###################################
396 groups of orthologs
528 in-paralogs from C.immitis
428 in-paralogs from L.interrogans
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1100 bits
Score difference with first non-orthologous sequence - C.immitis:1100 L.interrogans:1100

J3KLW0              	100.00%		Q8F7I9              	100.00%
Bootstrap support for J3KLW0 as seed ortholog is 100%.
Bootstrap support for Q8F7I9 as seed ortholog is 100%.

Group of orthologs #2. Best score 1048 bits
Score difference with first non-orthologous sequence - C.immitis:1048 L.interrogans:1048

J3K655              	100.00%		Q8F937              	100.00%
Bootstrap support for J3K655 as seed ortholog is 100%.
Bootstrap support for Q8F937 as seed ortholog is 100%.

Group of orthologs #3. Best score 945 bits
Score difference with first non-orthologous sequence - C.immitis:165 L.interrogans:945

J3KK58              	100.00%		Q8EX87              	100.00%
Bootstrap support for J3KK58 as seed ortholog is 99%.
Bootstrap support for Q8EX87 as seed ortholog is 100%.

Group of orthologs #4. Best score 765 bits
Score difference with first non-orthologous sequence - C.immitis:483 L.interrogans:592

Q1DLM0              	100.00%		Q8F983              	100.00%
Bootstrap support for Q1DLM0 as seed ortholog is 100%.
Bootstrap support for Q8F983 as seed ortholog is 100%.

Group of orthologs #5. Best score 742 bits
Score difference with first non-orthologous sequence - C.immitis:742 L.interrogans:742

J3KL93              	100.00%		Q8F832              	100.00%
Bootstrap support for J3KL93 as seed ortholog is 100%.
Bootstrap support for Q8F832 as seed ortholog is 100%.

Group of orthologs #6. Best score 731 bits
Score difference with first non-orthologous sequence - C.immitis:731 L.interrogans:731

J3KJT8              	100.00%		Q8F6S7              	100.00%
Bootstrap support for J3KJT8 as seed ortholog is 100%.
Bootstrap support for Q8F6S7 as seed ortholog is 100%.

Group of orthologs #7. Best score 718 bits
Score difference with first non-orthologous sequence - C.immitis:6 L.interrogans:226

J3KB40              	100.00%		Q8F509              	100.00%
Bootstrap support for J3KB40 as seed ortholog is 45%.
Alternative seed ortholog is J3KA13 (6 bits away from this cluster)
Bootstrap support for Q8F509 as seed ortholog is 99%.

Group of orthologs #8. Best score 662 bits
Score difference with first non-orthologous sequence - C.immitis:96 L.interrogans:662

J3KDW8              	100.00%		P61443              	100.00%
Bootstrap support for J3KDW8 as seed ortholog is 99%.
Bootstrap support for P61443 as seed ortholog is 100%.

Group of orthologs #9. Best score 661 bits
Score difference with first non-orthologous sequence - C.immitis:277 L.interrogans:661

J3KJM0              	100.00%		Q8EYG2              	100.00%
Bootstrap support for J3KJM0 as seed ortholog is 100%.
Bootstrap support for Q8EYG2 as seed ortholog is 100%.

Group of orthologs #10. Best score 599 bits
Score difference with first non-orthologous sequence - C.immitis:458 L.interrogans:456

J3K9H3              	100.00%		Q8EZP9              	100.00%
Bootstrap support for J3K9H3 as seed ortholog is 100%.
Bootstrap support for Q8EZP9 as seed ortholog is 100%.

Group of orthologs #11. Best score 589 bits
Score difference with first non-orthologous sequence - C.immitis:463 L.interrogans:589

J3K8C2              	100.00%		Q8F2J5              	100.00%
Bootstrap support for J3K8C2 as seed ortholog is 100%.
Bootstrap support for Q8F2J5 as seed ortholog is 100%.

Group of orthologs #12. Best score 583 bits
Score difference with first non-orthologous sequence - C.immitis:150 L.interrogans:583

J3K5M3              	100.00%		Q8F0A0              	100.00%
Bootstrap support for J3K5M3 as seed ortholog is 98%.
Bootstrap support for Q8F0A0 as seed ortholog is 100%.

