%.

Group of orthologs #3807. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 G.gallus:182

F6ZPT5              	100.00%		F1NEF9              	100.00%
Bootstrap support for F6ZPT5 as seed ortholog is 100%.
Bootstrap support for F1NEF9 as seed ortholog is 100%.

Group of orthologs #3808. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 G.gallus:182

H2XU85              	100.00%		E1C7E6              	100.00%
Bootstrap support for H2XU85 as seed ortholog is 88%.
Bootstrap support for E1C7E6 as seed ortholog is 100%.

Group of orthologs #3809. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 G.gallus:182

F6XGB5              	100.00%		Q5ZLD4              	100.00%
Bootstrap support for F6XGB5 as seed ortholog is 100%.
Bootstrap support for Q5ZLD4 as seed ortholog is 100%.

Group of orthologs #3810. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 G.gallus:182

H2Y1S1              	100.00%		F1NRM4              	100.00%
Bootstrap support for H2Y1S1 as seed ortholog is 100%.
Bootstrap support for F1NRM4 as seed ortholog is 100%.

Group of orthologs #3811. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 G.gallus:182

H2XQD7              	100.00%		Q90ZH5              	100.00%
Bootstrap support for H2XQD7 as seed ortholog is 100%.
Bootstrap support for Q90ZH5 as seed ortholog is 100%.

Group of orthologs #3812. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 G.gallus:68

F6XIJ2              	100.00%		F1NN71              	100.00%
Q869J2              	17.36%		F1P1J8              	21.66%
F6XIM3              	16.96%		
Bootstrap support for F6XIJ2 as seed ortholog is 99%.
Bootstrap support for F1NN71 as seed ortholog is 97%.

Group of orthologs #3813. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:181

H2XKX6              	100.00%		F1P015              	100.00%
                    	       		F1N8X1              	32.84%
                    	       		F1NZX2              	14.32%
Bootstrap support for H2XKX6 as seed ortholog is 100%.
Bootstrap support for F1P015 as seed ortholog is 100%.

Group of orthologs #3814. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 G.gallus:28

H2Y099              	100.00%		F1NSE5              	100.00%
H2Y3J7              	41.54%		
H2XNM8              	14.43%		
Bootstrap support for H2Y099 as seed ortholog is 60%.
Alternative seed ortholog is F6Q162 (10 bits away from this cluster)
Bootstrap support for F1NSE5 as seed ortholog is 79%.

Group of orthologs #3815. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:181

F6VSM2              	100.00%		Q5ZHV6              	100.00%
                    	       		F1NG73              	8.59%
Bootstrap support for F6VSM2 as seed ortholog is 100%.
Bootstrap support for Q5ZHV6 as seed ortholog is 100%.

Group of orthologs #3816. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:181

H2XTW7              	100.00%		Q5F3Z0              	100.00%
                    	       		H9L085              	16.09%
Bootstrap support for H2XTW7 as seed ortholog is 100%.
Bootstrap support for Q5F3Z0 as seed ortholog is 100%.

Group of orthologs #3817. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:181

F6QW72              	100.00%		E1BZS8              	100.00%
Bootstrap support for F6QW72 as seed ortholog is 100%.
Bootstrap support for E1BZS8 as seed ortholog is 100%.

Group of orthologs #3818. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:181

F6PWH7              	100.00%		F1NBQ0              	100.00%
Bootstrap support for F6PWH7 as seed ortholog is 100%.
Bootstrap support for F1NBQ0 as seed ortholog is 100%.

Group of orthologs #3819. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:85

F6PII0              	100.00%		F1NJN7              	100.00%
Bootstrap support for F6PII0 as seed ortholog is 100%.
Bootstrap support for F1NJN7 as seed ortholog is 99%.

Group of orthologs #3820. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:42

F6RQN0              	100.00%		F1NUC4              	100.00%
Bootstrap support for F6RQN0 as seed ortholog is 100%.
Bootstrap support for F1NUC4 as seed ortholog is 79%.

Group of orthologs #3821. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:119

F7B1C7              	100.00%		F1NG75              	100.00%
Bootstrap support for F7B1C7 as seed ortholog is 99%.
Bootstrap support for F1NG75 as seed ortholog is 100%.

Group of orthologs #3822. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 G.gallus:122

H2XZN8              	100.00%		E1BYP4              	100.00%
Bootstrap support for H2XZN8 as seed ortholog is 99%.
Bootstrap support for E1BYP4 as seed ortholog is 99%.

Group of orthologs #3823. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:126

F7B2Y0              	100.00%		F1NU23              	100.00%
Bootstrap support for F7B2Y0 as seed ortholog is 100%.
Bootstrap support for F1NU23 as seed ortholog is 99%.

Group of orthologs #3824. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:181

H2XMA9              	100.00%		F1NPF3              	100.00%
Bootstrap support for H2XMA9 as seed ortholog is 100%.
Bootstrap support for F1NPF3 as seed ortholog is 100%.

Group of orthologs #3825. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:181

F7AHS5              	100.00%		F1P572              	100.00%
Bootstrap support for F7AHS5 as seed ortholog is 100%.
Bootstrap support for F1P572 as seed ortholog is 100%.

Group of orthologs #3826. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:181

H2XQJ8              	100.00%		F1NSV1              	100.00%
Bootstrap support for H2XQJ8 as seed ortholog is 100%.
Bootstrap support for F1NSV1 as seed ortholog is 100%.

Group of orthologs #3827. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:181

F6WF92              	100.00%		Q98T89              	100.00%
Bootstrap support for F6WF92 as seed ortholog is 100%.
Bootstrap support for Q98T89 as seed ortholog is 100%.

Group of orthologs #3828. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 G.gallus:181

H2XUX5              	100.00%		F1NSV0              	100.00%
Bootstrap support for H2XUX5 as seed ortholog is 85%.
Bootstrap support for F1NSV0 as seed ortholog is 100%.

Group of orthologs #3829. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:181

H2Y1H3              	100.00%		F1NNZ6              	100.00%
Bootstrap support for H2Y1H3 as seed ortholog is 100%.
Bootstrap support for F1NNZ6 as seed ortholog is 100%.

Group of orthologs #3830. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:181

H2XVN7              	100.00%		H9L034              	100.00%
Bootstrap support for H2XVN7 as seed ortholog is 100%.
Bootstrap support for H9L034 as seed ortholog is 100%.

Group of orthologs #3831. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 G.gallus:181

H2XY72              	100.00%		Q5ZJE4              	100.00%
Bootstrap support for H2XY72 as seed ortholog is 100%.
Bootstrap support for Q5ZJE4 as seed ortholog is 100%.

Group of orthologs #3832. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 G.gallus:52

F7AZY1              	100.00%		F1P1P0              	100.00%
                    	       		P07630              	37.09%
                    	       		F1P1Q1              	30.28%
                    	       		E1BUE6              	16.20%
                    	       		F1N986              	8.92%
Bootstrap support for F7AZY1 as seed ortholog is 93%.
Bootstrap support for F1P1P0 as seed ortholog is 92%.

Group of orthologs #3833. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 G.gallus:180

F6VP77              	100.00%		F1NGX6              	100.00%
                    	       		E1C4B0              	10.47%
Bootstrap support for F6VP77 as seed ortholog is 100%.
Bootstrap support for F1NGX6 as seed ortholog is 100%.

Group of orthologs #3834. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 G.gallus:180

F6YNR2              	100.00%		F1NJK4              	100.00%
F6S021              	10.20%		
Bootstrap support for F6YNR2 as seed ortholog is 100%.
Bootstrap support for F1NJK4 as seed ortholog is 100%.

Group of orthologs #3835. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 G.gallus:20

H2XLB2              	100.00%		F1NC23              	100.00%
                    	       		P79785              	12.91%
Bootstrap support for H2XLB2 as seed ortholog is 82%.
Bootstrap support for F1NC23 as seed ortholog is 71%.
Alternative seed ortholog is F1NIF5 (20 bits away from this cluster)

Group of orthologs #3836. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 G.gallus:96

F6V879              	100.00%		Q6PUF4              	100.00%
                    	       		H9KZX0              	76.26%
Bootstrap support for F6V879 as seed ortholog is 99%.
Bootstrap support for Q6PUF4 as seed ortholog is 99%.

Group of orthologs #3837. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 G.gallus:64

F6PTF9              	100.00%		F1NMD0              	100.00%
Bootstrap support for F6PTF9 as seed ortholog is 100%.
Bootstrap support for F1NMD0 as seed ortholog is 86%.

Group of orthologs #3838. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 G.gallus:180

F6SAA4              	100.00%		F1NSF0              	100.00%
Bootstrap support for F6SAA4 as seed ortholog is 100%.
Bootstrap support for F1NSF0 as seed ortholog is 100%.

Group of orthologs #3839. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 G.gallus:180

H2XYG3              	100.00%		E1C4Y6              	100.00%
Bootstrap support for H2XYG3 as seed ortholog is 100%.
Bootstrap support for E1C4Y6 as seed ortholog is 100%.

Group of orthologs #3840. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:0 G.gallus:124

F6XQJ5              	100.00%		H9KZ91              	100.00%
Bootstrap support for F6XQJ5 as seed ortholog is 49%.
Alternative seed ortholog is F6PIA1 (0 bits away from this cluster)
Bootstrap support for H9KZ91 as seed ortholog is 99%.

Group of orthologs #3841. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 G.gallus:180

H2XMW2              	100.00%		F1P439              	100.00%
Bootstrap support for H2XMW2 as seed ortholog is 100%.
Bootstrap support for F1P439 as seed ortholog is 100%.

Group of orthologs #3842. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 G.gallus:180

H2XZL8              	100.00%		F1NLM5              	100.00%
Bootstrap support for H2XZL8 as seed ortholog is 100%.
Bootstrap support for F1NLM5 as seed ortholog is 100%.

Group of orthologs #3843. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 G.gallus:53

H2XQX8              	100.00%		F1NH02              	100.00%
                    	       		F1N8J3              	16.62%
                    	       		F1N8J2              	11.18%
Bootstrap support for H2XQX8 as seed ortholog is 99%.
Bootstrap support for F1NH02 as seed ortholog is 95%.

Group of orthologs #3844. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:99

H2XLQ3              	100.00%		E1BRD6              	100.00%
                    	       		Q5ZJW6              	100.00%
Bootstrap support for H2XLQ3 as seed ortholog is 99%.
Bootstrap support for E1BRD6 as seed ortholog is 100%.
Bootstrap support for Q5ZJW6 as seed ortholog is 99%.

Group of orthologs #3845. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 G.gallus:58

F7B1K2              	100.00%		F1NY26              	100.00%
                    	       		F1NLB5              	26.80%
Bootstrap support for F7B1K2 as seed ortholog is 92%.
Bootstrap support for F1NY26 as seed ortholog is 97%.

Group of orthologs #3846. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 G.gallus:179

F7AMY5              	100.00%		E1BTZ8              	100.00%
Bootstrap support for F7AMY5 as seed ortholog is 100%.
Bootstrap support for E1BTZ8 as seed ortholog is 100%.

Group of orthologs #3847. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 G.gallus:179

F6ZMJ7              	100.00%		F1NM85              	100.00%
Bootstrap support for F6ZMJ7 as seed ortholog is 100%.
Bootstrap support for F1NM85 as seed ortholog is 100%.

Group of orthologs #3848. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 G.gallus:50

F6SBE5              	100.00%		P79757              	100.00%
Bootstrap support for F6SBE5 as seed ortholog is 100%.
Bootstrap support for P79757 as seed ortholog is 82%.

Group of orthologs #3849. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:178

F6YUL2              	100.00%		E1BYS5              	100.00%
                    	       		H9KYY1              	17.29%
Bootstrap support for F6YUL2 as seed ortholog is 100%.
Bootstrap support for E1BYS5 as seed ortholog is 100%.

Group of orthologs #3850. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:178

H2XZ02              	100.00%		F1NRN5              	100.00%
                    	       		E1BZN3              	38.05%
Bootstrap support for H2XZ02 as seed ortholog is 100%.
Bootstrap support for F1NRN5 as seed ortholog is 100%.

Group of orthologs #3851. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 G.gallus:93

F6R1D9              	100.00%		E1BZ22              	100.00%
Bootstrap support for F6R1D9 as seed ortholog is 99%.
Bootstrap support for E1BZ22 as seed ortholog is 99%.

Group of orthologs #3852. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:178

F6UXU4              	100.00%		E1BVR9              	100.00%
Bootstrap support for F6UXU4 as seed ortholog is 100%.
Bootstrap support for E1BVR9 as seed ortholog is 100%.

Group of orthologs #3853. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:178

F6T5W3              	100.00%		E1C2M8              	100.00%
Bootstrap support for F6T5W3 as seed ortholog is 100%.
Bootstrap support for E1C2M8 as seed ortholog is 100%.

Group of orthologs #3854. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 G.gallus:178

F6YHE2              	100.00%		E1C483              	100.00%
Bootstrap support for F6YHE2 as seed ortholog is 99%.
Bootstrap support for E1C483 as seed ortholog is 100%.

Group of orthologs #3855. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:178

F7B819              	100.00%		F1N915              	100.00%
Bootstrap support for F7B819 as seed ortholog is 100%.
Bootstrap support for F1N915 as seed ortholog is 100%.

Group of orthologs #3856. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:178

H2XRS9              	100.00%		E1C4J5              	100.00%
Bootstrap support for H2XRS9 as seed ortholog is 100%.
Bootstrap support for E1C4J5 as seed ortholog is 100%.

Group of orthologs #3857. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:178

H2XP91              	100.00%		E1C9J2              	100.00%
Bootstrap support for H2XP91 as seed ortholog is 100%.
Bootstrap support for E1C9J2 as seed ortholog is 100%.

Group of orthologs #3858. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:78

H2XJN2              	100.00%		F1NUE9              	100.00%
Bootstrap support for H2XJN2 as seed ortholog is 100%.
Bootstrap support for F1NUE9 as seed ortholog is 99%.

Group of orthologs #3859. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 G.gallus:38

F6YCN8              	100.00%		P02588              	100.00%
Bootstrap support for F6YCN8 as seed ortholog is 71%.
Alternative seed ortholog is F6T2A6 (14 bits away from this cluster)
Bootstrap support for P02588 as seed ortholog is 95%.

Group of orthologs #3860. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 G.gallus:34

H2XYT9              	100.00%		F1NHL9              	100.00%
Bootstrap support for H2XYT9 as seed ortholog is 74%.
Alternative seed ortholog is F6ZA54 (41 bits away from this cluster)
Bootstrap support for F1NHL9 as seed ortholog is 68%.
Alternative seed ortholog is F1NBS2 (34 bits away from this cluster)

Group of orthologs #3861. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:35

H2XLK7              	100.00%		H9KYT9              	100.00%
Bootstrap support for H2XLK7 as seed ortholog is 100%.
Bootstrap support for H9KYT9 as seed ortholog is 98%.

Group of orthologs #3862. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:178

F7BC02              	100.00%		Q5ZJI9              	100.00%
Bootstrap support for F7BC02 as seed ortholog is 100%.
Bootstrap support for Q5ZJI9 as seed ortholog is 100%.

Group of orthologs #3863. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 G.gallus:178

H2Y139              	100.00%		F1P540              	100.00%
Bootstrap support for H2Y139 as seed ortholog is 100%.
Bootstrap support for F1P540 as seed ortholog is 100%.

Group of orthologs #3864. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 G.gallus:39

Q1RLE5              	100.00%		F1P2M2              	100.00%
Bootstrap support for Q1RLE5 as seed ortholog is 87%.
Bootstrap support for F1P2M2 as seed ortholog is 86%.

Group of orthologs #3865. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 G.gallus:177

Q4H3W1              	100.00%		F1NCD2              	100.00%
                    	       		O93602              	12.43%
Bootstrap support for Q4H3W1 as seed ortholog is 100%.
Bootstrap support for F1NCD2 as seed ortholog is 100%.

Group of orthologs #3866. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 G.gallus:177

F6U857              	100.00%		E1BU46              	100.00%
Bootstrap support for F6U857 as seed ortholog is 100%.
Bootstrap support for E1BU46 as seed ortholog is 100%.

Group of orthologs #3867. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 G.gallus:177

F6ZD22              	100.00%		E1BUC6              	100.00%
Bootstrap support for F6ZD22 as seed ortholog is 100%.
Bootstrap support for E1BUC6 as seed ortholog is 100%.

Group of orthologs #3868. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 G.gallus:177

F6XL60              	100.00%		E1C2W0              	100.00%
Bootstrap support for F6XL60 as seed ortholog is 100%.
Bootstrap support for E1C2W0 as seed ortholog is 100%.

Group of orthologs #3869. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 G.gallus:177

F6PV21              	100.00%		F1NPW8              	100.00%
Bootstrap support for F6PV21 as seed ortholog is 100%.
Bootstrap support for F1NPW8 as seed ortholog is 100%.

Group of orthologs #3870. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:177

F6UTK0              	100.00%		F1NWW9              	100.00%
Bootstrap support for F6UTK0 as seed ortholog is 100%.
Bootstrap support for F1NWW9 as seed ortholog is 100%.

Group of orthologs #3871. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 G.gallus:177

F7AW07              	100.00%		F1NMM3              	100.00%
Bootstrap support for F7AW07 as seed ortholog is 100%.
Bootstrap support for F1NMM3 as seed ortholog is 100%.

Group of orthologs #3872. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 G.gallus:177

H2Y2E7              	100.00%		Q5ZJL8              	100.00%
Bootstrap support for H2Y2E7 as seed ortholog is 100%.
Bootstrap support for Q5ZJL8 as seed ortholog is 100%.

Group of orthologs #3873. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 G.gallus:176

F7AWE3              	100.00%		F1P159              	100.00%
                    	       		F1NZ46              	19.79%
                    	       		F1NKN9              	18.76%
                    	       		F1NS25              	17.94%
                    	       		F1NCF2              	17.73%
                    	       		F1NPP3              	17.11%
                    	       		F1NFV3              	16.91%
                    	       		E1BRF6              	16.70%
                    	       		F1NWJ3              	16.70%
                    	       		F1N877              	16.29%
                    	       		F1NC66              	16.29%
                    	       		F1NWF4              	16.08%
                    	       		F1NJA3              	15.67%
                    	       		F1NCF3              	15.26%
                    	       		F1NPS7              	15.26%
                    	       		H9KZF3              	12.37%
                    	       		F1NHI8              	10.31%
                    	       		F1NPP9              	10.10%
Bootstrap support for F7AWE3 as seed ortholog is 100%.
Bootstrap support for F1P159 as seed ortholog is 100%.

Group of orthologs #3874. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 G.gallus:5

F6WJ31              	100.00%		E1BY09              	100.00%
                    	       		E1C3P7              	11.91%
                    	       		F1NSK0              	8.82%
                    	       		E1C9I5              	7.28%
                    	       		E1BR19              	6.17%
                    	       		Q5ZM39              	5.62%
Bootstrap support for F6WJ31 as seed ortholog is 47%.
Alternative seed ortholog is F6QEX4 (4 bits away from this cluster)
Bootstrap support for E1BY09 as seed ortholog is 41%.
Alternative seed ortholog is E1BQ46 (5 bits away from this cluster)

Group of orthologs #3875. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 G.gallus:94

F6YH02              	100.00%		O42401              	100.00%
                    	       		E1BQ45              	25.17%
                    	       		P05099              	20.53%
Bootstrap support for F6YH02 as seed ortholog is 100%.
Bootstrap support for O42401 as seed ortholog is 99%.

Group of orthologs #3876. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 G.gallus:176

F7BMP3              	100.00%		E1BQQ7              	100.00%
                    	       		Q5ZKB4              	100.00%
Bootstrap support for F7BMP3 as seed ortholog is 100%.
Bootstrap support for E1BQQ7 as seed ortholog is 100%.
Bootstrap support for Q5ZKB4 as seed ortholog is 100%.

Group of orthologs #3877. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 G.gallus:113

F6YV39              	100.00%		F1NDW3              	100.00%
Bootstrap support for F6YV39 as seed ortholog is 100%.
Bootstrap support for F1NDW3 as seed ortholog is 99%.

Group of orthologs #3878. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 G.gallus:176

H2XTD6              	100.00%		E1C310              	100.00%
Bootstrap support for H2XTD6 as seed ortholog is 100%.
Bootstrap support for E1C310 as seed ortholog is 100%.

Group of orthologs #3879. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 G.gallus:176

F6ZVS4              	100.00%		F1NRT1              	100.00%
Bootstrap support for F6ZVS4 as seed ortholog is 100%.
Bootstrap support for F1NRT1 as seed ortholog is 100%.

Group of orthologs #3880. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 G.gallus:176

H2Y3Q9              	100.00%		F1N8V2              	100.00%
Bootstrap support for H2Y3Q9 as seed ortholog is 100%.
Bootstrap support for F1N8V2 as seed ortholog is 100%.

Group of orthologs #3881. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 G.gallus:176

H2XWT2              	100.00%		F1NM75              	100.00%
Bootstrap support for H2XWT2 as seed ortholog is 99%.
Bootstrap support for F1NM75 as seed ortholog is 100%.

Group of orthologs #3882. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 G.gallus:176

H2XR40              	100.00%		H9KZ02              	100.00%
Bootstrap support for H2XR40 as seed ortholog is 100%.
Bootstrap support for H9KZ02 as seed ortholog is 100%.

Group of orthologs #3883. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 G.gallus:176

F7AU71              	100.00%		Q5ZLN6              	100.00%
Bootstrap support for F7AU71 as seed ortholog is 100%.
Bootstrap support for Q5ZLN6 as seed ortholog is 100%.

Group of orthologs #3884. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 G.gallus:176

H2XMY1              	100.00%		Q5ZKY9              	100.00%
Bootstrap support for H2XMY1 as seed ortholog is 100%.
Bootstrap support for Q5ZKY9 as seed ortholog is 100%.

Group of orthologs #3885. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 G.gallus:175

F6WFD1              	100.00%		E1C5W2              	100.00%
                    	       		F1NMH4              	23.51%
                    	       		E1BWS6              	18.17%
                    	       		F1P5G7              	9.04%
Bootstrap support for F6WFD1 as seed ortholog is 100%.
Bootstrap support for E1C5W2 as seed ortholog is 100%.

Group of orthologs #3886. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 G.gallus:94

Q4H336              	100.00%		F1NK86              	100.00%
                    	       		O93525              	20.49%
Bootstrap support for Q4H336 as seed ortholog is 100%.
Bootstrap support for F1NK86 as seed ortholog is 99%.

Group of orthologs #3887. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 G.gallus:175

F6X3J8              	100.00%		E1C3R6              	100.00%
Bootstrap support for F6X3J8 as seed ortholog is 100%.
Bootstrap support for E1C3R6 as seed ortholog is 100%.

Group of orthologs #3888. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 G.gallus:175

F6V9A1              	100.00%		F1N9W9              	100.00%
Bootstrap support for F6V9A1 as seed ortholog is 100%.
Bootstrap support for F1N9W9 as seed ortholog is 100%.

Group of orthologs #3889. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 G.gallus:10

F6UMK0              	100.00%		F1NDZ1              	100.00%
Bootstrap support for F6UMK0 as seed ortholog is 61%.
Alternative seed ortholog is F6V6U3 (11 bits away from this cluster)
Bootstrap support for F1NDZ1 as seed ortholog is 60%.
Alternative seed ortholog is P15120 (10 bits away from this cluster)

Group of orthologs #3890. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 G.gallus:175

F6WCM2              	100.00%		F1NAP2              	100.00%
Bootstrap support for F6WCM2 as seed ortholog is 100%.
Bootstrap support for F1NAP2 as seed ortholog is 100%.

Group of orthologs #3891. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 G.gallus:175

F6V1U5              	100.00%		Q5ZMS2              	100.00%
Bootstrap support for F6V1U5 as seed ortholog is 100%.
Bootstrap support for Q5ZMS2 as seed ortholog is 100%.

Group of orthologs #3892. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 G.gallus:175

F7BPC9              	100.00%		F1NXC6              	100.00%
Bootstrap support for F7BPC9 as seed ortholog is 100%.
Bootstrap support for F1NXC6 as seed ortholog is 100%.

Group of orthologs #3893. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 G.gallus:175

H2XRT6              	100.00%		F1NSN4              	100.00%
Bootstrap support for H2XRT6 as seed ortholog is 100%.
Bootstrap support for F1NSN4 as seed ortholog is 100%.

Group of orthologs #3894. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 G.gallus:174

F6RM35              	100.00%		E1C697              	100.00%
                    	       		E1BYU7              	18.88%
Bootstrap support for F6RM35 as seed ortholog is 99%.
Bootstrap support for E1C697 as seed ortholog is 100%.

Group of orthologs #3895. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 G.gallus:174

F6VMI7              	100.00%		F1NMW3              	100.00%
                    	       		H9L3J4              	31.79%
Bootstrap support for F6VMI7 as seed ortholog is 100%.
Bootstrap support for F1NMW3 as seed ortholog is 100%.

Group of orthologs #3896. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 G.gallus:174

H2XJZ7              	100.00%		E1BVG1              	100.00%
Bootstrap support for H2XJZ7 as seed ortholog is 100%.
Bootstrap support for E1BVG1 as seed ortholog is 100%.

Group of orthologs #3897. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 G.gallus:174

F6UFD0              	100.00%		Q5ZMS1              	100.00%
Bootstrap support for F6UFD0 as seed ortholog is 100%.
Bootstrap support for Q5ZMS1 as seed ortholog is 100%.

Group of orthologs #3898. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 G.gallus:174

H2Y0H4              	100.00%		Q5F3E4              	100.00%
Bootstrap support for H2Y0H4 as seed ortholog is 100%.
Bootstrap support for Q5F3E4 as seed ortholog is 100%.

Group of orthologs #3899. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 G.gallus:126

F6QDM9              	100.00%		Q9W6J2              	100.00%
F6Y3D6              	100.00%		Q08393              	100.00%
F6QDM2              	32.13%		F1NQS2              	53.70%
L7N0U1              	23.83%		Q08392              	52.59%
Bootstrap support for F6QDM9 as seed ortholog is 99%.
Bootstrap support for F6Y3D6 as seed ortholog is 99%.
Bootstrap support for Q9W6J2 as seed ortholog is 100%.
Bootstrap support for Q08393 as seed ortholog is 100%.

Group of orthologs #3900. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 G.gallus:110

H2Y1V3              	100.00%		E1BVW4              	100.00%
                    	       		E1C5W0              	19.60%
                    	       		E1BRQ8              	11.60%
Bootstrap support for H2Y1V3 as seed ortholog is 100%.
Bootstrap support for E1BVW4 as seed ortholog is 100%.

Group of orthologs #3901. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:173

Q4H3N7              	100.00%		P30985              	100.00%
                    	       		F1NIE9              	63.01%
                    	       		F1NVL4              	34.38%
Bootstrap support for Q4H3N7 as seed ortholog is 100%.
Bootstrap support for P30985 as seed ortholog is 100%.

Group of orthologs #3902. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:173

F6Z0L2              	100.00%		F1NUW5              	100.00%
                    	       		Q5ZHR7              	22.92%
Bootstrap support for F6Z0L2 as seed ortholog is 100%.
Bootstrap support for F1NUW5 as seed ortholog is 100%.

Group of orthologs #3903. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 G.gallus:27

F6XBI2              	100.00%		F1P1X3              	100.00%
                    	       		F1NM80              	11.08%
Bootstrap support for F6XBI2 as seed ortholog is 98%.
Bootstrap support for F1P1X3 as seed ortholog is 78%.

Group of orthologs #3904. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:173

F6TNN0              	100.00%		Q5ZL67              	100.00%
                    	       		F1P315              	9.50%
Bootstrap support for F6TNN0 as seed ortholog is 100%.
Bootstrap support for Q5ZL67 as seed ortholog is 100%.

Group of orthologs #3905. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:173

F6RKZ8              	100.00%		E1BWS4              	100.00%
Bootstrap support for F6RKZ8 as seed ortholog is 100%.
Bootstrap support for E1BWS4 as seed ortholog is 100%.

Group of orthologs #3906. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 G.gallus:173

F6YGG6              	100.00%		E1BW88              	100.00%
Bootstrap support for F6YGG6 as seed ortholog is 100%.
Bootstrap support for E1BW88 as seed ortholog is 100%.

Group of orthologs #3907. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:173

F6TPI3              	100.00%		F1NN03              	100.00%
Bootstrap support for F6TPI3 as seed ortholog is 100%.
Bootstrap support for F1NN03 as seed ortholog is 100%.

Group of orthologs #3908. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:173

F6TDK2              	100.00%		F1NPD0              	100.00%
Bootstrap support for F6TDK2 as seed ortholog is 100%.
Bootstrap support for F1NPD0 as seed ortholog is 100%.

Group of orthologs #3909. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:173

F7AGV8              	100.00%		F1NX49              	100.00%
Bootstrap support for F7AGV8 as seed ortholog is 100%.
Bootstrap support for F1NX49 as seed ortholog is 100%.

Group of orthologs #3910. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:173

F6VUV2              	100.00%		Q5ZK75              	100.00%
Bootstrap support for F6VUV2 as seed ortholog is 99%.
Bootstrap support for Q5ZK75 as seed ortholog is 100%.

Group of orthologs #3911. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:173

H2XWE7              	100.00%		F1NQ35              	100.00%
Bootstrap support for H2XWE7 as seed ortholog is 100%.
Bootstrap support for F1NQ35 as seed ortholog is 100%.

Group of orthologs #3912. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 G.gallus:173

H2XZI6              	100.00%		Q5ZLW9              	100.00%
Bootstrap support for H2XZI6 as seed ortholog is 100%.
Bootstrap support for Q5ZLW9 as seed ortholog is 100%.

Group of orthologs #3913. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 G.gallus:172

F6PVE7              	100.00%		F1NCA4              	100.00%
                    	       		F1NBH4              	53.11%
Bootstrap support for F6PVE7 as seed ortholog is 100%.
Bootstrap support for F1NCA4 as seed ortholog is 100%.

Group of orthologs #3914. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 G.gallus:172

F6UIL0              	100.00%		F1P0N1              	100.00%
Bootstrap support for F6UIL0 as seed ortholog is 100%.
Bootstrap support for F1P0N1 as seed ortholog is 100%.

Group of orthologs #3915. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 G.gallus:172

F6V9L7              	100.00%		F1P0E9              	100.00%
Bootstrap support for F6V9L7 as seed ortholog is 100%.
Bootstrap support for F1P0E9 as seed ortholog is 100%.

Group of orthologs #3916. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 G.gallus:172

H2XLA2              	100.00%		F1NVH4              	100.00%
Bootstrap support for H2XLA2 as seed ortholog is 100%.
Bootstrap support for F1NVH4 as seed ortholog is 100%.

Group of orthologs #3917. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 G.gallus:172

H2XRI7              	100.00%		O42395              	100.00%
Bootstrap support for H2XRI7 as seed ortholog is 100%.
Bootstrap support for O42395 as seed ortholog is 100%.

Group of orthologs #3918. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 G.gallus:121

F6QRU4              	100.00%		E1C4L3              	100.00%
Bootstrap support for F6QRU4 as seed ortholog is 70%.
Alternative seed ortholog is F6WU12 (15 bits away from this cluster)
Bootstrap support for E1C4L3 as seed ortholog is 99%.

Group of orthologs #3919. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 G.gallus:171

H2XK52              	100.00%		E1C5U9              	100.00%
Bootstrap support for H2XK52 as seed ortholog is 100%.
Bootstrap support for E1C5U9 as seed ortholog is 100%.

Group of orthologs #3920. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 G.gallus:171

F7BEP5              	100.00%		F1N9I9              	100.00%
Bootstrap support for F7BEP5 as seed ortholog is 100%.
Bootstrap support for F1N9I9 as seed ortholog is 100%.

Group of orthologs #3921. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 G.gallus:171

F7BME9              	100.00%		F1NA30              	100.00%
Bootstrap support for F7BME9 as seed ortholog is 100%.
Bootstrap support for F1NA30 as seed ortholog is 100%.

Group of orthologs #3922. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 G.gallus:171

F6XGW2              	100.00%		F1NVM4              	100.00%
Bootstrap support for F6XGW2 as seed ortholog is 100%.
Bootstrap support for F1NVM4 as seed ortholog is 100%.

Group of orthologs #3923. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 G.gallus:106

H2XKM5              	100.00%		F1NFM7              	100.00%
Bootstrap support for H2XKM5 as seed ortholog is 100%.
Bootstrap support for F1NFM7 as seed ortholog is 100%.

Group of orthologs #3924. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 G.gallus:13

H2XQ56              	100.00%		F1NX86              	100.00%
Bootstrap support for H2XQ56 as seed ortholog is 100%.
Bootstrap support for F1NX86 as seed ortholog is 88%.

Group of orthologs #3925. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 G.gallus:115

Q4H2N7              	100.00%		F1NJ78              	100.00%
Bootstrap support for Q4H2N7 as seed ortholog is 100%.
Bootstrap support for F1NJ78 as seed ortholog is 99%.

Group of orthologs #3926. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 G.gallus:170

F6U8M1              	100.00%		E1BVG0              	100.00%
                    	       		F1P0U4              	10.12%
Bootstrap support for F6U8M1 as seed ortholog is 100%.
Bootstrap support for E1BVG0 as seed ortholog is 100%.

Group of orthologs #3927. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 G.gallus:66

F7AZZ3              	100.00%		F1NCH5              	100.00%
                    	       		E1BQL0              	51.38%
Bootstrap support for F7AZZ3 as seed ortholog is 76%.
Bootstrap support for F1NCH5 as seed ortholog is 99%.

Group of orthologs #3928. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 G.gallus:170

F6PWX0              	100.00%		Q5ZK09              	100.00%
                    	       		H9KZ85              	21.89%
Bootstrap support for F6PWX0 as seed ortholog is 100%.
Bootstrap support for Q5ZK09 as seed ortholog is 100%.

Group of orthologs #3929. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 G.gallus:170

F6TIT1              	100.00%		E1C103              	100.00%
Bootstrap support for F6TIT1 as seed ortholog is 100%.
Bootstrap support for E1C103 as seed ortholog is 100%.

Group of orthologs #3930. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 G.gallus:170

F6YRU6              	100.00%		E1BUQ9              	100.00%
Bootstrap support for F6YRU6 as seed ortholog is 99%.
Bootstrap support for E1BUQ9 as seed ortholog is 100%.

Group of orthologs #3931. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 G.gallus:170

A8WHA5              	100.00%		F1NLE2              	100.00%
Bootstrap support for A8WHA5 as seed ortholog is 100%.
Bootstrap support for F1NLE2 as seed ortholog is 100%.

Group of orthologs #3932. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 G.gallus:170

F6U3A5              	100.00%		F1NG55              	100.00%
Bootstrap support for F6U3A5 as seed ortholog is 100%.
Bootstrap support for F1NG55 as seed ortholog is 100%.

Group of orthologs #3933. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 G.gallus:170

F6QW82              	100.00%		Q5ZKU0              	100.00%
Bootstrap support for F6QW82 as seed ortholog is 100%.
Bootstrap support for Q5ZKU0 as seed ortholog is 100%.

Group of orthologs #3934. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 G.gallus:170

F7B4F4              	100.00%		F1NIV3              	100.00%
Bootstrap support for F7B4F4 as seed ortholog is 100%.
Bootstrap support for F1NIV3 as seed ortholog is 100%.

Group of orthologs #3935. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 G.gallus:170

H2XVJ2              	100.00%		F1ND65              	100.00%
Bootstrap support for H2XVJ2 as seed ortholog is 100%.
Bootstrap support for F1ND65 as seed ortholog is 100%.

Group of orthologs #3936. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 G.gallus:170

H2XPL7              	100.00%		F1NZR8              	100.00%
Bootstrap support for H2XPL7 as seed ortholog is 100%.
Bootstrap support for F1NZR8 as seed ortholog is 100%.

Group of orthologs #3937. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 G.gallus:104

H2Y060              	100.00%		P08267              	100.00%
Bootstrap support for H2Y060 as seed ortholog is 99%.
Bootstrap support for P08267 as seed ortholog is 99%.

Group of orthologs #3938. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 G.gallus:45

F6SGF2              	100.00%		C4PBU7              	100.00%
                    	       		Q9DD78              	10.20%
                    	       		Q9DGB6              	10.00%
                    	       		C4PBN9              	6.96%
Bootstrap support for F6SGF2 as seed ortholog is 73%.
Alternative seed ortholog is H2XZF2 (67 bits away from this cluster)
Bootstrap support for C4PBU7 as seed ortholog is 56%.
Alternative seed ortholog is C4PCF3 (45 bits away from this cluster)

Group of orthologs #3939. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 G.gallus:110

F6Y4L7              	100.00%		F1NJD4              	100.00%
                    	       		E1BYN2              	21.17%
                    	       		E1C732              	18.25%
Bootstrap support for F6Y4L7 as seed ortholog is 100%.
Bootstrap support for F1NJD4 as seed ortholog is 99%.

Group of orthologs #3940. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 G.gallus:169

F6X329              	100.00%		F1NRI9              	100.00%
F7BDB7              	75.84%		H9KZK7              	10.38%
Bootstrap support for F6X329 as seed ortholog is 82%.
Bootstrap support for F1NRI9 as seed ortholog is 100%.

Group of orthologs #3941. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:103

F6T4U7              	100.00%		F1NLD1              	100.00%
F6ZUV3              	19.38%		
Bootstrap support for F6T4U7 as seed ortholog is 99%.
Bootstrap support for F1NLD1 as seed ortholog is 99%.

Group of orthologs #3942. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 G.gallus:50

H2XNX1              	100.00%		E1BRQ2              	100.00%
                    	       		E1C6X3              	54.21%
Bootstrap support for H2XNX1 as seed ortholog is 69%.
Alternative seed ortholog is H2XXW6 (13 bits away from this cluster)
Bootstrap support for E1BRQ2 as seed ortholog is 97%.

Group of orthologs #3943. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 G.gallus:81

F6XHB2              	100.00%		F1NBV2              	100.00%
Bootstrap support for F6XHB2 as seed ortholog is 100%.
Bootstrap support for F1NBV2 as seed ortholog is 99%.

Group of orthologs #3944. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 G.gallus:169

H2XK95              	100.00%		E1BZ65              	100.00%
Bootstrap support for H2XK95 as seed ortholog is 100%.
Bootstrap support for E1BZ65 as seed ortholog is 100%.

Group of orthologs #3945. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 G.gallus:169

F6ZA98              	100.00%		F1N8S9              	100.00%
Bootstrap support for F6ZA98 as seed ortholog is 100%.
Bootstrap support for F1N8S9 as seed ortholog is 100%.

Group of orthologs #3946. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 G.gallus:169

F6TAY9              	100.00%		Q5ZJ67              	100.00%
Bootstrap support for F6TAY9 as seed ortholog is 100%.
Bootstrap support for Q5ZJ67 as seed ortholog is 100%.

Group of orthologs #3947. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:168

F7BPR4              	100.00%		E1C8I8              	100.00%
                    	       		F1N8Y9              	16.16%
Bootstrap support for F7BPR4 as seed ortholog is 100%.
Bootstrap support for E1C8I8 as seed ortholog is 100%.

Group of orthologs #3948. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:168

H2XSM3              	100.00%		E1C6V5              	100.00%
                    	       		E1C355              	7.62%
Bootstrap support for H2XSM3 as seed ortholog is 100%.
Bootstrap support for E1C6V5 as seed ortholog is 100%.

Group of orthologs #3949. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:168

F6SYB9              	100.00%		E1BV65              	100.00%
Bootstrap support for F6SYB9 as seed ortholog is 100%.
Bootstrap support for E1BV65 as seed ortholog is 100%.

Group of orthologs #3950. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:168

F6PSG3              	100.00%		E1C5A4              	100.00%
Bootstrap support for F6PSG3 as seed ortholog is 100%.
Bootstrap support for E1C5A4 as seed ortholog is 100%.

Group of orthologs #3951. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 G.gallus:168

F6PZL2              	100.00%		F1N9S6              	100.00%
Bootstrap support for F6PZL2 as seed ortholog is 100%.
Bootstrap support for F1N9S6 as seed ortholog is 100%.

Group of orthologs #3952. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:101

F6V1C0              	100.00%		E1C1X3              	100.00%
Bootstrap support for F6V1C0 as seed ortholog is 100%.
Bootstrap support for E1C1X3 as seed ortholog is 99%.

Group of orthologs #3953. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:168

F6V5E8              	100.00%		E1C8L5              	100.00%
Bootstrap support for F6V5E8 as seed ortholog is 100%.
Bootstrap support for E1C8L5 as seed ortholog is 100%.

Group of orthologs #3954. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:168

F6ZFV5              	100.00%		E1C0R9              	100.00%
Bootstrap support for F6ZFV5 as seed ortholog is 100%.
Bootstrap support for E1C0R9 as seed ortholog is 100%.

Group of orthologs #3955. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:168

F7A410              	100.00%		E1C0F0              	100.00%
Bootstrap support for F7A410 as seed ortholog is 100%.
Bootstrap support for E1C0F0 as seed ortholog is 100%.

Group of orthologs #3956. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:168

H2XXT7              	100.00%		E1C843              	100.00%
Bootstrap support for H2XXT7 as seed ortholog is 100%.
Bootstrap support for E1C843 as seed ortholog is 100%.

Group of orthologs #3957. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:168

F7BNZ7              	100.00%		F1NWI2              	100.00%
Bootstrap support for F7BNZ7 as seed ortholog is 100%.
Bootstrap support for F1NWI2 as seed ortholog is 100%.

Group of orthologs #3958. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:117

Q1RPU6              	100.00%		E1C6D4              	100.00%
Bootstrap support for Q1RPU6 as seed ortholog is 100%.
Bootstrap support for E1C6D4 as seed ortholog is 100%.

Group of orthologs #3959. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 G.gallus:168

H2XRV6              	100.00%		Q5ZK05              	100.00%
Bootstrap support for H2XRV6 as seed ortholog is 100%.
Bootstrap support for Q5ZK05 as seed ortholog is 100%.

Group of orthologs #3960. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 G.gallus:167

F6U899              	100.00%		D5M8S2              	100.00%
                    	       		Q8UW59              	99.02%
Bootstrap support for F6U899 as seed ortholog is 100%.
Bootstrap support for D5M8S2 as seed ortholog is 100%.

Group of orthologs #3961. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 G.gallus:167

F6VQ55              	100.00%		E1BTZ4              	100.00%
Bootstrap support for F6VQ55 as seed ortholog is 100%.
Bootstrap support for E1BTZ4 as seed ortholog is 100%.

