###################################
3942 groups of orthologs
4447 in-paralogs from C.intestinalis
4889 in-paralogs from D.pseudoobscura
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 5409 bits
Score difference with first non-orthologous sequence - C.intestinalis:1199 D.pseudoobscura:801

F7AU91              	100.00%		Q293J4              	100.00%
Bootstrap support for F7AU91 as seed ortholog is 100%.
Bootstrap support for Q293J4 as seed ortholog is 100%.

Group of orthologs #2. Best score 4753 bits
Score difference with first non-orthologous sequence - C.intestinalis:3288 D.pseudoobscura:2723

F6V620              	100.00%		B5DVH1              	100.00%
H2XPC8              	17.71%		
F6PHB9              	9.41%		
Bootstrap support for F6V620 as seed ortholog is 100%.
Bootstrap support for B5DVH1 as seed ortholog is 100%.

Group of orthologs #3. Best score 3891 bits
Score difference with first non-orthologous sequence - C.intestinalis:3891 D.pseudoobscura:3891

H2XSF3              	100.00%		Q28Y48              	100.00%
Bootstrap support for H2XSF3 as seed ortholog is 100%.
Bootstrap support for Q28Y48 as seed ortholog is 100%.

Group of orthologs #4. Best score 3068 bits
Score difference with first non-orthologous sequence - C.intestinalis:3068 D.pseudoobscura:1683

F6ZLB7              	100.00%		Q2M0I9              	100.00%
Bootstrap support for F6ZLB7 as seed ortholog is 100%.
Bootstrap support for Q2M0I9 as seed ortholog is 100%.

Group of orthologs #5. Best score 2609 bits
Score difference with first non-orthologous sequence - C.intestinalis:2609 D.pseudoobscura:2132

F6SUC2              	100.00%		Q29IN2              	100.00%
Bootstrap support for F6SUC2 as seed ortholog is 100%.
Bootstrap support for Q29IN2 as seed ortholog is 100%.

Group of orthologs #6. Best score 2575 bits
Score difference with first non-orthologous sequence - C.intestinalis:2575 D.pseudoobscura:2575

F7AMF6              	100.00%		Q29CS2              	100.00%
Bootstrap support for F7AMF6 as seed ortholog is 100%.
Bootstrap support for Q29CS2 as seed ortholog is 100%.

Group of orthologs #7. Best score 2510 bits
Score difference with first non-orthologous sequence - C.intestinalis:2510 D.pseudoobscura:2510

F6T0F1              	100.00%		Q290Y2              	100.00%
Bootstrap support for F6T0F1 as seed ortholog is 100%.
Bootstrap support for Q290Y2 as seed ortholog is 100%.

Group of orthologs #8. Best score 2371 bits
Score difference with first non-orthologous sequence - C.intestinalis:2371 D.pseudoobscura:882

F6WNE0              	100.00%		Q29P71              	100.00%
Bootstrap support for F6WNE0 as seed ortholog is 100%.
Bootstrap support for Q29P71 as seed ortholog is 100%.

Group of orthologs #9. Best score 2268 bits
Score difference with first non-orthologous sequence - C.intestinalis:2165 D.pseudoobscura:1313

F6Q5V5              	100.00%		Q29JE1              	100.00%
Bootstrap support for F6Q5V5 as seed ortholog is 100%.
Bootstrap support for Q29JE1 as seed ortholog is 100%.

Group of orthologs #10. Best score 2243 bits
Score difference with first non-orthologous sequence - C.intestinalis:2243 D.pseudoobscura:1803

H2XZY7              	100.00%		Q292L1              	100.00%
Bootstrap support for H2XZY7 as seed ortholog is 100%.
Bootstrap support for Q292L1 as seed ortholog is 100%.

Group of orthologs #11. Best score 2175 bits
Score difference with first non-orthologous sequence - C.intestinalis:2175 D.pseudoobscura:2175

F6WUQ7              	100.00%		Q29BI3              	100.00%
Bootstrap support for F6WUQ7 as seed ortholog is 100%.
Bootstrap support for Q29BI3 as seed ortholog is 100%.

Group of orthologs #12. Best score 2100 bits
Score difference with first non-orthologous sequence - C.intestinalis:1434 D.pseudoobscura:2100

F7AZ47              	100.00%		B5DM97              	100.00%
Bootstrap support for F7AZ47 as seed ortholog is 100%.
Bootstrap support for B5DM97 as seed ortholog is 100%.

Group of orthologs #13. Best score 2051 bits
Score difference with first non-orthologous sequence - C.intestinalis:2051 D.pseudoobscura:1287

F6QR00              	100.00%		Q298X6              	100.00%
Bootstrap support for F6QR00 as seed ortholog is 100%.
Bootstrap support for Q298X6 as seed ortholog is 100%.

Group of orthologs #14. Best score 2012 bits
Score difference with first non-orthologous sequence - C.intestinalis:2012 D.pseudoobscura:2012

F6WWV8              	100.00%		Q29FI8              	100.00%
Bootstrap support for F6WWV8 as seed ortholog is 100%.
Bootstrap support for Q29FI8 as seed ortholog is 100%.

Group of orthologs #15. Best score 2001 bits
Score difference with first non-orthologous sequence - C.intestinalis:2001 D.pseudoobscura:1463

F6RXY6              	100.00%		Q29FI3              	100.00%
Bootstrap support for F6RXY6 as seed ortholog is 100%.
Bootstrap support for Q29FI3 as seed ortholog is 100%.

Group of orthologs #16. Best score 1936 bits
Score difference with first non-orthologous sequence - C.intestinalis:1936 D.pseudoobscura:1504

H2Y265              	100.00%		B5DI76              	100.00%
H2XWY7              	98.08%		
F7AY44              	10.05%		
Bootstrap support for H2Y265 as seed ortholog is 100%.
Bootstrap support for B5DI76 as seed ortholog is 100%.

Group of orthologs #17. Best score 1885 bits
Score difference with first non-orthologous sequence - C.intestinalis:1709 D.pseudoobscura:1885

H2XRN5              	100.00%		Q29EZ8              	100.00%
Bootstrap support for H2XRN5 as seed ortholog is 100%.
Bootstrap support for Q29EZ8 as seed ortholog is 100%.

Group of orthologs #18. Best score 1881 bits
Score difference with first non-orthologous sequence - C.intestinalis:1881 D.pseudoobscura:1881

F6XN27              	100.00%		B5DLK9              	100.00%
Bootstrap support for F6XN27 as seed ortholog is 100%.
Bootstrap support for B5DLK9 as seed ortholog is 100%.

Group of orthologs #19. Best score 1812 bits
Score difference with first non-orthologous sequence - C.intestinalis:1812 D.pseudoobscura:1812

F6SXA4              	100.00%		Q29DX1              	100.00%
Bootstrap support for F6SXA4 as seed ortholog is 100%.
Bootstrap support for Q29DX1 as seed ortholog is 100%.

Group of orthologs #20. Best score 1772 bits
Score difference with first non-orthologous sequence - C.intestinalis:1772 D.pseudoobscura:1772

F6YKH7              	100.00%		Q296F8              	100.00%
Bootstrap support for F6YKH7 as seed ortholog is 100%.
Bootstrap support for Q296F8 as seed ortholog is 100%.

Group of orthologs #21. Best score 1769 bits
Score difference with first non-orthologous sequence - C.intestinalis:1215 D.pseudoobscura:1769

F6X056              	100.00%		Q29J29              	100.00%
Bootstrap support for F6X056 as seed ortholog is 100%.
Bootstrap support for Q29J29 as seed ortholog is 100%.

Group of orthologs #22. Best score 1711 bits
Score difference with first non-orthologous sequence - C.intestinalis:519 D.pseudoobscura:1119

F6X5E1              	100.00%		Q29KC2              	100.00%
Bootstrap support for F6X5E1 as seed ortholog is 100%.
Bootstrap support for Q29KC2 as seed ortholog is 100%.

Group of orthologs #23. Best score 1702 bits
Score difference with first non-orthologous sequence - C.intestinalis:1702 D.pseudoobscura:1702

H2Y0W9              	100.00%		Q295H7              	100.00%
Bootstrap support for H2Y0W9 as seed ortholog is 100%.
Bootstrap support for Q295H7 as seed ortholog is 100%.

Group of orthologs #24. Best score 1673 bits
Score difference with first non-orthologous sequence - C.intestinalis:1673 D.pseudoobscura:1577

F6UE33              	100.00%		Q29K69              	100.00%
Bootstrap support for F6UE33 as seed ortholog is 100%.
Bootstrap support for Q29K69 as seed ortholog is 100%.

Group of orthologs #25. Best score 1651 bits
Score difference with first non-orthologous sequence - C.intestinalis:1651 D.pseudoobscura:1651

F6W1H2              	100.00%		Q29DZ6              	100.00%
Bootstrap support for F6W1H2 as seed ortholog is 100%.
Bootstrap support for Q29DZ6 as seed ortholog is 100%.

Group of orthologs #26. Best score 1608 bits
Score difference with first non-orthologous sequence - C.intestinalis:1608 D.pseudoobscura:1608

F7BBD1              	100.00%		B5E0S4              	100.00%
Bootstrap support for F7BBD1 as seed ortholog is 100%.
Bootstrap support for B5E0S4 as seed ortholog is 100%.

Group of orthologs #27. Best score 1593 bits
Score difference with first non-orthologous sequence - C.intestinalis:1160 D.pseudoobscura:1593

F6TWU9              	100.00%		Q28XA7              	100.00%
Bootstrap support for F6TWU9 as seed ortholog is 100%.
Bootstrap support for Q28XA7 as seed ortholog is 100%.

Group of orthologs #28. Best score 1584 bits
Score difference with first non-orthologous sequence - C.intestinalis:1187 D.pseudoobscura:931

F6YKR9              	100.00%		Q292F4              	100.00%
Bootstrap support for F6YKR9 as seed ortholog is 100%.
Bootstrap support for Q292F4 as seed ortholog is 100%.

Group of orthologs #29. Best score 1555 bits
Score difference with first non-orthologous sequence - C.intestinalis:1555 D.pseudoobscura:1555

F6ZP18              	100.00%		Q295C2              	100.00%
Bootstrap support for F6ZP18 as seed ortholog is 100%.
Bootstrap support for Q295C2 as seed ortholog is 100%.

Group of orthologs #30. Best score 1518 bits
Score difference with first non-orthologous sequence - C.intestinalis:1518 D.pseudoobscura:1518

F6T8P3              	100.00%		Q298M5              	100.00%
Bootstrap support for F6T8P3 as seed ortholog is 100%.
Bootstrap support for Q298M5 as seed ortholog is 100%.

Group of orthologs #31. Best score 1510 bits
Score difference with first non-orthologous sequence - C.intestinalis:1510 D.pseudoobscura:1116

F6Q5L9              	100.00%		Q28WQ1              	100.00%
Bootstrap support for F6Q5L9 as seed ortholog is 100%.
Bootstrap support for Q28WQ1 as seed ortholog is 100%.

Group of orthologs #32. Best score 1487 bits
Score difference with first non-orthologous sequence - C.intestinalis:1487 D.pseudoobscura:252

H2XY07              	100.00%		I5ANS5              	100.00%
Bootstrap support for H2XY07 as seed ortholog is 100%.
Bootstrap support for I5ANS5 as seed ortholog is 99%.

Group of orthologs #33. Best score 1484 bits
Score difference with first non-orthologous sequence - C.intestinalis:1484 D.pseudoobscura:1484

F6XJM1              	100.00%		Q28ZL4              	100.00%
Bootstrap support for F6XJM1 as seed ortholog is 100%.
Bootstrap support for Q28ZL4 as seed ortholog is 100%.

Group of orthologs #34. Best score 1483 bits
Score difference with first non-orthologous sequence - C.intestinalis:1483 D.pseudoobscura:1124

F6WXT4              	100.00%		Q29AG5              	100.00%
Bootstrap support for F6WXT4 as seed ortholog is 100%.
Bootstrap support for Q29AG5 as seed ortholog is 100%.

Group of orthologs #35. Best score 1468 bits
Score difference with first non-orthologous sequence - C.intestinalis:1468 D.pseudoobscura:1468

H2XJT1              	100.00%		Q29NZ9              	100.00%
Bootstrap support for H2XJT1 as seed ortholog is 100%.
Bootstrap support for Q29NZ9 as seed ortholog is 100%.

Group of orthologs #36. Best score 1456 bits
Score difference with first non-orthologous sequence - C.intestinalis:1456 D.pseudoobscura:1456

F7AKG2              	100.00%		Q29K53              	100.00%
Bootstrap support for F7AKG2 as seed ortholog is 100%.
Bootstrap support for Q29K53 as seed ortholog is 100%.

Group of orthologs #37. Best score 1449 bits
Score difference with first non-orthologous sequence - C.intestinalis:1449 D.pseudoobscura:1085

F6X211              	100.00%		Q292Q0              	100.00%
H2XSH4              	91.59%		
H2XNA4              	88.79%		
F6X229              	7.85%		
Bootstrap support for F6X211 as seed ortholog is 100%.
Bootstrap support for Q292Q0 as seed ortholog is 100%.

Group of orthologs #38. Best score 1428 bits
Score difference with first non-orthologous sequence - C.intestinalis:1428 D.pseudoobscura:1052

F6URP5              	100.00%		Q28XJ1              	100.00%
Bootstrap support for F6URP5 as seed ortholog is 100%.
Bootstrap support for Q28XJ1 as seed ortholog is 100%.

Group of orthologs #39. Best score 1406 bits
Score difference with first non-orthologous sequence - C.intestinalis:993 D.pseudoobscura:997

Q4H2Q8              	100.00%		Q293F0              	100.00%
Bootstrap support for Q4H2Q8 as seed ortholog is 100%.
Bootstrap support for Q293F0 as seed ortholog is 100%.

Group of orthologs #40. Best score 1399 bits
Score difference with first non-orthologous sequence - C.intestinalis:1399 D.pseudoobscura:1399

H2Y3E5              	100.00%		Q29M08              	100.00%
                    	       		Q29M07              	41.72%
                    	       		B5DVP9              	9.38%
Bootstrap support for H2Y3E5 as seed ortholog is 100%.
Bootstrap support for Q29M08 as seed ortholog is 100%.

Group of orthologs #41. Best score 1399 bits
Score difference with first non-orthologous sequence - C.intestinalis:1399 D.pseudoobscura:1399

F7AHP3              	100.00%		B5DWM8              	100.00%
Bootstrap support for F7AHP3 as seed ortholog is 100%.
Bootstrap support for B5DWM8 as seed ortholog is 100%.

Group of orthologs #42. Best score 1385 bits
Score difference with first non-orthologous sequence - C.intestinalis:1385 D.pseudoobscura:1385

F6PWI5              	100.00%		B5DHR2              	100.00%
Bootstrap support for F6PWI5 as seed ortholog is 100%.
Bootstrap support for B5DHR2 as seed ortholog is 100%.

Group of orthologs #43. Best score 1326 bits
Score difference with first non-orthologous sequence - C.intestinalis:1326 D.pseudoobscura:1326

H2XU88              	100.00%		Q29GF8              	100.00%
Bootstrap support for H2XU88 as seed ortholog is 100%.
Bootstrap support for Q29GF8 as seed ortholog is 100%.

Group of orthologs #44. Best score 1322 bits
Score difference with first non-orthologous sequence - C.intestinalis:1322 D.pseudoobscura:1322

F6YD90              	100.00%		Q29MC7              	100.00%
Bootstrap support for F6YD90 as seed ortholog is 100%.
Bootstrap support for Q29MC7 as seed ortholog is 100%.

Group of orthologs #45. Best score 1319 bits
Score difference with first non-orthologous sequence - C.intestinalis:1319 D.pseudoobscura:725

F6RW91              	100.00%		Q29KH0              	100.00%
Bootstrap support for F6RW91 as seed ortholog is 100%.
Bootstrap support for Q29KH0 as seed ortholog is 100%.

Group of orthologs #46. Best score 1314 bits
Score difference with first non-orthologous sequence - C.intestinalis:820 D.pseudoobscura:752

F6UYA6              	100.00%		Q29GN6              	100.00%
Bootstrap support for F6UYA6 as seed ortholog is 100%.
Bootstrap support for Q29GN6 as seed ortholog is 100%.

Group of orthologs #47. Best score 1312 bits
Score difference with first non-orthologous sequence - C.intestinalis:1312 D.pseudoobscura:1312

F6QH36              	100.00%		Q29IN8              	100.00%
Bootstrap support for F6QH36 as seed ortholog is 100%.
Bootstrap support for Q29IN8 as seed ortholog is 100%.

Group of orthologs #48. Best score 1309 bits
Score difference with first non-orthologous sequence - C.intestinalis:1309 D.pseudoobscura:1309

F6TIR0              	100.00%		Q29IG0              	100.00%
Bootstrap support for F6TIR0 as seed ortholog is 100%.
Bootstrap support for Q29IG0 as seed ortholog is 100%.

Group of orthologs #49. Best score 1304 bits
Score difference with first non-orthologous sequence - C.intestinalis:1304 D.pseudoobscura:1304

F6XL66              	100.00%		Q291J5              	100.00%
Bootstrap support for F6XL66 as seed ortholog is 100%.
Bootstrap support for Q291J5 as seed ortholog is 100%.

Group of orthologs #50. Best score 1303 bits
Score difference with first non-orthologous sequence - C.intestinalis:1173 D.pseudoobscura:1160

F7AKQ3              	100.00%		Q29F05              	100.00%
Bootstrap support for F7AKQ3 as seed ortholog is 100%.
Bootstrap support for Q29F05 as seed ortholog is 100%.

Group of orthologs #51. Best score 1285 bits
Score difference with first non-orthologous sequence - C.intestinalis:1285 D.pseudoobscura:1285

H2XJF1              	100.00%		B5DI06              	100.00%
Bootstrap support for H2XJF1 as seed ortholog is 100%.
Bootstrap support for B5DI06 as seed ortholog is 100%.

Group of orthologs #52. Best score 1279 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 D.pseudoobscura:155

F6WTL7              	100.00%		Q29L08              	100.00%
Bootstrap support for F6WTL7 as seed ortholog is 87%.
Bootstrap support for Q29L08 as seed ortholog is 87%.

Group of orthologs #53. Best score 1277 bits
Score difference with first non-orthologous sequence - C.intestinalis:1277 D.pseudoobscura:1277

F6UM75              	100.00%		Q291U7              	100.00%
Bootstrap support for F6UM75 as seed ortholog is 100%.
Bootstrap support for Q291U7 as seed ortholog is 100%.

Group of orthologs #54. Best score 1274 bits
Score difference with first non-orthologous sequence - C.intestinalis:1274 D.pseudoobscura:1168

H2XKB1              	100.00%		B5DM61              	100.00%
Bootstrap support for H2XKB1 as seed ortholog is 100%.
Bootstrap support for B5DM61 as seed ortholog is 100%.

Group of orthologs #55. Best score 1274 bits
Score difference with first non-orthologous sequence - C.intestinalis:1274 D.pseudoobscura:968

F6WCR1              	100.00%		Q29D92              	100.00%
Bootstrap support for F6WCR1 as seed ortholog is 100%.
Bootstrap support for Q29D92 as seed ortholog is 100%.

Group of orthologs #56. Best score 1274 bits
Score difference with first non-orthologous sequence - C.intestinalis:1274 D.pseudoobscura:1274

F7BJA3              	100.00%		Q29DK3              	100.00%
Bootstrap support for F7BJA3 as seed ortholog is 100%.
Bootstrap support for Q29DK3 as seed ortholog is 100%.

Group of orthologs #57. Best score 1266 bits
Score difference with first non-orthologous sequence - C.intestinalis:1266 D.pseudoobscura:902

F6VLN4              	100.00%		Q290U1              	100.00%
Bootstrap support for F6VLN4 as seed ortholog is 100%.
Bootstrap support for Q290U1 as seed ortholog is 100%.

Group of orthologs #58. Best score 1253 bits
Score difference with first non-orthologous sequence - C.intestinalis:1253 D.pseudoobscura:1253

F6S0L5              	100.00%		Q299G2              	100.00%
Bootstrap support for F6S0L5 as seed ortholog is 100%.
Bootstrap support for Q299G2 as seed ortholog is 100%.

Group of orthologs #59. Best score 1251 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 D.pseudoobscura:79

F6QCF9              	100.00%		Q29HM6              	100.00%
Bootstrap support for F6QCF9 as seed ortholog is 99%.
Bootstrap support for Q29HM6 as seed ortholog is 94%.

Group of orthologs #60. Best score 1248 bits
Score difference with first non-orthologous sequence - C.intestinalis:1248 D.pseudoobscura:1159

F7B7Y1              	100.00%		Q29NQ9              	100.00%
Bootstrap support for F7B7Y1 as seed ortholog is 100%.
Bootstrap support for Q29NQ9 as seed ortholog is 100%.

Group of orthologs #61. Best score 1247 bits
Score difference with first non-orthologous sequence - C.intestinalis:1247 D.pseudoobscura:796

F6XKY1              	100.00%		B5DK66              	100.00%
Bootstrap support for F6XKY1 as seed ortholog is 100%.
Bootstrap support for B5DK66 as seed ortholog is 100%.

Group of orthologs #62. Best score 1240 bits
Score difference with first non-orthologous sequence - C.intestinalis:1240 D.pseudoobscura:1240

F6PV45              	100.00%		Q29MI1              	100.00%
Bootstrap support for F6PV45 as seed ortholog is 100%.
Bootstrap support for Q29MI1 as seed ortholog is 100%.

Group of orthologs #63. Best score 1233 bits
Score difference with first non-orthologous sequence - C.intestinalis:1233 D.pseudoobscura:817

H2XZZ5              	100.00%		Q29JZ8              	100.00%
Bootstrap support for H2XZZ5 as seed ortholog is 100%.
Bootstrap support for Q29JZ8 as seed ortholog is 100%.

Group of orthologs #64. Best score 1232 bits
Score difference with first non-orthologous sequence - C.intestinalis:1232 D.pseudoobscura:1232

F6W0Y5              	100.00%		P22811              	100.00%
F6V519              	16.61%		
Bootstrap support for F6W0Y5 as seed ortholog is 100%.
Bootstrap support for P22811 as seed ortholog is 100%.

Group of orthologs #65. Best score 1230 bits
Score difference with first non-orthologous sequence - C.intestinalis:1230 D.pseudoobscura:1230

F7BKT8              	100.00%		Q29P92              	100.00%
Bootstrap support for F7BKT8 as seed ortholog is 100%.
Bootstrap support for Q29P92 as seed ortholog is 100%.

Group of orthologs #66. Best score 1228 bits
Score difference with first non-orthologous sequence - C.intestinalis:1228 D.pseudoobscura:871

F6YK55              	100.00%		Q28ZU1              	100.00%
Bootstrap support for F6YK55 as seed ortholog is 100%.
Bootstrap support for Q28ZU1 as seed ortholog is 100%.

Group of orthologs #67. Best score 1224 bits
Score difference with first non-orthologous sequence - C.intestinalis:1224 D.pseudoobscura:1224

F7ANR5              	100.00%		Q299R6              	100.00%
Bootstrap support for F7ANR5 as seed ortholog is 100%.
Bootstrap support for Q299R6 as seed ortholog is 100%.

Group of orthologs #68. Best score 1218 bits
Score difference with first non-orthologous sequence - C.intestinalis:1218 D.pseudoobscura:1218

F6Z5U4              	100.00%		Q29KE6              	100.00%
Bootstrap support for F6Z5U4 as seed ortholog is 100%.
Bootstrap support for Q29KE6 as seed ortholog is 100%.

Group of orthologs #69. Best score 1218 bits
Score difference with first non-orthologous sequence - C.intestinalis:1218 D.pseudoobscura:1218

F7ABF6              	100.00%		Q29N38              	100.00%
Bootstrap support for F7ABF6 as seed ortholog is 100%.
Bootstrap support for Q29N38 as seed ortholog is 100%.

Group of orthologs #70. Best score 1207 bits
Score difference with first non-orthologous sequence - C.intestinalis:1207 D.pseudoobscura:1207

F6YYG7              	100.00%		B5DWC3              	100.00%
                    	       		B5DWC6              	97.95%
Bootstrap support for F6YYG7 as seed ortholog is 100%.
Bootstrap support for B5DWC3 as seed ortholog is 100%.

Group of orthologs #71. Best score 1207 bits
Score difference with first non-orthologous sequence - C.intestinalis:1207 D.pseudoobscura:1207

F6U9F4              	100.00%		Q29AT7              	100.00%
                    	       		Q29AM0              	68.86%
Bootstrap support for F6U9F4 as seed ortholog is 100%.
Bootstrap support for Q29AT7 as seed ortholog is 100%.

Group of orthologs #72. Best score 1206 bits
Score difference with first non-orthologous sequence - C.intestinalis:1206 D.pseudoobscura:826

F6WN97              	100.00%		B5DYT7              	100.00%
Bootstrap support for F6WN97 as seed ortholog is 100%.
Bootstrap support for B5DYT7 as seed ortholog is 100%.

Group of orthologs #73. Best score 1191 bits
Score difference with first non-orthologous sequence - C.intestinalis:1191 D.pseudoobscura:1191

F6SQF6              	100.00%		Q29E13              	100.00%
Bootstrap support for F6SQF6 as seed ortholog is 100%.
Bootstrap support for Q29E13 as seed ortholog is 100%.

Group of orthologs #74. Best score 1190 bits
Score difference with first non-orthologous sequence - C.intestinalis:1190 D.pseudoobscura:1012

F6QI54              	100.00%		Q29BZ3              	100.00%
Bootstrap support for F6QI54 as seed ortholog is 100%.
Bootstrap support for Q29BZ3 as seed ortholog is 100%.

Group of orthologs #75. Best score 1190 bits
Score difference with first non-orthologous sequence - C.intestinalis:1190 D.pseudoobscura:1190

H2XQK9              	100.00%		B5DMP8              	100.00%
Bootstrap support for H2XQK9 as seed ortholog is 100%.
Bootstrap support for B5DMP8 as seed ortholog is 100%.

Group of orthologs #76. Best score 1184 bits
Score difference with first non-orthologous sequence - C.intestinalis:1184 D.pseudoobscura:1184

H2XLC6              	100.00%		Q2M0E2              	100.00%
Bootstrap support for H2XLC6 as seed ortholog is 100%.
Bootstrap support for Q2M0E2 as seed ortholog is 100%.

Group of orthologs #77. Best score 1168 bits
Score difference with first non-orthologous sequence - C.intestinalis:1168 D.pseudoobscura:1168

F6U4V1              	100.00%		Q28Y05              	100.00%
Bootstrap support for F6U4V1 as seed ortholog is 100%.
Bootstrap support for Q28Y05 as seed ortholog is 100%.

Group of orthologs #78. Best score 1164 bits
Score difference with first non-orthologous sequence - C.intestinalis:1164 D.pseudoobscura:1164

F6ZAQ4              	100.00%		Q29CY8              	100.00%
Bootstrap support for F6ZAQ4 as seed ortholog is 100%.
Bootstrap support for Q29CY8 as seed ortholog is 100%.

Group of orthologs #79. Best score 1163 bits
Score difference with first non-orthologous sequence - C.intestinalis:1163 D.pseudoobscura:1163

H2XNV5              	100.00%		Q29J93              	100.00%
Bootstrap support for H2XNV5 as seed ortholog is 100%.
Bootstrap support for Q29J93 as seed ortholog is 100%.

Group of orthologs #80. Best score 1156 bits
Score difference with first non-orthologous sequence - C.intestinalis:655 D.pseudoobscura:688

F6YII9              	100.00%		B5DKB5              	100.00%
Bootstrap support for F6YII9 as seed ortholog is 100%.
Bootstrap support for B5DKB5 as seed ortholog is 100%.

Group of orthologs #81. Best score 1156 bits
Score difference with first non-orthologous sequence - C.intestinalis:887 D.pseudoobscura:1156

F6TS15              	100.00%		Q29HK6              	100.00%
Bootstrap support for F6TS15 as seed ortholog is 100%.
Bootstrap support for Q29HK6 as seed ortholog is 100%.

Group of orthologs #82. Best score 1156 bits
Score difference with first non-orthologous sequence - C.intestinalis:1156 D.pseudoobscura:1156

F6Z743              	100.00%		Q29G21              	100.00%
Bootstrap support for F6Z743 as seed ortholog is 100%.
Bootstrap support for Q29G21 as seed ortholog is 100%.

Group of orthologs #83. Best score 1154 bits
Score difference with first non-orthologous sequence - C.intestinalis:1154 D.pseudoobscura:1154

H2XPG3              	100.00%		Q29JF8              	100.00%
Bootstrap support for H2XPG3 as seed ortholog is 100%.
Bootstrap support for Q29JF8 as seed ortholog is 100%.

Group of orthologs #84. Best score 1153 bits
Score difference with first non-orthologous sequence - C.intestinalis:1153 D.pseudoobscura:1153

F6R7T5              	100.00%		Q29FY0              	100.00%
Bootstrap support for F6R7T5 as seed ortholog is 100%.
Bootstrap support for Q29FY0 as seed ortholog is 100%.

Group of orthologs #85. Best score 1153 bits
Score difference with first non-orthologous sequence - C.intestinalis:1153 D.pseudoobscura:1153

F6QXZ7              	100.00%		Q29IC8              	100.00%
Bootstrap support for F6QXZ7 as seed ortholog is 100%.
Bootstrap support for Q29IC8 as seed ortholog is 100%.

Group of orthologs #86. Best score 1146 bits
Score difference with first non-orthologous sequence - C.intestinalis:1146 D.pseudoobscura:1146

F6V993              	100.00%		Q28YN3              	100.00%
Bootstrap support for F6V993 as seed ortholog is 100%.
Bootstrap support for Q28YN3 as seed ortholog is 100%.

Group of orthologs #87. Best score 1138 bits
Score difference with first non-orthologous sequence - C.intestinalis:1138 D.pseudoobscura:1138

F6WUJ1              	100.00%		Q29HM9              	100.00%
Bootstrap support for F6WUJ1 as seed ortholog is 100%.
Bootstrap support for Q29HM9 as seed ortholog is 100%.

Group of orthologs #88. Best score 1134 bits
Score difference with first non-orthologous sequence - C.intestinalis:1134 D.pseudoobscura:1134

F6PKD1              	100.00%		Q29EV9              	100.00%
Bootstrap support for F6PKD1 as seed ortholog is 100%.
Bootstrap support for Q29EV9 as seed ortholog is 100%.

Group of orthologs #89. Best score 1133 bits
Score difference with first non-orthologous sequence - C.intestinalis:1133 D.pseudoobscura:539

F6ZHQ8              	100.00%		B5E065              	100.00%
Bootstrap support for F6ZHQ8 as seed ortholog is 100%.
Bootstrap support for B5E065 as seed ortholog is 100%.

Group of orthologs #90. Best score 1126 bits
Score difference with first non-orthologous sequence - C.intestinalis:1126 D.pseudoobscura:1126

H2XLC2              	100.00%		Q29H04              	100.00%
Bootstrap support for H2XLC2 as seed ortholog is 100%.
Bootstrap support for Q29H04 as seed ortholog is 100%.

Group of orthologs #91. Best score 1121 bits
Score difference with first non-orthologous sequence - C.intestinalis:1121 D.pseudoobscura:1121

F6R8H4              	100.00%		Q293Q3              	100.00%
Bootstrap support for F6R8H4 as seed ortholog is 100%.
Bootstrap support for Q293Q3 as seed ortholog is 100%.

Group of orthologs #92. Best score 1121 bits
Score difference with first non-orthologous sequence - C.intestinalis:1121 D.pseudoobscura:1121

F6Z3T2              	100.00%		Q29CJ5              	100.00%
Bootstrap support for F6Z3T2 as seed ortholog is 100%.
Bootstrap support for Q29CJ5 as seed ortholog is 100%.

Group of orthologs #93. Best score 1118 bits
Score difference with first non-orthologous sequence - C.intestinalis:1118 D.pseudoobscura:1118

H2XKD5              	100.00%		I5ANM9              	100.00%
Bootstrap support for H2XKD5 as seed ortholog is 100%.
Bootstrap support for I5ANM9 as seed ortholog is 100%.

Group of orthologs #94. Best score 1112 bits
Score difference with first non-orthologous sequence - C.intestinalis:1112 D.pseudoobscura:810

F6W1I6              	100.00%		B5DRY0              	100.00%
Bootstrap support for F6W1I6 as seed ortholog is 100%.
Bootstrap support for B5DRY0 as seed ortholog is 100%.

Group of orthologs #95. Best score 1109 bits
Score difference with first non-orthologous sequence - C.intestinalis:1109 D.pseudoobscura:1014

F6Y4K6              	100.00%		Q29M40              	100.00%
Bootstrap support for F6Y4K6 as seed ortholog is 100%.
Bootstrap support for Q29M40 as seed ortholog is 100%.

Group of orthologs #96. Best score 1108 bits
Score difference with first non-orthologous sequence - C.intestinalis:1108 D.pseudoobscura:1108

F6W1V5              	100.00%		Q292Q2              	100.00%
Bootstrap support for F6W1V5 as seed ortholog is 100%.
Bootstrap support for Q292Q2 as seed ortholog is 100%.

Group of orthologs #97. Best score 1108 bits
Score difference with first non-orthologous sequence - C.intestinalis:1108 D.pseudoobscura:1108

F6ZJZ6              	100.00%		Q294U7              	100.00%
Bootstrap support for F6ZJZ6 as seed ortholog is 100%.
Bootstrap support for Q294U7 as seed ortholog is 100%.

Group of orthologs #98. Best score 1107 bits
Score difference with first non-orthologous sequence - C.intestinalis:1107 D.pseudoobscura:1107

H2XNB0              	100.00%		Q294Z3              	100.00%
Bootstrap support for H2XNB0 as seed ortholog is 100%.
Bootstrap support for Q294Z3 as seed ortholog is 100%.

Group of orthologs #99. Best score 1104 bits
Score difference with first non-orthologous sequence - C.intestinalis:1104 D.pseudoobscura:1104

F6QIX3              	100.00%		B5DPP2              	100.00%
Bootstrap support for F6QIX3 as seed ortholog is 100%.
Bootstrap support for B5DPP2 as seed ortholog is 100%.

Group of orthologs #100. Best score 1096 bits
Score difference with first non-orthologous sequence - C.intestinalis:1096 D.pseudoobscura:1096

Q1RQ01              	100.00%		Q299I8              	100.00%
Bootstrap support for Q1RQ01 as seed ortholog is 100%.
Bootstrap support for Q299I8 as seed ortholog is 100%.

Group of orthologs #101. Best score 1089 bits
Score difference with first non-orthologous sequence - C.intestinalis:1089 D.pseudoobscura:1089

F6UHM2              	100.00%		Q29FI4              	100.00%
Bootstrap support for F6UHM2 as seed ortholog is 100%.
Bootstrap support for Q29FI4 as seed ortholog is 100%.

Group of orthologs #102. Best score 1089 bits
Score difference with first non-orthologous sequence - C.intestinalis:1089 D.pseudoobscura:1089

F6UXR3              	100.00%		Q2LYV7              	100.00%
Bootstrap support for F6UXR3 as seed ortholog is 100%.
Bootstrap support for Q2LYV7 as seed ortholog is 100%.

Group of orthologs #103. Best score 1088 bits
Score difference with first non-orthologous sequence - C.intestinalis:638 D.pseudoobscura:651

H2Y1Z9              	100.00%		Q29NZ1              	100.00%
Bootstrap support for H2Y1Z9 as seed ortholog is 100%.
Bootstrap support for Q29NZ1 as seed ortholog is 100%.

Group of orthologs #104. Best score 1081 bits
Score difference with first non-orthologous sequence - C.intestinalis:633 D.pseudoobscura:655

F6Z6Y7              	100.00%		Q29KL6              	100.00%
Bootstrap support for F6Z6Y7 as seed ortholog is 100%.
Bootstrap support for Q29KL6 as seed ortholog is 100%.

Group of orthologs #105. Best score 1079 bits
Score difference with first non-orthologous sequence - C.intestinalis:1079 D.pseudoobscura:1079

F7BPQ7              	100.00%		B5DNT0              	100.00%
Bootstrap support for F7BPQ7 as seed ortholog is 100%.
Bootstrap support for B5DNT0 as seed ortholog is 100%.

Group of orthologs #106. Best score 1075 bits
Score difference with first non-orthologous sequence - C.intestinalis:1075 D.pseudoobscura:969

F6RUN6              	100.00%		B5DP66              	100.00%
Bootstrap support for F6RUN6 as seed ortholog is 100%.
Bootstrap support for B5DP66 as seed ortholog is 100%.

Group of orthologs #107. Best score 1074 bits
Score difference with first non-orthologous sequence - C.intestinalis:1074 D.pseudoobscura:1074

F7AWF9              	100.00%		Q28WZ1              	100.00%
Bootstrap support for F7AWF9 as seed ortholog is 100%.
Bootstrap support for Q28WZ1 as seed ortholog is 100%.

Group of orthologs #108. Best score 1071 bits
Score difference with first non-orthologous sequence - C.intestinalis:1071 D.pseudoobscura:1071

F6TSV2              	100.00%		Q292D9              	100.00%
Bootstrap support for F6TSV2 as seed ortholog is 100%.
Bootstrap support for Q292D9 as seed ortholog is 100%.

Group of orthologs #109. Best score 1071 bits
Score difference with first non-orthologous sequence - C.intestinalis:1071 D.pseudoobscura:1071

F6WLW9              	100.00%		Q290P2              	100.00%
Bootstrap support for F6WLW9 as seed ortholog is 100%.
Bootstrap support for Q290P2 as seed ortholog is 100%.

Group of orthologs #110. Best score 1066 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 D.pseudoobscura:144

F6W8I3              	100.00%		Q294C1              	100.00%
Bootstrap support for F6W8I3 as seed ortholog is 100%.
Bootstrap support for Q294C1 as seed ortholog is 99%.

Group of orthologs #111. Best score 1059 bits
Score difference with first non-orthologous sequence - C.intestinalis:1059 D.pseudoobscura:711

H2XRP2              	100.00%		Q2M0Q6              	100.00%
Bootstrap support for H2XRP2 as seed ortholog is 100%.
Bootstrap support for Q2M0Q6 as seed ortholog is 100%.

Group of orthologs #112. Best score 1054 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 D.pseudoobscura:668

F6UY41              	100.00%		I5ANW8              	100.00%
Bootstrap support for F6UY41 as seed ortholog is 100%.
Bootstrap support for I5ANW8 as seed ortholog is 100%.

Group of orthologs #113. Best score 1043 bits
Score difference with first non-orthologous sequence - C.intestinalis:1043 D.pseudoobscura:437

H2XS32              	100.00%		Q295S5              	100.00%
Bootstrap support for H2XS32 as seed ortholog is 100%.
Bootstrap support for Q295S5 as seed ortholog is 100%.

Group of orthologs #114. Best score 1042 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 D.pseudoobscura:364

F6QYE3              	100.00%		Q29EW2              	100.00%
Bootstrap support for F6QYE3 as seed ortholog is 100%.
Bootstrap support for Q29EW2 as seed ortholog is 100%.

Group of orthologs #115. Best score 1040 bits
Score difference with first non-orthologous sequence - C.intestinalis:1040 D.pseudoobscura:1040

F6TML4              	100.00%		Q2LZJ4              	100.00%
Bootstrap support for F6TML4 as seed ortholog is 100%.
Bootstrap support for Q2LZJ4 as seed ortholog is 100%.

Group of orthologs #116. Best score 1038 bits
Score difference with first non-orthologous sequence - C.intestinalis:1038 D.pseudoobscura:1038

F6XC92              	100.00%		Q296D7              	100.00%
Bootstrap support for F6XC92 as seed ortholog is 100%.
Bootstrap support for Q296D7 as seed ortholog is 100%.

Group of orthologs #117. Best score 1038 bits
Score difference with first non-orthologous sequence - C.intestinalis:1038 D.pseudoobscura:1038

F6VCT2              	100.00%		Q29MI2              	100.00%
Bootstrap support for F6VCT2 as seed ortholog is 100%.
Bootstrap support for Q29MI2 as seed ortholog is 100%.

Group of orthologs #118. Best score 1029 bits
Score difference with first non-orthologous sequence - C.intestinalis:1029 D.pseudoobscura:1029

F6WQB5              	100.00%		Q28YS3              	100.00%
Bootstrap support for F6WQB5 as seed ortholog is 100%.
Bootstrap support for Q28YS3 as seed ortholog is 100%.

Group of orthologs #119. Best score 1016 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:294

F6SXM4              	100.00%		Q29HE5              	100.00%
Bootstrap support for F6SXM4 as seed ortholog is 99%.
Bootstrap support for Q29HE5 as seed ortholog is 100%.

Group of orthologs #120. Best score 1012 bits
Score difference with first non-orthologous sequence - C.intestinalis:1012 D.pseudoobscura:1012

F6V136              	100.00%		Q291E2              	100.00%
Bootstrap support for F6V136 as seed ortholog is 100%.
Bootstrap support for Q291E2 as seed ortholog is 100%.

Group of orthologs #121. Best score 1012 bits
Score difference with first non-orthologous sequence - C.intestinalis:1012 D.pseudoobscura:1012

H2Y1Y9              	100.00%		Q29EN3              	100.00%
Bootstrap support for H2Y1Y9 as seed ortholog is 100%.
Bootstrap support for Q29EN3 as seed ortholog is 100%.

Group of orthologs #122. Best score 1007 bits
Score difference with first non-orthologous sequence - C.intestinalis:910 D.pseudoobscura:128

H2XJT5              	100.00%		Q29L63              	100.00%
                    	       		B5DJE5              	57.40%
Bootstrap support for H2XJT5 as seed ortholog is 100%.
Bootstrap support for Q29L63 as seed ortholog is 99%.

Group of orthologs #123. Best score 1003 bits
Score difference with first non-orthologous sequence - C.intestinalis:1003 D.pseudoobscura:1003

F6UDK5              	100.00%		Q29KP6              	100.00%
Bootstrap support for F6UDK5 as seed ortholog is 100%.
Bootstrap support for Q29KP6 as seed ortholog is 100%.

Group of orthologs #124. Best score 1001 bits
Score difference with first non-orthologous sequence - C.intestinalis:732 D.pseudoobscura:724

F7A1V5              	100.00%		Q29MP0              	100.00%
Bootstrap support for F7A1V5 as seed ortholog is 100%.
Bootstrap support for Q29MP0 as seed ortholog is 100%.

Group of orthologs #125. Best score 998 bits
Score difference with first non-orthologous sequence - C.intestinalis:998 D.pseudoobscura:998

F6Z5E6              	100.00%		B5DWR6              	100.00%
                    	       		Q29DF2              	66.84%
                    	       		B5DLI0              	11.60%
Bootstrap support for F6Z5E6 as seed ortholog is 100%.
Bootstrap support for B5DWR6 as seed ortholog is 100%.

Group of orthologs #126. Best score 998 bits
Score difference with first non-orthologous sequence - C.intestinalis:998 D.pseudoobscura:998

F6SBF1              	100.00%		Q28XX1              	100.00%
Bootstrap support for F6SBF1 as seed ortholog is 100%.
Bootstrap support for Q28XX1 as seed ortholog is 100%.

Group of orthologs #127. Best score 998 bits
Score difference with first non-orthologous sequence - C.intestinalis:998 D.pseudoobscura:895

F6RZ17              	100.00%		Q2LYL7              	100.00%
Bootstrap support for F6RZ17 as seed ortholog is 100%.
Bootstrap support for Q2LYL7 as seed ortholog is 100%.

Group of orthologs #128. Best score 993 bits
Score difference with first non-orthologous sequence - C.intestinalis:456 D.pseudoobscura:448

H2XU53              	100.00%		Q28X59              	100.00%
Bootstrap support for H2XU53 as seed ortholog is 100%.
Bootstrap support for Q28X59 as seed ortholog is 100%.

Group of orthologs #129. Best score 991 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 D.pseudoobscura:411

F6USW1              	100.00%		Q29I60              	100.00%
                    	       		B5DPN7              	13.89%
Bootstrap support for F6USW1 as seed ortholog is 100%.
Bootstrap support for Q29I60 as seed ortholog is 100%.

Group of orthologs #130. Best score 988 bits
Score difference with first non-orthologous sequence - C.intestinalis:988 D.pseudoobscura:477

F6YY38              	100.00%		B5DIW2              	100.00%
Bootstrap support for F6YY38 as seed ortholog is 100%.
Bootstrap support for B5DIW2 as seed ortholog is 99%.

Group of orthologs #131. Best score 987 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 D.pseudoobscura:987

F6WKG4              	100.00%		Q29KF2              	100.00%
F6XBM6              	22.40%		
F7B363              	11.57%		
Bootstrap support for F6WKG4 as seed ortholog is 100%.
Bootstrap support for Q29KF2 as seed ortholog is 100%.

Group of orthologs #132. Best score 987 bits
Score difference with first non-orthologous sequence - C.intestinalis:987 D.pseudoobscura:987

F6QDE3              	100.00%		Q29EX5              	100.00%
Bootstrap support for F6QDE3 as seed ortholog is 100%.
Bootstrap support for Q29EX5 as seed ortholog is 100%.

Group of orthologs #133. Best score 986 bits
Score difference with first non-orthologous sequence - C.intestinalis:986 D.pseudoobscura:986

F6TQ69              	100.00%		Q29FE2              	100.00%
Bootstrap support for F6TQ69 as seed ortholog is 100%.
Bootstrap support for Q29FE2 as seed ortholog is 100%.

Group of orthologs #134. Best score 984 bits
Score difference with first non-orthologous sequence - C.intestinalis:984 D.pseudoobscura:534

F6S181              	100.00%		Q29N37              	100.00%
Bootstrap support for F6S181 as seed ortholog is 100%.
Bootstrap support for Q29N37 as seed ortholog is 100%.

Group of orthologs #135. Best score 981 bits
Score difference with first non-orthologous sequence - C.intestinalis:981 D.pseudoobscura:416

F6SH00              	100.00%		B5DH70              	100.00%
Bootstrap support for F6SH00 as seed ortholog is 100%.
Bootstrap support for B5DH70 as seed ortholog is 100%.

Group of orthologs #136. Best score 980 bits
Score difference with first non-orthologous sequence - C.intestinalis:980 D.pseudoobscura:163

F6R356              	100.00%		I5ANG6              	100.00%
Bootstrap support for F6R356 as seed ortholog is 100%.
Bootstrap support for I5ANG6 as seed ortholog is 99%.

Group of orthologs #137. Best score 978 bits
Score difference with first non-orthologous sequence - C.intestinalis:737 D.pseudoobscura:678

F6RKM9              	100.00%		Q29JI9              	100.00%
Bootstrap support for F6RKM9 as seed ortholog is 100%.
Bootstrap support for Q29JI9 as seed ortholog is 100%.

Group of orthologs #138. Best score 975 bits
Score difference with first non-orthologous sequence - C.intestinalis:975 D.pseudoobscura:975

F6XU15              	100.00%		B5DU70              	100.00%
Bootstrap support for F6XU15 as seed ortholog is 100%.
Bootstrap support for B5DU70 as seed ortholog is 100%.

Group of orthologs #139. Best score 972 bits
Score difference with first non-orthologous sequence - C.intestinalis:972 D.pseudoobscura:972

F6U7R9              	100.00%		B5DLH5              	100.00%
Bootstrap support for F6U7R9 as seed ortholog is 100%.
Bootstrap support for B5DLH5 as seed ortholog is 100%.

Group of orthologs #140. Best score 972 bits
Score difference with first non-orthologous sequence - C.intestinalis:688 D.pseudoobscura:705

F6UK45              	100.00%		Q291R3              	100.00%
Bootstrap support for F6UK45 as seed ortholog is 100%.
Bootstrap support for Q291R3 as seed ortholog is 100%.

Group of orthologs #141. Best score 967 bits
Score difference with first non-orthologous sequence - C.intestinalis:967 D.pseudoobscura:967

F6THF9              	100.00%		Q28X42              	100.00%
Bootstrap support for F6THF9 as seed ortholog is 100%.
Bootstrap support for Q28X42 as seed ortholog is 100%.

Group of orthologs #142. Best score 966 bits
Score difference with first non-orthologous sequence - C.intestinalis:705 D.pseudoobscura:110

F6S2T0              	100.00%		Q28X60              	100.00%
F6S2J4              	50.44%		
F6U3N6              	18.15%		
F6U4J4              	16.40%		
F6RZC1              	11.08%		
F6WVU8              	11.01%		
Bootstrap support for F6S2T0 as seed ortholog is 100%.
Bootstrap support for Q28X60 as seed ortholog is 89%.

Group of orthologs #143. Best score 966 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:240

F6T8N6              	100.00%		Q294S9              	100.00%
                    	       		B5DJ61              	48.49%
                    	       		B5DW27              	47.29%
                    	       		Q29N89              	39.32%
                    	       		Q29NR3              	36.97%
                    	       		B5DXT3              	6.33%
Bootstrap support for F6T8N6 as seed ortholog is 99%.
Bootstrap support for Q294S9 as seed ortholog is 99%.

Group of orthologs #144. Best score 965 bits
Score difference with first non-orthologous sequence - C.intestinalis:965 D.pseudoobscura:965

F7BIX8              	100.00%		Q29NX4              	100.00%
Bootstrap support for F7BIX8 as seed ortholog is 100%.
Bootstrap support for Q29NX4 as seed ortholog is 100%.

Group of orthologs #145. Best score 964 bits
Score difference with first non-orthologous sequence - C.intestinalis:964 D.pseudoobscura:544

F6R6F3              	100.00%		Q29IT7              	100.00%
Bootstrap support for F6R6F3 as seed ortholog is 100%.
Bootstrap support for Q29IT7 as seed ortholog is 100%.

Group of orthologs #146. Best score 964 bits
Score difference with first non-orthologous sequence - C.intestinalis:964 D.pseudoobscura:964

F6R4B5              	100.00%		Q29J51              	100.00%
Bootstrap support for F6R4B5 as seed ortholog is 100%.
Bootstrap support for Q29J51 as seed ortholog is 100%.

Group of orthologs #147. Best score 962 bits
Score difference with first non-orthologous sequence - C.intestinalis:962 D.pseudoobscura:962

F7BNC1              	100.00%		Q29P59              	100.00%
                    	       		B5DNJ9              	6.70%
Bootstrap support for F7BNC1 as seed ortholog is 100%.
Bootstrap support for Q29P59 as seed ortholog is 100%.

Group of orthologs #148. Best score 961 bits
Score difference with first non-orthologous sequence - C.intestinalis:961 D.pseudoobscura:961

H2XV68              	100.00%		Q292D8              	100.00%
Bootstrap support for H2XV68 as seed ortholog is 100%.
Bootstrap support for Q292D8 as seed ortholog is 100%.

Group of orthologs #149. Best score 958 bits
Score difference with first non-orthologous sequence - C.intestinalis:958 D.pseudoobscura:602

F6ST44              	100.00%		Q29HK8              	100.00%
Bootstrap support for F6ST44 as seed ortholog is 100%.
Bootstrap support for Q29HK8 as seed ortholog is 100%.

Group of orthologs #150. Best score 956 bits
Score difference with first non-orthologous sequence - C.intestinalis:956 D.pseudoobscura:956

H2XQI5              	100.00%		Q29PN1              	100.00%
Bootstrap support for H2XQI5 as seed ortholog is 100%.
Bootstrap support for Q29PN1 as seed ortholog is 100%.

Group of orthologs #151. Best score 955 bits
Score difference with first non-orthologous sequence - C.intestinalis:955 D.pseudoobscura:955

F6Y8C3              	100.00%		Q29GS1              	100.00%
Bootstrap support for F6Y8C3 as seed ortholog is 100%.
Bootstrap support for Q29GS1 as seed ortholog is 100%.

Group of orthologs #152. Best score 952 bits
Score difference with first non-orthologous sequence - C.intestinalis:952 D.pseudoobscura:166

F6UKS5              	100.00%		I5ANT7              	100.00%
Bootstrap support for F6UKS5 as seed ortholog is 100%.
Bootstrap support for I5ANT7 as seed ortholog is 97%.

Group of orthologs #153. Best score 952 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 D.pseudoobscura:542

F7BGT4              	100.00%		Q29LM8              	100.00%
Bootstrap support for F7BGT4 as seed ortholog is 100%.
Bootstrap support for Q29LM8 as seed ortholog is 100%.

Group of orthologs #154. Best score 950 bits
Score difference with first non-orthologous sequence - C.intestinalis:859 D.pseudoobscura:856

F6XZ43              	100.00%		Q29F45              	100.00%
Bootstrap support for F6XZ43 as seed ortholog is 100%.
Bootstrap support for Q29F45 as seed ortholog is 100%.

Group of orthologs #155. Best score 948 bits
Score difference with first non-orthologous sequence - C.intestinalis:948 D.pseudoobscura:948

F6US09              	100.00%		Q29GX1              	100.00%
Bootstrap support for F6US09 as seed ortholog is 100%.
Bootstrap support for Q29GX1 as seed ortholog is 100%.

Group of orthologs #156. Best score 948 bits
Score difference with first non-orthologous sequence - C.intestinalis:948 D.pseudoobscura:472

F6XSF3              	100.00%		Q29AU1              	100.00%
Bootstrap support for F6XSF3 as seed ortholog is 100%.
Bootstrap support for Q29AU1 as seed ortholog is 100%.

Group of orthologs #157. Best score 946 bits
Score difference with first non-orthologous sequence - C.intestinalis:946 D.pseudoobscura:946

F6S7I2              	100.00%		Q29I31              	100.00%
Bootstrap support for F6S7I2 as seed ortholog is 100%.
Bootstrap support for Q29I31 as seed ortholog is 100%.

Group of orthologs #158. Best score 943 bits
Score difference with first non-orthologous sequence - C.intestinalis:943 D.pseudoobscura:943

F6SSI2              	100.00%		B5DS08              	100.00%
Bootstrap support for F6SSI2 as seed ortholog is 100%.
Bootstrap support for B5DS08 as seed ortholog is 100%.

Group of orthologs #159. Best score 941 bits
Score difference with first non-orthologous sequence - C.intestinalis:941 D.pseudoobscura:941

F6RMU1              	100.00%		Q29LW8              	100.00%
Bootstrap support for F6RMU1 as seed ortholog is 100%.
Bootstrap support for Q29LW8 as seed ortholog is 100%.

Group of orthologs #160. Best score 941 bits
Score difference with first non-orthologous sequence - C.intestinalis:695 D.pseudoobscura:633

F7AUJ3              	100.00%		Q29D32              	100.00%
Bootstrap support for F7AUJ3 as seed ortholog is 100%.
Bootstrap support for Q29D32 as seed ortholog is 100%.

Group of orthologs #161. Best score 938 bits
Score difference with first non-orthologous sequence - C.intestinalis:938 D.pseudoobscura:938

F6UE02              	100.00%		B5DKF4              	100.00%
Bootstrap support for F6UE02 as seed ortholog is 100%.
Bootstrap support for B5DKF4 as seed ortholog is 100%.

Group of orthologs #162. Best score 937 bits
Score difference with first non-orthologous sequence - C.intestinalis:937 D.pseudoobscura:937

F6SI05              	100.00%		Q29N74              	100.00%
Bootstrap support for F6SI05 as seed ortholog is 100%.
Bootstrap support for Q29N74 as seed ortholog is 100%.

Group of orthologs #163. Best score 936 bits
Score difference with first non-orthologous sequence - C.intestinalis:936 D.pseudoobscura:936

F6TZX4              	100.00%		Q29G56              	100.00%
Bootstrap support for F6TZX4 as seed ortholog is 100%.
Bootstrap support for Q29G56 as seed ortholog is 100%.

Group of orthologs #164. Best score 931 bits
Score difference with first non-orthologous sequence - C.intestinalis:931 D.pseudoobscura:931

F6Y1Q3              	100.00%		Q29LJ9              	100.00%
Bootstrap support for F6Y1Q3 as seed ortholog is 100%.
Bootstrap support for Q29LJ9 as seed ortholog is 100%.

Group of orthologs #165. Best score 930 bits
Score difference with first non-orthologous sequence - C.intestinalis:930 D.pseudoobscura:930

F6SFQ0              	100.00%		B5DH42              	100.00%
Bootstrap support for F6SFQ0 as seed ortholog is 100%.
Bootstrap support for B5DH42 as seed ortholog is 100%.

Group of orthologs #166. Best score 926 bits
Score difference with first non-orthologous sequence - C.intestinalis:926 D.pseudoobscura:926

F6TCT1              	100.00%		Q29N79              	100.00%
Bootstrap support for F6TCT1 as seed ortholog is 100%.
Bootstrap support for Q29N79 as seed ortholog is 100%.

Group of orthologs #167. Best score 925 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 D.pseudoobscura:597

F6Z4G6              	100.00%		Q29GC2              	100.00%
Bootstrap support for F6Z4G6 as seed ortholog is 100%.
Bootstrap support for Q29GC2 as seed ortholog is 100%.

Group of orthologs #168. Best score 925 bits
Score difference with first non-orthologous sequence - C.intestinalis:925 D.pseudoobscura:925

H2XL55              	100.00%		Q297C3              	100.00%
Bootstrap support for H2XL55 as seed ortholog is 100%.
Bootstrap support for Q297C3 as seed ortholog is 100%.

Group of orthologs #169. Best score 923 bits
Score difference with first non-orthologous sequence - C.intestinalis:923 D.pseudoobscura:923

F6YGJ7              	100.00%		Q29HL8              	100.00%
Bootstrap support for F6YGJ7 as seed ortholog is 100%.
Bootstrap support for Q29HL8 as seed ortholog is 100%.

Group of orthologs #170. Best score 921 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 D.pseudoobscura:437

F6Q9K0              	100.00%		Q28Z57              	100.00%
Bootstrap support for F6Q9K0 as seed ortholog is 99%.
Bootstrap support for Q28Z57 as seed ortholog is 100%.

Group of orthologs #171. Best score 920 bits
Score difference with first non-orthologous sequence - C.intestinalis:920 D.pseudoobscura:920

H2XJF2              	100.00%		Q28ZE7              	100.00%
Bootstrap support for H2XJF2 as seed ortholog is 100%.
Bootstrap support for Q28ZE7 as seed ortholog is 100%.

Group of orthologs #172. Best score 920 bits
Score difference with first non-orthologous sequence - C.intestinalis:920 D.pseudoobscura:920

H2Y089              	100.00%		Q293D0              	100.00%
Bootstrap support for H2Y089 as seed ortholog is 100%.
Bootstrap support for Q293D0 as seed ortholog is 100%.

Group of orthologs #173. Best score 917 bits
Score difference with first non-orthologous sequence - C.intestinalis:653 D.pseudoobscura:917

F6TV75              	100.00%		Q2M106              	100.00%
Bootstrap support for F6TV75 as seed ortholog is 100%.
Bootstrap support for Q2M106 as seed ortholog is 100%.

Group of orthologs #174. Best score 915 bits
Score difference with first non-orthologous sequence - C.intestinalis:915 D.pseudoobscura:915

F6PXA1              	100.00%		B5DU28              	100.00%
Bootstrap support for F6PXA1 as seed ortholog is 100%.
Bootstrap support for B5DU28 as seed ortholog is 100%.

Group of orthologs #175. Best score 913 bits
Score difference with first non-orthologous sequence - C.intestinalis:630 D.pseudoobscura:596

F6THL0              	100.00%		Q28YI1              	100.00%
Bootstrap support for F6THL0 as seed ortholog is 100%.
Bootstrap support for Q28YI1 as seed ortholog is 100%.

Group of orthologs #176. Best score 909 bits
Score difference with first non-orthologous sequence - C.intestinalis:909 D.pseudoobscura:909

H2XKA9              	100.00%		Q292S1              	100.00%
Bootstrap support for H2XKA9 as seed ortholog is 100%.
Bootstrap support for Q292S1 as seed ortholog is 100%.

Group of orthologs #177. Best score 908 bits
Score difference with first non-orthologous sequence - C.intestinalis:908 D.pseudoobscura:400

F6R8M3              	100.00%		Q29NP3              	100.00%
Bootstrap support for F6R8M3 as seed ortholog is 100%.
Bootstrap support for Q29NP3 as seed ortholog is 99%.

Group of orthologs #178. Best score 908 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 D.pseudoobscura:162

F6V2Z5              	100.00%		Q29MN4              	100.00%
Bootstrap support for F6V2Z5 as seed ortholog is 100%.
Bootstrap support for Q29MN4 as seed ortholog is 100%.

Group of orthologs #179. Best score 907 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 D.pseudoobscura:240

F6SJ24              	100.00%		Q294S5              	100.00%
F7B0Q2              	100.00%		
F6QB29              	72.22%		
Bootstrap support for F6SJ24 as seed ortholog is 78%.
Bootstrap support for F7B0Q2 as seed ortholog is 76%.
Bootstrap support for Q294S5 as seed ortholog is 100%.

Group of orthologs #180. Best score 905 bits
Score difference with first non-orthologous sequence - C.intestinalis:905 D.pseudoobscura:905

F6VGC6              	100.00%		Q29MU9              	100.00%
Bootstrap support for F6VGC6 as seed ortholog is 100%.
Bootstrap support for Q29MU9 as seed ortholog is 100%.

Group of orthologs #181. Best score 904 bits
Score difference with first non-orthologous sequence - C.intestinalis:904 D.pseudoobscura:904

F6TIJ9              	100.00%		Q29BZ7              	100.00%
                    	       		B5DXS7              	11.07%
Bootstrap support for F6TIJ9 as seed ortholog is 100%.
Bootstrap support for Q29BZ7 as seed ortholog is 100%.

Group of orthologs #182. Best score 904 bits
Score difference with first non-orthologous sequence - C.intestinalis:904 D.pseudoobscura:904

F6QRG3              	100.00%		Q29H62              	100.00%
Bootstrap support for F6QRG3 as seed ortholog is 100%.
Bootstrap support for Q29H62 as seed ortholog is 100%.

Group of orthologs #183. Best score 902 bits
Score difference with first non-orthologous sequence - C.intestinalis:902 D.pseudoobscura:902

F6PYU7              	100.00%		Q28ZD4              	100.00%
Bootstrap support for F6PYU7 as seed ortholog is 100%.
Bootstrap support for Q28ZD4 as seed ortholog is 100%.

Group of orthologs #184. Best score 900 bits
Score difference with first non-orthologous sequence - C.intestinalis:900 D.pseudoobscura:900

H2XTN7              	100.00%		Q2M0N5              	100.00%
Bootstrap support for H2XTN7 as seed ortholog is 100%.
Bootstrap support for Q2M0N5 as seed ortholog is 100%.

Group of orthologs #185. Best score 895 bits
Score difference with first non-orthologous sequence - C.intestinalis:506 D.pseudoobscura:469

F6YUT1              	100.00%		Q29FE8              	100.00%
Bootstrap support for F6YUT1 as seed ortholog is 100%.
Bootstrap support for Q29FE8 as seed ortholog is 100%.

Group of orthologs #186. Best score 894 bits
Score difference with first non-orthologous sequence - C.intestinalis:894 D.pseudoobscura:894

F6XHQ2              	100.00%		B5DIC2              	100.00%
Bootstrap support for F6XHQ2 as seed ortholog is 100%.
Bootstrap support for B5DIC2 as seed ortholog is 100%.

Group of orthologs #187. Best score 888 bits
Score difference with first non-orthologous sequence - C.intestinalis:888 D.pseudoobscura:888

F6VSQ8              	100.00%		Q2LZZ5              	100.00%
Bootstrap support for F6VSQ8 as seed ortholog is 100%.
Bootstrap support for Q2LZZ5 as seed ortholog is 100%.

Group of orthologs #188. Best score 886 bits
Score difference with first non-orthologous sequence - C.intestinalis:886 D.pseudoobscura:886

F6YNJ1              	100.00%		P04809              	100.00%
Bootstrap support for F6YNJ1 as seed ortholog is 100%.
Bootstrap support for P04809 as seed ortholog is 100%.

Group of orthologs #189. Best score 883 bits
Score difference with first non-orthologous sequence - C.intestinalis:883 D.pseudoobscura:883

H2XVV8              	100.00%		B5DRR3              	100.00%
Bootstrap support for H2XVV8 as seed ortholog is 100%.
Bootstrap support for B5DRR3 as seed ortholog is 100%.

Group of orthologs #190. Best score 883 bits
Score difference with first non-orthologous sequence - C.intestinalis:557 D.pseudoobscura:883

H2XSM0              	100.00%		Q29JY3              	100.00%
Bootstrap support for H2XSM0 as seed ortholog is 100%.
Bootstrap support for Q29JY3 as seed ortholog is 100%.

Group of orthologs #191. Best score 882 bits
Score difference with first non-orthologous sequence - C.intestinalis:504 D.pseudoobscura:6

L7N0T3              	100.00%		B5DUR1              	100.00%
F6SYL0              	70.97%		
Bootstrap support for L7N0T3 as seed ortholog is 100%.
Bootstrap support for B5DUR1 as seed ortholog is 75%.

Group of orthologs #192. Best score 881 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 D.pseudoobscura:881

H2Y0Q1              	100.00%		Q28Z54              	100.00%
Bootstrap support for H2Y0Q1 as seed ortholog is 100%.
Bootstrap support for Q28Z54 as seed ortholog is 100%.

Group of orthologs #193. Best score 879 bits
Score difference with first non-orthologous sequence - C.intestinalis:879 D.pseudoobscura:879

F6SWL4              	100.00%		Q296N6              	100.00%
Bootstrap support for F6SWL4 as seed ortholog is 100%.
Bootstrap support for Q296N6 as seed ortholog is 100%.

Group of orthologs #194. Best score 879 bits
Score difference with first non-orthologous sequence - C.intestinalis:879 D.pseudoobscura:879

F6ZZL8              	100.00%		Q29P18              	100.00%
Bootstrap support for F6ZZL8 as seed ortholog is 100%.
Bootstrap support for Q29P18 as seed ortholog is 100%.

Group of orthologs #195. Best score 878 bits
Score difference with first non-orthologous sequence - C.intestinalis:878 D.pseudoobscura:455

F6WRK8              	100.00%		Q28YI2              	100.00%
Bootstrap support for F6WRK8 as seed ortholog is 100%.
Bootstrap support for Q28YI2 as seed ortholog is 100%.

Group of orthologs #196. Best score 877 bits
Score difference with first non-orthologous sequence - C.intestinalis:877 D.pseudoobscura:877

H2XNX0              	100.00%		Q29KZ6              	100.00%
Bootstrap support for H2XNX0 as seed ortholog is 100%.
Bootstrap support for Q29KZ6 as seed ortholog is 100%.

Group of orthologs #197. Best score 874 bits
Score difference with first non-orthologous sequence - C.intestinalis:874 D.pseudoobscura:874

F6VC80              	100.00%		Q29AH0              	100.00%
                    	       		I5APL2              	49.26%
Bootstrap support for F6VC80 as seed ortholog is 100%.
Bootstrap support for Q29AH0 as seed ortholog is 100%.

Group of orthologs #198. Best score 874 bits
Score difference with first non-orthologous sequence - C.intestinalis:874 D.pseudoobscura:475

F6ZIS0              	100.00%		Q292T1              	100.00%
Bootstrap support for F6ZIS0 as seed ortholog is 100%.
Bootstrap support for Q292T1 as seed ortholog is 99%.

Group of orthologs #199. Best score 874 bits
Score difference with first non-orthologous sequence - C.intestinalis:874 D.pseudoobscura:874

F7B997              	100.00%		Q28X64              	100.00%
Bootstrap support for F7B997 as seed ortholog is 100%.
Bootstrap support for Q28X64 as seed ortholog is 100%.

Group of orthologs #200. Best score 873 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 D.pseudoobscura:550

F6YBA5              	100.00%		Q29JL1              	100.00%
Bootstrap support for F6YBA5 as seed ortholog is 100%.
Bootstrap support for Q29JL1 as seed ortholog is 100%.

Group of orthologs #201. Best score 872 bits
Score difference with first non-orthologous sequence - C.intestinalis:872 D.pseudoobscura:872

F6S399              	100.00%		Q296L9              	100.00%
Bootstrap support for F6S399 as seed ortholog is 100%.
Bootstrap support for Q296L9 as seed ortholog is 100%.

Group of orthologs #202. Best score 868 bits
Score difference with first non-orthologous sequence - C.intestinalis:868 D.pseudoobscura:868

F6W453              	100.00%		Q29FG9              	100.00%
Bootstrap support for F6W453 as seed ortholog is 100%.
Bootstrap support for Q29FG9 as seed ortholog is 100%.

Group of orthologs #203. Best score 868 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 D.pseudoobscura:778

F7B0S6              	100.00%		Q2LYQ0              	100.00%
Bootstrap support for F7B0S6 as seed ortholog is 100%.
Bootstrap support for Q2LYQ0 as seed ortholog is 100%.

Group of orthologs #204. Best score 867 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 D.pseudoobscura:327

F6QVH1              	100.00%		Q29CK8              	100.00%
Bootstrap support for F6QVH1 as seed ortholog is 100%.
Bootstrap support for Q29CK8 as seed ortholog is 100%.

Group of orthologs #205. Best score 867 bits
Score difference with first non-orthologous sequence - C.intestinalis:867 D.pseudoobscura:867

H2XZM7              	100.00%		Q29BG7              	100.00%
Bootstrap support for H2XZM7 as seed ortholog is 100%.
Bootstrap support for Q29BG7 as seed ortholog is 100%.

Group of orthologs #206. Best score 864 bits
Score difference with first non-orthologous sequence - C.intestinalis:864 D.pseudoobscura:864

F6XQM9              	100.00%		I5AP61              	100.00%
Bootstrap support for F6XQM9 as seed ortholog is 100%.
Bootstrap support for I5AP61 as seed ortholog is 100%.

Group of orthologs #207. Best score 864 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 D.pseudoobscura:418

F6SM21              	100.00%		Q2M0J9              	100.00%
Bootstrap support for F6SM21 as seed ortholog is 100%.
Bootstrap support for Q2M0J9 as seed ortholog is 100%.

Group of orthologs #208. Best score 864 bits
Score difference with first non-orthologous sequence - C.intestinalis:864 D.pseudoobscura:864

H2Y0S6              	100.00%		B5DPM6              	100.00%
Bootstrap support for H2Y0S6 as seed ortholog is 100%.
Bootstrap support for B5DPM6 as seed ortholog is 100%.

Group of orthologs #209. Best score 862 bits
Score difference with first non-orthologous sequence - C.intestinalis:862 D.pseudoobscura:862

F6XY03              	100.00%		Q29AG0              	100.00%
Bootstrap support for F6XY03 as seed ortholog is 100%.
Bootstrap support for Q29AG0 as seed ortholog is 100%.

Group of orthologs #210. Best score 860 bits
Score difference with first non-orthologous sequence - C.intestinalis:766 D.pseudoobscura:723

F7A8C2              	100.00%		Q29BS3              	100.00%
Bootstrap support for F7A8C2 as seed ortholog is 100%.
Bootstrap support for Q29BS3 as seed ortholog is 100%.

Group of orthologs #211. Best score 858 bits
Score difference with first non-orthologous sequence - C.intestinalis:858 D.pseudoobscura:791

F6W785              	100.00%		Q299N6              	100.00%
Bootstrap support for F6W785 as seed ortholog is 100%.
Bootstrap support for Q299N6 as seed ortholog is 100%.

Group of orthologs #212. Best score 854 bits
Score difference with first non-orthologous sequence - C.intestinalis:854 D.pseudoobscura:557

F6PW28              	100.00%		Q28YB0              	100.00%
Bootstrap support for F6PW28 as seed ortholog is 100%.
Bootstrap support for Q28YB0 as seed ortholog is 100%.

Group of orthologs #213. Best score 854 bits
Score difference with first non-orthologous sequence - C.intestinalis:854 D.pseudoobscura:854

F6YYE4              	100.00%		Q291E9              	100.00%
Bootstrap support for F6YYE4 as seed ortholog is 100%.
Bootstrap support for Q291E9 as seed ortholog is 100%.

Group of orthologs #214. Best score 854 bits
Score difference with first non-orthologous sequence - C.intestinalis:516 D.pseudoobscura:419

Q1RL48              	100.00%		Q29D96              	100.00%
Bootstrap support for Q1RL48 as seed ortholog is 100%.
Bootstrap support for Q29D96 as seed ortholog is 100%.

Group of orthologs #215. Best score 850 bits
Score difference with first non-orthologous sequence - C.intestinalis:850 D.pseudoobscura:850

F6U4L6              	100.00%		Q299C3              	100.00%
Bootstrap support for F6U4L6 as seed ortholog is 100%.
Bootstrap support for Q299C3 as seed ortholog is 100%.

Group of orthologs #216. Best score 846 bits
Score difference with first non-orthologous sequence - C.intestinalis:846 D.pseudoobscura:661

F6R472              	100.00%		Q29KT9              	100.00%
Bootstrap support for F6R472 as seed ortholog is 100%.
Bootstrap support for Q29KT9 as seed ortholog is 100%.

Group of orthologs #217. Best score 842 bits
Score difference with first non-orthologous sequence - C.intestinalis:842 D.pseudoobscura:180

F6XQ16              	100.00%		Q290K1              	100.00%
Bootstrap support for F6XQ16 as seed ortholog is 100%.
Bootstrap support for Q290K1 as seed ortholog is 99%.

Group of orthologs #218. Best score 841 bits
Score difference with first non-orthologous sequence - C.intestinalis:841 D.pseudoobscura:841

F7BBW9              	100.00%		Q29FR7              	100.00%
Bootstrap support for F7BBW9 as seed ortholog is 100%.
Bootstrap support for Q29FR7 as seed ortholog is 100%.

Group of orthologs #219. Best score 840 bits
Score difference with first non-orthologous sequence - C.intestinalis:840 D.pseudoobscura:654

F6UKC4              	100.00%		Q29N77              	100.00%
Bootstrap support for F6UKC4 as seed ortholog is 100%.
Bootstrap support for Q29N77 as seed ortholog is 100%.

Group of orthologs #220. Best score 838 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 D.pseudoobscura:838

F6S6B2              	100.00%		B5DNH4              	100.00%
Bootstrap support for F6S6B2 as seed ortholog is 100%.
Bootstrap support for B5DNH4 as seed ortholog is 100%.

Group of orthologs #221. Best score 837 bits
Score difference with first non-orthologous sequence - C.intestinalis:658 D.pseudoobscura:705

F6W8K8              	100.00%		Q29DM1              	100.00%
Bootstrap support for F6W8K8 as seed ortholog is 100%.
Bootstrap support for Q29DM1 as seed ortholog is 100%.

Group of orthologs #222. Best score 837 bits
Score difference with first non-orthologous sequence - C.intestinalis:570 D.pseudoobscura:837

F7AJ84              	100.00%		Q29JE9              	100.00%
Bootstrap support for F7AJ84 as seed ortholog is 100%.
Bootstrap support for Q29JE9 as seed ortholog is 100%.

Group of orthologs #223. Best score 836 bits
Score difference with first non-orthologous sequence - C.intestinalis:836 D.pseudoobscura:836

F6ZZF2              	100.00%		Q28ZU4              	100.00%
                    	       		Q28ZU3              	28.02%
Bootstrap support for F6ZZF2 as seed ortholog is 100%.
Bootstrap support for Q28ZU4 as seed ortholog is 100%.

Group of orthologs #224. Best score 836 bits
Score difference with first non-orthologous sequence - C.intestinalis:836 D.pseudoobscura:646

F6PKA1              	100.00%		B5DK76              	100.00%
Bootstrap support for F6PKA1 as seed ortholog is 100%.
Bootstrap support for B5DK76 as seed ortholog is 100%.

Group of orthologs #225. Best score 835 bits
Score difference with first non-orthologous sequence - C.intestinalis:835 D.pseudoobscura:835

F7AX97              	100.00%		Q28Z99              	100.00%
Bootstrap support for F7AX97 as seed ortholog is 100%.
Bootstrap support for Q28Z99 as seed ortholog is 100%.

Group of orthologs #226. Best score 834 bits
Score difference with first non-orthologous sequence - C.intestinalis:834 D.pseudoobscura:834

F6XQ09              	100.00%		Q29CG0              	100.00%
Bootstrap support for F6XQ09 as seed ortholog is 100%.
Bootstrap support for Q29CG0 as seed ortholog is 100%.

Group of orthologs #227. Best score 832 bits
Score difference with first non-orthologous sequence - C.intestinalis:832 D.pseudoobscura:470

F6PQW3              	100.00%		Q29IY8              	100.00%
Bootstrap support for F6PQW3 as seed ortholog is 100%.
Bootstrap support for Q29IY8 as seed ortholog is 100%.

Group of orthologs #228. Best score 828 bits
Score difference with first non-orthologous sequence - C.intestinalis:828 D.pseudoobscura:828

F6YQL6              	100.00%		Q29K48              	100.00%
Bootstrap support for F6YQL6 as seed ortholog is 100%.
Bootstrap support for Q29K48 as seed ortholog is 100%.

Group of orthologs #229. Best score 825 bits
Score difference with first non-orthologous sequence - C.intestinalis:825 D.pseudoobscura:323

F6ZBB5              	100.00%		Q28WL2              	100.00%
Bootstrap support for F6ZBB5 as seed ortholog is 100%.
Bootstrap support for Q28WL2 as seed ortholog is 100%.

Group of orthologs #230. Best score 824 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 D.pseudoobscura:494

F6X189              	100.00%		Q2LZN3              	100.00%
Bootstrap support for F6X189 as seed ortholog is 100%.
Bootstrap support for Q2LZN3 as seed ortholog is 100%.

Group of orthologs #231. Best score 823 bits
Score difference with first non-orthologous sequence - C.intestinalis:823 D.pseudoobscura:623

F6YGU8              	100.00%		Q29GK5              	100.00%
Bootstrap support for F6YGU8 as seed ortholog is 100%.
Bootstrap support for Q29GK5 as seed ortholog is 100%.

Group of orthologs #232. Best score 822 bits
Score difference with first non-orthologous sequence - C.intestinalis:730 D.pseudoobscura:822

F6U3T3              	100.00%		Q29JG0              	100.00%
Bootstrap support for F6U3T3 as seed ortholog is 100%.
Bootstrap support for Q29JG0 as seed ortholog is 100%.

Group of orthologs #233. Best score 821 bits
Score difference with first non-orthologous sequence - C.intestinalis:821 D.pseudoobscura:821

F6ZZJ8              	100.00%		B5E0I2              	100.00%
Bootstrap support for F6ZZJ8 as seed ortholog is 100%.
Bootstrap support for B5E0I2 as seed ortholog is 100%.

Group of orthologs #234. Best score 819 bits
Score difference with first non-orthologous sequence - C.intestinalis:819 D.pseudoobscura:762

F6QZB5              	100.00%		Q29AN7              	100.00%
Bootstrap support for F6QZB5 as seed ortholog is 100%.
Bootstrap support for Q29AN7 as seed ortholog is 100%.

Group of orthologs #235. Best score 817 bits
Score difference with first non-orthologous sequence - C.intestinalis:817 D.pseudoobscura:817

F6SI15              	100.00%		Q2M1A6              	100.00%
Bootstrap support for F6SI15 as seed ortholog is 100%.
Bootstrap support for Q2M1A6 as seed ortholog is 100%.

Group of orthologs #236. Best score 815 bits
Score difference with first non-orthologous sequence - C.intestinalis:815 D.pseudoobscura:815

F6TF50              	100.00%		B5DHY2              	100.00%
Bootstrap support for F6TF50 as seed ortholog is 100%.
Bootstrap support for B5DHY2 as seed ortholog is 100%.

Group of orthologs #237. Best score 814 bits
Score difference with first non-orthologous sequence - C.intestinalis:814 D.pseudoobscura:814

F6XUP6              	100.00%		Q29GL8              	100.00%
                    	       		Q29GL9              	44.82%
Bootstrap support for F6XUP6 as seed ortholog is 100%.
Bootstrap support for Q29GL8 as seed ortholog is 100%.

Group of orthologs #238. Best score 813 bits
Score difference with first non-orthologous sequence - C.intestinalis:813 D.pseudoobscura:813

F6SI53              	100.00%		Q292E4              	100.00%
                    	       		Q2M0Z6              	7.44%
Bootstrap support for F6SI53 as seed ortholog is 100%.
Bootstrap support for Q292E4 as seed ortholog is 100%.

Group of orthologs #239. Best score 813 bits
Score difference with first non-orthologous sequence - C.intestinalis:813 D.pseudoobscura:813

F6WFB4              	100.00%		Q29FH2              	100.00%
Bootstrap support for F6WFB4 as seed ortholog is 100%.
Bootstrap support for Q29FH2 as seed ortholog is 100%.

Group of orthologs #240. Best score 811 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 D.pseudoobscura:811

F6VRU1              	100.00%		Q29NA3              	100.00%
Bootstrap support for F6VRU1 as seed ortholog is 100%.
Bootstrap support for Q29NA3 as seed ortholog is 100%.

Group of orthologs #241. Best score 807 bits
Score difference with first non-orthologous sequence - C.intestinalis:807 D.pseudoobscura:222

F6WTE3              	100.00%		B5DL96              	100.00%
                    	       		B5DJP5              	35.07%
Bootstrap support for F6WTE3 as seed ortholog is 100%.
Bootstrap support for B5DL96 as seed ortholog is 100%.

Group of orthologs #242. Best score 805 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 D.pseudoobscura:805

F6PMK8              	100.00%		Q29KX9              	100.00%
Bootstrap support for F6PMK8 as seed ortholog is 100%.
Bootstrap support for Q29KX9 as seed ortholog is 100%.

Group of orthologs #243. Best score 800 bits
Score difference with first non-orthologous sequence - C.intestinalis:552 D.pseudoobscura:471

F7BA18              	100.00%		Q297H0              	100.00%
Bootstrap support for F7BA18 as seed ortholog is 100%.
Bootstrap support for Q297H0 as seed ortholog is 100%.

Group of orthologs #244. Best score 799 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:677

F6V1Q0              	100.00%		Q299F2              	100.00%
Bootstrap support for F6V1Q0 as seed ortholog is 100%.
Bootstrap support for Q299F2 as seed ortholog is 100%.

Group of orthologs #245. Best score 798 bits
Score difference with first non-orthologous sequence - C.intestinalis:511 D.pseudoobscura:297

F6UGA6              	100.00%		Q29LW7              	100.00%
Bootstrap support for F6UGA6 as seed ortholog is 100%.
Bootstrap support for Q29LW7 as seed ortholog is 100%.

Group of orthologs #246. Best score 797 bits
Score difference with first non-orthologous sequence - C.intestinalis:797 D.pseudoobscura:701

F6QX34              	100.00%		Q293E0              	100.00%
Bootstrap support for F6QX34 as seed ortholog is 100%.
Bootstrap support for Q293E0 as seed ortholog is 100%.

Group of orthologs #247. Best score 796 bits
Score difference with first non-orthologous sequence - C.intestinalis:796 D.pseudoobscura:796

F6ZM86              	100.00%		Q29PD8              	100.00%
Bootstrap support for F6ZM86 as seed ortholog is 100%.
Bootstrap support for Q29PD8 as seed ortholog is 100%.

Group of orthologs #248. Best score 794 bits
Score difference with first non-orthologous sequence - C.intestinalis:794 D.pseudoobscura:794

F6UQ90              	100.00%		Q29CK6              	100.00%
Bootstrap support for F6UQ90 as seed ortholog is 100%.
Bootstrap support for Q29CK6 as seed ortholog is 100%.

Group of orthologs #249. Best score 790 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 D.pseudoobscura:790

F6QSR3              	100.00%		Q29IV8              	100.00%
Bootstrap support for F6QSR3 as seed ortholog is 100%.
Bootstrap support for Q29IV8 as seed ortholog is 100%.

Group of orthologs #250. Best score 790 bits
Score difference with first non-orthologous sequence - C.intestinalis:790 D.pseudoobscura:790

F6XJ08              	100.00%		Q29G05              	100.00%
Bootstrap support for F6XJ08 as seed ortholog is 100%.
Bootstrap support for Q29G05 as seed ortholog is 100%.

Group of orthologs #251. Best score 789 bits
Score difference with first non-orthologous sequence - C.intestinalis:707 D.pseudoobscura:225

F6Z8I3              	100.00%		Q294C5              	100.00%
Bootstrap support for F6Z8I3 as seed ortholog is 100%.
Bootstrap support for Q294C5 as seed ortholog is 100%.

Group of orthologs #252. Best score 789 bits
Score difference with first non-orthologous sequence - C.intestinalis:789 D.pseudoobscura:789

F7BJC2              	100.00%		Q29HW0              	100.00%
Bootstrap support for F7BJC2 as seed ortholog is 100%.
Bootstrap support for Q29HW0 as seed ortholog is 100%.

Group of orthologs #253. Best score 788 bits
Score difference with first non-orthologous sequence - C.intestinalis:702 D.pseudoobscura:686

F6WIG7              	100.00%		Q298E2              	100.00%
Bootstrap support for F6WIG7 as seed ortholog is 100%.
Bootstrap support for Q298E2 as seed ortholog is 100%.

Group of orthologs #254. Best score 788 bits
Score difference with first non-orthologous sequence - C.intestinalis:788 D.pseudoobscura:788

F6Q9P9              	100.00%		Q2M196              	100.00%
Bootstrap support for F6Q9P9 as seed ortholog is 100%.
Bootstrap support for Q2M196 as seed ortholog is 100%.

Group of orthologs #255. Best score 788 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 D.pseudoobscura:687

F7AXJ1              	100.00%		Q29IA7              	100.00%
Bootstrap support for F7AXJ1 as seed ortholog is 100%.
Bootstrap support for Q29IA7 as seed ortholog is 100%.

Group of orthologs #256. Best score 787 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 D.pseudoobscura:660

F6T1J8              	100.00%		Q29JN6              	100.00%
Bootstrap support for F6T1J8 as seed ortholog is 100%.
Bootstrap support for Q29JN6 as seed ortholog is 100%.

Group of orthologs #257. Best score 787 bits
Score difference with first non-orthologous sequence - C.intestinalis:787 D.pseudoobscura:698

H2XVY7              	100.00%		Q298V2              	100.00%
Bootstrap support for H2XVY7 as seed ortholog is 100%.
Bootstrap support for Q298V2 as seed ortholog is 100%.

Group of orthologs #258. Best score 786 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:684

L7N0S7              	100.00%		Q291N3              	100.00%
Bootstrap support for L7N0S7 as seed ortholog is 100%.
Bootstrap support for Q291N3 as seed ortholog is 100%.

Group of orthologs #259. Best score 785 bits
Score difference with first non-orthologous sequence - C.intestinalis:785 D.pseudoobscura:463

F6PZ06              	100.00%		I5APZ7              	100.00%
Bootstrap support for F6PZ06 as seed ortholog is 100%.
Bootstrap support for I5APZ7 as seed ortholog is 100%.

Group of orthologs #260. Best score 783 bits
Score difference with first non-orthologous sequence - C.intestinalis:783 D.pseudoobscura:783

F6SSP0              	100.00%		B5DN54              	100.00%
Bootstrap support for F6SSP0 as seed ortholog is 100%.
Bootstrap support for B5DN54 as seed ortholog is 100%.

Group of orthologs #261. Best score 783 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 D.pseudoobscura:301

F6PPP8              	100.00%		Q2LYI9              	100.00%
Bootstrap support for F6PPP8 as seed ortholog is 100%.
Bootstrap support for Q2LYI9 as seed ortholog is 100%.

Group of orthologs #262. Best score 783 bits
Score difference with first non-orthologous sequence - C.intestinalis:783 D.pseudoobscura:783

F7B6E8              	100.00%		Q29A03              	100.00%
Bootstrap support for F7B6E8 as seed ortholog is 100%.
Bootstrap support for Q29A03 as seed ortholog is 100%.

Group of orthologs #263. Best score 783 bits
Score difference with first non-orthologous sequence - C.intestinalis:533 D.pseudoobscura:528

Q1RPW7              	100.00%		I7LAZ0              	100.00%
Bootstrap support for Q1RPW7 as seed ortholog is 100%.
Bootstrap support for I7LAZ0 as seed ortholog is 100%.

Group of orthologs #264. Best score 781 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 D.pseudoobscura:632

H2Y3E7              	100.00%		Q29KH2              	100.00%
Bootstrap support for H2Y3E7 as seed ortholog is 100%.
Bootstrap support for Q29KH2 as seed ortholog is 100%.

Group of orthologs #265. Best score 780 bits
Score difference with first non-orthologous sequence - C.intestinalis:780 D.pseudoobscura:780

F6PKJ4              	100.00%		Q29G82              	100.00%
Bootstrap support for F6PKJ4 as seed ortholog is 100%.
Bootstrap support for Q29G82 as seed ortholog is 100%.

Group of orthologs #266. Best score 780 bits
Score difference with first non-orthologous sequence - C.intestinalis:780 D.pseudoobscura:780

F7APA8              	100.00%		Q28WJ7              	100.00%
Bootstrap support for F7APA8 as seed ortholog is 100%.
Bootstrap support for Q28WJ7 as seed ortholog is 100%.

Group of orthologs #267. Best score 780 bits
Score difference with first non-orthologous sequence - C.intestinalis:780 D.pseudoobscura:780

F6ZRN0              	100.00%		Q290W3              	100.00%
Bootstrap support for F6ZRN0 as seed ortholog is 100%.
Bootstrap support for Q290W3 as seed ortholog is 100%.

Group of orthologs #268. Best score 779 bits
Score difference with first non-orthologous sequence - C.intestinalis:779 D.pseudoobscura:779

F6QB99              	100.00%		Q28Z03              	100.00%
Bootstrap support for F6QB99 as seed ortholog is 100%.
Bootstrap support for Q28Z03 as seed ortholog is 100%.

Group of orthologs #269. Best score 779 bits
Score difference with first non-orthologous sequence - C.intestinalis:779 D.pseudoobscura:779

F6VBU5              	100.00%		Q29FC0              	100.00%
Bootstrap support for F6VBU5 as seed ortholog is 100%.
Bootstrap support for Q29FC0 as seed ortholog is 100%.

Group of orthologs #270. Best score 775 bits
Score difference with first non-orthologous sequence - C.intestinalis:775 D.pseudoobscura:775

F6QSK8              	100.00%		B5DLV3              	100.00%
Bootstrap support for F6QSK8 as seed ortholog is 100%.
Bootstrap support for B5DLV3 as seed ortholog is 100%.

Group of orthologs #271. Best score 775 bits
Score difference with first non-orthologous sequence - C.intestinalis:775 D.pseudoobscura:775

F6VCH9              	100.00%		Q29ES0              	100.00%
Bootstrap support for F6VCH9 as seed ortholog is 100%.
Bootstrap support for Q29ES0 as seed ortholog is 100%.

Group of orthologs #272. Best score 775 bits
Score difference with first non-orthologous sequence - C.intestinalis:775 D.pseudoobscura:775

F6XL93              	100.00%		Q2LZ95              	100.00%
Bootstrap support for F6XL93 as seed ortholog is 100%.
Bootstrap support for Q2LZ95 as seed ortholog is 100%.

Group of orthologs #273. Best score 772 bits
Score difference with first non-orthologous sequence - C.intestinalis:772 D.pseudoobscura:772

F6V5U6              	100.00%		Q2M197              	100.00%
Bootstrap support for F6V5U6 as seed ortholog is 100%.
Bootstrap support for Q2M197 as seed ortholog is 100%.

Group of orthologs #274. Best score 770 bits
Score difference with first non-orthologous sequence - C.intestinalis:770 D.pseudoobscura:697

F7B8G8              	100.00%		Q294I9              	100.00%
Bootstrap support for F7B8G8 as seed ortholog is 100%.
Bootstrap support for Q294I9 as seed ortholog is 100%.

Group of orthologs #275. Best score 769 bits
Score difference with first non-orthologous sequence - C.intestinalis:769 D.pseudoobscura:769

F6YQS6              	100.00%		B5DN26              	100.00%
Bootstrap support for F6YQS6 as seed ortholog is 100%.
Bootstrap support for B5DN26 as seed ortholog is 100%.

Group of orthologs #276. Best score 768 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 D.pseudoobscura:648

F6ZIF2              	100.00%		Q28XB6              	100.00%
H2XSX9              	100.00%		Q297R9              	100.00%
H2XZ08              	6.88%		
Bootstrap support for F6ZIF2 as seed ortholog is 68%.
Alternative seed ortholog is F6ZID9 (25 bits away from this cluster)
Bootstrap support for H2XSX9 as seed ortholog is 57%.
Alternative seed ortholog is F6ZID9 (25 bits away from this cluster)
Bootstrap support for Q28XB6 as seed ortholog is 100%.
Bootstrap support for Q297R9 as seed ortholog is 100%.

Group of orthologs #277. Best score 768 bits
Score difference with first non-orthologous sequence - C.intestinalis:768 D.pseudoobscura:500

F7AXL0              	100.00%		Q2M082              	100.00%
Bootstrap support for F7AXL0 as seed ortholog is 100%.
Bootstrap support for Q2M082 as seed ortholog is 99%.

Group of orthologs #278. Best score 765 bits
Score difference with first non-orthologous sequence - C.intestinalis:765 D.pseudoobscura:765

F7AEZ3              	100.00%		B5DHA0              	100.00%
Bootstrap support for F7AEZ3 as seed ortholog is 100%.
Bootstrap support for B5DHA0 as seed ortholog is 100%.

Group of orthologs #279. Best score 764 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 D.pseudoobscura:764

F7B9U5              	100.00%		Q292Y6              	100.00%
Bootstrap support for F7B9U5 as seed ortholog is 100%.
Bootstrap support for Q292Y6 as seed ortholog is 100%.

Group of orthologs #280. Best score 764 bits
Score difference with first non-orthologous sequence - C.intestinalis:764 D.pseudoobscura:393

F7A8M5              	100.00%		Q29F63              	100.00%
Bootstrap support for F7A8M5 as seed ortholog is 100%.
Bootstrap support for Q29F63 as seed ortholog is 100%.

Group of orthologs #281. Best score 763 bits
Score difference with first non-orthologous sequence - C.intestinalis:665 D.pseudoobscura:763

Q1RL50              	100.00%		Q28ZW8              	100.00%
Bootstrap support for Q1RL50 as seed ortholog is 100%.
Bootstrap support for Q28ZW8 as seed ortholog is 100%.

Group of orthologs #282. Best score 761 bits
Score difference with first non-orthologous sequence - C.intestinalis:706 D.pseudoobscura:761

F6T957              	100.00%		B5DHZ5              	100.00%
Bootstrap support for F6T957 as seed ortholog is 100%.
Bootstrap support for B5DHZ5 as seed ortholog is 100%.

Group of orthologs #283. Best score 759 bits
Score difference with first non-orthologous sequence - C.intestinalis:759 D.pseudoobscura:675

F7AVY6              	100.00%		Q29IE7              	100.00%
Bootstrap support for F7AVY6 as seed ortholog is 100%.
Bootstrap support for Q29IE7 as seed ortholog is 100%.

Group of orthologs #284. Best score 758 bits
Score difference with first non-orthologous sequence - C.intestinalis:758 D.pseudoobscura:625

F6UDW5              	100.00%		Q29G38              	100.00%
Bootstrap support for F6UDW5 as seed ortholog is 100%.
Bootstrap support for Q29G38 as seed ortholog is 100%.

Group of orthologs #285. Best score 758 bits
Score difference with first non-orthologous sequence - C.intestinalis:617 D.pseudoobscura:395

F6YTL6              	100.00%		Q298N1              	100.00%
Bootstrap support for F6YTL6 as seed ortholog is 100%.
Bootstrap support for Q298N1 as seed ortholog is 100%.

Group of orthologs #286. Best score 758 bits
Score difference with first non-orthologous sequence - C.intestinalis:615 D.pseudoobscura:512

H2XYB3              	100.00%		Q296Q1              	100.00%
Bootstrap support for H2XYB3 as seed ortholog is 100%.
Bootstrap support for Q296Q1 as seed ortholog is 100%.

Group of orthologs #287. Best score 756 bits
Score difference with first non-orthologous sequence - C.intestinalis:756 D.pseudoobscura:756

F6WA81              	100.00%		Q28WX8              	100.00%
Bootstrap support for F6WA81 as seed ortholog is 100%.
Bootstrap support for Q28WX8 as seed ortholog is 100%.

Group of orthologs #288. Best score 755 bits
Score difference with first non-orthologous sequence - C.intestinalis:755 D.pseudoobscura:755

F7APZ8              	100.00%		Q296I4              	100.00%
Bootstrap support for F7APZ8 as seed ortholog is 100%.
Bootstrap support for Q296I4 as seed ortholog is 100%.

Group of orthologs #289. Best score 755 bits
Score difference with first non-orthologous sequence - C.intestinalis:755 D.pseudoobscura:755

H2XQX5              	100.00%		Q292H1              	100.00%
Bootstrap support for H2XQX5 as seed ortholog is 100%.
Bootstrap support for Q292H1 as seed ortholog is 100%.

Group of orthologs #290. Best score 753 bits
Score difference with first non-orthologous sequence - C.intestinalis:664 D.pseudoobscura:68

F6TPR3              	100.00%		Q29CL2              	100.00%
Bootstrap support for F6TPR3 as seed ortholog is 100%.
Bootstrap support for Q29CL2 as seed ortholog is 98%.

Group of orthologs #291. Best score 752 bits
Score difference with first non-orthologous sequence - C.intestinalis:752 D.pseudoobscura:752

F6TC91              	100.00%		Q299Z8              	100.00%
Bootstrap support for F6TC91 as seed ortholog is 100%.
Bootstrap support for Q299Z8 as seed ortholog is 100%.

Group of orthologs #292. Best score 752 bits
Score difference with first non-orthologous sequence - C.intestinalis:752 D.pseudoobscura:752

F6UIE4              	100.00%		Q298U5              	100.00%
Bootstrap support for F6UIE4 as seed ortholog is 100%.
Bootstrap support for Q298U5 as seed ortholog is 100%.

Group of orthologs #293. Best score 751 bits
Score difference with first non-orthologous sequence - C.intestinalis:751 D.pseudoobscura:751

F6WPI9              	100.00%		Q295W4              	100.00%
Bootstrap support for F6WPI9 as seed ortholog is 100%.
Bootstrap support for Q295W4 as seed ortholog is 100%.

Group of orthologs #294. Best score 750 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 D.pseudoobscura:750

Q86SD3              	100.00%		B5DX68              	100.00%
Bootstrap support for Q86SD3 as seed ortholog is 100%.
Bootstrap support for B5DX68 as seed ortholog is 100%.

Group of orthologs #295. Best score 748 bits
Score difference with first non-orthologous sequence - C.intestinalis:748 D.pseudoobscura:748

F6SH99              	100.00%		Q298K8              	100.00%
Bootstrap support for F6SH99 as seed ortholog is 100%.
Bootstrap support for Q298K8 as seed ortholog is 100%.

Group of orthologs #296. Best score 747 bits
Score difference with first non-orthologous sequence - C.intestinalis:747 D.pseudoobscura:747

H2XPD0              	100.00%		Q293J1              	100.00%
                    	       		B5DXQ6              	91.91%
                    	       		Q293I9              	41.55%
                    	       		B5E0B2              	40.56%
                    	       		Q293I8              	39.96%
                    	       		Q293J0              	30.82%
Bootstrap support for H2XPD0 as seed ortholog is 100%.
Bootstrap support for Q293J1 as seed ortholog is 100%.

Group of orthologs #297. Best score 746 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 D.pseudoobscura:746

F6WPG2              	100.00%		Q299W8              	100.00%
Bootstrap support for F6WPG2 as seed ortholog is 100%.
Bootstrap support for Q299W8 as seed ortholog is 100%.

Group of orthologs #298. Best score 742 bits
Score difference with first non-orthologous sequence - C.intestinalis:742 D.pseudoobscura:742

F7BBN1              	100.00%		Q2LZZ4              	100.00%
Bootstrap support for F7BBN1 as seed ortholog is 100%.
Bootstrap support for Q2LZZ4 as seed ortholog is 100%.

Group of orthologs #299. Best score 741 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 D.pseudoobscura:23

A2SY09              	100.00%		Q29H46              	100.00%
                    	       		B5DZR8              	100.00%
                    	       		Q297Q8              	23.81%
                    	       		B5E159              	14.29%
                    	       		B5DVZ6              	9.52%
Bootstrap support for A2SY09 as seed ortholog is 82%.
Bootstrap support for Q29H46 as seed ortholog is 91%.
Bootstrap support for B5DZR8 as seed ortholog is 90%.

Group of orthologs #300. Best score 740 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 D.pseudoobscura:740

F6T2M3              	100.00%		Q29P21              	100.00%
F6TNY6              	9.20%		
Bootstrap support for F6T2M3 as seed ortholog is 95%.
Bootstrap support for Q29P21 as seed ortholog is 100%.

Group of orthologs #301. Best score 740 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 D.pseudoobscura:740

F6WF19              	100.00%		Q29GU5              	100.00%
Bootstrap support for F6WF19 as seed ortholog is 100%.
Bootstrap support for Q29GU5 as seed ortholog is 100%.

Group of orthologs #302. Best score 740 bits
Score difference with first non-orthologous sequence - C.intestinalis:740 D.pseudoobscura:740

F6TA53              	100.00%		Q2LYS5              	100.00%
Bootstrap support for F6TA53 as seed ortholog is 100%.
Bootstrap support for Q2LYS5 as seed ortholog is 100%.

Group of orthologs #303. Best score 739 bits
Score difference with first non-orthologous sequence - C.intestinalis:739 D.pseudoobscura:739

H2XTS9              	100.00%		Q294Z4              	100.00%
Bootstrap support for H2XTS9 as seed ortholog is 100%.
Bootstrap support for Q294Z4 as seed ortholog is 100%.

Group of orthologs #304. Best score 738 bits
Score difference with first non-orthologous sequence - C.intestinalis:738 D.pseudoobscura:661

F6W7I3              	100.00%		Q297K0              	100.00%
F6W7K5              	69.38%		
Bootstrap support for F6W7I3 as seed ortholog is 100%.
Bootstrap support for Q297K0 as seed ortholog is 100%.

Group of orthologs #305. Best score 737 bits
Score difference with first non-orthologous sequence - C.intestinalis:737 D.pseudoobscura:737

F6RHH3              	100.00%		B5DZI1              	100.00%
Bootstrap support for F6RHH3 as seed ortholog is 100%.
Bootstrap support for B5DZI1 as seed ortholog is 100%.

Group of orthologs #306. Best score 737 bits
Score difference with first non-orthologous sequence - C.intestinalis:737 D.pseudoobscura:737

F6YIR9              	100.00%		Q292A7              	100.00%
Bootstrap support for F6YIR9 as seed ortholog is 100%.
Bootstrap support for Q292A7 as seed ortholog is 100%.

Group of orthologs #307. Best score 737 bits
Score difference with first non-orthologous sequence - C.intestinalis:737 D.pseudoobscura:737

H2Y2W2              	100.00%		Q28Y68              	100.00%
Bootstrap support for H2Y2W2 as seed ortholog is 100%.
Bootstrap support for Q28Y68 as seed ortholog is 100%.

Group of orthologs #308. Best score 736 bits
Score difference with first non-orthologous sequence - C.intestinalis:736 D.pseudoobscura:736

F6R8V3              	100.00%		Q295G5              	100.00%
Bootstrap support for F6R8V3 as seed ortholog is 100%.
Bootstrap support for Q295G5 as seed ortholog is 100%.

Group of orthologs #309. Best score 734 bits
Score difference with first non-orthologous sequence - C.intestinalis:734 D.pseudoobscura:734

F6PST3              	100.00%		Q2M0V2              	100.00%
Bootstrap support for F6PST3 as seed ortholog is 100%.
Bootstrap support for Q2M0V2 as seed ortholog is 100%.

Group of orthologs #310. Best score 734 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 D.pseudoobscura:500

H2Y2C6              	100.00%		Q299T0              	100.00%
Bootstrap support for H2Y2C6 as seed ortholog is 100%.
Bootstrap support for Q299T0 as seed ortholog is 100%.

Group of orthologs #311. Best score 733 bits
Score difference with first non-orthologous sequence - C.intestinalis:733 D.pseudoobscura:733

F6UET6              	100.00%		Q29DN1              	100.00%
Bootstrap support for F6UET6 as seed ortholog is 100%.
Bootstrap support for Q29DN1 as seed ortholog is 100%.

Group of orthologs #312. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:732 D.pseudoobscura:732

F6VRH3              	100.00%		Q28XK7              	100.00%
Bootstrap support for F6VRH3 as seed ortholog is 100%.
Bootstrap support for Q28XK7 as seed ortholog is 100%.

Group of orthologs #313. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:732 D.pseudoobscura:732

F6SXA9              	100.00%		Q29K74              	100.00%
Bootstrap support for F6SXA9 as seed ortholog is 100%.
Bootstrap support for Q29K74 as seed ortholog is 100%.

Group of orthologs #314. Best score 732 bits
Score difference with first non-orthologous sequence - C.intestinalis:732 D.pseudoobscura:732

Q8HIM9              	100.00%		D2SXY8              	100.00%
Bootstrap support for Q8HIM9 as seed ortholog is 100%.
Bootstrap support for D2SXY8 as seed ortholog is 100%.

Group of orthologs #315. Best score 731 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 D.pseudoobscura:513

F6RHK8              	100.00%		Q29HB2              	100.00%
Bootstrap support for F6RHK8 as seed ortholog is 100%.
Bootstrap support for Q29HB2 as seed ortholog is 100%.

Group of orthologs #316. Best score 731 bits
Score difference with first non-orthologous sequence - C.intestinalis:731 D.pseudoobscura:650

F7BEF3              	100.00%		Q29GX0              	100.00%
Bootstrap support for F7BEF3 as seed ortholog is 100%.
Bootstrap support for Q29GX0 as seed ortholog is 100%.

Group of orthologs #317. Best score 728 bits
Score difference with first non-orthologous sequence - C.intestinalis:728 D.pseudoobscura:365

F6Y8H4              	100.00%		Q2LYL2              	100.00%
Bootstrap support for F6Y8H4 as seed ortholog is 100%.
Bootstrap support for Q2LYL2 as seed ortholog is 100%.

Group of orthologs #318. Best score 727 bits
Score difference with first non-orthologous sequence - C.intestinalis:727 D.pseudoobscura:479

F6WKV2              	100.00%		Q298U9              	100.00%
Bootstrap support for F6WKV2 as seed ortholog is 100%.
Bootstrap support for Q298U9 as seed ortholog is 100%.

Group of orthologs #319. Best score 724 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 D.pseudoobscura:473

F6PJ70              	100.00%		Q2LYV4              	100.00%
Bootstrap support for F6PJ70 as seed ortholog is 100%.
Bootstrap support for Q2LYV4 as seed ortholog is 100%.

Group of orthologs #320. Best score 723 bits
Score difference with first non-orthologous sequence - C.intestinalis:723 D.pseudoobscura:723

F6Z3U3              	100.00%		Q29AE5              	100.00%
Bootstrap support for F6Z3U3 as seed ortholog is 100%.
Bootstrap support for Q29AE5 as seed ortholog is 100%.

Group of orthologs #321. Best score 721 bits
Score difference with first non-orthologous sequence - C.intestinalis:721 D.pseudoobscura:721

F6U8H5              	100.00%		Q29N55              	100.00%
Bootstrap support for F6U8H5 as seed ortholog is 100%.
Bootstrap support for Q29N55 as seed ortholog is 100%.

Group of orthologs #322. Best score 721 bits
Score difference with first non-orthologous sequence - C.intestinalis:721 D.pseudoobscura:721

F7ADU2              	100.00%		Q29D60              	100.00%
Bootstrap support for F7ADU2 as seed ortholog is 100%.
Bootstrap support for Q29D60 as seed ortholog is 100%.

Group of orthologs #323. Best score 720 bits
Score difference with first non-orthologous sequence - C.intestinalis:720 D.pseudoobscura:720

F6WD89              	100.00%		Q296Z2              	100.00%
Q4H3F0              	14.19%		
Bootstrap support for F6WD89 as seed ortholog is 100%.
Bootstrap support for Q296Z2 as seed ortholog is 100%.

Group of orthologs #324. Best score 719 bits
Score difference with first non-orthologous sequence - C.intestinalis:719 D.pseudoobscura:719

F6WAZ5              	100.00%		Q28X89              	100.00%
Bootstrap support for F6WAZ5 as seed ortholog is 100%.
Bootstrap support for Q28X89 as seed ortholog is 100%.

Group of orthologs #325. Best score 718 bits
Score difference with first non-orthologous sequence - C.intestinalis:718 D.pseudoobscura:651

F6XMA0              	100.00%		Q29L81              	100.00%
Bootstrap support for F6XMA0 as seed ortholog is 100%.
Bootstrap support for Q29L81 as seed ortholog is 100%.

Group of orthologs #326. Best score 718 bits
Score difference with first non-orthologous sequence - C.intestinalis:718 D.pseudoobscura:718

F7B5P4              	100.00%		Q29IV7              	100.00%
Bootstrap support for F7B5P4 as seed ortholog is 100%.
Bootstrap support for Q29IV7 as seed ortholog is 100%.

Group of orthologs #327. Best score 715 bits
Score difference with first non-orthologous sequence - C.intestinalis:715 D.pseudoobscura:515

F6V8A8              	100.00%		B5DY27              	100.00%
Bootstrap support for F6V8A8 as seed ortholog is 100%.
Bootstrap support for B5DY27 as seed ortholog is 100%.

Group of orthologs #328. Best score 715 bits
Score difference with first non-orthologous sequence - C.intestinalis:715 D.pseudoobscura:715

F6R8X1              	100.00%		Q29AK9              	100.00%
Bootstrap support for F6R8X1 as seed ortholog is 100%.
Bootstrap support for Q29AK9 as seed ortholog is 100%.

Group of orthologs #329. Best score 714 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 D.pseudoobscura:714

F6REB0              	100.00%		Q29DG1              	100.00%
Bootstrap support for F6REB0 as seed ortholog is 100%.
Bootstrap support for Q29DG1 as seed ortholog is 100%.

Group of orthologs #330. Best score 714 bits
Score difference with first non-orthologous sequence - C.intestinalis:624 D.pseudoobscura:714

F6SBG8              	100.00%		Q29E26              	100.00%
Bootstrap support for F6SBG8 as seed ortholog is 100%.
Bootstrap support for Q29E26 as seed ortholog is 100%.

Group of orthologs #331. Best score 714 bits
Score difference with first non-orthologous sequence - C.intestinalis:667 D.pseudoobscura:614

F6W8G0              	100.00%		Q297T9              	100.00%
Bootstrap support for F6W8G0 as seed ortholog is 100%.
Bootstrap support for Q297T9 as seed ortholog is 100%.

Group of orthologs #332. Best score 713 bits
Score difference with first non-orthologous sequence - C.intestinalis:561 D.pseudoobscura:555

H2XS20              	100.00%		B5DW65              	100.00%
Bootstrap support for H2XS20 as seed ortholog is 100%.
Bootstrap support for B5DW65 as seed ortholog is 100%.

Group of orthologs #333. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:712 D.pseudoobscura:712

F6R2U8              	100.00%		B5DIC7              	100.00%
Bootstrap support for F6R2U8 as seed ortholog is 100%.
Bootstrap support for B5DIC7 as seed ortholog is 100%.

Group of orthologs #334. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:712 D.pseudoobscura:712

F6RHA1              	100.00%		Q29DI0              	100.00%
Bootstrap support for F6RHA1 as seed ortholog is 100%.
Bootstrap support for Q29DI0 as seed ortholog is 100%.

Group of orthologs #335. Best score 712 bits
Score difference with first non-orthologous sequence - C.intestinalis:712 D.pseudoobscura:712

F7AD97              	100.00%		Q29NU9              	100.00%
Bootstrap support for F7AD97 as seed ortholog is 100%.
Bootstrap support for Q29NU9 as seed ortholog is 100%.

Group of orthologs #336. Best score 711 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 D.pseudoobscura:711

F6ZJN8              	100.00%		I5AMR3              	100.00%
Bootstrap support for F6ZJN8 as seed ortholog is 99%.
Bootstrap support for I5AMR3 as seed ortholog is 100%.

Group of orthologs #337. Best score 711 bits
Score difference with first non-orthologous sequence - C.intestinalis:711 D.pseudoobscura:711

F6TBG7              	100.00%		Q29EP6              	100.00%
Bootstrap support for F6TBG7 as seed ortholog is 100%.
Bootstrap support for Q29EP6 as seed ortholog is 100%.

Group of orthologs #338. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 D.pseudoobscura:131

H2XSE7              	100.00%		B5DH76              	100.00%
                    	       		Q29PH4              	61.52%
Bootstrap support for H2XSE7 as seed ortholog is 99%.
Bootstrap support for B5DH76 as seed ortholog is 99%.

Group of orthologs #339. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:710 D.pseudoobscura:424

F7AAM4              	100.00%		Q28XF9              	100.00%
F6WJH6              	10.88%		
Bootstrap support for F7AAM4 as seed ortholog is 100%.
Bootstrap support for Q28XF9 as seed ortholog is 100%.

Group of orthologs #340. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 D.pseudoobscura:423

H2XQX6              	100.00%		Q29K32              	100.00%
                    	       		Q29KG7              	100.00%
Bootstrap support for H2XQX6 as seed ortholog is 100%.
Bootstrap support for Q29K32 as seed ortholog is 100%.
Bootstrap support for Q29KG7 as seed ortholog is 100%.

Group of orthologs #341. Best score 710 bits
Score difference with first non-orthologous sequence - C.intestinalis:472 D.pseudoobscura:622

F6Z194              	100.00%		Q29NU1              	100.00%
Bootstrap support for F6Z194 as seed ortholog is 100%.
Bootstrap support for Q29NU1 as seed ortholog is 100%.

Group of orthologs #342. Best score 709 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 D.pseudoobscura:709

F6YDI9              	100.00%		Q29EB4              	100.00%
Bootstrap support for F6YDI9 as seed ortholog is 100%.
Bootstrap support for Q29EB4 as seed ortholog is 100%.

Group of orthologs #343. Best score 707 bits
Score difference with first non-orthologous sequence - C.intestinalis:611 D.pseudoobscura:588

F6TGH1              	100.00%		Q29DF9              	100.00%
Bootstrap support for F6TGH1 as seed ortholog is 100%.
Bootstrap support for Q29DF9 as seed ortholog is 100%.

Group of orthologs #344. Best score 706 bits
Score difference with first non-orthologous sequence - C.intestinalis:706 D.pseudoobscura:706

F6RBT7              	100.00%		Q29LJ0              	100.00%
Bootstrap support for F6RBT7 as seed ortholog is 100%.
Bootstrap support for Q29LJ0 as seed ortholog is 100%.

Group of orthologs #345. Best score 706 bits
Score difference with first non-orthologous sequence - C.intestinalis:706 D.pseudoobscura:706

F6UWK1              	100.00%		Q29MI4              	100.00%
Bootstrap support for F6UWK1 as seed ortholog is 100%.
Bootstrap support for Q29MI4 as seed ortholog is 100%.

Group of orthologs #346. Best score 705 bits
Score difference with first non-orthologous sequence - C.intestinalis:705 D.pseudoobscura:174

F6RMI2              	100.00%		Q29BM2              	100.00%
Bootstrap support for F6RMI2 as seed ortholog is 100%.
Bootstrap support for Q29BM2 as seed ortholog is 99%.

Group of orthologs #347. Best score 705 bits
Score difference with first non-orthologous sequence - C.intestinalis:705 D.pseudoobscura:705

F7A9M5              	100.00%		Q29ET1              	100.00%
Bootstrap support for F7A9M5 as seed ortholog is 100%.
Bootstrap support for Q29ET1 as seed ortholog is 100%.

Group of orthologs #348. Best score 703 bits
Score difference with first non-orthologous sequence - C.intestinalis:703 D.pseudoobscura:580

F6X2D1              	100.00%		B5DS03              	100.00%
Bootstrap support for F6X2D1 as seed ortholog is 100%.
Bootstrap support for B5DS03 as seed ortholog is 100%.

Group of orthologs #349. Best score 702 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 D.pseudoobscura:393

F6QJ41              	100.00%		Q29KH3              	100.00%
Bootstrap support for F6QJ41 as seed ortholog is 100%.
Bootstrap support for Q29KH3 as seed ortholog is 100%.

Group of orthologs #350. Best score 701 bits
Score difference with first non-orthologous sequence - C.intestinalis:701 D.pseudoobscura:701

H2XNV6              	100.00%		Q290A0              	100.00%
Bootstrap support for H2XNV6 as seed ortholog is 100%.
Bootstrap support for Q290A0 as seed ortholog is 100%.

Group of orthologs #351. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:700 D.pseudoobscura:453

F6X3R5              	100.00%		Q29JU3              	100.00%
                    	       		B5DK91              	79.67%
                    	       		B5DK92              	58.51%
                    	       		B5DK93              	56.41%
Bootstrap support for F6X3R5 as seed ortholog is 100%.
Bootstrap support for Q29JU3 as seed ortholog is 100%.

Group of orthologs #352. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:700 D.pseudoobscura:509

F6SBC7              	100.00%		Q28ZW7              	100.00%
Bootstrap support for F6SBC7 as seed ortholog is 100%.
Bootstrap support for Q28ZW7 as seed ortholog is 100%.

Group of orthologs #353. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:700 D.pseudoobscura:700

F6XTJ3              	100.00%		Q28ZG8              	100.00%
Bootstrap support for F6XTJ3 as seed ortholog is 100%.
Bootstrap support for Q28ZG8 as seed ortholog is 100%.

Group of orthologs #354. Best score 700 bits
Score difference with first non-orthologous sequence - C.intestinalis:549 D.pseudoobscura:64

F6UWX3              	100.00%		Q29HL5              	100.00%
Bootstrap support for F6UWX3 as seed ortholog is 100%.
Bootstrap support for Q29HL5 as seed ortholog is 99%.

Group of orthologs #355. Best score 699 bits
Score difference with first non-orthologous sequence - C.intestinalis:699 D.pseudoobscura:699

F6Q0W6              	100.00%		Q291D8              	100.00%
Bootstrap support for F6Q0W6 as seed ortholog is 100%.
Bootstrap support for Q291D8 as seed ortholog is 100%.

Group of orthologs #356. Best score 698 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 D.pseudoobscura:389

F7BHP4              	100.00%		Q29I61              	100.00%
                    	       		B5DXM1              	7.45%
Bootstrap support for F7BHP4 as seed ortholog is 100%.
Bootstrap support for Q29I61 as seed ortholog is 100%.

Group of orthologs #357. Best score 696 bits
Score difference with first non-orthologous sequence - C.intestinalis:696 D.pseudoobscura:696

F6TGK6              	100.00%		B5DYG6              	100.00%
Bootstrap support for F6TGK6 as seed ortholog is 100%.
Bootstrap support for B5DYG6 as seed ortholog is 100%.

Group of orthologs #358. Best score 696 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 D.pseudoobscura:696

F6WXR3              	100.00%		Q28XI5              	100.00%
Bootstrap support for F6WXR3 as seed ortholog is 100%.
Bootstrap support for Q28XI5 as seed ortholog is 100%.

Group of orthologs #359. Best score 696 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 D.pseudoobscura:392

F6XPL3              	100.00%		Q2LZL5              	100.00%
Bootstrap support for F6XPL3 as seed ortholog is 100%.
Bootstrap support for Q2LZL5 as seed ortholog is 100%.

Group of orthologs #360. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:695 D.pseudoobscura:695

F6Z761              	100.00%		B5DKG3              	100.00%
                    	       		Q29JI7              	13.07%
Bootstrap support for F6Z761 as seed ortholog is 100%.
Bootstrap support for B5DKG3 as seed ortholog is 100%.

Group of orthologs #361. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:695 D.pseudoobscura:695

F6WYI9              	100.00%		Q29JS0              	100.00%
Bootstrap support for F6WYI9 as seed ortholog is 100%.
Bootstrap support for Q29JS0 as seed ortholog is 100%.

Group of orthologs #362. Best score 695 bits
Score difference with first non-orthologous sequence - C.intestinalis:695 D.pseudoobscura:695

H2XM66              	100.00%		Q29CY6              	100.00%
Bootstrap support for H2XM66 as seed ortholog is 100%.
Bootstrap support for Q29CY6 as seed ortholog is 100%.

Group of orthologs #363. Best score 693 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 D.pseudoobscura:254

F6S7U7              	100.00%		Q298M7              	100.00%
Bootstrap support for F6S7U7 as seed ortholog is 100%.
Bootstrap support for Q298M7 as seed ortholog is 100%.

Group of orthologs #364. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 D.pseudoobscura:691

F6SNC6              	100.00%		B5DP84              	100.00%
                    	       		B5DWE5              	11.11%
Bootstrap support for F6SNC6 as seed ortholog is 100%.
Bootstrap support for B5DP84 as seed ortholog is 100%.

Group of orthologs #365. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:691 D.pseudoobscura:691

F6YXI8              	100.00%		Q28XF0              	100.00%
Bootstrap support for F6YXI8 as seed ortholog is 100%.
Bootstrap support for Q28XF0 as seed ortholog is 100%.

Group of orthologs #366. Best score 691 bits
Score difference with first non-orthologous sequence - C.intestinalis:551 D.pseudoobscura:60

F6T9M1              	100.00%		Q29IU3              	100.00%
Bootstrap support for F6T9M1 as seed ortholog is 100%.
Bootstrap support for Q29IU3 as seed ortholog is 99%.

Group of orthologs #367. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:690 D.pseudoobscura:690

F6RNR5              	100.00%		B5DKS8              	100.00%
Bootstrap support for F6RNR5 as seed ortholog is 100%.
Bootstrap support for B5DKS8 as seed ortholog is 100%.

Group of orthologs #368. Best score 690 bits
Score difference with first non-orthologous sequence - C.intestinalis:690 D.pseudoobscura:578

H2XS37              	100.00%		Q29AN9              	100.00%
Bootstrap support for H2XS37 as seed ortholog is 100%.
Bootstrap support for Q29AN9 as seed ortholog is 100%.

Group of orthologs #369. Best score 689 bits
Score difference with first non-orthologous sequence - C.intestinalis:689 D.pseudoobscura:689

F6XK22              	100.00%		B5DP06              	100.00%
Bootstrap support for F6XK22 as seed ortholog is 100%.
Bootstrap support for B5DP06 as seed ortholog is 100%.

Group of orthologs #370. Best score 689 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 D.pseudoobscura:689

F6SF88              	100.00%		Q29J49              	100.00%
Bootstrap support for F6SF88 as seed ortholog is 100%.
Bootstrap support for Q29J49 as seed ortholog is 100%.

Group of orthologs #371. Best score 689 bits
Score difference with first non-orthologous sequence - C.intestinalis:689 D.pseudoobscura:689

H2XKW2              	100.00%		Q290F7              	100.00%
Bootstrap support for H2XKW2 as seed ortholog is 100%.
Bootstrap support for Q290F7 as seed ortholog is 100%.

Group of orthologs #372. Best score 688 bits
Score difference with first non-orthologous sequence - C.intestinalis:688 D.pseudoobscura:688

F6VEU9              	100.00%		Q295J6              	100.00%
Bootstrap support for F6VEU9 as seed ortholog is 100%.
Bootstrap support for Q295J6 as seed ortholog is 100%.

Group of orthologs #373. Best score 688 bits
Score difference with first non-orthologous sequence - C.intestinalis:688 D.pseudoobscura:688

F7AYB9              	100.00%		Q28XU5              	100.00%
Bootstrap support for F7AYB9 as seed ortholog is 100%.
Bootstrap support for Q28XU5 as seed ortholog is 100%.

Group of orthologs #374. Best score 686 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:686

O76808              	100.00%		B5DHG8              	100.00%
Bootstrap support for O76808 as seed ortholog is 99%.
Bootstrap support for B5DHG8 as seed ortholog is 100%.

Group of orthologs #375. Best score 685 bits
Score difference with first non-orthologous sequence - C.intestinalis:685 D.pseudoobscura:532

F6WV80              	100.00%		Q28WU9              	100.00%
Bootstrap support for F6WV80 as seed ortholog is 100%.
Bootstrap support for Q28WU9 as seed ortholog is 100%.

Group of orthologs #376. Best score 685 bits
Score difference with first non-orthologous sequence - C.intestinalis:685 D.pseudoobscura:244

F6TKV3              	100.00%		Q29CE4              	100.00%
Bootstrap support for F6TKV3 as seed ortholog is 100%.
Bootstrap support for Q29CE4 as seed ortholog is 100%.

Group of orthologs #377. Best score 684 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 D.pseudoobscura:472

F6XF93              	100.00%		Q298G7              	100.00%
Bootstrap support for F6XF93 as seed ortholog is 100%.
Bootstrap support for Q298G7 as seed ortholog is 100%.

Group of orthologs #378. Best score 683 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 D.pseudoobscura:191

F6R6G1              	100.00%		Q29MW2              	100.00%
Bootstrap support for F6R6G1 as seed ortholog is 100%.
Bootstrap support for Q29MW2 as seed ortholog is 99%.

Group of orthologs #379. Best score 683 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 D.pseudoobscura:119

F6UR44              	100.00%		Q29NN6              	100.00%
Bootstrap support for F6UR44 as seed ortholog is 100%.
Bootstrap support for Q29NN6 as seed ortholog is 98%.

Group of orthologs #380. Best score 682 bits
Score difference with first non-orthologous sequence - C.intestinalis:682 D.pseudoobscura:682

F6UW46              	100.00%		Q29AJ7              	100.00%
Bootstrap support for F6UW46 as seed ortholog is 100%.
Bootstrap support for Q29AJ7 as seed ortholog is 100%.

Group of orthologs #381. Best score 681 bits
Score difference with first non-orthologous sequence - C.intestinalis:681 D.pseudoobscura:681

F6U2U3              	100.00%		Q29NT3              	100.00%
Bootstrap support for F6U2U3 as seed ortholog is 100%.
Bootstrap support for Q29NT3 as seed ortholog is 100%.

Group of orthologs #382. Best score 681 bits
Score difference with first non-orthologous sequence - C.intestinalis:681 D.pseudoobscura:681

F6YWF1              	100.00%		Q29F75              	100.00%
Bootstrap support for F6YWF1 as seed ortholog is 100%.
Bootstrap support for Q29F75 as seed ortholog is 100%.

Group of orthologs #383. Best score 679 bits
Score difference with first non-orthologous sequence - C.intestinalis:679 D.pseudoobscura:679

F6SPZ6              	100.00%		Q28YH3              	100.00%
Bootstrap support for F6SPZ6 as seed ortholog is 100%.
Bootstrap support for Q28YH3 as seed ortholog is 100%.

Group of orthologs #384. Best score 679 bits
Score difference with first non-orthologous sequence - C.intestinalis:679 D.pseudoobscura:679

F6Y1N2              	100.00%		Q29LZ8              	100.00%
Bootstrap support for F6Y1N2 as seed ortholog is 100%.
Bootstrap support for Q29LZ8 as seed ortholog is 100%.

Group of orthologs #385. Best score 678 bits
Score difference with first non-orthologous sequence - C.intestinalis:609 D.pseudoobscura:613

F6SPK3              	100.00%		Q290E9              	100.00%
Bootstrap support for F6SPK3 as seed ortholog is 100%.
Bootstrap support for Q290E9 as seed ortholog is 100%.

Group of orthologs #386. Best score 678 bits
Score difference with first non-orthologous sequence - C.intestinalis:678 D.pseudoobscura:678

H2Y1I5              	100.00%		Q29DX8              	100.00%
Bootstrap support for H2Y1I5 as seed ortholog is 100%.
Bootstrap support for Q29DX8 as seed ortholog is 100%.

Group of orthologs #387. Best score 677 bits
Score difference with first non-orthologous sequence - C.intestinalis:677 D.pseudoobscura:677

F6XCK4              	100.00%		Q29G51              	100.00%
Bootstrap support for F6XCK4 as seed ortholog is 100%.
Bootstrap support for Q29G51 as seed ortholog is 100%.

Group of orthologs #388. Best score 676 bits
Score difference with first non-orthologous sequence - C.intestinalis:547 D.pseudoobscura:454

H2XQT6              	100.00%		B5DRP7              	100.00%
Bootstrap support for H2XQT6 as seed ortholog is 100%.
Bootstrap support for B5DRP7 as seed ortholog is 100%.

Group of orthologs #389. Best score 675 bits
Score difference with first non-orthologous sequence - C.intestinalis:531 D.pseudoobscura:675

F7AT12              	100.00%		B5DY71              	100.00%
Bootstrap support for F7AT12 as seed ortholog is 100%.
Bootstrap support for B5DY71 as seed ortholog is 100%.

Group of orthologs #390. Best score 675 bits
Score difference with first non-orthologous sequence - C.intestinalis:675 D.pseudoobscura:675

F6WWD5              	100.00%		Q295U4              	100.00%
Bootstrap support for F6WWD5 as seed ortholog is 100%.
Bootstrap support for Q295U4 as seed ortholog is 100%.

Group of orthologs #391. Best score 673 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 D.pseudoobscura:544

F6R107              	100.00%		Q2M0W7              	100.00%
Bootstrap support for F6R107 as seed ortholog is 100%.
Bootstrap support for Q2M0W7 as seed ortholog is 100%.

Group of orthologs #392. Best score 672 bits
Score difference with first non-orthologous sequence - C.intestinalis:672 D.pseudoobscura:672

F7A429              	100.00%		B5DWE4              	100.00%
Bootstrap support for F7A429 as seed ortholog is 100%.
Bootstrap support for B5DWE4 as seed ortholog is 100%.

Group of orthologs #393. Best score 671 bits
Score difference with first non-orthologous sequence - C.intestinalis:671 D.pseudoobscura:568

F6XT42              	100.00%		Q29G75              	100.00%
Bootstrap support for F6XT42 as seed ortholog is 100%.
Bootstrap support for Q29G75 as seed ortholog is 100%.

Group of orthologs #394. Best score 671 bits
Score difference with first non-orthologous sequence - C.intestinalis:671 D.pseudoobscura:671

F6YNT4              	100.00%		Q29IL7              	100.00%
Bootstrap support for F6YNT4 as seed ortholog is 100%.
Bootstrap support for Q29IL7 as seed ortholog is 100%.

Group of orthologs #395. Best score 671 bits
Score difference with first non-orthologous sequence - C.intestinalis:671 D.pseudoobscura:671

H2XVP1              	100.00%		Q28X33              	100.00%
Bootstrap support for H2XVP1 as seed ortholog is 100%.
Bootstrap support for Q28X33 as seed ortholog is 100%.

Group of orthologs #396. Best score 670 bits
Score difference with first non-orthologous sequence - C.intestinalis:670 D.pseudoobscura:670

F6YIU2              	100.00%		Q28Y45              	100.00%
Bootstrap support for F6YIU2 as seed ortholog is 100%.
Bootstrap support for Q28Y45 as seed ortholog is 100%.

Group of orthologs #397. Best score 670 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 D.pseudoobscura:670

F6WR85              	100.00%		Q2LZ16              	100.00%
Bootstrap support for F6WR85 as seed ortholog is 100%.
Bootstrap support for Q2LZ16 as seed ortholog is 100%.

Group of orthologs #398. Best score 668 bits
Score difference with first non-orthologous sequence - C.intestinalis:668 D.pseudoobscura:509

H2XUE4              	100.00%		Q29M02              	100.00%
Bootstrap support for H2XUE4 as seed ortholog is 100%.
Bootstrap support for Q29M02 as seed ortholog is 100%.

Group of orthologs #399. Best score 667 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 D.pseudoobscura:97

F6YV05              	100.00%		Q296Q0              	100.00%
F6SW71              	32.64%		
Bootstrap support for F6YV05 as seed ortholog is 67%.
Alternative seed ortholog is F6WZZ7 (37 bits away from this cluster)
Bootstrap support for Q296Q0 as seed ortholog is 93%.

Group of orthologs #400. Best score 667 bits
Score difference with first non-orthologous sequence - C.intestinalis:667 D.pseudoobscura:667

F6Z7W1              	100.00%		I5AP05              	100.00%
Bootstrap support for F6Z7W1 as seed ortholog is 100%.
Bootstrap support for I5AP05 as seed ortholog is 100%.

Group of orthologs #401. Best score 667 bits
Score difference with first non-orthologous sequence - C.intestinalis:667 D.pseudoobscura:667

H2XPG6              	100.00%		B5DRA3              	100.00%
Bootstrap support for H2XPG6 as seed ortholog is 100%.
Bootstrap support for B5DRA3 as seed ortholog is 100%.

Group of orthologs #402. Best score 666 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 D.pseudoobscura:64

F6XTN6              	100.00%		B5DZ75              	100.00%
Bootstrap support for F6XTN6 as seed ortholog is 99%.
Bootstrap support for B5DZ75 as seed ortholog is 87%.

Group of orthologs #403. Best score 666 bits
Score difference with first non-orthologous sequence - C.intestinalis:666 D.pseudoobscura:357

F6XKP0              	100.00%		Q299D0              	100.00%
Bootstrap support for F6XKP0 as seed ortholog is 100%.
Bootstrap support for Q299D0 as seed ortholog is 100%.

Group of orthologs #404. Best score 666 bits
Score difference with first non-orthologous sequence - C.intestinalis:666 D.pseudoobscura:666

F6VYC6              	100.00%		Q29EI3              	100.00%
Bootstrap support for F6VYC6 as seed ortholog is 100%.
Bootstrap support for Q29EI3 as seed ortholog is 100%.

Group of orthologs #405. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 D.pseudoobscura:663

F6X3Q7              	100.00%		B5DJJ9              	100.00%
Bootstrap support for F6X3Q7 as seed ortholog is 100%.
Bootstrap support for B5DJJ9 as seed ortholog is 100%.

Group of orthologs #406. Best score 663 bits
Score difference with first non-orthologous sequence - C.intestinalis:663 D.pseudoobscura:663

F7B580              	100.00%		Q298I1              	100.00%
Bootstrap support for F7B580 as seed ortholog is 100%.
Bootstrap support for Q298I1 as seed ortholog is 100%.

Group of orthologs #407. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 D.pseudoobscura:337

F6WI66              	100.00%		B5DWF0              	100.00%
Bootstrap support for F6WI66 as seed ortholog is 100%.
Bootstrap support for B5DWF0 as seed ortholog is 100%.

Group of orthologs #408. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 D.pseudoobscura:208

F7BJA7              	100.00%		Q295I8              	100.00%
Bootstrap support for F7BJA7 as seed ortholog is 100%.
Bootstrap support for Q295I8 as seed ortholog is 100%.

Group of orthologs #409. Best score 659 bits
Score difference with first non-orthologous sequence - C.intestinalis:659 D.pseudoobscura:659

F7AEC5              	100.00%		Q29I35              	100.00%
Bootstrap support for F7AEC5 as seed ortholog is 100%.
Bootstrap support for Q29I35 as seed ortholog is 100%.

Group of orthologs #410. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 D.pseudoobscura:113

F6U1K7              	100.00%		B5DLC8              	100.00%
Bootstrap support for F6U1K7 as seed ortholog is 100%.
Bootstrap support for B5DLC8 as seed ortholog is 99%.

Group of orthologs #411. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 D.pseudoobscura:656

F6RIY5              	100.00%		Q29ER5              	100.00%
Bootstrap support for F6RIY5 as seed ortholog is 100%.
Bootstrap support for Q29ER5 as seed ortholog is 100%.

Group of orthologs #412. Best score 656 bits
Score difference with first non-orthologous sequence - C.intestinalis:656 D.pseudoobscura:656

F6ZN98              	100.00%		Q290F6              	100.00%
Bootstrap support for F6ZN98 as seed ortholog is 100%.
Bootstrap support for Q290F6 as seed ortholog is 100%.

Group of orthologs #413. Best score 655 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 D.pseudoobscura:122

F6XJD6              	100.00%		Q29LM5              	100.00%
Bootstrap support for F6XJD6 as seed ortholog is 89%.
Bootstrap support for Q29LM5 as seed ortholog is 99%.

Group of orthologs #414. Best score 654 bits
Score difference with first non-orthologous sequence - C.intestinalis:654 D.pseudoobscura:654

H2XRD5              	100.00%		B5DKM2              	100.00%
Bootstrap support for H2XRD5 as seed ortholog is 100%.
Bootstrap support for B5DKM2 as seed ortholog is 100%.

Group of orthologs #415. Best score 653 bits
Score difference with first non-orthologous sequence - C.intestinalis:653 D.pseudoobscura:561

F6Q0U4              	100.00%		B5DLU0              	100.00%
                    	       		B5DWX8              	79.31%
Bootstrap support for F6Q0U4 as seed ortholog is 100%.
Bootstrap support for B5DLU0 as seed ortholog is 100%.

Group of orthologs #416. Best score 653 bits
Score difference with first non-orthologous sequence - C.intestinalis:653 D.pseudoobscura:653

F6XRI7              	100.00%		Q29GX2              	100.00%
Bootstrap support for F6XRI7 as seed ortholog is 100%.
Bootstrap support for Q29GX2 as seed ortholog is 100%.

Group of orthologs #417. Best score 653 bits
Score difference with first non-orthologous sequence - C.intestinalis:653 D.pseudoobscura:653

H2XXU0              	100.00%		Q2M0K5              	100.00%
Bootstrap support for H2XXU0 as seed ortholog is 100%.
Bootstrap support for Q2M0K5 as seed ortholog is 100%.

Group of orthologs #418. Best score 650 bits
Score difference with first non-orthologous sequence - C.intestinalis:650 D.pseudoobscura:650

F6ZDC7              	100.00%		Q29EN2              	100.00%
Bootstrap support for F6ZDC7 as seed ortholog is 100%.
Bootstrap support for Q29EN2 as seed ortholog is 100%.

Group of orthologs #419. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 D.pseudoobscura:318

F6PPJ1              	100.00%		Q28YC5              	100.00%
Bootstrap support for F6PPJ1 as seed ortholog is 100%.
Bootstrap support for Q28YC5 as seed ortholog is 100%.

Group of orthologs #420. Best score 649 bits
Score difference with first non-orthologous sequence - C.intestinalis:452 D.pseudoobscura:649

F6UCG0              	100.00%		Q29KC0              	100.00%
Bootstrap support for F6UCG0 as seed ortholog is 100%.
Bootstrap support for Q29KC0 as seed ortholog is 100%.

Group of orthologs #421. Best score 647 bits
Score difference with first non-orthologous sequence - C.intestinalis:647 D.pseudoobscura:366

F7ABT2              	100.00%		Q29CL9              	100.00%
Bootstrap support for F7ABT2 as seed ortholog is 100%.
Bootstrap support for Q29CL9 as seed ortholog is 100%.

Group of orthologs #422. Best score 647 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 D.pseudoobscura:647

H2XWW7              	100.00%		Q299V4              	100.00%
Bootstrap support for H2XWW7 as seed ortholog is 100%.
Bootstrap support for Q299V4 as seed ortholog is 100%.

Group of orthologs #423. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 D.pseudoobscura:197

F6UI47              	100.00%		B5DYU6              	100.00%
Bootstrap support for F6UI47 as seed ortholog is 100%.
Bootstrap support for B5DYU6 as seed ortholog is 100%.

Group of orthologs #424. Best score 646 bits
Score difference with first non-orthologous sequence - C.intestinalis:646 D.pseudoobscura:646

F7A2X8              	100.00%		P16340              	100.00%
Bootstrap support for F7A2X8 as seed ortholog is 100%.
Bootstrap support for P16340 as seed ortholog is 100%.

Group of orthologs #425. Best score 645 bits
Score difference with first non-orthologous sequence - C.intestinalis:509 D.pseudoobscura:292

F7ARH4              	100.00%		Q29H17              	100.00%
Bootstrap support for F7ARH4 as seed ortholog is 100%.
Bootstrap support for Q29H17 as seed ortholog is 50%.
Alternative seed ortholog is B5DZ34 (292 bits away from this cluster)

Group of orthologs #426. Best score 645 bits
Score difference with first non-orthologous sequence - C.intestinalis:645 D.pseudoobscura:289

F7AX62              	100.00%		Q29HY8              	100.00%
Bootstrap support for F7AX62 as seed ortholog is 100%.
Bootstrap support for Q29HY8 as seed ortholog is 100%.

Group of orthologs #427. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:643 D.pseudoobscura:643

F6TJ71              	100.00%		Q291H5              	100.00%
Bootstrap support for F6TJ71 as seed ortholog is 100%.
Bootstrap support for Q291H5 as seed ortholog is 100%.

Group of orthologs #428. Best score 643 bits
Score difference with first non-orthologous sequence - C.intestinalis:643 D.pseudoobscura:643

F7BMY3              	100.00%		Q2M146              	100.00%
Bootstrap support for F7BMY3 as seed ortholog is 100%.
Bootstrap support for Q2M146 as seed ortholog is 100%.

Group of orthologs #429. Best score 642 bits
Score difference with first non-orthologous sequence - C.intestinalis:642 D.pseudoobscura:642

F6U2M6              	100.00%		B5DZ83              	100.00%
Bootstrap support for F6U2M6 as seed ortholog is 100%.
Bootstrap support for B5DZ83 as seed ortholog is 100%.

Group of orthologs #430. Best score 642 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 D.pseudoobscura:238

F6XVE4              	100.00%		Q29M65              	100.00%
Bootstrap support for F6XVE4 as seed ortholog is 100%.
Bootstrap support for Q29M65 as seed ortholog is 100%.

Group of orthologs #431. Best score 640 bits
Score difference with first non-orthologous sequence - C.intestinalis:640 D.pseudoobscura:640

F6W790              	100.00%		Q297C7              	100.00%
Bootstrap support for F6W790 as seed ortholog is 100%.
Bootstrap support for Q297C7 as seed ortholog is 100%.

Group of orthologs #432. Best score 640 bits
Score difference with first non-orthologous sequence - C.intestinalis:511 D.pseudoobscura:188

F6YDF4              	100.00%		Q2M042              	100.00%
Bootstrap support for F6YDF4 as seed ortholog is 100%.
Bootstrap support for Q2M042 as seed ortholog is 99%.

Group of orthologs #433. Best score 639 bits
Score difference with first non-orthologous sequence - C.intestinalis:639 D.pseudoobscura:639

F6SM85              	100.00%		Q29KW7              	100.00%
Bootstrap support for F6SM85 as seed ortholog is 100%.
Bootstrap support for Q29KW7 as seed ortholog is 100%.

Group of orthologs #434. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:637 D.pseudoobscura:637

F6RKU1              	100.00%		B5E051              	100.00%
Bootstrap support for F6RKU1 as seed ortholog is 100%.
Bootstrap support for B5E051 as seed ortholog is 100%.

Group of orthologs #435. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 D.pseudoobscura:401

F6PL57              	100.00%		Q294G8              	100.00%
Bootstrap support for F6PL57 as seed ortholog is 100%.
Bootstrap support for Q294G8 as seed ortholog is 100%.