Group of orthologs #13. Best score 576 bits
Score difference with first non-orthologous sequence - C.immitis:381 L.interrogans:576

J3KL31              	100.00%		Q8EZT8              	100.00%
Bootstrap support for J3KL31 as seed ortholog is 100%.
Bootstrap support for Q8EZT8 as seed ortholog is 100%.

Group of orthologs #14. Best score 572 bits
Score difference with first non-orthologous sequence - C.immitis:417 L.interrogans:572

I9NN00              	100.00%		Q8F4E6              	100.00%
Bootstrap support for I9NN00 as seed ortholog is 100%.
Bootstrap support for Q8F4E6 as seed ortholog is 100%.

Group of orthologs #15. Best score 566 bits
Score difference with first non-orthologous sequence - C.immitis:430 L.interrogans:431

J3K6Z7              	100.00%		Q8F500              	100.00%
Bootstrap support for J3K6Z7 as seed ortholog is 100%.
Bootstrap support for Q8F500 as seed ortholog is 100%.

Group of orthologs #16. Best score 559 bits
Score difference with first non-orthologous sequence - C.immitis:450 L.interrogans:559

J3KDL6              	100.00%		Q8F2J2              	100.00%
Bootstrap support for J3KDL6 as seed ortholog is 100%.
Bootstrap support for Q8F2J2 as seed ortholog is 100%.

Group of orthologs #17. Best score 550 bits
Score difference with first non-orthologous sequence - C.immitis:550 L.interrogans:550

J3K7D6              	100.00%		Q8F9L0              	100.00%
Bootstrap support for J3K7D6 as seed ortholog is 100%.
Bootstrap support for Q8F9L0 as seed ortholog is 100%.

Group of orthologs #18. Best score 549 bits
Score difference with first non-orthologous sequence - C.immitis:549 L.interrogans:549

I9NPK0              	100.00%		Q8EXV1              	100.00%
Bootstrap support for I9NPK0 as seed ortholog is 100%.
Bootstrap support for Q8EXV1 as seed ortholog is 100%.

Group of orthologs #19. Best score 547 bits
Score difference with first non-orthologous sequence - C.immitis:547 L.interrogans:547

J3K6M4              	100.00%		Q8F219              	100.00%
J3KEA2              	13.10%		
Bootstrap support for J3K6M4 as seed ortholog is 100%.
Bootstrap support for Q8F219 as seed ortholog is 100%.

Group of orthologs #20. Best score 544 bits
Score difference with first non-orthologous sequence - C.immitis:454 L.interrogans:544

J3K8C5              	100.00%		P61439              	100.00%
Bootstrap support for J3K8C5 as seed ortholog is 100%.
Bootstrap support for P61439 as seed ortholog is 100%.

Group of orthologs #21. Best score 542 bits
Score difference with first non-orthologous sequence - C.immitis:209 L.interrogans:542

J3K5I9              	100.00%		Q8F6I1              	100.00%
Bootstrap support for J3K5I9 as seed ortholog is 99%.
Bootstrap support for Q8F6I1 as seed ortholog is 100%.

Group of orthologs #22. Best score 527 bits
Score difference with first non-orthologous sequence - C.immitis:527 L.interrogans:527

J3KE18              	100.00%		Q8F4Q4              	100.00%
Bootstrap support for J3KE18 as seed ortholog is 100%.
Bootstrap support for Q8F4Q4 as seed ortholog is 100%.

Group of orthologs #23. Best score 481 bits
Score difference with first non-orthologous sequence - C.immitis:260 L.interrogans:481

J3K8E8              	100.00%		Q8F4H9              	100.00%
Bootstrap support for J3K8E8 as seed ortholog is 100%.
Bootstrap support for Q8F4H9 as seed ortholog is 100%.

Group of orthologs #24. Best score 475 bits
Score difference with first non-orthologous sequence - C.immitis:475 L.interrogans:475

J3KMA0              	100.00%		Q8EY59              	100.00%
Bootstrap support for J3KMA0 as seed ortholog is 100%.
Bootstrap support for Q8EY59 as seed ortholog is 100%.