Group of orthologs #3962. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 G.gallus:167

F6YB21              	100.00%		F1NIK4              	100.00%
Bootstrap support for F6YB21 as seed ortholog is 100%.
Bootstrap support for F1NIK4 as seed ortholog is 100%.

Group of orthologs #3963. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 G.gallus:167

F6UB97              	100.00%		F1P0B7              	100.00%
Bootstrap support for F6UB97 as seed ortholog is 100%.
Bootstrap support for F1P0B7 as seed ortholog is 100%.

Group of orthologs #3964. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 G.gallus:56

F6VH27              	100.00%		F1P3T7              	100.00%
Bootstrap support for F6VH27 as seed ortholog is 88%.
Bootstrap support for F1P3T7 as seed ortholog is 95%.

Group of orthologs #3965. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 G.gallus:167

H2XRC6              	100.00%		F1NQL6              	100.00%
Bootstrap support for H2XRC6 as seed ortholog is 100%.
Bootstrap support for F1NQL6 as seed ortholog is 100%.

Group of orthologs #3966. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 G.gallus:167

H2Y0C1              	100.00%		F1ND25              	100.00%
Bootstrap support for H2Y0C1 as seed ortholog is 100%.
Bootstrap support for F1ND25 as seed ortholog is 100%.

Group of orthologs #3967. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 G.gallus:167

F6XB46              	100.00%		Q5ZKJ4              	100.00%
Bootstrap support for F6XB46 as seed ortholog is 100%.
Bootstrap support for Q5ZKJ4 as seed ortholog is 100%.

Group of orthologs #3968. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 G.gallus:167

F6XZJ5              	100.00%		Q75QI0              	100.00%
Bootstrap support for F6XZJ5 as seed ortholog is 100%.
Bootstrap support for Q75QI0 as seed ortholog is 100%.

Group of orthologs #3969. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 G.gallus:166

F6TJ37              	100.00%		E1BV88              	100.00%
                    	       		F1NJV1              	16.30%
Bootstrap support for F6TJ37 as seed ortholog is 100%.
Bootstrap support for E1BV88 as seed ortholog is 100%.

Group of orthologs #3970. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 G.gallus:85

F6SBG0              	100.00%		F1P2E9              	100.00%
                    	       		F1P0G8              	30.63%
Bootstrap support for F6SBG0 as seed ortholog is 100%.
Bootstrap support for F1P2E9 as seed ortholog is 96%.

Group of orthologs #3971. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 G.gallus:166

H2Y1B1              	100.00%		E1C0B7              	100.00%
                    	       		F1NA95              	5.53%
Bootstrap support for H2Y1B1 as seed ortholog is 100%.
Bootstrap support for E1C0B7 as seed ortholog is 100%.

Group of orthologs #3972. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 G.gallus:166

H2XPU1              	100.00%		F1NYH8              	100.00%
                    	       		F1P3F4              	32.88%
Bootstrap support for H2XPU1 as seed ortholog is 100%.
Bootstrap support for F1NYH8 as seed ortholog is 100%.

Group of orthologs #3973. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 G.gallus:166

F6Q6C3              	100.00%		F1NL99              	100.00%
Bootstrap support for F6Q6C3 as seed ortholog is 100%.
Bootstrap support for F1NL99 as seed ortholog is 100%.

Group of orthologs #3974. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 G.gallus:166

F6VTY2              	100.00%		F1N856              	100.00%
Bootstrap support for F6VTY2 as seed ortholog is 100%.
Bootstrap support for F1N856 as seed ortholog is 100%.

Group of orthologs #3975. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 G.gallus:166

F7AZH2              	100.00%		E1C3Q8              	100.00%
Bootstrap support for F7AZH2 as seed ortholog is 100%.
Bootstrap support for E1C3Q8 as seed ortholog is 100%.

Group of orthologs #3976. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 G.gallus:43

F6SJR0              	100.00%		H9KZ63              	100.00%
Bootstrap support for F6SJR0 as seed ortholog is 48%.
Alternative seed ortholog is F6ZB26 (1 bits away from this cluster)
Bootstrap support for H9KZ63 as seed ortholog is 94%.

Group of orthologs #3977. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 G.gallus:166

H2XPG9              	100.00%		F1NGT6              	100.00%
Bootstrap support for H2XPG9 as seed ortholog is 100%.
Bootstrap support for F1NGT6 as seed ortholog is 100%.

Group of orthologs #3978. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 G.gallus:166

F6UC03              	100.00%		Q5ZHV7              	100.00%
Bootstrap support for F6UC03 as seed ortholog is 100%.
Bootstrap support for Q5ZHV7 as seed ortholog is 100%.

Group of orthologs #3979. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 G.gallus:166

F6WQD2              	100.00%		Q5ZKB6              	100.00%
Bootstrap support for F6WQD2 as seed ortholog is 100%.
Bootstrap support for Q5ZKB6 as seed ortholog is 100%.

Group of orthologs #3980. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 G.gallus:166

H2XWA4              	100.00%		F1NNT4              	100.00%
Bootstrap support for H2XWA4 as seed ortholog is 100%.
Bootstrap support for F1NNT4 as seed ortholog is 100%.

Group of orthologs #3981. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 G.gallus:113

H2XW88              	100.00%		Q9I882              	100.00%
Bootstrap support for H2XW88 as seed ortholog is 75%.
Bootstrap support for Q9I882 as seed ortholog is 100%.

Group of orthologs #3982. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 G.gallus:86

H2XVQ5              	100.00%		F1NTW7              	100.00%
F6RQ77              	63.13%		Q8UWC1              	21.90%
H2XY63              	11.29%		F1N9G8              	21.08%
F6T2T0              	10.60%		
F6WMW7              	10.37%		
F6ZT75              	10.37%		
F6Q7J8              	9.45%		
F6UH52              	9.45%		
F6TC09              	9.22%		
H2XM68              	7.60%		
F6QWY0              	7.37%		
F6UDE2              	7.37%		
F6T435              	7.14%		
F6W505              	6.68%		
F7A8W7              	6.45%		
H2XN59              	6.45%		
H2XZA1              	5.99%		
F6W5Z3              	5.76%		
H2XV74              	5.30%		
F6QWZ9              	5.07%		
H2Y0V5              	5.07%		
H2Y248              	5.07%		
Bootstrap support for H2XVQ5 as seed ortholog is 94%.
Bootstrap support for F1NTW7 as seed ortholog is 98%.

Group of orthologs #3983. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 G.gallus:107

Q1RLF5              	100.00%		H9KYR6              	100.00%
                    	       		F1NTA3              	12.43%
                    	       		Q90WR8              	11.95%
Bootstrap support for Q1RLF5 as seed ortholog is 100%.
Bootstrap support for H9KYR6 as seed ortholog is 99%.

Group of orthologs #3984. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 G.gallus:165

H2Y104              	100.00%		F1NAH7              	100.00%
                    	       		E1BQ85              	15.48%
Bootstrap support for H2Y104 as seed ortholog is 100%.
Bootstrap support for F1NAH7 as seed ortholog is 100%.

Group of orthologs #3985. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 G.gallus:165

F7APG8              	100.00%		F1NEW6              	100.00%
Bootstrap support for F7APG8 as seed ortholog is 100%.
Bootstrap support for F1NEW6 as seed ortholog is 100%.

Group of orthologs #3986. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 G.gallus:56

H2XMU3              	100.00%		F1N822              	100.00%
Bootstrap support for H2XMU3 as seed ortholog is 82%.
Bootstrap support for F1N822 as seed ortholog is 99%.

Group of orthologs #3987. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 G.gallus:165

H2XPT5              	100.00%		E1C7B4              	100.00%
Bootstrap support for H2XPT5 as seed ortholog is 100%.
Bootstrap support for E1C7B4 as seed ortholog is 100%.

Group of orthologs #3988. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 G.gallus:165

F6S2Y7              	100.00%		Q90673              	100.00%
Bootstrap support for F6S2Y7 as seed ortholog is 100%.
Bootstrap support for Q90673 as seed ortholog is 100%.

Group of orthologs #3989. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 G.gallus:165

F6WJ25              	100.00%		H9L0B0              	100.00%
Bootstrap support for F6WJ25 as seed ortholog is 100%.
Bootstrap support for H9L0B0 as seed ortholog is 100%.

Group of orthologs #3990. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 G.gallus:165

F6VE17              	100.00%		Q5ZIX3              	100.00%
Bootstrap support for F6VE17 as seed ortholog is 100%.
Bootstrap support for Q5ZIX3 as seed ortholog is 100%.

Group of orthologs #3991. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 G.gallus:165

F6WT81              	100.00%		Q5ZKX3              	100.00%
Bootstrap support for F6WT81 as seed ortholog is 100%.
Bootstrap support for Q5ZKX3 as seed ortholog is 100%.

Group of orthologs #3992. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:165

H2Y2A8              	100.00%		F1NJB2              	100.00%
Bootstrap support for H2Y2A8 as seed ortholog is 99%.
Bootstrap support for F1NJB2 as seed ortholog is 100%.

Group of orthologs #3993. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 G.gallus:165

H2XY81              	100.00%		F1NRY8              	100.00%
Bootstrap support for H2XY81 as seed ortholog is 100%.
Bootstrap support for F1NRY8 as seed ortholog is 100%.

Group of orthologs #3994. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 G.gallus:165

Q589R6              	100.00%		F1NJF3              	100.00%
Bootstrap support for Q589R6 as seed ortholog is 95%.
Bootstrap support for F1NJF3 as seed ortholog is 100%.

Group of orthologs #3995. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 G.gallus:165

H2XW11              	100.00%		F1P462              	100.00%
Bootstrap support for H2XW11 as seed ortholog is 98%.
Bootstrap support for F1P462 as seed ortholog is 100%.

Group of orthologs #3996. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 G.gallus:164

F6XVZ5              	100.00%		E1BSX2              	100.00%
                    	       		P26932              	43.88%
Bootstrap support for F6XVZ5 as seed ortholog is 100%.
Bootstrap support for E1BSX2 as seed ortholog is 100%.

Group of orthologs #3997. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 G.gallus:164

F6W6D7              	100.00%		Q5F3D1              	100.00%
                    	       		F1NEG3              	91.56%
Bootstrap support for F6W6D7 as seed ortholog is 100%.
Bootstrap support for Q5F3D1 as seed ortholog is 100%.

Group of orthologs #3998. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 G.gallus:41

F6YA88              	100.00%		E1BWA0              	100.00%
Bootstrap support for F6YA88 as seed ortholog is 50%.
Alternative seed ortholog is F6Y790 (2 bits away from this cluster)
Bootstrap support for E1BWA0 as seed ortholog is 93%.

Group of orthologs #3999. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 G.gallus:164

H2Y306              	100.00%		E1C7B9              	100.00%
Bootstrap support for H2Y306 as seed ortholog is 100%.
Bootstrap support for E1C7B9 as seed ortholog is 100%.

Group of orthologs #4000. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 G.gallus:164

F7AEJ9              	100.00%		F1P527              	100.00%
Bootstrap support for F7AEJ9 as seed ortholog is 100%.
Bootstrap support for F1P527 as seed ortholog is 100%.

Group of orthologs #4001. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 G.gallus:164

F7ATY3              	100.00%		Q5ZLI0              	100.00%
Bootstrap support for F7ATY3 as seed ortholog is 100%.
Bootstrap support for Q5ZLI0 as seed ortholog is 100%.

Group of orthologs #4002. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

F7B2W7              	100.00%		F1NTP5              	100.00%
                    	       		O42400              	100.00%
                    	       		F1P136              	29.28%
Bootstrap support for F7B2W7 as seed ortholog is 100%.
Bootstrap support for F1NTP5 as seed ortholog is 100%.
Bootstrap support for O42400 as seed ortholog is 100%.

Group of orthologs #4003. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

F6ZFJ3              	100.00%		F1N951              	100.00%
F6WGT4              	13.93%		
Bootstrap support for F6ZFJ3 as seed ortholog is 100%.
Bootstrap support for F1N951 as seed ortholog is 100%.

Group of orthologs #4004. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

F6ST26              	100.00%		P33879              	100.00%
                    	       		Q2HZ96              	15.05%
Bootstrap support for F6ST26 as seed ortholog is 100%.
Bootstrap support for P33879 as seed ortholog is 100%.

Group of orthologs #4005. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

F6YLX3              	100.00%		F1P4F1              	100.00%
                    	       		E1C793              	28.99%
Bootstrap support for F6YLX3 as seed ortholog is 100%.
Bootstrap support for F1P4F1 as seed ortholog is 100%.

Group of orthologs #4006. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 G.gallus:18

Q1RQ09              	100.00%		F1NA20              	100.00%
                    	       		Q92010              	100.00%
Bootstrap support for Q1RQ09 as seed ortholog is 73%.
Alternative seed ortholog is F6ZJ76 (38 bits away from this cluster)
Bootstrap support for F1NA20 as seed ortholog is 71%.
Alternative seed ortholog is E1C2G5 (18 bits away from this cluster)
Bootstrap support for Q92010 as seed ortholog is 70%.
Alternative seed ortholog is E1C2G5 (18 bits away from this cluster)

Group of orthologs #4007. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

F6XRM1              	100.00%		E1BQN9              	100.00%
Bootstrap support for F6XRM1 as seed ortholog is 100%.
Bootstrap support for E1BQN9 as seed ortholog is 100%.

Group of orthologs #4008. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

F6YPN5              	100.00%		E1BYQ1              	100.00%
Bootstrap support for F6YPN5 as seed ortholog is 100%.
Bootstrap support for E1BYQ1 as seed ortholog is 100%.

Group of orthologs #4009. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

F6XTP5              	100.00%		E1C1Y2              	100.00%
Bootstrap support for F6XTP5 as seed ortholog is 100%.
Bootstrap support for E1C1Y2 as seed ortholog is 100%.

Group of orthologs #4010. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

F6TB84              	100.00%		F1NIK8              	100.00%
Bootstrap support for F6TB84 as seed ortholog is 100%.
Bootstrap support for F1NIK8 as seed ortholog is 100%.

Group of orthologs #4011. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 G.gallus:163

F6U0U0              	100.00%		F1NGW2              	100.00%
Bootstrap support for F6U0U0 as seed ortholog is 97%.
Bootstrap support for F1NGW2 as seed ortholog is 100%.

Group of orthologs #4012. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

F6XH64              	100.00%		E1C9A0              	100.00%
Bootstrap support for F6XH64 as seed ortholog is 100%.
Bootstrap support for E1C9A0 as seed ortholog is 100%.

Group of orthologs #4013. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

F7B9H1              	100.00%		E1BY51              	100.00%
Bootstrap support for F7B9H1 as seed ortholog is 100%.
Bootstrap support for E1BY51 as seed ortholog is 100%.

Group of orthologs #4014. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

H2XPJ3              	100.00%		E1BUG9              	100.00%
Bootstrap support for H2XPJ3 as seed ortholog is 100%.
Bootstrap support for E1BUG9 as seed ortholog is 100%.

Group of orthologs #4015. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

F7AMW5              	100.00%		F1NXW3              	100.00%
Bootstrap support for F7AMW5 as seed ortholog is 100%.
Bootstrap support for F1NXW3 as seed ortholog is 100%.

Group of orthologs #4016. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

F6VQE7              	100.00%		Q9DG23              	100.00%
Bootstrap support for F6VQE7 as seed ortholog is 100%.
Bootstrap support for Q9DG23 as seed ortholog is 100%.

Group of orthologs #4017. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

H2Y320              	100.00%		F1NCE5              	100.00%
Bootstrap support for H2Y320 as seed ortholog is 100%.
Bootstrap support for F1NCE5 as seed ortholog is 100%.

Group of orthologs #4018. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

F7AI05              	100.00%		Q5ZK23              	100.00%
Bootstrap support for F7AI05 as seed ortholog is 100%.
Bootstrap support for Q5ZK23 as seed ortholog is 100%.

Group of orthologs #4019. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

H2Y3G2              	100.00%		F1NNS6              	100.00%
Bootstrap support for H2Y3G2 as seed ortholog is 100%.
Bootstrap support for F1NNS6 as seed ortholog is 100%.

Group of orthologs #4020. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 G.gallus:163

H2XTZ1              	100.00%		P67881              	100.00%
Bootstrap support for H2XTZ1 as seed ortholog is 99%.
Bootstrap support for P67881 as seed ortholog is 100%.

Group of orthologs #4021. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

Q1RL82              	100.00%		F1P2L0              	100.00%
Bootstrap support for Q1RL82 as seed ortholog is 100%.
Bootstrap support for F1P2L0 as seed ortholog is 100%.

Group of orthologs #4022. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 G.gallus:163

H2XV81              	100.00%		Q5ZID2              	100.00%
Bootstrap support for H2XV81 as seed ortholog is 100%.
Bootstrap support for Q5ZID2 as seed ortholog is 100%.

Group of orthologs #4023. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 G.gallus:162

H2XJL5              	100.00%		F1P4H5              	9.60%
H2XLT4              	100.00%		F1NBC2              	100.00%
H2XQE2              	62.48%		F1NHG2              	6.45%
                    	       		F1P4H6              	6.15%
Bootstrap support for H2XJL5 as seed ortholog is 98%.
Bootstrap support for H2XLT4 as seed ortholog is 98%.
Bootstrap support for F1NBC2 as seed ortholog is 100%.

Group of orthologs #4024. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 G.gallus:78

H2XLJ7              	100.00%		E1C238              	100.00%
Bootstrap support for H2XLJ7 as seed ortholog is 100%.
Bootstrap support for E1C238 as seed ortholog is 99%.

Group of orthologs #4025. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 G.gallus:162

H2XXK5              	100.00%		E1C358              	100.00%
Bootstrap support for H2XXK5 as seed ortholog is 100%.
Bootstrap support for E1C358 as seed ortholog is 100%.

Group of orthologs #4026. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:162

F7AUS4              	100.00%		F1P0C4              	100.00%
Bootstrap support for F7AUS4 as seed ortholog is 99%.
Bootstrap support for F1P0C4 as seed ortholog is 100%.

Group of orthologs #4027. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 G.gallus:93

F6Y2V8              	100.00%		Q5ZM99              	100.00%
Bootstrap support for F6Y2V8 as seed ortholog is 96%.
Bootstrap support for Q5ZM99 as seed ortholog is 98%.

Group of orthologs #4028. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:161

H2XY48              	100.00%		Q5ZIF1              	100.00%
F6T511              	18.71%		G1K318              	98.96%
F6T526              	7.34%		
Bootstrap support for H2XY48 as seed ortholog is 93%.
Bootstrap support for Q5ZIF1 as seed ortholog is 100%.

Group of orthologs #4029. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 G.gallus:45

F6RS38              	100.00%		F1NTA6              	100.00%
                    	       		F1NA57              	21.81%
Bootstrap support for F6RS38 as seed ortholog is 95%.
Bootstrap support for F1NTA6 as seed ortholog is 93%.

Group of orthologs #4030. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 G.gallus:161

F7B8A5              	100.00%		F1NYD0              	100.00%
                    	       		E1BTU9              	22.85%
Bootstrap support for F7B8A5 as seed ortholog is 99%.
Bootstrap support for F1NYD0 as seed ortholog is 100%.

Group of orthologs #4031. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 G.gallus:161

F6Q290              	100.00%		E1C4C3              	100.00%
Bootstrap support for F6Q290 as seed ortholog is 100%.
Bootstrap support for E1C4C3 as seed ortholog is 100%.

Group of orthologs #4032. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 G.gallus:161

F6PRN9              	100.00%		F1NG19              	100.00%
Bootstrap support for F6PRN9 as seed ortholog is 100%.
Bootstrap support for F1NG19 as seed ortholog is 100%.

Group of orthologs #4033. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 G.gallus:161

F6X4A0              	100.00%		F1NF80              	100.00%
Bootstrap support for F6X4A0 as seed ortholog is 100%.
Bootstrap support for F1NF80 as seed ortholog is 100%.

Group of orthologs #4034. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 G.gallus:161

F7B2D4              	100.00%		F1NUY6              	100.00%
Bootstrap support for F7B2D4 as seed ortholog is 100%.
Bootstrap support for F1NUY6 as seed ortholog is 100%.

Group of orthologs #4035. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 G.gallus:161

H2XY86              	100.00%		H9L1C4              	100.00%
Bootstrap support for H2XY86 as seed ortholog is 80%.
Bootstrap support for H9L1C4 as seed ortholog is 100%.

Group of orthologs #4036. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 G.gallus:161

Q1JV40              	100.00%		Q5F4C0              	100.00%
Bootstrap support for Q1JV40 as seed ortholog is 100%.
Bootstrap support for Q5F4C0 as seed ortholog is 100%.

Group of orthologs #4037. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:160

H2XMB9              	100.00%		E1BV48              	100.00%
                    	       		E1BQ71              	32.11%
                    	       		H9KZ54              	10.09%
Bootstrap support for H2XMB9 as seed ortholog is 100%.
Bootstrap support for E1BV48 as seed ortholog is 100%.

Group of orthologs #4038. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:160

H2XZB8              	100.00%		F1P0X9              	100.00%
                    	       		F1P1W6              	100.00%
                    	       		E1C883              	25.13%
Bootstrap support for H2XZB8 as seed ortholog is 98%.
Bootstrap support for F1P0X9 as seed ortholog is 100%.
Bootstrap support for F1P1W6 as seed ortholog is 100%.

Group of orthologs #4039. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:160

H2Y142              	100.00%		Q5F476              	100.00%
H2XX23              	95.07%		F1NDC5              	52.12%
Bootstrap support for H2Y142 as seed ortholog is 100%.
Bootstrap support for Q5F476 as seed ortholog is 100%.

Group of orthologs #4040. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:160

F6PZ91              	100.00%		F1NAH3              	100.00%
                    	       		F1NY70              	11.72%
Bootstrap support for F6PZ91 as seed ortholog is 100%.
Bootstrap support for F1NAH3 as seed ortholog is 100%.

Group of orthologs #4041. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 G.gallus:42

F6TU56              	100.00%		F1NRS2              	100.00%
F7AVD2              	100.00%		
Bootstrap support for F6TU56 as seed ortholog is 100%.
Bootstrap support for F7AVD2 as seed ortholog is 100%.
Bootstrap support for F1NRS2 as seed ortholog is 95%.

Group of orthologs #4042. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:83

F6ZIG5              	100.00%		F1NDT3              	100.00%
                    	       		P13590              	34.42%
Bootstrap support for F6ZIG5 as seed ortholog is 100%.
Bootstrap support for F1NDT3 as seed ortholog is 96%.

Group of orthologs #4043. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:160

F6VLH4              	100.00%		E1BZ92              	100.00%
                    	       		H9KYN6              	100.00%
Bootstrap support for F6VLH4 as seed ortholog is 100%.
Bootstrap support for E1BZ92 as seed ortholog is 100%.
Bootstrap support for H9KYN6 as seed ortholog is 100%.

Group of orthologs #4044. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:160

F6X5P6              	100.00%		F1P1G0              	100.00%
                    	       		H9KZJ9              	43.79%
Bootstrap support for F6X5P6 as seed ortholog is 100%.
Bootstrap support for F1P1G0 as seed ortholog is 100%.

Group of orthologs #4045. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:160

F6UXP7              	100.00%		E1BYD1              	100.00%
Bootstrap support for F6UXP7 as seed ortholog is 100%.
Bootstrap support for E1BYD1 as seed ortholog is 100%.

Group of orthologs #4046. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:48

F6Y0G1              	100.00%		F1NCL7              	100.00%
Bootstrap support for F6Y0G1 as seed ortholog is 100%.
Bootstrap support for F1NCL7 as seed ortholog is 33%.
Alternative seed ortholog is E1C586 (48 bits away from this cluster)

Group of orthologs #4047. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:160

F7BKJ3              	100.00%		E1C961              	100.00%
Bootstrap support for F7BKJ3 as seed ortholog is 100%.
Bootstrap support for E1C961 as seed ortholog is 100%.

Group of orthologs #4048. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:160

F6X3B3              	100.00%		F1NV91              	100.00%
Bootstrap support for F6X3B3 as seed ortholog is 100%.
Bootstrap support for F1NV91 as seed ortholog is 100%.

Group of orthologs #4049. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 G.gallus:69

H2XJL6              	100.00%		H9L0A5              	100.00%
Bootstrap support for H2XJL6 as seed ortholog is 99%.
Bootstrap support for H9L0A5 as seed ortholog is 99%.

Group of orthologs #4050. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 G.gallus:160

Q4H2P0              	100.00%		F1NNN6              	100.00%
Bootstrap support for Q4H2P0 as seed ortholog is 100%.
Bootstrap support for F1NNN6 as seed ortholog is 100%.

Group of orthologs #4051. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 G.gallus:160

H2XLM9              	100.00%		Q5F433              	100.00%
Bootstrap support for H2XLM9 as seed ortholog is 99%.
Bootstrap support for Q5F433 as seed ortholog is 100%.

Group of orthologs #4052. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 G.gallus:16

H2XKQ7              	100.00%		P49285              	100.00%
H2Y1F4              	16.41%		F1NEF4              	52.42%
                    	       		P51050              	52.06%
Bootstrap support for H2XKQ7 as seed ortholog is 92%.
Bootstrap support for P49285 as seed ortholog is 97%.

Group of orthologs #4053. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 G.gallus:159

H2XSN9              	100.00%		E1C2Z3              	100.00%
                    	       		O73884              	17.20%
Bootstrap support for H2XSN9 as seed ortholog is 100%.
Bootstrap support for E1C2Z3 as seed ortholog is 100%.

Group of orthologs #4054. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 G.gallus:159

F6WR70              	100.00%		E1BVH7              	100.00%
Bootstrap support for F6WR70 as seed ortholog is 99%.
Bootstrap support for E1BVH7 as seed ortholog is 100%.

Group of orthologs #4055. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 G.gallus:159

F6UN42              	100.00%		E1C6C1              	100.00%
Bootstrap support for F6UN42 as seed ortholog is 100%.
Bootstrap support for E1C6C1 as seed ortholog is 100%.

Group of orthologs #4056. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 G.gallus:27

F6V7G7              	100.00%		F1NIG7              	100.00%
Bootstrap support for F6V7G7 as seed ortholog is 100%.
Bootstrap support for F1NIG7 as seed ortholog is 97%.

Group of orthologs #4057. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 G.gallus:87

F6X555              	100.00%		F1NF36              	100.00%
Bootstrap support for F6X555 as seed ortholog is 100%.
Bootstrap support for F1NF36 as seed ortholog is 99%.

Group of orthologs #4058. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 G.gallus:159

H2XXH0              	100.00%		E1C239              	100.00%
Bootstrap support for H2XXH0 as seed ortholog is 100%.
Bootstrap support for E1C239 as seed ortholog is 100%.

Group of orthologs #4059. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 G.gallus:159

F6Y206              	100.00%		Q5ZMQ0              	100.00%
Bootstrap support for F6Y206 as seed ortholog is 100%.
Bootstrap support for Q5ZMQ0 as seed ortholog is 100%.

Group of orthologs #4060. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 G.gallus:159

Q1RQ12              	100.00%		F1NZ07              	100.00%
Bootstrap support for Q1RQ12 as seed ortholog is 100%.
Bootstrap support for F1NZ07 as seed ortholog is 100%.

Group of orthologs #4061. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:158

F6XKH4              	100.00%		E1C165              	100.00%
                    	       		F1NX81              	45.10%
                    	       		E1C3V1              	43.05%
Bootstrap support for F6XKH4 as seed ortholog is 100%.
Bootstrap support for E1C165 as seed ortholog is 100%.

Group of orthologs #4062. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:158

F6YHI5              	100.00%		F1NAY2              	100.00%
                    	       		F1NFB9              	43.80%
Bootstrap support for F6YHI5 as seed ortholog is 100%.
Bootstrap support for F1NAY2 as seed ortholog is 100%.

Group of orthologs #4063. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:158

F6Q0V4              	100.00%		Q5ZM13              	100.00%
                    	       		E1BW14              	41.10%
Bootstrap support for F6Q0V4 as seed ortholog is 100%.
Bootstrap support for Q5ZM13 as seed ortholog is 100%.

Group of orthologs #4064. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:158

H2XVK3              	100.00%		F1NVQ4              	100.00%
                    	       		F1NDQ3              	11.64%
Bootstrap support for H2XVK3 as seed ortholog is 100%.
Bootstrap support for F1NVQ4 as seed ortholog is 100%.

Group of orthologs #4065. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:158

H2XST1              	100.00%		Q45KJ4              	100.00%
                    	       		Q45KJ5              	31.06%
Bootstrap support for H2XST1 as seed ortholog is 100%.
Bootstrap support for Q45KJ4 as seed ortholog is 100%.

Group of orthologs #4066. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:158

F6Y7W5              	100.00%		F1NA04              	100.00%
Bootstrap support for F6Y7W5 as seed ortholog is 100%.
Bootstrap support for F1NA04 as seed ortholog is 100%.

Group of orthologs #4067. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:158

F6QSD6              	100.00%		F1P5H3              	100.00%
Bootstrap support for F6QSD6 as seed ortholog is 100%.
Bootstrap support for F1P5H3 as seed ortholog is 100%.

Group of orthologs #4068. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 G.gallus:14

F6ZET9              	100.00%		F1NIP1              	100.00%
Bootstrap support for F6ZET9 as seed ortholog is 55%.
Alternative seed ortholog is F6XMN3 (5 bits away from this cluster)
Bootstrap support for F1NIP1 as seed ortholog is 73%.
Alternative seed ortholog is E1C080 (14 bits away from this cluster)

Group of orthologs #4069. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:3

F6SST4              	100.00%		P00174              	100.00%
Bootstrap support for F6SST4 as seed ortholog is 100%.
Bootstrap support for P00174 as seed ortholog is 91%.

Group of orthologs #4070. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:158

F6Z8R5              	100.00%		F1NS03              	100.00%
Bootstrap support for F6Z8R5 as seed ortholog is 100%.
Bootstrap support for F1NS03 as seed ortholog is 100%.

Group of orthologs #4071. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 G.gallus:158

F6ZV18              	100.00%		Q8JIF5              	100.00%
Bootstrap support for F6ZV18 as seed ortholog is 100%.
Bootstrap support for Q8JIF5 as seed ortholog is 100%.

Group of orthologs #4072. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 G.gallus:157

F6VBR9              	100.00%		E1C6T0              	100.00%
                    	       		E1C7W9              	6.00%
Bootstrap support for F6VBR9 as seed ortholog is 100%.
Bootstrap support for E1C6T0 as seed ortholog is 100%.

Group of orthologs #4073. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 G.gallus:60

H2XRK5              	100.00%		E1BVA9              	100.00%
Bootstrap support for H2XRK5 as seed ortholog is 86%.
Bootstrap support for E1BVA9 as seed ortholog is 98%.

Group of orthologs #4074. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 G.gallus:157

F6YM72              	100.00%		F1NXD6              	100.00%
Bootstrap support for F6YM72 as seed ortholog is 100%.
Bootstrap support for F1NXD6 as seed ortholog is 100%.

Group of orthologs #4075. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 G.gallus:99

F6XEU0              	100.00%		F1P3Y0              	100.00%
Bootstrap support for F6XEU0 as seed ortholog is 100%.
Bootstrap support for F1P3Y0 as seed ortholog is 99%.

Group of orthologs #4076. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 G.gallus:157

F6Z867              	100.00%		H9KYV6              	100.00%
Bootstrap support for F6Z867 as seed ortholog is 100%.
Bootstrap support for H9KYV6 as seed ortholog is 100%.

Group of orthologs #4077. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 G.gallus:157

H2XM98              	100.00%		F1P4D5              	100.00%
Bootstrap support for H2XM98 as seed ortholog is 100%.
Bootstrap support for F1P4D5 as seed ortholog is 100%.

Group of orthologs #4078. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 G.gallus:99

H2XN19              	100.00%		Q5ZKW5              	100.00%
Bootstrap support for H2XN19 as seed ortholog is 100%.
Bootstrap support for Q5ZKW5 as seed ortholog is 100%.

Group of orthologs #4079. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 G.gallus:156

F6QP54              	100.00%		Q8JG30              	100.00%
H2XPA6              	10.21%		F1NMA2              	48.07%
                    	       		Q90WR6              	36.05%
Bootstrap support for F6QP54 as seed ortholog is 77%.
Bootstrap support for Q8JG30 as seed ortholog is 100%.

Group of orthologs #4080. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 G.gallus:156

H2XKK1              	100.00%		Q9PTL2              	100.00%
                    	       		F1NC24              	22.24%
                    	       		A0FK59              	18.18%
Bootstrap support for H2XKK1 as seed ortholog is 100%.
Bootstrap support for Q9PTL2 as seed ortholog is 100%.

Group of orthologs #4081. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:156

F6PRU7              	100.00%		E1BX51              	100.00%
H2Y0G4              	35.90%		
Bootstrap support for F6PRU7 as seed ortholog is 98%.
Bootstrap support for E1BX51 as seed ortholog is 100%.

Group of orthologs #4082. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 G.gallus:72

F6VJ60              	100.00%		Q5ZHZ5              	100.00%
                    	       		F1NZ54              	32.65%
Bootstrap support for F6VJ60 as seed ortholog is 100%.
Bootstrap support for Q5ZHZ5 as seed ortholog is 97%.

Group of orthologs #4083. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 G.gallus:156

F6QKK4              	100.00%		E1C7Y9              	100.00%
Bootstrap support for F6QKK4 as seed ortholog is 100%.
Bootstrap support for E1C7Y9 as seed ortholog is 100%.

Group of orthologs #4084. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 G.gallus:156

F6Z5N9              	100.00%		E1BT32              	100.00%
Bootstrap support for F6Z5N9 as seed ortholog is 100%.
Bootstrap support for E1BT32 as seed ortholog is 100%.

Group of orthologs #4085. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 G.gallus:156

F6SAD5              	100.00%		F1NCA1              	100.00%
Bootstrap support for F6SAD5 as seed ortholog is 100%.
Bootstrap support for F1NCA1 as seed ortholog is 100%.

Group of orthologs #4086. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 G.gallus:156

F7AD29              	100.00%		E1BUH1              	100.00%
Bootstrap support for F7AD29 as seed ortholog is 100%.
Bootstrap support for E1BUH1 as seed ortholog is 100%.

Group of orthologs #4087. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 G.gallus:156

F6PU23              	100.00%		F1P4G1              	100.00%
Bootstrap support for F6PU23 as seed ortholog is 100%.
Bootstrap support for F1P4G1 as seed ortholog is 100%.

Group of orthologs #4088. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 G.gallus:156

F6TDH1              	100.00%		F1NVE2              	100.00%
Bootstrap support for F6TDH1 as seed ortholog is 100%.
Bootstrap support for F1NVE2 as seed ortholog is 100%.

Group of orthologs #4089. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 G.gallus:156

H2Y0C3              	100.00%		E1BT25              	100.00%
Bootstrap support for H2Y0C3 as seed ortholog is 100%.
Bootstrap support for E1BT25 as seed ortholog is 100%.

Group of orthologs #4090. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 G.gallus:156

F6X832              	100.00%		F1NZC4              	100.00%
Bootstrap support for F6X832 as seed ortholog is 100%.
Bootstrap support for F1NZC4 as seed ortholog is 100%.

Group of orthologs #4091. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 G.gallus:156

F6SIM0              	100.00%		Q5F349              	100.00%
Bootstrap support for F6SIM0 as seed ortholog is 81%.
Bootstrap support for Q5F349 as seed ortholog is 100%.

Group of orthologs #4092. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 G.gallus:156

F6URT4              	100.00%		Q5ZJS2              	100.00%
Bootstrap support for F6URT4 as seed ortholog is 100%.
Bootstrap support for Q5ZJS2 as seed ortholog is 100%.

Group of orthologs #4093. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 G.gallus:156

F6X8B5              	100.00%		Q5ZMC5              	100.00%
Bootstrap support for F6X8B5 as seed ortholog is 100%.
Bootstrap support for Q5ZMC5 as seed ortholog is 100%.

Group of orthologs #4094. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 G.gallus:65

F6Z1X1              	100.00%		F1NIZ4              	100.00%
F6Z1X8              	100.00%		F1NZ08              	100.00%
F7BHU7              	100.00%		F1NP40              	100.00%
                    	       		F1NVU2              	25.34%
Bootstrap support for F6Z1X1 as seed ortholog is 92%.
Bootstrap support for F6Z1X8 as seed ortholog is 78%.
Bootstrap support for F7BHU7 as seed ortholog is 69%.
Alternative seed ortholog is H2Y3A4 (66 bits away from this cluster)
Bootstrap support for F1NIZ4 as seed ortholog is 94%.
Bootstrap support for F1NZ08 as seed ortholog is 92%.
Bootstrap support for F1NP40 as seed ortholog is 92%.

Group of orthologs #4095. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 G.gallus:109

F7AUP3              	100.00%		E1BX85              	100.00%
F7AY96              	87.72%		
F7AV59              	61.11%		
L7N0S5              	56.14%		
F6ZYU1              	36.55%		
Bootstrap support for F7AUP3 as seed ortholog is 99%.
Bootstrap support for E1BX85 as seed ortholog is 100%.

Group of orthologs #4096. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 G.gallus:155

F6QUI4              	100.00%		E1C6W9              	100.00%
                    	       		F1NMX3              	47.79%
Bootstrap support for F6QUI4 as seed ortholog is 100%.
Bootstrap support for E1C6W9 as seed ortholog is 100%.

Group of orthologs #4097. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 G.gallus:155

H2XWG7              	100.00%		E1BU24              	100.00%
Bootstrap support for H2XWG7 as seed ortholog is 100%.
Bootstrap support for E1BU24 as seed ortholog is 100%.

Group of orthologs #4098. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 G.gallus:155

H2XJV1              	100.00%		F1NYE4              	100.00%
Bootstrap support for H2XJV1 as seed ortholog is 100%.
Bootstrap support for F1NYE4 as seed ortholog is 100%.

Group of orthologs #4099. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 G.gallus:72

H2XZH8              	100.00%		Q5ZLR2              	100.00%
Bootstrap support for H2XZH8 as seed ortholog is 88%.
Bootstrap support for Q5ZLR2 as seed ortholog is 99%.

Group of orthologs #4100. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 G.gallus:154

F7AKQ9              	100.00%		E1BXX9              	100.00%
F6U0A7              	11.97%		E1BQC5              	11.18%
Bootstrap support for F7AKQ9 as seed ortholog is 89%.
Bootstrap support for E1BXX9 as seed ortholog is 100%.

Group of orthologs #4101. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 G.gallus:59

H2XWE8              	100.00%		E1C944              	100.00%
                    	       		F1N992              	17.11%
Bootstrap support for H2XWE8 as seed ortholog is 100%.
Bootstrap support for E1C944 as seed ortholog is 96%.

Group of orthologs #4102. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:154

F6W3V6              	100.00%		E1BV45              	100.00%
Bootstrap support for F6W3V6 as seed ortholog is 99%.
Bootstrap support for E1BV45 as seed ortholog is 100%.

Group of orthologs #4103. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 G.gallus:154

F6SCJ9              	100.00%		E1C716              	100.00%
Bootstrap support for F6SCJ9 as seed ortholog is 100%.
Bootstrap support for E1C716 as seed ortholog is 100%.

Group of orthologs #4104. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 G.gallus:154

F6R2C6              	100.00%		F1NU56              	100.00%
Bootstrap support for F6R2C6 as seed ortholog is 100%.
Bootstrap support for F1NU56 as seed ortholog is 100%.

Group of orthologs #4105. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 G.gallus:154

F6ZJ92              	100.00%		E1C475              	100.00%
Bootstrap support for F6ZJ92 as seed ortholog is 100%.
Bootstrap support for E1C475 as seed ortholog is 100%.

Group of orthologs #4106. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 G.gallus:154

F6VR85              	100.00%		F1NG77              	100.00%
Bootstrap support for F6VR85 as seed ortholog is 100%.
Bootstrap support for F1NG77 as seed ortholog is 100%.

Group of orthologs #4107. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 G.gallus:154

F6S714              	100.00%		F1NWG9              	100.00%
Bootstrap support for F6S714 as seed ortholog is 83%.
Bootstrap support for F1NWG9 as seed ortholog is 100%.

Group of orthologs #4108. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 G.gallus:154

H2XRE8              	100.00%		E1BWN5              	100.00%
Bootstrap support for H2XRE8 as seed ortholog is 98%.
Bootstrap support for E1BWN5 as seed ortholog is 100%.

Group of orthologs #4109. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 G.gallus:154

F6T2G1              	100.00%		P35608              	100.00%
Bootstrap support for F6T2G1 as seed ortholog is 100%.
Bootstrap support for P35608 as seed ortholog is 100%.

Group of orthologs #4110. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 G.gallus:154

H2Y3H8              	100.00%		F1NIQ8              	100.00%
Bootstrap support for H2Y3H8 as seed ortholog is 100%.
Bootstrap support for F1NIQ8 as seed ortholog is 100%.

Group of orthologs #4111. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 G.gallus:154

Q1RL33              	100.00%		F1P4M3              	100.00%
Bootstrap support for Q1RL33 as seed ortholog is 100%.
Bootstrap support for F1P4M3 as seed ortholog is 100%.

Group of orthologs #4112. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 G.gallus:45

H2XV84              	100.00%		H9KZW8              	100.00%
H2XXQ3              	52.94%		
F6VE11              	28.19%		
F7ALN9              	22.06%		
F6XYN0              	16.91%		
F6UNK6              	16.42%		
F6TND9              	12.50%		
F6ZWV2              	10.05%		
F7A859              	10.05%		
F6YCK1              	7.84%		
Bootstrap support for H2XV84 as seed ortholog is 65%.
Alternative seed ortholog is F6WVM4 (14 bits away from this cluster)
Bootstrap support for H9KZW8 as seed ortholog is 96%.

Group of orthologs #4113. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 G.gallus:153

F6SQC0              	100.00%		E1C1X8              	100.00%
                    	       		Q5ZKZ9              	10.38%
Bootstrap support for F6SQC0 as seed ortholog is 100%.
Bootstrap support for E1C1X8 as seed ortholog is 100%.

Group of orthologs #4114. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 G.gallus:153

H2XN72              	100.00%		E1BSA4              	100.00%
                    	       		F1NG88              	16.95%
Bootstrap support for H2XN72 as seed ortholog is 97%.
Bootstrap support for E1BSA4 as seed ortholog is 100%.

Group of orthologs #4115. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 G.gallus:18

F7A7X6              	100.00%		F1NTL8              	100.00%
                    	       		F1NH94              	23.61%
Bootstrap support for F7A7X6 as seed ortholog is 100%.
Bootstrap support for F1NTL8 as seed ortholog is 96%.