Group of orthologs #436. Best score 637 bits
Score difference with first non-orthologous sequence - C.intestinalis:637 D.pseudoobscura:637

F6PRK2              	100.00%		Q29P77              	100.00%
Bootstrap support for F6PRK2 as seed ortholog is 100%.
Bootstrap support for Q29P77 as seed ortholog is 100%.

Group of orthologs #437. Best score 636 bits
Score difference with first non-orthologous sequence - C.intestinalis:636 D.pseudoobscura:636

F7AHE5              	100.00%		B5DYJ0              	100.00%
Bootstrap support for F7AHE5 as seed ortholog is 100%.
Bootstrap support for B5DYJ0 as seed ortholog is 100%.

Group of orthologs #438. Best score 636 bits
Score difference with first non-orthologous sequence - C.intestinalis:636 D.pseudoobscura:636

F6XLA1              	100.00%		Q292T4              	100.00%
Bootstrap support for F6XLA1 as seed ortholog is 100%.
Bootstrap support for Q292T4 as seed ortholog is 100%.

Group of orthologs #439. Best score 635 bits
Score difference with first non-orthologous sequence - C.intestinalis:635 D.pseudoobscura:635

F6ZDB4              	100.00%		Q29GI5              	100.00%
Bootstrap support for F6ZDB4 as seed ortholog is 100%.
Bootstrap support for Q29GI5 as seed ortholog is 100%.

Group of orthologs #440. Best score 634 bits
Score difference with first non-orthologous sequence - C.intestinalis:634 D.pseudoobscura:587

F6ZC49              	100.00%		Q28Y76              	100.00%
Bootstrap support for F6ZC49 as seed ortholog is 100%.
Bootstrap support for Q28Y76 as seed ortholog is 100%.

Group of orthologs #441. Best score 633 bits
Score difference with first non-orthologous sequence - C.intestinalis:633 D.pseudoobscura:562

F6XCG6              	100.00%		Q29A25              	100.00%
Bootstrap support for F6XCG6 as seed ortholog is 100%.
Bootstrap support for Q29A25 as seed ortholog is 100%.

Group of orthologs #442. Best score 632 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 D.pseudoobscura:585

F6RCR9              	100.00%		Q29IZ7              	100.00%
Bootstrap support for F6RCR9 as seed ortholog is 100%.
Bootstrap support for Q29IZ7 as seed ortholog is 100%.

Group of orthologs #443. Best score 631 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 D.pseudoobscura:62

H2Y3G9              	100.00%		Q2M0Y5              	100.00%
Bootstrap support for H2Y3G9 as seed ortholog is 80%.
Bootstrap support for Q2M0Y5 as seed ortholog is 82%.

Group of orthologs #444. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:630 D.pseudoobscura:109

F6SHG8              	100.00%		B5DTD6              	100.00%
Bootstrap support for F6SHG8 as seed ortholog is 100%.
Bootstrap support for B5DTD6 as seed ortholog is 99%.

Group of orthologs #445. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 D.pseudoobscura:630

F6WAY8              	100.00%		I5ANZ0              	100.00%
Bootstrap support for F6WAY8 as seed ortholog is 100%.
Bootstrap support for I5ANZ0 as seed ortholog is 100%.

Group of orthologs #446. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:630 D.pseudoobscura:630

F7AI93              	100.00%		Q297I7              	100.00%
Bootstrap support for F7AI93 as seed ortholog is 100%.
Bootstrap support for Q297I7 as seed ortholog is 100%.

Group of orthologs #447. Best score 630 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 D.pseudoobscura:547

H2XYB0              	100.00%		Q297C4              	100.00%
Bootstrap support for H2XYB0 as seed ortholog is 100%.
Bootstrap support for Q297C4 as seed ortholog is 100%.

Group of orthologs #448. Best score 629 bits
Score difference with first non-orthologous sequence - C.intestinalis:629 D.pseudoobscura:629

F6T2D0              	100.00%		Q29JE2              	100.00%
Bootstrap support for F6T2D0 as seed ortholog is 100%.
Bootstrap support for Q29JE2 as seed ortholog is 100%.

Group of orthologs #449. Best score 629 bits
Score difference with first non-orthologous sequence - C.intestinalis:629 D.pseudoobscura:629

F6X4B8              	100.00%		Q29C41              	100.00%
Bootstrap support for F6X4B8 as seed ortholog is 100%.
Bootstrap support for Q29C41 as seed ortholog is 100%.

Group of orthologs #450. Best score 628 bits
Score difference with first non-orthologous sequence - C.intestinalis:628 D.pseudoobscura:628

F6SC38              	100.00%		Q28YH6              	100.00%
Bootstrap support for F6SC38 as seed ortholog is 100%.
Bootstrap support for Q28YH6 as seed ortholog is 100%.

Group of orthologs #451. Best score 628 bits
Score difference with first non-orthologous sequence - C.intestinalis:628 D.pseudoobscura:628

H2XSZ6              	100.00%		Q29CZ6              	100.00%
Bootstrap support for H2XSZ6 as seed ortholog is 100%.
Bootstrap support for Q29CZ6 as seed ortholog is 100%.

Group of orthologs #452. Best score 626 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 D.pseudoobscura:202

F6SLT5              	100.00%		I5ANK2              	100.00%
                    	       		Q29A14              	23.53%
                    	       		Q29A15              	13.52%
Bootstrap support for F6SLT5 as seed ortholog is 90%.
Bootstrap support for I5ANK2 as seed ortholog is 99%.

Group of orthologs #453. Best score 626 bits
Score difference with first non-orthologous sequence - C.intestinalis:626 D.pseudoobscura:626

F6PL95              	100.00%		Q29NT1              	100.00%
                    	       		Q293Z1              	70.74%
Bootstrap support for F6PL95 as seed ortholog is 100%.
Bootstrap support for Q29NT1 as seed ortholog is 100%.

Group of orthologs #454. Best score 626 bits
Score difference with first non-orthologous sequence - C.intestinalis:626 D.pseudoobscura:138

H2XU13              	100.00%		Q29IJ0              	100.00%
Bootstrap support for H2XU13 as seed ortholog is 100%.
Bootstrap support for Q29IJ0 as seed ortholog is 99%.

Group of orthologs #455. Best score 624 bits
Score difference with first non-orthologous sequence - C.intestinalis:624 D.pseudoobscura:624

F6TSV6              	100.00%		Q28YY2              	100.00%
Bootstrap support for F6TSV6 as seed ortholog is 100%.
Bootstrap support for Q28YY2 as seed ortholog is 100%.

Group of orthologs #456. Best score 624 bits
Score difference with first non-orthologous sequence - C.intestinalis:624 D.pseudoobscura:624

F6T5V0              	100.00%		Q29F37              	100.00%
Bootstrap support for F6T5V0 as seed ortholog is 100%.
Bootstrap support for Q29F37 as seed ortholog is 100%.

Group of orthologs #457. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:623 D.pseudoobscura:623

F6XIP9              	100.00%		B5DY99              	100.00%
                    	       		Q295S1              	20.88%
Bootstrap support for F6XIP9 as seed ortholog is 100%.
Bootstrap support for B5DY99 as seed ortholog is 100%.

Group of orthologs #458. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:623 D.pseudoobscura:313

F6T060              	100.00%		Q2M0E3              	100.00%
F6SZU4              	54.07%		
Bootstrap support for F6T060 as seed ortholog is 100%.
Bootstrap support for Q2M0E3 as seed ortholog is 100%.

Group of orthologs #459. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:623 D.pseudoobscura:485

F6PPA8              	100.00%		I5APN9              	100.00%
Bootstrap support for F6PPA8 as seed ortholog is 100%.
Bootstrap support for I5APN9 as seed ortholog is 100%.

Group of orthologs #460. Best score 623 bits
Score difference with first non-orthologous sequence - C.intestinalis:623 D.pseudoobscura:623

F6YXZ3              	100.00%		Q2LYV1              	100.00%
Bootstrap support for F6YXZ3 as seed ortholog is 100%.
Bootstrap support for Q2LYV1 as seed ortholog is 100%.

Group of orthologs #461. Best score 622 bits
Score difference with first non-orthologous sequence - C.intestinalis:622 D.pseudoobscura:622

F6Q601              	100.00%		Q29IU4              	100.00%
Bootstrap support for F6Q601 as seed ortholog is 100%.
Bootstrap support for Q29IU4 as seed ortholog is 100%.

Group of orthologs #462. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:621 D.pseudoobscura:621

Q4H2R2              	100.00%		Q293F6              	100.00%
F6VQ10              	75.59%		
Bootstrap support for Q4H2R2 as seed ortholog is 100%.
Bootstrap support for Q293F6 as seed ortholog is 100%.

Group of orthologs #463. Best score 621 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 D.pseudoobscura:400

F6Q0M2              	100.00%		Q2LZZ7              	100.00%
Bootstrap support for F6Q0M2 as seed ortholog is 100%.
Bootstrap support for Q2LZZ7 as seed ortholog is 100%.

Group of orthologs #464. Best score 620 bits
Score difference with first non-orthologous sequence - C.intestinalis:620 D.pseudoobscura:620

F6U8C7              	100.00%		B5E081              	100.00%
Bootstrap support for F6U8C7 as seed ortholog is 100%.
Bootstrap support for B5E081 as seed ortholog is 100%.

Group of orthologs #465. Best score 620 bits
Score difference with first non-orthologous sequence - C.intestinalis:620 D.pseudoobscura:620

H2XWK5              	100.00%		Q297L3              	100.00%
Bootstrap support for H2XWK5 as seed ortholog is 100%.
Bootstrap support for Q297L3 as seed ortholog is 100%.

Group of orthologs #466. Best score 619 bits
Score difference with first non-orthologous sequence - C.intestinalis:619 D.pseudoobscura:619

F6PRY2              	100.00%		B5DND3              	100.00%
Bootstrap support for F6PRY2 as seed ortholog is 100%.
Bootstrap support for B5DND3 as seed ortholog is 100%.

Group of orthologs #467. Best score 619 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 D.pseudoobscura:619

F6QFH5              	100.00%		Q2LYM2              	100.00%
Bootstrap support for F6QFH5 as seed ortholog is 95%.
Bootstrap support for Q2LYM2 as seed ortholog is 100%.

Group of orthologs #468. Best score 619 bits
Score difference with first non-orthologous sequence - C.intestinalis:619 D.pseudoobscura:619

H2Y323              	100.00%		Q29L61              	100.00%
Bootstrap support for H2Y323 as seed ortholog is 100%.
Bootstrap support for Q29L61 as seed ortholog is 100%.

Group of orthologs #469. Best score 618 bits
Score difference with first non-orthologous sequence - C.intestinalis:618 D.pseudoobscura:618

F6YKX8              	100.00%		Q293X5              	100.00%
Bootstrap support for F6YKX8 as seed ortholog is 100%.
Bootstrap support for Q293X5 as seed ortholog is 100%.

Group of orthologs #470. Best score 618 bits
Score difference with first non-orthologous sequence - C.intestinalis:618 D.pseudoobscura:618

F6ZY44              	100.00%		Q29G09              	100.00%
Bootstrap support for F6ZY44 as seed ortholog is 100%.
Bootstrap support for Q29G09 as seed ortholog is 100%.

Group of orthologs #471. Best score 617 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 D.pseudoobscura:617

F6UTP0              	100.00%		Q28YH2              	100.00%
Bootstrap support for F6UTP0 as seed ortholog is 99%.
Bootstrap support for Q28YH2 as seed ortholog is 100%.

Group of orthologs #472. Best score 617 bits
Score difference with first non-orthologous sequence - C.intestinalis:617 D.pseudoobscura:412

H2XQ03              	100.00%		Q29JK3              	100.00%
Bootstrap support for H2XQ03 as seed ortholog is 100%.
Bootstrap support for Q29JK3 as seed ortholog is 100%.

Group of orthologs #473. Best score 616 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 D.pseudoobscura:86

F6YUE7              	100.00%		Q29MQ6              	100.00%
Bootstrap support for F6YUE7 as seed ortholog is 99%.
Bootstrap support for Q29MQ6 as seed ortholog is 96%.

Group of orthologs #474. Best score 614 bits
Score difference with first non-orthologous sequence - C.intestinalis:614 D.pseudoobscura:614

F6YL86              	100.00%		Q28X05              	100.00%
Bootstrap support for F6YL86 as seed ortholog is 100%.
Bootstrap support for Q28X05 as seed ortholog is 100%.

Group of orthologs #475. Best score 614 bits
Score difference with first non-orthologous sequence - C.intestinalis:562 D.pseudoobscura:561

F6WY47              	100.00%		Q2M0V3              	100.00%
Bootstrap support for F6WY47 as seed ortholog is 100%.
Bootstrap support for Q2M0V3 as seed ortholog is 100%.

Group of orthologs #476. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 D.pseudoobscura:505

F6X7X8              	100.00%		B5DI84              	100.00%
                    	       		B5DI85              	50.72%
                    	       		B5DTJ9              	38.84%
Bootstrap support for F6X7X8 as seed ortholog is 100%.
Bootstrap support for B5DI84 as seed ortholog is 100%.

Group of orthologs #477. Best score 613 bits
Score difference with first non-orthologous sequence - C.intestinalis:613 D.pseudoobscura:613

F6W1L1              	100.00%		Q28ZV5              	100.00%
Bootstrap support for F6W1L1 as seed ortholog is 100%.
Bootstrap support for Q28ZV5 as seed ortholog is 100%.

Group of orthologs #478. Best score 611 bits
Score difference with first non-orthologous sequence - C.intestinalis:611 D.pseudoobscura:611

F6U8B5              	100.00%		B5E031              	100.00%
Bootstrap support for F6U8B5 as seed ortholog is 100%.
Bootstrap support for B5E031 as seed ortholog is 100%.

Group of orthologs #479. Best score 610 bits
Score difference with first non-orthologous sequence - C.intestinalis:610 D.pseudoobscura:174

F6Y3K6              	100.00%		Q29H73              	100.00%
                    	       		Q29E65              	32.06%
Bootstrap support for F6Y3K6 as seed ortholog is 100%.
Bootstrap support for Q29H73 as seed ortholog is 99%.

Group of orthologs #480. Best score 610 bits
Score difference with first non-orthologous sequence - C.intestinalis:610 D.pseudoobscura:567

F6QXC2              	100.00%		Q29N39              	100.00%
Bootstrap support for F6QXC2 as seed ortholog is 100%.
Bootstrap support for Q29N39 as seed ortholog is 100%.

Group of orthologs #481. Best score 610 bits
Score difference with first non-orthologous sequence - C.intestinalis:610 D.pseudoobscura:610

F6Z0E0              	100.00%		Q29JF3              	100.00%
Bootstrap support for F6Z0E0 as seed ortholog is 100%.
Bootstrap support for Q29JF3 as seed ortholog is 100%.

Group of orthologs #482. Best score 609 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 D.pseudoobscura:609

F6V7V9              	100.00%		B5DWV0              	100.00%
Bootstrap support for F6V7V9 as seed ortholog is 100%.
Bootstrap support for B5DWV0 as seed ortholog is 100%.

Group of orthologs #483. Best score 609 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 D.pseudoobscura:609

F7B6Z2              	100.00%		Q29AY5              	100.00%
Bootstrap support for F7B6Z2 as seed ortholog is 96%.
Bootstrap support for Q29AY5 as seed ortholog is 100%.

Group of orthologs #484. Best score 609 bits
Score difference with first non-orthologous sequence - C.intestinalis:609 D.pseudoobscura:312

F7AK99              	100.00%		Q2M140              	100.00%
Bootstrap support for F7AK99 as seed ortholog is 100%.
Bootstrap support for Q2M140 as seed ortholog is 100%.

Group of orthologs #485. Best score 608 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 D.pseudoobscura:279

F7BNL5              	100.00%		Q295V0              	100.00%
Bootstrap support for F7BNL5 as seed ortholog is 99%.
Bootstrap support for Q295V0 as seed ortholog is 100%.

Group of orthologs #486. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 D.pseudoobscura:607

F6WNR2              	100.00%		Q28ZB7              	100.00%
Bootstrap support for F6WNR2 as seed ortholog is 100%.
Bootstrap support for Q28ZB7 as seed ortholog is 100%.

Group of orthologs #487. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 D.pseudoobscura:607

F7BQ30              	100.00%		Q28WX4              	100.00%
Bootstrap support for F7BQ30 as seed ortholog is 100%.
Bootstrap support for Q28WX4 as seed ortholog is 100%.

Group of orthologs #488. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 D.pseudoobscura:607

F6SXQ6              	100.00%		Q29NY7              	100.00%
Bootstrap support for F6SXQ6 as seed ortholog is 100%.
Bootstrap support for Q29NY7 as seed ortholog is 100%.

Group of orthologs #489. Best score 607 bits
Score difference with first non-orthologous sequence - C.intestinalis:607 D.pseudoobscura:607

F6TG24              	100.00%		Q2LZ43              	100.00%
Bootstrap support for F6TG24 as seed ortholog is 100%.
Bootstrap support for Q2LZ43 as seed ortholog is 100%.

Group of orthologs #490. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:606 D.pseudoobscura:606

F6PXA9              	100.00%		Q29FD5              	100.00%
Bootstrap support for F6PXA9 as seed ortholog is 100%.
Bootstrap support for Q29FD5 as seed ortholog is 100%.

Group of orthologs #491. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 D.pseudoobscura:606

F6YR02              	100.00%		Q298Q8              	100.00%
Bootstrap support for F6YR02 as seed ortholog is 99%.
Bootstrap support for Q298Q8 as seed ortholog is 100%.

Group of orthologs #492. Best score 606 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 D.pseudoobscura:476

Q8T3S5              	100.00%		B5DSA2              	100.00%
Bootstrap support for Q8T3S5 as seed ortholog is 100%.
Bootstrap support for B5DSA2 as seed ortholog is 100%.

Group of orthologs #493. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 D.pseudoobscura:605

F7B7H5              	100.00%		Q2M0D6              	100.00%
                    	       		Q29JU0              	38.11%
Bootstrap support for F7B7H5 as seed ortholog is 100%.
Bootstrap support for Q2M0D6 as seed ortholog is 100%.

Group of orthologs #494. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 D.pseudoobscura:146

F7AQG9              	100.00%		B5DMD0              	100.00%
Bootstrap support for F7AQG9 as seed ortholog is 100%.
Bootstrap support for B5DMD0 as seed ortholog is 99%.

Group of orthologs #495. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 D.pseudoobscura:605

H2XYU1              	100.00%		B5DN36              	100.00%
Bootstrap support for H2XYU1 as seed ortholog is 100%.
Bootstrap support for B5DN36 as seed ortholog is 100%.

Group of orthologs #496. Best score 605 bits
Score difference with first non-orthologous sequence - C.intestinalis:605 D.pseudoobscura:605

F7APS6              	100.00%		Q29MZ7              	100.00%
Bootstrap support for F7APS6 as seed ortholog is 100%.
Bootstrap support for Q29MZ7 as seed ortholog is 100%.

Group of orthologs #497. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 D.pseudoobscura:24

F6UHH9              	100.00%		Q297X4              	100.00%
                    	       		B5DQY0              	9.02%
Bootstrap support for F6UHH9 as seed ortholog is 99%.
Bootstrap support for Q297X4 as seed ortholog is 50%.
Alternative seed ortholog is Q29J98 (24 bits away from this cluster)

Group of orthologs #498. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 D.pseudoobscura:189

F6VAS2              	100.00%		B5DIG8              	100.00%
Bootstrap support for F6VAS2 as seed ortholog is 100%.
Bootstrap support for B5DIG8 as seed ortholog is 100%.

Group of orthologs #499. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 D.pseudoobscura:604

F6RAB3              	100.00%		B5DXY4              	100.00%
Bootstrap support for F6RAB3 as seed ortholog is 100%.
Bootstrap support for B5DXY4 as seed ortholog is 100%.

Group of orthologs #500. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:604 D.pseudoobscura:604

F6R901              	100.00%		Q29N70              	100.00%
Bootstrap support for F6R901 as seed ortholog is 100%.
Bootstrap support for Q29N70 as seed ortholog is 100%.

Group of orthologs #501. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:604 D.pseudoobscura:604

F6UF05              	100.00%		Q29HD7              	100.00%
Bootstrap support for F6UF05 as seed ortholog is 100%.
Bootstrap support for Q29HD7 as seed ortholog is 100%.

Group of orthologs #502. Best score 604 bits
Score difference with first non-orthologous sequence - C.intestinalis:604 D.pseudoobscura:604

F6Y5C7              	100.00%		Q29M34              	100.00%
Bootstrap support for F6Y5C7 as seed ortholog is 100%.
Bootstrap support for Q29M34 as seed ortholog is 100%.

Group of orthologs #503. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:603 D.pseudoobscura:603

F6U609              	100.00%		B5DK75              	100.00%
Bootstrap support for F6U609 as seed ortholog is 100%.
Bootstrap support for B5DK75 as seed ortholog is 100%.

Group of orthologs #504. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 D.pseudoobscura:413

F6WNB2              	100.00%		B5E0W9              	100.00%
Bootstrap support for F6WNB2 as seed ortholog is 100%.
Bootstrap support for B5E0W9 as seed ortholog is 100%.

Group of orthologs #505. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:603 D.pseudoobscura:281

F6VDC4              	100.00%		Q29IJ1              	100.00%
Bootstrap support for F6VDC4 as seed ortholog is 100%.
Bootstrap support for Q29IJ1 as seed ortholog is 100%.

Group of orthologs #506. Best score 603 bits
Score difference with first non-orthologous sequence - C.intestinalis:603 D.pseudoobscura:603

F7BL51              	100.00%		Q297I4              	100.00%
Bootstrap support for F7BL51 as seed ortholog is 100%.
Bootstrap support for Q297I4 as seed ortholog is 100%.

Group of orthologs #507. Best score 601 bits
Score difference with first non-orthologous sequence - C.intestinalis:601 D.pseudoobscura:481

F6T4Y7              	100.00%		I5API9              	100.00%
Bootstrap support for F6T4Y7 as seed ortholog is 100%.
Bootstrap support for I5API9 as seed ortholog is 100%.

Group of orthologs #508. Best score 600 bits
Score difference with first non-orthologous sequence - C.intestinalis:600 D.pseudoobscura:600

F7A8S2              	100.00%		Q29KB7              	100.00%
Bootstrap support for F7A8S2 as seed ortholog is 100%.
Bootstrap support for Q29KB7 as seed ortholog is 100%.

Group of orthologs #509. Best score 599 bits
Score difference with first non-orthologous sequence - C.intestinalis:599 D.pseudoobscura:599

F7A5Y1              	100.00%		Q29MG3              	100.00%
Bootstrap support for F7A5Y1 as seed ortholog is 100%.
Bootstrap support for Q29MG3 as seed ortholog is 100%.

Group of orthologs #510. Best score 598 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 D.pseudoobscura:156

F6QNQ9              	100.00%		Q29GR8              	100.00%
Bootstrap support for F6QNQ9 as seed ortholog is 100%.
Bootstrap support for Q29GR8 as seed ortholog is 99%.

Group of orthologs #511. Best score 598 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 D.pseudoobscura:598

F6XZ93              	100.00%		Q29LQ4              	100.00%
Bootstrap support for F6XZ93 as seed ortholog is 100%.
Bootstrap support for Q29LQ4 as seed ortholog is 100%.

Group of orthologs #512. Best score 597 bits
Score difference with first non-orthologous sequence - C.intestinalis:597 D.pseudoobscura:449

F6RNS7              	100.00%		Q29H77              	100.00%
Bootstrap support for F6RNS7 as seed ortholog is 100%.
Bootstrap support for Q29H77 as seed ortholog is 100%.

Group of orthologs #513. Best score 597 bits
Score difference with first non-orthologous sequence - C.intestinalis:597 D.pseudoobscura:5

F6YCG7              	100.00%		Q29F42              	100.00%
Bootstrap support for F6YCG7 as seed ortholog is 100%.
Bootstrap support for Q29F42 as seed ortholog is 53%.
Alternative seed ortholog is B5DRB7 (5 bits away from this cluster)

Group of orthologs #514. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 D.pseudoobscura:37

F6Q5E4              	100.00%		B5DWV1              	100.00%
F6Y1K6              	55.43%		Q29B27              	21.43%
Bootstrap support for F6Q5E4 as seed ortholog is 100%.
Bootstrap support for B5DWV1 as seed ortholog is 94%.

Group of orthologs #515. Best score 596 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 D.pseudoobscura:157

H2XVU8              	100.00%		B5DWT5              	100.00%
Bootstrap support for H2XVU8 as seed ortholog is 100%.
Bootstrap support for B5DWT5 as seed ortholog is 99%.

Group of orthologs #516. Best score 595 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 D.pseudoobscura:170

F6TVZ8              	100.00%		Q299V2              	100.00%
Bootstrap support for F6TVZ8 as seed ortholog is 100%.
Bootstrap support for Q299V2 as seed ortholog is 100%.

Group of orthologs #517. Best score 595 bits
Score difference with first non-orthologous sequence - C.intestinalis:595 D.pseudoobscura:595

F6Z3I0              	100.00%		Q293H1              	100.00%
Bootstrap support for F6Z3I0 as seed ortholog is 100%.
Bootstrap support for Q293H1 as seed ortholog is 100%.

Group of orthologs #518. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:594 D.pseudoobscura:594

F6TPA2              	100.00%		Q295L4              	100.00%
Bootstrap support for F6TPA2 as seed ortholog is 100%.
Bootstrap support for Q295L4 as seed ortholog is 100%.

Group of orthologs #519. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:594 D.pseudoobscura:594

F6PNS6              	100.00%		Q29NR2              	100.00%
Bootstrap support for F6PNS6 as seed ortholog is 100%.
Bootstrap support for Q29NR2 as seed ortholog is 100%.

Group of orthologs #520. Best score 594 bits
Score difference with first non-orthologous sequence - C.intestinalis:594 D.pseudoobscura:594

H2Y2S2              	100.00%		Q29NP2              	100.00%
Bootstrap support for H2Y2S2 as seed ortholog is 100%.
Bootstrap support for Q29NP2 as seed ortholog is 100%.

Group of orthologs #521. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:593 D.pseudoobscura:593

F6VZ84              	100.00%		B5DNN1              	100.00%
Bootstrap support for F6VZ84 as seed ortholog is 100%.
Bootstrap support for B5DNN1 as seed ortholog is 100%.

Group of orthologs #522. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:593 D.pseudoobscura:593

F6UF57              	100.00%		Q292K5              	100.00%
Bootstrap support for F6UF57 as seed ortholog is 100%.
Bootstrap support for Q292K5 as seed ortholog is 100%.

Group of orthologs #523. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 D.pseudoobscura:376

F6Q5T5              	100.00%		Q29FR8              	100.00%
Bootstrap support for F6Q5T5 as seed ortholog is 83%.
Bootstrap support for Q29FR8 as seed ortholog is 100%.

Group of orthologs #524. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 D.pseudoobscura:289

F6U113              	100.00%		Q2M086              	100.00%
Bootstrap support for F6U113 as seed ortholog is 100%.
Bootstrap support for Q2M086 as seed ortholog is 100%.

Group of orthologs #525. Best score 593 bits
Score difference with first non-orthologous sequence - C.intestinalis:593 D.pseudoobscura:593

F7A5V7              	100.00%		Q29HL9              	100.00%
Bootstrap support for F7A5V7 as seed ortholog is 100%.
Bootstrap support for Q29HL9 as seed ortholog is 100%.

Group of orthologs #526. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:592 D.pseudoobscura:592

F6S2V8              	100.00%		B5E039              	100.00%
Bootstrap support for F6S2V8 as seed ortholog is 100%.
Bootstrap support for B5E039 as seed ortholog is 100%.

Group of orthologs #527. Best score 592 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:592

F6UTT2              	100.00%		Q29C43              	100.00%
Bootstrap support for F6UTT2 as seed ortholog is 91%.
Bootstrap support for Q29C43 as seed ortholog is 100%.

Group of orthologs #528. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 D.pseudoobscura:384

F6TMJ9              	100.00%		Q29PM0              	100.00%
Bootstrap support for F6TMJ9 as seed ortholog is 100%.
Bootstrap support for Q29PM0 as seed ortholog is 100%.

Group of orthologs #529. Best score 591 bits
Score difference with first non-orthologous sequence - C.intestinalis:591 D.pseudoobscura:591

F7B4V9              	100.00%		Q295Z3              	100.00%
Bootstrap support for F7B4V9 as seed ortholog is 100%.
Bootstrap support for Q295Z3 as seed ortholog is 100%.

Group of orthologs #530. Best score 590 bits
Score difference with first non-orthologous sequence - C.intestinalis:590 D.pseudoobscura:96

F6YND1              	100.00%		Q29KW9              	100.00%
Bootstrap support for F6YND1 as seed ortholog is 100%.
Bootstrap support for Q29KW9 as seed ortholog is 99%.

Group of orthologs #531. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:589 D.pseudoobscura:589

F6YWW9              	100.00%		Q29GI8              	100.00%
F6WDF7              	35.98%		
Bootstrap support for F6YWW9 as seed ortholog is 100%.
Bootstrap support for Q29GI8 as seed ortholog is 100%.

Group of orthologs #532. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 D.pseudoobscura:388

F6YGC1              	100.00%		Q292K7              	100.00%
Bootstrap support for F6YGC1 as seed ortholog is 100%.
Bootstrap support for Q292K7 as seed ortholog is 100%.

Group of orthologs #533. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 D.pseudoobscura:143

F6U2S1              	100.00%		Q29GV1              	100.00%
Bootstrap support for F6U2S1 as seed ortholog is 99%.
Bootstrap support for Q29GV1 as seed ortholog is 99%.

Group of orthologs #534. Best score 589 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 D.pseudoobscura:389

F7AA42              	100.00%		Q29NS3              	100.00%
Bootstrap support for F7AA42 as seed ortholog is 100%.
Bootstrap support for Q29NS3 as seed ortholog is 100%.

Group of orthologs #535. Best score 588 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 D.pseudoobscura:425

F6XLF0              	100.00%		Q29BB5              	100.00%
Bootstrap support for F6XLF0 as seed ortholog is 100%.
Bootstrap support for Q29BB5 as seed ortholog is 100%.

Group of orthologs #536. Best score 588 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 D.pseudoobscura:492

F6XK10              	100.00%		Q29E99              	100.00%
Bootstrap support for F6XK10 as seed ortholog is 100%.
Bootstrap support for Q29E99 as seed ortholog is 100%.

Group of orthologs #537. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:587 D.pseudoobscura:587

F6S6E8              	100.00%		Q29NC1              	100.00%
Bootstrap support for F6S6E8 as seed ortholog is 100%.
Bootstrap support for Q29NC1 as seed ortholog is 100%.

Group of orthologs #538. Best score 587 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 D.pseudoobscura:147

H2XP37              	100.00%		B5DZR9              	100.00%
Bootstrap support for H2XP37 as seed ortholog is 86%.
Bootstrap support for B5DZR9 as seed ortholog is 99%.

Group of orthologs #539. Best score 586 bits
Score difference with first non-orthologous sequence - C.intestinalis:586 D.pseudoobscura:586

F6VVR6              	100.00%		Q291A7              	100.00%
Bootstrap support for F6VVR6 as seed ortholog is 100%.
Bootstrap support for Q291A7 as seed ortholog is 100%.

Group of orthologs #540. Best score 585 bits
Score difference with first non-orthologous sequence - C.intestinalis:585 D.pseudoobscura:585

F6U9S8              	100.00%		B5DJY3              	100.00%
Bootstrap support for F6U9S8 as seed ortholog is 100%.
Bootstrap support for B5DJY3 as seed ortholog is 100%.

Group of orthologs #541. Best score 585 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 D.pseudoobscura:223

F6SZ54              	100.00%		Q29IF8              	100.00%
Bootstrap support for F6SZ54 as seed ortholog is 100%.
Bootstrap support for Q29IF8 as seed ortholog is 100%.

Group of orthologs #542. Best score 585 bits
Score difference with first non-orthologous sequence - C.intestinalis:527 D.pseudoobscura:521

F6UNP2              	100.00%		Q29G84              	100.00%
Bootstrap support for F6UNP2 as seed ortholog is 100%.
Bootstrap support for Q29G84 as seed ortholog is 100%.

Group of orthologs #543. Best score 585 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 D.pseudoobscura:585

F6TNP4              	100.00%		Q29MP8              	100.00%
Bootstrap support for F6TNP4 as seed ortholog is 100%.
Bootstrap support for Q29MP8 as seed ortholog is 100%.

Group of orthologs #544. Best score 585 bits
Score difference with first non-orthologous sequence - C.intestinalis:585 D.pseudoobscura:302

F6Z726              	100.00%		Q29P05              	100.00%
Bootstrap support for F6Z726 as seed ortholog is 100%.
Bootstrap support for Q29P05 as seed ortholog is 100%.

Group of orthologs #545. Best score 585 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 D.pseudoobscura:460

F7B2M5              	100.00%		Q2M109              	100.00%
Bootstrap support for F7B2M5 as seed ortholog is 100%.
Bootstrap support for Q2M109 as seed ortholog is 100%.

Group of orthologs #546. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 D.pseudoobscura:443

H2XLI2              	100.00%		Q291L9              	100.00%
Bootstrap support for H2XLI2 as seed ortholog is 100%.
Bootstrap support for Q291L9 as seed ortholog is 100%.

Group of orthologs #547. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 D.pseudoobscura:584

H2XLM6              	100.00%		Q299P7              	100.00%
Bootstrap support for H2XLM6 as seed ortholog is 100%.
Bootstrap support for Q299P7 as seed ortholog is 100%.

Group of orthologs #548. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 D.pseudoobscura:584

Q1RL58              	100.00%		B5DVK0              	100.00%
Bootstrap support for Q1RL58 as seed ortholog is 100%.
Bootstrap support for B5DVK0 as seed ortholog is 100%.

Group of orthologs #549. Best score 584 bits
Score difference with first non-orthologous sequence - C.intestinalis:584 D.pseudoobscura:584

H2XXL7              	100.00%		Q298T8              	100.00%
Bootstrap support for H2XXL7 as seed ortholog is 100%.
Bootstrap support for Q298T8 as seed ortholog is 100%.

Group of orthologs #550. Best score 583 bits
Score difference with first non-orthologous sequence - C.intestinalis:583 D.pseudoobscura:445

H2XXR6              	100.00%		B5DPG7              	100.00%
Bootstrap support for H2XXR6 as seed ortholog is 100%.
Bootstrap support for B5DPG7 as seed ortholog is 100%.

Group of orthologs #551. Best score 583 bits
Score difference with first non-orthologous sequence - C.intestinalis:583 D.pseudoobscura:583

F6W1Y5              	100.00%		Q29GJ5              	100.00%
Bootstrap support for F6W1Y5 as seed ortholog is 100%.
Bootstrap support for Q29GJ5 as seed ortholog is 100%.

Group of orthologs #552. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:582 D.pseudoobscura:582

F6XH38              	100.00%		Q29HF0              	100.00%
F6ZGX7              	10.54%		
F6ZGZ0              	8.46%		
Bootstrap support for F6XH38 as seed ortholog is 100%.
Bootstrap support for Q29HF0 as seed ortholog is 100%.

Group of orthologs #553. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 D.pseudoobscura:63

F6TPD4              	100.00%		B5DP91              	100.00%
                    	       		Q29DR4              	46.29%
Bootstrap support for F6TPD4 as seed ortholog is 97%.
Bootstrap support for B5DP91 as seed ortholog is 81%.

Group of orthologs #554. Best score 582 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 D.pseudoobscura:582

F6VTM3              	100.00%		Q28YZ8              	100.00%
Bootstrap support for F6VTM3 as seed ortholog is 100%.
Bootstrap support for Q28YZ8 as seed ortholog is 100%.

Group of orthologs #555. Best score 581 bits
Score difference with first non-orthologous sequence - C.intestinalis:581 D.pseudoobscura:280

F6XKK7              	100.00%		B5DN97              	100.00%
Bootstrap support for F6XKK7 as seed ortholog is 100%.
Bootstrap support for B5DN97 as seed ortholog is 100%.

Group of orthologs #556. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 D.pseudoobscura:311

F6V5P8              	100.00%		Q29BR7              	100.00%
                    	       		Q290Y7              	30.38%
Bootstrap support for F6V5P8 as seed ortholog is 100%.
Bootstrap support for Q29BR7 as seed ortholog is 100%.

Group of orthologs #557. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 D.pseudoobscura:481

F6S902              	100.00%		Q28YP7              	100.00%
Bootstrap support for F6S902 as seed ortholog is 100%.
Bootstrap support for Q28YP7 as seed ortholog is 100%.

Group of orthologs #558. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 D.pseudoobscura:243

F6YKJ2              	100.00%		Q29PM8              	100.00%
Bootstrap support for F6YKJ2 as seed ortholog is 100%.
Bootstrap support for Q29PM8 as seed ortholog is 100%.

Group of orthologs #559. Best score 579 bits
Score difference with first non-orthologous sequence - C.intestinalis:579 D.pseudoobscura:579

H2XW04              	100.00%		Q291L5              	100.00%
Bootstrap support for H2XW04 as seed ortholog is 100%.
Bootstrap support for Q291L5 as seed ortholog is 100%.

Group of orthologs #560. Best score 578 bits
Score difference with first non-orthologous sequence - C.intestinalis:578 D.pseudoobscura:578

F6XJU3              	100.00%		Q28XF3              	100.00%
Bootstrap support for F6XJU3 as seed ortholog is 100%.
Bootstrap support for Q28XF3 as seed ortholog is 100%.

Group of orthologs #561. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:577 D.pseudoobscura:577

F6VMS4              	100.00%		Q293J9              	100.00%
Bootstrap support for F6VMS4 as seed ortholog is 100%.
Bootstrap support for Q293J9 as seed ortholog is 100%.

Group of orthologs #562. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:577 D.pseudoobscura:577

F6QBM2              	100.00%		Q2M144              	100.00%
Bootstrap support for F6QBM2 as seed ortholog is 100%.
Bootstrap support for Q2M144 as seed ortholog is 100%.

Group of orthologs #563. Best score 577 bits
Score difference with first non-orthologous sequence - C.intestinalis:577 D.pseudoobscura:577

F6WHS8              	100.00%		Q29GA0              	100.00%
Bootstrap support for F6WHS8 as seed ortholog is 100%.
Bootstrap support for Q29GA0 as seed ortholog is 100%.

Group of orthologs #564. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 D.pseudoobscura:519

F6YFU4              	100.00%		Q299V8              	100.00%
F6YFZ5              	22.62%		
Bootstrap support for F6YFU4 as seed ortholog is 100%.
Bootstrap support for Q299V8 as seed ortholog is 100%.

Group of orthologs #565. Best score 576 bits
Score difference with first non-orthologous sequence - C.intestinalis:576 D.pseudoobscura:576

F6W067              	100.00%		Q290U2              	100.00%
Bootstrap support for F6W067 as seed ortholog is 100%.
Bootstrap support for Q290U2 as seed ortholog is 100%.

Group of orthologs #566. Best score 575 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 D.pseudoobscura:282

F6S4F7              	100.00%		Q294V1              	100.00%
Bootstrap support for F6S4F7 as seed ortholog is 100%.
Bootstrap support for Q294V1 as seed ortholog is 100%.

Group of orthologs #567. Best score 575 bits
Score difference with first non-orthologous sequence - C.intestinalis:575 D.pseudoobscura:366

F6QQX7              	100.00%		Q29BH4              	100.00%
Bootstrap support for F6QQX7 as seed ortholog is 100%.
Bootstrap support for Q29BH4 as seed ortholog is 99%.

Group of orthologs #568. Best score 575 bits
Score difference with first non-orthologous sequence - C.intestinalis:575 D.pseudoobscura:575

F7A7C3              	100.00%		Q297M4              	100.00%
Bootstrap support for F7A7C3 as seed ortholog is 100%.
Bootstrap support for Q297M4 as seed ortholog is 100%.

Group of orthologs #569. Best score 574 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 D.pseudoobscura:443

F7BBT3              	100.00%		B5DPP1              	100.00%
Bootstrap support for F7BBT3 as seed ortholog is 100%.
Bootstrap support for B5DPP1 as seed ortholog is 100%.

Group of orthologs #570. Best score 573 bits
Score difference with first non-orthologous sequence - C.intestinalis:573 D.pseudoobscura:573

F6SNM2              	100.00%		Q291S1              	100.00%
Bootstrap support for F6SNM2 as seed ortholog is 100%.
Bootstrap support for Q291S1 as seed ortholog is 100%.

Group of orthologs #571. Best score 573 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 D.pseudoobscura:278

F7B875              	100.00%		Q29DY1              	100.00%
Bootstrap support for F7B875 as seed ortholog is 100%.
Bootstrap support for Q29DY1 as seed ortholog is 100%.

Group of orthologs #572. Best score 573 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 D.pseudoobscura:55

F7B991              	100.00%		Q29IH5              	100.00%
Bootstrap support for F7B991 as seed ortholog is 100%.
Bootstrap support for Q29IH5 as seed ortholog is 99%.

Group of orthologs #573. Best score 572 bits
Score difference with first non-orthologous sequence - C.intestinalis:572 D.pseudoobscura:572

F6Z5V2              	100.00%		Q2LYM4              	100.00%
Bootstrap support for F6Z5V2 as seed ortholog is 100%.
Bootstrap support for Q2LYM4 as seed ortholog is 100%.

Group of orthologs #574. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 D.pseudoobscura:571

F6T636              	100.00%		Q29BY7              	100.00%
Bootstrap support for F6T636 as seed ortholog is 100%.
Bootstrap support for Q29BY7 as seed ortholog is 100%.

Group of orthologs #575. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 D.pseudoobscura:571

F6X0I3              	100.00%		Q294A1              	100.00%
Bootstrap support for F6X0I3 as seed ortholog is 100%.
Bootstrap support for Q294A1 as seed ortholog is 100%.

Group of orthologs #576. Best score 571 bits
Score difference with first non-orthologous sequence - C.intestinalis:571 D.pseudoobscura:244

F6WAT8              	100.00%		Q298Z1              	100.00%
Bootstrap support for F6WAT8 as seed ortholog is 100%.
Bootstrap support for Q298Z1 as seed ortholog is 99%.

Group of orthologs #577. Best score 570 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 D.pseudoobscura:467

F7AMH0              	100.00%		B5DI07              	100.00%
Bootstrap support for F7AMH0 as seed ortholog is 100%.
Bootstrap support for B5DI07 as seed ortholog is 100%.

Group of orthologs #578. Best score 570 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 D.pseudoobscura:570

F6Z7L9              	100.00%		Q29DE7              	100.00%
Bootstrap support for F6Z7L9 as seed ortholog is 100%.
Bootstrap support for Q29DE7 as seed ortholog is 100%.

Group of orthologs #579. Best score 569 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 D.pseudoobscura:243

F6PH07              	100.00%		Q29NB1              	100.00%
Bootstrap support for F6PH07 as seed ortholog is 100%.
Bootstrap support for Q29NB1 as seed ortholog is 100%.

Group of orthologs #580. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 D.pseudoobscura:515

F6U0I8              	100.00%		I5APH5              	100.00%
Bootstrap support for F6U0I8 as seed ortholog is 100%.
Bootstrap support for I5APH5 as seed ortholog is 100%.

Group of orthologs #581. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 D.pseudoobscura:390

F6TWF6              	100.00%		Q29DH5              	100.00%
Bootstrap support for F6TWF6 as seed ortholog is 100%.
Bootstrap support for Q29DH5 as seed ortholog is 100%.

Group of orthologs #582. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 D.pseudoobscura:136

F6Y9D9              	100.00%		Q29PB0              	100.00%
Bootstrap support for F6Y9D9 as seed ortholog is 100%.
Bootstrap support for Q29PB0 as seed ortholog is 94%.

Group of orthologs #583. Best score 568 bits
Score difference with first non-orthologous sequence - C.intestinalis:568 D.pseudoobscura:568

H2XZM0              	100.00%		Q2LZG0              	100.00%
Bootstrap support for H2XZM0 as seed ortholog is 100%.
Bootstrap support for Q2LZG0 as seed ortholog is 100%.

Group of orthologs #584. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 D.pseudoobscura:115

F6XBC5              	100.00%		Q28YP2              	100.00%
Bootstrap support for F6XBC5 as seed ortholog is 100%.
Bootstrap support for Q28YP2 as seed ortholog is 98%.

Group of orthologs #585. Best score 567 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 D.pseudoobscura:74

F6QN34              	100.00%		Q29LA0              	100.00%
Bootstrap support for F6QN34 as seed ortholog is 97%.
Bootstrap support for Q29LA0 as seed ortholog is 93%.

Group of orthologs #586. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 D.pseudoobscura:483

F6RKQ2              	100.00%		Q28YR7              	100.00%
Bootstrap support for F6RKQ2 as seed ortholog is 100%.
Bootstrap support for Q28YR7 as seed ortholog is 100%.

Group of orthologs #587. Best score 566 bits
Score difference with first non-orthologous sequence - C.intestinalis:566 D.pseudoobscura:566

H2Y288              	100.00%		Q2LYP0              	100.00%
Bootstrap support for H2Y288 as seed ortholog is 100%.
Bootstrap support for Q2LYP0 as seed ortholog is 100%.

Group of orthologs #588. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 D.pseudoobscura:248

F7AW67              	100.00%		B5DSF9              	100.00%
Bootstrap support for F7AW67 as seed ortholog is 100%.
Bootstrap support for B5DSF9 as seed ortholog is 100%.

Group of orthologs #589. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:565 D.pseudoobscura:287

H2XU69              	100.00%		Q296Q5              	100.00%
Bootstrap support for H2XU69 as seed ortholog is 100%.
Bootstrap support for Q296Q5 as seed ortholog is 99%.

Group of orthologs #590. Best score 565 bits
Score difference with first non-orthologous sequence - C.intestinalis:565 D.pseudoobscura:565

H2XR85              	100.00%		Q2LZA7              	100.00%
Bootstrap support for H2XR85 as seed ortholog is 100%.
Bootstrap support for Q2LZA7 as seed ortholog is 100%.

Group of orthologs #591. Best score 563 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 D.pseudoobscura:563

F6TAP2              	100.00%		Q291Q9              	100.00%
Bootstrap support for F6TAP2 as seed ortholog is 100%.
Bootstrap support for Q291Q9 as seed ortholog is 100%.

Group of orthologs #592. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 D.pseudoobscura:177

F6ZBI9              	100.00%		Q29CI1              	100.00%
Bootstrap support for F6ZBI9 as seed ortholog is 100%.
Bootstrap support for Q29CI1 as seed ortholog is 99%.

Group of orthologs #593. Best score 562 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 D.pseudoobscura:126

H2XPB4              	100.00%		Q2M001              	100.00%
Bootstrap support for H2XPB4 as seed ortholog is 99%.
Bootstrap support for Q2M001 as seed ortholog is 99%.

Group of orthologs #594. Best score 561 bits
Score difference with first non-orthologous sequence - C.intestinalis:561 D.pseudoobscura:561

H2XJF4              	100.00%		Q29H49              	100.00%
Bootstrap support for H2XJF4 as seed ortholog is 100%.
Bootstrap support for Q29H49 as seed ortholog is 100%.

Group of orthologs #595. Best score 560 bits
Score difference with first non-orthologous sequence - C.intestinalis:560 D.pseudoobscura:560

F7B059              	100.00%		B5DL99              	100.00%
Bootstrap support for F7B059 as seed ortholog is 100%.
Bootstrap support for B5DL99 as seed ortholog is 100%.

Group of orthologs #596. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:559 D.pseudoobscura:559

F6XVY9              	100.00%		Q2LZ44              	100.00%
Bootstrap support for F6XVY9 as seed ortholog is 100%.
Bootstrap support for Q2LZ44 as seed ortholog is 100%.

Group of orthologs #597. Best score 559 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 D.pseudoobscura:495

H2Y130              	100.00%		Q295J1              	100.00%
Bootstrap support for H2Y130 as seed ortholog is 100%.
Bootstrap support for Q295J1 as seed ortholog is 100%.

Group of orthologs #598. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 D.pseudoobscura:223

F6XDI5              	100.00%		Q29G85              	100.00%
Bootstrap support for F6XDI5 as seed ortholog is 100%.
Bootstrap support for Q29G85 as seed ortholog is 100%.

Group of orthologs #599. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 D.pseudoobscura:558

H2XZT6              	100.00%		Q28X80              	100.00%
Bootstrap support for H2XZT6 as seed ortholog is 100%.
Bootstrap support for Q28X80 as seed ortholog is 100%.

Group of orthologs #600. Best score 558 bits
Score difference with first non-orthologous sequence - C.intestinalis:558 D.pseudoobscura:558

H2XYJ2              	100.00%		Q29GY7              	100.00%
Bootstrap support for H2XYJ2 as seed ortholog is 100%.
Bootstrap support for Q29GY7 as seed ortholog is 100%.

Group of orthologs #601. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:557 D.pseudoobscura:557

H2XZ65              	100.00%		Q294L1              	100.00%
                    	       		Q29DS4              	100.00%
Bootstrap support for H2XZ65 as seed ortholog is 100%.
Bootstrap support for Q294L1 as seed ortholog is 100%.
Bootstrap support for Q29DS4 as seed ortholog is 100%.

Group of orthologs #602. Best score 557 bits
Score difference with first non-orthologous sequence - C.intestinalis:557 D.pseudoobscura:557

F6YIL9              	100.00%		Q29PI0              	100.00%
Bootstrap support for F6YIL9 as seed ortholog is 100%.
Bootstrap support for Q29PI0 as seed ortholog is 100%.

Group of orthologs #603. Best score 556 bits
Score difference with first non-orthologous sequence - C.intestinalis:556 D.pseudoobscura:556

F7AQA9              	100.00%		B5DLB2              	100.00%
Bootstrap support for F7AQA9 as seed ortholog is 100%.
Bootstrap support for B5DLB2 as seed ortholog is 100%.

Group of orthologs #604. Best score 556 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 D.pseudoobscura:388

F6UGF1              	100.00%		Q2LYK4              	100.00%
Bootstrap support for F6UGF1 as seed ortholog is 100%.
Bootstrap support for Q2LYK4 as seed ortholog is 100%.

Group of orthologs #605. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 D.pseudoobscura:555

F6UBT3              	100.00%		Q29AI0              	100.00%
Bootstrap support for F6UBT3 as seed ortholog is 100%.
Bootstrap support for Q29AI0 as seed ortholog is 100%.

Group of orthologs #606. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 D.pseudoobscura:555

F6YX67              	100.00%		Q28XY9              	100.00%
Bootstrap support for F6YX67 as seed ortholog is 100%.
Bootstrap support for Q28XY9 as seed ortholog is 100%.

Group of orthologs #607. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:555 D.pseudoobscura:555

F6Y2U7              	100.00%		Q29BL9              	100.00%
Bootstrap support for F6Y2U7 as seed ortholog is 100%.
Bootstrap support for Q29BL9 as seed ortholog is 100%.

Group of orthologs #608. Best score 555 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 D.pseudoobscura:436

F7B040              	100.00%		Q29EQ8              	100.00%
Bootstrap support for F7B040 as seed ortholog is 100%.
Bootstrap support for Q29EQ8 as seed ortholog is 100%.

Group of orthologs #609. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:554 D.pseudoobscura:554

F6VQX3              	100.00%		B5DVK9              	100.00%
Bootstrap support for F6VQX3 as seed ortholog is 100%.
Bootstrap support for B5DVK9 as seed ortholog is 100%.

Group of orthologs #610. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:554 D.pseudoobscura:554

F6R854              	100.00%		Q293I0              	100.00%
Bootstrap support for F6R854 as seed ortholog is 100%.
Bootstrap support for Q293I0 as seed ortholog is 100%.

Group of orthologs #611. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 D.pseudoobscura:384

F6Q106              	100.00%		Q29PD4              	100.00%
Bootstrap support for F6Q106 as seed ortholog is 100%.
Bootstrap support for Q29PD4 as seed ortholog is 100%.

Group of orthologs #612. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:554 D.pseudoobscura:554

F7B0J8              	100.00%		B5E1G0              	100.00%
Bootstrap support for F7B0J8 as seed ortholog is 100%.
Bootstrap support for B5E1G0 as seed ortholog is 100%.

Group of orthologs #613. Best score 554 bits
Score difference with first non-orthologous sequence - C.intestinalis:554 D.pseudoobscura:554

H2Y0G9              	100.00%		Q29MN6              	100.00%
Bootstrap support for H2Y0G9 as seed ortholog is 100%.
Bootstrap support for Q29MN6 as seed ortholog is 100%.

Group of orthologs #614. Best score 553 bits
Score difference with first non-orthologous sequence - C.intestinalis:553 D.pseudoobscura:311

F6ZTX2              	100.00%		B5DZS7              	100.00%
                    	       		O18552              	14.01%
Bootstrap support for F6ZTX2 as seed ortholog is 100%.
Bootstrap support for B5DZS7 as seed ortholog is 100%.

Group of orthologs #615. Best score 552 bits
Score difference with first non-orthologous sequence - C.intestinalis:552 D.pseudoobscura:552

H2XYE1              	100.00%		Q290C4              	100.00%
Bootstrap support for H2XYE1 as seed ortholog is 100%.
Bootstrap support for Q290C4 as seed ortholog is 100%.

Group of orthologs #616. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 D.pseudoobscura:219

F6QBL6              	100.00%		B5DLC0              	100.00%
Bootstrap support for F6QBL6 as seed ortholog is 97%.
Bootstrap support for B5DLC0 as seed ortholog is 99%.

Group of orthologs #617. Best score 550 bits
Score difference with first non-orthologous sequence - C.intestinalis:550 D.pseudoobscura:550

H2XM91              	100.00%		Q29FD8              	100.00%
Bootstrap support for H2XM91 as seed ortholog is 100%.
Bootstrap support for Q29FD8 as seed ortholog is 100%.

Group of orthologs #618. Best score 548 bits
Score difference with first non-orthologous sequence - C.intestinalis:548 D.pseudoobscura:548

F6UK15              	100.00%		Q29GG6              	100.00%
Bootstrap support for F6UK15 as seed ortholog is 100%.
Bootstrap support for Q29GG6 as seed ortholog is 100%.

Group of orthologs #619. Best score 548 bits
Score difference with first non-orthologous sequence - C.intestinalis:548 D.pseudoobscura:548

F6VCN7              	100.00%		Q2M0L9              	100.00%
Bootstrap support for F6VCN7 as seed ortholog is 100%.
Bootstrap support for Q2M0L9 as seed ortholog is 100%.

Group of orthologs #620. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:481 D.pseudoobscura:44

F6SG33              	100.00%		Q29EQ6              	100.00%
Bootstrap support for F6SG33 as seed ortholog is 100%.
Bootstrap support for Q29EQ6 as seed ortholog is 83%.

Group of orthologs #621. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:547 D.pseudoobscura:547

F6Z7N3              	100.00%		Q29CY3              	100.00%
Bootstrap support for F6Z7N3 as seed ortholog is 100%.
Bootstrap support for Q29CY3 as seed ortholog is 100%.

Group of orthologs #622. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 D.pseudoobscura:301

H2XK60              	100.00%		Q29CZ7              	100.00%
Bootstrap support for H2XK60 as seed ortholog is 100%.
Bootstrap support for Q29CZ7 as seed ortholog is 100%.

Group of orthologs #623. Best score 547 bits
Score difference with first non-orthologous sequence - C.intestinalis:547 D.pseudoobscura:547

H2XLP3              	100.00%		Q29L00              	100.00%
Bootstrap support for H2XLP3 as seed ortholog is 100%.
Bootstrap support for Q29L00 as seed ortholog is 100%.

Group of orthologs #624. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:106

H2XQ28              	100.00%		Q29H63              	100.00%
                    	       		B5DVS7              	5.62%
Bootstrap support for H2XQ28 as seed ortholog is 98%.
Bootstrap support for Q29H63 as seed ortholog is 96%.

Group of orthologs #625. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 D.pseudoobscura:272

F6PLA8              	100.00%		Q295U8              	100.00%
Bootstrap support for F6PLA8 as seed ortholog is 100%.
Bootstrap support for Q295U8 as seed ortholog is 100%.

Group of orthologs #626. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 D.pseudoobscura:165

F6Q2J0              	100.00%		Q295T1              	100.00%
Bootstrap support for F6Q2J0 as seed ortholog is 100%.
Bootstrap support for Q295T1 as seed ortholog is 99%.

Group of orthologs #627. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 D.pseudoobscura:282

F6T7R0              	100.00%		Q2LZX7              	100.00%
Bootstrap support for F6T7R0 as seed ortholog is 100%.
Bootstrap support for Q2LZX7 as seed ortholog is 100%.

Group of orthologs #628. Best score 546 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 D.pseudoobscura:234

F7AKC9              	100.00%		Q297H6              	100.00%
Bootstrap support for F7AKC9 as seed ortholog is 100%.
Bootstrap support for Q297H6 as seed ortholog is 100%.

Group of orthologs #629. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 D.pseudoobscura:545

H2XWM6              	100.00%		Q295Q1              	100.00%
Bootstrap support for H2XWM6 as seed ortholog is 100%.
Bootstrap support for Q295Q1 as seed ortholog is 100%.

Group of orthologs #630. Best score 545 bits
Score difference with first non-orthologous sequence - C.intestinalis:545 D.pseudoobscura:209

F6ZWA3              	100.00%		Q2LZ77              	100.00%
Bootstrap support for F6ZWA3 as seed ortholog is 100%.
Bootstrap support for Q2LZ77 as seed ortholog is 100%.

Group of orthologs #631. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 D.pseudoobscura:544

F6QIK7              	100.00%		B5DKL9              	100.00%
Bootstrap support for F6QIK7 as seed ortholog is 100%.
Bootstrap support for B5DKL9 as seed ortholog is 100%.

Group of orthologs #632. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 D.pseudoobscura:98

F6U1L2              	100.00%		Q294T1              	100.00%
Bootstrap support for F6U1L2 as seed ortholog is 100%.
Bootstrap support for Q294T1 as seed ortholog is 99%.

Group of orthologs #633. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 D.pseudoobscura:142

F6X9M4              	100.00%		Q28ZU2              	100.00%
Bootstrap support for F6X9M4 as seed ortholog is 51%.
Alternative seed ortholog is F6WX88 (2 bits away from this cluster)
Bootstrap support for Q28ZU2 as seed ortholog is 100%.

Group of orthologs #634. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 D.pseudoobscura:544

F6ZGT0              	100.00%		I5AMW3              	100.00%
Bootstrap support for F6ZGT0 as seed ortholog is 100%.
Bootstrap support for I5AMW3 as seed ortholog is 100%.

Group of orthologs #635. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 D.pseudoobscura:544

F6SLC8              	100.00%		Q29FX8              	100.00%
Bootstrap support for F6SLC8 as seed ortholog is 100%.
Bootstrap support for Q29FX8 as seed ortholog is 100%.

Group of orthologs #636. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 D.pseudoobscura:166

F7APB5              	100.00%		Q28X55              	100.00%
Bootstrap support for F7APB5 as seed ortholog is 100%.
Bootstrap support for Q28X55 as seed ortholog is 100%.

Group of orthologs #637. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 D.pseudoobscura:544

Q4H372              	100.00%		B5DXU5              	100.00%
Bootstrap support for Q4H372 as seed ortholog is 100%.
Bootstrap support for B5DXU5 as seed ortholog is 100%.

Group of orthologs #638. Best score 544 bits
Score difference with first non-orthologous sequence - C.intestinalis:544 D.pseudoobscura:544

H2Y2K4              	100.00%		Q299D2              	100.00%
Bootstrap support for H2Y2K4 as seed ortholog is 100%.
Bootstrap support for Q299D2 as seed ortholog is 100%.

Group of orthologs #639. Best score 543 bits
Score difference with first non-orthologous sequence - C.intestinalis:543 D.pseudoobscura:543

F7ADN1              	100.00%		B5DI77              	100.00%
Bootstrap support for F7ADN1 as seed ortholog is 100%.
Bootstrap support for B5DI77 as seed ortholog is 100%.

Group of orthologs #640. Best score 542 bits
Score difference with first non-orthologous sequence - C.intestinalis:542 D.pseudoobscura:542

F6R815              	100.00%		Q08470              	100.00%
Bootstrap support for F6R815 as seed ortholog is 100%.
Bootstrap support for Q08470 as seed ortholog is 100%.

Group of orthologs #641. Best score 542 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 D.pseudoobscura:181

F6SDI7              	100.00%		Q29CD4              	100.00%
Bootstrap support for F6SDI7 as seed ortholog is 100%.
Bootstrap support for Q29CD4 as seed ortholog is 100%.

Group of orthologs #642. Best score 542 bits
Score difference with first non-orthologous sequence - C.intestinalis:542 D.pseudoobscura:542

F7ANB6              	100.00%		Q29L58              	100.00%
Bootstrap support for F7ANB6 as seed ortholog is 100%.
Bootstrap support for Q29L58 as seed ortholog is 100%.

Group of orthologs #643. Best score 542 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 D.pseudoobscura:217

F7AQ62              	100.00%		Q29P68              	100.00%
Bootstrap support for F7AQ62 as seed ortholog is 100%.
Bootstrap support for Q29P68 as seed ortholog is 99%.

Group of orthologs #644. Best score 542 bits
Score difference with first non-orthologous sequence - C.intestinalis:542 D.pseudoobscura:542

H2XVQ2              	100.00%		Q29NS2              	100.00%
Bootstrap support for H2XVQ2 as seed ortholog is 100%.
Bootstrap support for Q29NS2 as seed ortholog is 100%.

Group of orthologs #645. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:541 D.pseudoobscura:541

F6ZWW6              	100.00%		Q28ZB9              	100.00%
                    	       		Q291F3              	20.24%
Bootstrap support for F6ZWW6 as seed ortholog is 100%.
Bootstrap support for Q28ZB9 as seed ortholog is 100%.

Group of orthologs #646. Best score 541 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 D.pseudoobscura:541

F6WWM2              	100.00%		Q29CY9              	100.00%
Bootstrap support for F6WWM2 as seed ortholog is 100%.
Bootstrap support for Q29CY9 as seed ortholog is 100%.

Group of orthologs #647. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 D.pseudoobscura:540

F6SKU8              	100.00%		Q28WJ8              	100.00%
                    	       		B5DZL8              	31.39%
Bootstrap support for F6SKU8 as seed ortholog is 100%.
Bootstrap support for Q28WJ8 as seed ortholog is 100%.

Group of orthologs #648. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 D.pseudoobscura:428

F6TTZ5              	100.00%		B5DI51              	100.00%
Bootstrap support for F6TTZ5 as seed ortholog is 100%.
Bootstrap support for B5DI51 as seed ortholog is 100%.

Group of orthologs #649. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 D.pseudoobscura:540

F6T0L0              	100.00%		Q29JQ0              	100.00%
Bootstrap support for F6T0L0 as seed ortholog is 100%.
Bootstrap support for Q29JQ0 as seed ortholog is 100%.

Group of orthologs #650. Best score 540 bits
Score difference with first non-orthologous sequence - C.intestinalis:540 D.pseudoobscura:139

F6XG08              	100.00%		Q2LZW7              	100.00%
Bootstrap support for F6XG08 as seed ortholog is 100%.
Bootstrap support for Q2LZW7 as seed ortholog is 99%.

Group of orthologs #651. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 D.pseudoobscura:539

F7AP89              	100.00%		B5DMB6              	100.00%
Bootstrap support for F7AP89 as seed ortholog is 100%.
Bootstrap support for B5DMB6 as seed ortholog is 100%.

Group of orthologs #652. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 D.pseudoobscura:436

F6V299              	100.00%		Q299M8              	100.00%
Bootstrap support for F6V299 as seed ortholog is 100%.
Bootstrap support for Q299M8 as seed ortholog is 100%.

Group of orthologs #653. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 D.pseudoobscura:539

F7B0I1              	100.00%		B5E078              	100.00%
Bootstrap support for F7B0I1 as seed ortholog is 100%.
Bootstrap support for B5E078 as seed ortholog is 100%.

Group of orthologs #654. Best score 539 bits
Score difference with first non-orthologous sequence - C.intestinalis:539 D.pseudoobscura:351

H2XT62              	100.00%		Q29H36              	100.00%
Bootstrap support for H2XT62 as seed ortholog is 100%.
Bootstrap support for Q29H36 as seed ortholog is 100%.

Group of orthologs #655. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 D.pseudoobscura:538

F6V549              	100.00%		Q29B11              	100.00%
Bootstrap support for F6V549 as seed ortholog is 100%.
Bootstrap support for Q29B11 as seed ortholog is 100%.

Group of orthologs #656. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 D.pseudoobscura:156

F6UAX7              	100.00%		Q29GJ0              	100.00%
Bootstrap support for F6UAX7 as seed ortholog is 100%.
Bootstrap support for Q29GJ0 as seed ortholog is 99%.

Group of orthologs #657. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 D.pseudoobscura:349

F6YGI4              	100.00%		Q29ET4              	100.00%
Bootstrap support for F6YGI4 as seed ortholog is 100%.
Bootstrap support for Q29ET4 as seed ortholog is 100%.

Group of orthologs #658. Best score 538 bits
Score difference with first non-orthologous sequence - C.intestinalis:538 D.pseudoobscura:538

F6ZAD3              	100.00%		Q2M0Y0              	100.00%
Bootstrap support for F6ZAD3 as seed ortholog is 100%.
Bootstrap support for Q2M0Y0 as seed ortholog is 100%.

Group of orthologs #659. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 D.pseudoobscura:537

F6QI37              	100.00%		Q293L9              	100.00%
Bootstrap support for F6QI37 as seed ortholog is 100%.
Bootstrap support for Q293L9 as seed ortholog is 100%.

Group of orthologs #660. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 D.pseudoobscura:226

F6R5L0              	100.00%		Q29D45              	100.00%
Bootstrap support for F6R5L0 as seed ortholog is 100%.
Bootstrap support for Q29D45 as seed ortholog is 100%.

Group of orthologs #661. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 D.pseudoobscura:537

F6QY24              	100.00%		Q29HG5              	100.00%
Bootstrap support for F6QY24 as seed ortholog is 100%.
Bootstrap support for Q29HG5 as seed ortholog is 100%.

Group of orthologs #662. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:537 D.pseudoobscura:537

F6VDB6              	100.00%		Q29GZ5              	100.00%
Bootstrap support for F6VDB6 as seed ortholog is 100%.
Bootstrap support for Q29GZ5 as seed ortholog is 100%.

Group of orthologs #663. Best score 537 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 D.pseudoobscura:160

H2Y169              	100.00%		Q292K3              	100.00%
Bootstrap support for H2Y169 as seed ortholog is 100%.
Bootstrap support for Q292K3 as seed ortholog is 99%.

Group of orthologs #664. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 D.pseudoobscura:536

F6UQL0              	100.00%		Q291S0              	100.00%
Bootstrap support for F6UQL0 as seed ortholog is 100%.
Bootstrap support for Q291S0 as seed ortholog is 100%.

Group of orthologs #665. Best score 536 bits
Score difference with first non-orthologous sequence - C.intestinalis:536 D.pseudoobscura:536

H2XJK0              	100.00%		Q28YF4              	100.00%
Bootstrap support for H2XJK0 as seed ortholog is 100%.
Bootstrap support for Q28YF4 as seed ortholog is 100%.

Group of orthologs #666. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 D.pseudoobscura:317

F6U7M8              	100.00%		Q296J0              	100.00%
Bootstrap support for F6U7M8 as seed ortholog is 100%.
Bootstrap support for Q296J0 as seed ortholog is 100%.

Group of orthologs #667. Best score 535 bits
Score difference with first non-orthologous sequence - C.intestinalis:535 D.pseudoobscura:347

F6XIQ9              	100.00%		Q29LN4              	100.00%
Bootstrap support for F6XIQ9 as seed ortholog is 100%.
Bootstrap support for Q29LN4 as seed ortholog is 100%.

Group of orthologs #668. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 D.pseudoobscura:534

F6VG31              	100.00%		Q290S8              	100.00%
Bootstrap support for F6VG31 as seed ortholog is 100%.
Bootstrap support for Q290S8 as seed ortholog is 100%.

Group of orthologs #669. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 D.pseudoobscura:534

F6ZVE7              	100.00%		Q291S8              	100.00%
Bootstrap support for F6ZVE7 as seed ortholog is 100%.
Bootstrap support for Q291S8 as seed ortholog is 100%.

Group of orthologs #670. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:534 D.pseudoobscura:534

F7B5A5              	100.00%		Q293T1              	100.00%
Bootstrap support for F7B5A5 as seed ortholog is 100%.
Bootstrap support for Q293T1 as seed ortholog is 100%.

Group of orthologs #671. Best score 534 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 D.pseudoobscura:440

F7B5K2              	100.00%		Q29A76              	100.00%
Bootstrap support for F7B5K2 as seed ortholog is 100%.
Bootstrap support for Q29A76 as seed ortholog is 100%.

Group of orthologs #672. Best score 533 bits
Score difference with first non-orthologous sequence - C.intestinalis:533 D.pseudoobscura:97

F7A4Y2              	100.00%		Q29MD8              	100.00%
Bootstrap support for F7A4Y2 as seed ortholog is 100%.
Bootstrap support for Q29MD8 as seed ortholog is 98%.

Group of orthologs #673. Best score 533 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 D.pseudoobscura:287

Q9NL43              	100.00%		Q29BB9              	100.00%
Bootstrap support for Q9NL43 as seed ortholog is 100%.
Bootstrap support for Q29BB9 as seed ortholog is 100%.

Group of orthologs #674. Best score 532 bits
Score difference with first non-orthologous sequence - C.intestinalis:532 D.pseudoobscura:445

F6YC60              	100.00%		Q29DA4              	100.00%
Bootstrap support for F6YC60 as seed ortholog is 100%.
Bootstrap support for Q29DA4 as seed ortholog is 100%.

Group of orthologs #675. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:458

F7B684              	100.00%		Q29KS1              	100.00%
                    	       		B5DZA9              	52.47%
Bootstrap support for F7B684 as seed ortholog is 99%.
Bootstrap support for Q29KS1 as seed ortholog is 100%.

Group of orthologs #676. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 D.pseudoobscura:530

F6TAK3              	100.00%		I5APJ0              	100.00%
Bootstrap support for F6TAK3 as seed ortholog is 100%.
Bootstrap support for I5APJ0 as seed ortholog is 100%.

Group of orthologs #677. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 D.pseudoobscura:399

H2XUU5              	100.00%		Q294I1              	100.00%
Bootstrap support for H2XUU5 as seed ortholog is 100%.
Bootstrap support for Q294I1 as seed ortholog is 100%.

Group of orthologs #678. Best score 530 bits
Score difference with first non-orthologous sequence - C.intestinalis:530 D.pseudoobscura:530

H2XVW1              	100.00%		Q29JH1              	100.00%
Bootstrap support for H2XVW1 as seed ortholog is 100%.
Bootstrap support for Q29JH1 as seed ortholog is 100%.

Group of orthologs #679. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 D.pseudoobscura:385

F6UJS3              	100.00%		Q29ND9              	100.00%
Bootstrap support for F6UJS3 as seed ortholog is 99%.
Bootstrap support for Q29ND9 as seed ortholog is 100%.

Group of orthologs #680. Best score 529 bits
Score difference with first non-orthologous sequence - C.intestinalis:529 D.pseudoobscura:105

H2XZ04              	100.00%		Q29PH5              	100.00%
Bootstrap support for H2XZ04 as seed ortholog is 100%.
Bootstrap support for Q29PH5 as seed ortholog is 97%.

Group of orthologs #681. Best score 528 bits
Score difference with first non-orthologous sequence - C.intestinalis:528 D.pseudoobscura:528

F6RFB0              	100.00%		Q29K84              	100.00%
Bootstrap support for F6RFB0 as seed ortholog is 100%.
Bootstrap support for Q29K84 as seed ortholog is 100%.

Group of orthologs #682. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:527 D.pseudoobscura:218

F7AHK4              	100.00%		Q29I07              	100.00%
Bootstrap support for F7AHK4 as seed ortholog is 100%.
Bootstrap support for Q29I07 as seed ortholog is 100%.

Group of orthologs #683. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 D.pseudoobscura:370

H2XJZ4              	100.00%		Q29JE3              	100.00%
Bootstrap support for H2XJZ4 as seed ortholog is 100%.
Bootstrap support for Q29JE3 as seed ortholog is 100%.

Group of orthologs #684. Best score 527 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 D.pseudoobscura:418

H2XVF8              	100.00%		Q29GZ7              	100.00%
Bootstrap support for H2XVF8 as seed ortholog is 100%.
Bootstrap support for Q29GZ7 as seed ortholog is 100%.

Group of orthologs #685. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 D.pseudoobscura:317

F6R4H2              	100.00%		Q290H4              	100.00%
Bootstrap support for F6R4H2 as seed ortholog is 100%.
Bootstrap support for Q290H4 as seed ortholog is 100%.

Group of orthologs #686. Best score 526 bits
Score difference with first non-orthologous sequence - C.intestinalis:526 D.pseudoobscura:526

F7AFD2              	100.00%		B5DWH8              	100.00%
Bootstrap support for F7AFD2 as seed ortholog is 100%.
Bootstrap support for B5DWH8 as seed ortholog is 100%.

Group of orthologs #687. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 D.pseudoobscura:74

F7A6E1              	100.00%		Q2M0P8              	100.00%
                    	       		Q2LZ14              	11.19%
                    	       		Q2M1B3              	5.23%
Bootstrap support for F7A6E1 as seed ortholog is 85%.
Bootstrap support for Q2M0P8 as seed ortholog is 91%.

Group of orthologs #688. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 D.pseudoobscura:525

H2Y2A4              	100.00%		Q29FR6              	100.00%
                    	       		Q29F24              	54.41%
Bootstrap support for H2Y2A4 as seed ortholog is 100%.
Bootstrap support for Q29FR6 as seed ortholog is 100%.

Group of orthologs #689. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 D.pseudoobscura:525

F6T2R5              	100.00%		Q29HV6              	100.00%
Bootstrap support for F6T2R5 as seed ortholog is 100%.
Bootstrap support for Q29HV6 as seed ortholog is 100%.

Group of orthologs #690. Best score 525 bits
Score difference with first non-orthologous sequence - C.intestinalis:525 D.pseudoobscura:466

H2Y107              	100.00%		Q297W8              	100.00%
Bootstrap support for H2Y107 as seed ortholog is 100%.
Bootstrap support for Q297W8 as seed ortholog is 100%.

Group of orthologs #691. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 D.pseudoobscura:524

F6X882              	100.00%		Q295X9              	100.00%
Bootstrap support for F6X882 as seed ortholog is 100%.
Bootstrap support for Q295X9 as seed ortholog is 100%.

Group of orthologs #692. Best score 524 bits
Score difference with first non-orthologous sequence - C.intestinalis:524 D.pseudoobscura:524

Q1RLD5              	100.00%		I7LZD2              	100.00%
Bootstrap support for Q1RLD5 as seed ortholog is 100%.
Bootstrap support for I7LZD2 as seed ortholog is 100%.

Group of orthologs #693. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 D.pseudoobscura:523

F6SVM8              	100.00%		Q29DL3              	100.00%
                    	       		B5DIP4              	39.90%
Bootstrap support for F6SVM8 as seed ortholog is 99%.
Bootstrap support for Q29DL3 as seed ortholog is 100%.

Group of orthologs #694. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 D.pseudoobscura:465

F6RZA6              	100.00%		Q2LYQ3              	100.00%
Bootstrap support for F6RZA6 as seed ortholog is 100%.
Bootstrap support for Q2LYQ3 as seed ortholog is 100%.

Group of orthologs #695. Best score 523 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 D.pseudoobscura:8

Q4H2T5              	100.00%		Q29HD9              	100.00%
Bootstrap support for Q4H2T5 as seed ortholog is 99%.
Bootstrap support for Q29HD9 as seed ortholog is 55%.
Alternative seed ortholog is B5DJI3 (8 bits away from this cluster)

Group of orthologs #696. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 D.pseudoobscura:522

F6WAD4              	100.00%		B5DKI8              	100.00%
                    	       		Q298B1              	79.72%
Bootstrap support for F6WAD4 as seed ortholog is 100%.
Bootstrap support for B5DKI8 as seed ortholog is 100%.

Group of orthologs #697. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 D.pseudoobscura:522

F6Q9C5              	100.00%		Q28XJ0              	100.00%
Bootstrap support for F6Q9C5 as seed ortholog is 100%.
Bootstrap support for Q28XJ0 as seed ortholog is 100%.

Group of orthologs #698. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 D.pseudoobscura:522

F7A9V2              	100.00%		Q28XT3              	100.00%
Bootstrap support for F7A9V2 as seed ortholog is 100%.
Bootstrap support for Q28XT3 as seed ortholog is 100%.

Group of orthologs #699. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 D.pseudoobscura:522

F6W0L1              	100.00%		Q29FT0              	100.00%
Bootstrap support for F6W0L1 as seed ortholog is 100%.
Bootstrap support for Q29FT0 as seed ortholog is 100%.

Group of orthologs #700. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 D.pseudoobscura:522

F6WLA0              	100.00%		Q29L17              	100.00%
Bootstrap support for F6WLA0 as seed ortholog is 100%.
Bootstrap support for Q29L17 as seed ortholog is 100%.

Group of orthologs #701. Best score 522 bits
Score difference with first non-orthologous sequence - C.intestinalis:522 D.pseudoobscura:522

F6X3S3              	100.00%		Q29NB3              	100.00%
Bootstrap support for F6X3S3 as seed ortholog is 100%.
Bootstrap support for Q29NB3 as seed ortholog is 100%.

Group of orthologs #702. Best score 521 bits
Score difference with first non-orthologous sequence - C.intestinalis:521 D.pseudoobscura:521

F6V4B3              	100.00%		Q295Y0              	100.00%
Bootstrap support for F6V4B3 as seed ortholog is 100%.
Bootstrap support for Q295Y0 as seed ortholog is 100%.

Group of orthologs #703. Best score 521 bits
Score difference with first non-orthologous sequence - C.intestinalis:521 D.pseudoobscura:521

F7AJ78              	100.00%		Q29F13              	100.00%
Bootstrap support for F7AJ78 as seed ortholog is 100%.
Bootstrap support for Q29F13 as seed ortholog is 100%.

Group of orthologs #704. Best score 521 bits
Score difference with first non-orthologous sequence - C.intestinalis:521 D.pseudoobscura:521

F7B690              	100.00%		Q2M015              	100.00%
Bootstrap support for F7B690 as seed ortholog is 100%.
Bootstrap support for Q2M015 as seed ortholog is 100%.

Group of orthologs #705. Best score 521 bits
Score difference with first non-orthologous sequence - C.intestinalis:521 D.pseudoobscura:521

Q1RLG4              	100.00%		Q29K05              	100.00%
Bootstrap support for Q1RLG4 as seed ortholog is 100%.
Bootstrap support for Q29K05 as seed ortholog is 100%.

Group of orthologs #706. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 D.pseudoobscura:248

F6RGG4              	100.00%		Q292P9              	100.00%
Bootstrap support for F6RGG4 as seed ortholog is 100%.
Bootstrap support for Q292P9 as seed ortholog is 100%.

Group of orthologs #707. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 D.pseudoobscura:357

F6VR09              	100.00%		Q292R6              	100.00%
Bootstrap support for F6VR09 as seed ortholog is 100%.
Bootstrap support for Q292R6 as seed ortholog is 100%.

Group of orthologs #708. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 D.pseudoobscura:520

F6Y4G4              	100.00%		Q29DY2              	100.00%
Bootstrap support for F6Y4G4 as seed ortholog is 100%.
Bootstrap support for Q29DY2 as seed ortholog is 100%.

Group of orthologs #709. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 D.pseudoobscura:520

H2XKN0              	100.00%		Q29AM2              	100.00%
Bootstrap support for H2XKN0 as seed ortholog is 100%.
Bootstrap support for Q29AM2 as seed ortholog is 100%.

Group of orthologs #710. Best score 520 bits
Score difference with first non-orthologous sequence - C.intestinalis:520 D.pseudoobscura:520

H2XUE6              	100.00%		Q297W6              	100.00%
Bootstrap support for H2XUE6 as seed ortholog is 100%.
Bootstrap support for Q297W6 as seed ortholog is 100%.

Group of orthologs #711. Best score 519 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 D.pseudoobscura:267

H2XQ18              	100.00%		B5DQZ5              	100.00%
Bootstrap support for H2XQ18 as seed ortholog is 81%.
Bootstrap support for B5DQZ5 as seed ortholog is 99%.

Group of orthologs #712. Best score 519 bits
Score difference with first non-orthologous sequence - C.intestinalis:519 D.pseudoobscura:133

F6UW56              	100.00%		Q29JG3              	100.00%
Bootstrap support for F6UW56 as seed ortholog is 100%.
Bootstrap support for Q29JG3 as seed ortholog is 99%.

Group of orthologs #713. Best score 519 bits
Score difference with first non-orthologous sequence - C.intestinalis:519 D.pseudoobscura:519

H2XP00              	100.00%		Q29C91              	100.00%
Bootstrap support for H2XP00 as seed ortholog is 100%.
Bootstrap support for Q29C91 as seed ortholog is 100%.

Group of orthologs #714. Best score 519 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 D.pseudoobscura:32

Q8WSS1              	100.00%		Q29F33              	100.00%
Bootstrap support for Q8WSS1 as seed ortholog is 99%.
Bootstrap support for Q29F33 as seed ortholog is 85%.

Group of orthologs #715. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 D.pseudoobscura:140

F6W3R8              	100.00%		Q29J63              	100.00%
F6VHP9              	64.62%		
Bootstrap support for F6W3R8 as seed ortholog is 100%.
Bootstrap support for Q29J63 as seed ortholog is 100%.

Group of orthologs #716. Best score 518 bits
Score difference with first non-orthologous sequence - C.intestinalis:518 D.pseudoobscura:518

H2XPV7              	100.00%		Q29EX3              	100.00%
Bootstrap support for H2XPV7 as seed ortholog is 100%.
Bootstrap support for Q29EX3 as seed ortholog is 100%.

Group of orthologs #717. Best score 517 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 D.pseudoobscura:433

F6UHI7              	100.00%		Q2M1B5              	100.00%
Bootstrap support for F6UHI7 as seed ortholog is 100%.
Bootstrap support for Q2M1B5 as seed ortholog is 100%.

Group of orthologs #718. Best score 516 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 D.pseudoobscura:437

F7BML6              	100.00%		Q29GW3              	100.00%
Bootstrap support for F7BML6 as seed ortholog is 100%.
Bootstrap support for Q29GW3 as seed ortholog is 100%.

Group of orthologs #719. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 D.pseudoobscura:515

F6YN13              	100.00%		Q28ZF2              	100.00%
Bootstrap support for F6YN13 as seed ortholog is 100%.
Bootstrap support for Q28ZF2 as seed ortholog is 100%.

Group of orthologs #720. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 D.pseudoobscura:515

H2Y1W2              	100.00%		B5DNZ0              	100.00%
Bootstrap support for H2Y1W2 as seed ortholog is 100%.
Bootstrap support for B5DNZ0 as seed ortholog is 100%.

Group of orthologs #721. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:515 D.pseudoobscura:515

F6YY15              	100.00%		Q29FQ4              	100.00%
Bootstrap support for F6YY15 as seed ortholog is 100%.
Bootstrap support for Q29FQ4 as seed ortholog is 100%.

Group of orthologs #722. Best score 515 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 D.pseudoobscura:189

F6YPX6              	100.00%		Q29IC1              	100.00%
Bootstrap support for F6YPX6 as seed ortholog is 100%.
Bootstrap support for Q29IC1 as seed ortholog is 99%.

Group of orthologs #723. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 D.pseudoobscura:227

F6SKI3              	100.00%		Q29JW2              	100.00%
Bootstrap support for F6SKI3 as seed ortholog is 100%.
Bootstrap support for Q29JW2 as seed ortholog is 100%.

Group of orthologs #724. Best score 514 bits
Score difference with first non-orthologous sequence - C.intestinalis:514 D.pseudoobscura:514

F6YWY7              	100.00%		Q29IW2              	100.00%
Bootstrap support for F6YWY7 as seed ortholog is 100%.
Bootstrap support for Q29IW2 as seed ortholog is 100%.

Group of orthologs #725. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:184

F6VJT7              	100.00%		B5DN49              	100.00%
F7BLJ0              	11.30%		Q29GY1              	8.05%
Bootstrap support for F6VJT7 as seed ortholog is 90%.
Bootstrap support for B5DN49 as seed ortholog is 100%.

Group of orthologs #726. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:513 D.pseudoobscura:513

F6X4W9              	100.00%		Q29F72              	100.00%
Bootstrap support for F6X4W9 as seed ortholog is 100%.
Bootstrap support for Q29F72 as seed ortholog is 100%.

Group of orthologs #727. Best score 513 bits
Score difference with first non-orthologous sequence - C.intestinalis:513 D.pseudoobscura:513

H2Y1U3              	100.00%		Q29BB7              	100.00%
Bootstrap support for H2Y1U3 as seed ortholog is 100%.
Bootstrap support for Q29BB7 as seed ortholog is 100%.

Group of orthologs #728. Best score 512 bits
Score difference with first non-orthologous sequence - C.intestinalis:512 D.pseudoobscura:512

F6U3Q1              	100.00%		Q298U4              	100.00%
Bootstrap support for F6U3Q1 as seed ortholog is 100%.
Bootstrap support for Q298U4 as seed ortholog is 100%.

Group of orthologs #729. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:511 D.pseudoobscura:511

F6SYF4              	100.00%		Q290S2              	100.00%
Bootstrap support for F6SYF4 as seed ortholog is 100%.
Bootstrap support for Q290S2 as seed ortholog is 100%.

Group of orthologs #730. Best score 511 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 D.pseudoobscura:384

F6WWK0              	100.00%		Q2LZI7              	100.00%
Bootstrap support for F6WWK0 as seed ortholog is 100%.
Bootstrap support for Q2LZI7 as seed ortholog is 100%.

Group of orthologs #731. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 D.pseudoobscura:510

F6SUU2              	100.00%		Q29AS9              	100.00%
Bootstrap support for F6SUU2 as seed ortholog is 85%.
Bootstrap support for Q29AS9 as seed ortholog is 100%.

Group of orthologs #732. Best score 510 bits
Score difference with first non-orthologous sequence - C.intestinalis:510 D.pseudoobscura:329

F6YH93              	100.00%		Q299R9              	100.00%
Bootstrap support for F6YH93 as seed ortholog is 100%.
Bootstrap support for Q299R9 as seed ortholog is 100%.

Group of orthologs #733. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 D.pseudoobscura:393

H2XPX0              	100.00%		Q29P29              	100.00%
                    	       		Q29CN1              	21.49%
Bootstrap support for H2XPX0 as seed ortholog is 100%.
Bootstrap support for Q29P29 as seed ortholog is 100%.

Group of orthologs #734. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 D.pseudoobscura:508

F6PRZ9              	100.00%		Q29FH3              	100.00%
Bootstrap support for F6PRZ9 as seed ortholog is 100%.
Bootstrap support for Q29FH3 as seed ortholog is 100%.

Group of orthologs #735. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 D.pseudoobscura:508

F6XQD4              	100.00%		Q28YP5              	100.00%
Bootstrap support for F6XQD4 as seed ortholog is 100%.
Bootstrap support for Q28YP5 as seed ortholog is 100%.

Group of orthologs #736. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 D.pseudoobscura:508

F7A5L4              	100.00%		Q296G8              	100.00%
Bootstrap support for F7A5L4 as seed ortholog is 100%.
Bootstrap support for Q296G8 as seed ortholog is 100%.

Group of orthologs #737. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:508 D.pseudoobscura:508

F6WRF3              	100.00%		Q29JL9              	100.00%
Bootstrap support for F6WRF3 as seed ortholog is 100%.
Bootstrap support for Q29JL9 as seed ortholog is 100%.

Group of orthologs #738. Best score 508 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 D.pseudoobscura:508

H2XMT7              	100.00%		Q29KR7              	100.00%
Bootstrap support for H2XMT7 as seed ortholog is 100%.
Bootstrap support for Q29KR7 as seed ortholog is 100%.

Group of orthologs #739. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 D.pseudoobscura:507

F6TAK8              	100.00%		Q28YK7              	100.00%
Bootstrap support for F6TAK8 as seed ortholog is 100%.
Bootstrap support for Q28YK7 as seed ortholog is 100%.

Group of orthologs #740. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 D.pseudoobscura:507

F6RXC5              	100.00%		Q297U8              	100.00%
Bootstrap support for F6RXC5 as seed ortholog is 100%.
Bootstrap support for Q297U8 as seed ortholog is 100%.

Group of orthologs #741. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 D.pseudoobscura:507

F6QXK6              	100.00%		Q29LX9              	100.00%
Bootstrap support for F6QXK6 as seed ortholog is 100%.
Bootstrap support for Q29LX9 as seed ortholog is 100%.

Group of orthologs #742. Best score 507 bits
Score difference with first non-orthologous sequence - C.intestinalis:507 D.pseudoobscura:339

F6XT75              	100.00%		Q29LN0              	100.00%
Bootstrap support for F6XT75 as seed ortholog is 100%.
Bootstrap support for Q29LN0 as seed ortholog is 100%.

Group of orthologs #743. Best score 506 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 D.pseudoobscura:123

F7BBP3              	100.00%		Q29N18              	100.00%
                    	       		Q29PC6              	24.62%
                    	       		Q29N17              	16.06%
                    	       		B5DHB9              	5.27%
Bootstrap support for F7BBP3 as seed ortholog is 75%.
Bootstrap support for Q29N18 as seed ortholog is 92%.

Group of orthologs #744. Best score 506 bits
Score difference with first non-orthologous sequence - C.intestinalis:506 D.pseudoobscura:506

F6R8L5              	100.00%		Q299C9              	100.00%
Bootstrap support for F6R8L5 as seed ortholog is 100%.
Bootstrap support for Q299C9 as seed ortholog is 100%.

Group of orthologs #745. Best score 506 bits
Score difference with first non-orthologous sequence - C.intestinalis:506 D.pseudoobscura:506

F7B2Q7              	100.00%		I5AMQ2              	100.00%
Bootstrap support for F7B2Q7 as seed ortholog is 100%.
Bootstrap support for I5AMQ2 as seed ortholog is 100%.

Group of orthologs #746. Best score 506 bits
Score difference with first non-orthologous sequence - C.intestinalis:506 D.pseudoobscura:506

F7AAA7              	100.00%		Q296G2              	100.00%
Bootstrap support for F7AAA7 as seed ortholog is 100%.
Bootstrap support for Q296G2 as seed ortholog is 100%.

Group of orthologs #747. Best score 505 bits
Score difference with first non-orthologous sequence - C.intestinalis:505 D.pseudoobscura:315

F7A5J2              	100.00%		B5DZN8              	100.00%
Bootstrap support for F7A5J2 as seed ortholog is 100%.
Bootstrap support for B5DZN8 as seed ortholog is 100%.

Group of orthologs #748. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 D.pseudoobscura:503

F6W833              	100.00%		Q29AL1              	100.00%
L7N0R6              	57.40%		
H2Y1N3              	31.56%		
F6XCJ9              	30.03%		
F6W7L1              	29.61%		
F6V5T4              	6.28%		
F6VSX4              	6.28%		
Bootstrap support for F6W833 as seed ortholog is 100%.
Bootstrap support for Q29AL1 as seed ortholog is 100%.

Group of orthologs #749. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 D.pseudoobscura:503

F6TZ29              	100.00%		Q28ZN4              	100.00%
Bootstrap support for F6TZ29 as seed ortholog is 100%.
Bootstrap support for Q28ZN4 as seed ortholog is 100%.

Group of orthologs #750. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 D.pseudoobscura:503

F6S9F0              	100.00%		Q298N6              	100.00%
Bootstrap support for F6S9F0 as seed ortholog is 100%.
Bootstrap support for Q298N6 as seed ortholog is 100%.

Group of orthologs #751. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 D.pseudoobscura:422

F6V934              	100.00%		Q299Q6              	100.00%
Bootstrap support for F6V934 as seed ortholog is 100%.
Bootstrap support for Q299Q6 as seed ortholog is 100%.

Group of orthologs #752. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 D.pseudoobscura:503

Q1RLA7              	100.00%		B5DVQ4              	100.00%
Bootstrap support for Q1RLA7 as seed ortholog is 100%.
Bootstrap support for B5DVQ4 as seed ortholog is 100%.

Group of orthologs #753. Best score 503 bits
Score difference with first non-orthologous sequence - C.intestinalis:503 D.pseudoobscura:503

H2XX22              	100.00%		Q29PF7              	100.00%
Bootstrap support for H2XX22 as seed ortholog is 100%.
Bootstrap support for Q29PF7 as seed ortholog is 100%.

Group of orthologs #754. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 D.pseudoobscura:502

F6QX56              	100.00%		Q29B31              	100.00%
Bootstrap support for F6QX56 as seed ortholog is 100%.
Bootstrap support for Q29B31 as seed ortholog is 100%.

Group of orthologs #755. Best score 502 bits
Score difference with first non-orthologous sequence - C.intestinalis:502 D.pseudoobscura:502

F6YU96              	100.00%		Q29H78              	100.00%
Bootstrap support for F6YU96 as seed ortholog is 100%.
Bootstrap support for Q29H78 as seed ortholog is 100%.

Group of orthologs #756. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 D.pseudoobscura:417

F6RBW8              	100.00%		Q2M1A2              	100.00%
Bootstrap support for F6RBW8 as seed ortholog is 100%.
Bootstrap support for Q2M1A2 as seed ortholog is 100%.

Group of orthologs #757. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 D.pseudoobscura:350

F7AYN4              	100.00%		Q29D63              	100.00%
Bootstrap support for F7AYN4 as seed ortholog is 100%.
Bootstrap support for Q29D63 as seed ortholog is 100%.

Group of orthologs #758. Best score 501 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 D.pseudoobscura:501

H2XQR7              	100.00%		Q29FJ1              	100.00%
Bootstrap support for H2XQR7 as seed ortholog is 100%.
Bootstrap support for Q29FJ1 as seed ortholog is 100%.

Group of orthologs #759. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 D.pseudoobscura:309

F6R3K6              	100.00%		B5E0E1              	100.00%
Bootstrap support for F6R3K6 as seed ortholog is 100%.
Bootstrap support for B5E0E1 as seed ortholog is 100%.

Group of orthologs #760. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:500 D.pseudoobscura:500

F6Q2Q3              	100.00%		Q299I6              	100.00%
Bootstrap support for F6Q2Q3 as seed ortholog is 100%.
Bootstrap support for Q299I6 as seed ortholog is 100%.

Group of orthologs #761. Best score 500 bits
Score difference with first non-orthologous sequence - C.intestinalis:452 D.pseudoobscura:419

F6QDG1              	100.00%		Q29NY8              	100.00%
Bootstrap support for F6QDG1 as seed ortholog is 100%.
Bootstrap support for Q29NY8 as seed ortholog is 100%.

Group of orthologs #762. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 D.pseudoobscura:499

H2Y100              	100.00%		B5DPE8              	100.00%
Bootstrap support for H2Y100 as seed ortholog is 100%.
Bootstrap support for B5DPE8 as seed ortholog is 100%.

Group of orthologs #763. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 D.pseudoobscura:71

H2XXZ7              	100.00%		O44104              	100.00%
Bootstrap support for H2XXZ7 as seed ortholog is 100%.
Bootstrap support for O44104 as seed ortholog is 99%.

Group of orthologs #764. Best score 499 bits
Score difference with first non-orthologous sequence - C.intestinalis:499 D.pseudoobscura:499

F6XWY9              	100.00%		Q2M0G0              	100.00%
Bootstrap support for F6XWY9 as seed ortholog is 100%.
Bootstrap support for Q2M0G0 as seed ortholog is 100%.

Group of orthologs #765. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 D.pseudoobscura:180

F6WXA3              	100.00%		Q296G7              	100.00%
F6WBI7              	52.09%		
Bootstrap support for F6WXA3 as seed ortholog is 100%.
Bootstrap support for Q296G7 as seed ortholog is 100%.

Group of orthologs #766. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 D.pseudoobscura:332

F6UIG7              	100.00%		Q29B63              	100.00%
Bootstrap support for F6UIG7 as seed ortholog is 100%.
Bootstrap support for Q29B63 as seed ortholog is 100%.

Group of orthologs #767. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:498 D.pseudoobscura:498

F6S8S3              	100.00%		Q2M0S3              	100.00%
Bootstrap support for F6S8S3 as seed ortholog is 100%.
Bootstrap support for Q2M0S3 as seed ortholog is 100%.

Group of orthologs #768. Best score 498 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 D.pseudoobscura:65

H2Y1L4              	100.00%		Q29HX8              	100.00%
Bootstrap support for H2Y1L4 as seed ortholog is 99%.
Bootstrap support for Q29HX8 as seed ortholog is 85%.

Group of orthologs #769. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 D.pseudoobscura:497

F6PLF9              	100.00%		B5DPY6              	100.00%
F7A4H3              	27.20%		
F6PZN0              	5.80%		
Bootstrap support for F6PLF9 as seed ortholog is 100%.
Bootstrap support for B5DPY6 as seed ortholog is 100%.

Group of orthologs #770. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 D.pseudoobscura:497

F6UH30              	100.00%		B5DSC2              	100.00%
Bootstrap support for F6UH30 as seed ortholog is 100%.
Bootstrap support for B5DSC2 as seed ortholog is 100%.

Group of orthologs #771. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 D.pseudoobscura:497

A1XDA5              	100.00%		Q29KP1              	100.00%
Bootstrap support for A1XDA5 as seed ortholog is 100%.
Bootstrap support for Q29KP1 as seed ortholog is 100%.

Group of orthologs #772. Best score 497 bits
Score difference with first non-orthologous sequence - C.intestinalis:497 D.pseudoobscura:101

F7AVN5              	100.00%		Q29E28              	100.00%
Bootstrap support for F7AVN5 as seed ortholog is 100%.
Bootstrap support for Q29E28 as seed ortholog is 99%.

Group of orthologs #773. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 D.pseudoobscura:241

F7ABR6              	100.00%		Q28XF7              	100.00%
                    	       		Q28WL9              	17.94%
                    	       		Q29JH2              	16.76%
                    	       		Q28WM0              	15.12%
Bootstrap support for F7ABR6 as seed ortholog is 99%.
Bootstrap support for Q28XF7 as seed ortholog is 100%.

Group of orthologs #774. Best score 496 bits
Score difference with first non-orthologous sequence - C.intestinalis:496 D.pseudoobscura:496

H2XVK2              	100.00%		Q29KV1              	100.00%
H2XQD5              	53.86%		
Bootstrap support for H2XVK2 as seed ortholog is 100%.
Bootstrap support for Q29KV1 as seed ortholog is 100%.

Group of orthologs #775. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 D.pseudoobscura:283

F6W6V6              	100.00%		B5DJZ9              	100.00%
                    	       		B5DV02              	76.28%
                    	       		B5DU37              	71.95%
                    	       		Q29CJ8              	19.27%
Bootstrap support for F6W6V6 as seed ortholog is 98%.
Bootstrap support for B5DJZ9 as seed ortholog is 100%.

Group of orthologs #776. Best score 495 bits
Score difference with first non-orthologous sequence - C.intestinalis:495 D.pseudoobscura:495

H2XUW1              	100.00%		B5E0G9              	100.00%
Bootstrap support for H2XUW1 as seed ortholog is 100%.
Bootstrap support for B5E0G9 as seed ortholog is 100%.

Group of orthologs #777. Best score 494 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 D.pseudoobscura:434

F6QRJ2              	100.00%		Q2LZS8              	100.00%
                    	       		Q28ZA7              	19.57%
Bootstrap support for F6QRJ2 as seed ortholog is 100%.
Bootstrap support for Q2LZS8 as seed ortholog is 100%.

Group of orthologs #778. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 D.pseudoobscura:493

F6YAH3              	100.00%		B5DQG7              	100.00%
Bootstrap support for F6YAH3 as seed ortholog is 100%.
Bootstrap support for B5DQG7 as seed ortholog is 100%.

Group of orthologs #779. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 D.pseudoobscura:369

F6SIX8              	100.00%		Q28YP6              	100.00%
Bootstrap support for F6SIX8 as seed ortholog is 100%.
Bootstrap support for Q28YP6 as seed ortholog is 100%.

Group of orthologs #780. Best score 493 bits
Score difference with first non-orthologous sequence - C.intestinalis:493 D.pseudoobscura:493

F6YQ60              	100.00%		Q29L99              	100.00%
Bootstrap support for F6YQ60 as seed ortholog is 100%.
Bootstrap support for Q29L99 as seed ortholog is 100%.

Group of orthologs #781. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 D.pseudoobscura:492

F6QI83              	100.00%		B5DUR8              	100.00%
Bootstrap support for F6QI83 as seed ortholog is 100%.
Bootstrap support for B5DUR8 as seed ortholog is 100%.

Group of orthologs #782. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 D.pseudoobscura:274

F6TEA0              	100.00%		B5DXB3              	100.00%
Bootstrap support for F6TEA0 as seed ortholog is 100%.
Bootstrap support for B5DXB3 as seed ortholog is 100%.

Group of orthologs #783. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 D.pseudoobscura:492

F6QLM7              	100.00%		Q296C9              	100.00%
Bootstrap support for F6QLM7 as seed ortholog is 100%.
Bootstrap support for Q296C9 as seed ortholog is 100%.

Group of orthologs #784. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 D.pseudoobscura:492

F6W141              	100.00%		Q298L5              	100.00%
Bootstrap support for F6W141 as seed ortholog is 100%.
Bootstrap support for Q298L5 as seed ortholog is 100%.

Group of orthologs #785. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 D.pseudoobscura:492

F7BCV4              	100.00%		Q295J7              	100.00%
Bootstrap support for F7BCV4 as seed ortholog is 100%.
Bootstrap support for Q295J7 as seed ortholog is 100%.

Group of orthologs #786. Best score 492 bits
Score difference with first non-orthologous sequence - C.intestinalis:492 D.pseudoobscura:492

Q1RL44              	100.00%		Q29AA8              	100.00%
Bootstrap support for Q1RL44 as seed ortholog is 100%.
Bootstrap support for Q29AA8 as seed ortholog is 100%.

Group of orthologs #787. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 D.pseudoobscura:491

F6XIK7              	100.00%		B5DLU7              	100.00%
Bootstrap support for F6XIK7 as seed ortholog is 100%.
Bootstrap support for B5DLU7 as seed ortholog is 100%.

Group of orthologs #788. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 D.pseudoobscura:491

F6X9E5              	100.00%		B5DXU8              	100.00%
Bootstrap support for F6X9E5 as seed ortholog is 100%.
Bootstrap support for B5DXU8 as seed ortholog is 100%.

Group of orthologs #789. Best score 491 bits
Score difference with first non-orthologous sequence - C.intestinalis:491 D.pseudoobscura:491

F6YLZ5              	100.00%		Q29AL6              	100.00%
Bootstrap support for F6YLZ5 as seed ortholog is 100%.
Bootstrap support for Q29AL6 as seed ortholog is 100%.

Group of orthologs #790. Best score 490 bits
Score difference with first non-orthologous sequence - C.intestinalis:490 D.pseudoobscura:285

F7AEY7              	100.00%		Q29DK4              	100.00%
                    	       		B5DYB0              	12.32%
Bootstrap support for F7AEY7 as seed ortholog is 100%.
Bootstrap support for Q29DK4 as seed ortholog is 100%.

Group of orthologs #791. Best score 490 bits
Score difference with first non-orthologous sequence - C.intestinalis:490 D.pseudoobscura:190

F6S4Q0              	100.00%		Q29G46              	100.00%
Bootstrap support for F6S4Q0 as seed ortholog is 100%.
Bootstrap support for Q29G46 as seed ortholog is 100%.

Group of orthologs #792. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 D.pseudoobscura:388

F6S3E0              	100.00%		Q298E8              	100.00%
Bootstrap support for F6S3E0 as seed ortholog is 100%.
Bootstrap support for Q298E8 as seed ortholog is 100%.

Group of orthologs #793. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 D.pseudoobscura:488

F6VJS2              	100.00%		Q29M31              	100.00%
Bootstrap support for F6VJS2 as seed ortholog is 100%.
Bootstrap support for Q29M31 as seed ortholog is 100%.

Group of orthologs #794. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 D.pseudoobscura:488

F6WYU9              	100.00%		Q29MC1              	100.00%
Bootstrap support for F6WYU9 as seed ortholog is 100%.
Bootstrap support for Q29MC1 as seed ortholog is 100%.

Group of orthologs #795. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 D.pseudoobscura:296

F7BDH1              	100.00%		Q29BG1              	100.00%
Bootstrap support for F7BDH1 as seed ortholog is 100%.
Bootstrap support for Q29BG1 as seed ortholog is 100%.

Group of orthologs #796. Best score 488 bits
Score difference with first non-orthologous sequence - C.intestinalis:488 D.pseudoobscura:488

H2XTT5              	100.00%		Q29GC1              	100.00%
Bootstrap support for H2XTT5 as seed ortholog is 100%.
Bootstrap support for Q29GC1 as seed ortholog is 100%.

Group of orthologs #797. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 D.pseudoobscura:390

F6YP78              	100.00%		Q29H89              	100.00%
F6WN12              	53.64%		
Bootstrap support for F6YP78 as seed ortholog is 79%.
Bootstrap support for Q29H89 as seed ortholog is 100%.

Group of orthologs #798. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 D.pseudoobscura:393

F6YJ55              	100.00%		Q29NJ9              	100.00%
F6YJ69              	45.62%		
Bootstrap support for F6YJ55 as seed ortholog is 99%.
Bootstrap support for Q29NJ9 as seed ortholog is 100%.

Group of orthologs #799. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 D.pseudoobscura:98

H2XK85              	100.00%		Q29IJ2              	100.00%
H2XLI5              	53.25%		
Bootstrap support for H2XK85 as seed ortholog is 100%.
Bootstrap support for Q29IJ2 as seed ortholog is 99%.

Group of orthologs #800. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 D.pseudoobscura:487

F6Q2H6              	100.00%		B5DRL9              	100.00%
Bootstrap support for F6Q2H6 as seed ortholog is 100%.
Bootstrap support for B5DRL9 as seed ortholog is 100%.

Group of orthologs #801. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 D.pseudoobscura:487

F6SID0              	100.00%		Q29EX2              	100.00%
Bootstrap support for F6SID0 as seed ortholog is 100%.
Bootstrap support for Q29EX2 as seed ortholog is 100%.

Group of orthologs #802. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 D.pseudoobscura:376

F6SDE2              	100.00%		Q29HY5              	100.00%
Bootstrap support for F6SDE2 as seed ortholog is 100%.
Bootstrap support for Q29HY5 as seed ortholog is 100%.

Group of orthologs #803. Best score 487 bits
Score difference with first non-orthologous sequence - C.intestinalis:487 D.pseudoobscura:252

F7AJP1              	100.00%		B5E189              	100.00%
Bootstrap support for F7AJP1 as seed ortholog is 100%.
Bootstrap support for B5E189 as seed ortholog is 100%.

Group of orthologs #804. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 D.pseudoobscura:486

F6ZP25              	100.00%		Q2M0L7              	100.00%
Bootstrap support for F6ZP25 as seed ortholog is 100%.
Bootstrap support for Q2M0L7 as seed ortholog is 100%.

Group of orthologs #805. Best score 486 bits
Score difference with first non-orthologous sequence - C.intestinalis:486 D.pseudoobscura:384

F6ZP71              	100.00%		Q2M0N1              	100.00%
Bootstrap support for F6ZP71 as seed ortholog is 100%.
Bootstrap support for Q2M0N1 as seed ortholog is 100%.

Group of orthologs #806. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 D.pseudoobscura:89

F6Q874              	100.00%		Q299U1              	100.00%
Bootstrap support for F6Q874 as seed ortholog is 100%.
Bootstrap support for Q299U1 as seed ortholog is 85%.

Group of orthologs #807. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 D.pseudoobscura:485

F6SDM6              	100.00%		Q29BM9              	100.00%
Bootstrap support for F6SDM6 as seed ortholog is 100%.
Bootstrap support for Q29BM9 as seed ortholog is 100%.

Group of orthologs #808. Best score 485 bits
Score difference with first non-orthologous sequence - C.intestinalis:485 D.pseudoobscura:485

H2XZG0              	100.00%		B5DKH5              	100.00%
Bootstrap support for H2XZG0 as seed ortholog is 100%.
Bootstrap support for B5DKH5 as seed ortholog is 100%.

Group of orthologs #809. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 D.pseudoobscura:383

H2Y1T7              	100.00%		B5DQR8              	100.00%
                    	       		Q29AD1              	7.58%
Bootstrap support for H2Y1T7 as seed ortholog is 99%.
Bootstrap support for B5DQR8 as seed ortholog is 100%.

Group of orthologs #810. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 D.pseudoobscura:484

F7BK08              	100.00%		Q29MQ2              	100.00%
                    	       		Q29E78              	47.05%
Bootstrap support for F7BK08 as seed ortholog is 100%.
Bootstrap support for Q29MQ2 as seed ortholog is 100%.

Group of orthologs #811. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 D.pseudoobscura:278

F6UF11              	100.00%		I5ANM2              	100.00%
Bootstrap support for F6UF11 as seed ortholog is 100%.
Bootstrap support for I5ANM2 as seed ortholog is 100%.

Group of orthologs #812. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 D.pseudoobscura:484

F6PKW3              	100.00%		Q29BL5              	100.00%
Bootstrap support for F6PKW3 as seed ortholog is 100%.
Bootstrap support for Q29BL5 as seed ortholog is 100%.

Group of orthologs #813. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 D.pseudoobscura:266

F6Z781              	100.00%		B5DWN4              	100.00%
Bootstrap support for F6Z781 as seed ortholog is 100%.
Bootstrap support for B5DWN4 as seed ortholog is 100%.

Group of orthologs #814. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 D.pseudoobscura:484

F6WUP4              	100.00%		Q292S0              	100.00%
Bootstrap support for F6WUP4 as seed ortholog is 100%.
Bootstrap support for Q292S0 as seed ortholog is 100%.

Group of orthologs #815. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 D.pseudoobscura:484

F6ZTE7              	100.00%		Q2LZ45              	100.00%
Bootstrap support for F6ZTE7 as seed ortholog is 100%.
Bootstrap support for Q2LZ45 as seed ortholog is 100%.

Group of orthologs #816. Best score 484 bits
Score difference with first non-orthologous sequence - C.intestinalis:484 D.pseudoobscura:484

Q5QQ55              	100.00%		Q5QQ53              	100.00%
Bootstrap support for Q5QQ55 as seed ortholog is 100%.
Bootstrap support for Q5QQ53 as seed ortholog is 100%.

Group of orthologs #817. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 D.pseudoobscura:483

F6VBD0              	100.00%		Q29D34              	100.00%
H2XWC3              	10.90%		
F6X313              	5.49%		
Bootstrap support for F6VBD0 as seed ortholog is 100%.
Bootstrap support for Q29D34 as seed ortholog is 100%.

Group of orthologs #818. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 D.pseudoobscura:375

F6PHN1              	100.00%		Q296F0              	100.00%
Bootstrap support for F6PHN1 as seed ortholog is 100%.
Bootstrap support for Q296F0 as seed ortholog is 100%.

Group of orthologs #819. Best score 483 bits
Score difference with first non-orthologous sequence - C.intestinalis:483 D.pseudoobscura:483

F7BQ94              	100.00%		Q2LZW6              	100.00%
Bootstrap support for F7BQ94 as seed ortholog is 100%.
Bootstrap support for Q2LZW6 as seed ortholog is 100%.

Group of orthologs #820. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 D.pseudoobscura:482

F6TD07              	100.00%		B5DP22              	100.00%
Bootstrap support for F6TD07 as seed ortholog is 100%.
Bootstrap support for B5DP22 as seed ortholog is 100%.

Group of orthologs #821. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 D.pseudoobscura:482

F6PHE6              	100.00%		B5DXY5              	100.00%
Bootstrap support for F6PHE6 as seed ortholog is 100%.
Bootstrap support for B5DXY5 as seed ortholog is 100%.

Group of orthologs #822. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 D.pseudoobscura:99

F6SUS9              	100.00%		Q29IW3              	100.00%
Bootstrap support for F6SUS9 as seed ortholog is 100%.
Bootstrap support for Q29IW3 as seed ortholog is 99%.

Group of orthologs #823. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 D.pseudoobscura:366

F6W841              	100.00%		Q29IQ6              	100.00%
Bootstrap support for F6W841 as seed ortholog is 100%.
Bootstrap support for Q29IQ6 as seed ortholog is 100%.

Group of orthologs #824. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 D.pseudoobscura:358

F7B221              	100.00%		Q298R5              	100.00%
Bootstrap support for F7B221 as seed ortholog is 100%.
Bootstrap support for Q298R5 as seed ortholog is 100%.

Group of orthologs #825. Best score 482 bits
Score difference with first non-orthologous sequence - C.intestinalis:482 D.pseudoobscura:482

F6ZHS2              	100.00%		Q29MI5              	100.00%
Bootstrap support for F6ZHS2 as seed ortholog is 100%.
Bootstrap support for Q29MI5 as seed ortholog is 100%.

Group of orthologs #826. Best score 481 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 D.pseudoobscura:202

F6YS67              	100.00%		Q29P74              	100.00%
Bootstrap support for F6YS67 as seed ortholog is 100%.
Bootstrap support for Q29P74 as seed ortholog is 100%.

Group of orthologs #827. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 D.pseudoobscura:480

F6WRC9              	100.00%		B5E1G9              	100.00%
                    	       		B5DZV0              	26.42%
Bootstrap support for F6WRC9 as seed ortholog is 100%.
Bootstrap support for B5E1G9 as seed ortholog is 100%.

Group of orthologs #828. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 D.pseudoobscura:480

F7A7F8              	100.00%		Q292U2              	100.00%
                    	       		Q292U5              	6.14%
Bootstrap support for F7A7F8 as seed ortholog is 100%.
Bootstrap support for Q292U2 as seed ortholog is 100%.

Group of orthologs #829. Best score 480 bits
Score difference with first non-orthologous sequence - C.intestinalis:480 D.pseudoobscura:480

F6QR08              	100.00%		Q29MT3              	100.00%
Bootstrap support for F6QR08 as seed ortholog is 100%.
Bootstrap support for Q29MT3 as seed ortholog is 100%.

Group of orthologs #830. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 D.pseudoobscura:99

F6R6X6              	100.00%		Q29KZ2              	100.00%
Bootstrap support for F6R6X6 as seed ortholog is 100%.
Bootstrap support for Q29KZ2 as seed ortholog is 98%.

Group of orthologs #831. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 D.pseudoobscura:479

F6XUA1              	100.00%		Q29G99              	100.00%
Bootstrap support for F6XUA1 as seed ortholog is 100%.
Bootstrap support for Q29G99 as seed ortholog is 100%.

Group of orthologs #832. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 D.pseudoobscura:479

F6ZQ65              	100.00%		Q29F43              	100.00%
Bootstrap support for F6ZQ65 as seed ortholog is 100%.
Bootstrap support for Q29F43 as seed ortholog is 100%.

Group of orthologs #833. Best score 479 bits
Score difference with first non-orthologous sequence - C.intestinalis:479 D.pseudoobscura:479

H2XW76              	100.00%		Q29DF6              	100.00%
Bootstrap support for H2XW76 as seed ortholog is 100%.
Bootstrap support for Q29DF6 as seed ortholog is 100%.

Group of orthologs #834. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 D.pseudoobscura:478

H2XJU0              	100.00%		B5DPG9              	100.00%
                    	       		B5DVD6              	47.97%
                    	       		B5DKW1              	17.65%
Bootstrap support for H2XJU0 as seed ortholog is 100%.
Bootstrap support for B5DPG9 as seed ortholog is 100%.

Group of orthologs #835. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 D.pseudoobscura:478

F6SWH7              	100.00%		B5DK37              	100.00%
Bootstrap support for F6SWH7 as seed ortholog is 100%.
Bootstrap support for B5DK37 as seed ortholog is 100%.

Group of orthologs #836. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 D.pseudoobscura:478

H2XRH2              	100.00%		Q29G39              	100.00%
Bootstrap support for H2XRH2 as seed ortholog is 100%.
Bootstrap support for Q29G39 as seed ortholog is 100%.

Group of orthologs #837. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 D.pseudoobscura:351

H2XZZ6              	100.00%		Q29B91              	100.00%
Bootstrap support for H2XZZ6 as seed ortholog is 100%.
Bootstrap support for Q29B91 as seed ortholog is 100%.

Group of orthologs #838. Best score 478 bits
Score difference with first non-orthologous sequence - C.intestinalis:478 D.pseudoobscura:411

H2Y164              	100.00%		Q29FT4              	100.00%
Bootstrap support for H2Y164 as seed ortholog is 100%.
Bootstrap support for Q29FT4 as seed ortholog is 100%.

Group of orthologs #839. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:477 D.pseudoobscura:80

F6Z5P6              	100.00%		Q29CL0              	100.00%
F6ZTZ7              	59.63%		Q290I6              	10.56%
                    	       		Q292Z5              	8.01%
Bootstrap support for F6Z5P6 as seed ortholog is 100%.
Bootstrap support for Q29CL0 as seed ortholog is 97%.

Group of orthologs #840. Best score 477 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 D.pseudoobscura:477

F6XEV8              	100.00%		B5DN06              	100.00%
Bootstrap support for F6XEV8 as seed ortholog is 100%.
Bootstrap support for B5DN06 as seed ortholog is 100%.

Group of orthologs #841. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 D.pseudoobscura:476

F6U7X2              	100.00%		B5E1F8              	100.00%
                    	       		Q28ZQ9              	17.42%
Bootstrap support for F6U7X2 as seed ortholog is 100%.
Bootstrap support for B5E1F8 as seed ortholog is 100%.

Group of orthologs #842. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 D.pseudoobscura:476

F6ZUV7              	100.00%		Q29H55              	100.00%
                    	       		Q29H56              	48.55%
Bootstrap support for F6ZUV7 as seed ortholog is 100%.
Bootstrap support for Q29H55 as seed ortholog is 100%.

Group of orthologs #843. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 D.pseudoobscura:107

F7B6X8              	100.00%		Q29E48              	100.00%
                    	       		Q29MC2              	14.82%
Bootstrap support for F7B6X8 as seed ortholog is 99%.
Bootstrap support for Q29E48 as seed ortholog is 97%.

Group of orthologs #844. Best score 476 bits
Score difference with first non-orthologous sequence - C.intestinalis:476 D.pseudoobscura:476

F6W9I8              	100.00%		Q29J05              	100.00%
Bootstrap support for F6W9I8 as seed ortholog is 100%.
Bootstrap support for Q29J05 as seed ortholog is 100%.

Group of orthologs #845. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 D.pseudoobscura:475

F6THM1              	100.00%		Q293F7              	100.00%
Bootstrap support for F6THM1 as seed ortholog is 100%.
Bootstrap support for Q293F7 as seed ortholog is 100%.

Group of orthologs #846. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 D.pseudoobscura:475

F6WUM1              	100.00%		Q29B16              	100.00%
Bootstrap support for F6WUM1 as seed ortholog is 100%.
Bootstrap support for Q29B16 as seed ortholog is 100%.

Group of orthologs #847. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 D.pseudoobscura:323

F6ZUU0              	100.00%		Q298Q2              	100.00%
Bootstrap support for F6ZUU0 as seed ortholog is 100%.
Bootstrap support for Q298Q2 as seed ortholog is 100%.

Group of orthologs #848. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 D.pseudoobscura:475

F6XKA2              	100.00%		Q29I46              	100.00%
Bootstrap support for F6XKA2 as seed ortholog is 100%.
Bootstrap support for Q29I46 as seed ortholog is 100%.

Group of orthologs #849. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 D.pseudoobscura:475

F7BBJ9              	100.00%		Q29AC1              	100.00%
Bootstrap support for F7BBJ9 as seed ortholog is 100%.
Bootstrap support for Q29AC1 as seed ortholog is 100%.

Group of orthologs #850. Best score 475 bits
Score difference with first non-orthologous sequence - C.intestinalis:475 D.pseudoobscura:161

F6XAQ8              	100.00%		Q29NN5              	100.00%
Bootstrap support for F6XAQ8 as seed ortholog is 100%.
Bootstrap support for Q29NN5 as seed ortholog is 99%.

Group of orthologs #851. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 D.pseudoobscura:474

F6VKA0              	100.00%		Q28YB8              	100.00%
                    	       		B5DHH8              	75.94%
                    	       		B5DHH6              	75.47%
Bootstrap support for F6VKA0 as seed ortholog is 100%.
Bootstrap support for Q28YB8 as seed ortholog is 100%.

Group of orthologs #852. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 D.pseudoobscura:147

F6R554              	100.00%		Q29G11              	100.00%
F6XCE2              	12.75%		
Bootstrap support for F6R554 as seed ortholog is 99%.
Bootstrap support for Q29G11 as seed ortholog is 99%.

Group of orthologs #853. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 D.pseudoobscura:177

F7B8H6              	100.00%		B5DXX5              	100.00%
F6TEA7              	48.58%		
Bootstrap support for F7B8H6 as seed ortholog is 100%.
Bootstrap support for B5DXX5 as seed ortholog is 99%.

Group of orthologs #854. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 D.pseudoobscura:474

F6YPY1              	100.00%		Q291V0              	100.00%
Bootstrap support for F6YPY1 as seed ortholog is 100%.
Bootstrap support for Q291V0 as seed ortholog is 100%.

Group of orthologs #855. Best score 474 bits
Score difference with first non-orthologous sequence - C.intestinalis:474 D.pseudoobscura:474

H2XQE4              	100.00%		Q29EJ7              	100.00%
Bootstrap support for H2XQE4 as seed ortholog is 100%.
Bootstrap support for Q29EJ7 as seed ortholog is 100%.

Group of orthologs #856. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 D.pseudoobscura:406

F7B1X4              	100.00%		Q29NM6              	100.00%
                    	       		B5DUF5              	50.58%
                    	       		B5DNN5              	50.41%
Bootstrap support for F7B1X4 as seed ortholog is 100%.
Bootstrap support for Q29NM6 as seed ortholog is 100%.

Group of orthologs #857. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 D.pseudoobscura:364

F6W1F7              	100.00%		Q290P0              	100.00%
Bootstrap support for F6W1F7 as seed ortholog is 100%.
Bootstrap support for Q290P0 as seed ortholog is 100%.

Group of orthologs #858. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 D.pseudoobscura:428

F6YBW7              	100.00%		Q292B2              	100.00%
Bootstrap support for F6YBW7 as seed ortholog is 100%.
Bootstrap support for Q292B2 as seed ortholog is 100%.

Group of orthologs #859. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 D.pseudoobscura:473

F6RKR7              	100.00%		Q29LU0              	100.00%
Bootstrap support for F6RKR7 as seed ortholog is 100%.
Bootstrap support for Q29LU0 as seed ortholog is 100%.

Group of orthologs #860. Best score 473 bits
Score difference with first non-orthologous sequence - C.intestinalis:473 D.pseudoobscura:473

F6ZM08              	100.00%		Q29EP3              	100.00%
Bootstrap support for F6ZM08 as seed ortholog is 100%.
Bootstrap support for Q29EP3 as seed ortholog is 100%.

Group of orthologs #861. Best score 472 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 D.pseudoobscura:311

H2XKP7              	100.00%		B5DWZ6              	100.00%
Bootstrap support for H2XKP7 as seed ortholog is 99%.
Bootstrap support for B5DWZ6 as seed ortholog is 100%.

Group of orthologs #862. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 D.pseudoobscura:471

F6PWP3              	100.00%		B5DIE4              	100.00%
Bootstrap support for F6PWP3 as seed ortholog is 100%.
Bootstrap support for B5DIE4 as seed ortholog is 100%.

Group of orthologs #863. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 D.pseudoobscura:471

F6TMN3              	100.00%		Q290Y3              	100.00%
Bootstrap support for F6TMN3 as seed ortholog is 100%.
Bootstrap support for Q290Y3 as seed ortholog is 100%.

Group of orthologs #864. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:471 D.pseudoobscura:471

F7A4H8              	100.00%		B5DYI6              	100.00%
Bootstrap support for F7A4H8 as seed ortholog is 100%.
Bootstrap support for B5DYI6 as seed ortholog is 100%.

Group of orthologs #865. Best score 471 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 D.pseudoobscura:301

F6ZIP1              	100.00%		Q29D93              	100.00%
Bootstrap support for F6ZIP1 as seed ortholog is 100%.
Bootstrap support for Q29D93 as seed ortholog is 100%.

Group of orthologs #866. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:373

H2XK79              	100.00%		Q29H33              	100.00%
H2XS68              	68.94%		Q29H34              	11.11%
Bootstrap support for H2XK79 as seed ortholog is 100%.
Bootstrap support for Q29H33 as seed ortholog is 100%.

Group of orthologs #867. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 D.pseudoobscura:470

F6UJI9              	100.00%		Q29N01              	100.00%
Bootstrap support for F6UJI9 as seed ortholog is 100%.
Bootstrap support for Q29N01 as seed ortholog is 100%.

Group of orthologs #868. Best score 470 bits
Score difference with first non-orthologous sequence - C.intestinalis:470 D.pseudoobscura:341

F7A8T7              	100.00%		Q29LW2              	100.00%
Bootstrap support for F7A8T7 as seed ortholog is 100%.
Bootstrap support for Q29LW2 as seed ortholog is 100%.

Group of orthologs #869. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 D.pseudoobscura:469

F6TGV4              	100.00%		Q293C2              	100.00%
Bootstrap support for F6TGV4 as seed ortholog is 100%.
Bootstrap support for Q293C2 as seed ortholog is 100%.

Group of orthologs #870. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 D.pseudoobscura:378

F6SK29              	100.00%		Q29MB0              	100.00%
Bootstrap support for F6SK29 as seed ortholog is 100%.
Bootstrap support for Q29MB0 as seed ortholog is 100%.

Group of orthologs #871. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 D.pseudoobscura:469

F6Z672              	100.00%		Q295E6              	100.00%
Bootstrap support for F6Z672 as seed ortholog is 100%.
Bootstrap support for Q295E6 as seed ortholog is 100%.

Group of orthologs #872. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 D.pseudoobscura:296

F7A713              	100.00%		Q29BD5              	100.00%
Bootstrap support for F7A713 as seed ortholog is 100%.
Bootstrap support for Q29BD5 as seed ortholog is 100%.

Group of orthologs #873. Best score 469 bits
Score difference with first non-orthologous sequence - C.intestinalis:469 D.pseudoobscura:469

H2XZM3              	100.00%		Q28ZC1              	100.00%
Bootstrap support for H2XZM3 as seed ortholog is 100%.
Bootstrap support for Q28ZC1 as seed ortholog is 100%.

Group of orthologs #874. Best score 468 bits
Score difference with first non-orthologous sequence - C.intestinalis:468 D.pseudoobscura:468

F6USH9              	100.00%		Q29IQ0              	100.00%
Bootstrap support for F6USH9 as seed ortholog is 100%.
Bootstrap support for Q29IQ0 as seed ortholog is 100%.

Group of orthologs #875. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:467

F6TJJ7              	100.00%		B5DHT6              	100.00%
                    	       		Q2M0V5              	64.35%
Bootstrap support for F6TJJ7 as seed ortholog is 99%.
Bootstrap support for B5DHT6 as seed ortholog is 100%.

Group of orthologs #876. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 D.pseudoobscura:60

F6TX56              	100.00%		Q28ZS9              	100.00%
Bootstrap support for F6TX56 as seed ortholog is 100%.
Bootstrap support for Q28ZS9 as seed ortholog is 96%.

Group of orthologs #877. Best score 467 bits
Score difference with first non-orthologous sequence - C.intestinalis:467 D.pseudoobscura:152

F6U8Z7              	100.00%		Q29NE1              	100.00%
Bootstrap support for F6U8Z7 as seed ortholog is 100%.
Bootstrap support for Q29NE1 as seed ortholog is 99%.

Group of orthologs #878. Best score 466 bits
Score difference with first non-orthologous sequence - C.intestinalis:466 D.pseudoobscura:213

F6TZU9              	100.00%		Q29IY5              	100.00%
Bootstrap support for F6TZU9 as seed ortholog is 100%.
Bootstrap support for Q29IY5 as seed ortholog is 99%.

Group of orthologs #879. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 D.pseudoobscura:465

F6QE16              	100.00%		B5DJT8              	100.00%
Bootstrap support for F6QE16 as seed ortholog is 100%.
Bootstrap support for B5DJT8 as seed ortholog is 100%.

Group of orthologs #880. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 D.pseudoobscura:165

F6TEN3              	100.00%		B5DWN6              	100.00%
Bootstrap support for F6TEN3 as seed ortholog is 79%.
Bootstrap support for B5DWN6 as seed ortholog is 99%.

Group of orthologs #881. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:149

F6SML2              	100.00%		Q28YH5              	100.00%
Bootstrap support for F6SML2 as seed ortholog is 99%.
Bootstrap support for Q28YH5 as seed ortholog is 99%.

Group of orthologs #882. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 D.pseudoobscura:465

F6YVU0              	100.00%		Q29FJ0              	100.00%
Bootstrap support for F6YVU0 as seed ortholog is 100%.
Bootstrap support for Q29FJ0 as seed ortholog is 100%.

Group of orthologs #883. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 D.pseudoobscura:465

F6YGJ1              	100.00%		Q29HT0              	100.00%
Bootstrap support for F6YGJ1 as seed ortholog is 100%.
Bootstrap support for Q29HT0 as seed ortholog is 100%.

Group of orthologs #884. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 D.pseudoobscura:374

H2XVD0              	100.00%		Q298D6              	100.00%
Bootstrap support for H2XVD0 as seed ortholog is 100%.
Bootstrap support for Q298D6 as seed ortholog is 100%.

Group of orthologs #885. Best score 465 bits
Score difference with first non-orthologous sequence - C.intestinalis:465 D.pseudoobscura:465

F7BHB2              	100.00%		Q29PE0              	100.00%
Bootstrap support for F7BHB2 as seed ortholog is 100%.
Bootstrap support for Q29PE0 as seed ortholog is 100%.

Group of orthologs #886. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 D.pseudoobscura:362

F6WY28              	100.00%		B5DYS6              	100.00%
Bootstrap support for F6WY28 as seed ortholog is 99%.
Bootstrap support for B5DYS6 as seed ortholog is 100%.

Group of orthologs #887. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:464 D.pseudoobscura:464

F6TGX2              	100.00%		Q296E3              	100.00%
Bootstrap support for F6TGX2 as seed ortholog is 100%.
Bootstrap support for Q296E3 as seed ortholog is 100%.

Group of orthologs #888. Best score 464 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 D.pseudoobscura:239

Q4H3D5              	100.00%		Q29JT9              	100.00%
Bootstrap support for Q4H3D5 as seed ortholog is 100%.
Bootstrap support for Q29JT9 as seed ortholog is 100%.

Group of orthologs #889. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 D.pseudoobscura:347

F6PJL7              	100.00%		Q29FS7              	100.00%
Bootstrap support for F6PJL7 as seed ortholog is 100%.
Bootstrap support for Q29FS7 as seed ortholog is 100%.

Group of orthologs #890. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 D.pseudoobscura:463

F6V766              	100.00%		Q295D2              	100.00%
Bootstrap support for F6V766 as seed ortholog is 100%.
Bootstrap support for Q295D2 as seed ortholog is 100%.

Group of orthologs #891. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 D.pseudoobscura:463

F6YFG4              	100.00%		Q29B13              	100.00%
Bootstrap support for F6YFG4 as seed ortholog is 100%.
Bootstrap support for Q29B13 as seed ortholog is 100%.

Group of orthologs #892. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 D.pseudoobscura:379

F7AEM1              	100.00%		Q29P91              	100.00%
Bootstrap support for F7AEM1 as seed ortholog is 100%.
Bootstrap support for Q29P91 as seed ortholog is 100%.

Group of orthologs #893. Best score 463 bits
Score difference with first non-orthologous sequence - C.intestinalis:463 D.pseudoobscura:463

H2XL44              	100.00%		Q29MV1              	100.00%
Bootstrap support for H2XL44 as seed ortholog is 100%.
Bootstrap support for Q29MV1 as seed ortholog is 100%.

Group of orthologs #894. Best score 462 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 D.pseudoobscura:462

F6Q2U2              	100.00%		Q296W6              	100.00%
Bootstrap support for F6Q2U2 as seed ortholog is 100%.
Bootstrap support for Q296W6 as seed ortholog is 100%.

Group of orthologs #895. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:461 D.pseudoobscura:52

F6UTV1              	100.00%		B5DPQ3              	100.00%
Bootstrap support for F6UTV1 as seed ortholog is 100%.
Bootstrap support for B5DPQ3 as seed ortholog is 97%.

Group of orthologs #896. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 D.pseudoobscura:303

F6R9S1              	100.00%		Q291I1              	100.00%
Bootstrap support for F6R9S1 as seed ortholog is 100%.
Bootstrap support for Q291I1 as seed ortholog is 100%.

Group of orthologs #897. Best score 461 bits
Score difference with first non-orthologous sequence - C.intestinalis:461 D.pseudoobscura:461

F6VZF6              	100.00%		Q2LZ76              	100.00%
Bootstrap support for F6VZF6 as seed ortholog is 100%.
Bootstrap support for Q2LZ76 as seed ortholog is 100%.

Group of orthologs #898. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 D.pseudoobscura:460

F6RXZ8              	100.00%		Q28ZX7              	100.00%
Bootstrap support for F6RXZ8 as seed ortholog is 100%.
Bootstrap support for Q28ZX7 as seed ortholog is 100%.

Group of orthologs #899. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 D.pseudoobscura:324

F7AXN3              	100.00%		B5E1L1              	100.00%
Bootstrap support for F7AXN3 as seed ortholog is 100%.
Bootstrap support for B5E1L1 as seed ortholog is 100%.

Group of orthologs #900. Best score 460 bits
Score difference with first non-orthologous sequence - C.intestinalis:460 D.pseudoobscura:353

F6VZQ9              	100.00%		Q29MN2              	100.00%
Bootstrap support for F6VZQ9 as seed ortholog is 100%.
Bootstrap support for Q29MN2 as seed ortholog is 100%.

Group of orthologs #901. Best score 459 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 D.pseudoobscura:152

H2XP89              	100.00%		Q29FK8              	100.00%
Bootstrap support for H2XP89 as seed ortholog is 100%.
Bootstrap support for Q29FK8 as seed ortholog is 99%.

Group of orthologs #902. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 D.pseudoobscura:458

F6YEL1              	100.00%		B5DYP7              	100.00%
                    	       		I5APH0              	52.10%
Bootstrap support for F6YEL1 as seed ortholog is 99%.
Bootstrap support for B5DYP7 as seed ortholog is 100%.

Group of orthologs #903. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 D.pseudoobscura:367

F6PQW9              	100.00%		Q29KX2              	100.00%
Bootstrap support for F6PQW9 as seed ortholog is 100%.
Bootstrap support for Q29KX2 as seed ortholog is 100%.

Group of orthologs #904. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:458 D.pseudoobscura:458

F6XMT2              	100.00%		Q29G89              	100.00%
Bootstrap support for F6XMT2 as seed ortholog is 100%.
Bootstrap support for Q29G89 as seed ortholog is 100%.

Group of orthologs #905. Best score 458 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 D.pseudoobscura:317

F7B7G6              	100.00%		Q29JE7              	100.00%
Bootstrap support for F7B7G6 as seed ortholog is 100%.
Bootstrap support for Q29JE7 as seed ortholog is 100%.

Group of orthologs #906. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 D.pseudoobscura:152

F6W6K0              	100.00%		Q29LX1              	100.00%
Bootstrap support for F6W6K0 as seed ortholog is 99%.
Bootstrap support for Q29LX1 as seed ortholog is 99%.

Group of orthologs #907. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 D.pseudoobscura:457

F7AVN1              	100.00%		Q2LYK1              	100.00%
Bootstrap support for F7AVN1 as seed ortholog is 100%.
Bootstrap support for Q2LYK1 as seed ortholog is 100%.

Group of orthologs #908. Best score 457 bits
Score difference with first non-orthologous sequence - C.intestinalis:457 D.pseudoobscura:457

Q1RPX1              	100.00%		Q29NY2              	100.00%
Bootstrap support for Q1RPX1 as seed ortholog is 100%.
Bootstrap support for Q29NY2 as seed ortholog is 100%.

Group of orthologs #909. Best score 456 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 D.pseudoobscura:456

F6UUU5              	100.00%		B5DMV4              	100.00%
Bootstrap support for F6UUU5 as seed ortholog is 98%.
Bootstrap support for B5DMV4 as seed ortholog is 100%.

Group of orthologs #910. Best score 455 bits
Score difference with first non-orthologous sequence - C.intestinalis:455 D.pseudoobscura:349

F7AGW4              	100.00%		B5DR47              	100.00%
                    	       		B5DVZ7              	44.28%
Bootstrap support for F7AGW4 as seed ortholog is 100%.
Bootstrap support for B5DR47 as seed ortholog is 100%.

Group of orthologs #911. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 D.pseudoobscura:454

F6TJV9              	100.00%		Q29GZ6              	100.00%
Bootstrap support for F6TJV9 as seed ortholog is 100%.
Bootstrap support for Q29GZ6 as seed ortholog is 100%.

Group of orthologs #912. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 D.pseudoobscura:454

F7AX37              	100.00%		Q28ZX5              	100.00%
Bootstrap support for F7AX37 as seed ortholog is 100%.
Bootstrap support for Q28ZX5 as seed ortholog is 100%.

Group of orthologs #913. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:454 D.pseudoobscura:454

F6YFB9              	100.00%		Q29BD4              	100.00%
Bootstrap support for F6YFB9 as seed ortholog is 100%.
Bootstrap support for Q29BD4 as seed ortholog is 100%.

Group of orthologs #914. Best score 454 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 D.pseudoobscura:88

F7AFK4              	100.00%		Q29DI2              	100.00%
Bootstrap support for F7AFK4 as seed ortholog is 94%.
Bootstrap support for Q29DI2 as seed ortholog is 97%.

Group of orthologs #915. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 D.pseudoobscura:453

F6UZT3              	100.00%		B5DSH0              	100.00%
F6TKP9              	39.30%		
Bootstrap support for F6UZT3 as seed ortholog is 100%.
Bootstrap support for B5DSH0 as seed ortholog is 100%.

Group of orthologs #916. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 D.pseudoobscura:453

Q32TF6              	100.00%		Q28X04              	100.00%
                    	       		Q29CI0              	40.57%
Bootstrap support for Q32TF6 as seed ortholog is 99%.
Bootstrap support for Q28X04 as seed ortholog is 100%.

Group of orthologs #917. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:453 D.pseudoobscura:453

F6QZI8              	100.00%		Q28YQ9              	100.00%
Bootstrap support for F6QZI8 as seed ortholog is 100%.
Bootstrap support for Q28YQ9 as seed ortholog is 100%.

Group of orthologs #918. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 D.pseudoobscura:145

F6PKL5              	100.00%		Q29A24              	100.00%
Bootstrap support for F6PKL5 as seed ortholog is 100%.
Bootstrap support for Q29A24 as seed ortholog is 99%.

Group of orthologs #919. Best score 453 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 D.pseudoobscura:453

F6U222              	100.00%		Q29E44              	100.00%
Bootstrap support for F6U222 as seed ortholog is 100%.
Bootstrap support for Q29E44 as seed ortholog is 100%.

Group of orthologs #920. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:452 D.pseudoobscura:452

F6TIM2              	100.00%		Q28ZT4              	100.00%
Bootstrap support for F6TIM2 as seed ortholog is 100%.
Bootstrap support for Q28ZT4 as seed ortholog is 100%.

Group of orthologs #921. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 D.pseudoobscura:364

F6TYX5              	100.00%		Q29AV1              	100.00%
Bootstrap support for F6TYX5 as seed ortholog is 100%.
Bootstrap support for Q29AV1 as seed ortholog is 100%.

Group of orthologs #922. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:452 D.pseudoobscura:452

F6YM78              	100.00%		Q29EV1              	100.00%
Bootstrap support for F6YM78 as seed ortholog is 100%.
Bootstrap support for Q29EV1 as seed ortholog is 100%.

Group of orthologs #923. Best score 452 bits
Score difference with first non-orthologous sequence - C.intestinalis:452 D.pseudoobscura:452

F6XLX0              	100.00%		Q2LYK3              	100.00%
Bootstrap support for F6XLX0 as seed ortholog is 100%.
Bootstrap support for Q2LYK3 as seed ortholog is 100%.

Group of orthologs #924. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 D.pseudoobscura:451

F6PHI7              	100.00%		B5DLQ0              	100.00%
Bootstrap support for F6PHI7 as seed ortholog is 99%.
Bootstrap support for B5DLQ0 as seed ortholog is 100%.

Group of orthologs #925. Best score 451 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 D.pseudoobscura:166

H2XSR0              	100.00%		I5AMP5              	100.00%
Bootstrap support for H2XSR0 as seed ortholog is 99%.
Bootstrap support for I5AMP5 as seed ortholog is 99%.

Group of orthologs #926. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 D.pseudoobscura:450

F6VUM2              	100.00%		Q29H28              	100.00%
                    	       		Q29NQ0              	18.32%
Bootstrap support for F6VUM2 as seed ortholog is 100%.
Bootstrap support for Q29H28 as seed ortholog is 100%.

Group of orthologs #927. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 D.pseudoobscura:450

F6UZU2              	100.00%		Q29LZ2              	100.00%
                    	       		Q29LL9              	11.85%
Bootstrap support for F6UZU2 as seed ortholog is 100%.
Bootstrap support for Q29LZ2 as seed ortholog is 100%.

Group of orthologs #928. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:450 D.pseudoobscura:212

F6ZGR3              	100.00%		B5DXC1              	100.00%
Bootstrap support for F6ZGR3 as seed ortholog is 100%.
Bootstrap support for B5DXC1 as seed ortholog is 99%.

Group of orthologs #929. Best score 450 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 D.pseudoobscura:450

F6UEZ5              	100.00%		Q299W2              	100.00%
Bootstrap support for F6UEZ5 as seed ortholog is 100%.
Bootstrap support for Q299W2 as seed ortholog is 100%.

Group of orthologs #930. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 D.pseudoobscura:449

F6SFP2              	100.00%		Q29J88              	100.00%
Bootstrap support for F6SFP2 as seed ortholog is 100%.
Bootstrap support for Q29J88 as seed ortholog is 100%.

Group of orthologs #931. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 D.pseudoobscura:181

F6YNE2              	100.00%		Q294H9              	100.00%
Bootstrap support for F6YNE2 as seed ortholog is 100%.
Bootstrap support for Q294H9 as seed ortholog is 100%.

Group of orthologs #932. Best score 449 bits
Score difference with first non-orthologous sequence - C.intestinalis:449 D.pseudoobscura:449

F6ZLM3              	100.00%		Q29DM5              	100.00%
Bootstrap support for F6ZLM3 as seed ortholog is 100%.
Bootstrap support for Q29DM5 as seed ortholog is 100%.