Group of orthologs #25. Best score 466 bits
Score difference with first non-orthologous sequence - C.immitis:162 L.interrogans:466

J3KKB5              	100.00%		Q8F6R1              	100.00%
Bootstrap support for J3KKB5 as seed ortholog is 99%.
Bootstrap support for Q8F6R1 as seed ortholog is 100%.

Group of orthologs #26. Best score 458 bits
Score difference with first non-orthologous sequence - C.immitis:458 L.interrogans:458

J3KJ15              	100.00%		Q8F9E4              	100.00%
Bootstrap support for J3KJ15 as seed ortholog is 100%.
Bootstrap support for Q8F9E4 as seed ortholog is 100%.

Group of orthologs #27. Best score 454 bits
Score difference with first non-orthologous sequence - C.immitis:454 L.interrogans:454

J3KLD6              	100.00%		Q8F0T4              	100.00%
Bootstrap support for J3KLD6 as seed ortholog is 100%.
Bootstrap support for Q8F0T4 as seed ortholog is 100%.

Group of orthologs #28. Best score 449 bits
Score difference with first non-orthologous sequence - C.immitis:376 L.interrogans:449

J3K207              	100.00%		Q9XD38              	100.00%
Bootstrap support for J3K207 as seed ortholog is 100%.
Bootstrap support for Q9XD38 as seed ortholog is 100%.

Group of orthologs #29. Best score 447 bits
Score difference with first non-orthologous sequence - C.immitis:447 L.interrogans:447

J0HGK5              	100.00%		Q8F149              	100.00%
Bootstrap support for J0HGK5 as seed ortholog is 100%.
Bootstrap support for Q8F149 as seed ortholog is 100%.

Group of orthologs #30. Best score 433 bits
Score difference with first non-orthologous sequence - C.immitis:49 L.interrogans:433

J3K253              	100.00%		Q8F6X6              	100.00%
Bootstrap support for J3K253 as seed ortholog is 81%.
Bootstrap support for Q8F6X6 as seed ortholog is 100%.

Group of orthologs #31. Best score 433 bits
Score difference with first non-orthologous sequence - C.immitis:433 L.interrogans:433

J3K6N0              	100.00%		Q8F3J3              	100.00%
Bootstrap support for J3K6N0 as seed ortholog is 100%.
Bootstrap support for Q8F3J3 as seed ortholog is 100%.

Group of orthologs #32. Best score 433 bits
Score difference with first non-orthologous sequence - C.immitis:35 L.interrogans:433

J3KKB8              	100.00%		Q8EZN3              	100.00%
Bootstrap support for J3KKB8 as seed ortholog is 74%.
Alternative seed ortholog is J3KJS5 (35 bits away from this cluster)
Bootstrap support for Q8EZN3 as seed ortholog is 100%.

Group of orthologs #33. Best score 428 bits
Score difference with first non-orthologous sequence - C.immitis:315 L.interrogans:428

J3KM79              	100.00%		Q8EZY7              	100.00%
Bootstrap support for J3KM79 as seed ortholog is 100%.
Bootstrap support for Q8EZY7 as seed ortholog is 100%.

Group of orthologs #34. Best score 423 bits
Score difference with first non-orthologous sequence - C.immitis:149 L.interrogans:282

J3K9H6              	100.00%		Q8F2N3              	100.00%
Bootstrap support for J3K9H6 as seed ortholog is 99%.
Bootstrap support for Q8F2N3 as seed ortholog is 100%.

Group of orthologs #35. Best score 416 bits
Score difference with first non-orthologous sequence - C.immitis:244 L.interrogans:416

J3KCY2              	100.00%		Q8F7K1              	100.00%
Bootstrap support for J3KCY2 as seed ortholog is 100%.
Bootstrap support for Q8F7K1 as seed ortholog is 100%.

Group of orthologs #36. Best score 402 bits
Score difference with first non-orthologous sequence - C.immitis:63 L.interrogans:402

J3KDN8              	100.00%		Q8F528              	100.00%
Bootstrap support for J3KDN8 as seed ortholog is 92%.
Bootstrap support for Q8F528 as seed ortholog is 100%.