Group of orthologs #4116. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 G.gallus:80

F6QMN2              	100.00%		E1C120              	100.00%
Bootstrap support for F6QMN2 as seed ortholog is 100%.
Bootstrap support for E1C120 as seed ortholog is 99%.

Group of orthologs #4117. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 G.gallus:153

F6WCS0              	100.00%		E1BVF1              	100.00%
Bootstrap support for F6WCS0 as seed ortholog is 100%.
Bootstrap support for E1BVF1 as seed ortholog is 100%.

Group of orthologs #4118. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 G.gallus:153

F7BPA9              	100.00%		E1BWL8              	100.00%
Bootstrap support for F7BPA9 as seed ortholog is 100%.
Bootstrap support for E1BWL8 as seed ortholog is 100%.

Group of orthologs #4119. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 G.gallus:153

H2XL05              	100.00%		E1BZ75              	100.00%
Bootstrap support for H2XL05 as seed ortholog is 100%.
Bootstrap support for E1BZ75 as seed ortholog is 100%.

Group of orthologs #4120. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 G.gallus:10

F6TMF8              	100.00%		F1NSN0              	100.00%
Bootstrap support for F6TMF8 as seed ortholog is 80%.
Bootstrap support for F1NSN0 as seed ortholog is 62%.
Alternative seed ortholog is F1NKQ3 (10 bits away from this cluster)

Group of orthologs #4121. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 G.gallus:153

F6Q318              	100.00%		Q8QG58              	100.00%
Bootstrap support for F6Q318 as seed ortholog is 100%.
Bootstrap support for Q8QG58 as seed ortholog is 100%.

Group of orthologs #4122. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 G.gallus:153

F6YZ79              	100.00%		F1NWN8              	100.00%
Bootstrap support for F6YZ79 as seed ortholog is 100%.
Bootstrap support for F1NWN8 as seed ortholog is 100%.

Group of orthologs #4123. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 G.gallus:153

H2XXS3              	100.00%		F1NBA7              	100.00%
Bootstrap support for H2XXS3 as seed ortholog is 100%.
Bootstrap support for F1NBA7 as seed ortholog is 100%.

Group of orthologs #4124. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 G.gallus:153

Q1RLC9              	100.00%		E1C6F0              	100.00%
Bootstrap support for Q1RLC9 as seed ortholog is 100%.
Bootstrap support for E1C6F0 as seed ortholog is 100%.

Group of orthologs #4125. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 G.gallus:153

F7B6K5              	100.00%		F1P2Q9              	100.00%
Bootstrap support for F7B6K5 as seed ortholog is 100%.
Bootstrap support for F1P2Q9 as seed ortholog is 100%.

Group of orthologs #4126. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 G.gallus:152

H2XQR2              	100.00%		E1C7W7              	100.00%
F6Y516              	24.32%		
F6V2S0              	15.83%		
F6SZN1              	10.81%		
Bootstrap support for H2XQR2 as seed ortholog is 100%.
Bootstrap support for E1C7W7 as seed ortholog is 100%.

Group of orthologs #4127. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 G.gallus:152

F6VI88              	100.00%		E1C1Z5              	100.00%
Bootstrap support for F6VI88 as seed ortholog is 100%.
Bootstrap support for E1C1Z5 as seed ortholog is 100%.

Group of orthologs #4128. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 G.gallus:152

F6QJB1              	100.00%		F1NET6              	100.00%
Bootstrap support for F6QJB1 as seed ortholog is 100%.
Bootstrap support for F1NET6 as seed ortholog is 100%.

Group of orthologs #4129. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 G.gallus:62

F6UBE7              	100.00%		F1NL81              	100.00%
Bootstrap support for F6UBE7 as seed ortholog is 85%.
Bootstrap support for F1NL81 as seed ortholog is 96%.

Group of orthologs #4130. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 G.gallus:152

F6ZPZ7              	100.00%		E1C640              	100.00%
Bootstrap support for F6ZPZ7 as seed ortholog is 100%.
Bootstrap support for E1C640 as seed ortholog is 100%.

Group of orthologs #4131. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 G.gallus:152

F6RMZ6              	100.00%		Q5ZHW7              	100.00%
Bootstrap support for F6RMZ6 as seed ortholog is 100%.
Bootstrap support for Q5ZHW7 as seed ortholog is 100%.

Group of orthologs #4132. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 G.gallus:152

F6TQZ3              	100.00%		Q5ZMK7              	100.00%
Bootstrap support for F6TQZ3 as seed ortholog is 100%.
Bootstrap support for Q5ZMK7 as seed ortholog is 100%.

Group of orthologs #4133. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:82

F6YIG5              	100.00%		Q5ZIF5              	100.00%
Bootstrap support for F6YIG5 as seed ortholog is 99%.
Bootstrap support for Q5ZIF5 as seed ortholog is 99%.

Group of orthologs #4134. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:151

Q4H394              	100.00%		O42290              	100.00%
                    	       		Q90888              	38.74%
                    	       		Q789F3              	35.14%
Bootstrap support for Q4H394 as seed ortholog is 100%.
Bootstrap support for O42290 as seed ortholog is 100%.

Group of orthologs #4135. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 G.gallus:151

F7B963              	100.00%		E1C6V1              	100.00%
F6PI53              	58.46%		
Bootstrap support for F7B963 as seed ortholog is 90%.
Bootstrap support for E1C6V1 as seed ortholog is 100%.

Group of orthologs #4136. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:151

F6T9S9              	100.00%		P01109              	100.00%
                    	       		P18444              	18.69%
Bootstrap support for F6T9S9 as seed ortholog is 100%.
Bootstrap support for P01109 as seed ortholog is 100%.

Group of orthologs #4137. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:151

F7B7K2              	100.00%		Q98TF6              	100.00%
                    	       		F1NP48              	21.67%
Bootstrap support for F7B7K2 as seed ortholog is 100%.
Bootstrap support for Q98TF6 as seed ortholog is 100%.

Group of orthologs #4138. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:151

F6VB34              	100.00%		E1C5L4              	100.00%
Bootstrap support for F6VB34 as seed ortholog is 100%.
Bootstrap support for E1C5L4 as seed ortholog is 100%.

Group of orthologs #4139. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:151

F6UTH5              	100.00%		E1C8C1              	100.00%
Bootstrap support for F6UTH5 as seed ortholog is 100%.
Bootstrap support for E1C8C1 as seed ortholog is 100%.

Group of orthologs #4140. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:151

F7AIJ0              	100.00%		E1C3T8              	100.00%
Bootstrap support for F7AIJ0 as seed ortholog is 100%.
Bootstrap support for E1C3T8 as seed ortholog is 100%.

Group of orthologs #4141. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:151

H2Y0H7              	100.00%		E1BXK2              	100.00%
Bootstrap support for H2Y0H7 as seed ortholog is 100%.
Bootstrap support for E1BXK2 as seed ortholog is 100%.

Group of orthologs #4142. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:77

H2XSA5              	100.00%		E1C8T5              	100.00%
Bootstrap support for H2XSA5 as seed ortholog is 100%.
Bootstrap support for E1C8T5 as seed ortholog is 100%.

Group of orthologs #4143. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 G.gallus:60

F7A552              	100.00%		F1NWY9              	100.00%
Bootstrap support for F7A552 as seed ortholog is 97%.
Bootstrap support for F1NWY9 as seed ortholog is 97%.

Group of orthologs #4144. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:151

Q1RL87              	100.00%		E1C263              	100.00%
Bootstrap support for Q1RL87 as seed ortholog is 100%.
Bootstrap support for E1C263 as seed ortholog is 100%.

Group of orthologs #4145. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:109

H2XM57              	100.00%		F1NZH2              	100.00%
Bootstrap support for H2XM57 as seed ortholog is 100%.
Bootstrap support for F1NZH2 as seed ortholog is 99%.

Group of orthologs #4146. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 G.gallus:151

H2XQX9              	100.00%		H9L345              	100.00%
Bootstrap support for H2XQX9 as seed ortholog is 100%.
Bootstrap support for H9L345 as seed ortholog is 100%.

Group of orthologs #4147. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 G.gallus:150

F6XPV2              	100.00%		E1BRX6              	100.00%
                    	       		E1C6P6              	5.52%
Bootstrap support for F6XPV2 as seed ortholog is 100%.
Bootstrap support for E1BRX6 as seed ortholog is 100%.

Group of orthologs #4148. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 G.gallus:150

F6RM26              	100.00%		F1NIU5              	100.00%
Bootstrap support for F6RM26 as seed ortholog is 100%.
Bootstrap support for F1NIU5 as seed ortholog is 100%.

Group of orthologs #4149. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 G.gallus:150

F6W8Z2              	100.00%		F1NDH4              	100.00%
Bootstrap support for F6W8Z2 as seed ortholog is 100%.
Bootstrap support for F1NDH4 as seed ortholog is 100%.

Group of orthologs #4150. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 G.gallus:86

F6Y3J4              	100.00%		F1NA56              	100.00%
Bootstrap support for F6Y3J4 as seed ortholog is 93%.
Bootstrap support for F1NA56 as seed ortholog is 99%.

Group of orthologs #4151. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 G.gallus:85

H2Y0G1              	100.00%		P10741              	100.00%
Bootstrap support for H2Y0G1 as seed ortholog is 91%.
Bootstrap support for P10741 as seed ortholog is 97%.

Group of orthologs #4152. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 G.gallus:19

F6TTN6              	100.00%		E1BT51              	100.00%
F7AY51              	35.53%		E1BVM3              	37.50%
F6T788              	28.62%		
Bootstrap support for F6TTN6 as seed ortholog is 87%.
Bootstrap support for E1BT51 as seed ortholog is 67%.
Alternative seed ortholog is F1NBL2 (19 bits away from this cluster)

Group of orthologs #4153. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 G.gallus:149

F6QH11              	100.00%		F1NIQ2              	100.00%
                    	       		F1NTQ3              	49.90%
                    	       		F1NY83              	8.42%
Bootstrap support for F6QH11 as seed ortholog is 92%.
Bootstrap support for F1NIQ2 as seed ortholog is 100%.

Group of orthologs #4154. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 G.gallus:149

F6W2W8              	100.00%		F1NF12              	100.00%
                    	       		F1NYR8              	39.52%
                    	       		Q90813              	35.09%
Bootstrap support for F6W2W8 as seed ortholog is 100%.
Bootstrap support for F1NF12 as seed ortholog is 100%.

Group of orthologs #4155. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 G.gallus:149

F6RDW1              	100.00%		O73888              	100.00%
F6VQ32              	8.49%		
F6T5Q1              	7.34%		
Bootstrap support for F6RDW1 as seed ortholog is 79%.
Bootstrap support for O73888 as seed ortholog is 100%.

Group of orthologs #4156. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 G.gallus:149

F6VPV7              	100.00%		F1NM14              	100.00%
Bootstrap support for F6VPV7 as seed ortholog is 99%.
Bootstrap support for F1NM14 as seed ortholog is 100%.

Group of orthologs #4157. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 G.gallus:149

F7B5G8              	100.00%		F1NAS9              	100.00%
Bootstrap support for F7B5G8 as seed ortholog is 100%.
Bootstrap support for F1NAS9 as seed ortholog is 100%.

Group of orthologs #4158. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 G.gallus:149

H2XKP6              	100.00%		F1NTC7              	100.00%
Bootstrap support for H2XKP6 as seed ortholog is 100%.
Bootstrap support for F1NTC7 as seed ortholog is 100%.

Group of orthologs #4159. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 G.gallus:149

F7A7T2              	100.00%		P19966              	100.00%
Bootstrap support for F7A7T2 as seed ortholog is 100%.
Bootstrap support for P19966 as seed ortholog is 100%.

Group of orthologs #4160. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 G.gallus:148

F6Y7J1              	100.00%		E1BRF0              	100.00%
F6SAU0              	39.89%		F1NPD1              	42.57%
F6ZNT5              	24.49%		F1NUZ4              	35.64%
F6ZAA5              	20.78%		E1BZH2              	7.54%
F6XHN7              	19.67%		
F6ZYZ9              	16.88%		
F6ZNS9              	16.70%		
F6XHS1              	13.36%		
F6SQW0              	10.95%		
H2Y2F5              	7.42%		
Bootstrap support for F6Y7J1 as seed ortholog is 85%.
Bootstrap support for E1BRF0 as seed ortholog is 100%.

Group of orthologs #4161. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 G.gallus:19

F8WQ81              	100.00%		F1N9U6              	100.00%
F7A2L3              	6.51%		E1BZU2              	31.85%
H2XXT4              	5.21%		F1NBI0              	26.00%
Bootstrap support for F8WQ81 as seed ortholog is 80%.
Bootstrap support for F1N9U6 as seed ortholog is 73%.
Alternative seed ortholog is Q98ST6 (19 bits away from this cluster)

Group of orthologs #4162. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 G.gallus:148

F7BE41              	100.00%		E1BT20              	100.00%
                    	       		F1NSA0              	19.96%
Bootstrap support for F7BE41 as seed ortholog is 100%.
Bootstrap support for E1BT20 as seed ortholog is 100%.

Group of orthologs #4163. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 G.gallus:35

F6WW36              	100.00%		F1NYK6              	100.00%
H2XRG7              	19.27%		
Bootstrap support for F6WW36 as seed ortholog is 91%.
Bootstrap support for F1NYK6 as seed ortholog is 86%.

Group of orthologs #4164. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 G.gallus:148

F6UXC1              	100.00%		E1BWM3              	100.00%
Bootstrap support for F6UXC1 as seed ortholog is 100%.
Bootstrap support for E1BWM3 as seed ortholog is 100%.

Group of orthologs #4165. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 G.gallus:148

F6S5F0              	100.00%		F1N9L8              	100.00%
Bootstrap support for F6S5F0 as seed ortholog is 100%.
Bootstrap support for F1N9L8 as seed ortholog is 100%.

Group of orthologs #4166. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 G.gallus:148

F7BKI1              	100.00%		E1C083              	100.00%
Bootstrap support for F7BKI1 as seed ortholog is 100%.
Bootstrap support for E1C083 as seed ortholog is 100%.

Group of orthologs #4167. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 G.gallus:148

F6PZM1              	100.00%		F1P304              	100.00%
Bootstrap support for F6PZM1 as seed ortholog is 100%.
Bootstrap support for F1P304 as seed ortholog is 100%.

Group of orthologs #4168. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 G.gallus:148

H2XTQ3              	100.00%		E1C5A2              	100.00%
Bootstrap support for H2XTQ3 as seed ortholog is 100%.
Bootstrap support for E1C5A2 as seed ortholog is 100%.

Group of orthologs #4169. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 G.gallus:148

H2XP53              	100.00%		F1NDD4              	100.00%
Bootstrap support for H2XP53 as seed ortholog is 100%.
Bootstrap support for F1NDD4 as seed ortholog is 100%.

Group of orthologs #4170. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 G.gallus:148

H2Y0T0              	100.00%		F1NDZ0              	100.00%
Bootstrap support for H2Y0T0 as seed ortholog is 100%.
Bootstrap support for F1NDZ0 as seed ortholog is 100%.

Group of orthologs #4171. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 G.gallus:90

F7A5D0              	100.00%		P15771              	100.00%
Bootstrap support for F7A5D0 as seed ortholog is 99%.
Bootstrap support for P15771 as seed ortholog is 99%.

Group of orthologs #4172. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 G.gallus:148

H2XZF3              	100.00%		F1P024              	100.00%
Bootstrap support for H2XZF3 as seed ortholog is 100%.
Bootstrap support for F1P024 as seed ortholog is 100%.

Group of orthologs #4173. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 G.gallus:148

H2XUX4              	100.00%		Q90964              	100.00%
Bootstrap support for H2XUX4 as seed ortholog is 76%.
Bootstrap support for Q90964 as seed ortholog is 100%.

Group of orthologs #4174. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 G.gallus:147

F6QIE7              	100.00%		F1NMI7              	100.00%
F6V386              	100.00%		E1BR90              	13.64%
Bootstrap support for F6QIE7 as seed ortholog is 75%.
Bootstrap support for F6V386 as seed ortholog is 75%.
Bootstrap support for F1NMI7 as seed ortholog is 100%.

Group of orthologs #4175. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 G.gallus:147

F7A9H5              	100.00%		E1C6P4              	100.00%
                    	       		F1NRY4              	24.23%
                    	       		E1BR14              	22.18%
Bootstrap support for F7A9H5 as seed ortholog is 62%.
Alternative seed ortholog is H2XUF7 (9 bits away from this cluster)
Bootstrap support for E1C6P4 as seed ortholog is 100%.

Group of orthologs #4176. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 G.gallus:147

F6URY8              	100.00%		E1C762              	100.00%
Bootstrap support for F6URY8 as seed ortholog is 100%.
Bootstrap support for E1C762 as seed ortholog is 100%.

Group of orthologs #4177. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 G.gallus:147

F6T0B7              	100.00%		H9L1A3              	100.00%
Bootstrap support for F6T0B7 as seed ortholog is 93%.
Bootstrap support for H9L1A3 as seed ortholog is 100%.

Group of orthologs #4178. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 G.gallus:59

F7AZ78              	100.00%		F1NMW9              	100.00%
Bootstrap support for F7AZ78 as seed ortholog is 99%.
Bootstrap support for F1NMW9 as seed ortholog is 99%.

Group of orthologs #4179. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 G.gallus:147

F6UPP6              	100.00%		Q800L3              	100.00%
Bootstrap support for F6UPP6 as seed ortholog is 100%.
Bootstrap support for Q800L3 as seed ortholog is 100%.

Group of orthologs #4180. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 G.gallus:147

F6YFR8              	100.00%		H9L1M1              	100.00%
Bootstrap support for F6YFR8 as seed ortholog is 100%.
Bootstrap support for H9L1M1 as seed ortholog is 100%.

Group of orthologs #4181. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 G.gallus:147

F7AVQ6              	100.00%		H9KZZ6              	100.00%
Bootstrap support for F7AVQ6 as seed ortholog is 100%.
Bootstrap support for H9KZZ6 as seed ortholog is 100%.

Group of orthologs #4182. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 G.gallus:146

F6RGU6              	100.00%		F1P240              	100.00%
F6RGC9              	22.36%		F1P3R6              	7.67%
F6RBY6              	11.11%		
F6VLS5              	5.14%		
Bootstrap support for F6RGU6 as seed ortholog is 100%.
Bootstrap support for F1P240 as seed ortholog is 100%.

Group of orthologs #4183. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 G.gallus:146

F6YHY7              	100.00%		F1NFM5              	100.00%
                    	       		F1NZC3              	43.60%
                    	       		F1NMR3              	41.72%
Bootstrap support for F6YHY7 as seed ortholog is 100%.
Bootstrap support for F1NFM5 as seed ortholog is 100%.

Group of orthologs #4184. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 G.gallus:53

H2XTC9              	100.00%		Q5ZJM9              	100.00%
                    	       		Q5ZHQ1              	70.00%
Bootstrap support for H2XTC9 as seed ortholog is 100%.
Bootstrap support for Q5ZJM9 as seed ortholog is 99%.

Group of orthologs #4185. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 G.gallus:146

F6WHY6              	100.00%		F1NYD4              	100.00%
Bootstrap support for F6WHY6 as seed ortholog is 100%.
Bootstrap support for F1NYD4 as seed ortholog is 100%.

Group of orthologs #4186. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 G.gallus:146

F6ZQH5              	100.00%		F1NQ74              	100.00%
Bootstrap support for F6ZQH5 as seed ortholog is 100%.
Bootstrap support for F1NQ74 as seed ortholog is 100%.

Group of orthologs #4187. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 G.gallus:145

F6WKI5              	100.00%		F1NSR8              	100.00%
F6WA11              	20.05%		
Bootstrap support for F6WKI5 as seed ortholog is 100%.
Bootstrap support for F1NSR8 as seed ortholog is 100%.

Group of orthologs #4188. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 G.gallus:52

F6YRU0              	100.00%		P35431              	100.00%
                    	       		F1N825              	38.57%
Bootstrap support for F6YRU0 as seed ortholog is 88%.
Bootstrap support for P35431 as seed ortholog is 98%.

Group of orthologs #4189. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 G.gallus:145

F7AMQ2              	100.00%		F1NET8              	100.00%
Bootstrap support for F7AMQ2 as seed ortholog is 100%.
Bootstrap support for F1NET8 as seed ortholog is 100%.

Group of orthologs #4190. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 G.gallus:145

F6U5E5              	100.00%		O13113              	100.00%
Bootstrap support for F6U5E5 as seed ortholog is 100%.
Bootstrap support for O13113 as seed ortholog is 100%.

Group of orthologs #4191. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 G.gallus:145

Q4H3N8              	100.00%		F1NF04              	100.00%
Bootstrap support for Q4H3N8 as seed ortholog is 100%.
Bootstrap support for F1NF04 as seed ortholog is 100%.

Group of orthologs #4192. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:6

F6VM90              	100.00%		E1C3Y3              	100.00%
F6V276              	9.92%		
F6V166              	9.92%		
F6V0K9              	5.09%		
Bootstrap support for F6VM90 as seed ortholog is 96%.
Bootstrap support for E1C3Y3 as seed ortholog is 42%.
Alternative seed ortholog is Q9IBC9 (6 bits away from this cluster)

Group of orthologs #4193. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 G.gallus:36

F6SU68              	100.00%		Q05423              	100.00%
                    	       		F1NUQ3              	13.49%
                    	       		F1NDE7              	12.70%
                    	       		F1NEK1              	10.32%
Bootstrap support for F6SU68 as seed ortholog is 96%.
Bootstrap support for Q05423 as seed ortholog is 97%.

Group of orthologs #4194. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 G.gallus:144

F6V8N0              	100.00%		E1BXI0              	100.00%
H2Y092              	8.80%		
Bootstrap support for F6V8N0 as seed ortholog is 98%.
Bootstrap support for E1BXI0 as seed ortholog is 100%.

Group of orthologs #4195. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 G.gallus:30

F6TT30              	100.00%		E1BXJ1              	100.00%
Bootstrap support for F6TT30 as seed ortholog is 100%.
Bootstrap support for E1BXJ1 as seed ortholog is 79%.

Group of orthologs #4196. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 G.gallus:144

F6UFU8              	100.00%		E1C201              	100.00%
Bootstrap support for F6UFU8 as seed ortholog is 100%.
Bootstrap support for E1C201 as seed ortholog is 100%.

Group of orthologs #4197. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 G.gallus:144

F6YE24              	100.00%		E1BSA2              	100.00%
Bootstrap support for F6YE24 as seed ortholog is 100%.
Bootstrap support for E1BSA2 as seed ortholog is 100%.

Group of orthologs #4198. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 G.gallus:144

F6S4X9              	100.00%		F1NF38              	100.00%
Bootstrap support for F6S4X9 as seed ortholog is 100%.
Bootstrap support for F1NF38 as seed ortholog is 100%.

Group of orthologs #4199. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 G.gallus:144

F7AB05              	100.00%		E1C9C9              	100.00%
Bootstrap support for F7AB05 as seed ortholog is 100%.
Bootstrap support for E1C9C9 as seed ortholog is 100%.

Group of orthologs #4200. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 G.gallus:144

H2XU70              	100.00%		E1C1C6              	100.00%
Bootstrap support for H2XU70 as seed ortholog is 100%.
Bootstrap support for E1C1C6 as seed ortholog is 100%.

Group of orthologs #4201. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 G.gallus:144

Q1RLI5              	100.00%		E1BRY3              	100.00%
Bootstrap support for Q1RLI5 as seed ortholog is 100%.
Bootstrap support for E1BRY3 as seed ortholog is 100%.

Group of orthologs #4202. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 G.gallus:144

F7BD80              	100.00%		F1NP77              	100.00%
Bootstrap support for F7BD80 as seed ortholog is 100%.
Bootstrap support for F1NP77 as seed ortholog is 100%.

Group of orthologs #4203. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 G.gallus:97

F6Z3A0              	100.00%		P20135              	100.00%
Bootstrap support for F6Z3A0 as seed ortholog is 98%.
Bootstrap support for P20135 as seed ortholog is 99%.

Group of orthologs #4204. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 G.gallus:144

H2XJN8              	100.00%		O42283              	100.00%
Bootstrap support for H2XJN8 as seed ortholog is 100%.
Bootstrap support for O42283 as seed ortholog is 100%.

Group of orthologs #4205. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 G.gallus:144

H2Y2F7              	100.00%		F1NPQ7              	100.00%
Bootstrap support for H2Y2F7 as seed ortholog is 100%.
Bootstrap support for F1NPQ7 as seed ortholog is 100%.

Group of orthologs #4206. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:143

F6UJ88              	100.00%		F8RT80              	100.00%
                    	       		H9KZH8              	53.52%
Bootstrap support for F6UJ88 as seed ortholog is 100%.
Bootstrap support for F8RT80 as seed ortholog is 100%.

Group of orthologs #4207. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:143

F7BL63              	100.00%		F1NPC6              	100.00%
                    	       		F1NNE2              	30.28%
Bootstrap support for F7BL63 as seed ortholog is 100%.
Bootstrap support for F1NPC6 as seed ortholog is 100%.

Group of orthologs #4208. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:143

H2XW37              	100.00%		F1NP44              	100.00%
                    	       		F1NM52              	19.53%
Bootstrap support for H2XW37 as seed ortholog is 100%.
Bootstrap support for F1NP44 as seed ortholog is 100%.

Group of orthologs #4209. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:143

F6SXS9              	100.00%		F1NDJ4              	100.00%
Bootstrap support for F6SXS9 as seed ortholog is 100%.
Bootstrap support for F1NDJ4 as seed ortholog is 100%.

Group of orthologs #4210. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:143

F6U7R3              	100.00%		F1NJT6              	100.00%
Bootstrap support for F6U7R3 as seed ortholog is 100%.
Bootstrap support for F1NJT6 as seed ortholog is 100%.

Group of orthologs #4211. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:143

F7BA51              	100.00%		E1C2Q4              	100.00%
Bootstrap support for F7BA51 as seed ortholog is 100%.
Bootstrap support for E1C2Q4 as seed ortholog is 100%.

Group of orthologs #4212. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:143

F6XUE2              	100.00%		F1NJQ4              	100.00%
Bootstrap support for F6XUE2 as seed ortholog is 100%.
Bootstrap support for F1NJQ4 as seed ortholog is 100%.

Group of orthologs #4213. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:83

F6TPM4              	100.00%		F1P2U4              	100.00%
Bootstrap support for F6TPM4 as seed ortholog is 100%.
Bootstrap support for F1P2U4 as seed ortholog is 99%.

Group of orthologs #4214. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:143

F6UBQ5              	100.00%		F1P189              	100.00%
Bootstrap support for F6UBQ5 as seed ortholog is 100%.
Bootstrap support for F1P189 as seed ortholog is 100%.

Group of orthologs #4215. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 G.gallus:143

F7BJL5              	100.00%		F1NII8              	100.00%
Bootstrap support for F7BJL5 as seed ortholog is 82%.
Bootstrap support for F1NII8 as seed ortholog is 100%.

Group of orthologs #4216. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:143

F6TJ31              	100.00%		Q5ZJC8              	100.00%
Bootstrap support for F6TJ31 as seed ortholog is 100%.
Bootstrap support for Q5ZJC8 as seed ortholog is 100%.

Group of orthologs #4217. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:143

H2XUJ2              	100.00%		F1NKK5              	100.00%
Bootstrap support for H2XUJ2 as seed ortholog is 100%.
Bootstrap support for F1NKK5 as seed ortholog is 100%.

Group of orthologs #4218. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:14

F6YVB6              	100.00%		Q5ZJ73              	100.00%
Bootstrap support for F6YVB6 as seed ortholog is 100%.
Bootstrap support for Q5ZJ73 as seed ortholog is 66%.
Alternative seed ortholog is F1NDH3 (14 bits away from this cluster)

Group of orthologs #4219. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 G.gallus:143

H2XKA1              	100.00%		P62303              	100.00%
Bootstrap support for H2XKA1 as seed ortholog is 100%.
Bootstrap support for P62303 as seed ortholog is 100%.

Group of orthologs #4220. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 G.gallus:66

F6S3B3              	100.00%		P28362              	100.00%
                    	       		P50223              	100.00%
                    	       		P28361              	45.45%
Bootstrap support for F6S3B3 as seed ortholog is 99%.
Bootstrap support for P28362 as seed ortholog is 99%.
Bootstrap support for P50223 as seed ortholog is 100%.

Group of orthologs #4221. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 G.gallus:142

F7B8Y3              	100.00%		Q5ZIY7              	100.00%
                    	       		Q5ZHZ1              	21.05%
Bootstrap support for F7B8Y3 as seed ortholog is 100%.
Bootstrap support for Q5ZIY7 as seed ortholog is 100%.

Group of orthologs #4222. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 G.gallus:142

F6RRL3              	100.00%		E1BUZ5              	100.00%
Bootstrap support for F6RRL3 as seed ortholog is 100%.
Bootstrap support for E1BUZ5 as seed ortholog is 100%.

Group of orthologs #4223. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 G.gallus:142

F6UJ50              	100.00%		E1BU89              	100.00%
Bootstrap support for F6UJ50 as seed ortholog is 100%.
Bootstrap support for E1BU89 as seed ortholog is 100%.

Group of orthologs #4224. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 G.gallus:67

F6Q3Z9              	100.00%		E1C7Q6              	100.00%
Bootstrap support for F6Q3Z9 as seed ortholog is 95%.
Bootstrap support for E1C7Q6 as seed ortholog is 98%.

Group of orthologs #4225. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 G.gallus:142

H2XRR7              	100.00%		F1NV86              	100.00%
Bootstrap support for H2XRR7 as seed ortholog is 100%.
Bootstrap support for F1NV86 as seed ortholog is 100%.

Group of orthologs #4226. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 G.gallus:141

F6TND1              	100.00%		Q9W6I1              	100.00%
                    	       		F1P2M9              	85.61%
Bootstrap support for F6TND1 as seed ortholog is 100%.
Bootstrap support for Q9W6I1 as seed ortholog is 100%.

Group of orthologs #4227. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 G.gallus:141

F7B012              	100.00%		Q5F3Z3              	100.00%
                    	       		Q90879              	81.01%
Bootstrap support for F7B012 as seed ortholog is 99%.
Bootstrap support for Q5F3Z3 as seed ortholog is 100%.

Group of orthologs #4228. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 G.gallus:141

H2XLB1              	100.00%		P00378              	100.00%
H2XNW6              	27.06%		
Bootstrap support for H2XLB1 as seed ortholog is 100%.
Bootstrap support for P00378 as seed ortholog is 100%.

Group of orthologs #4229. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 G.gallus:141

F6YHQ3              	100.00%		E1BWX7              	100.00%
Bootstrap support for F6YHQ3 as seed ortholog is 100%.
Bootstrap support for E1BWX7 as seed ortholog is 100%.

Group of orthologs #4230. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 G.gallus:141

F6TCG6              	100.00%		F1NE08              	100.00%
Bootstrap support for F6TCG6 as seed ortholog is 100%.
Bootstrap support for F1NE08 as seed ortholog is 100%.

Group of orthologs #4231. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 G.gallus:141

F6UAC6              	100.00%		F1NE79              	100.00%
Bootstrap support for F6UAC6 as seed ortholog is 97%.
Bootstrap support for F1NE79 as seed ortholog is 100%.

Group of orthologs #4232. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 G.gallus:78

F6SNI9              	100.00%		F1NYA3              	100.00%
Bootstrap support for F6SNI9 as seed ortholog is 100%.
Bootstrap support for F1NYA3 as seed ortholog is 99%.

Group of orthologs #4233. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 G.gallus:95

H2XPD5              	100.00%		E1C3F9              	100.00%
Bootstrap support for H2XPD5 as seed ortholog is 100%.
Bootstrap support for E1C3F9 as seed ortholog is 99%.

Group of orthologs #4234. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 G.gallus:141

F7AN54              	100.00%		F1NT54              	100.00%
Bootstrap support for F7AN54 as seed ortholog is 100%.
Bootstrap support for F1NT54 as seed ortholog is 100%.

Group of orthologs #4235. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 G.gallus:141

F6YSJ8              	100.00%		F1P221              	100.00%
Bootstrap support for F6YSJ8 as seed ortholog is 100%.
Bootstrap support for F1P221 as seed ortholog is 100%.

Group of orthologs #4236. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 G.gallus:60

F6VZ12              	100.00%		P12957              	100.00%
Bootstrap support for F6VZ12 as seed ortholog is 100%.
Bootstrap support for P12957 as seed ortholog is 69%.
Alternative seed ortholog is Q5F3Y0 (60 bits away from this cluster)

Group of orthologs #4237. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 G.gallus:141

F6V9P3              	100.00%		Q5ZK34              	100.00%
Bootstrap support for F6V9P3 as seed ortholog is 100%.
Bootstrap support for Q5ZK34 as seed ortholog is 100%.

Group of orthologs #4238. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 G.gallus:141

H2XLP5              	100.00%		F1NZN0              	100.00%
Bootstrap support for H2XLP5 as seed ortholog is 100%.
Bootstrap support for F1NZN0 as seed ortholog is 100%.

Group of orthologs #4239. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 G.gallus:140

F6S014              	100.00%		F1N8V1              	100.00%
Bootstrap support for F6S014 as seed ortholog is 100%.
Bootstrap support for F1N8V1 as seed ortholog is 100%.

Group of orthologs #4240. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 G.gallus:140

F6YRT2              	100.00%		E1C126              	100.00%
Bootstrap support for F6YRT2 as seed ortholog is 100%.
Bootstrap support for E1C126 as seed ortholog is 100%.

Group of orthologs #4241. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 G.gallus:140

F6RXS5              	100.00%		F1NXU6              	100.00%
Bootstrap support for F6RXS5 as seed ortholog is 100%.
Bootstrap support for F1NXU6 as seed ortholog is 100%.

Group of orthologs #4242. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 G.gallus:140

F6X863              	100.00%		F1NPJ8              	100.00%
Bootstrap support for F6X863 as seed ortholog is 80%.
Bootstrap support for F1NPJ8 as seed ortholog is 100%.

Group of orthologs #4243. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 G.gallus:140

F6WJJ1              	100.00%		F1P0A2              	100.00%
Bootstrap support for F6WJJ1 as seed ortholog is 100%.
Bootstrap support for F1P0A2 as seed ortholog is 100%.

Group of orthologs #4244. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 G.gallus:21

H2XJV5              	100.00%		E1BY55              	100.00%
F6PX91              	16.88%		E1C926              	9.03%
H2XNH4              	6.17%		
Bootstrap support for H2XJV5 as seed ortholog is 92%.
Bootstrap support for E1BY55 as seed ortholog is 89%.

Group of orthologs #4245. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 G.gallus:139

F6QES8              	100.00%		E1C5L9              	100.00%
Bootstrap support for F6QES8 as seed ortholog is 100%.
Bootstrap support for E1C5L9 as seed ortholog is 100%.

Group of orthologs #4246. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 G.gallus:139

F6WS92              	100.00%		E1BVJ0              	100.00%
Bootstrap support for F6WS92 as seed ortholog is 100%.
Bootstrap support for E1BVJ0 as seed ortholog is 100%.

Group of orthologs #4247. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 G.gallus:139

F6TEV5              	100.00%		E1C9J4              	100.00%
Bootstrap support for F6TEV5 as seed ortholog is 100%.
Bootstrap support for E1C9J4 as seed ortholog is 100%.

Group of orthologs #4248. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 G.gallus:87

F6YLR6              	100.00%		E1BYA2              	100.00%
Bootstrap support for F6YLR6 as seed ortholog is 99%.
Bootstrap support for E1BYA2 as seed ortholog is 99%.

Group of orthologs #4249. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 G.gallus:139

F6SIS7              	100.00%		F1NLZ5              	100.00%
Bootstrap support for F6SIS7 as seed ortholog is 100%.
Bootstrap support for F1NLZ5 as seed ortholog is 100%.

Group of orthologs #4250. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 G.gallus:69

F7ACH1              	100.00%		E1C6F2              	100.00%
Bootstrap support for F7ACH1 as seed ortholog is 88%.
Bootstrap support for E1C6F2 as seed ortholog is 96%.

Group of orthologs #4251. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 G.gallus:1

H2XTZ3              	100.00%		E1BQU8              	100.00%
Bootstrap support for H2XTZ3 as seed ortholog is 100%.
Bootstrap support for E1BQU8 as seed ortholog is 52%.
Alternative seed ortholog is H9L2Y7 (1 bits away from this cluster)

Group of orthologs #4252. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 G.gallus:139

F6ZPP9              	100.00%		F1NLI9              	100.00%
Bootstrap support for F6ZPP9 as seed ortholog is 100%.
Bootstrap support for F1NLI9 as seed ortholog is 100%.

Group of orthologs #4253. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 G.gallus:58

F6Z3Z5              	100.00%		F1NT14              	100.00%
Bootstrap support for F6Z3Z5 as seed ortholog is 100%.
Bootstrap support for F1NT14 as seed ortholog is 99%.

Group of orthologs #4254. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 G.gallus:139

F6SKV4              	100.00%		Q5ZIE3              	100.00%
Bootstrap support for F6SKV4 as seed ortholog is 100%.
Bootstrap support for Q5ZIE3 as seed ortholog is 100%.

Group of orthologs #4255. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 G.gallus:139

H2XZL7              	100.00%		F1NE32              	100.00%
Bootstrap support for H2XZL7 as seed ortholog is 100%.
Bootstrap support for F1NE32 as seed ortholog is 100%.

Group of orthologs #4256. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 G.gallus:139

H2XQ66              	100.00%		Q5ZLC9              	100.00%
Bootstrap support for H2XQ66 as seed ortholog is 100%.
Bootstrap support for Q5ZLC9 as seed ortholog is 100%.

Group of orthologs #4257. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 G.gallus:77

F7BL24              	100.00%		Q90674              	100.00%
F7BKP7              	45.45%		
H2XKG9              	23.86%		
F6XSI6              	17.90%		
F7ABQ9              	17.33%		
H2Y257              	16.57%		
H2XKW4              	16.00%		
H2XR57              	15.44%		
H2XND0              	15.34%		
H2Y0P5              	14.77%		
F7AT69              	14.77%		
F6YU08              	13.35%		
F6PUY5              	12.50%		
F7B2P5              	12.41%		
F7A9I0              	8.71%		
H2XXE8              	6.53%		
F6XKD5              	6.16%		
Bootstrap support for F7BL24 as seed ortholog is 99%.
Bootstrap support for Q90674 as seed ortholog is 96%.

Group of orthologs #4258. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 G.gallus:51

F6X383              	100.00%		E1BWK0              	100.00%
                    	       		F1NJC1              	29.27%
Bootstrap support for F6X383 as seed ortholog is 89%.
Bootstrap support for E1BWK0 as seed ortholog is 92%.

Group of orthologs #4259. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 G.gallus:55

H2XPQ8              	100.00%		E1C1R8              	100.00%
                    	       		F1N9H6              	38.59%
Bootstrap support for H2XPQ8 as seed ortholog is 99%.
Bootstrap support for E1C1R8 as seed ortholog is 96%.

Group of orthologs #4260. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 G.gallus:138

F6TBM3              	100.00%		F1P4Y0              	100.00%
                    	       		E1C577              	7.14%
Bootstrap support for F6TBM3 as seed ortholog is 100%.
Bootstrap support for F1P4Y0 as seed ortholog is 100%.

Group of orthologs #4261. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 G.gallus:138

F6QH68              	100.00%		F1NL54              	100.00%
Bootstrap support for F6QH68 as seed ortholog is 100%.
Bootstrap support for F1NL54 as seed ortholog is 100%.

Group of orthologs #4262. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 G.gallus:138

F6ZF76              	100.00%		F1P0W7              	100.00%
Bootstrap support for F6ZF76 as seed ortholog is 100%.
Bootstrap support for F1P0W7 as seed ortholog is 100%.

Group of orthologs #4263. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 G.gallus:138

H2Y2I0              	100.00%		E1C343              	100.00%
Bootstrap support for H2Y2I0 as seed ortholog is 100%.
Bootstrap support for E1C343 as seed ortholog is 100%.

Group of orthologs #4264. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 G.gallus:138

H2Y1V2              	100.00%		F1NNM0              	100.00%
Bootstrap support for H2Y1V2 as seed ortholog is 100%.
Bootstrap support for F1NNM0 as seed ortholog is 100%.

Group of orthologs #4265. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 G.gallus:138

H2Y1C3              	100.00%		F1NRZ8              	100.00%
Bootstrap support for H2Y1C3 as seed ortholog is 100%.
Bootstrap support for F1NRZ8 as seed ortholog is 100%.

Group of orthologs #4266. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 G.gallus:138

H2XY20              	100.00%		P11183              	100.00%
Bootstrap support for H2XY20 as seed ortholog is 100%.
Bootstrap support for P11183 as seed ortholog is 100%.

Group of orthologs #4267. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 G.gallus:138

H2Y0C8              	100.00%		Q5ZL19              	100.00%
Bootstrap support for H2Y0C8 as seed ortholog is 100%.
Bootstrap support for Q5ZL19 as seed ortholog is 100%.

Group of orthologs #4268. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 G.gallus:137

F6UGG0              	100.00%		Q5F3Y4              	100.00%
                    	       		F1P1E4              	24.79%
                    	       		E1BR35              	20.20%
Bootstrap support for F6UGG0 as seed ortholog is 100%.
Bootstrap support for Q5F3Y4 as seed ortholog is 100%.

Group of orthologs #4269. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 G.gallus:137

F6RJQ4              	100.00%		E1BUW4              	100.00%
                    	       		E1C9D0              	18.32%
Bootstrap support for F6RJQ4 as seed ortholog is 100%.
Bootstrap support for E1BUW4 as seed ortholog is 100%.

Group of orthologs #4270. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 G.gallus:46

F7A491              	100.00%		E1BYL1              	100.00%
                    	       		E1C487              	100.00%
Bootstrap support for F7A491 as seed ortholog is 100%.
Bootstrap support for E1BYL1 as seed ortholog is 94%.
Bootstrap support for E1C487 as seed ortholog is 94%.

Group of orthologs #4271. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 G.gallus:137

F6TXW3              	100.00%		P62985              	100.00%
Bootstrap support for F6TXW3 as seed ortholog is 100%.
Bootstrap support for P62985 as seed ortholog is 100%.

Group of orthologs #4272. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 G.gallus:137

F7A819              	100.00%		F1NWG1              	100.00%
Bootstrap support for F7A819 as seed ortholog is 100%.
Bootstrap support for F1NWG1 as seed ortholog is 100%.