Group of orthologs #933. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 D.pseudoobscura:448

F6PP44              	100.00%		I5AP73              	100.00%
                    	       		Q297B4              	19.19%
Bootstrap support for F6PP44 as seed ortholog is 100%.
Bootstrap support for I5AP73 as seed ortholog is 100%.

Group of orthologs #934. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 D.pseudoobscura:448

F6TC27              	100.00%		Q28WK1              	100.00%
Bootstrap support for F6TC27 as seed ortholog is 99%.
Bootstrap support for Q28WK1 as seed ortholog is 100%.

Group of orthologs #935. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 D.pseudoobscura:448

F6SAH8              	100.00%		Q297I8              	100.00%
Bootstrap support for F6SAH8 as seed ortholog is 100%.
Bootstrap support for Q297I8 as seed ortholog is 100%.

Group of orthologs #936. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 D.pseudoobscura:178

F6W673              	100.00%		Q28XS5              	100.00%
Bootstrap support for F6W673 as seed ortholog is 100%.
Bootstrap support for Q28XS5 as seed ortholog is 99%.

Group of orthologs #937. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 D.pseudoobscura:448

F7AZV0              	100.00%		B5DX95              	100.00%
Bootstrap support for F7AZV0 as seed ortholog is 100%.
Bootstrap support for B5DX95 as seed ortholog is 100%.

Group of orthologs #938. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 D.pseudoobscura:448

H2XYW0              	100.00%		Q28WV0              	100.00%
Bootstrap support for H2XYW0 as seed ortholog is 100%.
Bootstrap support for Q28WV0 as seed ortholog is 100%.

Group of orthologs #939. Best score 448 bits
Score difference with first non-orthologous sequence - C.intestinalis:448 D.pseudoobscura:448

F7AAC1              	100.00%		Q2M052              	100.00%
Bootstrap support for F7AAC1 as seed ortholog is 100%.
Bootstrap support for Q2M052 as seed ortholog is 100%.

Group of orthologs #940. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 D.pseudoobscura:447

F7ACB9              	100.00%		B5DLX9              	100.00%
Bootstrap support for F7ACB9 as seed ortholog is 100%.
Bootstrap support for B5DLX9 as seed ortholog is 100%.

Group of orthologs #941. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 D.pseudoobscura:447

F6SM47              	100.00%		Q29GX7              	100.00%
Bootstrap support for F6SM47 as seed ortholog is 100%.
Bootstrap support for Q29GX7 as seed ortholog is 100%.

Group of orthologs #942. Best score 447 bits
Score difference with first non-orthologous sequence - C.intestinalis:447 D.pseudoobscura:447

F6VN41              	100.00%		Q29KS5              	100.00%
Bootstrap support for F6VN41 as seed ortholog is 100%.
Bootstrap support for Q29KS5 as seed ortholog is 100%.

Group of orthologs #943. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 D.pseudoobscura:446

H2Y048              	100.00%		Q298B2              	100.00%
F6S5A6              	35.75%		
Bootstrap support for H2Y048 as seed ortholog is 100%.
Bootstrap support for Q298B2 as seed ortholog is 100%.

Group of orthologs #944. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 D.pseudoobscura:446

H2XW46              	100.00%		Q29F82              	100.00%
H2XPW9              	24.19%		
Bootstrap support for H2XW46 as seed ortholog is 100%.
Bootstrap support for Q29F82 as seed ortholog is 100%.

Group of orthologs #945. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 D.pseudoobscura:243

F6PYE4              	100.00%		B5E1B7              	100.00%
Bootstrap support for F6PYE4 as seed ortholog is 100%.
Bootstrap support for B5E1B7 as seed ortholog is 99%.

Group of orthologs #946. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 D.pseudoobscura:40

F6SCX5              	100.00%		Q28YV2              	100.00%
Bootstrap support for F6SCX5 as seed ortholog is 100%.
Bootstrap support for Q28YV2 as seed ortholog is 81%.

Group of orthologs #947. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 D.pseudoobscura:446

F6SGK0              	100.00%		Q291J2              	100.00%
Bootstrap support for F6SGK0 as seed ortholog is 99%.
Bootstrap support for Q291J2 as seed ortholog is 100%.

Group of orthologs #948. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 D.pseudoobscura:272

F6WQV1              	100.00%		B5E083              	100.00%
Bootstrap support for F6WQV1 as seed ortholog is 100%.
Bootstrap support for B5E083 as seed ortholog is 100%.

Group of orthologs #949. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 D.pseudoobscura:446

F6TBI8              	100.00%		Q29D84              	100.00%
Bootstrap support for F6TBI8 as seed ortholog is 100%.
Bootstrap support for Q29D84 as seed ortholog is 100%.

Group of orthologs #950. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 D.pseudoobscura:446

F6YK29              	100.00%		Q2LZM5              	100.00%
Bootstrap support for F6YK29 as seed ortholog is 100%.
Bootstrap support for Q2LZM5 as seed ortholog is 100%.

Group of orthologs #951. Best score 446 bits
Score difference with first non-orthologous sequence - C.intestinalis:446 D.pseudoobscura:446

H2XWZ0              	100.00%		Q298Q4              	100.00%
Bootstrap support for H2XWZ0 as seed ortholog is 100%.
Bootstrap support for Q298Q4 as seed ortholog is 100%.

Group of orthologs #952. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 D.pseudoobscura:288

F6SGJ4              	100.00%		B5DHR7              	100.00%
Bootstrap support for F6SGJ4 as seed ortholog is 100%.
Bootstrap support for B5DHR7 as seed ortholog is 100%.

Group of orthologs #953. Best score 445 bits
Score difference with first non-orthologous sequence - C.intestinalis:445 D.pseudoobscura:445

F6UE78              	100.00%		Q29HE6              	100.00%
Bootstrap support for F6UE78 as seed ortholog is 100%.
Bootstrap support for Q29HE6 as seed ortholog is 100%.

Group of orthologs #954. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 D.pseudoobscura:352

F6XWW8              	100.00%		B5DHQ5              	100.00%
Bootstrap support for F6XWW8 as seed ortholog is 100%.
Bootstrap support for B5DHQ5 as seed ortholog is 100%.

Group of orthologs #955. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 D.pseudoobscura:82

F6PGY3              	100.00%		Q29EN8              	100.00%
Bootstrap support for F6PGY3 as seed ortholog is 99%.
Bootstrap support for Q29EN8 as seed ortholog is 99%.

Group of orthologs #956. Best score 444 bits
Score difference with first non-orthologous sequence - C.intestinalis:444 D.pseudoobscura:444

F6VKI2              	100.00%		Q296V3              	100.00%
Bootstrap support for F6VKI2 as seed ortholog is 100%.
Bootstrap support for Q296V3 as seed ortholog is 100%.

Group of orthologs #957. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 D.pseudoobscura:160

H2XXD3              	100.00%		B5DPG8              	100.00%
Bootstrap support for H2XXD3 as seed ortholog is 100%.
Bootstrap support for B5DPG8 as seed ortholog is 100%.

Group of orthologs #958. Best score 443 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 D.pseudoobscura:149

F7ARV5              	100.00%		Q290U3              	100.00%
Bootstrap support for F7ARV5 as seed ortholog is 100%.
Bootstrap support for Q290U3 as seed ortholog is 100%.

Group of orthologs #959. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 D.pseudoobscura:442

H2XK55              	100.00%		Q293A0              	100.00%
H2Y2M6              	74.93%		
Bootstrap support for H2XK55 as seed ortholog is 100%.
Bootstrap support for Q293A0 as seed ortholog is 100%.

Group of orthologs #960. Best score 442 bits
Score difference with first non-orthologous sequence - C.intestinalis:442 D.pseudoobscura:205

F6YD09              	100.00%		Q29CE1              	100.00%
Bootstrap support for F6YD09 as seed ortholog is 100%.
Bootstrap support for Q29CE1 as seed ortholog is 99%.

Group of orthologs #961. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 D.pseudoobscura:290

F6V6X8              	100.00%		B5DK35              	100.00%
Bootstrap support for F6V6X8 as seed ortholog is 100%.
Bootstrap support for B5DK35 as seed ortholog is 100%.

Group of orthologs #962. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 D.pseudoobscura:441

F7BHR3              	100.00%		Q28WQ8              	100.00%
Bootstrap support for F7BHR3 as seed ortholog is 100%.
Bootstrap support for Q28WQ8 as seed ortholog is 100%.

Group of orthologs #963. Best score 441 bits
Score difference with first non-orthologous sequence - C.intestinalis:441 D.pseudoobscura:377

H2XR08              	100.00%		Q293R5              	100.00%
Bootstrap support for H2XR08 as seed ortholog is 100%.
Bootstrap support for Q293R5 as seed ortholog is 100%.

Group of orthologs #964. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 D.pseudoobscura:440

F6YUL2              	100.00%		Q29D19              	100.00%
Bootstrap support for F6YUL2 as seed ortholog is 100%.
Bootstrap support for Q29D19 as seed ortholog is 100%.

Group of orthologs #965. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 D.pseudoobscura:312

F7ACA9              	100.00%		Q29JA5              	100.00%
Bootstrap support for F7ACA9 as seed ortholog is 100%.
Bootstrap support for Q29JA5 as seed ortholog is 100%.

Group of orthologs #966. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 D.pseudoobscura:440

H2XPW5              	100.00%		Q29H29              	100.00%
Bootstrap support for H2XPW5 as seed ortholog is 100%.
Bootstrap support for Q29H29 as seed ortholog is 100%.

Group of orthologs #967. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 D.pseudoobscura:180

H2XYF8              	100.00%		Q29DV1              	100.00%
Bootstrap support for H2XYF8 as seed ortholog is 100%.
Bootstrap support for Q29DV1 as seed ortholog is 100%.

Group of orthologs #968. Best score 440 bits
Score difference with first non-orthologous sequence - C.intestinalis:440 D.pseudoobscura:370

H2XQB0              	100.00%		Q29P36              	100.00%
Bootstrap support for H2XQB0 as seed ortholog is 100%.
Bootstrap support for Q29P36 as seed ortholog is 100%.

Group of orthologs #969. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 D.pseudoobscura:439

F6PHM0              	100.00%		B5DHY3              	100.00%
Bootstrap support for F6PHM0 as seed ortholog is 100%.
Bootstrap support for B5DHY3 as seed ortholog is 100%.

Group of orthologs #970. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 D.pseudoobscura:284

F6REQ0              	100.00%		Q290B2              	100.00%
Bootstrap support for F6REQ0 as seed ortholog is 100%.
Bootstrap support for Q290B2 as seed ortholog is 100%.

Group of orthologs #971. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 D.pseudoobscura:439

F6V4L6              	100.00%		I5APQ3              	100.00%
Bootstrap support for F6V4L6 as seed ortholog is 100%.
Bootstrap support for I5APQ3 as seed ortholog is 100%.

Group of orthologs #972. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 D.pseudoobscura:439

F6WXJ5              	100.00%		Q29BL4              	100.00%
Bootstrap support for F6WXJ5 as seed ortholog is 100%.
Bootstrap support for Q29BL4 as seed ortholog is 100%.

Group of orthologs #973. Best score 439 bits
Score difference with first non-orthologous sequence - C.intestinalis:439 D.pseudoobscura:355

F7BLS5              	100.00%		Q29PI4              	100.00%
Bootstrap support for F7BLS5 as seed ortholog is 100%.
Bootstrap support for Q29PI4 as seed ortholog is 100%.

Group of orthologs #974. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 D.pseudoobscura:438

F7A172              	100.00%		B5DK39              	100.00%
Bootstrap support for F7A172 as seed ortholog is 100%.
Bootstrap support for B5DK39 as seed ortholog is 100%.

Group of orthologs #975. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 D.pseudoobscura:438

F6RA92              	100.00%		Q29DD6              	100.00%
Bootstrap support for F6RA92 as seed ortholog is 100%.
Bootstrap support for Q29DD6 as seed ortholog is 100%.

Group of orthologs #976. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 D.pseudoobscura:438

F6WAW7              	100.00%		Q29M36              	100.00%
Bootstrap support for F6WAW7 as seed ortholog is 100%.
Bootstrap support for Q29M36 as seed ortholog is 100%.

Group of orthologs #977. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 D.pseudoobscura:438

F7B7E9              	100.00%		Q298Y4              	100.00%
Bootstrap support for F7B7E9 as seed ortholog is 100%.
Bootstrap support for Q298Y4 as seed ortholog is 100%.

Group of orthologs #978. Best score 438 bits
Score difference with first non-orthologous sequence - C.intestinalis:438 D.pseudoobscura:438

F6YQR4              	100.00%		Q29NS9              	100.00%
Bootstrap support for F6YQR4 as seed ortholog is 100%.
Bootstrap support for Q29NS9 as seed ortholog is 100%.

Group of orthologs #979. Best score 437 bits
Score difference with first non-orthologous sequence - C.intestinalis:437 D.pseudoobscura:178

F6YNQ3              	100.00%		Q29AP6              	100.00%
Bootstrap support for F6YNQ3 as seed ortholog is 100%.
Bootstrap support for Q29AP6 as seed ortholog is 100%.

Group of orthologs #980. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 D.pseudoobscura:436

F7BFE1              	100.00%		B5DZA5              	100.00%
                    	       		B5DRZ4              	8.66%
Bootstrap support for F7BFE1 as seed ortholog is 48%.
Alternative seed ortholog is F6XSE6 (1 bits away from this cluster)
Bootstrap support for B5DZA5 as seed ortholog is 100%.

Group of orthologs #981. Best score 436 bits
Score difference with first non-orthologous sequence - C.intestinalis:436 D.pseudoobscura:436

F6SZ37              	100.00%		Q29CF0              	100.00%
Bootstrap support for F6SZ37 as seed ortholog is 100%.
Bootstrap support for Q29CF0 as seed ortholog is 100%.

Group of orthologs #982. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 D.pseudoobscura:435

F6ZHM4              	100.00%		B5DXK5              	100.00%
                    	       		B5DU58              	99.25%
Bootstrap support for F6ZHM4 as seed ortholog is 100%.
Bootstrap support for B5DXK5 as seed ortholog is 100%.

Group of orthologs #983. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 D.pseudoobscura:435

F6ZRT4              	100.00%		Q28YS1              	100.00%
Bootstrap support for F6ZRT4 as seed ortholog is 100%.
Bootstrap support for Q28YS1 as seed ortholog is 100%.

Group of orthologs #984. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 D.pseudoobscura:77

F6ZPV8              	100.00%		Q29BG6              	100.00%
Bootstrap support for F6ZPV8 as seed ortholog is 100%.
Bootstrap support for Q29BG6 as seed ortholog is 98%.

Group of orthologs #985. Best score 435 bits
Score difference with first non-orthologous sequence - C.intestinalis:435 D.pseudoobscura:335

F7ASK1              	100.00%		Q29F36              	100.00%
Bootstrap support for F7ASK1 as seed ortholog is 100%.
Bootstrap support for Q29F36 as seed ortholog is 100%.

Group of orthologs #986. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:434

F6X1K6              	100.00%		Q29EA9              	100.00%
                    	       		Q29HU5              	10.09%
Bootstrap support for F6X1K6 as seed ortholog is 99%.
Bootstrap support for Q29EA9 as seed ortholog is 100%.

Group of orthologs #987. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 D.pseudoobscura:346

F6R999              	100.00%		B5DQU1              	100.00%
Bootstrap support for F6R999 as seed ortholog is 100%.
Bootstrap support for B5DQU1 as seed ortholog is 100%.

Group of orthologs #988. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 D.pseudoobscura:434

F6SQE9              	100.00%		Q28ZH5              	100.00%
Bootstrap support for F6SQE9 as seed ortholog is 100%.
Bootstrap support for Q28ZH5 as seed ortholog is 100%.

Group of orthologs #989. Best score 434 bits
Score difference with first non-orthologous sequence - C.intestinalis:434 D.pseudoobscura:125

F6UZS7              	100.00%		Q27928              	100.00%
Bootstrap support for F6UZS7 as seed ortholog is 100%.
Bootstrap support for Q27928 as seed ortholog is 99%.

Group of orthologs #990. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 D.pseudoobscura:433

F6ZFS8              	100.00%		Q2LZ33              	100.00%
F6UR25              	6.38%		
Bootstrap support for F6ZFS8 as seed ortholog is 100%.
Bootstrap support for Q2LZ33 as seed ortholog is 100%.

Group of orthologs #991. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 D.pseudoobscura:433

F6RN60              	100.00%		Q28YJ2              	100.00%
Bootstrap support for F6RN60 as seed ortholog is 100%.
Bootstrap support for Q28YJ2 as seed ortholog is 100%.

Group of orthologs #992. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 D.pseudoobscura:433

F6QEV0              	100.00%		Q29BH6              	100.00%
Bootstrap support for F6QEV0 as seed ortholog is 100%.
Bootstrap support for Q29BH6 as seed ortholog is 100%.

Group of orthologs #993. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:433 D.pseudoobscura:242

F6UGN5              	100.00%		Q29IU6              	100.00%
Bootstrap support for F6UGN5 as seed ortholog is 100%.
Bootstrap support for Q29IU6 as seed ortholog is 100%.

Group of orthologs #994. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 D.pseudoobscura:433

F7BH52              	100.00%		Q29NY1              	100.00%
Bootstrap support for F7BH52 as seed ortholog is 99%.
Bootstrap support for Q29NY1 as seed ortholog is 100%.

Group of orthologs #995. Best score 433 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 D.pseudoobscura:433

H2XM50              	100.00%		Q29PM1              	100.00%
Bootstrap support for H2XM50 as seed ortholog is 81%.
Bootstrap support for Q29PM1 as seed ortholog is 100%.

Group of orthologs #996. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 D.pseudoobscura:432

F6VES6              	100.00%		Q28YK0              	100.00%
F6W5K3              	23.41%		
Bootstrap support for F6VES6 as seed ortholog is 96%.
Bootstrap support for Q28YK0 as seed ortholog is 100%.

Group of orthologs #997. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 D.pseudoobscura:49

F6XVB0              	100.00%		Q29K73              	100.00%
Q8T8A6              	9.37%		
Bootstrap support for F6XVB0 as seed ortholog is 100%.
Bootstrap support for Q29K73 as seed ortholog is 89%.

Group of orthologs #998. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 D.pseudoobscura:432

F6QXQ1              	100.00%		Q29DD3              	100.00%
Bootstrap support for F6QXQ1 as seed ortholog is 100%.
Bootstrap support for Q29DD3 as seed ortholog is 100%.

Group of orthologs #999. Best score 432 bits
Score difference with first non-orthologous sequence - C.intestinalis:432 D.pseudoobscura:432

H2XT92              	100.00%		Q28XI0              	100.00%
Bootstrap support for H2XT92 as seed ortholog is 100%.
Bootstrap support for Q28XI0 as seed ortholog is 100%.

Group of orthologs #1000. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:431

H2XQX1              	100.00%		Q298P4              	100.00%
                    	       		B5DHZ2              	14.97%
Bootstrap support for H2XQX1 as seed ortholog is 99%.
Bootstrap support for Q298P4 as seed ortholog is 100%.

Group of orthologs #1001. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 D.pseudoobscura:431

F6RJV3              	100.00%		Q28XD0              	100.00%
Bootstrap support for F6RJV3 as seed ortholog is 100%.
Bootstrap support for Q28XD0 as seed ortholog is 100%.

Group of orthologs #1002. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 D.pseudoobscura:431

F6V9Y2              	100.00%		Q29IZ4              	100.00%
Bootstrap support for F6V9Y2 as seed ortholog is 100%.
Bootstrap support for Q29IZ4 as seed ortholog is 100%.

Group of orthologs #1003. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:191

F7AZI8              	100.00%		Q29J32              	100.00%
Bootstrap support for F7AZI8 as seed ortholog is 100%.
Bootstrap support for Q29J32 as seed ortholog is 100%.

Group of orthologs #1004. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 D.pseudoobscura:431

F7A606              	100.00%		Q29NX2              	100.00%
Bootstrap support for F7A606 as seed ortholog is 100%.
Bootstrap support for Q29NX2 as seed ortholog is 100%.

Group of orthologs #1005. Best score 431 bits
Score difference with first non-orthologous sequence - C.intestinalis:431 D.pseudoobscura:431

H2XTN4              	100.00%		Q29N57              	100.00%
Bootstrap support for H2XTN4 as seed ortholog is 100%.
Bootstrap support for Q29N57 as seed ortholog is 100%.

Group of orthologs #1006. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 D.pseudoobscura:430

F6QIL3              	100.00%		Q29CT2              	100.00%
Bootstrap support for F6QIL3 as seed ortholog is 100%.
Bootstrap support for Q29CT2 as seed ortholog is 100%.

Group of orthologs #1007. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:430 D.pseudoobscura:430

F7BEC5              	100.00%		B5E0L1              	100.00%
Bootstrap support for F7BEC5 as seed ortholog is 100%.
Bootstrap support for B5E0L1 as seed ortholog is 100%.

Group of orthologs #1008. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 D.pseudoobscura:173

F6SUP0              	100.00%		Q29M62              	100.00%
Bootstrap support for F6SUP0 as seed ortholog is 99%.
Bootstrap support for Q29M62 as seed ortholog is 99%.

Group of orthologs #1009. Best score 430 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 D.pseudoobscura:430

F7A961              	100.00%		Q29AB8              	100.00%
Bootstrap support for F7A961 as seed ortholog is 99%.
Bootstrap support for Q29AB8 as seed ortholog is 100%.

Group of orthologs #1010. Best score 429 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 D.pseudoobscura:220

F6Z0V8              	100.00%		Q291H3              	100.00%
Bootstrap support for F6Z0V8 as seed ortholog is 100%.
Bootstrap support for Q291H3 as seed ortholog is 100%.

Group of orthologs #1011. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 D.pseudoobscura:229

F6S1D4              	100.00%		Q29G36              	100.00%
                    	       		B5DQ06              	28.42%
Bootstrap support for F6S1D4 as seed ortholog is 100%.
Bootstrap support for Q29G36 as seed ortholog is 100%.

Group of orthologs #1012. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 D.pseudoobscura:372

F6V779              	100.00%		Q29DQ4              	100.00%
Bootstrap support for F6V779 as seed ortholog is 100%.
Bootstrap support for Q29DQ4 as seed ortholog is 100%.

Group of orthologs #1013. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 D.pseudoobscura:182

F6ZSR8              	100.00%		Q290T0              	100.00%
Bootstrap support for F6ZSR8 as seed ortholog is 100%.
Bootstrap support for Q290T0 as seed ortholog is 100%.

Group of orthologs #1014. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 D.pseudoobscura:317

H2XS58              	100.00%		Q28X15              	100.00%
Bootstrap support for H2XS58 as seed ortholog is 100%.
Bootstrap support for Q28X15 as seed ortholog is 100%.

Group of orthologs #1015. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:428 D.pseudoobscura:428

H2XJF3              	100.00%		Q29GE3              	100.00%
Bootstrap support for H2XJF3 as seed ortholog is 100%.
Bootstrap support for Q29GE3 as seed ortholog is 100%.

Group of orthologs #1016. Best score 428 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 D.pseudoobscura:206

H2XZV4              	100.00%		Q29HD3              	100.00%
Bootstrap support for H2XZV4 as seed ortholog is 100%.
Bootstrap support for Q29HD3 as seed ortholog is 100%.

Group of orthologs #1017. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 D.pseudoobscura:427

F6RNB7              	100.00%		Q29GW7              	100.00%
Bootstrap support for F6RNB7 as seed ortholog is 100%.
Bootstrap support for Q29GW7 as seed ortholog is 100%.

Group of orthologs #1018. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 D.pseudoobscura:427

F6Q8U3              	100.00%		Q29N69              	100.00%
Bootstrap support for F6Q8U3 as seed ortholog is 100%.
Bootstrap support for Q29N69 as seed ortholog is 100%.

Group of orthologs #1019. Best score 427 bits
Score difference with first non-orthologous sequence - C.intestinalis:427 D.pseudoobscura:427

F6TBF9              	100.00%		Q2LYV5              	100.00%
Bootstrap support for F6TBF9 as seed ortholog is 100%.
Bootstrap support for Q2LYV5 as seed ortholog is 100%.

Group of orthologs #1020. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 D.pseudoobscura:426

F6USX3              	100.00%		Q29FW1              	100.00%
Bootstrap support for F6USX3 as seed ortholog is 100%.
Bootstrap support for Q29FW1 as seed ortholog is 100%.

Group of orthologs #1021. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 D.pseudoobscura:426

F7BKI5              	100.00%		Q29NT9              	100.00%
Bootstrap support for F7BKI5 as seed ortholog is 100%.
Bootstrap support for Q29NT9 as seed ortholog is 100%.

Group of orthologs #1022. Best score 426 bits
Score difference with first non-orthologous sequence - C.intestinalis:426 D.pseudoobscura:426

H2Y0B3              	100.00%		Q2LZX6              	100.00%
Bootstrap support for H2Y0B3 as seed ortholog is 100%.
Bootstrap support for Q2LZX6 as seed ortholog is 100%.

Group of orthologs #1023. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 D.pseudoobscura:140

F7AKV1              	100.00%		I5APK7              	100.00%
F7ACX7              	18.48%		
F6W4W6              	9.16%		
Bootstrap support for F7AKV1 as seed ortholog is 100%.
Bootstrap support for I5APK7 as seed ortholog is 98%.

Group of orthologs #1024. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 D.pseudoobscura:113

H2XWE4              	100.00%		Q29ND6              	100.00%
                    	       		B5DKQ5              	91.45%
                    	       		B5DKQ3              	59.83%
Bootstrap support for H2XWE4 as seed ortholog is 100%.
Bootstrap support for Q29ND6 as seed ortholog is 100%.

Group of orthologs #1025. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 D.pseudoobscura:347

F6R683              	100.00%		Q29GF7              	100.00%
Bootstrap support for F6R683 as seed ortholog is 100%.
Bootstrap support for Q29GF7 as seed ortholog is 100%.

Group of orthologs #1026. Best score 425 bits
Score difference with first non-orthologous sequence - C.intestinalis:425 D.pseudoobscura:289

F6R4T5              	100.00%		Q29LZ7              	100.00%
Bootstrap support for F6R4T5 as seed ortholog is 100%.
Bootstrap support for Q29LZ7 as seed ortholog is 100%.

Group of orthologs #1027. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 D.pseudoobscura:424

F6UXH9              	100.00%		Q29H07              	100.00%
                    	       		Q294X1              	18.04%
                    	       		B5DVY2              	17.63%
Bootstrap support for F6UXH9 as seed ortholog is 100%.
Bootstrap support for Q29H07 as seed ortholog is 100%.

Group of orthologs #1028. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 D.pseudoobscura:182

F6YLI3              	100.00%		Q29GH0              	100.00%
                    	       		B5DWW5              	13.78%
                    	       		Q293D3              	9.04%
Bootstrap support for F6YLI3 as seed ortholog is 91%.
Bootstrap support for Q29GH0 as seed ortholog is 100%.

Group of orthologs #1029. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 D.pseudoobscura:424

F6VT08              	100.00%		Q29IF7              	100.00%
                    	       		B5DIC8              	14.06%
Bootstrap support for F6VT08 as seed ortholog is 100%.
Bootstrap support for Q29IF7 as seed ortholog is 100%.

Group of orthologs #1030. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 D.pseudoobscura:117

F6ZYB8              	100.00%		Q28WU3              	100.00%
Bootstrap support for F6ZYB8 as seed ortholog is 72%.
Alternative seed ortholog is F6RCP1 (30 bits away from this cluster)
Bootstrap support for Q28WU3 as seed ortholog is 98%.

Group of orthologs #1031. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 D.pseudoobscura:285

H2XSK6              	100.00%		Q29N47              	100.00%
Bootstrap support for H2XSK6 as seed ortholog is 100%.
Bootstrap support for Q29N47 as seed ortholog is 100%.

Group of orthologs #1032. Best score 424 bits
Score difference with first non-orthologous sequence - C.intestinalis:424 D.pseudoobscura:117

H2Y2B7              	100.00%		Q29IL6              	100.00%
Bootstrap support for H2Y2B7 as seed ortholog is 100%.
Bootstrap support for Q29IL6 as seed ortholog is 96%.

Group of orthologs #1033. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 D.pseudoobscura:423

F6PYH8              	100.00%		Q29JV2              	100.00%
Bootstrap support for F6PYH8 as seed ortholog is 100%.
Bootstrap support for Q29JV2 as seed ortholog is 100%.

Group of orthologs #1034. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 D.pseudoobscura:423

F6WCA3              	100.00%		Q29GP1              	100.00%
Bootstrap support for F6WCA3 as seed ortholog is 100%.
Bootstrap support for Q29GP1 as seed ortholog is 100%.

Group of orthologs #1035. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 D.pseudoobscura:341

F6TTI3              	100.00%		Q29NI2              	100.00%
Bootstrap support for F6TTI3 as seed ortholog is 100%.
Bootstrap support for Q29NI2 as seed ortholog is 100%.

Group of orthologs #1036. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 D.pseudoobscura:423

F6X5M5              	100.00%		Q2LYJ4              	100.00%
Bootstrap support for F6X5M5 as seed ortholog is 100%.
Bootstrap support for Q2LYJ4 as seed ortholog is 100%.

Group of orthologs #1037. Best score 423 bits
Score difference with first non-orthologous sequence - C.intestinalis:423 D.pseudoobscura:423

F7BDV2              	100.00%		Q29JJ9              	100.00%
Bootstrap support for F7BDV2 as seed ortholog is 100%.
Bootstrap support for Q29JJ9 as seed ortholog is 100%.

Group of orthologs #1038. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 D.pseudoobscura:331

F6RTW0              	100.00%		Q294H1              	100.00%
Bootstrap support for F6RTW0 as seed ortholog is 99%.
Bootstrap support for Q294H1 as seed ortholog is 100%.

Group of orthologs #1039. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 D.pseudoobscura:422

F6Q5D4              	100.00%		Q29E27              	100.00%
Bootstrap support for F6Q5D4 as seed ortholog is 100%.
Bootstrap support for Q29E27 as seed ortholog is 100%.

Group of orthologs #1040. Best score 422 bits
Score difference with first non-orthologous sequence - C.intestinalis:422 D.pseudoobscura:422

F6QTS6              	100.00%		Q29D64              	100.00%
Bootstrap support for F6QTS6 as seed ortholog is 100%.
Bootstrap support for Q29D64 as seed ortholog is 100%.

Group of orthologs #1041. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 D.pseudoobscura:421

F6U5W6              	100.00%		B5DUJ0              	100.00%
                    	       		Q294T5              	100.00%
Bootstrap support for F6U5W6 as seed ortholog is 100%.
Bootstrap support for B5DUJ0 as seed ortholog is 100%.
Bootstrap support for Q294T5 as seed ortholog is 100%.

Group of orthologs #1042. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 D.pseudoobscura:421

F6VEU2              	100.00%		B5DXS3              	100.00%
Bootstrap support for F6VEU2 as seed ortholog is 100%.
Bootstrap support for B5DXS3 as seed ortholog is 100%.

Group of orthologs #1043. Best score 421 bits
Score difference with first non-orthologous sequence - C.intestinalis:421 D.pseudoobscura:421

F6QF37              	100.00%		Q299D3              	100.00%
Bootstrap support for F6QF37 as seed ortholog is 100%.
Bootstrap support for Q299D3 as seed ortholog is 100%.

Group of orthologs #1044. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 D.pseudoobscura:420

F6VDV2              	100.00%		I5APR9              	100.00%
Bootstrap support for F6VDV2 as seed ortholog is 100%.
Bootstrap support for I5APR9 as seed ortholog is 100%.

Group of orthologs #1045. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 D.pseudoobscura:292

F7A4A9              	100.00%		Q28Z97              	100.00%
Bootstrap support for F7A4A9 as seed ortholog is 100%.
Bootstrap support for Q28Z97 as seed ortholog is 100%.

Group of orthologs #1046. Best score 420 bits
Score difference with first non-orthologous sequence - C.intestinalis:420 D.pseudoobscura:420

H2XVM0              	100.00%		Q28WK0              	100.00%
Bootstrap support for H2XVM0 as seed ortholog is 100%.
Bootstrap support for Q28WK0 as seed ortholog is 100%.

Group of orthologs #1047. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 D.pseudoobscura:418

H2XQN8              	100.00%		Q291S9              	100.00%
                    	       		B5DHX9              	20.52%
                    	       		B5DVN8              	12.88%
Bootstrap support for H2XQN8 as seed ortholog is 100%.
Bootstrap support for Q291S9 as seed ortholog is 100%.

Group of orthologs #1048. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 D.pseudoobscura:418

F6PG92              	100.00%		Q296T3              	100.00%
Bootstrap support for F6PG92 as seed ortholog is 100%.
Bootstrap support for Q296T3 as seed ortholog is 100%.

Group of orthologs #1049. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:418 D.pseudoobscura:418

F6R4D8              	100.00%		Q293C6              	100.00%
Bootstrap support for F6R4D8 as seed ortholog is 100%.
Bootstrap support for Q293C6 as seed ortholog is 100%.

Group of orthologs #1050. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 D.pseudoobscura:340

F6SML9              	100.00%		Q297R7              	100.00%
Bootstrap support for F6SML9 as seed ortholog is 100%.
Bootstrap support for Q297R7 as seed ortholog is 100%.

Group of orthologs #1051. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 D.pseudoobscura:243

F6T718              	100.00%		Q29KB0              	100.00%
Bootstrap support for F6T718 as seed ortholog is 100%.
Bootstrap support for Q29KB0 as seed ortholog is 100%.

Group of orthologs #1052. Best score 418 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 D.pseudoobscura:215

F7B3K0              	100.00%		Q29KN8              	100.00%
Bootstrap support for F7B3K0 as seed ortholog is 100%.
Bootstrap support for Q29KN8 as seed ortholog is 100%.

Group of orthologs #1053. Best score 417 bits
Score difference with first non-orthologous sequence - C.intestinalis:417 D.pseudoobscura:417

F6ZYI6              	100.00%		Q2M0I6              	100.00%
Bootstrap support for F6ZYI6 as seed ortholog is 100%.
Bootstrap support for Q2M0I6 as seed ortholog is 100%.

Group of orthologs #1054. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 D.pseudoobscura:216

F7AMH7              	100.00%		B5E1I7              	100.00%
                    	       		Q2LZQ6              	55.45%
Bootstrap support for F7AMH7 as seed ortholog is 99%.
Bootstrap support for B5E1I7 as seed ortholog is 100%.

Group of orthologs #1055. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 D.pseudoobscura:416

F6UP49              	100.00%		B5DPH9              	100.00%
Bootstrap support for F6UP49 as seed ortholog is 100%.
Bootstrap support for B5DPH9 as seed ortholog is 100%.

Group of orthologs #1056. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 D.pseudoobscura:355

F6VWV8              	100.00%		B5DZT7              	100.00%
Bootstrap support for F6VWV8 as seed ortholog is 99%.
Bootstrap support for B5DZT7 as seed ortholog is 100%.

Group of orthologs #1057. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 D.pseudoobscura:416

F7BMR9              	100.00%		B5DWF3              	100.00%
Bootstrap support for F7BMR9 as seed ortholog is 100%.
Bootstrap support for B5DWF3 as seed ortholog is 100%.

Group of orthologs #1058. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 D.pseudoobscura:416

F6W318              	100.00%		Q29F06              	100.00%
Bootstrap support for F6W318 as seed ortholog is 100%.
Bootstrap support for Q29F06 as seed ortholog is 100%.

Group of orthologs #1059. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 D.pseudoobscura:416

F6TMR2              	100.00%		Q29LH8              	100.00%
Bootstrap support for F6TMR2 as seed ortholog is 100%.
Bootstrap support for Q29LH8 as seed ortholog is 100%.

Group of orthologs #1060. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:416 D.pseudoobscura:416

Q4H3S6              	100.00%		Q29EE0              	100.00%
Bootstrap support for Q4H3S6 as seed ortholog is 100%.
Bootstrap support for Q29EE0 as seed ortholog is 100%.

Group of orthologs #1061. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 D.pseudoobscura:329

Q4H383              	100.00%		Q29IC0              	100.00%
Bootstrap support for Q4H383 as seed ortholog is 100%.
Bootstrap support for Q29IC0 as seed ortholog is 100%.

Group of orthologs #1062. Best score 416 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 D.pseudoobscura:317

Q1RLF0              	100.00%		Q29LI9              	100.00%
Bootstrap support for Q1RLF0 as seed ortholog is 100%.
Bootstrap support for Q29LI9 as seed ortholog is 100%.

Group of orthologs #1063. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 D.pseudoobscura:86

H2Y0H5              	100.00%		Q292G7              	100.00%
F6V8V5              	17.11%		Q291K6              	13.94%
Bootstrap support for H2Y0H5 as seed ortholog is 100%.
Bootstrap support for Q292G7 as seed ortholog is 99%.

Group of orthologs #1064. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 D.pseudoobscura:194

F6TXF8              	100.00%		Q29JV6              	100.00%
H2XZS4              	9.55%		
Bootstrap support for F6TXF8 as seed ortholog is 69%.
Alternative seed ortholog is F6TIF0 (28 bits away from this cluster)
Bootstrap support for Q29JV6 as seed ortholog is 99%.

Group of orthologs #1065. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 D.pseudoobscura:415

F6UAZ6              	100.00%		B5DK31              	100.00%
Bootstrap support for F6UAZ6 as seed ortholog is 100%.
Bootstrap support for B5DK31 as seed ortholog is 100%.

Group of orthologs #1066. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 D.pseudoobscura:415

F6QHG7              	100.00%		Q29BR8              	100.00%
Bootstrap support for F6QHG7 as seed ortholog is 100%.
Bootstrap support for Q29BR8 as seed ortholog is 100%.

Group of orthologs #1067. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 D.pseudoobscura:415

F6WNN3              	100.00%		Q293K2              	100.00%
Bootstrap support for F6WNN3 as seed ortholog is 100%.
Bootstrap support for Q293K2 as seed ortholog is 100%.

Group of orthologs #1068. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 D.pseudoobscura:415

F6UHR3              	100.00%		Q29D14              	100.00%
Bootstrap support for F6UHR3 as seed ortholog is 100%.
Bootstrap support for Q29D14 as seed ortholog is 100%.

Group of orthologs #1069. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 D.pseudoobscura:415

F6ZXH6              	100.00%		Q290N8              	100.00%
Bootstrap support for F6ZXH6 as seed ortholog is 100%.
Bootstrap support for Q290N8 as seed ortholog is 100%.

Group of orthologs #1070. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 D.pseudoobscura:415

F6YV51              	100.00%		Q29JW1              	100.00%
Bootstrap support for F6YV51 as seed ortholog is 100%.
Bootstrap support for Q29JW1 as seed ortholog is 100%.

Group of orthologs #1071. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:415 D.pseudoobscura:361

F7ALM5              	100.00%		Q29K45              	100.00%
Bootstrap support for F7ALM5 as seed ortholog is 100%.
Bootstrap support for Q29K45 as seed ortholog is 100%.

Group of orthologs #1072. Best score 415 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 D.pseudoobscura:415

H2Y2G2              	100.00%		Q29JL3              	100.00%
Bootstrap support for H2Y2G2 as seed ortholog is 100%.
Bootstrap support for Q29JL3 as seed ortholog is 100%.

Group of orthologs #1073. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 D.pseudoobscura:414

F6RK88              	100.00%		Q296K7              	100.00%
Bootstrap support for F6RK88 as seed ortholog is 100%.
Bootstrap support for Q296K7 as seed ortholog is 100%.

Group of orthologs #1074. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 D.pseudoobscura:414

F6XMP8              	100.00%		Q290N0              	100.00%
Bootstrap support for F6XMP8 as seed ortholog is 100%.
Bootstrap support for Q290N0 as seed ortholog is 100%.

Group of orthologs #1075. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:414 D.pseudoobscura:414

F6YGD1              	100.00%		Q29F46              	100.00%
Bootstrap support for F6YGD1 as seed ortholog is 100%.
Bootstrap support for Q29F46 as seed ortholog is 100%.

Group of orthologs #1076. Best score 414 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 D.pseudoobscura:130

H2Y2I8              	100.00%		Q29NB7              	100.00%
Bootstrap support for H2Y2I8 as seed ortholog is 99%.
Bootstrap support for Q29NB7 as seed ortholog is 99%.

Group of orthologs #1077. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:99

F6WPA1              	100.00%		B5DLT3              	100.00%
H2XNZ6              	30.73%		
Bootstrap support for F6WPA1 as seed ortholog is 99%.
Bootstrap support for B5DLT3 as seed ortholog is 97%.

Group of orthologs #1078. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 D.pseudoobscura:413

F6TJB5              	100.00%		Q29FE1              	100.00%
Bootstrap support for F6TJB5 as seed ortholog is 100%.
Bootstrap support for Q29FE1 as seed ortholog is 100%.

Group of orthologs #1079. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 D.pseudoobscura:413

F6SZY0              	100.00%		Q29MS6              	100.00%
Bootstrap support for F6SZY0 as seed ortholog is 100%.
Bootstrap support for Q29MS6 as seed ortholog is 100%.

Group of orthologs #1080. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 D.pseudoobscura:413

F6U1E2              	100.00%		Q29KG2              	100.00%
Bootstrap support for F6U1E2 as seed ortholog is 100%.
Bootstrap support for Q29KG2 as seed ortholog is 100%.

Group of orthologs #1081. Best score 413 bits
Score difference with first non-orthologous sequence - C.intestinalis:413 D.pseudoobscura:413

F7AEV2              	100.00%		Q29KS9              	100.00%
Bootstrap support for F7AEV2 as seed ortholog is 100%.
Bootstrap support for Q29KS9 as seed ortholog is 100%.

Group of orthologs #1082. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 D.pseudoobscura:197

F6WQS9              	100.00%		B5DWV2              	100.00%
                    	       		B5DM64              	31.52%
                    	       		Q297E0              	26.86%
                    	       		Q297D9              	26.46%
Bootstrap support for F6WQS9 as seed ortholog is 93%.
Bootstrap support for B5DWV2 as seed ortholog is 100%.

Group of orthologs #1083. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 D.pseudoobscura:412

F6XUD5              	100.00%		Q28Z52              	100.00%
F6V9F0              	22.00%		
Bootstrap support for F6XUD5 as seed ortholog is 100%.
Bootstrap support for Q28Z52 as seed ortholog is 100%.

Group of orthologs #1084. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 D.pseudoobscura:412

F6XP34              	100.00%		Q28XG3              	100.00%
Bootstrap support for F6XP34 as seed ortholog is 100%.
Bootstrap support for Q28XG3 as seed ortholog is 100%.

Group of orthologs #1085. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 D.pseudoobscura:412

F6WH82              	100.00%		Q29BY2              	100.00%
Bootstrap support for F6WH82 as seed ortholog is 100%.
Bootstrap support for Q29BY2 as seed ortholog is 100%.

Group of orthologs #1086. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:412 D.pseudoobscura:412

F6SLD6              	100.00%		Q29L51              	100.00%
Bootstrap support for F6SLD6 as seed ortholog is 100%.
Bootstrap support for Q29L51 as seed ortholog is 100%.

Group of orthologs #1087. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 D.pseudoobscura:355

F6TIU3              	100.00%		Q29L19              	100.00%
Bootstrap support for F6TIU3 as seed ortholog is 100%.
Bootstrap support for Q29L19 as seed ortholog is 100%.

Group of orthologs #1088. Best score 412 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 D.pseudoobscura:324

F7A6C5              	100.00%		Q2M104              	100.00%
Bootstrap support for F7A6C5 as seed ortholog is 100%.
Bootstrap support for Q2M104 as seed ortholog is 100%.

Group of orthologs #1089. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 D.pseudoobscura:68

F6V6J6              	100.00%		Q29IS1              	100.00%
                    	       		Q29IS8              	42.66%
                    	       		B5DLA1              	34.27%
                    	       		Q29IS7              	31.82%
                    	       		Q297A4              	15.85%
                    	       		Q29IS3              	10.37%
                    	       		P18172              	9.21%
                    	       		Q29IT0              	6.53%
                    	       		Q29IS9              	5.13%
Bootstrap support for F6V6J6 as seed ortholog is 98%.
Bootstrap support for Q29IS1 as seed ortholog is 91%.

Group of orthologs #1090. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 D.pseudoobscura:411

F7AQQ6              	100.00%		Q29LV1              	100.00%
F6QUA3              	13.35%		
Bootstrap support for F7AQQ6 as seed ortholog is 88%.
Bootstrap support for Q29LV1 as seed ortholog is 100%.

Group of orthologs #1091. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 D.pseudoobscura:411

F6WWW4              	100.00%		Q28XA8              	100.00%
Bootstrap support for F6WWW4 as seed ortholog is 100%.
Bootstrap support for Q28XA8 as seed ortholog is 100%.

Group of orthologs #1092. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 D.pseudoobscura:411

F6THY1              	100.00%		Q299B7              	100.00%
Bootstrap support for F6THY1 as seed ortholog is 100%.
Bootstrap support for Q299B7 as seed ortholog is 100%.

Group of orthologs #1093. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 D.pseudoobscura:321

F6ZFE0              	100.00%		Q28XH6              	100.00%
Bootstrap support for F6ZFE0 as seed ortholog is 100%.
Bootstrap support for Q28XH6 as seed ortholog is 100%.

Group of orthologs #1094. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 D.pseudoobscura:411

F6ZIT4              	100.00%		Q297L2              	100.00%
Bootstrap support for F6ZIT4 as seed ortholog is 100%.
Bootstrap support for Q297L2 as seed ortholog is 100%.

Group of orthologs #1095. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 D.pseudoobscura:411

H2XVI6              	100.00%		Q29CH3              	100.00%
Bootstrap support for H2XVI6 as seed ortholog is 100%.
Bootstrap support for Q29CH3 as seed ortholog is 100%.

Group of orthologs #1096. Best score 411 bits
Score difference with first non-orthologous sequence - C.intestinalis:411 D.pseudoobscura:411

F7BDE0              	100.00%		Q2M0V0              	100.00%
Bootstrap support for F7BDE0 as seed ortholog is 100%.
Bootstrap support for Q2M0V0 as seed ortholog is 100%.

Group of orthologs #1097. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 D.pseudoobscura:410

F7ACM5              	100.00%		B5DHX4              	100.00%
Bootstrap support for F7ACM5 as seed ortholog is 100%.
Bootstrap support for B5DHX4 as seed ortholog is 100%.

Group of orthologs #1098. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 D.pseudoobscura:410

F6TUU8              	100.00%		Q28ZN5              	100.00%
Bootstrap support for F6TUU8 as seed ortholog is 100%.
Bootstrap support for Q28ZN5 as seed ortholog is 100%.

Group of orthologs #1099. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 D.pseudoobscura:84

F6YRS8              	100.00%		Q29GE2              	100.00%
Bootstrap support for F6YRS8 as seed ortholog is 100%.
Bootstrap support for Q29GE2 as seed ortholog is 99%.

Group of orthologs #1100. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 D.pseudoobscura:410

F6ZGD4              	100.00%		Q29J17              	100.00%
Bootstrap support for F6ZGD4 as seed ortholog is 100%.
Bootstrap support for Q29J17 as seed ortholog is 100%.

Group of orthologs #1101. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 D.pseudoobscura:410

H2XRU0              	100.00%		Q297L0              	100.00%
Bootstrap support for H2XRU0 as seed ortholog is 100%.
Bootstrap support for Q297L0 as seed ortholog is 100%.

Group of orthologs #1102. Best score 410 bits
Score difference with first non-orthologous sequence - C.intestinalis:410 D.pseudoobscura:410

H2XPJ9              	100.00%		Q29NU5              	100.00%
Bootstrap support for H2XPJ9 as seed ortholog is 100%.
Bootstrap support for Q29NU5 as seed ortholog is 100%.

Group of orthologs #1103. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 D.pseudoobscura:409

F6SXW5              	100.00%		Q29HW3              	100.00%
Bootstrap support for F6SXW5 as seed ortholog is 100%.
Bootstrap support for Q29HW3 as seed ortholog is 100%.

Group of orthologs #1104. Best score 409 bits
Score difference with first non-orthologous sequence - C.intestinalis:409 D.pseudoobscura:409

H2XT76              	100.00%		Q28ZB2              	100.00%
Bootstrap support for H2XT76 as seed ortholog is 100%.
Bootstrap support for Q28ZB2 as seed ortholog is 100%.

Group of orthologs #1105. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 D.pseudoobscura:91

F7ARF4              	100.00%		Q29CC5              	100.00%
F6RS86              	49.34%		
Bootstrap support for F7ARF4 as seed ortholog is 99%.
Bootstrap support for Q29CC5 as seed ortholog is 97%.

Group of orthologs #1106. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 D.pseudoobscura:408

F6Q096              	100.00%		Q29FA8              	100.00%
Bootstrap support for F6Q096 as seed ortholog is 100%.
Bootstrap support for Q29FA8 as seed ortholog is 100%.

Group of orthologs #1107. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 D.pseudoobscura:315

F6VEB2              	100.00%		Q292E8              	100.00%
Bootstrap support for F6VEB2 as seed ortholog is 100%.
Bootstrap support for Q292E8 as seed ortholog is 100%.

Group of orthologs #1108. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:408 D.pseudoobscura:408

F6V6M0              	100.00%		Q29DW0              	100.00%
Bootstrap support for F6V6M0 as seed ortholog is 100%.
Bootstrap support for Q29DW0 as seed ortholog is 100%.

Group of orthologs #1109. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 D.pseudoobscura:408

F6R5G5              	100.00%		Q2LYK0              	100.00%
Bootstrap support for F6R5G5 as seed ortholog is 100%.
Bootstrap support for Q2LYK0 as seed ortholog is 100%.

Group of orthologs #1110. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 D.pseudoobscura:252

F6Z9D3              	100.00%		Q29CP9              	100.00%
Bootstrap support for F6Z9D3 as seed ortholog is 99%.
Bootstrap support for Q29CP9 as seed ortholog is 100%.

Group of orthologs #1111. Best score 408 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 D.pseudoobscura:408

F6ZXD5              	100.00%		Q29D55              	100.00%
Bootstrap support for F6ZXD5 as seed ortholog is 99%.
Bootstrap support for Q29D55 as seed ortholog is 100%.

Group of orthologs #1112. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 D.pseudoobscura:246

H2Y1C4              	100.00%		Q290T2              	100.00%
                    	       		B5DWU6              	7.77%
                    	       		B5DWX7              	7.33%
Bootstrap support for H2Y1C4 as seed ortholog is 100%.
Bootstrap support for Q290T2 as seed ortholog is 99%.

Group of orthologs #1113. Best score 407 bits
Score difference with first non-orthologous sequence - C.intestinalis:407 D.pseudoobscura:407

F6XUX1              	100.00%		Q29IR8              	100.00%
Bootstrap support for F6XUX1 as seed ortholog is 100%.
Bootstrap support for Q29IR8 as seed ortholog is 100%.

Group of orthologs #1114. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 D.pseudoobscura:89

F6SCN2              	100.00%		Q293U0              	100.00%
Bootstrap support for F6SCN2 as seed ortholog is 100%.
Bootstrap support for Q293U0 as seed ortholog is 99%.

Group of orthologs #1115. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 D.pseudoobscura:406

F6UCU4              	100.00%		Q29DC8              	100.00%
Bootstrap support for F6UCU4 as seed ortholog is 100%.
Bootstrap support for Q29DC8 as seed ortholog is 100%.

Group of orthologs #1116. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 D.pseudoobscura:406

F6R6C4              	100.00%		Q29LY9              	100.00%
Bootstrap support for F6R6C4 as seed ortholog is 100%.
Bootstrap support for Q29LY9 as seed ortholog is 100%.

Group of orthologs #1117. Best score 406 bits
Score difference with first non-orthologous sequence - C.intestinalis:406 D.pseudoobscura:406

H2Y1I4              	100.00%		Q2LZ09              	100.00%
Bootstrap support for H2Y1I4 as seed ortholog is 100%.
Bootstrap support for Q2LZ09 as seed ortholog is 100%.

Group of orthologs #1118. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 D.pseudoobscura:335

F6URQ9              	100.00%		I7LZD1              	100.00%
Bootstrap support for F6URQ9 as seed ortholog is 100%.
Bootstrap support for I7LZD1 as seed ortholog is 100%.

Group of orthologs #1119. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 D.pseudoobscura:205

F6ZRR5              	100.00%		B5DQ82              	100.00%
Bootstrap support for F6ZRR5 as seed ortholog is 100%.
Bootstrap support for B5DQ82 as seed ortholog is 100%.

Group of orthologs #1120. Best score 405 bits
Score difference with first non-orthologous sequence - C.intestinalis:405 D.pseudoobscura:405

H2XTB6              	100.00%		I7M5V8              	100.00%
Bootstrap support for H2XTB6 as seed ortholog is 100%.
Bootstrap support for I7M5V8 as seed ortholog is 100%.

Group of orthologs #1121. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 D.pseudoobscura:341

F6XXW0              	100.00%		Q297N4              	100.00%
Bootstrap support for F6XXW0 as seed ortholog is 100%.
Bootstrap support for Q297N4 as seed ortholog is 100%.

Group of orthologs #1122. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 D.pseudoobscura:404

F6W6K9              	100.00%		Q29F41              	100.00%
Bootstrap support for F6W6K9 as seed ortholog is 100%.
Bootstrap support for Q29F41 as seed ortholog is 100%.

Group of orthologs #1123. Best score 404 bits
Score difference with first non-orthologous sequence - C.intestinalis:404 D.pseudoobscura:404

H2XXY3              	100.00%		Q29NK1              	100.00%
Bootstrap support for H2XXY3 as seed ortholog is 100%.
Bootstrap support for Q29NK1 as seed ortholog is 100%.

Group of orthologs #1124. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 D.pseudoobscura:215

F6R6J0              	100.00%		Q29NJ3              	100.00%
                    	       		B5DLE5              	14.21%
Bootstrap support for F6R6J0 as seed ortholog is 100%.
Bootstrap support for Q29NJ3 as seed ortholog is 100%.

Group of orthologs #1125. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:403 D.pseudoobscura:198

F7AB24              	100.00%		Q28XA0              	100.00%
Bootstrap support for F7AB24 as seed ortholog is 100%.
Bootstrap support for Q28XA0 as seed ortholog is 100%.

Group of orthologs #1126. Best score 403 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 D.pseudoobscura:14

F7ANS1              	100.00%		Q29H64              	100.00%
Bootstrap support for F7ANS1 as seed ortholog is 97%.
Bootstrap support for Q29H64 as seed ortholog is 63%.
Alternative seed ortholog is Q298B7 (14 bits away from this cluster)

Group of orthologs #1127. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:402 D.pseudoobscura:336

F6RA65              	100.00%		Q296M0              	100.00%
Bootstrap support for F6RA65 as seed ortholog is 100%.
Bootstrap support for Q296M0 as seed ortholog is 100%.

Group of orthologs #1128. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:402 D.pseudoobscura:180

F6X4N7              	100.00%		B5DYB4              	100.00%
Bootstrap support for F6X4N7 as seed ortholog is 100%.
Bootstrap support for B5DYB4 as seed ortholog is 100%.

Group of orthologs #1129. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 D.pseudoobscura:402

H2XNI1              	100.00%		B5DK44              	100.00%
Bootstrap support for H2XNI1 as seed ortholog is 99%.
Bootstrap support for B5DK44 as seed ortholog is 100%.

Group of orthologs #1130. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 D.pseudoobscura:402

F6RB18              	100.00%		Q29I26              	100.00%
Bootstrap support for F6RB18 as seed ortholog is 100%.
Bootstrap support for Q29I26 as seed ortholog is 100%.

Group of orthologs #1131. Best score 402 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 D.pseudoobscura:402

H2XYI9              	100.00%		Q659W7              	100.00%
Bootstrap support for H2XYI9 as seed ortholog is 99%.
Bootstrap support for Q659W7 as seed ortholog is 100%.

Group of orthologs #1132. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 D.pseudoobscura:401

F6QSJ0              	100.00%		B5DVK2              	100.00%
Bootstrap support for F6QSJ0 as seed ortholog is 100%.
Bootstrap support for B5DVK2 as seed ortholog is 100%.

Group of orthologs #1133. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 D.pseudoobscura:401

F6YHS8              	100.00%		Q297K5              	100.00%
Bootstrap support for F6YHS8 as seed ortholog is 100%.
Bootstrap support for Q297K5 as seed ortholog is 100%.

Group of orthologs #1134. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 D.pseudoobscura:401

F7ASJ4              	100.00%		Q2M0D4              	100.00%
Bootstrap support for F7ASJ4 as seed ortholog is 100%.
Bootstrap support for Q2M0D4 as seed ortholog is 100%.

Group of orthologs #1135. Best score 401 bits
Score difference with first non-orthologous sequence - C.intestinalis:401 D.pseudoobscura:288

Q68A31              	100.00%		Q29N52              	100.00%
Bootstrap support for Q68A31 as seed ortholog is 100%.
Bootstrap support for Q29N52 as seed ortholog is 100%.

Group of orthologs #1136. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 D.pseudoobscura:272

F6SKP5              	100.00%		Q28XI8              	100.00%
Bootstrap support for F6SKP5 as seed ortholog is 100%.
Bootstrap support for Q28XI8 as seed ortholog is 100%.

Group of orthologs #1137. Best score 400 bits
Score difference with first non-orthologous sequence - C.intestinalis:400 D.pseudoobscura:400

H2XW54              	100.00%		B5DL48              	100.00%
Bootstrap support for H2XW54 as seed ortholog is 100%.
Bootstrap support for B5DL48 as seed ortholog is 100%.

Group of orthologs #1138. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 D.pseudoobscura:399

F6U688              	100.00%		B5DSC8              	100.00%
Bootstrap support for F6U688 as seed ortholog is 100%.
Bootstrap support for B5DSC8 as seed ortholog is 100%.

Group of orthologs #1139. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 D.pseudoobscura:399

F6UIA2              	100.00%		B5DZN7              	100.00%
Bootstrap support for F6UIA2 as seed ortholog is 100%.
Bootstrap support for B5DZN7 as seed ortholog is 100%.

Group of orthologs #1140. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 D.pseudoobscura:173

F6VNW9              	100.00%		Q29A36              	100.00%
Bootstrap support for F6VNW9 as seed ortholog is 100%.
Bootstrap support for Q29A36 as seed ortholog is 99%.

Group of orthologs #1141. Best score 399 bits
Score difference with first non-orthologous sequence - C.intestinalis:399 D.pseudoobscura:399

F7BJM0              	100.00%		Q29J73              	100.00%
Bootstrap support for F7BJM0 as seed ortholog is 100%.
Bootstrap support for Q29J73 as seed ortholog is 100%.

Group of orthologs #1142. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 D.pseudoobscura:398

H2XSQ5              	100.00%		Q28Y51              	100.00%
                    	       		Q28ZM3              	28.08%
Bootstrap support for H2XSQ5 as seed ortholog is 100%.
Bootstrap support for Q28Y51 as seed ortholog is 100%.

Group of orthologs #1143. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 D.pseudoobscura:398

F6T283              	100.00%		B5DVU9              	100.00%
Bootstrap support for F6T283 as seed ortholog is 100%.
Bootstrap support for B5DVU9 as seed ortholog is 100%.

Group of orthologs #1144. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 D.pseudoobscura:398

F6SSW4              	100.00%		B5DXU6              	100.00%
Bootstrap support for F6SSW4 as seed ortholog is 100%.
Bootstrap support for B5DXU6 as seed ortholog is 100%.

Group of orthologs #1145. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 D.pseudoobscura:272

F6SDQ3              	100.00%		Q28ZC3              	100.00%
Bootstrap support for F6SDQ3 as seed ortholog is 100%.
Bootstrap support for Q28ZC3 as seed ortholog is 100%.

Group of orthologs #1146. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 D.pseudoobscura:309

F6ZFW2              	100.00%		Q29H80              	100.00%
Bootstrap support for F6ZFW2 as seed ortholog is 100%.
Bootstrap support for Q29H80 as seed ortholog is 100%.

Group of orthologs #1147. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 D.pseudoobscura:280

L7N0S3              	100.00%		Q296K3              	100.00%
Bootstrap support for L7N0S3 as seed ortholog is 100%.
Bootstrap support for Q296K3 as seed ortholog is 100%.

Group of orthologs #1148. Best score 398 bits
Score difference with first non-orthologous sequence - C.intestinalis:398 D.pseudoobscura:398

H2Y3F6              	100.00%		Q2LYM7              	100.00%
Bootstrap support for H2Y3F6 as seed ortholog is 100%.
Bootstrap support for Q2LYM7 as seed ortholog is 100%.

Group of orthologs #1149. Best score 397 bits
Score difference with first non-orthologous sequence - C.intestinalis:397 D.pseudoobscura:397

H2Y2K2              	100.00%		Q29LW1              	100.00%
Bootstrap support for H2Y2K2 as seed ortholog is 100%.
Bootstrap support for Q29LW1 as seed ortholog is 100%.

Group of orthologs #1150. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 D.pseudoobscura:52

F6YLJ0              	100.00%		I5AMP7              	100.00%
F6VIM5              	28.11%		B5E1B1              	35.10%
F7AX01              	19.21%		
F6TN12              	15.40%		
F6V693              	5.51%		
Bootstrap support for F6YLJ0 as seed ortholog is 99%.
Bootstrap support for I5AMP7 as seed ortholog is 85%.

Group of orthologs #1151. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 D.pseudoobscura:396

F6U254              	100.00%		B5DJ67              	100.00%
Bootstrap support for F6U254 as seed ortholog is 100%.
Bootstrap support for B5DJ67 as seed ortholog is 100%.

Group of orthologs #1152. Best score 396 bits
Score difference with first non-orthologous sequence - C.intestinalis:396 D.pseudoobscura:396

F6U144              	100.00%		Q29DN7              	100.00%
Bootstrap support for F6U144 as seed ortholog is 100%.
Bootstrap support for Q29DN7 as seed ortholog is 100%.

Group of orthologs #1153. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 D.pseudoobscura:395

H2Y1W6              	100.00%		B5E0R3              	100.00%
                    	       		Q290E6              	36.09%
                    	       		Q290E4              	31.58%
                    	       		Q290E0              	28.77%
                    	       		B5E0R6              	28.62%
                    	       		Q290D9              	27.22%
                    	       		Q290E5              	26.04%
                    	       		B5E0R5              	25.15%
                    	       		Q290D8              	25.00%
                    	       		Q290E2              	21.82%
                    	       		Q290E3              	20.64%
                    	       		B5E0R4              	17.31%
Bootstrap support for H2Y1W6 as seed ortholog is 100%.
Bootstrap support for B5E0R3 as seed ortholog is 100%.

Group of orthologs #1154. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 D.pseudoobscura:395

F6SGZ6              	100.00%		Q29M42              	100.00%
Bootstrap support for F6SGZ6 as seed ortholog is 100%.
Bootstrap support for Q29M42 as seed ortholog is 100%.

Group of orthologs #1155. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 D.pseudoobscura:395

F6YT91              	100.00%		Q296V2              	100.00%
Bootstrap support for F6YT91 as seed ortholog is 100%.
Bootstrap support for Q296V2 as seed ortholog is 100%.

Group of orthologs #1156. Best score 395 bits
Score difference with first non-orthologous sequence - C.intestinalis:395 D.pseudoobscura:395

F6WJQ9              	100.00%		Q29E37              	100.00%
Bootstrap support for F6WJQ9 as seed ortholog is 100%.
Bootstrap support for Q29E37 as seed ortholog is 100%.

Group of orthologs #1157. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 D.pseudoobscura:394

F6RMT1              	100.00%		Q291K0              	100.00%
Bootstrap support for F6RMT1 as seed ortholog is 100%.
Bootstrap support for Q291K0 as seed ortholog is 100%.

Group of orthologs #1158. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 D.pseudoobscura:394

F6YIY8              	100.00%		Q29I23              	100.00%
Bootstrap support for F6YIY8 as seed ortholog is 100%.
Bootstrap support for Q29I23 as seed ortholog is 100%.

Group of orthologs #1159. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 D.pseudoobscura:394

Q8HIN5              	100.00%		D2SXZ8              	100.00%
Bootstrap support for Q8HIN5 as seed ortholog is 100%.
Bootstrap support for D2SXZ8 as seed ortholog is 100%.

Group of orthologs #1160. Best score 394 bits
Score difference with first non-orthologous sequence - C.intestinalis:394 D.pseudoobscura:394

H2XNB1              	100.00%		Q2LZX2              	100.00%
Bootstrap support for H2XNB1 as seed ortholog is 100%.
Bootstrap support for Q2LZX2 as seed ortholog is 100%.

Group of orthologs #1161. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 D.pseudoobscura:228

F6ZNF4              	100.00%		Q29KA5              	100.00%
                    	       		Q29ND1              	23.10%
Bootstrap support for F6ZNF4 as seed ortholog is 98%.
Bootstrap support for Q29KA5 as seed ortholog is 100%.

Group of orthologs #1162. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 D.pseudoobscura:210

F6WVT9              	100.00%		B5DR97              	100.00%
Bootstrap support for F6WVT9 as seed ortholog is 100%.
Bootstrap support for B5DR97 as seed ortholog is 99%.

Group of orthologs #1163. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 D.pseudoobscura:393

F6YEH2              	100.00%		B5E0S5              	100.00%
Bootstrap support for F6YEH2 as seed ortholog is 100%.
Bootstrap support for B5E0S5 as seed ortholog is 100%.

Group of orthologs #1164. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:393 D.pseudoobscura:134

H2XSL3              	100.00%		B5DKT1              	100.00%
Bootstrap support for H2XSL3 as seed ortholog is 100%.
Bootstrap support for B5DKT1 as seed ortholog is 96%.

Group of orthologs #1165. Best score 393 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 D.pseudoobscura:109

F6YG27              	100.00%		Q29FJ3              	100.00%
Bootstrap support for F6YG27 as seed ortholog is 100%.
Bootstrap support for Q29FJ3 as seed ortholog is 99%.

Group of orthologs #1166. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 D.pseudoobscura:392

F6VCG5              	100.00%		Q299F9              	100.00%
Bootstrap support for F6VCG5 as seed ortholog is 100%.
Bootstrap support for Q299F9 as seed ortholog is 100%.

Group of orthologs #1167. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 D.pseudoobscura:56

F6UB18              	100.00%		Q29DP1              	100.00%
Bootstrap support for F6UB18 as seed ortholog is 98%.
Bootstrap support for Q29DP1 as seed ortholog is 94%.

Group of orthologs #1168. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 D.pseudoobscura:248

F6SZ94              	100.00%		Q29MX0              	100.00%
Bootstrap support for F6SZ94 as seed ortholog is 99%.
Bootstrap support for Q29MX0 as seed ortholog is 100%.

Group of orthologs #1169. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 D.pseudoobscura:392

F6REI3              	100.00%		Q2M0S5              	100.00%
Bootstrap support for F6REI3 as seed ortholog is 100%.
Bootstrap support for Q2M0S5 as seed ortholog is 100%.

Group of orthologs #1170. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:392 D.pseudoobscura:64

F6ZYJ2              	100.00%		Q29IP8              	100.00%
Bootstrap support for F6ZYJ2 as seed ortholog is 100%.
Bootstrap support for Q29IP8 as seed ortholog is 92%.

Group of orthologs #1171. Best score 392 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 D.pseudoobscura:392

Q4H352              	100.00%		Q29B25              	100.00%
Bootstrap support for Q4H352 as seed ortholog is 100%.
Bootstrap support for Q29B25 as seed ortholog is 100%.

Group of orthologs #1172. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 D.pseudoobscura:391

F6W2G3              	100.00%		Q29DV7              	100.00%
F6V176              	38.81%		
Bootstrap support for F6W2G3 as seed ortholog is 59%.
Alternative seed ortholog is F6S9Y0 (8 bits away from this cluster)
Bootstrap support for Q29DV7 as seed ortholog is 100%.

Group of orthologs #1173. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 D.pseudoobscura:391

F6TQT4              	100.00%		Q28YW2              	100.00%
Bootstrap support for F6TQT4 as seed ortholog is 100%.
Bootstrap support for Q28YW2 as seed ortholog is 100%.

Group of orthologs #1174. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 D.pseudoobscura:391

F6WPV3              	100.00%		Q290B6              	100.00%
Bootstrap support for F6WPV3 as seed ortholog is 100%.
Bootstrap support for Q290B6 as seed ortholog is 100%.

Group of orthologs #1175. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 D.pseudoobscura:391

F6PMY2              	100.00%		Q29JW6              	100.00%
Bootstrap support for F6PMY2 as seed ortholog is 100%.
Bootstrap support for Q29JW6 as seed ortholog is 100%.

Group of orthologs #1176. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 D.pseudoobscura:391

F6PPP3              	100.00%		Q29ME9              	100.00%
Bootstrap support for F6PPP3 as seed ortholog is 100%.
Bootstrap support for Q29ME9 as seed ortholog is 100%.

Group of orthologs #1177. Best score 391 bits
Score difference with first non-orthologous sequence - C.intestinalis:391 D.pseudoobscura:391

F6SHZ7              	100.00%		Q29MS7              	100.00%
Bootstrap support for F6SHZ7 as seed ortholog is 100%.
Bootstrap support for Q29MS7 as seed ortholog is 100%.

Group of orthologs #1178. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 D.pseudoobscura:390

F7A1S8              	100.00%		Q29PG5              	100.00%
                    	       		B5DS72              	99.81%
Bootstrap support for F7A1S8 as seed ortholog is 100%.
Bootstrap support for Q29PG5 as seed ortholog is 100%.

Group of orthologs #1179. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:281

F6PW34              	100.00%		Q29N00              	100.00%
Bootstrap support for F6PW34 as seed ortholog is 100%.
Bootstrap support for Q29N00 as seed ortholog is 100%.

Group of orthologs #1180. Best score 390 bits
Score difference with first non-orthologous sequence - C.intestinalis:390 D.pseudoobscura:390

F7B658              	100.00%		Q29A77              	100.00%
Bootstrap support for F7B658 as seed ortholog is 100%.
Bootstrap support for Q29A77 as seed ortholog is 100%.

Group of orthologs #1181. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 D.pseudoobscura:389

F6VFC5              	100.00%		B5DX31              	100.00%
Bootstrap support for F6VFC5 as seed ortholog is 100%.
Bootstrap support for B5DX31 as seed ortholog is 100%.

Group of orthologs #1182. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 D.pseudoobscura:389

F6XMM6              	100.00%		B5DZ19              	100.00%
Bootstrap support for F6XMM6 as seed ortholog is 100%.
Bootstrap support for B5DZ19 as seed ortholog is 100%.

Group of orthologs #1183. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 D.pseudoobscura:389

F6WFL4              	100.00%		Q29AH1              	100.00%
Bootstrap support for F6WFL4 as seed ortholog is 100%.
Bootstrap support for Q29AH1 as seed ortholog is 100%.

Group of orthologs #1184. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:389 D.pseudoobscura:389

H2XL83              	100.00%		Q29M77              	100.00%
Bootstrap support for H2XL83 as seed ortholog is 100%.
Bootstrap support for Q29M77 as seed ortholog is 100%.

Group of orthologs #1185. Best score 389 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 D.pseudoobscura:341

Q1RPW9              	100.00%		Q29JC0              	100.00%
Bootstrap support for Q1RPW9 as seed ortholog is 100%.
Bootstrap support for Q29JC0 as seed ortholog is 100%.

Group of orthologs #1186. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 D.pseudoobscura:204

F6Y940              	100.00%		B5DV58              	100.00%
                    	       		Q29HM8              	63.28%
                    	       		B5DX15              	45.57%
Bootstrap support for F6Y940 as seed ortholog is 100%.
Bootstrap support for B5DV58 as seed ortholog is 100%.

Group of orthologs #1187. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 D.pseudoobscura:388

F7AER5              	100.00%		Q28ZY1              	100.00%
Bootstrap support for F7AER5 as seed ortholog is 100%.
Bootstrap support for Q28ZY1 as seed ortholog is 100%.

Group of orthologs #1188. Best score 388 bits
Score difference with first non-orthologous sequence - C.intestinalis:388 D.pseudoobscura:274

H2XKS2              	100.00%		Q291L6              	100.00%
Bootstrap support for H2XKS2 as seed ortholog is 100%.
Bootstrap support for Q291L6 as seed ortholog is 100%.

Group of orthologs #1189. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 D.pseudoobscura:387

F6ZU53              	100.00%		Q293E7              	100.00%
Bootstrap support for F6ZU53 as seed ortholog is 100%.
Bootstrap support for Q293E7 as seed ortholog is 100%.

Group of orthologs #1190. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 D.pseudoobscura:293

F6ZCE0              	100.00%		Q295W7              	100.00%
Bootstrap support for F6ZCE0 as seed ortholog is 100%.
Bootstrap support for Q295W7 as seed ortholog is 100%.

Group of orthologs #1191. Best score 387 bits
Score difference with first non-orthologous sequence - C.intestinalis:387 D.pseudoobscura:387

Q1RPZ2              	100.00%		Q2LYX0              	100.00%
Bootstrap support for Q1RPZ2 as seed ortholog is 100%.
Bootstrap support for Q2LYX0 as seed ortholog is 100%.

Group of orthologs #1192. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 D.pseudoobscura:7

F6X7T3              	100.00%		Q29PH0              	100.00%
F6Y178              	31.19%		
F6U1B1              	5.78%		
Bootstrap support for F6X7T3 as seed ortholog is 100%.
Bootstrap support for Q29PH0 as seed ortholog is 60%.
Alternative seed ortholog is Q29LM2 (7 bits away from this cluster)

Group of orthologs #1193. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 D.pseudoobscura:45

F6QMU4              	100.00%		B5DJU0              	100.00%
                    	       		B5DNV4              	6.77%
Bootstrap support for F6QMU4 as seed ortholog is 99%.
Bootstrap support for B5DJU0 as seed ortholog is 80%.

Group of orthologs #1194. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 D.pseudoobscura:308

F6SF69              	100.00%		Q299H0              	100.00%
Bootstrap support for F6SF69 as seed ortholog is 100%.
Bootstrap support for Q299H0 as seed ortholog is 100%.

Group of orthologs #1195. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 D.pseudoobscura:252

F6UTA8              	100.00%		Q29E82              	100.00%
Bootstrap support for F6UTA8 as seed ortholog is 100%.
Bootstrap support for Q29E82 as seed ortholog is 99%.

Group of orthologs #1196. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 D.pseudoobscura:169

F6WVW2              	100.00%		Q29FM1              	100.00%
Bootstrap support for F6WVW2 as seed ortholog is 100%.
Bootstrap support for Q29FM1 as seed ortholog is 98%.

Group of orthologs #1197. Best score 386 bits
Score difference with first non-orthologous sequence - C.intestinalis:386 D.pseudoobscura:386

F6YHB0              	100.00%		Q29NI5              	100.00%
Bootstrap support for F6YHB0 as seed ortholog is 100%.
Bootstrap support for Q29NI5 as seed ortholog is 100%.

Group of orthologs #1198. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:48

F6ZTL3              	100.00%		Q29GA3              	100.00%
F6ZAB8              	22.10%		B5DX93              	28.10%
F7AMK6              	20.33%		I5AP81              	20.12%
                    	       		Q29ML4              	5.28%
Bootstrap support for F6ZTL3 as seed ortholog is 99%.
Bootstrap support for Q29GA3 as seed ortholog is 81%.

Group of orthologs #1199. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 D.pseudoobscura:136

F6VAX6              	100.00%		B5DHW1              	100.00%
                    	       		B5DHX0              	26.34%
Bootstrap support for F6VAX6 as seed ortholog is 100%.
Bootstrap support for B5DHW1 as seed ortholog is 99%.

Group of orthologs #1200. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 D.pseudoobscura:385

F6TFJ1              	100.00%		Q295P7              	100.00%
Bootstrap support for F6TFJ1 as seed ortholog is 100%.
Bootstrap support for Q295P7 as seed ortholog is 100%.

Group of orthologs #1201. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 D.pseudoobscura:385

F6V8N9              	100.00%		Q293Q0              	100.00%
Bootstrap support for F6V8N9 as seed ortholog is 100%.
Bootstrap support for Q293Q0 as seed ortholog is 100%.

Group of orthologs #1202. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 D.pseudoobscura:385

F7B9Q3              	100.00%		Q292E6              	100.00%
Bootstrap support for F7B9Q3 as seed ortholog is 100%.
Bootstrap support for Q292E6 as seed ortholog is 100%.

Group of orthologs #1203. Best score 385 bits
Score difference with first non-orthologous sequence - C.intestinalis:385 D.pseudoobscura:385

F6UD40              	100.00%		Q29PD1              	100.00%
Bootstrap support for F6UD40 as seed ortholog is 100%.
Bootstrap support for Q29PD1 as seed ortholog is 100%.

Group of orthologs #1204. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 D.pseudoobscura:384

F6RRU7              	100.00%		Q28XL6              	100.00%
F6RLA4              	45.66%		
Bootstrap support for F6RRU7 as seed ortholog is 79%.
Bootstrap support for Q28XL6 as seed ortholog is 100%.

Group of orthologs #1205. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 D.pseudoobscura:384

F6SSP8              	100.00%		B5DYE1              	100.00%
Bootstrap support for F6SSP8 as seed ortholog is 100%.
Bootstrap support for B5DYE1 as seed ortholog is 100%.

Group of orthologs #1206. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 D.pseudoobscura:384

F6WYW5              	100.00%		B5E183              	100.00%
Bootstrap support for F6WYW5 as seed ortholog is 79%.
Bootstrap support for B5E183 as seed ortholog is 100%.

Group of orthologs #1207. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 D.pseudoobscura:384

F6R5Z4              	100.00%		Q29G69              	100.00%
Bootstrap support for F6R5Z4 as seed ortholog is 100%.
Bootstrap support for Q29G69 as seed ortholog is 100%.

Group of orthologs #1208. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 D.pseudoobscura:384

F6YTX7              	100.00%		Q28Y69              	100.00%
Bootstrap support for F6YTX7 as seed ortholog is 100%.
Bootstrap support for Q28Y69 as seed ortholog is 100%.

Group of orthologs #1209. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 D.pseudoobscura:384

H2Y0R2              	100.00%		B5DHM4              	100.00%
Bootstrap support for H2Y0R2 as seed ortholog is 100%.
Bootstrap support for B5DHM4 as seed ortholog is 100%.

Group of orthologs #1210. Best score 384 bits
Score difference with first non-orthologous sequence - C.intestinalis:384 D.pseudoobscura:384

F6ZX12              	100.00%		Q292X9              	100.00%
Bootstrap support for F6ZX12 as seed ortholog is 100%.
Bootstrap support for Q292X9 as seed ortholog is 100%.

Group of orthologs #1211. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 D.pseudoobscura:383

F6XXF0              	100.00%		Q28Z21              	100.00%
Bootstrap support for F6XXF0 as seed ortholog is 100%.
Bootstrap support for Q28Z21 as seed ortholog is 100%.

Group of orthologs #1212. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 D.pseudoobscura:205

F7AFR6              	100.00%		B5E1J0              	100.00%
Bootstrap support for F7AFR6 as seed ortholog is 100%.
Bootstrap support for B5E1J0 as seed ortholog is 100%.

Group of orthologs #1213. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 D.pseudoobscura:383

F6WBA4              	100.00%		Q29L48              	100.00%
Bootstrap support for F6WBA4 as seed ortholog is 100%.
Bootstrap support for Q29L48 as seed ortholog is 100%.

Group of orthologs #1214. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 D.pseudoobscura:255

H2XY01              	100.00%		B5DZZ7              	100.00%
Bootstrap support for H2XY01 as seed ortholog is 100%.
Bootstrap support for B5DZZ7 as seed ortholog is 100%.

Group of orthologs #1215. Best score 383 bits
Score difference with first non-orthologous sequence - C.intestinalis:383 D.pseudoobscura:383

Q9NL46              	100.00%		Q29H20              	100.00%
Bootstrap support for Q9NL46 as seed ortholog is 100%.
Bootstrap support for Q29H20 as seed ortholog is 100%.

Group of orthologs #1216. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 D.pseudoobscura:382

F6UQJ9              	100.00%		Q29FS2              	100.00%
Bootstrap support for F6UQJ9 as seed ortholog is 100%.
Bootstrap support for Q29FS2 as seed ortholog is 100%.

Group of orthologs #1217. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 D.pseudoobscura:382

F6YGR5              	100.00%		Q29MM3              	100.00%
Bootstrap support for F6YGR5 as seed ortholog is 100%.
Bootstrap support for Q29MM3 as seed ortholog is 100%.

Group of orthologs #1218. Best score 382 bits
Score difference with first non-orthologous sequence - C.intestinalis:382 D.pseudoobscura:382

H2Y123              	100.00%		Q295K5              	100.00%
Bootstrap support for H2Y123 as seed ortholog is 100%.
Bootstrap support for Q295K5 as seed ortholog is 100%.

Group of orthologs #1219. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 D.pseudoobscura:381

F6ZTX9              	100.00%		Q290H5              	100.00%
Bootstrap support for F6ZTX9 as seed ortholog is 100%.
Bootstrap support for Q290H5 as seed ortholog is 100%.

Group of orthologs #1220. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:381 D.pseudoobscura:299

F6WIL6              	100.00%		Q29HV5              	100.00%
Bootstrap support for F6WIL6 as seed ortholog is 100%.
Bootstrap support for Q29HV5 as seed ortholog is 100%.

Group of orthologs #1221. Best score 381 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 D.pseudoobscura:289

F6X159              	100.00%		Q29IB7              	100.00%
Bootstrap support for F6X159 as seed ortholog is 100%.
Bootstrap support for Q29IB7 as seed ortholog is 100%.

Group of orthologs #1222. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 D.pseudoobscura:380

F6SQQ1              	100.00%		I5APZ0              	100.00%
Bootstrap support for F6SQQ1 as seed ortholog is 100%.
Bootstrap support for I5APZ0 as seed ortholog is 100%.

Group of orthologs #1223. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 D.pseudoobscura:380

F6UJ45              	100.00%		Q29JD2              	100.00%
Bootstrap support for F6UJ45 as seed ortholog is 100%.
Bootstrap support for Q29JD2 as seed ortholog is 100%.

Group of orthologs #1224. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 D.pseudoobscura:380

F6WLN1              	100.00%		Q29M26              	100.00%
Bootstrap support for F6WLN1 as seed ortholog is 100%.
Bootstrap support for Q29M26 as seed ortholog is 100%.

Group of orthologs #1225. Best score 380 bits
Score difference with first non-orthologous sequence - C.intestinalis:380 D.pseudoobscura:380

H2XSN3              	100.00%		Q29JX1              	100.00%
Bootstrap support for H2XSN3 as seed ortholog is 100%.
Bootstrap support for Q29JX1 as seed ortholog is 100%.

Group of orthologs #1226. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 D.pseudoobscura:287

F6XB39              	100.00%		B5DVX7              	100.00%
                    	       		B5DWK7              	22.69%
Bootstrap support for F6XB39 as seed ortholog is 100%.
Bootstrap support for B5DVX7 as seed ortholog is 100%.

Group of orthologs #1227. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 D.pseudoobscura:379

F6Q558              	100.00%		Q2M071              	100.00%
                    	       		B5DI45              	11.82%
Bootstrap support for F6Q558 as seed ortholog is 100%.
Bootstrap support for Q2M071 as seed ortholog is 100%.

Group of orthologs #1228. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 D.pseudoobscura:32

F7A2K6              	100.00%		Q29G10              	100.00%
                    	       		B5DKH3              	31.26%
Bootstrap support for F7A2K6 as seed ortholog is 73%.
Alternative seed ortholog is F6V828 (35 bits away from this cluster)
Bootstrap support for Q29G10 as seed ortholog is 66%.
Alternative seed ortholog is B5DLK4 (32 bits away from this cluster)

Group of orthologs #1229. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 D.pseudoobscura:379

F6SI87              	100.00%		Q295I1              	100.00%
Bootstrap support for F6SI87 as seed ortholog is 100%.
Bootstrap support for Q295I1 as seed ortholog is 100%.

Group of orthologs #1230. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 D.pseudoobscura:379

F6Q0S7              	100.00%		Q2M0P7              	100.00%
Bootstrap support for F6Q0S7 as seed ortholog is 100%.
Bootstrap support for Q2M0P7 as seed ortholog is 100%.

Group of orthologs #1231. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 D.pseudoobscura:379

H2XKE2              	100.00%		Q295Y5              	100.00%
Bootstrap support for H2XKE2 as seed ortholog is 100%.
Bootstrap support for Q295Y5 as seed ortholog is 100%.

Group of orthologs #1232. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 D.pseudoobscura:379

F6ZA03              	100.00%		Q29KQ4              	100.00%
Bootstrap support for F6ZA03 as seed ortholog is 100%.
Bootstrap support for Q29KQ4 as seed ortholog is 100%.

Group of orthologs #1233. Best score 379 bits
Score difference with first non-orthologous sequence - C.intestinalis:379 D.pseudoobscura:379

H2XRS4              	100.00%		Q29MS8              	100.00%
Bootstrap support for H2XRS4 as seed ortholog is 100%.
Bootstrap support for Q29MS8 as seed ortholog is 100%.

Group of orthologs #1234. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 D.pseudoobscura:378

F6VP14              	100.00%		B5DRN7              	100.00%
                    	       		B5DU14              	75.85%
Bootstrap support for F6VP14 as seed ortholog is 100%.
Bootstrap support for B5DRN7 as seed ortholog is 100%.

Group of orthologs #1235. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 D.pseudoobscura:378

F6PW19              	100.00%		Q29MP1              	100.00%
Bootstrap support for F6PW19 as seed ortholog is 100%.
Bootstrap support for Q29MP1 as seed ortholog is 100%.

Group of orthologs #1236. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 D.pseudoobscura:378

F6RU68              	100.00%		Q29MN9              	100.00%
Bootstrap support for F6RU68 as seed ortholog is 100%.
Bootstrap support for Q29MN9 as seed ortholog is 100%.

Group of orthologs #1237. Best score 378 bits
Score difference with first non-orthologous sequence - C.intestinalis:378 D.pseudoobscura:378

F7AM61              	100.00%		Q29MN1              	100.00%
Bootstrap support for F7AM61 as seed ortholog is 100%.
Bootstrap support for Q29MN1 as seed ortholog is 100%.

Group of orthologs #1238. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 D.pseudoobscura:253

F6PTJ9              	100.00%		B5DTH2              	100.00%
Bootstrap support for F6PTJ9 as seed ortholog is 100%.
Bootstrap support for B5DTH2 as seed ortholog is 100%.

Group of orthologs #1239. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 D.pseudoobscura:377

F6QIR4              	100.00%		B5E1E4              	100.00%
Bootstrap support for F6QIR4 as seed ortholog is 100%.
Bootstrap support for B5E1E4 as seed ortholog is 100%.

Group of orthologs #1240. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 D.pseudoobscura:377

F6YDG1              	100.00%		Q290C0              	100.00%
Bootstrap support for F6YDG1 as seed ortholog is 100%.
Bootstrap support for Q290C0 as seed ortholog is 100%.

Group of orthologs #1241. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 D.pseudoobscura:377

F6WXF1              	100.00%		Q29DB8              	100.00%
Bootstrap support for F6WXF1 as seed ortholog is 99%.
Bootstrap support for Q29DB8 as seed ortholog is 100%.

Group of orthologs #1242. Best score 377 bits
Score difference with first non-orthologous sequence - C.intestinalis:377 D.pseudoobscura:377

H2XTB8              	100.00%		Q29LA9              	100.00%
Bootstrap support for H2XTB8 as seed ortholog is 100%.
Bootstrap support for Q29LA9 as seed ortholog is 100%.

Group of orthologs #1243. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 D.pseudoobscura:376

H2XUG5              	100.00%		Q29JI1              	100.00%
H2XXW3              	9.30%		
Bootstrap support for H2XUG5 as seed ortholog is 100%.
Bootstrap support for Q29JI1 as seed ortholog is 100%.

Group of orthologs #1244. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 D.pseudoobscura:376

F6U602              	100.00%		B5DVW4              	100.00%
Bootstrap support for F6U602 as seed ortholog is 100%.
Bootstrap support for B5DVW4 as seed ortholog is 100%.

Group of orthologs #1245. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:376 D.pseudoobscura:376

F6UCG6              	100.00%		Q28XN2              	100.00%
Bootstrap support for F6UCG6 as seed ortholog is 100%.
Bootstrap support for Q28XN2 as seed ortholog is 100%.

Group of orthologs #1246. Best score 376 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 D.pseudoobscura:376

F6PPC0              	100.00%		Q29BX7              	100.00%
Bootstrap support for F6PPC0 as seed ortholog is 100%.
Bootstrap support for Q29BX7 as seed ortholog is 100%.

Group of orthologs #1247. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 D.pseudoobscura:375

F6TXT5              	100.00%		Q29C13              	100.00%
                    	       		B5DTW2              	26.13%
Bootstrap support for F6TXT5 as seed ortholog is 100%.
Bootstrap support for Q29C13 as seed ortholog is 100%.

Group of orthologs #1248. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 D.pseudoobscura:375

Q6XZ09              	100.00%		Q4VUH9              	100.00%
Q6XZ10              	75.67%		
Bootstrap support for Q6XZ09 as seed ortholog is 100%.
Bootstrap support for Q4VUH9 as seed ortholog is 100%.

Group of orthologs #1249. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 D.pseudoobscura:124

F6X7W0              	100.00%		Q295M2              	100.00%
Bootstrap support for F6X7W0 as seed ortholog is 100%.
Bootstrap support for Q295M2 as seed ortholog is 99%.

Group of orthologs #1250. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 D.pseudoobscura:375

F6YNG6              	100.00%		Q291R2              	100.00%
Bootstrap support for F6YNG6 as seed ortholog is 100%.
Bootstrap support for Q291R2 as seed ortholog is 100%.

Group of orthologs #1251. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 D.pseudoobscura:375

F7A1T4              	100.00%		Q28XN6              	100.00%
Bootstrap support for F7A1T4 as seed ortholog is 100%.
Bootstrap support for Q28XN6 as seed ortholog is 100%.

Group of orthologs #1252. Best score 375 bits
Score difference with first non-orthologous sequence - C.intestinalis:375 D.pseudoobscura:136

H2XR99              	100.00%		Q2LZW0              	100.00%
Bootstrap support for H2XR99 as seed ortholog is 100%.
Bootstrap support for Q2LZW0 as seed ortholog is 98%.

Group of orthologs #1253. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 D.pseudoobscura:161

H2XW16              	100.00%		Q29HM7              	100.00%
                    	       		B5DI54              	56.56%
Bootstrap support for H2XW16 as seed ortholog is 68%.
Alternative seed ortholog is L7N0T1 (13 bits away from this cluster)
Bootstrap support for Q29HM7 as seed ortholog is 100%.

Group of orthologs #1254. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 D.pseudoobscura:220

F6RS66              	100.00%		Q297P6              	100.00%
Bootstrap support for F6RS66 as seed ortholog is 100%.
Bootstrap support for Q297P6 as seed ortholog is 100%.

Group of orthologs #1255. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 D.pseudoobscura:374

F7AXB1              	100.00%		Q28YW0              	100.00%
Bootstrap support for F7AXB1 as seed ortholog is 100%.
Bootstrap support for Q28YW0 as seed ortholog is 100%.

Group of orthologs #1256. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 D.pseudoobscura:374

F7B5G0              	100.00%		Q290Y4              	100.00%
Bootstrap support for F7B5G0 as seed ortholog is 100%.
Bootstrap support for Q290Y4 as seed ortholog is 100%.

Group of orthologs #1257. Best score 374 bits
Score difference with first non-orthologous sequence - C.intestinalis:374 D.pseudoobscura:204

F7BL16              	100.00%		Q29MY5              	100.00%
Bootstrap support for F7BL16 as seed ortholog is 100%.
Bootstrap support for Q29MY5 as seed ortholog is 100%.

Group of orthologs #1258. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 D.pseudoobscura:373

F6S043              	100.00%		Q29LL3              	100.00%
                    	       		Q29LL4              	47.32%
                    	       		B5DZA0              	25.78%
                    	       		B5DZA2              	25.28%
                    	       		Q292I5              	24.41%
                    	       		B5DZA1              	23.04%
                    	       		Q292I4              	22.67%
                    	       		Q292I6              	21.42%
                    	       		Q292I7              	11.96%
Bootstrap support for F6S043 as seed ortholog is 100%.
Bootstrap support for Q29LL3 as seed ortholog is 100%.

Group of orthologs #1259. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 D.pseudoobscura:282

F7BJ92              	100.00%		B5DLK8              	100.00%
Bootstrap support for F7BJ92 as seed ortholog is 100%.
Bootstrap support for B5DLK8 as seed ortholog is 100%.

Group of orthologs #1260. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 D.pseudoobscura:373

F6V4K8              	100.00%		Q28YM1              	100.00%
Bootstrap support for F6V4K8 as seed ortholog is 100%.
Bootstrap support for Q28YM1 as seed ortholog is 100%.

Group of orthologs #1261. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 D.pseudoobscura:195

F6VQ38              	100.00%		Q29FL5              	100.00%
Bootstrap support for F6VQ38 as seed ortholog is 99%.
Bootstrap support for Q29FL5 as seed ortholog is 100%.

Group of orthologs #1262. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 D.pseudoobscura:373

F6UFF5              	100.00%		Q29PB8              	100.00%
Bootstrap support for F6UFF5 as seed ortholog is 100%.
Bootstrap support for Q29PB8 as seed ortholog is 100%.

Group of orthologs #1263. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 D.pseudoobscura:373

F7B2R9              	100.00%		Q29EI4              	100.00%
Bootstrap support for F7B2R9 as seed ortholog is 100%.
Bootstrap support for Q29EI4 as seed ortholog is 100%.

Group of orthologs #1264. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 D.pseudoobscura:373

F7B418              	100.00%		Q29N95              	100.00%
Bootstrap support for F7B418 as seed ortholog is 100%.
Bootstrap support for Q29N95 as seed ortholog is 100%.

Group of orthologs #1265. Best score 373 bits
Score difference with first non-orthologous sequence - C.intestinalis:373 D.pseudoobscura:223

H2Y395              	100.00%		Q298L4              	100.00%
Bootstrap support for H2Y395 as seed ortholog is 100%.
Bootstrap support for Q298L4 as seed ortholog is 100%.

Group of orthologs #1266. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 D.pseudoobscura:372

F6W2S7              	100.00%		B5DX70              	100.00%
                    	       		I5APV8              	56.81%
                    	       		B5DWY2              	38.26%
Bootstrap support for F6W2S7 as seed ortholog is 93%.
Bootstrap support for B5DX70 as seed ortholog is 100%.

Group of orthologs #1267. Best score 372 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 D.pseudoobscura:372

H2XZY0              	100.00%		Q29I48              	100.00%
                    	       		B5DJ87              	13.15%
Bootstrap support for H2XZY0 as seed ortholog is 99%.
Bootstrap support for Q29I48 as seed ortholog is 100%.

Group of orthologs #1268. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 D.pseudoobscura:120

F6TIY7              	100.00%		B5DII0              	100.00%
Bootstrap support for F6TIY7 as seed ortholog is 63%.
Alternative seed ortholog is F6WTG3 (17 bits away from this cluster)
Bootstrap support for B5DII0 as seed ortholog is 99%.

Group of orthologs #1269. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:371

F6WNH9              	100.00%		B5DYN3              	100.00%
Bootstrap support for F6WNH9 as seed ortholog is 100%.
Bootstrap support for B5DYN3 as seed ortholog is 100%.

Group of orthologs #1270. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 D.pseudoobscura:371

F6PR01              	100.00%		Q29DE1              	100.00%
Bootstrap support for F6PR01 as seed ortholog is 100%.
Bootstrap support for Q29DE1 as seed ortholog is 100%.

Group of orthologs #1271. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 D.pseudoobscura:219

F6VQ02              	100.00%		Q28ZE2              	100.00%
Bootstrap support for F6VQ02 as seed ortholog is 100%.
Bootstrap support for Q28ZE2 as seed ortholog is 100%.

Group of orthologs #1272. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 D.pseudoobscura:294

F6XKQ1              	100.00%		Q292P7              	100.00%
Bootstrap support for F6XKQ1 as seed ortholog is 100%.
Bootstrap support for Q292P7 as seed ortholog is 100%.

Group of orthologs #1273. Best score 371 bits
Score difference with first non-orthologous sequence - C.intestinalis:371 D.pseudoobscura:371

H2XK39              	100.00%		Q296F4              	100.00%
Bootstrap support for H2XK39 as seed ortholog is 100%.
Bootstrap support for Q296F4 as seed ortholog is 100%.

Group of orthologs #1274. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 D.pseudoobscura:370

F7B670              	100.00%		Q28ZS2              	100.00%
                    	       		B5E155              	35.32%
Bootstrap support for F7B670 as seed ortholog is 100%.
Bootstrap support for Q28ZS2 as seed ortholog is 100%.

Group of orthologs #1275. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 D.pseudoobscura:110

F6VBC2              	100.00%		B5DVG7              	100.00%
Bootstrap support for F6VBC2 as seed ortholog is 100%.
Bootstrap support for B5DVG7 as seed ortholog is 95%.

Group of orthologs #1276. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 D.pseudoobscura:370

F6TAR1              	100.00%		Q29DT6              	100.00%
Bootstrap support for F6TAR1 as seed ortholog is 100%.
Bootstrap support for Q29DT6 as seed ortholog is 100%.

Group of orthologs #1277. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 D.pseudoobscura:370

F6QS20              	100.00%		Q2LYK8              	100.00%
Bootstrap support for F6QS20 as seed ortholog is 100%.
Bootstrap support for Q2LYK8 as seed ortholog is 100%.

Group of orthologs #1278. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 D.pseudoobscura:370

F6R3V0              	100.00%		Q2M179              	100.00%
Bootstrap support for F6R3V0 as seed ortholog is 100%.
Bootstrap support for Q2M179 as seed ortholog is 100%.

Group of orthologs #1279. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 D.pseudoobscura:370

F6ULQ2              	100.00%		Q29NF6              	100.00%
Bootstrap support for F6ULQ2 as seed ortholog is 100%.
Bootstrap support for Q29NF6 as seed ortholog is 100%.

Group of orthologs #1280. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 D.pseudoobscura:370

F6YVQ9              	100.00%		Q2LYJ2              	100.00%
Bootstrap support for F6YVQ9 as seed ortholog is 100%.
Bootstrap support for Q2LYJ2 as seed ortholog is 100%.

Group of orthologs #1281. Best score 370 bits
Score difference with first non-orthologous sequence - C.intestinalis:370 D.pseudoobscura:142

F7BDH7              	100.00%		Q2LYQ7              	100.00%
Bootstrap support for F7BDH7 as seed ortholog is 100%.
Bootstrap support for Q2LYQ7 as seed ortholog is 99%.

Group of orthologs #1282. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 D.pseudoobscura:369

F6YD02              	100.00%		B5DV81              	100.00%
Bootstrap support for F6YD02 as seed ortholog is 100%.
Bootstrap support for B5DV81 as seed ortholog is 100%.

Group of orthologs #1283. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 D.pseudoobscura:369

F6YFM8              	100.00%		Q28WT0              	100.00%
Bootstrap support for F6YFM8 as seed ortholog is 100%.
Bootstrap support for Q28WT0 as seed ortholog is 100%.

Group of orthologs #1284. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 D.pseudoobscura:369

F6SJ40              	100.00%		Q29JK0              	100.00%
Bootstrap support for F6SJ40 as seed ortholog is 100%.
Bootstrap support for Q29JK0 as seed ortholog is 100%.

Group of orthologs #1285. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 D.pseudoobscura:369

F6TW46              	100.00%		Q29HH7              	100.00%
Bootstrap support for F6TW46 as seed ortholog is 100%.
Bootstrap support for Q29HH7 as seed ortholog is 100%.

Group of orthologs #1286. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 D.pseudoobscura:369

F7ASN6              	100.00%		Q28X43              	100.00%
Bootstrap support for F7ASN6 as seed ortholog is 100%.
Bootstrap support for Q28X43 as seed ortholog is 100%.

Group of orthologs #1287. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:369 D.pseudoobscura:304

F6ZUD0              	100.00%		Q29BU9              	100.00%
Bootstrap support for F6ZUD0 as seed ortholog is 100%.
Bootstrap support for Q29BU9 as seed ortholog is 100%.

Group of orthologs #1288. Best score 369 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 D.pseudoobscura:269

H2XLN0              	100.00%		Q29G37              	100.00%
Bootstrap support for H2XLN0 as seed ortholog is 99%.
Bootstrap support for Q29G37 as seed ortholog is 100%.

Group of orthologs #1289. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 D.pseudoobscura:368

F6PKT6              	100.00%		Q28X88              	100.00%
Bootstrap support for F6PKT6 as seed ortholog is 100%.
Bootstrap support for Q28X88 as seed ortholog is 100%.

Group of orthologs #1290. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 D.pseudoobscura:260

F6Z8G0              	100.00%		B5DIU6              	100.00%
Bootstrap support for F6Z8G0 as seed ortholog is 100%.
Bootstrap support for B5DIU6 as seed ortholog is 100%.

Group of orthologs #1291. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 D.pseudoobscura:368

F6SYW5              	100.00%		Q292G5              	100.00%
Bootstrap support for F6SYW5 as seed ortholog is 100%.
Bootstrap support for Q292G5 as seed ortholog is 100%.

Group of orthologs #1292. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 D.pseudoobscura:368

F6X600              	100.00%		Q28Y18              	100.00%
Bootstrap support for F6X600 as seed ortholog is 100%.
Bootstrap support for Q28Y18 as seed ortholog is 100%.

Group of orthologs #1293. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 D.pseudoobscura:368

F6X413              	100.00%		Q298L7              	100.00%
Bootstrap support for F6X413 as seed ortholog is 100%.
Bootstrap support for Q298L7 as seed ortholog is 100%.

Group of orthologs #1294. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 D.pseudoobscura:368

F7BNW5              	100.00%		Q2LZA8              	100.00%
Bootstrap support for F7BNW5 as seed ortholog is 100%.
Bootstrap support for Q2LZA8 as seed ortholog is 100%.

Group of orthologs #1295. Best score 368 bits
Score difference with first non-orthologous sequence - C.intestinalis:368 D.pseudoobscura:368

H2XT24              	100.00%		Q29HV1              	100.00%
Bootstrap support for H2XT24 as seed ortholog is 100%.
Bootstrap support for Q29HV1 as seed ortholog is 100%.

Group of orthologs #1296. Best score 367 bits
Score difference with first non-orthologous sequence - C.intestinalis:367 D.pseudoobscura:367

F7AV11              	100.00%		Q29CJ2              	100.00%
Bootstrap support for F7AV11 as seed ortholog is 100%.
Bootstrap support for Q29CJ2 as seed ortholog is 100%.

Group of orthologs #1297. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 D.pseudoobscura:225

H2Y369              	100.00%		B5DPF3              	100.00%
F7AHM9              	17.85%		Q294E6              	27.25%
F6XHR2              	8.07%		B5DWQ2              	20.56%
Bootstrap support for H2Y369 as seed ortholog is 99%.
Bootstrap support for B5DPF3 as seed ortholog is 100%.

Group of orthologs #1298. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 D.pseudoobscura:366

F6SYV7              	100.00%		Q28WW5              	100.00%
Bootstrap support for F6SYV7 as seed ortholog is 100%.
Bootstrap support for Q28WW5 as seed ortholog is 100%.

Group of orthologs #1299. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 D.pseudoobscura:366

F6UUV9              	100.00%		Q295W1              	100.00%
Bootstrap support for F6UUV9 as seed ortholog is 100%.
Bootstrap support for Q295W1 as seed ortholog is 100%.

Group of orthologs #1300. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:366 D.pseudoobscura:366

H2Y005              	100.00%		B5E096              	100.00%
Bootstrap support for H2Y005 as seed ortholog is 100%.
Bootstrap support for B5E096 as seed ortholog is 100%.

Group of orthologs #1301. Best score 366 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:162

H2XWP0              	100.00%		Q28XJ2              	100.00%
Bootstrap support for H2XWP0 as seed ortholog is 100%.
Bootstrap support for Q28XJ2 as seed ortholog is 100%.

Group of orthologs #1302. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 D.pseudoobscura:39

F6VTU7              	23.97%		B5DP18              	100.00%
H2XPZ6              	100.00%		Q299F1              	100.00%
F6U0P5              	13.33%		Q2LZN1              	32.81%
F6W9Y0              	6.92%		Q29BY5              	15.50%
                    	       		Q2LZN0              	11.13%
                    	       		Q28XL2              	10.81%
                    	       		Q28XS3              	9.25%
                    	       		Q28XS4              	8.68%
Bootstrap support for H2XPZ6 as seed ortholog is 100%.
Bootstrap support for B5DP18 as seed ortholog is 77%.
Bootstrap support for Q299F1 as seed ortholog is 78%.

Group of orthologs #1303. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 D.pseudoobscura:31

F6UEG1              	100.00%		B5E0Y6              	100.00%
                    	       		Q29C81              	39.08%
Bootstrap support for F6UEG1 as seed ortholog is 97%.
Bootstrap support for B5E0Y6 as seed ortholog is 84%.

Group of orthologs #1304. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 D.pseudoobscura:207

F6S0X0              	100.00%		B5DM48              	100.00%
Bootstrap support for F6S0X0 as seed ortholog is 99%.
Bootstrap support for B5DM48 as seed ortholog is 99%.

Group of orthologs #1305. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 D.pseudoobscura:365

F6UDU8              	100.00%		B5DJR1              	100.00%
Bootstrap support for F6UDU8 as seed ortholog is 100%.
Bootstrap support for B5DJR1 as seed ortholog is 100%.

Group of orthologs #1306. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 D.pseudoobscura:365

F6VHI4              	100.00%		Q29DY0              	100.00%
Bootstrap support for F6VHI4 as seed ortholog is 100%.
Bootstrap support for Q29DY0 as seed ortholog is 100%.

Group of orthologs #1307. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 D.pseudoobscura:365

F6U9X5              	100.00%		Q29J55              	100.00%
Bootstrap support for F6U9X5 as seed ortholog is 100%.
Bootstrap support for Q29J55 as seed ortholog is 100%.

Group of orthologs #1308. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 D.pseudoobscura:227

F6ZN89              	100.00%		Q29L25              	100.00%
Bootstrap support for F6ZN89 as seed ortholog is 100%.
Bootstrap support for Q29L25 as seed ortholog is 100%.

Group of orthologs #1309. Best score 365 bits
Score difference with first non-orthologous sequence - C.intestinalis:365 D.pseudoobscura:283

F7BQ53              	100.00%		Q29JK5              	100.00%
Bootstrap support for F7BQ53 as seed ortholog is 100%.
Bootstrap support for Q29JK5 as seed ortholog is 100%.

Group of orthologs #1310. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 D.pseudoobscura:129

F6T6N4              	100.00%		Q28XK9              	100.00%
Bootstrap support for F6T6N4 as seed ortholog is 83%.
Bootstrap support for Q28XK9 as seed ortholog is 99%.

Group of orthologs #1311. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 D.pseudoobscura:364

F6U8A8              	100.00%		B5E1K2              	100.00%
Bootstrap support for F6U8A8 as seed ortholog is 100%.
Bootstrap support for B5E1K2 as seed ortholog is 100%.

Group of orthologs #1312. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 D.pseudoobscura:364

F6SSM8              	100.00%		Q29AF5              	100.00%
Bootstrap support for F6SSM8 as seed ortholog is 100%.
Bootstrap support for Q29AF5 as seed ortholog is 100%.

Group of orthologs #1313. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 D.pseudoobscura:364

F6Y444              	100.00%		Q291R1              	100.00%
Bootstrap support for F6Y444 as seed ortholog is 100%.
Bootstrap support for Q291R1 as seed ortholog is 100%.

Group of orthologs #1314. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 D.pseudoobscura:37

F6SH39              	100.00%		Q29NK4              	100.00%
Bootstrap support for F6SH39 as seed ortholog is 100%.
Bootstrap support for Q29NK4 as seed ortholog is 59%.
Alternative seed ortholog is Q28Z88 (37 bits away from this cluster)

Group of orthologs #1315. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 D.pseudoobscura:51

F7A0P0              	100.00%		Q295U1              	100.00%
Bootstrap support for F7A0P0 as seed ortholog is 100%.
Bootstrap support for Q295U1 as seed ortholog is 96%.

Group of orthologs #1316. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:364 D.pseudoobscura:364

F6ZPX3              	100.00%		Q29BU7              	100.00%
Bootstrap support for F6ZPX3 as seed ortholog is 100%.
Bootstrap support for Q29BU7 as seed ortholog is 100%.

Group of orthologs #1317. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 D.pseudoobscura:364

Q1RQ07              	100.00%		Q28WL6              	100.00%
Bootstrap support for Q1RQ07 as seed ortholog is 77%.
Bootstrap support for Q28WL6 as seed ortholog is 100%.

Group of orthologs #1318. Best score 364 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 D.pseudoobscura:364

H2XQC1              	100.00%		Q29N71              	100.00%
Bootstrap support for H2XQC1 as seed ortholog is 100%.
Bootstrap support for Q29N71 as seed ortholog is 100%.

Group of orthologs #1319. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 D.pseudoobscura:89

F7AFI4              	100.00%		B5DRC5              	100.00%
F6YCJ4              	100.00%		B5DNA4              	100.00%
F6YGS0              	31.31%		Q29GQ3              	18.28%
Bootstrap support for F7AFI4 as seed ortholog is 100%.
Bootstrap support for F6YCJ4 as seed ortholog is 100%.
Bootstrap support for B5DRC5 as seed ortholog is 99%.
Bootstrap support for B5DNA4 as seed ortholog is 99%.

Group of orthologs #1320. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 D.pseudoobscura:88

F6RD62              	100.00%		B5DK50              	100.00%
Bootstrap support for F6RD62 as seed ortholog is 99%.
Bootstrap support for B5DK50 as seed ortholog is 99%.

Group of orthologs #1321. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 D.pseudoobscura:127

F6T143              	100.00%		Q28WS8              	100.00%
Bootstrap support for F6T143 as seed ortholog is 99%.
Bootstrap support for Q28WS8 as seed ortholog is 99%.

Group of orthologs #1322. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 D.pseudoobscura:163

F6VVE9              	100.00%		B5E169              	100.00%
Bootstrap support for F6VVE9 as seed ortholog is 100%.
Bootstrap support for B5E169 as seed ortholog is 99%.

Group of orthologs #1323. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 D.pseudoobscura:41

H2XJG6              	100.00%		B5DLL1              	100.00%
Bootstrap support for H2XJG6 as seed ortholog is 100%.
Bootstrap support for B5DLL1 as seed ortholog is 98%.

Group of orthologs #1324. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 D.pseudoobscura:363

F6SGF7              	100.00%		Q29BN4              	100.00%
Bootstrap support for F6SGF7 as seed ortholog is 100%.
Bootstrap support for Q29BN4 as seed ortholog is 100%.

Group of orthologs #1325. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 D.pseudoobscura:46

F6WL19              	100.00%		Q296W0              	100.00%
Bootstrap support for F6WL19 as seed ortholog is 71%.
Alternative seed ortholog is F6TNW3 (16 bits away from this cluster)
Bootstrap support for Q296W0 as seed ortholog is 95%.

Group of orthologs #1326. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 D.pseudoobscura:106

F6S4V6              	100.00%		Q29P16              	100.00%
Bootstrap support for F6S4V6 as seed ortholog is 100%.
Bootstrap support for Q29P16 as seed ortholog is 97%.

Group of orthologs #1327. Best score 363 bits
Score difference with first non-orthologous sequence - C.intestinalis:363 D.pseudoobscura:363

H2XRS3              	100.00%		Q29A91              	100.00%
Bootstrap support for H2XRS3 as seed ortholog is 100%.
Bootstrap support for Q29A91 as seed ortholog is 100%.

Group of orthologs #1328. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 D.pseudoobscura:73

F6VDW8              	100.00%		Q28WN8              	100.00%
F6VDJ9              	11.10%		
Bootstrap support for F6VDW8 as seed ortholog is 100%.
Bootstrap support for Q28WN8 as seed ortholog is 95%.

Group of orthologs #1329. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:362 D.pseudoobscura:362

F6XVX1              	100.00%		I5AP38              	100.00%
Bootstrap support for F6XVX1 as seed ortholog is 100%.
Bootstrap support for I5AP38 as seed ortholog is 100%.

Group of orthologs #1330. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 D.pseudoobscura:362

F6X2C4              	100.00%		Q29BI5              	100.00%
Bootstrap support for F6X2C4 as seed ortholog is 100%.
Bootstrap support for Q29BI5 as seed ortholog is 100%.

Group of orthologs #1331. Best score 362 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 D.pseudoobscura:132

F7BAT7              	100.00%		Q29CK9              	100.00%
Bootstrap support for F7BAT7 as seed ortholog is 100%.
Bootstrap support for Q29CK9 as seed ortholog is 100%.

Group of orthologs #1332. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 D.pseudoobscura:361

F6WHI9              	100.00%		B5DXS8              	100.00%
Bootstrap support for F6WHI9 as seed ortholog is 100%.
Bootstrap support for B5DXS8 as seed ortholog is 100%.

Group of orthologs #1333. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 D.pseudoobscura:186

H2XZF9              	100.00%		B5DIE0              	100.00%
Bootstrap support for H2XZF9 as seed ortholog is 100%.
Bootstrap support for B5DIE0 as seed ortholog is 100%.

Group of orthologs #1334. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 D.pseudoobscura:361

F6YN96              	100.00%		Q295A4              	100.00%
Bootstrap support for F6YN96 as seed ortholog is 100%.
Bootstrap support for Q295A4 as seed ortholog is 100%.

Group of orthologs #1335. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 D.pseudoobscura:103

F6XLK3              	100.00%		Q29FH9              	100.00%
Bootstrap support for F6XLK3 as seed ortholog is 100%.
Bootstrap support for Q29FH9 as seed ortholog is 99%.

Group of orthologs #1336. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 D.pseudoobscura:361

F6THW7              	100.00%		Q2LZH8              	100.00%
Bootstrap support for F6THW7 as seed ortholog is 100%.
Bootstrap support for Q2LZH8 as seed ortholog is 100%.

Group of orthologs #1337. Best score 361 bits
Score difference with first non-orthologous sequence - C.intestinalis:361 D.pseudoobscura:361

F7A1R5              	100.00%		Q29LG5              	100.00%
Bootstrap support for F7A1R5 as seed ortholog is 100%.
Bootstrap support for Q29LG5 as seed ortholog is 100%.

Group of orthologs #1338. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 D.pseudoobscura:168

F6W2M8              	100.00%		Q29AB2              	100.00%
                    	       		Q295R2              	23.31%
Bootstrap support for F6W2M8 as seed ortholog is 100%.
Bootstrap support for Q29AB2 as seed ortholog is 100%.

Group of orthologs #1339. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 D.pseudoobscura:360

F6UT38              	100.00%		B5DP95              	100.00%
Bootstrap support for F6UT38 as seed ortholog is 100%.
Bootstrap support for B5DP95 as seed ortholog is 100%.

Group of orthologs #1340. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 D.pseudoobscura:360

F6V9X6              	100.00%		B5DPE3              	100.00%
Bootstrap support for F6V9X6 as seed ortholog is 100%.
Bootstrap support for B5DPE3 as seed ortholog is 100%.

Group of orthologs #1341. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 D.pseudoobscura:360

F6XER0              	100.00%		Q299Q5              	100.00%
Bootstrap support for F6XER0 as seed ortholog is 100%.
Bootstrap support for Q299Q5 as seed ortholog is 100%.

Group of orthologs #1342. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 D.pseudoobscura:314

F6Y1U4              	100.00%		Q29IM2              	100.00%
Bootstrap support for F6Y1U4 as seed ortholog is 100%.
Bootstrap support for Q29IM2 as seed ortholog is 100%.

Group of orthologs #1343. Best score 360 bits
Score difference with first non-orthologous sequence - C.intestinalis:360 D.pseudoobscura:360

F6XVD3              	100.00%		Q2LYS2              	100.00%
Bootstrap support for F6XVD3 as seed ortholog is 100%.
Bootstrap support for Q2LYS2 as seed ortholog is 100%.

Group of orthologs #1344. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 D.pseudoobscura:60

F6V6N1              	100.00%		B5DIH3              	100.00%
                    	       		B5DMU0              	25.30%
                    	       		B5DM03              	11.91%
Bootstrap support for F6V6N1 as seed ortholog is 100%.
Bootstrap support for B5DIH3 as seed ortholog is 88%.

Group of orthologs #1345. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 D.pseudoobscura:127

F6PYJ8              	100.00%		Q29E34              	100.00%
Bootstrap support for F6PYJ8 as seed ortholog is 100%.
Bootstrap support for Q29E34 as seed ortholog is 99%.

Group of orthologs #1346. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 D.pseudoobscura:359

F6SEU1              	100.00%		Q29E31              	100.00%
Bootstrap support for F6SEU1 as seed ortholog is 100%.
Bootstrap support for Q29E31 as seed ortholog is 100%.

Group of orthologs #1347. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 D.pseudoobscura:359

F6TEZ1              	100.00%		Q29K75              	100.00%
Bootstrap support for F6TEZ1 as seed ortholog is 100%.
Bootstrap support for Q29K75 as seed ortholog is 100%.

Group of orthologs #1348. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 D.pseudoobscura:359

F6TZR8              	100.00%		Q29KW1              	100.00%
Bootstrap support for F6TZR8 as seed ortholog is 99%.
Bootstrap support for Q29KW1 as seed ortholog is 100%.

Group of orthologs #1349. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 D.pseudoobscura:138

F6WPA9              	100.00%		Q29FP5              	100.00%
Bootstrap support for F6WPA9 as seed ortholog is 100%.
Bootstrap support for Q29FP5 as seed ortholog is 98%.

Group of orthologs #1350. Best score 359 bits
Score difference with first non-orthologous sequence - C.intestinalis:359 D.pseudoobscura:359

F6Z7S0              	100.00%		Q2M0R1              	100.00%
Bootstrap support for F6Z7S0 as seed ortholog is 100%.
Bootstrap support for Q2M0R1 as seed ortholog is 100%.

Group of orthologs #1351. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 D.pseudoobscura:262

F6SM91              	100.00%		B5DS00              	100.00%
F6SMM7              	46.88%		
F7B0A1              	43.41%		
F6SDH3              	24.83%		
F6U7F8              	15.50%		
F6RW80              	14.42%		
Bootstrap support for F6SM91 as seed ortholog is 82%.
Bootstrap support for B5DS00 as seed ortholog is 100%.

Group of orthologs #1352. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 D.pseudoobscura:358

F6REB5              	100.00%		Q29KE9              	100.00%
                    	       		Q28XX9              	12.86%
                    	       		Q29KC1              	9.73%
Bootstrap support for F6REB5 as seed ortholog is 96%.
Bootstrap support for Q29KE9 as seed ortholog is 100%.

Group of orthologs #1353. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 D.pseudoobscura:358

F6TXZ8              	100.00%		B5DN32              	100.00%
Bootstrap support for F6TXZ8 as seed ortholog is 100%.
Bootstrap support for B5DN32 as seed ortholog is 100%.

Group of orthologs #1354. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 D.pseudoobscura:358

F6T7M7              	100.00%		Q299J6              	100.00%
Bootstrap support for F6T7M7 as seed ortholog is 100%.
Bootstrap support for Q299J6 as seed ortholog is 100%.

Group of orthologs #1355. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 D.pseudoobscura:358

F6QE47              	100.00%		Q29GY0              	100.00%
Bootstrap support for F6QE47 as seed ortholog is 100%.
Bootstrap support for Q29GY0 as seed ortholog is 100%.

Group of orthologs #1356. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 D.pseudoobscura:204

F6RD19              	100.00%		Q29IB2              	100.00%
Bootstrap support for F6RD19 as seed ortholog is 100%.
Bootstrap support for Q29IB2 as seed ortholog is 100%.

Group of orthologs #1357. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 D.pseudoobscura:358

F6UQM6              	100.00%		Q29FH4              	100.00%
Bootstrap support for F6UQM6 as seed ortholog is 100%.
Bootstrap support for Q29FH4 as seed ortholog is 100%.

Group of orthologs #1358. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:197

F6VMY2              	100.00%		Q29KB8              	100.00%
Bootstrap support for F6VMY2 as seed ortholog is 100%.
Bootstrap support for Q29KB8 as seed ortholog is 100%.

Group of orthologs #1359. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:358 D.pseudoobscura:207

H2XUE3              	100.00%		Q29B24              	100.00%
Bootstrap support for H2XUE3 as seed ortholog is 100%.
Bootstrap support for Q29B24 as seed ortholog is 100%.

Group of orthologs #1360. Best score 358 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 D.pseudoobscura:88

F7B7R9              	100.00%		Q29PI1              	100.00%
Bootstrap support for F7B7R9 as seed ortholog is 60%.
Alternative seed ortholog is F6TIF0 (22 bits away from this cluster)
Bootstrap support for Q29PI1 as seed ortholog is 93%.

Group of orthologs #1361. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 D.pseudoobscura:357

F6UAP7              	100.00%		Q29LR4              	100.00%
                    	       		B5DIU2              	48.11%
                    	       		B5DL11              	18.45%
Bootstrap support for F6UAP7 as seed ortholog is 100%.
Bootstrap support for Q29LR4 as seed ortholog is 100%.

Group of orthologs #1362. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 D.pseudoobscura:101

F6SSI8              	100.00%		Q28Y14              	100.00%
Bootstrap support for F6SSI8 as seed ortholog is 100%.
Bootstrap support for Q28Y14 as seed ortholog is 99%.

Group of orthologs #1363. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 D.pseudoobscura:357

F6WYI2              	100.00%		Q296D9              	100.00%
Bootstrap support for F6WYI2 as seed ortholog is 100%.
Bootstrap support for Q296D9 as seed ortholog is 100%.

Group of orthologs #1364. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 D.pseudoobscura:357

F6YHC8              	100.00%		Q291S7              	100.00%
Bootstrap support for F6YHC8 as seed ortholog is 100%.
Bootstrap support for Q291S7 as seed ortholog is 100%.

Group of orthologs #1365. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 D.pseudoobscura:357

F6WK69              	100.00%		Q29BT6              	100.00%
Bootstrap support for F6WK69 as seed ortholog is 100%.
Bootstrap support for Q29BT6 as seed ortholog is 100%.

Group of orthologs #1366. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 D.pseudoobscura:357

F6Z2W9              	100.00%		Q29LW9              	100.00%
Bootstrap support for F6Z2W9 as seed ortholog is 100%.
Bootstrap support for Q29LW9 as seed ortholog is 100%.

Group of orthologs #1367. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 D.pseudoobscura:357

F6ZWS5              	100.00%		Q29M19              	100.00%
Bootstrap support for F6ZWS5 as seed ortholog is 100%.
Bootstrap support for Q29M19 as seed ortholog is 100%.

Group of orthologs #1368. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 D.pseudoobscura:357

F6ZVC8              	100.00%		Q29MT7              	100.00%
Bootstrap support for F6ZVC8 as seed ortholog is 100%.
Bootstrap support for Q29MT7 as seed ortholog is 100%.

Group of orthologs #1369. Best score 357 bits
Score difference with first non-orthologous sequence - C.intestinalis:357 D.pseudoobscura:357

Q1RLG9              	100.00%		Q28XI9              	100.00%
Bootstrap support for Q1RLG9 as seed ortholog is 100%.
Bootstrap support for Q28XI9 as seed ortholog is 100%.

Group of orthologs #1370. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 D.pseudoobscura:356

F6TJL2              	100.00%		Q28ZC5              	100.00%
F6TJJ0              	20.03%		Q28ZC4              	20.05%
F6TFE5              	13.16%		
Bootstrap support for F6TJL2 as seed ortholog is 100%.
Bootstrap support for Q28ZC5 as seed ortholog is 100%.

Group of orthologs #1371. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 D.pseudoobscura:72

Q7YT79              	100.00%		Q29EV6              	100.00%
                    	       		B5DQJ0              	39.47%
Bootstrap support for Q7YT79 as seed ortholog is 96%.
Bootstrap support for Q29EV6 as seed ortholog is 99%.

Group of orthologs #1372. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 D.pseudoobscura:75

F6XDT3              	100.00%		B5DPJ4              	100.00%
Bootstrap support for F6XDT3 as seed ortholog is 100%.
Bootstrap support for B5DPJ4 as seed ortholog is 99%.

Group of orthologs #1373. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 D.pseudoobscura:356

F6Q512              	100.00%		Q292P6              	100.00%
Bootstrap support for F6Q512 as seed ortholog is 100%.
Bootstrap support for Q292P6 as seed ortholog is 100%.

Group of orthologs #1374. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 D.pseudoobscura:356

F6Q041              	100.00%		Q29HT6              	100.00%
Bootstrap support for F6Q041 as seed ortholog is 100%.
Bootstrap support for Q29HT6 as seed ortholog is 100%.

Group of orthologs #1375. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 D.pseudoobscura:292

F7AZS2              	100.00%		Q290L5              	100.00%
Bootstrap support for F7AZS2 as seed ortholog is 100%.
Bootstrap support for Q290L5 as seed ortholog is 100%.

Group of orthologs #1376. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 D.pseudoobscura:356

F6ZNA8              	100.00%		Q29JY2              	100.00%
Bootstrap support for F6ZNA8 as seed ortholog is 100%.
Bootstrap support for Q29JY2 as seed ortholog is 100%.

Group of orthologs #1377. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 D.pseudoobscura:356

H2Y3P6              	100.00%		I7M6Z1              	100.00%
Bootstrap support for H2Y3P6 as seed ortholog is 100%.
Bootstrap support for I7M6Z1 as seed ortholog is 100%.

Group of orthologs #1378. Best score 356 bits
Score difference with first non-orthologous sequence - C.intestinalis:356 D.pseudoobscura:356

H2XRD9              	100.00%		Q29NV7              	100.00%
Bootstrap support for H2XRD9 as seed ortholog is 100%.
Bootstrap support for Q29NV7 as seed ortholog is 100%.

Group of orthologs #1379. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 D.pseudoobscura:355

F6PNT4              	100.00%		Q29BN0              	100.00%
                    	       		B5DYA6              	68.27%
                    	       		Q29BN1              	55.58%
                    	       		B5DW61              	40.92%
                    	       		B5DTQ6              	39.39%
                    	       		B5DTQ5              	38.07%
                    	       		B5DW62              	37.64%
Bootstrap support for F6PNT4 as seed ortholog is 99%.
Bootstrap support for Q29BN0 as seed ortholog is 100%.

Group of orthologs #1380. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 D.pseudoobscura:194

F6X3X4              	100.00%		Q29BV6              	100.00%
                    	       		Q29EA7              	6.69%
Bootstrap support for F6X3X4 as seed ortholog is 100%.
Bootstrap support for Q29BV6 as seed ortholog is 100%.

Group of orthologs #1381. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 D.pseudoobscura:77

H2XQH0              	100.00%		Q2LZ65              	100.00%
F6ZRC6              	8.00%		
Bootstrap support for H2XQH0 as seed ortholog is 99%.
Bootstrap support for Q2LZ65 as seed ortholog is 99%.

Group of orthologs #1382. Best score 355 bits
Score difference with first non-orthologous sequence - C.intestinalis:355 D.pseudoobscura:355

F7B3X8              	100.00%		Q29AI1              	100.00%
Bootstrap support for F7B3X8 as seed ortholog is 100%.
Bootstrap support for Q29AI1 as seed ortholog is 100%.

Group of orthologs #1383. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:354 D.pseudoobscura:354

F6UP98              	100.00%		Q28WK3              	100.00%
Bootstrap support for F6UP98 as seed ortholog is 100%.
Bootstrap support for Q28WK3 as seed ortholog is 100%.

Group of orthologs #1384. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 D.pseudoobscura:214

F6WTM4              	100.00%		Q29BV7              	100.00%
Bootstrap support for F6WTM4 as seed ortholog is 100%.
Bootstrap support for Q29BV7 as seed ortholog is 100%.

Group of orthologs #1385. Best score 354 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 D.pseudoobscura:354

H2XZ54              	100.00%		Q29K78              	100.00%
Bootstrap support for H2XZ54 as seed ortholog is 100%.
Bootstrap support for Q29K78 as seed ortholog is 100%.

Group of orthologs #1386. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 D.pseudoobscura:353

F6PHT6              	100.00%		B5DPH6              	100.00%
Bootstrap support for F6PHT6 as seed ortholog is 100%.
Bootstrap support for B5DPH6 as seed ortholog is 100%.

Group of orthologs #1387. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 D.pseudoobscura:353

F6TYL9              	100.00%		Q29I03              	100.00%
Bootstrap support for F6TYL9 as seed ortholog is 91%.
Bootstrap support for Q29I03 as seed ortholog is 100%.

Group of orthologs #1388. Best score 353 bits
Score difference with first non-orthologous sequence - C.intestinalis:353 D.pseudoobscura:202

F6XX66              	100.00%		Q29I19              	100.00%
Bootstrap support for F6XX66 as seed ortholog is 100%.
Bootstrap support for Q29I19 as seed ortholog is 100%.

Group of orthologs #1389. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 D.pseudoobscura:125

F6SZT6              	100.00%		Q29PK4              	100.00%
F6V5Q8              	12.78%		Q2M169              	6.37%
Bootstrap support for F6SZT6 as seed ortholog is 100%.
Bootstrap support for Q29PK4 as seed ortholog is 99%.

Group of orthologs #1390. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 D.pseudoobscura:222

F6VFZ2              	100.00%		Q29BV8              	100.00%
                    	       		B5DJV3              	11.38%
Bootstrap support for F6VFZ2 as seed ortholog is 100%.
Bootstrap support for Q29BV8 as seed ortholog is 100%.

Group of orthologs #1391. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 D.pseudoobscura:352

F6PSM8              	100.00%		Q28XR1              	100.00%
Bootstrap support for F6PSM8 as seed ortholog is 100%.
Bootstrap support for Q28XR1 as seed ortholog is 100%.

Group of orthologs #1392. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 D.pseudoobscura:182

F6SWB6              	100.00%		Q290M8              	100.00%
Bootstrap support for F6SWB6 as seed ortholog is 100%.
Bootstrap support for Q290M8 as seed ortholog is 99%.

Group of orthologs #1393. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 D.pseudoobscura:352

H2XP55              	100.00%		Q295U5              	100.00%
Bootstrap support for H2XP55 as seed ortholog is 100%.
Bootstrap support for Q295U5 as seed ortholog is 100%.

Group of orthologs #1394. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 D.pseudoobscura:352

F6YEQ8              	100.00%		Q2M039              	100.00%
Bootstrap support for F6YEQ8 as seed ortholog is 100%.
Bootstrap support for Q2M039 as seed ortholog is 100%.

Group of orthologs #1395. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 D.pseudoobscura:352

F6YH10              	100.00%		Q2M0U8              	100.00%
Bootstrap support for F6YH10 as seed ortholog is 100%.
Bootstrap support for Q2M0U8 as seed ortholog is 100%.

Group of orthologs #1396. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 D.pseudoobscura:168

H2Y1B2              	100.00%		Q292Z1              	100.00%
Bootstrap support for H2Y1B2 as seed ortholog is 100%.
Bootstrap support for Q292Z1 as seed ortholog is 100%.

Group of orthologs #1397. Best score 352 bits
Score difference with first non-orthologous sequence - C.intestinalis:352 D.pseudoobscura:352

H2XYQ2              	100.00%		Q29EX4              	100.00%
Bootstrap support for H2XYQ2 as seed ortholog is 100%.
Bootstrap support for Q29EX4 as seed ortholog is 100%.

Group of orthologs #1398. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:351 D.pseudoobscura:351

F6ZF50              	100.00%		Q29JK4              	100.00%
                    	       		B5DRU9              	17.74%
Bootstrap support for F6ZF50 as seed ortholog is 100%.
Bootstrap support for Q29JK4 as seed ortholog is 100%.

Group of orthologs #1399. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 D.pseudoobscura:351

F6TZ34              	100.00%		B5DVN2              	100.00%
Bootstrap support for F6TZ34 as seed ortholog is 100%.
Bootstrap support for B5DVN2 as seed ortholog is 100%.

Group of orthologs #1400. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 D.pseudoobscura:138

F6QQK4              	100.00%		Q29IK3              	100.00%
Bootstrap support for F6QQK4 as seed ortholog is 99%.
Bootstrap support for Q29IK3 as seed ortholog is 99%.

Group of orthologs #1401. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:120

F6WDR9              	100.00%		Q299T8              	100.00%
Bootstrap support for F6WDR9 as seed ortholog is 99%.
Bootstrap support for Q299T8 as seed ortholog is 98%.

Group of orthologs #1402. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 D.pseudoobscura:198

F6R3W0              	100.00%		Q29N73              	100.00%
Bootstrap support for F6R3W0 as seed ortholog is 100%.
Bootstrap support for Q29N73 as seed ortholog is 100%.

Group of orthologs #1403. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 D.pseudoobscura:112

F6T8Y3              	100.00%		Q29P79              	100.00%
Bootstrap support for F6T8Y3 as seed ortholog is 100%.
Bootstrap support for Q29P79 as seed ortholog is 99%.

Group of orthologs #1404. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 D.pseudoobscura:210

F7AKB5              	100.00%		Q29BD1              	100.00%
Bootstrap support for F7AKB5 as seed ortholog is 100%.
Bootstrap support for Q29BD1 as seed ortholog is 100%.

Group of orthologs #1405. Best score 351 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 D.pseudoobscura:351

Q1RL34              	100.00%		Q298C7              	100.00%
Bootstrap support for Q1RL34 as seed ortholog is 99%.
Bootstrap support for Q298C7 as seed ortholog is 100%.

Group of orthologs #1406. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 D.pseudoobscura:113

F6PW95              	100.00%		B5DRZ9              	100.00%
Bootstrap support for F6PW95 as seed ortholog is 100%.
Bootstrap support for B5DRZ9 as seed ortholog is 99%.

Group of orthologs #1407. Best score 350 bits
Score difference with first non-orthologous sequence - C.intestinalis:350 D.pseudoobscura:253

F6SP32              	100.00%		Q28XR8              	100.00%
Bootstrap support for F6SP32 as seed ortholog is 100%.
Bootstrap support for Q28XR8 as seed ortholog is 100%.

Group of orthologs #1408. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 D.pseudoobscura:349

F7B065              	100.00%		Q2M1B1              	100.00%
                    	       		Q2M1B2              	18.95%
Bootstrap support for F7B065 as seed ortholog is 100%.
Bootstrap support for Q2M1B1 as seed ortholog is 100%.

Group of orthologs #1409. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 D.pseudoobscura:70

F6R589              	100.00%		Q28ZI4              	100.00%
Bootstrap support for F6R589 as seed ortholog is 100%.
Bootstrap support for Q28ZI4 as seed ortholog is 99%.

Group of orthologs #1410. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 D.pseudoobscura:349

F6S360              	100.00%		Q29BE1              	100.00%
Bootstrap support for F6S360 as seed ortholog is 100%.
Bootstrap support for Q29BE1 as seed ortholog is 100%.

Group of orthologs #1411. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 D.pseudoobscura:349

F6VXD0              	100.00%		Q297T4              	100.00%
Bootstrap support for F6VXD0 as seed ortholog is 100%.
Bootstrap support for Q297T4 as seed ortholog is 100%.

Group of orthologs #1412. Best score 349 bits
Score difference with first non-orthologous sequence - C.intestinalis:349 D.pseudoobscura:349

F6TTJ7              	100.00%		Q29GM0              	100.00%
Bootstrap support for F6TTJ7 as seed ortholog is 100%.
Bootstrap support for Q29GM0 as seed ortholog is 100%.

Group of orthologs #1413. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:21 D.pseudoobscura:223

F6YBW0              	100.00%		Q29LG1              	100.00%
                    	       		Q29E40              	22.28%
Bootstrap support for F6YBW0 as seed ortholog is 78%.
Bootstrap support for Q29LG1 as seed ortholog is 100%.

Group of orthologs #1414. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 D.pseudoobscura:348

H2XYB4              	100.00%		B5E1L7              	100.00%
                    	       		B5DR08              	86.65%
Bootstrap support for H2XYB4 as seed ortholog is 100%.
Bootstrap support for B5E1L7 as seed ortholog is 100%.

Group of orthologs #1415. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 D.pseudoobscura:348

F6S4U2              	100.00%		B5DWM0              	100.00%
Bootstrap support for F6S4U2 as seed ortholog is 100%.
Bootstrap support for B5DWM0 as seed ortholog is 100%.

Group of orthologs #1416. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:348 D.pseudoobscura:348

F6VBG8              	100.00%		Q29BT3              	100.00%
Bootstrap support for F6VBG8 as seed ortholog is 100%.
Bootstrap support for Q29BT3 as seed ortholog is 100%.

Group of orthologs #1417. Best score 348 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 D.pseudoobscura:110

F7A8Z2              	100.00%		Q29G68              	100.00%
Bootstrap support for F7A8Z2 as seed ortholog is 99%.
Bootstrap support for Q29G68 as seed ortholog is 99%.

Group of orthologs #1418. Best score 347 bits
Score difference with first non-orthologous sequence - C.intestinalis:347 D.pseudoobscura:347

F6V6R4              	100.00%		B5DRX3              	100.00%
Bootstrap support for F6V6R4 as seed ortholog is 100%.
Bootstrap support for B5DRX3 as seed ortholog is 100%.

Group of orthologs #1419. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 D.pseudoobscura:346

F6XKA8              	100.00%		Q2M141              	100.00%
                    	       		B5DMY1              	34.42%
Bootstrap support for F6XKA8 as seed ortholog is 100%.
Bootstrap support for Q2M141 as seed ortholog is 100%.

Group of orthologs #1420. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 D.pseudoobscura:346

F6U7Z2              	100.00%		Q29M58              	100.00%
Bootstrap support for F6U7Z2 as seed ortholog is 100%.
Bootstrap support for Q29M58 as seed ortholog is 100%.

Group of orthologs #1421. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 D.pseudoobscura:61

F6ZL94              	100.00%		Q29F44              	100.00%
Bootstrap support for F6ZL94 as seed ortholog is 100%.
Bootstrap support for Q29F44 as seed ortholog is 97%.

Group of orthologs #1422. Best score 346 bits
Score difference with first non-orthologous sequence - C.intestinalis:346 D.pseudoobscura:346

F6Z188              	100.00%		Q29PN4              	100.00%
Bootstrap support for F6Z188 as seed ortholog is 100%.
Bootstrap support for Q29PN4 as seed ortholog is 100%.

Group of orthologs #1423. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 D.pseudoobscura:345

F6VWH1              	100.00%		Q5NDL5              	100.00%
F7AK09              	5.35%		
Bootstrap support for F6VWH1 as seed ortholog is 100%.
Bootstrap support for Q5NDL5 as seed ortholog is 100%.

Group of orthologs #1424. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 D.pseudoobscura:120

H2XRB5              	100.00%		Q294G0              	100.00%
F6U8G8              	19.48%		
Bootstrap support for H2XRB5 as seed ortholog is 100%.
Bootstrap support for Q294G0 as seed ortholog is 99%.

Group of orthologs #1425. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 D.pseudoobscura:345

F6YSL9              	100.00%		Q291G7              	100.00%
Bootstrap support for F6YSL9 as seed ortholog is 100%.
Bootstrap support for Q291G7 as seed ortholog is 100%.

Group of orthologs #1426. Best score 345 bits
Score difference with first non-orthologous sequence - C.intestinalis:345 D.pseudoobscura:345

F7ATT1              	100.00%		Q29G67              	100.00%
Bootstrap support for F7ATT1 as seed ortholog is 100%.
Bootstrap support for Q29G67 as seed ortholog is 100%.

Group of orthologs #1427. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 D.pseudoobscura:70

F6Z4W7              	100.00%		B5DU57              	100.00%
                    	       		Q299Y6              	100.00%
Bootstrap support for F6Z4W7 as seed ortholog is 100%.
Bootstrap support for B5DU57 as seed ortholog is 97%.
Bootstrap support for Q299Y6 as seed ortholog is 97%.

Group of orthologs #1428. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 D.pseudoobscura:87

F6T0J5              	100.00%		Q29GE7              	100.00%
                    	       		B5DHA3              	59.59%
Bootstrap support for F6T0J5 as seed ortholog is 100%.
Bootstrap support for Q29GE7 as seed ortholog is 99%.

Group of orthologs #1429. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 D.pseudoobscura:344

F6TLX8              	100.00%		B5DPB6              	100.00%
Bootstrap support for F6TLX8 as seed ortholog is 100%.
Bootstrap support for B5DPB6 as seed ortholog is 100%.

Group of orthologs #1430. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 D.pseudoobscura:344

F6T6E4              	100.00%		Q293V3              	100.00%
Bootstrap support for F6T6E4 as seed ortholog is 100%.
Bootstrap support for Q293V3 as seed ortholog is 100%.

Group of orthologs #1431. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 D.pseudoobscura:113

F6Z2G5              	100.00%		B5DZ00              	100.00%
Bootstrap support for F6Z2G5 as seed ortholog is 100%.
Bootstrap support for B5DZ00 as seed ortholog is 99%.

Group of orthologs #1432. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 D.pseudoobscura:344

F6Q989              	100.00%		Q29LX0              	100.00%
Bootstrap support for F6Q989 as seed ortholog is 100%.
Bootstrap support for Q29LX0 as seed ortholog is 100%.

Group of orthologs #1433. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 D.pseudoobscura:344

F6QAP0              	100.00%		Q29M45              	100.00%
Bootstrap support for F6QAP0 as seed ortholog is 100%.
Bootstrap support for Q29M45 as seed ortholog is 100%.

Group of orthologs #1434. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:174

F6XCQ7              	100.00%		Q296V6              	100.00%
Bootstrap support for F6XCQ7 as seed ortholog is 100%.
Bootstrap support for Q296V6 as seed ortholog is 100%.

Group of orthologs #1435. Best score 344 bits
Score difference with first non-orthologous sequence - C.intestinalis:344 D.pseudoobscura:224

F6ZU35              	100.00%		Q29NI9              	100.00%
Bootstrap support for F6ZU35 as seed ortholog is 100%.
Bootstrap support for Q29NI9 as seed ortholog is 100%.

Group of orthologs #1436. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 D.pseudoobscura:343

F6Z2I4              	100.00%		B5DME8              	100.00%
                    	       		B5DYN2              	10.51%
Bootstrap support for F6Z2I4 as seed ortholog is 100%.
Bootstrap support for B5DME8 as seed ortholog is 100%.

Group of orthologs #1437. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 D.pseudoobscura:343

F7ADD9              	100.00%		B5DQN2              	100.00%
Bootstrap support for F7ADD9 as seed ortholog is 100%.
Bootstrap support for B5DQN2 as seed ortholog is 100%.

Group of orthologs #1438. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:343 D.pseudoobscura:343

F7AXE7              	100.00%		B5DQU2              	100.00%
Bootstrap support for F7AXE7 as seed ortholog is 100%.
Bootstrap support for B5DQU2 as seed ortholog is 100%.