Group of orthologs #37. Best score 401 bits
Score difference with first non-orthologous sequence - C.immitis:401 L.interrogans:401

J3K1X3              	100.00%		Q8CXS7              	100.00%
Bootstrap support for J3K1X3 as seed ortholog is 100%.
Bootstrap support for Q8CXS7 as seed ortholog is 100%.

Group of orthologs #38. Best score 399 bits
Score difference with first non-orthologous sequence - C.immitis:44 L.interrogans:399

J3KHE3              	100.00%		Q8F8G3              	100.00%
Bootstrap support for J3KHE3 as seed ortholog is 85%.
Bootstrap support for Q8F8G3 as seed ortholog is 100%.

Group of orthologs #39. Best score 389 bits
Score difference with first non-orthologous sequence - C.immitis:389 L.interrogans:389

J3K3V9              	100.00%		Q8F4T8              	100.00%
Bootstrap support for J3K3V9 as seed ortholog is 100%.
Bootstrap support for Q8F4T8 as seed ortholog is 100%.

Group of orthologs #40. Best score 389 bits
Score difference with first non-orthologous sequence - C.immitis:389 L.interrogans:389

Q1DTF9              	100.00%		Q8F5H7              	100.00%
Bootstrap support for Q1DTF9 as seed ortholog is 100%.
Bootstrap support for Q8F5H7 as seed ortholog is 100%.

Group of orthologs #41. Best score 383 bits
Score difference with first non-orthologous sequence - C.immitis:271 L.interrogans:383

J0HF35              	100.00%		Q8F4X7              	100.00%
Bootstrap support for J0HF35 as seed ortholog is 100%.
Bootstrap support for Q8F4X7 as seed ortholog is 100%.

Group of orthologs #42. Best score 381 bits
Score difference with first non-orthologous sequence - C.immitis:381 L.interrogans:381

J3KJM2              	100.00%		Q8F7Q4              	100.00%
Bootstrap support for J3KJM2 as seed ortholog is 100%.
Bootstrap support for Q8F7Q4 as seed ortholog is 100%.

Group of orthologs #43. Best score 377 bits
Score difference with first non-orthologous sequence - C.immitis:117 L.interrogans:280

J3KJ50              	100.00%		Q8F4P5              	100.00%
Bootstrap support for J3KJ50 as seed ortholog is 99%.
Bootstrap support for Q8F4P5 as seed ortholog is 100%.

Group of orthologs #44. Best score 376 bits
Score difference with first non-orthologous sequence - C.immitis:376 L.interrogans:376

J3KHH8              	100.00%		Q8F3B3              	100.00%
Bootstrap support for J3KHH8 as seed ortholog is 100%.
Bootstrap support for Q8F3B3 as seed ortholog is 100%.

Group of orthologs #45. Best score 352 bits
Score difference with first non-orthologous sequence - C.immitis:352 L.interrogans:352

J3KBK3              	100.00%		Q8EYP7              	100.00%
Bootstrap support for J3KBK3 as seed ortholog is 100%.
Bootstrap support for Q8EYP7 as seed ortholog is 100%.

Group of orthologs #46. Best score 351 bits
Score difference with first non-orthologous sequence - C.immitis:351 L.interrogans:351

J3K9X0              	100.00%		Q8F7I7              	100.00%
Bootstrap support for J3K9X0 as seed ortholog is 100%.
Bootstrap support for Q8F7I7 as seed ortholog is 100%.

Group of orthologs #47. Best score 344 bits
Score difference with first non-orthologous sequence - C.immitis:120 L.interrogans:263

I9NRK4              	100.00%		Q8F426              	100.00%
Bootstrap support for I9NRK4 as seed ortholog is 99%.
Bootstrap support for Q8F426 as seed ortholog is 100%.

Group of orthologs #48. Best score 344 bits
Score difference with first non-orthologous sequence - C.immitis:344 L.interrogans:344

J3KD22              	100.00%		Q8F9N4              	100.00%
Bootstrap support for J3KD22 as seed ortholog is 100%.
Bootstrap support for Q8F9N4 as seed ortholog is 100%.