Group of orthologs #4273. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 G.gallus:137

F6V725              	100.00%		Q5ZIK2              	100.00%
Bootstrap support for F6V725 as seed ortholog is 100%.
Bootstrap support for Q5ZIK2 as seed ortholog is 100%.

Group of orthologs #4274. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 G.gallus:137

H2Y1D7              	100.00%		H9L0J9              	100.00%
Bootstrap support for H2Y1D7 as seed ortholog is 100%.
Bootstrap support for H9L0J9 as seed ortholog is 100%.

Group of orthologs #4275. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 G.gallus:85

H2XMJ0              	100.00%		F1P1K4              	100.00%
                    	       		F1P1X1              	19.87%
                    	       		O13155              	10.92%
Bootstrap support for H2XMJ0 as seed ortholog is 100%.
Bootstrap support for F1P1K4 as seed ortholog is 99%.

Group of orthologs #4276. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 G.gallus:136

F6W8L4              	100.00%		P13216              	100.00%
                    	       		F1NII3              	37.75%
Bootstrap support for F6W8L4 as seed ortholog is 95%.
Bootstrap support for P13216 as seed ortholog is 100%.

Group of orthologs #4277. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 G.gallus:136

F6XF81              	100.00%		E1C3I1              	100.00%
Bootstrap support for F6XF81 as seed ortholog is 100%.
Bootstrap support for E1C3I1 as seed ortholog is 100%.

Group of orthologs #4278. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 G.gallus:136

F6T6Y7              	100.00%		F1NT45              	100.00%
Bootstrap support for F6T6Y7 as seed ortholog is 100%.
Bootstrap support for F1NT45 as seed ortholog is 100%.

Group of orthologs #4279. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 G.gallus:56

F6SN53              	100.00%		F1NVP6              	100.00%
Bootstrap support for F6SN53 as seed ortholog is 100%.
Bootstrap support for F1NVP6 as seed ortholog is 96%.

Group of orthologs #4280. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 G.gallus:136

F6YRL7              	100.00%		Q5F4A9              	100.00%
Bootstrap support for F6YRL7 as seed ortholog is 100%.
Bootstrap support for Q5F4A9 as seed ortholog is 100%.

Group of orthologs #4281. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 G.gallus:136

H2XNY2              	100.00%		Q5ZJQ3              	100.00%
Bootstrap support for H2XNY2 as seed ortholog is 100%.
Bootstrap support for Q5ZJQ3 as seed ortholog is 100%.

Group of orthologs #4282. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 G.gallus:135

F7ARW8              	100.00%		E1BUR4              	100.00%
                    	       		F1NR51              	31.96%
                    	       		F1NJ20              	28.35%
                    	       		F1P5T6              	26.03%
Bootstrap support for F7ARW8 as seed ortholog is 100%.
Bootstrap support for E1BUR4 as seed ortholog is 100%.

Group of orthologs #4283. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 G.gallus:135

F6PKE5              	100.00%		E1C761              	100.00%
                    	       		F1NBH1              	52.43%
                    	       		E1C2J0              	51.91%
Bootstrap support for F6PKE5 as seed ortholog is 100%.
Bootstrap support for E1C761 as seed ortholog is 100%.

Group of orthologs #4284. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 G.gallus:135

H2XL39              	100.00%		Q5EES2              	100.00%
                    	       		Q5EES3              	44.74%
                    	       		P23289              	28.95%
Bootstrap support for H2XL39 as seed ortholog is 94%.
Bootstrap support for Q5EES2 as seed ortholog is 100%.

Group of orthologs #4285. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 G.gallus:135

F6U930              	100.00%		E1BVI4              	100.00%
                    	       		F1NGS2              	10.59%
Bootstrap support for F6U930 as seed ortholog is 100%.
Bootstrap support for E1BVI4 as seed ortholog is 100%.

Group of orthologs #4286. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 G.gallus:135

O18313              	100.00%		P14840              	100.00%
                    	       		P17278              	38.58%
Bootstrap support for O18313 as seed ortholog is 87%.
Bootstrap support for P14840 as seed ortholog is 100%.

Group of orthologs #4287. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 G.gallus:40

F6XQP8              	100.00%		F1NBE2              	100.00%
Bootstrap support for F6XQP8 as seed ortholog is 100%.
Bootstrap support for F1NBE2 as seed ortholog is 99%.

Group of orthologs #4288. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:135

H2XK11              	100.00%		E1C1L5              	100.00%
Bootstrap support for H2XK11 as seed ortholog is 99%.
Bootstrap support for E1C1L5 as seed ortholog is 100%.

Group of orthologs #4289. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 G.gallus:135

H2XSR9              	100.00%		E1BWW9              	100.00%
Bootstrap support for H2XSR9 as seed ortholog is 99%.
Bootstrap support for E1BWW9 as seed ortholog is 100%.

Group of orthologs #4290. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 G.gallus:135

H2XTN0              	100.00%		E1C7Z0              	100.00%
Bootstrap support for H2XTN0 as seed ortholog is 100%.
Bootstrap support for E1C7Z0 as seed ortholog is 100%.

Group of orthologs #4291. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 G.gallus:135

F6U3U7              	100.00%		Q5ZHU0              	100.00%
Bootstrap support for F6U3U7 as seed ortholog is 100%.
Bootstrap support for Q5ZHU0 as seed ortholog is 100%.

Group of orthologs #4292. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 G.gallus:135

H2XPC5              	100.00%		H9KZA7              	100.00%
Bootstrap support for H2XPC5 as seed ortholog is 100%.
Bootstrap support for H9KZA7 as seed ortholog is 100%.

Group of orthologs #4293. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 G.gallus:134

Q1RL92              	100.00%		F1NNH5              	100.00%
                    	       		E1BWB0              	34.59%
                    	       		F1NMF8              	23.67%
Bootstrap support for Q1RL92 as seed ortholog is 100%.
Bootstrap support for F1NNH5 as seed ortholog is 100%.

Group of orthologs #4294. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 G.gallus:134

F6QIH1              	100.00%		E1BT37              	100.00%
Bootstrap support for F6QIH1 as seed ortholog is 100%.
Bootstrap support for E1BT37 as seed ortholog is 100%.

Group of orthologs #4295. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 G.gallus:134

F6REV8              	100.00%		E1BSI6              	100.00%
Bootstrap support for F6REV8 as seed ortholog is 100%.
Bootstrap support for E1BSI6 as seed ortholog is 100%.

Group of orthologs #4296. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 G.gallus:134

H2XMB4              	100.00%		E1BSM6              	100.00%
Bootstrap support for H2XMB4 as seed ortholog is 100%.
Bootstrap support for E1BSM6 as seed ortholog is 100%.

Group of orthologs #4297. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 G.gallus:134

F6Z0W4              	100.00%		F1NW95              	100.00%
Bootstrap support for F6Z0W4 as seed ortholog is 100%.
Bootstrap support for F1NW95 as seed ortholog is 100%.

Group of orthologs #4298. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 G.gallus:134

H2XWY8              	100.00%		F1N9B2              	100.00%
Bootstrap support for H2XWY8 as seed ortholog is 100%.
Bootstrap support for F1N9B2 as seed ortholog is 100%.

Group of orthologs #4299. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 G.gallus:134

H2XUI3              	100.00%		F1P3Y1              	100.00%
Bootstrap support for H2XUI3 as seed ortholog is 100%.
Bootstrap support for F1P3Y1 as seed ortholog is 100%.

Group of orthologs #4300. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 G.gallus:134

Q4H376              	100.00%		P52162              	100.00%
Bootstrap support for Q4H376 as seed ortholog is 100%.
Bootstrap support for P52162 as seed ortholog is 100%.

Group of orthologs #4301. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 G.gallus:133

F6WVZ0              	100.00%		Q90596              	100.00%
                    	       		Q90889              	53.09%
                    	       		Q90595              	38.89%
Bootstrap support for F6WVZ0 as seed ortholog is 100%.
Bootstrap support for Q90596 as seed ortholog is 100%.

Group of orthologs #4302. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 G.gallus:133

F6S809              	100.00%		E1C5L8              	100.00%
Bootstrap support for F6S809 as seed ortholog is 100%.
Bootstrap support for E1C5L8 as seed ortholog is 100%.

Group of orthologs #4303. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 G.gallus:133

F6U8D6              	100.00%		E1C7X1              	100.00%
Bootstrap support for F6U8D6 as seed ortholog is 100%.
Bootstrap support for E1C7X1 as seed ortholog is 100%.

Group of orthologs #4304. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 G.gallus:133

F6URQ1              	100.00%		E1C7U8              	100.00%
Bootstrap support for F6URQ1 as seed ortholog is 100%.
Bootstrap support for E1C7U8 as seed ortholog is 100%.

Group of orthologs #4305. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 G.gallus:133

F6SVW0              	100.00%		Q5F334              	100.00%
Bootstrap support for F6SVW0 as seed ortholog is 100%.
Bootstrap support for Q5F334 as seed ortholog is 100%.

Group of orthologs #4306. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 G.gallus:133

F6UE50              	100.00%		Q5F489              	100.00%
Bootstrap support for F6UE50 as seed ortholog is 100%.
Bootstrap support for Q5F489 as seed ortholog is 100%.

Group of orthologs #4307. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 G.gallus:133

F6ZFT6              	100.00%		Q5ZJB7              	100.00%
Bootstrap support for F6ZFT6 as seed ortholog is 100%.
Bootstrap support for Q5ZJB7 as seed ortholog is 100%.

Group of orthologs #4308. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 G.gallus:51

F6Y3G3              	100.00%		F1NNI3              	100.00%
                    	       		E1BWC4              	47.85%
                    	       		E1C2J2              	38.61%
Bootstrap support for F6Y3G3 as seed ortholog is 99%.
Bootstrap support for F1NNI3 as seed ortholog is 97%.

Group of orthologs #4309. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 G.gallus:132

H2XRV7              	100.00%		E1C2C4              	100.00%
                    	       		H9L0N5              	36.30%
Bootstrap support for H2XRV7 as seed ortholog is 100%.
Bootstrap support for E1C2C4 as seed ortholog is 100%.

Group of orthologs #4310. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 G.gallus:132

F6RGQ1              	100.00%		E1C3B6              	100.00%
Bootstrap support for F6RGQ1 as seed ortholog is 100%.
Bootstrap support for E1C3B6 as seed ortholog is 100%.

Group of orthologs #4311. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 G.gallus:132

F6WFW0              	100.00%		E1C4D0              	100.00%
Bootstrap support for F6WFW0 as seed ortholog is 100%.
Bootstrap support for E1C4D0 as seed ortholog is 100%.

Group of orthologs #4312. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 G.gallus:132

F6VEQ7              	100.00%		E1C9H0              	100.00%
Bootstrap support for F6VEQ7 as seed ortholog is 100%.
Bootstrap support for E1C9H0 as seed ortholog is 100%.

Group of orthologs #4313. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 G.gallus:132

H2XKJ0              	100.00%		E1C4M8              	100.00%
Bootstrap support for H2XKJ0 as seed ortholog is 100%.
Bootstrap support for E1C4M8 as seed ortholog is 100%.

Group of orthologs #4314. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 G.gallus:132

H2XWT1              	100.00%		F1NEV2              	100.00%
Bootstrap support for H2XWT1 as seed ortholog is 100%.
Bootstrap support for F1NEV2 as seed ortholog is 100%.

Group of orthologs #4315. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 G.gallus:132

H2XX34              	100.00%		F1P155              	100.00%
Bootstrap support for H2XX34 as seed ortholog is 100%.
Bootstrap support for F1P155 as seed ortholog is 100%.

Group of orthologs #4316. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 G.gallus:28

F6PQC6              	100.00%		F1NAJ0              	100.00%
F6PSB3              	100.00%		F1P2N5              	100.00%
F6WVA9              	10.86%		E1BS22              	23.28%
                    	       		E1C5Q7              	15.10%
                    	       		E1C8Q0              	14.77%
                    	       		E1BWW8              	6.57%
                    	       		E1BUC3              	6.04%
Bootstrap support for F6PQC6 as seed ortholog is 33%.
Alternative seed ortholog is F6YW52 (13 bits away from this cluster)
Bootstrap support for F6PSB3 as seed ortholog is 65%.
Alternative seed ortholog is F6YW52 (13 bits away from this cluster)
Bootstrap support for F1NAJ0 as seed ortholog is 88%.
Bootstrap support for F1P2N5 as seed ortholog is 63%.
Alternative seed ortholog is F1NSR2 (28 bits away from this cluster)

Group of orthologs #4317. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 G.gallus:70

F6YJR3              	100.00%		F1P2M4              	100.00%
                    	       		E1C7F6              	20.09%
                    	       		Q90Z54              	20.09%
                    	       		Q9DEB6              	19.87%
                    	       		P46692              	16.52%
Bootstrap support for F6YJR3 as seed ortholog is 100%.
Bootstrap support for F1P2M4 as seed ortholog is 99%.

Group of orthologs #4318. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 G.gallus:131

F6PJ75              	100.00%		E1C3B3              	100.00%
                    	       		E1C029              	46.37%
Bootstrap support for F6PJ75 as seed ortholog is 100%.
Bootstrap support for E1C3B3 as seed ortholog is 100%.

Group of orthologs #4319. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 G.gallus:131

F6SLJ7              	100.00%		F1NIH5              	100.00%
Bootstrap support for F6SLJ7 as seed ortholog is 100%.
Bootstrap support for F1NIH5 as seed ortholog is 100%.

Group of orthologs #4320. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 G.gallus:131

F6TX28              	100.00%		F1P389              	100.00%
Bootstrap support for F6TX28 as seed ortholog is 100%.
Bootstrap support for F1P389 as seed ortholog is 100%.

Group of orthologs #4321. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 G.gallus:131

H2XQD0              	100.00%		F1NBI3              	100.00%
Bootstrap support for H2XQD0 as seed ortholog is 100%.
Bootstrap support for F1NBI3 as seed ortholog is 100%.

Group of orthologs #4322. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 G.gallus:131

F6U981              	100.00%		Q5ZKI3              	100.00%
Bootstrap support for F6U981 as seed ortholog is 100%.
Bootstrap support for Q5ZKI3 as seed ortholog is 100%.

Group of orthologs #4323. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 G.gallus:131

H2Y1W5              	100.00%		E1C3W8              	100.00%
Bootstrap support for H2Y1W5 as seed ortholog is 100%.
Bootstrap support for E1C3W8 as seed ortholog is 100%.

Group of orthologs #4324. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 G.gallus:131

F6WIJ0              	100.00%		Q6K1L7              	100.00%
Bootstrap support for F6WIJ0 as seed ortholog is 100%.
Bootstrap support for Q6K1L7 as seed ortholog is 100%.

Group of orthologs #4325. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 G.gallus:84

H2XL53              	100.00%		F1NZC1              	100.00%
Bootstrap support for H2XL53 as seed ortholog is 100%.
Bootstrap support for F1NZC1 as seed ortholog is 100%.

Group of orthologs #4326. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 G.gallus:131

F6Z589              	100.00%		Q5ZI69              	100.00%
Bootstrap support for F6Z589 as seed ortholog is 100%.
Bootstrap support for Q5ZI69 as seed ortholog is 100%.

Group of orthologs #4327. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 G.gallus:39

F7AXY8              	100.00%		P28238              	100.00%
                    	       		F1NJZ6              	26.92%
                    	       		H9KZ39              	25.64%
                    	       		Q2MCJ7              	23.85%
Bootstrap support for F7AXY8 as seed ortholog is 97%.
Bootstrap support for P28238 as seed ortholog is 68%.
Alternative seed ortholog is F1NK92 (39 bits away from this cluster)

Group of orthologs #4328. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 G.gallus:41

Q4H3M8              	100.00%		E1BRX3              	100.00%
                    	       		E1BT91              	52.68%
Bootstrap support for Q4H3M8 as seed ortholog is 100%.
Bootstrap support for E1BRX3 as seed ortholog is 99%.

Group of orthologs #4329. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 G.gallus:130

H2XX77              	100.00%		E1C8P8              	100.00%
                    	       		F1NMV8              	34.95%
Bootstrap support for H2XX77 as seed ortholog is 100%.
Bootstrap support for E1C8P8 as seed ortholog is 100%.

Group of orthologs #4330. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 G.gallus:20

F7BIS6              	100.00%		F1P3P9              	100.00%
                    	       		E1C2T5              	6.10%
Bootstrap support for F7BIS6 as seed ortholog is 80%.
Bootstrap support for F1P3P9 as seed ortholog is 61%.
Alternative seed ortholog is F1P2M6 (20 bits away from this cluster)

Group of orthologs #4331. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 G.gallus:130

H2XP61              	100.00%		F1NWY4              	100.00%
Bootstrap support for H2XP61 as seed ortholog is 100%.
Bootstrap support for F1NWY4 as seed ortholog is 100%.

Group of orthologs #4332. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 G.gallus:130

F7AQV0              	100.00%		Q76LT9              	100.00%
Bootstrap support for F7AQV0 as seed ortholog is 100%.
Bootstrap support for Q76LT9 as seed ortholog is 100%.

Group of orthologs #4333. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 G.gallus:130

H2XUV5              	100.00%		H9L2E5              	100.00%
Bootstrap support for H2XUV5 as seed ortholog is 100%.
Bootstrap support for H9L2E5 as seed ortholog is 100%.

Group of orthologs #4334. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:78

H2Y0G7              	100.00%		E1BXL6              	100.00%
                    	       		E1BXH5              	38.34%
Bootstrap support for H2Y0G7 as seed ortholog is 100%.
Bootstrap support for E1BXL6 as seed ortholog is 99%.

Group of orthologs #4335. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:129

H2XZ55              	100.00%		Q5F3Y2              	100.00%
                    	       		E1C534              	10.60%
Bootstrap support for H2XZ55 as seed ortholog is 100%.
Bootstrap support for Q5F3Y2 as seed ortholog is 100%.

Group of orthologs #4336. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:129

F6VDD5              	100.00%		E1BSF0              	100.00%
Bootstrap support for F6VDD5 as seed ortholog is 100%.
Bootstrap support for E1BSF0 as seed ortholog is 100%.

Group of orthologs #4337. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:129

F7AGK5              	100.00%		E1C297              	100.00%
Bootstrap support for F7AGK5 as seed ortholog is 100%.
Bootstrap support for E1C297 as seed ortholog is 100%.

Group of orthologs #4338. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:129

F7BK53              	100.00%		E1C6R6              	100.00%
Bootstrap support for F7BK53 as seed ortholog is 100%.
Bootstrap support for E1C6R6 as seed ortholog is 100%.

Group of orthologs #4339. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:129

F6WNV4              	100.00%		F1P5S9              	100.00%
Bootstrap support for F6WNV4 as seed ortholog is 100%.
Bootstrap support for F1P5S9 as seed ortholog is 100%.

Group of orthologs #4340. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:129

F6Z0S6              	100.00%		F1P4Y1              	100.00%
Bootstrap support for F6Z0S6 as seed ortholog is 100%.
Bootstrap support for F1P4Y1 as seed ortholog is 100%.

Group of orthologs #4341. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:57

Q4H2X3              	100.00%		E1C639              	100.00%
Bootstrap support for Q4H2X3 as seed ortholog is 100%.
Bootstrap support for E1C639 as seed ortholog is 99%.

Group of orthologs #4342. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:129

H2XVT6              	100.00%		F1NP43              	100.00%
Bootstrap support for H2XVT6 as seed ortholog is 100%.
Bootstrap support for F1NP43 as seed ortholog is 100%.

Group of orthologs #4343. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 G.gallus:129

H2Y058              	100.00%		Q5ZHS3              	100.00%
Bootstrap support for H2Y058 as seed ortholog is 100%.
Bootstrap support for Q5ZHS3 as seed ortholog is 100%.

Group of orthologs #4344. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 G.gallus:128

F6YMW5              	100.00%		E1C8P1              	100.00%
                    	       		Q5F3V5              	41.08%
Bootstrap support for F6YMW5 as seed ortholog is 100%.
Bootstrap support for E1C8P1 as seed ortholog is 100%.

Group of orthologs #4345. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 G.gallus:67

H2XVK4              	100.00%		F1NZ21              	100.00%
                    	       		E1BZS4              	11.98%
Bootstrap support for H2XVK4 as seed ortholog is 99%.
Bootstrap support for F1NZ21 as seed ortholog is 97%.

Group of orthologs #4346. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 G.gallus:128

Q4H3L8              	100.00%		O73612              	100.00%
                    	       		F1NLX6              	45.01%
Bootstrap support for Q4H3L8 as seed ortholog is 100%.
Bootstrap support for O73612 as seed ortholog is 100%.

Group of orthologs #4347. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 G.gallus:128

F6TBF1              	100.00%		E1BVH6              	100.00%
Bootstrap support for F6TBF1 as seed ortholog is 100%.
Bootstrap support for E1BVH6 as seed ortholog is 100%.

Group of orthologs #4348. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 G.gallus:128

F6QHL8              	100.00%		F1NQ66              	100.00%
Bootstrap support for F6QHL8 as seed ortholog is 100%.
Bootstrap support for F1NQ66 as seed ortholog is 100%.

Group of orthologs #4349. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 G.gallus:128

F6YVQ1              	100.00%		E1C962              	100.00%
Bootstrap support for F6YVQ1 as seed ortholog is 100%.
Bootstrap support for E1C962 as seed ortholog is 100%.

Group of orthologs #4350. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:54

F6ZGG6              	100.00%		F1NJ85              	100.00%
Bootstrap support for F6ZGG6 as seed ortholog is 99%.
Bootstrap support for F1NJ85 as seed ortholog is 98%.

Group of orthologs #4351. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 G.gallus:128

F7ARW3              	100.00%		F1NPK3              	100.00%
Bootstrap support for F7ARW3 as seed ortholog is 100%.
Bootstrap support for F1NPK3 as seed ortholog is 100%.

Group of orthologs #4352. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 G.gallus:78

F6UB61              	100.00%		P42292              	100.00%
Bootstrap support for F6UB61 as seed ortholog is 91%.
Bootstrap support for P42292 as seed ortholog is 93%.

Group of orthologs #4353. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 G.gallus:57

F6YBB2              	100.00%		Q91974              	100.00%
Bootstrap support for F6YBB2 as seed ortholog is 97%.
Bootstrap support for Q91974 as seed ortholog is 96%.

Group of orthologs #4354. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 G.gallus:19

H2Y0F5              	100.00%		F1NLH1              	100.00%
Bootstrap support for H2Y0F5 as seed ortholog is 100%.
Bootstrap support for F1NLH1 as seed ortholog is 77%.

Group of orthologs #4355. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 G.gallus:48

H2XTC3              	100.00%		H9L1F8              	100.00%
Bootstrap support for H2XTC3 as seed ortholog is 100%.
Bootstrap support for H9L1F8 as seed ortholog is 99%.

Group of orthologs #4356. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 G.gallus:127

H2XKX7              	100.00%		Q5ZM30              	100.00%
                    	       		Q5F4B4              	52.12%
Bootstrap support for H2XKX7 as seed ortholog is 100%.
Bootstrap support for Q5ZM30 as seed ortholog is 100%.

Group of orthologs #4357. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 G.gallus:127

F6PYN6              	100.00%		F1N9Y7              	100.00%
Bootstrap support for F6PYN6 as seed ortholog is 100%.
Bootstrap support for F1N9Y7 as seed ortholog is 100%.

Group of orthologs #4358. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 G.gallus:48

F6SQ79              	100.00%		F1NLX9              	100.00%
Bootstrap support for F6SQ79 as seed ortholog is 100%.
Bootstrap support for F1NLX9 as seed ortholog is 94%.

Group of orthologs #4359. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 G.gallus:17

F7BE19              	100.00%		F1NB61              	100.00%
Bootstrap support for F7BE19 as seed ortholog is 100%.
Bootstrap support for F1NB61 as seed ortholog is 65%.
Alternative seed ortholog is F1NCI8 (17 bits away from this cluster)

Group of orthologs #4360. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 G.gallus:127

F7AIB9              	100.00%		F1NJF0              	100.00%
Bootstrap support for F7AIB9 as seed ortholog is 100%.
Bootstrap support for F1NJF0 as seed ortholog is 100%.

Group of orthologs #4361. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 G.gallus:127

H2XZW2              	100.00%		E1BXY8              	100.00%
Bootstrap support for H2XZW2 as seed ortholog is 100%.
Bootstrap support for E1BXY8 as seed ortholog is 100%.

Group of orthologs #4362. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 G.gallus:127

F6ZBV1              	100.00%		Q5F4B6              	100.00%
Bootstrap support for F6ZBV1 as seed ortholog is 100%.
Bootstrap support for Q5F4B6 as seed ortholog is 100%.

Group of orthologs #4363. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 G.gallus:127

H2XSE6              	100.00%		F1NXG9              	100.00%
Bootstrap support for H2XSE6 as seed ortholog is 100%.
Bootstrap support for F1NXG9 as seed ortholog is 100%.

Group of orthologs #4364. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 G.gallus:126

H2XL09              	100.00%		F1NYX9              	100.00%
                    	       		Q5ZKH8              	99.74%
Bootstrap support for H2XL09 as seed ortholog is 100%.
Bootstrap support for F1NYX9 as seed ortholog is 100%.

Group of orthologs #4365. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 G.gallus:126

H2XYU8              	100.00%		Q9DG45              	100.00%
                    	       		O73930              	19.54%
Bootstrap support for H2XYU8 as seed ortholog is 100%.
Bootstrap support for Q9DG45 as seed ortholog is 100%.

Group of orthologs #4366. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 G.gallus:126

F6SII4              	100.00%		F1NIS7              	100.00%
Bootstrap support for F6SII4 as seed ortholog is 100%.
Bootstrap support for F1NIS7 as seed ortholog is 100%.

Group of orthologs #4367. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 G.gallus:126

F6YF30              	100.00%		E1C810              	100.00%
Bootstrap support for F6YF30 as seed ortholog is 100%.
Bootstrap support for E1C810 as seed ortholog is 100%.

Group of orthologs #4368. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 G.gallus:126

H2XTF1              	100.00%		E1BZ79              	100.00%
Bootstrap support for H2XTF1 as seed ortholog is 100%.
Bootstrap support for E1BZ79 as seed ortholog is 100%.

Group of orthologs #4369. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 G.gallus:126

H2XJW9              	100.00%		F1N8E6              	100.00%
Bootstrap support for H2XJW9 as seed ortholog is 100%.
Bootstrap support for F1N8E6 as seed ortholog is 100%.

Group of orthologs #4370. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 G.gallus:126

Q8I7D9              	100.00%		E1BUS9              	100.00%
Bootstrap support for Q8I7D9 as seed ortholog is 100%.
Bootstrap support for E1BUS9 as seed ortholog is 100%.

Group of orthologs #4371. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 G.gallus:126

H2XT87              	100.00%		F1NIM7              	100.00%
Bootstrap support for H2XT87 as seed ortholog is 100%.
Bootstrap support for F1NIM7 as seed ortholog is 100%.

Group of orthologs #4372. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 G.gallus:126

F7B6D7              	100.00%		Q5ZM89              	100.00%
Bootstrap support for F7B6D7 as seed ortholog is 100%.
Bootstrap support for Q5ZM89 as seed ortholog is 100%.

Group of orthologs #4373. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 G.gallus:126

Q8HIN8              	100.00%		P14092              	100.00%
Bootstrap support for Q8HIN8 as seed ortholog is 100%.
Bootstrap support for P14092 as seed ortholog is 100%.

Group of orthologs #4374. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 G.gallus:126

H2Y2U8              	100.00%		Q76I89              	100.00%
Bootstrap support for H2Y2U8 as seed ortholog is 100%.
Bootstrap support for Q76I89 as seed ortholog is 100%.

Group of orthologs #4375. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 G.gallus:22

F7B9X1              	100.00%		Q8JIS3              	100.00%
F6U973              	12.96%		F1NKC4              	94.30%
F6S294              	10.58%		
H2XS77              	10.32%		
F7BEK9              	9.26%		
F6VXK0              	8.99%		
F6TXI5              	8.73%		
H2XZS1              	8.47%		
F7AWY7              	7.67%		
F6S2B0              	7.41%		
F7BDP7              	7.14%		
L7N0R4              	6.88%		
F6XKL3              	5.56%		
F6XKJ1              	5.56%		
Bootstrap support for F7B9X1 as seed ortholog is 90%.
Bootstrap support for Q8JIS3 as seed ortholog is 81%.

Group of orthologs #4376. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:29 G.gallus:11

F6ZB81              	100.00%		H9L025              	100.00%
F6SHX3              	20.95%		F1NSN5              	25.56%
                    	       		F1NUG1              	10.38%
Bootstrap support for F6ZB81 as seed ortholog is 78%.
Bootstrap support for H9L025 as seed ortholog is 56%.
Alternative seed ortholog is F1P2L2 (11 bits away from this cluster)

Group of orthologs #4377. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 G.gallus:125

F6Y5T9              	100.00%		F1NW40              	100.00%
                    	       		F1NRP3              	36.06%
Bootstrap support for F6Y5T9 as seed ortholog is 100%.
Bootstrap support for F1NW40 as seed ortholog is 100%.

Group of orthologs #4378. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 G.gallus:125

F6T052              	100.00%		E1BUA8              	100.00%
Bootstrap support for F6T052 as seed ortholog is 100%.
Bootstrap support for E1BUA8 as seed ortholog is 100%.

Group of orthologs #4379. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 G.gallus:41

F6SJU9              	100.00%		E1BXL4              	100.00%
Bootstrap support for F6SJU9 as seed ortholog is 85%.
Bootstrap support for E1BXL4 as seed ortholog is 94%.

Group of orthologs #4380. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 G.gallus:125

F6ZXR3              	100.00%		E1BXS4              	100.00%
Bootstrap support for F6ZXR3 as seed ortholog is 69%.
Alternative seed ortholog is F6RBS2 (14 bits away from this cluster)
Bootstrap support for E1BXS4 as seed ortholog is 100%.

Group of orthologs #4381. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 G.gallus:125

F6S840              	100.00%		F1NRH0              	100.00%
Bootstrap support for F6S840 as seed ortholog is 100%.
Bootstrap support for F1NRH0 as seed ortholog is 100%.

Group of orthologs #4382. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 G.gallus:125

F6VL68              	100.00%		Q5ZMM9              	100.00%
Bootstrap support for F6VL68 as seed ortholog is 100%.
Bootstrap support for Q5ZMM9 as seed ortholog is 100%.

Group of orthologs #4383. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 G.gallus:17

F6YTT5              	100.00%		P02259              	100.00%
Bootstrap support for F6YTT5 as seed ortholog is 92%.
Bootstrap support for P02259 as seed ortholog is 99%.

Group of orthologs #4384. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 G.gallus:125

H2XTN5              	100.00%		P16039              	100.00%
Bootstrap support for H2XTN5 as seed ortholog is 100%.
Bootstrap support for P16039 as seed ortholog is 100%.

Group of orthologs #4385. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:124

F6V542              	100.00%		E1BWP0              	100.00%
                    	       		Q5ZJV6              	100.00%
                    	       		E1BUP1              	43.97%
Bootstrap support for F6V542 as seed ortholog is 100%.
Bootstrap support for E1BWP0 as seed ortholog is 100%.
Bootstrap support for Q5ZJV6 as seed ortholog is 100%.

Group of orthologs #4386. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 G.gallus:15

F7BAS4              	100.00%		E1BXU5              	100.00%
F6VQS8              	39.35%		F1NVM1              	9.93%
Bootstrap support for F7BAS4 as seed ortholog is 96%.
Bootstrap support for E1BXU5 as seed ortholog is 64%.
Alternative seed ortholog is E1C1N6 (15 bits away from this cluster)

Group of orthologs #4387. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:124

H2Y0X6              	100.00%		F1NHA6              	100.00%
                    	       		E1BT99              	21.91%
                    	       		E1BQL3              	12.90%
Bootstrap support for H2Y0X6 as seed ortholog is 100%.
Bootstrap support for F1NHA6 as seed ortholog is 100%.

Group of orthologs #4388. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:124

F6RDJ3              	100.00%		F1NAI1              	100.00%
                    	       		E1BSY3              	40.67%
Bootstrap support for F6RDJ3 as seed ortholog is 100%.
Bootstrap support for F1NAI1 as seed ortholog is 100%.

Group of orthologs #4389. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:124

F6Z2L4              	100.00%		F1NN84              	100.00%
                    	       		F1P4J1              	6.05%
Bootstrap support for F6Z2L4 as seed ortholog is 100%.
Bootstrap support for F1NN84 as seed ortholog is 100%.

Group of orthologs #4390. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:124

H2XMP3              	100.00%		F1NQF3              	100.00%
F6TKD8              	14.21%		
Bootstrap support for H2XMP3 as seed ortholog is 100%.
Bootstrap support for F1NQF3 as seed ortholog is 100%.

Group of orthologs #4391. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:124

F6X0T1              	100.00%		Q5F3E0              	100.00%
                    	       		Q5F3S2              	20.83%
Bootstrap support for F6X0T1 as seed ortholog is 100%.
Bootstrap support for Q5F3E0 as seed ortholog is 100%.

Group of orthologs #4392. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:124

F6TT48              	100.00%		E1BZQ8              	100.00%
Bootstrap support for F6TT48 as seed ortholog is 100%.
Bootstrap support for E1BZQ8 as seed ortholog is 100%.

Group of orthologs #4393. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:124

F6XC11              	100.00%		E1BUJ8              	100.00%
Bootstrap support for F6XC11 as seed ortholog is 100%.
Bootstrap support for E1BUJ8 as seed ortholog is 100%.

Group of orthologs #4394. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:124

F6R9B7              	100.00%		P02460              	100.00%
Bootstrap support for F6R9B7 as seed ortholog is 100%.
Bootstrap support for P02460 as seed ortholog is 100%.

Group of orthologs #4395. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:12

F6RRK4              	100.00%		Q00649              	100.00%
Bootstrap support for F6RRK4 as seed ortholog is 100%.
Bootstrap support for Q00649 as seed ortholog is 64%.
Alternative seed ortholog is P02504 (12 bits away from this cluster)

Group of orthologs #4396. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:124

H2XY09              	100.00%		F1NLW3              	100.00%
Bootstrap support for H2XY09 as seed ortholog is 100%.
Bootstrap support for F1NLW3 as seed ortholog is 100%.

Group of orthologs #4397. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:124

H2XQY4              	100.00%		H9KZX1              	100.00%
Bootstrap support for H2XQY4 as seed ortholog is 100%.
Bootstrap support for H9KZX1 as seed ortholog is 100%.

Group of orthologs #4398. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 G.gallus:124

H2Y0A6              	100.00%		F1P145              	100.00%
Bootstrap support for H2Y0A6 as seed ortholog is 100%.
Bootstrap support for F1P145 as seed ortholog is 100%.

Group of orthologs #4399. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 G.gallus:123

F6QD58              	100.00%		E1BWY9              	100.00%
F6ZAF3              	62.38%		
F6WIL0              	5.03%		
Bootstrap support for F6QD58 as seed ortholog is 67%.
Alternative seed ortholog is F6SPA0 (3 bits away from this cluster)
Bootstrap support for E1BWY9 as seed ortholog is 100%.

Group of orthologs #4400. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 G.gallus:123

F6WP45              	100.00%		F1NXX9              	100.00%
F6XA49              	78.53%		F1NN65              	7.09%
Bootstrap support for F6WP45 as seed ortholog is 100%.
Bootstrap support for F1NXX9 as seed ortholog is 100%.

Group of orthologs #4401. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 G.gallus:123

F6XFF8              	100.00%		E1BTD2              	100.00%
                    	       		E1C4J6              	21.38%
Bootstrap support for F6XFF8 as seed ortholog is 84%.
Bootstrap support for E1BTD2 as seed ortholog is 100%.

Group of orthologs #4402. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 G.gallus:123

H2XMF4              	100.00%		E1C5F2              	100.00%
Bootstrap support for H2XMF4 as seed ortholog is 100%.
Bootstrap support for E1C5F2 as seed ortholog is 100%.

Group of orthologs #4403. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 G.gallus:62

H2Y2X6              	100.00%		E1C786              	100.00%
Bootstrap support for H2Y2X6 as seed ortholog is 100%.
Bootstrap support for E1C786 as seed ortholog is 99%.

Group of orthologs #4404. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 G.gallus:12

H2XYJ8              	100.00%		P14839              	100.00%
Bootstrap support for H2XYJ8 as seed ortholog is 99%.
Bootstrap support for P14839 as seed ortholog is 90%.

Group of orthologs #4405. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 G.gallus:122

H2XNY4              	100.00%		Q5ZHP7              	100.00%
                    	       		E1BR66              	21.59%
Bootstrap support for H2XNY4 as seed ortholog is 100%.
Bootstrap support for Q5ZHP7 as seed ortholog is 100%.

Group of orthologs #4406. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 G.gallus:122

H2XN89              	100.00%		E1BXT5              	100.00%
Bootstrap support for H2XN89 as seed ortholog is 100%.
Bootstrap support for E1BXT5 as seed ortholog is 100%.

Group of orthologs #4407. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 G.gallus:122

F7A0C5              	100.00%		F1N9S4              	100.00%
Bootstrap support for F7A0C5 as seed ortholog is 100%.
Bootstrap support for F1N9S4 as seed ortholog is 100%.

Group of orthologs #4408. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 G.gallus:42

H2XNP6              	100.00%		E1C6N4              	100.00%
Bootstrap support for H2XNP6 as seed ortholog is 97%.
Bootstrap support for E1C6N4 as seed ortholog is 97%.

Group of orthologs #4409. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 G.gallus:122

F7A6H8              	100.00%		F1NTI0              	100.00%
Bootstrap support for F7A6H8 as seed ortholog is 95%.
Bootstrap support for F1NTI0 as seed ortholog is 100%.

Group of orthologs #4410. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 G.gallus:122

H2XRA3              	100.00%		F1NZC5              	100.00%
Bootstrap support for H2XRA3 as seed ortholog is 100%.
Bootstrap support for F1NZC5 as seed ortholog is 100%.

Group of orthologs #4411. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 G.gallus:31

H2XPR0              	100.00%		F1NW22              	100.00%
                    	       		F1P5M4              	49.36%
                    	       		F1NUA6              	30.90%
Bootstrap support for H2XPR0 as seed ortholog is 68%.
Alternative seed ortholog is F6Q349 (13 bits away from this cluster)
Bootstrap support for F1NW22 as seed ortholog is 84%.

Group of orthologs #4412. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:121

F6S0A3              	100.00%		F1NKD2              	100.00%
                    	       		E1C167              	7.12%
Bootstrap support for F6S0A3 as seed ortholog is 100%.
Bootstrap support for F1NKD2 as seed ortholog is 100%.

Group of orthologs #4413. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:121

F6PM15              	100.00%		E1C658              	100.00%
Bootstrap support for F6PM15 as seed ortholog is 100%.
Bootstrap support for E1C658 as seed ortholog is 100%.

Group of orthologs #4414. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:121

F6PW43              	100.00%		F1NEH7              	100.00%
Bootstrap support for F6PW43 as seed ortholog is 100%.
Bootstrap support for F1NEH7 as seed ortholog is 100%.

Group of orthologs #4415. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:121

F6YWH4              	100.00%		E1BRT9              	100.00%
Bootstrap support for F6YWH4 as seed ortholog is 100%.
Bootstrap support for E1BRT9 as seed ortholog is 100%.

Group of orthologs #4416. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:31

F6SV73              	100.00%		F1N8S8              	100.00%
Bootstrap support for F6SV73 as seed ortholog is 100%.
Bootstrap support for F1N8S8 as seed ortholog is 67%.
Alternative seed ortholog is F1NMQ4 (31 bits away from this cluster)

Group of orthologs #4417. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:121

F6RW32              	100.00%		H9L222              	100.00%
Bootstrap support for F6RW32 as seed ortholog is 100%.
Bootstrap support for H9L222 as seed ortholog is 100%.

Group of orthologs #4418. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:121

H2XYR3              	100.00%		E1BWV6              	100.00%
Bootstrap support for H2XYR3 as seed ortholog is 100%.
Bootstrap support for E1BWV6 as seed ortholog is 100%.

Group of orthologs #4419. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:121

F7AD14              	100.00%		F1NLM2              	100.00%
Bootstrap support for F7AD14 as seed ortholog is 100%.
Bootstrap support for F1NLM2 as seed ortholog is 100%.

Group of orthologs #4420. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:121

F6UG66              	100.00%		P32046              	100.00%
Bootstrap support for F6UG66 as seed ortholog is 100%.
Bootstrap support for P32046 as seed ortholog is 100%.

Group of orthologs #4421. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 G.gallus:121

H2XX36              	100.00%		F1NSC1              	100.00%
Bootstrap support for H2XX36 as seed ortholog is 82%.
Bootstrap support for F1NSC1 as seed ortholog is 100%.

Group of orthologs #4422. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:121

H2XRJ8              	100.00%		F1P2F4              	100.00%
Bootstrap support for H2XRJ8 as seed ortholog is 100%.
Bootstrap support for F1P2F4 as seed ortholog is 100%.

Group of orthologs #4423. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:0

H2Y255              	100.00%		H9KZ00              	100.00%
Bootstrap support for H2Y255 as seed ortholog is 100%.
Bootstrap support for H9KZ00 as seed ortholog is 51%.
Alternative seed ortholog is F1NBR5 (0 bits away from this cluster)

Group of orthologs #4424. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 G.gallus:48

Q4H3E8              	100.00%		P53545              	100.00%
Bootstrap support for Q4H3E8 as seed ortholog is 100%.
Bootstrap support for P53545 as seed ortholog is 93%.

Group of orthologs #4425. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 G.gallus:120

F6QG58              	100.00%		F1NZH9              	100.00%
Bootstrap support for F6QG58 as seed ortholog is 60%.
Alternative seed ortholog is F6TQG1 (7 bits away from this cluster)
Bootstrap support for F1NZH9 as seed ortholog is 100%.

Group of orthologs #4426. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 G.gallus:120

F7AQ31              	100.00%		F1NC55              	100.00%
Bootstrap support for F7AQ31 as seed ortholog is 100%.
Bootstrap support for F1NC55 as seed ortholog is 100%.

Group of orthologs #4427. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 G.gallus:120

H2XU03              	100.00%		E1C2H4              	100.00%
Bootstrap support for H2XU03 as seed ortholog is 100%.
Bootstrap support for E1C2H4 as seed ortholog is 100%.

Group of orthologs #4428. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 G.gallus:120

F6YNB1              	100.00%		F1NW39              	100.00%
Bootstrap support for F6YNB1 as seed ortholog is 100%.
Bootstrap support for F1NW39 as seed ortholog is 100%.