Group of orthologs #1439. Best score 343 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 D.pseudoobscura:239

H2XY03              	100.00%		Q29M32              	100.00%
Bootstrap support for H2XY03 as seed ortholog is 100%.
Bootstrap support for Q29M32 as seed ortholog is 100%.

Group of orthologs #1440. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 D.pseudoobscura:342

F7BLL7              	100.00%		B5DH41              	100.00%
                    	       		Q295T2              	26.55%
Bootstrap support for F7BLL7 as seed ortholog is 100%.
Bootstrap support for B5DH41 as seed ortholog is 100%.

Group of orthologs #1441. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 D.pseudoobscura:342

F6Z4F9              	100.00%		B5DNH9              	100.00%
Bootstrap support for F6Z4F9 as seed ortholog is 100%.
Bootstrap support for B5DNH9 as seed ortholog is 100%.

Group of orthologs #1442. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 D.pseudoobscura:112

F6SKG8              	100.00%		Q29F35              	100.00%
Bootstrap support for F6SKG8 as seed ortholog is 100%.
Bootstrap support for Q29F35 as seed ortholog is 99%.

Group of orthologs #1443. Best score 342 bits
Score difference with first non-orthologous sequence - C.intestinalis:342 D.pseudoobscura:342

H2XTB0              	100.00%		Q29J14              	100.00%
Bootstrap support for H2XTB0 as seed ortholog is 100%.
Bootstrap support for Q29J14 as seed ortholog is 100%.

Group of orthologs #1444. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 D.pseudoobscura:341

F6VDU4              	100.00%		Q29LQ7              	100.00%
H2XRS2              	21.23%		Q28Y01              	25.70%
F6U734              	20.57%		Q29C99              	24.07%
Bootstrap support for F6VDU4 as seed ortholog is 92%.
Bootstrap support for Q29LQ7 as seed ortholog is 100%.

Group of orthologs #1445. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 D.pseudoobscura:341

F6X034              	100.00%		Q294I2              	100.00%
Bootstrap support for F6X034 as seed ortholog is 100%.
Bootstrap support for Q294I2 as seed ortholog is 100%.

Group of orthologs #1446. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 D.pseudoobscura:341

Q1RL77              	100.00%		B5DPR7              	100.00%
Bootstrap support for Q1RL77 as seed ortholog is 100%.
Bootstrap support for B5DPR7 as seed ortholog is 100%.

Group of orthologs #1447. Best score 341 bits
Score difference with first non-orthologous sequence - C.intestinalis:341 D.pseudoobscura:45

F7AMR5              	100.00%		Q29I22              	100.00%
Bootstrap support for F7AMR5 as seed ortholog is 100%.
Bootstrap support for Q29I22 as seed ortholog is 97%.

Group of orthologs #1448. Best score 340 bits
Score difference with first non-orthologous sequence - C.intestinalis:340 D.pseudoobscura:340

F6QQ49              	100.00%		Q29IU1              	100.00%
Bootstrap support for F6QQ49 as seed ortholog is 100%.
Bootstrap support for Q29IU1 as seed ortholog is 100%.

Group of orthologs #1449. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 D.pseudoobscura:339

F6WYT3              	100.00%		Q299W5              	100.00%
H2XRA0              	5.88%		B5DUQ5              	75.08%
Bootstrap support for F6WYT3 as seed ortholog is 100%.
Bootstrap support for Q299W5 as seed ortholog is 100%.

Group of orthologs #1450. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 D.pseudoobscura:151

F7BAF2              	100.00%		Q2LZ10              	100.00%
F6VIT0              	6.31%		
F6QB79              	6.06%		
Bootstrap support for F7BAF2 as seed ortholog is 77%.
Bootstrap support for Q2LZ10 as seed ortholog is 99%.

Group of orthologs #1451. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 D.pseudoobscura:177

F6U019              	100.00%		Q29EE6              	100.00%
                    	       		B5DMF9              	8.18%
Bootstrap support for F6U019 as seed ortholog is 100%.
Bootstrap support for Q29EE6 as seed ortholog is 100%.

Group of orthologs #1452. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:339

Q8I7E2              	100.00%		Q29NI8              	100.00%
                    	       		B5DHI3              	15.48%
Bootstrap support for Q8I7E2 as seed ortholog is 100%.
Bootstrap support for Q29NI8 as seed ortholog is 100%.

Group of orthologs #1453. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 D.pseudoobscura:339

F6PWD4              	100.00%		Q298M0              	100.00%
Bootstrap support for F6PWD4 as seed ortholog is 100%.
Bootstrap support for Q298M0 as seed ortholog is 100%.

Group of orthologs #1454. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 D.pseudoobscura:339

F6VZQ1              	100.00%		Q28YL3              	100.00%
Bootstrap support for F6VZQ1 as seed ortholog is 99%.
Bootstrap support for Q28YL3 as seed ortholog is 100%.

Group of orthologs #1455. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 D.pseudoobscura:339

H2XN47              	100.00%		Q28XB4              	100.00%
Bootstrap support for H2XN47 as seed ortholog is 100%.
Bootstrap support for Q28XB4 as seed ortholog is 100%.

Group of orthologs #1456. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 D.pseudoobscura:339

F6VUN5              	100.00%		Q2M087              	100.00%
Bootstrap support for F6VUN5 as seed ortholog is 99%.
Bootstrap support for Q2M087 as seed ortholog is 100%.

Group of orthologs #1457. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 D.pseudoobscura:339

F6ZS04              	100.00%		Q29M95              	100.00%
Bootstrap support for F6ZS04 as seed ortholog is 100%.
Bootstrap support for Q29M95 as seed ortholog is 100%.

Group of orthologs #1458. Best score 339 bits
Score difference with first non-orthologous sequence - C.intestinalis:339 D.pseudoobscura:339

H2XME0              	100.00%		Q29I53              	100.00%
Bootstrap support for H2XME0 as seed ortholog is 100%.
Bootstrap support for Q29I53 as seed ortholog is 100%.

Group of orthologs #1459. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 D.pseudoobscura:54

F6ZUD7              	100.00%		B5DHP7              	100.00%
                    	       		Q2LZY8              	8.96%
Bootstrap support for F6ZUD7 as seed ortholog is 100%.
Bootstrap support for B5DHP7 as seed ortholog is 91%.

Group of orthologs #1460. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 D.pseudoobscura:338

Q4H2R0              	100.00%		B5DVV3              	100.00%
Bootstrap support for Q4H2R0 as seed ortholog is 99%.
Bootstrap support for B5DVV3 as seed ortholog is 100%.

Group of orthologs #1461. Best score 338 bits
Score difference with first non-orthologous sequence - C.intestinalis:338 D.pseudoobscura:338

Q1RLA5              	100.00%		Q29NX1              	100.00%
Bootstrap support for Q1RLA5 as seed ortholog is 100%.
Bootstrap support for Q29NX1 as seed ortholog is 100%.

Group of orthologs #1462. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 D.pseudoobscura:337

F6WAG8              	100.00%		Q28XY6              	100.00%
Bootstrap support for F6WAG8 as seed ortholog is 100%.
Bootstrap support for Q28XY6 as seed ortholog is 100%.

Group of orthologs #1463. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 D.pseudoobscura:214

F6Y437              	100.00%		I5APY5              	100.00%
Bootstrap support for F6Y437 as seed ortholog is 100%.
Bootstrap support for I5APY5 as seed ortholog is 100%.

Group of orthologs #1464. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 D.pseudoobscura:337

F6Q909              	100.00%		Q2M010              	100.00%
Bootstrap support for F6Q909 as seed ortholog is 100%.
Bootstrap support for Q2M010 as seed ortholog is 100%.

Group of orthologs #1465. Best score 337 bits
Score difference with first non-orthologous sequence - C.intestinalis:337 D.pseudoobscura:337

F6ZBD0              	100.00%		Q29NL4              	100.00%
Bootstrap support for F6ZBD0 as seed ortholog is 100%.
Bootstrap support for Q29NL4 as seed ortholog is 100%.

Group of orthologs #1466. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 D.pseudoobscura:188

H2XQI0              	100.00%		B5DUN5              	100.00%
F7AD70              	21.70%		B5DH82              	99.65%
Bootstrap support for H2XQI0 as seed ortholog is 100%.
Bootstrap support for B5DUN5 as seed ortholog is 99%.

Group of orthologs #1467. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 D.pseudoobscura:336

H2XZC1              	100.00%		B5DUH8              	100.00%
                    	       		B5DUH6              	97.76%
Bootstrap support for H2XZC1 as seed ortholog is 100%.
Bootstrap support for B5DUH8 as seed ortholog is 100%.

Group of orthologs #1468. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 D.pseudoobscura:213

F6XT60              	100.00%		B5DUQ0              	100.00%
Bootstrap support for F6XT60 as seed ortholog is 100%.
Bootstrap support for B5DUQ0 as seed ortholog is 100%.

Group of orthologs #1469. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 D.pseudoobscura:336

F6SSU2              	100.00%		Q29A66              	100.00%
Bootstrap support for F6SSU2 as seed ortholog is 100%.
Bootstrap support for Q29A66 as seed ortholog is 100%.

Group of orthologs #1470. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 D.pseudoobscura:336

F6UJ17              	100.00%		Q295D0              	100.00%
Bootstrap support for F6UJ17 as seed ortholog is 100%.
Bootstrap support for Q295D0 as seed ortholog is 100%.

Group of orthologs #1471. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 D.pseudoobscura:336

F6QIP6              	100.00%		Q29K29              	100.00%
Bootstrap support for F6QIP6 as seed ortholog is 100%.
Bootstrap support for Q29K29 as seed ortholog is 100%.

Group of orthologs #1472. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 D.pseudoobscura:259

F6RRI2              	100.00%		Q2LYY5              	100.00%
Bootstrap support for F6RRI2 as seed ortholog is 99%.
Bootstrap support for Q2LYY5 as seed ortholog is 100%.

Group of orthologs #1473. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 D.pseudoobscura:117

H2XL87              	100.00%		Q29B06              	100.00%
Bootstrap support for H2XL87 as seed ortholog is 100%.
Bootstrap support for Q29B06 as seed ortholog is 100%.

Group of orthologs #1474. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 D.pseudoobscura:71

H2XS14              	100.00%		Q29A20              	100.00%
Bootstrap support for H2XS14 as seed ortholog is 100%.
Bootstrap support for Q29A20 as seed ortholog is 99%.

Group of orthologs #1475. Best score 336 bits
Score difference with first non-orthologous sequence - C.intestinalis:336 D.pseudoobscura:336

F7BP62              	100.00%		Q29IT9              	100.00%
Bootstrap support for F7BP62 as seed ortholog is 100%.
Bootstrap support for Q29IT9 as seed ortholog is 100%.

Group of orthologs #1476. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 D.pseudoobscura:278

F7AUM2              	100.00%		Q29E87              	100.00%
                    	       		B5DP50              	16.09%
                    	       		B5DP49              	13.79%
Bootstrap support for F7AUM2 as seed ortholog is 100%.
Bootstrap support for Q29E87 as seed ortholog is 100%.

Group of orthologs #1477. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 D.pseudoobscura:335

F6UNA3              	100.00%		Q29HM2              	100.00%
F6QH95              	14.18%		
Bootstrap support for F6UNA3 as seed ortholog is 100%.
Bootstrap support for Q29HM2 as seed ortholog is 100%.

Group of orthologs #1478. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 D.pseudoobscura:335

F6W713              	100.00%		B5DX75              	100.00%
Bootstrap support for F6W713 as seed ortholog is 100%.
Bootstrap support for B5DX75 as seed ortholog is 100%.

Group of orthologs #1479. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 D.pseudoobscura:335

F6UZR0              	100.00%		Q2LYV8              	100.00%
Bootstrap support for F6UZR0 as seed ortholog is 100%.
Bootstrap support for Q2LYV8 as seed ortholog is 100%.

Group of orthologs #1480. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 D.pseudoobscura:335

H2XNG1              	100.00%		Q2M0L4              	100.00%
Bootstrap support for H2XNG1 as seed ortholog is 100%.
Bootstrap support for Q2M0L4 as seed ortholog is 100%.

Group of orthologs #1481. Best score 335 bits
Score difference with first non-orthologous sequence - C.intestinalis:335 D.pseudoobscura:335

H2Y3Q6              	100.00%		Q29KR0              	100.00%
Bootstrap support for H2Y3Q6 as seed ortholog is 100%.
Bootstrap support for Q29KR0 as seed ortholog is 100%.

Group of orthologs #1482. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 D.pseudoobscura:152

Q4H3K6              	100.00%		Q293W0              	100.00%
F6QQF5              	85.15%		B5DX82              	99.56%
Bootstrap support for Q4H3K6 as seed ortholog is 81%.
Bootstrap support for Q293W0 as seed ortholog is 99%.

Group of orthologs #1483. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 D.pseudoobscura:197

F6RCT7              	100.00%		Q291B2              	100.00%
Bootstrap support for F6RCT7 as seed ortholog is 99%.
Bootstrap support for Q291B2 as seed ortholog is 100%.

Group of orthologs #1484. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 D.pseudoobscura:334

F6S8B5              	100.00%		Q290U0              	100.00%
Bootstrap support for F6S8B5 as seed ortholog is 100%.
Bootstrap support for Q290U0 as seed ortholog is 100%.

Group of orthologs #1485. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 D.pseudoobscura:334

F6T7E5              	100.00%		Q28ZG4              	100.00%
Bootstrap support for F6T7E5 as seed ortholog is 100%.
Bootstrap support for Q28ZG4 as seed ortholog is 100%.

Group of orthologs #1486. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 D.pseudoobscura:334

F6WYV6              	100.00%		Q29JA2              	100.00%
Bootstrap support for F6WYV6 as seed ortholog is 100%.
Bootstrap support for Q29JA2 as seed ortholog is 100%.

Group of orthologs #1487. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 D.pseudoobscura:334

Q1RL93              	100.00%		B5DXC3              	100.00%
Bootstrap support for Q1RL93 as seed ortholog is 100%.
Bootstrap support for B5DXC3 as seed ortholog is 100%.

Group of orthologs #1488. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 D.pseudoobscura:117

Q7YT82              	100.00%		B5DZ84              	100.00%
Bootstrap support for Q7YT82 as seed ortholog is 100%.
Bootstrap support for B5DZ84 as seed ortholog is 100%.

Group of orthologs #1489. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 D.pseudoobscura:334

H2XU61              	100.00%		Q29HY1              	100.00%
Bootstrap support for H2XU61 as seed ortholog is 100%.
Bootstrap support for Q29HY1 as seed ortholog is 100%.

Group of orthologs #1490. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 D.pseudoobscura:65

H2XVD5              	100.00%		Q2M187              	100.00%
Bootstrap support for H2XVD5 as seed ortholog is 100%.
Bootstrap support for Q2M187 as seed ortholog is 99%.

Group of orthologs #1491. Best score 334 bits
Score difference with first non-orthologous sequence - C.intestinalis:334 D.pseudoobscura:334

H2Y1I7              	100.00%		Q29PC0              	100.00%
Bootstrap support for H2Y1I7 as seed ortholog is 100%.
Bootstrap support for Q29PC0 as seed ortholog is 100%.

Group of orthologs #1492. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 D.pseudoobscura:138

F6Q9M9              	100.00%		Q29DW3              	100.00%
                    	       		Q29DW4              	55.17%
                    	       		Q29KD6              	17.41%
Bootstrap support for F6Q9M9 as seed ortholog is 100%.
Bootstrap support for Q29DW3 as seed ortholog is 99%.

Group of orthologs #1493. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 D.pseudoobscura:333

F6SUA6              	100.00%		Q290X7              	100.00%
Bootstrap support for F6SUA6 as seed ortholog is 99%.
Bootstrap support for Q290X7 as seed ortholog is 100%.

Group of orthologs #1494. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 D.pseudoobscura:333

F6VH85              	100.00%		Q299D7              	100.00%
Bootstrap support for F6VH85 as seed ortholog is 100%.
Bootstrap support for Q299D7 as seed ortholog is 100%.

Group of orthologs #1495. Best score 333 bits
Score difference with first non-orthologous sequence - C.intestinalis:333 D.pseudoobscura:333

F6YUB3              	100.00%		Q2LYW0              	100.00%
Bootstrap support for F6YUB3 as seed ortholog is 100%.
Bootstrap support for Q2LYW0 as seed ortholog is 100%.

Group of orthologs #1496. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 D.pseudoobscura:89

F6XMI0              	100.00%		B5DKZ7              	100.00%
Bootstrap support for F6XMI0 as seed ortholog is 100%.
Bootstrap support for B5DKZ7 as seed ortholog is 99%.

Group of orthologs #1497. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 D.pseudoobscura:332

F6QAA1              	100.00%		Q29KL3              	100.00%
Bootstrap support for F6QAA1 as seed ortholog is 100%.
Bootstrap support for Q29KL3 as seed ortholog is 100%.

Group of orthologs #1498. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 D.pseudoobscura:332

F6UPC7              	100.00%		Q29DY4              	100.00%
Bootstrap support for F6UPC7 as seed ortholog is 100%.
Bootstrap support for Q29DY4 as seed ortholog is 100%.

Group of orthologs #1499. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 D.pseudoobscura:332

F7AX33              	100.00%		Q28X18              	100.00%
Bootstrap support for F7AX33 as seed ortholog is 100%.
Bootstrap support for Q28X18 as seed ortholog is 100%.

Group of orthologs #1500. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 D.pseudoobscura:332

F6ZTE1              	100.00%		Q297T0              	100.00%
Bootstrap support for F6ZTE1 as seed ortholog is 100%.
Bootstrap support for Q297T0 as seed ortholog is 100%.

Group of orthologs #1501. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 D.pseudoobscura:332

H2Y2E8              	100.00%		Q28ZT2              	100.00%
Bootstrap support for H2Y2E8 as seed ortholog is 100%.
Bootstrap support for Q28ZT2 as seed ortholog is 100%.

Group of orthologs #1502. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 D.pseudoobscura:271

H2XX49              	100.00%		Q29FN1              	100.00%
Bootstrap support for H2XX49 as seed ortholog is 100%.
Bootstrap support for Q29FN1 as seed ortholog is 100%.

Group of orthologs #1503. Best score 332 bits
Score difference with first non-orthologous sequence - C.intestinalis:332 D.pseudoobscura:332

Q67EQ6              	100.00%		Q8I1B4              	100.00%
Bootstrap support for Q67EQ6 as seed ortholog is 100%.
Bootstrap support for Q8I1B4 as seed ortholog is 100%.

Group of orthologs #1504. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 D.pseudoobscura:93

H2XQB4              	100.00%		B5DVH8              	100.00%
                    	       		B5DWB0              	17.95%
                    	       		Q29JY5              	7.54%
                    	       		Q294N3              	5.29%
Bootstrap support for H2XQB4 as seed ortholog is 100%.
Bootstrap support for B5DVH8 as seed ortholog is 92%.

Group of orthologs #1505. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 D.pseudoobscura:331

F6PT55              	100.00%		B5DR94              	100.00%
Bootstrap support for F6PT55 as seed ortholog is 100%.
Bootstrap support for B5DR94 as seed ortholog is 100%.

Group of orthologs #1506. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 D.pseudoobscura:331

F6WWX5              	100.00%		B5DPB0              	100.00%
Bootstrap support for F6WWX5 as seed ortholog is 100%.
Bootstrap support for B5DPB0 as seed ortholog is 100%.

Group of orthologs #1507. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 D.pseudoobscura:331

F6R3U4              	100.00%		Q28Z53              	100.00%
Bootstrap support for F6R3U4 as seed ortholog is 43%.
Alternative seed ortholog is F6XTD6 (30 bits away from this cluster)
Bootstrap support for Q28Z53 as seed ortholog is 100%.

Group of orthologs #1508. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 D.pseudoobscura:331

F6SZ48              	100.00%		I5AN47              	100.00%
Bootstrap support for F6SZ48 as seed ortholog is 82%.
Bootstrap support for I5AN47 as seed ortholog is 100%.

Group of orthologs #1509. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 D.pseudoobscura:331

F6TFE2              	100.00%		Q295H9              	100.00%
Bootstrap support for F6TFE2 as seed ortholog is 100%.
Bootstrap support for Q295H9 as seed ortholog is 100%.

Group of orthologs #1510. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 D.pseudoobscura:284

F6ZP02              	100.00%		Q28XW5              	100.00%
Bootstrap support for F6ZP02 as seed ortholog is 100%.
Bootstrap support for Q28XW5 as seed ortholog is 100%.

Group of orthologs #1511. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:331

F7BFD3              	100.00%		I5ANA3              	100.00%
Bootstrap support for F7BFD3 as seed ortholog is 99%.
Bootstrap support for I5ANA3 as seed ortholog is 100%.

Group of orthologs #1512. Best score 331 bits
Score difference with first non-orthologous sequence - C.intestinalis:331 D.pseudoobscura:331

F6YA95              	100.00%		Q2LYM6              	100.00%
Bootstrap support for F6YA95 as seed ortholog is 100%.
Bootstrap support for Q2LYM6 as seed ortholog is 100%.

Group of orthologs #1513. Best score 330 bits
Score difference with first non-orthologous sequence - C.intestinalis:330 D.pseudoobscura:330

F6Q8V8              	100.00%		B5DMG1              	100.00%
                    	       		Q296J5              	30.51%
Bootstrap support for F6Q8V8 as seed ortholog is 100%.
Bootstrap support for B5DMG1 as seed ortholog is 100%.

Group of orthologs #1514. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 D.pseudoobscura:137

F6QHN7              	100.00%		Q29A55              	100.00%
                    	       		I5AN02              	11.93%
Bootstrap support for F6QHN7 as seed ortholog is 72%.
Alternative seed ortholog is F6XQI0 (19 bits away from this cluster)
Bootstrap support for Q29A55 as seed ortholog is 99%.

Group of orthologs #1515. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 D.pseudoobscura:329

F6TZD9              	100.00%		B5DKM0              	100.00%
Bootstrap support for F6TZD9 as seed ortholog is 100%.
Bootstrap support for B5DKM0 as seed ortholog is 100%.

Group of orthologs #1516. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 D.pseudoobscura:329

F6TX35              	100.00%		Q28XI3              	100.00%
Bootstrap support for F6TX35 as seed ortholog is 100%.
Bootstrap support for Q28XI3 as seed ortholog is 100%.

Group of orthologs #1517. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 D.pseudoobscura:329

F6T3V6              	100.00%		Q293K0              	100.00%
Bootstrap support for F6T3V6 as seed ortholog is 100%.
Bootstrap support for Q293K0 as seed ortholog is 100%.

Group of orthologs #1518. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 D.pseudoobscura:283

F6RRF2              	100.00%		Q29BK6              	100.00%
Bootstrap support for F6RRF2 as seed ortholog is 100%.
Bootstrap support for Q29BK6 as seed ortholog is 100%.

Group of orthologs #1519. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 D.pseudoobscura:282

F6QGB1              	100.00%		Q29FG8              	100.00%
Bootstrap support for F6QGB1 as seed ortholog is 100%.
Bootstrap support for Q29FG8 as seed ortholog is 100%.

Group of orthologs #1520. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 D.pseudoobscura:329

F6Z1E3              	100.00%		Q29CU2              	100.00%
Bootstrap support for F6Z1E3 as seed ortholog is 100%.
Bootstrap support for Q29CU2 as seed ortholog is 100%.

Group of orthologs #1521. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 D.pseudoobscura:99

Q1RPW1              	100.00%		B5E0C5              	100.00%
Bootstrap support for Q1RPW1 as seed ortholog is 100%.
Bootstrap support for B5E0C5 as seed ortholog is 99%.

Group of orthologs #1522. Best score 329 bits
Score difference with first non-orthologous sequence - C.intestinalis:329 D.pseudoobscura:329

F7B391              	100.00%		Q29MM8              	100.00%
Bootstrap support for F7B391 as seed ortholog is 100%.
Bootstrap support for Q29MM8 as seed ortholog is 100%.

Group of orthologs #1523. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 D.pseudoobscura:328

F6WY01              	100.00%		Q28XG2              	100.00%
Bootstrap support for F6WY01 as seed ortholog is 100%.
Bootstrap support for Q28XG2 as seed ortholog is 100%.

Group of orthologs #1524. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:328 D.pseudoobscura:328

F6UUI8              	100.00%		Q29DJ3              	100.00%
Bootstrap support for F6UUI8 as seed ortholog is 100%.
Bootstrap support for Q29DJ3 as seed ortholog is 100%.

Group of orthologs #1525. Best score 328 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 D.pseudoobscura:260

F6X4A8              	100.00%		Q29H71              	100.00%
Bootstrap support for F6X4A8 as seed ortholog is 99%.
Bootstrap support for Q29H71 as seed ortholog is 100%.

Group of orthologs #1526. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 D.pseudoobscura:98

F6SSX2              	100.00%		Q29D04              	100.00%
                    	       		B5DV14              	81.45%
                    	       		B5DV15              	78.62%
                    	       		B5DV13              	68.67%
                    	       		B5DTY9              	40.66%
                    	       		B5DTX0              	28.62%
                    	       		B5DS68              	21.01%
                    	       		B5DV06              	17.44%
                    	       		Q2LZJ7              	7.00%
                    	       		B5DJX6              	6.88%
                    	       		Q291T8              	6.88%
                    	       		Q28XX2              	6.76%
                    	       		Q28XX6              	6.27%
                    	       		B5DHL1              	5.77%
Bootstrap support for F6SSX2 as seed ortholog is 100%.
Bootstrap support for Q29D04 as seed ortholog is 99%.

Group of orthologs #1527. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 D.pseudoobscura:154

F6QZY3              	100.00%		Q29BE7              	100.00%
Bootstrap support for F6QZY3 as seed ortholog is 100%.
Bootstrap support for Q29BE7 as seed ortholog is 100%.

Group of orthologs #1528. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 D.pseudoobscura:327

F6ZF56              	100.00%		Q292P1              	100.00%
Bootstrap support for F6ZF56 as seed ortholog is 100%.
Bootstrap support for Q292P1 as seed ortholog is 100%.

Group of orthologs #1529. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 D.pseudoobscura:327

F6YWB6              	100.00%		Q295U7              	100.00%
Bootstrap support for F6YWB6 as seed ortholog is 100%.
Bootstrap support for Q295U7 as seed ortholog is 100%.

Group of orthologs #1530. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 D.pseudoobscura:110

F6YZZ7              	100.00%		Q298M3              	100.00%
Bootstrap support for F6YZZ7 as seed ortholog is 100%.
Bootstrap support for Q298M3 as seed ortholog is 97%.

Group of orthologs #1531. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 D.pseudoobscura:327

H2XQ42              	100.00%		Q28WR3              	100.00%
Bootstrap support for H2XQ42 as seed ortholog is 100%.
Bootstrap support for Q28WR3 as seed ortholog is 100%.

Group of orthologs #1532. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 D.pseudoobscura:327

F7A4T6              	100.00%		Q29ER0              	100.00%
Bootstrap support for F7A4T6 as seed ortholog is 100%.
Bootstrap support for Q29ER0 as seed ortholog is 100%.

Group of orthologs #1533. Best score 327 bits
Score difference with first non-orthologous sequence - C.intestinalis:327 D.pseudoobscura:327

H2XL64              	100.00%		Q298I7              	100.00%
Bootstrap support for H2XL64 as seed ortholog is 100%.
Bootstrap support for Q298I7 as seed ortholog is 100%.

Group of orthologs #1534. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 D.pseudoobscura:326

F6SPI7              	100.00%		B5DXD8              	100.00%
Bootstrap support for F6SPI7 as seed ortholog is 99%.
Bootstrap support for B5DXD8 as seed ortholog is 100%.

Group of orthologs #1535. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 D.pseudoobscura:326

F6T2X1              	100.00%		Q290Y1              	100.00%
Bootstrap support for F6T2X1 as seed ortholog is 100%.
Bootstrap support for Q290Y1 as seed ortholog is 100%.

Group of orthologs #1536. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 D.pseudoobscura:64

F6UK82              	100.00%		Q294C4              	100.00%
Bootstrap support for F6UK82 as seed ortholog is 99%.
Bootstrap support for Q294C4 as seed ortholog is 90%.

Group of orthologs #1537. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 D.pseudoobscura:326

F6SKY6              	100.00%		Q29B09              	100.00%
Bootstrap support for F6SKY6 as seed ortholog is 100%.
Bootstrap support for Q29B09 as seed ortholog is 100%.

Group of orthologs #1538. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 D.pseudoobscura:326

F6VTZ3              	100.00%		Q292P4              	100.00%
Bootstrap support for F6VTZ3 as seed ortholog is 100%.
Bootstrap support for Q292P4 as seed ortholog is 100%.

Group of orthologs #1539. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 D.pseudoobscura:250

F6RBK2              	100.00%		Q29KQ0              	100.00%
Bootstrap support for F6RBK2 as seed ortholog is 100%.
Bootstrap support for Q29KQ0 as seed ortholog is 100%.

Group of orthologs #1540. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:326 D.pseudoobscura:326

F6TUR1              	100.00%		Q29LS1              	100.00%
Bootstrap support for F6TUR1 as seed ortholog is 100%.
Bootstrap support for Q29LS1 as seed ortholog is 100%.

Group of orthologs #1541. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 D.pseudoobscura:153

F6XNC0              	100.00%		Q29JH5              	100.00%
Bootstrap support for F6XNC0 as seed ortholog is 97%.
Bootstrap support for Q29JH5 as seed ortholog is 98%.

Group of orthologs #1542. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 D.pseudoobscura:105

H2Y1F3              	100.00%		Q28WU8              	100.00%
Bootstrap support for H2Y1F3 as seed ortholog is 32%.
Alternative seed ortholog is F6SIL2 (15 bits away from this cluster)
Bootstrap support for Q28WU8 as seed ortholog is 99%.

Group of orthologs #1543. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:326

H2XK75              	100.00%		Q29KL2              	100.00%
Bootstrap support for H2XK75 as seed ortholog is 100%.
Bootstrap support for Q29KL2 as seed ortholog is 100%.

Group of orthologs #1544. Best score 326 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 D.pseudoobscura:212

H2XW45              	100.00%		Q299A4              	100.00%
Bootstrap support for H2XW45 as seed ortholog is 100%.
Bootstrap support for Q299A4 as seed ortholog is 100%.

Group of orthologs #1545. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 D.pseudoobscura:199

F7AX15              	100.00%		Q290S6              	100.00%
                    	       		B5DZG6              	11.37%
Bootstrap support for F7AX15 as seed ortholog is 100%.
Bootstrap support for Q290S6 as seed ortholog is 100%.

Group of orthologs #1546. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 D.pseudoobscura:325

F6S6A5              	100.00%		B5DQN8              	100.00%
Bootstrap support for F6S6A5 as seed ortholog is 100%.
Bootstrap support for B5DQN8 as seed ortholog is 100%.

Group of orthologs #1547. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:116

F6RY16              	100.00%		Q29G03              	100.00%
Bootstrap support for F6RY16 as seed ortholog is 99%.
Bootstrap support for Q29G03 as seed ortholog is 99%.

Group of orthologs #1548. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:325 D.pseudoobscura:325

F6VFM3              	100.00%		Q29CR3              	100.00%
Bootstrap support for F6VFM3 as seed ortholog is 100%.
Bootstrap support for Q29CR3 as seed ortholog is 100%.

Group of orthologs #1549. Best score 325 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 D.pseudoobscura:69

Q4H2U9              	100.00%		Q29J92              	100.00%
Bootstrap support for Q4H2U9 as seed ortholog is 99%.
Bootstrap support for Q29J92 as seed ortholog is 95%.

Group of orthologs #1550. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 D.pseudoobscura:212

F6ZLL3              	100.00%		B5DVQ5              	100.00%
Bootstrap support for F6ZLL3 as seed ortholog is 100%.
Bootstrap support for B5DVQ5 as seed ortholog is 100%.

Group of orthologs #1551. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 D.pseudoobscura:324

F6PY90              	100.00%		Q29KC7              	100.00%
Bootstrap support for F6PY90 as seed ortholog is 100%.
Bootstrap support for Q29KC7 as seed ortholog is 100%.

Group of orthologs #1552. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 D.pseudoobscura:324

F7AIP5              	100.00%		Q292M1              	100.00%
Bootstrap support for F7AIP5 as seed ortholog is 100%.
Bootstrap support for Q292M1 as seed ortholog is 100%.

Group of orthologs #1553. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:324 D.pseudoobscura:116

F7AEB2              	100.00%		Q29A85              	100.00%
Bootstrap support for F7AEB2 as seed ortholog is 100%.
Bootstrap support for Q29A85 as seed ortholog is 98%.

Group of orthologs #1554. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 D.pseudoobscura:52

F6YG66              	100.00%		Q29GI1              	100.00%
Bootstrap support for F6YG66 as seed ortholog is 98%.
Bootstrap support for Q29GI1 as seed ortholog is 78%.

Group of orthologs #1555. Best score 324 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 D.pseudoobscura:324

F6Z9I2              	100.00%		Q29FV1              	100.00%
Bootstrap support for F6Z9I2 as seed ortholog is 99%.
Bootstrap support for Q29FV1 as seed ortholog is 100%.

Group of orthologs #1556. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 D.pseudoobscura:323

F6VKF0              	100.00%		Q292Z3              	100.00%
                    	       		Q29PI3              	20.17%
Bootstrap support for F6VKF0 as seed ortholog is 100%.
Bootstrap support for Q292Z3 as seed ortholog is 100%.

Group of orthologs #1557. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 D.pseudoobscura:323

F6SZQ5              	100.00%		Q28X58              	100.00%
Bootstrap support for F6SZQ5 as seed ortholog is 100%.
Bootstrap support for Q28X58 as seed ortholog is 100%.

Group of orthologs #1558. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 D.pseudoobscura:100

F6R4F4              	100.00%		Q292Q3              	100.00%
Bootstrap support for F6R4F4 as seed ortholog is 100%.
Bootstrap support for Q292Q3 as seed ortholog is 99%.

Group of orthologs #1559. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 D.pseudoobscura:323

F6X8P5              	100.00%		Q296V1              	100.00%
Bootstrap support for F6X8P5 as seed ortholog is 100%.
Bootstrap support for Q296V1 as seed ortholog is 100%.

Group of orthologs #1560. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 D.pseudoobscura:323

F6YSX7              	100.00%		Q29L21              	100.00%
Bootstrap support for F6YSX7 as seed ortholog is 100%.
Bootstrap support for Q29L21 as seed ortholog is 100%.

Group of orthologs #1561. Best score 323 bits
Score difference with first non-orthologous sequence - C.intestinalis:323 D.pseudoobscura:226

H2XVQ9              	100.00%		Q29EE2              	100.00%
Bootstrap support for H2XVQ9 as seed ortholog is 100%.
Bootstrap support for Q29EE2 as seed ortholog is 100%.

Group of orthologs #1562. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 D.pseudoobscura:256

F6TLU2              	100.00%		B5DQ69              	100.00%
F6TZG1              	17.88%		Q2LZ24              	22.55%
                    	       		B5DQ67              	19.13%
                    	       		Q293E6              	11.28%
Bootstrap support for F6TLU2 as seed ortholog is 79%.
Bootstrap support for B5DQ69 as seed ortholog is 100%.

Group of orthologs #1563. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 D.pseudoobscura:263

H2XQ91              	100.00%		Q299M0              	100.00%
                    	       		B5DV57              	42.99%
Bootstrap support for H2XQ91 as seed ortholog is 100%.
Bootstrap support for Q299M0 as seed ortholog is 100%.

Group of orthologs #1564. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 D.pseudoobscura:322

F6RPW8              	100.00%		Q297K6              	100.00%
Bootstrap support for F6RPW8 as seed ortholog is 100%.
Bootstrap support for Q297K6 as seed ortholog is 100%.

Group of orthologs #1565. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 D.pseudoobscura:185

F6Q6T5              	100.00%		Q2M0E9              	100.00%
Bootstrap support for F6Q6T5 as seed ortholog is 100%.
Bootstrap support for Q2M0E9 as seed ortholog is 100%.

Group of orthologs #1566. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 D.pseudoobscura:148

F6YA02              	100.00%		Q29KP2              	100.00%
Bootstrap support for F6YA02 as seed ortholog is 100%.
Bootstrap support for Q29KP2 as seed ortholog is 100%.

Group of orthologs #1567. Best score 322 bits
Score difference with first non-orthologous sequence - C.intestinalis:322 D.pseudoobscura:8

H2Y3D5              	100.00%		Q291L4              	100.00%
Bootstrap support for H2Y3D5 as seed ortholog is 100%.
Bootstrap support for Q291L4 as seed ortholog is 52%.
Alternative seed ortholog is Q292F2 (8 bits away from this cluster)

Group of orthologs #1568. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 D.pseudoobscura:26

H2Y3M9              	100.00%		Q298J5              	100.00%
F6UFU1              	16.32%		
F6QL57              	16.19%		
F6UGQ7              	9.79%		
Bootstrap support for H2Y3M9 as seed ortholog is 78%.
Bootstrap support for Q298J5 as seed ortholog is 68%.
Alternative seed ortholog is Q29IR9 (26 bits away from this cluster)

Group of orthologs #1569. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 D.pseudoobscura:321

H2Y307              	100.00%		Q29A42              	100.00%
                    	       		Q28YG0              	24.05%
Bootstrap support for H2Y307 as seed ortholog is 99%.
Bootstrap support for Q29A42 as seed ortholog is 100%.

Group of orthologs #1570. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 D.pseudoobscura:321

F6YJ84              	100.00%		Q293V0              	100.00%
Bootstrap support for F6YJ84 as seed ortholog is 100%.
Bootstrap support for Q293V0 as seed ortholog is 100%.

Group of orthologs #1571. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 D.pseudoobscura:151

Q4H358              	100.00%		B5DQY8              	100.00%
Bootstrap support for Q4H358 as seed ortholog is 99%.
Bootstrap support for B5DQY8 as seed ortholog is 100%.

Group of orthologs #1572. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 D.pseudoobscura:212

F6YR71              	100.00%		Q29ND2              	100.00%
Bootstrap support for F6YR71 as seed ortholog is 100%.
Bootstrap support for Q29ND2 as seed ortholog is 100%.

Group of orthologs #1573. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 D.pseudoobscura:168

H2XY76              	100.00%		Q291A4              	100.00%
Bootstrap support for H2XY76 as seed ortholog is 100%.
Bootstrap support for Q291A4 as seed ortholog is 100%.

Group of orthologs #1574. Best score 321 bits
Score difference with first non-orthologous sequence - C.intestinalis:321 D.pseudoobscura:321

H2XMX2              	100.00%		Q29I64              	100.00%
Bootstrap support for H2XMX2 as seed ortholog is 100%.
Bootstrap support for Q29I64 as seed ortholog is 100%.

Group of orthologs #1575. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 D.pseudoobscura:320

F7A0D6              	100.00%		Q290W0              	100.00%
                    	       		Q290V9              	24.81%
                    	       		Q290V8              	20.12%
Bootstrap support for F7A0D6 as seed ortholog is 100%.
Bootstrap support for Q290W0 as seed ortholog is 100%.

Group of orthologs #1576. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 D.pseudoobscura:184

F6QDT9              	100.00%		Q29K34              	100.00%
                    	       		Q29K37              	35.42%
Bootstrap support for F6QDT9 as seed ortholog is 99%.
Bootstrap support for Q29K34 as seed ortholog is 99%.

Group of orthologs #1577. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 D.pseudoobscura:223

H2XPL6              	100.00%		Q29I56              	100.00%
                    	       		Q29JR6              	7.07%
Bootstrap support for H2XPL6 as seed ortholog is 100%.
Bootstrap support for Q29I56 as seed ortholog is 100%.

Group of orthologs #1578. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:320 D.pseudoobscura:320

H2XVC3              	100.00%		B5DIQ1              	100.00%
Bootstrap support for H2XVC3 as seed ortholog is 100%.
Bootstrap support for B5DIQ1 as seed ortholog is 100%.

Group of orthologs #1579. Best score 320 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 D.pseudoobscura:320

F6ZGG6              	100.00%		Q29JW7              	100.00%
Bootstrap support for F6ZGG6 as seed ortholog is 100%.
Bootstrap support for Q29JW7 as seed ortholog is 100%.

Group of orthologs #1580. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 D.pseudoobscura:172

F6PM63              	100.00%		Q29FR0              	100.00%
                    	       		Q28YM9              	50.32%
Bootstrap support for F6PM63 as seed ortholog is 100%.
Bootstrap support for Q29FR0 as seed ortholog is 100%.

Group of orthologs #1581. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 D.pseudoobscura:319

F7BDS3              	100.00%		Q29B33              	100.00%
                    	       		Q297S7              	34.06%
Bootstrap support for F7BDS3 as seed ortholog is 100%.
Bootstrap support for Q29B33 as seed ortholog is 100%.

Group of orthologs #1582. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 D.pseudoobscura:319

H2XYL3              	100.00%		Q2LZL6              	100.00%
                    	       		Q29BY0              	26.64%
Bootstrap support for H2XYL3 as seed ortholog is 100%.
Bootstrap support for Q2LZL6 as seed ortholog is 100%.

Group of orthologs #1583. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 D.pseudoobscura:319

F6TMB1              	100.00%		B5DU68              	100.00%
Bootstrap support for F6TMB1 as seed ortholog is 100%.
Bootstrap support for B5DU68 as seed ortholog is 100%.

Group of orthologs #1584. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 D.pseudoobscura:319

F7AHV7              	100.00%		Q293E8              	100.00%
Bootstrap support for F7AHV7 as seed ortholog is 100%.
Bootstrap support for Q293E8 as seed ortholog is 100%.

Group of orthologs #1585. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 D.pseudoobscura:319

F7BH80              	100.00%		Q28ZJ3              	100.00%
Bootstrap support for F7BH80 as seed ortholog is 100%.
Bootstrap support for Q28ZJ3 as seed ortholog is 100%.

Group of orthologs #1586. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 D.pseudoobscura:319

F6TBW4              	100.00%		Q2M111              	100.00%
Bootstrap support for F6TBW4 as seed ortholog is 100%.
Bootstrap support for Q2M111 as seed ortholog is 100%.

Group of orthologs #1587. Best score 319 bits
Score difference with first non-orthologous sequence - C.intestinalis:319 D.pseudoobscura:319

H2XUV6              	100.00%		Q29BE0              	100.00%
Bootstrap support for H2XUV6 as seed ortholog is 100%.
Bootstrap support for Q29BE0 as seed ortholog is 100%.

Group of orthologs #1588. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 D.pseudoobscura:93

F6QM62              	100.00%		Q298Q0              	100.00%
                    	       		Q298Q1              	55.49%
Bootstrap support for F6QM62 as seed ortholog is 40%.
Alternative seed ortholog is F6WIM7 (11 bits away from this cluster)
Bootstrap support for Q298Q0 as seed ortholog is 98%.

Group of orthologs #1589. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 D.pseudoobscura:318

F6Q0T6              	100.00%		Q29KF6              	100.00%
Bootstrap support for F6Q0T6 as seed ortholog is 100%.
Bootstrap support for Q29KF6 as seed ortholog is 100%.

Group of orthologs #1590. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 D.pseudoobscura:318

F6UMM5              	100.00%		Q29BN5              	100.00%
Bootstrap support for F6UMM5 as seed ortholog is 100%.
Bootstrap support for Q29BN5 as seed ortholog is 100%.

Group of orthologs #1591. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 D.pseudoobscura:318

F6YM02              	100.00%		Q29BK7              	100.00%
Bootstrap support for F6YM02 as seed ortholog is 100%.
Bootstrap support for Q29BK7 as seed ortholog is 100%.

Group of orthologs #1592. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 D.pseudoobscura:318

F7BQ44              	100.00%		Q297F4              	100.00%
Bootstrap support for F7BQ44 as seed ortholog is 100%.
Bootstrap support for Q297F4 as seed ortholog is 100%.

Group of orthologs #1593. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 D.pseudoobscura:318

F6ZZH3              	100.00%		Q29K24              	100.00%
Bootstrap support for F6ZZH3 as seed ortholog is 100%.
Bootstrap support for Q29K24 as seed ortholog is 100%.

Group of orthologs #1594. Best score 318 bits
Score difference with first non-orthologous sequence - C.intestinalis:318 D.pseudoobscura:318

F7AYX3              	100.00%		Q29MY4              	100.00%
Bootstrap support for F7AYX3 as seed ortholog is 100%.
Bootstrap support for Q29MY4 as seed ortholog is 100%.

Group of orthologs #1595. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 D.pseudoobscura:142

Q4H3L5              	100.00%		Q29K65              	100.00%
F6ZMT5              	100.00%		Q298J6              	100.00%
                    	       		B5DIM1              	84.87%
                    	       		B5DVL2              	30.93%
Bootstrap support for Q4H3L5 as seed ortholog is 98%.
Bootstrap support for F6ZMT5 as seed ortholog is 95%.
Bootstrap support for Q29K65 as seed ortholog is 99%.
Bootstrap support for Q298J6 as seed ortholog is 99%.

Group of orthologs #1596. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 D.pseudoobscura:317

F6VL61              	100.00%		B5DPA2              	100.00%
F6VKS9              	19.12%		
Bootstrap support for F6VL61 as seed ortholog is 100%.
Bootstrap support for B5DPA2 as seed ortholog is 100%.

Group of orthologs #1597. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 D.pseudoobscura:317

F6RSZ1              	100.00%		B5DYN4              	100.00%
                    	       		B5DQ60              	98.79%
Bootstrap support for F6RSZ1 as seed ortholog is 100%.
Bootstrap support for B5DYN4 as seed ortholog is 100%.

Group of orthologs #1598. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 D.pseudoobscura:317

F7BA03              	100.00%		B5DNL7              	100.00%
                    	       		Q291C8              	13.23%
Bootstrap support for F7BA03 as seed ortholog is 100%.
Bootstrap support for B5DNL7 as seed ortholog is 100%.

Group of orthologs #1599. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 D.pseudoobscura:317

F6QQA0              	100.00%		B5DVX9              	100.00%
Bootstrap support for F6QQA0 as seed ortholog is 99%.
Bootstrap support for B5DVX9 as seed ortholog is 100%.

Group of orthologs #1600. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:317 D.pseudoobscura:317

F6YQB2              	100.00%		Q29G22              	100.00%
Bootstrap support for F6YQB2 as seed ortholog is 100%.
Bootstrap support for Q29G22 as seed ortholog is 100%.

Group of orthologs #1601. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 D.pseudoobscura:245

F6XWH9              	100.00%		Q29JF1              	100.00%
Bootstrap support for F6XWH9 as seed ortholog is 100%.
Bootstrap support for Q29JF1 as seed ortholog is 100%.

Group of orthologs #1602. Best score 317 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 D.pseudoobscura:317

F6ZS66              	100.00%		Q29F49              	100.00%
Bootstrap support for F6ZS66 as seed ortholog is 99%.
Bootstrap support for Q29F49 as seed ortholog is 100%.

Group of orthologs #1603. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 D.pseudoobscura:316

F6UA87              	100.00%		Q297N6              	100.00%
Bootstrap support for F6UA87 as seed ortholog is 100%.
Bootstrap support for Q297N6 as seed ortholog is 100%.

Group of orthologs #1604. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 D.pseudoobscura:178

F6Z491              	100.00%		Q291H6              	100.00%
Bootstrap support for F6Z491 as seed ortholog is 100%.
Bootstrap support for Q291H6 as seed ortholog is 100%.

Group of orthologs #1605. Best score 316 bits
Score difference with first non-orthologous sequence - C.intestinalis:316 D.pseudoobscura:316

H2XPV2              	100.00%		Q295F9              	100.00%
Bootstrap support for H2XPV2 as seed ortholog is 100%.
Bootstrap support for Q295F9 as seed ortholog is 100%.

Group of orthologs #1606. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 D.pseudoobscura:150

F6Q0N1              	100.00%		B5DX51              	100.00%
Bootstrap support for F6Q0N1 as seed ortholog is 100%.
Bootstrap support for B5DX51 as seed ortholog is 99%.

Group of orthologs #1607. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 D.pseudoobscura:315

F6YH98              	100.00%		Q290A3              	100.00%
Bootstrap support for F6YH98 as seed ortholog is 100%.
Bootstrap support for Q290A3 as seed ortholog is 100%.

Group of orthologs #1608. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 D.pseudoobscura:315

F7B369              	100.00%		Q29CJ9              	100.00%
Bootstrap support for F7B369 as seed ortholog is 100%.
Bootstrap support for Q29CJ9 as seed ortholog is 100%.

Group of orthologs #1609. Best score 315 bits
Score difference with first non-orthologous sequence - C.intestinalis:315 D.pseudoobscura:315

H2XLC7              	100.00%		Q29CL7              	100.00%
Bootstrap support for H2XLC7 as seed ortholog is 100%.
Bootstrap support for Q29CL7 as seed ortholog is 100%.

Group of orthologs #1610. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 D.pseudoobscura:314

F6TCH6              	100.00%		Q298K0              	100.00%
Bootstrap support for F6TCH6 as seed ortholog is 100%.
Bootstrap support for Q298K0 as seed ortholog is 100%.

Group of orthologs #1611. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 D.pseudoobscura:314

F6YKS6              	100.00%		I5ANY8              	100.00%
Bootstrap support for F6YKS6 as seed ortholog is 100%.
Bootstrap support for I5ANY8 as seed ortholog is 100%.

Group of orthologs #1612. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 D.pseudoobscura:238

F6TFD0              	100.00%		Q29HG9              	100.00%
Bootstrap support for F6TFD0 as seed ortholog is 100%.
Bootstrap support for Q29HG9 as seed ortholog is 100%.

Group of orthologs #1613. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 D.pseudoobscura:43

F6QQZ3              	100.00%		Q2LZA5              	100.00%
Bootstrap support for F6QQZ3 as seed ortholog is 93%.
Bootstrap support for Q2LZA5 as seed ortholog is 98%.

Group of orthologs #1614. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 D.pseudoobscura:314

H2XLM3              	100.00%		B5E0Q2              	100.00%
Bootstrap support for H2XLM3 as seed ortholog is 100%.
Bootstrap support for B5E0Q2 as seed ortholog is 100%.

Group of orthologs #1615. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 D.pseudoobscura:314

F6X3V2              	100.00%		Q29EF9              	100.00%
Bootstrap support for F6X3V2 as seed ortholog is 100%.
Bootstrap support for Q29EF9 as seed ortholog is 100%.

Group of orthologs #1616. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:314 D.pseudoobscura:314

H2XKC9              	100.00%		Q291W2              	100.00%
Bootstrap support for H2XKC9 as seed ortholog is 100%.
Bootstrap support for Q291W2 as seed ortholog is 100%.

Group of orthologs #1617. Best score 314 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 D.pseudoobscura:314

H2XQ34              	100.00%		Q2M0V4              	100.00%
Bootstrap support for H2XQ34 as seed ortholog is 100%.
Bootstrap support for Q2M0V4 as seed ortholog is 100%.

Group of orthologs #1618. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 D.pseudoobscura:107

F6SYX7              	100.00%		Q299F4              	100.00%
F6TPL8              	22.91%		
F6TKP0              	21.18%		
F7B882              	20.47%		
Bootstrap support for F6SYX7 as seed ortholog is 100%.
Bootstrap support for Q299F4 as seed ortholog is 97%.

Group of orthologs #1619. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 D.pseudoobscura:85

H2XTG6              	100.00%		Q29C45              	100.00%
F6YH77              	5.91%		Q29C48              	7.30%
                    	       		Q29C47              	6.04%
Bootstrap support for H2XTG6 as seed ortholog is 91%.
Bootstrap support for Q29C45 as seed ortholog is 96%.

Group of orthologs #1620. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 D.pseudoobscura:313

F6UMH6              	100.00%		Q29B32              	100.00%
                    	       		B5DW29              	18.64%
Bootstrap support for F6UMH6 as seed ortholog is 100%.
Bootstrap support for Q29B32 as seed ortholog is 100%.

Group of orthologs #1621. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 D.pseudoobscura:234

F6ZRE8              	100.00%		B5DSW6              	100.00%
Bootstrap support for F6ZRE8 as seed ortholog is 100%.
Bootstrap support for B5DSW6 as seed ortholog is 100%.

Group of orthologs #1622. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 D.pseudoobscura:313

F6W9T5              	100.00%		Q293P7              	100.00%
Bootstrap support for F6W9T5 as seed ortholog is 100%.
Bootstrap support for Q293P7 as seed ortholog is 100%.

Group of orthologs #1623. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 D.pseudoobscura:313

F6Z910              	100.00%		Q296V7              	100.00%
Bootstrap support for F6Z910 as seed ortholog is 100%.
Bootstrap support for Q296V7 as seed ortholog is 100%.

Group of orthologs #1624. Best score 313 bits
Score difference with first non-orthologous sequence - C.intestinalis:313 D.pseudoobscura:313

F6YGL5              	100.00%		Q2M1A9              	100.00%
Bootstrap support for F6YGL5 as seed ortholog is 100%.
Bootstrap support for Q2M1A9 as seed ortholog is 100%.

Group of orthologs #1625. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 D.pseudoobscura:312

F6PN41              	100.00%		B5E1A1              	100.00%
Bootstrap support for F6PN41 as seed ortholog is 100%.
Bootstrap support for B5E1A1 as seed ortholog is 100%.

Group of orthologs #1626. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 D.pseudoobscura:258

H2XNQ0              	100.00%		B5DHW4              	100.00%
Bootstrap support for H2XNQ0 as seed ortholog is 95%.
Bootstrap support for B5DHW4 as seed ortholog is 100%.

Group of orthologs #1627. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:312 D.pseudoobscura:87

F6XPZ4              	100.00%		Q292B8              	100.00%
Bootstrap support for F6XPZ4 as seed ortholog is 100%.
Bootstrap support for Q292B8 as seed ortholog is 99%.

Group of orthologs #1628. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 D.pseudoobscura:82

F7BEI8              	100.00%		Q29AC9              	100.00%
Bootstrap support for F7BEI8 as seed ortholog is 100%.
Bootstrap support for Q29AC9 as seed ortholog is 99%.

Group of orthologs #1629. Best score 312 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 D.pseudoobscura:10

H2Y040              	100.00%		Q2M0P5              	100.00%
Bootstrap support for H2Y040 as seed ortholog is 70%.
Alternative seed ortholog is H2Y3F2 (10 bits away from this cluster)
Bootstrap support for Q2M0P5 as seed ortholog is 72%.
Alternative seed ortholog is Q29CQ9 (10 bits away from this cluster)

Group of orthologs #1630. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 D.pseudoobscura:311

F6PQ74              	100.00%		Q28Z48              	100.00%
Bootstrap support for F6PQ74 as seed ortholog is 100%.
Bootstrap support for Q28Z48 as seed ortholog is 100%.

Group of orthologs #1631. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 D.pseudoobscura:311

F6Y6W3              	100.00%		Q28ZE6              	100.00%
Bootstrap support for F6Y6W3 as seed ortholog is 100%.
Bootstrap support for Q28ZE6 as seed ortholog is 100%.

Group of orthologs #1632. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 D.pseudoobscura:311

F7ASH4              	100.00%		B5E1D9              	100.00%
Bootstrap support for F7ASH4 as seed ortholog is 100%.
Bootstrap support for B5E1D9 as seed ortholog is 100%.

Group of orthologs #1633. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 D.pseudoobscura:311

F6Z6K5              	100.00%		Q299V1              	100.00%
Bootstrap support for F6Z6K5 as seed ortholog is 100%.
Bootstrap support for Q299V1 as seed ortholog is 100%.

Group of orthologs #1634. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 D.pseudoobscura:311

F6YCY6              	100.00%		Q29DZ8              	100.00%
Bootstrap support for F6YCY6 as seed ortholog is 100%.
Bootstrap support for Q29DZ8 as seed ortholog is 100%.

Group of orthologs #1635. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 D.pseudoobscura:311

F7AZT4              	100.00%		Q295A6              	100.00%
Bootstrap support for F7AZT4 as seed ortholog is 100%.
Bootstrap support for Q295A6 as seed ortholog is 100%.

Group of orthologs #1636. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 D.pseudoobscura:311

F6WRB6              	100.00%		Q2LZ28              	100.00%
Bootstrap support for F6WRB6 as seed ortholog is 100%.
Bootstrap support for Q2LZ28 as seed ortholog is 100%.

Group of orthologs #1637. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 D.pseudoobscura:311

H2XK69              	100.00%		Q29BT5              	100.00%
Bootstrap support for H2XK69 as seed ortholog is 100%.
Bootstrap support for Q29BT5 as seed ortholog is 100%.

Group of orthologs #1638. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 D.pseudoobscura:311

F6Z7A9              	100.00%		Q29MC8              	100.00%
Bootstrap support for F6Z7A9 as seed ortholog is 100%.
Bootstrap support for Q29MC8 as seed ortholog is 100%.

Group of orthologs #1639. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 D.pseudoobscura:143

H2XZE5              	100.00%		Q290M7              	100.00%
Bootstrap support for H2XZE5 as seed ortholog is 100%.
Bootstrap support for Q290M7 as seed ortholog is 99%.

Group of orthologs #1640. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:311 D.pseudoobscura:311

F7B310              	100.00%		Q29LJ3              	100.00%
Bootstrap support for F7B310 as seed ortholog is 100%.
Bootstrap support for Q29LJ3 as seed ortholog is 100%.

Group of orthologs #1641. Best score 311 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 D.pseudoobscura:311

H2Y2L0              	100.00%		Q29BL7              	100.00%
Bootstrap support for H2Y2L0 as seed ortholog is 100%.
Bootstrap support for Q29BL7 as seed ortholog is 100%.

Group of orthologs #1642. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 D.pseudoobscura:310

F6WSZ0              	100.00%		Q296F2              	100.00%
Bootstrap support for F6WSZ0 as seed ortholog is 100%.
Bootstrap support for Q296F2 as seed ortholog is 100%.

Group of orthologs #1643. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 D.pseudoobscura:128

F7BEA7              	100.00%		Q28YH9              	100.00%
Bootstrap support for F7BEA7 as seed ortholog is 100%.
Bootstrap support for Q28YH9 as seed ortholog is 99%.

Group of orthologs #1644. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 D.pseudoobscura:310

F6T4V8              	100.00%		Q2M1D1              	100.00%
Bootstrap support for F6T4V8 as seed ortholog is 100%.
Bootstrap support for Q2M1D1 as seed ortholog is 100%.

Group of orthologs #1645. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 D.pseudoobscura:310

H2Y0A5              	100.00%		B5DSA7              	100.00%
Bootstrap support for H2Y0A5 as seed ortholog is 100%.
Bootstrap support for B5DSA7 as seed ortholog is 100%.

Group of orthologs #1646. Best score 310 bits
Score difference with first non-orthologous sequence - C.intestinalis:310 D.pseudoobscura:310

I6L7H7              	100.00%		B5DPF1              	100.00%
Bootstrap support for I6L7H7 as seed ortholog is 100%.
Bootstrap support for B5DPF1 as seed ortholog is 100%.

Group of orthologs #1647. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 D.pseudoobscura:129

F6RC25              	100.00%		Q28XK4              	100.00%
                    	       		Q291Z9              	11.41%
Bootstrap support for F6RC25 as seed ortholog is 100%.
Bootstrap support for Q28XK4 as seed ortholog is 99%.

Group of orthologs #1648. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 D.pseudoobscura:174

F6S8Z0              	100.00%		Q292W9              	100.00%
Bootstrap support for F6S8Z0 as seed ortholog is 100%.
Bootstrap support for Q292W9 as seed ortholog is 100%.

Group of orthologs #1649. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 D.pseudoobscura:309

F6XZ31              	100.00%		Q28YA3              	100.00%
Bootstrap support for F6XZ31 as seed ortholog is 100%.
Bootstrap support for Q28YA3 as seed ortholog is 100%.

Group of orthologs #1650. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 D.pseudoobscura:168

F6S1S7              	100.00%		Q29MK6              	100.00%
Bootstrap support for F6S1S7 as seed ortholog is 100%.
Bootstrap support for Q29MK6 as seed ortholog is 100%.

Group of orthologs #1651. Best score 309 bits
Score difference with first non-orthologous sequence - C.intestinalis:309 D.pseudoobscura:309

F6XE85              	100.00%		Q29NG1              	100.00%
Bootstrap support for F6XE85 as seed ortholog is 100%.
Bootstrap support for Q29NG1 as seed ortholog is 100%.

Group of orthologs #1652. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 D.pseudoobscura:82

F7B9X1              	100.00%		Q297M5              	100.00%
                    	       		Q297M6              	52.11%
                    	       		B5DWF7              	28.95%
Bootstrap support for F7B9X1 as seed ortholog is 99%.
Bootstrap support for Q297M5 as seed ortholog is 99%.

Group of orthologs #1653. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 D.pseudoobscura:230

F6WR94              	100.00%		B5DHC6              	100.00%
Bootstrap support for F6WR94 as seed ortholog is 100%.
Bootstrap support for B5DHC6 as seed ortholog is 100%.

Group of orthologs #1654. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 D.pseudoobscura:262

F6YSP8              	100.00%		Q29IJ7              	100.00%
Bootstrap support for F6YSP8 as seed ortholog is 100%.
Bootstrap support for Q29IJ7 as seed ortholog is 100%.

Group of orthologs #1655. Best score 308 bits
Score difference with first non-orthologous sequence - C.intestinalis:308 D.pseudoobscura:308

F7A4J9              	100.00%		Q29PH9              	100.00%
Bootstrap support for F7A4J9 as seed ortholog is 100%.
Bootstrap support for Q29PH9 as seed ortholog is 100%.

Group of orthologs #1656. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 D.pseudoobscura:307

F6XQS7              	100.00%		Q298D4              	100.00%
                    	       		Q29LC9              	7.21%
                    	       		Q29D09              	5.29%
Bootstrap support for F6XQS7 as seed ortholog is 100%.
Bootstrap support for Q298D4 as seed ortholog is 100%.

Group of orthologs #1657. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 D.pseudoobscura:307

F6RID7              	100.00%		Q29C17              	100.00%
Bootstrap support for F6RID7 as seed ortholog is 100%.
Bootstrap support for Q29C17 as seed ortholog is 100%.

Group of orthologs #1658. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 D.pseudoobscura:307

F6TLL4              	100.00%		Q297F0              	100.00%
Bootstrap support for F6TLL4 as seed ortholog is 100%.
Bootstrap support for Q297F0 as seed ortholog is 100%.

Group of orthologs #1659. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 D.pseudoobscura:307

F6URK3              	100.00%		Q298X3              	100.00%
Bootstrap support for F6URK3 as seed ortholog is 100%.
Bootstrap support for Q298X3 as seed ortholog is 100%.

Group of orthologs #1660. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 D.pseudoobscura:307

F6TAV4              	100.00%		Q29HV8              	100.00%
Bootstrap support for F6TAV4 as seed ortholog is 100%.
Bootstrap support for Q29HV8 as seed ortholog is 100%.

Group of orthologs #1661. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 D.pseudoobscura:307

F6U397              	100.00%		Q29GM5              	100.00%
Bootstrap support for F6U397 as seed ortholog is 100%.
Bootstrap support for Q29GM5 as seed ortholog is 100%.

Group of orthologs #1662. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 D.pseudoobscura:307

F6PYR8              	100.00%		Q2LZJ2              	100.00%
Bootstrap support for F6PYR8 as seed ortholog is 100%.
Bootstrap support for Q2LZJ2 as seed ortholog is 100%.

Group of orthologs #1663. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 D.pseudoobscura:307

F6RCH7              	100.00%		Q29P26              	100.00%
Bootstrap support for F6RCH7 as seed ortholog is 100%.
Bootstrap support for Q29P26 as seed ortholog is 100%.

Group of orthologs #1664. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:307 D.pseudoobscura:307

F6X8B5              	100.00%		Q29D05              	100.00%
Bootstrap support for F6X8B5 as seed ortholog is 100%.
Bootstrap support for Q29D05 as seed ortholog is 100%.

Group of orthologs #1665. Best score 307 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 D.pseudoobscura:78

F6YFX5              	100.00%		Q2LZ20              	100.00%
Bootstrap support for F6YFX5 as seed ortholog is 38%.
Alternative seed ortholog is F6YG13 (15 bits away from this cluster)
Bootstrap support for Q2LZ20 as seed ortholog is 99%.

Group of orthologs #1666. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 D.pseudoobscura:151

F6XJF3              	100.00%		Q29GT2              	100.00%
Bootstrap support for F6XJF3 as seed ortholog is 99%.
Bootstrap support for Q29GT2 as seed ortholog is 99%.

Group of orthologs #1667. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:306 D.pseudoobscura:306

F7A1H6              	100.00%		Q29EY2              	100.00%
Bootstrap support for F7A1H6 as seed ortholog is 100%.
Bootstrap support for Q29EY2 as seed ortholog is 100%.

Group of orthologs #1668. Best score 306 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 D.pseudoobscura:69

H2Y1B6              	100.00%		Q28YV1              	100.00%
Bootstrap support for H2Y1B6 as seed ortholog is 99%.
Bootstrap support for Q28YV1 as seed ortholog is 99%.

Group of orthologs #1669. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 D.pseudoobscura:305

F7A160              	100.00%		Q29PC1              	100.00%
                    	       		Q29N05              	12.63%
Bootstrap support for F7A160 as seed ortholog is 100%.
Bootstrap support for Q29PC1 as seed ortholog is 100%.

Group of orthologs #1670. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 D.pseudoobscura:305

F6X0V6              	100.00%		B5DHB7              	100.00%
Bootstrap support for F6X0V6 as seed ortholog is 100%.
Bootstrap support for B5DHB7 as seed ortholog is 100%.

Group of orthologs #1671. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 D.pseudoobscura:305

F6SFM0              	100.00%		B5DY45              	100.00%
Bootstrap support for F6SFM0 as seed ortholog is 100%.
Bootstrap support for B5DY45 as seed ortholog is 100%.

Group of orthologs #1672. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 D.pseudoobscura:305

F6YY79              	100.00%		B5DKI7              	100.00%
Bootstrap support for F6YY79 as seed ortholog is 100%.
Bootstrap support for B5DKI7 as seed ortholog is 100%.

Group of orthologs #1673. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 D.pseudoobscura:305

F6S578              	100.00%		Q29AN0              	100.00%
Bootstrap support for F6S578 as seed ortholog is 100%.
Bootstrap support for Q29AN0 as seed ortholog is 100%.

Group of orthologs #1674. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 D.pseudoobscura:158

F6ZFM9              	100.00%		Q295G1              	100.00%
Bootstrap support for F6ZFM9 as seed ortholog is 99%.
Bootstrap support for Q295G1 as seed ortholog is 100%.

Group of orthologs #1675. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 D.pseudoobscura:305

H2XP51              	100.00%		Q28YI7              	100.00%
Bootstrap support for H2XP51 as seed ortholog is 100%.
Bootstrap support for Q28YI7 as seed ortholog is 100%.

Group of orthologs #1676. Best score 305 bits
Score difference with first non-orthologous sequence - C.intestinalis:305 D.pseudoobscura:174

F7AFK8              	100.00%		Q29D94              	100.00%
Bootstrap support for F7AFK8 as seed ortholog is 100%.
Bootstrap support for Q29D94 as seed ortholog is 100%.

Group of orthologs #1677. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 D.pseudoobscura:304

F7AA01              	100.00%		B5DYA3              	100.00%
H2XJY8              	22.95%		Q29BP0              	31.12%
Bootstrap support for F7AA01 as seed ortholog is 100%.
Bootstrap support for B5DYA3 as seed ortholog is 100%.

Group of orthologs #1678. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 D.pseudoobscura:304

F6SNL0              	100.00%		B5DUR4              	100.00%
Bootstrap support for F6SNL0 as seed ortholog is 100%.
Bootstrap support for B5DUR4 as seed ortholog is 100%.

Group of orthologs #1679. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 D.pseudoobscura:26

F6Z255              	100.00%		B5DN66              	100.00%
Bootstrap support for F6Z255 as seed ortholog is 99%.
Bootstrap support for B5DN66 as seed ortholog is 88%.

Group of orthologs #1680. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 D.pseudoobscura:304

F7AA24              	100.00%		B5DSB7              	100.00%
Bootstrap support for F7AA24 as seed ortholog is 100%.
Bootstrap support for B5DSB7 as seed ortholog is 100%.

Group of orthologs #1681. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 D.pseudoobscura:304

F7AA18              	100.00%		B5DVI6              	100.00%
Bootstrap support for F7AA18 as seed ortholog is 100%.
Bootstrap support for B5DVI6 as seed ortholog is 100%.

Group of orthologs #1682. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 D.pseudoobscura:304

F6PJM3              	100.00%		Q2LZF8              	100.00%
Bootstrap support for F6PJM3 as seed ortholog is 99%.
Bootstrap support for Q2LZF8 as seed ortholog is 100%.

Group of orthologs #1683. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 D.pseudoobscura:304

F6UJM5              	100.00%		Q29NK6              	100.00%
Bootstrap support for F6UJM5 as seed ortholog is 100%.
Bootstrap support for Q29NK6 as seed ortholog is 100%.

Group of orthologs #1684. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 D.pseudoobscura:304

F6YVL2              	100.00%		Q8I1C0              	100.00%
Bootstrap support for F6YVL2 as seed ortholog is 100%.
Bootstrap support for Q8I1C0 as seed ortholog is 100%.

Group of orthologs #1685. Best score 304 bits
Score difference with first non-orthologous sequence - C.intestinalis:304 D.pseudoobscura:304

H2Y1E6              	100.00%		Q29GE9              	100.00%
Bootstrap support for H2Y1E6 as seed ortholog is 100%.
Bootstrap support for Q29GE9 as seed ortholog is 100%.

Group of orthologs #1686. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 D.pseudoobscura:113

H2XT39              	100.00%		B5DKJ9              	100.00%
F7A9K4              	5.15%		
Bootstrap support for H2XT39 as seed ortholog is 100%.
Bootstrap support for B5DKJ9 as seed ortholog is 99%.

Group of orthologs #1687. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 D.pseudoobscura:303

F6T2S3              	100.00%		B5E0A0              	100.00%
Bootstrap support for F6T2S3 as seed ortholog is 100%.
Bootstrap support for B5E0A0 as seed ortholog is 100%.

Group of orthologs #1688. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 D.pseudoobscura:303

F6QY42              	100.00%		Q293X3              	100.00%
Bootstrap support for F6QY42 as seed ortholog is 100%.
Bootstrap support for Q293X3 as seed ortholog is 100%.

Group of orthologs #1689. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 D.pseudoobscura:96

B1H3L8              	100.00%		Q299S3              	100.00%
Bootstrap support for B1H3L8 as seed ortholog is 99%.
Bootstrap support for Q299S3 as seed ortholog is 95%.

Group of orthologs #1690. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 D.pseudoobscura:115

F6QL17              	100.00%		Q29I63              	100.00%
Bootstrap support for F6QL17 as seed ortholog is 100%.
Bootstrap support for Q29I63 as seed ortholog is 99%.

Group of orthologs #1691. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 D.pseudoobscura:303

F6U1Z4              	100.00%		Q29D51              	100.00%
Bootstrap support for F6U1Z4 as seed ortholog is 100%.
Bootstrap support for Q29D51 as seed ortholog is 100%.

Group of orthologs #1692. Best score 303 bits
Score difference with first non-orthologous sequence - C.intestinalis:303 D.pseudoobscura:303

F7AAL8              	100.00%		Q295A5              	100.00%
Bootstrap support for F7AAL8 as seed ortholog is 100%.
Bootstrap support for Q295A5 as seed ortholog is 100%.

Group of orthologs #1693. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:302

F6X9C7              	100.00%		Q297P9              	100.00%
H2XY34              	10.92%		
H2XPK9              	5.28%		
Bootstrap support for F6X9C7 as seed ortholog is 88%.
Bootstrap support for Q297P9 as seed ortholog is 100%.

Group of orthologs #1694. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 D.pseudoobscura:302

F6QG73              	100.00%		Q28XT4              	100.00%
Bootstrap support for F6QG73 as seed ortholog is 100%.
Bootstrap support for Q28XT4 as seed ortholog is 100%.

Group of orthologs #1695. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 D.pseudoobscura:109

F6RUQ3              	100.00%		Q28ZN7              	100.00%
Bootstrap support for F6RUQ3 as seed ortholog is 100%.
Bootstrap support for Q28ZN7 as seed ortholog is 99%.

Group of orthologs #1696. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 D.pseudoobscura:204

F6SMU1              	100.00%		Q290I8              	100.00%
Bootstrap support for F6SMU1 as seed ortholog is 99%.
Bootstrap support for Q290I8 as seed ortholog is 100%.

Group of orthologs #1697. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 D.pseudoobscura:200

F6PH64              	100.00%		Q29DT5              	100.00%
Bootstrap support for F6PH64 as seed ortholog is 99%.
Bootstrap support for Q29DT5 as seed ortholog is 99%.

Group of orthologs #1698. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 D.pseudoobscura:302

F6PJU1              	100.00%		Q29JX3              	100.00%
Bootstrap support for F6PJU1 as seed ortholog is 100%.
Bootstrap support for Q29JX3 as seed ortholog is 100%.

Group of orthologs #1699. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 D.pseudoobscura:302

H2XMH4              	100.00%		Q28WX9              	100.00%
Bootstrap support for H2XMH4 as seed ortholog is 100%.
Bootstrap support for Q28WX9 as seed ortholog is 100%.

Group of orthologs #1700. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 D.pseudoobscura:240

F6ZVR2              	100.00%		Q29BC6              	100.00%
Bootstrap support for F6ZVR2 as seed ortholog is 100%.
Bootstrap support for Q29BC6 as seed ortholog is 100%.

Group of orthologs #1701. Best score 302 bits
Score difference with first non-orthologous sequence - C.intestinalis:302 D.pseudoobscura:302

F7AI88              	100.00%		Q29B78              	100.00%
Bootstrap support for F7AI88 as seed ortholog is 100%.
Bootstrap support for Q29B78 as seed ortholog is 100%.

Group of orthologs #1702. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 D.pseudoobscura:36

A7BK23              	100.00%		B5E1G5              	100.00%
                    	       		Q28X25              	12.20%
Bootstrap support for A7BK23 as seed ortholog is 100%.
Bootstrap support for B5E1G5 as seed ortholog is 67%.
Alternative seed ortholog is Q299Y8 (36 bits away from this cluster)

Group of orthologs #1703. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 D.pseudoobscura:301

F6XML2              	100.00%		Q293H2              	100.00%
Bootstrap support for F6XML2 as seed ortholog is 100%.
Bootstrap support for Q293H2 as seed ortholog is 100%.

Group of orthologs #1704. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 D.pseudoobscura:301

F6RD37              	100.00%		Q29PE2              	100.00%
Bootstrap support for F6RD37 as seed ortholog is 100%.
Bootstrap support for Q29PE2 as seed ortholog is 100%.

Group of orthologs #1705. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 D.pseudoobscura:301

F6ZCS4              	100.00%		Q294H3              	100.00%
Bootstrap support for F6ZCS4 as seed ortholog is 100%.
Bootstrap support for Q294H3 as seed ortholog is 100%.

Group of orthologs #1706. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 D.pseudoobscura:301

F7BHN6              	100.00%		Q29K60              	100.00%
Bootstrap support for F7BHN6 as seed ortholog is 100%.
Bootstrap support for Q29K60 as seed ortholog is 100%.

Group of orthologs #1707. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:301 D.pseudoobscura:301

H2XWZ5              	100.00%		Q29K51              	100.00%
Bootstrap support for H2XWZ5 as seed ortholog is 100%.
Bootstrap support for Q29K51 as seed ortholog is 100%.

Group of orthologs #1708. Best score 301 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 D.pseudoobscura:106

H2Y3H5              	100.00%		Q2M061              	100.00%
Bootstrap support for H2Y3H5 as seed ortholog is 100%.
Bootstrap support for Q2M061 as seed ortholog is 100%.

Group of orthologs #1709. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 D.pseudoobscura:217

F6QEH2              	100.00%		Q29IV2              	100.00%
                    	       		Q294N2              	27.59%
Bootstrap support for F6QEH2 as seed ortholog is 100%.
Bootstrap support for Q29IV2 as seed ortholog is 100%.

Group of orthologs #1710. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 D.pseudoobscura:300

F6RKK1              	100.00%		Q297T2              	100.00%
Bootstrap support for F6RKK1 as seed ortholog is 87%.
Bootstrap support for Q297T2 as seed ortholog is 100%.

Group of orthologs #1711. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 D.pseudoobscura:300

F6Q5L2              	100.00%		Q29ID7              	100.00%
Bootstrap support for F6Q5L2 as seed ortholog is 100%.
Bootstrap support for Q29ID7 as seed ortholog is 100%.

Group of orthologs #1712. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 D.pseudoobscura:300

F6T7H6              	100.00%		Q2LZB0              	100.00%
Bootstrap support for F6T7H6 as seed ortholog is 100%.
Bootstrap support for Q2LZB0 as seed ortholog is 100%.

Group of orthologs #1713. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 D.pseudoobscura:300

F7AWS8              	100.00%		Q298H3              	100.00%
Bootstrap support for F7AWS8 as seed ortholog is 100%.
Bootstrap support for Q298H3 as seed ortholog is 100%.

Group of orthologs #1714. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 D.pseudoobscura:300

F6V304              	100.00%		Q2M1C9              	100.00%
Bootstrap support for F6V304 as seed ortholog is 100%.
Bootstrap support for Q2M1C9 as seed ortholog is 100%.

Group of orthologs #1715. Best score 300 bits
Score difference with first non-orthologous sequence - C.intestinalis:300 D.pseudoobscura:300

H2XRW4              	100.00%		Q296Q6              	100.00%
Bootstrap support for H2XRW4 as seed ortholog is 100%.
Bootstrap support for Q296Q6 as seed ortholog is 100%.

Group of orthologs #1716. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 D.pseudoobscura:71

F6Q6E0              	100.00%		Q29JY6              	100.00%
F6WXB6              	15.68%		
F6Y813              	5.00%		
Bootstrap support for F6Q6E0 as seed ortholog is 100%.
Bootstrap support for Q29JY6 as seed ortholog is 90%.

Group of orthologs #1717. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 D.pseudoobscura:299

F6QCQ5              	100.00%		Q290T9              	100.00%
Bootstrap support for F6QCQ5 as seed ortholog is 100%.
Bootstrap support for Q290T9 as seed ortholog is 100%.

Group of orthologs #1718. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 D.pseudoobscura:299

F6Q4K7              	100.00%		Q29C61              	100.00%
Bootstrap support for F6Q4K7 as seed ortholog is 100%.
Bootstrap support for Q29C61 as seed ortholog is 100%.

Group of orthologs #1719. Best score 299 bits
Score difference with first non-orthologous sequence - C.intestinalis:299 D.pseudoobscura:162

F6XGG4              	100.00%		Q290A8              	100.00%
Bootstrap support for F6XGG4 as seed ortholog is 100%.
Bootstrap support for Q290A8 as seed ortholog is 100%.

Group of orthologs #1720. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 D.pseudoobscura:298

F6TE09              	100.00%		Q297M3              	100.00%
Bootstrap support for F6TE09 as seed ortholog is 100%.
Bootstrap support for Q297M3 as seed ortholog is 100%.

Group of orthologs #1721. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 D.pseudoobscura:298

F6TS86              	100.00%		Q29BF8              	100.00%
Bootstrap support for F6TS86 as seed ortholog is 98%.
Bootstrap support for Q29BF8 as seed ortholog is 100%.

Group of orthologs #1722. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 D.pseudoobscura:298

F6XVH7              	100.00%		Q29GW0              	100.00%
Bootstrap support for F6XVH7 as seed ortholog is 100%.
Bootstrap support for Q29GW0 as seed ortholog is 100%.

Group of orthologs #1723. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 D.pseudoobscura:298

F6ZGS5              	100.00%		Q29DY6              	100.00%
Bootstrap support for F6ZGS5 as seed ortholog is 100%.
Bootstrap support for Q29DY6 as seed ortholog is 100%.

Group of orthologs #1724. Best score 298 bits
Score difference with first non-orthologous sequence - C.intestinalis:298 D.pseudoobscura:298

H2Y2N2              	100.00%		Q29C42              	100.00%
Bootstrap support for H2Y2N2 as seed ortholog is 100%.
Bootstrap support for Q29C42 as seed ortholog is 100%.

Group of orthologs #1725. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 D.pseudoobscura:75

F6TY79              	100.00%		Q294V9              	100.00%
H2XXG9              	15.49%		
H2Y212              	7.34%		
H2XWY5              	7.07%		
Bootstrap support for F6TY79 as seed ortholog is 88%.
Bootstrap support for Q294V9 as seed ortholog is 94%.

Group of orthologs #1726. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 D.pseudoobscura:297

H2XK45              	100.00%		B5DV37              	100.00%
                    	       		B5DW24              	100.00%
Bootstrap support for H2XK45 as seed ortholog is 99%.
Bootstrap support for B5DV37 as seed ortholog is 100%.
Bootstrap support for B5DW24 as seed ortholog is 100%.

Group of orthologs #1727. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 D.pseudoobscura:297

F6PLX9              	100.00%		Q292F1              	100.00%
Bootstrap support for F6PLX9 as seed ortholog is 100%.
Bootstrap support for Q292F1 as seed ortholog is 100%.

Group of orthologs #1728. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 D.pseudoobscura:297

F6T0X5              	100.00%		Q295Y8              	100.00%
Bootstrap support for F6T0X5 as seed ortholog is 100%.
Bootstrap support for Q295Y8 as seed ortholog is 100%.

Group of orthologs #1729. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 D.pseudoobscura:297

F6W170              	100.00%		Q293A7              	100.00%
Bootstrap support for F6W170 as seed ortholog is 100%.
Bootstrap support for Q293A7 as seed ortholog is 100%.

Group of orthologs #1730. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 D.pseudoobscura:297

F6WM99              	100.00%		Q294T7              	100.00%
Bootstrap support for F6WM99 as seed ortholog is 100%.
Bootstrap support for Q294T7 as seed ortholog is 100%.

Group of orthologs #1731. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 D.pseudoobscura:92

F6TSM0              	100.00%		Q29F04              	100.00%
Bootstrap support for F6TSM0 as seed ortholog is 100%.
Bootstrap support for Q29F04 as seed ortholog is 97%.

Group of orthologs #1732. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 D.pseudoobscura:157

F6WMB2              	100.00%		Q29KK4              	100.00%
Bootstrap support for F6WMB2 as seed ortholog is 99%.
Bootstrap support for Q29KK4 as seed ortholog is 99%.

Group of orthologs #1733. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 D.pseudoobscura:297

F6VW40              	100.00%		Q29MJ3              	100.00%
Bootstrap support for F6VW40 as seed ortholog is 100%.
Bootstrap support for Q29MJ3 as seed ortholog is 100%.

Group of orthologs #1734. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 D.pseudoobscura:297

F6WYE6              	100.00%		Q29LP9              	100.00%
Bootstrap support for F6WYE6 as seed ortholog is 100%.
Bootstrap support for Q29LP9 as seed ortholog is 100%.

Group of orthologs #1735. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 D.pseudoobscura:297

H2XUQ0              	100.00%		I7LZD3              	100.00%
Bootstrap support for H2XUQ0 as seed ortholog is 100%.
Bootstrap support for I7LZD3 as seed ortholog is 100%.

Group of orthologs #1736. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 D.pseudoobscura:196

H2XPM6              	100.00%		Q29B68              	100.00%
Bootstrap support for H2XPM6 as seed ortholog is 100%.
Bootstrap support for Q29B68 as seed ortholog is 99%.

Group of orthologs #1737. Best score 297 bits
Score difference with first non-orthologous sequence - C.intestinalis:297 D.pseudoobscura:297

H2XY27              	100.00%		Q29GG8              	100.00%
Bootstrap support for H2XY27 as seed ortholog is 100%.
Bootstrap support for Q29GG8 as seed ortholog is 100%.

Group of orthologs #1738. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 D.pseudoobscura:296

F6W9C9              	100.00%		Q28X29              	100.00%
Bootstrap support for F6W9C9 as seed ortholog is 100%.
Bootstrap support for Q28X29 as seed ortholog is 100%.

Group of orthologs #1739. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 D.pseudoobscura:296

F6PM34              	100.00%		Q29N06              	100.00%
Bootstrap support for F6PM34 as seed ortholog is 100%.
Bootstrap support for Q29N06 as seed ortholog is 100%.

Group of orthologs #1740. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 D.pseudoobscura:296

F6WUH0              	100.00%		Q29E23              	100.00%
Bootstrap support for F6WUH0 as seed ortholog is 100%.
Bootstrap support for Q29E23 as seed ortholog is 100%.

Group of orthologs #1741. Best score 296 bits
Score difference with first non-orthologous sequence - C.intestinalis:296 D.pseudoobscura:296

F6XYV2              	100.00%		Q29FD7              	100.00%
Bootstrap support for F6XYV2 as seed ortholog is 100%.
Bootstrap support for Q29FD7 as seed ortholog is 100%.

Group of orthologs #1742. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 D.pseudoobscura:181

F6ZM65              	100.00%		Q2M023              	100.00%
                    	       		B5DYI4              	56.77%
Bootstrap support for F6ZM65 as seed ortholog is 100%.
Bootstrap support for Q2M023 as seed ortholog is 100%.

Group of orthologs #1743. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 D.pseudoobscura:212

H2XZG7              	100.00%		Q29GB9              	100.00%
                    	       		B5DZB3              	27.08%
Bootstrap support for H2XZG7 as seed ortholog is 100%.
Bootstrap support for Q29GB9 as seed ortholog is 100%.

Group of orthologs #1744. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 D.pseudoobscura:295

K9J6P5              	100.00%		Q29DB7              	100.00%
F7AYD9              	64.98%		
Bootstrap support for K9J6P5 as seed ortholog is 100%.
Bootstrap support for Q29DB7 as seed ortholog is 100%.

Group of orthologs #1745. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 D.pseudoobscura:36

F6TVX8              	100.00%		B5DPM0              	100.00%
Bootstrap support for F6TVX8 as seed ortholog is 99%.
Bootstrap support for B5DPM0 as seed ortholog is 85%.

Group of orthologs #1746. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 D.pseudoobscura:13

D2KU21              	100.00%		Q293L6              	100.00%
Bootstrap support for D2KU21 as seed ortholog is 95%.
Bootstrap support for Q293L6 as seed ortholog is 70%.
Alternative seed ortholog is Q293L8 (13 bits away from this cluster)

Group of orthologs #1747. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 D.pseudoobscura:295

F7BHG2              	100.00%		B5DNM6              	100.00%
Bootstrap support for F7BHG2 as seed ortholog is 100%.
Bootstrap support for B5DNM6 as seed ortholog is 100%.

Group of orthologs #1748. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 D.pseudoobscura:295

H2XN98              	100.00%		B5DW16              	100.00%
Bootstrap support for H2XN98 as seed ortholog is 100%.
Bootstrap support for B5DW16 as seed ortholog is 100%.

Group of orthologs #1749. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 D.pseudoobscura:295

H2XME3              	100.00%		Q290C3              	100.00%
Bootstrap support for H2XME3 as seed ortholog is 100%.
Bootstrap support for Q290C3 as seed ortholog is 100%.

Group of orthologs #1750. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 D.pseudoobscura:233

F6VSD5              	100.00%		Q29M85              	100.00%
Bootstrap support for F6VSD5 as seed ortholog is 100%.
Bootstrap support for Q29M85 as seed ortholog is 100%.

Group of orthologs #1751. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 D.pseudoobscura:295

H2XQ25              	100.00%		Q28YP8              	100.00%
Bootstrap support for H2XQ25 as seed ortholog is 100%.
Bootstrap support for Q28YP8 as seed ortholog is 100%.

Group of orthologs #1752. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 D.pseudoobscura:135

F6ZKW1              	100.00%		Q29HL0              	100.00%
Bootstrap support for F6ZKW1 as seed ortholog is 100%.
Bootstrap support for Q29HL0 as seed ortholog is 100%.

Group of orthologs #1753. Best score 295 bits
Score difference with first non-orthologous sequence - C.intestinalis:295 D.pseudoobscura:295

F7AZB8              	100.00%		Q29KJ5              	100.00%
Bootstrap support for F7AZB8 as seed ortholog is 100%.
Bootstrap support for Q29KJ5 as seed ortholog is 100%.

Group of orthologs #1754. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 D.pseudoobscura:136

F6VHL9              	100.00%		Q295F7              	100.00%
                    	       		B5DLJ0              	5.46%
Bootstrap support for F6VHL9 as seed ortholog is 100%.
Bootstrap support for Q295F7 as seed ortholog is 99%.

Group of orthologs #1755. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 D.pseudoobscura:94

F6WRV9              	100.00%		Q29J67              	100.00%
F6YHL8              	34.40%		
Bootstrap support for F6WRV9 as seed ortholog is 100%.
Bootstrap support for Q29J67 as seed ortholog is 97%.

Group of orthologs #1756. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 D.pseudoobscura:294

F6STU7              	100.00%		B5DRI8              	100.00%
Bootstrap support for F6STU7 as seed ortholog is 100%.
Bootstrap support for B5DRI8 as seed ortholog is 100%.

Group of orthologs #1757. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 D.pseudoobscura:95

F6TJ76              	100.00%		Q294H4              	100.00%
Bootstrap support for F6TJ76 as seed ortholog is 100%.
Bootstrap support for Q294H4 as seed ortholog is 99%.

Group of orthologs #1758. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 D.pseudoobscura:294

H2XM76              	100.00%		B5DXH1              	100.00%
Bootstrap support for H2XM76 as seed ortholog is 100%.
Bootstrap support for B5DXH1 as seed ortholog is 100%.

Group of orthologs #1759. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 D.pseudoobscura:294

H2XX92              	100.00%		B5DNY9              	100.00%
Bootstrap support for H2XX92 as seed ortholog is 100%.
Bootstrap support for B5DNY9 as seed ortholog is 100%.

Group of orthologs #1760. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 D.pseudoobscura:187

Q4H3J8              	100.00%		B5DR68              	100.00%
Bootstrap support for Q4H3J8 as seed ortholog is 100%.
Bootstrap support for B5DR68 as seed ortholog is 100%.

Group of orthologs #1761. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 D.pseudoobscura:294

F7B5Q2              	100.00%		Q29NU4              	100.00%
Bootstrap support for F7B5Q2 as seed ortholog is 100%.
Bootstrap support for Q29NU4 as seed ortholog is 100%.

Group of orthologs #1762. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 D.pseudoobscura:294

F7AP04              	100.00%		Q2LZ30              	100.00%
Bootstrap support for F7AP04 as seed ortholog is 100%.
Bootstrap support for Q2LZ30 as seed ortholog is 100%.

Group of orthologs #1763. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 D.pseudoobscura:226

Q4H2Q6              	100.00%		Q29CQ4              	100.00%
Bootstrap support for Q4H2Q6 as seed ortholog is 100%.
Bootstrap support for Q29CQ4 as seed ortholog is 100%.

Group of orthologs #1764. Best score 294 bits
Score difference with first non-orthologous sequence - C.intestinalis:294 D.pseudoobscura:294

Q4H3W9              	100.00%		Q29F10              	100.00%
Bootstrap support for Q4H3W9 as seed ortholog is 100%.
Bootstrap support for Q29F10 as seed ortholog is 100%.

Group of orthologs #1765. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 D.pseudoobscura:293

F6XYB7              	100.00%		B5E0V3              	100.00%
Bootstrap support for F6XYB7 as seed ortholog is 100%.
Bootstrap support for B5E0V3 as seed ortholog is 100%.

Group of orthologs #1766. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 D.pseudoobscura:143

F6XKZ6              	100.00%		Q292G6              	100.00%
Bootstrap support for F6XKZ6 as seed ortholog is 100%.
Bootstrap support for Q292G6 as seed ortholog is 99%.

Group of orthologs #1767. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 D.pseudoobscura:293

F6X1E1              	100.00%		Q295G6              	100.00%
Bootstrap support for F6X1E1 as seed ortholog is 100%.
Bootstrap support for Q295G6 as seed ortholog is 100%.

Group of orthologs #1768. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 D.pseudoobscura:293

F6ZD00              	100.00%		Q290W2              	100.00%
Bootstrap support for F6ZD00 as seed ortholog is 100%.
Bootstrap support for Q290W2 as seed ortholog is 100%.

Group of orthologs #1769. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 D.pseudoobscura:293

F6WS50              	100.00%		Q29K06              	100.00%
Bootstrap support for F6WS50 as seed ortholog is 100%.
Bootstrap support for Q29K06 as seed ortholog is 100%.

Group of orthologs #1770. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 D.pseudoobscura:293

F6VIB4              	100.00%		Q2LYY3              	100.00%
Bootstrap support for F6VIB4 as seed ortholog is 100%.
Bootstrap support for Q2LYY3 as seed ortholog is 100%.

Group of orthologs #1771. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 D.pseudoobscura:293

F6ZUH0              	100.00%		Q29GQ1              	100.00%
Bootstrap support for F6ZUH0 as seed ortholog is 100%.
Bootstrap support for Q29GQ1 as seed ortholog is 100%.

Group of orthologs #1772. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 D.pseudoobscura:293

F7AUJ8              	100.00%		Q29EG8              	100.00%
Bootstrap support for F7AUJ8 as seed ortholog is 78%.
Bootstrap support for Q29EG8 as seed ortholog is 100%.

Group of orthologs #1773. Best score 293 bits
Score difference with first non-orthologous sequence - C.intestinalis:293 D.pseudoobscura:293

H2Y124              	100.00%		Q29GG5              	100.00%
Bootstrap support for H2Y124 as seed ortholog is 100%.
Bootstrap support for Q29GG5 as seed ortholog is 100%.

Group of orthologs #1774. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 D.pseudoobscura:292

H2XTA5              	100.00%		Q29CS1              	100.00%
F6R8R2              	32.55%		
F6R8U2              	29.00%		
F7ARX5              	23.49%		
F6UCV3              	22.05%		
H2XZG6              	21.78%		
Bootstrap support for H2XTA5 as seed ortholog is 100%.
Bootstrap support for Q29CS1 as seed ortholog is 100%.

Group of orthologs #1775. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 D.pseudoobscura:292

F6V899              	100.00%		Q28WN4              	100.00%
Bootstrap support for F6V899 as seed ortholog is 100%.
Bootstrap support for Q28WN4 as seed ortholog is 100%.

Group of orthologs #1776. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 D.pseudoobscura:292

F6WZ68              	100.00%		Q28YJ9              	100.00%
Bootstrap support for F6WZ68 as seed ortholog is 100%.
Bootstrap support for Q28YJ9 as seed ortholog is 100%.

Group of orthologs #1777. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 D.pseudoobscura:292

F6VFD2              	100.00%		Q297G0              	100.00%
Bootstrap support for F6VFD2 as seed ortholog is 100%.
Bootstrap support for Q297G0 as seed ortholog is 100%.

Group of orthologs #1778. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 D.pseudoobscura:292

F6U936              	100.00%		Q29IC4              	100.00%
Bootstrap support for F6U936 as seed ortholog is 100%.
Bootstrap support for Q29IC4 as seed ortholog is 100%.

Group of orthologs #1779. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 D.pseudoobscura:292

F7BMB7              	100.00%		Q291Y0              	100.00%
Bootstrap support for F7BMB7 as seed ortholog is 100%.
Bootstrap support for Q291Y0 as seed ortholog is 100%.

Group of orthologs #1780. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:292 D.pseudoobscura:292

F6YYA5              	100.00%		Q29P66              	100.00%
Bootstrap support for F6YYA5 as seed ortholog is 100%.
Bootstrap support for Q29P66 as seed ortholog is 100%.

Group of orthologs #1781. Best score 292 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 D.pseudoobscura:9

Q9U6V0              	100.00%		Q29N82              	100.00%
Bootstrap support for Q9U6V0 as seed ortholog is 33%.
Alternative seed ortholog is Q4H2M5 (17 bits away from this cluster)
Bootstrap support for Q29N82 as seed ortholog is 52%.
Alternative seed ortholog is Q28Y41 (9 bits away from this cluster)

Group of orthologs #1782. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 D.pseudoobscura:65

F6T2C1              	100.00%		B5DZG9              	100.00%
Bootstrap support for F6T2C1 as seed ortholog is 56%.
Alternative seed ortholog is F6T2A6 (1 bits away from this cluster)
Bootstrap support for B5DZG9 as seed ortholog is 100%.

Group of orthologs #1783. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 D.pseudoobscura:291

F6XBT4              	100.00%		Q292L7              	100.00%
Bootstrap support for F6XBT4 as seed ortholog is 100%.
Bootstrap support for Q292L7 as seed ortholog is 100%.

Group of orthologs #1784. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 D.pseudoobscura:291

F6ZCL3              	100.00%		Q29C12              	100.00%
Bootstrap support for F6ZCL3 as seed ortholog is 100%.
Bootstrap support for Q29C12 as seed ortholog is 100%.

Group of orthologs #1785. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 D.pseudoobscura:291

F7A8L8              	100.00%		Q29BJ9              	100.00%
Bootstrap support for F7A8L8 as seed ortholog is 100%.
Bootstrap support for Q29BJ9 as seed ortholog is 100%.

Group of orthologs #1786. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:291 D.pseudoobscura:81

F6WPT0              	100.00%		Q2M0D5              	100.00%
Bootstrap support for F6WPT0 as seed ortholog is 100%.
Bootstrap support for Q2M0D5 as seed ortholog is 98%.

Group of orthologs #1787. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:107

F6ZX23              	100.00%		Q29KQ1              	100.00%
Bootstrap support for F6ZX23 as seed ortholog is 100%.
Bootstrap support for Q29KQ1 as seed ortholog is 100%.

Group of orthologs #1788. Best score 291 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 D.pseudoobscura:128

H2XKK7              	100.00%		Q29ES8              	100.00%
Bootstrap support for H2XKK7 as seed ortholog is 84%.
Bootstrap support for Q29ES8 as seed ortholog is 100%.

Group of orthologs #1789. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 D.pseudoobscura:290

I6L212              	100.00%		Q291H4              	100.00%
                    	       		Q297F5              	11.26%
Bootstrap support for I6L212 as seed ortholog is 100%.
Bootstrap support for Q291H4 as seed ortholog is 100%.

Group of orthologs #1790. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 D.pseudoobscura:290

F6U182              	100.00%		Q292Z2              	100.00%
Bootstrap support for F6U182 as seed ortholog is 100%.
Bootstrap support for Q292Z2 as seed ortholog is 100%.

Group of orthologs #1791. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 D.pseudoobscura:290

F6UJD6              	100.00%		Q29D54              	100.00%
Bootstrap support for F6UJD6 as seed ortholog is 100%.
Bootstrap support for Q29D54 as seed ortholog is 100%.

Group of orthologs #1792. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 D.pseudoobscura:290

F6Y5N8              	100.00%		Q295J8              	100.00%
Bootstrap support for F6Y5N8 as seed ortholog is 100%.
Bootstrap support for Q295J8 as seed ortholog is 100%.

Group of orthologs #1793. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 D.pseudoobscura:290

H2XRN7              	100.00%		Q29PN8              	100.00%
Bootstrap support for H2XRN7 as seed ortholog is 100%.
Bootstrap support for Q29PN8 as seed ortholog is 100%.

Group of orthologs #1794. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 D.pseudoobscura:193

H2Y0K9              	100.00%		Q29PJ1              	100.00%
Bootstrap support for H2Y0K9 as seed ortholog is 100%.
Bootstrap support for Q29PJ1 as seed ortholog is 100%.

Group of orthologs #1795. Best score 290 bits
Score difference with first non-orthologous sequence - C.intestinalis:290 D.pseudoobscura:290

Q4H3E2              	100.00%		Q2LYN4              	100.00%
Bootstrap support for Q4H3E2 as seed ortholog is 100%.
Bootstrap support for Q2LYN4 as seed ortholog is 100%.

Group of orthologs #1796. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 D.pseudoobscura:102

F6XGI2              	100.00%		Q29EV5              	100.00%
F6REF5              	40.23%		B5DLJ3              	22.57%
F7AV16              	13.03%		
Bootstrap support for F6XGI2 as seed ortholog is 100%.
Bootstrap support for Q29EV5 as seed ortholog is 99%.

Group of orthologs #1797. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 D.pseudoobscura:233

F6QZ03              	100.00%		Q295B2              	100.00%
                    	       		B5DVX0              	45.75%
Bootstrap support for F6QZ03 as seed ortholog is 100%.
Bootstrap support for Q295B2 as seed ortholog is 100%.

Group of orthologs #1798. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 D.pseudoobscura:289

F6Q4Z2              	100.00%		Q299A3              	100.00%
Bootstrap support for F6Q4Z2 as seed ortholog is 100%.
Bootstrap support for Q299A3 as seed ortholog is 100%.

Group of orthologs #1799. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:289 D.pseudoobscura:289

F6RHG2              	100.00%		Q29LH2              	100.00%
Bootstrap support for F6RHG2 as seed ortholog is 100%.
Bootstrap support for Q29LH2 as seed ortholog is 100%.

Group of orthologs #1800. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 D.pseudoobscura:41

F7A7A0              	100.00%		Q297L4              	100.00%
Bootstrap support for F7A7A0 as seed ortholog is 99%.
Bootstrap support for Q297L4 as seed ortholog is 90%.

Group of orthologs #1801. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 D.pseudoobscura:289

F6Y8Y8              	100.00%		Q29J33              	100.00%
Bootstrap support for F6Y8Y8 as seed ortholog is 100%.
Bootstrap support for Q29J33 as seed ortholog is 100%.

Group of orthologs #1802. Best score 289 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 D.pseudoobscura:289

F7AAS8              	100.00%		Q29DI9              	100.00%
Bootstrap support for F7AAS8 as seed ortholog is 99%.
Bootstrap support for Q29DI9 as seed ortholog is 100%.

Group of orthologs #1803. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 D.pseudoobscura:24

F6V9C5              	100.00%		Q29NV3              	100.00%
                    	       		B5DHS3              	40.08%
Bootstrap support for F6V9C5 as seed ortholog is 100%.
Bootstrap support for Q29NV3 as seed ortholog is 80%.

Group of orthologs #1804. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 D.pseudoobscura:178

F6PIE8              	100.00%		Q28XV6              	100.00%
Bootstrap support for F6PIE8 as seed ortholog is 100%.
Bootstrap support for Q28XV6 as seed ortholog is 100%.

Group of orthologs #1805. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 D.pseudoobscura:288

F6SSN4              	100.00%		Q28X71              	100.00%
Bootstrap support for F6SSN4 as seed ortholog is 100%.
Bootstrap support for Q28X71 as seed ortholog is 100%.

Group of orthologs #1806. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 D.pseudoobscura:28

F6TQG1              	100.00%		Q297I1              	100.00%
Bootstrap support for F6TQG1 as seed ortholog is 100%.
Bootstrap support for Q297I1 as seed ortholog is 81%.

Group of orthologs #1807. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 D.pseudoobscura:288

F6VYS2              	100.00%		Q29BS0              	100.00%
Bootstrap support for F6VYS2 as seed ortholog is 100%.
Bootstrap support for Q29BS0 as seed ortholog is 100%.

Group of orthologs #1808. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 D.pseudoobscura:288

F7BA39              	100.00%		Q28Z17              	100.00%
Bootstrap support for F7BA39 as seed ortholog is 100%.
Bootstrap support for Q28Z17 as seed ortholog is 100%.

Group of orthologs #1809. Best score 288 bits
Score difference with first non-orthologous sequence - C.intestinalis:288 D.pseudoobscura:288

F6XWN6              	100.00%		Q29HR5              	100.00%
Bootstrap support for F6XWN6 as seed ortholog is 100%.
Bootstrap support for Q29HR5 as seed ortholog is 100%.

Group of orthologs #1810. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 D.pseudoobscura:287

F6U6Z4              	100.00%		B5DPC2              	100.00%
Bootstrap support for F6U6Z4 as seed ortholog is 100%.
Bootstrap support for B5DPC2 as seed ortholog is 100%.

Group of orthologs #1811. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 D.pseudoobscura:122

F6Y5B7              	100.00%		B5DVF8              	100.00%
Bootstrap support for F6Y5B7 as seed ortholog is 96%.
Bootstrap support for B5DVF8 as seed ortholog is 100%.

Group of orthologs #1812. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 D.pseudoobscura:287

F6XH93              	100.00%		Q28ZX6              	100.00%
Bootstrap support for F6XH93 as seed ortholog is 100%.
Bootstrap support for Q28ZX6 as seed ortholog is 100%.

Group of orthologs #1813. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 D.pseudoobscura:287

F6WGN7              	100.00%		Q29CG7              	100.00%
Bootstrap support for F6WGN7 as seed ortholog is 100%.
Bootstrap support for Q29CG7 as seed ortholog is 100%.

Group of orthologs #1814. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 D.pseudoobscura:191

F6YGK4              	100.00%		Q29GU3              	100.00%
Bootstrap support for F6YGK4 as seed ortholog is 100%.
Bootstrap support for Q29GU3 as seed ortholog is 100%.

Group of orthologs #1815. Best score 287 bits
Score difference with first non-orthologous sequence - C.intestinalis:287 D.pseudoobscura:287

F6WN54              	100.00%		Q29LE4              	100.00%
Bootstrap support for F6WN54 as seed ortholog is 100%.
Bootstrap support for Q29LE4 as seed ortholog is 100%.

Group of orthologs #1816. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 D.pseudoobscura:99

F6U1C4              	100.00%		B5DRX8              	100.00%
Bootstrap support for F6U1C4 as seed ortholog is 99%.
Bootstrap support for B5DRX8 as seed ortholog is 99%.

Group of orthologs #1817. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 D.pseudoobscura:286

F6SA18              	100.00%		Q29EP0              	100.00%
Bootstrap support for F6SA18 as seed ortholog is 100%.
Bootstrap support for Q29EP0 as seed ortholog is 100%.

Group of orthologs #1818. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 D.pseudoobscura:286

F6X0L7              	100.00%		Q298G1              	100.00%
Bootstrap support for F6X0L7 as seed ortholog is 100%.
Bootstrap support for Q298G1 as seed ortholog is 100%.

Group of orthologs #1819. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 D.pseudoobscura:126

F6Y7E9              	100.00%		Q29NI0              	100.00%
Bootstrap support for F6Y7E9 as seed ortholog is 100%.
Bootstrap support for Q29NI0 as seed ortholog is 99%.

Group of orthologs #1820. Best score 286 bits
Score difference with first non-orthologous sequence - C.intestinalis:286 D.pseudoobscura:286

H2XY38              	100.00%		Q28YQ7              	100.00%
Bootstrap support for H2XY38 as seed ortholog is 100%.
Bootstrap support for Q28YQ7 as seed ortholog is 100%.

Group of orthologs #1821. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 D.pseudoobscura:6

F7AR57              	100.00%		B5DL89              	100.00%
                    	       		B5DL87              	57.56%
                    	       		Q29B07              	42.11%
                    	       		B5DY92              	37.20%
                    	       		B5DY93              	35.81%
                    	       		B5DZ88              	34.67%
                    	       		B5DY94              	34.01%
                    	       		B5DY95              	33.77%
                    	       		B5E0C4              	19.54%
                    	       		B5DNQ9              	12.84%
Bootstrap support for F7AR57 as seed ortholog is 100%.
Bootstrap support for B5DL89 as seed ortholog is 56%.
Alternative seed ortholog is B5DU10 (6 bits away from this cluster)

Group of orthologs #1822. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 D.pseudoobscura:285

F6QFM3              	100.00%		B5DM77              	100.00%
Bootstrap support for F6QFM3 as seed ortholog is 100%.
Bootstrap support for B5DM77 as seed ortholog is 100%.

Group of orthologs #1823. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 D.pseudoobscura:285

F6RVB8              	100.00%		Q28XL0              	100.00%
Bootstrap support for F6RVB8 as seed ortholog is 100%.
Bootstrap support for Q28XL0 as seed ortholog is 100%.

Group of orthologs #1824. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 D.pseudoobscura:141

F6S1K1              	100.00%		Q297T6              	100.00%
Bootstrap support for F6S1K1 as seed ortholog is 100%.
Bootstrap support for Q297T6 as seed ortholog is 100%.

Group of orthologs #1825. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:285 D.pseudoobscura:285

F7ALU8              	100.00%		B5E050              	100.00%
Bootstrap support for F7ALU8 as seed ortholog is 100%.
Bootstrap support for B5E050 as seed ortholog is 100%.

Group of orthologs #1826. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 D.pseudoobscura:285

F7AEB8              	100.00%		Q28WX2              	100.00%
Bootstrap support for F7AEB8 as seed ortholog is 98%.
Bootstrap support for Q28WX2 as seed ortholog is 100%.

Group of orthologs #1827. Best score 285 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 D.pseudoobscura:232

F6YD53              	100.00%		Q29CI3              	100.00%
Bootstrap support for F6YD53 as seed ortholog is 100%.
Bootstrap support for Q29CI3 as seed ortholog is 100%.

Group of orthologs #1828. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 D.pseudoobscura:72

F6XQX8              	100.00%		Q292K9              	100.00%
Bootstrap support for F6XQX8 as seed ortholog is 99%.
Bootstrap support for Q292K9 as seed ortholog is 97%.

Group of orthologs #1829. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:284 D.pseudoobscura:284

F6WW70              	100.00%		Q297L5              	100.00%
Bootstrap support for F6WW70 as seed ortholog is 100%.
Bootstrap support for Q297L5 as seed ortholog is 100%.

Group of orthologs #1830. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 D.pseudoobscura:164

H2XLH6              	100.00%		B5E0D5              	100.00%
Bootstrap support for H2XLH6 as seed ortholog is 93%.
Bootstrap support for B5E0D5 as seed ortholog is 100%.

Group of orthologs #1831. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 D.pseudoobscura:53

F6WKA4              	100.00%		Q29N84              	100.00%
Bootstrap support for F6WKA4 as seed ortholog is 81%.
Bootstrap support for Q29N84 as seed ortholog is 59%.
Alternative seed ortholog is Q28Y41 (53 bits away from this cluster)

Group of orthologs #1832. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:174

F7BHL8              	100.00%		Q29JA8              	100.00%
Bootstrap support for F7BHL8 as seed ortholog is 99%.
Bootstrap support for Q29JA8 as seed ortholog is 99%.

Group of orthologs #1833. Best score 284 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:134

H2Y1T5              	100.00%		Q29FJ2              	100.00%
Bootstrap support for H2Y1T5 as seed ortholog is 99%.
Bootstrap support for Q29FJ2 as seed ortholog is 99%.

Group of orthologs #1834. Best score 283 bits
Score difference with first non-orthologous sequence - C.intestinalis:283 D.pseudoobscura:283

H2XWU7              	100.00%		Q294R9              	100.00%
Bootstrap support for H2XWU7 as seed ortholog is 100%.
Bootstrap support for Q294R9 as seed ortholog is 100%.

Group of orthologs #1835. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 D.pseudoobscura:149

H2XUS4              	100.00%		Q29B20              	100.00%
                    	       		B5DNH3              	61.38%
                    	       		Q29B21              	55.45%
                    	       		B5DXL8              	36.33%
                    	       		B5DYR4              	33.65%
                    	       		Q2LZY6              	33.27%
                    	       		Q29A09              	16.44%
                    	       		Q29C25              	11.47%
                    	       		Q29C24              	7.46%
Bootstrap support for H2XUS4 as seed ortholog is 100%.
Bootstrap support for Q29B20 as seed ortholog is 99%.

Group of orthologs #1836. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 D.pseudoobscura:282

F6Z7E0              	100.00%		B5DNH2              	100.00%
Bootstrap support for F6Z7E0 as seed ortholog is 100%.
Bootstrap support for B5DNH2 as seed ortholog is 100%.

Group of orthologs #1837. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 D.pseudoobscura:282

F6TNU2              	100.00%		Q292P3              	100.00%
Bootstrap support for F6TNU2 as seed ortholog is 100%.
Bootstrap support for Q292P3 as seed ortholog is 100%.

Group of orthologs #1838. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 D.pseudoobscura:282

F7ATS3              	100.00%		B5DSC1              	100.00%
Bootstrap support for F7ATS3 as seed ortholog is 100%.
Bootstrap support for B5DSC1 as seed ortholog is 100%.

Group of orthologs #1839. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 D.pseudoobscura:217

F6Y321              	100.00%		Q298K6              	100.00%
Bootstrap support for F6Y321 as seed ortholog is 100%.
Bootstrap support for Q298K6 as seed ortholog is 100%.

Group of orthologs #1840. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 D.pseudoobscura:282

F7AEF1              	100.00%		Q29I91              	100.00%
Bootstrap support for F7AEF1 as seed ortholog is 100%.
Bootstrap support for Q29I91 as seed ortholog is 100%.

Group of orthologs #1841. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:282 D.pseudoobscura:282

H2Y1M1              	100.00%		Q295C3              	100.00%
Bootstrap support for H2Y1M1 as seed ortholog is 100%.
Bootstrap support for Q295C3 as seed ortholog is 100%.

Group of orthologs #1842. Best score 282 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 D.pseudoobscura:282

H2XZQ0              	100.00%		Q29A78              	100.00%
Bootstrap support for H2XZQ0 as seed ortholog is 100%.
Bootstrap support for Q29A78 as seed ortholog is 100%.

Group of orthologs #1843. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 D.pseudoobscura:281

F6X618              	100.00%		B5DXG4              	100.00%
                    	       		B5DXW9              	23.61%
Bootstrap support for F6X618 as seed ortholog is 100%.
Bootstrap support for B5DXG4 as seed ortholog is 100%.

Group of orthologs #1844. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 D.pseudoobscura:17

F6W1D2              	100.00%		Q296A7              	100.00%
                    	       		B5DWF9              	17.18%
Bootstrap support for F6W1D2 as seed ortholog is 100%.
Bootstrap support for Q296A7 as seed ortholog is 61%.
Alternative seed ortholog is Q29HN7 (17 bits away from this cluster)

Group of orthologs #1845. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 D.pseudoobscura:281

F6T7Q1              	100.00%		B5DQE9              	100.00%
Bootstrap support for F6T7Q1 as seed ortholog is 100%.
Bootstrap support for B5DQE9 as seed ortholog is 100%.

Group of orthologs #1846. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 D.pseudoobscura:230

F6S4C0              	100.00%		Q29GD7              	100.00%
Bootstrap support for F6S4C0 as seed ortholog is 100%.
Bootstrap support for Q29GD7 as seed ortholog is 100%.

Group of orthologs #1847. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 D.pseudoobscura:127

F6UJQ6              	100.00%		Q29LV4              	100.00%
Bootstrap support for F6UJQ6 as seed ortholog is 100%.
Bootstrap support for Q29LV4 as seed ortholog is 99%.

Group of orthologs #1848. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 D.pseudoobscura:281

F7AJZ2              	100.00%		Q297S2              	100.00%
Bootstrap support for F7AJZ2 as seed ortholog is 100%.
Bootstrap support for Q297S2 as seed ortholog is 100%.

Group of orthologs #1849. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 D.pseudoobscura:281

H2XP72              	100.00%		Q28X32              	100.00%
Bootstrap support for H2XP72 as seed ortholog is 100%.
Bootstrap support for Q28X32 as seed ortholog is 100%.

Group of orthologs #1850. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 D.pseudoobscura:281

F7B8G2              	100.00%		Q29HG2              	100.00%
Bootstrap support for F7B8G2 as seed ortholog is 100%.
Bootstrap support for Q29HG2 as seed ortholog is 100%.

Group of orthologs #1851. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 D.pseudoobscura:281

H2XYT3              	100.00%		Q29I16              	100.00%
Bootstrap support for H2XYT3 as seed ortholog is 100%.
Bootstrap support for Q29I16 as seed ortholog is 100%.

Group of orthologs #1852. Best score 281 bits
Score difference with first non-orthologous sequence - C.intestinalis:281 D.pseudoobscura:281

H2XUL1              	100.00%		Q29NY9              	100.00%
Bootstrap support for H2XUL1 as seed ortholog is 100%.
Bootstrap support for Q29NY9 as seed ortholog is 100%.

Group of orthologs #1853. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 D.pseudoobscura:93

F7B9K0              	100.00%		Q29FZ2              	100.00%
F6ZNW9              	44.07%		
H2XRT7              	43.94%		
H2Y2D9              	42.05%		
F6TL47              	41.11%		
F6TL65              	36.52%		
F7BB38              	36.25%		
F7A0M9              	22.24%		
F6PUR6              	16.85%		
H2XJM1              	14.42%		
L7N0S0              	13.88%		
H2XXR0              	13.88%		
F6PLM8              	13.21%		
H2XMC8              	11.86%		
H2XVS1              	11.73%		
H2Y171              	11.73%		
F6RLR6              	10.24%		
F6WRT4              	9.43%		
F6QC31              	9.30%		
F6THU3              	9.03%		
F6WNP2              	8.49%		
F6ZI41              	7.68%		
F7A8I5              	7.01%		
F7AR76              	5.93%		
H2Y3A4              	5.53%		
Bootstrap support for F7B9K0 as seed ortholog is 71%.
Alternative seed ortholog is F6VYD7 (28 bits away from this cluster)
Bootstrap support for Q29FZ2 as seed ortholog is 96%.

Group of orthologs #1854. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 D.pseudoobscura:280

F6TT57              	100.00%		B5DQ54              	100.00%
Bootstrap support for F6TT57 as seed ortholog is 100%.
Bootstrap support for B5DQ54 as seed ortholog is 100%.

Group of orthologs #1855. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 D.pseudoobscura:280

F6RZU6              	100.00%		B5DYK6              	100.00%
Bootstrap support for F6RZU6 as seed ortholog is 100%.
Bootstrap support for B5DYK6 as seed ortholog is 100%.

Group of orthologs #1856. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 D.pseudoobscura:198

F6UQ99              	100.00%		Q29AF9              	100.00%
Bootstrap support for F6UQ99 as seed ortholog is 100%.
Bootstrap support for Q29AF9 as seed ortholog is 100%.

Group of orthologs #1857. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 D.pseudoobscura:132

F6ZRB6              	100.00%		B5E188              	100.00%
Bootstrap support for F6ZRB6 as seed ortholog is 100%.
Bootstrap support for B5E188 as seed ortholog is 100%.

Group of orthologs #1858. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 D.pseudoobscura:280

F6YLQ9              	100.00%		Q29FB8              	100.00%
Bootstrap support for F6YLQ9 as seed ortholog is 100%.
Bootstrap support for Q29FB8 as seed ortholog is 100%.

Group of orthologs #1859. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 D.pseudoobscura:151

F6W1C5              	100.00%		Q29NL5              	100.00%
Bootstrap support for F6W1C5 as seed ortholog is 100%.
Bootstrap support for Q29NL5 as seed ortholog is 99%.

Group of orthologs #1860. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 D.pseudoobscura:280

H2XXA8              	100.00%		Q29DL9              	100.00%
Bootstrap support for H2XXA8 as seed ortholog is 100%.
Bootstrap support for Q29DL9 as seed ortholog is 100%.

Group of orthologs #1861. Best score 280 bits
Score difference with first non-orthologous sequence - C.intestinalis:280 D.pseudoobscura:280

H2Y3R2              	100.00%		Q29LY8              	100.00%
Bootstrap support for H2Y3R2 as seed ortholog is 100%.
Bootstrap support for Q29LY8 as seed ortholog is 100%.

Group of orthologs #1862. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 D.pseudoobscura:65

F6ZST9              	100.00%		Q29JL5              	100.00%
                    	       		Q2LZU9              	18.07%
                    	       		Q292Z0              	6.85%
Bootstrap support for F6ZST9 as seed ortholog is 63%.
Alternative seed ortholog is F6WJT4 (8 bits away from this cluster)
Bootstrap support for Q29JL5 as seed ortholog is 94%.

Group of orthologs #1863. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 D.pseudoobscura:279

F6VLB7              	100.00%		B5DNF4              	100.00%
                    	       		B5DJ21              	74.26%
Bootstrap support for F6VLB7 as seed ortholog is 100%.
Bootstrap support for B5DNF4 as seed ortholog is 100%.

Group of orthologs #1864. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 D.pseudoobscura:279

F6X0N8              	100.00%		Q296T6              	100.00%
L7N0S6              	68.24%		
Bootstrap support for F6X0N8 as seed ortholog is 100%.
Bootstrap support for Q296T6 as seed ortholog is 100%.

Group of orthologs #1865. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 D.pseudoobscura:279

F6WJ25              	100.00%		Q29G95              	100.00%
                    	       		B5DZ63              	10.08%
Bootstrap support for F6WJ25 as seed ortholog is 100%.
Bootstrap support for Q29G95 as seed ortholog is 100%.

Group of orthologs #1866. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 D.pseudoobscura:279

F6VI88              	100.00%		B5DHB3              	100.00%
Bootstrap support for F6VI88 as seed ortholog is 100%.
Bootstrap support for B5DHB3 as seed ortholog is 100%.

Group of orthologs #1867. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 D.pseudoobscura:279

C4B8X4              	100.00%		Q290B1              	100.00%
Bootstrap support for C4B8X4 as seed ortholog is 100%.
Bootstrap support for Q290B1 as seed ortholog is 100%.

Group of orthologs #1868. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 D.pseudoobscura:279

F6SFI7              	100.00%		Q29BE2              	100.00%
Bootstrap support for F6SFI7 as seed ortholog is 100%.
Bootstrap support for Q29BE2 as seed ortholog is 100%.

Group of orthologs #1869. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 D.pseudoobscura:279

F6VXM8              	100.00%		Q290F1              	100.00%
Bootstrap support for F6VXM8 as seed ortholog is 100%.
Bootstrap support for Q290F1 as seed ortholog is 100%.

Group of orthologs #1870. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 D.pseudoobscura:279

F6UX10              	100.00%		Q29FM5              	100.00%
Bootstrap support for F6UX10 as seed ortholog is 100%.
Bootstrap support for Q29FM5 as seed ortholog is 100%.

Group of orthologs #1871. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 D.pseudoobscura:279

F6Z541              	100.00%		Q299N5              	100.00%
Bootstrap support for F6Z541 as seed ortholog is 100%.
Bootstrap support for Q299N5 as seed ortholog is 100%.

Group of orthologs #1872. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:110

H2XRD4              	100.00%		Q298G2              	100.00%
Bootstrap support for H2XRD4 as seed ortholog is 100%.
Bootstrap support for Q298G2 as seed ortholog is 100%.

Group of orthologs #1873. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 D.pseudoobscura:279

Q8HIN3              	100.00%		D2SXZ2              	100.00%
Bootstrap support for Q8HIN3 as seed ortholog is 100%.
Bootstrap support for D2SXZ2 as seed ortholog is 100%.

Group of orthologs #1874. Best score 279 bits
Score difference with first non-orthologous sequence - C.intestinalis:279 D.pseudoobscura:279

H2XWD3              	100.00%		Q29FA5              	100.00%
Bootstrap support for H2XWD3 as seed ortholog is 100%.
Bootstrap support for Q29FA5 as seed ortholog is 100%.

Group of orthologs #1875. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 D.pseudoobscura:85

F6W0H5              	100.00%		B5DJA3              	100.00%
F6R6Q8              	5.87%		B5DHW8              	32.51%
                    	       		B5DJ65              	17.72%
                    	       		B5DJ99              	14.79%
                    	       		B5DKC9              	7.40%
                    	       		B5DKC8              	5.08%
Bootstrap support for F6W0H5 as seed ortholog is 83%.
Bootstrap support for B5DJA3 as seed ortholog is 98%.

Group of orthologs #1876. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 D.pseudoobscura:186

H2XMB6              	100.00%		Q29N51              	100.00%
                    	       		B5DI15              	16.95%
Bootstrap support for H2XMB6 as seed ortholog is 100%.
Bootstrap support for Q29N51 as seed ortholog is 100%.

Group of orthologs #1877. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 D.pseudoobscura:87

F6TXN5              	100.00%		Q29HA5              	100.00%
Bootstrap support for F6TXN5 as seed ortholog is 100%.
Bootstrap support for Q29HA5 as seed ortholog is 99%.

Group of orthologs #1878. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 D.pseudoobscura:278

F6XFA8              	100.00%		Q29LI3              	100.00%
Bootstrap support for F6XFA8 as seed ortholog is 100%.
Bootstrap support for Q29LI3 as seed ortholog is 100%.

Group of orthologs #1879. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 D.pseudoobscura:278

H2XRX5              	100.00%		Q293W9              	100.00%
Bootstrap support for H2XRX5 as seed ortholog is 100%.
Bootstrap support for Q293W9 as seed ortholog is 100%.

Group of orthologs #1880. Best score 278 bits
Score difference with first non-orthologous sequence - C.intestinalis:278 D.pseudoobscura:217

F7B2Q1              	100.00%		Q29NM4              	100.00%
Bootstrap support for F7B2Q1 as seed ortholog is 100%.
Bootstrap support for Q29NM4 as seed ortholog is 100%.

Group of orthologs #1881. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 D.pseudoobscura:233

F6RD78              	100.00%		Q29E69              	100.00%
                    	       		B5DWP3              	53.62%
                    	       		B5DR54              	23.51%
                    	       		B5DK99              	8.26%
Bootstrap support for F6RD78 as seed ortholog is 100%.
Bootstrap support for Q29E69 as seed ortholog is 100%.

Group of orthologs #1882. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 D.pseudoobscura:277

F6R8G4              	100.00%		B5DHS4              	100.00%
                    	       		Q29DH9              	100.00%
Bootstrap support for F6R8G4 as seed ortholog is 100%.
Bootstrap support for B5DHS4 as seed ortholog is 100%.
Bootstrap support for Q29DH9 as seed ortholog is 100%.

Group of orthologs #1883. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 D.pseudoobscura:277

F6XGL3              	100.00%		B5E0G3              	100.00%
                    	       		Q293S6              	10.87%
Bootstrap support for F6XGL3 as seed ortholog is 100%.
Bootstrap support for B5E0G3 as seed ortholog is 100%.

Group of orthologs #1884. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 D.pseudoobscura:277

F6PSK8              	100.00%		Q295Y7              	100.00%
Bootstrap support for F6PSK8 as seed ortholog is 100%.
Bootstrap support for Q295Y7 as seed ortholog is 100%.

Group of orthologs #1885. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 D.pseudoobscura:277

F6TGX7              	100.00%		Q29I17              	100.00%
Bootstrap support for F6TGX7 as seed ortholog is 100%.
Bootstrap support for Q29I17 as seed ortholog is 100%.

Group of orthologs #1886. Best score 277 bits
Score difference with first non-orthologous sequence - C.intestinalis:277 D.pseudoobscura:277

F6UE58              	100.00%		Q29N92              	100.00%
Bootstrap support for F6UE58 as seed ortholog is 100%.
Bootstrap support for Q29N92 as seed ortholog is 100%.

Group of orthologs #1887. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 D.pseudoobscura:276

F6R7I5              	100.00%		Q28YL8              	100.00%
Bootstrap support for F6R7I5 as seed ortholog is 100%.
Bootstrap support for Q28YL8 as seed ortholog is 100%.

Group of orthologs #1888. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 D.pseudoobscura:276

H2XVM3              	100.00%		B5E1K1              	100.00%
Bootstrap support for H2XVM3 as seed ortholog is 100%.
Bootstrap support for B5E1K1 as seed ortholog is 100%.

Group of orthologs #1889. Best score 276 bits
Score difference with first non-orthologous sequence - C.intestinalis:276 D.pseudoobscura:276

F6YIU9              	100.00%		Q29LG7              	100.00%
Bootstrap support for F6YIU9 as seed ortholog is 100%.
Bootstrap support for Q29LG7 as seed ortholog is 100%.

Group of orthologs #1890. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 D.pseudoobscura:221

F7BH30              	100.00%		Q29F58              	100.00%
F7B0A7              	40.47%		Q29F59              	27.44%
F6YFT9              	18.27%		Q296Q2              	6.08%
Bootstrap support for F7BH30 as seed ortholog is 100%.
Bootstrap support for Q29F58 as seed ortholog is 100%.

Group of orthologs #1891. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 D.pseudoobscura:275

F6QWP6              	100.00%		B5DQE3              	100.00%
                    	       		B5DPP5              	49.33%
                    	       		Q2M046              	26.87%
Bootstrap support for F6QWP6 as seed ortholog is 100%.
Bootstrap support for B5DQE3 as seed ortholog is 100%.

Group of orthologs #1892. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 D.pseudoobscura:275

H2XNC4              	100.00%		B5DSQ4              	100.00%
H2XUW8              	64.47%		
H2XQV4              	59.74%		
Bootstrap support for H2XNC4 as seed ortholog is 100%.
Bootstrap support for B5DSQ4 as seed ortholog is 100%.

Group of orthologs #1893. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 D.pseudoobscura:275

F6WGS7              	100.00%		Q29GG2              	100.00%
                    	       		Q29AB4              	18.44%
Bootstrap support for F6WGS7 as seed ortholog is 100%.
Bootstrap support for Q29GG2 as seed ortholog is 100%.

Group of orthologs #1894. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 D.pseudoobscura:275

F6R046              	100.00%		Q299G1              	100.00%
Bootstrap support for F6R046 as seed ortholog is 100%.
Bootstrap support for Q299G1 as seed ortholog is 100%.

Group of orthologs #1895. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 D.pseudoobscura:275

F6W023              	100.00%		B5E1K4              	100.00%
Bootstrap support for F6W023 as seed ortholog is 100%.
Bootstrap support for B5E1K4 as seed ortholog is 100%.

Group of orthologs #1896. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 D.pseudoobscura:170

F6RGE7              	100.00%		Q298N7              	100.00%
Bootstrap support for F6RGE7 as seed ortholog is 100%.
Bootstrap support for Q298N7 as seed ortholog is 100%.

Group of orthologs #1897. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 D.pseudoobscura:141

F6UMP0              	100.00%		Q28ZT9              	100.00%
Bootstrap support for F6UMP0 as seed ortholog is 100%.
Bootstrap support for Q28ZT9 as seed ortholog is 99%.

Group of orthologs #1898. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 D.pseudoobscura:275

F6WJQ0              	100.00%		Q29CT9              	100.00%
Bootstrap support for F6WJQ0 as seed ortholog is 100%.
Bootstrap support for Q29CT9 as seed ortholog is 100%.

Group of orthologs #1899. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 D.pseudoobscura:275

F7B499              	100.00%		Q28YM2              	100.00%
Bootstrap support for F7B499 as seed ortholog is 100%.
Bootstrap support for Q28YM2 as seed ortholog is 100%.

Group of orthologs #1900. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 D.pseudoobscura:275

F6YCP6              	100.00%		Q29C92              	100.00%
Bootstrap support for F6YCP6 as seed ortholog is 100%.
Bootstrap support for Q29C92 as seed ortholog is 100%.

Group of orthologs #1901. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 D.pseudoobscura:178

H2XP13              	100.00%		I5AN10              	100.00%
Bootstrap support for H2XP13 as seed ortholog is 100%.
Bootstrap support for I5AN10 as seed ortholog is 100%.

Group of orthologs #1902. Best score 275 bits
Score difference with first non-orthologous sequence - C.intestinalis:275 D.pseudoobscura:275

Q1RL32              	100.00%		Q29J13              	100.00%
Bootstrap support for Q1RL32 as seed ortholog is 100%.
Bootstrap support for Q29J13 as seed ortholog is 100%.

Group of orthologs #1903. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 D.pseudoobscura:208

F6PIZ2              	100.00%		B5DK47              	100.00%
                    	       		Q29P34              	34.71%
Bootstrap support for F6PIZ2 as seed ortholog is 100%.
Bootstrap support for B5DK47 as seed ortholog is 100%.

Group of orthologs #1904. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:222

F7A4L3              	100.00%		Q295T6              	100.00%
                    	       		Q295T5              	36.56%
Bootstrap support for F7A4L3 as seed ortholog is 100%.
Bootstrap support for Q295T6 as seed ortholog is 100%.

Group of orthologs #1905. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:274

F6S5I8              	100.00%		B5DRY7              	100.00%
Bootstrap support for F6S5I8 as seed ortholog is 100%.
Bootstrap support for B5DRY7 as seed ortholog is 100%.

Group of orthologs #1906. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:274

F6VUL9              	100.00%		B5DVA8              	100.00%
Bootstrap support for F6VUL9 as seed ortholog is 100%.
Bootstrap support for B5DVA8 as seed ortholog is 100%.

Group of orthologs #1907. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:274

F6V6S8              	100.00%		Q28WQ2              	100.00%
Bootstrap support for F6V6S8 as seed ortholog is 100%.
Bootstrap support for Q28WQ2 as seed ortholog is 100%.

Group of orthologs #1908. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:196

F6X139              	100.00%		B5E059              	100.00%
Bootstrap support for F6X139 as seed ortholog is 100%.
Bootstrap support for B5E059 as seed ortholog is 100%.

Group of orthologs #1909. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:274

F7APX0              	100.00%		Q28Z32              	100.00%
Bootstrap support for F7APX0 as seed ortholog is 100%.
Bootstrap support for Q28Z32 as seed ortholog is 100%.

Group of orthologs #1910. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:193

F6Z7L3              	100.00%		Q295Z2              	100.00%
Bootstrap support for F6Z7L3 as seed ortholog is 100%.
Bootstrap support for Q295Z2 as seed ortholog is 100%.

Group of orthologs #1911. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:274

F6VG38              	100.00%		Q29GS6              	100.00%
Bootstrap support for F6VG38 as seed ortholog is 100%.
Bootstrap support for Q29GS6 as seed ortholog is 100%.

Group of orthologs #1912. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:274

F7B503              	100.00%		Q28Z26              	100.00%
Bootstrap support for F7B503 as seed ortholog is 100%.
Bootstrap support for Q28Z26 as seed ortholog is 100%.

Group of orthologs #1913. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:205

F7AWQ7              	100.00%		Q297T3              	100.00%
Bootstrap support for F7AWQ7 as seed ortholog is 100%.
Bootstrap support for Q297T3 as seed ortholog is 100%.

Group of orthologs #1914. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:274

F6Y7V1              	100.00%		Q29MR3              	100.00%
Bootstrap support for F6Y7V1 as seed ortholog is 100%.
Bootstrap support for Q29MR3 as seed ortholog is 100%.

Group of orthologs #1915. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:274

H2XSX6              	100.00%		Q296Z9              	100.00%
Bootstrap support for H2XSX6 as seed ortholog is 100%.
Bootstrap support for Q296Z9 as seed ortholog is 100%.

Group of orthologs #1916. Best score 274 bits
Score difference with first non-orthologous sequence - C.intestinalis:274 D.pseudoobscura:274

F7BD94              	100.00%		Q29M44              	100.00%
Bootstrap support for F7BD94 as seed ortholog is 100%.
Bootstrap support for Q29M44 as seed ortholog is 100%.

Group of orthologs #1917. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 D.pseudoobscura:273

F6QHP8              	100.00%		Q28Y31              	100.00%
Bootstrap support for F6QHP8 as seed ortholog is 100%.
Bootstrap support for Q28Y31 as seed ortholog is 100%.

Group of orthologs #1918. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 D.pseudoobscura:273

F6RAN6              	100.00%		Q29JM3              	100.00%
Bootstrap support for F6RAN6 as seed ortholog is 100%.
Bootstrap support for Q29JM3 as seed ortholog is 100%.

Group of orthologs #1919. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 D.pseudoobscura:273

F6TJ64              	100.00%		Q29IG6              	100.00%
Bootstrap support for F6TJ64 as seed ortholog is 100%.
Bootstrap support for Q29IG6 as seed ortholog is 100%.

Group of orthologs #1920. Best score 273 bits
Score difference with first non-orthologous sequence - C.intestinalis:273 D.pseudoobscura:273

F6Y3X0              	100.00%		Q29K22              	100.00%
Bootstrap support for F6Y3X0 as seed ortholog is 100%.
Bootstrap support for Q29K22 as seed ortholog is 100%.

Group of orthologs #1921. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 D.pseudoobscura:142

F7B1Z2              	100.00%		B5DW86              	100.00%
F6Z145              	22.98%		B5DYF4              	34.68%
Bootstrap support for F7B1Z2 as seed ortholog is 89%.
Bootstrap support for B5DW86 as seed ortholog is 94%.

Group of orthologs #1922. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 D.pseudoobscura:127

F6Y836              	100.00%		Q28WY6              	100.00%
                    	       		B5E1M6              	98.26%
Bootstrap support for F6Y836 as seed ortholog is 90%.
Bootstrap support for Q28WY6 as seed ortholog is 91%.

Group of orthologs #1923. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 D.pseudoobscura:38

F6WXC5              	100.00%		B5DIM3              	100.00%
Bootstrap support for F6WXC5 as seed ortholog is 100%.
Bootstrap support for B5DIM3 as seed ortholog is 56%.
Alternative seed ortholog is Q29EV0 (38 bits away from this cluster)

Group of orthologs #1924. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 D.pseudoobscura:272

F6T8R8              	100.00%		Q298N3              	100.00%
Bootstrap support for F6T8R8 as seed ortholog is 100%.
Bootstrap support for Q298N3 as seed ortholog is 100%.

Group of orthologs #1925. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 D.pseudoobscura:272

F6VN53              	100.00%		Q290S4              	100.00%
Bootstrap support for F6VN53 as seed ortholog is 100%.
Bootstrap support for Q290S4 as seed ortholog is 100%.

Group of orthologs #1926. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 D.pseudoobscura:206

F6TDN1              	100.00%		Q29GN3              	100.00%
Bootstrap support for F6TDN1 as seed ortholog is 100%.
Bootstrap support for Q29GN3 as seed ortholog is 99%.

Group of orthologs #1927. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 D.pseudoobscura:272

F7AFG0              	100.00%		Q28ZB0              	100.00%
Bootstrap support for F7AFG0 as seed ortholog is 100%.
Bootstrap support for Q28ZB0 as seed ortholog is 100%.

Group of orthologs #1928. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 D.pseudoobscura:272

F6Z6H7              	100.00%		Q294Y6              	100.00%
Bootstrap support for F6Z6H7 as seed ortholog is 100%.
Bootstrap support for Q294Y6 as seed ortholog is 100%.

Group of orthologs #1929. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 D.pseudoobscura:272

F7AR28              	100.00%		Q293U8              	100.00%
Bootstrap support for F7AR28 as seed ortholog is 100%.
Bootstrap support for Q293U8 as seed ortholog is 100%.

Group of orthologs #1930. Best score 272 bits
Score difference with first non-orthologous sequence - C.intestinalis:272 D.pseudoobscura:272

F7B2X5              	100.00%		Q298J1              	100.00%
Bootstrap support for F7B2X5 as seed ortholog is 100%.
Bootstrap support for Q298J1 as seed ortholog is 100%.

Group of orthologs #1931. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 D.pseudoobscura:271

H2XNY7              	100.00%		Q29F69              	100.00%
                    	       		B5DWP1              	24.43%
Bootstrap support for H2XNY7 as seed ortholog is 100%.
Bootstrap support for Q29F69 as seed ortholog is 100%.

Group of orthologs #1932. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 D.pseudoobscura:271

F6S2A1              	100.00%		B5DK53              	100.00%
Bootstrap support for F6S2A1 as seed ortholog is 100%.
Bootstrap support for B5DK53 as seed ortholog is 100%.

Group of orthologs #1933. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 D.pseudoobscura:271

F6UVC2              	100.00%		B5DNB9              	100.00%
Bootstrap support for F6UVC2 as seed ortholog is 100%.
Bootstrap support for B5DNB9 as seed ortholog is 100%.

Group of orthologs #1934. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 D.pseudoobscura:271

F6UJB5              	100.00%		B5DRH5              	100.00%
Bootstrap support for F6UJB5 as seed ortholog is 100%.
Bootstrap support for B5DRH5 as seed ortholog is 100%.

Group of orthologs #1935. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 D.pseudoobscura:271

H2XLK7              	100.00%		Q29B05              	100.00%
Bootstrap support for H2XLK7 as seed ortholog is 100%.
Bootstrap support for Q29B05 as seed ortholog is 100%.

Group of orthologs #1936. Best score 271 bits
Score difference with first non-orthologous sequence - C.intestinalis:271 D.pseudoobscura:271

H2XY62              	100.00%		Q295N7              	100.00%
Bootstrap support for H2XY62 as seed ortholog is 100%.
Bootstrap support for Q295N7 as seed ortholog is 100%.

Group of orthologs #1937. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 D.pseudoobscura:270

F7AMV0              	100.00%		Q29NE4              	100.00%
                    	       		B5DTH9              	22.02%
Bootstrap support for F7AMV0 as seed ortholog is 100%.
Bootstrap support for Q29NE4 as seed ortholog is 100%.

Group of orthologs #1938. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 D.pseudoobscura:270

F6S3G5              	100.00%		Q296H5              	100.00%
Bootstrap support for F6S3G5 as seed ortholog is 100%.
Bootstrap support for Q296H5 as seed ortholog is 100%.

Group of orthologs #1939. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 D.pseudoobscura:270

F6VII3              	100.00%		Q294R1              	100.00%
Bootstrap support for F6VII3 as seed ortholog is 100%.
Bootstrap support for Q294R1 as seed ortholog is 100%.

Group of orthologs #1940. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 D.pseudoobscura:270

F6VCD8              	100.00%		Q295V2              	100.00%
Bootstrap support for F6VCD8 as seed ortholog is 99%.
Bootstrap support for Q295V2 as seed ortholog is 100%.

Group of orthologs #1941. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 D.pseudoobscura:270

F6S3S9              	100.00%		Q29G52              	100.00%
Bootstrap support for F6S3S9 as seed ortholog is 100%.
Bootstrap support for Q29G52 as seed ortholog is 100%.

Group of orthologs #1942. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 D.pseudoobscura:270

F6XD08              	100.00%		Q295L9              	100.00%
Bootstrap support for F6XD08 as seed ortholog is 99%.
Bootstrap support for Q295L9 as seed ortholog is 100%.

Group of orthologs #1943. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:270 D.pseudoobscura:270

F6ZIP8              	100.00%		Q28YX8              	100.00%
Bootstrap support for F6ZIP8 as seed ortholog is 100%.
Bootstrap support for Q28YX8 as seed ortholog is 100%.

Group of orthologs #1944. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:209

F6ZZP5              	100.00%		Q294B8              	100.00%
Bootstrap support for F6ZZP5 as seed ortholog is 99%.
Bootstrap support for Q294B8 as seed ortholog is 100%.

Group of orthologs #1945. Best score 270 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 D.pseudoobscura:270

H2XU01              	100.00%		Q28ZT1              	100.00%
Bootstrap support for H2XU01 as seed ortholog is 99%.
Bootstrap support for Q28ZT1 as seed ortholog is 100%.

Group of orthologs #1946. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 D.pseudoobscura:269

F6TQ12              	100.00%		B5DS74              	100.00%
                    	       		Q29PG3              	88.66%
Bootstrap support for F6TQ12 as seed ortholog is 100%.
Bootstrap support for B5DS74 as seed ortholog is 100%.