Group of orthologs #49. Best score 339 bits
Score difference with first non-orthologous sequence - C.immitis:339 L.interrogans:339

J3KAA3              	100.00%		Q8EZT7              	100.00%
Bootstrap support for J3KAA3 as seed ortholog is 100%.
Bootstrap support for Q8EZT7 as seed ortholog is 100%.

Group of orthologs #50. Best score 332 bits
Score difference with first non-orthologous sequence - C.immitis:332 L.interrogans:332

J3K6E3              	100.00%		Q8F746              	100.00%
Bootstrap support for J3K6E3 as seed ortholog is 100%.
Bootstrap support for Q8F746 as seed ortholog is 100%.

Group of orthologs #51. Best score 328 bits
Score difference with first non-orthologous sequence - C.immitis:328 L.interrogans:328

J3K5D2              	100.00%		Q8EX62              	100.00%
Bootstrap support for J3K5D2 as seed ortholog is 100%.
Bootstrap support for Q8EX62 as seed ortholog is 100%.

Group of orthologs #52. Best score 328 bits
Score difference with first non-orthologous sequence - C.immitis:328 L.interrogans:328

J3KBE4              	100.00%		Q8F738              	100.00%
Bootstrap support for J3KBE4 as seed ortholog is 100%.
Bootstrap support for Q8F738 as seed ortholog is 100%.

Group of orthologs #53. Best score 326 bits
Score difference with first non-orthologous sequence - C.immitis:326 L.interrogans:326

I9XM91              	100.00%		Q8F5H8              	100.00%
Bootstrap support for I9XM91 as seed ortholog is 100%.
Bootstrap support for Q8F5H8 as seed ortholog is 100%.

Group of orthologs #54. Best score 325 bits
Score difference with first non-orthologous sequence - C.immitis:325 L.interrogans:325

J3KI59              	100.00%		Q8F6A0              	100.00%
J3KKJ1              	36.72%		
Bootstrap support for J3KI59 as seed ortholog is 100%.
Bootstrap support for Q8F6A0 as seed ortholog is 100%.

Group of orthologs #55. Best score 324 bits
Score difference with first non-orthologous sequence - C.immitis:324 L.interrogans:324

J3K7S6              	100.00%		Q8F747              	100.00%
Bootstrap support for J3K7S6 as seed ortholog is 100%.
Bootstrap support for Q8F747 as seed ortholog is 100%.

Group of orthologs #56. Best score 319 bits
Score difference with first non-orthologous sequence - C.immitis:135 L.interrogans:319

J3KHA7              	100.00%		Q8F7S5              	100.00%
Bootstrap support for J3KHA7 as seed ortholog is 99%.
Bootstrap support for Q8F7S5 as seed ortholog is 100%.

Group of orthologs #57. Best score 318 bits
Score difference with first non-orthologous sequence - C.immitis:115 L.interrogans:251

J3K671              	100.00%		Q8F4N1              	100.00%
Bootstrap support for J3K671 as seed ortholog is 99%.
Bootstrap support for Q8F4N1 as seed ortholog is 100%.

Group of orthologs #58. Best score 316 bits
Score difference with first non-orthologous sequence - C.immitis:316 L.interrogans:316

J3KJA6              	100.00%		Q8F4G5              	100.00%
Bootstrap support for J3KJA6 as seed ortholog is 100%.
Bootstrap support for Q8F4G5 as seed ortholog is 100%.

Group of orthologs #59. Best score 314 bits
Score difference with first non-orthologous sequence - C.immitis:314 L.interrogans:246

J3KED5              	100.00%		Q8F7Q2              	100.00%
Bootstrap support for J3KED5 as seed ortholog is 100%.
Bootstrap support for Q8F7Q2 as seed ortholog is 100%.

Group of orthologs #60. Best score 314 bits
Score difference with first non-orthologous sequence - C.immitis:314 L.interrogans:314

J3KK20              	100.00%		Q8F068              	100.00%
Bootstrap support for J3KK20 as seed ortholog is 100%.
Bootstrap support for Q8F068 as seed ortholog is 100%.

Group of orthologs #61. Best score 311 bits
Score difference with first non-orthologous sequence - C.immitis:311 L.interrogans:311

J0HHS0              	100.00%		Q8F4F4              	100.00%
Bootstrap support for J0HHS0 as seed ortholog is 100%.
Bootstrap support for Q8F4F4 as seed ortholog is 100%.