Group of orthologs #4429. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 G.gallus:120

H2XLY8              	100.00%		F1NJP6              	100.00%
Bootstrap support for H2XLY8 as seed ortholog is 100%.
Bootstrap support for F1NJP6 as seed ortholog is 100%.

Group of orthologs #4430. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 G.gallus:120

F6YE29              	100.00%		F1P3Y5              	100.00%
Bootstrap support for F6YE29 as seed ortholog is 100%.
Bootstrap support for F1P3Y5 as seed ortholog is 100%.

Group of orthologs #4431. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:119

F6XFA2              	100.00%		F1NDB1              	100.00%
                    	       		E1C6R7              	7.81%
                    	       		F1P0S4              	6.17%
Bootstrap support for F6XFA2 as seed ortholog is 100%.
Bootstrap support for F1NDB1 as seed ortholog is 100%.

Group of orthologs #4432. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:119

H2XYG4              	100.00%		E1BWM5              	100.00%
                    	       		F1NXV8              	37.37%
Bootstrap support for H2XYG4 as seed ortholog is 100%.
Bootstrap support for E1BWM5 as seed ortholog is 100%.

Group of orthologs #4433. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:119

H2XM94              	100.00%		F1NNM4              	100.00%
                    	       		F1NKS1              	30.97%
Bootstrap support for H2XM94 as seed ortholog is 100%.
Bootstrap support for F1NNM4 as seed ortholog is 100%.

Group of orthologs #4434. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:119

F6TJA8              	100.00%		E1BVM7              	100.00%
Bootstrap support for F6TJA8 as seed ortholog is 100%.
Bootstrap support for E1BVM7 as seed ortholog is 100%.

Group of orthologs #4435. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:119

F6QY65              	100.00%		F1NJK3              	100.00%
Bootstrap support for F6QY65 as seed ortholog is 100%.
Bootstrap support for F1NJK3 as seed ortholog is 100%.

Group of orthologs #4436. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:119

F6XU26              	100.00%		E1C1J3              	100.00%
Bootstrap support for F6XU26 as seed ortholog is 100%.
Bootstrap support for E1C1J3 as seed ortholog is 100%.

Group of orthologs #4437. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:119

F6ZED0              	100.00%		E1BXI3              	100.00%
Bootstrap support for F6ZED0 as seed ortholog is 100%.
Bootstrap support for E1BXI3 as seed ortholog is 100%.

Group of orthologs #4438. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:119

F6WVC9              	100.00%		F1NE74              	100.00%
Bootstrap support for F6WVC9 as seed ortholog is 100%.
Bootstrap support for F1NE74 as seed ortholog is 100%.

Group of orthologs #4439. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:119

H2XT15              	100.00%		E1BWE1              	100.00%
Bootstrap support for H2XT15 as seed ortholog is 100%.
Bootstrap support for E1BWE1 as seed ortholog is 100%.

Group of orthologs #4440. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:119

H2XSJ3              	100.00%		F1NJR2              	100.00%
Bootstrap support for H2XSJ3 as seed ortholog is 100%.
Bootstrap support for F1NJR2 as seed ortholog is 100%.

Group of orthologs #4441. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:119

F6VQ85              	100.00%		Q90830              	100.00%
Bootstrap support for F6VQ85 as seed ortholog is 100%.
Bootstrap support for Q90830 as seed ortholog is 100%.

Group of orthologs #4442. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 G.gallus:119

H2XZ89              	100.00%		F1NJG8              	100.00%
Bootstrap support for H2XZ89 as seed ortholog is 77%.
Bootstrap support for F1NJG8 as seed ortholog is 100%.

Group of orthologs #4443. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 G.gallus:119

F6ZM16              	100.00%		Q5ZML6              	100.00%
Bootstrap support for F6ZM16 as seed ortholog is 100%.
Bootstrap support for Q5ZML6 as seed ortholog is 100%.

Group of orthologs #4444. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 G.gallus:118

H2Y1S2              	100.00%		F1NK00              	100.00%
                    	       		F1NUD0              	12.22%
                    	       		P79772              	5.76%
Bootstrap support for H2Y1S2 as seed ortholog is 100%.
Bootstrap support for F1NK00 as seed ortholog is 100%.

Group of orthologs #4445. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 G.gallus:118

Q9NDP3              	100.00%		F1NQA3              	100.00%
                    	       		Q5ZLB9              	21.68%
                    	       		F1NYT4              	18.11%
Bootstrap support for Q9NDP3 as seed ortholog is 100%.
Bootstrap support for F1NQA3 as seed ortholog is 100%.

Group of orthologs #4446. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 G.gallus:118

F6Q8S1              	100.00%		F1NKT0              	100.00%
                    	       		F1NZ00              	11.44%
Bootstrap support for F6Q8S1 as seed ortholog is 100%.
Bootstrap support for F1NKT0 as seed ortholog is 100%.

Group of orthologs #4447. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 G.gallus:26

F6WH63              	100.00%		F1NSB3              	100.00%
                    	       		E1C4V8              	17.29%
Bootstrap support for F6WH63 as seed ortholog is 98%.
Bootstrap support for F1NSB3 as seed ortholog is 75%.

Group of orthologs #4448. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 G.gallus:118

F7AZM4              	100.00%		E1BXG3              	100.00%
Bootstrap support for F7AZM4 as seed ortholog is 100%.
Bootstrap support for E1BXG3 as seed ortholog is 100%.

Group of orthologs #4449. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 G.gallus:118

F6SXJ8              	100.00%		F1NP66              	100.00%
Bootstrap support for F6SXJ8 as seed ortholog is 100%.
Bootstrap support for F1NP66 as seed ortholog is 100%.

Group of orthologs #4450. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 G.gallus:118

H2XU50              	100.00%		E1BQ47              	100.00%
Bootstrap support for H2XU50 as seed ortholog is 100%.
Bootstrap support for E1BQ47 as seed ortholog is 100%.

Group of orthologs #4451. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 G.gallus:118

F6YCH9              	100.00%		F1NQ68              	100.00%
Bootstrap support for F6YCH9 as seed ortholog is 100%.
Bootstrap support for F1NQ68 as seed ortholog is 100%.

Group of orthologs #4452. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 G.gallus:118

F7ALL0              	100.00%		F1NHT8              	100.00%
Bootstrap support for F7ALL0 as seed ortholog is 100%.
Bootstrap support for F1NHT8 as seed ortholog is 100%.

Group of orthologs #4453. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 G.gallus:118

H2Y1B5              	100.00%		E1BU66              	100.00%
Bootstrap support for H2Y1B5 as seed ortholog is 100%.
Bootstrap support for E1BU66 as seed ortholog is 100%.

Group of orthologs #4454. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 G.gallus:118

H2XWJ8              	100.00%		E1C4C0              	100.00%
Bootstrap support for H2XWJ8 as seed ortholog is 100%.
Bootstrap support for E1C4C0 as seed ortholog is 100%.

Group of orthologs #4455. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 G.gallus:117

F6TV99              	100.00%		Q5ZMQ8              	100.00%
                    	       		F1N995              	36.18%
Bootstrap support for F6TV99 as seed ortholog is 90%.
Bootstrap support for Q5ZMQ8 as seed ortholog is 100%.

Group of orthologs #4456. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 G.gallus:117

F6UTS4              	100.00%		F1N857              	100.00%
Bootstrap support for F6UTS4 as seed ortholog is 100%.
Bootstrap support for F1N857 as seed ortholog is 100%.

Group of orthologs #4457. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 G.gallus:117

F7BGS1              	100.00%		E1BUX5              	100.00%
Bootstrap support for F7BGS1 as seed ortholog is 100%.
Bootstrap support for E1BUX5 as seed ortholog is 100%.

Group of orthologs #4458. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 G.gallus:117

F6TVI5              	100.00%		F1NNV6              	100.00%
Bootstrap support for F6TVI5 as seed ortholog is 100%.
Bootstrap support for F1NNV6 as seed ortholog is 100%.

Group of orthologs #4459. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 G.gallus:117

H2XV19              	100.00%		E1BQ58              	100.00%
Bootstrap support for H2XV19 as seed ortholog is 100%.
Bootstrap support for E1BQ58 as seed ortholog is 100%.

Group of orthologs #4460. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 G.gallus:72

H2XYW1              	100.00%		E1BS93              	100.00%
Bootstrap support for H2XYW1 as seed ortholog is 100%.
Bootstrap support for E1BS93 as seed ortholog is 97%.

Group of orthologs #4461. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 G.gallus:117

F6ZER2              	100.00%		F1NQ89              	100.00%
Bootstrap support for F6ZER2 as seed ortholog is 100%.
Bootstrap support for F1NQ89 as seed ortholog is 100%.

Group of orthologs #4462. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 G.gallus:117

H2XNI9              	100.00%		F1NJR0              	100.00%
Bootstrap support for H2XNI9 as seed ortholog is 100%.
Bootstrap support for F1NJR0 as seed ortholog is 100%.

Group of orthologs #4463. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 G.gallus:36

H2XTL6              	100.00%		F1NLG6              	100.00%
Bootstrap support for H2XTL6 as seed ortholog is 98%.
Bootstrap support for F1NLG6 as seed ortholog is 87%.

Group of orthologs #4464. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 G.gallus:117

H2XVB4              	100.00%		F1NK54              	100.00%
Bootstrap support for H2XVB4 as seed ortholog is 99%.
Bootstrap support for F1NK54 as seed ortholog is 100%.

Group of orthologs #4465. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 G.gallus:117

Q4H3S2              	100.00%		F1P4A1              	100.00%
Bootstrap support for Q4H3S2 as seed ortholog is 100%.
Bootstrap support for F1P4A1 as seed ortholog is 100%.

Group of orthologs #4466. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 G.gallus:70

F6R497              	100.00%		E1BU19              	100.00%
F6XTC5              	34.77%		E1BT50              	20.31%
Bootstrap support for F6R497 as seed ortholog is 95%.
Bootstrap support for E1BU19 as seed ortholog is 97%.

Group of orthologs #4467. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:116

F6XM37              	100.00%		E1C3C6              	100.00%
                    	       		E1BVK7              	18.75%
Bootstrap support for F6XM37 as seed ortholog is 100%.
Bootstrap support for E1C3C6 as seed ortholog is 100%.

Group of orthologs #4468. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:116

F6YG06              	100.00%		F1P3I0              	100.00%
                    	       		F1NUG3              	23.02%
Bootstrap support for F6YG06 as seed ortholog is 100%.
Bootstrap support for F1P3I0 as seed ortholog is 100%.

Group of orthologs #4469. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:116

F7A435              	100.00%		Q5ZM86              	100.00%
                    	       		E1BYG9              	81.50%
Bootstrap support for F7A435 as seed ortholog is 100%.
Bootstrap support for Q5ZM86 as seed ortholog is 100%.

Group of orthologs #4470. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:116

Q4H3J9              	100.00%		P11939              	100.00%
                    	       		P18625              	20.23%
Bootstrap support for Q4H3J9 as seed ortholog is 100%.
Bootstrap support for P11939 as seed ortholog is 100%.

Group of orthologs #4471. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:116

F6TAL4              	100.00%		E1C0E2              	100.00%
Bootstrap support for F6TAL4 as seed ortholog is 100%.
Bootstrap support for E1C0E2 as seed ortholog is 100%.

Group of orthologs #4472. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:116

F6SWZ3              	100.00%		F1NZW6              	100.00%
Bootstrap support for F6SWZ3 as seed ortholog is 100%.
Bootstrap support for F1NZW6 as seed ortholog is 100%.

Group of orthologs #4473. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:116

H2XM31              	100.00%		E1C9A2              	100.00%
Bootstrap support for H2XM31 as seed ortholog is 100%.
Bootstrap support for E1C9A2 as seed ortholog is 100%.

Group of orthologs #4474. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:116

H2XYR7              	100.00%		F1P533              	100.00%
Bootstrap support for H2XYR7 as seed ortholog is 100%.
Bootstrap support for F1P533 as seed ortholog is 100%.

Group of orthologs #4475. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:116

H2XW44              	100.00%		Q90839              	100.00%
Bootstrap support for H2XW44 as seed ortholog is 100%.
Bootstrap support for Q90839 as seed ortholog is 100%.

Group of orthologs #4476. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 G.gallus:116

H2XZI3              	100.00%		Q5ZII6              	100.00%
Bootstrap support for H2XZI3 as seed ortholog is 100%.
Bootstrap support for Q5ZII6 as seed ortholog is 100%.

Group of orthologs #4477. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 G.gallus:57

F6SZH9              	100.00%		E1C918              	100.00%
                    	       		E1BTS9              	50.37%
                    	       		Q5ZJG2              	27.84%
                    	       		F1P595              	17.77%
Bootstrap support for F6SZH9 as seed ortholog is 78%.
Bootstrap support for E1C918 as seed ortholog is 95%.

Group of orthologs #4478. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 G.gallus:115

F6YYF3              	100.00%		F1P573              	100.00%
F6SY47              	94.31%		
Bootstrap support for F6YYF3 as seed ortholog is 100%.
Bootstrap support for F1P573 as seed ortholog is 100%.

Group of orthologs #4479. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 G.gallus:67

H2Y1Z7              	100.00%		E1C7L4              	100.00%
                    	       		Q5ZKK0              	6.86%
Bootstrap support for H2Y1Z7 as seed ortholog is 100%.
Bootstrap support for E1C7L4 as seed ortholog is 99%.

Group of orthologs #4480. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 G.gallus:115

H2XRT0              	100.00%		F1NNT8              	100.00%
                    	       		F1NGJ9              	16.35%
Bootstrap support for H2XRT0 as seed ortholog is 99%.
Bootstrap support for F1NNT8 as seed ortholog is 100%.

Group of orthologs #4481. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 G.gallus:115

F7ARN8              	100.00%		H9L007              	100.00%
                    	       		H9L3U0              	64.19%
Bootstrap support for F7ARN8 as seed ortholog is 100%.
Bootstrap support for H9L007 as seed ortholog is 100%.

Group of orthologs #4482. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 G.gallus:115

F6ZA49              	100.00%		Q9IAY5              	100.00%
H2Y0K0              	10.73%		
Bootstrap support for F6ZA49 as seed ortholog is 100%.
Bootstrap support for Q9IAY5 as seed ortholog is 100%.

Group of orthologs #4483. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 G.gallus:115

F6WKB8              	100.00%		E1BZH1              	100.00%
Bootstrap support for F6WKB8 as seed ortholog is 100%.
Bootstrap support for E1BZH1 as seed ortholog is 100%.

Group of orthologs #4484. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 G.gallus:115

F6SKP5              	100.00%		F1NZT4              	100.00%
Bootstrap support for F6SKP5 as seed ortholog is 100%.
Bootstrap support for F1NZT4 as seed ortholog is 100%.

Group of orthologs #4485. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 G.gallus:72

H2XRF7              	100.00%		F1NYS6              	100.00%
Bootstrap support for H2XRF7 as seed ortholog is 100%.
Bootstrap support for F1NYS6 as seed ortholog is 99%.

Group of orthologs #4486. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 G.gallus:19

H2XX28              	100.00%		H9KZV5              	100.00%
Bootstrap support for H2XX28 as seed ortholog is 90%.
Bootstrap support for H9KZV5 as seed ortholog is 40%.
Alternative seed ortholog is F1NZD3 (19 bits away from this cluster)

Group of orthologs #4487. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:46

F6VUI1              	100.00%		F1NPH6              	100.00%
                    	       		F1NKR7              	7.65%
Bootstrap support for F6VUI1 as seed ortholog is 100%.
Bootstrap support for F1NPH6 as seed ortholog is 97%.

Group of orthologs #4488. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:114

F6Y7L6              	100.00%		Q5F477              	100.00%
                    	       		F1NV10              	99.09%
Bootstrap support for F6Y7L6 as seed ortholog is 100%.
Bootstrap support for Q5F477 as seed ortholog is 100%.

Group of orthologs #4489. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:114

Q4H3R0              	100.00%		O73755              	100.00%
                    	       		E1C1D4              	30.15%
Bootstrap support for Q4H3R0 as seed ortholog is 100%.
Bootstrap support for O73755 as seed ortholog is 100%.

Group of orthologs #4490. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:52

F6YUX9              	100.00%		E1C0G3              	100.00%
Bootstrap support for F6YUX9 as seed ortholog is 100%.
Bootstrap support for E1C0G3 as seed ortholog is 99%.

Group of orthologs #4491. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:114

F6S3H3              	100.00%		F1NKJ7              	100.00%
Bootstrap support for F6S3H3 as seed ortholog is 100%.
Bootstrap support for F1NKJ7 as seed ortholog is 100%.

Group of orthologs #4492. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:114

F6UAV0              	100.00%		F1NG31              	100.00%
Bootstrap support for F6UAV0 as seed ortholog is 100%.
Bootstrap support for F1NG31 as seed ortholog is 100%.

Group of orthologs #4493. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 G.gallus:114

F6V4V8              	100.00%		F1NDI1              	100.00%
Bootstrap support for F6V4V8 as seed ortholog is 99%.
Bootstrap support for F1NDI1 as seed ortholog is 100%.

Group of orthologs #4494. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 G.gallus:43

F6YHK2              	100.00%		F1NB99              	100.00%
Bootstrap support for F6YHK2 as seed ortholog is 98%.
Bootstrap support for F1NB99 as seed ortholog is 95%.

Group of orthologs #4495. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:114

H2XLY3              	100.00%		E1C7W4              	100.00%
Bootstrap support for H2XLY3 as seed ortholog is 100%.
Bootstrap support for E1C7W4 as seed ortholog is 100%.

Group of orthologs #4496. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:114

F6X709              	100.00%		F1NTY2              	100.00%
Bootstrap support for F6X709 as seed ortholog is 100%.
Bootstrap support for F1NTY2 as seed ortholog is 100%.

Group of orthologs #4497. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 G.gallus:114

F6W881              	100.00%		Q8AXL1              	100.00%
Bootstrap support for F6W881 as seed ortholog is 100%.
Bootstrap support for Q8AXL1 as seed ortholog is 100%.

Group of orthologs #4498. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 G.gallus:24

F6TZY2              	100.00%		F1NGK2              	100.00%
F6TZQ2              	86.97%		F1NXC2              	22.06%
                    	       		Q7ZZS5              	19.57%
Bootstrap support for F6TZY2 as seed ortholog is 88%.
Bootstrap support for F1NGK2 as seed ortholog is 86%.

Group of orthologs #4499. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:113

F6QVB5              	100.00%		F1NYK5              	100.00%
                    	       		Q5ZLK8              	99.63%
Bootstrap support for F6QVB5 as seed ortholog is 100%.
Bootstrap support for F1NYK5 as seed ortholog is 100%.

Group of orthologs #4500. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:113

F6PZ36              	100.00%		Q5ZHM6              	100.00%
                    	       		E1BRA5              	53.54%
Bootstrap support for F6PZ36 as seed ortholog is 100%.
Bootstrap support for Q5ZHM6 as seed ortholog is 100%.

Group of orthologs #4501. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:25

F6WCG9              	100.00%		P79795              	100.00%
                    	       		F1NTU8              	37.57%
Bootstrap support for F6WCG9 as seed ortholog is 100%.
Bootstrap support for P79795 as seed ortholog is 71%.
Alternative seed ortholog is E1BYZ2 (25 bits away from this cluster)

Group of orthologs #4502. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 G.gallus:113

F6YLP6              	100.00%		O93353              	100.00%
                    	       		E1BZG3              	44.28%
Bootstrap support for F6YLP6 as seed ortholog is 71%.
Alternative seed ortholog is Q4H3C6 (9 bits away from this cluster)
Bootstrap support for O93353 as seed ortholog is 100%.

Group of orthologs #4503. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:113

F6QFG5              	100.00%		E1BTS3              	100.00%
Bootstrap support for F6QFG5 as seed ortholog is 100%.
Bootstrap support for E1BTS3 as seed ortholog is 100%.

Group of orthologs #4504. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:113

F6XD32              	100.00%		E1BU25              	100.00%
Bootstrap support for F6XD32 as seed ortholog is 100%.
Bootstrap support for E1BU25 as seed ortholog is 100%.

Group of orthologs #4505. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:113

F6XYG2              	100.00%		E1BTV0              	100.00%
Bootstrap support for F6XYG2 as seed ortholog is 100%.
Bootstrap support for E1BTV0 as seed ortholog is 100%.

Group of orthologs #4506. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:113

F6ZGM2              	100.00%		E1C068              	100.00%
Bootstrap support for F6ZGM2 as seed ortholog is 100%.
Bootstrap support for E1C068 as seed ortholog is 100%.

Group of orthologs #4507. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:113

F7BLF3              	100.00%		E1C598              	100.00%
Bootstrap support for F7BLF3 as seed ortholog is 100%.
Bootstrap support for E1C598 as seed ortholog is 100%.

Group of orthologs #4508. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:113

H2Y3A1              	100.00%		E1BRC4              	100.00%
Bootstrap support for H2Y3A1 as seed ortholog is 100%.
Bootstrap support for E1BRC4 as seed ortholog is 100%.

Group of orthologs #4509. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:113

F6YMZ5              	100.00%		F1NTT2              	100.00%
Bootstrap support for F6YMZ5 as seed ortholog is 100%.
Bootstrap support for F1NTT2 as seed ortholog is 100%.

Group of orthologs #4510. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:113

F6W5E5              	100.00%		H9KZG4              	100.00%
Bootstrap support for F6W5E5 as seed ortholog is 100%.
Bootstrap support for H9KZG4 as seed ortholog is 100%.

Group of orthologs #4511. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:113

F7B2I2              	100.00%		F1NPM6              	100.00%
Bootstrap support for F7B2I2 as seed ortholog is 100%.
Bootstrap support for F1NPM6 as seed ortholog is 100%.

Group of orthologs #4512. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:113

F7BAL4              	100.00%		F1NVF9              	100.00%
Bootstrap support for F7BAL4 as seed ortholog is 100%.
Bootstrap support for F1NVF9 as seed ortholog is 100%.

Group of orthologs #4513. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 G.gallus:113

H2Y1I8              	100.00%		F1P2Y3              	100.00%
Bootstrap support for H2Y1I8 as seed ortholog is 100%.
Bootstrap support for F1P2Y3 as seed ortholog is 100%.

Group of orthologs #4514. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 G.gallus:112

F6RAE8              	100.00%		Q5F4B2              	100.00%
                    	       		F1NH72              	39.37%
Bootstrap support for F6RAE8 as seed ortholog is 100%.
Bootstrap support for Q5F4B2 as seed ortholog is 100%.

Group of orthologs #4515. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 G.gallus:56

F6Q4V5              	100.00%		E1C7A9              	100.00%
Bootstrap support for F6Q4V5 as seed ortholog is 99%.
Bootstrap support for E1C7A9 as seed ortholog is 99%.

Group of orthologs #4516. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 G.gallus:112

H2XJX3              	100.00%		F1NQW9              	100.00%
Bootstrap support for H2XJX3 as seed ortholog is 100%.
Bootstrap support for F1NQW9 as seed ortholog is 100%.

Group of orthologs #4517. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:111

F6WTV6              	100.00%		F1NA26              	100.00%
                    	       		F1N8E2              	57.09%
                    	       		F1NBL9              	34.68%
                    	       		F1NTW1              	25.39%
Bootstrap support for F6WTV6 as seed ortholog is 100%.
Bootstrap support for F1NA26 as seed ortholog is 100%.

Group of orthologs #4518. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:44

H2Y170              	100.00%		Q90ZD5              	100.00%
                    	       		F1P539              	28.23%
Bootstrap support for H2Y170 as seed ortholog is 100%.
Bootstrap support for Q90ZD5 as seed ortholog is 57%.
Alternative seed ortholog is F1NMJ0 (44 bits away from this cluster)

Group of orthologs #4519. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:111

F6TBA1              	100.00%		E1C444              	100.00%
Bootstrap support for F6TBA1 as seed ortholog is 100%.
Bootstrap support for E1C444 as seed ortholog is 100%.

Group of orthologs #4520. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 G.gallus:13

F6XV61              	100.00%		E1BUS1              	100.00%
Bootstrap support for F6XV61 as seed ortholog is 78%.
Bootstrap support for E1BUS1 as seed ortholog is 68%.
Alternative seed ortholog is E1C2T3 (13 bits away from this cluster)

Group of orthologs #4521. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:111

F6XMV6              	100.00%		E1BXE0              	100.00%
Bootstrap support for F6XMV6 as seed ortholog is 100%.
Bootstrap support for E1BXE0 as seed ortholog is 100%.

Group of orthologs #4522. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:111

F6Q476              	100.00%		F1NQ15              	100.00%
Bootstrap support for F6Q476 as seed ortholog is 100%.
Bootstrap support for F1NQ15 as seed ortholog is 100%.

Group of orthologs #4523. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:111

F7A3X7              	100.00%		F1N858              	100.00%
Bootstrap support for F7A3X7 as seed ortholog is 100%.
Bootstrap support for F1N858 as seed ortholog is 100%.

Group of orthologs #4524. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:111

H2Y340              	100.00%		E1BQP4              	100.00%
Bootstrap support for H2Y340 as seed ortholog is 100%.
Bootstrap support for E1BQP4 as seed ortholog is 100%.

Group of orthologs #4525. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:111

F7AGE4              	100.00%		F1NP84              	100.00%
Bootstrap support for F7AGE4 as seed ortholog is 100%.
Bootstrap support for F1NP84 as seed ortholog is 100%.

Group of orthologs #4526. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:111

F6YPQ4              	100.00%		F1NXP8              	100.00%
Bootstrap support for F6YPQ4 as seed ortholog is 100%.
Bootstrap support for F1NXP8 as seed ortholog is 100%.

Group of orthologs #4527. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:111

H2XUZ6              	100.00%		E1C8G7              	100.00%
Bootstrap support for H2XUZ6 as seed ortholog is 100%.
Bootstrap support for E1C8G7 as seed ortholog is 100%.

Group of orthologs #4528. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:111

H2XQN1              	100.00%		F1NQ90              	100.00%
Bootstrap support for H2XQN1 as seed ortholog is 100%.
Bootstrap support for F1NQ90 as seed ortholog is 100%.

Group of orthologs #4529. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:111

H2XRH0              	100.00%		F1NU26              	100.00%
Bootstrap support for H2XRH0 as seed ortholog is 100%.
Bootstrap support for F1NU26 as seed ortholog is 100%.

Group of orthologs #4530. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 G.gallus:111

H2XUQ9              	100.00%		H9L0G0              	100.00%
Bootstrap support for H2XUQ9 as seed ortholog is 100%.
Bootstrap support for H9L0G0 as seed ortholog is 100%.

Group of orthologs #4531. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 G.gallus:35

F7AT24              	100.00%		Q9PWA0              	100.00%
                    	       		Q9PWA1              	55.18%
Bootstrap support for F7AT24 as seed ortholog is 98%.
Bootstrap support for Q9PWA0 as seed ortholog is 94%.

Group of orthologs #4532. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 G.gallus:110

H2Y315              	100.00%		Q5ZKC5              	100.00%
                    	       		F1NP49              	40.94%
Bootstrap support for H2Y315 as seed ortholog is 100%.
Bootstrap support for Q5ZKC5 as seed ortholog is 100%.

Group of orthologs #4533. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 G.gallus:110

F6SFT9              	100.00%		F1NC21              	100.00%
Bootstrap support for F6SFT9 as seed ortholog is 100%.
Bootstrap support for F1NC21 as seed ortholog is 100%.

Group of orthologs #4534. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 G.gallus:110

H2XX91              	100.00%		E1BV14              	100.00%
Bootstrap support for H2XX91 as seed ortholog is 100%.
Bootstrap support for E1BV14 as seed ortholog is 100%.

Group of orthologs #4535. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 G.gallus:110

H2XMF0              	100.00%		F1NND9              	100.00%
Bootstrap support for H2XMF0 as seed ortholog is 100%.
Bootstrap support for F1NND9 as seed ortholog is 100%.

Group of orthologs #4536. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 G.gallus:110

H2XY24              	100.00%		F1P2A4              	100.00%
Bootstrap support for H2XY24 as seed ortholog is 100%.
Bootstrap support for F1P2A4 as seed ortholog is 100%.

Group of orthologs #4537. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 G.gallus:110

Q1RL63              	100.00%		Q5ZMM5              	100.00%
Bootstrap support for Q1RL63 as seed ortholog is 100%.
Bootstrap support for Q5ZMM5 as seed ortholog is 100%.

Group of orthologs #4538. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 G.gallus:109

H2Y1C6              	100.00%		P13914              	100.00%
F6ZDE8              	8.45%		E1C5Y2              	99.80%
                    	       		F1P5U3              	59.10%
                    	       		F1P5U4              	52.97%
Bootstrap support for H2Y1C6 as seed ortholog is 100%.
Bootstrap support for P13914 as seed ortholog is 100%.

Group of orthologs #4539. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 G.gallus:109

F6X728              	100.00%		E1BT89              	100.00%
                    	       		F1NAD8              	17.97%
                    	       		F1NZM2              	7.50%
Bootstrap support for F6X728 as seed ortholog is 100%.
Bootstrap support for E1BT89 as seed ortholog is 100%.

Group of orthologs #4540. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 G.gallus:37

F6TE72              	100.00%		E1BT24              	100.00%
Bootstrap support for F6TE72 as seed ortholog is 84%.
Bootstrap support for E1BT24 as seed ortholog is 90%.

Group of orthologs #4541. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 G.gallus:109

F6R4A6              	100.00%		F1NB05              	100.00%
Bootstrap support for F6R4A6 as seed ortholog is 100%.
Bootstrap support for F1NB05 as seed ortholog is 100%.

Group of orthologs #4542. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 G.gallus:109

F6Y9H6              	100.00%		E1BVT7              	100.00%
Bootstrap support for F6Y9H6 as seed ortholog is 100%.
Bootstrap support for E1BVT7 as seed ortholog is 100%.

Group of orthologs #4543. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 G.gallus:109

F6UVD1              	100.00%		E1C6F1              	100.00%
Bootstrap support for F6UVD1 as seed ortholog is 100%.
Bootstrap support for E1C6F1 as seed ortholog is 100%.

Group of orthologs #4544. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 G.gallus:109

F6PUA9              	100.00%		F1NST0              	100.00%
Bootstrap support for F6PUA9 as seed ortholog is 100%.
Bootstrap support for F1NST0 as seed ortholog is 100%.

Group of orthologs #4545. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 G.gallus:109

H2XUK0              	100.00%		E1C437              	100.00%
Bootstrap support for H2XUK0 as seed ortholog is 100%.
Bootstrap support for E1C437 as seed ortholog is 100%.

Group of orthologs #4546. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 G.gallus:109

H2Y3D9              	100.00%		E1BUT4              	100.00%
Bootstrap support for H2Y3D9 as seed ortholog is 100%.
Bootstrap support for E1BUT4 as seed ortholog is 100%.

Group of orthologs #4547. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 G.gallus:109

F6SGK9              	100.00%		Q5ZHK9              	100.00%
Bootstrap support for F6SGK9 as seed ortholog is 100%.
Bootstrap support for Q5ZHK9 as seed ortholog is 100%.

Group of orthologs #4548. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 G.gallus:109

Q8T885              	100.00%		F1NHW9              	100.00%
Bootstrap support for Q8T885 as seed ortholog is 100%.
Bootstrap support for F1NHW9 as seed ortholog is 100%.

Group of orthologs #4549. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 G.gallus:108

F6Y4T2              	100.00%		E1C3Z9              	100.00%
                    	       		Q5F482              	22.00%
                    	       		F1NRI6              	10.35%
Bootstrap support for F6Y4T2 as seed ortholog is 59%.
Alternative seed ortholog is H2Y1N8 (11 bits away from this cluster)
Bootstrap support for E1C3Z9 as seed ortholog is 100%.

Group of orthologs #4550. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

H2Y0G6              	100.00%		E1C765              	100.00%
                    	       		E1C6X8              	40.02%
Bootstrap support for H2Y0G6 as seed ortholog is 100%.
Bootstrap support for E1C765 as seed ortholog is 100%.

Group of orthologs #4551. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:53

F6YXQ0              	100.00%		P08629              	100.00%
H2XXT0              	100.00%		
Bootstrap support for F6YXQ0 as seed ortholog is 100%.
Bootstrap support for H2XXT0 as seed ortholog is 100%.
Bootstrap support for P08629 as seed ortholog is 99%.

Group of orthologs #4552. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

H2XN37              	100.00%		F1P330              	100.00%
                    	       		E1C1G4              	56.02%
Bootstrap support for H2XN37 as seed ortholog is 100%.
Bootstrap support for F1P330 as seed ortholog is 100%.

Group of orthologs #4553. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

F6RLI7              	100.00%		E1BZT3              	100.00%
Bootstrap support for F6RLI7 as seed ortholog is 100%.
Bootstrap support for E1BZT3 as seed ortholog is 100%.

Group of orthologs #4554. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

F6TDV1              	100.00%		E1C0L6              	100.00%
Bootstrap support for F6TDV1 as seed ortholog is 100%.
Bootstrap support for E1C0L6 as seed ortholog is 100%.

Group of orthologs #4555. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

F6W5B3              	100.00%		E1C5M4              	100.00%
Bootstrap support for F6W5B3 as seed ortholog is 100%.
Bootstrap support for E1C5M4 as seed ortholog is 100%.

Group of orthologs #4556. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

F6XFL4              	100.00%		F1NBS1              	100.00%
Bootstrap support for F6XFL4 as seed ortholog is 100%.
Bootstrap support for F1NBS1 as seed ortholog is 100%.

Group of orthologs #4557. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 G.gallus:108

F6Q7R7              	100.00%		F1P467              	100.00%
Bootstrap support for F6Q7R7 as seed ortholog is 96%.
Bootstrap support for F1P467 as seed ortholog is 100%.

Group of orthologs #4558. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

H2XWV9              	100.00%		E1BWM2              	100.00%
Bootstrap support for H2XWV9 as seed ortholog is 100%.
Bootstrap support for E1BWM2 as seed ortholog is 100%.

Group of orthologs #4559. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

F7A7B2              	100.00%		F1NHJ4              	100.00%
Bootstrap support for F7A7B2 as seed ortholog is 100%.
Bootstrap support for F1NHJ4 as seed ortholog is 100%.

Group of orthologs #4560. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

H2XP59              	100.00%		F1NJT8              	100.00%
Bootstrap support for H2XP59 as seed ortholog is 100%.
Bootstrap support for F1NJT8 as seed ortholog is 100%.

Group of orthologs #4561. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

F6YN50              	100.00%		Q90Z72              	100.00%
Bootstrap support for F6YN50 as seed ortholog is 100%.
Bootstrap support for Q90Z72 as seed ortholog is 100%.

Group of orthologs #4562. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 G.gallus:108

H2XWZ2              	100.00%		F1NR77              	100.00%
Bootstrap support for H2XWZ2 as seed ortholog is 54%.
Alternative seed ortholog is F6ZFW7 (14 bits away from this cluster)
Bootstrap support for F1NR77 as seed ortholog is 100%.

Group of orthologs #4563. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

F6ZB59              	100.00%		Q91012              	100.00%
Bootstrap support for F6ZB59 as seed ortholog is 100%.
Bootstrap support for Q91012 as seed ortholog is 100%.

Group of orthologs #4564. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

H2XTS0              	100.00%		F1NZQ0              	100.00%
Bootstrap support for H2XTS0 as seed ortholog is 100%.
Bootstrap support for F1NZQ0 as seed ortholog is 100%.

Group of orthologs #4565. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

H2XXY6              	100.00%		F1NY67              	100.00%
Bootstrap support for H2XXY6 as seed ortholog is 100%.
Bootstrap support for F1NY67 as seed ortholog is 100%.

Group of orthologs #4566. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

H2XTY0              	100.00%		F1P4G7              	100.00%
Bootstrap support for H2XTY0 as seed ortholog is 100%.
Bootstrap support for F1P4G7 as seed ortholog is 100%.

Group of orthologs #4567. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

H2XXY8              	100.00%		Q5ZLH0              	100.00%
Bootstrap support for H2XXY8 as seed ortholog is 100%.
Bootstrap support for Q5ZLH0 as seed ortholog is 100%.

Group of orthologs #4568. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 G.gallus:108

H2Y3U2              	100.00%		Q5ZJI6              	100.00%
Bootstrap support for H2Y3U2 as seed ortholog is 100%.
Bootstrap support for Q5ZJI6 as seed ortholog is 100%.

Group of orthologs #4569. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 G.gallus:107

H2XVM5              	100.00%		Q9PRL8              	100.00%
                    	       		F1NFU9              	5.71%
Bootstrap support for H2XVM5 as seed ortholog is 100%.
Bootstrap support for Q9PRL8 as seed ortholog is 100%.

Group of orthologs #4570. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 G.gallus:107

F6Z315              	100.00%		E1BUC2              	100.00%
Bootstrap support for F6Z315 as seed ortholog is 100%.
Bootstrap support for E1BUC2 as seed ortholog is 100%.

Group of orthologs #4571. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 G.gallus:107

F6T4M6              	100.00%		F1NEL4              	100.00%
Bootstrap support for F6T4M6 as seed ortholog is 100%.
Bootstrap support for F1NEL4 as seed ortholog is 100%.

Group of orthologs #4572. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 G.gallus:107

F6ZLV3              	100.00%		E1BZJ0              	100.00%
Bootstrap support for F6ZLV3 as seed ortholog is 100%.
Bootstrap support for E1BZJ0 as seed ortholog is 100%.

Group of orthologs #4573. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 G.gallus:39

H2XKN7              	100.00%		E1C115              	100.00%
Bootstrap support for H2XKN7 as seed ortholog is 100%.
Bootstrap support for E1C115 as seed ortholog is 96%.

Group of orthologs #4574. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 G.gallus:107

F6Z509              	100.00%		F1NZ41              	100.00%
Bootstrap support for F6Z509 as seed ortholog is 100%.
Bootstrap support for F1NZ41 as seed ortholog is 100%.

Group of orthologs #4575. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 G.gallus:107

H2XS18              	100.00%		F1NQ55              	100.00%
Bootstrap support for H2XS18 as seed ortholog is 100%.
Bootstrap support for F1NQ55 as seed ortholog is 100%.

Group of orthologs #4576. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 G.gallus:106

F6WE99              	100.00%		Q9DED6              	100.00%
                    	       		E1C6I7              	75.77%
                    	       		Q9W6D8              	56.12%
                    	       		Q9W694              	17.35%
Bootstrap support for F6WE99 as seed ortholog is 100%.
Bootstrap support for Q9DED6 as seed ortholog is 100%.

Group of orthologs #4577. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 G.gallus:37

Q19AW1              	100.00%		Q9PVY0              	100.00%
                    	       		Q9PVX0              	48.12%
                    	       		O93582              	5.91%
Bootstrap support for Q19AW1 as seed ortholog is 94%.
Bootstrap support for Q9PVY0 as seed ortholog is 96%.

Group of orthologs #4578. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 G.gallus:106

H2XKE1              	100.00%		E1C5V3              	100.00%
Bootstrap support for H2XKE1 as seed ortholog is 100%.
Bootstrap support for E1C5V3 as seed ortholog is 100%.

Group of orthologs #4579. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 G.gallus:106

H2XQM9              	100.00%		E1C216              	100.00%
Bootstrap support for H2XQM9 as seed ortholog is 100%.
Bootstrap support for E1C216 as seed ortholog is 100%.

Group of orthologs #4580. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 G.gallus:106

H2XKV9              	100.00%		F1N9Q6              	100.00%
Bootstrap support for H2XKV9 as seed ortholog is 100%.
Bootstrap support for F1N9Q6 as seed ortholog is 100%.

Group of orthologs #4581. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 G.gallus:106

F6X8V6              	100.00%		F1P0J1              	100.00%
Bootstrap support for F6X8V6 as seed ortholog is 100%.
Bootstrap support for F1P0J1 as seed ortholog is 100%.

Group of orthologs #4582. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 G.gallus:106

H2XQM2              	100.00%		F1NGE9              	100.00%
Bootstrap support for H2XQM2 as seed ortholog is 100%.
Bootstrap support for F1NGE9 as seed ortholog is 100%.

Group of orthologs #4583. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 G.gallus:106

H2XRL3              	100.00%		F1NJF6              	100.00%
Bootstrap support for H2XRL3 as seed ortholog is 100%.
Bootstrap support for F1NJF6 as seed ortholog is 100%.

Group of orthologs #4584. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 G.gallus:106

H2XJJ6              	100.00%		F1NWX7              	100.00%
Bootstrap support for H2XJJ6 as seed ortholog is 100%.
Bootstrap support for F1NWX7 as seed ortholog is 100%.

Group of orthologs #4585. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 G.gallus:106

H2XMS0              	100.00%		F1P377              	100.00%
Bootstrap support for H2XMS0 as seed ortholog is 100%.
Bootstrap support for F1P377 as seed ortholog is 100%.

Group of orthologs #4586. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 G.gallus:106

H2Y253              	100.00%		F1NL80              	100.00%
Bootstrap support for H2Y253 as seed ortholog is 100%.
Bootstrap support for F1NL80 as seed ortholog is 100%.

Group of orthologs #4587. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 G.gallus:36

F6TXK6              	100.00%		F1NWR8              	100.00%
F6QL93              	100.00%		O57337              	100.00%
Bootstrap support for F6TXK6 as seed ortholog is 100%.
Bootstrap support for F6QL93 as seed ortholog is 100%.
Bootstrap support for F1NWR8 as seed ortholog is 87%.
Bootstrap support for O57337 as seed ortholog is 99%.

Group of orthologs #4588. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 G.gallus:105

F7A6I3              	100.00%		Q90722              	100.00%
                    	       		Q9I950              	34.93%
Bootstrap support for F7A6I3 as seed ortholog is 95%.
Bootstrap support for Q90722 as seed ortholog is 100%.

Group of orthologs #4589. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 G.gallus:105

F6RME1              	100.00%		E1BW93              	100.00%
Bootstrap support for F6RME1 as seed ortholog is 100%.
Bootstrap support for E1BW93 as seed ortholog is 100%.

Group of orthologs #4590. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 G.gallus:105

F6YWD0              	100.00%		F1NDS5              	100.00%
Bootstrap support for F6YWD0 as seed ortholog is 100%.
Bootstrap support for F1NDS5 as seed ortholog is 100%.

Group of orthologs #4591. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 G.gallus:105

H2XZH5              	100.00%		E1BS88              	100.00%
Bootstrap support for H2XZH5 as seed ortholog is 100%.
Bootstrap support for E1BS88 as seed ortholog is 100%.