Group of orthologs #1947. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 D.pseudoobscura:111

F6PUP9              	100.00%		Q292H0              	100.00%
F6Z4E6              	38.93%		
Bootstrap support for F6PUP9 as seed ortholog is 100%.
Bootstrap support for Q292H0 as seed ortholog is 98%.

Group of orthologs #1948. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 D.pseudoobscura:269

F6S3Q7              	100.00%		B5E0Y7              	100.00%
Bootstrap support for F6S3Q7 as seed ortholog is 100%.
Bootstrap support for B5E0Y7 as seed ortholog is 100%.

Group of orthologs #1949. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 D.pseudoobscura:200

F6PPH5              	100.00%		Q29EX0              	100.00%
Bootstrap support for F6PPH5 as seed ortholog is 100%.
Bootstrap support for Q29EX0 as seed ortholog is 100%.

Group of orthologs #1950. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 D.pseudoobscura:269

F6U8M8              	100.00%		Q296Z4              	100.00%
Bootstrap support for F6U8M8 as seed ortholog is 100%.
Bootstrap support for Q296Z4 as seed ortholog is 100%.

Group of orthologs #1951. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 D.pseudoobscura:52

F6WRK0              	100.00%		Q29FE6              	100.00%
Bootstrap support for F6WRK0 as seed ortholog is 100%.
Bootstrap support for Q29FE6 as seed ortholog is 96%.

Group of orthologs #1952. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 D.pseudoobscura:269

F6WKL0              	100.00%		Q29JD9              	100.00%
Bootstrap support for F6WKL0 as seed ortholog is 100%.
Bootstrap support for Q29JD9 as seed ortholog is 100%.

Group of orthologs #1953. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 D.pseudoobscura:155

F6XWG9              	100.00%		Q29I41              	100.00%
Bootstrap support for F6XWG9 as seed ortholog is 100%.
Bootstrap support for Q29I41 as seed ortholog is 100%.

Group of orthologs #1954. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 D.pseudoobscura:269

F6XTV8              	100.00%		Q29P72              	100.00%
Bootstrap support for F6XTV8 as seed ortholog is 100%.
Bootstrap support for Q29P72 as seed ortholog is 100%.

Group of orthologs #1955. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 D.pseudoobscura:16

H2XU41              	100.00%		Q29BH8              	100.00%
Bootstrap support for H2XU41 as seed ortholog is 64%.
Alternative seed ortholog is Q68A28 (8 bits away from this cluster)
Bootstrap support for Q29BH8 as seed ortholog is 77%.

Group of orthologs #1956. Best score 269 bits
Score difference with first non-orthologous sequence - C.intestinalis:269 D.pseudoobscura:269

H2Y050              	100.00%		Q297U2              	100.00%
Bootstrap support for H2Y050 as seed ortholog is 100%.
Bootstrap support for Q297U2 as seed ortholog is 100%.

Group of orthologs #1957. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 D.pseudoobscura:268

C4B8X0              	100.00%		Q295B4              	100.00%
Bootstrap support for C4B8X0 as seed ortholog is 100%.
Bootstrap support for Q295B4 as seed ortholog is 100%.

Group of orthologs #1958. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 D.pseudoobscura:185

F6T7Y6              	100.00%		Q29FJ6              	100.00%
Bootstrap support for F6T7Y6 as seed ortholog is 100%.
Bootstrap support for Q29FJ6 as seed ortholog is 100%.

Group of orthologs #1959. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 D.pseudoobscura:268

F6SM68              	100.00%		Q29HA3              	100.00%
Bootstrap support for F6SM68 as seed ortholog is 100%.
Bootstrap support for Q29HA3 as seed ortholog is 100%.

Group of orthologs #1960. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 D.pseudoobscura:268

F6PMD1              	100.00%		Q2M0U1              	100.00%
Bootstrap support for F6PMD1 as seed ortholog is 100%.
Bootstrap support for Q2M0U1 as seed ortholog is 100%.

Group of orthologs #1961. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 D.pseudoobscura:268

F6TVS6              	100.00%		Q29I14              	100.00%
Bootstrap support for F6TVS6 as seed ortholog is 100%.
Bootstrap support for Q29I14 as seed ortholog is 100%.

Group of orthologs #1962. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 D.pseudoobscura:268

F7A912              	100.00%		Q293T5              	100.00%
Bootstrap support for F7A912 as seed ortholog is 100%.
Bootstrap support for Q293T5 as seed ortholog is 100%.

Group of orthologs #1963. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 D.pseudoobscura:268

F6SS61              	100.00%		Q2M0L5              	100.00%
Bootstrap support for F6SS61 as seed ortholog is 100%.
Bootstrap support for Q2M0L5 as seed ortholog is 100%.

Group of orthologs #1964. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 D.pseudoobscura:268

F7BF26              	100.00%		Q29F01              	100.00%
Bootstrap support for F7BF26 as seed ortholog is 100%.
Bootstrap support for Q29F01 as seed ortholog is 100%.

Group of orthologs #1965. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 D.pseudoobscura:268

H2XS91              	100.00%		Q29EX9              	100.00%
Bootstrap support for H2XS91 as seed ortholog is 100%.
Bootstrap support for Q29EX9 as seed ortholog is 100%.

Group of orthologs #1966. Best score 268 bits
Score difference with first non-orthologous sequence - C.intestinalis:268 D.pseudoobscura:268

H2XLQ6              	100.00%		Q29MH1              	100.00%
Bootstrap support for H2XLQ6 as seed ortholog is 100%.
Bootstrap support for Q29MH1 as seed ortholog is 100%.

Group of orthologs #1967. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 D.pseudoobscura:267

F6YSM6              	100.00%		Q28XN8              	100.00%
                    	       		Q28XN7              	18.72%
                    	       		Q29KU9              	15.20%
                    	       		Q28XN9              	14.08%
Bootstrap support for F6YSM6 as seed ortholog is 100%.
Bootstrap support for Q28XN8 as seed ortholog is 100%.

Group of orthologs #1968. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 D.pseudoobscura:267

F6UA65              	100.00%		B5DJ23              	100.00%
Bootstrap support for F6UA65 as seed ortholog is 100%.
Bootstrap support for B5DJ23 as seed ortholog is 100%.

Group of orthologs #1969. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 D.pseudoobscura:267

F6RGI4              	100.00%		Q28ZZ6              	100.00%
Bootstrap support for F6RGI4 as seed ortholog is 100%.
Bootstrap support for Q28ZZ6 as seed ortholog is 100%.

Group of orthologs #1970. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 D.pseudoobscura:267

F7B4P3              	100.00%		B5DKE5              	100.00%
Bootstrap support for F7B4P3 as seed ortholog is 100%.
Bootstrap support for B5DKE5 as seed ortholog is 100%.

Group of orthologs #1971. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 D.pseudoobscura:267

F6WTU8              	100.00%		Q29F51              	100.00%
Bootstrap support for F6WTU8 as seed ortholog is 100%.
Bootstrap support for Q29F51 as seed ortholog is 100%.

Group of orthologs #1972. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 D.pseudoobscura:267

F7B1W3              	100.00%		Q29N40              	100.00%
Bootstrap support for F7B1W3 as seed ortholog is 100%.
Bootstrap support for Q29N40 as seed ortholog is 100%.

Group of orthologs #1973. Best score 267 bits
Score difference with first non-orthologous sequence - C.intestinalis:267 D.pseudoobscura:267

F6ZZ65              	100.00%		Q2M0T4              	100.00%
Bootstrap support for F6ZZ65 as seed ortholog is 100%.
Bootstrap support for Q2M0T4 as seed ortholog is 100%.

Group of orthologs #1974. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:93

F6TXZ0              	100.00%		B5DRW8              	100.00%
Bootstrap support for F6TXZ0 as seed ortholog is 99%.
Bootstrap support for B5DRW8 as seed ortholog is 89%.

Group of orthologs #1975. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 D.pseudoobscura:266

F6PM75              	100.00%		Q293T8              	100.00%
Bootstrap support for F6PM75 as seed ortholog is 100%.
Bootstrap support for Q293T8 as seed ortholog is 100%.

Group of orthologs #1976. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 D.pseudoobscura:266

F6PZT9              	100.00%		Q29C94              	100.00%
Bootstrap support for F6PZT9 as seed ortholog is 100%.
Bootstrap support for Q29C94 as seed ortholog is 100%.

Group of orthologs #1977. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 D.pseudoobscura:157

F6RJT7              	100.00%		Q29B99              	100.00%
Bootstrap support for F6RJT7 as seed ortholog is 99%.
Bootstrap support for Q29B99 as seed ortholog is 99%.

Group of orthologs #1978. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 D.pseudoobscura:266

F6WBE1              	100.00%		Q29I74              	100.00%
Bootstrap support for F6WBE1 as seed ortholog is 100%.
Bootstrap support for Q29I74 as seed ortholog is 100%.

Group of orthologs #1979. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 D.pseudoobscura:266

F6UCW1              	100.00%		Q2M047              	100.00%
Bootstrap support for F6UCW1 as seed ortholog is 100%.
Bootstrap support for Q2M047 as seed ortholog is 100%.

Group of orthologs #1980. Best score 266 bits
Score difference with first non-orthologous sequence - C.intestinalis:266 D.pseudoobscura:266

F6Z6J2              	100.00%		Q2LYR4              	100.00%
Bootstrap support for F6Z6J2 as seed ortholog is 100%.
Bootstrap support for Q2LYR4 as seed ortholog is 100%.

Group of orthologs #1981. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 D.pseudoobscura:265

F6RQQ8              	100.00%		I5AP95              	100.00%
Bootstrap support for F6RQQ8 as seed ortholog is 100%.
Bootstrap support for I5AP95 as seed ortholog is 100%.

Group of orthologs #1982. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 D.pseudoobscura:265

F6YDK0              	100.00%		B5DPW4              	100.00%
Bootstrap support for F6YDK0 as seed ortholog is 100%.
Bootstrap support for B5DPW4 as seed ortholog is 100%.

Group of orthologs #1983. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:265

F6WEK5              	100.00%		Q290I3              	100.00%
Bootstrap support for F6WEK5 as seed ortholog is 99%.
Bootstrap support for Q290I3 as seed ortholog is 100%.

Group of orthologs #1984. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 D.pseudoobscura:265

F6ZK14              	100.00%		Q28WM2              	100.00%
Bootstrap support for F6ZK14 as seed ortholog is 100%.
Bootstrap support for Q28WM2 as seed ortholog is 100%.

Group of orthologs #1985. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:265 D.pseudoobscura:265

F6U8F8              	100.00%		Q29EN4              	100.00%
Bootstrap support for F6U8F8 as seed ortholog is 100%.
Bootstrap support for Q29EN4 as seed ortholog is 100%.

Group of orthologs #1986. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 D.pseudoobscura:122

F7A771              	100.00%		Q292Z8              	100.00%
Bootstrap support for F7A771 as seed ortholog is 99%.
Bootstrap support for Q292Z8 as seed ortholog is 100%.

Group of orthologs #1987. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 D.pseudoobscura:136

H2XRU5              	100.00%		Q295Z5              	100.00%
Bootstrap support for H2XRU5 as seed ortholog is 100%.
Bootstrap support for Q295Z5 as seed ortholog is 100%.

Group of orthologs #1988. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 D.pseudoobscura:265

F7AN36              	100.00%		Q29IB5              	100.00%
Bootstrap support for F7AN36 as seed ortholog is 99%.
Bootstrap support for Q29IB5 as seed ortholog is 100%.

Group of orthologs #1989. Best score 265 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 D.pseudoobscura:265

H2XK16              	100.00%		Q29L01              	100.00%
Bootstrap support for H2XK16 as seed ortholog is 62%.
Alternative seed ortholog is F7AHT0 (2 bits away from this cluster)
Bootstrap support for Q29L01 as seed ortholog is 100%.

Group of orthologs #1990. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 D.pseudoobscura:75

F6S855              	100.00%		Q290Q4              	100.00%
F6S880              	100.00%		Q28YK4              	100.00%
F6XUY3              	54.67%		Q28YK5              	38.89%
F6W3Q9              	26.63%		Q29II8              	14.39%
Bootstrap support for F6S855 as seed ortholog is 99%.
Bootstrap support for F6S880 as seed ortholog is 99%.
Bootstrap support for Q290Q4 as seed ortholog is 99%.
Bootstrap support for Q28YK4 as seed ortholog is 98%.

Group of orthologs #1991. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 D.pseudoobscura:97

Q967X2              	100.00%		Q28ZA4              	100.00%
                    	       		B5DMB8              	41.11%
Bootstrap support for Q967X2 as seed ortholog is 100%.
Bootstrap support for Q28ZA4 as seed ortholog is 99%.

Group of orthologs #1992. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 D.pseudoobscura:264

F6TB52              	100.00%		Q29IM3              	100.00%
Bootstrap support for F6TB52 as seed ortholog is 100%.
Bootstrap support for Q29IM3 as seed ortholog is 100%.

Group of orthologs #1993. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 D.pseudoobscura:78

F6VY76              	100.00%		Q29GV7              	100.00%
Bootstrap support for F6VY76 as seed ortholog is 99%.
Bootstrap support for Q29GV7 as seed ortholog is 99%.

Group of orthologs #1994. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:8 D.pseudoobscura:19

F6VNH8              	100.00%		Q29MQ9              	100.00%
Bootstrap support for F6VNH8 as seed ortholog is 68%.
Alternative seed ortholog is Q4H2V9 (8 bits away from this cluster)
Bootstrap support for Q29MQ9 as seed ortholog is 53%.
Alternative seed ortholog is Q294I3 (19 bits away from this cluster)

Group of orthologs #1995. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 D.pseudoobscura:264

F6WWY7              	100.00%		Q29KT5              	100.00%
Bootstrap support for F6WWY7 as seed ortholog is 100%.
Bootstrap support for Q29KT5 as seed ortholog is 100%.

Group of orthologs #1996. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 D.pseudoobscura:187

F7A5W3              	100.00%		Q29HR6              	100.00%
Bootstrap support for F7A5W3 as seed ortholog is 99%.
Bootstrap support for Q29HR6 as seed ortholog is 100%.

Group of orthologs #1997. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 D.pseudoobscura:264

H2XQJ7              	100.00%		Q29DL1              	100.00%
Bootstrap support for H2XQJ7 as seed ortholog is 100%.
Bootstrap support for Q29DL1 as seed ortholog is 100%.

Group of orthologs #1998. Best score 264 bits
Score difference with first non-orthologous sequence - C.intestinalis:264 D.pseudoobscura:264

H2XWW0              	100.00%		Q29GA9              	100.00%
Bootstrap support for H2XWW0 as seed ortholog is 100%.
Bootstrap support for Q29GA9 as seed ortholog is 100%.

Group of orthologs #1999. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 D.pseudoobscura:263

F6YMT8              	100.00%		Q29CJ7              	100.00%
                    	       		B5DH86              	99.15%
Bootstrap support for F6YMT8 as seed ortholog is 100%.
Bootstrap support for Q29CJ7 as seed ortholog is 100%.

Group of orthologs #2000. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 D.pseudoobscura:263

F6V7W7              	100.00%		B5DYC5              	100.00%
Bootstrap support for F6V7W7 as seed ortholog is 100%.
Bootstrap support for B5DYC5 as seed ortholog is 100%.

Group of orthologs #2001. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 D.pseudoobscura:78

F6TFY3              	100.00%		Q28XM2              	100.00%
Bootstrap support for F6TFY3 as seed ortholog is 99%.
Bootstrap support for Q28XM2 as seed ortholog is 99%.

Group of orthologs #2002. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 D.pseudoobscura:263

F6PHR7              	100.00%		Q29JX5              	100.00%
Bootstrap support for F6PHR7 as seed ortholog is 100%.
Bootstrap support for Q29JX5 as seed ortholog is 100%.

Group of orthologs #2003. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 D.pseudoobscura:263

F6PK54              	100.00%		Q29K52              	100.00%
Bootstrap support for F6PK54 as seed ortholog is 100%.
Bootstrap support for Q29K52 as seed ortholog is 100%.

Group of orthologs #2004. Best score 263 bits
Score difference with first non-orthologous sequence - C.intestinalis:263 D.pseudoobscura:263

Q8I7E3              	100.00%		Q29PP8              	100.00%
Bootstrap support for Q8I7E3 as seed ortholog is 100%.
Bootstrap support for Q29PP8 as seed ortholog is 100%.

Group of orthologs #2005. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 D.pseudoobscura:16

F6T9R1              	100.00%		B5DKT4              	100.00%
                    	       		B5DKT3              	85.71%
                    	       		B5DRY2              	54.29%
Bootstrap support for F6T9R1 as seed ortholog is 100%.
Bootstrap support for B5DKT4 as seed ortholog is 88%.

Group of orthologs #2006. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 D.pseudoobscura:262

F6W248              	100.00%		Q292F0              	100.00%
Bootstrap support for F6W248 as seed ortholog is 100%.
Bootstrap support for Q292F0 as seed ortholog is 100%.

Group of orthologs #2007. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:262

F6SU61              	100.00%		Q29GV9              	100.00%
Bootstrap support for F6SU61 as seed ortholog is 100%.
Bootstrap support for Q29GV9 as seed ortholog is 100%.

Group of orthologs #2008. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 D.pseudoobscura:262

F6TIA8              	100.00%		Q29LT4              	100.00%
Bootstrap support for F6TIA8 as seed ortholog is 100%.
Bootstrap support for Q29LT4 as seed ortholog is 100%.

Group of orthologs #2009. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 D.pseudoobscura:262

F6Y677              	100.00%		Q29N44              	100.00%
Bootstrap support for F6Y677 as seed ortholog is 100%.
Bootstrap support for Q29N44 as seed ortholog is 100%.

Group of orthologs #2010. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:149

H2XJL6              	100.00%		Q29FC4              	100.00%
Bootstrap support for H2XJL6 as seed ortholog is 100%.
Bootstrap support for Q29FC4 as seed ortholog is 100%.

Group of orthologs #2011. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 D.pseudoobscura:262

H2XUT2              	100.00%		Q29C08              	100.00%
Bootstrap support for H2XUT2 as seed ortholog is 100%.
Bootstrap support for Q29C08 as seed ortholog is 100%.

Group of orthologs #2012. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 D.pseudoobscura:262

Q4H356              	100.00%		Q294I0              	100.00%
Bootstrap support for Q4H356 as seed ortholog is 73%.
Alternative seed ortholog is Q4H355 (30 bits away from this cluster)
Bootstrap support for Q294I0 as seed ortholog is 100%.

Group of orthologs #2013. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 D.pseudoobscura:154

H2XZJ2              	100.00%		Q29GG1              	100.00%
Bootstrap support for H2XZJ2 as seed ortholog is 99%.
Bootstrap support for Q29GG1 as seed ortholog is 100%.

Group of orthologs #2014. Best score 262 bits
Score difference with first non-orthologous sequence - C.intestinalis:262 D.pseudoobscura:262

H2Y240              	100.00%		Q29L30              	100.00%
Bootstrap support for H2Y240 as seed ortholog is 100%.
Bootstrap support for Q29L30 as seed ortholog is 100%.

Group of orthologs #2015. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 D.pseudoobscura:261

F6VZA9              	100.00%		Q29HZ1              	100.00%
F6SJY8              	27.38%		B5DI33              	53.21%
                    	       		B5DYK2              	51.73%
                    	       		B5DIB2              	49.42%
                    	       		B5DMC2              	46.62%
Bootstrap support for F6VZA9 as seed ortholog is 100%.
Bootstrap support for Q29HZ1 as seed ortholog is 100%.

Group of orthologs #2016. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 D.pseudoobscura:261

F6YNP9              	100.00%		Q29DM3              	100.00%
F6XF34              	14.99%		
Bootstrap support for F6YNP9 as seed ortholog is 100%.
Bootstrap support for Q29DM3 as seed ortholog is 100%.

Group of orthologs #2017. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 D.pseudoobscura:261

F6ZN43              	100.00%		Q29HE3              	100.00%
Bootstrap support for F6ZN43 as seed ortholog is 100%.
Bootstrap support for Q29HE3 as seed ortholog is 100%.

Group of orthologs #2018. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 D.pseudoobscura:147

H2XVE0              	100.00%		Q29GX3              	100.00%
Bootstrap support for H2XVE0 as seed ortholog is 100%.
Bootstrap support for Q29GX3 as seed ortholog is 100%.

Group of orthologs #2019. Best score 261 bits
Score difference with first non-orthologous sequence - C.intestinalis:261 D.pseudoobscura:261

H2XXX4              	100.00%		Q29LR5              	100.00%
Bootstrap support for H2XXX4 as seed ortholog is 100%.
Bootstrap support for Q29LR5 as seed ortholog is 100%.

Group of orthologs #2020. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 D.pseudoobscura:260

F6S909              	100.00%		Q29GF6              	100.00%
F6S925              	23.63%		
Q4H398              	8.53%		
Bootstrap support for F6S909 as seed ortholog is 100%.
Bootstrap support for Q29GF6 as seed ortholog is 100%.

Group of orthologs #2021. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 D.pseudoobscura:260

H2XU57              	100.00%		Q29N88              	100.00%
Q8I7D6              	95.12%		
Bootstrap support for H2XU57 as seed ortholog is 100%.
Bootstrap support for Q29N88 as seed ortholog is 100%.

Group of orthologs #2022. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 D.pseudoobscura:110

F6UAF0              	100.00%		B5DNL9              	100.00%
Bootstrap support for F6UAF0 as seed ortholog is 77%.
Bootstrap support for B5DNL9 as seed ortholog is 100%.

Group of orthologs #2023. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 D.pseudoobscura:260

F6UE24              	100.00%		Q28X16              	100.00%
Bootstrap support for F6UE24 as seed ortholog is 100%.
Bootstrap support for Q28X16 as seed ortholog is 100%.

Group of orthologs #2024. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:191

F6RGX1              	100.00%		Q29A89              	100.00%
Bootstrap support for F6RGX1 as seed ortholog is 100%.
Bootstrap support for Q29A89 as seed ortholog is 100%.

Group of orthologs #2025. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 D.pseudoobscura:260

F6PQL4              	100.00%		Q29EW7              	100.00%
Bootstrap support for F6PQL4 as seed ortholog is 100%.
Bootstrap support for Q29EW7 as seed ortholog is 100%.

Group of orthologs #2026. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 D.pseudoobscura:260

F6U095              	100.00%		Q294K8              	100.00%
Bootstrap support for F6U095 as seed ortholog is 100%.
Bootstrap support for Q294K8 as seed ortholog is 100%.

Group of orthologs #2027. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:260

F6R4Z1              	100.00%		Q29CW7              	100.00%
Bootstrap support for F6R4Z1 as seed ortholog is 97%.
Bootstrap support for Q29CW7 as seed ortholog is 100%.

Group of orthologs #2028. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 D.pseudoobscura:260

F6YB67              	100.00%		Q291L7              	100.00%
Bootstrap support for F6YB67 as seed ortholog is 100%.
Bootstrap support for Q291L7 as seed ortholog is 100%.

Group of orthologs #2029. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 D.pseudoobscura:260

H2Y079              	100.00%		B5DKS4              	100.00%
Bootstrap support for H2Y079 as seed ortholog is 100%.
Bootstrap support for B5DKS4 as seed ortholog is 100%.

Group of orthologs #2030. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 D.pseudoobscura:260

F6X4T0              	100.00%		Q29C26              	100.00%
Bootstrap support for F6X4T0 as seed ortholog is 100%.
Bootstrap support for Q29C26 as seed ortholog is 100%.

Group of orthologs #2031. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 D.pseudoobscura:260

F6VKZ4              	100.00%		Q29GR6              	100.00%
Bootstrap support for F6VKZ4 as seed ortholog is 100%.
Bootstrap support for Q29GR6 as seed ortholog is 100%.

Group of orthologs #2032. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:260 D.pseudoobscura:260

F6VEG5              	100.00%		Q2M0B9              	100.00%
Bootstrap support for F6VEG5 as seed ortholog is 100%.
Bootstrap support for Q2M0B9 as seed ortholog is 100%.

Group of orthologs #2033. Best score 260 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:56

H2XLJ3              	100.00%		Q29D91              	100.00%
Bootstrap support for H2XLJ3 as seed ortholog is 99%.
Bootstrap support for Q29D91 as seed ortholog is 99%.

Group of orthologs #2034. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 D.pseudoobscura:259

F6S0N6              	100.00%		B5DQY7              	100.00%
Bootstrap support for F6S0N6 as seed ortholog is 100%.
Bootstrap support for B5DQY7 as seed ortholog is 100%.

Group of orthologs #2035. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 D.pseudoobscura:259

F6S0S0              	100.00%		Q29J97              	100.00%
Bootstrap support for F6S0S0 as seed ortholog is 100%.
Bootstrap support for Q29J97 as seed ortholog is 100%.

Group of orthologs #2036. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 D.pseudoobscura:259

F6WWH2              	100.00%		Q296Z3              	100.00%
Bootstrap support for F6WWH2 as seed ortholog is 100%.
Bootstrap support for Q296Z3 as seed ortholog is 100%.

Group of orthologs #2037. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 D.pseudoobscura:259

F6U8U5              	100.00%		Q2M0M2              	100.00%
Bootstrap support for F6U8U5 as seed ortholog is 100%.
Bootstrap support for Q2M0M2 as seed ortholog is 100%.

Group of orthologs #2038. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 D.pseudoobscura:259

F6VKC0              	100.00%		Q29PI2              	100.00%
Bootstrap support for F6VKC0 as seed ortholog is 100%.
Bootstrap support for Q29PI2 as seed ortholog is 100%.

Group of orthologs #2039. Best score 259 bits
Score difference with first non-orthologous sequence - C.intestinalis:259 D.pseudoobscura:259

H2XK01              	100.00%		Q29FQ7              	100.00%
Bootstrap support for H2XK01 as seed ortholog is 100%.
Bootstrap support for Q29FQ7 as seed ortholog is 100%.

Group of orthologs #2040. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 D.pseudoobscura:258

F6SGU7              	100.00%		Q298L0              	100.00%
Bootstrap support for F6SGU7 as seed ortholog is 100%.
Bootstrap support for Q298L0 as seed ortholog is 100%.

Group of orthologs #2041. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 D.pseudoobscura:258

F6W2L5              	100.00%		Q29AP4              	100.00%
Bootstrap support for F6W2L5 as seed ortholog is 100%.
Bootstrap support for Q29AP4 as seed ortholog is 100%.

Group of orthologs #2042. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 D.pseudoobscura:258

F7A328              	100.00%		Q28YU6              	100.00%
Bootstrap support for F7A328 as seed ortholog is 100%.
Bootstrap support for Q28YU6 as seed ortholog is 100%.

Group of orthologs #2043. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 D.pseudoobscura:258

F6SA38              	100.00%		Q2LZU4              	100.00%
Bootstrap support for F6SA38 as seed ortholog is 100%.
Bootstrap support for Q2LZU4 as seed ortholog is 100%.

Group of orthologs #2044. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 D.pseudoobscura:258

H2XPL3              	100.00%		Q29E19              	100.00%
Bootstrap support for H2XPL3 as seed ortholog is 100%.
Bootstrap support for Q29E19 as seed ortholog is 100%.

Group of orthologs #2045. Best score 258 bits
Score difference with first non-orthologous sequence - C.intestinalis:258 D.pseudoobscura:258

F7BDS7              	100.00%		Q2M016              	100.00%
Bootstrap support for F7BDS7 as seed ortholog is 100%.
Bootstrap support for Q2M016 as seed ortholog is 100%.

Group of orthologs #2046. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 D.pseudoobscura:126

F6WUF6              	100.00%		B5DVU6              	100.00%
                    	       		B5DLY5              	57.38%
                    	       		B5DVE4              	24.04%
Bootstrap support for F6WUF6 as seed ortholog is 100%.
Bootstrap support for B5DVU6 as seed ortholog is 100%.

Group of orthologs #2047. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 D.pseudoobscura:257

F6V2A4              	100.00%		B5DV76              	100.00%
                    	       		Q29P94              	100.00%
Bootstrap support for F6V2A4 as seed ortholog is 100%.
Bootstrap support for B5DV76 as seed ortholog is 100%.
Bootstrap support for Q29P94 as seed ortholog is 100%.

Group of orthologs #2048. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 D.pseudoobscura:257

F6ZYR4              	100.00%		B5DHX6              	100.00%
Bootstrap support for F6ZYR4 as seed ortholog is 100%.
Bootstrap support for B5DHX6 as seed ortholog is 100%.

Group of orthologs #2049. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:135

F6S569              	100.00%		Q296G6              	100.00%
Bootstrap support for F6S569 as seed ortholog is 100%.
Bootstrap support for Q296G6 as seed ortholog is 100%.

Group of orthologs #2050. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 D.pseudoobscura:257

H2XSA8              	100.00%		B5DHR9              	100.00%
Bootstrap support for H2XSA8 as seed ortholog is 100%.
Bootstrap support for B5DHR9 as seed ortholog is 100%.

Group of orthologs #2051. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 D.pseudoobscura:257

F6VKX1              	100.00%		Q297B7              	100.00%
Bootstrap support for F6VKX1 as seed ortholog is 100%.
Bootstrap support for Q297B7 as seed ortholog is 100%.

Group of orthologs #2052. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 D.pseudoobscura:257

F6TGU6              	100.00%		Q29DV4              	100.00%
Bootstrap support for F6TGU6 as seed ortholog is 100%.
Bootstrap support for Q29DV4 as seed ortholog is 100%.

Group of orthologs #2053. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 D.pseudoobscura:131

F6XXY5              	100.00%		Q299I2              	100.00%
Bootstrap support for F6XXY5 as seed ortholog is 100%.
Bootstrap support for Q299I2 as seed ortholog is 100%.

Group of orthologs #2054. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 D.pseudoobscura:257

F6VD75              	100.00%		Q29FN3              	100.00%
Bootstrap support for F6VD75 as seed ortholog is 100%.
Bootstrap support for Q29FN3 as seed ortholog is 100%.

Group of orthologs #2055. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 D.pseudoobscura:257

F7B0X0              	100.00%		Q291V1              	100.00%
Bootstrap support for F7B0X0 as seed ortholog is 100%.
Bootstrap support for Q291V1 as seed ortholog is 100%.

Group of orthologs #2056. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 D.pseudoobscura:257

F6ZT62              	100.00%		Q29GE4              	100.00%
Bootstrap support for F6ZT62 as seed ortholog is 100%.
Bootstrap support for Q29GE4 as seed ortholog is 100%.

Group of orthologs #2057. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 D.pseudoobscura:257

F7BBQ0              	100.00%		Q29CJ4              	100.00%
Bootstrap support for F7BBQ0 as seed ortholog is 100%.
Bootstrap support for Q29CJ4 as seed ortholog is 100%.

Group of orthologs #2058. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 D.pseudoobscura:61

F6Y011              	100.00%		Q29MK9              	100.00%
Bootstrap support for F6Y011 as seed ortholog is 100%.
Bootstrap support for Q29MK9 as seed ortholog is 94%.

Group of orthologs #2059. Best score 257 bits
Score difference with first non-orthologous sequence - C.intestinalis:257 D.pseudoobscura:257

F6ZG25              	100.00%		Q29NJ4              	100.00%
Bootstrap support for F6ZG25 as seed ortholog is 100%.
Bootstrap support for Q29NJ4 as seed ortholog is 100%.

Group of orthologs #2060. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 D.pseudoobscura:256

F6PIG9              	100.00%		Q290X2              	100.00%
Bootstrap support for F6PIG9 as seed ortholog is 100%.
Bootstrap support for Q290X2 as seed ortholog is 100%.

Group of orthologs #2061. Best score 256 bits
Score difference with first non-orthologous sequence - C.intestinalis:256 D.pseudoobscura:256

F6Q5U4              	100.00%		Q29MA6              	100.00%
Bootstrap support for F6Q5U4 as seed ortholog is 100%.
Bootstrap support for Q29MA6 as seed ortholog is 100%.

Group of orthologs #2062. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 D.pseudoobscura:255

F6Q3L6              	100.00%		Q298I9              	100.00%
Bootstrap support for F6Q3L6 as seed ortholog is 100%.
Bootstrap support for Q298I9 as seed ortholog is 100%.

Group of orthologs #2063. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 D.pseudoobscura:59

F6TEQ0              	100.00%		Q29GN2              	100.00%
Bootstrap support for F6TEQ0 as seed ortholog is 99%.
Bootstrap support for Q29GN2 as seed ortholog is 99%.

Group of orthologs #2064. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 D.pseudoobscura:133

F6Q1G7              	100.00%		Q29P53              	100.00%
Bootstrap support for F6Q1G7 as seed ortholog is 100%.
Bootstrap support for Q29P53 as seed ortholog is 100%.

Group of orthologs #2065. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 D.pseudoobscura:255

F6R763              	100.00%		Q29M41              	100.00%
Bootstrap support for F6R763 as seed ortholog is 100%.
Bootstrap support for Q29M41 as seed ortholog is 100%.

Group of orthologs #2066. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 D.pseudoobscura:255

F6WPS3              	100.00%		Q299W6              	100.00%
Bootstrap support for F6WPS3 as seed ortholog is 100%.
Bootstrap support for Q299W6 as seed ortholog is 100%.

Group of orthologs #2067. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 D.pseudoobscura:255

F6ZYG1              	100.00%		Q290S7              	100.00%
Bootstrap support for F6ZYG1 as seed ortholog is 100%.
Bootstrap support for Q290S7 as seed ortholog is 100%.

Group of orthologs #2068. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 D.pseudoobscura:255

F6TBB0              	100.00%		Q29K76              	100.00%
Bootstrap support for F6TBB0 as seed ortholog is 100%.
Bootstrap support for Q29K76 as seed ortholog is 100%.

Group of orthologs #2069. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 D.pseudoobscura:255

F6Y9R7              	100.00%		Q29FG7              	100.00%
Bootstrap support for F6Y9R7 as seed ortholog is 100%.
Bootstrap support for Q29FG7 as seed ortholog is 100%.

Group of orthologs #2070. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 D.pseudoobscura:255

H2XMQ8              	100.00%		Q290P1              	100.00%
Bootstrap support for H2XMQ8 as seed ortholog is 100%.
Bootstrap support for Q290P1 as seed ortholog is 100%.

Group of orthologs #2071. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 D.pseudoobscura:95

F6YI64              	100.00%		Q29KI2              	100.00%
Bootstrap support for F6YI64 as seed ortholog is 100%.
Bootstrap support for Q29KI2 as seed ortholog is 99%.

Group of orthologs #2072. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 D.pseudoobscura:255

F7BEE9              	100.00%		Q29D48              	100.00%
Bootstrap support for F7BEE9 as seed ortholog is 100%.
Bootstrap support for Q29D48 as seed ortholog is 100%.

Group of orthologs #2073. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 D.pseudoobscura:255

F6ZL64              	100.00%		Q29LS8              	100.00%
Bootstrap support for F6ZL64 as seed ortholog is 100%.
Bootstrap support for Q29LS8 as seed ortholog is 100%.

Group of orthologs #2074. Best score 255 bits
Score difference with first non-orthologous sequence - C.intestinalis:255 D.pseudoobscura:255

H2XQ81              	100.00%		Q29ND5              	100.00%
Bootstrap support for H2XQ81 as seed ortholog is 100%.
Bootstrap support for Q29ND5 as seed ortholog is 100%.

Group of orthologs #2075. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 D.pseudoobscura:254

F6RCC2              	100.00%		B5DHB2              	100.00%
I6L237              	96.50%		
Bootstrap support for F6RCC2 as seed ortholog is 100%.
Bootstrap support for B5DHB2 as seed ortholog is 100%.

Group of orthologs #2076. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 D.pseudoobscura:173

F6PLY6              	100.00%		Q28X67              	100.00%
Bootstrap support for F6PLY6 as seed ortholog is 100%.
Bootstrap support for Q28X67 as seed ortholog is 100%.

Group of orthologs #2077. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 D.pseudoobscura:254

C4B8W8              	100.00%		Q298T5              	100.00%
Bootstrap support for C4B8W8 as seed ortholog is 100%.
Bootstrap support for Q298T5 as seed ortholog is 100%.

Group of orthologs #2078. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 D.pseudoobscura:254

F6YYW3              	100.00%		Q290A1              	100.00%
Bootstrap support for F6YYW3 as seed ortholog is 100%.
Bootstrap support for Q290A1 as seed ortholog is 100%.

Group of orthologs #2079. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 D.pseudoobscura:254

H2XJN9              	100.00%		B5DZJ6              	100.00%
Bootstrap support for H2XJN9 as seed ortholog is 100%.
Bootstrap support for B5DZJ6 as seed ortholog is 100%.

Group of orthologs #2080. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 D.pseudoobscura:254

F7B5B2              	100.00%		Q299H1              	100.00%
Bootstrap support for F7B5B2 as seed ortholog is 100%.
Bootstrap support for Q299H1 as seed ortholog is 100%.

Group of orthologs #2081. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 D.pseudoobscura:117

F6WZS8              	100.00%		Q29M64              	100.00%
Bootstrap support for F6WZS8 as seed ortholog is 100%.
Bootstrap support for Q29M64 as seed ortholog is 99%.

Group of orthologs #2082. Best score 254 bits
Score difference with first non-orthologous sequence - C.intestinalis:254 D.pseudoobscura:254

H2XQ36              	100.00%		Q29C60              	100.00%
Bootstrap support for H2XQ36 as seed ortholog is 100%.
Bootstrap support for Q29C60 as seed ortholog is 100%.

Group of orthologs #2083. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 D.pseudoobscura:78

F6S1J5              	100.00%		Q297P4              	100.00%
                    	       		Q295G9              	31.68%
Bootstrap support for F6S1J5 as seed ortholog is 82%.
Bootstrap support for Q297P4 as seed ortholog is 99%.

Group of orthologs #2084. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 D.pseudoobscura:32

H2XQS5              	100.00%		Q29KG0              	100.00%
F7ADF2              	42.36%		
Bootstrap support for H2XQS5 as seed ortholog is 100%.
Bootstrap support for Q29KG0 as seed ortholog is 88%.

Group of orthologs #2085. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 D.pseudoobscura:253

F6UMT8              	100.00%		B5DS14              	100.00%
Bootstrap support for F6UMT8 as seed ortholog is 100%.
Bootstrap support for B5DS14 as seed ortholog is 100%.

Group of orthologs #2086. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 D.pseudoobscura:253

F6QVW6              	100.00%		I5APW6              	100.00%
Bootstrap support for F6QVW6 as seed ortholog is 100%.
Bootstrap support for I5APW6 as seed ortholog is 100%.

Group of orthologs #2087. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 D.pseudoobscura:253

H2XLX4              	100.00%		B5DKJ8              	100.00%
Bootstrap support for H2XLX4 as seed ortholog is 100%.
Bootstrap support for B5DKJ8 as seed ortholog is 100%.

Group of orthologs #2088. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 D.pseudoobscura:253

F6QAK1              	100.00%		Q29L31              	100.00%
Bootstrap support for F6QAK1 as seed ortholog is 100%.
Bootstrap support for Q29L31 as seed ortholog is 100%.

Group of orthologs #2089. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 D.pseudoobscura:253

F6Z3Y4              	100.00%		Q290F2              	100.00%
Bootstrap support for F6Z3Y4 as seed ortholog is 100%.
Bootstrap support for Q290F2 as seed ortholog is 100%.

Group of orthologs #2090. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 D.pseudoobscura:253

F7B4P8              	100.00%		B5E1M2              	100.00%
Bootstrap support for F7B4P8 as seed ortholog is 100%.
Bootstrap support for B5E1M2 as seed ortholog is 100%.

Group of orthologs #2091. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 D.pseudoobscura:198

F6VPX3              	100.00%		Q29GK9              	100.00%
Bootstrap support for F6VPX3 as seed ortholog is 100%.
Bootstrap support for Q29GK9 as seed ortholog is 100%.

Group of orthologs #2092. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:253 D.pseudoobscura:253

F7AG43              	100.00%		Q295N3              	100.00%
Bootstrap support for F7AG43 as seed ortholog is 100%.
Bootstrap support for Q295N3 as seed ortholog is 100%.

Group of orthologs #2093. Best score 253 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 D.pseudoobscura:253

F6X6Z3              	100.00%		Q2LZS0              	100.00%
Bootstrap support for F6X6Z3 as seed ortholog is 100%.
Bootstrap support for Q2LZS0 as seed ortholog is 100%.

Group of orthologs #2094. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 D.pseudoobscura:32

H2XR44              	100.00%		Q29KR9              	100.00%
                    	       		Q29KR3              	28.29%
                    	       		B5DUD8              	17.58%
                    	       		Q29KR5              	14.83%
                    	       		Q29KR8              	12.23%
                    	       		Q29A22              	9.79%
                    	       		B5DJN7              	9.48%
                    	       		Q290Z8              	7.49%
Bootstrap support for H2XR44 as seed ortholog is 85%.
Bootstrap support for Q29KR9 as seed ortholog is 79%.

Group of orthologs #2095. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:165

F6WCV2              	100.00%		Q29JJ3              	100.00%
                    	       		Q29MH7              	14.19%
Bootstrap support for F6WCV2 as seed ortholog is 99%.
Bootstrap support for Q29JJ3 as seed ortholog is 100%.

Group of orthologs #2096. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 D.pseudoobscura:252

F6QAQ0              	100.00%		Q296A1              	100.00%
Bootstrap support for F6QAQ0 as seed ortholog is 100%.
Bootstrap support for Q296A1 as seed ortholog is 100%.

Group of orthologs #2097. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 D.pseudoobscura:252

F6SXN2              	100.00%		Q299Z6              	100.00%
Bootstrap support for F6SXN2 as seed ortholog is 100%.
Bootstrap support for Q299Z6 as seed ortholog is 100%.

Group of orthologs #2098. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 D.pseudoobscura:252

F6T0L9              	100.00%		Q299S6              	100.00%
Bootstrap support for F6T0L9 as seed ortholog is 100%.
Bootstrap support for Q299S6 as seed ortholog is 100%.

Group of orthologs #2099. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 D.pseudoobscura:252

F6QM85              	100.00%		Q29GN0              	100.00%
Bootstrap support for F6QM85 as seed ortholog is 100%.
Bootstrap support for Q29GN0 as seed ortholog is 100%.

Group of orthologs #2100. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 D.pseudoobscura:252

F6V5I4              	100.00%		Q29FL0              	100.00%
Bootstrap support for F6V5I4 as seed ortholog is 100%.
Bootstrap support for Q29FL0 as seed ortholog is 100%.

Group of orthologs #2101. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:143

F6SJF0              	100.00%		Q29PI6              	100.00%
Bootstrap support for F6SJF0 as seed ortholog is 99%.
Bootstrap support for Q29PI6 as seed ortholog is 99%.

Group of orthologs #2102. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 D.pseudoobscura:252

F7BHW5              	100.00%		Q29EG4              	100.00%
Bootstrap support for F7BHW5 as seed ortholog is 100%.
Bootstrap support for Q29EG4 as seed ortholog is 100%.

Group of orthologs #2103. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 D.pseudoobscura:62

H2XXL3              	100.00%		Q28YG6              	100.00%
Bootstrap support for H2XXL3 as seed ortholog is 100%.
Bootstrap support for Q28YG6 as seed ortholog is 99%.

Group of orthologs #2104. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 D.pseudoobscura:139

Q1RLC3              	100.00%		Q29E32              	100.00%
Bootstrap support for Q1RLC3 as seed ortholog is 100%.
Bootstrap support for Q29E32 as seed ortholog is 99%.

Group of orthologs #2105. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 D.pseudoobscura:252

H2XYW2              	100.00%		Q29KG3              	100.00%
Bootstrap support for H2XYW2 as seed ortholog is 100%.
Bootstrap support for Q29KG3 as seed ortholog is 100%.

Group of orthologs #2106. Best score 252 bits
Score difference with first non-orthologous sequence - C.intestinalis:252 D.pseudoobscura:252

H2Y2A0              	100.00%		Q29JT8              	100.00%
Bootstrap support for H2Y2A0 as seed ortholog is 100%.
Bootstrap support for Q29JT8 as seed ortholog is 100%.

Group of orthologs #2107. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:26 D.pseudoobscura:251

F7AQ12              	100.00%		Q2LZK5              	100.00%
                    	       		B5DPU4              	17.68%
                    	       		Q2LZA4              	8.35%
Bootstrap support for F7AQ12 as seed ortholog is 55%.
Alternative seed ortholog is F7A786 (26 bits away from this cluster)
Bootstrap support for Q2LZK5 as seed ortholog is 100%.

Group of orthologs #2108. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 D.pseudoobscura:251

F6UGM6              	100.00%		Q2M0G4              	100.00%
                    	       		B5DU09              	6.35%
Bootstrap support for F6UGM6 as seed ortholog is 100%.
Bootstrap support for Q2M0G4 as seed ortholog is 100%.

Group of orthologs #2109. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 D.pseudoobscura:51

F7A955              	100.00%		Q28X68              	100.00%
Bootstrap support for F7A955 as seed ortholog is 100%.
Bootstrap support for Q28X68 as seed ortholog is 98%.

Group of orthologs #2110. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 D.pseudoobscura:251

F6YWI2              	100.00%		Q29AF4              	100.00%
Bootstrap support for F6YWI2 as seed ortholog is 100%.
Bootstrap support for Q29AF4 as seed ortholog is 100%.

Group of orthologs #2111. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 D.pseudoobscura:251

F6XIZ4              	100.00%		Q29KQ7              	100.00%
Bootstrap support for F6XIZ4 as seed ortholog is 100%.
Bootstrap support for Q29KQ7 as seed ortholog is 100%.

Group of orthologs #2112. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 D.pseudoobscura:251

F7A2C9              	100.00%		Q29FM9              	100.00%
Bootstrap support for F7A2C9 as seed ortholog is 100%.
Bootstrap support for Q29FM9 as seed ortholog is 100%.

Group of orthologs #2113. Best score 251 bits
Score difference with first non-orthologous sequence - C.intestinalis:251 D.pseudoobscura:31

H2XUU8              	100.00%		Q29N34              	100.00%
Bootstrap support for H2XUU8 as seed ortholog is 100%.
Bootstrap support for Q29N34 as seed ortholog is 75%.

Group of orthologs #2114. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:38 D.pseudoobscura:57

F6X7Y3              	100.00%		Q28X57              	100.00%
H2XTR1              	9.87%		
Bootstrap support for F6X7Y3 as seed ortholog is 87%.
Bootstrap support for Q28X57 as seed ortholog is 95%.

Group of orthologs #2115. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 D.pseudoobscura:250

F7B1Y1              	100.00%		Q28XH3              	100.00%
Q8I7D5              	83.72%		
Bootstrap support for F7B1Y1 as seed ortholog is 100%.
Bootstrap support for Q28XH3 as seed ortholog is 100%.

Group of orthologs #2116. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 D.pseudoobscura:250

F6WSZ7              	100.00%		Q29FU7              	100.00%
                    	       		Q296H3              	36.71%
Bootstrap support for F6WSZ7 as seed ortholog is 100%.
Bootstrap support for Q29FU7 as seed ortholog is 100%.

Group of orthologs #2117. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 D.pseudoobscura:176

F6QST8              	100.00%		Q295X6              	100.00%
Bootstrap support for F6QST8 as seed ortholog is 100%.
Bootstrap support for Q295X6 as seed ortholog is 100%.

Group of orthologs #2118. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 D.pseudoobscura:250

F6XBS5              	100.00%		Q29AA9              	100.00%
Bootstrap support for F6XBS5 as seed ortholog is 68%.
Alternative seed ortholog is H2XUY9 (23 bits away from this cluster)
Bootstrap support for Q29AA9 as seed ortholog is 100%.

Group of orthologs #2119. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 D.pseudoobscura:168

F6Z241              	100.00%		Q295M1              	100.00%
Bootstrap support for F6Z241 as seed ortholog is 100%.
Bootstrap support for Q295M1 as seed ortholog is 99%.

Group of orthologs #2120. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:125

F6YU98              	100.00%		Q297M1              	100.00%
Bootstrap support for F6YU98 as seed ortholog is 99%.
Bootstrap support for Q297M1 as seed ortholog is 99%.

Group of orthologs #2121. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 D.pseudoobscura:250

F6ZN66              	100.00%		Q29CL6              	100.00%
Bootstrap support for F6ZN66 as seed ortholog is 100%.
Bootstrap support for Q29CL6 as seed ortholog is 100%.

Group of orthologs #2122. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 D.pseudoobscura:250

F6ZGK8              	100.00%		Q29LS9              	100.00%
Bootstrap support for F6ZGK8 as seed ortholog is 100%.
Bootstrap support for Q29LS9 as seed ortholog is 100%.

Group of orthologs #2123. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:250 D.pseudoobscura:250

H2XVS3              	100.00%		Q293H0              	100.00%
Bootstrap support for H2XVS3 as seed ortholog is 100%.
Bootstrap support for Q293H0 as seed ortholog is 100%.

Group of orthologs #2124. Best score 250 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 D.pseudoobscura:70

Q4H3S1              	100.00%		Q29PL1              	100.00%
Bootstrap support for Q4H3S1 as seed ortholog is 99%.
Bootstrap support for Q29PL1 as seed ortholog is 86%.

Group of orthologs #2125. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 D.pseudoobscura:249

F7ALU0              	100.00%		Q29M78              	100.00%
                    	       		Q297I5              	11.28%
Bootstrap support for F7ALU0 as seed ortholog is 100%.
Bootstrap support for Q29M78 as seed ortholog is 100%.

Group of orthologs #2126. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 D.pseudoobscura:249

F6Q7D4              	100.00%		B5DLM3              	100.00%
Bootstrap support for F6Q7D4 as seed ortholog is 100%.
Bootstrap support for B5DLM3 as seed ortholog is 100%.

Group of orthologs #2127. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 D.pseudoobscura:56

F6USY0              	100.00%		Q29CD0              	100.00%
Bootstrap support for F6USY0 as seed ortholog is 96%.
Bootstrap support for Q29CD0 as seed ortholog is 91%.

Group of orthologs #2128. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:249 D.pseudoobscura:249

F6SYP3              	100.00%		Q29I66              	100.00%
Bootstrap support for F6SYP3 as seed ortholog is 100%.
Bootstrap support for Q29I66 as seed ortholog is 100%.

Group of orthologs #2129. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 D.pseudoobscura:196

F6TXW3              	100.00%		Q29NP1              	100.00%
Bootstrap support for F6TXW3 as seed ortholog is 100%.
Bootstrap support for Q29NP1 as seed ortholog is 100%.

Group of orthologs #2130. Best score 249 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 D.pseudoobscura:249

H2XR17              	100.00%		Q29L74              	100.00%
Bootstrap support for H2XR17 as seed ortholog is 99%.
Bootstrap support for Q29L74 as seed ortholog is 100%.

Group of orthologs #2131. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 D.pseudoobscura:145

F6V771              	100.00%		Q290J2              	100.00%
                    	       		Q290J3              	8.27%
Bootstrap support for F6V771 as seed ortholog is 100%.
Bootstrap support for Q290J2 as seed ortholog is 99%.

Group of orthologs #2132. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 D.pseudoobscura:248

F6U1H7              	100.00%		Q29NU0              	100.00%
                    	       		Q291D6              	37.92%
Bootstrap support for F6U1H7 as seed ortholog is 95%.
Bootstrap support for Q29NU0 as seed ortholog is 100%.

Group of orthologs #2133. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 D.pseudoobscura:177

F6TDZ5              	100.00%		B5DQC6              	100.00%
Bootstrap support for F6TDZ5 as seed ortholog is 100%.
Bootstrap support for B5DQC6 as seed ortholog is 99%.

Group of orthologs #2134. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 D.pseudoobscura:248

F6V5K2              	100.00%		B5DM27              	100.00%
Bootstrap support for F6V5K2 as seed ortholog is 100%.
Bootstrap support for B5DM27 as seed ortholog is 100%.

Group of orthologs #2135. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 D.pseudoobscura:67

F6VIA9              	100.00%		B5E0J9              	100.00%
Bootstrap support for F6VIA9 as seed ortholog is 100%.
Bootstrap support for B5E0J9 as seed ortholog is 98%.

Group of orthologs #2136. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 D.pseudoobscura:248

F6TLE4              	100.00%		Q29BR9              	100.00%
Bootstrap support for F6TLE4 as seed ortholog is 100%.
Bootstrap support for Q29BR9 as seed ortholog is 100%.

Group of orthologs #2137. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 D.pseudoobscura:248

F6YDS2              	100.00%		Q294B9              	100.00%
Bootstrap support for F6YDS2 as seed ortholog is 100%.
Bootstrap support for Q294B9 as seed ortholog is 100%.

Group of orthologs #2138. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 D.pseudoobscura:248

F6Z4U5              	100.00%		Q291B3              	100.00%
Bootstrap support for F6Z4U5 as seed ortholog is 100%.
Bootstrap support for Q291B3 as seed ortholog is 100%.

Group of orthologs #2139. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 D.pseudoobscura:248

F6ZPU3              	100.00%		Q291B6              	100.00%
Bootstrap support for F6ZPU3 as seed ortholog is 100%.
Bootstrap support for Q291B6 as seed ortholog is 100%.

Group of orthologs #2140. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 D.pseudoobscura:248

Q5IFL5              	100.00%		B5DMS3              	100.00%
Bootstrap support for Q5IFL5 as seed ortholog is 100%.
Bootstrap support for B5DMS3 as seed ortholog is 100%.

Group of orthologs #2141. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 D.pseudoobscura:79

F7APJ4              	100.00%		Q29DD8              	100.00%
Bootstrap support for F7APJ4 as seed ortholog is 100%.
Bootstrap support for Q29DD8 as seed ortholog is 98%.

Group of orthologs #2142. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 D.pseudoobscura:187

F6ZW37              	100.00%		Q29JH0              	100.00%
Bootstrap support for F6ZW37 as seed ortholog is 100%.
Bootstrap support for Q29JH0 as seed ortholog is 99%.

Group of orthologs #2143. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 D.pseudoobscura:248

F6YXT8              	100.00%		Q29P67              	100.00%
Bootstrap support for F6YXT8 as seed ortholog is 100%.
Bootstrap support for Q29P67 as seed ortholog is 100%.

Group of orthologs #2144. Best score 248 bits
Score difference with first non-orthologous sequence - C.intestinalis:248 D.pseudoobscura:248

H2XJH4              	100.00%		Q29LM1              	100.00%
Bootstrap support for H2XJH4 as seed ortholog is 100%.
Bootstrap support for Q29LM1 as seed ortholog is 100%.

Group of orthologs #2145. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 D.pseudoobscura:22

F6UK51              	100.00%		Q29CI8              	100.00%
                    	       		B5DVK4              	25.29%
                    	       		B5DVK3              	13.79%
Bootstrap support for F6UK51 as seed ortholog is 100%.
Bootstrap support for Q29CI8 as seed ortholog is 83%.

Group of orthologs #2146. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 D.pseudoobscura:94

F7AZA1              	100.00%		B5DL93              	100.00%
                    	       		B5DW67              	66.38%
Bootstrap support for F7AZA1 as seed ortholog is 100%.
Bootstrap support for B5DL93 as seed ortholog is 99%.

Group of orthologs #2147. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 D.pseudoobscura:247

Q4H3H4              	100.00%		Q2M156              	100.00%
H2XPZ2              	6.86%		
Bootstrap support for Q4H3H4 as seed ortholog is 84%.
Bootstrap support for Q2M156 as seed ortholog is 100%.

Group of orthologs #2148. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 D.pseudoobscura:163

F6S968              	100.00%		Q295E7              	100.00%
Bootstrap support for F6S968 as seed ortholog is 100%.
Bootstrap support for Q295E7 as seed ortholog is 100%.

Group of orthologs #2149. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 D.pseudoobscura:247

F6Z8E9              	100.00%		B5DTF9              	100.00%
Bootstrap support for F6Z8E9 as seed ortholog is 100%.
Bootstrap support for B5DTF9 as seed ortholog is 100%.

Group of orthologs #2150. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 D.pseudoobscura:115

F6S2W5              	100.00%		Q29H12              	100.00%
Bootstrap support for F6S2W5 as seed ortholog is 100%.
Bootstrap support for Q29H12 as seed ortholog is 100%.

Group of orthologs #2151. Best score 247 bits
Score difference with first non-orthologous sequence - C.intestinalis:247 D.pseudoobscura:72

F7A5A0              	100.00%		Q295I4              	100.00%
Bootstrap support for F7A5A0 as seed ortholog is 100%.
Bootstrap support for Q295I4 as seed ortholog is 99%.

Group of orthologs #2152. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 D.pseudoobscura:246

F6Q3Y2              	100.00%		Q292H8              	100.00%
Bootstrap support for F6Q3Y2 as seed ortholog is 100%.
Bootstrap support for Q292H8 as seed ortholog is 100%.

Group of orthologs #2153. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 D.pseudoobscura:246

H2XNK3              	100.00%		B5DI99              	100.00%
Bootstrap support for H2XNK3 as seed ortholog is 100%.
Bootstrap support for B5DI99 as seed ortholog is 100%.

Group of orthologs #2154. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 D.pseudoobscura:246

F6YW41              	100.00%		Q28Y56              	100.00%
Bootstrap support for F6YW41 as seed ortholog is 100%.
Bootstrap support for Q28Y56 as seed ortholog is 100%.

Group of orthologs #2155. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 D.pseudoobscura:97

F7BH23              	100.00%		I5APL5              	100.00%
Bootstrap support for F7BH23 as seed ortholog is 99%.
Bootstrap support for I5APL5 as seed ortholog is 99%.

Group of orthologs #2156. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 D.pseudoobscura:246

F6WPY5              	100.00%		Q29F87              	100.00%
Bootstrap support for F6WPY5 as seed ortholog is 100%.
Bootstrap support for Q29F87 as seed ortholog is 100%.

Group of orthologs #2157. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 D.pseudoobscura:246

H2XLX2              	100.00%		I5ANK4              	100.00%
Bootstrap support for H2XLX2 as seed ortholog is 100%.
Bootstrap support for I5ANK4 as seed ortholog is 100%.

Group of orthologs #2158. Best score 246 bits
Score difference with first non-orthologous sequence - C.intestinalis:246 D.pseudoobscura:246

F6UUV5              	100.00%		Q29NM8              	100.00%
Bootstrap support for F6UUV5 as seed ortholog is 100%.
Bootstrap support for Q29NM8 as seed ortholog is 100%.

Group of orthologs #2159. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 D.pseudoobscura:245

F6S1A9              	100.00%		B5DQN5              	100.00%
Bootstrap support for F6S1A9 as seed ortholog is 100%.
Bootstrap support for B5DQN5 as seed ortholog is 100%.

Group of orthologs #2160. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 D.pseudoobscura:245

F6TCF1              	100.00%		Q291S4              	100.00%
Bootstrap support for F6TCF1 as seed ortholog is 100%.
Bootstrap support for Q291S4 as seed ortholog is 100%.

Group of orthologs #2161. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 D.pseudoobscura:245

F6QRC2              	100.00%		Q29G35              	100.00%
Bootstrap support for F6QRC2 as seed ortholog is 56%.
Alternative seed ortholog is F7ASL8 (4 bits away from this cluster)
Bootstrap support for Q29G35 as seed ortholog is 100%.

Group of orthologs #2162. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 D.pseudoobscura:245

F6TRZ2              	100.00%		Q29NF8              	100.00%
Bootstrap support for F6TRZ2 as seed ortholog is 100%.
Bootstrap support for Q29NF8 as seed ortholog is 100%.

Group of orthologs #2163. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 D.pseudoobscura:245

F7A9D9              	100.00%		Q299S8              	100.00%
Bootstrap support for F7A9D9 as seed ortholog is 100%.
Bootstrap support for Q299S8 as seed ortholog is 100%.

Group of orthologs #2164. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 D.pseudoobscura:245

F7B6C9              	100.00%		Q299C4              	100.00%
Bootstrap support for F7B6C9 as seed ortholog is 100%.
Bootstrap support for Q299C4 as seed ortholog is 100%.

Group of orthologs #2165. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 D.pseudoobscura:245

Q1RL41              	100.00%		B5DWT1              	100.00%
Bootstrap support for Q1RL41 as seed ortholog is 100%.
Bootstrap support for B5DWT1 as seed ortholog is 100%.

Group of orthologs #2166. Best score 245 bits
Score difference with first non-orthologous sequence - C.intestinalis:245 D.pseudoobscura:245

F7AF81              	100.00%		Q29M37              	100.00%
Bootstrap support for F7AF81 as seed ortholog is 100%.
Bootstrap support for Q29M37 as seed ortholog is 100%.

Group of orthologs #2167. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 D.pseudoobscura:244

F6ZVR9              	100.00%		Q29PB6              	100.00%
F6PWZ1              	21.11%		
F7AJJ2              	17.20%		
F6TUF1              	15.58%		
H2Y1L6              	10.43%		
Bootstrap support for F6ZVR9 as seed ortholog is 100%.
Bootstrap support for Q29PB6 as seed ortholog is 100%.

Group of orthologs #2168. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 D.pseudoobscura:244

Q07068              	100.00%		I5APU6              	100.00%
F6PJI6              	99.30%		
F6TT18              	9.51%		
Bootstrap support for Q07068 as seed ortholog is 100%.
Bootstrap support for I5APU6 as seed ortholog is 100%.

Group of orthologs #2169. Best score 244 bits
Score difference with first non-orthologous sequence - C.intestinalis:244 D.pseudoobscura:244

H2Y3N6              	100.00%		Q29GC0              	100.00%
Bootstrap support for H2Y3N6 as seed ortholog is 100%.
Bootstrap support for Q29GC0 as seed ortholog is 100%.

Group of orthologs #2170. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 D.pseudoobscura:20

F6VL03              	100.00%		Q295H0              	100.00%
F6YSJ3              	18.54%		
Bootstrap support for F6VL03 as seed ortholog is 88%.
Bootstrap support for Q295H0 as seed ortholog is 75%.

Group of orthologs #2171. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 D.pseudoobscura:243

F6R2Y1              	100.00%		B5DYR5              	100.00%
Bootstrap support for F6R2Y1 as seed ortholog is 100%.
Bootstrap support for B5DYR5 as seed ortholog is 100%.

Group of orthologs #2172. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 D.pseudoobscura:81

F6XND0              	100.00%		Q29J12              	100.00%
Bootstrap support for F6XND0 as seed ortholog is 96%.
Bootstrap support for Q29J12 as seed ortholog is 99%.

Group of orthologs #2173. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 D.pseudoobscura:46

F6VND6              	100.00%		Q2LYQ2              	100.00%
Bootstrap support for F6VND6 as seed ortholog is 67%.
Alternative seed ortholog is Q4H2X6 (35 bits away from this cluster)
Bootstrap support for Q2LYQ2 as seed ortholog is 89%.

Group of orthologs #2174. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 D.pseudoobscura:243

F7B6W8              	100.00%		Q29G74              	100.00%
Bootstrap support for F7B6W8 as seed ortholog is 100%.
Bootstrap support for Q29G74 as seed ortholog is 100%.

Group of orthologs #2175. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:243 D.pseudoobscura:162

F6YLC1              	100.00%		Q2LZR5              	100.00%
Bootstrap support for F6YLC1 as seed ortholog is 100%.
Bootstrap support for Q2LZR5 as seed ortholog is 100%.

Group of orthologs #2176. Best score 243 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 D.pseudoobscura:33

H2Y3T6              	100.00%		Q29D83              	100.00%
Bootstrap support for H2Y3T6 as seed ortholog is 94%.
Bootstrap support for Q29D83 as seed ortholog is 92%.

Group of orthologs #2177. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 D.pseudoobscura:135

F6UXG6              	100.00%		B5DKM4              	100.00%
Bootstrap support for F6UXG6 as seed ortholog is 100%.
Bootstrap support for B5DKM4 as seed ortholog is 100%.

Group of orthologs #2178. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 D.pseudoobscura:242

F6QWW6              	100.00%		B5DZH8              	100.00%
Bootstrap support for F6QWW6 as seed ortholog is 100%.
Bootstrap support for B5DZH8 as seed ortholog is 100%.

Group of orthologs #2179. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 D.pseudoobscura:67

F6SBR0              	100.00%		B5E0W7              	100.00%
Bootstrap support for F6SBR0 as seed ortholog is 99%.
Bootstrap support for B5E0W7 as seed ortholog is 99%.

Group of orthologs #2180. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 D.pseudoobscura:116

F6SW03              	100.00%		Q28YH8              	100.00%
Bootstrap support for F6SW03 as seed ortholog is 100%.
Bootstrap support for Q28YH8 as seed ortholog is 99%.

Group of orthologs #2181. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 D.pseudoobscura:242

F6RE18              	100.00%		Q29AN8              	100.00%
Bootstrap support for F6RE18 as seed ortholog is 100%.
Bootstrap support for Q29AN8 as seed ortholog is 100%.

Group of orthologs #2182. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 D.pseudoobscura:242

F6PQN7              	100.00%		Q29FA1              	100.00%
Bootstrap support for F6PQN7 as seed ortholog is 100%.
Bootstrap support for Q29FA1 as seed ortholog is 100%.

Group of orthologs #2183. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 D.pseudoobscura:183

F6T453              	100.00%		Q29DY8              	100.00%
Bootstrap support for F6T453 as seed ortholog is 100%.
Bootstrap support for Q29DY8 as seed ortholog is 100%.

Group of orthologs #2184. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 D.pseudoobscura:242

F6QDX7              	100.00%		Q29KS6              	100.00%
Bootstrap support for F6QDX7 as seed ortholog is 100%.
Bootstrap support for Q29KS6 as seed ortholog is 100%.

Group of orthologs #2185. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 D.pseudoobscura:242

F6UFA9              	100.00%		Q29E53              	100.00%
Bootstrap support for F6UFA9 as seed ortholog is 100%.
Bootstrap support for Q29E53 as seed ortholog is 100%.

Group of orthologs #2186. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 D.pseudoobscura:242

F6YIJ5              	100.00%		Q2LZ36              	100.00%
Bootstrap support for F6YIJ5 as seed ortholog is 100%.
Bootstrap support for Q2LZ36 as seed ortholog is 100%.

Group of orthologs #2187. Best score 242 bits
Score difference with first non-orthologous sequence - C.intestinalis:242 D.pseudoobscura:242

Q1RL40              	100.00%		Q28XJ6              	100.00%
Bootstrap support for Q1RL40 as seed ortholog is 100%.
Bootstrap support for Q28XJ6 as seed ortholog is 100%.

Group of orthologs #2188. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 D.pseudoobscura:241

F6SHN0              	100.00%		Q29EG3              	100.00%
F6TSK2              	100.00%		B5DN57              	100.00%
                    	       		Q29GS4              	61.67%
                    	       		Q28X77              	12.99%
Bootstrap support for F6SHN0 as seed ortholog is 100%.
Bootstrap support for F6TSK2 as seed ortholog is 100%.
Bootstrap support for Q29EG3 as seed ortholog is 100%.
Bootstrap support for B5DN57 as seed ortholog is 100%.

Group of orthologs #2189. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 D.pseudoobscura:165

F6RYV9              	100.00%		B5DI81              	100.00%
Bootstrap support for F6RYV9 as seed ortholog is 100%.
Bootstrap support for B5DI81 as seed ortholog is 100%.

Group of orthologs #2190. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 D.pseudoobscura:128

F6W3Q3              	100.00%		Q29GE8              	100.00%
Bootstrap support for F6W3Q3 as seed ortholog is 100%.
Bootstrap support for Q29GE8 as seed ortholog is 100%.

Group of orthologs #2191. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:241 D.pseudoobscura:241

F6ZK09              	100.00%		Q29CR7              	100.00%
Bootstrap support for F6ZK09 as seed ortholog is 100%.
Bootstrap support for Q29CR7 as seed ortholog is 100%.

Group of orthologs #2192. Best score 241 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 D.pseudoobscura:182

H2XNI7              	100.00%		Q2LZ84              	100.00%
Bootstrap support for H2XNI7 as seed ortholog is 99%.
Bootstrap support for Q2LZ84 as seed ortholog is 99%.

Group of orthologs #2193. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:240

F6Z6W8              	100.00%		Q29EJ0              	100.00%
F7A7R4              	16.24%		Q29EI9              	49.91%
Bootstrap support for F6Z6W8 as seed ortholog is 99%.
Bootstrap support for Q29EJ0 as seed ortholog is 100%.

Group of orthologs #2194. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 D.pseudoobscura:65

F6TKL9              	100.00%		B5DQB3              	100.00%
Bootstrap support for F6TKL9 as seed ortholog is 100%.
Bootstrap support for B5DQB3 as seed ortholog is 98%.

Group of orthologs #2195. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 D.pseudoobscura:69

F6R8W1              	100.00%		Q298F4              	100.00%
Bootstrap support for F6R8W1 as seed ortholog is 97%.
Bootstrap support for Q298F4 as seed ortholog is 98%.

Group of orthologs #2196. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 D.pseudoobscura:240

F6SS76              	100.00%		Q29E60              	100.00%
Bootstrap support for F6SS76 as seed ortholog is 100%.
Bootstrap support for Q29E60 as seed ortholog is 100%.

Group of orthologs #2197. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 D.pseudoobscura:240

F6SR47              	100.00%		Q29EU5              	100.00%
Bootstrap support for F6SR47 as seed ortholog is 100%.
Bootstrap support for Q29EU5 as seed ortholog is 100%.

Group of orthologs #2198. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 D.pseudoobscura:240

F6TVY6              	100.00%		Q29DA7              	100.00%
Bootstrap support for F6TVY6 as seed ortholog is 100%.
Bootstrap support for Q29DA7 as seed ortholog is 100%.

Group of orthologs #2199. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 D.pseudoobscura:240

F6TK98              	100.00%		Q29M03              	100.00%
Bootstrap support for F6TK98 as seed ortholog is 100%.
Bootstrap support for Q29M03 as seed ortholog is 100%.

Group of orthologs #2200. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 D.pseudoobscura:240

F6W3C3              	100.00%		Q29IN0              	100.00%
Bootstrap support for F6W3C3 as seed ortholog is 100%.
Bootstrap support for Q29IN0 as seed ortholog is 100%.

Group of orthologs #2201. Best score 240 bits
Score difference with first non-orthologous sequence - C.intestinalis:240 D.pseudoobscura:240

F6Z8I7              	100.00%		Q29M84              	100.00%
Bootstrap support for F6Z8I7 as seed ortholog is 100%.
Bootstrap support for Q29M84 as seed ortholog is 100%.

Group of orthologs #2202. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:129

F6TMT5              	100.00%		Q299Z2              	100.00%
                    	       		B5DVQ6              	31.48%
Bootstrap support for F6TMT5 as seed ortholog is 100%.
Bootstrap support for Q299Z2 as seed ortholog is 100%.

Group of orthologs #2203. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 D.pseudoobscura:158

F6VLD0              	100.00%		Q28YL0              	100.00%
Bootstrap support for F6VLD0 as seed ortholog is 100%.
Bootstrap support for Q28YL0 as seed ortholog is 100%.

Group of orthologs #2204. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 D.pseudoobscura:239

F6ZYP8              	100.00%		B5DT44              	100.00%
Bootstrap support for F6ZYP8 as seed ortholog is 100%.
Bootstrap support for B5DT44 as seed ortholog is 100%.

Group of orthologs #2205. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 D.pseudoobscura:239

F6R012              	100.00%		Q29ML2              	100.00%
Bootstrap support for F6R012 as seed ortholog is 100%.
Bootstrap support for Q29ML2 as seed ortholog is 100%.

Group of orthologs #2206. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 D.pseudoobscura:239

F6ZIM0              	100.00%		Q299A8              	100.00%
Bootstrap support for F6ZIM0 as seed ortholog is 100%.
Bootstrap support for Q299A8 as seed ortholog is 100%.

Group of orthologs #2207. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 D.pseudoobscura:239

F7BKD9              	100.00%		Q29BZ6              	100.00%
Bootstrap support for F7BKD9 as seed ortholog is 100%.
Bootstrap support for Q29BZ6 as seed ortholog is 100%.

Group of orthologs #2208. Best score 239 bits
Score difference with first non-orthologous sequence - C.intestinalis:239 D.pseudoobscura:239

F6YSB9              	100.00%		Q2LYK7              	100.00%
Bootstrap support for F6YSB9 as seed ortholog is 100%.
Bootstrap support for Q2LYK7 as seed ortholog is 100%.

Group of orthologs #2209. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 D.pseudoobscura:67

H2XJX5              	100.00%		Q29FG6              	100.00%
F6QRT7              	11.78%		
Bootstrap support for H2XJX5 as seed ortholog is 100%.
Bootstrap support for Q29FG6 as seed ortholog is 96%.

Group of orthologs #2210. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 D.pseudoobscura:238

F6RLX1              	100.00%		Q29BA0              	100.00%
Bootstrap support for F6RLX1 as seed ortholog is 100%.
Bootstrap support for Q29BA0 as seed ortholog is 100%.

Group of orthologs #2211. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 D.pseudoobscura:238

F6T385              	100.00%		Q29AB1              	100.00%
Bootstrap support for F6T385 as seed ortholog is 100%.
Bootstrap support for Q29AB1 as seed ortholog is 100%.

Group of orthologs #2212. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 D.pseudoobscura:238

F6RTY1              	100.00%		Q29HI8              	100.00%
Bootstrap support for F6RTY1 as seed ortholog is 100%.
Bootstrap support for Q29HI8 as seed ortholog is 100%.

Group of orthologs #2213. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 D.pseudoobscura:238

F7BBJ6              	100.00%		Q28YL5              	100.00%
Bootstrap support for F7BBJ6 as seed ortholog is 100%.
Bootstrap support for Q28YL5 as seed ortholog is 100%.

Group of orthologs #2214. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 D.pseudoobscura:238

F7AKT1              	100.00%		Q29BS2              	100.00%
Bootstrap support for F7AKT1 as seed ortholog is 100%.
Bootstrap support for Q29BS2 as seed ortholog is 100%.

Group of orthologs #2215. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 D.pseudoobscura:174

H2XSU1              	100.00%		Q29EG7              	100.00%
Bootstrap support for H2XSU1 as seed ortholog is 100%.
Bootstrap support for Q29EG7 as seed ortholog is 100%.

Group of orthologs #2216. Best score 238 bits
Score difference with first non-orthologous sequence - C.intestinalis:238 D.pseudoobscura:238

Q4H2Z5              	100.00%		Q298G4              	100.00%
Bootstrap support for Q4H2Z5 as seed ortholog is 100%.
Bootstrap support for Q298G4 as seed ortholog is 100%.

Group of orthologs #2217. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 D.pseudoobscura:69

F7BIC8              	100.00%		Q28XU6              	100.00%
                    	       		B5DYM2              	25.53%
                    	       		Q28XU7              	25.53%
Bootstrap support for F7BIC8 as seed ortholog is 99%.
Bootstrap support for Q28XU6 as seed ortholog is 96%.

Group of orthologs #2218. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 D.pseudoobscura:51

F6VRB9              	100.00%		Q29C90              	100.00%
                    	       		Q293Q9              	11.10%
Bootstrap support for F6VRB9 as seed ortholog is 99%.
Bootstrap support for Q29C90 as seed ortholog is 91%.

Group of orthologs #2219. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 D.pseudoobscura:237

F6R180              	100.00%		Q298M1              	100.00%
Bootstrap support for F6R180 as seed ortholog is 100%.
Bootstrap support for Q298M1 as seed ortholog is 100%.

Group of orthologs #2220. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 D.pseudoobscura:237

F7AUL7              	100.00%		B5DY60              	100.00%
Bootstrap support for F7AUL7 as seed ortholog is 100%.
Bootstrap support for B5DY60 as seed ortholog is 100%.

Group of orthologs #2221. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 D.pseudoobscura:237

F6UEE4              	100.00%		Q29LG3              	100.00%
Bootstrap support for F6UEE4 as seed ortholog is 100%.
Bootstrap support for Q29LG3 as seed ortholog is 100%.

Group of orthologs #2222. Best score 237 bits
Score difference with first non-orthologous sequence - C.intestinalis:237 D.pseudoobscura:237

H2Y3A3              	100.00%		Q28ZU7              	100.00%
Bootstrap support for H2Y3A3 as seed ortholog is 100%.
Bootstrap support for Q28ZU7 as seed ortholog is 100%.

Group of orthologs #2223. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 D.pseudoobscura:236

H2XPA7              	100.00%		Q29BB0              	100.00%
                    	       		B5DW01              	19.80%
                    	       		B5DQR9              	16.27%
                    	       		B5DYT2              	8.63%
Bootstrap support for H2XPA7 as seed ortholog is 100%.
Bootstrap support for Q29BB0 as seed ortholog is 100%.

Group of orthologs #2224. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:102

F6PJV8              	100.00%		Q29D46              	100.00%
                    	       		B5DRQ8              	34.86%
                    	       		B5DPU2              	9.71%
Bootstrap support for F6PJV8 as seed ortholog is 99%.
Bootstrap support for Q29D46 as seed ortholog is 99%.

Group of orthologs #2225. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 D.pseudoobscura:81

F7A686              	100.00%		B5DXB8              	100.00%
F7BP82              	18.63%		
Bootstrap support for F7A686 as seed ortholog is 99%.
Bootstrap support for B5DXB8 as seed ortholog is 97%.

Group of orthologs #2226. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 D.pseudoobscura:236

F6PZD7              	100.00%		Q296H6              	100.00%
Bootstrap support for F6PZD7 as seed ortholog is 100%.
Bootstrap support for Q296H6 as seed ortholog is 100%.

Group of orthologs #2227. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 D.pseudoobscura:77

F6S6V5              	100.00%		Q29AP9              	100.00%
Bootstrap support for F6S6V5 as seed ortholog is 99%.
Bootstrap support for Q29AP9 as seed ortholog is 99%.

Group of orthologs #2228. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 D.pseudoobscura:236

F7ALJ6              	100.00%		B5E0H4              	100.00%
Bootstrap support for F7ALJ6 as seed ortholog is 100%.
Bootstrap support for B5E0H4 as seed ortholog is 100%.

Group of orthologs #2229. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 D.pseudoobscura:171

F6XJX5              	100.00%		Q294Q9              	100.00%
Bootstrap support for F6XJX5 as seed ortholog is 99%.
Bootstrap support for Q294Q9 as seed ortholog is 100%.

Group of orthologs #2230. Best score 236 bits
Score difference with first non-orthologous sequence - C.intestinalis:236 D.pseudoobscura:236

F7B314              	100.00%		Q29MD3              	100.00%
Bootstrap support for F7B314 as seed ortholog is 100%.
Bootstrap support for Q29MD3 as seed ortholog is 100%.

Group of orthologs #2231. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 D.pseudoobscura:65

F6ZHC8              	100.00%		B5DNP6              	100.00%
                    	       		B5DNQ1              	10.87%
Bootstrap support for F6ZHC8 as seed ortholog is 96%.
Bootstrap support for B5DNP6 as seed ortholog is 98%.

Group of orthologs #2232. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 D.pseudoobscura:235

F6XNK4              	100.00%		B5DRX9              	100.00%
Bootstrap support for F6XNK4 as seed ortholog is 100%.
Bootstrap support for B5DRX9 as seed ortholog is 100%.

Group of orthologs #2233. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 D.pseudoobscura:235

F6QQ08              	100.00%		Q29CG9              	100.00%
Bootstrap support for F6QQ08 as seed ortholog is 100%.
Bootstrap support for Q29CG9 as seed ortholog is 100%.

Group of orthologs #2234. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 D.pseudoobscura:235

F6WQE3              	100.00%		Q297L1              	100.00%
Bootstrap support for F6WQE3 as seed ortholog is 100%.
Bootstrap support for Q297L1 as seed ortholog is 100%.

Group of orthologs #2235. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 D.pseudoobscura:235

F6ZCI6              	100.00%		Q294S2              	100.00%
Bootstrap support for F6ZCI6 as seed ortholog is 100%.
Bootstrap support for Q294S2 as seed ortholog is 100%.

Group of orthologs #2236. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 D.pseudoobscura:235

F7AX45              	100.00%		Q2M0A5              	100.00%
Bootstrap support for F7AX45 as seed ortholog is 100%.
Bootstrap support for Q2M0A5 as seed ortholog is 100%.

Group of orthologs #2237. Best score 235 bits
Score difference with first non-orthologous sequence - C.intestinalis:235 D.pseudoobscura:144

Q1RLG5              	100.00%		Q29EF2              	100.00%
Bootstrap support for Q1RLG5 as seed ortholog is 100%.
Bootstrap support for Q29EF2 as seed ortholog is 100%.

Group of orthologs #2238. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 D.pseudoobscura:234

H2XR12              	100.00%		Q29MF0              	100.00%
                    	       		Q295R1              	10.24%
                    	       		Q29DJ4              	7.18%
                    	       		Q28X19              	7.02%
Bootstrap support for H2XR12 as seed ortholog is 100%.
Bootstrap support for Q29MF0 as seed ortholog is 100%.

Group of orthologs #2239. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 D.pseudoobscura:108

F6SBY9              	100.00%		Q297J8              	100.00%
Q2PEE5              	17.18%		
Bootstrap support for F6SBY9 as seed ortholog is 100%.
Bootstrap support for Q297J8 as seed ortholog is 99%.

Group of orthologs #2240. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 D.pseudoobscura:162

F6UHS2              	100.00%		Q296Z5              	100.00%
                    	       		B5DNC4              	25.18%
Bootstrap support for F6UHS2 as seed ortholog is 100%.
Bootstrap support for Q296Z5 as seed ortholog is 100%.

Group of orthologs #2241. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:234

F6R2P7              	100.00%		Q29F17              	100.00%
Bootstrap support for F6R2P7 as seed ortholog is 99%.
Bootstrap support for Q29F17 as seed ortholog is 100%.

Group of orthologs #2242. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 D.pseudoobscura:234

F6UUI1              	100.00%		Q298M4              	100.00%
Bootstrap support for F6UUI1 as seed ortholog is 100%.
Bootstrap support for Q298M4 as seed ortholog is 100%.

Group of orthologs #2243. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 D.pseudoobscura:90

F6XDD9              	100.00%		Q29AI3              	100.00%
Bootstrap support for F6XDD9 as seed ortholog is 100%.
Bootstrap support for Q29AI3 as seed ortholog is 99%.

Group of orthologs #2244. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:234 D.pseudoobscura:234

F7A2P1              	100.00%		Q296B2              	100.00%
Bootstrap support for F7A2P1 as seed ortholog is 100%.
Bootstrap support for Q296B2 as seed ortholog is 100%.

Group of orthologs #2245. Best score 234 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:234

Q6XLI4              	100.00%		Q2LZX4              	100.00%
Bootstrap support for Q6XLI4 as seed ortholog is 98%.
Bootstrap support for Q2LZX4 as seed ortholog is 100%.

Group of orthologs #2246. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 D.pseudoobscura:233

L7N0R5              	100.00%		Q29B22              	100.00%
                    	       		Q29BH1              	14.67%
Bootstrap support for L7N0R5 as seed ortholog is 100%.
Bootstrap support for Q29B22 as seed ortholog is 100%.

Group of orthologs #2247. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 D.pseudoobscura:233

F6UMR8              	100.00%		B5DHQ0              	100.00%
Bootstrap support for F6UMR8 as seed ortholog is 100%.
Bootstrap support for B5DHQ0 as seed ortholog is 100%.

Group of orthologs #2248. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:73

F6QC45              	100.00%		Q29HN2              	100.00%
Bootstrap support for F6QC45 as seed ortholog is 100%.
Bootstrap support for Q29HN2 as seed ortholog is 99%.

Group of orthologs #2249. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 D.pseudoobscura:101

F6X0F3              	100.00%		Q292Y5              	100.00%
Bootstrap support for F6X0F3 as seed ortholog is 100%.
Bootstrap support for Q292Y5 as seed ortholog is 99%.

Group of orthologs #2250. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 D.pseudoobscura:159

F6TKH9              	100.00%		Q29KH8              	100.00%
Bootstrap support for F6TKH9 as seed ortholog is 99%.
Bootstrap support for Q29KH8 as seed ortholog is 100%.

Group of orthologs #2251. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 D.pseudoobscura:233

F6UB54              	100.00%		Q29PA2              	100.00%
Bootstrap support for F6UB54 as seed ortholog is 100%.
Bootstrap support for Q29PA2 as seed ortholog is 100%.

Group of orthologs #2252. Best score 233 bits
Score difference with first non-orthologous sequence - C.intestinalis:233 D.pseudoobscura:233

F6YI87              	100.00%		Q29K23              	100.00%
Bootstrap support for F6YI87 as seed ortholog is 100%.
Bootstrap support for Q29K23 as seed ortholog is 100%.

Group of orthologs #2253. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 D.pseudoobscura:232

F6QLG8              	100.00%		Q29D42              	100.00%
Bootstrap support for F6QLG8 as seed ortholog is 100%.
Bootstrap support for Q29D42 as seed ortholog is 100%.

Group of orthologs #2254. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 D.pseudoobscura:109

F6TYS5              	100.00%		Q29FF4              	100.00%
Bootstrap support for F6TYS5 as seed ortholog is 100%.
Bootstrap support for Q29FF4 as seed ortholog is 100%.

Group of orthologs #2255. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:232 D.pseudoobscura:232

F6WB92              	100.00%		Q29DH6              	100.00%
Bootstrap support for F6WB92 as seed ortholog is 100%.
Bootstrap support for Q29DH6 as seed ortholog is 100%.

Group of orthologs #2256. Best score 232 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 D.pseudoobscura:27

F6YRX9              	100.00%		Q29I25              	100.00%
Bootstrap support for F6YRX9 as seed ortholog is 92%.
Bootstrap support for Q29I25 as seed ortholog is 80%.

Group of orthologs #2257. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 D.pseudoobscura:231

F6SDU1              	100.00%		Q29EH2              	100.00%
                    	       		B5DYQ5              	9.62%
                    	       		B5DYQ7              	8.93%
Bootstrap support for F6SDU1 as seed ortholog is 100%.
Bootstrap support for Q29EH2 as seed ortholog is 100%.

Group of orthologs #2258. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 D.pseudoobscura:231

F6VAT4              	100.00%		Q291S3              	100.00%
F6YS00              	11.22%		
Bootstrap support for F6VAT4 as seed ortholog is 100%.
Bootstrap support for Q291S3 as seed ortholog is 100%.

Group of orthologs #2259. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 D.pseudoobscura:86

F6TZK8              	100.00%		B5E134              	100.00%
Bootstrap support for F6TZK8 as seed ortholog is 100%.
Bootstrap support for B5E134 as seed ortholog is 99%.

Group of orthologs #2260. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 D.pseudoobscura:231

F6QRX3              	100.00%		Q29D53              	100.00%
Bootstrap support for F6QRX3 as seed ortholog is 100%.
Bootstrap support for Q29D53 as seed ortholog is 100%.

Group of orthologs #2261. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 D.pseudoobscura:231

F6ZSB0              	100.00%		B5DXR7              	100.00%
Bootstrap support for F6ZSB0 as seed ortholog is 100%.
Bootstrap support for B5DXR7 as seed ortholog is 100%.

Group of orthologs #2262. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:231 D.pseudoobscura:60

Q8T883              	100.00%		Q291Y4              	100.00%
Bootstrap support for Q8T883 as seed ortholog is 100%.
Bootstrap support for Q291Y4 as seed ortholog is 95%.

Group of orthologs #2263. Best score 231 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 D.pseudoobscura:183

H2XZC9              	100.00%		Q2LZZ0              	100.00%
Bootstrap support for H2XZC9 as seed ortholog is 99%.
Bootstrap support for Q2LZZ0 as seed ortholog is 100%.

Group of orthologs #2264. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 D.pseudoobscura:60

F6YI37              	100.00%		Q29N20              	100.00%
F7B4M8              	100.00%		Q29NC4              	100.00%
F6ST69              	33.23%		Q29N19              	41.17%
                    	       		Q29DS5              	19.87%
                    	       		B5DXR9              	14.79%
                    	       		Q290Y8              	14.63%
                    	       		Q28XV5              	8.83%
                    	       		Q2M134              	5.09%
Bootstrap support for F6YI37 as seed ortholog is 100%.
Bootstrap support for F7B4M8 as seed ortholog is 100%.
Bootstrap support for Q29N20 as seed ortholog is 92%.
Bootstrap support for Q29NC4 as seed ortholog is 78%.

Group of orthologs #2265. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 D.pseudoobscura:230

F6UDJ0              	100.00%		Q297C2              	100.00%
Bootstrap support for F6UDJ0 as seed ortholog is 100%.
Bootstrap support for Q297C2 as seed ortholog is 100%.

Group of orthologs #2266. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:230

F6TU56              	100.00%		Q299T4              	100.00%
Bootstrap support for F6TU56 as seed ortholog is 99%.
Bootstrap support for Q299T4 as seed ortholog is 100%.

Group of orthologs #2267. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 D.pseudoobscura:230

F6ZAR8              	100.00%		Q28YR4              	100.00%
Bootstrap support for F6ZAR8 as seed ortholog is 100%.
Bootstrap support for Q28YR4 as seed ortholog is 100%.

Group of orthologs #2268. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 D.pseudoobscura:230

F6SKS5              	100.00%		Q2M0V8              	100.00%
Bootstrap support for F6SKS5 as seed ortholog is 100%.
Bootstrap support for Q2M0V8 as seed ortholog is 100%.

Group of orthologs #2269. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 D.pseudoobscura:230

F6YNH3              	100.00%		Q29HE0              	100.00%
Bootstrap support for F6YNH3 as seed ortholog is 100%.
Bootstrap support for Q29HE0 as seed ortholog is 100%.

Group of orthologs #2270. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 D.pseudoobscura:230

H2XSK2              	100.00%		Q28Y85              	100.00%
Bootstrap support for H2XSK2 as seed ortholog is 100%.
Bootstrap support for Q28Y85 as seed ortholog is 100%.

Group of orthologs #2271. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 D.pseudoobscura:230

F6ZQ58              	100.00%		Q2LZ71              	100.00%
Bootstrap support for F6ZQ58 as seed ortholog is 100%.
Bootstrap support for Q2LZ71 as seed ortholog is 100%.

Group of orthologs #2272. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 D.pseudoobscura:230

Q4H3J7              	100.00%		Q298B5              	100.00%
Bootstrap support for Q4H3J7 as seed ortholog is 100%.
Bootstrap support for Q298B5 as seed ortholog is 100%.

Group of orthologs #2273. Best score 230 bits
Score difference with first non-orthologous sequence - C.intestinalis:230 D.pseudoobscura:230

Q7YZS7              	100.00%		Q29J06              	100.00%
Bootstrap support for Q7YZS7 as seed ortholog is 100%.
Bootstrap support for Q29J06 as seed ortholog is 100%.

Group of orthologs #2274. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 D.pseudoobscura:229

F6RG39              	100.00%		Q291V3              	100.00%
Bootstrap support for F6RG39 as seed ortholog is 100%.
Bootstrap support for Q291V3 as seed ortholog is 100%.

Group of orthologs #2275. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:140

F6QEE3              	100.00%		Q296L7              	100.00%
Bootstrap support for F6QEE3 as seed ortholog is 100%.
Bootstrap support for Q296L7 as seed ortholog is 99%.

Group of orthologs #2276. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 D.pseudoobscura:160

F6ZCY4              	100.00%		B5DX92              	100.00%
Bootstrap support for F6ZCY4 as seed ortholog is 100%.
Bootstrap support for B5DX92 as seed ortholog is 99%.

Group of orthologs #2277. Best score 229 bits
Score difference with first non-orthologous sequence - C.intestinalis:229 D.pseudoobscura:229

F6T0U6              	100.00%		Q29M27              	100.00%
Bootstrap support for F6T0U6 as seed ortholog is 100%.
Bootstrap support for Q29M27 as seed ortholog is 100%.

Group of orthologs #2278. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 D.pseudoobscura:228

F6RMP9              	100.00%		B5DK55              	100.00%
                    	       		Q29JM7              	38.55%
Bootstrap support for F6RMP9 as seed ortholog is 100%.
Bootstrap support for B5DK55 as seed ortholog is 100%.

Group of orthologs #2279. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 D.pseudoobscura:71

F6PR96              	100.00%		Q293Z6              	100.00%
Bootstrap support for F6PR96 as seed ortholog is 100%.
Bootstrap support for Q293Z6 as seed ortholog is 99%.

Group of orthologs #2280. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 D.pseudoobscura:228

F6ZE91              	100.00%		B5E0X3              	100.00%
Bootstrap support for F6ZE91 as seed ortholog is 100%.
Bootstrap support for B5E0X3 as seed ortholog is 100%.

Group of orthologs #2281. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 D.pseudoobscura:148

F6ZJP7              	100.00%		Q28XI4              	100.00%
Bootstrap support for F6ZJP7 as seed ortholog is 100%.
Bootstrap support for Q28XI4 as seed ortholog is 100%.

Group of orthologs #2282. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 D.pseudoobscura:228

F6Y0M4              	100.00%		Q29EM7              	100.00%
Bootstrap support for F6Y0M4 as seed ortholog is 100%.
Bootstrap support for Q29EM7 as seed ortholog is 100%.

Group of orthologs #2283. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 D.pseudoobscura:228

F6W7H5              	100.00%		Q29KQ8              	100.00%
Bootstrap support for F6W7H5 as seed ortholog is 100%.
Bootstrap support for Q29KQ8 as seed ortholog is 100%.

Group of orthologs #2284. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 D.pseudoobscura:228

F6ZM98              	100.00%		Q29KM4              	100.00%
Bootstrap support for F6ZM98 as seed ortholog is 100%.
Bootstrap support for Q29KM4 as seed ortholog is 100%.

Group of orthologs #2285. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 D.pseudoobscura:228

H2Y1D7              	100.00%		Q29FV5              	100.00%
Bootstrap support for H2Y1D7 as seed ortholog is 100%.
Bootstrap support for Q29FV5 as seed ortholog is 100%.

Group of orthologs #2286. Best score 228 bits
Score difference with first non-orthologous sequence - C.intestinalis:228 D.pseudoobscura:228

H2Y0I5              	100.00%		Q29JE6              	100.00%
Bootstrap support for H2Y0I5 as seed ortholog is 100%.
Bootstrap support for Q29JE6 as seed ortholog is 100%.

Group of orthologs #2287. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 D.pseudoobscura:227

F6UAH7              	100.00%		B5DHQ6              	100.00%
                    	       		Q29DZ0              	67.78%
Bootstrap support for F6UAH7 as seed ortholog is 100%.
Bootstrap support for B5DHQ6 as seed ortholog is 100%.

Group of orthologs #2288. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 D.pseudoobscura:227

F6ZID3              	100.00%		B5DIL4              	100.00%
                    	       		Q29CG1              	48.60%
Bootstrap support for F6ZID3 as seed ortholog is 100%.
Bootstrap support for B5DIL4 as seed ortholog is 100%.

Group of orthologs #2289. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 D.pseudoobscura:227

F6R8Z1              	100.00%		Q292F5              	100.00%
Bootstrap support for F6R8Z1 as seed ortholog is 100%.
Bootstrap support for Q292F5 as seed ortholog is 100%.

Group of orthologs #2290. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 D.pseudoobscura:182

F6SGR7              	100.00%		Q29C72              	100.00%
Bootstrap support for F6SGR7 as seed ortholog is 100%.
Bootstrap support for Q29C72 as seed ortholog is 100%.

Group of orthologs #2291. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 D.pseudoobscura:227

F6VI10              	100.00%		Q296A5              	100.00%
Bootstrap support for F6VI10 as seed ortholog is 100%.
Bootstrap support for Q296A5 as seed ortholog is 100%.

Group of orthologs #2292. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 D.pseudoobscura:164

F6RXD4              	100.00%		Q29H38              	100.00%
Bootstrap support for F6RXD4 as seed ortholog is 99%.
Bootstrap support for Q29H38 as seed ortholog is 100%.

Group of orthologs #2293. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 D.pseudoobscura:227

F6ZQX9              	100.00%		Q291B1              	100.00%
Bootstrap support for F6ZQX9 as seed ortholog is 100%.
Bootstrap support for Q291B1 as seed ortholog is 100%.

Group of orthologs #2294. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 D.pseudoobscura:227

H2XJN3              	100.00%		Q28Y94              	100.00%
Bootstrap support for H2XJN3 as seed ortholog is 100%.
Bootstrap support for Q28Y94 as seed ortholog is 100%.

Group of orthologs #2295. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 D.pseudoobscura:100

F6UNM5              	100.00%		Q2M043              	100.00%
Bootstrap support for F6UNM5 as seed ortholog is 94%.
Bootstrap support for Q2M043 as seed ortholog is 99%.

Group of orthologs #2296. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 D.pseudoobscura:227

H2XXH1              	100.00%		Q290H8              	100.00%
Bootstrap support for H2XXH1 as seed ortholog is 100%.
Bootstrap support for Q290H8 as seed ortholog is 100%.

Group of orthologs #2297. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 D.pseudoobscura:227

H2XM46              	100.00%		Q29FV6              	100.00%
Bootstrap support for H2XM46 as seed ortholog is 100%.
Bootstrap support for Q29FV6 as seed ortholog is 100%.

Group of orthologs #2298. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 D.pseudoobscura:227

F7ASI0              	100.00%		Q29LN8              	100.00%
Bootstrap support for F7ASI0 as seed ortholog is 100%.
Bootstrap support for Q29LN8 as seed ortholog is 100%.

Group of orthologs #2299. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 D.pseudoobscura:227

H2Y233              	100.00%		Q293V6              	100.00%
Bootstrap support for H2Y233 as seed ortholog is 100%.
Bootstrap support for Q293V6 as seed ortholog is 100%.

Group of orthologs #2300. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 D.pseudoobscura:227

H2XR37              	100.00%		Q29PM3              	100.00%
Bootstrap support for H2XR37 as seed ortholog is 100%.
Bootstrap support for Q29PM3 as seed ortholog is 100%.

Group of orthologs #2301. Best score 227 bits
Score difference with first non-orthologous sequence - C.intestinalis:227 D.pseudoobscura:227

Q4H3T3              	100.00%		Q29DK5              	100.00%
Bootstrap support for Q4H3T3 as seed ortholog is 100%.
Bootstrap support for Q29DK5 as seed ortholog is 100%.

Group of orthologs #2302. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 D.pseudoobscura:83

F6XMP2              	100.00%		Q29BM1              	100.00%
                    	       		Q297P8              	28.88%
Bootstrap support for F6XMP2 as seed ortholog is 99%.
Bootstrap support for Q29BM1 as seed ortholog is 99%.

Group of orthologs #2303. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 D.pseudoobscura:138

F7AV37              	100.00%		B5DRZ7              	100.00%
Bootstrap support for F7AV37 as seed ortholog is 100%.
Bootstrap support for B5DRZ7 as seed ortholog is 73%.
Alternative seed ortholog is B5DYZ7 (138 bits away from this cluster)

Group of orthologs #2304. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 D.pseudoobscura:226

F6RU88              	100.00%		Q29FN2              	100.00%
Bootstrap support for F6RU88 as seed ortholog is 100%.
Bootstrap support for Q29FN2 as seed ortholog is 100%.

Group of orthologs #2305. Best score 226 bits
Score difference with first non-orthologous sequence - C.intestinalis:226 D.pseudoobscura:226

F7AFF3              	100.00%		Q29L64              	100.00%
Bootstrap support for F7AFF3 as seed ortholog is 100%.
Bootstrap support for Q29L64 as seed ortholog is 100%.

Group of orthologs #2306. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 D.pseudoobscura:53

H2Y0Z7              	100.00%		Q292Y1              	100.00%
H2XVE2              	100.00%		Q28YD8              	100.00%
H2XPY7              	100.00%		Q292U4              	100.00%
H2Y2K3              	58.63%		Q28YD1              	44.39%
                    	       		Q28YD2              	41.15%
                    	       		Q28YD7              	39.01%
                    	       		B5E048              	33.54%
                    	       		B5E049              	32.92%
                    	       		Q28YD6              	30.42%
                    	       		Q28YD4              	30.30%
                    	       		Q29B34              	29.04%
                    	       		Q28XV3              	24.79%
                    	       		Q28XA2              	24.67%
                    	       		B5DJP8              	15.90%
                    	       		Q292C5              	12.67%
                    	       		Q292C6              	12.67%
                    	       		Q29AT3              	12.30%
                    	       		Q291Q4              	12.17%
                    	       		Q28WY4              	11.47%
                    	       		Q28YD0              	11.10%
                    	       		Q298W4              	9.19%
                    	       		Q29GL1              	7.83%
                    	       		B5E1D0              	6.58%
                    	       		B5DJQ6              	5.22%
Bootstrap support for H2Y0Z7 as seed ortholog is 97%.
Bootstrap support for H2XVE2 as seed ortholog is 86%.
Bootstrap support for H2XPY7 as seed ortholog is 95%.
Bootstrap support for Q292Y1 as seed ortholog is 89%.
Bootstrap support for Q28YD8 as seed ortholog is 70%.
Alternative seed ortholog is B5DMG9 (53 bits away from this cluster)
Bootstrap support for Q292U4 as seed ortholog is 84%.

Group of orthologs #2307. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 D.pseudoobscura:81

F6R5M7              	100.00%		Q29A84              	100.00%
F6T8B2              	49.69%		
F6R6K6              	25.57%		
F6Y549              	24.12%		
L7N0U3              	14.23%		
F6VID6              	12.99%		
H2Y2Z4              	8.25%		
Bootstrap support for F6R5M7 as seed ortholog is 99%.
Bootstrap support for Q29A84 as seed ortholog is 99%.

Group of orthologs #2308. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 D.pseudoobscura:225

F6W4G9              	100.00%		Q298L3              	100.00%
                    	       		B5DWJ8              	5.81%
Bootstrap support for F6W4G9 as seed ortholog is 100%.
Bootstrap support for Q298L3 as seed ortholog is 100%.

Group of orthologs #2309. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 D.pseudoobscura:225

F6VF67              	100.00%		Q295F6              	100.00%
Bootstrap support for F6VF67 as seed ortholog is 100%.
Bootstrap support for Q295F6 as seed ortholog is 100%.

Group of orthologs #2310. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 D.pseudoobscura:137

F6Y043              	100.00%		Q28ZY2              	100.00%
Bootstrap support for F6Y043 as seed ortholog is 99%.
Bootstrap support for Q28ZY2 as seed ortholog is 99%.

Group of orthologs #2311. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 D.pseudoobscura:225

F6QGN1              	100.00%		Q29P19              	100.00%
Bootstrap support for F6QGN1 as seed ortholog is 100%.
Bootstrap support for Q29P19 as seed ortholog is 100%.

Group of orthologs #2312. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 D.pseudoobscura:225

F7A9Q6              	100.00%		Q28XE2              	100.00%
Bootstrap support for F7A9Q6 as seed ortholog is 99%.
Bootstrap support for Q28XE2 as seed ortholog is 100%.

Group of orthologs #2313. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 D.pseudoobscura:225

F7BND4              	100.00%		Q28ZI3              	100.00%
Bootstrap support for F7BND4 as seed ortholog is 100%.
Bootstrap support for Q28ZI3 as seed ortholog is 100%.

Group of orthologs #2314. Best score 225 bits
Score difference with first non-orthologous sequence - C.intestinalis:225 D.pseudoobscura:225

F6TUV6              	100.00%		Q2M0B7              	100.00%
Bootstrap support for F6TUV6 as seed ortholog is 100%.
Bootstrap support for Q2M0B7 as seed ortholog is 100%.

Group of orthologs #2315. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 D.pseudoobscura:24

F6RXW9              	100.00%		Q28WX5              	100.00%
                    	       		B5DYR7              	35.00%
                    	       		B5DHG5              	8.75%
Bootstrap support for F6RXW9 as seed ortholog is 100%.
Bootstrap support for Q28WX5 as seed ortholog is 91%.

Group of orthologs #2316. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 D.pseudoobscura:224

F6PH90              	100.00%		Q29MZ8              	100.00%
Bootstrap support for F6PH90 as seed ortholog is 100%.
Bootstrap support for Q29MZ8 as seed ortholog is 100%.

Group of orthologs #2317. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 D.pseudoobscura:224

F6VA08              	100.00%		Q29BZ1              	100.00%
Bootstrap support for F6VA08 as seed ortholog is 100%.
Bootstrap support for Q29BZ1 as seed ortholog is 100%.

Group of orthologs #2318. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 D.pseudoobscura:224

F6YUM3              	100.00%		Q29DI4              	100.00%
Bootstrap support for F6YUM3 as seed ortholog is 100%.
Bootstrap support for Q29DI4 as seed ortholog is 100%.

Group of orthologs #2319. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 D.pseudoobscura:224

H2XLZ0              	100.00%		Q29EH0              	100.00%
Bootstrap support for H2XLZ0 as seed ortholog is 99%.
Bootstrap support for Q29EH0 as seed ortholog is 100%.

Group of orthologs #2320. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 D.pseudoobscura:224

H2XSL2              	100.00%		Q29J56              	100.00%
Bootstrap support for H2XSL2 as seed ortholog is 100%.
Bootstrap support for Q29J56 as seed ortholog is 100%.

Group of orthologs #2321. Best score 224 bits
Score difference with first non-orthologous sequence - C.intestinalis:224 D.pseudoobscura:137

H2XVN4              	100.00%		Q29LH3              	100.00%
Bootstrap support for H2XVN4 as seed ortholog is 100%.
Bootstrap support for Q29LH3 as seed ortholog is 99%.

Group of orthologs #2322. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 D.pseudoobscura:223

F7BBQ5              	100.00%		B5DW72              	100.00%
F6YB01              	23.01%		
Bootstrap support for F7BBQ5 as seed ortholog is 100%.
Bootstrap support for B5DW72 as seed ortholog is 100%.

Group of orthologs #2323. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 D.pseudoobscura:18

H2XPI4              	100.00%		B5DPW2              	100.00%
F6S5C8              	96.67%		
Bootstrap support for H2XPI4 as seed ortholog is 100%.
Bootstrap support for B5DPW2 as seed ortholog is 83%.

Group of orthologs #2324. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 D.pseudoobscura:223

F6R192              	100.00%		B5DI01              	100.00%
Bootstrap support for F6R192 as seed ortholog is 100%.
Bootstrap support for B5DI01 as seed ortholog is 100%.

Group of orthologs #2325. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 D.pseudoobscura:223

F6S4X9              	100.00%		Q290A9              	100.00%
Bootstrap support for F6S4X9 as seed ortholog is 100%.
Bootstrap support for Q290A9 as seed ortholog is 100%.

Group of orthologs #2326. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 D.pseudoobscura:223

F6X915              	100.00%		Q28ZB3              	100.00%
Bootstrap support for F6X915 as seed ortholog is 100%.
Bootstrap support for Q28ZB3 as seed ortholog is 100%.

Group of orthologs #2327. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 D.pseudoobscura:129

F6U441              	100.00%		Q2M030              	100.00%
Bootstrap support for F6U441 as seed ortholog is 100%.
Bootstrap support for Q2M030 as seed ortholog is 99%.

Group of orthologs #2328. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 D.pseudoobscura:223

F6ZQ39              	100.00%		Q29IC7              	100.00%
Bootstrap support for F6ZQ39 as seed ortholog is 100%.
Bootstrap support for Q29IC7 as seed ortholog is 100%.

Group of orthologs #2329. Best score 223 bits
Score difference with first non-orthologous sequence - C.intestinalis:223 D.pseudoobscura:22

H2XX55              	100.00%		Q29HG0              	100.00%
Bootstrap support for H2XX55 as seed ortholog is 100%.
Bootstrap support for Q29HG0 as seed ortholog is 74%.
Alternative seed ortholog is Q28WV5 (22 bits away from this cluster)

Group of orthologs #2330. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 D.pseudoobscura:222

F6WTW2              	100.00%		B5DWK6              	100.00%
                    	       		B5DWK5              	31.79%
                    	       		B5DK78              	21.19%
                    	       		B5DVC8              	10.16%
Bootstrap support for F6WTW2 as seed ortholog is 100%.
Bootstrap support for B5DWK6 as seed ortholog is 100%.

Group of orthologs #2331. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 D.pseudoobscura:222

H2XKH3              	100.00%		Q291N4              	100.00%
                    	       		B5DID4              	37.28%
                    	       		B5DY97              	29.77%
Bootstrap support for H2XKH3 as seed ortholog is 100%.
Bootstrap support for Q291N4 as seed ortholog is 100%.

Group of orthologs #2332. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 D.pseudoobscura:222

F6TMZ9              	100.00%		B5DH77              	100.00%
                    	       		Q29MF1              	32.16%
Bootstrap support for F6TMZ9 as seed ortholog is 62%.
Alternative seed ortholog is F6ZTD1 (20 bits away from this cluster)
Bootstrap support for B5DH77 as seed ortholog is 100%.

Group of orthologs #2333. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 D.pseudoobscura:222

F6T6F5              	100.00%		B5DXG9              	100.00%
                    	       		B5DM19              	21.13%
Bootstrap support for F6T6F5 as seed ortholog is 100%.
Bootstrap support for B5DXG9 as seed ortholog is 100%.

Group of orthologs #2334. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 D.pseudoobscura:37

F6Y1X1              	100.00%		Q292L3              	100.00%
                    	       		Q2M055              	7.94%
Bootstrap support for F6Y1X1 as seed ortholog is 100%.
Bootstrap support for Q292L3 as seed ortholog is 83%.

Group of orthologs #2335. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 D.pseudoobscura:52

F7BLL2              	100.00%		I5AMZ0              	100.00%
                    	       		I5AN79              	6.61%
Bootstrap support for F7BLL2 as seed ortholog is 66%.
Alternative seed ortholog is F6QF27 (48 bits away from this cluster)
Bootstrap support for I5AMZ0 as seed ortholog is 85%.

Group of orthologs #2336. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 D.pseudoobscura:222

H2XSB5              	100.00%		Q29JC9              	100.00%
                    	       		Q2M172              	31.62%
Bootstrap support for H2XSB5 as seed ortholog is 100%.
Bootstrap support for Q29JC9 as seed ortholog is 100%.

Group of orthologs #2337. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 D.pseudoobscura:222

F6RZ52              	100.00%		Q29BI8              	100.00%
Bootstrap support for F6RZ52 as seed ortholog is 100%.
Bootstrap support for Q29BI8 as seed ortholog is 100%.

Group of orthologs #2338. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 D.pseudoobscura:222

F6X0R0              	100.00%		Q290P6              	100.00%
Bootstrap support for F6X0R0 as seed ortholog is 100%.
Bootstrap support for Q290P6 as seed ortholog is 100%.

Group of orthologs #2339. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 D.pseudoobscura:222

H2XQ24              	100.00%		B5DPX3              	100.00%
Bootstrap support for H2XQ24 as seed ortholog is 90%.
Bootstrap support for B5DPX3 as seed ortholog is 100%.

Group of orthologs #2340. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 D.pseudoobscura:222

F6UIW1              	100.00%		Q29HV4              	100.00%
Bootstrap support for F6UIW1 as seed ortholog is 100%.
Bootstrap support for Q29HV4 as seed ortholog is 100%.

Group of orthologs #2341. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 D.pseudoobscura:140

F6SN27              	100.00%		Q2LZ79              	100.00%
Bootstrap support for F6SN27 as seed ortholog is 100%.
Bootstrap support for Q2LZ79 as seed ortholog is 99%.

Group of orthologs #2342. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 D.pseudoobscura:222

F6WCB0              	100.00%		Q29M94              	100.00%
Bootstrap support for F6WCB0 as seed ortholog is 100%.
Bootstrap support for Q29M94 as seed ortholog is 100%.

Group of orthologs #2343. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 D.pseudoobscura:222

F7APD9              	100.00%		Q29GU7              	100.00%
Bootstrap support for F7APD9 as seed ortholog is 100%.
Bootstrap support for Q29GU7 as seed ortholog is 100%.

Group of orthologs #2344. Best score 222 bits
Score difference with first non-orthologous sequence - C.intestinalis:222 D.pseudoobscura:222

Q8HIM8              	100.00%		D2SXZ4              	100.00%
Bootstrap support for Q8HIM8 as seed ortholog is 100%.
Bootstrap support for D2SXZ4 as seed ortholog is 100%.

Group of orthologs #2345. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:39

F6UTG5              	100.00%		B5DLB9              	100.00%
Bootstrap support for F6UTG5 as seed ortholog is 100%.
Bootstrap support for B5DLB9 as seed ortholog is 99%.

Group of orthologs #2346. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 D.pseudoobscura:221

F6UUL4              	100.00%		Q296L6              	100.00%
Bootstrap support for F6UUL4 as seed ortholog is 100%.
Bootstrap support for Q296L6 as seed ortholog is 100%.

Group of orthologs #2347. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 D.pseudoobscura:221

F6SPY1              	100.00%		Q29E38              	100.00%
Bootstrap support for F6SPY1 as seed ortholog is 100%.
Bootstrap support for Q29E38 as seed ortholog is 100%.

Group of orthologs #2348. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:4 D.pseudoobscura:21

F6W1X7              	100.00%		Q29A90              	100.00%
Bootstrap support for F6W1X7 as seed ortholog is 55%.
Alternative seed ortholog is F6Z9B3 (4 bits away from this cluster)
Bootstrap support for Q29A90 as seed ortholog is 76%.

Group of orthologs #2349. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 D.pseudoobscura:221

F6QND3              	100.00%		Q29NT4              	100.00%
Bootstrap support for F6QND3 as seed ortholog is 100%.
Bootstrap support for Q29NT4 as seed ortholog is 100%.

Group of orthologs #2350. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 D.pseudoobscura:221

F6V437              	100.00%		Q29IA5              	100.00%
Bootstrap support for F6V437 as seed ortholog is 100%.
Bootstrap support for Q29IA5 as seed ortholog is 100%.

Group of orthologs #2351. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 D.pseudoobscura:221

F6Y978              	100.00%		Q29DU0              	100.00%
Bootstrap support for F6Y978 as seed ortholog is 100%.
Bootstrap support for Q29DU0 as seed ortholog is 100%.

Group of orthologs #2352. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 D.pseudoobscura:221

F6ULS9              	100.00%		Q8I1C8              	100.00%
Bootstrap support for F6ULS9 as seed ortholog is 100%.
Bootstrap support for Q8I1C8 as seed ortholog is 100%.

Group of orthologs #2353. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 D.pseudoobscura:221

F6ZYE8              	100.00%		Q29FC1              	100.00%
Bootstrap support for F6ZYE8 as seed ortholog is 100%.
Bootstrap support for Q29FC1 as seed ortholog is 100%.

Group of orthologs #2354. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 D.pseudoobscura:221

Q8HIN0              	100.00%		D2SXZ5              	100.00%
Bootstrap support for Q8HIN0 as seed ortholog is 100%.
Bootstrap support for D2SXZ5 as seed ortholog is 100%.

Group of orthologs #2355. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:221 D.pseudoobscura:221

Q8HIN2              	100.00%		D2SXZ9              	100.00%
Bootstrap support for Q8HIN2 as seed ortholog is 100%.
Bootstrap support for D2SXZ9 as seed ortholog is 100%.

Group of orthologs #2356. Best score 221 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:164

Q4H3E0              	100.00%		Q29GJ1              	100.00%
Bootstrap support for Q4H3E0 as seed ortholog is 100%.
Bootstrap support for Q29GJ1 as seed ortholog is 100%.

Group of orthologs #2357. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 D.pseudoobscura:30

F7AK90              	100.00%		Q290Q5              	100.00%
F7BHT5              	100.00%		Q292X2              	100.00%
                    	       		B5E1C3              	18.35%
Bootstrap support for F7AK90 as seed ortholog is 97%.
Bootstrap support for F7BHT5 as seed ortholog is 97%.
Bootstrap support for Q290Q5 as seed ortholog is 81%.
Bootstrap support for Q292X2 as seed ortholog is 66%.
Alternative seed ortholog is Q296H9 (30 bits away from this cluster)

Group of orthologs #2358. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 D.pseudoobscura:158

F6XSD8              	100.00%		B5DXW0              	100.00%
H2XPB7              	57.28%		Q299P3              	27.13%
Bootstrap support for F6XSD8 as seed ortholog is 100%.
Bootstrap support for B5DXW0 as seed ortholog is 100%.

Group of orthologs #2359. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 D.pseudoobscura:69

F6ULU6              	100.00%		Q296V0              	100.00%
H2XZ40              	28.40%		
F7AP79              	10.20%		
Bootstrap support for F6ULU6 as seed ortholog is 100%.
Bootstrap support for Q296V0 as seed ortholog is 95%.

Group of orthologs #2360. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 D.pseudoobscura:151

F6T4J3              	100.00%		B5DKM5              	100.00%
                    	       		B5DJM4              	28.54%
Bootstrap support for F6T4J3 as seed ortholog is 99%.
Bootstrap support for B5DKM5 as seed ortholog is 99%.

Group of orthologs #2361. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 D.pseudoobscura:220

F6VVA7              	100.00%		Q29D99              	100.00%
                    	       		Q292S5              	5.67%
Bootstrap support for F6VVA7 as seed ortholog is 100%.
Bootstrap support for Q29D99 as seed ortholog is 100%.

Group of orthologs #2362. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:29

F6RN78              	100.00%		Q28XF1              	100.00%
Bootstrap support for F6RN78 as seed ortholog is 100%.
Bootstrap support for Q28XF1 as seed ortholog is 88%.

Group of orthologs #2363. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 D.pseudoobscura:220

F6ZT40              	100.00%		B5DN33              	100.00%
Bootstrap support for F6ZT40 as seed ortholog is 100%.
Bootstrap support for B5DN33 as seed ortholog is 100%.

Group of orthologs #2364. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 D.pseudoobscura:220

F6X9U7              	100.00%		Q29AU5              	100.00%
Bootstrap support for F6X9U7 as seed ortholog is 100%.
Bootstrap support for Q29AU5 as seed ortholog is 100%.

Group of orthologs #2365. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 D.pseudoobscura:220

F6ZGT8              	100.00%		Q29AQ9              	100.00%
Bootstrap support for F6ZGT8 as seed ortholog is 100%.
Bootstrap support for Q29AQ9 as seed ortholog is 100%.

Group of orthologs #2366. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 D.pseudoobscura:220

F6YJB7              	100.00%		Q29I43              	100.00%
Bootstrap support for F6YJB7 as seed ortholog is 100%.
Bootstrap support for Q29I43 as seed ortholog is 100%.

Group of orthologs #2367. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 D.pseudoobscura:220

H2XXK6              	100.00%		Q28X35              	100.00%
Bootstrap support for H2XXK6 as seed ortholog is 100%.
Bootstrap support for Q28X35 as seed ortholog is 100%.

Group of orthologs #2368. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 D.pseudoobscura:124

F7BA12              	100.00%		Q29JX9              	100.00%
Bootstrap support for F7BA12 as seed ortholog is 84%.
Bootstrap support for Q29JX9 as seed ortholog is 100%.

Group of orthologs #2369. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 D.pseudoobscura:220

H2XUL2              	100.00%		Q29CU6              	100.00%
Bootstrap support for H2XUL2 as seed ortholog is 99%.
Bootstrap support for Q29CU6 as seed ortholog is 100%.

Group of orthologs #2370. Best score 220 bits
Score difference with first non-orthologous sequence - C.intestinalis:220 D.pseudoobscura:220

Q68A32              	100.00%		Q29FN4              	100.00%
Bootstrap support for Q68A32 as seed ortholog is 100%.
Bootstrap support for Q29FN4 as seed ortholog is 100%.

Group of orthologs #2371. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 D.pseudoobscura:219

F6VVK4              	100.00%		Q28WY9              	100.00%
F6PS87              	32.68%		
F6VVP4              	32.30%		
F7BMK2              	13.75%		
H2XQL2              	7.70%		
F6YGU3              	5.43%		
Bootstrap support for F6VVK4 as seed ortholog is 73%.
Alternative seed ortholog is F6ZM33 (32 bits away from this cluster)
Bootstrap support for Q28WY9 as seed ortholog is 100%.

Group of orthologs #2372. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 D.pseudoobscura:219

F6VQB3              	100.00%		Q29KQ6              	100.00%
H2XML0              	8.77%		
Bootstrap support for F6VQB3 as seed ortholog is 100%.
Bootstrap support for Q29KQ6 as seed ortholog is 100%.

Group of orthologs #2373. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 D.pseudoobscura:48

H2XP52              	100.00%		Q2M1D5              	100.00%
F6QZM4              	25.59%		
Bootstrap support for H2XP52 as seed ortholog is 100%.
Bootstrap support for Q2M1D5 as seed ortholog is 98%.

Group of orthologs #2374. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 D.pseudoobscura:219

F6YGG6              	100.00%		Q291F7              	100.00%
Bootstrap support for F6YGG6 as seed ortholog is 100%.
Bootstrap support for Q291F7 as seed ortholog is 100%.

Group of orthologs #2375. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 D.pseudoobscura:219

F7B2L3              	100.00%		Q291U5              	100.00%
Bootstrap support for F7B2L3 as seed ortholog is 100%.
Bootstrap support for Q291U5 as seed ortholog is 100%.

Group of orthologs #2376. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 D.pseudoobscura:219

F6WLK6              	100.00%		Q29H94              	100.00%
Bootstrap support for F6WLK6 as seed ortholog is 100%.
Bootstrap support for Q29H94 as seed ortholog is 100%.

Group of orthologs #2377. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 D.pseudoobscura:219

F6Y089              	100.00%		Q29L15              	100.00%
Bootstrap support for F6Y089 as seed ortholog is 100%.
Bootstrap support for Q29L15 as seed ortholog is 100%.

Group of orthologs #2378. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 D.pseudoobscura:219

F6YUN5              	100.00%		Q29JI5              	100.00%
Bootstrap support for F6YUN5 as seed ortholog is 100%.
Bootstrap support for Q29JI5 as seed ortholog is 100%.

Group of orthologs #2379. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 D.pseudoobscura:219

H2Y1H7              	100.00%		B5DWD6              	100.00%
Bootstrap support for H2Y1H7 as seed ortholog is 100%.
Bootstrap support for B5DWD6 as seed ortholog is 100%.

Group of orthologs #2380. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 D.pseudoobscura:219

H2XP26              	100.00%		Q295Q0              	100.00%
Bootstrap support for H2XP26 as seed ortholog is 100%.
Bootstrap support for Q295Q0 as seed ortholog is 100%.

Group of orthologs #2381. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 D.pseudoobscura:219

F6ZSN0              	100.00%		Q29NS0              	100.00%
Bootstrap support for F6ZSN0 as seed ortholog is 100%.
Bootstrap support for Q29NS0 as seed ortholog is 100%.

Group of orthologs #2382. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 D.pseudoobscura:219

F7B496              	100.00%		Q2M0Y3              	100.00%
Bootstrap support for F7B496 as seed ortholog is 100%.
Bootstrap support for Q2M0Y3 as seed ortholog is 100%.

Group of orthologs #2383. Best score 219 bits
Score difference with first non-orthologous sequence - C.intestinalis:219 D.pseudoobscura:219

Q4H2I7              	100.00%		Q29MU1              	100.00%
Bootstrap support for Q4H2I7 as seed ortholog is 100%.
Bootstrap support for Q29MU1 as seed ortholog is 100%.

Group of orthologs #2384. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 D.pseudoobscura:104

F6XS17              	100.00%		Q29DC5              	100.00%
                    	       		Q2LZ51              	10.36%
                    	       		Q29E61              	5.18%
Bootstrap support for F6XS17 as seed ortholog is 100%.
Bootstrap support for Q29DC5 as seed ortholog is 99%.

Group of orthologs #2385. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 D.pseudoobscura:218

F6RQZ5              	100.00%		Q2LZ62              	100.00%
                    	       		Q29IL2              	5.54%
Bootstrap support for F6RQZ5 as seed ortholog is 100%.
Bootstrap support for Q2LZ62 as seed ortholog is 100%.

Group of orthologs #2386. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 D.pseudoobscura:218

F6SEF1              	100.00%		Q293R4              	100.00%
Bootstrap support for F6SEF1 as seed ortholog is 100%.
Bootstrap support for Q293R4 as seed ortholog is 100%.

Group of orthologs #2387. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 D.pseudoobscura:218

F6U8Q9              	100.00%		Q290T7              	100.00%
Bootstrap support for F6U8Q9 as seed ortholog is 100%.
Bootstrap support for Q290T7 as seed ortholog is 100%.

Group of orthologs #2388. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 D.pseudoobscura:218

F6QE62              	100.00%		Q29L20              	100.00%
Bootstrap support for F6QE62 as seed ortholog is 100%.
Bootstrap support for Q29L20 as seed ortholog is 100%.

Group of orthologs #2389. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 D.pseudoobscura:68

F6SWC9              	100.00%		Q29H54              	100.00%
Bootstrap support for F6SWC9 as seed ortholog is 80%.
Bootstrap support for Q29H54 as seed ortholog is 98%.

Group of orthologs #2390. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 D.pseudoobscura:152

F6Y9U9              	100.00%		Q292Q1              	100.00%
Bootstrap support for F6Y9U9 as seed ortholog is 99%.
Bootstrap support for Q292Q1 as seed ortholog is 100%.

Group of orthologs #2391. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 D.pseudoobscura:218

F6XVG4              	100.00%		Q29DD5              	100.00%
Bootstrap support for F6XVG4 as seed ortholog is 100%.
Bootstrap support for Q29DD5 as seed ortholog is 100%.

Group of orthologs #2392. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 D.pseudoobscura:134

F6W510              	100.00%		Q29HG8              	100.00%
Bootstrap support for F6W510 as seed ortholog is 100%.
Bootstrap support for Q29HG8 as seed ortholog is 99%.

Group of orthologs #2393. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 D.pseudoobscura:218

F7BKM3              	100.00%		Q29EV4              	100.00%
Bootstrap support for F7BKM3 as seed ortholog is 100%.
Bootstrap support for Q29EV4 as seed ortholog is 100%.

Group of orthologs #2394. Best score 218 bits
Score difference with first non-orthologous sequence - C.intestinalis:218 D.pseudoobscura:218

H2XY13              	100.00%		Q2LYT2              	100.00%
Bootstrap support for H2XY13 as seed ortholog is 100%.
Bootstrap support for Q2LYT2 as seed ortholog is 100%.

Group of orthologs #2395. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 D.pseudoobscura:217

F6YIB7              	100.00%		Q29H30              	100.00%
                    	       		Q29E36              	24.36%
Bootstrap support for F6YIB7 as seed ortholog is 96%.
Bootstrap support for Q29H30 as seed ortholog is 100%.

Group of orthologs #2396. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:217

Q9NL28              	100.00%		B5DS31              	100.00%
                    	       		Q29H90              	25.62%
Bootstrap support for Q9NL28 as seed ortholog is 99%.
Bootstrap support for B5DS31 as seed ortholog is 100%.

Group of orthologs #2397. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 D.pseudoobscura:217

F6T1X5              	100.00%		Q292E3              	100.00%
Bootstrap support for F6T1X5 as seed ortholog is 100%.
Bootstrap support for Q292E3 as seed ortholog is 100%.

Group of orthologs #2398. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 D.pseudoobscura:217

F6VMC6              	100.00%		Q291J3              	100.00%
Bootstrap support for F6VMC6 as seed ortholog is 100%.
Bootstrap support for Q291J3 as seed ortholog is 100%.

Group of orthologs #2399. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 D.pseudoobscura:217

F6T1Y9              	100.00%		Q29JE8              	100.00%
Bootstrap support for F6T1Y9 as seed ortholog is 100%.
Bootstrap support for Q29JE8 as seed ortholog is 100%.

Group of orthologs #2400. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 D.pseudoobscura:217

F6XNX8              	100.00%		Q29F38              	100.00%
Bootstrap support for F6XNX8 as seed ortholog is 100%.
Bootstrap support for Q29F38 as seed ortholog is 100%.

Group of orthologs #2401. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 D.pseudoobscura:217

F7ASZ2              	100.00%		Q295E5              	100.00%
Bootstrap support for F7ASZ2 as seed ortholog is 100%.
Bootstrap support for Q295E5 as seed ortholog is 100%.

Group of orthologs #2402. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 D.pseudoobscura:217

F6V1A9              	100.00%		Q29NU8              	100.00%
Bootstrap support for F6V1A9 as seed ortholog is 100%.
Bootstrap support for Q29NU8 as seed ortholog is 100%.

Group of orthologs #2403. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 D.pseudoobscura:217

F6YI25              	100.00%		Q29NK7              	100.00%
Bootstrap support for F6YI25 as seed ortholog is 100%.
Bootstrap support for Q29NK7 as seed ortholog is 100%.

Group of orthologs #2404. Best score 217 bits
Score difference with first non-orthologous sequence - C.intestinalis:217 D.pseudoobscura:109

H2Y2X7              	100.00%		Q291P4              	100.00%
Bootstrap support for H2Y2X7 as seed ortholog is 100%.
Bootstrap support for Q291P4 as seed ortholog is 99%.

Group of orthologs #2405. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 D.pseudoobscura:117

F7B3M4              	100.00%		Q296J4              	100.00%
                    	       		B5DXP5              	28.87%
Bootstrap support for F7B3M4 as seed ortholog is 100%.
Bootstrap support for Q296J4 as seed ortholog is 99%.

Group of orthologs #2406. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 D.pseudoobscura:74

F7AHE1              	100.00%		B5DLM6              	100.00%
Bootstrap support for F7AHE1 as seed ortholog is 99%.
Bootstrap support for B5DLM6 as seed ortholog is 99%.

Group of orthologs #2407. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 D.pseudoobscura:216

F6Y6X7              	100.00%		Q29LK5              	100.00%
Bootstrap support for F6Y6X7 as seed ortholog is 100%.
Bootstrap support for Q29LK5 as seed ortholog is 100%.

Group of orthologs #2408. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 D.pseudoobscura:216

F7ABL1              	100.00%		Q29PM7              	100.00%
Bootstrap support for F7ABL1 as seed ortholog is 100%.
Bootstrap support for Q29PM7 as seed ortholog is 100%.

Group of orthologs #2409. Best score 216 bits
Score difference with first non-orthologous sequence - C.intestinalis:216 D.pseudoobscura:216

Q4H3F7              	100.00%		Q29BA6              	100.00%
Bootstrap support for Q4H3F7 as seed ortholog is 100%.
Bootstrap support for Q29BA6 as seed ortholog is 100%.

Group of orthologs #2410. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 D.pseudoobscura:52

F6S566              	100.00%		Q29GM8              	100.00%
                    	       		Q29BJ2              	19.80%
Bootstrap support for F6S566 as seed ortholog is 97%.
Bootstrap support for Q29GM8 as seed ortholog is 90%.

Group of orthologs #2411. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 D.pseudoobscura:215

F6S7F2              	100.00%		Q28WN3              	100.00%
Bootstrap support for F6S7F2 as seed ortholog is 100%.
Bootstrap support for Q28WN3 as seed ortholog is 100%.

Group of orthologs #2412. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 D.pseudoobscura:215

F6WBK6              	100.00%		Q28WS1              	100.00%
Bootstrap support for F6WBK6 as seed ortholog is 100%.
Bootstrap support for Q28WS1 as seed ortholog is 100%.

Group of orthologs #2413. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 D.pseudoobscura:215

F6X5Q9              	100.00%		Q28YX2              	100.00%
Bootstrap support for F6X5Q9 as seed ortholog is 100%.
Bootstrap support for Q28YX2 as seed ortholog is 100%.

Group of orthologs #2414. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 D.pseudoobscura:215

F6ZFI0              	100.00%		Q293U2              	100.00%
Bootstrap support for F6ZFI0 as seed ortholog is 100%.
Bootstrap support for Q293U2 as seed ortholog is 100%.

Group of orthologs #2415. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 D.pseudoobscura:215

F7BI62              	100.00%		Q28YM8              	100.00%
Bootstrap support for F7BI62 as seed ortholog is 100%.
Bootstrap support for Q28YM8 as seed ortholog is 100%.

Group of orthologs #2416. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 D.pseudoobscura:215

F6Z0L7              	100.00%		Q29C20              	100.00%
Bootstrap support for F6Z0L7 as seed ortholog is 100%.
Bootstrap support for Q29C20 as seed ortholog is 100%.

Group of orthologs #2417. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 D.pseudoobscura:215

F6YAD0              	100.00%		Q29FP6              	100.00%
Bootstrap support for F6YAD0 as seed ortholog is 100%.
Bootstrap support for Q29FP6 as seed ortholog is 100%.

Group of orthologs #2418. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 D.pseudoobscura:215

F7AE51              	100.00%		Q29B17              	100.00%
Bootstrap support for F7AE51 as seed ortholog is 100%.
Bootstrap support for Q29B17 as seed ortholog is 100%.

Group of orthologs #2419. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 D.pseudoobscura:215

H2XNJ5              	100.00%		Q29HR2              	100.00%
Bootstrap support for H2XNJ5 as seed ortholog is 100%.
Bootstrap support for Q29HR2 as seed ortholog is 100%.

Group of orthologs #2420. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 D.pseudoobscura:215

H2XS72              	100.00%		Q29LH4              	100.00%
Bootstrap support for H2XS72 as seed ortholog is 100%.
Bootstrap support for Q29LH4 as seed ortholog is 100%.

Group of orthologs #2421. Best score 215 bits
Score difference with first non-orthologous sequence - C.intestinalis:215 D.pseudoobscura:215

Q4H389              	100.00%		Q2M0Q7              	100.00%
Bootstrap support for Q4H389 as seed ortholog is 100%.
Bootstrap support for Q2M0Q7 as seed ortholog is 100%.

Group of orthologs #2422. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 D.pseudoobscura:80

H2XS07              	100.00%		Q299N1              	100.00%
H2XXY1              	100.00%		
F6U667              	20.82%		
Bootstrap support for H2XS07 as seed ortholog is 90%.
Bootstrap support for H2XXY1 as seed ortholog is 91%.
Bootstrap support for Q299N1 as seed ortholog is 99%.

Group of orthologs #2423. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 D.pseudoobscura:214

F6QBK7              	100.00%		Q28XK6              	100.00%
Bootstrap support for F6QBK7 as seed ortholog is 100%.
Bootstrap support for Q28XK6 as seed ortholog is 100%.

Group of orthologs #2424. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 D.pseudoobscura:214

F6V9A1              	100.00%		Q292D0              	100.00%
Bootstrap support for F6V9A1 as seed ortholog is 100%.
Bootstrap support for Q292D0 as seed ortholog is 100%.

Group of orthologs #2425. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 D.pseudoobscura:214

F6SSS9              	100.00%		Q29B04              	100.00%
Bootstrap support for F6SSS9 as seed ortholog is 100%.
Bootstrap support for Q29B04 as seed ortholog is 100%.

Group of orthologs #2426. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 D.pseudoobscura:214

F6UA18              	100.00%		Q297I9              	100.00%
Bootstrap support for F6UA18 as seed ortholog is 100%.
Bootstrap support for Q297I9 as seed ortholog is 100%.

Group of orthologs #2427. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 D.pseudoobscura:71

F6XTZ6              	100.00%		Q28X82              	100.00%
Bootstrap support for F6XTZ6 as seed ortholog is 100%.
Bootstrap support for Q28X82 as seed ortholog is 98%.

Group of orthologs #2428. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 D.pseudoobscura:98

F6VPC4              	100.00%		Q29CB6              	100.00%
Bootstrap support for F6VPC4 as seed ortholog is 99%.
Bootstrap support for Q29CB6 as seed ortholog is 99%.

Group of orthologs #2429. Best score 214 bits
Score difference with first non-orthologous sequence - C.intestinalis:214 D.pseudoobscura:214

F7A4X2              	100.00%		Q28YJ4              	100.00%
Bootstrap support for F7A4X2 as seed ortholog is 100%.
Bootstrap support for Q28YJ4 as seed ortholog is 100%.

Group of orthologs #2430. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:49

F6Y8L3              	100.00%		B5DKQ8              	100.00%
F7BE27              	31.31%		
Bootstrap support for F6Y8L3 as seed ortholog is 100%.
Bootstrap support for B5DKQ8 as seed ortholog is 89%.

Group of orthologs #2431. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:213

F6TV83              	100.00%		Q29H22              	100.00%
F6SFE9              	8.62%		
Bootstrap support for F6TV83 as seed ortholog is 100%.
Bootstrap support for Q29H22 as seed ortholog is 100%.

Group of orthologs #2432. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:213

F6YRR0              	100.00%		Q297M7              	100.00%
                    	       		B5DUE5              	21.61%
Bootstrap support for F6YRR0 as seed ortholog is 100%.
Bootstrap support for Q297M7 as seed ortholog is 100%.

Group of orthologs #2433. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:213

F6U088              	100.00%		B5DN27              	100.00%
Bootstrap support for F6U088 as seed ortholog is 100%.
Bootstrap support for B5DN27 as seed ortholog is 100%.

Group of orthologs #2434. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 D.pseudoobscura:213

F6R1Q7              	100.00%		Q28XK2              	100.00%
Bootstrap support for F6R1Q7 as seed ortholog is 100%.
Bootstrap support for Q28XK2 as seed ortholog is 100%.

Group of orthologs #2435. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:213

F6R035              	100.00%		Q290Q3              	100.00%
Bootstrap support for F6R035 as seed ortholog is 100%.
Bootstrap support for Q290Q3 as seed ortholog is 100%.

Group of orthologs #2436. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:213

H2XUA5              	100.00%		B5DHP0              	100.00%
Bootstrap support for H2XUA5 as seed ortholog is 100%.
Bootstrap support for B5DHP0 as seed ortholog is 100%.

Group of orthologs #2437. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:213

F6YBU7              	100.00%		Q296K1              	100.00%
Bootstrap support for F6YBU7 as seed ortholog is 100%.
Bootstrap support for Q296K1 as seed ortholog is 100%.

Group of orthologs #2438. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:213

F6Z8N3              	100.00%		Q29B23              	100.00%
Bootstrap support for F6Z8N3 as seed ortholog is 100%.
Bootstrap support for Q29B23 as seed ortholog is 100%.

Group of orthologs #2439. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:213

F6ZH30              	100.00%		Q29NE0              	100.00%
Bootstrap support for F6ZH30 as seed ortholog is 100%.
Bootstrap support for Q29NE0 as seed ortholog is 100%.

Group of orthologs #2440. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:213

F6ZPY0              	100.00%		Q29P50              	100.00%
Bootstrap support for F6ZPY0 as seed ortholog is 100%.
Bootstrap support for Q29P50 as seed ortholog is 100%.

Group of orthologs #2441. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:213

H2XM43              	100.00%		Q29IF9              	100.00%
Bootstrap support for H2XM43 as seed ortholog is 100%.
Bootstrap support for Q29IF9 as seed ortholog is 100%.

Group of orthologs #2442. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:213

F7APT3              	100.00%		Q29P63              	100.00%
Bootstrap support for F7APT3 as seed ortholog is 100%.
Bootstrap support for Q29P63 as seed ortholog is 100%.

Group of orthologs #2443. Best score 213 bits
Score difference with first non-orthologous sequence - C.intestinalis:213 D.pseudoobscura:46

F7BJZ5              	100.00%		Q29NC3              	100.00%
Bootstrap support for F7BJZ5 as seed ortholog is 100%.
Bootstrap support for Q29NC3 as seed ortholog is 90%.

Group of orthologs #2444. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 D.pseudoobscura:89

F6Q7P2              	100.00%		Q2LZ18              	100.00%
                    	       		Q29E41              	6.50%
Bootstrap support for F6Q7P2 as seed ortholog is 100%.
Bootstrap support for Q2LZ18 as seed ortholog is 99%.

Group of orthologs #2445. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 D.pseudoobscura:212

H2Y0L1              	100.00%		Q29AU6              	100.00%
                    	       		B5DVZ2              	24.10%
Bootstrap support for H2Y0L1 as seed ortholog is 100%.
Bootstrap support for Q29AU6 as seed ortholog is 100%.

Group of orthologs #2446. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 D.pseudoobscura:110

F6PZV6              	100.00%		Q290Y9              	100.00%
Bootstrap support for F6PZV6 as seed ortholog is 100%.
Bootstrap support for Q290Y9 as seed ortholog is 98%.

Group of orthologs #2447. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 D.pseudoobscura:212

F6THX7              	100.00%		Q291T0              	100.00%
Bootstrap support for F6THX7 as seed ortholog is 100%.
Bootstrap support for Q291T0 as seed ortholog is 100%.

Group of orthologs #2448. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 D.pseudoobscura:212

F6PZ15              	100.00%		Q29E49              	100.00%
Bootstrap support for F6PZ15 as seed ortholog is 100%.
Bootstrap support for Q29E49 as seed ortholog is 100%.

Group of orthologs #2449. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 D.pseudoobscura:160

F6TCF8              	100.00%		Q29I28              	100.00%
Bootstrap support for F6TCF8 as seed ortholog is 100%.
Bootstrap support for Q29I28 as seed ortholog is 100%.

Group of orthologs #2450. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 D.pseudoobscura:212

F6X5U2              	100.00%		Q29HA9              	100.00%
Bootstrap support for F6X5U2 as seed ortholog is 99%.
Bootstrap support for Q29HA9 as seed ortholog is 100%.

Group of orthologs #2451. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 D.pseudoobscura:212

F6WJZ0              	100.00%		Q29IZ1              	100.00%
Bootstrap support for F6WJZ0 as seed ortholog is 100%.
Bootstrap support for Q29IZ1 as seed ortholog is 100%.

Group of orthologs #2452. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 D.pseudoobscura:212

F6V3T4              	100.00%		Q29NR0              	100.00%
Bootstrap support for F6V3T4 as seed ortholog is 100%.
Bootstrap support for Q29NR0 as seed ortholog is 100%.

Group of orthologs #2453. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:104

F6ZTS6              	100.00%		Q29IU0              	100.00%
Bootstrap support for F6ZTS6 as seed ortholog is 99%.
Bootstrap support for Q29IU0 as seed ortholog is 99%.

Group of orthologs #2454. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:212 D.pseudoobscura:212

H2XNT5              	100.00%		Q298R0              	100.00%
Bootstrap support for H2XNT5 as seed ortholog is 100%.
Bootstrap support for Q298R0 as seed ortholog is 100%.

Group of orthologs #2455. Best score 212 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 D.pseudoobscura:212

F7A9X0              	100.00%		Q2LYW8              	100.00%
Bootstrap support for F7A9X0 as seed ortholog is 100%.
Bootstrap support for Q2LYW8 as seed ortholog is 100%.

Group of orthologs #2456. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 D.pseudoobscura:37

F7AEF7              	100.00%		Q291H8              	100.00%
                    	       		B5DZN2              	19.71%
                    	       		B5DQ85              	8.31%
                    	       		I5AP16              	6.79%
                    	       		B5E1J6              	6.00%
                    	       		Q28ZD8              	5.80%
                    	       		Q28Z33              	5.67%
Bootstrap support for F7AEF7 as seed ortholog is 97%.
Bootstrap support for Q291H8 as seed ortholog is 80%.

Group of orthologs #2457. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:103

F6XGK4              	100.00%		I5AP32              	100.00%
F6QZW1              	9.24%		
Bootstrap support for F6XGK4 as seed ortholog is 74%.
Alternative seed ortholog is F6TNN9 (70 bits away from this cluster)
Bootstrap support for I5AP32 as seed ortholog is 99%.

Group of orthologs #2458. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 D.pseudoobscura:211

F7BQ69              	100.00%		Q29FY6              	100.00%
                    	       		Q291H0              	6.11%
Bootstrap support for F7BQ69 as seed ortholog is 100%.
Bootstrap support for Q29FY6 as seed ortholog is 100%.

Group of orthologs #2459. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 D.pseudoobscura:211

F6VN74              	100.00%		B5DRG2              	100.00%
Bootstrap support for F6VN74 as seed ortholog is 100%.
Bootstrap support for B5DRG2 as seed ortholog is 100%.

Group of orthologs #2460. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 D.pseudoobscura:157

F7AI19              	100.00%		B5DX45              	100.00%
Bootstrap support for F7AI19 as seed ortholog is 30%.
Alternative seed ortholog is F6ZCT8 (20 bits away from this cluster)
Bootstrap support for B5DX45 as seed ortholog is 99%.

Group of orthologs #2461. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 D.pseudoobscura:211

F6SSL3              	100.00%		Q29KY9              	100.00%
Bootstrap support for F6SSL3 as seed ortholog is 100%.
Bootstrap support for Q29KY9 as seed ortholog is 100%.

Group of orthologs #2462. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 D.pseudoobscura:211

F6TN99              	100.00%		Q29KW5              	100.00%
Bootstrap support for F6TN99 as seed ortholog is 100%.
Bootstrap support for Q29KW5 as seed ortholog is 100%.

Group of orthologs #2463. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 D.pseudoobscura:211

F7ACG4              	100.00%		Q292C2              	100.00%
Bootstrap support for F7ACG4 as seed ortholog is 100%.
Bootstrap support for Q292C2 as seed ortholog is 100%.

Group of orthologs #2464. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 D.pseudoobscura:211

F6ZY58              	100.00%		Q29CX6              	100.00%
Bootstrap support for F6ZY58 as seed ortholog is 100%.
Bootstrap support for Q29CX6 as seed ortholog is 100%.

Group of orthologs #2465. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 D.pseudoobscura:53

F6WB20              	100.00%		Q29NR5              	100.00%
Bootstrap support for F6WB20 as seed ortholog is 99%.
Bootstrap support for Q29NR5 as seed ortholog is 94%.

Group of orthologs #2466. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 D.pseudoobscura:211

H2XL93              	100.00%		Q297A7              	100.00%
Bootstrap support for H2XL93 as seed ortholog is 100%.
Bootstrap support for Q297A7 as seed ortholog is 100%.

Group of orthologs #2467. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 D.pseudoobscura:211

H2XX58              	100.00%		Q28XZ3              	100.00%
Bootstrap support for H2XX58 as seed ortholog is 100%.
Bootstrap support for Q28XZ3 as seed ortholog is 100%.

Group of orthologs #2468. Best score 211 bits
Score difference with first non-orthologous sequence - C.intestinalis:211 D.pseudoobscura:211

F7BK20              	100.00%		Q2LZ32              	100.00%
Bootstrap support for F7BK20 as seed ortholog is 100%.
Bootstrap support for Q2LZ32 as seed ortholog is 100%.

Group of orthologs #2469. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 D.pseudoobscura:210

F6VKM8              	100.00%		Q296W3              	100.00%
Bootstrap support for F6VKM8 as seed ortholog is 100%.
Bootstrap support for Q296W3 as seed ortholog is 100%.

Group of orthologs #2470. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:140

F7AH68              	100.00%		Q28XJ5              	100.00%
Bootstrap support for F7AH68 as seed ortholog is 100%.
Bootstrap support for Q28XJ5 as seed ortholog is 100%.

Group of orthologs #2471. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 D.pseudoobscura:210

F6Z235              	100.00%		Q29DK7              	100.00%
Bootstrap support for F6Z235 as seed ortholog is 100%.
Bootstrap support for Q29DK7 as seed ortholog is 100%.

Group of orthologs #2472. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 D.pseudoobscura:130

F6YYU4              	100.00%		Q29NZ0              	100.00%
Bootstrap support for F6YYU4 as seed ortholog is 100%.
Bootstrap support for Q29NZ0 as seed ortholog is 99%.

Group of orthologs #2473. Best score 210 bits
Score difference with first non-orthologous sequence - C.intestinalis:210 D.pseudoobscura:210

H2Y0K3              	100.00%		Q295B1              	100.00%
Bootstrap support for H2Y0K3 as seed ortholog is 100%.
Bootstrap support for Q295B1 as seed ortholog is 100%.

Group of orthologs #2474. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 D.pseudoobscura:209

F6Q2F8              	100.00%		Q297V0              	100.00%
Bootstrap support for F6Q2F8 as seed ortholog is 100%.
Bootstrap support for Q297V0 as seed ortholog is 100%.

Group of orthologs #2475. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 D.pseudoobscura:209

F7AEP2              	100.00%		B5DR31              	100.00%
Bootstrap support for F7AEP2 as seed ortholog is 100%.
Bootstrap support for B5DR31 as seed ortholog is 100%.

Group of orthologs #2476. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 D.pseudoobscura:209

F6PWM6              	100.00%		Q29JH7              	100.00%
Bootstrap support for F6PWM6 as seed ortholog is 99%.
Bootstrap support for Q29JH7 as seed ortholog is 100%.

Group of orthologs #2477. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 D.pseudoobscura:209

F6SNU1              	100.00%		Q29K21              	100.00%
Bootstrap support for F6SNU1 as seed ortholog is 100%.
Bootstrap support for Q29K21 as seed ortholog is 100%.

Group of orthologs #2478. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 D.pseudoobscura:209

F6YJ10              	100.00%		Q29FJ5              	100.00%
Bootstrap support for F6YJ10 as seed ortholog is 100%.
Bootstrap support for Q29FJ5 as seed ortholog is 100%.

Group of orthologs #2479. Best score 209 bits
Score difference with first non-orthologous sequence - C.intestinalis:209 D.pseudoobscura:209

F7B0F3              	100.00%		Q29AD0              	100.00%
Bootstrap support for F7B0F3 as seed ortholog is 100%.
Bootstrap support for Q29AD0 as seed ortholog is 100%.

Group of orthologs #2480. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 D.pseudoobscura:64

F6Z1X1              	100.00%		Q28XI1              	100.00%
F6Z1X8              	41.72%		Q28YG9              	24.62%
F7BHU7              	15.26%		B5DW57              	10.64%
                    	       		Q29AN3              	10.23%
                    	       		B5DW59              	9.42%
                    	       		B5DUY3              	9.42%
                    	       		B5DW58              	9.02%
                    	       		Q291X7              	8.21%
                    	       		Q2LYX6              	7.09%
                    	       		Q29AM3              	5.98%
                    	       		Q28WS0              	5.27%
Bootstrap support for F6Z1X1 as seed ortholog is 99%.
Bootstrap support for Q28XI1 as seed ortholog is 91%.

Group of orthologs #2481. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 D.pseudoobscura:208

F6WUG3              	100.00%		B5DMW8              	100.00%
Bootstrap support for F6WUG3 as seed ortholog is 100%.
Bootstrap support for B5DMW8 as seed ortholog is 100%.

Group of orthologs #2482. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 D.pseudoobscura:208

F7AKV8              	100.00%		B5DLR5              	100.00%
Bootstrap support for F7AKV8 as seed ortholog is 100%.
Bootstrap support for B5DLR5 as seed ortholog is 100%.

Group of orthologs #2483. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 D.pseudoobscura:29

H2XNZ7              	100.00%		B5DKH1              	100.00%
Bootstrap support for H2XNZ7 as seed ortholog is 100%.
Bootstrap support for B5DKH1 as seed ortholog is 95%.

Group of orthologs #2484. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 D.pseudoobscura:208

F7ANK8              	100.00%		Q28XM8              	100.00%
Bootstrap support for F7ANK8 as seed ortholog is 100%.
Bootstrap support for Q28XM8 as seed ortholog is 100%.

Group of orthologs #2485. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:129

H2Y1V5              	100.00%		B5DXU3              	100.00%
Bootstrap support for H2Y1V5 as seed ortholog is 100%.
Bootstrap support for B5DXU3 as seed ortholog is 100%.

Group of orthologs #2486. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 D.pseudoobscura:208

Q8HIN6              	100.00%		D2SXY9              	100.00%
Bootstrap support for Q8HIN6 as seed ortholog is 100%.
Bootstrap support for D2SXY9 as seed ortholog is 100%.

Group of orthologs #2487. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:208 D.pseudoobscura:208

F7BPM3              	100.00%		Q29LE0              	100.00%
Bootstrap support for F7BPM3 as seed ortholog is 100%.
Bootstrap support for Q29LE0 as seed ortholog is 100%.

Group of orthologs #2488. Best score 208 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 D.pseudoobscura:136

H2XT98              	100.00%		Q29C69              	100.00%
Bootstrap support for H2XT98 as seed ortholog is 99%.
Bootstrap support for Q29C69 as seed ortholog is 100%.

Group of orthologs #2489. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 D.pseudoobscura:66

F6RYM0              	100.00%		B5DX09              	100.00%
F6VTS4              	73.48%		B5DX10              	65.19%
                    	       		B5DX11              	43.84%
                    	       		B5E1C5              	38.59%
                    	       		Q292X1              	9.03%
                    	       		Q292U3              	6.40%
Bootstrap support for F6RYM0 as seed ortholog is 91%.
Bootstrap support for B5DX09 as seed ortholog is 95%.

Group of orthologs #2490. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 D.pseudoobscura:207

F6ZUK5              	100.00%		Q28YH4              	100.00%
Bootstrap support for F6ZUK5 as seed ortholog is 100%.
Bootstrap support for Q28YH4 as seed ortholog is 100%.

Group of orthologs #2491. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 D.pseudoobscura:207

F6QVI1              	100.00%		Q29NG2              	100.00%
Bootstrap support for F6QVI1 as seed ortholog is 100%.
Bootstrap support for Q29NG2 as seed ortholog is 100%.

Group of orthologs #2492. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 D.pseudoobscura:40

F6Z156              	100.00%		Q29F84              	100.00%
Bootstrap support for F6Z156 as seed ortholog is 94%.
Bootstrap support for Q29F84 as seed ortholog is 95%.

Group of orthologs #2493. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 D.pseudoobscura:207

H2XUN3              	100.00%		Q28YP3              	100.00%
Bootstrap support for H2XUN3 as seed ortholog is 100%.
Bootstrap support for Q28YP3 as seed ortholog is 100%.

Group of orthologs #2494. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:207 D.pseudoobscura:207

F7AYB2              	100.00%		Q29IL9              	100.00%
Bootstrap support for F7AYB2 as seed ortholog is 100%.
Bootstrap support for Q29IL9 as seed ortholog is 100%.

Group of orthologs #2495. Best score 207 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 D.pseudoobscura:61

H2XNP4              	100.00%		Q29M57              	100.00%
Bootstrap support for H2XNP4 as seed ortholog is 70%.
Alternative seed ortholog is F6U7K8 (15 bits away from this cluster)
Bootstrap support for Q29M57 as seed ortholog is 93%.

Group of orthologs #2496. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 D.pseudoobscura:113

F7AZ83              	100.00%		Q290Q0              	100.00%
Bootstrap support for F7AZ83 as seed ortholog is 100%.
Bootstrap support for Q290Q0 as seed ortholog is 97%.

Group of orthologs #2497. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 D.pseudoobscura:206

F7ASB0              	100.00%		Q293H8              	100.00%
Bootstrap support for F7ASB0 as seed ortholog is 100%.
Bootstrap support for Q293H8 as seed ortholog is 100%.

Group of orthologs #2498. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 D.pseudoobscura:206

F6ZGV0              	100.00%		Q29BB3              	100.00%
Bootstrap support for F6ZGV0 as seed ortholog is 100%.
Bootstrap support for Q29BB3 as seed ortholog is 100%.

Group of orthologs #2499. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 D.pseudoobscura:206

F7ASV8              	100.00%		Q298N4              	100.00%
Bootstrap support for F7ASV8 as seed ortholog is 100%.
Bootstrap support for Q298N4 as seed ortholog is 100%.

Group of orthologs #2500. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 D.pseudoobscura:206

H2XLH0              	100.00%		Q295G7              	100.00%
Bootstrap support for H2XLH0 as seed ortholog is 100%.
Bootstrap support for Q295G7 as seed ortholog is 100%.

Group of orthologs #2501. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 D.pseudoobscura:206

F7ACY4              	100.00%		Q2LZP5              	100.00%
Bootstrap support for F7ACY4 as seed ortholog is 100%.
Bootstrap support for Q2LZP5 as seed ortholog is 100%.

Group of orthologs #2502. Best score 206 bits
Score difference with first non-orthologous sequence - C.intestinalis:206 D.pseudoobscura:133

Q4H2Y1              	100.00%		Q29CC6              	100.00%
Bootstrap support for Q4H2Y1 as seed ortholog is 100%.
Bootstrap support for Q29CC6 as seed ortholog is 99%.

Group of orthologs #2503. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 D.pseudoobscura:205

F7B4V3              	100.00%		Q29D47              	100.00%
                    	       		B5DRH4              	20.88%
                    	       		B5DQZ1              	14.41%
                    	       		Q29FK2              	8.82%
                    	       		B5DJG9              	5.29%
Bootstrap support for F7B4V3 as seed ortholog is 99%.
Bootstrap support for Q29D47 as seed ortholog is 100%.

Group of orthologs #2504. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 D.pseudoobscura:205

H2XYE0              	100.00%		Q2LZD6              	100.00%
                    	       		Q2M097              	34.96%
                    	       		Q2M096              	29.35%
                    	       		B5DLS8              	20.83%
Bootstrap support for H2XYE0 as seed ortholog is 100%.
Bootstrap support for Q2LZD6 as seed ortholog is 100%.

Group of orthologs #2505. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 D.pseudoobscura:115

F6PP61              	100.00%		Q296B6              	100.00%
                    	       		B5DIT9              	8.53%
Bootstrap support for F6PP61 as seed ortholog is 100%.
Bootstrap support for Q296B6 as seed ortholog is 99%.

Group of orthologs #2506. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 D.pseudoobscura:205

H2Y0Q6              	100.00%		Q29GU0              	100.00%
                    	       		Q298C0              	47.26%
Bootstrap support for H2Y0Q6 as seed ortholog is 100%.
Bootstrap support for Q29GU0 as seed ortholog is 100%.

Group of orthologs #2507. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 D.pseudoobscura:205

F6Q021              	100.00%		B5DS02              	100.00%
Bootstrap support for F6Q021 as seed ortholog is 100%.
Bootstrap support for B5DS02 as seed ortholog is 100%.

Group of orthologs #2508. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 D.pseudoobscura:205

F6WX23              	100.00%		B5DJJ2              	100.00%
Bootstrap support for F6WX23 as seed ortholog is 100%.
Bootstrap support for B5DJJ2 as seed ortholog is 100%.

Group of orthologs #2509. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 D.pseudoobscura:205

F6ZRQ5              	100.00%		B5DNQ3              	100.00%
Bootstrap support for F6ZRQ5 as seed ortholog is 100%.
Bootstrap support for B5DNQ3 as seed ortholog is 100%.

Group of orthologs #2510. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 D.pseudoobscura:205

F6SP08              	100.00%		Q29A50              	100.00%
Bootstrap support for F6SP08 as seed ortholog is 100%.
Bootstrap support for Q29A50 as seed ortholog is 100%.

Group of orthologs #2511. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 D.pseudoobscura:91

F6YFV6              	100.00%		Q28YM5              	100.00%
Bootstrap support for F6YFV6 as seed ortholog is 100%.
Bootstrap support for Q28YM5 as seed ortholog is 99%.

Group of orthologs #2512. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 D.pseudoobscura:205

F6T485              	100.00%		Q2LZY0              	100.00%
Bootstrap support for F6T485 as seed ortholog is 100%.
Bootstrap support for Q2LZY0 as seed ortholog is 100%.

Group of orthologs #2513. Best score 205 bits
Score difference with first non-orthologous sequence - C.intestinalis:205 D.pseudoobscura:205

H2XSM5              	100.00%		Q29DI5              	100.00%
Bootstrap support for H2XSM5 as seed ortholog is 100%.
Bootstrap support for Q29DI5 as seed ortholog is 100%.

Group of orthologs #2514. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 D.pseudoobscura:204

F6VAC9              	100.00%		Q298U8              	100.00%
F6U176              	18.11%		
F6XA69              	11.66%		
Bootstrap support for F6VAC9 as seed ortholog is 99%.
Bootstrap support for Q298U8 as seed ortholog is 100%.

Group of orthologs #2515. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 D.pseudoobscura:204

F6S7J0              	100.00%		Q28XH1              	100.00%
Bootstrap support for F6S7J0 as seed ortholog is 100%.
Bootstrap support for Q28XH1 as seed ortholog is 100%.

Group of orthologs #2516. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 D.pseudoobscura:204

F6R2V7              	100.00%		Q295T8              	100.00%
Bootstrap support for F6R2V7 as seed ortholog is 100%.
Bootstrap support for Q295T8 as seed ortholog is 100%.

Group of orthologs #2517. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 D.pseudoobscura:160

F6UTK0              	100.00%		Q28ZX3              	100.00%
Bootstrap support for F6UTK0 as seed ortholog is 100%.
Bootstrap support for Q28ZX3 as seed ortholog is 100%.

Group of orthologs #2518. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 D.pseudoobscura:204

H2XTJ5              	100.00%		B5DZB4              	100.00%
Bootstrap support for H2XTJ5 as seed ortholog is 100%.
Bootstrap support for B5DZB4 as seed ortholog is 100%.

Group of orthologs #2519. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 D.pseudoobscura:204

F6ZBF1              	100.00%		Q29FA2              	100.00%
Bootstrap support for F6ZBF1 as seed ortholog is 100%.
Bootstrap support for Q29FA2 as seed ortholog is 100%.

Group of orthologs #2520. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 D.pseudoobscura:204

Q4H2Q4              	100.00%		B5DYJ9              	100.00%
Bootstrap support for Q4H2Q4 as seed ortholog is 100%.
Bootstrap support for B5DYJ9 as seed ortholog is 100%.

Group of orthologs #2521. Best score 204 bits
Score difference with first non-orthologous sequence - C.intestinalis:204 D.pseudoobscura:204

H2XUK5              	100.00%		Q29AH9              	100.00%
Bootstrap support for H2XUK5 as seed ortholog is 100%.
Bootstrap support for Q29AH9 as seed ortholog is 100%.

Group of orthologs #2522. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 D.pseudoobscura:203

F6S5M6              	100.00%		B5DQF8              	100.00%
F6QKZ8              	31.03%		
F6XCC4              	28.04%		
F6Q0H1              	26.31%		
F6VLU0              	23.91%		
H2XTR0              	19.87%		
F6UAN9              	17.02%		
F6PHT0              	9.90%		
F7AQJ2              	9.82%		
F6V6I7              	8.55%		
Bootstrap support for F6S5M6 as seed ortholog is 97%.
Bootstrap support for B5DQF8 as seed ortholog is 100%.

Group of orthologs #2523. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 D.pseudoobscura:203

F6RCD1              	100.00%		B5DTF8              	100.00%
Bootstrap support for F6RCD1 as seed ortholog is 100%.
Bootstrap support for B5DTF8 as seed ortholog is 100%.

Group of orthologs #2524. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 D.pseudoobscura:203

F6WNQ6              	100.00%		B5DIQ6              	100.00%
Bootstrap support for F6WNQ6 as seed ortholog is 100%.
Bootstrap support for B5DIQ6 as seed ortholog is 100%.

Group of orthologs #2525. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 D.pseudoobscura:203

F6PH58              	100.00%		Q295T0              	100.00%
Bootstrap support for F6PH58 as seed ortholog is 100%.
Bootstrap support for Q295T0 as seed ortholog is 100%.

Group of orthologs #2526. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 D.pseudoobscura:203

F6Z010              	100.00%		B5E1K7              	100.00%
Bootstrap support for F6Z010 as seed ortholog is 100%.
Bootstrap support for B5E1K7 as seed ortholog is 100%.

Group of orthologs #2527. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 D.pseudoobscura:203

F6VE75              	100.00%		Q296E5              	100.00%
Bootstrap support for F6VE75 as seed ortholog is 100%.
Bootstrap support for Q296E5 as seed ortholog is 100%.

Group of orthologs #2528. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 D.pseudoobscura:203

F6ZJ88              	100.00%		Q290B7              	100.00%
Bootstrap support for F6ZJ88 as seed ortholog is 100%.
Bootstrap support for Q290B7 as seed ortholog is 100%.

Group of orthologs #2529. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 D.pseudoobscura:203

F6YLE1              	100.00%		Q29I09              	100.00%
Bootstrap support for F6YLE1 as seed ortholog is 100%.
Bootstrap support for Q29I09 as seed ortholog is 100%.

Group of orthologs #2530. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 D.pseudoobscura:203

F6ZUM5              	100.00%		Q29GQ5              	100.00%
Bootstrap support for F6ZUM5 as seed ortholog is 100%.
Bootstrap support for Q29GQ5 as seed ortholog is 100%.

Group of orthologs #2531. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 D.pseudoobscura:84

F6ZBK7              	100.00%		Q29J48              	100.00%
Bootstrap support for F6ZBK7 as seed ortholog is 100%.
Bootstrap support for Q29J48 as seed ortholog is 93%.

Group of orthologs #2532. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:123

H2XUW4              	100.00%		Q29IP3              	100.00%
Bootstrap support for H2XUW4 as seed ortholog is 99%.
Bootstrap support for Q29IP3 as seed ortholog is 99%.

Group of orthologs #2533. Best score 203 bits
Score difference with first non-orthologous sequence - C.intestinalis:203 D.pseudoobscura:203

H2XQ06              	100.00%		Q2M105              	100.00%
Bootstrap support for H2XQ06 as seed ortholog is 100%.
Bootstrap support for Q2M105 as seed ortholog is 100%.

Group of orthologs #2534. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 D.pseudoobscura:115

H2XMX1              	100.00%		Q294A2              	100.00%
                    	       		Q29PM2              	100.00%
                    	       		B5DLD6              	67.41%
Bootstrap support for H2XMX1 as seed ortholog is 99%.
Bootstrap support for Q294A2 as seed ortholog is 99%.
Bootstrap support for Q29PM2 as seed ortholog is 99%.

Group of orthologs #2535. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 D.pseudoobscura:202

Q8T888              	100.00%		Q28ZG9              	100.00%
                    	       		Q29KD0              	13.37%
Bootstrap support for Q8T888 as seed ortholog is 100%.
Bootstrap support for Q28ZG9 as seed ortholog is 100%.

Group of orthologs #2536. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 D.pseudoobscura:202

F6WWT1              	100.00%		B5DPD8              	100.00%
Bootstrap support for F6WWT1 as seed ortholog is 100%.
Bootstrap support for B5DPD8 as seed ortholog is 100%.

Group of orthologs #2537. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 D.pseudoobscura:202

F6VDY1              	100.00%		Q29GE0              	100.00%
Bootstrap support for F6VDY1 as seed ortholog is 100%.
Bootstrap support for Q29GE0 as seed ortholog is 100%.

Group of orthologs #2538. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 D.pseudoobscura:33

F6YGZ1              	100.00%		Q29A63              	100.00%
Bootstrap support for F6YGZ1 as seed ortholog is 100%.
Bootstrap support for Q29A63 as seed ortholog is 57%.
Alternative seed ortholog is B5DHA5 (33 bits away from this cluster)

Group of orthologs #2539. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 D.pseudoobscura:202

F6Z998              	100.00%		Q29FA0              	100.00%
Bootstrap support for F6Z998 as seed ortholog is 100%.
Bootstrap support for Q29FA0 as seed ortholog is 100%.

Group of orthologs #2540. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 D.pseudoobscura:202

F6XPS9              	100.00%		Q29M52              	100.00%
Bootstrap support for F6XPS9 as seed ortholog is 100%.
Bootstrap support for Q29M52 as seed ortholog is 100%.

Group of orthologs #2541. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 D.pseudoobscura:202

H2XTN0              	100.00%		Q291T1              	100.00%
Bootstrap support for H2XTN0 as seed ortholog is 100%.
Bootstrap support for Q291T1 as seed ortholog is 100%.

Group of orthologs #2542. Best score 202 bits
Score difference with first non-orthologous sequence - C.intestinalis:202 D.pseudoobscura:202

H2XT29              	100.00%		Q29CG8              	100.00%
Bootstrap support for H2XT29 as seed ortholog is 100%.
Bootstrap support for Q29CG8 as seed ortholog is 100%.

Group of orthologs #2543. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 D.pseudoobscura:90

F6RZD9              	100.00%		B5DTL3              	100.00%
F6SY55              	23.13%		
Bootstrap support for F6RZD9 as seed ortholog is 98%.
Bootstrap support for B5DTL3 as seed ortholog is 95%.

Group of orthologs #2544. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 D.pseudoobscura:107

F6QBI4              	100.00%		Q29KU8              	100.00%
                    	       		Q29KU5              	11.83%
Bootstrap support for F6QBI4 as seed ortholog is 100%.
Bootstrap support for Q29KU8 as seed ortholog is 99%.

Group of orthologs #2545. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 D.pseudoobscura:201

F6ZNE7              	100.00%		Q29F60              	100.00%
                    	       		Q29F62              	42.26%
Bootstrap support for F6ZNE7 as seed ortholog is 100%.
Bootstrap support for Q29F60 as seed ortholog is 100%.

Group of orthologs #2546. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 D.pseudoobscura:201

F6RRD5              	100.00%		Q290Z0              	100.00%
Bootstrap support for F6RRD5 as seed ortholog is 100%.
Bootstrap support for Q290Z0 as seed ortholog is 100%.

Group of orthologs #2547. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 D.pseudoobscura:201

F6PN13              	100.00%		Q298K7              	100.00%
Bootstrap support for F6PN13 as seed ortholog is 99%.
Bootstrap support for Q298K7 as seed ortholog is 100%.

Group of orthologs #2548. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 D.pseudoobscura:201

F6VUH2              	100.00%		I5AMW7              	100.00%
Bootstrap support for F6VUH2 as seed ortholog is 100%.
Bootstrap support for I5AMW7 as seed ortholog is 100%.

Group of orthologs #2549. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 D.pseudoobscura:201

F6ZYA6              	100.00%		Q28XW6              	100.00%
Bootstrap support for F6ZYA6 as seed ortholog is 100%.
Bootstrap support for Q28XW6 as seed ortholog is 100%.

Group of orthologs #2550. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 D.pseudoobscura:201

F6RRS1              	100.00%		Q2LZ72              	100.00%
Bootstrap support for F6RRS1 as seed ortholog is 100%.
Bootstrap support for Q2LZ72 as seed ortholog is 100%.

Group of orthologs #2551. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 D.pseudoobscura:201

F6ZCF4              	100.00%		Q29HY2              	100.00%
Bootstrap support for F6ZCF4 as seed ortholog is 100%.
Bootstrap support for Q29HY2 as seed ortholog is 100%.

Group of orthologs #2552. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 D.pseudoobscura:201

H2XLW7              	100.00%		Q29H32              	100.00%
Bootstrap support for H2XLW7 as seed ortholog is 100%.
Bootstrap support for Q29H32 as seed ortholog is 100%.

Group of orthologs #2553. Best score 201 bits
Score difference with first non-orthologous sequence - C.intestinalis:201 D.pseudoobscura:201

H2XZ35              	100.00%		Q29AM8              	100.00%
Bootstrap support for H2XZ35 as seed ortholog is 100%.
Bootstrap support for Q29AM8 as seed ortholog is 100%.

Group of orthologs #2554. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 D.pseudoobscura:200

F6VIZ2              	100.00%		Q28Z04              	100.00%
Bootstrap support for F6VIZ2 as seed ortholog is 100%.
Bootstrap support for Q28Z04 as seed ortholog is 100%.

Group of orthologs #2555. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 D.pseudoobscura:200

F6W122              	100.00%		Q292N4              	100.00%
Bootstrap support for F6W122 as seed ortholog is 100%.
Bootstrap support for Q292N4 as seed ortholog is 100%.

Group of orthologs #2556. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 D.pseudoobscura:114

F6TTC3              	100.00%		Q29JH3              	100.00%
Bootstrap support for F6TTC3 as seed ortholog is 100%.
Bootstrap support for Q29JH3 as seed ortholog is 99%.

Group of orthologs #2557. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 D.pseudoobscura:200

H2XJL7              	100.00%		Q296B4              	100.00%
Bootstrap support for H2XJL7 as seed ortholog is 100%.
Bootstrap support for Q296B4 as seed ortholog is 100%.

Group of orthologs #2558. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 D.pseudoobscura:78

F6ZHQ2              	100.00%		Q29K49              	100.00%
Bootstrap support for F6ZHQ2 as seed ortholog is 99%.
Bootstrap support for Q29K49 as seed ortholog is 99%.

Group of orthologs #2559. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 D.pseudoobscura:200

H2XLI1              	100.00%		Q29G80              	100.00%
Bootstrap support for H2XLI1 as seed ortholog is 100%.
Bootstrap support for Q29G80 as seed ortholog is 100%.

Group of orthologs #2560. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 D.pseudoobscura:33

H2XJR2              	100.00%		Q29MQ7              	100.00%
Bootstrap support for H2XJR2 as seed ortholog is 99%.
Bootstrap support for Q29MQ7 as seed ortholog is 89%.

Group of orthologs #2561. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 D.pseudoobscura:200

H2XVP4              	100.00%		Q29EF5              	100.00%
Bootstrap support for H2XVP4 as seed ortholog is 100%.
Bootstrap support for Q29EF5 as seed ortholog is 100%.

Group of orthologs #2562. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:200 D.pseudoobscura:200

H2XKF1              	100.00%		Q2LZQ2              	100.00%
Bootstrap support for H2XKF1 as seed ortholog is 100%.
Bootstrap support for Q2LZQ2 as seed ortholog is 100%.

Group of orthologs #2563. Best score 200 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 D.pseudoobscura:100

H2XYZ0              	100.00%		Q29GR9              	100.00%
Bootstrap support for H2XYZ0 as seed ortholog is 86%.
Bootstrap support for Q29GR9 as seed ortholog is 99%.

Group of orthologs #2564. Best score 199 bits
Score difference with first non-orthologous sequence - C.intestinalis:199 D.pseudoobscura:155

F6WUC3              	100.00%		Q294Y7              	100.00%
Bootstrap support for F6WUC3 as seed ortholog is 100%.
Bootstrap support for Q294Y7 as seed ortholog is 99%.

Group of orthologs #2565. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 D.pseudoobscura:32

F6RPK0              	100.00%		B5DW11              	100.00%
F6PUC9              	58.28%		Q297W4              	89.07%
F6PTH0              	45.52%		Q29B02              	65.23%
F6PTW3              	43.79%		Q29JB2              	56.95%
F6RPI4              	39.66%		Q29PP0              	20.53%
                    	       		B5DL86              	17.55%
                    	       		Q29HJ6              	11.26%
                    	       		B5DLN2              	9.93%
                    	       		B5DN93              	8.61%
                    	       		B5DLN1              	8.28%
Bootstrap support for F6RPK0 as seed ortholog is 99%.
Bootstrap support for B5DW11 as seed ortholog is 86%.

Group of orthologs #2566. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 D.pseudoobscura:198

F6VYZ5              	100.00%		Q2LZP2              	100.00%
                    	       		Q29ET9              	26.50%
Bootstrap support for F6VYZ5 as seed ortholog is 100%.
Bootstrap support for Q2LZP2 as seed ortholog is 100%.

Group of orthologs #2567. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 D.pseudoobscura:198

F6SY86              	100.00%		B5DS66              	100.00%
Bootstrap support for F6SY86 as seed ortholog is 100%.
Bootstrap support for B5DS66 as seed ortholog is 100%.

Group of orthologs #2568. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 D.pseudoobscura:198

F6WGY1              	100.00%		B5DXG8              	100.00%
Bootstrap support for F6WGY1 as seed ortholog is 100%.
Bootstrap support for B5DXG8 as seed ortholog is 100%.

Group of orthologs #2569. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 D.pseudoobscura:198

F6RJ12              	100.00%		Q29NC7              	100.00%
Bootstrap support for F6RJ12 as seed ortholog is 100%.
Bootstrap support for Q29NC7 as seed ortholog is 100%.

Group of orthologs #2570. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 D.pseudoobscura:198

F6XS68              	100.00%		Q29B18              	100.00%
Bootstrap support for F6XS68 as seed ortholog is 100%.
Bootstrap support for Q29B18 as seed ortholog is 100%.

Group of orthologs #2571. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 D.pseudoobscura:84

F6WML9              	100.00%		Q29EU4              	100.00%
Bootstrap support for F6WML9 as seed ortholog is 100%.
Bootstrap support for Q29EU4 as seed ortholog is 99%.

Group of orthologs #2572. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 D.pseudoobscura:198

F6UU89              	100.00%		Q29ML8              	100.00%
Bootstrap support for F6UU89 as seed ortholog is 100%.
Bootstrap support for Q29ML8 as seed ortholog is 100%.

Group of orthologs #2573. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 D.pseudoobscura:69

F6YXX9              	100.00%		Q2M119              	100.00%
Bootstrap support for F6YXX9 as seed ortholog is 100%.
Bootstrap support for Q2M119 as seed ortholog is 92%.

Group of orthologs #2574. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 D.pseudoobscura:31

Q1RLI9              	100.00%		Q290V0              	100.00%
Bootstrap support for Q1RLI9 as seed ortholog is 100%.
Bootstrap support for Q290V0 as seed ortholog is 66%.
Alternative seed ortholog is Q29GC6 (31 bits away from this cluster)

Group of orthologs #2575. Best score 198 bits
Score difference with first non-orthologous sequence - C.intestinalis:198 D.pseudoobscura:198

H2XR04              	100.00%		Q29P65              	100.00%
Bootstrap support for H2XR04 as seed ortholog is 100%.
Bootstrap support for Q29P65 as seed ortholog is 100%.

Group of orthologs #2576. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 D.pseudoobscura:56

F6UXM4              	100.00%		B5DV48              	100.00%
                    	       		Q2M022              	89.35%
Bootstrap support for F6UXM4 as seed ortholog is 99%.
Bootstrap support for B5DV48 as seed ortholog is 98%.

Group of orthologs #2577. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 D.pseudoobscura:197

F6YGN3              	100.00%		B5DRB3              	100.00%
F7A8J9              	18.13%		
Bootstrap support for F6YGN3 as seed ortholog is 100%.
Bootstrap support for B5DRB3 as seed ortholog is 100%.

Group of orthologs #2578. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 D.pseudoobscura:197

F6T1T3              	100.00%		I5AMS2              	100.00%
Bootstrap support for F6T1T3 as seed ortholog is 100%.
Bootstrap support for I5AMS2 as seed ortholog is 100%.

Group of orthologs #2579. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 D.pseudoobscura:197

F6SVN8              	100.00%		Q296G0              	100.00%
Bootstrap support for F6SVN8 as seed ortholog is 100%.
Bootstrap support for Q296G0 as seed ortholog is 100%.

Group of orthologs #2580. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 D.pseudoobscura:197

F6RGF8              	100.00%		Q29LK1              	100.00%
Bootstrap support for F6RGF8 as seed ortholog is 100%.
Bootstrap support for Q29LK1 as seed ortholog is 100%.

Group of orthologs #2581. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 D.pseudoobscura:197

F6SJE3              	100.00%		Q29LU2              	100.00%
Bootstrap support for F6SJE3 as seed ortholog is 100%.
Bootstrap support for Q29LU2 as seed ortholog is 100%.

Group of orthologs #2582. Best score 197 bits
Score difference with first non-orthologous sequence - C.intestinalis:197 D.pseudoobscura:197

F6ZZC3              	100.00%		Q294H8              	100.00%
Bootstrap support for F6ZZC3 as seed ortholog is 100%.
Bootstrap support for Q294H8 as seed ortholog is 100%.

Group of orthologs #2583. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 D.pseudoobscura:196

Q5VHU3              	100.00%		Q294C0              	100.00%
Q5VHU5              	35.43%		
Bootstrap support for Q5VHU3 as seed ortholog is 100%.
Bootstrap support for Q294C0 as seed ortholog is 100%.

Group of orthologs #2584. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 D.pseudoobscura:196

F6YTY3              	100.00%		B5DMN8              	100.00%
Bootstrap support for F6YTY3 as seed ortholog is 100%.
Bootstrap support for B5DMN8 as seed ortholog is 100%.

Group of orthologs #2585. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 D.pseudoobscura:196

F6U5L2              	100.00%		Q296S2              	100.00%
Bootstrap support for F6U5L2 as seed ortholog is 100%.
Bootstrap support for Q296S2 as seed ortholog is 100%.

Group of orthologs #2586. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 D.pseudoobscura:196

F6UIM4              	100.00%		Q29A62              	100.00%
Bootstrap support for F6UIM4 as seed ortholog is 100%.
Bootstrap support for Q29A62 as seed ortholog is 100%.

Group of orthologs #2587. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 D.pseudoobscura:196

F6WQS5              	100.00%		Q293D5              	100.00%
Bootstrap support for F6WQS5 as seed ortholog is 100%.
Bootstrap support for Q293D5 as seed ortholog is 100%.

Group of orthologs #2588. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 D.pseudoobscura:196

F6QSC7              	100.00%		Q29MJ0              	100.00%
Bootstrap support for F6QSC7 as seed ortholog is 100%.
Bootstrap support for Q29MJ0 as seed ortholog is 100%.

Group of orthologs #2589. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 D.pseudoobscura:102

F7A4V3              	100.00%		Q28YR1              	100.00%
Bootstrap support for F7A4V3 as seed ortholog is 100%.
Bootstrap support for Q28YR1 as seed ortholog is 98%.

Group of orthologs #2590. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 D.pseudoobscura:196

F6U3H2              	100.00%		Q29L80              	100.00%
Bootstrap support for F6U3H2 as seed ortholog is 100%.
Bootstrap support for Q29L80 as seed ortholog is 100%.

Group of orthologs #2591. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 D.pseudoobscura:196

F6VXB1              	100.00%		Q29MZ6              	100.00%
Bootstrap support for F6VXB1 as seed ortholog is 100%.
Bootstrap support for Q29MZ6 as seed ortholog is 100%.

Group of orthologs #2592. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 D.pseudoobscura:196

F7B4X6              	100.00%		Q29PD6              	100.00%
Bootstrap support for F7B4X6 as seed ortholog is 100%.
Bootstrap support for Q29PD6 as seed ortholog is 100%.

Group of orthologs #2593. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 D.pseudoobscura:196

Q8SSZ0              	100.00%		Q29JT7              	100.00%
Bootstrap support for Q8SSZ0 as seed ortholog is 100%.
Bootstrap support for Q29JT7 as seed ortholog is 100%.

Group of orthologs #2594. Best score 196 bits
Score difference with first non-orthologous sequence - C.intestinalis:196 D.pseudoobscura:196

Q3MQ22              	100.00%		Q3MQ15              	100.00%
Bootstrap support for Q3MQ22 as seed ortholog is 100%.
Bootstrap support for Q3MQ15 as seed ortholog is 100%.

Group of orthologs #2595. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 D.pseudoobscura:20

F6ZUZ5              	100.00%		Q29FU0              	100.00%
                    	       		Q293B3              	11.83%
Bootstrap support for F6ZUZ5 as seed ortholog is 97%.
Bootstrap support for Q29FU0 as seed ortholog is 67%.
Alternative seed ortholog is Q29FR1 (20 bits away from this cluster)

Group of orthologs #2596. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 D.pseudoobscura:195

F6TX13              	100.00%		Q293M0              	100.00%
Bootstrap support for F6TX13 as seed ortholog is 100%.
Bootstrap support for Q293M0 as seed ortholog is 100%.

Group of orthologs #2597. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 D.pseudoobscura:195

F6PV66              	100.00%		Q29HG6              	100.00%
Bootstrap support for F6PV66 as seed ortholog is 100%.
Bootstrap support for Q29HG6 as seed ortholog is 100%.

Group of orthologs #2598. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 D.pseudoobscura:195

F6QDJ6              	100.00%		Q29PD9              	100.00%
Bootstrap support for F6QDJ6 as seed ortholog is 100%.
Bootstrap support for Q29PD9 as seed ortholog is 100%.

Group of orthologs #2599. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 D.pseudoobscura:195

F6WTN6              	100.00%		Q29D76              	100.00%
Bootstrap support for F6WTN6 as seed ortholog is 100%.
Bootstrap support for Q29D76 as seed ortholog is 100%.

Group of orthologs #2600. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 D.pseudoobscura:195

F6UUA2              	100.00%		Q29L91              	100.00%
Bootstrap support for F6UUA2 as seed ortholog is 100%.
Bootstrap support for Q29L91 as seed ortholog is 100%.

Group of orthologs #2601. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 D.pseudoobscura:195

F6ZG04              	100.00%		Q29I50              	100.00%
Bootstrap support for F6ZG04 as seed ortholog is 100%.
Bootstrap support for Q29I50 as seed ortholog is 100%.

Group of orthologs #2602. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 D.pseudoobscura:195

H2Y1Y8              	100.00%		Q28X51              	100.00%
Bootstrap support for H2Y1Y8 as seed ortholog is 100%.
Bootstrap support for Q28X51 as seed ortholog is 100%.

Group of orthologs #2603. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 D.pseudoobscura:195

H2XL14              	100.00%		Q29NM5              	100.00%
Bootstrap support for H2XL14 as seed ortholog is 100%.
Bootstrap support for Q29NM5 as seed ortholog is 100%.

Group of orthologs #2604. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 D.pseudoobscura:195

Q8T886              	100.00%		Q29DY7              	100.00%
Bootstrap support for Q8T886 as seed ortholog is 100%.
Bootstrap support for Q29DY7 as seed ortholog is 100%.

Group of orthologs #2605. Best score 195 bits
Score difference with first non-orthologous sequence - C.intestinalis:195 D.pseudoobscura:124

H2Y3L9              	100.00%		Q29NB2              	100.00%
Bootstrap support for H2Y3L9 as seed ortholog is 100%.
Bootstrap support for Q29NB2 as seed ortholog is 100%.

Group of orthologs #2606. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 D.pseudoobscura:22

F6V0N3              	100.00%		Q291K5              	100.00%
F6YCW2              	82.88%		Q28X78              	29.72%
F7AQZ5              	12.20%		
F7AR10              	9.19%		
Bootstrap support for F6V0N3 as seed ortholog is 86%.
Bootstrap support for Q291K5 as seed ortholog is 72%.
Alternative seed ortholog is Q29FR1 (22 bits away from this cluster)

Group of orthologs #2607. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 D.pseudoobscura:194

F6QBE1              	100.00%		B5E0J8              	100.00%
Bootstrap support for F6QBE1 as seed ortholog is 100%.
Bootstrap support for B5E0J8 as seed ortholog is 100%.

Group of orthologs #2608. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 D.pseudoobscura:194

F6VKK3              	100.00%		Q290H7              	100.00%
Bootstrap support for F6VKK3 as seed ortholog is 100%.
Bootstrap support for Q290H7 as seed ortholog is 100%.

Group of orthologs #2609. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 D.pseudoobscura:194

F6XIG6              	100.00%		I5AP82              	100.00%
Bootstrap support for F6XIG6 as seed ortholog is 100%.
Bootstrap support for I5AP82 as seed ortholog is 100%.

Group of orthologs #2610. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 D.pseudoobscura:194

F6TJA4              	100.00%		Q298I2              	100.00%
Bootstrap support for F6TJA4 as seed ortholog is 100%.
Bootstrap support for Q298I2 as seed ortholog is 100%.

Group of orthologs #2611. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 D.pseudoobscura:194

F6WNU7              	100.00%		Q29FL7              	100.00%
Bootstrap support for F6WNU7 as seed ortholog is 100%.
Bootstrap support for Q29FL7 as seed ortholog is 100%.

Group of orthologs #2612. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 D.pseudoobscura:194

H2XTT0              	100.00%		I5AMQ1              	100.00%
Bootstrap support for H2XTT0 as seed ortholog is 100%.
Bootstrap support for I5AMQ1 as seed ortholog is 100%.

Group of orthologs #2613. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 D.pseudoobscura:149

H2XW02              	100.00%		Q298A9              	100.00%
Bootstrap support for H2XW02 as seed ortholog is 100%.
Bootstrap support for Q298A9 as seed ortholog is 100%.

Group of orthologs #2614. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:194 D.pseudoobscura:194

Q4H3U1              	100.00%		Q28XU9              	100.00%
Bootstrap support for Q4H3U1 as seed ortholog is 100%.
Bootstrap support for Q28XU9 as seed ortholog is 100%.

Group of orthologs #2615. Best score 194 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 D.pseudoobscura:194

Q1RL25              	100.00%		Q29I81              	100.00%
Bootstrap support for Q1RL25 as seed ortholog is 82%.
Bootstrap support for Q29I81 as seed ortholog is 100%.

Group of orthologs #2616. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 D.pseudoobscura:115

F7BN93              	100.00%		Q2M0X7              	100.00%
                    	       		B5DPZ5              	22.25%
                    	       		Q2LZ56              	12.11%
Bootstrap support for F7BN93 as seed ortholog is 100%.
Bootstrap support for Q2M0X7 as seed ortholog is 99%.

Group of orthologs #2617. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 D.pseudoobscura:98

F6XDJ2              	100.00%		B5DWY3              	100.00%
                    	       		Q292N0              	11.69%
Bootstrap support for F6XDJ2 as seed ortholog is 99%.
Bootstrap support for B5DWY3 as seed ortholog is 99%.

Group of orthologs #2618. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 D.pseudoobscura:151

F6V8I4              	100.00%		Q29HJ8              	100.00%
                    	       		Q295N1              	9.55%
Bootstrap support for F6V8I4 as seed ortholog is 86%.
Bootstrap support for Q29HJ8 as seed ortholog is 100%.

Group of orthologs #2619. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 D.pseudoobscura:193

F6QGB8              	100.00%		B5DUR2              	100.00%
Bootstrap support for F6QGB8 as seed ortholog is 100%.
Bootstrap support for B5DUR2 as seed ortholog is 100%.

Group of orthologs #2620. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 D.pseudoobscura:193

F6Q4X5              	100.00%		Q29AE8              	100.00%
Bootstrap support for F6Q4X5 as seed ortholog is 100%.
Bootstrap support for Q29AE8 as seed ortholog is 100%.

Group of orthologs #2621. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 D.pseudoobscura:193

F6TIL4              	100.00%		Q292R9              	100.00%
Bootstrap support for F6TIL4 as seed ortholog is 86%.
Bootstrap support for Q292R9 as seed ortholog is 100%.

Group of orthologs #2622. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 D.pseudoobscura:193

F6QAG3              	100.00%		Q29NE2              	100.00%
Bootstrap support for F6QAG3 as seed ortholog is 100%.
Bootstrap support for Q29NE2 as seed ortholog is 100%.

Group of orthologs #2623. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 D.pseudoobscura:193

F7B404              	100.00%		Q28XH2              	100.00%
Bootstrap support for F7B404 as seed ortholog is 100%.
Bootstrap support for Q28XH2 as seed ortholog is 100%.

Group of orthologs #2624. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 D.pseudoobscura:193

F6RED0              	100.00%		Q2LZH7              	100.00%
Bootstrap support for F6RED0 as seed ortholog is 100%.
Bootstrap support for Q2LZH7 as seed ortholog is 100%.

Group of orthologs #2625. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 D.pseudoobscura:193

H2XZ76              	100.00%		B5DQY2              	100.00%
Bootstrap support for H2XZ76 as seed ortholog is 100%.
Bootstrap support for B5DQY2 as seed ortholog is 100%.

Group of orthologs #2626. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 D.pseudoobscura:193

F6XUK1              	100.00%		Q29FC5              	100.00%
Bootstrap support for F6XUK1 as seed ortholog is 100%.
Bootstrap support for Q29FC5 as seed ortholog is 100%.

Group of orthologs #2627. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 D.pseudoobscura:127

F6Z9G9              	100.00%		Q29C02              	100.00%
Bootstrap support for F6Z9G9 as seed ortholog is 99%.
Bootstrap support for Q29C02 as seed ortholog is 99%.

Group of orthologs #2628. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 D.pseudoobscura:193

H2XXS5              	100.00%		Q296B9              	100.00%
Bootstrap support for H2XXS5 as seed ortholog is 100%.
Bootstrap support for Q296B9 as seed ortholog is 100%.

Group of orthologs #2629. Best score 193 bits
Score difference with first non-orthologous sequence - C.intestinalis:193 D.pseudoobscura:193

H2XNI2              	100.00%		Q29P39              	100.00%
Bootstrap support for H2XNI2 as seed ortholog is 100%.
Bootstrap support for Q29P39 as seed ortholog is 100%.

Group of orthologs #2630. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 D.pseudoobscura:29

H2XZV1              	100.00%		Q29LF3              	100.00%
                    	       		B5DUY5              	85.81%
Bootstrap support for H2XZV1 as seed ortholog is 100%.
Bootstrap support for Q29LF3 as seed ortholog is 84%.

Group of orthologs #2631. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 D.pseudoobscura:95

F6SU13              	100.00%		P84323              	100.00%
Bootstrap support for F6SU13 as seed ortholog is 100%.
Bootstrap support for P84323 as seed ortholog is 99%.

Group of orthologs #2632. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 D.pseudoobscura:192

F6V580              	100.00%		Q28XR7              	100.00%
Bootstrap support for F6V580 as seed ortholog is 100%.
Bootstrap support for Q28XR7 as seed ortholog is 100%.

Group of orthologs #2633. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 D.pseudoobscura:192

F6X5W4              	100.00%		Q28XZ4              	100.00%
Bootstrap support for F6X5W4 as seed ortholog is 100%.
Bootstrap support for Q28XZ4 as seed ortholog is 100%.

Group of orthologs #2634. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 D.pseudoobscura:192

F6ZNK2              	100.00%		B5DZH7              	100.00%
Bootstrap support for F6ZNK2 as seed ortholog is 93%.
Bootstrap support for B5DZH7 as seed ortholog is 100%.

Group of orthologs #2635. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 D.pseudoobscura:24

F6T302              	100.00%		Q29JU4              	100.00%
Bootstrap support for F6T302 as seed ortholog is 100%.
Bootstrap support for Q29JU4 as seed ortholog is 76%.

Group of orthologs #2636. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 D.pseudoobscura:192

F6WF37              	100.00%		Q29EN0              	100.00%
Bootstrap support for F6WF37 as seed ortholog is 100%.
Bootstrap support for Q29EN0 as seed ortholog is 100%.

Group of orthologs #2637. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 D.pseudoobscura:192

F6VLF4              	100.00%		Q29K72              	100.00%
Bootstrap support for F6VLF4 as seed ortholog is 100%.
Bootstrap support for Q29K72 as seed ortholog is 100%.

Group of orthologs #2638. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 D.pseudoobscura:192

F6YI57              	100.00%		Q29I72              	100.00%
Bootstrap support for F6YI57 as seed ortholog is 100%.
Bootstrap support for Q29I72 as seed ortholog is 100%.

Group of orthologs #2639. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 D.pseudoobscura:192

H2XPN9              	100.00%		Q29D87              	100.00%
Bootstrap support for H2XPN9 as seed ortholog is 100%.
Bootstrap support for Q29D87 as seed ortholog is 100%.

Group of orthologs #2640. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 D.pseudoobscura:118

Q256Z9              	100.00%		Q256Z4              	100.00%
Bootstrap support for Q256Z9 as seed ortholog is 100%.
Bootstrap support for Q256Z4 as seed ortholog is 99%.

Group of orthologs #2641. Best score 192 bits
Score difference with first non-orthologous sequence - C.intestinalis:192 D.pseudoobscura:192

F7BFG7              	100.00%		Q29P25              	100.00%
Bootstrap support for F7BFG7 as seed ortholog is 100%.
Bootstrap support for Q29P25 as seed ortholog is 100%.

Group of orthologs #2642. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 D.pseudoobscura:191

H2XMJ7              	100.00%		I7M6Y7              	100.00%
                    	       		I7KLG7              	14.65%
Bootstrap support for H2XMJ7 as seed ortholog is 100%.
Bootstrap support for I7M6Y7 as seed ortholog is 100%.

Group of orthologs #2643. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 D.pseudoobscura:191

F6YWK0              	100.00%		B5DQM3              	100.00%
Bootstrap support for F6YWK0 as seed ortholog is 100%.
Bootstrap support for B5DQM3 as seed ortholog is 100%.

Group of orthologs #2644. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 D.pseudoobscura:191

F6VGI1              	100.00%		Q28WJ5              	100.00%
Bootstrap support for F6VGI1 as seed ortholog is 100%.
Bootstrap support for Q28WJ5 as seed ortholog is 100%.

Group of orthologs #2645. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 D.pseudoobscura:191

F6QJB5              	100.00%		Q29BY1              	100.00%
Bootstrap support for F6QJB5 as seed ortholog is 100%.
Bootstrap support for Q29BY1 as seed ortholog is 100%.

Group of orthologs #2646. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 D.pseudoobscura:191

F6RL73              	100.00%		Q29E15              	100.00%
Bootstrap support for F6RL73 as seed ortholog is 100%.
Bootstrap support for Q29E15 as seed ortholog is 100%.

Group of orthologs #2647. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 D.pseudoobscura:50

F6QIM1              	100.00%		Q29MH4              	100.00%
Bootstrap support for F6QIM1 as seed ortholog is 99%.
Bootstrap support for Q29MH4 as seed ortholog is 99%.

Group of orthologs #2648. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 D.pseudoobscura:191

F6V6F4              	100.00%		Q29I30              	100.00%
Bootstrap support for F6V6F4 as seed ortholog is 100%.
Bootstrap support for Q29I30 as seed ortholog is 100%.

Group of orthologs #2649. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 D.pseudoobscura:191

F6S2C6              	100.00%		Q2LZP4              	100.00%
Bootstrap support for F6S2C6 as seed ortholog is 100%.
Bootstrap support for Q2LZP4 as seed ortholog is 100%.

Group of orthologs #2650. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:20

H2XKU8              	100.00%		Q291X6              	100.00%
Bootstrap support for H2XKU8 as seed ortholog is 67%.
Alternative seed ortholog is F6V2P6 (70 bits away from this cluster)
Bootstrap support for Q291X6 as seed ortholog is 68%.
Alternative seed ortholog is Q29GN9 (20 bits away from this cluster)

Group of orthologs #2651. Best score 191 bits
Score difference with first non-orthologous sequence - C.intestinalis:191 D.pseudoobscura:191

F6XQV0              	100.00%		Q29LY6              	100.00%
Bootstrap support for F6XQV0 as seed ortholog is 100%.
Bootstrap support for Q29LY6 as seed ortholog is 100%.

Group of orthologs #2652. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:62

F6WW36              	100.00%		Q29HP4              	100.00%
H2XRG7              	8.54%		
Bootstrap support for F6WW36 as seed ortholog is 99%.
Bootstrap support for Q29HP4 as seed ortholog is 98%.

Group of orthologs #2653. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 D.pseudoobscura:190

H2XTS6              	100.00%		Q2M088              	100.00%
                    	       		Q29PJ6              	18.10%
Bootstrap support for H2XTS6 as seed ortholog is 100%.
Bootstrap support for Q2M088 as seed ortholog is 100%.

Group of orthologs #2654. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 D.pseudoobscura:190

F6Y1T4              	100.00%		B5DY10              	100.00%
Bootstrap support for F6Y1T4 as seed ortholog is 100%.
Bootstrap support for B5DY10 as seed ortholog is 100%.

Group of orthologs #2655. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 D.pseudoobscura:190

F6WAB5              	100.00%		Q294W4              	100.00%
Bootstrap support for F6WAB5 as seed ortholog is 100%.
Bootstrap support for Q294W4 as seed ortholog is 100%.

Group of orthologs #2656. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:190

F6WQJ1              	100.00%		Q293X1              	100.00%
Bootstrap support for F6WQJ1 as seed ortholog is 100%.
Bootstrap support for Q293X1 as seed ortholog is 100%.

Group of orthologs #2657. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 D.pseudoobscura:190

F6YFR8              	100.00%		Q292Z9              	100.00%
Bootstrap support for F6YFR8 as seed ortholog is 100%.
Bootstrap support for Q292Z9 as seed ortholog is 100%.

Group of orthologs #2658. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 D.pseudoobscura:89

F6VH27              	100.00%		Q29G96              	100.00%
Bootstrap support for F6VH27 as seed ortholog is 96%.
Bootstrap support for Q29G96 as seed ortholog is 99%.

Group of orthologs #2659. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 D.pseudoobscura:87

F6X073              	100.00%		Q29EH4              	100.00%
Bootstrap support for F6X073 as seed ortholog is 100%.
Bootstrap support for Q29EH4 as seed ortholog is 100%.

Group of orthologs #2660. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 D.pseudoobscura:190

F7A4P8              	100.00%		Q298W0              	100.00%
Bootstrap support for F7A4P8 as seed ortholog is 100%.
Bootstrap support for Q298W0 as seed ortholog is 100%.

Group of orthologs #2661. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 D.pseudoobscura:190

F6XWK4              	100.00%		Q29M05              	100.00%
Bootstrap support for F6XWK4 as seed ortholog is 100%.
Bootstrap support for Q29M05 as seed ortholog is 100%.

Group of orthologs #2662. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 D.pseudoobscura:190

H2XPR5              	100.00%		Q293T3              	100.00%
Bootstrap support for H2XPR5 as seed ortholog is 100%.
Bootstrap support for Q293T3 as seed ortholog is 100%.

Group of orthologs #2663. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 D.pseudoobscura:190

F6WW79              	100.00%		Q2LZ64              	100.00%
Bootstrap support for F6WW79 as seed ortholog is 100%.
Bootstrap support for Q2LZ64 as seed ortholog is 100%.

Group of orthologs #2664. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 D.pseudoobscura:190

H2XPF4              	100.00%		Q29HA7              	100.00%
Bootstrap support for H2XPF4 as seed ortholog is 100%.
Bootstrap support for Q29HA7 as seed ortholog is 100%.

Group of orthologs #2665. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 D.pseudoobscura:145

F7ART8              	100.00%		Q2M184              	100.00%
Bootstrap support for F7ART8 as seed ortholog is 99%.
Bootstrap support for Q2M184 as seed ortholog is 99%.

Group of orthologs #2666. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 D.pseudoobscura:190

H2XNA5              	100.00%		Q2M1A0              	100.00%
Bootstrap support for H2XNA5 as seed ortholog is 100%.
Bootstrap support for Q2M1A0 as seed ortholog is 100%.

Group of orthologs #2667. Best score 190 bits
Score difference with first non-orthologous sequence - C.intestinalis:190 D.pseudoobscura:190

H2XZ71              	100.00%		Q29K66              	100.00%
Bootstrap support for H2XZ71 as seed ortholog is 100%.
Bootstrap support for Q29K66 as seed ortholog is 100%.

Group of orthologs #2668. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 D.pseudoobscura:189

F6Y6P2              	100.00%		Q29JT4              	100.00%
                    	       		Q28Z44              	17.72%
                    	       		Q291T4              	9.73%
                    	       		B5DZT9              	9.28%
Bootstrap support for F6Y6P2 as seed ortholog is 94%.
Bootstrap support for Q29JT4 as seed ortholog is 100%.

Group of orthologs #2669. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 D.pseudoobscura:189

F6WSV3              	100.00%		Q292F8              	100.00%
                    	       		Q290Q1              	72.59%
                    	       		B5E0G7              	70.85%
Bootstrap support for F6WSV3 as seed ortholog is 100%.
Bootstrap support for Q292F8 as seed ortholog is 100%.

Group of orthologs #2670. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 D.pseudoobscura:33

F6XEB9              	100.00%		Q297T5              	100.00%
F6U351              	15.95%		
Bootstrap support for F6XEB9 as seed ortholog is 96%.
Bootstrap support for Q297T5 as seed ortholog is 82%.

Group of orthologs #2671. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 D.pseudoobscura:189

F6Q7X0              	100.00%		B5E1A4              	100.00%
Bootstrap support for F6Q7X0 as seed ortholog is 100%.
Bootstrap support for B5E1A4 as seed ortholog is 100%.

Group of orthologs #2672. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 D.pseudoobscura:189

H2XRE1              	100.00%		B5DLE6              	100.00%
Bootstrap support for H2XRE1 as seed ortholog is 100%.
Bootstrap support for B5DLE6 as seed ortholog is 100%.

Group of orthologs #2673. Best score 189 bits
Score difference with first non-orthologous sequence - C.intestinalis:189 D.pseudoobscura:189

H2Y0H4              	100.00%		B5DSJ8              	100.00%
Bootstrap support for H2Y0H4 as seed ortholog is 100%.
Bootstrap support for B5DSJ8 as seed ortholog is 100%.

Group of orthologs #2674. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 D.pseudoobscura:188

F6WIN9              	100.00%		Q299H2              	100.00%
                    	       		I5AP65              	41.13%
Bootstrap support for F6WIN9 as seed ortholog is 100%.
Bootstrap support for Q299H2 as seed ortholog is 100%.

Group of orthologs #2675. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 D.pseudoobscura:91

H2Y197              	100.00%		Q29MT6              	100.00%
                    	       		B5DJK5              	28.95%
Bootstrap support for H2Y197 as seed ortholog is 100%.
Bootstrap support for Q29MT6 as seed ortholog is 99%.

Group of orthologs #2676. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 D.pseudoobscura:188

F6WH15              	100.00%		Q290H1              	100.00%
Bootstrap support for F6WH15 as seed ortholog is 100%.
Bootstrap support for Q290H1 as seed ortholog is 100%.

Group of orthologs #2677. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 D.pseudoobscura:143

F6U3F2              	100.00%		Q29FI5              	100.00%
Bootstrap support for F6U3F2 as seed ortholog is 100%.
Bootstrap support for Q29FI5 as seed ortholog is 100%.

Group of orthologs #2678. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 D.pseudoobscura:188

F6SFW9              	100.00%		Q29MG0              	100.00%
Bootstrap support for F6SFW9 as seed ortholog is 90%.
Bootstrap support for Q29MG0 as seed ortholog is 100%.

Group of orthologs #2679. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 D.pseudoobscura:188

H2Y3K2              	100.00%		B5DP05              	100.00%
Bootstrap support for H2Y3K2 as seed ortholog is 100%.
Bootstrap support for B5DP05 as seed ortholog is 100%.

Group of orthologs #2680. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 D.pseudoobscura:23

F7AG96              	100.00%		Q29I13              	100.00%
Bootstrap support for F7AG96 as seed ortholog is 98%.
Bootstrap support for Q29I13 as seed ortholog is 88%.

Group of orthologs #2681. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 D.pseudoobscura:125

H2XNY0              	100.00%		Q29IG7              	100.00%
Bootstrap support for H2XNY0 as seed ortholog is 100%.
Bootstrap support for Q29IG7 as seed ortholog is 99%.

Group of orthologs #2682. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 D.pseudoobscura:188

H2XJQ7              	100.00%		Q2LZM6              	100.00%
Bootstrap support for H2XJQ7 as seed ortholog is 100%.
Bootstrap support for Q2LZM6 as seed ortholog is 100%.

Group of orthologs #2683. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 D.pseudoobscura:84

H2XNN6              	100.00%		Q2LZP3              	100.00%
Bootstrap support for H2XNN6 as seed ortholog is 99%.
Bootstrap support for Q2LZP3 as seed ortholog is 99%.

Group of orthologs #2684. Best score 188 bits
Score difference with first non-orthologous sequence - C.intestinalis:188 D.pseudoobscura:123

H2XSQ8              	100.00%		Q29P96              	100.00%
Bootstrap support for H2XSQ8 as seed ortholog is 100%.
Bootstrap support for Q29P96 as seed ortholog is 100%.

Group of orthologs #2685. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:98

H2XVW6              	100.00%		B5DM92              	100.00%
                    	       		Q29HP2              	36.34%
Bootstrap support for H2XVW6 as seed ortholog is 99%.
Bootstrap support for B5DM92 as seed ortholog is 96%.

Group of orthologs #2686. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 D.pseudoobscura:187

F6WIP7              	100.00%		Q292F9              	100.00%
Bootstrap support for F6WIP7 as seed ortholog is 100%.
Bootstrap support for Q292F9 as seed ortholog is 100%.

Group of orthologs #2687. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 D.pseudoobscura:187

F6YBL5              	100.00%		Q293K7              	100.00%
Bootstrap support for F6YBL5 as seed ortholog is 99%.
Bootstrap support for Q293K7 as seed ortholog is 100%.

Group of orthologs #2688. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:187 D.pseudoobscura:36

F6Z8S6              	100.00%		Q2LYI7              	100.00%
Bootstrap support for F6Z8S6 as seed ortholog is 100%.
Bootstrap support for Q2LYI7 as seed ortholog is 99%.

Group of orthologs #2689. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 D.pseudoobscura:120

F7AM07              	100.00%		Q29MS4              	100.00%
Bootstrap support for F7AM07 as seed ortholog is 100%.
Bootstrap support for Q29MS4 as seed ortholog is 100%.

Group of orthologs #2690. Best score 187 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:143

H2XZK6              	100.00%		Q295P6              	100.00%
Bootstrap support for H2XZK6 as seed ortholog is 99%.
Bootstrap support for Q295P6 as seed ortholog is 99%.

Group of orthologs #2691. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 D.pseudoobscura:26

H2XYR8              	100.00%		Q290I1              	100.00%
F6T1L5              	16.70%		B5DWA8              	60.51%
H2XW85              	15.46%		Q294N5              	51.22%
F6ZUI8              	13.09%		Q294P1              	34.39%
                    	       		Q294P3              	34.08%
                    	       		B5DWA6              	33.57%
                    	       		Q294P4              	32.35%
                    	       		Q294P0              	26.43%
                    	       		Q294N6              	24.90%
                    	       		B5DWA7              	24.18%
                    	       		Q294N9              	20.61%
                    	       		Q294N7              	19.29%
                    	       		Q29BQ2              	11.02%
                    	       		B5E041              	9.90%
                    	       		Q29G93              	5.92%
Bootstrap support for H2XYR8 as seed ortholog is 86%.
Bootstrap support for Q290I1 as seed ortholog is 69%.
Alternative seed ortholog is B5DZ85 (26 bits away from this cluster)

Group of orthologs #2692. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:51

F6QE09              	100.00%		B5DUR3              	100.00%
F6RLS6              	17.46%		
Bootstrap support for F6QE09 as seed ortholog is 99%.
Bootstrap support for B5DUR3 as seed ortholog is 97%.

Group of orthologs #2693. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:186

F7ANZ8              	100.00%		Q29EQ1              	100.00%
                    	       		I5AMV1              	65.89%
Bootstrap support for F7ANZ8 as seed ortholog is 100%.
Bootstrap support for Q29EQ1 as seed ortholog is 100%.

Group of orthologs #2694. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:186

F6R213              	100.00%		B5DVT2              	100.00%
Bootstrap support for F6R213 as seed ortholog is 100%.
Bootstrap support for B5DVT2 as seed ortholog is 100%.

Group of orthologs #2695. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:95

F6Q8X5              	100.00%		Q293H6              	100.00%
Bootstrap support for F6Q8X5 as seed ortholog is 100%.
Bootstrap support for Q293H6 as seed ortholog is 99%.

Group of orthologs #2696. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:186

F6R0P0              	100.00%		Q299D5              	100.00%
Bootstrap support for F6R0P0 as seed ortholog is 100%.
Bootstrap support for Q299D5 as seed ortholog is 100%.

Group of orthologs #2697. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 D.pseudoobscura:186

F6SL18              	100.00%		Q294V4              	100.00%
Bootstrap support for F6SL18 as seed ortholog is 99%.
Bootstrap support for Q294V4 as seed ortholog is 100%.

Group of orthologs #2698. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:186

F6WII1              	100.00%		I5ANI6              	100.00%
Bootstrap support for F6WII1 as seed ortholog is 100%.
Bootstrap support for I5ANI6 as seed ortholog is 100%.

Group of orthologs #2699. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:186

F6XNG1              	100.00%		Q28XC1              	100.00%
Bootstrap support for F6XNG1 as seed ortholog is 100%.
Bootstrap support for Q28XC1 as seed ortholog is 100%.

Group of orthologs #2700. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:186

F6XG50              	100.00%		Q299C5              	100.00%
Bootstrap support for F6XG50 as seed ortholog is 100%.
Bootstrap support for Q299C5 as seed ortholog is 100%.

Group of orthologs #2701. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:186

F7BB49              	100.00%		Q291F8              	100.00%
Bootstrap support for F7BB49 as seed ortholog is 100%.
Bootstrap support for Q291F8 as seed ortholog is 100%.

Group of orthologs #2702. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:186

F6ZQG8              	100.00%		Q298J9              	100.00%
Bootstrap support for F6ZQG8 as seed ortholog is 100%.
Bootstrap support for Q298J9 as seed ortholog is 100%.

Group of orthologs #2703. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:186

F6UI12              	100.00%		Q2M170              	100.00%
Bootstrap support for F6UI12 as seed ortholog is 100%.
Bootstrap support for Q2M170 as seed ortholog is 100%.

Group of orthologs #2704. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:186

H2XQQ0              	100.00%		Q290H2              	100.00%
Bootstrap support for H2XQQ0 as seed ortholog is 100%.
Bootstrap support for Q290H2 as seed ortholog is 100%.

Group of orthologs #2705. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:55

F7B3P4              	100.00%		Q29CY5              	100.00%
Bootstrap support for F7B3P4 as seed ortholog is 100%.
Bootstrap support for Q29CY5 as seed ortholog is 85%.

Group of orthologs #2706. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 D.pseudoobscura:186

H2XX04              	100.00%		Q28XE1              	100.00%
Bootstrap support for H2XX04 as seed ortholog is 100%.
Bootstrap support for Q28XE1 as seed ortholog is 100%.

Group of orthologs #2707. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:186

H2Y3G2              	100.00%		Q293G2              	100.00%
Bootstrap support for H2Y3G2 as seed ortholog is 100%.
Bootstrap support for Q293G2 as seed ortholog is 100%.

Group of orthologs #2708. Best score 186 bits
Score difference with first non-orthologous sequence - C.intestinalis:186 D.pseudoobscura:186

I6L2C8              	100.00%		Q2LZI9              	100.00%
Bootstrap support for I6L2C8 as seed ortholog is 100%.
Bootstrap support for Q2LZI9 as seed ortholog is 100%.

Group of orthologs #2709. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 D.pseudoobscura:185

F6S9I2              	100.00%		Q295W5              	100.00%
Bootstrap support for F6S9I2 as seed ortholog is 100%.
Bootstrap support for Q295W5 as seed ortholog is 100%.

Group of orthologs #2710. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 D.pseudoobscura:185

F6S4Y6              	100.00%		Q296L8              	100.00%
Bootstrap support for F6S4Y6 as seed ortholog is 100%.
Bootstrap support for Q296L8 as seed ortholog is 100%.

Group of orthologs #2711. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 D.pseudoobscura:185

F6X4A0              	100.00%		Q29AN2              	100.00%
Bootstrap support for F6X4A0 as seed ortholog is 100%.
Bootstrap support for Q29AN2 as seed ortholog is 100%.

Group of orthologs #2712. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 D.pseudoobscura:185

F6WHB0              	100.00%		Q29IR6              	100.00%
Bootstrap support for F6WHB0 as seed ortholog is 100%.
Bootstrap support for Q29IR6 as seed ortholog is 100%.

Group of orthologs #2713. Best score 185 bits
Score difference with first non-orthologous sequence - C.intestinalis:185 D.pseudoobscura:99

F6XQ02              	100.00%		Q29I93              	100.00%
Bootstrap support for F6XQ02 as seed ortholog is 100%.
Bootstrap support for Q29I93 as seed ortholog is 99%.

Group of orthologs #2714. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 D.pseudoobscura:184

F6U497              	100.00%		B5DLY6              	100.00%
Bootstrap support for F6U497 as seed ortholog is 100%.
Bootstrap support for B5DLY6 as seed ortholog is 100%.

Group of orthologs #2715. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 D.pseudoobscura:184

F6U8F3              	100.00%		B5DPD7              	100.00%
Bootstrap support for F6U8F3 as seed ortholog is 100%.
Bootstrap support for B5DPD7 as seed ortholog is 100%.

Group of orthologs #2716. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 D.pseudoobscura:184

F6SVM4              	100.00%		Q292B6              	100.00%
Bootstrap support for F6SVM4 as seed ortholog is 100%.
Bootstrap support for Q292B6 as seed ortholog is 100%.

Group of orthologs #2717. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 D.pseudoobscura:138

F6XEJ6              	100.00%		Q28XI6              	100.00%
Bootstrap support for F6XEJ6 as seed ortholog is 100%.
Bootstrap support for Q28XI6 as seed ortholog is 100%.

Group of orthologs #2718. Best score 184 bits
Score difference with first non-orthologous sequence - C.intestinalis:184 D.pseudoobscura:184

F6XML9              	100.00%		Q29D03              	100.00%
Bootstrap support for F6XML9 as seed ortholog is 100%.
Bootstrap support for Q29D03 as seed ortholog is 100%.

Group of orthologs #2719. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 D.pseudoobscura:183

H2XX41              	100.00%		B5DH74              	100.00%
                    	       		B5DH73              	49.15%
Bootstrap support for H2XX41 as seed ortholog is 100%.
Bootstrap support for B5DH74 as seed ortholog is 100%.

Group of orthologs #2720. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 D.pseudoobscura:110

F6RR57              	100.00%		B5DZ74              	100.00%
Bootstrap support for F6RR57 as seed ortholog is 100%.
Bootstrap support for B5DZ74 as seed ortholog is 98%.

Group of orthologs #2721. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 D.pseudoobscura:183

F6SK91              	100.00%		Q290Q8              	100.00%
Bootstrap support for F6SK91 as seed ortholog is 100%.
Bootstrap support for Q290Q8 as seed ortholog is 100%.

Group of orthologs #2722. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 D.pseudoobscura:62

F6RLP1              	100.00%		Q29F30              	100.00%
Bootstrap support for F6RLP1 as seed ortholog is 100%.
Bootstrap support for Q29F30 as seed ortholog is 96%.

Group of orthologs #2723. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 D.pseudoobscura:183

F6VKW3              	100.00%		Q295F8              	100.00%
Bootstrap support for F6VKW3 as seed ortholog is 100%.
Bootstrap support for Q295F8 as seed ortholog is 100%.

Group of orthologs #2724. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 D.pseudoobscura:183

F7BDK3              	100.00%		B5E0G6              	100.00%
Bootstrap support for F7BDK3 as seed ortholog is 100%.
Bootstrap support for B5E0G6 as seed ortholog is 100%.

Group of orthologs #2725. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 D.pseudoobscura:183

H2XP71              	100.00%		Q29DR8              	100.00%
Bootstrap support for H2XP71 as seed ortholog is 100%.
Bootstrap support for Q29DR8 as seed ortholog is 100%.

Group of orthologs #2726. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 D.pseudoobscura:183

H2XT04              	100.00%		Q299T6              	100.00%
Bootstrap support for H2XT04 as seed ortholog is 100%.
Bootstrap support for Q299T6 as seed ortholog is 100%.

Group of orthologs #2727. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 D.pseudoobscura:68

F7AAH4              	100.00%		Q2LYT6              	100.00%
Bootstrap support for F7AAH4 as seed ortholog is 100%.
Bootstrap support for Q2LYT6 as seed ortholog is 99%.

Group of orthologs #2728. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 D.pseudoobscura:183

F7AWW1              	100.00%		Q2LZL8              	100.00%
Bootstrap support for F7AWW1 as seed ortholog is 100%.
Bootstrap support for Q2LZL8 as seed ortholog is 100%.

Group of orthologs #2729. Best score 183 bits
Score difference with first non-orthologous sequence - C.intestinalis:183 D.pseudoobscura:183

H2XWQ2              	100.00%		Q29FC9              	100.00%
Bootstrap support for H2XWQ2 as seed ortholog is 100%.
Bootstrap support for Q29FC9 as seed ortholog is 100%.

Group of orthologs #2730. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 D.pseudoobscura:88

F6Q484              	100.00%		B5DV51              	100.00%
                    	       		Q29IT8              	93.89%
                    	       		Q298M9              	18.32%
Bootstrap support for F6Q484 as seed ortholog is 100%.
Bootstrap support for B5DV51 as seed ortholog is 99%.

Group of orthologs #2731. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 D.pseudoobscura:182

H2XQA6              	100.00%		B5E191              	100.00%
Bootstrap support for H2XQA6 as seed ortholog is 100%.
Bootstrap support for B5E191 as seed ortholog is 100%.

Group of orthologs #2732. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 D.pseudoobscura:182

H2XP91              	100.00%		Q295V5              	100.00%
Bootstrap support for H2XP91 as seed ortholog is 100%.
Bootstrap support for Q295V5 as seed ortholog is 100%.

Group of orthologs #2733. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 D.pseudoobscura:182

F7AES2              	100.00%		Q29GN4              	100.00%
Bootstrap support for F7AES2 as seed ortholog is 100%.
Bootstrap support for Q29GN4 as seed ortholog is 100%.

Group of orthologs #2734. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 D.pseudoobscura:182

F6XTQ1              	100.00%		Q29P85              	100.00%
Bootstrap support for F6XTQ1 as seed ortholog is 100%.
Bootstrap support for Q29P85 as seed ortholog is 100%.

Group of orthologs #2735. Best score 182 bits
Score difference with first non-orthologous sequence - C.intestinalis:182 D.pseudoobscura:182

F7BK44              	100.00%		Q29IV5              	100.00%
Bootstrap support for F7BK44 as seed ortholog is 100%.
Bootstrap support for Q29IV5 as seed ortholog is 100%.

Group of orthologs #2736. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 D.pseudoobscura:181

H2XSH7              	100.00%		Q29NE3              	100.00%
                    	       		B5DJ49              	60.99%
                    	       		B5DJ48              	33.52%
Bootstrap support for H2XSH7 as seed ortholog is 100%.
Bootstrap support for Q29NE3 as seed ortholog is 100%.

Group of orthologs #2737. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 D.pseudoobscura:181

F6TJR3              	100.00%		Q29KK7              	100.00%
F7AV79              	14.77%		
Bootstrap support for F6TJR3 as seed ortholog is 75%.
Bootstrap support for Q29KK7 as seed ortholog is 100%.

Group of orthologs #2738. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 D.pseudoobscura:106

F6RT01              	100.00%		B5DWG8              	100.00%
Bootstrap support for F6RT01 as seed ortholog is 100%.
Bootstrap support for B5DWG8 as seed ortholog is 99%.

Group of orthologs #2739. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 D.pseudoobscura:181

F6SFB8              	100.00%		B5E1A0              	100.00%
Bootstrap support for F6SFB8 as seed ortholog is 100%.
Bootstrap support for B5E1A0 as seed ortholog is 100%.

Group of orthologs #2740. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 D.pseudoobscura:181

F6WWW9              	100.00%		Q28WT6              	100.00%
Bootstrap support for F6WWW9 as seed ortholog is 100%.
Bootstrap support for Q28WT6 as seed ortholog is 100%.

Group of orthologs #2741. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 D.pseudoobscura:181

F6RMR3              	100.00%		Q29EJ8              	100.00%
Bootstrap support for F6RMR3 as seed ortholog is 100%.
Bootstrap support for Q29EJ8 as seed ortholog is 100%.

Group of orthologs #2742. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 D.pseudoobscura:181

F6SCR3              	100.00%		Q29NC9              	100.00%
Bootstrap support for F6SCR3 as seed ortholog is 100%.
Bootstrap support for Q29NC9 as seed ortholog is 100%.

Group of orthologs #2743. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:10

Q2PEE1              	100.00%		B5DN78              	100.00%
Bootstrap support for Q2PEE1 as seed ortholog is 100%.
Bootstrap support for B5DN78 as seed ortholog is 87%.

Group of orthologs #2744. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 D.pseudoobscura:98

F7API1              	100.00%		Q29CH0              	100.00%
Bootstrap support for F7API1 as seed ortholog is 99%.
Bootstrap support for Q29CH0 as seed ortholog is 99%.

Group of orthologs #2745. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 D.pseudoobscura:98

F6VN10              	100.00%		Q2M0R6              	100.00%
Bootstrap support for F6VN10 as seed ortholog is 100%.
Bootstrap support for Q2M0R6 as seed ortholog is 99%.

Group of orthologs #2746. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 D.pseudoobscura:181

Q2PEE2              	100.00%		B5DUV7              	100.00%
Bootstrap support for Q2PEE2 as seed ortholog is 100%.
Bootstrap support for B5DUV7 as seed ortholog is 100%.

Group of orthologs #2747. Best score 181 bits
Score difference with first non-orthologous sequence - C.intestinalis:181 D.pseudoobscura:181

H2XKM5              	100.00%		Q29MR4              	100.00%
Bootstrap support for H2XKM5 as seed ortholog is 100%.
Bootstrap support for Q29MR4 as seed ortholog is 100%.

Group of orthologs #2748. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:83

F6Z897              	100.00%		B5DNF9              	100.00%
                    	       		B5DY38              	83.33%
Bootstrap support for F6Z897 as seed ortholog is 100%.
Bootstrap support for B5DNF9 as seed ortholog is 100%.

Group of orthologs #2749. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:180

F6PKF9              	100.00%		Q29CW6              	100.00%
F6U922              	9.15%		
Bootstrap support for F6PKF9 as seed ortholog is 100%.
Bootstrap support for Q29CW6 as seed ortholog is 100%.

Group of orthologs #2750. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 D.pseudoobscura:108

F6TXM9              	100.00%		Q295T9              	100.00%
                    	       		B5DYD2              	58.90%
Bootstrap support for F6TXM9 as seed ortholog is 99%.
Bootstrap support for Q295T9 as seed ortholog is 99%.

Group of orthologs #2751. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:180

F6ZMG2              	100.00%		Q29EV8              	100.00%
F6XNX3              	56.35%		
Bootstrap support for F6ZMG2 as seed ortholog is 100%.
Bootstrap support for Q29EV8 as seed ortholog is 100%.

Group of orthologs #2752. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:180

F6Q9P1              	100.00%		Q28YH0              	100.00%
Bootstrap support for F6Q9P1 as seed ortholog is 100%.
Bootstrap support for Q28YH0 as seed ortholog is 100%.

Group of orthologs #2753. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:180

F6RP59              	100.00%		Q29F61              	100.00%
Bootstrap support for F6RP59 as seed ortholog is 100%.
Bootstrap support for Q29F61 as seed ortholog is 100%.

Group of orthologs #2754. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:180

F6T120              	100.00%		Q29DA0              	100.00%
Bootstrap support for F6T120 as seed ortholog is 100%.
Bootstrap support for Q29DA0 as seed ortholog is 100%.

Group of orthologs #2755. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:94

F6RQ08              	100.00%		Q29GT9              	100.00%
Bootstrap support for F6RQ08 as seed ortholog is 100%.
Bootstrap support for Q29GT9 as seed ortholog is 99%.

Group of orthologs #2756. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:180

F6WPK3              	100.00%		Q29JJ7              	100.00%
Bootstrap support for F6WPK3 as seed ortholog is 100%.
Bootstrap support for Q29JJ7 as seed ortholog is 100%.

Group of orthologs #2757. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:180

F6XCL4              	100.00%		Q29KM5              	100.00%
Bootstrap support for F6XCL4 as seed ortholog is 100%.
Bootstrap support for Q29KM5 as seed ortholog is 100%.

Group of orthologs #2758. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:180

H2XR58              	100.00%		Q293K8              	100.00%
Bootstrap support for H2XR58 as seed ortholog is 100%.
Bootstrap support for Q293K8 as seed ortholog is 100%.

Group of orthologs #2759. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:180

H2XU15              	100.00%		Q299C8              	100.00%
Bootstrap support for H2XU15 as seed ortholog is 100%.
Bootstrap support for Q299C8 as seed ortholog is 100%.

Group of orthologs #2760. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:180

H2XX64              	100.00%		Q29F66              	100.00%
Bootstrap support for H2XX64 as seed ortholog is 100%.
Bootstrap support for Q29F66 as seed ortholog is 100%.

Group of orthologs #2761. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:180

H2XU65              	100.00%		Q29LQ3              	100.00%
Bootstrap support for H2XU65 as seed ortholog is 100%.
Bootstrap support for Q29LQ3 as seed ortholog is 100%.

Group of orthologs #2762. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:180

H2XYP3              	100.00%		Q29IC2              	100.00%
Bootstrap support for H2XYP3 as seed ortholog is 100%.
Bootstrap support for Q29IC2 as seed ortholog is 100%.

Group of orthologs #2763. Best score 180 bits
Score difference with first non-orthologous sequence - C.intestinalis:180 D.pseudoobscura:180

H2XZL8              	100.00%		Q2M0K6              	100.00%
Bootstrap support for H2XZL8 as seed ortholog is 100%.
Bootstrap support for Q2M0K6 as seed ortholog is 100%.

Group of orthologs #2764. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 D.pseudoobscura:81

F6ZTL8              	100.00%		B5DIN7              	100.00%
F6VRW9              	6.31%		Q29M24              	5.29%
Bootstrap support for F6ZTL8 as seed ortholog is 100%.
Bootstrap support for B5DIN7 as seed ortholog is 99%.

Group of orthologs #2765. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 D.pseudoobscura:89

F6WH38              	100.00%		Q291F9              	100.00%
                    	       		B5DQP9              	14.71%
Bootstrap support for F6WH38 as seed ortholog is 100%.
Bootstrap support for Q291F9 as seed ortholog is 98%.

Group of orthologs #2766. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 D.pseudoobscura:179

F6VT35              	100.00%		Q29F32              	100.00%
F6VT42              	100.00%		
Bootstrap support for F6VT35 as seed ortholog is 87%.
Bootstrap support for F6VT42 as seed ortholog is 76%.
Bootstrap support for Q29F32 as seed ortholog is 100%.

Group of orthologs #2767. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 D.pseudoobscura:179

F6QPH0              	100.00%		I7M3J1              	100.00%
Bootstrap support for F6QPH0 as seed ortholog is 100%.
Bootstrap support for I7M3J1 as seed ortholog is 100%.

Group of orthologs #2768. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 D.pseudoobscura:77

F6RYU3              	100.00%		Q28ZV9              	100.00%
Bootstrap support for F6RYU3 as seed ortholog is 96%.
Bootstrap support for Q28ZV9 as seed ortholog is 99%.

Group of orthologs #2769. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 D.pseudoobscura:179

F6UXU4              	100.00%		Q293E5              	100.00%
Bootstrap support for F6UXU4 as seed ortholog is 100%.
Bootstrap support for Q293E5 as seed ortholog is 100%.

Group of orthologs #2770. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 D.pseudoobscura:179

F6U899              	100.00%		Q29CB8              	100.00%
Bootstrap support for F6U899 as seed ortholog is 100%.
Bootstrap support for Q29CB8 as seed ortholog is 100%.

Group of orthologs #2771. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 D.pseudoobscura:179

F6Z599              	100.00%		Q28ZM0              	100.00%
Bootstrap support for F6Z599 as seed ortholog is 100%.
Bootstrap support for Q28ZM0 as seed ortholog is 100%.

Group of orthologs #2772. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 D.pseudoobscura:179

F6Z3S0              	100.00%		Q294L6              	100.00%
Bootstrap support for F6Z3S0 as seed ortholog is 100%.
Bootstrap support for Q294L6 as seed ortholog is 100%.

Group of orthologs #2773. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 D.pseudoobscura:179

F7BK02              	100.00%		Q294Q8              	100.00%
Bootstrap support for F7BK02 as seed ortholog is 100%.
Bootstrap support for Q294Q8 as seed ortholog is 100%.

Group of orthologs #2774. Best score 179 bits
Score difference with first non-orthologous sequence - C.intestinalis:179 D.pseudoobscura:179

H2XL84              	100.00%		Q29J37              	100.00%
Bootstrap support for H2XL84 as seed ortholog is 100%.
Bootstrap support for Q29J37 as seed ortholog is 100%.

Group of orthologs #2775. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 D.pseudoobscura:52

F6UJX7              	100.00%		B5DZK6              	100.00%
F6UAK1              	53.99%		B5DKC5              	8.94%
F6WBD4              	51.26%		
F6T4X9              	50.42%		
H2XZP0              	12.18%		
H2XM24              	8.40%		
Bootstrap support for F6UJX7 as seed ortholog is 77%.
Bootstrap support for B5DZK6 as seed ortholog is 92%.

Group of orthologs #2776. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 D.pseudoobscura:178

F6PI87              	100.00%		B5DP67              	100.00%
                    	       		B5DRW7              	64.95%
Bootstrap support for F6PI87 as seed ortholog is 100%.
Bootstrap support for B5DP67 as seed ortholog is 100%.

Group of orthologs #2777. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 D.pseudoobscura:50

F6TVE9              	100.00%		B5DI02              	100.00%
Bootstrap support for F6TVE9 as seed ortholog is 85%.
Bootstrap support for B5DI02 as seed ortholog is 83%.

Group of orthologs #2778. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 D.pseudoobscura:178

F6SD85              	100.00%		B5DPQ9              	100.00%
Bootstrap support for F6SD85 as seed ortholog is 100%.
Bootstrap support for B5DPQ9 as seed ortholog is 100%.

Group of orthologs #2779. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 D.pseudoobscura:178

F6YP38              	100.00%		B5DIJ4              	100.00%
Bootstrap support for F6YP38 as seed ortholog is 100%.
Bootstrap support for B5DIJ4 as seed ortholog is 100%.

Group of orthologs #2780. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 D.pseudoobscura:55

F7BD99              	100.00%		B5DJK1              	100.00%
Bootstrap support for F7BD99 as seed ortholog is 84%.
Bootstrap support for B5DJK1 as seed ortholog is 95%.

Group of orthologs #2781. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 D.pseudoobscura:178

F6QEZ7              	100.00%		Q29CA4              	100.00%
Bootstrap support for F6QEZ7 as seed ortholog is 100%.
Bootstrap support for Q29CA4 as seed ortholog is 100%.

Group of orthologs #2782. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 D.pseudoobscura:178

F6X4K3              	100.00%		Q296B0              	100.00%
Bootstrap support for F6X4K3 as seed ortholog is 100%.
Bootstrap support for Q296B0 as seed ortholog is 100%.

Group of orthologs #2783. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 D.pseudoobscura:58

H2XUA2              	100.00%		B5E0N9              	100.00%
Bootstrap support for H2XUA2 as seed ortholog is 100%.
Bootstrap support for B5E0N9 as seed ortholog is 94%.

Group of orthologs #2784. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 D.pseudoobscura:178

F6X2R6              	100.00%		Q29NE8              	100.00%
Bootstrap support for F6X2R6 as seed ortholog is 100%.
Bootstrap support for Q29NE8 as seed ortholog is 100%.

Group of orthologs #2785. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 D.pseudoobscura:52

F7BJS1              	100.00%		Q29DZ2              	100.00%
Bootstrap support for F7BJS1 as seed ortholog is 98%.
Bootstrap support for Q29DZ2 as seed ortholog is 83%.

Group of orthologs #2786. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 D.pseudoobscura:178

H2XZJ6              	100.00%		Q28ZA6              	100.00%
Bootstrap support for H2XZJ6 as seed ortholog is 100%.
Bootstrap support for Q28ZA6 as seed ortholog is 100%.

Group of orthologs #2787. Best score 178 bits
Score difference with first non-orthologous sequence - C.intestinalis:178 D.pseudoobscura:178

F6ZU45              	100.00%		Q2LZ81              	100.00%
Bootstrap support for F6ZU45 as seed ortholog is 100%.
Bootstrap support for Q2LZ81 as seed ortholog is 100%.

Group of orthologs #2788. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 D.pseudoobscura:38

F6ZMJ7              	100.00%		B5DVW6              	100.00%
                    	       		B5DJL9              	35.56%
                    	       		B5DY55              	10.56%
Bootstrap support for F6ZMJ7 as seed ortholog is 100%.
Bootstrap support for B5DVW6 as seed ortholog is 96%.

Group of orthologs #2789. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 D.pseudoobscura:85

H2XMQ5              	100.00%		Q29D49              	100.00%
F6S6I4              	14.32%		
Bootstrap support for H2XMQ5 as seed ortholog is 99%.
Bootstrap support for Q29D49 as seed ortholog is 99%.

Group of orthologs #2790. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 D.pseudoobscura:177

H2XP92              	100.00%		B5DR62              	100.00%
Bootstrap support for H2XP92 as seed ortholog is 100%.
Bootstrap support for B5DR62 as seed ortholog is 100%.

Group of orthologs #2791. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 D.pseudoobscura:177

F6TAD8              	100.00%		Q29GM7              	100.00%
Bootstrap support for F6TAD8 as seed ortholog is 100%.
Bootstrap support for Q29GM7 as seed ortholog is 100%.

Group of orthologs #2792. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 D.pseudoobscura:177

F6Z0V4              	100.00%		Q292J2              	100.00%
Bootstrap support for F6Z0V4 as seed ortholog is 100%.
Bootstrap support for Q292J2 as seed ortholog is 100%.

Group of orthologs #2793. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:98

F7A1W8              	100.00%		Q29HE8              	100.00%
Bootstrap support for F7A1W8 as seed ortholog is 99%.
Bootstrap support for Q29HE8 as seed ortholog is 99%.

Group of orthologs #2794. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 D.pseudoobscura:177

F6ZDT1              	100.00%		Q2M084              	100.00%
Bootstrap support for F6ZDT1 as seed ortholog is 99%.
Bootstrap support for Q2M084 as seed ortholog is 100%.

Group of orthologs #2795. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 D.pseudoobscura:177

F6ZC01              	100.00%		Q2M0W3              	100.00%
Bootstrap support for F6ZC01 as seed ortholog is 100%.
Bootstrap support for Q2M0W3 as seed ortholog is 100%.

Group of orthologs #2796. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 D.pseudoobscura:177

H2XQF1              	100.00%		Q2LZP7              	100.00%
Bootstrap support for H2XQF1 as seed ortholog is 100%.
Bootstrap support for Q2LZP7 as seed ortholog is 100%.

Group of orthologs #2797. Best score 177 bits
Score difference with first non-orthologous sequence - C.intestinalis:177 D.pseudoobscura:6

H2Y0A0              	100.00%		Q95086              	100.00%
Bootstrap support for H2Y0A0 as seed ortholog is 100%.
Bootstrap support for Q95086 as seed ortholog is 59%.
Alternative seed ortholog is Q28Y99 (6 bits away from this cluster)

Group of orthologs #2798. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 D.pseudoobscura:176

F6S5L9              	100.00%		Q29EU0              	100.00%
Bootstrap support for F6S5L9 as seed ortholog is 100%.
Bootstrap support for Q29EU0 as seed ortholog is 100%.

Group of orthologs #2799. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 D.pseudoobscura:176

F6QW72              	100.00%		Q2LZA9              	100.00%
Bootstrap support for F6QW72 as seed ortholog is 100%.
Bootstrap support for Q2LZA9 as seed ortholog is 100%.

Group of orthologs #2800. Best score 176 bits
Score difference with first non-orthologous sequence - C.intestinalis:176 D.pseudoobscura:176

H2XME2              	100.00%		Q29P70              	100.00%
Bootstrap support for H2XME2 as seed ortholog is 100%.
Bootstrap support for Q29P70 as seed ortholog is 100%.

Group of orthologs #2801. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 D.pseudoobscura:175

F6VV86              	100.00%		B5E0V9              	100.00%
                    	       		Q29GF5              	10.96%
Bootstrap support for F6VV86 as seed ortholog is 100%.
Bootstrap support for B5E0V9 as seed ortholog is 100%.

Group of orthologs #2802. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 D.pseudoobscura:90

F6SS10              	100.00%		Q29D80              	100.00%
                    	       		Q29D81              	5.41%
Bootstrap support for F6SS10 as seed ortholog is 88%.
Bootstrap support for Q29D80 as seed ortholog is 99%.

Group of orthologs #2803. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 D.pseudoobscura:175

F6TI55              	100.00%		Q295C0              	100.00%
Bootstrap support for F6TI55 as seed ortholog is 100%.
Bootstrap support for Q295C0 as seed ortholog is 100%.

Group of orthologs #2804. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 D.pseudoobscura:175

H2XLJ6              	100.00%		B5DNA1              	100.00%
Bootstrap support for H2XLJ6 as seed ortholog is 100%.
Bootstrap support for B5DNA1 as seed ortholog is 100%.

Group of orthologs #2805. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 D.pseudoobscura:175

F6XWZ8              	100.00%		Q296W2              	100.00%
Bootstrap support for F6XWZ8 as seed ortholog is 100%.
Bootstrap support for Q296W2 as seed ortholog is 100%.

Group of orthologs #2806. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 D.pseudoobscura:129

F6R982              	100.00%		Q29PP9              	100.00%
Bootstrap support for F6R982 as seed ortholog is 100%.
Bootstrap support for Q29PP9 as seed ortholog is 99%.

Group of orthologs #2807. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 D.pseudoobscura:175

F6PYG2              	100.00%		Q2M1D7              	100.00%
Bootstrap support for F6PYG2 as seed ortholog is 100%.
Bootstrap support for Q2M1D7 as seed ortholog is 100%.

Group of orthologs #2808. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 D.pseudoobscura:175

F6TQR9              	100.00%		Q2M160              	100.00%
Bootstrap support for F6TQR9 as seed ortholog is 100%.
Bootstrap support for Q2M160 as seed ortholog is 100%.

Group of orthologs #2809. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 D.pseudoobscura:175

F7AXI1              	100.00%		Q29JC8              	100.00%
Bootstrap support for F7AXI1 as seed ortholog is 100%.
Bootstrap support for Q29JC8 as seed ortholog is 100%.

Group of orthologs #2810. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 D.pseudoobscura:73

F6ZPY9              	100.00%		Q2LZA0              	100.00%
Bootstrap support for F6ZPY9 as seed ortholog is 74%.
Alternative seed ortholog is F6Q9D5 (32 bits away from this cluster)
Bootstrap support for Q2LZA0 as seed ortholog is 95%.

Group of orthologs #2811. Best score 175 bits
Score difference with first non-orthologous sequence - C.intestinalis:175 D.pseudoobscura:175

H2XSZ1              	100.00%		Q2M0N7              	100.00%
Bootstrap support for H2XSZ1 as seed ortholog is 100%.
Bootstrap support for Q2M0N7 as seed ortholog is 100%.

Group of orthologs #2812. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 D.pseudoobscura:33

H2Y099              	100.00%		Q28XR0              	100.00%
H2Y3J7              	42.54%		Q28XQ4              	19.79%
H2XNM8              	15.89%		Q29LA1              	14.41%
                    	       		Q2LZS9              	12.67%
Bootstrap support for H2Y099 as seed ortholog is 68%.
Alternative seed ortholog is F7AJY7 (17 bits away from this cluster)
Bootstrap support for Q28XR0 as seed ortholog is 81%.

Group of orthologs #2813. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 D.pseudoobscura:174

F6QTI2              	100.00%		Q28ZD5              	100.00%
Bootstrap support for F6QTI2 as seed ortholog is 100%.
Bootstrap support for Q28ZD5 as seed ortholog is 100%.

Group of orthologs #2814. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 D.pseudoobscura:115

F6Y2V8              	100.00%		Q295F1              	100.00%
Bootstrap support for F6Y2V8 as seed ortholog is 99%.
Bootstrap support for Q295F1 as seed ortholog is 99%.

Group of orthologs #2815. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 D.pseudoobscura:174

F6WCU4              	100.00%		Q29K85              	100.00%
Bootstrap support for F6WCU4 as seed ortholog is 100%.
Bootstrap support for Q29K85 as seed ortholog is 100%.

Group of orthologs #2816. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 D.pseudoobscura:174

H2Y3S7              	100.00%		B5DQ99              	100.00%
Bootstrap support for H2Y3S7 as seed ortholog is 100%.
Bootstrap support for B5DQ99 as seed ortholog is 100%.

Group of orthologs #2817. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 D.pseudoobscura:174

F7AEJ4              	100.00%		Q29LV8              	100.00%
Bootstrap support for F7AEJ4 as seed ortholog is 100%.
Bootstrap support for Q29LV8 as seed ortholog is 100%.

Group of orthologs #2818. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 D.pseudoobscura:78

F7B5N7              	100.00%		Q2LYJ6              	100.00%
Bootstrap support for F7B5N7 as seed ortholog is 99%.
Bootstrap support for Q2LYJ6 as seed ortholog is 98%.

Group of orthologs #2819. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 D.pseudoobscura:174

H2XY06              	100.00%		Q29CW1              	100.00%
Bootstrap support for H2XY06 as seed ortholog is 100%.
Bootstrap support for Q29CW1 as seed ortholog is 100%.

Group of orthologs #2820. Best score 174 bits
Score difference with first non-orthologous sequence - C.intestinalis:174 D.pseudoobscura:174

Q4H3N7              	100.00%		Q29CW9              	100.00%
Bootstrap support for Q4H3N7 as seed ortholog is 100%.
Bootstrap support for Q29CW9 as seed ortholog is 100%.

Group of orthologs #2821. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 D.pseudoobscura:31

F6RZT0              	100.00%		B5DZQ0              	100.00%
                    	       		Q28ZE5              	67.11%
Bootstrap support for F6RZT0 as seed ortholog is 96%.
Bootstrap support for B5DZQ0 as seed ortholog is 81%.

Group of orthologs #2822. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 D.pseudoobscura:69

F6SAA4              	100.00%		Q291I0              	100.00%
Bootstrap support for F6SAA4 as seed ortholog is 100%.
Bootstrap support for Q291I0 as seed ortholog is 99%.

Group of orthologs #2823. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 D.pseudoobscura:173

F6X3L7              	100.00%		Q29J96              	100.00%
Bootstrap support for F6X3L7 as seed ortholog is 100%.
Bootstrap support for Q29J96 as seed ortholog is 100%.

Group of orthologs #2824. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 D.pseudoobscura:131

H2XNX1              	100.00%		Q28ZR4              	100.00%
Bootstrap support for H2XNX1 as seed ortholog is 70%.
Alternative seed ortholog is H2XXW6 (14 bits away from this cluster)
Bootstrap support for Q28ZR4 as seed ortholog is 100%.

Group of orthologs #2825. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 D.pseudoobscura:173

H2XSI3              	100.00%		Q29F91              	100.00%
Bootstrap support for H2XSI3 as seed ortholog is 100%.
Bootstrap support for Q29F91 as seed ortholog is 100%.

Group of orthologs #2826. Best score 173 bits
Score difference with first non-orthologous sequence - C.intestinalis:173 D.pseudoobscura:173

H2Y013              	100.00%		Q29FL1              	100.00%
Bootstrap support for H2Y013 as seed ortholog is 100%.
Bootstrap support for Q29FL1 as seed ortholog is 100%.

Group of orthologs #2827. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 D.pseudoobscura:172

H2XX32              	100.00%		Q29NA9              	100.00%
Q7YXB3              	47.78%		
Q4VYB1              	21.18%		
H2XWV8              	20.94%		
H2XK38              	18.72%		
F6ZVY0              	18.47%		
H2XTR7              	18.23%		
F7BPJ6              	14.53%		
Bootstrap support for H2XX32 as seed ortholog is 100%.
Bootstrap support for Q29NA9 as seed ortholog is 100%.

Group of orthologs #2828. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 D.pseudoobscura:33

F6S021              	100.00%		Q29M81              	100.00%
F6YNR2              	11.25%		Q2LYP3              	8.73%
                    	       		Q2LYP4              	7.74%
Bootstrap support for F6S021 as seed ortholog is 100%.
Bootstrap support for Q29M81 as seed ortholog is 81%.

Group of orthologs #2829. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 D.pseudoobscura:49

F6XIJ2              	100.00%		Q29P20              	100.00%
Q869J2              	18.34%		
F6XIM3              	17.94%		
D2KZ69              	5.94%		
Bootstrap support for F6XIJ2 as seed ortholog is 98%.
Bootstrap support for Q29P20 as seed ortholog is 90%.

Group of orthologs #2830. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 D.pseudoobscura:65

F7AEU0              	100.00%		Q29H75              	100.00%
Q8T880              	99.24%		
Bootstrap support for F7AEU0 as seed ortholog is 100%.
Bootstrap support for Q29H75 as seed ortholog is 85%.

Group of orthologs #2831. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 D.pseudoobscura:172

F6Q548              	100.00%		Q28ZC2              	100.00%
Bootstrap support for F6Q548 as seed ortholog is 100%.
Bootstrap support for Q28ZC2 as seed ortholog is 100%.

Group of orthologs #2832. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 D.pseudoobscura:172

F6T065              	100.00%		Q29F64              	100.00%
Bootstrap support for F6T065 as seed ortholog is 100%.
Bootstrap support for Q29F64 as seed ortholog is 100%.

Group of orthologs #2833. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 D.pseudoobscura:172

F6WCC6              	100.00%		Q29H72              	100.00%
Bootstrap support for F6WCC6 as seed ortholog is 100%.
Bootstrap support for Q29H72 as seed ortholog is 100%.

Group of orthologs #2834. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 D.pseudoobscura:172

H2XUW3              	100.00%		B5DX65              	100.00%
Bootstrap support for H2XUW3 as seed ortholog is 100%.
Bootstrap support for B5DX65 as seed ortholog is 100%.

Group of orthologs #2835. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 D.pseudoobscura:172

F6ZLL7              	100.00%		Q29KG9              	100.00%
Bootstrap support for F6ZLL7 as seed ortholog is 100%.
Bootstrap support for Q29KG9 as seed ortholog is 100%.

Group of orthologs #2836. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 D.pseudoobscura:172

H2Y3J4              	100.00%		Q294L0              	100.00%
Bootstrap support for H2Y3J4 as seed ortholog is 100%.
Bootstrap support for Q294L0 as seed ortholog is 100%.

Group of orthologs #2837. Best score 172 bits
Score difference with first non-orthologous sequence - C.intestinalis:172 D.pseudoobscura:172

H2XYG3              	100.00%		Q29DC3              	100.00%
Bootstrap support for H2XYG3 as seed ortholog is 100%.
Bootstrap support for Q29DC3 as seed ortholog is 100%.

Group of orthologs #2838. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 D.pseudoobscura:171

H2Y2Q4              	100.00%		Q2M0L1              	100.00%
                    	       		Q2M0L2              	27.04%
                    	       		Q2M0K9              	5.10%
Bootstrap support for H2Y2Q4 as seed ortholog is 100%.
Bootstrap support for Q2M0L1 as seed ortholog is 100%.

Group of orthologs #2839. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 D.pseudoobscura:118

F6SPH4              	100.00%		Q28ZB8              	100.00%
Bootstrap support for F6SPH4 as seed ortholog is 100%.
Bootstrap support for Q28ZB8 as seed ortholog is 100%.

Group of orthologs #2840. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 D.pseudoobscura:171

F6PXX9              	100.00%		Q29CC4              	100.00%
Bootstrap support for F6PXX9 as seed ortholog is 100%.
Bootstrap support for Q29CC4 as seed ortholog is 100%.

Group of orthologs #2841. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 D.pseudoobscura:171

F6TNN0              	100.00%		Q29A57              	100.00%
Bootstrap support for F6TNN0 as seed ortholog is 100%.
Bootstrap support for Q29A57 as seed ortholog is 100%.

Group of orthologs #2842. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 D.pseudoobscura:171

F6U1Q3              	100.00%		Q29L90              	100.00%
Bootstrap support for F6U1Q3 as seed ortholog is 100%.
Bootstrap support for Q29L90 as seed ortholog is 100%.

Group of orthologs #2843. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 D.pseudoobscura:171

F6ZBY5              	100.00%		Q29GW1              	100.00%
Bootstrap support for F6ZBY5 as seed ortholog is 100%.
Bootstrap support for Q29GW1 as seed ortholog is 100%.

Group of orthologs #2844. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 D.pseudoobscura:171

F6ZXN3              	100.00%		Q29NM3              	100.00%
Bootstrap support for F6ZXN3 as seed ortholog is 100%.
Bootstrap support for Q29NM3 as seed ortholog is 100%.

Group of orthologs #2845. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 D.pseudoobscura:23

H2XXZ1              	100.00%		Q29GR5              	100.00%
Bootstrap support for H2XXZ1 as seed ortholog is 100%.
Bootstrap support for Q29GR5 as seed ortholog is 94%.

Group of orthologs #2846. Best score 171 bits
Score difference with first non-orthologous sequence - C.intestinalis:171 D.pseudoobscura:171

Q4H2P0              	100.00%		Q29AA6              	100.00%
Bootstrap support for Q4H2P0 as seed ortholog is 100%.
Bootstrap support for Q29AA6 as seed ortholog is 100%.

Group of orthologs #2847. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 D.pseudoobscura:170

H2XNP3              	100.00%		B5DXD0              	100.00%
                    	       		B5DTM9              	99.22%
Bootstrap support for H2XNP3 as seed ortholog is 100%.
Bootstrap support for B5DXD0 as seed ortholog is 100%.

Group of orthologs #2848. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 D.pseudoobscura:170

F6TSS8              	100.00%		Q291L3              	100.00%
Bootstrap support for F6TSS8 as seed ortholog is 100%.
Bootstrap support for Q291L3 as seed ortholog is 100%.

Group of orthologs #2849. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 D.pseudoobscura:44

F6TJ37              	100.00%		Q297N9              	100.00%
Bootstrap support for F6TJ37 as seed ortholog is 90%.
Bootstrap support for Q297N9 as seed ortholog is 85%.

Group of orthologs #2850. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 D.pseudoobscura:170

F6RG08              	100.00%		Q2M0Z7              	100.00%
Bootstrap support for F6RG08 as seed ortholog is 100%.
Bootstrap support for Q2M0Z7 as seed ortholog is 100%.

Group of orthologs #2851. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 D.pseudoobscura:170

F6SAX8              	100.00%		Q2M0C0              	100.00%
Bootstrap support for F6SAX8 as seed ortholog is 100%.
Bootstrap support for Q2M0C0 as seed ortholog is 100%.

Group of orthologs #2852. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 D.pseudoobscura:170

F6YS62              	100.00%		Q29EP5              	100.00%
Bootstrap support for F6YS62 as seed ortholog is 100%.
Bootstrap support for Q29EP5 as seed ortholog is 100%.

Group of orthologs #2853. Best score 170 bits
Score difference with first non-orthologous sequence - C.intestinalis:170 D.pseudoobscura:170

H2XJU8              	100.00%		Q29NF3              	100.00%
Bootstrap support for H2XJU8 as seed ortholog is 100%.
Bootstrap support for Q29NF3 as seed ortholog is 100%.

Group of orthologs #2854. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 D.pseudoobscura:169

H2XND0              	100.00%		B5DYQ2              	100.00%
F7B2P5              	26.70%		
H2XR57              	17.18%		
F7BKP7              	15.97%		
F7ABQ9              	15.32%		
H2XKW4              	14.88%		
H2XKG9              	14.88%		
F7AT69              	14.44%		
H2Y0P5              	14.44%		
F7BL24              	14.33%		
H2Y257              	13.89%		
F6PUY5              	11.27%		
F6YU08              	11.16%		
F6XSI6              	10.39%		
Bootstrap support for H2XND0 as seed ortholog is 43%.
Alternative seed ortholog is H2XZ79 (6 bits away from this cluster)
Bootstrap support for B5DYQ2 as seed ortholog is 100%.

Group of orthologs #2855. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 D.pseudoobscura:50

F6UN42              	100.00%		Q298U7              	100.00%
                    	       		Q298U6              	14.05%
                    	       		Q298A7              	12.43%
                    	       		Q29L73              	7.57%
                    	       		Q298A8              	6.49%
Bootstrap support for F6UN42 as seed ortholog is 100%.
Bootstrap support for Q298U7 as seed ortholog is 97%.

Group of orthologs #2856. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 D.pseudoobscura:36

F6QHU8              	100.00%		Q29DF3              	100.00%
F6XHV4              	44.92%		
Bootstrap support for F6QHU8 as seed ortholog is 70%.
Alternative seed ortholog is F6XTS5 (18 bits away from this cluster)
Bootstrap support for Q29DF3 as seed ortholog is 85%.

Group of orthologs #2857. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 D.pseudoobscura:169

F6WBC7              	100.00%		B5DPA5              	100.00%
Bootstrap support for F6WBC7 as seed ortholog is 100%.
Bootstrap support for B5DPA5 as seed ortholog is 100%.

Group of orthologs #2858. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 D.pseudoobscura:169

F6W7Q3              	100.00%		Q28Y16              	100.00%
Bootstrap support for F6W7Q3 as seed ortholog is 100%.
Bootstrap support for Q28Y16 as seed ortholog is 100%.

Group of orthologs #2859. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 D.pseudoobscura:169

F6YLW1              	100.00%		B5E0B4              	100.00%
Bootstrap support for F6YLW1 as seed ortholog is 100%.
Bootstrap support for B5E0B4 as seed ortholog is 100%.

Group of orthologs #2860. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 D.pseudoobscura:169

F6VJL7              	100.00%		Q295M3              	100.00%
Bootstrap support for F6VJL7 as seed ortholog is 100%.
Bootstrap support for Q295M3 as seed ortholog is 100%.

Group of orthologs #2861. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 D.pseudoobscura:169

H2XVJ7              	100.00%		B5DXD5              	100.00%
Bootstrap support for H2XVJ7 as seed ortholog is 100%.
Bootstrap support for B5DXD5 as seed ortholog is 100%.

Group of orthologs #2862. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 D.pseudoobscura:169

H2XLK9              	100.00%		Q29BE4              	100.00%
Bootstrap support for H2XLK9 as seed ortholog is 100%.
Bootstrap support for Q29BE4 as seed ortholog is 100%.

Group of orthologs #2863. Best score 169 bits
Score difference with first non-orthologous sequence - C.intestinalis:169 D.pseudoobscura:169

F6ZD22              	100.00%		Q2LZQ8              	100.00%
Bootstrap support for F6ZD22 as seed ortholog is 100%.
Bootstrap support for Q2LZQ8 as seed ortholog is 100%.

Group of orthologs #2864. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 D.pseudoobscura:7

F6UWG2              	100.00%		Q29MC6              	23.77%
F6WT44              	100.00%		Q29JR8              	100.00%
F6VJ33              	56.36%		B5E0C8              	6.83%
F7BHL3              	27.17%		B5E0C7              	6.83%
                    	       		Q28Y23              	5.46%
                    	       		Q28Y24              	5.19%
Bootstrap support for F6UWG2 as seed ortholog is 74%.
Alternative seed ortholog is F6V6U3 (24 bits away from this cluster)
Bootstrap support for F6WT44 as seed ortholog is 73%.
Alternative seed ortholog is F6V6U3 (24 bits away from this cluster)
Bootstrap support for Q29JR8 as seed ortholog is 60%.
Alternative seed ortholog is Q28Y25 (7 bits away from this cluster)

Group of orthologs #2865. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:168

F6XBY1              	100.00%		B5DPL7              	100.00%
                    	       		Q2LZV3              	73.07%
Bootstrap support for F6XBY1 as seed ortholog is 99%.
Bootstrap support for B5DPL7 as seed ortholog is 100%.

Group of orthologs #2866. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 D.pseudoobscura:122

F6QN05              	100.00%		B5DX06              	100.00%
Bootstrap support for F6QN05 as seed ortholog is 100%.
Bootstrap support for B5DX06 as seed ortholog is 99%.

Group of orthologs #2867. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 D.pseudoobscura:32

F6VXS0              	100.00%		O44091              	100.00%
Bootstrap support for F6VXS0 as seed ortholog is 100%.
Bootstrap support for O44091 as seed ortholog is 97%.

Group of orthologs #2868. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 D.pseudoobscura:168

F6YVQ1              	100.00%		Q28X08              	100.00%
Bootstrap support for F6YVQ1 as seed ortholog is 100%.
Bootstrap support for Q28X08 as seed ortholog is 100%.

Group of orthologs #2869. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 D.pseudoobscura:168

C4B8X6              	100.00%		Q29MR2              	100.00%
Bootstrap support for C4B8X6 as seed ortholog is 100%.
Bootstrap support for Q29MR2 as seed ortholog is 100%.

Group of orthologs #2870. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 D.pseudoobscura:168

F6SNK4              	100.00%		Q2M186              	100.00%
Bootstrap support for F6SNK4 as seed ortholog is 100%.
Bootstrap support for Q2M186 as seed ortholog is 100%.

Group of orthologs #2871. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 D.pseudoobscura:168

H2XRS9              	100.00%		Q291W5              	100.00%
Bootstrap support for H2XRS9 as seed ortholog is 100%.
Bootstrap support for Q291W5 as seed ortholog is 100%.

Group of orthologs #2872. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 D.pseudoobscura:113

H2XL75              	100.00%		Q29GB5              	100.00%
Bootstrap support for H2XL75 as seed ortholog is 97%.
Bootstrap support for Q29GB5 as seed ortholog is 99%.

Group of orthologs #2873. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 D.pseudoobscura:168

F7B383              	100.00%		Q29NS6              	100.00%
Bootstrap support for F7B383 as seed ortholog is 100%.
Bootstrap support for Q29NS6 as seed ortholog is 100%.

Group of orthologs #2874. Best score 168 bits
Score difference with first non-orthologous sequence - C.intestinalis:168 D.pseudoobscura:168

H2XTD6              	100.00%		Q2LZ83              	100.00%
Bootstrap support for H2XTD6 as seed ortholog is 100%.
Bootstrap support for Q2LZ83 as seed ortholog is 100%.

Group of orthologs #2875. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 D.pseudoobscura:31

H2Y0T8              	100.00%		Q28WM3              	100.00%
H2XLH1              	11.80%		
F6TN85              	10.82%		
H2XRG5              	6.23%		
Bootstrap support for H2Y0T8 as seed ortholog is 87%.
Bootstrap support for Q28WM3 as seed ortholog is 83%.

Group of orthologs #2876. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 D.pseudoobscura:12

H2XNG5              	100.00%		Q29J30              	100.00%
                    	       		B5DVQ0              	5.31%
Bootstrap support for H2XNG5 as seed ortholog is 77%.
Bootstrap support for Q29J30 as seed ortholog is 61%.
Alternative seed ortholog is Q294F7 (12 bits away from this cluster)

Group of orthologs #2877. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 D.pseudoobscura:167

F6QEH8              	100.00%		B5DVG1              	100.00%
Bootstrap support for F6QEH8 as seed ortholog is 100%.
Bootstrap support for B5DVG1 as seed ortholog is 100%.

Group of orthologs #2878. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 D.pseudoobscura:167

F6T047              	100.00%		Q293R2              	100.00%
Bootstrap support for F6T047 as seed ortholog is 100%.
Bootstrap support for Q293R2 as seed ortholog is 100%.

Group of orthologs #2879. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 D.pseudoobscura:46

F6XMT9              	100.00%		Q28WW6              	100.00%
Bootstrap support for F6XMT9 as seed ortholog is 99%.
Bootstrap support for Q28WW6 as seed ortholog is 96%.

Group of orthologs #2880. Best score 167 bits
Score difference with first non-orthologous sequence - C.intestinalis:167 D.pseudoobscura:167

F6UM67              	100.00%		Q29DT8              	100.00%
Bootstrap support for F6UM67 as seed ortholog is 100%.
Bootstrap support for Q29DT8 as seed ortholog is 100%.

Group of orthologs #2881. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 D.pseudoobscura:38

F6W7N8              	100.00%		B5DIR4              	100.00%
                    	       		B5DLY8              	63.71%
                    	       		B5DIR9              	21.98%
Bootstrap support for F6W7N8 as seed ortholog is 100%.
Bootstrap support for B5DIR4 as seed ortholog is 75%.

Group of orthologs #2882. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 D.pseudoobscura:27

F7A7T2              	100.00%		Q293A9              	100.00%
Bootstrap support for F7A7T2 as seed ortholog is 95%.
Bootstrap support for Q293A9 as seed ortholog is 84%.

Group of orthologs #2883. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 D.pseudoobscura:166

F7BMD5              	100.00%		Q296J7              	100.00%
Bootstrap support for F7BMD5 as seed ortholog is 100%.
Bootstrap support for Q296J7 as seed ortholog is 100%.

Group of orthologs #2884. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 D.pseudoobscura:166

F6WBQ8              	100.00%		Q29ML3              	100.00%
Bootstrap support for F6WBQ8 as seed ortholog is 100%.
Bootstrap support for Q29ML3 as seed ortholog is 100%.

Group of orthologs #2885. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 D.pseudoobscura:166

F6XJ18              	100.00%		Q2M1B7              	100.00%
Bootstrap support for F6XJ18 as seed ortholog is 100%.
Bootstrap support for Q2M1B7 as seed ortholog is 100%.

Group of orthologs #2886. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 D.pseudoobscura:21

H2XK44              	100.00%		Q29GQ7              	100.00%
Bootstrap support for H2XK44 as seed ortholog is 100%.
Bootstrap support for Q29GQ7 as seed ortholog is 86%.

Group of orthologs #2887. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 D.pseudoobscura:166

H2Y184              	100.00%		Q290Q2              	100.00%
Bootstrap support for H2Y184 as seed ortholog is 100%.
Bootstrap support for Q290Q2 as seed ortholog is 100%.

Group of orthologs #2888. Best score 166 bits
Score difference with first non-orthologous sequence - C.intestinalis:166 D.pseudoobscura:166

F7B8L3              	100.00%		Q2LZZ8              	100.00%
Bootstrap support for F7B8L3 as seed ortholog is 100%.
Bootstrap support for Q2LZZ8 as seed ortholog is 100%.

Group of orthologs #2889. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 D.pseudoobscura:165

F6XI54              	100.00%		I5ANZ8              	100.00%
F6XI39              	31.84%		
F6YNN5              	27.70%		
F6XI46              	27.45%		
F6Y4I3              	16.98%		
Bootstrap support for F6XI54 as seed ortholog is 100%.
Bootstrap support for I5ANZ8 as seed ortholog is 100%.

Group of orthologs #2890. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 D.pseudoobscura:165

H2XPE3              	100.00%		B5DIX7              	100.00%
                    	       		B5DIX8              	88.98%
Bootstrap support for H2XPE3 as seed ortholog is 100%.
Bootstrap support for B5DIX7 as seed ortholog is 100%.

Group of orthologs #2891. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 D.pseudoobscura:165

F6QB35              	100.00%		O44218              	100.00%
Bootstrap support for F6QB35 as seed ortholog is 100%.
Bootstrap support for O44218 as seed ortholog is 100%.

Group of orthologs #2892. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 D.pseudoobscura:165

F6XV81              	100.00%		Q28YR0              	100.00%
Bootstrap support for F6XV81 as seed ortholog is 100%.
Bootstrap support for Q28YR0 as seed ortholog is 100%.

Group of orthologs #2893. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 D.pseudoobscura:165

F6YM31              	100.00%		Q28XC9              	100.00%
Bootstrap support for F6YM31 as seed ortholog is 100%.
Bootstrap support for Q28XC9 as seed ortholog is 100%.

Group of orthologs #2894. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 D.pseudoobscura:165

F6ZJ82              	100.00%		Q29FC7              	100.00%
Bootstrap support for F6ZJ82 as seed ortholog is 100%.
Bootstrap support for Q29FC7 as seed ortholog is 100%.

Group of orthologs #2895. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:165 D.pseudoobscura:165

F6YB21              	100.00%		Q29MN8              	100.00%
Bootstrap support for F6YB21 as seed ortholog is 100%.
Bootstrap support for Q29MN8 as seed ortholog is 100%.

Group of orthologs #2896. Best score 165 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 D.pseudoobscura:96

Q8T893              	100.00%		Q29IP4              	100.00%
Bootstrap support for Q8T893 as seed ortholog is 99%.
Bootstrap support for Q29IP4 as seed ortholog is 99%.

Group of orthologs #2897. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 D.pseudoobscura:26

H2XYP0              	100.00%		I5ANF8              	100.00%
F6S801              	5.65%		B5DS62              	59.64%
                    	       		Q29K97              	13.76%
                    	       		Q29K96              	7.32%
Bootstrap support for H2XYP0 as seed ortholog is 100%.
Bootstrap support for I5ANF8 as seed ortholog is 18%.
Alternative seed ortholog is Q29KB2 (26 bits away from this cluster)

Group of orthologs #2898. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 D.pseudoobscura:60

F6V7G7              	100.00%		B5DWP4              	100.00%
                    	       		B5DR49              	82.54%
                    	       		B5DMF7              	73.02%
Bootstrap support for F6V7G7 as seed ortholog is 100%.
Bootstrap support for B5DWP4 as seed ortholog is 99%.

Group of orthologs #2899. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 D.pseudoobscura:164

F7AHQ4              	100.00%		B5DY00              	100.00%
Bootstrap support for F7AHQ4 as seed ortholog is 100%.
Bootstrap support for B5DY00 as seed ortholog is 100%.

Group of orthologs #2900. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 D.pseudoobscura:77

F7A491              	100.00%		Q28XN1              	100.00%
Bootstrap support for F7A491 as seed ortholog is 77%.
Bootstrap support for Q28XN1 as seed ortholog is 99%.

Group of orthologs #2901. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 D.pseudoobscura:108

F6UUF9              	100.00%		Q29EM6              	100.00%
Bootstrap support for F6UUF9 as seed ortholog is 100%.
Bootstrap support for Q29EM6 as seed ortholog is 99%.

Group of orthologs #2902. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 D.pseudoobscura:164

H2Y0X5              	100.00%		B5DX67              	100.00%
Bootstrap support for H2Y0X5 as seed ortholog is 100%.
Bootstrap support for B5DX67 as seed ortholog is 100%.

Group of orthologs #2903. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 D.pseudoobscura:164

H2XR59              	100.00%		Q298Q7              	100.00%
Bootstrap support for H2XR59 as seed ortholog is 100%.
Bootstrap support for Q298Q7 as seed ortholog is 100%.

Group of orthologs #2904. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 D.pseudoobscura:164

F6ZIA7              	100.00%		Q2LZJ0              	100.00%
Bootstrap support for F6ZIA7 as seed ortholog is 100%.
Bootstrap support for Q2LZJ0 as seed ortholog is 100%.

Group of orthologs #2905. Best score 164 bits
Score difference with first non-orthologous sequence - C.intestinalis:164 D.pseudoobscura:164

H2Y2E7              	100.00%		Q29KH1              	100.00%
Bootstrap support for H2Y2E7 as seed ortholog is 100%.
Bootstrap support for Q29KH1 as seed ortholog is 100%.

Group of orthologs #2906. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 D.pseudoobscura:46

F6WXY4              	100.00%		Q28XQ9              	100.00%
                    	       		I5AP59              	10.21%
Bootstrap support for F6WXY4 as seed ortholog is 63%.
Alternative seed ortholog is F6V6U3 (13 bits away from this cluster)
Bootstrap support for Q28XQ9 as seed ortholog is 90%.

Group of orthologs #2907. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:72

F6YB82              	100.00%		I5AMP6              	100.00%
H2Y1W9              	6.34%		
Bootstrap support for F6YB82 as seed ortholog is 99%.
Bootstrap support for I5AMP6 as seed ortholog is 95%.

Group of orthologs #2908. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:81

F6RGJ1              	100.00%		Q29II3              	100.00%
                    	       		Q29MH6              	5.15%
Bootstrap support for F6RGJ1 as seed ortholog is 99%.
Bootstrap support for Q29II3 as seed ortholog is 99%.

Group of orthologs #2909. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 D.pseudoobscura:87

F6V0W8              	100.00%		Q29JH4              	100.00%
                    	       		B5DIY1              	58.97%
Bootstrap support for F6V0W8 as seed ortholog is 93%.
Bootstrap support for Q29JH4 as seed ortholog is 99%.

Group of orthologs #2910. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 D.pseudoobscura:163

F6PWH7              	100.00%		B5DYL2              	100.00%
Bootstrap support for F6PWH7 as seed ortholog is 100%.
Bootstrap support for B5DYL2 as seed ortholog is 100%.

Group of orthologs #2911. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 D.pseudoobscura:163

F6QRZ2              	100.00%		B5DYA7              	100.00%
Bootstrap support for F6QRZ2 as seed ortholog is 100%.
Bootstrap support for B5DYA7 as seed ortholog is 100%.

Group of orthologs #2912. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 D.pseudoobscura:163

F6YY07              	100.00%		B5DXU2              	100.00%
Bootstrap support for F6YY07 as seed ortholog is 100%.
Bootstrap support for B5DXU2 as seed ortholog is 100%.

Group of orthologs #2913. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 D.pseudoobscura:31

F6Q162              	100.00%		Q2M165              	100.00%
Bootstrap support for F6Q162 as seed ortholog is 65%.
Alternative seed ortholog is F6V6U3 (13 bits away from this cluster)
Bootstrap support for Q2M165 as seed ortholog is 79%.

Group of orthologs #2914. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 D.pseudoobscura:163

F6W6Z3              	100.00%		Q29NI7              	100.00%
Bootstrap support for F6W6Z3 as seed ortholog is 100%.
Bootstrap support for Q29NI7 as seed ortholog is 100%.

Group of orthologs #2915. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 D.pseudoobscura:92

F6ZN60              	100.00%		Q29ND7              	100.00%
Bootstrap support for F6ZN60 as seed ortholog is 100%.
Bootstrap support for Q29ND7 as seed ortholog is 99%.

Group of orthologs #2916. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 D.pseudoobscura:163

F6ZIQ8              	100.00%		Q2M0P4              	100.00%
Bootstrap support for F6ZIQ8 as seed ortholog is 100%.
Bootstrap support for Q2M0P4 as seed ortholog is 100%.

Group of orthologs #2917. Best score 163 bits
Score difference with first non-orthologous sequence - C.intestinalis:163 D.pseudoobscura:163

H2XPM9              	100.00%		Q2LYX7              	100.00%
Bootstrap support for H2XPM9 as seed ortholog is 100%.
Bootstrap support for Q2LYX7 as seed ortholog is 100%.

Group of orthologs #2918. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 D.pseudoobscura:162

H2Y222              	100.00%		Q28ZC9              	100.00%
H2XJS6              	100.00%		Q290S1              	100.00%
Bootstrap support for H2Y222 as seed ortholog is 100%.
Bootstrap support for H2XJS6 as seed ortholog is 100%.
Bootstrap support for Q28ZC9 as seed ortholog is 100%.
Bootstrap support for Q290S1 as seed ortholog is 100%.

Group of orthologs #2919. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 D.pseudoobscura:93

F6PZN7              	100.00%		Q29AU0              	100.00%
                    	       		Q29AX0              	21.17%
Bootstrap support for F6PZN7 as seed ortholog is 95%.
Bootstrap support for Q29AU0 as seed ortholog is 99%.

Group of orthologs #2920. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 D.pseudoobscura:162

F7AWE3              	100.00%		Q29GV8              	100.00%
Bootstrap support for F7AWE3 as seed ortholog is 100%.
Bootstrap support for Q29GV8 as seed ortholog is 100%.

Group of orthologs #2921. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 D.pseudoobscura:162

F7AI05              	100.00%		Q29IT3              	100.00%
Bootstrap support for F7AI05 as seed ortholog is 100%.
Bootstrap support for Q29IT3 as seed ortholog is 100%.

Group of orthologs #2922. Best score 162 bits
Score difference with first non-orthologous sequence - C.intestinalis:162 D.pseudoobscura:120

H2XV14              	100.00%		Q29BB1              	100.00%
Bootstrap support for H2XV14 as seed ortholog is 100%.
Bootstrap support for Q29BB1 as seed ortholog is 99%.

Group of orthologs #2923. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 D.pseudoobscura:161

F6ZAE1              	100.00%		Q29HM5              	100.00%
                    	       		Q29CB3              	10.71%
Bootstrap support for F6ZAE1 as seed ortholog is 99%.
Bootstrap support for Q29HM5 as seed ortholog is 100%.

Group of orthologs #2924. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 D.pseudoobscura:161

H2XR40              	100.00%		Q29EY5              	100.00%
                    	       		B5DIZ4              	69.84%
Bootstrap support for H2XR40 as seed ortholog is 100%.
Bootstrap support for Q29EY5 as seed ortholog is 100%.

Group of orthologs #2925. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 D.pseudoobscura:161

F6RNX9              	100.00%		B5DU69              	100.00%
Bootstrap support for F6RNX9 as seed ortholog is 100%.
Bootstrap support for B5DU69 as seed ortholog is 100%.

Group of orthologs #2926. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 D.pseudoobscura:161

F6R2C6              	100.00%		B5DWZ7              	100.00%
Bootstrap support for F6R2C6 as seed ortholog is 100%.
Bootstrap support for B5DWZ7 as seed ortholog is 100%.

Group of orthologs #2927. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 D.pseudoobscura:161

F6PHN6              	100.00%		Q29HF1              	100.00%
Bootstrap support for F6PHN6 as seed ortholog is 100%.
Bootstrap support for Q29HF1 as seed ortholog is 100%.

Group of orthologs #2928. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 D.pseudoobscura:161

C4B8X5              	100.00%		Q29L46              	100.00%
Bootstrap support for C4B8X5 as seed ortholog is 100%.
Bootstrap support for Q29L46 as seed ortholog is 100%.

Group of orthologs #2929. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 D.pseudoobscura:82

F6W872              	100.00%		Q29A92              	100.00%
Bootstrap support for F6W872 as seed ortholog is 99%.
Bootstrap support for Q29A92 as seed ortholog is 99%.

Group of orthologs #2930. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 D.pseudoobscura:161

F7B9T1              	100.00%		Q293S9              	100.00%
Bootstrap support for F7B9T1 as seed ortholog is 100%.
Bootstrap support for Q293S9 as seed ortholog is 100%.

Group of orthologs #2931. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 D.pseudoobscura:161

F6X3A0              	100.00%		Q29HE9              	100.00%
Bootstrap support for F6X3A0 as seed ortholog is 100%.
Bootstrap support for Q29HE9 as seed ortholog is 100%.

Group of orthologs #2932. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 D.pseudoobscura:161

F7AMY5              	100.00%		Q29BD6              	100.00%
Bootstrap support for F7AMY5 as seed ortholog is 100%.
Bootstrap support for Q29BD6 as seed ortholog is 100%.

Group of orthologs #2933. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 D.pseudoobscura:161

F7A3E4              	100.00%		Q29D62              	100.00%
Bootstrap support for F7A3E4 as seed ortholog is 100%.
Bootstrap support for Q29D62 as seed ortholog is 100%.

Group of orthologs #2934. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 D.pseudoobscura:161

H2XWN4              	100.00%		Q299G8              	100.00%
Bootstrap support for H2XWN4 as seed ortholog is 100%.
Bootstrap support for Q299G8 as seed ortholog is 100%.

Group of orthologs #2935. Best score 161 bits
Score difference with first non-orthologous sequence - C.intestinalis:161 D.pseudoobscura:161

Q4H2R5              	100.00%		Q292N9              	100.00%
Bootstrap support for Q4H2R5 as seed ortholog is 100%.
Bootstrap support for Q292N9 as seed ortholog is 100%.

Group of orthologs #2936. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 D.pseudoobscura:54

F6Y3T4              	100.00%		Q29F31              	100.00%
F6Y3U3              	17.25%		
Bootstrap support for F6Y3T4 as seed ortholog is 100%.
Bootstrap support for Q29F31 as seed ortholog is 96%.

Group of orthologs #2937. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 D.pseudoobscura:66

F6WEG7              	100.00%		B5DV79              	100.00%
Bootstrap support for F6WEG7 as seed ortholog is 100%.
Bootstrap support for B5DV79 as seed ortholog is 99%.

Group of orthologs #2938. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 D.pseudoobscura:160

F6R725              	100.00%		Q29NM9              	100.00%
Bootstrap support for F6R725 as seed ortholog is 100%.
Bootstrap support for Q29NM9 as seed ortholog is 100%.

Group of orthologs #2939. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 D.pseudoobscura:160

F6WCM2              	100.00%		Q29CK5              	100.00%
Bootstrap support for F6WCM2 as seed ortholog is 100%.
Bootstrap support for Q29CK5 as seed ortholog is 100%.

Group of orthologs #2940. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 D.pseudoobscura:115

H2XYK8              	100.00%		B5DQ59              	100.00%
Bootstrap support for H2XYK8 as seed ortholog is 100%.
Bootstrap support for B5DQ59 as seed ortholog is 100%.

Group of orthologs #2941. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 D.pseudoobscura:160

H2XPT5              	100.00%		Q28ZQ2              	100.00%
Bootstrap support for H2XPT5 as seed ortholog is 100%.
Bootstrap support for Q28ZQ2 as seed ortholog is 100%.

Group of orthologs #2942. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 D.pseudoobscura:160

H2XLA2              	100.00%		Q297P7              	100.00%
Bootstrap support for H2XLA2 as seed ortholog is 100%.
Bootstrap support for Q297P7 as seed ortholog is 100%.

Group of orthologs #2943. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 D.pseudoobscura:99

F6X6H9              	100.00%		Q29PH8              	100.00%
Bootstrap support for F6X6H9 as seed ortholog is 100%.
Bootstrap support for Q29PH8 as seed ortholog is 99%.

Group of orthologs #2944. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:160 D.pseudoobscura:160

F7AMW5              	100.00%		Q29IR2              	100.00%
Bootstrap support for F7AMW5 as seed ortholog is 100%.
Bootstrap support for Q29IR2 as seed ortholog is 100%.

Group of orthologs #2945. Best score 160 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 D.pseudoobscura:160

F7AX27              	100.00%		Q29KW3              	100.00%
Bootstrap support for F7AX27 as seed ortholog is 49%.
Alternative seed ortholog is H2XW88 (1 bits away from this cluster)
Bootstrap support for Q29KW3 as seed ortholog is 100%.

Group of orthologs #2946. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 D.pseudoobscura:1

F6QIH1              	100.00%		B5DZ61              	100.00%
                    	       		Q2LZ73              	10.27%
Bootstrap support for F6QIH1 as seed ortholog is 100%.
Bootstrap support for B5DZ61 as seed ortholog is 56%.
Alternative seed ortholog is Q291C2 (1 bits away from this cluster)

Group of orthologs #2947. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 D.pseudoobscura:159

F6SJ18              	100.00%		Q29K71              	100.00%
Bootstrap support for F6SJ18 as seed ortholog is 100%.
Bootstrap support for Q29K71 as seed ortholog is 100%.

Group of orthologs #2948. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:159 D.pseudoobscura:159

F7AUU8              	100.00%		Q28ZP6              	100.00%
Bootstrap support for F7AUU8 as seed ortholog is 100%.
Bootstrap support for Q28ZP6 as seed ortholog is 100%.

Group of orthologs #2949. Best score 159 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 D.pseudoobscura:6

H2XPV5              	100.00%		Q29J64              	100.00%
Bootstrap support for H2XPV5 as seed ortholog is 93%.
Bootstrap support for Q29J64 as seed ortholog is 59%.
Alternative seed ortholog is Q29BN6 (6 bits away from this cluster)

Group of orthologs #2950. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 D.pseudoobscura:158

F6S714              	100.00%		B5DHH1              	100.00%
                    	       		B5DHH2              	72.29%
Bootstrap support for F6S714 as seed ortholog is 100%.
Bootstrap support for B5DHH1 as seed ortholog is 100%.

Group of orthologs #2951. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 D.pseudoobscura:158

F6Y1Z7              	100.00%		Q28ZH4              	100.00%
Bootstrap support for F6Y1Z7 as seed ortholog is 100%.
Bootstrap support for Q28ZH4 as seed ortholog is 100%.

Group of orthologs #2952. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 D.pseudoobscura:158

F6YIK6              	100.00%		Q295N0              	100.00%
Bootstrap support for F6YIK6 as seed ortholog is 100%.
Bootstrap support for Q295N0 as seed ortholog is 100%.

Group of orthologs #2953. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:25 D.pseudoobscura:22

F6XAG7              	100.00%		Q29B53              	100.00%
Bootstrap support for F6XAG7 as seed ortholog is 73%.
Alternative seed ortholog is F6XTS5 (25 bits away from this cluster)
Bootstrap support for Q29B53 as seed ortholog is 66%.
Alternative seed ortholog is Q28Y26 (22 bits away from this cluster)

Group of orthologs #2954. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 D.pseudoobscura:158

F6Y4F7              	100.00%		Q29LQ1              	100.00%
Bootstrap support for F6Y4F7 as seed ortholog is 100%.
Bootstrap support for Q29LQ1 as seed ortholog is 100%.

Group of orthologs #2955. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 D.pseudoobscura:89

F7BJW8              	100.00%		Q29DD0              	100.00%
Bootstrap support for F7BJW8 as seed ortholog is 100%.
Bootstrap support for Q29DD0 as seed ortholog is 97%.

Group of orthologs #2956. Best score 158 bits
Score difference with first non-orthologous sequence - C.intestinalis:158 D.pseudoobscura:82

H2XJI9              	100.00%		Q29EE9              	100.00%
Bootstrap support for H2XJI9 as seed ortholog is 100%.
Bootstrap support for Q29EE9 as seed ortholog is 98%.

Group of orthologs #2957. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 D.pseudoobscura:25

F6UMK0              	100.00%		Q28ZD3              	100.00%
                    	       		Q28YV6              	8.25%
Bootstrap support for F6UMK0 as seed ortholog is 87%.
Bootstrap support for Q28ZD3 as seed ortholog is 74%.
Alternative seed ortholog is Q28Y25 (25 bits away from this cluster)

Group of orthologs #2958. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 D.pseudoobscura:157

F6SWM7              	100.00%		B5DI12              	100.00%
Bootstrap support for F6SWM7 as seed ortholog is 100%.
Bootstrap support for B5DI12 as seed ortholog is 100%.

Group of orthologs #2959. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 D.pseudoobscura:97

F6R255              	100.00%		Q28WM9              	100.00%
Bootstrap support for F6R255 as seed ortholog is 100%.
Bootstrap support for Q28WM9 as seed ortholog is 99%.

Group of orthologs #2960. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 D.pseudoobscura:157

F6VS86              	100.00%		Q294A7              	100.00%
Bootstrap support for F6VS86 as seed ortholog is 100%.
Bootstrap support for Q294A7 as seed ortholog is 100%.

Group of orthologs #2961. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 D.pseudoobscura:157

F6ZII8              	100.00%		Q29JG2              	100.00%
Bootstrap support for F6ZII8 as seed ortholog is 100%.
Bootstrap support for Q29JG2 as seed ortholog is 100%.

Group of orthologs #2962. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 D.pseudoobscura:47

F6Y790              	100.00%		Q29NY6              	100.00%
Bootstrap support for F6Y790 as seed ortholog is 61%.
Alternative seed ortholog is F6YA88 (7 bits away from this cluster)
Bootstrap support for Q29NY6 as seed ortholog is 93%.

Group of orthologs #2963. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 D.pseudoobscura:157

F6YX22              	100.00%		Q2LZY4              	100.00%
Bootstrap support for F6YX22 as seed ortholog is 100%.
Bootstrap support for Q2LZY4 as seed ortholog is 100%.