Group of orthologs #4592. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 G.gallus:105

H2XNP0              	100.00%		F1NAB0              	100.00%
Bootstrap support for H2XNP0 as seed ortholog is 100%.
Bootstrap support for F1NAB0 as seed ortholog is 100%.

Group of orthologs #4593. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 G.gallus:60

F7AXC6              	100.00%		Q5ZKU8              	100.00%
Bootstrap support for F7AXC6 as seed ortholog is 93%.
Bootstrap support for Q5ZKU8 as seed ortholog is 97%.

Group of orthologs #4594. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 G.gallus:105

Q4H2N1              	100.00%		H9KYT3              	100.00%
Bootstrap support for Q4H2N1 as seed ortholog is 100%.
Bootstrap support for H9KYT3 as seed ortholog is 100%.

Group of orthologs #4595. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 G.gallus:104

F6Q678              	100.00%		E1BVS9              	100.00%
Bootstrap support for F6Q678 as seed ortholog is 100%.
Bootstrap support for E1BVS9 as seed ortholog is 100%.

Group of orthologs #4596. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 G.gallus:104

F6PIT9              	100.00%		E1C7A7              	100.00%
Bootstrap support for F6PIT9 as seed ortholog is 100%.
Bootstrap support for E1C7A7 as seed ortholog is 100%.

Group of orthologs #4597. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 G.gallus:104

F6QMJ9              	100.00%		F1NNN4              	100.00%
Bootstrap support for F6QMJ9 as seed ortholog is 100%.
Bootstrap support for F1NNN4 as seed ortholog is 100%.

Group of orthologs #4598. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 G.gallus:104

H2XVR3              	100.00%		E1BWU0              	100.00%
Bootstrap support for H2XVR3 as seed ortholog is 100%.
Bootstrap support for E1BWU0 as seed ortholog is 100%.

Group of orthologs #4599. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 G.gallus:104

F6ZWQ3              	100.00%		F1NV56              	100.00%
Bootstrap support for F6ZWQ3 as seed ortholog is 100%.
Bootstrap support for F1NV56 as seed ortholog is 100%.

Group of orthologs #4600. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 G.gallus:103

H2Y318              	100.00%		F1NDS1              	100.00%
                    	       		Q9I8F4              	24.08%
                    	       		Q5ZI93              	13.03%
Bootstrap support for H2Y318 as seed ortholog is 100%.
Bootstrap support for F1NDS1 as seed ortholog is 100%.

Group of orthologs #4601. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 G.gallus:31

F6RRN2              	100.00%		F1NJ52              	100.00%
                    	       		P48804              	5.99%
Bootstrap support for F6RRN2 as seed ortholog is 86%.
Bootstrap support for F1NJ52 as seed ortholog is 92%.

Group of orthologs #4602. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 G.gallus:103

H2Y3B8              	100.00%		F1NK13              	100.00%
                    	       		F1NW13              	48.66%
Bootstrap support for H2Y3B8 as seed ortholog is 100%.
Bootstrap support for F1NK13 as seed ortholog is 100%.

Group of orthologs #4603. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 G.gallus:103

F6YL99              	100.00%		E1BTI3              	100.00%
Bootstrap support for F6YL99 as seed ortholog is 100%.
Bootstrap support for E1BTI3 as seed ortholog is 100%.

Group of orthologs #4604. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 G.gallus:103

F6W310              	100.00%		E1C907              	100.00%
Bootstrap support for F6W310 as seed ortholog is 100%.
Bootstrap support for E1C907 as seed ortholog is 100%.

Group of orthologs #4605. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 G.gallus:103

F7B0J2              	100.00%		E1BWB1              	100.00%
Bootstrap support for F7B0J2 as seed ortholog is 100%.
Bootstrap support for E1BWB1 as seed ortholog is 100%.

Group of orthologs #4606. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 G.gallus:103

F6V2C0              	100.00%		F1NJS0              	100.00%
Bootstrap support for F6V2C0 as seed ortholog is 100%.
Bootstrap support for F1NJS0 as seed ortholog is 100%.

Group of orthologs #4607. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 G.gallus:103

H2XLG7              	100.00%		Q5ZJU5              	100.00%
Bootstrap support for H2XLG7 as seed ortholog is 100%.
Bootstrap support for Q5ZJU5 as seed ortholog is 100%.

Group of orthologs #4608. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 G.gallus:103

H2XWM9              	100.00%		F1P4W4              	100.00%
Bootstrap support for H2XWM9 as seed ortholog is 100%.
Bootstrap support for F1P4W4 as seed ortholog is 100%.

Group of orthologs #4609. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 G.gallus:102

F6UCI3              	100.00%		E1BYS3              	100.00%
                    	       		H9L033              	12.04%
                    	       		E1C2Q6              	7.88%
Bootstrap support for F6UCI3 as seed ortholog is 100%.
Bootstrap support for E1BYS3 as seed ortholog is 100%.

Group of orthologs #4610. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 G.gallus:102

F6YIH8              	100.00%		F1NCU4              	100.00%
                    	       		F1NPH5              	11.49%
Bootstrap support for F6YIH8 as seed ortholog is 100%.
Bootstrap support for F1NCU4 as seed ortholog is 100%.

Group of orthologs #4611. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 G.gallus:102

F7BP46              	100.00%		F1NKS2              	100.00%
                    	       		E1C0E5              	23.84%
Bootstrap support for F7BP46 as seed ortholog is 100%.
Bootstrap support for F1NKS2 as seed ortholog is 100%.

Group of orthologs #4612. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 G.gallus:24

F7BFW8              	100.00%		P80226              	100.00%
                    	       		F1NUJ7              	5.37%
Bootstrap support for F7BFW8 as seed ortholog is 97%.
Bootstrap support for P80226 as seed ortholog is 90%.

Group of orthologs #4613. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 G.gallus:102

F6R2Z8              	100.00%		F1ND60              	100.00%
Bootstrap support for F6R2Z8 as seed ortholog is 100%.
Bootstrap support for F1ND60 as seed ortholog is 100%.

Group of orthologs #4614. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 G.gallus:102

F7ARA7              	100.00%		E1BU64              	100.00%
Bootstrap support for F7ARA7 as seed ortholog is 72%.
Alternative seed ortholog is F6RH63 (13 bits away from this cluster)
Bootstrap support for E1BU64 as seed ortholog is 100%.

Group of orthologs #4615. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 G.gallus:102

F7AXH3              	100.00%		E1C305              	100.00%
Bootstrap support for F7AXH3 as seed ortholog is 100%.
Bootstrap support for E1C305 as seed ortholog is 100%.

Group of orthologs #4616. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 G.gallus:102

F6U0K9              	100.00%		F1NVG3              	100.00%
Bootstrap support for F6U0K9 as seed ortholog is 100%.
Bootstrap support for F1NVG3 as seed ortholog is 100%.

Group of orthologs #4617. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 G.gallus:102

H2XP49              	100.00%		F1NJ34              	100.00%
Bootstrap support for H2XP49 as seed ortholog is 100%.
Bootstrap support for F1NJ34 as seed ortholog is 100%.

Group of orthologs #4618. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 G.gallus:102

F6YC04              	100.00%		F1P5Y7              	100.00%
Bootstrap support for F6YC04 as seed ortholog is 100%.
Bootstrap support for F1P5Y7 as seed ortholog is 100%.

Group of orthologs #4619. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 G.gallus:102

H2XRD0              	100.00%		F1NGN1              	100.00%
Bootstrap support for H2XRD0 as seed ortholog is 100%.
Bootstrap support for F1NGN1 as seed ortholog is 100%.

Group of orthologs #4620. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 G.gallus:102

F6XR53              	100.00%		P43347              	100.00%
Bootstrap support for F6XR53 as seed ortholog is 100%.
Bootstrap support for P43347 as seed ortholog is 100%.

Group of orthologs #4621. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 G.gallus:101

F6YAZ4              	100.00%		P0C1H3              	100.00%
                    	       		P0C1H4              	100.00%
                    	       		Q9PSW9              	100.00%
                    	       		P0C1H5              	96.58%
                    	       		H9L2L0              	95.21%
                    	       		F1NF30              	50.68%
Bootstrap support for F6YAZ4 as seed ortholog is 100%.
Bootstrap support for P0C1H3 as seed ortholog is 100%.
Bootstrap support for P0C1H4 as seed ortholog is 100%.
Bootstrap support for Q9PSW9 as seed ortholog is 100%.

Group of orthologs #4622. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 G.gallus:101

H2XVD4              	100.00%		E1C7Y2              	100.00%
                    	       		Q8QGW7              	100.00%
Bootstrap support for H2XVD4 as seed ortholog is 100%.
Bootstrap support for E1C7Y2 as seed ortholog is 100%.
Bootstrap support for Q8QGW7 as seed ortholog is 100%.

Group of orthologs #4623. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 G.gallus:101

F6XI02              	100.00%		E1BUR5              	100.00%
Bootstrap support for F6XI02 as seed ortholog is 100%.
Bootstrap support for E1BUR5 as seed ortholog is 100%.

Group of orthologs #4624. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 G.gallus:101

F6U5V8              	100.00%		Q5ZJR9              	100.00%
Bootstrap support for F6U5V8 as seed ortholog is 100%.
Bootstrap support for Q5ZJR9 as seed ortholog is 100%.

Group of orthologs #4625. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 G.gallus:101

H2XUY8              	100.00%		F1NEU0              	100.00%
Bootstrap support for H2XUY8 as seed ortholog is 97%.
Bootstrap support for F1NEU0 as seed ortholog is 100%.

Group of orthologs #4626. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 G.gallus:101

H2Y0I2              	100.00%		F1N9S9              	100.00%
Bootstrap support for H2Y0I2 as seed ortholog is 100%.
Bootstrap support for F1N9S9 as seed ortholog is 100%.

Group of orthologs #4627. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 G.gallus:38

Q4H303              	100.00%		F1NEA7              	100.00%
Bootstrap support for Q4H303 as seed ortholog is 100%.
Bootstrap support for F1NEA7 as seed ortholog is 99%.

Group of orthologs #4628. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 G.gallus:101

H2XYU9              	100.00%		Q98SH2              	100.00%
Bootstrap support for H2XYU9 as seed ortholog is 100%.
Bootstrap support for Q98SH2 as seed ortholog is 100%.

Group of orthologs #4629. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 G.gallus:100

F6XB23              	100.00%		F1NKG3              	100.00%
F6PNN6              	52.70%		
F6ZAZ4              	48.11%		
F6SYC7              	20.27%		
F6TBP5              	13.51%		
Bootstrap support for F6XB23 as seed ortholog is 81%.
Bootstrap support for F1NKG3 as seed ortholog is 100%.

Group of orthologs #4630. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 G.gallus:100

H2XML9              	100.00%		E1BQQ3              	100.00%
                    	       		H9KZ49              	39.92%
Bootstrap support for H2XML9 as seed ortholog is 100%.
Bootstrap support for E1BQQ3 as seed ortholog is 100%.

Group of orthologs #4631. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 G.gallus:100

F6ZZS3              	100.00%		E1C6N6              	100.00%
                    	       		E1BZZ1              	61.81%
Bootstrap support for F6ZZS3 as seed ortholog is 100%.
Bootstrap support for E1C6N6 as seed ortholog is 100%.

Group of orthologs #4632. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 G.gallus:100

F7B7V5              	100.00%		F1NU46              	100.00%
                    	       		E1C1S4              	11.30%
Bootstrap support for F7B7V5 as seed ortholog is 100%.
Bootstrap support for F1NU46 as seed ortholog is 100%.

Group of orthologs #4633. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 G.gallus:40

F7AWZ4              	100.00%		Q5ZI22              	100.00%
                    	       		F1NE91              	53.81%
Bootstrap support for F7AWZ4 as seed ortholog is 100%.
Bootstrap support for Q5ZI22 as seed ortholog is 80%.

Group of orthologs #4634. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 G.gallus:100

F6SP61              	100.00%		E1BQT8              	100.00%
Bootstrap support for F6SP61 as seed ortholog is 100%.
Bootstrap support for E1BQT8 as seed ortholog is 100%.

Group of orthologs #4635. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 G.gallus:100

F7BI48              	100.00%		E1C189              	100.00%
Bootstrap support for F7BI48 as seed ortholog is 100%.
Bootstrap support for E1C189 as seed ortholog is 100%.

Group of orthologs #4636. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 G.gallus:100

F6Q6C9              	100.00%		H9KYP0              	100.00%
Bootstrap support for F6Q6C9 as seed ortholog is 100%.
Bootstrap support for H9KYP0 as seed ortholog is 100%.

Group of orthologs #4637. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 G.gallus:100

F6U6Y7              	100.00%		F1NVG0              	100.00%
Bootstrap support for F6U6Y7 as seed ortholog is 64%.
Alternative seed ortholog is H2XJT9 (15 bits away from this cluster)
Bootstrap support for F1NVG0 as seed ortholog is 100%.

Group of orthologs #4638. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 G.gallus:26

F6U2P7              	100.00%		P23682              	100.00%
Bootstrap support for F6U2P7 as seed ortholog is 64%.
Alternative seed ortholog is F6ZW63 (8 bits away from this cluster)
Bootstrap support for P23682 as seed ortholog is 96%.

Group of orthologs #4639. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 G.gallus:100

H2XWX4              	100.00%		Q5ZI52              	100.00%
Bootstrap support for H2XWX4 as seed ortholog is 100%.
Bootstrap support for Q5ZI52 as seed ortholog is 100%.

Group of orthologs #4640. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 G.gallus:19

F7ARA1              	100.00%		E1C4V4              	100.00%
F6XEC9              	17.81%		H9L383              	48.23%
                    	       		E1C5A5              	28.72%
                    	       		Q7SZC6              	28.01%
                    	       		E1C5A6              	18.09%
Bootstrap support for F7ARA1 as seed ortholog is 73%.
Alternative seed ortholog is F6RH63 (14 bits away from this cluster)
Bootstrap support for E1C4V4 as seed ortholog is 85%.

Group of orthologs #4641. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 G.gallus:99

F6ZSI1              	100.00%		E1C568              	100.00%
Bootstrap support for F6ZSI1 as seed ortholog is 100%.
Bootstrap support for E1C568 as seed ortholog is 100%.

Group of orthologs #4642. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 G.gallus:99

F6UE09              	100.00%		F1NYJ7              	100.00%
Bootstrap support for F6UE09 as seed ortholog is 100%.
Bootstrap support for F1NYJ7 as seed ortholog is 100%.

Group of orthologs #4643. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 G.gallus:99

F7ATT5              	100.00%		F1NHK0              	100.00%
Bootstrap support for F7ATT5 as seed ortholog is 100%.
Bootstrap support for F1NHK0 as seed ortholog is 100%.

Group of orthologs #4644. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 G.gallus:99

H2Y2N4              	100.00%		E1BZA7              	100.00%
Bootstrap support for H2Y2N4 as seed ortholog is 100%.
Bootstrap support for E1BZA7 as seed ortholog is 100%.

Group of orthologs #4645. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 G.gallus:6

F7A8B4              	100.00%		F1NVH8              	100.00%
Bootstrap support for F7A8B4 as seed ortholog is 100%.
Bootstrap support for F1NVH8 as seed ortholog is 47%.
Alternative seed ortholog is F1NU52 (6 bits away from this cluster)

Group of orthologs #4646. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 G.gallus:99

H2XZ96              	100.00%		F1NKJ4              	100.00%
Bootstrap support for H2XZ96 as seed ortholog is 100%.
Bootstrap support for F1NKJ4 as seed ortholog is 100%.

Group of orthologs #4647. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 G.gallus:99

H2XTI2              	100.00%		Q5ZMM0              	100.00%
Bootstrap support for H2XTI2 as seed ortholog is 100%.
Bootstrap support for Q5ZMM0 as seed ortholog is 100%.

Group of orthologs #4648. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 G.gallus:98

F6PH84              	100.00%		E1BTG7              	100.00%
Bootstrap support for F6PH84 as seed ortholog is 100%.
Bootstrap support for E1BTG7 as seed ortholog is 100%.

Group of orthologs #4649. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 G.gallus:98

F7A967              	100.00%		E1BUA3              	100.00%
Bootstrap support for F7A967 as seed ortholog is 100%.
Bootstrap support for E1BUA3 as seed ortholog is 100%.

Group of orthologs #4650. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 G.gallus:98

H2XWK0              	100.00%		E1C8Z5              	100.00%
Bootstrap support for H2XWK0 as seed ortholog is 100%.
Bootstrap support for E1C8Z5 as seed ortholog is 100%.

Group of orthologs #4651. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 G.gallus:98

H2XTC8              	100.00%		F1NGH7              	100.00%
Bootstrap support for H2XTC8 as seed ortholog is 100%.
Bootstrap support for F1NGH7 as seed ortholog is 100%.

Group of orthologs #4652. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 G.gallus:98

F7ADK7              	100.00%		Q5ZMW4              	100.00%
Bootstrap support for F7ADK7 as seed ortholog is 100%.
Bootstrap support for Q5ZMW4 as seed ortholog is 100%.

Group of orthologs #4653. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 G.gallus:34

H2XWL2              	100.00%		F1NYX2              	100.00%
Bootstrap support for H2XWL2 as seed ortholog is 100%.
Bootstrap support for F1NYX2 as seed ortholog is 98%.

Group of orthologs #4654. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 G.gallus:10

F6VEV6              	100.00%		P17277              	100.00%
                    	       		F1NMG4              	95.64%
                    	       		Q6B3N0              	10.63%
Bootstrap support for F6VEV6 as seed ortholog is 100%.
Bootstrap support for P17277 as seed ortholog is 98%.

Group of orthologs #4655. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 G.gallus:97

F6UMD2              	100.00%		E1BYV0              	100.00%
F6TZQ9              	98.35%		
Bootstrap support for F6UMD2 as seed ortholog is 100%.
Bootstrap support for E1BYV0 as seed ortholog is 100%.

Group of orthologs #4656. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 G.gallus:45

F7AG40              	100.00%		Q5ZI01              	100.00%
                    	       		F1NC91              	51.89%
Bootstrap support for F7AG40 as seed ortholog is 100%.
Bootstrap support for Q5ZI01 as seed ortholog is 95%.

Group of orthologs #4657. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 G.gallus:97

F6U6F4              	100.00%		F1NBR6              	100.00%
Bootstrap support for F6U6F4 as seed ortholog is 100%.
Bootstrap support for F1NBR6 as seed ortholog is 100%.

Group of orthologs #4658. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 G.gallus:97

F6UXQ4              	100.00%		F1NL97              	100.00%
Bootstrap support for F6UXQ4 as seed ortholog is 100%.
Bootstrap support for F1NL97 as seed ortholog is 100%.

Group of orthologs #4659. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 G.gallus:97

Q1RL31              	100.00%		E1BUQ7              	100.00%
Bootstrap support for Q1RL31 as seed ortholog is 100%.
Bootstrap support for E1BUQ7 as seed ortholog is 100%.

Group of orthologs #4660. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 G.gallus:97

H2XJW7              	100.00%		F1NSQ7              	100.00%
Bootstrap support for H2XJW7 as seed ortholog is 100%.
Bootstrap support for F1NSQ7 as seed ortholog is 100%.

Group of orthologs #4661. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 G.gallus:97

F6WZ37              	100.00%		Q98TF5              	100.00%
Bootstrap support for F6WZ37 as seed ortholog is 100%.
Bootstrap support for Q98TF5 as seed ortholog is 100%.

Group of orthologs #4662. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 G.gallus:97

F6ZR87              	100.00%		Q1T7C0              	100.00%
Bootstrap support for F6ZR87 as seed ortholog is 100%.
Bootstrap support for Q1T7C0 as seed ortholog is 100%.

Group of orthologs #4663. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 G.gallus:97

F6Z833              	100.00%		Q5ZL84              	100.00%
Bootstrap support for F6Z833 as seed ortholog is 100%.
Bootstrap support for Q5ZL84 as seed ortholog is 100%.

Group of orthologs #4664. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 G.gallus:32

H2XT36              	100.00%		F1P5T3              	100.00%
Bootstrap support for H2XT36 as seed ortholog is 89%.
Bootstrap support for F1P5T3 as seed ortholog is 97%.

Group of orthologs #4665. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 G.gallus:96

F6QBF6              	100.00%		E1BX32              	100.00%
Bootstrap support for F6QBF6 as seed ortholog is 100%.
Bootstrap support for E1BX32 as seed ortholog is 100%.

Group of orthologs #4666. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 G.gallus:96

F6VY51              	100.00%		E1BQ92              	100.00%
Bootstrap support for F6VY51 as seed ortholog is 100%.
Bootstrap support for E1BQ92 as seed ortholog is 100%.

Group of orthologs #4667. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 G.gallus:96

H2XKD8              	100.00%		E1BSB6              	100.00%
Bootstrap support for H2XKD8 as seed ortholog is 100%.
Bootstrap support for E1BSB6 as seed ortholog is 100%.

Group of orthologs #4668. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 G.gallus:96

H2XU80              	100.00%		E1BSS5              	100.00%
Bootstrap support for H2XU80 as seed ortholog is 90%.
Bootstrap support for E1BSS5 as seed ortholog is 100%.

Group of orthologs #4669. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 G.gallus:96

F6W5F4              	100.00%		H9L324              	100.00%
Bootstrap support for F6W5F4 as seed ortholog is 100%.
Bootstrap support for H9L324 as seed ortholog is 100%.

Group of orthologs #4670. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 G.gallus:96

F6YTC9              	100.00%		F1P4I5              	100.00%
Bootstrap support for F6YTC9 as seed ortholog is 100%.
Bootstrap support for F1P4I5 as seed ortholog is 100%.

Group of orthologs #4671. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 G.gallus:96

H2Y008              	100.00%		E1C6U9              	100.00%
Bootstrap support for H2Y008 as seed ortholog is 100%.
Bootstrap support for E1C6U9 as seed ortholog is 100%.

Group of orthologs #4672. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 G.gallus:96

F6WQK5              	100.00%		Q98944              	100.00%
Bootstrap support for F6WQK5 as seed ortholog is 100%.
Bootstrap support for Q98944 as seed ortholog is 100%.

Group of orthologs #4673. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:95

H2XSG2              	100.00%		F1NMX7              	100.00%
                    	       		F1NZB8              	63.55%
                    	       		H9L1B1              	53.18%
Bootstrap support for H2XSG2 as seed ortholog is 100%.
Bootstrap support for F1NMX7 as seed ortholog is 100%.

Group of orthologs #4674. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:95

H2Y331              	100.00%		H9L035              	100.00%
F6QZV1              	84.98%		
Bootstrap support for H2Y331 as seed ortholog is 100%.
Bootstrap support for H9L035 as seed ortholog is 100%.

Group of orthologs #4675. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:95

F6Q6F0              	100.00%		E1BZG4              	100.00%
Bootstrap support for F6Q6F0 as seed ortholog is 100%.
Bootstrap support for E1BZG4 as seed ortholog is 100%.

Group of orthologs #4676. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:95

F6SD13              	100.00%		E1C3G8              	100.00%
Bootstrap support for F6SD13 as seed ortholog is 100%.
Bootstrap support for E1C3G8 as seed ortholog is 100%.

Group of orthologs #4677. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:95

F6XY64              	100.00%		E1C0S1              	100.00%
Bootstrap support for F6XY64 as seed ortholog is 100%.
Bootstrap support for E1C0S1 as seed ortholog is 100%.

Group of orthologs #4678. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 G.gallus:95

F6URD6              	100.00%		F1N9G4              	100.00%
Bootstrap support for F6URD6 as seed ortholog is 56%.
Alternative seed ortholog is F6ZRG6 (5 bits away from this cluster)
Bootstrap support for F1N9G4 as seed ortholog is 100%.

Group of orthologs #4679. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:95

F6R6V8              	100.00%		F1NM98              	100.00%
Bootstrap support for F6R6V8 as seed ortholog is 100%.
Bootstrap support for F1NM98 as seed ortholog is 100%.

Group of orthologs #4680. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:95

F6ZHL3              	100.00%		E1C7D6              	100.00%
Bootstrap support for F6ZHL3 as seed ortholog is 100%.
Bootstrap support for E1C7D6 as seed ortholog is 100%.

Group of orthologs #4681. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:95

F6V377              	100.00%		F1NKW4              	100.00%
Bootstrap support for F6V377 as seed ortholog is 100%.
Bootstrap support for F1NKW4 as seed ortholog is 100%.

Group of orthologs #4682. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 G.gallus:18

H2XV92              	100.00%		F1NPH3              	100.00%
Bootstrap support for H2XV92 as seed ortholog is 87%.
Bootstrap support for F1NPH3 as seed ortholog is 74%.
Alternative seed ortholog is Q90615 (18 bits away from this cluster)

Group of orthologs #4683. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 G.gallus:95

H2Y135              	100.00%		F1NYT8              	100.00%
Bootstrap support for H2Y135 as seed ortholog is 100%.
Bootstrap support for F1NYT8 as seed ortholog is 100%.

Group of orthologs #4684. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 G.gallus:94

F7B983              	100.00%		E1C812              	100.00%
                    	       		E1BVU3              	34.58%
Bootstrap support for F7B983 as seed ortholog is 100%.
Bootstrap support for E1C812 as seed ortholog is 100%.

Group of orthologs #4685. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 G.gallus:94

F6ZCR7              	100.00%		H9L0W9              	100.00%
                    	       		F1NGC6              	15.50%
Bootstrap support for F6ZCR7 as seed ortholog is 100%.
Bootstrap support for H9L0W9 as seed ortholog is 100%.

Group of orthologs #4686. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 G.gallus:94

F6VWZ6              	100.00%		E1BUC4              	100.00%
Bootstrap support for F6VWZ6 as seed ortholog is 100%.
Bootstrap support for E1BUC4 as seed ortholog is 100%.

Group of orthologs #4687. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 G.gallus:94

H2XJU4              	100.00%		E1BVW3              	100.00%
Bootstrap support for H2XJU4 as seed ortholog is 100%.
Bootstrap support for E1BVW3 as seed ortholog is 100%.

Group of orthologs #4688. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 G.gallus:94

F6QXL1              	100.00%		F1P2Y9              	100.00%
Bootstrap support for F6QXL1 as seed ortholog is 100%.
Bootstrap support for F1P2Y9 as seed ortholog is 100%.

Group of orthologs #4689. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 G.gallus:3

F6WKP3              	100.00%		E1C010              	100.00%
                    	       		F1NB24              	14.54%
Bootstrap support for F6WKP3 as seed ortholog is 100%.
Bootstrap support for E1C010 as seed ortholog is 59%.
Alternative seed ortholog is E1C1W4 (3 bits away from this cluster)

Group of orthologs #4690. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 G.gallus:12

H2XME7              	100.00%		F1NJQ2              	100.00%
                    	       		F1NX85              	17.50%
Bootstrap support for H2XME7 as seed ortholog is 75%.
Bootstrap support for F1NJQ2 as seed ortholog is 56%.
Alternative seed ortholog is F1NVW6 (12 bits away from this cluster)

Group of orthologs #4691. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 G.gallus:93

F6TIK7              	100.00%		E1C6A2              	100.00%
Bootstrap support for F6TIK7 as seed ortholog is 100%.
Bootstrap support for E1C6A2 as seed ortholog is 100%.

Group of orthologs #4692. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 G.gallus:1

F6Q249              	100.00%		F1P263              	100.00%
Bootstrap support for F6Q249 as seed ortholog is 100%.
Bootstrap support for F1P263 as seed ortholog is 59%.
Alternative seed ortholog is E1BSE3 (1 bits away from this cluster)

Group of orthologs #4693. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 G.gallus:93

F6WEI4              	100.00%		F1P0X0              	100.00%
Bootstrap support for F6WEI4 as seed ortholog is 100%.
Bootstrap support for F1P0X0 as seed ortholog is 100%.

Group of orthologs #4694. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 G.gallus:92

F6QEK5              	100.00%		P49705              	100.00%
                    	       		F1NE86              	12.11%
                    	       		F1NE83              	8.07%
Bootstrap support for F6QEK5 as seed ortholog is 100%.
Bootstrap support for P49705 as seed ortholog is 100%.

Group of orthologs #4695. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 G.gallus:27

F6R9F6              	100.00%		H9L315              	100.00%
H2XPF3              	13.58%		
Bootstrap support for F6R9F6 as seed ortholog is 71%.
Alternative seed ortholog is F6VXQ6 (17 bits away from this cluster)
Bootstrap support for H9L315 as seed ortholog is 88%.

Group of orthologs #4696. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 G.gallus:92

H2XYA3              	100.00%		F1NB89              	100.00%
F6TDG4              	37.20%		
Bootstrap support for H2XYA3 as seed ortholog is 100%.
Bootstrap support for F1NB89 as seed ortholog is 100%.

Group of orthologs #4697. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 G.gallus:92

F6YYR4              	100.00%		E1BZ90              	100.00%
Bootstrap support for F6YYR4 as seed ortholog is 99%.
Bootstrap support for E1BZ90 as seed ortholog is 100%.

Group of orthologs #4698. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 G.gallus:92

H2XLS7              	100.00%		E1BR29              	100.00%
Bootstrap support for H2XLS7 as seed ortholog is 100%.
Bootstrap support for E1BR29 as seed ortholog is 100%.

Group of orthologs #4699. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 G.gallus:6

F6QLN4              	100.00%		F1NYE5              	100.00%
Bootstrap support for F6QLN4 as seed ortholog is 100%.
Bootstrap support for F1NYE5 as seed ortholog is 61%.
Alternative seed ortholog is Q9I9R0 (6 bits away from this cluster)

Group of orthologs #4700. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 G.gallus:92

F7ADC2              	100.00%		F1NJF4              	100.00%
Bootstrap support for F7ADC2 as seed ortholog is 100%.
Bootstrap support for F1NJF4 as seed ortholog is 100%.

Group of orthologs #4701. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 G.gallus:92

Q8MXX3              	100.00%		E1C6N2              	100.00%
Bootstrap support for Q8MXX3 as seed ortholog is 100%.
Bootstrap support for E1C6N2 as seed ortholog is 100%.

Group of orthologs #4702. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 G.gallus:26

F6X3H1              	100.00%		Q91967              	100.00%
Bootstrap support for F6X3H1 as seed ortholog is 80%.
Bootstrap support for Q91967 as seed ortholog is 97%.

Group of orthologs #4703. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 G.gallus:92

H2Y221              	100.00%		F1NRX0              	100.00%
Bootstrap support for H2Y221 as seed ortholog is 100%.
Bootstrap support for F1NRX0 as seed ortholog is 100%.

Group of orthologs #4704. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 G.gallus:91

F7AMU0              	100.00%		F1NG42              	100.00%
F6V014              	30.31%		
F6QY06              	14.29%		
Bootstrap support for F7AMU0 as seed ortholog is 72%.
Alternative seed ortholog is F6PTL1 (21 bits away from this cluster)
Bootstrap support for F1NG42 as seed ortholog is 100%.

Group of orthologs #4705. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 G.gallus:91

F6QMA7              	100.00%		F1NU06              	100.00%
H2XPQ4              	32.50%		
Bootstrap support for F6QMA7 as seed ortholog is 100%.
Bootstrap support for F1NU06 as seed ortholog is 100%.

Group of orthologs #4706. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 G.gallus:91

F6SSS2              	100.00%		P07031              	100.00%
                    	       		P07032              	26.50%
Bootstrap support for F6SSS2 as seed ortholog is 100%.
Bootstrap support for P07031 as seed ortholog is 100%.

Group of orthologs #4707. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 G.gallus:91

F6TC72              	100.00%		E1BYY3              	100.00%
Bootstrap support for F6TC72 as seed ortholog is 100%.
Bootstrap support for E1BYY3 as seed ortholog is 100%.

Group of orthologs #4708. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 G.gallus:91

F6PJX9              	100.00%		F1NWJ5              	100.00%
Bootstrap support for F6PJX9 as seed ortholog is 100%.
Bootstrap support for F1NWJ5 as seed ortholog is 100%.

Group of orthologs #4709. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 G.gallus:91

H2XZU9              	100.00%		E1BST1              	100.00%
Bootstrap support for H2XZU9 as seed ortholog is 100%.
Bootstrap support for E1BST1 as seed ortholog is 100%.

Group of orthologs #4710. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 G.gallus:91

F6RJZ1              	100.00%		Q90955              	100.00%
Bootstrap support for F6RJZ1 as seed ortholog is 100%.
Bootstrap support for Q90955 as seed ortholog is 100%.

Group of orthologs #4711. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 G.gallus:91

H2XYF7              	100.00%		E1C7G7              	100.00%
Bootstrap support for H2XYF7 as seed ortholog is 100%.
Bootstrap support for E1C7G7 as seed ortholog is 100%.

Group of orthologs #4712. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 G.gallus:91

H2XVV1              	100.00%		F1NHW5              	100.00%
Bootstrap support for H2XVV1 as seed ortholog is 100%.
Bootstrap support for F1NHW5 as seed ortholog is 100%.

Group of orthologs #4713. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 G.gallus:91

H2XXY9              	100.00%		Q5ZJB5              	100.00%
Bootstrap support for H2XXY9 as seed ortholog is 100%.
Bootstrap support for Q5ZJB5 as seed ortholog is 100%.

Group of orthologs #4714. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 G.gallus:90

F6Q1K9              	100.00%		Q2LK94              	100.00%
F6V750              	79.57%		Q2LK95              	41.74%
H2XYK1              	36.78%		
Bootstrap support for F6Q1K9 as seed ortholog is 100%.
Bootstrap support for Q2LK94 as seed ortholog is 100%.

Group of orthologs #4715. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 G.gallus:90

H2XTG7              	100.00%		E1BW79              	100.00%
                    	       		E1BU65              	68.42%
Bootstrap support for H2XTG7 as seed ortholog is 100%.
Bootstrap support for E1BW79 as seed ortholog is 100%.

Group of orthologs #4716. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 G.gallus:90

F6X972              	100.00%		F1NN48              	100.00%
                    	       		E1BTU8              	16.19%
Bootstrap support for F6X972 as seed ortholog is 100%.
Bootstrap support for F1NN48 as seed ortholog is 100%.

Group of orthologs #4717. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 G.gallus:90

F6ZYN8              	100.00%		Q5ZK63              	100.00%
                    	       		G1K2Z2              	69.38%
Bootstrap support for F6ZYN8 as seed ortholog is 100%.
Bootstrap support for Q5ZK63 as seed ortholog is 100%.

Group of orthologs #4718. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 G.gallus:39

F6RQR6              	100.00%		F1NAK3              	100.00%
Bootstrap support for F6RQR6 as seed ortholog is 100%.
Bootstrap support for F1NAK3 as seed ortholog is 76%.

Group of orthologs #4719. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 G.gallus:90

F6XY19              	100.00%		E1BZY3              	100.00%
Bootstrap support for F6XY19 as seed ortholog is 100%.
Bootstrap support for E1BZY3 as seed ortholog is 100%.

Group of orthologs #4720. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 G.gallus:90

F6XMY3              	100.00%		F1NVZ3              	100.00%
Bootstrap support for F6XMY3 as seed ortholog is 100%.
Bootstrap support for F1NVZ3 as seed ortholog is 100%.

Group of orthologs #4721. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 G.gallus:90

F6PKA8              	100.00%		Q9YHY9              	100.00%
Bootstrap support for F6PKA8 as seed ortholog is 100%.
Bootstrap support for Q9YHY9 as seed ortholog is 100%.

Group of orthologs #4722. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 G.gallus:90

H2XVV5              	100.00%		E1C5C5              	100.00%
Bootstrap support for H2XVV5 as seed ortholog is 100%.
Bootstrap support for E1C5C5 as seed ortholog is 100%.

Group of orthologs #4723. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 G.gallus:31

F6W8U8              	100.00%		Q7ZZZ5              	100.00%
Bootstrap support for F6W8U8 as seed ortholog is 91%.
Bootstrap support for Q7ZZZ5 as seed ortholog is 92%.

Group of orthologs #4724. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:89

F6QTX2              	100.00%		E1BSJ9              	100.00%
                    	       		Q5ZIB8              	96.01%
                    	       		F1P0U2              	5.92%
Bootstrap support for F6QTX2 as seed ortholog is 100%.
Bootstrap support for E1BSJ9 as seed ortholog is 100%.

Group of orthologs #4725. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:89

F6ZKY0              	100.00%		F1NZF3              	100.00%
                    	       		F1NZZ4              	20.47%
                    	       		E1C435              	19.45%
Bootstrap support for F6ZKY0 as seed ortholog is 100%.
Bootstrap support for F1NZF3 as seed ortholog is 100%.

Group of orthologs #4726. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:89

F6V184              	100.00%		F1NH62              	100.00%
Bootstrap support for F6V184 as seed ortholog is 100%.
Bootstrap support for F1NH62 as seed ortholog is 100%.

Group of orthologs #4727. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:89

F6X7P9              	100.00%		F1NDK6              	100.00%
Bootstrap support for F6X7P9 as seed ortholog is 100%.
Bootstrap support for F1NDK6 as seed ortholog is 100%.

Group of orthologs #4728. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:27

H2XSI1              	100.00%		E1BSB0              	100.00%
Bootstrap support for H2XSI1 as seed ortholog is 100%.
Bootstrap support for E1BSB0 as seed ortholog is 87%.

Group of orthologs #4729. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:89

H2XU26              	100.00%		E1BYY6              	100.00%
Bootstrap support for H2XU26 as seed ortholog is 100%.
Bootstrap support for E1BYY6 as seed ortholog is 100%.

Group of orthologs #4730. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:89

F6W382              	100.00%		F1NWU6              	100.00%
Bootstrap support for F6W382 as seed ortholog is 100%.
Bootstrap support for F1NWU6 as seed ortholog is 100%.

Group of orthologs #4731. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:89

F7AM14              	100.00%		F1NLS2              	100.00%
Bootstrap support for F7AM14 as seed ortholog is 100%.
Bootstrap support for F1NLS2 as seed ortholog is 100%.

Group of orthologs #4732. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 G.gallus:89

H2XZE6              	100.00%		E1C002              	100.00%
Bootstrap support for H2XZE6 as seed ortholog is 100%.
Bootstrap support for E1C002 as seed ortholog is 100%.

Group of orthologs #4733. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 G.gallus:88

F6PVL8              	100.00%		E1C9K4              	100.00%
                    	       		F1NZ96              	6.47%
                    	       		F1NZ95              	6.47%
Bootstrap support for F6PVL8 as seed ortholog is 57%.
Alternative seed ortholog is F6ZRG6 (6 bits away from this cluster)
Bootstrap support for E1C9K4 as seed ortholog is 100%.

Group of orthologs #4734. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 G.gallus:88

H2XKZ2              	100.00%		E1C912              	100.00%
H2Y0H0              	100.00%		O42412              	97.27%
Bootstrap support for H2XKZ2 as seed ortholog is 100%.
Bootstrap support for H2Y0H0 as seed ortholog is 100%.
Bootstrap support for E1C912 as seed ortholog is 100%.

Group of orthologs #4735. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 G.gallus:88

H2XR90              	100.00%		F1P1S6              	100.00%
                    	       		F1NUA2              	30.83%
Bootstrap support for H2XR90 as seed ortholog is 100%.
Bootstrap support for F1P1S6 as seed ortholog is 100%.

Group of orthologs #4736. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 G.gallus:45

H2Y3S3              	100.00%		Q02960              	100.00%
H2Y234              	18.52%		
Bootstrap support for H2Y3S3 as seed ortholog is 100%.
Bootstrap support for Q02960 as seed ortholog is 98%.

Group of orthologs #4737. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 G.gallus:88

F6RR57              	100.00%		F1NT49              	100.00%
Bootstrap support for F6RR57 as seed ortholog is 100%.
Bootstrap support for F1NT49 as seed ortholog is 100%.

Group of orthologs #4738. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 G.gallus:88

H2XLI3              	100.00%		F1NFB7              	100.00%
Bootstrap support for H2XLI3 as seed ortholog is 100%.
Bootstrap support for F1NFB7 as seed ortholog is 100%.

Group of orthologs #4739. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 G.gallus:88

H2XNI6              	100.00%		F1NYE7              	100.00%
Bootstrap support for H2XNI6 as seed ortholog is 100%.
Bootstrap support for F1NYE7 as seed ortholog is 100%.

Group of orthologs #4740. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 G.gallus:88

H2XTH7              	100.00%		H9L133              	100.00%
Bootstrap support for H2XTH7 as seed ortholog is 100%.
Bootstrap support for H9L133 as seed ortholog is 100%.

Group of orthologs #4741. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 G.gallus:87

F6T7K5              	100.00%		F1NFU4              	100.00%
F6T7L2              	13.89%		
H2Y2X3              	12.65%		
Bootstrap support for F6T7K5 as seed ortholog is 100%.
Bootstrap support for F1NFU4 as seed ortholog is 100%.

Group of orthologs #4742. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 G.gallus:87

F6Z6J9              	100.00%		F1NIB5              	100.00%
                    	       		O42146              	40.27%
                    	       		P26652              	38.23%
Bootstrap support for F6Z6J9 as seed ortholog is 91%.
Bootstrap support for F1NIB5 as seed ortholog is 100%.

Group of orthologs #4743. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 G.gallus:87

F7BNZ0              	100.00%		F1NDZ3              	100.00%
                    	       		E1C5M1              	17.00%
                    	       		Q589G5              	5.13%
Bootstrap support for F7BNZ0 as seed ortholog is 100%.
Bootstrap support for F1NDZ3 as seed ortholog is 100%.

Group of orthologs #4744. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 G.gallus:17

H2XV30              	100.00%		F1P0W6              	100.00%
F6RRQ4              	29.32%		Q5ZIE5              	10.53%
Bootstrap support for H2XV30 as seed ortholog is 100%.
Bootstrap support for F1P0W6 as seed ortholog is 72%.
Alternative seed ortholog is F1NYZ0 (17 bits away from this cluster)

Group of orthologs #4745. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 G.gallus:87

F6TIT7              	100.00%		F1N9M7              	100.00%
                    	       		F1NYD8              	20.08%
Bootstrap support for F6TIT7 as seed ortholog is 100%.
Bootstrap support for F1N9M7 as seed ortholog is 100%.

Group of orthologs #4746. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 G.gallus:23

H2XWC8              	100.00%		E1C3G2              	100.00%
H2XL19              	7.37%		
Bootstrap support for H2XWC8 as seed ortholog is 45%.
Alternative seed ortholog is F7AJQ7 (1 bits away from this cluster)
Bootstrap support for E1C3G2 as seed ortholog is 75%.

Group of orthologs #4747. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 G.gallus:87

H2Y0Z3              	100.00%		F1N8K5              	100.00%
                    	       		F1NGL1              	39.95%
Bootstrap support for H2Y0Z3 as seed ortholog is 100%.
Bootstrap support for F1N8K5 as seed ortholog is 100%.

Group of orthologs #4748. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 G.gallus:87

F6U9N4              	100.00%		F1NTK0              	100.00%
Bootstrap support for F6U9N4 as seed ortholog is 100%.
Bootstrap support for F1NTK0 as seed ortholog is 100%.

Group of orthologs #4749. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 G.gallus:87

F6YQ21              	100.00%		F1NPL0              	100.00%
Bootstrap support for F6YQ21 as seed ortholog is 100%.
Bootstrap support for F1NPL0 as seed ortholog is 100%.

Group of orthologs #4750. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 G.gallus:87

H2XR45              	100.00%		Q5ZJW7              	100.00%
Bootstrap support for H2XR45 as seed ortholog is 100%.
Bootstrap support for Q5ZJW7 as seed ortholog is 100%.

Group of orthologs #4751. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 G.gallus:86

H2Y3I1              	100.00%		F1NTA2              	100.00%
H2XKI5              	26.46%		
H2XW66              	17.50%		
Bootstrap support for H2Y3I1 as seed ortholog is 100%.
Bootstrap support for F1NTA2 as seed ortholog is 100%.

Group of orthologs #4752. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 G.gallus:86

F6RZL7              	100.00%		E1C1X1              	100.00%
                    	       		H9KZI6              	75.38%
Bootstrap support for F6RZL7 as seed ortholog is 100%.
Bootstrap support for E1C1X1 as seed ortholog is 100%.

Group of orthologs #4753. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 G.gallus:86

F6Z4I8              	100.00%		Q9PUU8              	100.00%
                    	       		F1NES5              	18.58%
Bootstrap support for F6Z4I8 as seed ortholog is 100%.
Bootstrap support for Q9PUU8 as seed ortholog is 100%.

Group of orthologs #4754. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 G.gallus:86

H2XLR4              	100.00%		Q5ZJC4              	100.00%
                    	       		F1P345              	40.86%
Bootstrap support for H2XLR4 as seed ortholog is 100%.
Bootstrap support for Q5ZJC4 as seed ortholog is 100%.

Group of orthologs #4755. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 G.gallus:86

F6ZPP4              	100.00%		E1C4V1              	100.00%
Bootstrap support for F6ZPP4 as seed ortholog is 100%.
Bootstrap support for E1C4V1 as seed ortholog is 100%.

Group of orthologs #4756. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 G.gallus:86

F6Y9P8              	100.00%		F1NGP5              	100.00%
Bootstrap support for F6Y9P8 as seed ortholog is 100%.
Bootstrap support for F1NGP5 as seed ortholog is 100%.

Group of orthologs #4757. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 G.gallus:86

H2XKU1              	100.00%		E1C7B1              	100.00%
Bootstrap support for H2XKU1 as seed ortholog is 100%.
Bootstrap support for E1C7B1 as seed ortholog is 100%.

Group of orthologs #4758. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 G.gallus:86

H2XKF6              	100.00%		F1N967              	100.00%
Bootstrap support for H2XKF6 as seed ortholog is 100%.
Bootstrap support for F1N967 as seed ortholog is 100%.

Group of orthologs #4759. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 G.gallus:2

F7A2A3              	100.00%		F1NXS8              	100.00%
Bootstrap support for F7A2A3 as seed ortholog is 46%.
Alternative seed ortholog is F6PMX0 (2 bits away from this cluster)
Bootstrap support for F1NXS8 as seed ortholog is 52%.
Alternative seed ortholog is E1C8E6 (2 bits away from this cluster)

Group of orthologs #4760. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 G.gallus:86

H2XXA8              	100.00%		F1NSE8              	100.00%
Bootstrap support for H2XXA8 as seed ortholog is 100%.
Bootstrap support for F1NSE8 as seed ortholog is 100%.

Group of orthologs #4761. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 G.gallus:24

F7BKN7              	100.00%		F1P1D7              	100.00%
                    	       		F1NXL1              	24.32%
                    	       		F1NRZ3              	19.05%
Bootstrap support for F7BKN7 as seed ortholog is 66%.
Alternative seed ortholog is F6YS37 (9 bits away from this cluster)
Bootstrap support for F1P1D7 as seed ortholog is 74%.
Alternative seed ortholog is Q90944 (24 bits away from this cluster)

Group of orthologs #4762. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 G.gallus:85

H2XWA9              	100.00%		E1BVD2              	100.00%
                    	       		F1NV94              	33.50%
Bootstrap support for H2XWA9 as seed ortholog is 100%.
Bootstrap support for E1BVD2 as seed ortholog is 100%.

Group of orthologs #4763. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 G.gallus:85

F6U9D1              	100.00%		E1C9F9              	100.00%
Bootstrap support for F6U9D1 as seed ortholog is 100%.
Bootstrap support for E1C9F9 as seed ortholog is 100%.

Group of orthologs #4764. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 G.gallus:85

F6PZG6              	100.00%		F1NSN3              	100.00%
Bootstrap support for F6PZG6 as seed ortholog is 100%.
Bootstrap support for F1NSN3 as seed ortholog is 100%.

Group of orthologs #4765. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 G.gallus:85

F6ZE87              	100.00%		E1C7P1              	100.00%
Bootstrap support for F6ZE87 as seed ortholog is 100%.
Bootstrap support for E1C7P1 as seed ortholog is 100%.

Group of orthologs #4766. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 G.gallus:85

F6PHD5              	100.00%		H9L0I5              	100.00%
Bootstrap support for F6PHD5 as seed ortholog is 100%.
Bootstrap support for H9L0I5 as seed ortholog is 100%.

Group of orthologs #4767. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 G.gallus:85

F7BMV4              	100.00%		Q1T765              	100.00%
Bootstrap support for F7BMV4 as seed ortholog is 100%.
Bootstrap support for Q1T765 as seed ortholog is 100%.

Group of orthologs #4768. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 G.gallus:85

H2Y219              	100.00%		F1NWD2              	100.00%
Bootstrap support for H2Y219 as seed ortholog is 100%.
Bootstrap support for F1NWD2 as seed ortholog is 100%.

Group of orthologs #4769. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 G.gallus:84

H2XV39              	100.00%		Q90987              	100.00%
                    	       		O93388              	62.21%
                    	       		E1BRN5              	52.67%
                    	       		P31395              	38.93%
Bootstrap support for H2XV39 as seed ortholog is 100%.
Bootstrap support for Q90987 as seed ortholog is 100%.

Group of orthologs #4770. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 G.gallus:84

H2XJI5              	100.00%		F1NQ52              	100.00%
                    	       		E1C9E2              	17.15%
                    	       		F1NI31              	17.15%
Bootstrap support for H2XJI5 as seed ortholog is 100%.
Bootstrap support for F1NQ52 as seed ortholog is 100%.

Group of orthologs #4771. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 G.gallus:84

F6TXQ6              	100.00%		E1BSX0              	100.00%
F6V198              	34.95%		
Bootstrap support for F6TXQ6 as seed ortholog is 100%.
Bootstrap support for E1BSX0 as seed ortholog is 100%.

Group of orthologs #4772. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 G.gallus:18

H2XWH1              	100.00%		F1NEY0              	100.00%
                    	       		P49416              	5.73%
Bootstrap support for H2XWH1 as seed ortholog is 100%.
Bootstrap support for F1NEY0 as seed ortholog is 23%.
Alternative seed ortholog is P26261 (18 bits away from this cluster)

Group of orthologs #4773. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 G.gallus:84

F6TJY9              	100.00%		E1BSJ2              	100.00%
Bootstrap support for F6TJY9 as seed ortholog is 100%.
Bootstrap support for E1BSJ2 as seed ortholog is 100%.

Group of orthologs #4774. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 G.gallus:84

F7BCU9              	100.00%		E1BVX8              	100.00%
Bootstrap support for F7BCU9 as seed ortholog is 100%.
Bootstrap support for E1BVX8 as seed ortholog is 100%.

Group of orthologs #4775. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 G.gallus:84

F6W8X6              	100.00%		F1NB42              	100.00%
Bootstrap support for F6W8X6 as seed ortholog is 100%.
Bootstrap support for F1NB42 as seed ortholog is 100%.

Group of orthologs #4776. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 G.gallus:84

F6TZP7              	100.00%		F1NT52              	100.00%
Bootstrap support for F6TZP7 as seed ortholog is 100%.
Bootstrap support for F1NT52 as seed ortholog is 100%.

Group of orthologs #4777. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 G.gallus:84

Q8T894              	100.00%		E1C3C5              	100.00%
Bootstrap support for Q8T894 as seed ortholog is 77%.
Bootstrap support for E1C3C5 as seed ortholog is 100%.

Group of orthologs #4778. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 G.gallus:84

H2XM81              	100.00%		Q1T7C1              	100.00%
Bootstrap support for H2XM81 as seed ortholog is 100%.
Bootstrap support for Q1T7C1 as seed ortholog is 100%.

Group of orthologs #4779. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:83

H2XRF2              	100.00%		E1BZG8              	100.00%
                    	       		F1N8E0              	28.43%
                    	       		F1NWJ8              	15.74%
Bootstrap support for H2XRF2 as seed ortholog is 100%.
Bootstrap support for E1BZG8 as seed ortholog is 100%.

Group of orthologs #4780. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:83

F6QS67              	100.00%		E1C517              	100.00%
Bootstrap support for F6QS67 as seed ortholog is 100%.
Bootstrap support for E1C517 as seed ortholog is 100%.

Group of orthologs #4781. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:83

F6U1G9              	100.00%		F1NA75              	100.00%
Bootstrap support for F6U1G9 as seed ortholog is 100%.
Bootstrap support for F1NA75 as seed ortholog is 100%.

Group of orthologs #4782. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:83

F7A6R2              	100.00%		E1C3C4              	100.00%
Bootstrap support for F7A6R2 as seed ortholog is 100%.
Bootstrap support for E1C3C4 as seed ortholog is 100%.

Group of orthologs #4783. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:83

H2XRN3              	100.00%		E1BVY8              	100.00%
Bootstrap support for H2XRN3 as seed ortholog is 100%.
Bootstrap support for E1BVY8 as seed ortholog is 100%.

Group of orthologs #4784. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:4

F6ZTY6              	100.00%		F1NBW0              	100.00%
Bootstrap support for F6ZTY6 as seed ortholog is 100%.
Bootstrap support for F1NBW0 as seed ortholog is 53%.
Alternative seed ortholog is E1C833 (4 bits away from this cluster)

Group of orthologs #4785. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 G.gallus:83

F6WM13              	100.00%		F1P5F2              	100.00%
Bootstrap support for F6WM13 as seed ortholog is 85%.
Bootstrap support for F1P5F2 as seed ortholog is 100%.

Group of orthologs #4786. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:83

F6ZTS3              	100.00%		Q5ZLH9              	100.00%
Bootstrap support for F6ZTS3 as seed ortholog is 100%.
Bootstrap support for Q5ZLH9 as seed ortholog is 100%.

Group of orthologs #4787. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 G.gallus:39

F7ABX1              	100.00%		Q9I8I2              	100.00%
Bootstrap support for F7ABX1 as seed ortholog is 74%.
Alternative seed ortholog is F6TGL0 (23 bits away from this cluster)
Bootstrap support for Q9I8I2 as seed ortholog is 92%.

Group of orthologs #4788. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 G.gallus:83

Q8HIN7              	100.00%		P18937              	100.00%
Bootstrap support for Q8HIN7 as seed ortholog is 100%.
Bootstrap support for P18937 as seed ortholog is 100%.

Group of orthologs #4789. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 G.gallus:7

H2XRA5              	100.00%		F1P4Y4              	100.00%
                    	       		E1C2A3              	12.10%
Bootstrap support for H2XRA5 as seed ortholog is 53%.
Alternative seed ortholog is H2XZD2 (3 bits away from this cluster)
Bootstrap support for F1P4Y4 as seed ortholog is 59%.
Alternative seed ortholog is F1NPT7 (7 bits away from this cluster)

Group of orthologs #4790. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 G.gallus:82

H2XQH9              	100.00%		Q5ZML5              	100.00%
                    	       		H9L1V6              	16.83%
Bootstrap support for H2XQH9 as seed ortholog is 100%.
Bootstrap support for Q5ZML5 as seed ortholog is 100%.

Group of orthologs #4791. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 G.gallus:82

F6TIG3              	100.00%		F1NI48              	100.00%
Bootstrap support for F6TIG3 as seed ortholog is 100%.
Bootstrap support for F1NI48 as seed ortholog is 100%.

Group of orthologs #4792. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 G.gallus:82

H2XQC0              	100.00%		E1C5V2              	100.00%
Bootstrap support for H2XQC0 as seed ortholog is 100%.
Bootstrap support for E1C5V2 as seed ortholog is 100%.

Group of orthologs #4793. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 G.gallus:82

H2XYU7              	100.00%		F1N975              	100.00%
Bootstrap support for H2XYU7 as seed ortholog is 100%.
Bootstrap support for F1N975 as seed ortholog is 100%.

Group of orthologs #4794. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 G.gallus:82

H2Y0B5              	100.00%		Q5ZJV5              	100.00%
Bootstrap support for H2Y0B5 as seed ortholog is 100%.
Bootstrap support for Q5ZJV5 as seed ortholog is 100%.

Group of orthologs #4795. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:81

F6QZW7              	100.00%		E1C021              	100.00%
                    	       		E1C289              	37.19%
Bootstrap support for F6QZW7 as seed ortholog is 100%.
Bootstrap support for E1C021 as seed ortholog is 100%.

Group of orthologs #4796. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:81

F6PML6              	100.00%		E1C8S6              	100.00%
                    	       		H9KZB9              	100.00%
Bootstrap support for F6PML6 as seed ortholog is 100%.
Bootstrap support for E1C8S6 as seed ortholog is 100%.
Bootstrap support for H9KZB9 as seed ortholog is 100%.

Group of orthologs #4797. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:81

F6RB50              	100.00%		F1NA86              	100.00%
F6W9U8              	7.41%		
Bootstrap support for F6RB50 as seed ortholog is 100%.
Bootstrap support for F1NA86 as seed ortholog is 100%.

Group of orthologs #4798. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 G.gallus:22

F6UL80              	100.00%		O57601              	100.00%
                    	       		Q9DE09              	18.51%
Bootstrap support for F6UL80 as seed ortholog is 71%.
Alternative seed ortholog is Q8IAC7 (27 bits away from this cluster)
Bootstrap support for O57601 as seed ortholog is 78%.

Group of orthologs #4799. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:81

F7B8Z4              	100.00%		Q5ZLY8              	100.00%
                    	       		Q5ZIF8              	62.59%
Bootstrap support for F7B8Z4 as seed ortholog is 100%.
Bootstrap support for Q5ZLY8 as seed ortholog is 100%.

Group of orthologs #4800. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:81

F6RE92              	100.00%		E1C5F1              	100.00%
Bootstrap support for F6RE92 as seed ortholog is 100%.
Bootstrap support for E1C5F1 as seed ortholog is 100%.

Group of orthologs #4801. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:81

F6WGY1              	100.00%		E1C0S6              	100.00%
Bootstrap support for F6WGY1 as seed ortholog is 100%.
Bootstrap support for E1C0S6 as seed ortholog is 100%.

Group of orthologs #4802. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:81

H2XP14              	100.00%		E1BRK6              	100.00%
Bootstrap support for H2XP14 as seed ortholog is 100%.
Bootstrap support for E1BRK6 as seed ortholog is 100%.

Group of orthologs #4803. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:81

F6WAE5              	100.00%		F1NLH3              	100.00%
Bootstrap support for F6WAE5 as seed ortholog is 100%.
Bootstrap support for F1NLH3 as seed ortholog is 100%.

Group of orthologs #4804. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:81

F6TNV5              	100.00%		F1P4I1              	100.00%
Bootstrap support for F6TNV5 as seed ortholog is 100%.
Bootstrap support for F1P4I1 as seed ortholog is 100%.

Group of orthologs #4805. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:81

H2XPZ5              	100.00%		F1NPL9              	100.00%
Bootstrap support for H2XPZ5 as seed ortholog is 100%.
Bootstrap support for F1NPL9 as seed ortholog is 100%.

Group of orthologs #4806. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:81

H2XMV2              	100.00%		Q5ZIM2              	100.00%
Bootstrap support for H2XMV2 as seed ortholog is 100%.
Bootstrap support for Q5ZIM2 as seed ortholog is 100%.

Group of orthologs #4807. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 G.gallus:81

H2Y2G8              	100.00%		F1P286              	100.00%
Bootstrap support for H2Y2G8 as seed ortholog is 100%.
Bootstrap support for F1P286 as seed ortholog is 100%.

Group of orthologs #4808. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 G.gallus:26

H2XVJ6              	100.00%		F1P4B6              	100.00%
                    	       		H9L0C5              	23.05%
Bootstrap support for H2XVJ6 as seed ortholog is 65%.
Alternative seed ortholog is F6PPN6 (14 bits away from this cluster)
Bootstrap support for F1P4B6 as seed ortholog is 75%.

Group of orthologs #4809. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 G.gallus:80

F6ZV67              	100.00%		E1C5M6              	100.00%
Bootstrap support for F6ZV67 as seed ortholog is 100%.
Bootstrap support for E1C5M6 as seed ortholog is 100%.

Group of orthologs #4810. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 G.gallus:80

F6X598              	100.00%		Q5ZK61              	100.00%
Bootstrap support for F6X598 as seed ortholog is 100%.
Bootstrap support for Q5ZK61 as seed ortholog is 100%.

Group of orthologs #4811. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 G.gallus:80

H2XXI7              	100.00%		H9L0Y4              	100.00%
Bootstrap support for H2XXI7 as seed ortholog is 100%.
Bootstrap support for H9L0Y4 as seed ortholog is 100%.

Group of orthologs #4812. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:5

Q4H2J7              	100.00%		F1P0C2              	100.00%
                    	       		F1NKT6              	27.43%
                    	       		E1C442              	8.25%
                    	       		F1NVC4              	7.77%
                    	       		F1NY43              	7.65%
                    	       		E1BZV5              	6.31%
Bootstrap support for Q4H2J7 as seed ortholog is 100%.
Bootstrap support for F1P0C2 as seed ortholog is 62%.
Alternative seed ortholog is E1C3K5 (5 bits away from this cluster)

Group of orthologs #4813. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:79

H2XK86              	100.00%		E1C0X0              	100.00%
                    	       		F1P215              	63.11%
                    	       		F1P3Q6              	38.16%
Bootstrap support for H2XK86 as seed ortholog is 100%.
Bootstrap support for E1C0X0 as seed ortholog is 100%.

Group of orthologs #4814. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:79

F6TZN8              	100.00%		E1C6W1              	100.00%
Bootstrap support for F6TZN8 as seed ortholog is 100%.
Bootstrap support for E1C6W1 as seed ortholog is 100%.

Group of orthologs #4815. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:79

F6SET0              	100.00%		F1NJ25              	100.00%
Bootstrap support for F6SET0 as seed ortholog is 100%.
Bootstrap support for F1NJ25 as seed ortholog is 100%.

Group of orthologs #4816. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 G.gallus:21

F6V610              	100.00%		F1NDB0              	100.00%
Bootstrap support for F6V610 as seed ortholog is 56%.
Alternative seed ortholog is F6YEZ2 (13 bits away from this cluster)
Bootstrap support for F1NDB0 as seed ortholog is 77%.

Group of orthologs #4817. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:79

F6ZFU8              	100.00%		E1C2E9              	100.00%
Bootstrap support for F6ZFU8 as seed ortholog is 100%.
Bootstrap support for E1C2E9 as seed ortholog is 100%.

Group of orthologs #4818. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:79

F6PQY2              	100.00%		F1P341              	100.00%
Bootstrap support for F6PQY2 as seed ortholog is 100%.
Bootstrap support for F1P341 as seed ortholog is 100%.

Group of orthologs #4819. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:79

F6ZJE6              	100.00%		F1NSQ1              	100.00%
Bootstrap support for F6ZJE6 as seed ortholog is 100%.
Bootstrap support for F1NSQ1 as seed ortholog is 100%.

Group of orthologs #4820. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:2

Q4H363              	100.00%		E1C2J1              	100.00%
Bootstrap support for Q4H363 as seed ortholog is 100%.
Bootstrap support for E1C2J1 as seed ortholog is 52%.
Alternative seed ortholog is Q98924 (2 bits away from this cluster)

Group of orthologs #4821. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 G.gallus:79

F6ZGB0              	100.00%		Q5ZI12              	100.00%
Bootstrap support for F6ZGB0 as seed ortholog is 79%.
Bootstrap support for Q5ZI12 as seed ortholog is 100%.

Group of orthologs #4822. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:79

H2XTV9              	100.00%		Q5ZLR1              	100.00%
Bootstrap support for H2XTV9 as seed ortholog is 100%.
Bootstrap support for Q5ZLR1 as seed ortholog is 100%.

Group of orthologs #4823. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 G.gallus:79

H2Y379              	100.00%		Q5ZLH1              	100.00%
Bootstrap support for H2Y379 as seed ortholog is 100%.
Bootstrap support for Q5ZLH1 as seed ortholog is 100%.

Group of orthologs #4824. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 G.gallus:78

F6RN20              	100.00%		F1P319              	100.00%
                    	       		F1NZP9              	53.36%
Bootstrap support for F6RN20 as seed ortholog is 100%.
Bootstrap support for F1P319 as seed ortholog is 100%.

Group of orthologs #4825. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 G.gallus:78

H2XP82              	100.00%		E1BSW7              	100.00%
Bootstrap support for H2XP82 as seed ortholog is 100%.
Bootstrap support for E1BSW7 as seed ortholog is 100%.

Group of orthologs #4826. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 G.gallus:78

H2XU60              	100.00%		E1C896              	100.00%
Bootstrap support for H2XU60 as seed ortholog is 100%.
Bootstrap support for E1C896 as seed ortholog is 100%.

Group of orthologs #4827. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 G.gallus:78

F6W366              	100.00%		Q6RFL5              	100.00%
Bootstrap support for F6W366 as seed ortholog is 100%.
Bootstrap support for Q6RFL5 as seed ortholog is 100%.

Group of orthologs #4828. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 G.gallus:78

H2Y0C6              	100.00%		Q5ZJ97              	100.00%
Bootstrap support for H2Y0C6 as seed ortholog is 100%.
Bootstrap support for Q5ZJ97 as seed ortholog is 100%.

Group of orthologs #4829. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 G.gallus:16

F6UAV6              	100.00%		H9L0Z2              	100.00%
F6PJR0              	10.94%		
H2XLX6              	9.77%		
F6XA77              	8.59%		
Bootstrap support for F6UAV6 as seed ortholog is 100%.
Bootstrap support for H9L0Z2 as seed ortholog is 73%.
Alternative seed ortholog is F1NPU7 (16 bits away from this cluster)

Group of orthologs #4830. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 G.gallus:77

F6UIC9              	100.00%		E1C2X7              	100.00%
                    	       		F1NYJ8              	32.42%
                    	       		F1NIL5              	6.26%
Bootstrap support for F6UIC9 as seed ortholog is 100%.
Bootstrap support for E1C2X7 as seed ortholog is 100%.

Group of orthologs #4831. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 G.gallus:77

H2XKE5              	100.00%		E1BUJ9              	100.00%
H2XPX8              	38.82%		E1BQD3              	76.05%
Bootstrap support for H2XKE5 as seed ortholog is 100%.
Bootstrap support for E1BUJ9 as seed ortholog is 100%.

Group of orthologs #4832. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 G.gallus:77

F6U568              	100.00%		E1BSM2              	100.00%
Bootstrap support for F6U568 as seed ortholog is 100%.
Bootstrap support for E1BSM2 as seed ortholog is 100%.

Group of orthologs #4833. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 G.gallus:77

F7A082              	100.00%		E1C5R2              	100.00%
Bootstrap support for F7A082 as seed ortholog is 54%.
Alternative seed ortholog is F6WRI9 (4 bits away from this cluster)
Bootstrap support for E1C5R2 as seed ortholog is 100%.

Group of orthologs #4834. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 G.gallus:77

F6R0Q7              	100.00%		F1P3U2              	100.00%
Bootstrap support for F6R0Q7 as seed ortholog is 100%.
Bootstrap support for F1P3U2 as seed ortholog is 100%.

Group of orthologs #4835. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 G.gallus:77

H2XJH9              	100.00%		E1C4C7              	100.00%
Bootstrap support for H2XJH9 as seed ortholog is 100%.
Bootstrap support for E1C4C7 as seed ortholog is 100%.

Group of orthologs #4836. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 G.gallus:18

H2XUX1              	100.00%		E1C1F7              	100.00%
Bootstrap support for H2XUX1 as seed ortholog is 100%.
Bootstrap support for E1C1F7 as seed ortholog is 89%.

Group of orthologs #4837. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 G.gallus:77

H2XJX4              	100.00%		F1NLL4              	100.00%
Bootstrap support for H2XJX4 as seed ortholog is 100%.
Bootstrap support for F1NLL4 as seed ortholog is 100%.

Group of orthologs #4838. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 G.gallus:77

H2XS09              	100.00%		F1P203              	100.00%
Bootstrap support for H2XS09 as seed ortholog is 100%.
Bootstrap support for F1P203 as seed ortholog is 100%.

Group of orthologs #4839. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:14

F6X139              	100.00%		Q5ZI23              	100.00%
F6X7G6              	26.76%		Q5ZLY2              	42.47%
Bootstrap support for F6X139 as seed ortholog is 100%.
Bootstrap support for Q5ZI23 as seed ortholog is 68%.
Alternative seed ortholog is H9KYS9 (14 bits away from this cluster)

Group of orthologs #4840. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:76

F7BQ61              	100.00%		E1BQN5              	100.00%
H2XQ94              	40.18%		
Bootstrap support for F7BQ61 as seed ortholog is 100%.
Bootstrap support for E1BQN5 as seed ortholog is 100%.

Group of orthologs #4841. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:76

H2XSS0              	100.00%		Q07460              	100.00%
                    	       		Q09121              	69.33%
Bootstrap support for H2XSS0 as seed ortholog is 100%.
Bootstrap support for Q07460 as seed ortholog is 100%.

Group of orthologs #4842. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:76

F6QXJ4              	100.00%		E1BTM3              	100.00%
Bootstrap support for F6QXJ4 as seed ortholog is 100%.
Bootstrap support for E1BTM3 as seed ortholog is 100%.

Group of orthologs #4843. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:76

F6W1Z3              	100.00%		F1NH38              	100.00%
Bootstrap support for F6W1Z3 as seed ortholog is 100%.
Bootstrap support for F1NH38 as seed ortholog is 100%.

Group of orthologs #4844. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:76

H2XS46              	100.00%		E1BSC5              	100.00%
Bootstrap support for H2XS46 as seed ortholog is 100%.
Bootstrap support for E1BSC5 as seed ortholog is 100%.

Group of orthologs #4845. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:76

H2XJV8              	100.00%		F1N9D1              	100.00%
Bootstrap support for H2XJV8 as seed ortholog is 100%.
Bootstrap support for F1N9D1 as seed ortholog is 100%.

Group of orthologs #4846. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:76

H2XN93              	100.00%		F1NW69              	100.00%
Bootstrap support for H2XN93 as seed ortholog is 100%.
Bootstrap support for F1NW69 as seed ortholog is 100%.

Group of orthologs #4847. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:76

H2XQL9              	100.00%		F1NUR5              	100.00%
Bootstrap support for H2XQL9 as seed ortholog is 100%.
Bootstrap support for F1NUR5 as seed ortholog is 100%.

Group of orthologs #4848. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:76

H2XQR9              	100.00%		F1NWI0              	100.00%
Bootstrap support for H2XQR9 as seed ortholog is 100%.
Bootstrap support for F1NWI0 as seed ortholog is 100%.

Group of orthologs #4849. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 G.gallus:76

H2Y1U7              	100.00%		F1NKQ7              	100.00%
Bootstrap support for H2Y1U7 as seed ortholog is 100%.
Bootstrap support for F1NKQ7 as seed ortholog is 100%.

Group of orthologs #4850. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 G.gallus:75

F6WPE8              	100.00%		P52804              	100.00%
F6U302              	29.88%		P52802              	40.20%
Q4H3M1              	5.28%		
Bootstrap support for F6WPE8 as seed ortholog is 100%.
Bootstrap support for P52804 as seed ortholog is 100%.

Group of orthologs #4851. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 G.gallus:3

F6R3I1              	100.00%		E1BYZ3              	100.00%
                    	       		F1N8S7              	20.36%
                    	       		F1NNY3              	5.90%
Bootstrap support for F6R3I1 as seed ortholog is 100%.
Bootstrap support for E1BYZ3 as seed ortholog is 55%.
Alternative seed ortholog is F1P2R6 (3 bits away from this cluster)

Group of orthologs #4852. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 G.gallus:19

F6Y805              	100.00%		E1BXP5              	100.00%
Bootstrap support for F6Y805 as seed ortholog is 57%.
Alternative seed ortholog is H2XRM8 (26 bits away from this cluster)
Bootstrap support for E1BXP5 as seed ortholog is 20%.
Alternative seed ortholog is F1NK21 (19 bits away from this cluster)

Group of orthologs #4853. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 G.gallus:75

F6SD42              	100.00%		Q5ZK25              	100.00%
Bootstrap support for F6SD42 as seed ortholog is 100%.
Bootstrap support for Q5ZK25 as seed ortholog is 100%.

Group of orthologs #4854. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 G.gallus:75

H2XQK4              	100.00%		F1NNE9              	100.00%
Bootstrap support for H2XQK4 as seed ortholog is 100%.
Bootstrap support for F1NNE9 as seed ortholog is 100%.

Group of orthologs #4855. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 G.gallus:75

H2XUL3              	100.00%		F1NVP1              	100.00%
Bootstrap support for H2XUL3 as seed ortholog is 100%.
Bootstrap support for F1NVP1 as seed ortholog is 100%.

Group of orthologs #4856. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 G.gallus:24

H2XUG2              	100.00%		E1C9H3              	100.00%
                    	       		E1C5Z4              	6.70%
Bootstrap support for H2XUG2 as seed ortholog is 100%.
Bootstrap support for E1C9H3 as seed ortholog is 84%.

Group of orthologs #4857. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 G.gallus:74

F6QIW3              	100.00%		F1P3G6              	100.00%
Bootstrap support for F6QIW3 as seed ortholog is 100%.
Bootstrap support for F1P3G6 as seed ortholog is 100%.

Group of orthologs #4858. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 G.gallus:74

H2XZX7              	100.00%		E1BQL8              	100.00%
Bootstrap support for H2XZX7 as seed ortholog is 72%.
Alternative seed ortholog is F6PKC1 (25 bits away from this cluster)
Bootstrap support for E1BQL8 as seed ortholog is 100%.

Group of orthologs #4859. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 G.gallus:73

F6YG96              	100.00%		F1N887              	100.00%
Bootstrap support for F6YG96 as seed ortholog is 100%.
Bootstrap support for F1N887 as seed ortholog is 100%.

Group of orthologs #4860. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 G.gallus:73

H2XRN2              	100.00%		E1BX62              	100.00%
Bootstrap support for H2XRN2 as seed ortholog is 100%.
Bootstrap support for E1BX62 as seed ortholog is 100%.

Group of orthologs #4861. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 G.gallus:73

H2Y276              	100.00%		F1NHR5              	100.00%
Bootstrap support for H2Y276 as seed ortholog is 100%.
Bootstrap support for F1NHR5 as seed ortholog is 100%.

Group of orthologs #4862. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 G.gallus:73

H2XUT9              	100.00%		H9L123              	100.00%
Bootstrap support for H2XUT9 as seed ortholog is 100%.
Bootstrap support for H9L123 as seed ortholog is 100%.

Group of orthologs #4863. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 G.gallus:72

H2XMI0              	100.00%		F1NUW2              	100.00%
F6UNF1              	8.07%		F1P0D3              	19.77%
Bootstrap support for H2XMI0 as seed ortholog is 83%.
Bootstrap support for F1NUW2 as seed ortholog is 100%.

Group of orthologs #4864. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 G.gallus:72

F6U1J3              	100.00%		F1NE76              	100.00%
Bootstrap support for F6U1J3 as seed ortholog is 100%.
Bootstrap support for F1NE76 as seed ortholog is 100%.

Group of orthologs #4865. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 G.gallus:72

F7BLR9              	100.00%		E1C0H3              	100.00%
Bootstrap support for F7BLR9 as seed ortholog is 100%.
Bootstrap support for E1C0H3 as seed ortholog is 100%.

Group of orthologs #4866. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 G.gallus:72

F6UKU4              	100.00%		F1NW42              	100.00%
Bootstrap support for F6UKU4 as seed ortholog is 100%.
Bootstrap support for F1NW42 as seed ortholog is 100%.

Group of orthologs #4867. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 G.gallus:72

F6PWH2              	100.00%		Q5ZI34              	100.00%
Bootstrap support for F6PWH2 as seed ortholog is 100%.
Bootstrap support for Q5ZI34 as seed ortholog is 100%.

Group of orthologs #4868. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 G.gallus:72

H2XY92              	100.00%		E1BZ37              	100.00%
Bootstrap support for H2XY92 as seed ortholog is 100%.
Bootstrap support for E1BZ37 as seed ortholog is 100%.

Group of orthologs #4869. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 G.gallus:72

F6T6X1              	100.00%		Q5ZMS6              	100.00%
Bootstrap support for F6T6X1 as seed ortholog is 100%.
Bootstrap support for Q5ZMS6 as seed ortholog is 100%.

Group of orthologs #4870. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 G.gallus:72

Q4H3Q3              	100.00%		E1C8N7              	100.00%
Bootstrap support for Q4H3Q3 as seed ortholog is 100%.
Bootstrap support for E1C8N7 as seed ortholog is 100%.

Group of orthologs #4871. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 G.gallus:72

H2XQZ1              	100.00%		F1P0S2              	100.00%
Bootstrap support for H2XQZ1 as seed ortholog is 100%.
Bootstrap support for F1P0S2 as seed ortholog is 100%.

Group of orthologs #4872. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 G.gallus:72

Q4H3D0              	100.00%		F1NPG1              	100.00%
Bootstrap support for Q4H3D0 as seed ortholog is 100%.
Bootstrap support for F1NPG1 as seed ortholog is 100%.

Group of orthologs #4873. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 G.gallus:71

F7BCF2              	100.00%		E1BRP6              	100.00%
                    	       		F1NEC1              	40.66%
Bootstrap support for F7BCF2 as seed ortholog is 100%.
Bootstrap support for E1BRP6 as seed ortholog is 100%.

Group of orthologs #4874. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 G.gallus:71

F6TV42              	100.00%		F1P3B1              	100.00%
Bootstrap support for F6TV42 as seed ortholog is 100%.
Bootstrap support for F1P3B1 as seed ortholog is 100%.

Group of orthologs #4875. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 G.gallus:71

F6YI31              	100.00%		F1NUV3              	100.00%
Bootstrap support for F6YI31 as seed ortholog is 100%.
Bootstrap support for F1NUV3 as seed ortholog is 100%.

Group of orthologs #4876. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 G.gallus:71

F7B3I7              	100.00%		F1P342              	100.00%
Bootstrap support for F7B3I7 as seed ortholog is 100%.
Bootstrap support for F1P342 as seed ortholog is 100%.

Group of orthologs #4877. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:70

F6X3Y1              	100.00%		E1BYZ5              	100.00%
                    	       		E1BQK4              	51.40%
                    	       		E1C957              	47.99%
                    	       		E1BZK2              	41.53%
Bootstrap support for F6X3Y1 as seed ortholog is 100%.
Bootstrap support for E1BYZ5 as seed ortholog is 100%.

Group of orthologs #4878. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:70

F6QNI1              	100.00%		E1BXR6              	100.00%
                    	       		E1BQS7              	36.89%
Bootstrap support for F6QNI1 as seed ortholog is 100%.
Bootstrap support for E1BXR6 as seed ortholog is 100%.

Group of orthologs #4879. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:70

F6PZ24              	100.00%		F1NSJ0              	100.00%
F6W2H8              	14.77%		
Bootstrap support for F6PZ24 as seed ortholog is 100%.
Bootstrap support for F1NSJ0 as seed ortholog is 100%.

Group of orthologs #4880. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:70

H2XYC4              	100.00%		E1C6D3              	100.00%
                    	       		Q5ZKB1              	10.19%
Bootstrap support for H2XYC4 as seed ortholog is 100%.
Bootstrap support for E1C6D3 as seed ortholog is 100%.

Group of orthologs #4881. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:70

F6SSA8              	100.00%		F1NDD3              	100.00%
Bootstrap support for F6SSA8 as seed ortholog is 100%.
Bootstrap support for F1NDD3 as seed ortholog is 100%.

Group of orthologs #4882. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:70

F6QM26              	100.00%		F1NRZ1              	100.00%
Bootstrap support for F6QM26 as seed ortholog is 100%.
Bootstrap support for F1NRZ1 as seed ortholog is 100%.

Group of orthologs #4883. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:70

F6PXZ5              	100.00%		F1NWV3              	100.00%
Bootstrap support for F6PXZ5 as seed ortholog is 100%.
Bootstrap support for F1NWV3 as seed ortholog is 100%.

Group of orthologs #4884. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:70

H2XQ07              	100.00%		E1BSC2              	100.00%
Bootstrap support for H2XQ07 as seed ortholog is 100%.
Bootstrap support for E1BSC2 as seed ortholog is 100%.

Group of orthologs #4885. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 G.gallus:70

F6YAV6              	100.00%		Q98SU9              	100.00%
Bootstrap support for F6YAV6 as seed ortholog is 100%.
Bootstrap support for Q98SU9 as seed ortholog is 100%.

Group of orthologs #4886. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 G.gallus:69

H2Y210              	100.00%		F1NI46              	100.00%
                    	       		P17790              	33.70%
Bootstrap support for H2Y210 as seed ortholog is 67%.
Alternative seed ortholog is F6X9K9 (13 bits away from this cluster)
Bootstrap support for F1NI46 as seed ortholog is 100%.

Group of orthologs #4887. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 G.gallus:69

H2Y196              	100.00%		F1P3P3              	100.00%
                    	       		F1NLT8              	66.28%
Bootstrap support for H2Y196 as seed ortholog is 100%.
Bootstrap support for F1P3P3 as seed ortholog is 100%.

Group of orthologs #4888. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 G.gallus:69

F6VPL1              	100.00%		F1NZF4              	100.00%
Bootstrap support for F6VPL1 as seed ortholog is 100%.
Bootstrap support for F1NZF4 as seed ortholog is 100%.

Group of orthologs #4889. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 G.gallus:69

H2XYB2              	100.00%		F1NWZ5              	100.00%
Bootstrap support for H2XYB2 as seed ortholog is 100%.
Bootstrap support for F1NWZ5 as seed ortholog is 100%.

Group of orthologs #4890. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 G.gallus:69

H2XYM8              	100.00%		F1NXZ8              	100.00%
Bootstrap support for H2XYM8 as seed ortholog is 100%.
Bootstrap support for F1NXZ8 as seed ortholog is 100%.

Group of orthologs #4891. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 G.gallus:68

H2XYZ5              	100.00%		F1NDG8              	100.00%
H2XZE9              	28.94%		
H2XUN8              	16.48%		
H2XRY4              	12.45%		
Bootstrap support for H2XYZ5 as seed ortholog is 100%.
Bootstrap support for F1NDG8 as seed ortholog is 100%.

Group of orthologs #4892. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 G.gallus:68

F7B7C2              	100.00%		E1C0H2              	100.00%
                    	       		F1P5B9              	6.07%
Bootstrap support for F7B7C2 as seed ortholog is 100%.
Bootstrap support for E1C0H2 as seed ortholog is 100%.

Group of orthologs #4893. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 G.gallus:68

F6QHF4              	100.00%		E1C847              	100.00%
Bootstrap support for F6QHF4 as seed ortholog is 100%.
Bootstrap support for E1C847 as seed ortholog is 100%.

Group of orthologs #4894. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 G.gallus:27

F6PJW3              	100.00%		H9KYY0              	100.00%
Bootstrap support for F6PJW3 as seed ortholog is 60%.
Alternative seed ortholog is F6Y6J1 (6 bits away from this cluster)
Bootstrap support for H9KYY0 as seed ortholog is 87%.

Group of orthologs #4895. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 G.gallus:68

H2XVM2              	100.00%		E1BUC7              	100.00%
Bootstrap support for H2XVM2 as seed ortholog is 100%.
Bootstrap support for E1BUC7 as seed ortholog is 100%.

Group of orthologs #4896. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 G.gallus:68

F6XCN2              	100.00%		H9L139              	100.00%
Bootstrap support for F6XCN2 as seed ortholog is 100%.
Bootstrap support for H9L139 as seed ortholog is 100%.

Group of orthologs #4897. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 G.gallus:68

H2Y0F9              	100.00%		P0DJH7              	100.00%
Bootstrap support for H2Y0F9 as seed ortholog is 100%.
Bootstrap support for P0DJH7 as seed ortholog is 100%.

Group of orthologs #4898. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 G.gallus:67

F6YYJ3              	100.00%		F1NX90              	100.00%
L7N0Q4              	30.61%		F1NUG5              	41.20%
F6ZX95              	29.09%		
F6ZX85              	23.83%		
F6WF03              	21.26%		
H2XTP7              	20.56%		
F6WPE0              	15.07%		
H2XX88              	13.90%		
F6QEF4              	9.70%		
F6ZAV7              	9.58%		
F6WFF2              	8.41%		
F6TYQ6              	6.19%		
H2XP25              	5.84%		
Bootstrap support for F6YYJ3 as seed ortholog is 100%.
Bootstrap support for F1NX90 as seed ortholog is 100%.

Group of orthologs #4899. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 G.gallus:67

H2XXU6              	100.00%		G1K364              	100.00%
                    	       		P31258              	100.00%
                    	       		H9L0A6              	44.65%
                    	       		P24342              	40.81%
                    	       		H9KZT9              	9.04%
Bootstrap support for H2XXU6 as seed ortholog is 100%.
Bootstrap support for G1K364 as seed ortholog is 100%.
Bootstrap support for P31258 as seed ortholog is 100%.

Group of orthologs #4900. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 G.gallus:67

H2XL17              	100.00%		F1P207              	100.00%
                    	       		F1N8P4              	38.74%
Bootstrap support for H2XL17 as seed ortholog is 100%.
Bootstrap support for F1P207 as seed ortholog is 100%.