Group of orthologs #2964. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 D.pseudoobscura:157

H2XPJ6              	100.00%		Q29EZ5              	100.00%
Bootstrap support for H2XPJ6 as seed ortholog is 100%.
Bootstrap support for Q29EZ5 as seed ortholog is 100%.

Group of orthologs #2965. Best score 157 bits
Score difference with first non-orthologous sequence - C.intestinalis:157 D.pseudoobscura:157

H2Y0Y0              	100.00%		Q29LS5              	100.00%
Bootstrap support for H2Y0Y0 as seed ortholog is 100%.
Bootstrap support for Q29LS5 as seed ortholog is 100%.

Group of orthologs #2966. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 D.pseudoobscura:98

F6PP92              	100.00%		B5DYQ6              	100.00%
                    	       		B5DP19              	82.87%
                    	       		B5DKP9              	45.48%
Bootstrap support for F6PP92 as seed ortholog is 100%.
Bootstrap support for B5DYQ6 as seed ortholog is 99%.

Group of orthologs #2967. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 D.pseudoobscura:156

F7B480              	100.00%		B5DV67              	100.00%
                    	       		Q29PC8              	99.44%
Bootstrap support for F7B480 as seed ortholog is 100%.
Bootstrap support for B5DV67 as seed ortholog is 100%.

Group of orthologs #2968. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 D.pseudoobscura:156

F6ZI65              	100.00%		Q29HW1              	100.00%
                    	       		Q29HW2              	13.47%
Bootstrap support for F6ZI65 as seed ortholog is 100%.
Bootstrap support for Q29HW1 as seed ortholog is 100%.

Group of orthologs #2969. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 D.pseudoobscura:156

F6PII0              	100.00%		Q29B10              	100.00%
Bootstrap support for F6PII0 as seed ortholog is 100%.
Bootstrap support for Q29B10 as seed ortholog is 100%.

Group of orthologs #2970. Best score 156 bits
Score difference with first non-orthologous sequence - C.intestinalis:156 D.pseudoobscura:87

F6ZE98              	100.00%		Q29P93              	100.00%
Bootstrap support for F6ZE98 as seed ortholog is 100%.
Bootstrap support for Q29P93 as seed ortholog is 98%.

Group of orthologs #2971. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 D.pseudoobscura:49

F6T336              	100.00%		Q2LYY9              	100.00%
F6T1G9              	100.00%		B5DQ20              	100.00%
F6SEF7              	47.57%		
F6UJQ0              	31.38%		
H2XU43              	8.70%		
F7AZQ1              	7.89%		
F6UYC8              	7.04%		
Bootstrap support for F6T336 as seed ortholog is 98%.
Bootstrap support for F6T1G9 as seed ortholog is 98%.
Bootstrap support for Q2LYY9 as seed ortholog is 86%.
Bootstrap support for B5DQ20 as seed ortholog is 84%.

Group of orthologs #2972. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 D.pseudoobscura:49

H2XNG3              	100.00%		Q296H7              	100.00%
                    	       		Q29J43              	5.44%
Bootstrap support for H2XNG3 as seed ortholog is 100%.
Bootstrap support for Q296H7 as seed ortholog is 91%.

Group of orthologs #2973. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 D.pseudoobscura:155

F6QSD6              	100.00%		Q298L2              	100.00%
Bootstrap support for F6QSD6 as seed ortholog is 100%.
Bootstrap support for Q298L2 as seed ortholog is 100%.

Group of orthologs #2974. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 D.pseudoobscura:155

F6UVN7              	100.00%		Q29PP3              	100.00%
Bootstrap support for F6UVN7 as seed ortholog is 100%.
Bootstrap support for Q29PP3 as seed ortholog is 100%.

Group of orthologs #2975. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 D.pseudoobscura:73

H2XXB3              	100.00%		Q28YE0              	100.00%
Bootstrap support for H2XXB3 as seed ortholog is 99%.
Bootstrap support for Q28YE0 as seed ortholog is 99%.

Group of orthologs #2976. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 D.pseudoobscura:155

H2XLC8              	100.00%		Q2LYW3              	100.00%
Bootstrap support for H2XLC8 as seed ortholog is 100%.
Bootstrap support for Q2LYW3 as seed ortholog is 100%.

Group of orthologs #2977. Best score 155 bits
Score difference with first non-orthologous sequence - C.intestinalis:155 D.pseudoobscura:155

H2Y0B1              	100.00%		Q29L11              	100.00%
Bootstrap support for H2Y0B1 as seed ortholog is 100%.
Bootstrap support for Q29L11 as seed ortholog is 100%.

Group of orthologs #2978. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 D.pseudoobscura:154

F6U8W0              	100.00%		Q29CR8              	100.00%
Bootstrap support for F6U8W0 as seed ortholog is 100%.
Bootstrap support for Q29CR8 as seed ortholog is 100%.

Group of orthologs #2979. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 D.pseudoobscura:154

F7AU71              	100.00%		Q28XY4              	100.00%
Bootstrap support for F7AU71 as seed ortholog is 100%.
Bootstrap support for Q28XY4 as seed ortholog is 100%.

Group of orthologs #2980. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 D.pseudoobscura:154

F6ZJ39              	100.00%		Q297C8              	100.00%
Bootstrap support for F6ZJ39 as seed ortholog is 100%.
Bootstrap support for Q297C8 as seed ortholog is 100%.

Group of orthologs #2981. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 D.pseudoobscura:154

F6U5E5              	100.00%		Q29NZ4              	100.00%
Bootstrap support for F6U5E5 as seed ortholog is 100%.
Bootstrap support for Q29NZ4 as seed ortholog is 100%.

Group of orthologs #2982. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 D.pseudoobscura:154

H2XQH7              	100.00%		Q291D2              	100.00%
Bootstrap support for H2XQH7 as seed ortholog is 99%.
Bootstrap support for Q291D2 as seed ortholog is 100%.

Group of orthologs #2983. Best score 154 bits
Score difference with first non-orthologous sequence - C.intestinalis:154 D.pseudoobscura:154

H2XZ67              	100.00%		Q298I8              	100.00%
Bootstrap support for H2XZ67 as seed ortholog is 100%.
Bootstrap support for Q298I8 as seed ortholog is 100%.

Group of orthologs #2984. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 D.pseudoobscura:43

F6QEV8              	100.00%		Q2LZL3              	100.00%
                    	       		Q2M0Y9              	10.96%
Bootstrap support for F6QEV8 as seed ortholog is 100%.
Bootstrap support for Q2LZL3 as seed ortholog is 87%.

Group of orthologs #2985. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:33 D.pseudoobscura:153

H2XTZ1              	100.00%		Q29MT2              	100.00%
                    	       		Q29MT1              	13.51%
Bootstrap support for H2XTZ1 as seed ortholog is 98%.
Bootstrap support for Q29MT2 as seed ortholog is 100%.

Group of orthologs #2986. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 D.pseudoobscura:153

Q4H3S2              	100.00%		Q29DZ7              	100.00%
                    	       		B5DPM7              	39.93%
Bootstrap support for Q4H3S2 as seed ortholog is 100%.
Bootstrap support for Q29DZ7 as seed ortholog is 100%.

Group of orthologs #2987. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 D.pseudoobscura:153

F6WSD2              	100.00%		Q296P1              	100.00%
Bootstrap support for F6WSD2 as seed ortholog is 100%.
Bootstrap support for Q296P1 as seed ortholog is 100%.

Group of orthologs #2988. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 D.pseudoobscura:153

F6X3B3              	100.00%		Q2M0F9              	100.00%
Bootstrap support for F6X3B3 as seed ortholog is 100%.
Bootstrap support for Q2M0F9 as seed ortholog is 100%.

Group of orthologs #2989. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 D.pseudoobscura:30

F6ZBR4              	100.00%		Q29M88              	100.00%
Bootstrap support for F6ZBR4 as seed ortholog is 100%.
Bootstrap support for Q29M88 as seed ortholog is 76%.

Group of orthologs #2990. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 D.pseudoobscura:153

F7ATY3              	100.00%		Q29KL1              	100.00%
Bootstrap support for F7ATY3 as seed ortholog is 100%.
Bootstrap support for Q29KL1 as seed ortholog is 100%.

Group of orthologs #2991. Best score 153 bits
Score difference with first non-orthologous sequence - C.intestinalis:153 D.pseudoobscura:153

F7AIM1              	100.00%		Q29PP5              	100.00%
Bootstrap support for F7AIM1 as seed ortholog is 100%.
Bootstrap support for Q29PP5 as seed ortholog is 100%.

Group of orthologs #2992. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 D.pseudoobscura:152

F7A9I0              	100.00%		B5DNK3              	100.00%
H2XY79              	7.30%		
H2XP28              	6.97%		
Bootstrap support for F7A9I0 as seed ortholog is 89%.
Bootstrap support for B5DNK3 as seed ortholog is 100%.

Group of orthologs #2993. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 D.pseudoobscura:85

F6YF45              	100.00%		B5DKQ4              	100.00%
Bootstrap support for F6YF45 as seed ortholog is 100%.
Bootstrap support for B5DKQ4 as seed ortholog is 100%.

Group of orthologs #2994. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 D.pseudoobscura:152

F6VSM2              	100.00%		Q28ZS1              	100.00%
Bootstrap support for F6VSM2 as seed ortholog is 100%.
Bootstrap support for Q28ZS1 as seed ortholog is 100%.

Group of orthologs #2995. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 D.pseudoobscura:152

F6V1U5              	100.00%		Q29CP5              	100.00%
Bootstrap support for F6V1U5 as seed ortholog is 100%.
Bootstrap support for Q29CP5 as seed ortholog is 100%.

Group of orthologs #2996. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 D.pseudoobscura:152

F6YZ79              	100.00%		Q291E5              	100.00%
Bootstrap support for F6YZ79 as seed ortholog is 100%.
Bootstrap support for Q291E5 as seed ortholog is 100%.

Group of orthologs #2997. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 D.pseudoobscura:53

H2XQ56              	100.00%		Q291G9              	100.00%
Bootstrap support for H2XQ56 as seed ortholog is 100%.
Bootstrap support for Q291G9 as seed ortholog is 99%.

Group of orthologs #2998. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 D.pseudoobscura:91

F6ZBE4              	100.00%		Q29HX2              	100.00%
Bootstrap support for F6ZBE4 as seed ortholog is 99%.
Bootstrap support for Q29HX2 as seed ortholog is 99%.

Group of orthologs #2999. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 D.pseudoobscura:152

H2XWJ0              	100.00%		Q28Y35              	100.00%
Bootstrap support for H2XWJ0 as seed ortholog is 100%.
Bootstrap support for Q28Y35 as seed ortholog is 100%.

Group of orthologs #3000. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 D.pseudoobscura:152

F7BMP3              	100.00%		Q29FP7              	100.00%
Bootstrap support for F7BMP3 as seed ortholog is 100%.
Bootstrap support for Q29FP7 as seed ortholog is 100%.

Group of orthologs #3001. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 D.pseudoobscura:152

H2XS17              	100.00%		Q297S9              	100.00%
Bootstrap support for H2XS17 as seed ortholog is 100%.
Bootstrap support for Q297S9 as seed ortholog is 100%.

Group of orthologs #3002. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 D.pseudoobscura:152

F6ZFZ3              	100.00%		Q29N49              	100.00%
Bootstrap support for F6ZFZ3 as seed ortholog is 100%.
Bootstrap support for Q29N49 as seed ortholog is 100%.

Group of orthologs #3003. Best score 152 bits
Score difference with first non-orthologous sequence - C.intestinalis:152 D.pseudoobscura:152

H2XSM3              	100.00%		Q29I15              	100.00%
Bootstrap support for H2XSM3 as seed ortholog is 100%.
Bootstrap support for Q29I15 as seed ortholog is 100%.

Group of orthologs #3004. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 D.pseudoobscura:6

F6RAU0              	100.00%		B5DZF5              	100.00%
F6YLU7              	7.67%		
K9J6P3              	7.42%		
F7AS68              	7.16%		
Bootstrap support for F6RAU0 as seed ortholog is 66%.
Alternative seed ortholog is F7AJY7 (14 bits away from this cluster)
Bootstrap support for B5DZF5 as seed ortholog is 80%.

Group of orthologs #3005. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:151

F6ZZX7              	100.00%		B5DVM2              	100.00%
                    	       		Q298H2              	100.00%
Bootstrap support for F6ZZX7 as seed ortholog is 100%.
Bootstrap support for B5DVM2 as seed ortholog is 100%.
Bootstrap support for Q298H2 as seed ortholog is 100%.

Group of orthologs #3006. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:151

H2XLX1              	100.00%		B5DRB9              	100.00%
                    	       		B5DYV2              	86.74%
Bootstrap support for H2XLX1 as seed ortholog is 100%.
Bootstrap support for B5DRB9 as seed ortholog is 100%.

Group of orthologs #3007. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:151

H2XX23              	100.00%		B5DPG6              	100.00%
H2Y142              	100.00%		
Bootstrap support for H2XX23 as seed ortholog is 100%.
Bootstrap support for H2Y142 as seed ortholog is 100%.
Bootstrap support for B5DPG6 as seed ortholog is 100%.

Group of orthologs #3008. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 D.pseudoobscura:151

H2Y1N7              	100.00%		Q29ET2              	100.00%
                    	       		Q290U8              	5.86%
Bootstrap support for H2Y1N7 as seed ortholog is 96%.
Bootstrap support for Q29ET2 as seed ortholog is 100%.

Group of orthologs #3009. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:151

F6U9P7              	100.00%		B5DS82              	100.00%
Bootstrap support for F6U9P7 as seed ortholog is 100%.
Bootstrap support for B5DS82 as seed ortholog is 100%.

Group of orthologs #3010. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:151

F6Q521              	100.00%		Q28XH9              	100.00%
Bootstrap support for F6Q521 as seed ortholog is 100%.
Bootstrap support for Q28XH9 as seed ortholog is 100%.

Group of orthologs #3011. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:151

F6RKI1              	100.00%		Q29F90              	100.00%
Bootstrap support for F6RKI1 as seed ortholog is 100%.
Bootstrap support for Q29F90 as seed ortholog is 100%.

Group of orthologs #3012. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:151

H2XTQ3              	100.00%		B5DIX0              	100.00%
Bootstrap support for H2XTQ3 as seed ortholog is 100%.
Bootstrap support for B5DIX0 as seed ortholog is 100%.

Group of orthologs #3013. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:151

F6Y4L7              	100.00%		Q29BL2              	100.00%
Bootstrap support for F6Y4L7 as seed ortholog is 100%.
Bootstrap support for Q29BL2 as seed ortholog is 100%.

Group of orthologs #3014. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:151

H2XNC6              	100.00%		Q29AN6              	100.00%
Bootstrap support for H2XNC6 as seed ortholog is 100%.
Bootstrap support for Q29AN6 as seed ortholog is 100%.

Group of orthologs #3015. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:151

H2XMB9              	100.00%		Q29CE8              	100.00%
Bootstrap support for H2XMB9 as seed ortholog is 100%.
Bootstrap support for Q29CE8 as seed ortholog is 100%.

Group of orthologs #3016. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:151

F6ZA91              	100.00%		Q29NF2              	100.00%
Bootstrap support for F6ZA91 as seed ortholog is 100%.
Bootstrap support for Q29NF2 as seed ortholog is 100%.

Group of orthologs #3017. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:151

H2XQZ0              	100.00%		Q29AK0              	100.00%
Bootstrap support for H2XQZ0 as seed ortholog is 100%.
Bootstrap support for Q29AK0 as seed ortholog is 100%.

Group of orthologs #3018. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:151 D.pseudoobscura:151

F7BD35              	100.00%		Q29P08              	100.00%
Bootstrap support for F7BD35 as seed ortholog is 100%.
Bootstrap support for Q29P08 as seed ortholog is 100%.

Group of orthologs #3019. Best score 151 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 D.pseudoobscura:18

H2XNS7              	100.00%		Q29LS6              	100.00%
Bootstrap support for H2XNS7 as seed ortholog is 90%.
Bootstrap support for Q29LS6 as seed ortholog is 93%.

Group of orthologs #3020. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 D.pseudoobscura:150

F6XEX3              	100.00%		Q292E2              	100.00%
F6XEW4              	37.35%		Q296H4              	21.32%
                    	       		Q29AS8              	19.45%
                    	       		Q29BR1              	16.37%
                    	       		Q29AS7              	15.27%
Bootstrap support for F6XEX3 as seed ortholog is 100%.
Bootstrap support for Q292E2 as seed ortholog is 100%.

Group of orthologs #3021. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 D.pseudoobscura:35

F6SGF2              	100.00%		Q29B96              	100.00%
                    	       		Q29PA1              	9.18%
                    	       		Q2M1B0              	7.40%
                    	       		B5DHL7              	5.96%
                    	       		B5E152              	5.87%
Bootstrap support for F6SGF2 as seed ortholog is 70%.
Alternative seed ortholog is H2XZF2 (39 bits away from this cluster)
Bootstrap support for Q29B96 as seed ortholog is 75%.

Group of orthologs #3022. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 D.pseudoobscura:150

F6TAY9              	100.00%		B5DWT8              	100.00%
                    	       		B5DWT9              	17.27%
Bootstrap support for F6TAY9 as seed ortholog is 100%.
Bootstrap support for B5DWT8 as seed ortholog is 100%.

Group of orthologs #3023. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 D.pseudoobscura:150

F6VBS7              	100.00%		Q293A5              	100.00%
                    	       		Q29BB2              	29.07%
Bootstrap support for F6VBS7 as seed ortholog is 99%.
Bootstrap support for Q293A5 as seed ortholog is 100%.

Group of orthologs #3024. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 D.pseudoobscura:150

F6YKG0              	100.00%		Q29EY7              	100.00%
                    	       		Q28XR4              	11.61%
Bootstrap support for F6YKG0 as seed ortholog is 100%.
Bootstrap support for Q29EY7 as seed ortholog is 100%.

Group of orthologs #3025. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 D.pseudoobscura:150

F6SIN5              	100.00%		B5DTL9              	100.00%
Bootstrap support for F6SIN5 as seed ortholog is 100%.
Bootstrap support for B5DTL9 as seed ortholog is 100%.

Group of orthologs #3026. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 D.pseudoobscura:150

F6PK60              	100.00%		Q28YJ5              	100.00%
Bootstrap support for F6PK60 as seed ortholog is 100%.
Bootstrap support for Q28YJ5 as seed ortholog is 100%.

Group of orthologs #3027. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 D.pseudoobscura:150

F6TZC4              	100.00%		Q2M0E1              	100.00%
Bootstrap support for F6TZC4 as seed ortholog is 100%.
Bootstrap support for Q2M0E1 as seed ortholog is 100%.

Group of orthologs #3028. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 D.pseudoobscura:150

F7AGV8              	100.00%		Q29KT1              	100.00%
Bootstrap support for F7AGV8 as seed ortholog is 100%.
Bootstrap support for Q29KT1 as seed ortholog is 100%.

Group of orthologs #3029. Best score 150 bits
Score difference with first non-orthologous sequence - C.intestinalis:150 D.pseudoobscura:150

H2XR06              	100.00%		Q29DB9              	100.00%
Bootstrap support for H2XR06 as seed ortholog is 100%.
Bootstrap support for Q29DB9 as seed ortholog is 100%.

Group of orthologs #3030. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 D.pseudoobscura:149

F6ZRN6              	100.00%		B5DQ48              	100.00%
                    	       		B5DH57              	48.95%
Bootstrap support for F6ZRN6 as seed ortholog is 100%.
Bootstrap support for B5DQ48 as seed ortholog is 100%.

Group of orthologs #3031. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 D.pseudoobscura:61

F7BBI5              	100.00%		Q29A67              	100.00%
                    	       		Q297B8              	25.13%
Bootstrap support for F7BBI5 as seed ortholog is 73%.
Alternative seed ortholog is H2Y2Z2 (19 bits away from this cluster)
Bootstrap support for Q29A67 as seed ortholog is 96%.

Group of orthologs #3032. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 D.pseudoobscura:149

F6XC87              	100.00%		Q29LT6              	100.00%
                    	       		Q29LT7              	41.90%
Bootstrap support for F6XC87 as seed ortholog is 100%.
Bootstrap support for Q29LT6 as seed ortholog is 100%.

Group of orthologs #3033. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 D.pseudoobscura:149

F6TQZ3              	100.00%		B5E0K3              	100.00%
Bootstrap support for F6TQZ3 as seed ortholog is 100%.
Bootstrap support for B5E0K3 as seed ortholog is 100%.

Group of orthologs #3034. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 D.pseudoobscura:149

F6PWX0              	100.00%		Q29E01              	100.00%
Bootstrap support for F6PWX0 as seed ortholog is 100%.
Bootstrap support for Q29E01 as seed ortholog is 100%.

Group of orthologs #3035. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 D.pseudoobscura:149

F6UNT7              	100.00%		Q2LZE9              	100.00%
Bootstrap support for F6UNT7 as seed ortholog is 100%.
Bootstrap support for Q2LZE9 as seed ortholog is 100%.

Group of orthologs #3036. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 D.pseudoobscura:149

H2XVJ2              	100.00%		Q296B8              	100.00%
Bootstrap support for H2XVJ2 as seed ortholog is 100%.
Bootstrap support for Q296B8 as seed ortholog is 100%.

Group of orthologs #3037. Best score 149 bits
Score difference with first non-orthologous sequence - C.intestinalis:149 D.pseudoobscura:149

H2XY72              	100.00%		Q29I92              	100.00%
Bootstrap support for H2XY72 as seed ortholog is 100%.
Bootstrap support for Q29I92 as seed ortholog is 100%.

Group of orthologs #3038. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:148

F7BKG7              	100.00%		B5E0N6              	100.00%
                    	       		B5DV19              	66.14%
                    	       		B5DV18              	65.83%
                    	       		B5DV17              	64.58%
Bootstrap support for F7BKG7 as seed ortholog is 100%.
Bootstrap support for B5E0N6 as seed ortholog is 100%.

Group of orthologs #3039. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:83

F6Z3A0              	100.00%		Q28Y07              	100.00%
                    	       		B5E0D0              	70.06%
                    	       		B5DND4              	25.48%
Bootstrap support for F6Z3A0 as seed ortholog is 99%.
Bootstrap support for Q28Y07 as seed ortholog is 99%.

Group of orthologs #3040. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:148

F6ZFV5              	100.00%		Q28X66              	100.00%
                    	       		B5DH92              	21.97%
Bootstrap support for F6ZFV5 as seed ortholog is 100%.
Bootstrap support for Q28X66 as seed ortholog is 100%.

Group of orthologs #3041. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:148

F7AD34              	100.00%		Q29HM1              	100.00%
                    	       		B5DWD4              	60.39%
Bootstrap support for F7AD34 as seed ortholog is 100%.
Bootstrap support for Q29HM1 as seed ortholog is 100%.

Group of orthologs #3042. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:148

F6Q6C3              	100.00%		B5DJR6              	100.00%
Bootstrap support for F6Q6C3 as seed ortholog is 100%.
Bootstrap support for B5DJR6 as seed ortholog is 100%.

Group of orthologs #3043. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 D.pseudoobscura:148

F6UA38              	100.00%		B5DXG7              	100.00%
Bootstrap support for F6UA38 as seed ortholog is 99%.
Bootstrap support for B5DXG7 as seed ortholog is 100%.

Group of orthologs #3044. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:148

F6RQ34              	100.00%		Q290P9              	100.00%
Bootstrap support for F6RQ34 as seed ortholog is 100%.
Bootstrap support for Q290P9 as seed ortholog is 100%.

Group of orthologs #3045. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:148

F7BBF0              	100.00%		B5DK84              	100.00%
Bootstrap support for F7BBF0 as seed ortholog is 100%.
Bootstrap support for B5DK84 as seed ortholog is 100%.

Group of orthologs #3046. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:6

F7AUI4              	100.00%		B5DM66              	100.00%
Bootstrap support for F7AUI4 as seed ortholog is 100%.
Bootstrap support for B5DM66 as seed ortholog is 48%.
Alternative seed ortholog is Q29K11 (6 bits away from this cluster)

Group of orthologs #3047. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:148

F6QIV0              	100.00%		Q29A39              	100.00%
Bootstrap support for F6QIV0 as seed ortholog is 100%.
Bootstrap support for Q29A39 as seed ortholog is 100%.

Group of orthologs #3048. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 D.pseudoobscura:148

F6YCI4              	100.00%		Q290T8              	100.00%
Bootstrap support for F6YCI4 as seed ortholog is 99%.
Bootstrap support for Q290T8 as seed ortholog is 100%.

Group of orthologs #3049. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:148

F6UFD0              	100.00%		Q29H69              	100.00%
Bootstrap support for F6UFD0 as seed ortholog is 100%.
Bootstrap support for Q29H69 as seed ortholog is 100%.

Group of orthologs #3050. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:148

H2XTF1              	100.00%		B5DZ21              	100.00%
Bootstrap support for H2XTF1 as seed ortholog is 100%.
Bootstrap support for B5DZ21 as seed ortholog is 100%.

Group of orthologs #3051. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:148

F7BEK1              	100.00%		Q296Z6              	100.00%
Bootstrap support for F7BEK1 as seed ortholog is 100%.
Bootstrap support for Q296Z6 as seed ortholog is 100%.

Group of orthologs #3052. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:148

F7AW28              	100.00%		Q29DY9              	100.00%
Bootstrap support for F7AW28 as seed ortholog is 100%.
Bootstrap support for Q29DY9 as seed ortholog is 100%.

Group of orthologs #3053. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:148

H2XQJ8              	100.00%		Q29H00              	100.00%
Bootstrap support for H2XQJ8 as seed ortholog is 100%.
Bootstrap support for Q29H00 as seed ortholog is 100%.

Group of orthologs #3054. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:148

H2XYV9              	100.00%		Q29E79              	100.00%
Bootstrap support for H2XYV9 as seed ortholog is 100%.
Bootstrap support for Q29E79 as seed ortholog is 100%.

Group of orthologs #3055. Best score 148 bits
Score difference with first non-orthologous sequence - C.intestinalis:148 D.pseudoobscura:148

H2Y2S5              	100.00%		Q29M53              	100.00%
Bootstrap support for H2Y2S5 as seed ortholog is 100%.
Bootstrap support for Q29M53 as seed ortholog is 100%.

Group of orthologs #3056. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 D.pseudoobscura:147

F6TQ55              	100.00%		B5DLB3              	100.00%
Bootstrap support for F6TQ55 as seed ortholog is 100%.
Bootstrap support for B5DLB3 as seed ortholog is 100%.

Group of orthologs #3057. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 D.pseudoobscura:28

B5UA19              	100.00%		B5DX60              	100.00%
Bootstrap support for B5UA19 as seed ortholog is 84%.
Bootstrap support for B5DX60 as seed ortholog is 75%.

Group of orthologs #3058. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 D.pseudoobscura:147

F6ZJB9              	100.00%		B5DW49              	100.00%
Bootstrap support for F6ZJB9 as seed ortholog is 100%.
Bootstrap support for B5DW49 as seed ortholog is 100%.

Group of orthologs #3059. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 D.pseudoobscura:147

F6VAW2              	100.00%		Q298R1              	100.00%
Bootstrap support for F6VAW2 as seed ortholog is 100%.
Bootstrap support for Q298R1 as seed ortholog is 100%.

Group of orthologs #3060. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 D.pseudoobscura:147

F6UU76              	100.00%		Q29MY6              	100.00%
Bootstrap support for F6UU76 as seed ortholog is 100%.
Bootstrap support for Q29MY6 as seed ortholog is 100%.

Group of orthologs #3061. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 D.pseudoobscura:34

H2XVX8              	100.00%		Q28ZK9              	100.00%
Bootstrap support for H2XVX8 as seed ortholog is 98%.
Bootstrap support for Q28ZK9 as seed ortholog is 94%.

Group of orthologs #3062. Best score 147 bits
Score difference with first non-orthologous sequence - C.intestinalis:147 D.pseudoobscura:147

H2XQ72              	100.00%		Q29J00              	100.00%
Bootstrap support for H2XQ72 as seed ortholog is 100%.
Bootstrap support for Q29J00 as seed ortholog is 100%.

Group of orthologs #3063. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 D.pseudoobscura:146

F6QLU5              	100.00%		B5DMN1              	100.00%
Bootstrap support for F6QLU5 as seed ortholog is 100%.
Bootstrap support for B5DMN1 as seed ortholog is 100%.

Group of orthologs #3064. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 D.pseudoobscura:146

F6W0T2              	100.00%		B5DI31              	100.00%
Bootstrap support for F6W0T2 as seed ortholog is 100%.
Bootstrap support for B5DI31 as seed ortholog is 100%.

Group of orthologs #3065. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 D.pseudoobscura:146

F6QAF5              	100.00%		Q290T3              	100.00%
Bootstrap support for F6QAF5 as seed ortholog is 100%.
Bootstrap support for Q290T3 as seed ortholog is 100%.

Group of orthologs #3066. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 D.pseudoobscura:146

F6QH68              	100.00%		Q29I20              	100.00%
Bootstrap support for F6QH68 as seed ortholog is 100%.
Bootstrap support for Q29I20 as seed ortholog is 100%.

Group of orthologs #3067. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 D.pseudoobscura:77

F6QRU4              	100.00%		Q29HI7              	100.00%
Bootstrap support for F6QRU4 as seed ortholog is 68%.
Alternative seed ortholog is F6WU12 (15 bits away from this cluster)
Bootstrap support for Q29HI7 as seed ortholog is 99%.

Group of orthologs #3068. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 D.pseudoobscura:146

F7BEP5              	100.00%		B5DVJ4              	100.00%
Bootstrap support for F7BEP5 as seed ortholog is 100%.
Bootstrap support for B5DVJ4 as seed ortholog is 100%.

Group of orthologs #3069. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 D.pseudoobscura:27

F7A934              	100.00%		Q293P9              	100.00%
Bootstrap support for F7A934 as seed ortholog is 97%.
Bootstrap support for Q293P9 as seed ortholog is 73%.
Alternative seed ortholog is Q29L06 (27 bits away from this cluster)

Group of orthologs #3070. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 D.pseudoobscura:146

F6Z8R5              	100.00%		Q29AF1              	100.00%
Bootstrap support for F6Z8R5 as seed ortholog is 100%.
Bootstrap support for Q29AF1 as seed ortholog is 100%.

Group of orthologs #3071. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 D.pseudoobscura:146

F6XGB5              	100.00%		Q2LZB4              	100.00%
Bootstrap support for F6XGB5 as seed ortholog is 100%.
Bootstrap support for Q2LZB4 as seed ortholog is 100%.

Group of orthologs #3072. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 D.pseudoobscura:146

H2Y0D5              	100.00%		P54363              	100.00%
Bootstrap support for H2Y0D5 as seed ortholog is 100%.
Bootstrap support for P54363 as seed ortholog is 100%.

Group of orthologs #3073. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 D.pseudoobscura:146

H2XQB5              	100.00%		Q29AL3              	100.00%
Bootstrap support for H2XQB5 as seed ortholog is 100%.
Bootstrap support for Q29AL3 as seed ortholog is 100%.

Group of orthologs #3074. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 D.pseudoobscura:146

H2XR90              	100.00%		Q29KY0              	100.00%
Bootstrap support for H2XR90 as seed ortholog is 100%.
Bootstrap support for Q29KY0 as seed ortholog is 100%.

Group of orthologs #3075. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:146 D.pseudoobscura:146

H2XWG7              	100.00%		Q29GS0              	100.00%
Bootstrap support for H2XWG7 as seed ortholog is 100%.
Bootstrap support for Q29GS0 as seed ortholog is 100%.

Group of orthologs #3076. Best score 146 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 D.pseudoobscura:146

H2XXE6              	100.00%		Q29I18              	100.00%
Bootstrap support for H2XXE6 as seed ortholog is 99%.
Bootstrap support for Q29I18 as seed ortholog is 100%.

Group of orthologs #3077. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 D.pseudoobscura:95

F7AUP3              	100.00%		Q2LZF3              	100.00%
F7AY96              	88.07%		Q2LZF5              	29.61%
F7AV59              	62.22%		B5DPX2              	27.65%
L7N0S5              	57.39%		B5DPX1              	25.42%
F6ZYU1              	38.35%		Q2LZF4              	21.51%
Bootstrap support for F7AUP3 as seed ortholog is 99%.
Bootstrap support for Q2LZF3 as seed ortholog is 99%.

Group of orthologs #3078. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 D.pseudoobscura:145

F6V8N0              	100.00%		B5DL65              	100.00%
H2Y092              	8.67%		Q29CR4              	40.97%
                    	       		Q293B7              	38.97%
Bootstrap support for F6V8N0 as seed ortholog is 100%.
Bootstrap support for B5DL65 as seed ortholog is 100%.

Group of orthologs #3079. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 D.pseudoobscura:145

F6WKD5              	100.00%		B5DZW9              	100.00%
                    	       		Q290S3              	8.74%
Bootstrap support for F6WKD5 as seed ortholog is 100%.
Bootstrap support for B5DZW9 as seed ortholog is 100%.

Group of orthologs #3080. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 D.pseudoobscura:145

H2XLB1              	100.00%		Q296C6              	100.00%
H2XNW6              	25.90%		
Bootstrap support for H2XLB1 as seed ortholog is 100%.
Bootstrap support for Q296C6 as seed ortholog is 100%.

Group of orthologs #3081. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 D.pseudoobscura:95

F6YV26              	100.00%		Q2M1A5              	100.00%
                    	       		B5DII4              	48.58%
Bootstrap support for F6YV26 as seed ortholog is 100%.
Bootstrap support for Q2M1A5 as seed ortholog is 99%.

Group of orthologs #3082. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 D.pseudoobscura:145

F6RD45              	100.00%		Q28ZV4              	100.00%
Bootstrap support for F6RD45 as seed ortholog is 100%.
Bootstrap support for Q28ZV4 as seed ortholog is 100%.

Group of orthologs #3083. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 D.pseudoobscura:145

F7A5U1              	100.00%		Q299V7              	100.00%
Bootstrap support for F7A5U1 as seed ortholog is 100%.
Bootstrap support for Q299V7 as seed ortholog is 100%.

Group of orthologs #3084. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 D.pseudoobscura:145

F6XMX2              	100.00%		Q29KY4              	100.00%
Bootstrap support for F6XMX2 as seed ortholog is 100%.
Bootstrap support for Q29KY4 as seed ortholog is 100%.

Group of orthologs #3085. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 D.pseudoobscura:145

H2XQD7              	100.00%		Q294V7              	100.00%
Bootstrap support for H2XQD7 as seed ortholog is 100%.
Bootstrap support for Q294V7 as seed ortholog is 100%.

Group of orthologs #3086. Best score 145 bits
Score difference with first non-orthologous sequence - C.intestinalis:145 D.pseudoobscura:145

H2XTR2              	100.00%		Q291W6              	100.00%
Bootstrap support for H2XTR2 as seed ortholog is 100%.
Bootstrap support for Q291W6 as seed ortholog is 100%.

Group of orthologs #3087. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:144

H2XWE8              	100.00%		Q28ZG6              	100.00%
                    	       		Q29F26              	100.00%
                    	       		B5E1E9              	24.69%
                    	       		Q29F28              	12.66%
                    	       		Q29F29              	9.32%
                    	       		Q29F25              	6.03%
Bootstrap support for H2XWE8 as seed ortholog is 100%.
Bootstrap support for Q28ZG6 as seed ortholog is 100%.
Bootstrap support for Q29F26 as seed ortholog is 100%.

Group of orthologs #3088. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 D.pseudoobscura:3

F7B7S8              	100.00%		Q29AD2              	100.00%
                    	       		B5DYL3              	10.96%
                    	       		Q298T1              	8.76%
                    	       		B5DYL4              	6.77%
Bootstrap support for F7B7S8 as seed ortholog is 60%.
Alternative seed ortholog is F7AZY1 (10 bits away from this cluster)
Bootstrap support for Q29AD2 as seed ortholog is 52%.
Alternative seed ortholog is Q29K70 (3 bits away from this cluster)

Group of orthologs #3089. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:11 D.pseudoobscura:47

F6XU21              	100.00%		B5DPJ7              	100.00%
H2Y012              	100.00%		Q2M032              	100.00%
Bootstrap support for F6XU21 as seed ortholog is 61%.
Alternative seed ortholog is H2Y145 (11 bits away from this cluster)
Bootstrap support for H2Y012 as seed ortholog is 63%.
Alternative seed ortholog is H2Y145 (11 bits away from this cluster)
Bootstrap support for B5DPJ7 as seed ortholog is 87%.
Bootstrap support for Q2M032 as seed ortholog is 56%.
Alternative seed ortholog is Q28ZP9 (47 bits away from this cluster)

Group of orthologs #3090. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:144

H2XZZ2              	100.00%		Q28X95              	100.00%
H2XS31              	97.62%		
Bootstrap support for H2XZZ2 as seed ortholog is 100%.
Bootstrap support for Q28X95 as seed ortholog is 100%.

Group of orthologs #3091. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:144

F6RJ65              	100.00%		B5DMV0              	100.00%
Bootstrap support for F6RJ65 as seed ortholog is 100%.
Bootstrap support for B5DMV0 as seed ortholog is 100%.

Group of orthologs #3092. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:144

F6QW82              	100.00%		Q291M0              	100.00%
Bootstrap support for F6QW82 as seed ortholog is 100%.
Bootstrap support for Q291M0 as seed ortholog is 100%.

Group of orthologs #3093. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:144

F6V1C0              	100.00%		I5APU9              	100.00%
Bootstrap support for F6V1C0 as seed ortholog is 100%.
Bootstrap support for I5APU9 as seed ortholog is 100%.

Group of orthologs #3094. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:144

F6WDK3              	100.00%		B5DZZ6              	100.00%
Bootstrap support for F6WDK3 as seed ortholog is 100%.
Bootstrap support for B5DZZ6 as seed ortholog is 100%.

Group of orthologs #3095. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:144

F6T4T6              	100.00%		Q299Z7              	100.00%
Bootstrap support for F6T4T6 as seed ortholog is 100%.
Bootstrap support for Q299Z7 as seed ortholog is 100%.

Group of orthologs #3096. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:144

F7BNX7              	100.00%		Q299B4              	100.00%
Bootstrap support for F7BNX7 as seed ortholog is 100%.
Bootstrap support for Q299B4 as seed ortholog is 100%.

Group of orthologs #3097. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:144

F6VE17              	100.00%		Q2LZN4              	100.00%
Bootstrap support for F6VE17 as seed ortholog is 100%.
Bootstrap support for Q2LZN4 as seed ortholog is 100%.

Group of orthologs #3098. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:144

H2XJU2              	100.00%		Q29HG3              	100.00%
Bootstrap support for H2XJU2 as seed ortholog is 100%.
Bootstrap support for Q29HG3 as seed ortholog is 100%.

Group of orthologs #3099. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:144 D.pseudoobscura:144

H2XLN9              	100.00%		Q29FT8              	100.00%
Bootstrap support for H2XLN9 as seed ortholog is 100%.
Bootstrap support for Q29FT8 as seed ortholog is 100%.

Group of orthologs #3100. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 D.pseudoobscura:144

H2XRX1              	100.00%		Q29ER6              	100.00%
Bootstrap support for H2XRX1 as seed ortholog is 99%.
Bootstrap support for Q29ER6 as seed ortholog is 100%.

Group of orthologs #3101. Best score 144 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 D.pseudoobscura:97

F7B012              	100.00%		Q2LZL7              	100.00%
Bootstrap support for F7B012 as seed ortholog is 99%.
Bootstrap support for Q2LZL7 as seed ortholog is 100%.

Group of orthologs #3102. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 D.pseudoobscura:14

H2XND2              	100.00%		Q28ZY5              	100.00%
H2XYC6              	17.83%		
H2XU71              	6.97%		
Bootstrap support for H2XND2 as seed ortholog is 100%.
Bootstrap support for Q28ZY5 as seed ortholog is 54%.
Alternative seed ortholog is Q29PK0 (14 bits away from this cluster)

Group of orthologs #3103. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 D.pseudoobscura:143

F7A2R6              	100.00%		Q29KZ4              	100.00%
                    	       		Q29E09              	24.57%
Bootstrap support for F7A2R6 as seed ortholog is 100%.
Bootstrap support for Q29KZ4 as seed ortholog is 100%.

Group of orthologs #3104. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 D.pseudoobscura:65

F6WJ76              	100.00%		Q290X1              	100.00%
Bootstrap support for F6WJ76 as seed ortholog is 89%.
Bootstrap support for Q290X1 as seed ortholog is 99%.

Group of orthologs #3105. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 D.pseudoobscura:143

F6VFA0              	100.00%		Q29I12              	100.00%
Bootstrap support for F6VFA0 as seed ortholog is 100%.
Bootstrap support for Q29I12 as seed ortholog is 100%.

Group of orthologs #3106. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 D.pseudoobscura:2

F6SYR3              	100.00%		Q2M0R9              	100.00%
Bootstrap support for F6SYR3 as seed ortholog is 70%.
Alternative seed ortholog is F7AZY1 (17 bits away from this cluster)
Bootstrap support for Q2M0R9 as seed ortholog is 52%.
Alternative seed ortholog is Q29K70 (2 bits away from this cluster)

Group of orthologs #3107. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 D.pseudoobscura:143

F7ALA2              	100.00%		Q299L4              	100.00%
Bootstrap support for F7ALA2 as seed ortholog is 100%.
Bootstrap support for Q299L4 as seed ortholog is 100%.

Group of orthologs #3108. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 D.pseudoobscura:143

H2XPG9              	100.00%		Q292N5              	100.00%
Bootstrap support for H2XPG9 as seed ortholog is 100%.
Bootstrap support for Q292N5 as seed ortholog is 100%.

Group of orthologs #3109. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 D.pseudoobscura:143

Q1RLC9              	100.00%		Q298E0              	100.00%
Bootstrap support for Q1RLC9 as seed ortholog is 100%.
Bootstrap support for Q298E0 as seed ortholog is 100%.

Group of orthologs #3110. Best score 143 bits
Score difference with first non-orthologous sequence - C.intestinalis:143 D.pseudoobscura:82

H2XY81              	100.00%		Q29MU0              	100.00%
Bootstrap support for H2XY81 as seed ortholog is 100%.
Bootstrap support for Q29MU0 as seed ortholog is 100%.

Group of orthologs #3111. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 D.pseudoobscura:142

F6XLN4              	100.00%		B5DZD9              	100.00%
                    	       		B5DT90              	54.93%
Bootstrap support for F6XLN4 as seed ortholog is 100%.
Bootstrap support for B5DZD9 as seed ortholog is 100%.

Group of orthologs #3112. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:142 D.pseudoobscura:88

F6VPT6              	100.00%		B5DM20              	100.00%
Bootstrap support for F6VPT6 as seed ortholog is 100%.
Bootstrap support for B5DM20 as seed ortholog is 98%.

Group of orthologs #3113. Best score 142 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 D.pseudoobscura:93

F6VR17              	100.00%		Q29D12              	100.00%
Bootstrap support for F6VR17 as seed ortholog is 99%.
Bootstrap support for Q29D12 as seed ortholog is 99%.

Group of orthologs #3114. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:141

H2Y3H8              	100.00%		Q28Z15              	100.00%
                    	       		B5DTC0              	51.31%
                    	       		B5DTB8              	36.90%
Bootstrap support for H2Y3H8 as seed ortholog is 100%.
Bootstrap support for Q28Z15 as seed ortholog is 100%.

Group of orthologs #3115. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 D.pseudoobscura:63

F6U7B2              	100.00%		Q293Q2              	100.00%
                    	       		Q2M0N9              	5.71%
Bootstrap support for F6U7B2 as seed ortholog is 89%.
Bootstrap support for Q293Q2 as seed ortholog is 93%.

Group of orthologs #3116. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 D.pseudoobscura:64

F6ZXM0              	100.00%		Q28ZL8              	100.00%
                    	       		Q292N6              	18.22%
Bootstrap support for F6ZXM0 as seed ortholog is 99%.
Bootstrap support for Q28ZL8 as seed ortholog is 97%.

Group of orthologs #3117. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:141

F6WF92              	100.00%		Q29GH6              	100.00%
                    	       		Q29I08              	19.05%
Bootstrap support for F6WF92 as seed ortholog is 100%.
Bootstrap support for Q29GH6 as seed ortholog is 100%.

Group of orthologs #3118. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:141

F6PZM1              	100.00%		Q294B7              	100.00%
Bootstrap support for F6PZM1 as seed ortholog is 100%.
Bootstrap support for Q294B7 as seed ortholog is 100%.

Group of orthologs #3119. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:141

H2XQU3              	100.00%		B5DIP7              	100.00%
Bootstrap support for H2XQU3 as seed ortholog is 100%.
Bootstrap support for B5DIP7 as seed ortholog is 100%.

Group of orthologs #3120. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:141

F6ZHD7              	100.00%		B5E171              	100.00%
Bootstrap support for F6ZHD7 as seed ortholog is 100%.
Bootstrap support for B5E171 as seed ortholog is 100%.

Group of orthologs #3121. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 D.pseudoobscura:42

F6WJ31              	100.00%		Q295U2              	100.00%
Bootstrap support for F6WJ31 as seed ortholog is 74%.
Alternative seed ortholog is Q1RQ09 (14 bits away from this cluster)
Bootstrap support for Q295U2 as seed ortholog is 49%.
Alternative seed ortholog is Q292R5 (42 bits away from this cluster)

Group of orthologs #3122. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:141

F6U9L3              	100.00%		Q29EN9              	100.00%
Bootstrap support for F6U9L3 as seed ortholog is 100%.
Bootstrap support for Q29EN9 as seed ortholog is 100%.

Group of orthologs #3123. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:141

F6ZQH5              	100.00%		Q294D9              	100.00%
Bootstrap support for F6ZQH5 as seed ortholog is 100%.
Bootstrap support for Q294D9 as seed ortholog is 100%.

Group of orthologs #3124. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:141

F7AW07              	100.00%		Q295K3              	100.00%
Bootstrap support for F7AW07 as seed ortholog is 100%.
Bootstrap support for Q295K3 as seed ortholog is 100%.

Group of orthologs #3125. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 D.pseudoobscura:47

F6X986              	100.00%		Q29IR5              	100.00%
Bootstrap support for F6X986 as seed ortholog is 100%.
Bootstrap support for Q29IR5 as seed ortholog is 94%.

Group of orthologs #3126. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:141

H2XRT6              	100.00%		Q290L7              	100.00%
Bootstrap support for H2XRT6 as seed ortholog is 100%.
Bootstrap support for Q290L7 as seed ortholog is 100%.

Group of orthologs #3127. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 D.pseudoobscura:67

H2XLG8              	100.00%		Q29FZ0              	100.00%
Bootstrap support for H2XLG8 as seed ortholog is 82%.
Bootstrap support for Q29FZ0 as seed ortholog is 98%.

Group of orthologs #3128. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:141

F7BMH5              	100.00%		Q29L14              	100.00%
Bootstrap support for F7BMH5 as seed ortholog is 100%.
Bootstrap support for Q29L14 as seed ortholog is 100%.

Group of orthologs #3129. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:141

H2XZI6              	100.00%		Q29EN1              	100.00%
Bootstrap support for H2XZI6 as seed ortholog is 100%.
Bootstrap support for Q29EN1 as seed ortholog is 100%.

Group of orthologs #3130. Best score 141 bits
Score difference with first non-orthologous sequence - C.intestinalis:141 D.pseudoobscura:99

H2Y0C3              	100.00%		Q2LZD3              	100.00%
Bootstrap support for H2Y0C3 as seed ortholog is 100%.
Bootstrap support for Q2LZD3 as seed ortholog is 100%.

Group of orthologs #3131. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 D.pseudoobscura:140

F6TUT9              	100.00%		Q293X7              	100.00%
                    	       		B5DWZ8              	37.42%
                    	       		B5DWZ9              	26.83%
                    	       		I5APV7              	23.67%
Bootstrap support for F6TUT9 as seed ortholog is 100%.
Bootstrap support for Q293X7 as seed ortholog is 100%.

Group of orthologs #3132. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 D.pseudoobscura:140

F6QJH8              	100.00%		B5DKJ3              	100.00%
Bootstrap support for F6QJH8 as seed ortholog is 100%.
Bootstrap support for B5DKJ3 as seed ortholog is 100%.

Group of orthologs #3133. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 D.pseudoobscura:140

F6PP67              	100.00%		Q297K4              	100.00%
Bootstrap support for F6PP67 as seed ortholog is 100%.
Bootstrap support for Q297K4 as seed ortholog is 100%.

Group of orthologs #3134. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 D.pseudoobscura:140

F6QFI4              	100.00%		Q29HS9              	100.00%
Bootstrap support for F6QFI4 as seed ortholog is 100%.
Bootstrap support for Q29HS9 as seed ortholog is 100%.

Group of orthologs #3135. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 D.pseudoobscura:140

H2XKA1              	100.00%		I5AMN4              	100.00%
Bootstrap support for H2XKA1 as seed ortholog is 100%.
Bootstrap support for I5AMN4 as seed ortholog is 100%.

Group of orthologs #3136. Best score 140 bits
Score difference with first non-orthologous sequence - C.intestinalis:140 D.pseudoobscura:140

F6YX11              	100.00%		Q29B72              	100.00%
Bootstrap support for F6YX11 as seed ortholog is 100%.
Bootstrap support for Q29B72 as seed ortholog is 100%.

Group of orthologs #3137. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:62

F6VIC3              	100.00%		Q29G91              	100.00%
                    	       		B5DJE0              	23.95%
Bootstrap support for F6VIC3 as seed ortholog is 100%.
Bootstrap support for Q29G91 as seed ortholog is 96%.

Group of orthologs #3138. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:139

H2Y0H7              	100.00%		B5DQ38              	100.00%
                    	       		B5DXU0              	51.94%
Bootstrap support for H2Y0H7 as seed ortholog is 100%.
Bootstrap support for B5DQ38 as seed ortholog is 100%.

Group of orthologs #3139. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:87

F6QGW5              	100.00%		Q292E1              	100.00%
Bootstrap support for F6QGW5 as seed ortholog is 100%.
Bootstrap support for Q292E1 as seed ortholog is 99%.

Group of orthologs #3140. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:139

F6QXL1              	100.00%		Q29KQ2              	100.00%
Bootstrap support for F6QXL1 as seed ortholog is 100%.
Bootstrap support for Q29KQ2 as seed ortholog is 100%.

Group of orthologs #3141. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:139

F6SAD5              	100.00%		Q29JQ2              	100.00%
Bootstrap support for F6SAD5 as seed ortholog is 100%.
Bootstrap support for Q29JQ2 as seed ortholog is 100%.

Group of orthologs #3142. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:58

H2Y060              	100.00%		B5DKE6              	100.00%
Bootstrap support for H2Y060 as seed ortholog is 100%.
Bootstrap support for B5DKE6 as seed ortholog is 98%.

Group of orthologs #3143. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:139

F6ZBW6              	100.00%		Q295M0              	100.00%
Bootstrap support for F6ZBW6 as seed ortholog is 100%.
Bootstrap support for Q295M0 as seed ortholog is 100%.

Group of orthologs #3144. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:139

H2XJW9              	100.00%		Q28X46              	100.00%
Bootstrap support for H2XJW9 as seed ortholog is 100%.
Bootstrap support for Q28X46 as seed ortholog is 100%.

Group of orthologs #3145. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:139

F7APG8              	100.00%		Q294K9              	100.00%
Bootstrap support for F7APG8 as seed ortholog is 100%.
Bootstrap support for Q294K9 as seed ortholog is 100%.

Group of orthologs #3146. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:139

F7APY2              	100.00%		Q29MH9              	100.00%
Bootstrap support for F7APY2 as seed ortholog is 100%.
Bootstrap support for Q29MH9 as seed ortholog is 100%.

Group of orthologs #3147. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:139

H2XUI3              	100.00%		Q29M38              	100.00%
Bootstrap support for H2XUI3 as seed ortholog is 100%.
Bootstrap support for Q29M38 as seed ortholog is 100%.

Group of orthologs #3148. Best score 139 bits
Score difference with first non-orthologous sequence - C.intestinalis:139 D.pseudoobscura:139

Q4H329              	100.00%		Q29K08              	100.00%
Bootstrap support for Q4H329 as seed ortholog is 100%.
Bootstrap support for Q29K08 as seed ortholog is 100%.

Group of orthologs #3149. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 D.pseudoobscura:16

F6UFK1              	100.00%		Q29BP5              	100.00%
                    	       		B5DYA0              	27.84%
                    	       		Q29C28              	10.37%
                    	       		Q29AC5              	5.97%
Bootstrap support for F6UFK1 as seed ortholog is 78%.
Bootstrap support for Q29BP5 as seed ortholog is 67%.
Alternative seed ortholog is Q2M0D7 (16 bits away from this cluster)

Group of orthologs #3150. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:138

F6RPC5              	100.00%		B5DNK4              	100.00%
Bootstrap support for F6RPC5 as seed ortholog is 100%.
Bootstrap support for B5DNK4 as seed ortholog is 100%.

Group of orthologs #3151. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:138

F6X873              	100.00%		B5DRQ5              	100.00%
Bootstrap support for F6X873 as seed ortholog is 100%.
Bootstrap support for B5DRQ5 as seed ortholog is 100%.

Group of orthologs #3152. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:95

F6QXX8              	100.00%		Q29LT5              	100.00%
Bootstrap support for F6QXX8 as seed ortholog is 100%.
Bootstrap support for Q29LT5 as seed ortholog is 100%.

Group of orthologs #3153. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:29

F6QLN4              	100.00%		Q29P73              	100.00%
Bootstrap support for F6QLN4 as seed ortholog is 100%.
Bootstrap support for Q29P73 as seed ortholog is 41%.
Alternative seed ortholog is Q297G2 (29 bits away from this cluster)

Group of orthologs #3154. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:138

F7A9A6              	100.00%		Q29BE9              	100.00%
Bootstrap support for F7A9A6 as seed ortholog is 100%.
Bootstrap support for Q29BE9 as seed ortholog is 100%.

Group of orthologs #3155. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:138

F6W074              	100.00%		Q29MY3              	100.00%
Bootstrap support for F6W074 as seed ortholog is 100%.
Bootstrap support for Q29MY3 as seed ortholog is 100%.

Group of orthologs #3156. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:70

H2XSA5              	100.00%		Q28XW8              	100.00%
Bootstrap support for H2XSA5 as seed ortholog is 100%.
Bootstrap support for Q28XW8 as seed ortholog is 100%.

Group of orthologs #3157. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:138

H2XQM2              	100.00%		Q29B51              	100.00%
Bootstrap support for H2XQM2 as seed ortholog is 100%.
Bootstrap support for Q29B51 as seed ortholog is 100%.

Group of orthologs #3158. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:138

H2XMF4              	100.00%		Q29EP9              	100.00%
Bootstrap support for H2XMF4 as seed ortholog is 100%.
Bootstrap support for Q29EP9 as seed ortholog is 100%.

Group of orthologs #3159. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:138

F6ZY66              	100.00%		Q2M0P6              	100.00%
Bootstrap support for F6ZY66 as seed ortholog is 100%.
Bootstrap support for Q2M0P6 as seed ortholog is 100%.

Group of orthologs #3160. Best score 138 bits
Score difference with first non-orthologous sequence - C.intestinalis:138 D.pseudoobscura:138

H2Y2U3              	100.00%		Q8I1E5              	100.00%
Bootstrap support for H2Y2U3 as seed ortholog is 100%.
Bootstrap support for Q8I1E5 as seed ortholog is 100%.

Group of orthologs #3161. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:137

F6PZL2              	100.00%		Q295E9              	100.00%
Bootstrap support for F6PZL2 as seed ortholog is 100%.
Bootstrap support for Q295E9 as seed ortholog is 100%.

Group of orthologs #3162. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:137

F6RQS4              	100.00%		Q293T0              	100.00%
Bootstrap support for F6RQS4 as seed ortholog is 100%.
Bootstrap support for Q293T0 as seed ortholog is 100%.

Group of orthologs #3163. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:137

F6Z6N2              	100.00%		B5DWP2              	100.00%
Bootstrap support for F6Z6N2 as seed ortholog is 100%.
Bootstrap support for B5DWP2 as seed ortholog is 100%.

Group of orthologs #3164. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:137

F6SF30              	100.00%		Q29BS1              	100.00%
Bootstrap support for F6SF30 as seed ortholog is 100%.
Bootstrap support for Q29BS1 as seed ortholog is 100%.

Group of orthologs #3165. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:72

F6VBR9              	100.00%		Q29KK9              	100.00%
Bootstrap support for F6VBR9 as seed ortholog is 100%.
Bootstrap support for Q29KK9 as seed ortholog is 96%.

Group of orthologs #3166. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:137

F7A8B4              	100.00%		Q299L1              	100.00%
Bootstrap support for F7A8B4 as seed ortholog is 100%.
Bootstrap support for Q299L1 as seed ortholog is 100%.

Group of orthologs #3167. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 D.pseudoobscura:137

F7ATJ8              	100.00%		Q29DI8              	100.00%
Bootstrap support for F7ATJ8 as seed ortholog is 75%.
Bootstrap support for Q29DI8 as seed ortholog is 100%.

Group of orthologs #3168. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:137

H2XVX0              	100.00%		I5APQ5              	100.00%
Bootstrap support for H2XVX0 as seed ortholog is 100%.
Bootstrap support for I5APQ5 as seed ortholog is 100%.

Group of orthologs #3169. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:137

F7BMN7              	100.00%		Q29IG5              	100.00%
Bootstrap support for F7BMN7 as seed ortholog is 100%.
Bootstrap support for Q29IG5 as seed ortholog is 100%.

Group of orthologs #3170. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:137

H2XRY8              	100.00%		Q29GS2              	100.00%
Bootstrap support for H2XRY8 as seed ortholog is 100%.
Bootstrap support for Q29GS2 as seed ortholog is 100%.

Group of orthologs #3171. Best score 137 bits
Score difference with first non-orthologous sequence - C.intestinalis:137 D.pseudoobscura:137

H2XM97              	100.00%		Q2LZ82              	100.00%
Bootstrap support for H2XM97 as seed ortholog is 100%.
Bootstrap support for Q2LZ82 as seed ortholog is 100%.

Group of orthologs #3172. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 D.pseudoobscura:18

F6TCC8              	100.00%		Q295E4              	100.00%
                    	       		Q299G4              	35.54%
                    	       		Q294N1              	20.86%
                    	       		B5DWB5              	20.58%
                    	       		Q29FX7              	15.40%
                    	       		Q299U3              	13.67%
                    	       		Q29C29              	11.80%
Bootstrap support for F6TCC8 as seed ortholog is 68%.
Alternative seed ortholog is F6S741 (23 bits away from this cluster)
Bootstrap support for Q295E4 as seed ortholog is 68%.
Alternative seed ortholog is Q299R1 (18 bits away from this cluster)

Group of orthologs #3173. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 D.pseudoobscura:73

F6Y403              	100.00%		Q294S7              	100.00%
H2XPY5              	26.57%		
F6UMQ0              	8.54%		
Bootstrap support for F6Y403 as seed ortholog is 100%.
Bootstrap support for Q294S7 as seed ortholog is 95%.

Group of orthologs #3174. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 D.pseudoobscura:136

F6QD44              	100.00%		Q291N9              	100.00%
                    	       		Q291N8              	21.76%
Bootstrap support for F6QD44 as seed ortholog is 100%.
Bootstrap support for Q291N9 as seed ortholog is 100%.

Group of orthologs #3175. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 D.pseudoobscura:136

H2XNI9              	100.00%		B5DXA7              	100.00%
                    	       		Q29IW0              	100.00%
Bootstrap support for H2XNI9 as seed ortholog is 100%.
Bootstrap support for B5DXA7 as seed ortholog is 100%.
Bootstrap support for Q29IW0 as seed ortholog is 100%.

Group of orthologs #3176. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 D.pseudoobscura:74

F6T3M2              	100.00%		Q29BA1              	100.00%
Bootstrap support for F6T3M2 as seed ortholog is 90%.
Bootstrap support for Q29BA1 as seed ortholog is 98%.

Group of orthologs #3177. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 D.pseudoobscura:136

F6YDH8              	100.00%		Q28ZW9              	100.00%
Bootstrap support for F6YDH8 as seed ortholog is 100%.
Bootstrap support for Q28ZW9 as seed ortholog is 100%.

Group of orthologs #3178. Best score 136 bits
Score difference with first non-orthologous sequence - C.intestinalis:136 D.pseudoobscura:136

F6Z0L2              	100.00%		Q2M0W4              	100.00%
Bootstrap support for F6Z0L2 as seed ortholog is 100%.
Bootstrap support for Q2M0W4 as seed ortholog is 100%.

Group of orthologs #3179. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 D.pseudoobscura:35

F6Z8B6              	100.00%		Q28Z16              	100.00%
F6WRW7              	100.00%		Q28YS9              	100.00%
F6XUL4              	14.50%		Q28YT0              	38.31%
F7AE92              	11.88%		Q28YR2              	33.96%
F7B3N6              	10.00%		Q28YT1              	28.25%
F6RAJ1              	6.56%		Q28YS7              	26.95%
                    	       		Q28YS5              	25.65%
                    	       		Q28YS6              	24.68%
                    	       		B5DZR7              	22.40%
                    	       		Q28YS8              	21.43%
                    	       		Q28ZB5              	15.09%
                    	       		Q29B41              	5.52%
                    	       		Q29B43              	5.52%
Bootstrap support for F6Z8B6 as seed ortholog is 99%.
Bootstrap support for F6WRW7 as seed ortholog is 99%.
Bootstrap support for Q28Z16 as seed ortholog is 88%.
Bootstrap support for Q28YS9 as seed ortholog is 86%.

Group of orthologs #3180. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 D.pseudoobscura:25

F6Q1C2              	100.00%		B5DJP9              	100.00%
                    	       		B5DJP7              	34.84%
                    	       		Q29JV4              	27.17%
                    	       		Q29PB2              	26.16%
                    	       		B5DNC9              	21.89%
                    	       		B5DPC0              	20.63%
                    	       		B5DKB1              	17.23%
                    	       		Q298Y7              	17.23%
Bootstrap support for F6Q1C2 as seed ortholog is 88%.
Bootstrap support for B5DJP9 as seed ortholog is 74%.
Alternative seed ortholog is Q29F09 (25 bits away from this cluster)

Group of orthologs #3181. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 D.pseudoobscura:135

F6XQP8              	100.00%		Q29BX8              	100.00%
Bootstrap support for F6XQP8 as seed ortholog is 100%.
Bootstrap support for Q29BX8 as seed ortholog is 100%.

Group of orthologs #3182. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 D.pseudoobscura:135

H2XRG4              	100.00%		B5DZ45              	100.00%
Bootstrap support for H2XRG4 as seed ortholog is 100%.
Bootstrap support for B5DZ45 as seed ortholog is 100%.

Group of orthologs #3183. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 D.pseudoobscura:135

H2XY86              	100.00%		Q295U9              	100.00%
Bootstrap support for H2XY86 as seed ortholog is 94%.
Bootstrap support for Q295U9 as seed ortholog is 100%.

Group of orthologs #3184. Best score 135 bits
Score difference with first non-orthologous sequence - C.intestinalis:135 D.pseudoobscura:135

H2XW59              	100.00%		Q29PG7              	100.00%
Bootstrap support for H2XW59 as seed ortholog is 100%.
Bootstrap support for Q29PG7 as seed ortholog is 100%.

Group of orthologs #3185. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:134

F6SVI8              	100.00%		B5DI68              	100.00%
Bootstrap support for F6SVI8 as seed ortholog is 100%.
Bootstrap support for B5DI68 as seed ortholog is 100%.

Group of orthologs #3186. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:134

F6UFU8              	100.00%		B5DLW4              	100.00%
Bootstrap support for F6UFU8 as seed ortholog is 100%.
Bootstrap support for B5DLW4 as seed ortholog is 100%.

Group of orthologs #3187. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:134

F6V9L7              	100.00%		I5AMQ8              	100.00%
Bootstrap support for F6V9L7 as seed ortholog is 100%.
Bootstrap support for I5AMQ8 as seed ortholog is 100%.

Group of orthologs #3188. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:134

H2XMY1              	100.00%		B5DM26              	100.00%
Bootstrap support for H2XMY1 as seed ortholog is 100%.
Bootstrap support for B5DM26 as seed ortholog is 100%.

Group of orthologs #3189. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 D.pseudoobscura:43

F6T5I8              	100.00%		Q29JJ1              	100.00%
Bootstrap support for F6T5I8 as seed ortholog is 98%.
Bootstrap support for Q29JJ1 as seed ortholog is 87%.

Group of orthologs #3190. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:134

H2XUG0              	100.00%		B5DS13              	100.00%
Bootstrap support for H2XUG0 as seed ortholog is 100%.
Bootstrap support for B5DS13 as seed ortholog is 100%.

Group of orthologs #3191. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:134

F6TIT1              	100.00%		Q29M04              	100.00%
Bootstrap support for F6TIT1 as seed ortholog is 100%.
Bootstrap support for Q29M04 as seed ortholog is 100%.

Group of orthologs #3192. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:134

F6WUB5              	100.00%		Q29FY5              	100.00%
Bootstrap support for F6WUB5 as seed ortholog is 100%.
Bootstrap support for Q29FY5 as seed ortholog is 100%.

Group of orthologs #3193. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:134

H2Y0K8              	100.00%		B5DQT7              	100.00%
Bootstrap support for H2Y0K8 as seed ortholog is 100%.
Bootstrap support for B5DQT7 as seed ortholog is 100%.

Group of orthologs #3194. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:134

F6Y7F7              	100.00%		Q29FT9              	100.00%
Bootstrap support for F6Y7F7 as seed ortholog is 100%.
Bootstrap support for Q29FT9 as seed ortholog is 100%.

Group of orthologs #3195. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:134

H2XVR3              	100.00%		Q28WR4              	100.00%
Bootstrap support for H2XVR3 as seed ortholog is 100%.
Bootstrap support for Q28WR4 as seed ortholog is 100%.

Group of orthologs #3196. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:134

F7B7M7              	100.00%		Q29L49              	100.00%
Bootstrap support for F7B7M7 as seed ortholog is 100%.
Bootstrap support for Q29L49 as seed ortholog is 100%.

Group of orthologs #3197. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:134

H2Y1L9              	100.00%		Q295R8              	100.00%
Bootstrap support for H2Y1L9 as seed ortholog is 100%.
Bootstrap support for Q295R8 as seed ortholog is 100%.

Group of orthologs #3198. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:134

F7BJB6              	100.00%		Q2M069              	100.00%
Bootstrap support for F7BJB6 as seed ortholog is 100%.
Bootstrap support for Q2M069 as seed ortholog is 100%.

Group of orthologs #3199. Best score 134 bits
Score difference with first non-orthologous sequence - C.intestinalis:134 D.pseudoobscura:134

H2Y3T4              	100.00%		Q29A29              	100.00%
Bootstrap support for H2Y3T4 as seed ortholog is 100%.
Bootstrap support for Q29A29 as seed ortholog is 100%.

Group of orthologs #3200. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 D.pseudoobscura:36

F6YTW2              	100.00%		B5DQN7              	100.00%
Q95P33              	50.28%		P28680              	11.66%
                    	       		P29404              	10.21%
                    	       		Q29NJ0              	7.65%
                    	       		P28679              	7.53%
                    	       		P28678              	6.44%
                    	       		B5DVZ5              	5.83%
Bootstrap support for F6YTW2 as seed ortholog is 82%.
Bootstrap support for B5DQN7 as seed ortholog is 83%.

Group of orthologs #3201. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 D.pseudoobscura:7

F6V890              	100.00%		Q29IZ5              	100.00%
F6ZMB2              	14.04%		
H2XR98              	9.44%		
F7AZI0              	7.99%		
Bootstrap support for F6V890 as seed ortholog is 63%.
Alternative seed ortholog is F6PJL4 (10 bits away from this cluster)
Bootstrap support for Q29IZ5 as seed ortholog is 60%.
Alternative seed ortholog is Q29CB1 (7 bits away from this cluster)

Group of orthologs #3202. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 D.pseudoobscura:49

F7AEJ9              	100.00%		B5DYV3              	100.00%
                    	       		Q298Q6              	13.55%
                    	       		B5DXA9              	5.52%
Bootstrap support for F7AEJ9 as seed ortholog is 74%.
Alternative seed ortholog is F6YH71 (14 bits away from this cluster)
Bootstrap support for B5DYV3 as seed ortholog is 95%.

Group of orthologs #3203. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:40

F6Q249              	100.00%		B5DUZ5              	100.00%
                    	       		Q29FG0              	15.17%
Bootstrap support for F6Q249 as seed ortholog is 100%.
Bootstrap support for B5DUZ5 as seed ortholog is 84%.

Group of orthologs #3204. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:133

F6V6L4              	100.00%		Q29F08              	100.00%
                    	       		B5DYW8              	9.74%
Bootstrap support for F6V6L4 as seed ortholog is 100%.
Bootstrap support for Q29F08 as seed ortholog is 100%.

Group of orthologs #3205. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:133

F7ATI9              	100.00%		Q28XR3              	100.00%
F6Y7P7              	6.80%		
Bootstrap support for F7ATI9 as seed ortholog is 100%.
Bootstrap support for Q28XR3 as seed ortholog is 100%.

Group of orthologs #3206. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:133

H2XLU9              	100.00%		Q29DE9              	100.00%
                    	       		B5DYA2              	60.43%
Bootstrap support for H2XLU9 as seed ortholog is 100%.
Bootstrap support for Q29DE9 as seed ortholog is 100%.

Group of orthologs #3207. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:133

F6X5P6              	100.00%		B5DYC6              	100.00%
Bootstrap support for F6X5P6 as seed ortholog is 100%.
Bootstrap support for B5DYC6 as seed ortholog is 100%.

Group of orthologs #3208. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:133

F6TDH1              	100.00%		Q299N8              	100.00%
Bootstrap support for F6TDH1 as seed ortholog is 100%.
Bootstrap support for Q299N8 as seed ortholog is 100%.

Group of orthologs #3209. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:133

F6YV39              	100.00%		Q28WL7              	100.00%
Bootstrap support for F6YV39 as seed ortholog is 100%.
Bootstrap support for Q28WL7 as seed ortholog is 100%.

Group of orthologs #3210. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:133

F6UJ88              	100.00%		Q29FC8              	100.00%
Bootstrap support for F6UJ88 as seed ortholog is 100%.
Bootstrap support for Q29FC8 as seed ortholog is 100%.

Group of orthologs #3211. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:133

F7AF59              	100.00%		Q28YY4              	100.00%
Bootstrap support for F7AF59 as seed ortholog is 100%.
Bootstrap support for Q28YY4 as seed ortholog is 100%.

Group of orthologs #3212. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:133

H2XU70              	100.00%		B5DVQ1              	100.00%
Bootstrap support for H2XU70 as seed ortholog is 100%.
Bootstrap support for B5DVQ1 as seed ortholog is 100%.

Group of orthologs #3213. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:133

H2XK93              	100.00%		Q290G1              	100.00%
Bootstrap support for H2XK93 as seed ortholog is 100%.
Bootstrap support for Q290G1 as seed ortholog is 100%.

Group of orthologs #3214. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:133

F7A9N7              	100.00%		Q29CY0              	100.00%
Bootstrap support for F7A9N7 as seed ortholog is 100%.
Bootstrap support for Q29CY0 as seed ortholog is 100%.

Group of orthologs #3215. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:42

H2XM22              	100.00%		Q296P2              	100.00%
Bootstrap support for H2XM22 as seed ortholog is 100%.
Bootstrap support for Q296P2 as seed ortholog is 99%.

Group of orthologs #3216. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:133

H2XX93              	100.00%		Q29G23              	100.00%
Bootstrap support for H2XX93 as seed ortholog is 100%.
Bootstrap support for Q29G23 as seed ortholog is 100%.

Group of orthologs #3217. Best score 133 bits
Score difference with first non-orthologous sequence - C.intestinalis:133 D.pseudoobscura:133

H2XPH6              	100.00%		Q2LYI8              	100.00%
Bootstrap support for H2XPH6 as seed ortholog is 100%.
Bootstrap support for Q2LYI8 as seed ortholog is 100%.

Group of orthologs #3218. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 D.pseudoobscura:132

F6Y8T6              	100.00%		B5DJ86              	100.00%
Bootstrap support for F6Y8T6 as seed ortholog is 100%.
Bootstrap support for B5DJ86 as seed ortholog is 100%.

Group of orthologs #3219. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 D.pseudoobscura:70

F6S2Y7              	100.00%		Q293F1              	100.00%
Bootstrap support for F6S2Y7 as seed ortholog is 100%.
Bootstrap support for Q293F1 as seed ortholog is 99%.

Group of orthologs #3220. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 D.pseudoobscura:59

F6YIF4              	100.00%		Q29A43              	100.00%
Bootstrap support for F6YIF4 as seed ortholog is 82%.
Bootstrap support for Q29A43 as seed ortholog is 94%.

Group of orthologs #3221. Best score 132 bits
Score difference with first non-orthologous sequence - C.intestinalis:132 D.pseudoobscura:132

H2XPC5              	100.00%		Q29I36              	100.00%
Bootstrap support for H2XPC5 as seed ortholog is 100%.
Bootstrap support for Q29I36 as seed ortholog is 100%.

Group of orthologs #3222. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 D.pseudoobscura:131

F6RGL3              	100.00%		B5DJT4              	100.00%
                    	       		B5DTL8              	38.71%
                    	       		B5DHC0              	32.99%
                    	       		B5DHE1              	32.26%
                    	       		B5DHD0              	29.77%
                    	       		B5DHF5              	28.01%
                    	       		B5DHE5              	21.41%
                    	       		Q291A2              	11.14%
Bootstrap support for F6RGL3 as seed ortholog is 85%.
Bootstrap support for B5DJT4 as seed ortholog is 100%.

Group of orthologs #3223. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 D.pseudoobscura:45

F7A4D7              	100.00%		Q299T2              	100.00%
H2XKS7              	100.00%		
F6VBN4              	79.16%		
Bootstrap support for F7A4D7 as seed ortholog is 97%.
Bootstrap support for H2XKS7 as seed ortholog is 96%.
Bootstrap support for Q299T2 as seed ortholog is 84%.

Group of orthologs #3224. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:131

F6QE53              	100.00%		Q299J7              	100.00%
Bootstrap support for F6QE53 as seed ortholog is 100%.
Bootstrap support for Q299J7 as seed ortholog is 100%.

Group of orthologs #3225. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:131

F6TVK0              	100.00%		Q299D1              	100.00%
Bootstrap support for F6TVK0 as seed ortholog is 100%.
Bootstrap support for Q299D1 as seed ortholog is 100%.

Group of orthologs #3226. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:131

F6XCN2              	100.00%		Q28YR8              	100.00%
Bootstrap support for F6XCN2 as seed ortholog is 100%.
Bootstrap support for Q28YR8 as seed ortholog is 100%.

Group of orthologs #3227. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:131

F6TJ31              	100.00%		Q29DC0              	100.00%
Bootstrap support for F6TJ31 as seed ortholog is 100%.
Bootstrap support for Q29DC0 as seed ortholog is 100%.

Group of orthologs #3228. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:131

F6Z5D4              	100.00%		Q28Z13              	100.00%
Bootstrap support for F6Z5D4 as seed ortholog is 100%.
Bootstrap support for Q28Z13 as seed ortholog is 100%.

Group of orthologs #3229. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:131

F6VQ55              	100.00%		Q29CN6              	100.00%
Bootstrap support for F6VQ55 as seed ortholog is 100%.
Bootstrap support for Q29CN6 as seed ortholog is 100%.

Group of orthologs #3230. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:131

F6YRC1              	100.00%		Q299E0              	100.00%
Bootstrap support for F6YRC1 as seed ortholog is 100%.
Bootstrap support for Q299E0 as seed ortholog is 100%.

Group of orthologs #3231. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:131

H2XQ66              	100.00%		Q298P7              	100.00%
Bootstrap support for H2XQ66 as seed ortholog is 100%.
Bootstrap support for Q298P7 as seed ortholog is 100%.

Group of orthologs #3232. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:131

H2XWE7              	100.00%		Q296F1              	100.00%
Bootstrap support for H2XWE7 as seed ortholog is 100%.
Bootstrap support for Q296F1 as seed ortholog is 100%.

Group of orthologs #3233. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:131

H2XSN2              	100.00%		Q29CN4              	100.00%
Bootstrap support for H2XSN2 as seed ortholog is 100%.
Bootstrap support for Q29CN4 as seed ortholog is 100%.

Group of orthologs #3234. Best score 131 bits
Score difference with first non-orthologous sequence - C.intestinalis:131 D.pseudoobscura:131

H2XWF6              	100.00%		Q29N58              	100.00%
Bootstrap support for H2XWF6 as seed ortholog is 100%.
Bootstrap support for Q29N58 as seed ortholog is 100%.

Group of orthologs #3235. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 D.pseudoobscura:130

F6VUE0              	100.00%		B5DVG2              	100.00%
F6VUE2              	23.42%		
Bootstrap support for F6VUE0 as seed ortholog is 100%.
Bootstrap support for B5DVG2 as seed ortholog is 100%.

Group of orthologs #3236. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 D.pseudoobscura:19

F6RBZ6              	100.00%		Q297H8              	100.00%
Bootstrap support for F6RBZ6 as seed ortholog is 73%.
Alternative seed ortholog is Q4H2T4 (16 bits away from this cluster)
Bootstrap support for Q297H8 as seed ortholog is 73%.
Alternative seed ortholog is Q29AF0 (19 bits away from this cluster)

Group of orthologs #3237. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 D.pseudoobscura:130

F6U3A5              	100.00%		Q28Z80              	100.00%
Bootstrap support for F6U3A5 as seed ortholog is 100%.
Bootstrap support for Q28Z80 as seed ortholog is 100%.

Group of orthologs #3238. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 D.pseudoobscura:56

F6TXK6              	100.00%		Q292K4              	100.00%
Bootstrap support for F6TXK6 as seed ortholog is 100%.
Bootstrap support for Q292K4 as seed ortholog is 99%.

Group of orthologs #3239. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 D.pseudoobscura:130

F6ZV18              	100.00%		B5E129              	100.00%
Bootstrap support for F6ZV18 as seed ortholog is 100%.
Bootstrap support for B5E129 as seed ortholog is 100%.

Group of orthologs #3240. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 D.pseudoobscura:130

F6WT81              	100.00%		Q294X6              	100.00%
Bootstrap support for F6WT81 as seed ortholog is 100%.
Bootstrap support for Q294X6 as seed ortholog is 100%.

Group of orthologs #3241. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 D.pseudoobscura:130

F6YE24              	100.00%		Q29CE7              	100.00%
Bootstrap support for F6YE24 as seed ortholog is 100%.
Bootstrap support for Q29CE7 as seed ortholog is 100%.

Group of orthologs #3242. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 D.pseudoobscura:130

F6UJF1              	100.00%		Q2M0G5              	100.00%
Bootstrap support for F6UJF1 as seed ortholog is 100%.
Bootstrap support for Q2M0G5 as seed ortholog is 100%.

Group of orthologs #3243. Best score 130 bits
Score difference with first non-orthologous sequence - C.intestinalis:130 D.pseudoobscura:130

F6WIJ0              	100.00%		Q29MZ0              	100.00%
Bootstrap support for F6WIJ0 as seed ortholog is 100%.
Bootstrap support for Q29MZ0 as seed ortholog is 100%.

Group of orthologs #3244. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 D.pseudoobscura:42

Q1RLI8              	100.00%		Q2LZF0              	100.00%
                    	       		Q29FI7              	61.38%
                    	       		Q2LZF2              	52.61%
                    	       		Q29FI6              	45.17%
                    	       		B5DP39              	5.23%
Bootstrap support for Q1RLI8 as seed ortholog is 96%.
Bootstrap support for Q2LZF0 as seed ortholog is 84%.

Group of orthologs #3245. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

F6ST26              	100.00%		Q29P10              	100.00%
                    	       		Q29KL5              	39.19%
                    	       		Q29P11              	21.27%
                    	       		B5DKX2              	13.88%
Bootstrap support for F6ST26 as seed ortholog is 100%.
Bootstrap support for Q29P10 as seed ortholog is 100%.

Group of orthologs #3246. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

F6SBE5              	100.00%		Q29A88              	100.00%
                    	       		B5DP20              	20.52%
                    	       		Q2M0G8              	13.60%
Bootstrap support for F6SBE5 as seed ortholog is 100%.
Bootstrap support for Q29A88 as seed ortholog is 100%.

Group of orthologs #3247. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

F6PXS4              	100.00%		Q29K58              	100.00%
                    	       		B5DK15              	17.34%
                    	       		B5DK16              	16.16%
Bootstrap support for F6PXS4 as seed ortholog is 100%.
Bootstrap support for Q29K58 as seed ortholog is 100%.

Group of orthologs #3248. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

H2XKS6              	100.00%		B5DX54              	100.00%
                    	       		B5DYD5              	100.00%
Bootstrap support for H2XKS6 as seed ortholog is 100%.
Bootstrap support for B5DX54 as seed ortholog is 100%.
Bootstrap support for B5DYD5 as seed ortholog is 100%.

Group of orthologs #3249. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:58

F6T4U7              	100.00%		Q29MN0              	100.00%
F6ZUV3              	25.91%		
Bootstrap support for F6T4U7 as seed ortholog is 100%.
Bootstrap support for Q29MN0 as seed ortholog is 95%.

Group of orthologs #3250. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 D.pseudoobscura:36

F6R955              	100.00%		B5DLM1              	100.00%
Bootstrap support for F6R955 as seed ortholog is 60%.
Alternative seed ortholog is F6T2A6 (6 bits away from this cluster)
Bootstrap support for B5DLM1 as seed ortholog is 94%.

Group of orthologs #3251. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

F6VYK8              	100.00%		B5DNN0              	100.00%
Bootstrap support for F6VYK8 as seed ortholog is 100%.
Bootstrap support for B5DNN0 as seed ortholog is 100%.

Group of orthologs #3252. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

F6UTS4              	100.00%		B5DR16              	100.00%
Bootstrap support for F6UTS4 as seed ortholog is 100%.
Bootstrap support for B5DR16 as seed ortholog is 100%.

Group of orthologs #3253. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

F6VN25              	100.00%		B5DQ61              	100.00%
Bootstrap support for F6VN25 as seed ortholog is 100%.
Bootstrap support for B5DQ61 as seed ortholog is 100%.

Group of orthologs #3254. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:28

F6SST4              	100.00%		Q28YJ0              	100.00%
Bootstrap support for F6SST4 as seed ortholog is 100%.
Bootstrap support for Q28YJ0 as seed ortholog is 90%.

Group of orthologs #3255. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

F6UC03              	100.00%		Q293W2              	100.00%
Bootstrap support for F6UC03 as seed ortholog is 100%.
Bootstrap support for Q293W2 as seed ortholog is 100%.

Group of orthologs #3256. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

F6QW33              	100.00%		Q29LM0              	100.00%
Bootstrap support for F6QW33 as seed ortholog is 100%.
Bootstrap support for Q29LM0 as seed ortholog is 100%.

Group of orthologs #3257. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 D.pseudoobscura:129

F6TPM4              	100.00%		Q29GN7              	100.00%
Bootstrap support for F6TPM4 as seed ortholog is 92%.
Bootstrap support for Q29GN7 as seed ortholog is 100%.

Group of orthologs #3258. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:61

F6SV73              	100.00%		Q29JF5              	100.00%
Bootstrap support for F6SV73 as seed ortholog is 100%.
Bootstrap support for Q29JF5 as seed ortholog is 95%.

Group of orthologs #3259. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

F6S593              	100.00%		Q29NS8              	100.00%
Bootstrap support for F6S593 as seed ortholog is 100%.
Bootstrap support for Q29NS8 as seed ortholog is 100%.

Group of orthologs #3260. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

H2XRI7              	100.00%		I7M5V3              	100.00%
Bootstrap support for H2XRI7 as seed ortholog is 100%.
Bootstrap support for I7M5V3 as seed ortholog is 100%.

Group of orthologs #3261. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

F6WQD2              	100.00%		Q29ND3              	100.00%
Bootstrap support for F6WQD2 as seed ortholog is 100%.
Bootstrap support for Q29ND3 as seed ortholog is 100%.

Group of orthologs #3262. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

H2XL05              	100.00%		Q29F00              	100.00%
Bootstrap support for H2XL05 as seed ortholog is 100%.
Bootstrap support for Q29F00 as seed ortholog is 100%.

Group of orthologs #3263. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

F7BNU5              	100.00%		Q29JG5              	100.00%
Bootstrap support for F7BNU5 as seed ortholog is 100%.
Bootstrap support for Q29JG5 as seed ortholog is 100%.

Group of orthologs #3264. Best score 129 bits
Score difference with first non-orthologous sequence - C.intestinalis:129 D.pseudoobscura:129

H2XTC9              	100.00%		Q29JW8              	100.00%
Bootstrap support for H2XTC9 as seed ortholog is 100%.
Bootstrap support for Q29JW8 as seed ortholog is 100%.

Group of orthologs #3265. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:128

F6RJU6              	100.00%		B5DRU2              	100.00%
                    	       		B5DRU6              	25.54%
                    	       		B5DRU8              	22.57%
                    	       		B5DRU7              	22.18%
                    	       		B5DRU3              	13.07%
                    	       		B5DRU5              	11.88%
Bootstrap support for F6RJU6 as seed ortholog is 100%.
Bootstrap support for B5DRU2 as seed ortholog is 100%.

Group of orthologs #3266. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:79

H2XY63              	100.00%		B5DLM8              	100.00%
H2XVQ5              	12.23%		
H2XV74              	11.24%		
H2XRW3              	10.53%		
F6ZT75              	9.67%		
F6T2T0              	9.67%		
Bootstrap support for H2XY63 as seed ortholog is 100%.
Bootstrap support for B5DLM8 as seed ortholog is 94%.

Group of orthologs #3267. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:128

F6W2W8              	100.00%		B5DLS9              	100.00%
                    	       		B5DLK1              	11.63%
Bootstrap support for F6W2W8 as seed ortholog is 100%.
Bootstrap support for B5DLS9 as seed ortholog is 100%.

Group of orthologs #3268. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:128

F6TEV5              	100.00%		Q28ZN2              	100.00%
Bootstrap support for F6TEV5 as seed ortholog is 100%.
Bootstrap support for Q28ZN2 as seed ortholog is 100%.

Group of orthologs #3269. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:128

F6XZJ5              	100.00%		B5E0W2              	100.00%
Bootstrap support for F6XZJ5 as seed ortholog is 100%.
Bootstrap support for B5E0W2 as seed ortholog is 100%.

Group of orthologs #3270. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:128

F6QBF6              	100.00%		Q29JA9              	100.00%
Bootstrap support for F6QBF6 as seed ortholog is 100%.
Bootstrap support for Q29JA9 as seed ortholog is 100%.

Group of orthologs #3271. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:128

H2XXU4              	100.00%		B5DHN1              	100.00%
Bootstrap support for H2XXU4 as seed ortholog is 100%.
Bootstrap support for B5DHN1 as seed ortholog is 100%.

Group of orthologs #3272. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 D.pseudoobscura:4

F6YI50              	100.00%		Q290C1              	100.00%
Bootstrap support for F6YI50 as seed ortholog is 60%.
Alternative seed ortholog is H2Y1C2 (36 bits away from this cluster)
Bootstrap support for Q290C1 as seed ortholog is 46%.
Alternative seed ortholog is B5DJ82 (4 bits away from this cluster)

Group of orthologs #3273. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:128

F7AUH4              	100.00%		Q29AH6              	100.00%
Bootstrap support for F7AUH4 as seed ortholog is 100%.
Bootstrap support for Q29AH6 as seed ortholog is 100%.

Group of orthologs #3274. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:128

F7B819              	100.00%		Q29EQ9              	100.00%
Bootstrap support for F7B819 as seed ortholog is 100%.
Bootstrap support for Q29EQ9 as seed ortholog is 100%.

Group of orthologs #3275. Best score 128 bits
Score difference with first non-orthologous sequence - C.intestinalis:128 D.pseudoobscura:128

F7B4T0              	100.00%		Q2LZQ9              	100.00%
Bootstrap support for F7B4T0 as seed ortholog is 100%.
Bootstrap support for Q2LZQ9 as seed ortholog is 100%.

Group of orthologs #3276. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 D.pseudoobscura:127

F6WJD2              	100.00%		Q29G50              	100.00%
F6V3B4              	13.65%		B5DN53              	12.72%
F7ALJ0              	12.45%		
F6Y070              	10.44%		
F6Y2B5              	8.84%		
Bootstrap support for F6WJD2 as seed ortholog is 100%.
Bootstrap support for Q29G50 as seed ortholog is 100%.

Group of orthologs #3277. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 D.pseudoobscura:127

F6TQ36              	100.00%		Q292K2              	100.00%
F7AGV3              	13.67%		Q292J8              	15.39%
                    	       		Q292J9              	10.19%
Bootstrap support for F6TQ36 as seed ortholog is 100%.
Bootstrap support for Q292K2 as seed ortholog is 100%.

Group of orthologs #3278. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 D.pseudoobscura:127

F6TV26              	100.00%		B5DVB2              	100.00%
                    	       		B5DVA9              	26.63%
Bootstrap support for F6TV26 as seed ortholog is 100%.
Bootstrap support for B5DVB2 as seed ortholog is 100%.

Group of orthologs #3279. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 D.pseudoobscura:127

F6T0B7              	100.00%		I7LTN7              	100.00%
Bootstrap support for F6T0B7 as seed ortholog is 79%.
Bootstrap support for I7LTN7 as seed ortholog is 100%.

Group of orthologs #3280. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 D.pseudoobscura:127

H2XJM4              	100.00%		Q297K1              	100.00%
Bootstrap support for H2XJM4 as seed ortholog is 100%.
Bootstrap support for Q297K1 as seed ortholog is 100%.

Group of orthologs #3281. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:35 D.pseudoobscura:65

H2XMU3              	100.00%		Q29EA2              	100.00%
Bootstrap support for H2XMU3 as seed ortholog is 82%.
Bootstrap support for Q29EA2 as seed ortholog is 97%.

Group of orthologs #3282. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:127 D.pseudoobscura:127

H2XZ02              	100.00%		Q291B4              	100.00%
Bootstrap support for H2XZ02 as seed ortholog is 100%.
Bootstrap support for Q291B4 as seed ortholog is 100%.

Group of orthologs #3283. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 D.pseudoobscura:127

H2XZN8              	100.00%		Q29D10              	100.00%
Bootstrap support for H2XZN8 as seed ortholog is 98%.
Bootstrap support for Q29D10 as seed ortholog is 100%.

Group of orthologs #3284. Best score 127 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 D.pseudoobscura:8

H2Y2P7              	100.00%		Q29I44              	100.00%
Bootstrap support for H2Y2P7 as seed ortholog is 76%.
Bootstrap support for Q29I44 as seed ortholog is 59%.
Alternative seed ortholog is B5DXD4 (8 bits away from this cluster)

Group of orthologs #3285. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 D.pseudoobscura:8

F6TTN6              	100.00%		Q2LZ11              	100.00%
F6XBI2              	100.00%		
F7AY51              	40.06%		
F6T788              	33.64%		
H2XJX9              	12.44%		
H2XN28              	10.70%		
F6TTQ6              	7.65%		
F6SYB3              	5.50%		
Bootstrap support for F6TTN6 as seed ortholog is 63%.
Alternative seed ortholog is H2XRG0 (14 bits away from this cluster)
Bootstrap support for F6XBI2 as seed ortholog is 65%.
Alternative seed ortholog is H2XRG0 (14 bits away from this cluster)
Bootstrap support for Q2LZ11 as seed ortholog is 56%.
Alternative seed ortholog is Q292W4 (8 bits away from this cluster)

Group of orthologs #3286. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 D.pseudoobscura:126

F7B3V5              	100.00%		B5DYD9              	100.00%
H2XPJ1              	100.00%		Q29BK1              	100.00%
F6S5X9              	41.31%		
H2Y356              	29.16%		
F6UVE4              	21.87%		
F6W7J8              	19.11%		
Bootstrap support for F7B3V5 as seed ortholog is 100%.
Bootstrap support for H2XPJ1 as seed ortholog is 100%.
Bootstrap support for B5DYD9 as seed ortholog is 100%.
Bootstrap support for Q29BK1 as seed ortholog is 100%.

Group of orthologs #3287. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:17 D.pseudoobscura:32

H2XNU9              	100.00%		Q29NY0              	100.00%
H2XQ86              	15.96%		Q29K50              	15.91%
                    	       		Q29NX9              	11.83%
Bootstrap support for H2XNU9 as seed ortholog is 71%.
Alternative seed ortholog is H2XZI8 (17 bits away from this cluster)
Bootstrap support for Q29NY0 as seed ortholog is 84%.

Group of orthologs #3288. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 D.pseudoobscura:31

F6TZL5              	100.00%		Q29JV0              	100.00%
                    	       		Q28Y97              	6.13%
Bootstrap support for F6TZL5 as seed ortholog is 71%.
Alternative seed ortholog is H2XRG0 (18 bits away from this cluster)
Bootstrap support for Q29JV0 as seed ortholog is 81%.

Group of orthologs #3289. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 D.pseudoobscura:7

F6WFW0              	100.00%		B5DH81              	100.00%
Bootstrap support for F6WFW0 as seed ortholog is 100%.
Bootstrap support for B5DH81 as seed ortholog is 72%.
Alternative seed ortholog is Q294K5 (7 bits away from this cluster)

Group of orthologs #3290. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 D.pseudoobscura:20

F6RKZ8              	100.00%		Q296T5              	100.00%
Bootstrap support for F6RKZ8 as seed ortholog is 100%.
Bootstrap support for Q296T5 as seed ortholog is 82%.

Group of orthologs #3291. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 D.pseudoobscura:126

F6S809              	100.00%		Q296F3              	100.00%
Bootstrap support for F6S809 as seed ortholog is 100%.
Bootstrap support for Q296F3 as seed ortholog is 100%.

Group of orthologs #3292. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 D.pseudoobscura:126

F6REV8              	100.00%		Q29H87              	100.00%
Bootstrap support for F6REV8 as seed ortholog is 100%.
Bootstrap support for Q29H87 as seed ortholog is 100%.

Group of orthologs #3293. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 D.pseudoobscura:77

F6PKV2              	100.00%		Q2M0M1              	100.00%
Bootstrap support for F6PKV2 as seed ortholog is 69%.
Alternative seed ortholog is F6Y4V4 (10 bits away from this cluster)
Bootstrap support for Q2M0M1 as seed ortholog is 99%.

Group of orthologs #3294. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 D.pseudoobscura:126

F6Z6E4              	100.00%		Q29DW6              	100.00%
Bootstrap support for F6Z6E4 as seed ortholog is 99%.
Bootstrap support for Q29DW6 as seed ortholog is 100%.

Group of orthologs #3295. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 D.pseudoobscura:126

F7BFF4              	100.00%		Q295Y6              	100.00%
Bootstrap support for F7BFF4 as seed ortholog is 100%.
Bootstrap support for Q295Y6 as seed ortholog is 100%.

Group of orthologs #3296. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 D.pseudoobscura:126

H2XST1              	100.00%		I7LE37              	100.00%
Bootstrap support for H2XST1 as seed ortholog is 100%.
Bootstrap support for I7LE37 as seed ortholog is 100%.

Group of orthologs #3297. Best score 126 bits
Score difference with first non-orthologous sequence - C.intestinalis:126 D.pseudoobscura:126

H2XPL7              	100.00%		Q29IV4              	100.00%
Bootstrap support for H2XPL7 as seed ortholog is 100%.
Bootstrap support for Q29IV4 as seed ortholog is 100%.

Group of orthologs #3298. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 D.pseudoobscura:125

F6R0J7              	100.00%		Q29KV7              	100.00%
                    	       		Q29KV6              	54.48%
                    	       		Q29KV4              	27.37%
                    	       		Q29KV9              	22.51%
                    	       		Q29KV5              	15.86%
                    	       		B5DJL4              	13.81%
Bootstrap support for F6R0J7 as seed ortholog is 81%.
Bootstrap support for Q29KV7 as seed ortholog is 100%.

Group of orthologs #3299. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 D.pseudoobscura:125

H2XSN9              	100.00%		Q29IU7              	100.00%
                    	       		Q29IU8              	6.61%
Bootstrap support for H2XSN9 as seed ortholog is 100%.
Bootstrap support for Q29IU7 as seed ortholog is 100%.

Group of orthologs #3300. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 D.pseudoobscura:29

F6SYM5              	100.00%		B5DX84              	100.00%
Bootstrap support for F6SYM5 as seed ortholog is 100%.
Bootstrap support for B5DX84 as seed ortholog is 84%.

Group of orthologs #3301. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 D.pseudoobscura:125

F6WEC1              	100.00%		Q28Y78              	100.00%
Bootstrap support for F6WEC1 as seed ortholog is 100%.
Bootstrap support for Q28Y78 as seed ortholog is 100%.

Group of orthologs #3302. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 D.pseudoobscura:125

F6PRN9              	100.00%		Q29N93              	100.00%
Bootstrap support for F6PRN9 as seed ortholog is 100%.
Bootstrap support for Q29N93 as seed ortholog is 100%.

Group of orthologs #3303. Best score 125 bits
Score difference with first non-orthologous sequence - C.intestinalis:125 D.pseudoobscura:125

F6UG66              	100.00%		Q29MW3              	100.00%
Bootstrap support for F6UG66 as seed ortholog is 100%.
Bootstrap support for Q29MW3 as seed ortholog is 100%.

Group of orthologs #3304. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 D.pseudoobscura:124

H2XXC3              	100.00%		Q292Y9              	100.00%
                    	       		Q292Y8              	34.95%
Bootstrap support for H2XXC3 as seed ortholog is 72%.
Alternative seed ortholog is H2XKL0 (32 bits away from this cluster)
Bootstrap support for Q292Y9 as seed ortholog is 100%.

Group of orthologs #3305. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 D.pseudoobscura:22

F6SJ02              	100.00%		B5DYV5              	100.00%
Bootstrap support for F6SJ02 as seed ortholog is 73%.
Alternative seed ortholog is F7AJY7 (24 bits away from this cluster)
Bootstrap support for B5DYV5 as seed ortholog is 81%.

Group of orthologs #3306. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 D.pseudoobscura:124

F6U3C1              	100.00%		Q29AM1              	100.00%
Bootstrap support for F6U3C1 as seed ortholog is 99%.
Bootstrap support for Q29AM1 as seed ortholog is 100%.

Group of orthologs #3307. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 D.pseudoobscura:124

F6Q599              	100.00%		Q29KF9              	100.00%
Bootstrap support for F6Q599 as seed ortholog is 100%.
Bootstrap support for Q29KF9 as seed ortholog is 100%.

Group of orthologs #3308. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 D.pseudoobscura:124

F6QIE7              	100.00%		Q29L92              	100.00%
Bootstrap support for F6QIE7 as seed ortholog is 60%.
Alternative seed ortholog is F6V386 (9 bits away from this cluster)
Bootstrap support for Q29L92 as seed ortholog is 100%.

Group of orthologs #3309. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 D.pseudoobscura:124

F6WIH5              	100.00%		Q29G72              	100.00%
Bootstrap support for F6WIH5 as seed ortholog is 100%.
Bootstrap support for Q29G72 as seed ortholog is 100%.

Group of orthologs #3310. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 D.pseudoobscura:124

H2XLP5              	100.00%		Q28WZ6              	100.00%
Bootstrap support for H2XLP5 as seed ortholog is 100%.
Bootstrap support for Q28WZ6 as seed ortholog is 100%.

Group of orthologs #3311. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 D.pseudoobscura:65

F7B349              	100.00%		Q293R8              	100.00%
Bootstrap support for F7B349 as seed ortholog is 100%.
Bootstrap support for Q293R8 as seed ortholog is 99%.

Group of orthologs #3312. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 D.pseudoobscura:124

F7A2I6              	100.00%		Q29NZ8              	100.00%
Bootstrap support for F7A2I6 as seed ortholog is 100%.
Bootstrap support for Q29NZ8 as seed ortholog is 100%.

Group of orthologs #3313. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 D.pseudoobscura:124

H2XN33              	100.00%		Q29LA8              	100.00%
Bootstrap support for H2XN33 as seed ortholog is 100%.
Bootstrap support for Q29LA8 as seed ortholog is 100%.

Group of orthologs #3314. Best score 124 bits
Score difference with first non-orthologous sequence - C.intestinalis:124 D.pseudoobscura:124

Q4H376              	100.00%		Q29DH7              	100.00%
Bootstrap support for Q4H376 as seed ortholog is 100%.
Bootstrap support for Q29DH7 as seed ortholog is 100%.

Group of orthologs #3315. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 D.pseudoobscura:74

H2XN59              	100.00%		B5DII3              	100.00%
H2Y0V5              	73.31%		
F6TC09              	20.59%		
F6W505              	19.60%		
H2Y248              	19.11%		
F6Q7J8              	18.78%		
F6RPT1              	18.78%		
H2XVV6              	16.97%		
F6WMW7              	16.14%		
H2Y011              	15.32%		
F6RQ77              	14.00%		
F7BB18              	12.85%		
F6T435              	12.03%		
F6UH52              	11.86%		
H2XZA1              	11.53%		
H2XM68              	11.04%		
F6Q1R5              	9.88%		
F6W5Z3              	9.88%		
F6XQY6              	9.72%		
F6QWZ9              	9.23%		
Q86NA9              	8.90%		
F6U9D6              	8.90%		
F7A8W7              	8.73%		
F6UDE2              	8.40%		
F6TN66              	7.91%		
F6QWY0              	7.74%		
Q6A1F0              	7.25%		
F6SB61              	6.59%		
F6XEI7              	6.59%		
Bootstrap support for H2XN59 as seed ortholog is 100%.
Bootstrap support for B5DII3 as seed ortholog is 96%.

Group of orthologs #3316. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 D.pseudoobscura:123

F6TZN8              	100.00%		B5DM18              	100.00%
Bootstrap support for F6TZN8 as seed ortholog is 100%.
Bootstrap support for B5DM18 as seed ortholog is 100%.

Group of orthologs #3317. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 D.pseudoobscura:123

F6Y7W5              	100.00%		B5DH68              	100.00%
Bootstrap support for F6Y7W5 as seed ortholog is 100%.
Bootstrap support for B5DH68 as seed ortholog is 100%.

Group of orthologs #3318. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 D.pseudoobscura:123

F6WZU2              	100.00%		Q298E1              	100.00%
Bootstrap support for F6WZU2 as seed ortholog is 100%.
Bootstrap support for Q298E1 as seed ortholog is 100%.

Group of orthologs #3319. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:45

F6W4Z8              	100.00%		Q29C71              	100.00%
Bootstrap support for F6W4Z8 as seed ortholog is 99%.
Bootstrap support for Q29C71 as seed ortholog is 95%.

Group of orthologs #3320. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 D.pseudoobscura:123

F6XRM1              	100.00%		Q29JJ5              	100.00%
Bootstrap support for F6XRM1 as seed ortholog is 100%.
Bootstrap support for Q29JJ5 as seed ortholog is 100%.

Group of orthologs #3321. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 D.pseudoobscura:123

H2XW62              	100.00%		Q29MY0              	100.00%
Bootstrap support for H2XW62 as seed ortholog is 100%.
Bootstrap support for Q29MY0 as seed ortholog is 100%.

Group of orthologs #3322. Best score 123 bits
Score difference with first non-orthologous sequence - C.intestinalis:123 D.pseudoobscura:64

Q8I7D9              	100.00%		Q29IU5              	100.00%
Bootstrap support for Q8I7D9 as seed ortholog is 100%.
Bootstrap support for Q29IU5 as seed ortholog is 100%.

Group of orthologs #3323. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:40 D.pseudoobscura:122

F7A7X6              	100.00%		Q290I4              	100.00%
                    	       		B5DRP8              	6.52%
Bootstrap support for F7A7X6 as seed ortholog is 99%.
Bootstrap support for Q290I4 as seed ortholog is 100%.

Group of orthologs #3324. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 D.pseudoobscura:7

F6YLR6              	100.00%		Q29MK2              	100.00%
                    	       		Q29MJ8              	8.82%
Bootstrap support for F6YLR6 as seed ortholog is 84%.
Bootstrap support for Q29MK2 as seed ortholog is 59%.
Alternative seed ortholog is Q296T0 (7 bits away from this cluster)

Group of orthologs #3325. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 D.pseudoobscura:122

F6RGQ1              	100.00%		Q29DZ3              	100.00%
Bootstrap support for F6RGQ1 as seed ortholog is 100%.
Bootstrap support for Q29DZ3 as seed ortholog is 100%.

Group of orthologs #3326. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 D.pseudoobscura:122

F6XR53              	100.00%		Q293Y0              	100.00%
Bootstrap support for F6XR53 as seed ortholog is 100%.
Bootstrap support for Q293Y0 as seed ortholog is 100%.

Group of orthologs #3327. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 D.pseudoobscura:122

F6U930              	100.00%		Q2LYX3              	100.00%
Bootstrap support for F6U930 as seed ortholog is 100%.
Bootstrap support for Q2LYX3 as seed ortholog is 100%.

Group of orthologs #3328. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 D.pseudoobscura:122

H2XT41              	100.00%		Q28Z07              	100.00%
Bootstrap support for H2XT41 as seed ortholog is 100%.
Bootstrap support for Q28Z07 as seed ortholog is 100%.

Group of orthologs #3329. Best score 122 bits
Score difference with first non-orthologous sequence - C.intestinalis:122 D.pseudoobscura:122

F7BD80              	100.00%		Q29P86              	100.00%
Bootstrap support for F7BD80 as seed ortholog is 100%.
Bootstrap support for Q29P86 as seed ortholog is 100%.

Group of orthologs #3330. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 D.pseudoobscura:121

H2Y252              	100.00%		Q29CF8              	100.00%
L7N0U7              	12.16%		B5E1J1              	9.11%
F6X245              	9.85%		Q28YL9              	6.51%
F6X329              	9.22%		
F7BDB7              	7.34%		
Bootstrap support for H2Y252 as seed ortholog is 65%.
Alternative seed ortholog is F6ZNS9 (16 bits away from this cluster)
Bootstrap support for Q29CF8 as seed ortholog is 100%.

Group of orthologs #3331. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:34

H2XUT9              	100.00%		B5DNA5              	100.00%
                    	       		B5DNA6              	95.71%
                    	       		B5DIA9              	91.43%
                    	       		B5DNA7              	87.14%
                    	       		B5DJC8              	18.57%
Bootstrap support for H2XUT9 as seed ortholog is 100%.
Bootstrap support for B5DNA5 as seed ortholog is 98%.

Group of orthologs #3332. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:121

H2XPZ0              	100.00%		Q29ML9              	100.00%
F7B963              	8.25%		Q29MM0              	12.63%
F6PI53              	6.70%		
Bootstrap support for H2XPZ0 as seed ortholog is 100%.
Bootstrap support for Q29ML9 as seed ortholog is 100%.

Group of orthologs #3333. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:121

F6UBS1              	100.00%		B5DVH6              	100.00%
H2XP87              	46.95%		
F6Y844              	29.95%		
Bootstrap support for F6UBS1 as seed ortholog is 100%.
Bootstrap support for B5DVH6 as seed ortholog is 100%.

Group of orthologs #3334. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:121

F6SRD6              	100.00%		B5DMA5              	100.00%
                    	       		B5DP69              	34.87%
Bootstrap support for F6SRD6 as seed ortholog is 100%.
Bootstrap support for B5DMA5 as seed ortholog is 100%.

Group of orthologs #3335. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 D.pseudoobscura:121

F6Y3J4              	100.00%		B5E021              	100.00%
                    	       		Q291I9              	16.81%
Bootstrap support for F6Y3J4 as seed ortholog is 87%.
Bootstrap support for B5E021 as seed ortholog is 100%.

Group of orthologs #3336. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:121

F6PU23              	100.00%		B5E0Y1              	100.00%
Bootstrap support for F6PU23 as seed ortholog is 100%.
Bootstrap support for B5E0Y1 as seed ortholog is 100%.

Group of orthologs #3337. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:121

F6WNH2              	100.00%		Q28Z98              	100.00%
Bootstrap support for F6WNH2 as seed ortholog is 100%.
Bootstrap support for Q28Z98 as seed ortholog is 100%.

Group of orthologs #3338. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:121

F6V9P3              	100.00%		Q29C85              	100.00%
Bootstrap support for F6V9P3 as seed ortholog is 100%.
Bootstrap support for Q29C85 as seed ortholog is 100%.

Group of orthologs #3339. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:121

F6YUZ1              	100.00%		Q295U3              	100.00%
Bootstrap support for F6YUZ1 as seed ortholog is 100%.
Bootstrap support for Q295U3 as seed ortholog is 100%.

Group of orthologs #3340. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:121

F6TJY9              	100.00%		Q29KF5              	100.00%
Bootstrap support for F6TJY9 as seed ortholog is 100%.
Bootstrap support for Q29KF5 as seed ortholog is 100%.

Group of orthologs #3341. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:121

H2XJZ7              	100.00%		Q29AC0              	100.00%
Bootstrap support for H2XJZ7 as seed ortholog is 100%.
Bootstrap support for Q29AC0 as seed ortholog is 100%.

Group of orthologs #3342. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:52

F7B9G3              	100.00%		Q29CV0              	100.00%
Bootstrap support for F7B9G3 as seed ortholog is 100%.
Bootstrap support for Q29CV0 as seed ortholog is 71%.
Alternative seed ortholog is Q29CT1 (52 bits away from this cluster)

Group of orthologs #3343. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:121

H2XVU3              	100.00%		Q28ZX2              	100.00%
Bootstrap support for H2XVU3 as seed ortholog is 100%.
Bootstrap support for Q28ZX2 as seed ortholog is 100%.

Group of orthologs #3344. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:121

H2Y315              	100.00%		Q291P7              	100.00%
Bootstrap support for H2Y315 as seed ortholog is 100%.
Bootstrap support for Q291P7 as seed ortholog is 100%.

Group of orthologs #3345. Best score 121 bits
Score difference with first non-orthologous sequence - C.intestinalis:121 D.pseudoobscura:121

H2Y1A3              	100.00%		Q29CK2              	100.00%
Bootstrap support for H2Y1A3 as seed ortholog is 100%.
Bootstrap support for Q29CK2 as seed ortholog is 100%.

Group of orthologs #3346. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 D.pseudoobscura:43

H2XPQ4              	100.00%		B5DYW9              	100.00%
F6QMA7              	15.97%		B5DYX0              	54.21%
Bootstrap support for H2XPQ4 as seed ortholog is 100%.
Bootstrap support for B5DYW9 as seed ortholog is 99%.

Group of orthologs #3347. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 D.pseudoobscura:54

F6RJQ4              	100.00%		Q28XJ4              	100.00%
                    	       		Q29JZ1              	7.36%
Bootstrap support for F6RJQ4 as seed ortholog is 100%.
Bootstrap support for Q28XJ4 as seed ortholog is 92%.

Group of orthologs #3348. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 D.pseudoobscura:120

F6ZKV3              	100.00%		Q28Z82              	100.00%
                    	       		Q28XE4              	9.12%
Bootstrap support for F6ZKV3 as seed ortholog is 100%.
Bootstrap support for Q28Z82 as seed ortholog is 100%.

Group of orthologs #3349. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 D.pseudoobscura:120

F6QFA2              	100.00%		Q29JM0              	100.00%
Bootstrap support for F6QFA2 as seed ortholog is 100%.
Bootstrap support for Q29JM0 as seed ortholog is 100%.

Group of orthologs #3350. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 D.pseudoobscura:120

F6XKH4              	100.00%		Q299E5              	100.00%
Bootstrap support for F6XKH4 as seed ortholog is 100%.
Bootstrap support for Q299E5 as seed ortholog is 100%.

Group of orthologs #3351. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 D.pseudoobscura:120

F7A7M7              	100.00%		Q29LI8              	100.00%
Bootstrap support for F7A7M7 as seed ortholog is 100%.
Bootstrap support for Q29LI8 as seed ortholog is 100%.

Group of orthologs #3352. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 D.pseudoobscura:120

H2XK95              	100.00%		Q29NW0              	100.00%
Bootstrap support for H2XK95 as seed ortholog is 100%.
Bootstrap support for Q29NW0 as seed ortholog is 100%.

Group of orthologs #3353. Best score 120 bits
Score difference with first non-orthologous sequence - C.intestinalis:120 D.pseudoobscura:120

H2XVJ4              	100.00%		Q29I73              	100.00%
Bootstrap support for H2XVJ4 as seed ortholog is 100%.
Bootstrap support for Q29I73 as seed ortholog is 100%.

Group of orthologs #3354. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:1 D.pseudoobscura:10

Q1RPZ1              	100.00%		Q294E4              	100.00%
                    	       		Q294E3              	22.11%
                    	       		Q294E1              	12.94%
                    	       		Q294E2              	9.82%
                    	       		Q29I90              	6.69%
                    	       		Q296L5              	6.15%
                    	       		Q294K1              	5.07%
                    	       		B5DHV6              	5.07%
Bootstrap support for Q1RPZ1 as seed ortholog is 59%.
Alternative seed ortholog is Q1RQ09 (1 bits away from this cluster)
Bootstrap support for Q294E4 as seed ortholog is 56%.
Alternative seed ortholog is Q291K7 (10 bits away from this cluster)

Group of orthologs #3355. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 D.pseudoobscura:119

F6UPP6              	100.00%		B5DVV6              	100.00%
                    	       		B5DP00              	92.99%
Bootstrap support for F6UPP6 as seed ortholog is 100%.
Bootstrap support for B5DVV6 as seed ortholog is 100%.

Group of orthologs #3356. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 D.pseudoobscura:22

F6WA11              	100.00%		Q29A27              	100.00%
F6WKI5              	23.48%		
Bootstrap support for F6WA11 as seed ortholog is 100%.
Bootstrap support for Q29A27 as seed ortholog is 75%.

Group of orthologs #3357. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 D.pseudoobscura:119

F6RRL3              	100.00%		B5DS37              	100.00%
Bootstrap support for F6RRL3 as seed ortholog is 100%.
Bootstrap support for B5DS37 as seed ortholog is 100%.

Group of orthologs #3358. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 D.pseudoobscura:119

F6V542              	100.00%		Q294V8              	100.00%
Bootstrap support for F6V542 as seed ortholog is 100%.
Bootstrap support for Q294V8 as seed ortholog is 100%.

Group of orthologs #3359. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 D.pseudoobscura:119

F7AND3              	100.00%		Q28YC6              	100.00%
Bootstrap support for F7AND3 as seed ortholog is 100%.
Bootstrap support for Q28YC6 as seed ortholog is 100%.

Group of orthologs #3360. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 D.pseudoobscura:119

H2XS95              	100.00%		Q28WQ6              	100.00%
Bootstrap support for H2XS95 as seed ortholog is 100%.
Bootstrap support for Q28WQ6 as seed ortholog is 100%.

Group of orthologs #3361. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 D.pseudoobscura:119

F6XZL0              	100.00%		Q29J58              	100.00%
Bootstrap support for F6XZL0 as seed ortholog is 100%.
Bootstrap support for Q29J58 as seed ortholog is 100%.

Group of orthologs #3362. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 D.pseudoobscura:25

H2XJN2              	100.00%		Q29AC3              	100.00%
Bootstrap support for H2XJN2 as seed ortholog is 97%.
Bootstrap support for Q29AC3 as seed ortholog is 81%.

Group of orthologs #3363. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:119 D.pseudoobscura:17

Q4H303              	100.00%		Q28ZR5              	100.00%
Bootstrap support for Q4H303 as seed ortholog is 100%.
Bootstrap support for Q28ZR5 as seed ortholog is 74%.
Alternative seed ortholog is Q28Z88 (17 bits away from this cluster)

Group of orthologs #3364. Best score 119 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 D.pseudoobscura:46

Q4H2N7              	100.00%		Q29AZ8              	100.00%
Bootstrap support for Q4H2N7 as seed ortholog is 64%.
Alternative seed ortholog is Q4H342 (28 bits away from this cluster)
Bootstrap support for Q29AZ8 as seed ortholog is 98%.

Group of orthologs #3365. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 D.pseudoobscura:118

H2XZV0              	100.00%		B5DLF0              	100.00%
                    	       		B5DK06              	65.91%
                    	       		B5DHQ4              	63.64%
                    	       		B5DJI0              	56.25%
                    	       		B5DJ50              	42.61%
Bootstrap support for H2XZV0 as seed ortholog is 100%.
Bootstrap support for B5DLF0 as seed ortholog is 100%.

Group of orthologs #3366. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 D.pseudoobscura:118

F6ZIL3              	100.00%		B5DT64              	100.00%
H2XVB8              	31.27%		
Bootstrap support for F6ZIL3 as seed ortholog is 100%.
Bootstrap support for B5DT64 as seed ortholog is 100%.

Group of orthologs #3367. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 D.pseudoobscura:118

F6T052              	100.00%		B5DVV7              	100.00%
Bootstrap support for F6T052 as seed ortholog is 100%.
Bootstrap support for B5DVV7 as seed ortholog is 100%.

Group of orthologs #3368. Best score 118 bits
Score difference with first non-orthologous sequence - C.intestinalis:118 D.pseudoobscura:118

F6T6Y7              	100.00%		Q29BK9              	100.00%
Bootstrap support for F6T6Y7 as seed ortholog is 100%.
Bootstrap support for Q29BK9 as seed ortholog is 100%.

Group of orthologs #3369. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 D.pseudoobscura:117

F6SKW2              	100.00%		Q292A6              	100.00%
Bootstrap support for F6SKW2 as seed ortholog is 100%.
Bootstrap support for Q292A6 as seed ortholog is 100%.

Group of orthologs #3370. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 D.pseudoobscura:117

F6PIA8              	100.00%		Q29EF0              	100.00%
Bootstrap support for F6PIA8 as seed ortholog is 100%.
Bootstrap support for Q29EF0 as seed ortholog is 100%.

Group of orthologs #3371. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 D.pseudoobscura:117

F6URT4              	100.00%		Q29A64              	100.00%
Bootstrap support for F6URT4 as seed ortholog is 100%.
Bootstrap support for Q29A64 as seed ortholog is 100%.

Group of orthologs #3372. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 D.pseudoobscura:63

F6ZF76              	100.00%		Q298E6              	100.00%
Bootstrap support for F6ZF76 as seed ortholog is 100%.
Bootstrap support for Q298E6 as seed ortholog is 99%.

Group of orthologs #3373. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 D.pseudoobscura:117

F6Y0T9              	100.00%		Q29DH2              	100.00%
Bootstrap support for F6Y0T9 as seed ortholog is 100%.
Bootstrap support for Q29DH2 as seed ortholog is 100%.

Group of orthologs #3374. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 D.pseudoobscura:117

H2XJJ6              	100.00%		Q291C9              	100.00%
Bootstrap support for H2XJJ6 as seed ortholog is 100%.
Bootstrap support for Q291C9 as seed ortholog is 100%.

Group of orthologs #3375. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 D.pseudoobscura:117

H2XYU8              	100.00%		B5DY07              	100.00%
Bootstrap support for H2XYU8 as seed ortholog is 100%.
Bootstrap support for B5DY07 as seed ortholog is 100%.

Group of orthologs #3376. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 D.pseudoobscura:39

H2Y3S8              	100.00%		B5DUN7              	100.00%
Bootstrap support for H2Y3S8 as seed ortholog is 92%.
Bootstrap support for B5DUN7 as seed ortholog is 83%.

Group of orthologs #3377. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 D.pseudoobscura:117

H2XW11              	100.00%		Q29BU8              	100.00%
Bootstrap support for H2XW11 as seed ortholog is 68%.
Alternative seed ortholog is H2XTR6 (16 bits away from this cluster)
Bootstrap support for Q29BU8 as seed ortholog is 100%.

Group of orthologs #3378. Best score 117 bits
Score difference with first non-orthologous sequence - C.intestinalis:117 D.pseudoobscura:117

H2XKX7              	100.00%		Q2LYT9              	100.00%
Bootstrap support for H2XKX7 as seed ortholog is 100%.
Bootstrap support for Q2LYT9 as seed ortholog is 100%.

Group of orthologs #3379. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 D.pseudoobscura:45

F7B1J5              	100.00%		Q2LZK6              	100.00%
                    	       		Q2LZ92              	21.75%
Bootstrap support for F7B1J5 as seed ortholog is 81%.
Bootstrap support for Q2LZK6 as seed ortholog is 84%.

Group of orthologs #3380. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 D.pseudoobscura:116

H2XYD5              	100.00%		Q29M90              	100.00%
                    	       		B5DV52              	94.55%
Bootstrap support for H2XYD5 as seed ortholog is 100%.
Bootstrap support for Q29M90 as seed ortholog is 100%.

Group of orthologs #3381. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 D.pseudoobscura:116

F6PL73              	100.00%		Q29AT0              	100.00%
Bootstrap support for F6PL73 as seed ortholog is 100%.
Bootstrap support for Q29AT0 as seed ortholog is 100%.

Group of orthologs #3382. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:32 D.pseudoobscura:116

F6WG20              	100.00%		Q295A3              	100.00%
Bootstrap support for F6WG20 as seed ortholog is 80%.
Bootstrap support for Q295A3 as seed ortholog is 100%.

Group of orthologs #3383. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 D.pseudoobscura:39

H2XLQ3              	100.00%		B5DUR5              	100.00%
Bootstrap support for H2XLQ3 as seed ortholog is 97%.
Bootstrap support for B5DUR5 as seed ortholog is 91%.

Group of orthologs #3384. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 D.pseudoobscura:116

F6PM95              	100.00%		Q2M0R8              	100.00%
Bootstrap support for F6PM95 as seed ortholog is 100%.
Bootstrap support for Q2M0R8 as seed ortholog is 100%.

Group of orthologs #3385. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 D.pseudoobscura:116

F6U6R8              	100.00%		Q29M75              	100.00%
Bootstrap support for F6U6R8 as seed ortholog is 100%.
Bootstrap support for Q29M75 as seed ortholog is 100%.

Group of orthologs #3386. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 D.pseudoobscura:116

F6X1Z3              	100.00%		Q29HR7              	100.00%
Bootstrap support for F6X1Z3 as seed ortholog is 98%.
Bootstrap support for Q29HR7 as seed ortholog is 100%.

Group of orthologs #3387. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 D.pseudoobscura:116

F6YWH4              	100.00%		Q29E06              	100.00%
Bootstrap support for F6YWH4 as seed ortholog is 100%.
Bootstrap support for Q29E06 as seed ortholog is 100%.

Group of orthologs #3388. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 D.pseudoobscura:116

F6UKG9              	100.00%		Q2M162              	100.00%
Bootstrap support for F6UKG9 as seed ortholog is 100%.
Bootstrap support for Q2M162 as seed ortholog is 100%.

Group of orthologs #3389. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 D.pseudoobscura:116

F6Z0W4              	100.00%		Q29KY1              	100.00%
Bootstrap support for F6Z0W4 as seed ortholog is 100%.
Bootstrap support for Q29KY1 as seed ortholog is 100%.

Group of orthologs #3390. Best score 116 bits
Score difference with first non-orthologous sequence - C.intestinalis:116 D.pseudoobscura:116

H2Y026              	100.00%		Q2LYQ4              	100.00%
Bootstrap support for H2Y026 as seed ortholog is 100%.
Bootstrap support for Q2LYQ4 as seed ortholog is 100%.

Group of orthologs #3391. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 D.pseudoobscura:115

F6YZ62              	100.00%		Q28YI9              	100.00%
F6UEA0              	27.99%		
F6Z103              	18.35%		
Bootstrap support for F6YZ62 as seed ortholog is 100%.
Bootstrap support for Q28YI9 as seed ortholog is 100%.

Group of orthologs #3392. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:0 D.pseudoobscura:34

F6YS37              	100.00%		Q290X6              	100.00%
Bootstrap support for F6YS37 as seed ortholog is 55%.
Alternative seed ortholog is H2Y145 (0 bits away from this cluster)
Bootstrap support for Q290X6 as seed ortholog is 83%.

Group of orthologs #3393. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 D.pseudoobscura:115

F6YHE2              	100.00%		Q29I62              	100.00%
Bootstrap support for F6YHE2 as seed ortholog is 99%.
Bootstrap support for Q29I62 as seed ortholog is 100%.

Group of orthologs #3394. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 D.pseudoobscura:115

F7BHN2              	100.00%		Q299I3              	100.00%
Bootstrap support for F7BHN2 as seed ortholog is 100%.
Bootstrap support for Q299I3 as seed ortholog is 100%.

Group of orthologs #3395. Best score 115 bits
Score difference with first non-orthologous sequence - C.intestinalis:115 D.pseudoobscura:115

H2Y371              	100.00%		Q28X22              	100.00%
Bootstrap support for H2Y371 as seed ortholog is 100%.
Bootstrap support for Q28X22 as seed ortholog is 100%.

Group of orthologs #3396. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 D.pseudoobscura:114

F6QSH0              	100.00%		B5DUT4              	100.00%
                    	       		B5DUT3              	84.22%
                    	       		B5DUT2              	83.25%
                    	       		Q29KK3              	80.78%
                    	       		B5DLZ1              	56.62%
                    	       		B5DJS0              	53.63%
Bootstrap support for F6QSH0 as seed ortholog is 100%.
Bootstrap support for B5DUT4 as seed ortholog is 100%.

Group of orthologs #3397. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 D.pseudoobscura:114

F6RS75              	100.00%		Q299S0              	100.00%
                    	       		B5DJA4              	7.95%
                    	       		Q29KN2              	7.12%
Bootstrap support for F6RS75 as seed ortholog is 100%.
Bootstrap support for Q299S0 as seed ortholog is 100%.

Group of orthologs #3398. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 D.pseudoobscura:114

F7BAU4              	100.00%		B5DRB4              	100.00%
                    	       		Q29H91              	6.41%
                    	       		Q28XW2              	5.26%
Bootstrap support for F7BAU4 as seed ortholog is 100%.
Bootstrap support for B5DRB4 as seed ortholog is 100%.

Group of orthologs #3399. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 D.pseudoobscura:114

F7ARN8              	100.00%		B5DZ31              	100.00%
                    	       		B5E0U2              	45.37%
Bootstrap support for F7ARN8 as seed ortholog is 100%.
Bootstrap support for B5DZ31 as seed ortholog is 100%.

Group of orthologs #3400. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 D.pseudoobscura:58

F6TKD8              	100.00%		Q29LN3              	100.00%
H2XMP3              	18.78%		
Bootstrap support for F6TKD8 as seed ortholog is 100%.
Bootstrap support for Q29LN3 as seed ortholog is 98%.

Group of orthologs #3401. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:13 D.pseudoobscura:20

F6YXQ0              	100.00%		Q29NA8              	100.00%
                    	       		Q29J34              	13.00%
Bootstrap support for F6YXQ0 as seed ortholog is 74%.
Alternative seed ortholog is H2XXT0 (13 bits away from this cluster)
Bootstrap support for Q29NA8 as seed ortholog is 89%.

Group of orthologs #3402. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 D.pseudoobscura:27

F6RRK4              	100.00%		Q28ZF4              	100.00%
Bootstrap support for F6RRK4 as seed ortholog is 100%.
Bootstrap support for Q28ZF4 as seed ortholog is 86%.

Group of orthologs #3403. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 D.pseudoobscura:114

C4B8X2              	100.00%		Q29H88              	100.00%
Bootstrap support for C4B8X2 as seed ortholog is 100%.
Bootstrap support for Q29H88 as seed ortholog is 100%.

Group of orthologs #3404. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 D.pseudoobscura:114

F6RXS5              	100.00%		Q29GB0              	100.00%
Bootstrap support for F6RXS5 as seed ortholog is 100%.
Bootstrap support for Q29GB0 as seed ortholog is 100%.

Group of orthologs #3405. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 D.pseudoobscura:114

F6RS06              	100.00%		Q29JM6              	100.00%
Bootstrap support for F6RS06 as seed ortholog is 100%.
Bootstrap support for Q29JM6 as seed ortholog is 100%.

Group of orthologs #3406. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 D.pseudoobscura:41

F7AIB9              	100.00%		Q28Z43              	100.00%
Bootstrap support for F7AIB9 as seed ortholog is 100%.
Bootstrap support for Q28Z43 as seed ortholog is 89%.

Group of orthologs #3407. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 D.pseudoobscura:53

F6YAS9              	100.00%		Q2M124              	100.00%
Bootstrap support for F6YAS9 as seed ortholog is 77%.
Bootstrap support for Q2M124 as seed ortholog is 92%.

Group of orthologs #3408. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 D.pseudoobscura:114

F6ZGE9              	100.00%		Q2LZX1              	100.00%
Bootstrap support for F6ZGE9 as seed ortholog is 100%.
Bootstrap support for Q2LZX1 as seed ortholog is 100%.

Group of orthologs #3409. Best score 114 bits
Score difference with first non-orthologous sequence - C.intestinalis:114 D.pseudoobscura:114

H2Y152              	100.00%		Q29GQ8              	100.00%
Bootstrap support for H2Y152 as seed ortholog is 100%.
Bootstrap support for Q29GQ8 as seed ortholog is 100%.

Group of orthologs #3410. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:113

F6YNK9              	100.00%		Q29C63              	100.00%
                    	       		B5DYT4              	39.61%
Bootstrap support for F6YNK9 as seed ortholog is 100%.
Bootstrap support for Q29C63 as seed ortholog is 100%.

Group of orthologs #3411. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:113

F6WC79              	100.00%		B5DXR6              	100.00%
Bootstrap support for F6WC79 as seed ortholog is 100%.
Bootstrap support for B5DXR6 as seed ortholog is 100%.

Group of orthologs #3412. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:113

F6WS92              	100.00%		Q28ZP5              	100.00%
Bootstrap support for F6WS92 as seed ortholog is 100%.
Bootstrap support for Q28ZP5 as seed ortholog is 100%.

Group of orthologs #3413. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:113

F6UE50              	100.00%		Q29CQ0              	100.00%
Bootstrap support for F6UE50 as seed ortholog is 100%.
Bootstrap support for Q29CQ0 as seed ortholog is 100%.

Group of orthologs #3414. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:113

F6QES8              	100.00%		Q29LZ3              	100.00%
Bootstrap support for F6QES8 as seed ortholog is 100%.
Bootstrap support for Q29LZ3 as seed ortholog is 100%.

Group of orthologs #3415. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 D.pseudoobscura:113

F7A765              	100.00%		I7LSU9              	100.00%
Bootstrap support for F7A765 as seed ortholog is 93%.
Bootstrap support for I7LSU9 as seed ortholog is 100%.

Group of orthologs #3416. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:113

F7ADC2              	100.00%		Q291V4              	100.00%
Bootstrap support for F7ADC2 as seed ortholog is 100%.
Bootstrap support for Q291V4 as seed ortholog is 100%.

Group of orthologs #3417. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:113

F6SEM6              	100.00%		Q2LYX9              	100.00%
Bootstrap support for F6SEM6 as seed ortholog is 100%.
Bootstrap support for Q2LYX9 as seed ortholog is 100%.

Group of orthologs #3418. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:113

F6UXP7              	100.00%		Q29MN7              	100.00%
Bootstrap support for F6UXP7 as seed ortholog is 100%.
Bootstrap support for Q29MN7 as seed ortholog is 100%.

Group of orthologs #3419. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 D.pseudoobscura:25

F6ZW63              	100.00%		Q29EP8              	100.00%
Bootstrap support for F6ZW63 as seed ortholog is 77%.
Bootstrap support for Q29EP8 as seed ortholog is 56%.
Alternative seed ortholog is B5DQR7 (25 bits away from this cluster)

Group of orthologs #3420. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:113

H2XKP6              	100.00%		Q29D01              	100.00%
Bootstrap support for H2XKP6 as seed ortholog is 100%.
Bootstrap support for Q29D01 as seed ortholog is 100%.

Group of orthologs #3421. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:59

H2Y2X6              	100.00%		Q297E5              	100.00%
Bootstrap support for H2Y2X6 as seed ortholog is 100%.
Bootstrap support for Q297E5 as seed ortholog is 99%.

Group of orthologs #3422. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:113

H2Y133              	100.00%		Q29HL7              	100.00%
Bootstrap support for H2Y133 as seed ortholog is 100%.
Bootstrap support for Q29HL7 as seed ortholog is 100%.

Group of orthologs #3423. Best score 113 bits
Score difference with first non-orthologous sequence - C.intestinalis:113 D.pseudoobscura:113

H2Y1C3              	100.00%		Q29NY3              	100.00%
Bootstrap support for H2Y1C3 as seed ortholog is 100%.
Bootstrap support for Q29NY3 as seed ortholog is 100%.

Group of orthologs #3424. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 D.pseudoobscura:21

F6ZBX3              	100.00%		Q29KI7              	100.00%
                    	       		Q294V2              	5.65%
                    	       		Q29D77              	5.49%
Bootstrap support for F6ZBX3 as seed ortholog is 100%.
Bootstrap support for Q29KI7 as seed ortholog is 69%.
Alternative seed ortholog is Q29EK0 (21 bits away from this cluster)

Group of orthologs #3425. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 D.pseudoobscura:112

F6SRF9              	100.00%		B5DLR0              	100.00%
F6RKY2              	5.08%		
Bootstrap support for F6SRF9 as seed ortholog is 100%.
Bootstrap support for B5DLR0 as seed ortholog is 100%.

Group of orthologs #3426. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 D.pseudoobscura:112

F6PQ66              	100.00%		Q29AF8              	100.00%
F6VYY7              	7.96%		
Bootstrap support for F6PQ66 as seed ortholog is 100%.
Bootstrap support for Q29AF8 as seed ortholog is 100%.

Group of orthologs #3427. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 D.pseudoobscura:112

F6T3G6              	100.00%		Q29FK9              	100.00%
F6WG12              	43.14%		
Bootstrap support for F6T3G6 as seed ortholog is 100%.
Bootstrap support for Q29FK9 as seed ortholog is 100%.

Group of orthologs #3428. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 D.pseudoobscura:112

F6WVC9              	100.00%		Q295J3              	100.00%
Bootstrap support for F6WVC9 as seed ortholog is 100%.
Bootstrap support for Q295J3 as seed ortholog is 100%.

Group of orthologs #3429. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 D.pseudoobscura:112

F6S202              	100.00%		Q2LYY2              	100.00%
Bootstrap support for F6S202 as seed ortholog is 100%.
Bootstrap support for Q2LYY2 as seed ortholog is 100%.

Group of orthologs #3430. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 D.pseudoobscura:112

H2XRA6              	100.00%		Q29CL8              	100.00%
Bootstrap support for H2XRA6 as seed ortholog is 95%.
Bootstrap support for Q29CL8 as seed ortholog is 100%.

Group of orthologs #3431. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 D.pseudoobscura:112

H2XZW2              	100.00%		Q292C1              	100.00%
Bootstrap support for H2XZW2 as seed ortholog is 100%.
Bootstrap support for Q292C1 as seed ortholog is 100%.

Group of orthologs #3432. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 D.pseudoobscura:112

Q4H3A1              	100.00%		Q28ZD6              	100.00%
Bootstrap support for Q4H3A1 as seed ortholog is 100%.
Bootstrap support for Q28ZD6 as seed ortholog is 100%.

Group of orthologs #3433. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 D.pseudoobscura:16

H2Y0G2              	100.00%		Q299D4              	100.00%
Bootstrap support for H2Y0G2 as seed ortholog is 77%.
Bootstrap support for Q299D4 as seed ortholog is 75%.

Group of orthologs #3434. Best score 112 bits
Score difference with first non-orthologous sequence - C.intestinalis:112 D.pseudoobscura:112

H2Y2F7              	100.00%		Q29EH5              	100.00%
Bootstrap support for H2Y2F7 as seed ortholog is 100%.
Bootstrap support for Q29EH5 as seed ortholog is 100%.

Group of orthologs #3435. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 D.pseudoobscura:13

H2XRQ7              	100.00%		B5DHW0              	100.00%
                    	       		Q29EB6              	28.77%
Bootstrap support for H2XRQ7 as seed ortholog is 56%.
Alternative seed ortholog is Q9NDQ5 (7 bits away from this cluster)
Bootstrap support for B5DHW0 as seed ortholog is 64%.
Alternative seed ortholog is B5DJF7 (13 bits away from this cluster)

Group of orthologs #3436. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 D.pseudoobscura:111

F6XY19              	100.00%		Q292M5              	100.00%
                    	       		Q292M4              	16.67%
Bootstrap support for F6XY19 as seed ortholog is 100%.
Bootstrap support for Q292M5 as seed ortholog is 100%.

Group of orthologs #3437. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 D.pseudoobscura:111

F6PIQ0              	100.00%		Q298D7              	100.00%
Bootstrap support for F6PIQ0 as seed ortholog is 100%.
Bootstrap support for Q298D7 as seed ortholog is 100%.

Group of orthologs #3438. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 D.pseudoobscura:111

F6RSR2              	100.00%		Q29D00              	100.00%
Bootstrap support for F6RSR2 as seed ortholog is 100%.
Bootstrap support for Q29D00 as seed ortholog is 100%.

Group of orthologs #3439. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 D.pseudoobscura:111

F6VLR0              	100.00%		Q29DT0              	100.00%
Bootstrap support for F6VLR0 as seed ortholog is 100%.
Bootstrap support for Q29DT0 as seed ortholog is 100%.

Group of orthologs #3440. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 D.pseudoobscura:111

F6QZ12              	100.00%		Q2LZU2              	100.00%
Bootstrap support for F6QZ12 as seed ortholog is 100%.
Bootstrap support for Q2LZU2 as seed ortholog is 100%.

Group of orthologs #3441. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 D.pseudoobscura:111

F6W8L4              	100.00%		Q2LZ88              	100.00%
Bootstrap support for F6W8L4 as seed ortholog is 100%.
Bootstrap support for Q2LZ88 as seed ortholog is 100%.

Group of orthologs #3442. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 D.pseudoobscura:111

F6ZVT2              	100.00%		Q29LB7              	100.00%
Bootstrap support for F6ZVT2 as seed ortholog is 100%.
Bootstrap support for Q29LB7 as seed ortholog is 100%.

Group of orthologs #3443. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 D.pseudoobscura:111

Q8HIN8              	100.00%		D2SXZ1              	100.00%
Bootstrap support for Q8HIN8 as seed ortholog is 100%.
Bootstrap support for D2SXZ1 as seed ortholog is 100%.

Group of orthologs #3444. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:111 D.pseudoobscura:111

F7AN54              	100.00%		Q29N96              	100.00%
Bootstrap support for F7AN54 as seed ortholog is 100%.
Bootstrap support for Q29N96 as seed ortholog is 100%.

Group of orthologs #3445. Best score 111 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 D.pseudoobscura:6

H2XVM5              	100.00%		Q29MW1              	100.00%
Bootstrap support for H2XVM5 as seed ortholog is 98%.
Bootstrap support for Q29MW1 as seed ortholog is 67%.
Alternative seed ortholog is Q2M0T7 (6 bits away from this cluster)

Group of orthologs #3446. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 D.pseudoobscura:110

F6XFM9              	100.00%		Q28ZC8              	100.00%
F6TA22              	36.76%		
Bootstrap support for F6XFM9 as seed ortholog is 45%.
Alternative seed ortholog is F6QBH7 (2 bits away from this cluster)
Bootstrap support for Q28ZC8 as seed ortholog is 100%.

Group of orthologs #3447. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 D.pseudoobscura:110

F6ZVS4              	100.00%		Q29AB5              	100.00%
F6UWB9              	29.72%		
Bootstrap support for F6ZVS4 as seed ortholog is 100%.
Bootstrap support for Q29AB5 as seed ortholog is 100%.

Group of orthologs #3448. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 D.pseudoobscura:110

F7AD29              	100.00%		Q29GR7              	100.00%
                    	       		Q295X0              	11.73%
Bootstrap support for F7AD29 as seed ortholog is 100%.
Bootstrap support for Q29GR7 as seed ortholog is 100%.

Group of orthologs #3449. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 D.pseudoobscura:41

F7BJL5              	100.00%		Q29NQ7              	100.00%
                    	       		I5AMN1              	16.97%
Bootstrap support for F7BJL5 as seed ortholog is 100%.
Bootstrap support for Q29NQ7 as seed ortholog is 64%.
Alternative seed ortholog is Q29M79 (41 bits away from this cluster)

Group of orthologs #3450. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 D.pseudoobscura:110

F6SNN1              	100.00%		Q293S3              	100.00%
Bootstrap support for F6SNN1 as seed ortholog is 100%.
Bootstrap support for Q293S3 as seed ortholog is 100%.

Group of orthologs #3451. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 D.pseudoobscura:110

F6WUA7              	100.00%		Q291J1              	100.00%
Bootstrap support for F6WUA7 as seed ortholog is 100%.
Bootstrap support for Q291J1 as seed ortholog is 100%.

Group of orthologs #3452. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 D.pseudoobscura:61

F6ZQ14              	100.00%		Q29AT8              	100.00%
Bootstrap support for F6ZQ14 as seed ortholog is 100%.
Bootstrap support for Q29AT8 as seed ortholog is 93%.

Group of orthologs #3453. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 D.pseudoobscura:110

H2XWJ8              	100.00%		Q29EW3              	100.00%
Bootstrap support for H2XWJ8 as seed ortholog is 100%.
Bootstrap support for Q29EW3 as seed ortholog is 100%.

Group of orthologs #3454. Best score 110 bits
Score difference with first non-orthologous sequence - C.intestinalis:110 D.pseudoobscura:110

H2XY20              	100.00%		Q2LYP9              	100.00%
Bootstrap support for H2XY20 as seed ortholog is 100%.
Bootstrap support for Q2LYP9 as seed ortholog is 100%.

Group of orthologs #3455. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 D.pseudoobscura:109

F6RQT3              	100.00%		B5DJY7              	100.00%
Bootstrap support for F6RQT3 as seed ortholog is 100%.
Bootstrap support for B5DJY7 as seed ortholog is 100%.

Group of orthologs #3456. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 D.pseudoobscura:109

H2XLM9              	100.00%		B5DIT3              	100.00%
Bootstrap support for H2XLM9 as seed ortholog is 100%.
Bootstrap support for B5DIT3 as seed ortholog is 100%.

Group of orthologs #3457. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 D.pseudoobscura:109

F6PML6              	100.00%		Q29H05              	100.00%
Bootstrap support for F6PML6 as seed ortholog is 100%.
Bootstrap support for Q29H05 as seed ortholog is 100%.

Group of orthologs #3458. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 D.pseudoobscura:109

F6XM37              	100.00%		Q293M1              	100.00%
Bootstrap support for F6XM37 as seed ortholog is 100%.
Bootstrap support for Q293M1 as seed ortholog is 100%.

Group of orthologs #3459. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 D.pseudoobscura:109

F6SLJ7              	100.00%		Q29JM4              	100.00%
Bootstrap support for F6SLJ7 as seed ortholog is 100%.
Bootstrap support for Q29JM4 as seed ortholog is 100%.