Group of orthologs #4901. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 G.gallus:67

F6YRB7              	100.00%		E1BVU1              	100.00%
Bootstrap support for F6YRB7 as seed ortholog is 100%.
Bootstrap support for E1BVU1 as seed ortholog is 100%.

Group of orthologs #4902. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 G.gallus:67

F6SAZ7              	100.00%		F1NMJ5              	100.00%
Bootstrap support for F6SAZ7 as seed ortholog is 78%.
Bootstrap support for F1NMJ5 as seed ortholog is 100%.

Group of orthologs #4903. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 G.gallus:67

H2XQ44              	100.00%		E1C316              	100.00%
Bootstrap support for H2XQ44 as seed ortholog is 100%.
Bootstrap support for E1C316 as seed ortholog is 100%.

Group of orthologs #4904. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 G.gallus:67

F6XN50              	100.00%		F1P030              	100.00%
Bootstrap support for F6XN50 as seed ortholog is 100%.
Bootstrap support for F1P030 as seed ortholog is 100%.

Group of orthologs #4905. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 G.gallus:23

F6XHU3              	100.00%		F1N8D1              	100.00%
Bootstrap support for F6XHU3 as seed ortholog is 100%.
Bootstrap support for F1N8D1 as seed ortholog is 93%.

Group of orthologs #4906. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 G.gallus:66

H2XPF2              	100.00%		E1BQA6              	100.00%
Bootstrap support for H2XPF2 as seed ortholog is 100%.
Bootstrap support for E1BQA6 as seed ortholog is 100%.

Group of orthologs #4907. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 G.gallus:66

F6QCG4              	100.00%		Q5G8Y9              	100.00%
Bootstrap support for F6QCG4 as seed ortholog is 100%.
Bootstrap support for Q5G8Y9 as seed ortholog is 100%.

Group of orthologs #4908. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 G.gallus:66

H2XWY3              	100.00%		E1C4V7              	100.00%
Bootstrap support for H2XWY3 as seed ortholog is 100%.
Bootstrap support for E1C4V7 as seed ortholog is 100%.

Group of orthologs #4909. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 G.gallus:65

F6QRK3              	100.00%		E1BVE8              	100.00%
                    	       		Q5D212              	46.36%
                    	       		E1BVD7              	43.30%
Bootstrap support for F6QRK3 as seed ortholog is 100%.
Bootstrap support for E1BVE8 as seed ortholog is 100%.

Group of orthologs #4910. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 G.gallus:65

F6SKT1              	100.00%		Q90X25              	100.00%
                    	       		P24344              	35.99%
                    	       		H9KZR8              	35.62%
Bootstrap support for F6SKT1 as seed ortholog is 100%.
Bootstrap support for Q90X25 as seed ortholog is 100%.

Group of orthologs #4911. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 G.gallus:65

F7ACP0              	100.00%		F1NHL5              	100.00%
F6Z4Q2              	59.93%		
Bootstrap support for F7ACP0 as seed ortholog is 57%.
Alternative seed ortholog is F6YUM8 (5 bits away from this cluster)
Bootstrap support for F1NHL5 as seed ortholog is 100%.

Group of orthologs #4912. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 G.gallus:65

F6QPK2              	100.00%		E1C418              	100.00%
Bootstrap support for F6QPK2 as seed ortholog is 49%.
Alternative seed ortholog is F6SXL4 (1 bits away from this cluster)
Bootstrap support for E1C418 as seed ortholog is 100%.

Group of orthologs #4913. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 G.gallus:65

F6WHK6              	100.00%		E1BQN0              	100.00%
Bootstrap support for F6WHK6 as seed ortholog is 100%.
Bootstrap support for E1BQN0 as seed ortholog is 100%.

Group of orthologs #4914. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 G.gallus:65

H2XKH1              	100.00%		F1NMY7              	100.00%
Bootstrap support for H2XKH1 as seed ortholog is 100%.
Bootstrap support for F1NMY7 as seed ortholog is 100%.

Group of orthologs #4915. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 G.gallus:65

H2XYZ9              	100.00%		E1C6X7              	100.00%
Bootstrap support for H2XYZ9 as seed ortholog is 100%.
Bootstrap support for E1C6X7 as seed ortholog is 100%.

Group of orthologs #4916. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 G.gallus:65

H2XZT3              	100.00%		E1C701              	100.00%
Bootstrap support for H2XZT3 as seed ortholog is 100%.
Bootstrap support for E1C701 as seed ortholog is 100%.

Group of orthologs #4917. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 G.gallus:64

F6QY33              	100.00%		F1NT88              	100.00%
                    	       		F1NYY7              	25.19%
Bootstrap support for F6QY33 as seed ortholog is 100%.
Bootstrap support for F1NT88 as seed ortholog is 100%.

Group of orthologs #4918. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 G.gallus:64

F7BNR7              	100.00%		F1NR63              	100.00%
                    	       		F1NMV0              	15.75%
Bootstrap support for F7BNR7 as seed ortholog is 100%.
Bootstrap support for F1NR63 as seed ortholog is 100%.

Group of orthologs #4919. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 G.gallus:64

F6ZNE0              	100.00%		E1C432              	100.00%
Bootstrap support for F6ZNE0 as seed ortholog is 100%.
Bootstrap support for E1C432 as seed ortholog is 100%.

Group of orthologs #4920. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 G.gallus:64

H2XVU9              	100.00%		E1C745              	100.00%
Bootstrap support for H2XVU9 as seed ortholog is 100%.
Bootstrap support for E1C745 as seed ortholog is 100%.

Group of orthologs #4921. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 G.gallus:64

H2XRG9              	100.00%		F1NCP6              	100.00%
Bootstrap support for H2XRG9 as seed ortholog is 100%.
Bootstrap support for F1NCP6 as seed ortholog is 100%.

Group of orthologs #4922. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 G.gallus:64

F6ZT56              	100.00%		H9L1D3              	100.00%
Bootstrap support for F6ZT56 as seed ortholog is 100%.
Bootstrap support for H9L1D3 as seed ortholog is 100%.

Group of orthologs #4923. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 G.gallus:64

H2Y251              	100.00%		F1NZ73              	100.00%
Bootstrap support for H2Y251 as seed ortholog is 50%.
Alternative seed ortholog is F6ZR39 (2 bits away from this cluster)
Bootstrap support for F1NZ73 as seed ortholog is 100%.

Group of orthologs #4924. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 G.gallus:63

F6ZSL9              	100.00%		E1C9C0              	100.00%
F6WLI7              	36.80%		
H2XN03              	35.20%		
H2Y2E0              	34.67%		
F6W615              	33.87%		
F6SJ97              	31.20%		
Bootstrap support for F6ZSL9 as seed ortholog is 100%.
Bootstrap support for E1C9C0 as seed ortholog is 100%.

Group of orthologs #4925. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 G.gallus:7

Q1RLH3              	100.00%		E1BWE8              	100.00%
                    	       		E1BUP0              	62.55%
Bootstrap support for Q1RLH3 as seed ortholog is 100%.
Bootstrap support for E1BWE8 as seed ortholog is 57%.
Alternative seed ortholog is F1NAJ7 (7 bits away from this cluster)

Group of orthologs #4926. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 G.gallus:63

F6U3H6              	100.00%		Q90876              	100.00%
                    	       		Q98925              	27.66%
Bootstrap support for F6U3H6 as seed ortholog is 100%.
Bootstrap support for Q90876 as seed ortholog is 100%.

Group of orthologs #4927. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 G.gallus:63

H2XTU2              	100.00%		F1NZV0              	100.00%
                    	       		Q90665              	21.10%
Bootstrap support for H2XTU2 as seed ortholog is 100%.
Bootstrap support for F1NZV0 as seed ortholog is 100%.

Group of orthologs #4928. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 G.gallus:63

F6PWA8              	100.00%		E1C887              	100.00%
Bootstrap support for F6PWA8 as seed ortholog is 100%.
Bootstrap support for E1C887 as seed ortholog is 100%.

Group of orthologs #4929. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 G.gallus:63

F6SC91              	100.00%		F1NEH6              	100.00%
Bootstrap support for F6SC91 as seed ortholog is 100%.
Bootstrap support for F1NEH6 as seed ortholog is 100%.

Group of orthologs #4930. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 G.gallus:63

F6U4Y8              	100.00%		F1NN35              	100.00%
Bootstrap support for F6U4Y8 as seed ortholog is 100%.
Bootstrap support for F1NN35 as seed ortholog is 100%.

Group of orthologs #4931. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 G.gallus:13

Q4H3C9              	100.00%		F1NF72              	100.00%
Bootstrap support for Q4H3C9 as seed ortholog is 44%.
Alternative seed ortholog is F6VM66 (2 bits away from this cluster)
Bootstrap support for F1NF72 as seed ortholog is 84%.

Group of orthologs #4932. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 G.gallus:62

F6UKH7              	100.00%		F1NUK4              	100.00%
                    	       		O42148              	100.00%
                    	       		E1C9J8              	42.54%
Bootstrap support for F6UKH7 as seed ortholog is 100%.
Bootstrap support for F1NUK4 as seed ortholog is 100%.
Bootstrap support for O42148 as seed ortholog is 100%.

Group of orthologs #4933. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 G.gallus:62

H2XZ03              	100.00%		F1NQC4              	100.00%
                    	       		F1NUD9              	8.31%
Bootstrap support for H2XZ03 as seed ortholog is 100%.
Bootstrap support for F1NQC4 as seed ortholog is 100%.

Group of orthologs #4934. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 G.gallus:62

H2XUR3              	100.00%		P18359              	100.00%
                    	       		P21566              	64.60%
Bootstrap support for H2XUR3 as seed ortholog is 100%.
Bootstrap support for P18359 as seed ortholog is 100%.

Group of orthologs #4935. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 G.gallus:62

F7B1S6              	100.00%		E1C9H4              	100.00%
Bootstrap support for F7B1S6 as seed ortholog is 100%.
Bootstrap support for E1C9H4 as seed ortholog is 100%.

Group of orthologs #4936. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 G.gallus:62

H2XZJ1              	100.00%		E1BQU3              	100.00%
Bootstrap support for H2XZJ1 as seed ortholog is 100%.
Bootstrap support for E1BQU3 as seed ortholog is 100%.

Group of orthologs #4937. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 G.gallus:62

H2XMT5              	100.00%		F1N828              	100.00%
Bootstrap support for H2XMT5 as seed ortholog is 100%.
Bootstrap support for F1N828 as seed ortholog is 100%.

Group of orthologs #4938. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 G.gallus:62

H2Y1I9              	100.00%		E1BY33              	100.00%
Bootstrap support for H2Y1I9 as seed ortholog is 89%.
Bootstrap support for E1BY33 as seed ortholog is 100%.

Group of orthologs #4939. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 G.gallus:62

H2XXL9              	100.00%		E1C953              	100.00%
Bootstrap support for H2XXL9 as seed ortholog is 100%.
Bootstrap support for E1C953 as seed ortholog is 100%.

Group of orthologs #4940. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 G.gallus:62

H2XXK2              	100.00%		F1P2A1              	100.00%
Bootstrap support for H2XXK2 as seed ortholog is 100%.
Bootstrap support for F1P2A1 as seed ortholog is 100%.

Group of orthologs #4941. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 G.gallus:61

F6ZJ69              	100.00%		E1C1P1              	100.00%
                    	       		H9KZV7              	8.09%
Bootstrap support for F6ZJ69 as seed ortholog is 100%.
Bootstrap support for E1C1P1 as seed ortholog is 100%.

Group of orthologs #4942. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 G.gallus:4

F6U8Q2              	100.00%		F1NMI5              	100.00%
                    	       		E1BXL3              	6.02%
Bootstrap support for F6U8Q2 as seed ortholog is 100%.
Bootstrap support for F1NMI5 as seed ortholog is 59%.
Alternative seed ortholog is O57598 (4 bits away from this cluster)

Group of orthologs #4943. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 G.gallus:61

H2XQR3              	100.00%		Q5ZJ03              	100.00%
                    	       		E1BS32              	62.96%
Bootstrap support for H2XQR3 as seed ortholog is 100%.
Bootstrap support for Q5ZJ03 as seed ortholog is 100%.

Group of orthologs #4944. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 G.gallus:61

F6PNZ0              	100.00%		E1BXK8              	100.00%
Bootstrap support for F6PNZ0 as seed ortholog is 100%.
Bootstrap support for E1BXK8 as seed ortholog is 100%.

Group of orthologs #4945. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 G.gallus:61

F6S8H0              	100.00%		F1NI88              	100.00%
Bootstrap support for F6S8H0 as seed ortholog is 100%.
Bootstrap support for F1NI88 as seed ortholog is 100%.

Group of orthologs #4946. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 G.gallus:61

H2XUZ9              	100.00%		E1BQW3              	100.00%
Bootstrap support for H2XUZ9 as seed ortholog is 100%.
Bootstrap support for E1BQW3 as seed ortholog is 100%.

Group of orthologs #4947. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 G.gallus:61

F6XE89              	100.00%		F1NS21              	100.00%
Bootstrap support for F6XE89 as seed ortholog is 100%.
Bootstrap support for F1NS21 as seed ortholog is 100%.

Group of orthologs #4948. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 G.gallus:61

F6ZJN0              	100.00%		Q5F3I3              	100.00%
Bootstrap support for F6ZJN0 as seed ortholog is 100%.
Bootstrap support for Q5F3I3 as seed ortholog is 100%.

Group of orthologs #4949. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 G.gallus:60

F7A367              	100.00%		F1NF43              	100.00%
F6ZKU9              	100.00%		F1NCV2              	100.00%
F6WSS9              	8.14%		P02197              	14.60%
                    	       		P02001              	11.68%
                    	       		P02007              	10.84%
                    	       		P01994              	9.49%
                    	       		P02112              	9.12%
                    	       		P02128              	8.76%
                    	       		F1NEY9              	8.76%
Bootstrap support for F7A367 as seed ortholog is 100%.
Bootstrap support for F6ZKU9 as seed ortholog is 100%.
Bootstrap support for F1NF43 as seed ortholog is 100%.
Bootstrap support for F1NCV2 as seed ortholog is 100%.

Group of orthologs #4950. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 G.gallus:60

F6R5A5              	100.00%		E1C308              	100.00%
Bootstrap support for F6R5A5 as seed ortholog is 100%.
Bootstrap support for E1C308 as seed ortholog is 100%.

Group of orthologs #4951. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 G.gallus:60

F6XYL2              	100.00%		E1BXY7              	100.00%
Bootstrap support for F6XYL2 as seed ortholog is 100%.
Bootstrap support for E1BXY7 as seed ortholog is 100%.

Group of orthologs #4952. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 G.gallus:60

F6YWN2              	100.00%		E1C645              	100.00%
Bootstrap support for F6YWN2 as seed ortholog is 100%.
Bootstrap support for E1C645 as seed ortholog is 100%.

Group of orthologs #4953. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 G.gallus:60

F6T4C7              	100.00%		F1P0N9              	100.00%
Bootstrap support for F6T4C7 as seed ortholog is 100%.
Bootstrap support for F1P0N9 as seed ortholog is 100%.

Group of orthologs #4954. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 G.gallus:60

F6X197              	100.00%		F1NTV7              	100.00%
Bootstrap support for F6X197 as seed ortholog is 100%.
Bootstrap support for F1NTV7 as seed ortholog is 100%.

Group of orthologs #4955. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 G.gallus:60

H2XWA7              	100.00%		E1BY34              	100.00%
Bootstrap support for H2XWA7 as seed ortholog is 100%.
Bootstrap support for E1BY34 as seed ortholog is 100%.

Group of orthologs #4956. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 G.gallus:60

F6Y820              	100.00%		F1NVK0              	100.00%
Bootstrap support for F6Y820 as seed ortholog is 100%.
Bootstrap support for F1NVK0 as seed ortholog is 100%.

Group of orthologs #4957. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:59

F6U121              	100.00%		F1NAU3              	100.00%
                    	       		Q9I9J6              	97.56%
Bootstrap support for F6U121 as seed ortholog is 100%.
Bootstrap support for F1NAU3 as seed ortholog is 100%.

Group of orthologs #4958. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:59

F6QEG3              	100.00%		E1BYL2              	100.00%
Bootstrap support for F6QEG3 as seed ortholog is 100%.
Bootstrap support for E1BYL2 as seed ortholog is 100%.

Group of orthologs #4959. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:59

F6S788              	100.00%		E1BZ60              	100.00%
Bootstrap support for F6S788 as seed ortholog is 100%.
Bootstrap support for E1BZ60 as seed ortholog is 100%.

Group of orthologs #4960. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:59

F6ZYD2              	100.00%		E1C127              	100.00%
Bootstrap support for F6ZYD2 as seed ortholog is 100%.
Bootstrap support for E1C127 as seed ortholog is 100%.

Group of orthologs #4961. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:59

F6UIJ8              	100.00%		F1NIG5              	100.00%
Bootstrap support for F6UIJ8 as seed ortholog is 100%.
Bootstrap support for F1NIG5 as seed ortholog is 100%.

Group of orthologs #4962. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:59

F7BMF5              	100.00%		E1BXS0              	100.00%
Bootstrap support for F7BMF5 as seed ortholog is 100%.
Bootstrap support for E1BXS0 as seed ortholog is 100%.

Group of orthologs #4963. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:59

F6XU45              	100.00%		H9L0C7              	100.00%
Bootstrap support for F6XU45 as seed ortholog is 100%.
Bootstrap support for H9L0C7 as seed ortholog is 100%.

Group of orthologs #4964. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 G.gallus:59

H2XTI8              	100.00%		F1NIC5              	100.00%
Bootstrap support for H2XTI8 as seed ortholog is 78%.
Bootstrap support for F1NIC5 as seed ortholog is 100%.

Group of orthologs #4965. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:59

H2XY84              	100.00%		F1NUW0              	100.00%
Bootstrap support for H2XY84 as seed ortholog is 100%.
Bootstrap support for F1NUW0 as seed ortholog is 100%.

Group of orthologs #4966. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 G.gallus:59

H2XPU3              	100.00%		Q5ZKG5              	100.00%
Bootstrap support for H2XPU3 as seed ortholog is 100%.
Bootstrap support for Q5ZKG5 as seed ortholog is 100%.

Group of orthologs #4967. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:0 G.gallus:5

F6Y7H2              	100.00%		F1P2Z5              	100.00%
H2XQ43              	21.93%		
L7N0Q2              	10.30%		
Bootstrap support for F6Y7H2 as seed ortholog is 52%.
Alternative seed ortholog is H2XRM8 (0 bits away from this cluster)
Bootstrap support for F1P2Z5 as seed ortholog is 56%.
Alternative seed ortholog is F1NK21 (5 bits away from this cluster)

Group of orthologs #4968. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 G.gallus:57

F6QKP0              	100.00%		F1N891              	100.00%
                    	       		F1NUK9              	7.31%
Bootstrap support for F6QKP0 as seed ortholog is 100%.
Bootstrap support for F1N891 as seed ortholog is 100%.

Group of orthologs #4969. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 G.gallus:57

F6QLP3              	100.00%		E1BZG0              	100.00%
Bootstrap support for F6QLP3 as seed ortholog is 100%.
Bootstrap support for E1BZG0 as seed ortholog is 100%.

Group of orthologs #4970. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 G.gallus:57

H2Y0S8              	100.00%		E1C7G3              	100.00%
Bootstrap support for H2Y0S8 as seed ortholog is 100%.
Bootstrap support for E1C7G3 as seed ortholog is 100%.

Group of orthologs #4971. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 G.gallus:57

H2XLE9              	100.00%		F1NZA3              	100.00%
Bootstrap support for H2XLE9 as seed ortholog is 100%.
Bootstrap support for F1NZA3 as seed ortholog is 100%.

Group of orthologs #4972. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 G.gallus:57

H2XN70              	100.00%		Q5ZLJ4              	100.00%
Bootstrap support for H2XN70 as seed ortholog is 100%.
Bootstrap support for Q5ZLJ4 as seed ortholog is 100%.

Group of orthologs #4973. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 G.gallus:56

F6X612              	100.00%		E1BVQ0              	100.00%
F6X638              	58.84%		F1NZN2              	33.58%
F6ZKF6              	51.29%		
H2XZ13              	27.37%		
F6VLY9              	26.94%		
F7BFN9              	21.77%		
F6SJ11              	15.30%		
F6T9R9              	14.22%		
H2XWX7              	7.97%		
F6XP13              	6.90%		
F6PRB0              	6.68%		
H2XUR5              	6.47%		
Bootstrap support for F6X612 as seed ortholog is 100%.
Bootstrap support for E1BVQ0 as seed ortholog is 100%.

Group of orthologs #4974. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 G.gallus:56

F6RAF6              	100.00%		E1BZI3              	100.00%
F6STM2              	100.00%		Q2LK96              	100.00%
F6VHD2              	89.57%		Q90XB2              	33.43%
F6VE25              	66.91%		
Bootstrap support for F6RAF6 as seed ortholog is 100%.
Bootstrap support for F6STM2 as seed ortholog is 100%.
Bootstrap support for E1BZI3 as seed ortholog is 100%.
Bootstrap support for Q2LK96 as seed ortholog is 100%.

Group of orthologs #4975. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 G.gallus:56

F6ZL37              	100.00%		Q5ZK43              	100.00%
                    	       		F1NTY6              	41.50%
Bootstrap support for F6ZL37 as seed ortholog is 100%.
Bootstrap support for Q5ZK43 as seed ortholog is 100%.

Group of orthologs #4976. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 G.gallus:56

H2Y0B0              	100.00%		F1NPV1              	100.00%
                    	       		Q9I946              	36.15%
Bootstrap support for H2Y0B0 as seed ortholog is 100%.
Bootstrap support for F1NPV1 as seed ortholog is 100%.

Group of orthologs #4977. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 G.gallus:56

F6XPI8              	100.00%		E1BU75              	100.00%
Bootstrap support for F6XPI8 as seed ortholog is 100%.
Bootstrap support for E1BU75 as seed ortholog is 100%.

Group of orthologs #4978. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 G.gallus:56

F6ZLG3              	100.00%		E1BY82              	100.00%
Bootstrap support for F6ZLG3 as seed ortholog is 100%.
Bootstrap support for E1BY82 as seed ortholog is 100%.

Group of orthologs #4979. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 G.gallus:56

F6PLL1              	100.00%		H9L153              	100.00%
Bootstrap support for F6PLL1 as seed ortholog is 100%.
Bootstrap support for H9L153 as seed ortholog is 100%.

Group of orthologs #4980. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 G.gallus:56

H2Y286              	100.00%		E1BVM0              	100.00%
Bootstrap support for H2Y286 as seed ortholog is 100%.
Bootstrap support for E1BVM0 as seed ortholog is 100%.

Group of orthologs #4981. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 G.gallus:56

H2XYX0              	100.00%		E1C3B2              	100.00%
Bootstrap support for H2XYX0 as seed ortholog is 100%.
Bootstrap support for E1C3B2 as seed ortholog is 100%.

Group of orthologs #4982. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 G.gallus:56

H2Y261              	100.00%		F1NVK6              	100.00%
Bootstrap support for H2Y261 as seed ortholog is 100%.
Bootstrap support for F1NVK6 as seed ortholog is 100%.

Group of orthologs #4983. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 G.gallus:55

H2XPC3              	100.00%		E1BZ31              	100.00%
H2XKW3              	12.13%		
H2XLF7              	7.21%		
Bootstrap support for H2XPC3 as seed ortholog is 100%.
Bootstrap support for E1BZ31 as seed ortholog is 100%.

Group of orthologs #4984. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 G.gallus:55

F6SWF0              	100.00%		F1P3T3              	100.00%
                    	       		Q9PTD5              	8.90%
                    	       		E1BWR2              	7.93%
Bootstrap support for F6SWF0 as seed ortholog is 100%.
Bootstrap support for F1P3T3 as seed ortholog is 100%.

Group of orthologs #4985. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 G.gallus:55

H2Y2M8              	100.00%		E1C7N7              	100.00%
                    	       		F1N905              	54.82%
Bootstrap support for H2Y2M8 as seed ortholog is 100%.
Bootstrap support for E1C7N7 as seed ortholog is 100%.

Group of orthologs #4986. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 G.gallus:55

F6TGA7              	100.00%		E1BU10              	100.00%
Bootstrap support for F6TGA7 as seed ortholog is 100%.
Bootstrap support for E1BU10 as seed ortholog is 100%.

Group of orthologs #4987. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 G.gallus:55

H2XKP2              	100.00%		F1NRX4              	100.00%
Bootstrap support for H2XKP2 as seed ortholog is 100%.
Bootstrap support for F1NRX4 as seed ortholog is 100%.

Group of orthologs #4988. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 G.gallus:55

F6V259              	100.00%		Q9DDD4              	100.00%
Bootstrap support for F6V259 as seed ortholog is 100%.
Bootstrap support for Q9DDD4 as seed ortholog is 100%.

Group of orthologs #4989. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 G.gallus:1

F6YVN3              	100.00%		Q9W6F2              	100.00%
Bootstrap support for F6YVN3 as seed ortholog is 100%.
Bootstrap support for Q9W6F2 as seed ortholog is 52%.
Alternative seed ortholog is Q5F404 (1 bits away from this cluster)

Group of orthologs #4990. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 G.gallus:54

F6UV70              	100.00%		H9L037              	100.00%
F6UZH2              	5.00%		F1NDZ2              	52.55%
Bootstrap support for F6UV70 as seed ortholog is 100%.
Bootstrap support for H9L037 as seed ortholog is 100%.

Group of orthologs #4991. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 G.gallus:54

F6XJ64              	100.00%		E1C4Q4              	100.00%
                    	       		Q5ZIU1              	5.32%
Bootstrap support for F6XJ64 as seed ortholog is 100%.
Bootstrap support for E1C4Q4 as seed ortholog is 100%.

Group of orthologs #4992. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 G.gallus:54

H2XXW5              	100.00%		E1BTJ3              	100.00%
                    	       		E1C0C1              	100.00%
Bootstrap support for H2XXW5 as seed ortholog is 100%.
Bootstrap support for E1BTJ3 as seed ortholog is 100%.
Bootstrap support for E1C0C1 as seed ortholog is 100%.

Group of orthologs #4993. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 G.gallus:54

H2XXC8              	100.00%		F1NUC5              	100.00%
                    	       		E1BQU5              	50.60%
Bootstrap support for H2XXC8 as seed ortholog is 100%.
Bootstrap support for F1NUC5 as seed ortholog is 100%.

Group of orthologs #4994. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 G.gallus:54

F6Y5E2              	100.00%		E1C4Q1              	100.00%
Bootstrap support for F6Y5E2 as seed ortholog is 100%.
Bootstrap support for E1C4Q1 as seed ortholog is 100%.

Group of orthologs #4995. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 G.gallus:54

F6WSN8              	100.00%		Q1T7B9              	100.00%
Bootstrap support for F6WSN8 as seed ortholog is 100%.
Bootstrap support for Q1T7B9 as seed ortholog is 100%.

Group of orthologs #4996. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 G.gallus:54

H2XRR5              	100.00%		F1NPL1              	100.00%
Bootstrap support for H2XRR5 as seed ortholog is 100%.
Bootstrap support for F1NPL1 as seed ortholog is 100%.

Group of orthologs #4997. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 G.gallus:54

Q69HP7              	100.00%		H9L048              	100.00%
Bootstrap support for Q69HP7 as seed ortholog is 100%.
Bootstrap support for H9L048 as seed ortholog is 100%.

Group of orthologs #4998. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 G.gallus:54

Q4H2Z7              	100.00%		H9L3K8              	100.00%
Bootstrap support for Q4H2Z7 as seed ortholog is 63%.
Alternative seed ortholog is H2XYR5 (4 bits away from this cluster)
Bootstrap support for H9L3K8 as seed ortholog is 100%.

Group of orthologs #4999. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 G.gallus:53

H2XVH7              	100.00%		Q155F6              	100.00%
H2XXG2              	12.66%		
Bootstrap support for H2XVH7 as seed ortholog is 100%.
Bootstrap support for Q155F6 as seed ortholog is 100%.

Group of orthologs #5000. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 G.gallus:52

F6Q119              	100.00%		Q5QSB1              	100.00%
Bootstrap support for F6Q119 as seed ortholog is 100%.
Bootstrap support for Q5QSB1 as seed ortholog is 100%.

Group of orthologs #5001. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 G.gallus:52

H2XQT1              	100.00%		H9L124              	100.00%
Bootstrap support for H2XQT1 as seed ortholog is 100%.
Bootstrap support for H9L124 as seed ortholog is 100%.

Group of orthologs #5002. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 G.gallus:52

H2XM88              	100.00%		Q5ZK14              	100.00%
Bootstrap support for H2XM88 as seed ortholog is 100%.
Bootstrap support for Q5ZK14 as seed ortholog is 100%.

Group of orthologs #5003. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 G.gallus:52

Q8HIN1              	100.00%		P18938              	100.00%
Bootstrap support for Q8HIN1 as seed ortholog is 100%.
Bootstrap support for P18938 as seed ortholog is 100%.

Group of orthologs #5004. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 G.gallus:1

F6R5R8              	100.00%		E1C108              	100.00%
                    	       		E1BZ46              	32.51%
                    	       		E1BZ34              	28.62%
Bootstrap support for F6R5R8 as seed ortholog is 100%.
Bootstrap support for E1C108 as seed ortholog is 48%.
Alternative seed ortholog is E1C4A6 (1 bits away from this cluster)

Group of orthologs #5005. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 G.gallus:51

F6S3X8              	100.00%		E1C7W2              	100.00%
                    	       		F1NW56              	13.65%
Bootstrap support for F6S3X8 as seed ortholog is 100%.
Bootstrap support for E1C7W2 as seed ortholog is 100%.

Group of orthologs #5006. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 G.gallus:51

H2XMW9              	100.00%		H9KZ34              	100.00%
F6PKR4              	9.52%		
Bootstrap support for H2XMW9 as seed ortholog is 100%.
Bootstrap support for H9KZ34 as seed ortholog is 100%.

Group of orthologs #5007. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 G.gallus:51

F6Q301              	100.00%		F1N8Y0              	100.00%
Bootstrap support for F6Q301 as seed ortholog is 100%.
Bootstrap support for F1N8Y0 as seed ortholog is 100%.

Group of orthologs #5008. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 G.gallus:51

F7AIY7              	100.00%		E1C813              	100.00%
Bootstrap support for F7AIY7 as seed ortholog is 100%.
Bootstrap support for E1C813 as seed ortholog is 100%.

Group of orthologs #5009. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 G.gallus:51

H2XWM7              	100.00%		Q5ZIR8              	100.00%
Bootstrap support for H2XWM7 as seed ortholog is 100%.
Bootstrap support for Q5ZIR8 as seed ortholog is 100%.

Group of orthologs #5010. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 G.gallus:50

F6Z4J5              	100.00%		E1C5D0              	100.00%
F6Z4P5              	15.26%		
F6XAV8              	13.68%		
F6Z4L4              	8.42%		
Bootstrap support for F6Z4J5 as seed ortholog is 46%.
Alternative seed ortholog is H2XKB2 (4 bits away from this cluster)
Bootstrap support for E1C5D0 as seed ortholog is 100%.

Group of orthologs #5011. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 G.gallus:50

H2XWK3              	100.00%		F1P113              	100.00%
                    	       		F1NBH5              	35.28%
                    	       		F1NBH3              	33.74%
                    	       		F1NU72              	25.46%
Bootstrap support for H2XWK3 as seed ortholog is 100%.
Bootstrap support for F1P113 as seed ortholog is 100%.

Group of orthologs #5012. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 G.gallus:50

F6TYJ4              	100.00%		E1C8P4              	100.00%
                    	       		F1P544              	22.53%
                    	       		F1NFN9              	5.04%
Bootstrap support for F6TYJ4 as seed ortholog is 100%.
Bootstrap support for E1C8P4 as seed ortholog is 100%.

Group of orthologs #5013. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 G.gallus:50

F6YWM5              	100.00%		E1C2X2              	100.00%
Bootstrap support for F6YWM5 as seed ortholog is 67%.
Alternative seed ortholog is H2XYR5 (6 bits away from this cluster)
Bootstrap support for E1C2X2 as seed ortholog is 100%.

Group of orthologs #5014. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 G.gallus:50

H2XNI5              	100.00%		E1BZM7              	100.00%
Bootstrap support for H2XNI5 as seed ortholog is 100%.
Bootstrap support for E1BZM7 as seed ortholog is 100%.

Group of orthologs #5015. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 G.gallus:50

H2XP47              	100.00%		E1C795              	100.00%
Bootstrap support for H2XP47 as seed ortholog is 100%.
Bootstrap support for E1C795 as seed ortholog is 100%.

Group of orthologs #5016. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 G.gallus:49

F6UHK4              	100.00%		F1N836              	100.00%
                    	       		H9KZ33              	100.00%
                    	       		F1NYD3              	90.84%
                    	       		H9L0H4              	89.62%
                    	       		H9L0L2              	80.92%
                    	       		H9KZN5              	66.33%
                    	       		F1P3S1              	56.23%
                    	       		H9L091              	47.59%
                    	       		H9KZA8              	42.28%
                    	       		H9KZV1              	37.47%
Bootstrap support for F6UHK4 as seed ortholog is 100%.
Bootstrap support for F1N836 as seed ortholog is 100%.
Bootstrap support for H9KZ33 as seed ortholog is 100%.

Group of orthologs #5017. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 G.gallus:49

F6S8G5              	100.00%		E1C3Z2              	100.00%
Bootstrap support for F6S8G5 as seed ortholog is 100%.
Bootstrap support for E1C3Z2 as seed ortholog is 100%.

Group of orthologs #5018. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 G.gallus:49

F7APR6              	100.00%		E1C7D9              	100.00%
Bootstrap support for F7APR6 as seed ortholog is 100%.
Bootstrap support for E1C7D9 as seed ortholog is 100%.

Group of orthologs #5019. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 G.gallus:48

F6Y4C9              	100.00%		Q5CAQ0              	100.00%
                    	       		H9L1M7              	48.08%
Bootstrap support for F6Y4C9 as seed ortholog is 100%.
Bootstrap support for Q5CAQ0 as seed ortholog is 100%.

Group of orthologs #5020. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 G.gallus:48

Q6L5M6              	100.00%		F1N936              	100.00%
Q6L5M5              	12.88%		
Bootstrap support for Q6L5M6 as seed ortholog is 100%.
Bootstrap support for F1N936 as seed ortholog is 100%.

Group of orthologs #5021. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 G.gallus:48

F6S720              	100.00%		F1NWW6              	100.00%
Bootstrap support for F6S720 as seed ortholog is 100%.
Bootstrap support for F1NWW6 as seed ortholog is 100%.

Group of orthologs #5022. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 G.gallus:47

F6PNT4              	100.00%		F1P464              	100.00%
F6PNS0              	41.21%		F1P472              	49.65%
Bootstrap support for F6PNT4 as seed ortholog is 100%.
Bootstrap support for F1P464 as seed ortholog is 100%.

Group of orthologs #5023. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 G.gallus:47

H2XVR4              	100.00%		Q5ZKB8              	100.00%
Bootstrap support for H2XVR4 as seed ortholog is 100%.
Bootstrap support for Q5ZKB8 as seed ortholog is 100%.

Group of orthologs #5024. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 G.gallus:46

F6Y1D4              	100.00%		E1BY54              	100.00%
                    	       		E1BYR3              	42.59%
                    	       		F1NDY4              	20.75%
Bootstrap support for F6Y1D4 as seed ortholog is 100%.
Bootstrap support for E1BY54 as seed ortholog is 100%.

Group of orthologs #5025. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 G.gallus:46

F6ZW81              	100.00%		F1NC39              	100.00%
Bootstrap support for F6ZW81 as seed ortholog is 100%.
Bootstrap support for F1NC39 as seed ortholog is 100%.

Group of orthologs #5026. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 G.gallus:46

F6YVG2              	100.00%		F1NX84              	100.00%
Bootstrap support for F6YVG2 as seed ortholog is 100%.
Bootstrap support for F1NX84 as seed ortholog is 100%.

Group of orthologs #5027. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 G.gallus:46

H2Y0G5              	100.00%		E1C433              	100.00%
Bootstrap support for H2Y0G5 as seed ortholog is 100%.
Bootstrap support for E1C433 as seed ortholog is 100%.

Group of orthologs #5028. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 G.gallus:45

H2XZ15              	100.00%		H9L3T4              	100.00%
                    	       		H9L3S4              	36.16%
                    	       		F1ND47              	15.63%
                    	       		A5HUK1              	14.12%
                    	       		H9KZL4              	9.04%
Bootstrap support for H2XZ15 as seed ortholog is 100%.
Bootstrap support for H9L3T4 as seed ortholog is 100%.

Group of orthologs #5029. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 G.gallus:45

F6T9V7              	100.00%		F1NEN1              	100.00%
                    	       		H9L1M6              	100.00%
                    	       		F1NM56              	23.03%
Bootstrap support for F6T9V7 as seed ortholog is 100%.
Bootstrap support for F1NEN1 as seed ortholog is 100%.
Bootstrap support for H9L1M6 as seed ortholog is 100%.

Group of orthologs #5030. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 G.gallus:45

H2XVJ5              	100.00%		Q50L61              	100.00%
                    	       		F1N9A2              	6.34%
                    	       		F1NF17              	5.16%
Bootstrap support for H2XVJ5 as seed ortholog is 100%.
Bootstrap support for Q50L61 as seed ortholog is 100%.

Group of orthologs #5031. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 G.gallus:45

H2Y023              	100.00%		F1NLB6              	100.00%
H2XTM4              	57.34%		
Bootstrap support for H2Y023 as seed ortholog is 100%.
Bootstrap support for F1NLB6 as seed ortholog is 100%.

Group of orthologs #5032. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 G.gallus:45

F6SBN1              	100.00%		E1BQQ8              	100.00%
Bootstrap support for F6SBN1 as seed ortholog is 100%.
Bootstrap support for E1BQQ8 as seed ortholog is 100%.

Group of orthologs #5033. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 G.gallus:45

F6RSS5              	100.00%		H9L135              	100.00%
Bootstrap support for F6RSS5 as seed ortholog is 100%.
Bootstrap support for H9L135 as seed ortholog is 100%.

Group of orthologs #5034. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 G.gallus:44

F6RT14              	100.00%		F1NQY8              	100.00%
                    	       		E1C8J0              	13.88%
                    	       		F1NGU7              	11.48%
Bootstrap support for F6RT14 as seed ortholog is 100%.
Bootstrap support for F1NQY8 as seed ortholog is 100%.

Group of orthologs #5035. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 G.gallus:44

H2XMZ0              	100.00%		E1C044              	100.00%
                    	       		O93393              	33.56%
                    	       		E1C6G7              	13.74%
Bootstrap support for H2XMZ0 as seed ortholog is 100%.
Bootstrap support for E1C044 as seed ortholog is 100%.

Group of orthologs #5036. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 G.gallus:44

F6UFD9              	100.00%		E1C7K8              	100.00%
Bootstrap support for F6UFD9 as seed ortholog is 100%.
Bootstrap support for E1C7K8 as seed ortholog is 100%.

Group of orthologs #5037. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 G.gallus:44

F6UA72              	100.00%		F1NA54              	100.00%
Bootstrap support for F6UA72 as seed ortholog is 100%.
Bootstrap support for F1NA54 as seed ortholog is 100%.

Group of orthologs #5038. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 G.gallus:44

H2XQL8              	100.00%		F1N893              	100.00%
Bootstrap support for H2XQL8 as seed ortholog is 100%.
Bootstrap support for F1N893 as seed ortholog is 100%.

Group of orthologs #5039. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 G.gallus:44

H2XW02              	100.00%		F1P280              	100.00%
Bootstrap support for H2XW02 as seed ortholog is 100%.
Bootstrap support for F1P280 as seed ortholog is 100%.

Group of orthologs #5040. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 G.gallus:43

H2XNL5              	100.00%		E1BXM3              	100.00%
Bootstrap support for H2XNL5 as seed ortholog is 100%.
Bootstrap support for E1BXM3 as seed ortholog is 100%.

Group of orthologs #5041. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 G.gallus:43

H2XU39              	100.00%		F1NM91              	100.00%
Bootstrap support for H2XU39 as seed ortholog is 100%.
Bootstrap support for F1NM91 as seed ortholog is 100%.

Group of orthologs #5042. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 G.gallus:43

Q6L5M4              	100.00%		F1NFI3              	100.00%
Bootstrap support for Q6L5M4 as seed ortholog is 100%.
Bootstrap support for F1NFI3 as seed ortholog is 100%.

Group of orthologs #5043. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 G.gallus:43

H2XS33              	100.00%		Q5ZJI8              	100.00%
Bootstrap support for H2XS33 as seed ortholog is 100%.
Bootstrap support for Q5ZJI8 as seed ortholog is 100%.

Group of orthologs #5044. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 G.gallus:42

Q86SC6              	100.00%		Q98953              	100.00%
F6S6F7              	7.14%		E1C1S0              	24.29%
                    	       		E1C251              	19.29%
                    	       		P28318              	12.86%
                    	       		P24479              	10.71%
                    	       		P27003              	7.14%
Bootstrap support for Q86SC6 as seed ortholog is 100%.
Bootstrap support for Q98953 as seed ortholog is 100%.

Group of orthologs #5045. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 G.gallus:42

F6S1I4              	100.00%		F1NX98              	100.00%
                    	       		E1BUS0              	24.84%
Bootstrap support for F6S1I4 as seed ortholog is 100%.
Bootstrap support for F1NX98 as seed ortholog is 100%.

Group of orthologs #5046. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 G.gallus:42

H2XXA5              	100.00%		F1NNJ6              	100.00%
F6RH28              	22.87%		
Bootstrap support for H2XXA5 as seed ortholog is 100%.
Bootstrap support for F1NNJ6 as seed ortholog is 100%.

Group of orthologs #5047. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 G.gallus:42

F6W4Y1              	100.00%		E1BYI8              	100.00%
Bootstrap support for F6W4Y1 as seed ortholog is 100%.
Bootstrap support for E1BYI8 as seed ortholog is 100%.

Group of orthologs #5048. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 G.gallus:42

H2XQ20              	100.00%		F1P5R5              	100.00%
Bootstrap support for H2XQ20 as seed ortholog is 100%.
Bootstrap support for F1P5R5 as seed ortholog is 100%.

Group of orthologs #5049. Best score 40 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 G.gallus:40

F7B293              	100.00%		E1C4Q7              	100.00%
F6ZIL3              	29.12%		P16005              	12.86%
Bootstrap support for F7B293 as seed ortholog is 100%.
Bootstrap support for E1C4Q7 as seed ortholog is 100%.