Group of orthologs #3460. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 D.pseudoobscura:109

H2Y1I8              	100.00%		B5DKT2              	100.00%
Bootstrap support for H2Y1I8 as seed ortholog is 100%.
Bootstrap support for B5DKT2 as seed ortholog is 100%.

Group of orthologs #3461. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 D.pseudoobscura:109

F6W5B3              	100.00%		Q29LT3              	100.00%
Bootstrap support for F6W5B3 as seed ortholog is 100%.
Bootstrap support for Q29LT3 as seed ortholog is 100%.

Group of orthologs #3462. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 D.pseudoobscura:109

F6ZFT6              	100.00%		Q2LYJ3              	100.00%
Bootstrap support for F6ZFT6 as seed ortholog is 100%.
Bootstrap support for Q2LYJ3 as seed ortholog is 100%.

Group of orthologs #3463. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 D.pseudoobscura:29

H2XZH8              	100.00%		Q290X4              	100.00%
Bootstrap support for H2XZH8 as seed ortholog is 100%.
Bootstrap support for Q290X4 as seed ortholog is 98%.

Group of orthologs #3464. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 D.pseudoobscura:109

H2XX77              	100.00%		Q29DT9              	100.00%
Bootstrap support for H2XX77 as seed ortholog is 100%.
Bootstrap support for Q29DT9 as seed ortholog is 100%.

Group of orthologs #3465. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 D.pseudoobscura:109

H2XWZ6              	100.00%		Q29EG2              	100.00%
Bootstrap support for H2XWZ6 as seed ortholog is 100%.
Bootstrap support for Q29EG2 as seed ortholog is 100%.

Group of orthologs #3466. Best score 109 bits
Score difference with first non-orthologous sequence - C.intestinalis:109 D.pseudoobscura:109

Q1RL82              	100.00%		Q29P03              	100.00%
Bootstrap support for Q1RL82 as seed ortholog is 100%.
Bootstrap support for Q29P03 as seed ortholog is 100%.

Group of orthologs #3467. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 D.pseudoobscura:108

F6RDW1              	100.00%		Q28XE0              	100.00%
F6VQ32              	21.00%		
F6T5Q1              	20.00%		
F6QSB8              	13.00%		
Bootstrap support for F6RDW1 as seed ortholog is 93%.
Bootstrap support for Q28XE0 as seed ortholog is 100%.

Group of orthologs #3468. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 D.pseudoobscura:36

H2XL66              	100.00%		B5DXJ1              	100.00%
                    	       		B5E0K7              	51.06%
                    	       		Q28X52              	48.12%
Bootstrap support for H2XL66 as seed ortholog is 100%.
Bootstrap support for B5DXJ1 as seed ortholog is 87%.

Group of orthologs #3469. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 D.pseudoobscura:108

F6Q0V4              	100.00%		Q28XG4              	100.00%
Bootstrap support for F6Q0V4 as seed ortholog is 100%.
Bootstrap support for Q28XG4 as seed ortholog is 100%.

Group of orthologs #3470. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 D.pseudoobscura:108

F6SY22              	100.00%		B5DZF6              	100.00%
Bootstrap support for F6SY22 as seed ortholog is 100%.
Bootstrap support for B5DZF6 as seed ortholog is 100%.

Group of orthologs #3471. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 D.pseudoobscura:108

F6VTY2              	100.00%		Q293H3              	100.00%
Bootstrap support for F6VTY2 as seed ortholog is 100%.
Bootstrap support for Q293H3 as seed ortholog is 100%.

Group of orthologs #3472. Best score 108 bits
Score difference with first non-orthologous sequence - C.intestinalis:108 D.pseudoobscura:108

H2XNI6              	100.00%		Q29HX0              	100.00%
Bootstrap support for H2XNI6 as seed ortholog is 100%.
Bootstrap support for Q29HX0 as seed ortholog is 100%.

Group of orthologs #3473. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 D.pseudoobscura:107

H2Y1H2              	100.00%		Q29PD2              	100.00%
F6UZR9              	11.68%		Q29PD3              	10.74%
F6TV13              	10.40%		
H2XZN6              	8.76%		
Bootstrap support for H2Y1H2 as seed ortholog is 100%.
Bootstrap support for Q29PD2 as seed ortholog is 100%.

Group of orthologs #3474. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 D.pseudoobscura:107

F6YLP6              	100.00%		B5DX71              	100.00%
                    	       		Q296U8              	7.40%
Bootstrap support for F6YLP6 as seed ortholog is 100%.
Bootstrap support for B5DX71 as seed ortholog is 100%.

Group of orthologs #3475. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 D.pseudoobscura:107

H2XN21              	100.00%		B5DNR4              	100.00%
                    	       		B5DXI8              	37.55%
Bootstrap support for H2XN21 as seed ortholog is 100%.
Bootstrap support for B5DNR4 as seed ortholog is 100%.

Group of orthologs #3476. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 D.pseudoobscura:31

Q1RLH3              	100.00%		B5DIF8              	100.00%
                    	       		Q29LN9              	5.92%
Bootstrap support for Q1RLH3 as seed ortholog is 62%.
Alternative seed ortholog is H2Y037 (5 bits away from this cluster)
Bootstrap support for B5DIF8 as seed ortholog is 64%.
Alternative seed ortholog is B5DLH3 (31 bits away from this cluster)

Group of orthologs #3477. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 D.pseudoobscura:107

F6R6M9              	100.00%		B5DJP1              	100.00%
Bootstrap support for F6R6M9 as seed ortholog is 100%.
Bootstrap support for B5DJP1 as seed ortholog is 100%.

Group of orthologs #3478. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 D.pseudoobscura:107

F6QG58              	100.00%		Q294S6              	100.00%
Bootstrap support for F6QG58 as seed ortholog is 100%.
Bootstrap support for Q294S6 as seed ortholog is 100%.

Group of orthologs #3479. Best score 107 bits
Score difference with first non-orthologous sequence - C.intestinalis:107 D.pseudoobscura:107

Q1RL63              	100.00%		Q2M0J8              	100.00%
Bootstrap support for Q1RL63 as seed ortholog is 100%.
Bootstrap support for Q2M0J8 as seed ortholog is 100%.

Group of orthologs #3480. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:106

F6SSR3              	100.00%		Q28XD9              	100.00%
                    	       		Q28XD8              	10.98%
Bootstrap support for F6SSR3 as seed ortholog is 100%.
Bootstrap support for Q28XD9 as seed ortholog is 100%.

Group of orthologs #3481. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:19 D.pseudoobscura:106

F6QH11              	100.00%		Q2M058              	100.00%
                    	       		Q29M12              	11.08%
Bootstrap support for F6QH11 as seed ortholog is 64%.
Alternative seed ortholog is F6PHG8 (19 bits away from this cluster)
Bootstrap support for Q2M058 as seed ortholog is 100%.

Group of orthologs #3482. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:106

F6ZE60              	100.00%		Q29GQ6              	100.00%
                    	       		B5DX47              	61.01%
Bootstrap support for F6ZE60 as seed ortholog is 100%.
Bootstrap support for Q29GQ6 as seed ortholog is 100%.

Group of orthologs #3483. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:106

F6RXF3              	100.00%		Q29EI6              	100.00%
Bootstrap support for F6RXF3 as seed ortholog is 100%.
Bootstrap support for Q29EI6 as seed ortholog is 100%.

Group of orthologs #3484. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:106

H2Y0A6              	100.00%		B5DQN4              	100.00%
Bootstrap support for H2Y0A6 as seed ortholog is 100%.
Bootstrap support for B5DQN4 as seed ortholog is 100%.

Group of orthologs #3485. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:106

F6ZED0              	100.00%		Q29EM5              	100.00%
Bootstrap support for F6ZED0 as seed ortholog is 100%.
Bootstrap support for Q29EM5 as seed ortholog is 100%.

Group of orthologs #3486. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:106

H2XWQ0              	100.00%		B5E1M0              	100.00%
Bootstrap support for H2XWQ0 as seed ortholog is 100%.
Bootstrap support for B5E1M0 as seed ortholog is 100%.

Group of orthologs #3487. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 D.pseudoobscura:106

H2XLZ4              	100.00%		Q298W7              	100.00%
Bootstrap support for H2XLZ4 as seed ortholog is 51%.
Alternative seed ortholog is H2XUX4 (22 bits away from this cluster)
Bootstrap support for Q298W7 as seed ortholog is 100%.

Group of orthologs #3488. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:106

F7BKJ3              	100.00%		Q29EF6              	100.00%
Bootstrap support for F7BKJ3 as seed ortholog is 100%.
Bootstrap support for Q29EF6 as seed ortholog is 100%.

Group of orthologs #3489. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:106

H2XXY8              	100.00%		Q293F8              	100.00%
Bootstrap support for H2XXY8 as seed ortholog is 100%.
Bootstrap support for Q293F8 as seed ortholog is 100%.

Group of orthologs #3490. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:106

H2XWR7              	100.00%		Q297T1              	100.00%
Bootstrap support for H2XWR7 as seed ortholog is 100%.
Bootstrap support for Q297T1 as seed ortholog is 100%.

Group of orthologs #3491. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:106

F7AMQ2              	100.00%		Q2M021              	100.00%
Bootstrap support for F7AMQ2 as seed ortholog is 100%.
Bootstrap support for Q2M021 as seed ortholog is 100%.

Group of orthologs #3492. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:106

H2XRJ8              	100.00%		Q29IK4              	100.00%
Bootstrap support for H2XRJ8 as seed ortholog is 100%.
Bootstrap support for Q29IK4 as seed ortholog is 100%.

Group of orthologs #3493. Best score 106 bits
Score difference with first non-orthologous sequence - C.intestinalis:106 D.pseudoobscura:106

H2Y3U9              	100.00%		Q29EF1              	100.00%
Bootstrap support for H2Y3U9 as seed ortholog is 100%.
Bootstrap support for Q29EF1 as seed ortholog is 100%.

Group of orthologs #3494. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 D.pseudoobscura:9

F6WHA2              	100.00%		Q29JV1              	100.00%
H2XKA5              	8.88%		
Bootstrap support for F6WHA2 as seed ortholog is 81%.
Bootstrap support for Q29JV1 as seed ortholog is 60%.
Alternative seed ortholog is Q292W1 (9 bits away from this cluster)

Group of orthologs #3495. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 D.pseudoobscura:105

F6RMZ6              	100.00%		Q298B4              	100.00%
Bootstrap support for F6RMZ6 as seed ortholog is 100%.
Bootstrap support for Q298B4 as seed ortholog is 100%.

Group of orthologs #3496. Best score 105 bits
Score difference with first non-orthologous sequence - C.intestinalis:105 D.pseudoobscura:105

F6UFW3              	100.00%		Q297J9              	100.00%
Bootstrap support for F6UFW3 as seed ortholog is 100%.
Bootstrap support for Q297J9 as seed ortholog is 100%.

Group of orthologs #3497. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 D.pseudoobscura:104

F7AXY8              	100.00%		Q28ZF0              	100.00%
                    	       		B5E1J3              	47.54%
                    	       		B5E1J2              	36.45%
                    	       		B5DYY4              	7.39%
Bootstrap support for F7AXY8 as seed ortholog is 97%.
Bootstrap support for Q28ZF0 as seed ortholog is 100%.

Group of orthologs #3498. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 D.pseudoobscura:104

H2XKE1              	100.00%		I7M5V6              	100.00%
Bootstrap support for H2XKE1 as seed ortholog is 100%.
Bootstrap support for I7M5V6 as seed ortholog is 100%.

Group of orthologs #3499. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 D.pseudoobscura:104

F6U8M1              	100.00%		Q29N03              	100.00%
Bootstrap support for F6U8M1 as seed ortholog is 100%.
Bootstrap support for Q29N03 as seed ortholog is 100%.

Group of orthologs #3500. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 D.pseudoobscura:104

F6U952              	100.00%		Q2LZL4              	100.00%
Bootstrap support for F6U952 as seed ortholog is 100%.
Bootstrap support for Q2LZL4 as seed ortholog is 100%.

Group of orthologs #3501. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 D.pseudoobscura:104

F6ZRA2              	100.00%		Q29DD9              	100.00%
Bootstrap support for F6ZRA2 as seed ortholog is 100%.
Bootstrap support for Q29DD9 as seed ortholog is 100%.

Group of orthologs #3502. Best score 104 bits
Score difference with first non-orthologous sequence - C.intestinalis:104 D.pseudoobscura:104

H2XSE6              	100.00%		Q297H9              	100.00%
Bootstrap support for H2XSE6 as seed ortholog is 100%.
Bootstrap support for Q297H9 as seed ortholog is 100%.

Group of orthologs #3503. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 D.pseudoobscura:103

F7B7K2              	100.00%		Q29GB6              	100.00%
                    	       		B5DT70              	86.61%
Bootstrap support for F7B7K2 as seed ortholog is 100%.
Bootstrap support for Q29GB6 as seed ortholog is 100%.

Group of orthologs #3504. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 D.pseudoobscura:103

H2XSI8              	100.00%		B5DYZ2              	100.00%
Bootstrap support for H2XSI8 as seed ortholog is 100%.
Bootstrap support for B5DYZ2 as seed ortholog is 100%.

Group of orthologs #3505. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 D.pseudoobscura:103

H2XXI7              	100.00%		Q298V0              	100.00%
Bootstrap support for H2XXI7 as seed ortholog is 100%.
Bootstrap support for Q298V0 as seed ortholog is 100%.

Group of orthologs #3506. Best score 103 bits
Score difference with first non-orthologous sequence - C.intestinalis:103 D.pseudoobscura:103

F7BI48              	100.00%		Q2M003              	100.00%
Bootstrap support for F7BI48 as seed ortholog is 100%.
Bootstrap support for Q2M003 as seed ortholog is 100%.

Group of orthologs #3507. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 D.pseudoobscura:102

F7B4F4              	100.00%		B5DQ42              	100.00%
                    	       		B5DJG3              	66.17%
Bootstrap support for F7B4F4 as seed ortholog is 100%.
Bootstrap support for B5DQ42 as seed ortholog is 100%.

Group of orthologs #3508. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 D.pseudoobscura:33

F6Y1B6              	100.00%		Q292M2              	100.00%
Bootstrap support for F6Y1B6 as seed ortholog is 100%.
Bootstrap support for Q292M2 as seed ortholog is 81%.

Group of orthologs #3509. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:31 D.pseudoobscura:45

F6UBS8              	100.00%		Q29MI9              	100.00%
Bootstrap support for F6UBS8 as seed ortholog is 77%.
Bootstrap support for Q29MI9 as seed ortholog is 81%.

Group of orthologs #3510. Best score 102 bits
Score difference with first non-orthologous sequence - C.intestinalis:102 D.pseudoobscura:102

F7ANQ7              	100.00%		Q29J44              	100.00%
Bootstrap support for F7ANQ7 as seed ortholog is 100%.
Bootstrap support for Q29J44 as seed ortholog is 100%.

Group of orthologs #3511. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 D.pseudoobscura:54

F6ULW5              	100.00%		Q29P42              	100.00%
F6VJJ2              	100.00%		Q296D6              	100.00%
F6TDC8              	5.54%		Q2M133              	37.36%
                    	       		Q29IB8              	11.33%
                    	       		Q29GM6              	11.24%
                    	       		Q28ZL7              	5.71%
Bootstrap support for F6ULW5 as seed ortholog is 100%.
Bootstrap support for F6VJJ2 as seed ortholog is 100%.
Bootstrap support for Q29P42 as seed ortholog is 84%.
Bootstrap support for Q296D6 as seed ortholog is 59%.
Alternative seed ortholog is Q29BV2 (54 bits away from this cluster)

Group of orthologs #3512. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 D.pseudoobscura:101

H2XLQ1              	100.00%		Q293R6              	100.00%
F7AFJ0              	7.94%		
F6R8A8              	7.75%		
F6URN5              	7.44%		
Bootstrap support for H2XLQ1 as seed ortholog is 100%.
Bootstrap support for Q293R6 as seed ortholog is 100%.

Group of orthologs #3513. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:37 D.pseudoobscura:38

F6R9M9              	100.00%		Q24621              	100.00%
F6R9V2              	100.00%		
F6R9G4              	89.76%		
Bootstrap support for F6R9M9 as seed ortholog is 93%.
Bootstrap support for F6R9V2 as seed ortholog is 93%.
Bootstrap support for Q24621 as seed ortholog is 94%.

Group of orthologs #3514. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 D.pseudoobscura:101

H2XYM0              	100.00%		Q28YX9              	100.00%
F6ZDG8              	17.97%		
H2XN32              	8.71%		
Bootstrap support for H2XYM0 as seed ortholog is 100%.
Bootstrap support for Q28YX9 as seed ortholog is 100%.

Group of orthologs #3515. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:15 D.pseudoobscura:101

H2XT36              	100.00%		Q28XR2              	100.00%
                    	       		Q2M0E0              	42.65%
Bootstrap support for H2XT36 as seed ortholog is 82%.
Bootstrap support for Q28XR2 as seed ortholog is 100%.

Group of orthologs #3516. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 D.pseudoobscura:101

F6V0V9              	100.00%		B5DLY1              	100.00%
Bootstrap support for F6V0V9 as seed ortholog is 100%.
Bootstrap support for B5DLY1 as seed ortholog is 100%.

Group of orthologs #3517. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 D.pseudoobscura:101

F6UP59              	100.00%		Q296J9              	100.00%
Bootstrap support for F6UP59 as seed ortholog is 100%.
Bootstrap support for Q296J9 as seed ortholog is 100%.

Group of orthologs #3518. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 D.pseudoobscura:101

Q0E670              	100.00%		B5DQF2              	100.00%
Bootstrap support for Q0E670 as seed ortholog is 100%.
Bootstrap support for B5DQF2 as seed ortholog is 100%.

Group of orthologs #3519. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 D.pseudoobscura:101

F6X555              	100.00%		Q29MA7              	100.00%
Bootstrap support for F6X555 as seed ortholog is 97%.
Bootstrap support for Q29MA7 as seed ortholog is 100%.

Group of orthologs #3520. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 D.pseudoobscura:101

H2XYK0              	100.00%		Q28ZF9              	100.00%
Bootstrap support for H2XYK0 as seed ortholog is 100%.
Bootstrap support for Q28ZF9 as seed ortholog is 100%.

Group of orthologs #3521. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 D.pseudoobscura:101

H2XKM0              	100.00%		Q29L18              	100.00%
Bootstrap support for H2XKM0 as seed ortholog is 100%.
Bootstrap support for Q29L18 as seed ortholog is 100%.

Group of orthologs #3522. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 D.pseudoobscura:101

H2XYR7              	100.00%		Q29IA4              	100.00%
Bootstrap support for H2XYR7 as seed ortholog is 100%.
Bootstrap support for Q29IA4 as seed ortholog is 100%.

Group of orthologs #3523. Best score 101 bits
Score difference with first non-orthologous sequence - C.intestinalis:101 D.pseudoobscura:5

H2XZI3              	100.00%		Q29IW1              	100.00%
Bootstrap support for H2XZI3 as seed ortholog is 100%.
Bootstrap support for Q29IW1 as seed ortholog is 33%.
Alternative seed ortholog is B5DH31 (5 bits away from this cluster)

Group of orthologs #3524. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 D.pseudoobscura:50

F6SBJ2              	100.00%		Q299F5              	100.00%
H2XM96              	9.68%		
Bootstrap support for F6SBJ2 as seed ortholog is 100%.
Bootstrap support for Q299F5 as seed ortholog is 94%.

Group of orthologs #3525. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 D.pseudoobscura:100

H2XV16              	100.00%		Q29NS4              	100.00%
H2XMF7              	11.99%		
Bootstrap support for H2XV16 as seed ortholog is 100%.
Bootstrap support for Q29NS4 as seed ortholog is 100%.

Group of orthologs #3526. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 D.pseudoobscura:40

F6QR63              	100.00%		Q295J4              	100.00%
Bootstrap support for F6QR63 as seed ortholog is 100%.
Bootstrap support for Q295J4 as seed ortholog is 87%.

Group of orthologs #3527. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:100 D.pseudoobscura:100

F6XB46              	100.00%		Q29JX7              	100.00%
Bootstrap support for F6XB46 as seed ortholog is 100%.
Bootstrap support for Q29JX7 as seed ortholog is 100%.

Group of orthologs #3528. Best score 100 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 D.pseudoobscura:100

H2XZ89              	100.00%		Q29DQ5              	100.00%
Bootstrap support for H2XZ89 as seed ortholog is 99%.
Bootstrap support for Q29DQ5 as seed ortholog is 100%.

Group of orthologs #3529. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:23 D.pseudoobscura:99

F6RC45              	100.00%		Q29CD8              	100.00%
F6RGU6              	7.29%		B5DX08              	30.04%
Bootstrap support for F6RC45 as seed ortholog is 72%.
Alternative seed ortholog is F6RBY6 (23 bits away from this cluster)
Bootstrap support for Q29CD8 as seed ortholog is 100%.

Group of orthologs #3530. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 D.pseudoobscura:35

H2XSX2              	100.00%		Q29C07              	100.00%
                    	       		B5DXE5              	7.74%
                    	       		B5DXQ9              	7.16%
Bootstrap support for H2XSX2 as seed ortholog is 100%.
Bootstrap support for Q29C07 as seed ortholog is 91%.

Group of orthologs #3531. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 D.pseudoobscura:99

F6YAZ4              	100.00%		B5DUL5              	100.00%
                    	       		B5DNJ2              	79.43%
Bootstrap support for F6YAZ4 as seed ortholog is 100%.
Bootstrap support for B5DUL5 as seed ortholog is 100%.

Group of orthologs #3532. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 D.pseudoobscura:99

F6QK29              	100.00%		Q298J3              	100.00%
Bootstrap support for F6QK29 as seed ortholog is 100%.
Bootstrap support for Q298J3 as seed ortholog is 100%.

Group of orthologs #3533. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 D.pseudoobscura:99

F6WNP9              	100.00%		Q299H6              	100.00%
Bootstrap support for F6WNP9 as seed ortholog is 100%.
Bootstrap support for Q299H6 as seed ortholog is 100%.

Group of orthologs #3534. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:28 D.pseudoobscura:27

F6PW43              	100.00%		Q2LYS4              	100.00%
Bootstrap support for F6PW43 as seed ortholog is 93%.
Bootstrap support for Q2LYS4 as seed ortholog is 90%.

Group of orthologs #3535. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 D.pseudoobscura:99

F6YVB6              	100.00%		Q29A79              	100.00%
Bootstrap support for F6YVB6 as seed ortholog is 100%.
Bootstrap support for Q29A79 as seed ortholog is 100%.

Group of orthologs #3536. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 D.pseudoobscura:55

F6YMZ5              	100.00%		Q29ID4              	100.00%
Bootstrap support for F6YMZ5 as seed ortholog is 100%.
Bootstrap support for Q29ID4 as seed ortholog is 100%.

Group of orthologs #3537. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 D.pseudoobscura:99

F6ZBT0              	100.00%		Q29HY0              	100.00%
Bootstrap support for F6ZBT0 as seed ortholog is 100%.
Bootstrap support for Q29HY0 as seed ortholog is 100%.

Group of orthologs #3538. Best score 99 bits
Score difference with first non-orthologous sequence - C.intestinalis:99 D.pseudoobscura:99

H2XWS2              	100.00%		Q299H5              	100.00%
Bootstrap support for H2XWS2 as seed ortholog is 100%.
Bootstrap support for Q299H5 as seed ortholog is 100%.

Group of orthologs #3539. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 D.pseudoobscura:98

F6XAM7              	100.00%		B5DPH1              	100.00%
F7AVZ3              	26.24%		
F6RJA6              	20.81%		
F6RI21              	20.19%		
Bootstrap support for F6XAM7 as seed ortholog is 100%.
Bootstrap support for B5DPH1 as seed ortholog is 100%.

Group of orthologs #3540. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 D.pseudoobscura:98

F6VW31              	100.00%		B5DLJ4              	100.00%
                    	       		Q29J42              	84.84%
                    	       		B5DXX7              	49.25%
Bootstrap support for F6VW31 as seed ortholog is 100%.
Bootstrap support for B5DLJ4 as seed ortholog is 100%.

Group of orthologs #3541. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 D.pseudoobscura:98

H2XJN8              	100.00%		Q2M0C3              	100.00%
                    	       		Q298W9              	35.64%
Bootstrap support for H2XJN8 as seed ortholog is 100%.
Bootstrap support for Q2M0C3 as seed ortholog is 100%.

Group of orthologs #3542. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 D.pseudoobscura:98

F7AAI3              	100.00%		B5DS71              	100.00%
Bootstrap support for F7AAI3 as seed ortholog is 100%.
Bootstrap support for B5DS71 as seed ortholog is 100%.

Group of orthologs #3543. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 D.pseudoobscura:98

F7A1A8              	100.00%		B5DTG6              	100.00%
Bootstrap support for F7A1A8 as seed ortholog is 100%.
Bootstrap support for B5DTG6 as seed ortholog is 100%.

Group of orthologs #3544. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 D.pseudoobscura:98

F6UAV0              	100.00%		Q29EC9              	100.00%
Bootstrap support for F6UAV0 as seed ortholog is 100%.
Bootstrap support for Q29EC9 as seed ortholog is 100%.

Group of orthologs #3545. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 D.pseudoobscura:98

F6U959              	100.00%		Q29IP9              	100.00%
Bootstrap support for F6U959 as seed ortholog is 100%.
Bootstrap support for Q29IP9 as seed ortholog is 100%.

Group of orthologs #3546. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 D.pseudoobscura:98

F6WFE5              	100.00%		Q2M0Y4              	100.00%
Bootstrap support for F6WFE5 as seed ortholog is 100%.
Bootstrap support for Q2M0Y4 as seed ortholog is 100%.

Group of orthologs #3547. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 D.pseudoobscura:98

F7A410              	100.00%		Q29IK6              	100.00%
Bootstrap support for F7A410 as seed ortholog is 100%.
Bootstrap support for Q29IK6 as seed ortholog is 100%.

Group of orthologs #3548. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:98 D.pseudoobscura:98

H2XRE3              	100.00%		Q29C86              	100.00%
Bootstrap support for H2XRE3 as seed ortholog is 100%.
Bootstrap support for Q29C86 as seed ortholog is 100%.

Group of orthologs #3549. Best score 98 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 D.pseudoobscura:98

H2XYW1              	100.00%		Q294U6              	100.00%
Bootstrap support for H2XYW1 as seed ortholog is 93%.
Bootstrap support for Q294U6 as seed ortholog is 100%.

Group of orthologs #3550. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 D.pseudoobscura:97

H2XRD8              	100.00%		B5DIH0              	100.00%
                    	       		Q29LN6              	28.35%
Bootstrap support for H2XRD8 as seed ortholog is 100%.
Bootstrap support for B5DIH0 as seed ortholog is 100%.

Group of orthologs #3551. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 D.pseudoobscura:97

F6R4A6              	100.00%		Q29DA2              	100.00%
Bootstrap support for F6R4A6 as seed ortholog is 100%.
Bootstrap support for Q29DA2 as seed ortholog is 100%.

Group of orthologs #3552. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 D.pseudoobscura:38

F7AD14              	100.00%		P54364              	100.00%
Bootstrap support for F7AD14 as seed ortholog is 100%.
Bootstrap support for P54364 as seed ortholog is 94%.

Group of orthologs #3553. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 D.pseudoobscura:97

F7A9H5              	100.00%		Q29EJ5              	100.00%
Bootstrap support for F7A9H5 as seed ortholog is 100%.
Bootstrap support for Q29EJ5 as seed ortholog is 100%.

Group of orthologs #3554. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 D.pseudoobscura:97

H2XRU3              	100.00%		Q291D3              	100.00%
Bootstrap support for H2XRU3 as seed ortholog is 100%.
Bootstrap support for Q291D3 as seed ortholog is 100%.

Group of orthologs #3555. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 D.pseudoobscura:97

H2XV35              	100.00%		Q28ZM8              	100.00%
Bootstrap support for H2XV35 as seed ortholog is 100%.
Bootstrap support for Q28ZM8 as seed ortholog is 100%.

Group of orthologs #3556. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:97 D.pseudoobscura:97

H2Y2B5              	100.00%		Q298W6              	100.00%
Bootstrap support for H2Y2B5 as seed ortholog is 100%.
Bootstrap support for Q298W6 as seed ortholog is 100%.

Group of orthologs #3557. Best score 97 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 D.pseudoobscura:97

H2Y3A1              	100.00%		Q29DH8              	100.00%
Bootstrap support for H2Y3A1 as seed ortholog is 96%.
Bootstrap support for Q29DH8 as seed ortholog is 100%.

Group of orthologs #3558. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 D.pseudoobscura:96

F6YYF3              	100.00%		B5DZE7              	100.00%
F6SY47              	94.78%		
Bootstrap support for F6YYF3 as seed ortholog is 100%.
Bootstrap support for B5DZE7 as seed ortholog is 100%.

Group of orthologs #3559. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 D.pseudoobscura:96

F6SD13              	100.00%		Q299H9              	100.00%
Bootstrap support for F6SD13 as seed ortholog is 100%.
Bootstrap support for Q299H9 as seed ortholog is 100%.

Group of orthologs #3560. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 D.pseudoobscura:96

F6Z2L4              	100.00%		Q296A6              	100.00%
Bootstrap support for F6Z2L4 as seed ortholog is 100%.
Bootstrap support for Q296A6 as seed ortholog is 100%.

Group of orthologs #3561. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 D.pseudoobscura:96

F7AQH5              	100.00%		Q29CB7              	100.00%
Bootstrap support for F7AQH5 as seed ortholog is 100%.
Bootstrap support for Q29CB7 as seed ortholog is 100%.

Group of orthologs #3562. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 D.pseudoobscura:96

H2XWR1              	100.00%		B5DZX4              	100.00%
Bootstrap support for H2XWR1 as seed ortholog is 100%.
Bootstrap support for B5DZX4 as seed ortholog is 100%.

Group of orthologs #3563. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 D.pseudoobscura:96

F7BAE5              	100.00%		Q29D02              	100.00%
Bootstrap support for F7BAE5 as seed ortholog is 100%.
Bootstrap support for Q29D02 as seed ortholog is 100%.

Group of orthologs #3564. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 D.pseudoobscura:96

H2XTD8              	100.00%		Q297W7              	100.00%
Bootstrap support for H2XTD8 as seed ortholog is 100%.
Bootstrap support for Q297W7 as seed ortholog is 100%.

Group of orthologs #3565. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 D.pseudoobscura:96

Q8HIN7              	100.00%		D2SXY7              	100.00%
Bootstrap support for Q8HIN7 as seed ortholog is 100%.
Bootstrap support for D2SXY7 as seed ortholog is 100%.

Group of orthologs #3566. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 D.pseudoobscura:96

H2XP99              	100.00%		Q29G54              	100.00%
Bootstrap support for H2XP99 as seed ortholog is 95%.
Bootstrap support for Q29G54 as seed ortholog is 100%.

Group of orthologs #3567. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 D.pseudoobscura:96

H2XN51              	100.00%		Q29M21              	100.00%
Bootstrap support for H2XN51 as seed ortholog is 100%.
Bootstrap support for Q29M21 as seed ortholog is 100%.

Group of orthologs #3568. Best score 96 bits
Score difference with first non-orthologous sequence - C.intestinalis:96 D.pseudoobscura:96

Q4H3E8              	100.00%		Q29GS5              	100.00%
Bootstrap support for Q4H3E8 as seed ortholog is 100%.
Bootstrap support for Q29GS5 as seed ortholog is 100%.

Group of orthologs #3569. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 D.pseudoobscura:95

F6RMW3              	100.00%		Q29H06              	100.00%
                    	       		B5DT33              	63.27%
Bootstrap support for F6RMW3 as seed ortholog is 100%.
Bootstrap support for Q29H06 as seed ortholog is 100%.

Group of orthologs #3570. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 D.pseudoobscura:95

F6PM15              	100.00%		B5DTE3              	100.00%
Bootstrap support for F6PM15 as seed ortholog is 100%.
Bootstrap support for B5DTE3 as seed ortholog is 100%.

Group of orthologs #3571. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 D.pseudoobscura:95

F6SAX1              	100.00%		Q2LYV9              	100.00%
Bootstrap support for F6SAX1 as seed ortholog is 100%.
Bootstrap support for Q2LYV9 as seed ortholog is 100%.

Group of orthologs #3572. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 D.pseudoobscura:95

H2XN37              	100.00%		Q29IK8              	100.00%
Bootstrap support for H2XN37 as seed ortholog is 100%.
Bootstrap support for Q29IK8 as seed ortholog is 100%.

Group of orthologs #3573. Best score 95 bits
Score difference with first non-orthologous sequence - C.intestinalis:95 D.pseudoobscura:95

H2XVT6              	100.00%		Q2LZL9              	100.00%
Bootstrap support for H2XVT6 as seed ortholog is 100%.
Bootstrap support for Q2LZL9 as seed ortholog is 100%.

Group of orthologs #3574. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 D.pseudoobscura:94

H2XKK2              	100.00%		Q29BF7              	100.00%
                    	       		Q29IL0              	5.38%
Bootstrap support for H2XKK2 as seed ortholog is 100%.
Bootstrap support for Q29BF7 as seed ortholog is 100%.

Group of orthologs #3575. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 D.pseudoobscura:94

F6WVZ0              	100.00%		Q28ZP4              	100.00%
Bootstrap support for F6WVZ0 as seed ortholog is 100%.
Bootstrap support for Q28ZP4 as seed ortholog is 100%.

Group of orthologs #3576. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 D.pseudoobscura:94

F6Q4L9              	100.00%		Q29K59              	100.00%
Bootstrap support for F6Q4L9 as seed ortholog is 100%.
Bootstrap support for Q29K59 as seed ortholog is 100%.

Group of orthologs #3577. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 D.pseudoobscura:94

F6UVD1              	100.00%		Q29C53              	100.00%
Bootstrap support for F6UVD1 as seed ortholog is 100%.
Bootstrap support for Q29C53 as seed ortholog is 100%.

Group of orthologs #3578. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 D.pseudoobscura:94

H2XYM5              	100.00%		Q28XZ0              	100.00%
Bootstrap support for H2XYM5 as seed ortholog is 100%.
Bootstrap support for Q28XZ0 as seed ortholog is 100%.

Group of orthologs #3579. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 D.pseudoobscura:94

F7A435              	100.00%		Q29MQ0              	100.00%
Bootstrap support for F7A435 as seed ortholog is 100%.
Bootstrap support for Q29MQ0 as seed ortholog is 100%.

Group of orthologs #3580. Best score 94 bits
Score difference with first non-orthologous sequence - C.intestinalis:94 D.pseudoobscura:94

H2XV19              	100.00%		Q29F88              	100.00%
Bootstrap support for H2XV19 as seed ortholog is 100%.
Bootstrap support for Q29F88 as seed ortholog is 100%.

Group of orthologs #3581. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 D.pseudoobscura:93

H2XJX4              	100.00%		Q29FV4              	100.00%
                    	       		B5DIC1              	23.77%
Bootstrap support for H2XJX4 as seed ortholog is 100%.
Bootstrap support for Q29FV4 as seed ortholog is 100%.

Group of orthologs #3582. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 D.pseudoobscura:93

F6S840              	100.00%		Q28Y74              	100.00%
Bootstrap support for F6S840 as seed ortholog is 100%.
Bootstrap support for Q28Y74 as seed ortholog is 100%.

Group of orthologs #3583. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 D.pseudoobscura:93

F6XYG2              	100.00%		Q293A6              	100.00%
Bootstrap support for F6XYG2 as seed ortholog is 100%.
Bootstrap support for Q293A6 as seed ortholog is 100%.

Group of orthologs #3584. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 D.pseudoobscura:93

F6XC11              	100.00%		Q29C67              	100.00%
Bootstrap support for F6XC11 as seed ortholog is 100%.
Bootstrap support for Q29C67 as seed ortholog is 100%.

Group of orthologs #3585. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 D.pseudoobscura:32

H2XSJ3              	100.00%		Q29NV0              	100.00%
Bootstrap support for H2XSJ3 as seed ortholog is 100%.
Bootstrap support for Q29NV0 as seed ortholog is 97%.

Group of orthologs #3586. Best score 93 bits
Score difference with first non-orthologous sequence - C.intestinalis:93 D.pseudoobscura:93

H2Y216              	100.00%		Q29JG8              	100.00%
Bootstrap support for H2Y216 as seed ortholog is 100%.
Bootstrap support for Q29JG8 as seed ortholog is 100%.

Group of orthologs #3587. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 D.pseudoobscura:29

F6SR69              	100.00%		Q28WP2              	100.00%
                    	       		B5DJ54              	8.92%
Bootstrap support for F6SR69 as seed ortholog is 100%.
Bootstrap support for Q28WP2 as seed ortholog is 75%.

Group of orthologs #3588. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 D.pseudoobscura:45

H2Y135              	100.00%		Q28ZN0              	100.00%
                    	       		Q28ZN1              	35.07%
Bootstrap support for H2Y135 as seed ortholog is 100%.
Bootstrap support for Q28ZN0 as seed ortholog is 98%.

Group of orthologs #3589. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 D.pseudoobscura:92

H2XQN1              	100.00%		Q29J18              	100.00%
                    	       		Q298H9              	26.67%
Bootstrap support for H2XQN1 as seed ortholog is 100%.
Bootstrap support for Q29J18 as seed ortholog is 100%.

Group of orthologs #3590. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 D.pseudoobscura:92

F6U857              	100.00%		Q29BD8              	100.00%
Bootstrap support for F6U857 as seed ortholog is 100%.
Bootstrap support for Q29BD8 as seed ortholog is 100%.

Group of orthologs #3591. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 D.pseudoobscura:92

F6XHU3              	100.00%		Q292R2              	100.00%
Bootstrap support for F6XHU3 as seed ortholog is 98%.
Bootstrap support for Q292R2 as seed ortholog is 100%.

Group of orthologs #3592. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 D.pseudoobscura:92

F6YRL7              	100.00%		Q298K4              	100.00%
Bootstrap support for F6YRL7 as seed ortholog is 100%.
Bootstrap support for Q298K4 as seed ortholog is 100%.

Group of orthologs #3593. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 D.pseudoobscura:92

F6ZGB7              	100.00%		Q29MA5              	100.00%
Bootstrap support for F6ZGB7 as seed ortholog is 100%.
Bootstrap support for Q29MA5 as seed ortholog is 100%.

Group of orthologs #3594. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 D.pseudoobscura:92

H2XSR9              	100.00%		Q298M2              	100.00%
Bootstrap support for H2XSR9 as seed ortholog is 93%.
Bootstrap support for Q298M2 as seed ortholog is 100%.

Group of orthologs #3595. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 D.pseudoobscura:92

H2XTS0              	100.00%		Q29LJ7              	100.00%
Bootstrap support for H2XTS0 as seed ortholog is 100%.
Bootstrap support for Q29LJ7 as seed ortholog is 100%.

Group of orthologs #3596. Best score 92 bits
Score difference with first non-orthologous sequence - C.intestinalis:92 D.pseudoobscura:92

Q4H363              	100.00%		Q29BL0              	100.00%
Bootstrap support for Q4H363 as seed ortholog is 100%.
Bootstrap support for Q29BL0 as seed ortholog is 100%.

Group of orthologs #3597. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 D.pseudoobscura:91

H2XY48              	100.00%		B5DYG7              	100.00%
F6T511              	26.42%		Q29AA5              	52.65%
F6T526              	16.12%		
F6T505              	12.87%		
F6T518              	7.86%		
Bootstrap support for H2XY48 as seed ortholog is 100%.
Bootstrap support for B5DYG7 as seed ortholog is 100%.

Group of orthologs #3598. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 D.pseudoobscura:91

F6Z3Z5              	100.00%		Q29FV2              	100.00%
                    	       		B5DKP0              	30.42%
                    	       		B5DKP1              	22.73%
Bootstrap support for F6Z3Z5 as seed ortholog is 100%.
Bootstrap support for Q29FV2 as seed ortholog is 100%.

Group of orthologs #3599. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 D.pseudoobscura:91

F6W881              	100.00%		Q294U0              	100.00%
                    	       		B5DUI5              	98.47%
Bootstrap support for F6W881 as seed ortholog is 100%.
Bootstrap support for Q294U0 as seed ortholog is 100%.

Group of orthologs #3600. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 D.pseudoobscura:91

F6UL80              	100.00%		Q298V5              	100.00%
Bootstrap support for F6UL80 as seed ortholog is 100%.
Bootstrap support for Q298V5 as seed ortholog is 100%.

Group of orthologs #3601. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 D.pseudoobscura:91

F6WEI4              	100.00%		Q294B2              	100.00%
Bootstrap support for F6WEI4 as seed ortholog is 100%.
Bootstrap support for Q294B2 as seed ortholog is 100%.

Group of orthologs #3602. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 D.pseudoobscura:91

F6WKB8              	100.00%		Q29BT8              	100.00%
Bootstrap support for F6WKB8 as seed ortholog is 100%.
Bootstrap support for Q29BT8 as seed ortholog is 100%.

Group of orthologs #3603. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 D.pseudoobscura:91

F6XEU0              	100.00%		Q29H70              	100.00%
Bootstrap support for F6XEU0 as seed ortholog is 100%.
Bootstrap support for Q29H70 as seed ortholog is 100%.

Group of orthologs #3604. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 D.pseudoobscura:91

H2XUN8              	100.00%		B5DXH5              	100.00%
Bootstrap support for H2XUN8 as seed ortholog is 100%.
Bootstrap support for B5DXH5 as seed ortholog is 100%.

Group of orthologs #3605. Best score 91 bits
Score difference with first non-orthologous sequence - C.intestinalis:91 D.pseudoobscura:91

F7AQV0              	100.00%		Q29DV3              	100.00%
Bootstrap support for F7AQV0 as seed ortholog is 100%.
Bootstrap support for Q29DV3 as seed ortholog is 100%.

Group of orthologs #3606. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 D.pseudoobscura:90

F6SNI9              	100.00%		Q293G1              	100.00%
Bootstrap support for F6SNI9 as seed ortholog is 100%.
Bootstrap support for Q293G1 as seed ortholog is 100%.

Group of orthologs #3607. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 D.pseudoobscura:90

H2XLS7              	100.00%		B5DK42              	100.00%
Bootstrap support for H2XLS7 as seed ortholog is 100%.
Bootstrap support for B5DK42 as seed ortholog is 100%.

Group of orthologs #3608. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:18 D.pseudoobscura:90

F6TGC0              	100.00%		Q299M9              	100.00%
Bootstrap support for F6TGC0 as seed ortholog is 16%.
Alternative seed ortholog is F6WRI2 (18 bits away from this cluster)
Bootstrap support for Q299M9 as seed ortholog is 100%.

Group of orthologs #3609. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 D.pseudoobscura:90

H2Y340              	100.00%		B5DL77              	100.00%
Bootstrap support for H2Y340 as seed ortholog is 100%.
Bootstrap support for B5DL77 as seed ortholog is 100%.

Group of orthologs #3610. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 D.pseudoobscura:90

F7A7P7              	100.00%		Q29FB0              	100.00%
Bootstrap support for F7A7P7 as seed ortholog is 100%.
Bootstrap support for Q29FB0 as seed ortholog is 100%.

Group of orthologs #3611. Best score 90 bits
Score difference with first non-orthologous sequence - C.intestinalis:90 D.pseudoobscura:90

H2Y1W5              	100.00%		Q2M062              	100.00%
Bootstrap support for H2Y1W5 as seed ortholog is 100%.
Bootstrap support for Q2M062 as seed ortholog is 100%.

Group of orthologs #3612. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 D.pseudoobscura:5

F6TMF8              	100.00%		Q297R6              	100.00%
                    	       		Q299M6              	6.89%
Bootstrap support for F6TMF8 as seed ortholog is 100%.
Bootstrap support for Q297R6 as seed ortholog is 48%.
Alternative seed ortholog is Q29NN0 (5 bits away from this cluster)

Group of orthologs #3613. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 D.pseudoobscura:89

F6W310              	100.00%		Q28XH8              	100.00%
Bootstrap support for F6W310 as seed ortholog is 100%.
Bootstrap support for Q28XH8 as seed ortholog is 100%.

Group of orthologs #3614. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 D.pseudoobscura:89

F6Y9H6              	100.00%		Q28YX3              	100.00%
Bootstrap support for F6Y9H6 as seed ortholog is 100%.
Bootstrap support for Q28YX3 as seed ortholog is 100%.

Group of orthologs #3615. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 D.pseudoobscura:89

H2XRH0              	100.00%		B5DQ37              	100.00%
Bootstrap support for H2XRH0 as seed ortholog is 100%.
Bootstrap support for B5DQ37 as seed ortholog is 100%.

Group of orthologs #3616. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 D.pseudoobscura:89

F6Z1H7              	100.00%		Q29E66              	100.00%
Bootstrap support for F6Z1H7 as seed ortholog is 100%.
Bootstrap support for Q29E66 as seed ortholog is 100%.

Group of orthologs #3617. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 D.pseudoobscura:89

F7AG76              	100.00%		Q29AH5              	100.00%
Bootstrap support for F7AG76 as seed ortholog is 100%.
Bootstrap support for Q29AH5 as seed ortholog is 100%.

Group of orthologs #3618. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 D.pseudoobscura:89

H2XTG7              	100.00%		B5E1D3              	100.00%
Bootstrap support for H2XTG7 as seed ortholog is 100%.
Bootstrap support for B5E1D3 as seed ortholog is 100%.

Group of orthologs #3619. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 D.pseudoobscura:89

H2XRV4              	100.00%		Q28X50              	100.00%
Bootstrap support for H2XRV4 as seed ortholog is 100%.
Bootstrap support for Q28X50 as seed ortholog is 100%.

Group of orthologs #3620. Best score 89 bits
Score difference with first non-orthologous sequence - C.intestinalis:89 D.pseudoobscura:89

H2XXY6              	100.00%		Q2LZ85              	100.00%
Bootstrap support for H2XXY6 as seed ortholog is 100%.
Bootstrap support for Q2LZ85 as seed ortholog is 100%.

Group of orthologs #3621. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 D.pseudoobscura:14

F6SSS2              	100.00%		B5DJM7              	100.00%
                    	       		B5DYC8              	18.30%
                    	       		B5DJA7              	7.19%
Bootstrap support for F6SSS2 as seed ortholog is 100%.
Bootstrap support for B5DJM7 as seed ortholog is 80%.

Group of orthologs #3622. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 D.pseudoobscura:88

F6ZM16              	100.00%		B5DKJ6              	100.00%
                    	       		B5DRJ0              	76.26%
                    	       		B5DRJ2              	76.02%
Bootstrap support for F6ZM16 as seed ortholog is 100%.
Bootstrap support for B5DKJ6 as seed ortholog is 100%.

Group of orthologs #3623. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 D.pseudoobscura:88

H2XMA9              	100.00%		B5DHF4              	100.00%
Bootstrap support for H2XMA9 as seed ortholog is 100%.
Bootstrap support for B5DHF4 as seed ortholog is 100%.

Group of orthologs #3624. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 D.pseudoobscura:88

F6XIK1              	100.00%		Q29A96              	100.00%
Bootstrap support for F6XIK1 as seed ortholog is 100%.
Bootstrap support for Q29A96 as seed ortholog is 100%.

Group of orthologs #3625. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 D.pseudoobscura:24

F7B8M0              	100.00%		Q28Y47              	100.00%
Bootstrap support for F7B8M0 as seed ortholog is 100%.
Bootstrap support for Q28Y47 as seed ortholog is 65%.
Alternative seed ortholog is I5AMY9 (24 bits away from this cluster)

Group of orthologs #3626. Best score 88 bits
Score difference with first non-orthologous sequence - C.intestinalis:88 D.pseudoobscura:88

F7BA51              	100.00%		Q29EQ0              	100.00%
Bootstrap support for F7BA51 as seed ortholog is 100%.
Bootstrap support for Q29EQ0 as seed ortholog is 100%.

Group of orthologs #3627. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:87

F6SSG7              	100.00%		B5DVY8              	100.00%
Q4H301              	23.25%		
Bootstrap support for F6SSG7 as seed ortholog is 100%.
Bootstrap support for B5DVY8 as seed ortholog is 100%.

Group of orthologs #3628. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:87

F6RJZ1              	100.00%		Q295B5              	100.00%
Bootstrap support for F6RJZ1 as seed ortholog is 100%.
Bootstrap support for Q295B5 as seed ortholog is 100%.

Group of orthologs #3629. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:87

F6Q5B7              	100.00%		Q29H81              	100.00%
Bootstrap support for F6Q5B7 as seed ortholog is 100%.
Bootstrap support for Q29H81 as seed ortholog is 100%.

Group of orthologs #3630. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:87

F7BPC9              	100.00%		B5DWD7              	100.00%
Bootstrap support for F7BPC9 as seed ortholog is 100%.
Bootstrap support for B5DWD7 as seed ortholog is 100%.

Group of orthologs #3631. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:87

H2XWA4              	100.00%		B5DPS8              	100.00%
Bootstrap support for H2XWA4 as seed ortholog is 100%.
Bootstrap support for B5DPS8 as seed ortholog is 100%.

Group of orthologs #3632. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:87

F6TFU0              	100.00%		Q29PE3              	100.00%
Bootstrap support for F6TFU0 as seed ortholog is 100%.
Bootstrap support for Q29PE3 as seed ortholog is 100%.

Group of orthologs #3633. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:87

F7B2I2              	100.00%		Q297T7              	100.00%
Bootstrap support for F7B2I2 as seed ortholog is 100%.
Bootstrap support for Q297T7 as seed ortholog is 100%.

Group of orthologs #3634. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:87

H2XZE6              	100.00%		Q28WJ9              	100.00%
Bootstrap support for H2XZE6 as seed ortholog is 100%.
Bootstrap support for Q28WJ9 as seed ortholog is 100%.

Group of orthologs #3635. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:87

F7B0J2              	100.00%		Q29IC9              	100.00%
Bootstrap support for F7B0J2 as seed ortholog is 100%.
Bootstrap support for Q29IC9 as seed ortholog is 100%.

Group of orthologs #3636. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:34

H2XY09              	100.00%		Q29EZ3              	100.00%
Bootstrap support for H2XY09 as seed ortholog is 100%.
Bootstrap support for Q29EZ3 as seed ortholog is 97%.

Group of orthologs #3637. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:87

H2XR45              	100.00%		Q29NL3              	100.00%
Bootstrap support for H2XR45 as seed ortholog is 100%.
Bootstrap support for Q29NL3 as seed ortholog is 100%.

Group of orthologs #3638. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:87

H2XXH3              	100.00%		Q29L79              	100.00%
Bootstrap support for H2XXH3 as seed ortholog is 100%.
Bootstrap support for Q29L79 as seed ortholog is 100%.

Group of orthologs #3639. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:87

H2XVS6              	100.00%		Q2LZY1              	100.00%
Bootstrap support for H2XVS6 as seed ortholog is 100%.
Bootstrap support for Q2LZY1 as seed ortholog is 100%.

Group of orthologs #3640. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:87

H2XX36              	100.00%		Q2LZ91              	100.00%
Bootstrap support for H2XX36 as seed ortholog is 100%.
Bootstrap support for Q2LZ91 as seed ortholog is 100%.

Group of orthologs #3641. Best score 87 bits
Score difference with first non-orthologous sequence - C.intestinalis:87 D.pseudoobscura:20

Q4H3N8              	100.00%		Q29IN4              	100.00%
Bootstrap support for Q4H3N8 as seed ortholog is 100%.
Bootstrap support for Q29IN4 as seed ortholog is 90%.

Group of orthologs #3642. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:27 D.pseudoobscura:86

H2Y2I7              	100.00%		Q2LYN3              	100.00%
                    	       		Q29MD5              	9.42%
                    	       		Q28Z81              	7.88%
                    	       		B5DN25              	7.02%
                    	       		B5DPR5              	5.65%
                    	       		B5DNR0              	5.31%
Bootstrap support for H2Y2I7 as seed ortholog is 54%.
Alternative seed ortholog is Q4H2J7 (27 bits away from this cluster)
Bootstrap support for Q2LYN3 as seed ortholog is 100%.

Group of orthologs #3643. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 D.pseudoobscura:86

H2Y0B5              	100.00%		B5DWB1              	100.00%
                    	       		B5DP04              	83.39%
                    	       		Q29KJ6              	22.15%
Bootstrap support for H2Y0B5 as seed ortholog is 100%.
Bootstrap support for B5DWB1 as seed ortholog is 100%.

Group of orthologs #3644. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 D.pseudoobscura:86

F6ZTY6              	100.00%		B5DMP9              	100.00%
Bootstrap support for F6ZTY6 as seed ortholog is 100%.
Bootstrap support for B5DMP9 as seed ortholog is 100%.

Group of orthologs #3645. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 D.pseudoobscura:86

H2XTV2              	100.00%		B5DNW5              	100.00%
Bootstrap support for H2XTV2 as seed ortholog is 100%.
Bootstrap support for B5DNW5 as seed ortholog is 100%.

Group of orthologs #3646. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 D.pseudoobscura:7

F7AE88              	100.00%		Q298N9              	100.00%
Bootstrap support for F7AE88 as seed ortholog is 100%.
Bootstrap support for Q298N9 as seed ortholog is 55%.
Alternative seed ortholog is Q295I6 (7 bits away from this cluster)

Group of orthologs #3647. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 D.pseudoobscura:86

F7AP11              	100.00%		Q29F50              	100.00%
Bootstrap support for F7AP11 as seed ortholog is 100%.
Bootstrap support for Q29F50 as seed ortholog is 100%.

Group of orthologs #3648. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 D.pseudoobscura:86

H2XQC0              	100.00%		Q294G7              	100.00%
Bootstrap support for H2XQC0 as seed ortholog is 100%.
Bootstrap support for Q294G7 as seed ortholog is 100%.

Group of orthologs #3649. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 D.pseudoobscura:86

F7BDJ0              	100.00%		Q29G64              	100.00%
Bootstrap support for F7BDJ0 as seed ortholog is 56%.
Alternative seed ortholog is F6SKT1 (2 bits away from this cluster)
Bootstrap support for Q29G64 as seed ortholog is 100%.

Group of orthologs #3650. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 D.pseudoobscura:86

H2XVX4              	100.00%		Q29CQ5              	100.00%
Bootstrap support for H2XVX4 as seed ortholog is 100%.
Bootstrap support for Q29CQ5 as seed ortholog is 100%.

Group of orthologs #3651. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 D.pseudoobscura:86

H2XVB4              	100.00%		Q29DV8              	100.00%
Bootstrap support for H2XVB4 as seed ortholog is 100%.
Bootstrap support for Q29DV8 as seed ortholog is 100%.

Group of orthologs #3652. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 D.pseudoobscura:86

H2XYR3              	100.00%		Q29DI1              	100.00%
Bootstrap support for H2XYR3 as seed ortholog is 100%.
Bootstrap support for Q29DI1 as seed ortholog is 100%.

Group of orthologs #3653. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 D.pseudoobscura:86

H2XSV0              	100.00%		Q2M0F4              	100.00%
Bootstrap support for H2XSV0 as seed ortholog is 100%.
Bootstrap support for Q2M0F4 as seed ortholog is 100%.

Group of orthologs #3654. Best score 86 bits
Score difference with first non-orthologous sequence - C.intestinalis:86 D.pseudoobscura:86

H2XZH5              	100.00%		Q2M1A4              	100.00%
Bootstrap support for H2XZH5 as seed ortholog is 100%.
Bootstrap support for Q2M1A4 as seed ortholog is 100%.

Group of orthologs #3655. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 D.pseudoobscura:85

F6WES8              	100.00%		B5DLE0              	100.00%
Bootstrap support for F6WES8 as seed ortholog is 100%.
Bootstrap support for B5DLE0 as seed ortholog is 100%.

Group of orthologs #3656. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 D.pseudoobscura:27

H2XK25              	100.00%		B5DV36              	100.00%
Bootstrap support for H2XK25 as seed ortholog is 77%.
Bootstrap support for B5DV36 as seed ortholog is 92%.

Group of orthologs #3657. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 D.pseudoobscura:85

H2XQR9              	100.00%		B5DVG5              	100.00%
Bootstrap support for H2XQR9 as seed ortholog is 100%.
Bootstrap support for B5DVG5 as seed ortholog is 100%.

Group of orthologs #3658. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:36 D.pseudoobscura:85

H2XTT8              	100.00%		Q292P0              	100.00%
Bootstrap support for H2XTT8 as seed ortholog is 99%.
Bootstrap support for Q292P0 as seed ortholog is 100%.

Group of orthologs #3659. Best score 85 bits
Score difference with first non-orthologous sequence - C.intestinalis:85 D.pseudoobscura:85

H2XX34              	100.00%		Q296J6              	100.00%
Bootstrap support for H2XX34 as seed ortholog is 100%.
Bootstrap support for Q296J6 as seed ortholog is 100%.

Group of orthologs #3660. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 D.pseudoobscura:84

F6YQ94              	100.00%		Q298S6              	100.00%
                    	       		I5ANV3              	11.96%
Bootstrap support for F6YQ94 as seed ortholog is 100%.
Bootstrap support for Q298S6 as seed ortholog is 100%.

Group of orthologs #3661. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:2 D.pseudoobscura:84

F7BF76              	100.00%		Q294G3              	100.00%
                    	       		Q295A7              	9.05%
Bootstrap support for F7BF76 as seed ortholog is 55%.
Alternative seed ortholog is F6TFC4 (2 bits away from this cluster)
Bootstrap support for Q294G3 as seed ortholog is 100%.

Group of orthologs #3662. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 D.pseudoobscura:84

F6VWZ6              	100.00%		Q29IV1              	100.00%
Bootstrap support for F6VWZ6 as seed ortholog is 100%.
Bootstrap support for Q29IV1 as seed ortholog is 100%.

Group of orthologs #3663. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 D.pseudoobscura:84

H2XSS0              	100.00%		Q28ZZ7              	100.00%
Bootstrap support for H2XSS0 as seed ortholog is 100%.
Bootstrap support for Q28ZZ7 as seed ortholog is 100%.

Group of orthologs #3664. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 D.pseudoobscura:84

H2XRD0              	100.00%		Q29EQ2              	100.00%
Bootstrap support for H2XRD0 as seed ortholog is 100%.
Bootstrap support for Q29EQ2 as seed ortholog is 100%.

Group of orthologs #3665. Best score 84 bits
Score difference with first non-orthologous sequence - C.intestinalis:84 D.pseudoobscura:84

H2Y306              	100.00%		Q29II2              	100.00%
Bootstrap support for H2Y306 as seed ortholog is 100%.
Bootstrap support for Q29II2 as seed ortholog is 100%.

Group of orthologs #3666. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 D.pseudoobscura:83

F6YNB1              	100.00%		B5DP64              	100.00%
                    	       		Q29FB2              	100.00%
                    	       		Q29FB3              	25.73%
Bootstrap support for F6YNB1 as seed ortholog is 100%.
Bootstrap support for B5DP64 as seed ortholog is 100%.
Bootstrap support for Q29FB2 as seed ortholog is 100%.

Group of orthologs #3667. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 D.pseudoobscura:83

F7ATE8              	100.00%		B5DXN1              	100.00%
                    	       		Q294X5              	24.14%
                    	       		Q296N5              	19.70%
Bootstrap support for F7ATE8 as seed ortholog is 100%.
Bootstrap support for B5DXN1 as seed ortholog is 100%.

Group of orthologs #3668. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 D.pseudoobscura:83

F6W5A6              	100.00%		Q28Z92              	100.00%
                    	       		B5DQI5              	21.57%
Bootstrap support for F6W5A6 as seed ortholog is 100%.
Bootstrap support for Q28Z92 as seed ortholog is 100%.

Group of orthologs #3669. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:39 D.pseudoobscura:83

F6TX70              	100.00%		Q2LYI4              	100.00%
F6TX66              	70.55%		
Bootstrap support for F6TX70 as seed ortholog is 84%.
Bootstrap support for Q2LYI4 as seed ortholog is 100%.

Group of orthologs #3670. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 D.pseudoobscura:83

F6U2P7              	100.00%		B5DYM9              	100.00%
Bootstrap support for F6U2P7 as seed ortholog is 100%.
Bootstrap support for B5DYM9 as seed ortholog is 100%.

Group of orthologs #3671. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 D.pseudoobscura:83

F7AA36              	100.00%		Q295E1              	100.00%
Bootstrap support for F7AA36 as seed ortholog is 64%.
Alternative seed ortholog is H2XNJ6 (14 bits away from this cluster)
Bootstrap support for Q295E1 as seed ortholog is 100%.

Group of orthologs #3672. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 D.pseudoobscura:83

F7AD61              	100.00%		Q29G79              	100.00%
Bootstrap support for F7AD61 as seed ortholog is 100%.
Bootstrap support for Q29G79 as seed ortholog is 100%.

Group of orthologs #3673. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 D.pseudoobscura:83

H2XWF9              	100.00%		Q29IC5              	100.00%
Bootstrap support for H2XWF9 as seed ortholog is 100%.
Bootstrap support for Q29IC5 as seed ortholog is 100%.

Group of orthologs #3674. Best score 83 bits
Score difference with first non-orthologous sequence - C.intestinalis:83 D.pseudoobscura:83

H2Y076              	100.00%		Q29LZ0              	100.00%
Bootstrap support for H2Y076 as seed ortholog is 100%.
Bootstrap support for Q29LZ0 as seed ortholog is 100%.

Group of orthologs #3675. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 D.pseudoobscura:82

F6US70              	100.00%		Q299S2              	100.00%
F6QH26              	8.40%		
F6UUD7              	7.18%		
Bootstrap support for F6US70 as seed ortholog is 100%.
Bootstrap support for Q299S2 as seed ortholog is 100%.

Group of orthologs #3676. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 D.pseudoobscura:82

H2XW37              	100.00%		Q29L36              	100.00%
                    	       		Q29I95              	22.50%
                    	       		Q29I97              	12.62%
Bootstrap support for H2XW37 as seed ortholog is 100%.
Bootstrap support for Q29L36 as seed ortholog is 100%.

Group of orthologs #3677. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 D.pseudoobscura:82

F6R0Q7              	100.00%		Q29FF3              	100.00%
Bootstrap support for F6R0Q7 as seed ortholog is 100%.
Bootstrap support for Q29FF3 as seed ortholog is 100%.

Group of orthologs #3678. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 D.pseudoobscura:82

F6VD64              	100.00%		Q29FT7              	100.00%
Bootstrap support for F6VD64 as seed ortholog is 100%.
Bootstrap support for Q29FT7 as seed ortholog is 100%.

Group of orthologs #3679. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 D.pseudoobscura:82

F6WCS0              	100.00%		Q29FM4              	100.00%
Bootstrap support for F6WCS0 as seed ortholog is 100%.
Bootstrap support for Q29FM4 as seed ortholog is 100%.

Group of orthologs #3680. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 D.pseudoobscura:82

H2XWU8              	100.00%		B5DVK7              	100.00%
Bootstrap support for H2XWU8 as seed ortholog is 100%.
Bootstrap support for B5DVK7 as seed ortholog is 100%.

Group of orthologs #3681. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 D.pseudoobscura:82

F6VGF9              	100.00%		Q2LZ05              	100.00%
Bootstrap support for F6VGF9 as seed ortholog is 100%.
Bootstrap support for Q2LZ05 as seed ortholog is 100%.

Group of orthologs #3682. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 D.pseudoobscura:82

F7ADK7              	100.00%		Q29DQ7              	100.00%
Bootstrap support for F7ADK7 as seed ortholog is 100%.
Bootstrap support for Q29DQ7 as seed ortholog is 100%.

Group of orthologs #3683. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 D.pseudoobscura:82

F6XMY3              	100.00%		Q2LYS3              	100.00%
Bootstrap support for F6XMY3 as seed ortholog is 100%.
Bootstrap support for Q2LYS3 as seed ortholog is 100%.

Group of orthologs #3684. Best score 82 bits
Score difference with first non-orthologous sequence - C.intestinalis:82 D.pseudoobscura:82

H2XMF0              	100.00%		Q29KS3              	100.00%
Bootstrap support for H2XMF0 as seed ortholog is 100%.
Bootstrap support for Q29KS3 as seed ortholog is 100%.

Group of orthologs #3685. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:81

F6ZRL9              	100.00%		Q28XD4              	100.00%
F6SLU0              	8.91%		
F6S6P6              	8.72%		
Bootstrap support for F6ZRL9 as seed ortholog is 100%.
Bootstrap support for Q28XD4 as seed ortholog is 100%.

Group of orthologs #3686. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 D.pseudoobscura:81

F6UG00              	100.00%		B5DPK0              	100.00%
H2Y1T6              	18.53%		
Bootstrap support for F6UG00 as seed ortholog is 56%.
Alternative seed ortholog is F6VQ92 (5 bits away from this cluster)
Bootstrap support for B5DPK0 as seed ortholog is 100%.

Group of orthologs #3687. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:36

F6THA9              	100.00%		Q29B65              	100.00%
                    	       		B5DPT0              	12.18%
Bootstrap support for F6THA9 as seed ortholog is 100%.
Bootstrap support for Q29B65 as seed ortholog is 97%.

Group of orthologs #3688. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:81

H2XRK7              	100.00%		Q29K35              	100.00%
                    	       		Q29K36              	56.10%
Bootstrap support for H2XRK7 as seed ortholog is 100%.
Bootstrap support for Q29K35 as seed ortholog is 100%.

Group of orthologs #3689. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:81

F6Q2S6              	100.00%		Q28XV9              	100.00%
Bootstrap support for F6Q2S6 as seed ortholog is 100%.
Bootstrap support for Q28XV9 as seed ortholog is 100%.

Group of orthologs #3690. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:81

F6WZ37              	100.00%		Q28ZZ5              	100.00%
Bootstrap support for F6WZ37 as seed ortholog is 100%.
Bootstrap support for Q28ZZ5 as seed ortholog is 100%.

Group of orthologs #3691. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:81

F6QFG5              	100.00%		Q29L93              	100.00%
Bootstrap support for F6QFG5 as seed ortholog is 100%.
Bootstrap support for Q29L93 as seed ortholog is 100%.

Group of orthologs #3692. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:81

F6Y4Z5              	100.00%		Q29F11              	100.00%
Bootstrap support for F6Y4Z5 as seed ortholog is 100%.
Bootstrap support for Q29F11 as seed ortholog is 100%.

Group of orthologs #3693. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 D.pseudoobscura:81

F6UZD3              	100.00%		Q29N62              	100.00%
Bootstrap support for F6UZD3 as seed ortholog is 66%.
Alternative seed ortholog is F6ZW77 (16 bits away from this cluster)
Bootstrap support for Q29N62 as seed ortholog is 100%.

Group of orthologs #3694. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:81

F6YTC9              	100.00%		Q29FQ8              	100.00%
Bootstrap support for F6YTC9 as seed ortholog is 100%.
Bootstrap support for Q29FQ8 as seed ortholog is 100%.

Group of orthologs #3695. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:27

F7BEX9              	100.00%		Q29AQ6              	100.00%
Bootstrap support for F7BEX9 as seed ortholog is 100%.
Bootstrap support for Q29AQ6 as seed ortholog is 76%.

Group of orthologs #3696. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:81

F6WZA5              	100.00%		Q2M017              	100.00%
Bootstrap support for F6WZA5 as seed ortholog is 100%.
Bootstrap support for Q2M017 as seed ortholog is 100%.

Group of orthologs #3697. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:14 D.pseudoobscura:81

H2Y0G1              	100.00%		Q28YX1              	100.00%
Bootstrap support for H2Y0G1 as seed ortholog is 62%.
Alternative seed ortholog is Q4H2Q1 (14 bits away from this cluster)
Bootstrap support for Q28YX1 as seed ortholog is 100%.

Group of orthologs #3698. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:81

Q4H3D9              	100.00%		Q28X13              	100.00%
Bootstrap support for Q4H3D9 as seed ortholog is 100%.
Bootstrap support for Q28X13 as seed ortholog is 100%.

Group of orthologs #3699. Best score 81 bits
Score difference with first non-orthologous sequence - C.intestinalis:81 D.pseudoobscura:81

H2Y104              	100.00%		Q29NI1              	100.00%
Bootstrap support for H2Y104 as seed ortholog is 100%.
Bootstrap support for Q29NI1 as seed ortholog is 100%.

Group of orthologs #3700. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:34 D.pseudoobscura:80

F6X0B6              	100.00%		B5E0E2              	100.00%
F7A515              	9.09%		
F6VHJ0              	6.12%		
Bootstrap support for F6X0B6 as seed ortholog is 81%.
Bootstrap support for B5E0E2 as seed ortholog is 100%.

Group of orthologs #3701. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 D.pseudoobscura:80

H2XWL2              	100.00%		Q294K4              	100.00%
                    	       		B5DWH6              	32.80%
Bootstrap support for H2XWL2 as seed ortholog is 100%.
Bootstrap support for Q294K4 as seed ortholog is 100%.

Group of orthologs #3702. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 D.pseudoobscura:80

F7AB27              	100.00%		Q29HH8              	100.00%
Bootstrap support for F7AB27 as seed ortholog is 100%.
Bootstrap support for Q29HH8 as seed ortholog is 100%.

Group of orthologs #3703. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 D.pseudoobscura:80

H2XU50              	100.00%		Q29H86              	100.00%
Bootstrap support for H2XU50 as seed ortholog is 100%.
Bootstrap support for Q29H86 as seed ortholog is 100%.

Group of orthologs #3704. Best score 80 bits
Score difference with first non-orthologous sequence - C.intestinalis:80 D.pseudoobscura:80

H2XML9              	100.00%		Q2M0K2              	100.00%
Bootstrap support for H2XML9 as seed ortholog is 100%.
Bootstrap support for Q2M0K2 as seed ortholog is 100%.

Group of orthologs #3705. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 D.pseudoobscura:79

F7ABX1              	100.00%		Q28XD1              	100.00%
                    	       		Q28WX1              	22.78%
Bootstrap support for F7ABX1 as seed ortholog is 100%.
Bootstrap support for Q28XD1 as seed ortholog is 100%.

Group of orthologs #3706. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 D.pseudoobscura:8

H2XLR4              	100.00%		Q2LYL0              	100.00%
                    	       		Q29D57              	10.74%
Bootstrap support for H2XLR4 as seed ortholog is 100%.
Bootstrap support for Q2LYL0 as seed ortholog is 66%.
Alternative seed ortholog is Q29D72 (8 bits away from this cluster)

Group of orthologs #3707. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 D.pseudoobscura:79

H2XYX4              	100.00%		Q29L04              	100.00%
F6ZTU7              	5.91%		
Bootstrap support for H2XYX4 as seed ortholog is 100%.
Bootstrap support for Q29L04 as seed ortholog is 100%.

Group of orthologs #3708. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:20 D.pseudoobscura:79

F6QMN2              	100.00%		B5DMH5              	100.00%
Bootstrap support for F6QMN2 as seed ortholog is 87%.
Bootstrap support for B5DMH5 as seed ortholog is 100%.

Group of orthologs #3709. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:79 D.pseudoobscura:79

F7AAF9              	100.00%		Q29C84              	100.00%
Bootstrap support for F7AAF9 as seed ortholog is 100%.
Bootstrap support for Q29C84 as seed ortholog is 100%.

Group of orthologs #3710. Best score 79 bits
Score difference with first non-orthologous sequence - C.intestinalis:30 D.pseudoobscura:79

F6XT02              	100.00%		Q2M0N0              	100.00%
Bootstrap support for F6XT02 as seed ortholog is 94%.
Bootstrap support for Q2M0N0 as seed ortholog is 100%.

Group of orthologs #3711. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 D.pseudoobscura:28

H2XQB8              	100.00%		B5DSX8              	100.00%
                    	       		B5DT12              	71.81%
                    	       		B5DT11              	64.71%
                    	       		B5DSA0              	36.76%
                    	       		B5DSV4              	30.15%
                    	       		B5DTB5              	16.42%
                    	       		B5DSY5              	15.20%
                    	       		B5DT60              	13.73%
                    	       		B5DU32              	13.73%
                    	       		B5DUZ1              	13.48%
                    	       		B5DT92              	12.50%
Bootstrap support for H2XQB8 as seed ortholog is 100%.
Bootstrap support for B5DSX8 as seed ortholog is 92%.

Group of orthologs #3712. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 D.pseudoobscura:78

H2Y1M2              	100.00%		B5DQS2              	100.00%
F6QL68              	9.63%		
H2XQT4              	8.71%		
Bootstrap support for H2Y1M2 as seed ortholog is 100%.
Bootstrap support for B5DQS2 as seed ortholog is 100%.

Group of orthologs #3713. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 D.pseudoobscura:78

H2XL08              	100.00%		Q299D6              	100.00%
Bootstrap support for H2XL08 as seed ortholog is 100%.
Bootstrap support for Q299D6 as seed ortholog is 100%.

Group of orthologs #3714. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 D.pseudoobscura:78

H2XP14              	100.00%		Q2M0M3              	100.00%
Bootstrap support for H2XP14 as seed ortholog is 100%.
Bootstrap support for Q2M0M3 as seed ortholog is 100%.

Group of orthologs #3715. Best score 78 bits
Score difference with first non-orthologous sequence - C.intestinalis:78 D.pseudoobscura:78

Q8MXX3              	100.00%		Q2LZM7              	100.00%
Bootstrap support for Q8MXX3 as seed ortholog is 100%.
Bootstrap support for Q2LZM7 as seed ortholog is 100%.

Group of orthologs #3716. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 D.pseudoobscura:77

F6ZGB0              	100.00%		B5DP70              	100.00%
                    	       		Q299V5              	37.33%
Bootstrap support for F6ZGB0 as seed ortholog is 100%.
Bootstrap support for B5DP70 as seed ortholog is 100%.

Group of orthologs #3717. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 D.pseudoobscura:9

F6PHF4              	100.00%		Q296S1              	100.00%
Bootstrap support for F6PHF4 as seed ortholog is 100%.
Bootstrap support for Q296S1 as seed ortholog is 56%.
Alternative seed ortholog is B5DU18 (9 bits away from this cluster)

Group of orthologs #3718. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 D.pseudoobscura:77

F7ALL0              	100.00%		B5DQY1              	100.00%
Bootstrap support for F7ALL0 as seed ortholog is 100%.
Bootstrap support for B5DQY1 as seed ortholog is 100%.

Group of orthologs #3719. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 D.pseudoobscura:77

F6R6V8              	100.00%		Q2LZS7              	100.00%
Bootstrap support for F6R6V8 as seed ortholog is 100%.
Bootstrap support for Q2LZS7 as seed ortholog is 100%.

Group of orthologs #3720. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 D.pseudoobscura:77

F6ZJ92              	100.00%		Q295W2              	100.00%
Bootstrap support for F6ZJ92 as seed ortholog is 100%.
Bootstrap support for Q295W2 as seed ortholog is 100%.

Group of orthologs #3721. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 D.pseudoobscura:77

F6YWD0              	100.00%		Q29PP1              	100.00%
Bootstrap support for F6YWD0 as seed ortholog is 100%.
Bootstrap support for Q29PP1 as seed ortholog is 100%.

Group of orthologs #3722. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 D.pseudoobscura:77

H2XUZ6              	100.00%		Q295E3              	100.00%
Bootstrap support for H2XUZ6 as seed ortholog is 100%.
Bootstrap support for Q295E3 as seed ortholog is 100%.

Group of orthologs #3723. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 D.pseudoobscura:77

H2XKN7              	100.00%		Q29MC3              	100.00%
Bootstrap support for H2XKN7 as seed ortholog is 100%.
Bootstrap support for Q29MC3 as seed ortholog is 100%.

Group of orthologs #3724. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 D.pseudoobscura:10

H2XVD4              	100.00%		Q29DK8              	100.00%
Bootstrap support for H2XVD4 as seed ortholog is 100%.
Bootstrap support for Q29DK8 as seed ortholog is 54%.
Alternative seed ortholog is Q291P9 (10 bits away from this cluster)

Group of orthologs #3725. Best score 77 bits
Score difference with first non-orthologous sequence - C.intestinalis:77 D.pseudoobscura:77

H2XN70              	100.00%		Q2M117              	100.00%
Bootstrap support for H2XN70 as seed ortholog is 100%.
Bootstrap support for Q2M117 as seed ortholog is 100%.

Group of orthologs #3726. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 D.pseudoobscura:76

F6YPP1              	100.00%		Q29PJ8              	100.00%
F6W4U6              	27.81%		B5DH62              	25.11%
F6W4U0              	26.47%		Q29NG5              	15.25%
F6V9R6              	15.78%		Q29GW4              	12.11%
                    	       		Q297X8              	10.76%
                    	       		Q29GW5              	6.28%
Bootstrap support for F6YPP1 as seed ortholog is 100%.
Bootstrap support for Q29PJ8 as seed ortholog is 100%.

Group of orthologs #3727. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 D.pseudoobscura:76

H2XPZ5              	100.00%		B5DKN9              	100.00%
                    	       		B5DUB6              	75.90%
                    	       		B5DH91              	8.43%
Bootstrap support for H2XPZ5 as seed ortholog is 100%.
Bootstrap support for B5DKN9 as seed ortholog is 100%.

Group of orthologs #3728. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 D.pseudoobscura:76

H2XQH9              	100.00%		B5DMC7              	100.00%
                    	       		B5DJ05              	6.27%
Bootstrap support for H2XQH9 as seed ortholog is 100%.
Bootstrap support for B5DMC7 as seed ortholog is 100%.

Group of orthologs #3729. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 D.pseudoobscura:76

F6U6F4              	100.00%		B5DR51              	100.00%
Bootstrap support for F6U6F4 as seed ortholog is 100%.
Bootstrap support for B5DR51 as seed ortholog is 100%.

Group of orthologs #3730. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 D.pseudoobscura:76

F6YHV1              	100.00%		B5E0K8              	100.00%
Bootstrap support for F6YHV1 as seed ortholog is 100%.
Bootstrap support for B5E0K8 as seed ortholog is 100%.

Group of orthologs #3731. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 D.pseudoobscura:76

H2XRY4              	100.00%		B5DME1              	100.00%
Bootstrap support for H2XRY4 as seed ortholog is 100%.
Bootstrap support for B5DME1 as seed ortholog is 100%.

Group of orthologs #3732. Best score 76 bits
Score difference with first non-orthologous sequence - C.intestinalis:76 D.pseudoobscura:76

F7BK53              	100.00%		Q297R8              	100.00%
Bootstrap support for F7BK53 as seed ortholog is 100%.
Bootstrap support for Q297R8 as seed ortholog is 100%.

Group of orthologs #3733. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 D.pseudoobscura:0

F6X4P6              	100.00%		Q294Q3              	100.00%
F6YAG6              	12.98%		
H2XWX6              	7.87%		
Bootstrap support for F6X4P6 as seed ortholog is 100%.
Bootstrap support for Q294Q3 as seed ortholog is 49%.
Alternative seed ortholog is B5DLX5 (0 bits away from this cluster)

Group of orthologs #3734. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 D.pseudoobscura:75

H2Y167              	100.00%		Q29DX6              	100.00%
                    	       		B5DIG4              	35.65%
Bootstrap support for H2Y167 as seed ortholog is 100%.
Bootstrap support for Q29DX6 as seed ortholog is 100%.

Group of orthologs #3735. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 D.pseudoobscura:75

H2XNL6              	100.00%		B5DKJ0              	100.00%
Bootstrap support for H2XNL6 as seed ortholog is 100%.
Bootstrap support for B5DKJ0 as seed ortholog is 100%.

Group of orthologs #3736. Best score 75 bits
Score difference with first non-orthologous sequence - C.intestinalis:75 D.pseudoobscura:75

F6VB34              	100.00%		Q29F65              	100.00%
Bootstrap support for F6VB34 as seed ortholog is 100%.
Bootstrap support for Q29F65 as seed ortholog is 100%.

Group of orthologs #3737. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 D.pseudoobscura:74

F6ZS78              	100.00%		B5DNT2              	100.00%
Bootstrap support for F6ZS78 as seed ortholog is 100%.
Bootstrap support for B5DNT2 as seed ortholog is 100%.

Group of orthologs #3738. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 D.pseudoobscura:74

F7BGB4              	100.00%		B5DJR3              	100.00%
Bootstrap support for F7BGB4 as seed ortholog is 100%.
Bootstrap support for B5DJR3 as seed ortholog is 100%.

Group of orthologs #3739. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 D.pseudoobscura:74

F6RW32              	100.00%		Q295X5              	100.00%
Bootstrap support for F6RW32 as seed ortholog is 100%.
Bootstrap support for Q295X5 as seed ortholog is 100%.

Group of orthologs #3740. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 D.pseudoobscura:74

F6ZUZ2              	100.00%		Q28XG6              	100.00%
Bootstrap support for F6ZUZ2 as seed ortholog is 100%.
Bootstrap support for Q28XG6 as seed ortholog is 100%.

Group of orthologs #3741. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 D.pseudoobscura:74

F7ANT6              	100.00%		Q295B6              	100.00%
Bootstrap support for F7ANT6 as seed ortholog is 100%.
Bootstrap support for Q295B6 as seed ortholog is 100%.

Group of orthologs #3742. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 D.pseudoobscura:74

H2XPR4              	100.00%		Q28Y93              	100.00%
Bootstrap support for H2XPR4 as seed ortholog is 100%.
Bootstrap support for Q28Y93 as seed ortholog is 100%.

Group of orthologs #3743. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 D.pseudoobscura:74

H2XRA3              	100.00%		Q28Z05              	100.00%
Bootstrap support for H2XRA3 as seed ortholog is 100%.
Bootstrap support for Q28Z05 as seed ortholog is 100%.

Group of orthologs #3744. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:22 D.pseudoobscura:12

F6YHK2              	100.00%		Q29N43              	100.00%
Bootstrap support for F6YHK2 as seed ortholog is 78%.
Bootstrap support for Q29N43 as seed ortholog is 63%.
Alternative seed ortholog is Q29CQ9 (12 bits away from this cluster)

Group of orthologs #3745. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 D.pseudoobscura:74

F7BC32              	100.00%		Q29II4              	100.00%
Bootstrap support for F7BC32 as seed ortholog is 100%.
Bootstrap support for Q29II4 as seed ortholog is 100%.

Group of orthologs #3746. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 D.pseudoobscura:74

H2XRN2              	100.00%		Q29LV5              	100.00%
Bootstrap support for H2XRN2 as seed ortholog is 100%.
Bootstrap support for Q29LV5 as seed ortholog is 100%.

Group of orthologs #3747. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 D.pseudoobscura:74

H2XXK2              	100.00%		Q2M098              	100.00%
Bootstrap support for H2XXK2 as seed ortholog is 100%.
Bootstrap support for Q2M098 as seed ortholog is 100%.

Group of orthologs #3748. Best score 74 bits
Score difference with first non-orthologous sequence - C.intestinalis:74 D.pseudoobscura:21

H2Y2G4              	100.00%		Q29NA2              	100.00%
Bootstrap support for H2Y2G4 as seed ortholog is 100%.
Bootstrap support for Q29NA2 as seed ortholog is 62%.
Alternative seed ortholog is Q290N3 (21 bits away from this cluster)

Group of orthologs #3749. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 D.pseudoobscura:73

F6QL93              	100.00%		Q296Y2              	100.00%
                    	       		Q296Y1              	34.26%
                    	       		Q296Y6              	28.70%
                    	       		Q296Y0              	19.44%
Bootstrap support for F6QL93 as seed ortholog is 100%.
Bootstrap support for Q296Y2 as seed ortholog is 100%.

Group of orthologs #3750. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 D.pseudoobscura:73

F6TBA1              	100.00%		B5DJ62              	100.00%
Bootstrap support for F6TBA1 as seed ortholog is 100%.
Bootstrap support for B5DJ62 as seed ortholog is 100%.

Group of orthologs #3751. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 D.pseudoobscura:73

F6SS40              	100.00%		B5DTE4              	100.00%
Bootstrap support for F6SS40 as seed ortholog is 100%.
Bootstrap support for B5DTE4 as seed ortholog is 100%.

Group of orthologs #3752. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 D.pseudoobscura:14

F6PTL1              	100.00%		Q29BY3              	100.00%
Bootstrap support for F6PTL1 as seed ortholog is 63%.
Alternative seed ortholog is F6V014 (9 bits away from this cluster)
Bootstrap support for Q29BY3 as seed ortholog is 69%.
Alternative seed ortholog is Q29KB6 (14 bits away from this cluster)

Group of orthologs #3753. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 D.pseudoobscura:73

F6ZL23              	100.00%		Q297K8              	100.00%
Bootstrap support for F6ZL23 as seed ortholog is 100%.
Bootstrap support for Q297K8 as seed ortholog is 100%.

Group of orthologs #3754. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 D.pseudoobscura:73

H2XL09              	100.00%		Q2M0M8              	100.00%
Bootstrap support for H2XL09 as seed ortholog is 100%.
Bootstrap support for Q2M0M8 as seed ortholog is 100%.

Group of orthologs #3755. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 D.pseudoobscura:73

H2XXZ8              	100.00%		Q29IM5              	100.00%
Bootstrap support for H2XXZ8 as seed ortholog is 100%.
Bootstrap support for Q29IM5 as seed ortholog is 100%.

Group of orthologs #3756. Best score 73 bits
Score difference with first non-orthologous sequence - C.intestinalis:73 D.pseudoobscura:73

H2Y2G8              	100.00%		Q29MT5              	100.00%
Bootstrap support for H2Y2G8 as seed ortholog is 100%.
Bootstrap support for Q29MT5 as seed ortholog is 100%.

Group of orthologs #3757. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 D.pseudoobscura:72

F7AYH7              	100.00%		B5E0A8              	100.00%
                    	       		B5DKA8              	88.41%
                    	       		Q29JS3              	24.39%
Bootstrap support for F7AYH7 as seed ortholog is 100%.
Bootstrap support for B5E0A8 as seed ortholog is 100%.

Group of orthologs #3758. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 D.pseudoobscura:72

H2XPU3              	100.00%		Q299Z3              	100.00%
                    	       		Q299Z4              	24.27%
                    	       		Q298F2              	6.28%
Bootstrap support for H2XPU3 as seed ortholog is 100%.
Bootstrap support for Q299Z3 as seed ortholog is 100%.

Group of orthologs #3759. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 D.pseudoobscura:72

H2XZ90              	100.00%		Q2LZW9              	100.00%
                    	       		B5DMY9              	10.08%
                    	       		Q29HF7              	9.30%
Bootstrap support for H2XZ90 as seed ortholog is 100%.
Bootstrap support for Q2LZW9 as seed ortholog is 100%.

Group of orthologs #3760. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 D.pseudoobscura:72

F6UGG0              	100.00%		Q29JD0              	100.00%
Bootstrap support for F6UGG0 as seed ortholog is 100%.
Bootstrap support for Q29JD0 as seed ortholog is 100%.

Group of orthologs #3761. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 D.pseudoobscura:72

F6XW35              	100.00%		Q29PN7              	100.00%
Bootstrap support for F6XW35 as seed ortholog is 100%.
Bootstrap support for Q29PN7 as seed ortholog is 100%.

Group of orthologs #3762. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 D.pseudoobscura:72

H2Y1V8              	100.00%		Q29DA6              	100.00%
Bootstrap support for H2Y1V8 as seed ortholog is 100%.
Bootstrap support for Q29DA6 as seed ortholog is 100%.

Group of orthologs #3763. Best score 72 bits
Score difference with first non-orthologous sequence - C.intestinalis:72 D.pseudoobscura:72

H2Y196              	100.00%		Q2LYW1              	100.00%
Bootstrap support for H2Y196 as seed ortholog is 100%.
Bootstrap support for Q2LYW1 as seed ortholog is 100%.

Group of orthologs #3764. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 D.pseudoobscura:2

H2XPD5              	100.00%		B5DUP2              	100.00%
                    	       		B5DWK9              	100.00%
Bootstrap support for H2XPD5 as seed ortholog is 100%.
Bootstrap support for B5DUP2 as seed ortholog is 47%.
Alternative seed ortholog is Q297J0 (2 bits away from this cluster)
Bootstrap support for B5DWK9 as seed ortholog is 46%.
Alternative seed ortholog is Q297J0 (2 bits away from this cluster)

Group of orthologs #3765. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 D.pseudoobscura:71

F6TXQ6              	100.00%		Q29J54              	100.00%
F6V198              	36.13%		
Bootstrap support for F6TXQ6 as seed ortholog is 100%.
Bootstrap support for Q29J54 as seed ortholog is 100%.

Group of orthologs #3766. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 D.pseudoobscura:71

F6VGW8              	100.00%		Q28Y95              	100.00%
Bootstrap support for F6VGW8 as seed ortholog is 100%.
Bootstrap support for Q28Y95 as seed ortholog is 100%.

Group of orthologs #3767. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 D.pseudoobscura:71

F6VEI9              	100.00%		Q28ZP3              	100.00%
Bootstrap support for F6VEI9 as seed ortholog is 100%.
Bootstrap support for Q28ZP3 as seed ortholog is 100%.

Group of orthologs #3768. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 D.pseudoobscura:71

F6SKV4              	100.00%		Q29BR4              	100.00%
Bootstrap support for F6SKV4 as seed ortholog is 100%.
Bootstrap support for Q29BR4 as seed ortholog is 100%.

Group of orthologs #3769. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 D.pseudoobscura:71

F6PHD5              	100.00%		Q29NV5              	100.00%
Bootstrap support for F6PHD5 as seed ortholog is 100%.
Bootstrap support for Q29NV5 as seed ortholog is 100%.

Group of orthologs #3770. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 D.pseudoobscura:71

F6Y9P8              	100.00%		Q29F39              	100.00%
Bootstrap support for F6Y9P8 as seed ortholog is 100%.
Bootstrap support for Q29F39 as seed ortholog is 100%.

Group of orthologs #3771. Best score 71 bits
Score difference with first non-orthologous sequence - C.intestinalis:71 D.pseudoobscura:71

H2XTV9              	100.00%		Q2LZ37              	100.00%
Bootstrap support for H2XTV9 as seed ortholog is 100%.
Bootstrap support for Q2LZ37 as seed ortholog is 100%.

Group of orthologs #3772. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:70

F6V951              	100.00%		Q29JS1              	100.00%
F6XPY9              	100.00%		Q29P55              	100.00%
                    	       		B5DKA9              	68.71%
Bootstrap support for F6V951 as seed ortholog is 100%.
Bootstrap support for F6XPY9 as seed ortholog is 100%.
Bootstrap support for Q29JS1 as seed ortholog is 100%.
Bootstrap support for Q29P55 as seed ortholog is 100%.

Group of orthologs #3773. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:4

F7ALW9              	100.00%		Q293A3              	100.00%
F6Y965              	14.74%		
Bootstrap support for F7ALW9 as seed ortholog is 100%.
Bootstrap support for Q293A3 as seed ortholog is 50%.
Alternative seed ortholog is B5DWW3 (4 bits away from this cluster)

Group of orthologs #3774. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:70

H2XZR9              	100.00%		B5DWS8              	100.00%
                    	       		Q29K95              	17.53%
Bootstrap support for H2XZR9 as seed ortholog is 100%.
Bootstrap support for B5DWS8 as seed ortholog is 100%.

Group of orthologs #3775. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:11

H2XWM7              	100.00%		B5DL92              	100.00%
Bootstrap support for H2XWM7 as seed ortholog is 100%.
Bootstrap support for B5DL92 as seed ortholog is 76%.

Group of orthologs #3776. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:70

F6X972              	100.00%		Q29AJ9              	100.00%
Bootstrap support for F6X972 as seed ortholog is 100%.
Bootstrap support for Q29AJ9 as seed ortholog is 100%.

Group of orthologs #3777. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:70

H2Y0Q7              	100.00%		B5DLV9              	100.00%
Bootstrap support for H2Y0Q7 as seed ortholog is 100%.
Bootstrap support for B5DLV9 as seed ortholog is 100%.

Group of orthologs #3778. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:70

H2XKD8              	100.00%		Q291V2              	100.00%
Bootstrap support for H2XKD8 as seed ortholog is 100%.
Bootstrap support for Q291V2 as seed ortholog is 100%.

Group of orthologs #3779. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:70

F6ZFU8              	100.00%		Q29K79              	100.00%
Bootstrap support for F6ZFU8 as seed ortholog is 100%.
Bootstrap support for Q29K79 as seed ortholog is 100%.

Group of orthologs #3780. Best score 70 bits
Score difference with first non-orthologous sequence - C.intestinalis:70 D.pseudoobscura:70

H2XT55              	100.00%		Q29ID6              	100.00%
Bootstrap support for H2XT55 as seed ortholog is 100%.
Bootstrap support for Q29ID6 as seed ortholog is 100%.

Group of orthologs #3781. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 D.pseudoobscura:6

F6WAE5              	100.00%		Q299J8              	100.00%
                    	       		B5DYA9              	10.61%
                    	       		B5DTB2              	10.26%
                    	       		B5DT15              	10.09%
Bootstrap support for F6WAE5 as seed ortholog is 100%.
Bootstrap support for Q299J8 as seed ortholog is 67%.
Alternative seed ortholog is B5DU88 (6 bits away from this cluster)

Group of orthologs #3782. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:24 D.pseudoobscura:69

F6SU68              	100.00%		B5DVX8              	100.00%
F6U4M6              	13.30%		
Bootstrap support for F6SU68 as seed ortholog is 89%.
Bootstrap support for B5DVX8 as seed ortholog is 100%.

Group of orthologs #3783. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 D.pseudoobscura:69

H2XQL0              	100.00%		B5E0W0              	100.00%
                    	       		Q28WM7              	11.81%
Bootstrap support for H2XQL0 as seed ortholog is 100%.
Bootstrap support for B5E0W0 as seed ortholog is 100%.

Group of orthologs #3784. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 D.pseudoobscura:69

F6QA01              	100.00%		Q292W6              	100.00%
Bootstrap support for F6QA01 as seed ortholog is 100%.
Bootstrap support for Q292W6 as seed ortholog is 100%.

Group of orthologs #3785. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 D.pseudoobscura:69

F6TCG6              	100.00%		Q293T9              	100.00%
Bootstrap support for F6TCG6 as seed ortholog is 100%.
Bootstrap support for Q293T9 as seed ortholog is 100%.

Group of orthologs #3786. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 D.pseudoobscura:69

F7BC02              	100.00%		B5E007              	100.00%
Bootstrap support for F7BC02 as seed ortholog is 100%.
Bootstrap support for B5E007 as seed ortholog is 100%.

Group of orthologs #3787. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 D.pseudoobscura:69

F6URQ1              	100.00%		Q29EQ7              	100.00%
Bootstrap support for F6URQ1 as seed ortholog is 100%.
Bootstrap support for Q29EQ7 as seed ortholog is 100%.

Group of orthologs #3788. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 D.pseudoobscura:69

H2XJJ4              	100.00%		Q29F74              	100.00%
Bootstrap support for H2XJJ4 as seed ortholog is 100%.
Bootstrap support for Q29F74 as seed ortholog is 100%.

Group of orthologs #3789. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 D.pseudoobscura:69

H2XMT5              	100.00%		Q2LZI3              	100.00%
Bootstrap support for H2XMT5 as seed ortholog is 100%.
Bootstrap support for Q2LZI3 as seed ortholog is 100%.

Group of orthologs #3790. Best score 69 bits
Score difference with first non-orthologous sequence - C.intestinalis:69 D.pseudoobscura:69

Q8T885              	100.00%		Q29FL2              	100.00%
Bootstrap support for Q8T885 as seed ortholog is 100%.
Bootstrap support for Q29FL2 as seed ortholog is 100%.

Group of orthologs #3791. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 D.pseudoobscura:68

F6QXJ4              	100.00%		Q28WW9              	100.00%
Bootstrap support for F6QXJ4 as seed ortholog is 100%.
Bootstrap support for Q28WW9 as seed ortholog is 100%.

Group of orthologs #3792. Best score 68 bits
Score difference with first non-orthologous sequence - C.intestinalis:68 D.pseudoobscura:68

F6PV21              	100.00%		Q298S5              	100.00%
Bootstrap support for F6PV21 as seed ortholog is 100%.
Bootstrap support for Q298S5 as seed ortholog is 100%.

Group of orthologs #3793. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 D.pseudoobscura:2

Q4H3C6              	100.00%		Q28ZR8              	100.00%
F6TGT7              	7.21%		Q29N35              	6.99%
                    	       		B5DM45              	6.87%
Bootstrap support for Q4H3C6 as seed ortholog is 100%.
Bootstrap support for Q28ZR8 as seed ortholog is 41%.
Alternative seed ortholog is Q28Z29 (2 bits away from this cluster)

Group of orthologs #3794. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 D.pseudoobscura:67

Q4H3D0              	100.00%		B5DWG2              	100.00%
                    	       		Q296U7              	9.12%
                    	       		B5DXF1              	7.49%
Bootstrap support for Q4H3D0 as seed ortholog is 100%.
Bootstrap support for B5DWG2 as seed ortholog is 100%.

Group of orthologs #3795. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 D.pseudoobscura:67

H2Y023              	100.00%		B5E0W8              	100.00%
H2XTM4              	49.59%		
Bootstrap support for H2Y023 as seed ortholog is 100%.
Bootstrap support for B5E0W8 as seed ortholog is 100%.

Group of orthologs #3796. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 D.pseudoobscura:67

F6QIW3              	100.00%		B5DLV7              	100.00%
Bootstrap support for F6QIW3 as seed ortholog is 100%.
Bootstrap support for B5DLV7 as seed ortholog is 100%.

Group of orthologs #3797. Best score 67 bits
Score difference with first non-orthologous sequence - C.intestinalis:67 D.pseudoobscura:67

F7BE19              	100.00%		Q29HZ9              	100.00%
Bootstrap support for F7BE19 as seed ortholog is 100%.
Bootstrap support for Q29HZ9 as seed ortholog is 100%.

Group of orthologs #3798. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 D.pseudoobscura:5

F6QRK3              	100.00%		Q296Z0              	100.00%
                    	       		Q296Z1              	15.07%
                    	       		Q296Y8              	11.30%
Bootstrap support for F6QRK3 as seed ortholog is 100%.
Bootstrap support for Q296Z0 as seed ortholog is 43%.
Alternative seed ortholog is Q29G34 (5 bits away from this cluster)

Group of orthologs #3799. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 D.pseudoobscura:66

F7AGE4              	100.00%		Q29LX4              	100.00%
                    	       		B5DHW6              	5.29%
Bootstrap support for F7AGE4 as seed ortholog is 100%.
Bootstrap support for Q29LX4 as seed ortholog is 100%.

Group of orthologs #3800. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:10 D.pseudoobscura:66

H2XV30              	100.00%		Q29H35              	100.00%
F6RRQ4              	34.81%		
Bootstrap support for H2XV30 as seed ortholog is 60%.
Alternative seed ortholog is H2XS09 (10 bits away from this cluster)
Bootstrap support for Q29H35 as seed ortholog is 100%.

Group of orthologs #3801. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:5 D.pseudoobscura:66

F7BLR9              	100.00%		Q293K4              	100.00%
Bootstrap support for F7BLR9 as seed ortholog is 68%.
Alternative seed ortholog is Q4H3M8 (5 bits away from this cluster)
Bootstrap support for Q293K4 as seed ortholog is 100%.

Group of orthologs #3802. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 D.pseudoobscura:66

H2XZ00              	100.00%		Q28YN0              	100.00%
Bootstrap support for H2XZ00 as seed ortholog is 100%.
Bootstrap support for Q28YN0 as seed ortholog is 100%.

Group of orthologs #3803. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 D.pseudoobscura:66

F6YW46              	100.00%		Q2M0U6              	100.00%
Bootstrap support for F6YW46 as seed ortholog is 100%.
Bootstrap support for Q2M0U6 as seed ortholog is 100%.

Group of orthologs #3804. Best score 66 bits
Score difference with first non-orthologous sequence - C.intestinalis:66 D.pseudoobscura:66

F7BLF3              	100.00%		Q29MS9              	100.00%
Bootstrap support for F7BLF3 as seed ortholog is 100%.
Bootstrap support for Q29MS9 as seed ortholog is 100%.

Group of orthologs #3805. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 D.pseudoobscura:65

F6YWN2              	100.00%		Q29JM2              	100.00%
                    	       		Q29F22              	11.03%
Bootstrap support for F6YWN2 as seed ortholog is 100%.
Bootstrap support for Q29JM2 as seed ortholog is 100%.

Group of orthologs #3806. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 D.pseudoobscura:65

F6PMB4              	100.00%		Q294R8              	100.00%
Bootstrap support for F6PMB4 as seed ortholog is 100%.
Bootstrap support for Q294R8 as seed ortholog is 100%.

Group of orthologs #3807. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 D.pseudoobscura:65

F6X1A2              	100.00%		P91699              	100.00%
Bootstrap support for F6X1A2 as seed ortholog is 100%.
Bootstrap support for P91699 as seed ortholog is 100%.

Group of orthologs #3808. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 D.pseudoobscura:65

F6WHY6              	100.00%		Q28Z35              	100.00%
Bootstrap support for F6WHY6 as seed ortholog is 100%.
Bootstrap support for Q28Z35 as seed ortholog is 100%.

Group of orthologs #3809. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 D.pseudoobscura:65

F7AM14              	100.00%		Q29BR2              	100.00%
Bootstrap support for F7AM14 as seed ortholog is 100%.
Bootstrap support for Q29BR2 as seed ortholog is 100%.

Group of orthologs #3810. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 D.pseudoobscura:65

F7BCU9              	100.00%		Q29AT9              	100.00%
Bootstrap support for F7BCU9 as seed ortholog is 100%.
Bootstrap support for Q29AT9 as seed ortholog is 100%.

Group of orthologs #3811. Best score 65 bits
Score difference with first non-orthologous sequence - C.intestinalis:65 D.pseudoobscura:65

F6XU26              	100.00%		Q29LG4              	100.00%
Bootstrap support for F6XU26 as seed ortholog is 100%.
Bootstrap support for Q29LG4 as seed ortholog is 100%.

Group of orthologs #3812. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 D.pseudoobscura:64

H2XK36              	100.00%		B5DVT8              	100.00%
                    	       		Q29C70              	10.55%
Bootstrap support for H2XK36 as seed ortholog is 100%.
Bootstrap support for B5DVT8 as seed ortholog is 100%.

Group of orthologs #3813. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 D.pseudoobscura:64

F6RDQ7              	100.00%		Q29J74              	100.00%
Bootstrap support for F6RDQ7 as seed ortholog is 100%.
Bootstrap support for Q29J74 as seed ortholog is 100%.

Group of orthologs #3814. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 D.pseudoobscura:64

F6TBF1              	100.00%		Q29JD1              	100.00%
Bootstrap support for F6TBF1 as seed ortholog is 100%.
Bootstrap support for Q29JD1 as seed ortholog is 100%.

Group of orthologs #3815. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 D.pseudoobscura:64

F7B2W7              	100.00%		Q29C79              	100.00%
Bootstrap support for F7B2W7 as seed ortholog is 100%.
Bootstrap support for Q29C79 as seed ortholog is 100%.

Group of orthologs #3816. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 D.pseudoobscura:64

H2XV31              	100.00%		Q28X27              	100.00%
Bootstrap support for H2XV31 as seed ortholog is 100%.
Bootstrap support for Q28X27 as seed ortholog is 100%.

Group of orthologs #3817. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 D.pseudoobscura:64

H2XWX4              	100.00%		Q28Y19              	100.00%
Bootstrap support for H2XWX4 as seed ortholog is 100%.
Bootstrap support for Q28Y19 as seed ortholog is 100%.

Group of orthologs #3818. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 D.pseudoobscura:64

F7A3X7              	100.00%		Q29JI8              	100.00%
Bootstrap support for F7A3X7 as seed ortholog is 100%.
Bootstrap support for Q29JI8 as seed ortholog is 100%.

Group of orthologs #3819. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 D.pseudoobscura:64

F6ZYN8              	100.00%		Q29ML7              	100.00%
Bootstrap support for F6ZYN8 as seed ortholog is 100%.
Bootstrap support for Q29ML7 as seed ortholog is 100%.

Group of orthologs #3820. Best score 64 bits
Score difference with first non-orthologous sequence - C.intestinalis:64 D.pseudoobscura:15

Q1RPU6              	100.00%		Q299B2              	100.00%
Bootstrap support for Q1RPU6 as seed ortholog is 100%.
Bootstrap support for Q299B2 as seed ortholog is 74%.
Alternative seed ortholog is Q29AR6 (15 bits away from this cluster)

Group of orthologs #3821. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 D.pseudoobscura:63

F6X515              	100.00%		B5DJ34              	100.00%
                    	       		Q29DK6              	59.87%
Bootstrap support for F6X515 as seed ortholog is 100%.
Bootstrap support for B5DJ34 as seed ortholog is 100%.

Group of orthologs #3822. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 D.pseudoobscura:63

F6U8R6              	100.00%		Q28Y84              	100.00%
Bootstrap support for F6U8R6 as seed ortholog is 100%.
Bootstrap support for Q28Y84 as seed ortholog is 100%.

Group of orthologs #3823. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 D.pseudoobscura:63

F6TZ23              	100.00%		Q29LD9              	100.00%
Bootstrap support for F6TZ23 as seed ortholog is 100%.
Bootstrap support for Q29LD9 as seed ortholog is 100%.

Group of orthologs #3824. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 D.pseudoobscura:63

H2XVV1              	100.00%		B5DVQ3              	100.00%
Bootstrap support for H2XVV1 as seed ortholog is 100%.
Bootstrap support for B5DVQ3 as seed ortholog is 100%.

Group of orthologs #3825. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 D.pseudoobscura:63

H2Y1M0              	100.00%		Q29DI6              	100.00%
Bootstrap support for H2Y1M0 as seed ortholog is 100%.
Bootstrap support for Q29DI6 as seed ortholog is 100%.

Group of orthologs #3826. Best score 63 bits
Score difference with first non-orthologous sequence - C.intestinalis:63 D.pseudoobscura:12

H2XTV7              	100.00%		Q29ME5              	100.00%
Bootstrap support for H2XTV7 as seed ortholog is 100%.
Bootstrap support for Q29ME5 as seed ortholog is 82%.

Group of orthologs #3827. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:62

F8WQ81              	100.00%		B5DNF6              	100.00%
F6QD80              	100.00%		B5DMQ7              	100.00%
F7A2L3              	23.62%		Q29H92              	31.73%
H2XXT4              	22.55%		Q29H93              	28.39%
F6ZH80              	20.00%		Q293X4              	25.05%
F6SR80              	18.09%		Q28WL4              	24.02%
F6UBE7              	12.55%		B5DPT5              	20.67%
F6QK47              	6.81%		B5DLY9              	18.79%
                    	       		Q29H83              	18.79%
                    	       		Q28WL5              	18.69%
                    	       		Q2LZK8              	18.58%
                    	       		Q28XA3              	17.54%
                    	       		Q28XV1              	16.49%
                    	       		B5E193              	10.68%
                    	       		B5DJX3              	10.68%
                    	       		B5E192              	10.02%
                    	       		B5DXQ5              	9.60%
                    	       		B5E0H5              	9.03%
                    	       		Q293J2              	8.98%
                    	       		B5E0H6              	8.56%
                    	       		B5E0X0              	5.54%
                    	       		B5DXR1              	5.43%
Bootstrap support for F8WQ81 as seed ortholog is 100%.
Bootstrap support for F6QD80 as seed ortholog is 100%.
Bootstrap support for B5DNF6 as seed ortholog is 100%.
Bootstrap support for B5DMQ7 as seed ortholog is 100%.

Group of orthologs #3828. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:62

H2XSW8              	100.00%		Q29F92              	100.00%
                    	       		Q29F98              	19.06%
                    	       		Q29F97              	17.89%
                    	       		B5DU65              	16.42%
                    	       		Q29EN7              	7.92%
Bootstrap support for H2XSW8 as seed ortholog is 100%.
Bootstrap support for Q29F92 as seed ortholog is 100%.

Group of orthologs #3829. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:62

F6S2G5              	100.00%		B5DKY6              	100.00%
                    	       		Q29D44              	16.99%
Bootstrap support for F6S2G5 as seed ortholog is 100%.
Bootstrap support for B5DKY6 as seed ortholog is 100%.

Group of orthologs #3830. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:62

F6YTT5              	100.00%		B5DNJ5              	100.00%
H2XVF4              	19.53%		
Bootstrap support for F6YTT5 as seed ortholog is 100%.
Bootstrap support for B5DNJ5 as seed ortholog is 100%.

Group of orthologs #3831. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:62

H2XZH0              	100.00%		B5DMG8              	100.00%
F6QMJ9              	14.80%		
Bootstrap support for H2XZH0 as seed ortholog is 100%.
Bootstrap support for B5DMG8 as seed ortholog is 100%.

Group of orthologs #3832. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:62

F6QZE9              	100.00%		Q296Z7              	100.00%
Bootstrap support for F6QZE9 as seed ortholog is 100%.
Bootstrap support for Q296Z7 as seed ortholog is 100%.

Group of orthologs #3833. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:62

F6R2K7              	100.00%		Q299C7              	100.00%
Bootstrap support for F6R2K7 as seed ortholog is 100%.
Bootstrap support for Q299C7 as seed ortholog is 100%.

Group of orthologs #3834. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:62

F6VEV6              	100.00%		Q293U1              	100.00%
Bootstrap support for F6VEV6 as seed ortholog is 100%.
Bootstrap support for Q293U1 as seed ortholog is 100%.

Group of orthologs #3835. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:62

F6Z589              	100.00%		I5AP51              	100.00%
Bootstrap support for F6Z589 as seed ortholog is 100%.
Bootstrap support for I5AP51 as seed ortholog is 100%.

Group of orthologs #3836. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:62

F6UFD9              	100.00%		Q29B69              	100.00%
Bootstrap support for F6UFD9 as seed ortholog is 100%.
Bootstrap support for Q29B69 as seed ortholog is 100%.

Group of orthologs #3837. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:62

F6UBQ5              	100.00%		Q29IE4              	100.00%
Bootstrap support for F6UBQ5 as seed ortholog is 100%.
Bootstrap support for Q29IE4 as seed ortholog is 100%.

Group of orthologs #3838. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:62

F6YE69              	100.00%		Q29MK3              	100.00%
Bootstrap support for F6YE69 as seed ortholog is 100%.
Bootstrap support for Q29MK3 as seed ortholog is 100%.

Group of orthologs #3839. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:62

F6YUP1              	100.00%		Q29MS5              	100.00%
Bootstrap support for F6YUP1 as seed ortholog is 100%.
Bootstrap support for Q29MS5 as seed ortholog is 100%.

Group of orthologs #3840. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:6

H2XYG4              	100.00%		Q29CW5              	100.00%
Bootstrap support for H2XYG4 as seed ortholog is 100%.
Bootstrap support for Q29CW5 as seed ortholog is 60%.
Alternative seed ortholog is Q29KN7 (6 bits away from this cluster)

Group of orthologs #3841. Best score 62 bits
Score difference with first non-orthologous sequence - C.intestinalis:62 D.pseudoobscura:62

H2XY84              	100.00%		Q29GJ2              	100.00%
Bootstrap support for H2XY84 as seed ortholog is 100%.
Bootstrap support for Q29GJ2 as seed ortholog is 100%.

Group of orthologs #3842. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 D.pseudoobscura:61

F6Q9R4              	100.00%		Q290Y5              	100.00%
F6VTH2              	100.00%		
F6V4V8              	15.45%		
Q8T894              	15.02%		
Bootstrap support for F6Q9R4 as seed ortholog is 100%.
Bootstrap support for F6VTH2 as seed ortholog is 100%.
Bootstrap support for Q290Y5 as seed ortholog is 100%.

Group of orthologs #3843. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:16 D.pseudoobscura:61

F6VMK4              	100.00%		Q290M6              	100.00%
F6S0I4              	5.68%		
Bootstrap support for F6VMK4 as seed ortholog is 81%.
Bootstrap support for Q290M6 as seed ortholog is 100%.

Group of orthologs #3844. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 D.pseudoobscura:61

H2XYU7              	100.00%		B5DL91              	100.00%
Bootstrap support for H2XYU7 as seed ortholog is 100%.
Bootstrap support for B5DL91 as seed ortholog is 100%.

Group of orthologs #3845. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 D.pseudoobscura:14

F6ZPP4              	100.00%		Q29BI4              	100.00%
Bootstrap support for F6ZPP4 as seed ortholog is 100%.
Bootstrap support for Q29BI4 as seed ortholog is 72%.
Alternative seed ortholog is Q29E93 (14 bits away from this cluster)

Group of orthologs #3846. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 D.pseudoobscura:61

F6WUP8              	100.00%		Q29NX6              	100.00%
Bootstrap support for F6WUP8 as seed ortholog is 100%.
Bootstrap support for Q29NX6 as seed ortholog is 100%.

Group of orthologs #3847. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 D.pseudoobscura:61

H2XM94              	100.00%		Q29DC1              	100.00%
Bootstrap support for H2XM94 as seed ortholog is 100%.
Bootstrap support for Q29DC1 as seed ortholog is 100%.

Group of orthologs #3848. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 D.pseudoobscura:61

Q70W02              	100.00%		Q29CU1              	100.00%
Bootstrap support for Q70W02 as seed ortholog is 100%.
Bootstrap support for Q29CU1 as seed ortholog is 100%.

Group of orthologs #3849. Best score 61 bits
Score difference with first non-orthologous sequence - C.intestinalis:61 D.pseudoobscura:61

H2Y1M8              	100.00%		Q29KW8              	100.00%
Bootstrap support for H2Y1M8 as seed ortholog is 100%.
Bootstrap support for Q29KW8 as seed ortholog is 100%.

Group of orthologs #3850. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 D.pseudoobscura:60

H2XZ03              	100.00%		B5DMQ9              	100.00%
                    	       		B5DMR1              	51.21%
Bootstrap support for H2XZ03 as seed ortholog is 100%.
Bootstrap support for B5DMQ9 as seed ortholog is 100%.

Group of orthologs #3851. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 D.pseudoobscura:2

H2XYB2              	100.00%		B5DRK9              	100.00%
                    	       		B5DN13              	36.05%
Bootstrap support for H2XYB2 as seed ortholog is 100%.
Bootstrap support for B5DRK9 as seed ortholog is 43%.
Alternative seed ortholog is Q28ZZ0 (2 bits away from this cluster)

Group of orthologs #3852. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 D.pseudoobscura:60

H2XVI8              	100.00%		B5DUS2              	100.00%
                    	       		I5ANB7              	95.62%
Bootstrap support for H2XVI8 as seed ortholog is 100%.
Bootstrap support for B5DUS2 as seed ortholog is 100%.

Group of orthologs #3853. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 D.pseudoobscura:60

F6XY64              	100.00%		B5DN31              	100.00%
Bootstrap support for F6XY64 as seed ortholog is 100%.
Bootstrap support for B5DN31 as seed ortholog is 100%.

Group of orthologs #3854. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 D.pseudoobscura:60

F7AZM4              	100.00%		B5DQT0              	100.00%
Bootstrap support for F7AZM4 as seed ortholog is 100%.
Bootstrap support for B5DQT0 as seed ortholog is 100%.

Group of orthologs #3855. Best score 60 bits
Score difference with first non-orthologous sequence - C.intestinalis:60 D.pseudoobscura:60

Q4H2N1              	100.00%		Q29HN1              	100.00%
Bootstrap support for Q4H2N1 as seed ortholog is 100%.
Bootstrap support for Q29HN1 as seed ortholog is 100%.

Group of orthologs #3856. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 D.pseudoobscura:59

F6XB23              	100.00%		B5DK61              	51.23%
F6ZAZ4              	100.00%		B5DJT1              	100.00%
F6TBP5              	100.00%		Q29GC4              	100.00%
F6RAF6              	100.00%		B5DKB2              	100.00%
F6VE25              	100.00%		Q28WY3              	100.00%
F6PNN6              	76.12%		Q29K46              	20.77%
F6VHD2              	74.35%		B5DZU3              	18.44%
F6Q1K9              	70.82%		I5ANP4              	8.06%
F6V750              	70.35%		Q28WY2              	6.83%
F6STM2              	54.23%		B5E1M8              	6.83%
F6SYC7              	50.18%		
H2XYK1              	38.35%		
F6T6D5              	7.31%		
F6Q1U9              	6.70%		
Bootstrap support for F6XB23 as seed ortholog is 100%.
Bootstrap support for F6ZAZ4 as seed ortholog is 100%.
Bootstrap support for F6TBP5 as seed ortholog is 100%.
Bootstrap support for F6RAF6 as seed ortholog is 100%.
Bootstrap support for F6VE25 as seed ortholog is 100%.
Bootstrap support for B5DJT1 as seed ortholog is 100%.
Bootstrap support for Q29GC4 as seed ortholog is 100%.
Bootstrap support for B5DKB2 as seed ortholog is 100%.
Bootstrap support for Q28WY3 as seed ortholog is 100%.

Group of orthologs #3857. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 D.pseudoobscura:13

F6WLC1              	100.00%		Q295B8              	100.00%
H2XT38              	69.48%		
H2XRA5              	5.57%		
Bootstrap support for F6WLC1 as seed ortholog is 54%.
Alternative seed ortholog is H2XWF5 (7 bits away from this cluster)
Bootstrap support for Q295B8 as seed ortholog is 50%.
Alternative seed ortholog is Q291W3 (13 bits away from this cluster)

Group of orthologs #3858. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 D.pseudoobscura:59

H2XPA2              	100.00%		B5DHW5              	100.00%
Bootstrap support for H2XPA2 as seed ortholog is 100%.
Bootstrap support for B5DHW5 as seed ortholog is 100%.

Group of orthologs #3859. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 D.pseudoobscura:59

H2XRX3              	100.00%		B5E1A6              	100.00%
Bootstrap support for H2XRX3 as seed ortholog is 100%.
Bootstrap support for B5E1A6 as seed ortholog is 100%.

Group of orthologs #3860. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 D.pseudoobscura:59

F7A9T3              	100.00%		Q29KT7              	100.00%
Bootstrap support for F7A9T3 as seed ortholog is 100%.
Bootstrap support for Q29KT7 as seed ortholog is 100%.

Group of orthologs #3861. Best score 59 bits
Score difference with first non-orthologous sequence - C.intestinalis:59 D.pseudoobscura:59

Q1RL59              	100.00%		Q29G60              	100.00%
Bootstrap support for Q1RL59 as seed ortholog is 100%.
Bootstrap support for Q29G60 as seed ortholog is 100%.

Group of orthologs #3862. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 D.pseudoobscura:16

F6S8K0              	100.00%		B5DKL7              	100.00%
                    	       		Q296A0              	5.40%
Bootstrap support for F6S8K0 as seed ortholog is 100%.
Bootstrap support for B5DKL7 as seed ortholog is 72%.
Alternative seed ortholog is Q2LZU1 (16 bits away from this cluster)

Group of orthologs #3863. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:3 D.pseudoobscura:0

F7B5E7              	100.00%		Q29NF4              	100.00%
F7B6U2              	5.80%		
Bootstrap support for F7B5E7 as seed ortholog is 44%.
Alternative seed ortholog is F6SPI0 (3 bits away from this cluster)
Bootstrap support for Q29NF4 as seed ortholog is 52%.
Alternative seed ortholog is Q29P64 (0 bits away from this cluster)

Group of orthologs #3864. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 D.pseudoobscura:58

F6ZH72              	100.00%		Q28Z50              	100.00%
Bootstrap support for F6ZH72 as seed ortholog is 100%.
Bootstrap support for Q28Z50 as seed ortholog is 100%.

Group of orthologs #3865. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 D.pseudoobscura:58

F6WS42              	100.00%		Q29HF3              	100.00%
Bootstrap support for F6WS42 as seed ortholog is 100%.
Bootstrap support for Q29HF3 as seed ortholog is 100%.

Group of orthologs #3866. Best score 58 bits
Score difference with first non-orthologous sequence - C.intestinalis:58 D.pseudoobscura:58

F7B8Z4              	100.00%		Q2M0Y1              	100.00%
Bootstrap support for F7B8Z4 as seed ortholog is 100%.
Bootstrap support for Q2M0Y1 as seed ortholog is 100%.

Group of orthologs #3867. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 D.pseudoobscura:8

F6W426              	100.00%		B5DKD7              	100.00%
F6RPS0              	11.21%		B5E1A5              	44.11%
                    	       		B5DKD2              	42.61%
                    	       		Q29JM9              	28.32%
                    	       		Q29JC4              	14.04%
Bootstrap support for F6W426 as seed ortholog is 100%.
Bootstrap support for B5DKD7 as seed ortholog is 59%.
Alternative seed ortholog is Q29FQ9 (8 bits away from this cluster)

Group of orthologs #3868. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 D.pseudoobscura:57

H2Y3V1              	100.00%		Q28XY7              	100.00%
H2XWS5              	10.52%		Q294P7              	5.63%
Bootstrap support for H2Y3V1 as seed ortholog is 100%.
Bootstrap support for Q28XY7 as seed ortholog is 100%.

Group of orthologs #3869. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 D.pseudoobscura:57

F6YHQ3              	100.00%		Q29JW3              	100.00%
Bootstrap support for F6YHQ3 as seed ortholog is 100%.
Bootstrap support for Q29JW3 as seed ortholog is 100%.

Group of orthologs #3870. Best score 57 bits
Score difference with first non-orthologous sequence - C.intestinalis:57 D.pseudoobscura:57

H2Y018              	100.00%		Q2M068              	100.00%
Bootstrap support for H2Y018 as seed ortholog is 100%.
Bootstrap support for Q2M068 as seed ortholog is 100%.

Group of orthologs #3871. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 D.pseudoobscura:56

F6QNI1              	100.00%		Q299V3              	100.00%
                    	       		Q2M0E4              	8.53%
Bootstrap support for F6QNI1 as seed ortholog is 100%.
Bootstrap support for Q299V3 as seed ortholog is 100%.

Group of orthologs #3872. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 D.pseudoobscura:56

F6S8G5              	100.00%		B5DVV5              	100.00%
Bootstrap support for F6S8G5 as seed ortholog is 100%.
Bootstrap support for B5DVV5 as seed ortholog is 100%.

Group of orthologs #3873. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 D.pseudoobscura:56

F6SAH1              	100.00%		Q296U4              	100.00%
Bootstrap support for F6SAH1 as seed ortholog is 100%.
Bootstrap support for Q296U4 as seed ortholog is 100%.

Group of orthologs #3874. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 D.pseudoobscura:56

F6XQP0              	100.00%		Q28WY8              	100.00%
Bootstrap support for F6XQP0 as seed ortholog is 100%.
Bootstrap support for Q28WY8 as seed ortholog is 100%.

Group of orthologs #3875. Best score 56 bits
Score difference with first non-orthologous sequence - C.intestinalis:56 D.pseudoobscura:56

H2XZU9              	100.00%		Q2LZX3              	100.00%
Bootstrap support for H2XZU9 as seed ortholog is 100%.
Bootstrap support for Q2LZX3 as seed ortholog is 100%.

Group of orthologs #3876. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 D.pseudoobscura:55

F7AE23              	100.00%		B5DUX0              	100.00%
H2Y1C5              	43.58%		
H2XQG5              	23.88%		
F6W7E5              	23.58%		
Bootstrap support for F7AE23 as seed ortholog is 100%.
Bootstrap support for B5DUX0 as seed ortholog is 100%.

Group of orthologs #3877. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 D.pseudoobscura:55

F6SCV9              	100.00%		B5DYF6              	100.00%
                    	       		B5DHJ3              	25.07%
                    	       		B5DPJ2              	14.77%
Bootstrap support for F6SCV9 as seed ortholog is 100%.
Bootstrap support for B5DYF6 as seed ortholog is 100%.

Group of orthologs #3878. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 D.pseudoobscura:55

F6QDK5              	100.00%		Q29JT2              	100.00%
                    	       		Q29JT1              	35.94%
                    	       		Q29PB9              	9.54%
Bootstrap support for F6QDK5 as seed ortholog is 100%.
Bootstrap support for Q29JT2 as seed ortholog is 100%.

Group of orthologs #3879. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 D.pseudoobscura:55

H2XYZ5              	100.00%		B5DP48              	100.00%
H2XZE9              	32.17%		
Bootstrap support for H2XYZ5 as seed ortholog is 100%.
Bootstrap support for B5DP48 as seed ortholog is 100%.

Group of orthologs #3880. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 D.pseudoobscura:55

F6TNV5              	100.00%		Q28ZE1              	100.00%
Bootstrap support for F6TNV5 as seed ortholog is 100%.
Bootstrap support for Q28ZE1 as seed ortholog is 100%.

Group of orthologs #3881. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 D.pseudoobscura:55

H2Y2M8              	100.00%		B5DPM2              	100.00%
Bootstrap support for H2Y2M8 as seed ortholog is 100%.
Bootstrap support for B5DPM2 as seed ortholog is 100%.

Group of orthologs #3882. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 D.pseudoobscura:55

H2XYC4              	100.00%		Q297M9              	100.00%
Bootstrap support for H2XYC4 as seed ortholog is 100%.
Bootstrap support for Q297M9 as seed ortholog is 100%.

Group of orthologs #3883. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 D.pseudoobscura:55

H2XY39              	100.00%		Q29CW4              	100.00%
Bootstrap support for H2XY39 as seed ortholog is 100%.
Bootstrap support for Q29CW4 as seed ortholog is 100%.

Group of orthologs #3884. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 D.pseudoobscura:55

H2Y286              	100.00%		Q298N5              	100.00%
Bootstrap support for H2Y286 as seed ortholog is 100%.
Bootstrap support for Q298N5 as seed ortholog is 100%.

Group of orthologs #3885. Best score 55 bits
Score difference with first non-orthologous sequence - C.intestinalis:55 D.pseudoobscura:55

Q4H2Z7              	100.00%		Q29CX1              	100.00%
Bootstrap support for Q4H2Z7 as seed ortholog is 100%.
Bootstrap support for Q29CX1 as seed ortholog is 100%.

Group of orthologs #3886. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 D.pseudoobscura:54

F6ZPA1              	100.00%		Q297A6              	100.00%
                    	       		Q28YU9              	17.69%
                    	       		B5DQ68              	5.00%
Bootstrap support for F6ZPA1 as seed ortholog is 100%.
Bootstrap support for Q297A6 as seed ortholog is 100%.

Group of orthologs #3887. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 D.pseudoobscura:54

F6UKU4              	100.00%		Q28X83              	100.00%
Bootstrap support for F6UKU4 as seed ortholog is 100%.
Bootstrap support for Q28X83 as seed ortholog is 100%.

Group of orthologs #3888. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 D.pseudoobscura:54

H2XQ07              	100.00%		B5DYC9              	100.00%
Bootstrap support for H2XQ07 as seed ortholog is 100%.
Bootstrap support for B5DYC9 as seed ortholog is 100%.

Group of orthologs #3889. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 D.pseudoobscura:54

F6ZWQ3              	100.00%		Q29NH9              	100.00%
Bootstrap support for F6ZWQ3 as seed ortholog is 100%.
Bootstrap support for Q29NH9 as seed ortholog is 100%.

Group of orthologs #3890. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 D.pseudoobscura:54

H2XNY2              	100.00%		Q29FS5              	100.00%
Bootstrap support for H2XNY2 as seed ortholog is 100%.
Bootstrap support for Q29FS5 as seed ortholog is 100%.

Group of orthologs #3891. Best score 54 bits
Score difference with first non-orthologous sequence - C.intestinalis:54 D.pseudoobscura:54

H2XZJ1              	100.00%		Q2LZQ0              	100.00%
Bootstrap support for H2XZJ1 as seed ortholog is 100%.
Bootstrap support for Q2LZQ0 as seed ortholog is 100%.

Group of orthologs #3892. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 D.pseudoobscura:53

F7AY10              	100.00%		B5DK43              	100.00%
Bootstrap support for F7AY10 as seed ortholog is 100%.
Bootstrap support for B5DK43 as seed ortholog is 100%.

Group of orthologs #3893. Best score 53 bits
Score difference with first non-orthologous sequence - C.intestinalis:53 D.pseudoobscura:53

H2XN49              	100.00%		Q29II9              	100.00%
Bootstrap support for H2XN49 as seed ortholog is 100%.
Bootstrap support for Q29II9 as seed ortholog is 100%.

Group of orthologs #3894. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 D.pseudoobscura:52

F6XXK1              	100.00%		Q28X92              	100.00%
Bootstrap support for F6XXK1 as seed ortholog is 100%.
Bootstrap support for Q28X92 as seed ortholog is 100%.

Group of orthologs #3895. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 D.pseudoobscura:52

F7ARB4              	100.00%		B5DZ81              	100.00%
Bootstrap support for F7ARB4 as seed ortholog is 100%.
Bootstrap support for B5DZ81 as seed ortholog is 100%.

Group of orthologs #3896. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 D.pseudoobscura:52

H2XP47              	100.00%		B5E084              	100.00%
Bootstrap support for H2XP47 as seed ortholog is 59%.
Alternative seed ortholog is H2XXW5 (6 bits away from this cluster)
Bootstrap support for B5E084 as seed ortholog is 100%.

Group of orthologs #3897. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 D.pseudoobscura:52

F7APR6              	100.00%		Q29HQ8              	100.00%
Bootstrap support for F7APR6 as seed ortholog is 100%.
Bootstrap support for Q29HQ8 as seed ortholog is 100%.

Group of orthologs #3898. Best score 52 bits
Score difference with first non-orthologous sequence - C.intestinalis:52 D.pseudoobscura:52

H2XM88              	100.00%		Q29P87              	100.00%
Bootstrap support for H2XM88 as seed ortholog is 100%.
Bootstrap support for Q29P87 as seed ortholog is 100%.

Group of orthologs #3899. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:6 D.pseudoobscura:51

F6WMA6              	100.00%		B5DS76              	100.00%
Bootstrap support for F6WMA6 as seed ortholog is 61%.
Alternative seed ortholog is F7B236 (6 bits away from this cluster)
Bootstrap support for B5DS76 as seed ortholog is 100%.

Group of orthologs #3900. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 D.pseudoobscura:51

F6RF58              	100.00%		Q294X4              	100.00%
Bootstrap support for F6RF58 as seed ortholog is 100%.
Bootstrap support for Q294X4 as seed ortholog is 100%.

Group of orthologs #3901. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:9 D.pseudoobscura:51

H2XNL5              	100.00%		B5DRN5              	100.00%
Bootstrap support for H2XNL5 as seed ortholog is 70%.
Alternative seed ortholog is F6SPE9 (9 bits away from this cluster)
Bootstrap support for B5DRN5 as seed ortholog is 100%.

Group of orthologs #3902. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 D.pseudoobscura:51

F7B8A5              	100.00%		I5APL6              	100.00%
Bootstrap support for F7B8A5 as seed ortholog is 100%.
Bootstrap support for I5APL6 as seed ortholog is 100%.

Group of orthologs #3903. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:7 D.pseudoobscura:51

H2XQR3              	100.00%		Q28Y75              	100.00%
Bootstrap support for H2XQR3 as seed ortholog is 71%.
Alternative seed ortholog is H2XXW5 (7 bits away from this cluster)
Bootstrap support for Q28Y75 as seed ortholog is 100%.

Group of orthologs #3904. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 D.pseudoobscura:51

H2Y058              	100.00%		B5DUM6              	100.00%
Bootstrap support for H2Y058 as seed ortholog is 100%.
Bootstrap support for B5DUM6 as seed ortholog is 100%.

Group of orthologs #3905. Best score 51 bits
Score difference with first non-orthologous sequence - C.intestinalis:51 D.pseudoobscura:51

H2Y017              	100.00%		Q29C93              	100.00%
Bootstrap support for H2Y017 as seed ortholog is 100%.
Bootstrap support for Q29C93 as seed ortholog is 100%.

Group of orthologs #3906. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 D.pseudoobscura:50

F6W1Z3              	100.00%		Q292H9              	100.00%
Bootstrap support for F6W1Z3 as seed ortholog is 100%.
Bootstrap support for Q292H9 as seed ortholog is 100%.

Group of orthologs #3907. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 D.pseudoobscura:50

F6Y5E2              	100.00%		Q29CI5              	100.00%
Bootstrap support for F6Y5E2 as seed ortholog is 100%.
Bootstrap support for Q29CI5 as seed ortholog is 100%.

Group of orthologs #3908. Best score 50 bits
Score difference with first non-orthologous sequence - C.intestinalis:50 D.pseudoobscura:50

H2Y0G7              	100.00%		B5DNC0              	100.00%
Bootstrap support for H2Y0G7 as seed ortholog is 100%.
Bootstrap support for B5DNC0 as seed ortholog is 100%.

Group of orthologs #3909. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 D.pseudoobscura:49

F6VBW9              	100.00%		Q29CZ0              	100.00%
F6U189              	16.48%		B5DRW6              	8.87%
                    	       		B5DI97              	8.70%
Bootstrap support for F6VBW9 as seed ortholog is 100%.
Bootstrap support for Q29CZ0 as seed ortholog is 100%.

Group of orthologs #3910. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 D.pseudoobscura:49

H2XZT3              	100.00%		B5DUW4              	100.00%
Bootstrap support for H2XZT3 as seed ortholog is 100%.
Bootstrap support for B5DUW4 as seed ortholog is 100%.

Group of orthologs #3911. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 D.pseudoobscura:49

H2Y1I9              	100.00%		Q28XK5              	100.00%
Bootstrap support for H2Y1I9 as seed ortholog is 100%.
Bootstrap support for Q28XK5 as seed ortholog is 100%.

Group of orthologs #3912. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 D.pseudoobscura:49

H2Y1Z7              	100.00%		Q28YK3              	100.00%
Bootstrap support for H2Y1Z7 as seed ortholog is 100%.
Bootstrap support for Q28YK3 as seed ortholog is 100%.

Group of orthologs #3913. Best score 49 bits
Score difference with first non-orthologous sequence - C.intestinalis:49 D.pseudoobscura:49

H2XUF0              	100.00%		Q29NX0              	100.00%
Bootstrap support for H2XUF0 as seed ortholog is 100%.
Bootstrap support for Q29NX0 as seed ortholog is 100%.

Group of orthologs #3914. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 D.pseudoobscura:48

F6YXM0              	100.00%		Q29LL7              	100.00%
                    	       		Q29LL6              	21.57%
                    	       		Q29LL5              	10.78%
Bootstrap support for F6YXM0 as seed ortholog is 100%.
Bootstrap support for Q29LL7 as seed ortholog is 100%.

Group of orthologs #3915. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 D.pseudoobscura:48

H2XTI8              	100.00%		Q29H23              	100.00%
                    	       		B5DII8              	54.62%
                    	       		B5DII9              	12.31%
Bootstrap support for H2XTI8 as seed ortholog is 100%.
Bootstrap support for Q29H23 as seed ortholog is 100%.

Group of orthologs #3916. Best score 48 bits
Score difference with first non-orthologous sequence - C.intestinalis:48 D.pseudoobscura:48

F6ZJE6              	100.00%		Q2M1D4              	100.00%
Bootstrap support for F6ZJE6 as seed ortholog is 100%.
Bootstrap support for Q2M1D4 as seed ortholog is 100%.

Group of orthologs #3917. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 D.pseudoobscura:47

F6W7V1              	100.00%		B5DIM9              	100.00%
Bootstrap support for F6W7V1 as seed ortholog is 100%.
Bootstrap support for B5DIM9 as seed ortholog is 100%.

Group of orthologs #3918. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 D.pseudoobscura:47

H2XTY0              	100.00%		B5DIC5              	100.00%
Bootstrap support for H2XTY0 as seed ortholog is 100%.
Bootstrap support for B5DIC5 as seed ortholog is 100%.

Group of orthologs #3919. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 D.pseudoobscura:47

F6SSU9              	100.00%		Q2M020              	100.00%
Bootstrap support for F6SSU9 as seed ortholog is 100%.
Bootstrap support for Q2M020 as seed ortholog is 100%.

Group of orthologs #3920. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 D.pseudoobscura:3

F6VNT1              	100.00%		Q29L42              	100.00%
Bootstrap support for F6VNT1 as seed ortholog is 100%.
Bootstrap support for Q29L42 as seed ortholog is 55%.
Alternative seed ortholog is B5DKL0 (3 bits away from this cluster)

Group of orthologs #3921. Best score 47 bits
Score difference with first non-orthologous sequence - C.intestinalis:47 D.pseudoobscura:47

H2XYX0              	100.00%		Q28ZE3              	100.00%
Bootstrap support for H2XYX0 as seed ortholog is 100%.
Bootstrap support for Q28ZE3 as seed ortholog is 100%.

Group of orthologs #3922. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 D.pseudoobscura:46

H2Y083              	100.00%		B5DK20              	100.00%
                    	       		B5DK21              	5.72%
Bootstrap support for H2Y083 as seed ortholog is 100%.
Bootstrap support for B5DK20 as seed ortholog is 100%.

Group of orthologs #3923. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 D.pseudoobscura:46

F6PNZ0              	100.00%		B5DYD6              	100.00%
Bootstrap support for F6PNZ0 as seed ortholog is 100%.
Bootstrap support for B5DYD6 as seed ortholog is 100%.

Group of orthologs #3924. Best score 46 bits
Score difference with first non-orthologous sequence - C.intestinalis:46 D.pseudoobscura:46

H2XUX1              	100.00%		B5E082              	100.00%
Bootstrap support for H2XUX1 as seed ortholog is 100%.
Bootstrap support for B5E082 as seed ortholog is 100%.

Group of orthologs #3925. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 D.pseudoobscura:45

F6R0T4              	100.00%		B5DIA1              	100.00%
                    	       		B5DHE4              	41.64%
Bootstrap support for F6R0T4 as seed ortholog is 100%.
Bootstrap support for B5DIA1 as seed ortholog is 100%.

Group of orthologs #3926. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 D.pseudoobscura:45

H2XQG1              	100.00%		B5DHM2              	100.00%
Bootstrap support for H2XQG1 as seed ortholog is 100%.
Bootstrap support for B5DHM2 as seed ortholog is 100%.

Group of orthologs #3927. Best score 45 bits
Score difference with first non-orthologous sequence - C.intestinalis:45 D.pseudoobscura:45

H2XLQ4              	100.00%		Q2M0P2              	100.00%
Bootstrap support for H2XLQ4 as seed ortholog is 100%.
Bootstrap support for Q2M0P2 as seed ortholog is 100%.

Group of orthologs #3928. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 D.pseudoobscura:44

H2XQ20              	100.00%		Q28YY3              	100.00%
Bootstrap support for H2XQ20 as seed ortholog is 100%.
Bootstrap support for Q28YY3 as seed ortholog is 100%.

Group of orthologs #3929. Best score 44 bits
Score difference with first non-orthologous sequence - C.intestinalis:44 D.pseudoobscura:44

H2XU83              	100.00%		Q29GM1              	100.00%
Bootstrap support for H2XU83 as seed ortholog is 100%.
Bootstrap support for Q29GM1 as seed ortholog is 100%.

Group of orthologs #3930. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 D.pseudoobscura:43

F6RWZ5              	100.00%		B5DQS4              	100.00%
                    	       		B5DL36              	11.39%
                    	       		B5E0T0              	10.94%
                    	       		Q29M28              	10.76%
                    	       		Q29E25              	10.49%
                    	       		Q298U2              	8.41%
                    	       		Q29A34              	7.05%
                    	       		B5DRS0              	5.88%
                    	       		Q29CI7              	5.79%
Bootstrap support for F6RWZ5 as seed ortholog is 100%.
Bootstrap support for B5DQS4 as seed ortholog is 100%.

Group of orthologs #3931. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 D.pseudoobscura:43

F6ZKU9              	100.00%		D5MNY3              	100.00%
F7A367              	55.26%		
F6Q119              	29.32%		
F6WSS9              	10.90%		
Bootstrap support for F6ZKU9 as seed ortholog is 100%.
Bootstrap support for D5MNY3 as seed ortholog is 100%.

Group of orthologs #3932. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 D.pseudoobscura:43

F6T2V4              	100.00%		B5DS67              	100.00%
Bootstrap support for F6T2V4 as seed ortholog is 100%.
Bootstrap support for B5DS67 as seed ortholog is 100%.

Group of orthologs #3933. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 D.pseudoobscura:43

H2Y146              	100.00%		Q29EJ9              	100.00%
Bootstrap support for H2Y146 as seed ortholog is 100%.
Bootstrap support for Q29EJ9 as seed ortholog is 100%.

Group of orthologs #3934. Best score 43 bits
Score difference with first non-orthologous sequence - C.intestinalis:43 D.pseudoobscura:43

H2Y3U2              	100.00%		Q29CT7              	100.00%
Bootstrap support for H2Y3U2 as seed ortholog is 100%.
Bootstrap support for Q29CT7 as seed ortholog is 100%.

Group of orthologs #3935. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 D.pseudoobscura:42

F6YQ66              	100.00%		Q29B36              	100.00%
F6WNG6              	5.52%		
Bootstrap support for F6YQ66 as seed ortholog is 100%.
Bootstrap support for Q29B36 as seed ortholog is 100%.

Group of orthologs #3936. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 D.pseudoobscura:42

F6XI02              	100.00%		I5AMX2              	100.00%
Bootstrap support for F6XI02 as seed ortholog is 100%.
Bootstrap support for I5AMX2 as seed ortholog is 100%.

Group of orthologs #3937. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 D.pseudoobscura:42

F6PZ36              	100.00%		Q2LZ78              	100.00%
Bootstrap support for F6PZ36 as seed ortholog is 100%.
Bootstrap support for Q2LZ78 as seed ortholog is 100%.

Group of orthologs #3938. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 D.pseudoobscura:42

F6QP05              	100.00%		Q2M0H2              	100.00%
Bootstrap support for F6QP05 as seed ortholog is 100%.
Bootstrap support for Q2M0H2 as seed ortholog is 100%.

Group of orthologs #3939. Best score 42 bits
Score difference with first non-orthologous sequence - C.intestinalis:42 D.pseudoobscura:42

H2Y2U4              	100.00%		Q2LZI2              	100.00%
Bootstrap support for H2Y2U4 as seed ortholog is 100%.
Bootstrap support for Q2LZI2 as seed ortholog is 100%.

Group of orthologs #3940. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 D.pseudoobscura:41

F6SA32              	100.00%		B5DIX5              	100.00%
                    	       		B5DIX6              	30.77%
                    	       		B5DJ78              	17.23%
                    	       		B5DJ77              	16.00%
                    	       		B5DI47              	11.08%
Bootstrap support for F6SA32 as seed ortholog is 100%.
Bootstrap support for B5DIX5 as seed ortholog is 100%.

Group of orthologs #3941. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 D.pseudoobscura:41

F6YUX9              	100.00%		B5DIH6              	100.00%
Bootstrap support for F6YUX9 as seed ortholog is 100%.
Bootstrap support for B5DIH6 as seed ortholog is 100%.

Group of orthologs #3942. Best score 41 bits
Score difference with first non-orthologous sequence - C.intestinalis:41 D.pseudoobscura:41

F6X6Q2              	100.00%		Q290Z3              	100.00%
Bootstrap support for F6X6Q2 as seed ortholog is 100%.
Bootstrap support for Q290Z3 as seed ortholog is 100%.