Group of orthologs #62. Best score 307 bits
Score difference with first non-orthologous sequence - C.immitis:307 L.interrogans:307

J3KB55              	100.00%		Q8F0S3              	100.00%
J3K6Z9              	13.12%		
J3KBI0              	8.63%		
Bootstrap support for J3KB55 as seed ortholog is 100%.
Bootstrap support for Q8F0S3 as seed ortholog is 100%.

Group of orthologs #63. Best score 307 bits
Score difference with first non-orthologous sequence - C.immitis:307 L.interrogans:307

J3K4L0              	100.00%		Q8EXG1              	100.00%
Bootstrap support for J3K4L0 as seed ortholog is 100%.
Bootstrap support for Q8EXG1 as seed ortholog is 100%.

Group of orthologs #64. Best score 292 bits
Score difference with first non-orthologous sequence - C.immitis:292 L.interrogans:292

I9XL53              	100.00%		Q8EXF1              	100.00%
Bootstrap support for I9XL53 as seed ortholog is 100%.
Bootstrap support for Q8EXF1 as seed ortholog is 100%.

Group of orthologs #65. Best score 291 bits
Score difference with first non-orthologous sequence - C.immitis:131 L.interrogans:291

J3K6S7              	100.00%		Q8F290              	100.00%
Bootstrap support for J3K6S7 as seed ortholog is 99%.
Bootstrap support for Q8F290 as seed ortholog is 100%.

Group of orthologs #66. Best score 290 bits
Score difference with first non-orthologous sequence - C.immitis:164 L.interrogans:220

J3K1N8              	100.00%		Q8F5K1              	100.00%
Bootstrap support for J3K1N8 as seed ortholog is 99%.
Bootstrap support for Q8F5K1 as seed ortholog is 100%.

Group of orthologs #67. Best score 289 bits
Score difference with first non-orthologous sequence - C.immitis:119 L.interrogans:289

J0HF14              	100.00%		Q8F0N1              	100.00%
Bootstrap support for J0HF14 as seed ortholog is 99%.
Bootstrap support for Q8F0N1 as seed ortholog is 100%.

Group of orthologs #68. Best score 286 bits
Score difference with first non-orthologous sequence - C.immitis:286 L.interrogans:286

J3K0E7              	100.00%		Q8F3W6              	100.00%
Bootstrap support for J3K0E7 as seed ortholog is 100%.
Bootstrap support for Q8F3W6 as seed ortholog is 100%.

Group of orthologs #69. Best score 286 bits
Score difference with first non-orthologous sequence - C.immitis:101 L.interrogans:35

J3KGG7              	100.00%		Q8F370              	100.00%
Bootstrap support for J3KGG7 as seed ortholog is 99%.
Bootstrap support for Q8F370 as seed ortholog is 76%.

Group of orthologs #70. Best score 284 bits
Score difference with first non-orthologous sequence - C.immitis:143 L.interrogans:284

J3K659              	100.00%		Q8F3A1              	100.00%
Bootstrap support for J3K659 as seed ortholog is 99%.
Bootstrap support for Q8F3A1 as seed ortholog is 100%.

Group of orthologs #71. Best score 283 bits
Score difference with first non-orthologous sequence - C.immitis:283 L.interrogans:283

J3K4V5              	100.00%		Q8F0S2              	100.00%
J3K8D2              	16.64%		
Bootstrap support for J3K4V5 as seed ortholog is 100%.
Bootstrap support for Q8F0S2 as seed ortholog is 100%.

Group of orthologs #72. Best score 282 bits
Score difference with first non-orthologous sequence - C.immitis:282 L.interrogans:282

J3KJL3              	100.00%		Q8CXU0              	100.00%
Bootstrap support for J3KJL3 as seed ortholog is 100%.
Bootstrap support for Q8CXU0 as seed ortholog is 100%.

Group of orthologs #73. Best score 279 bits
Score difference with first non-orthologous sequence - C.immitis:12 L.interrogans:279

J3KL42              	100.00%		Q8F496              	100.00%
Bootstrap support for J3KL42 as seed ortholog is 49%.
Alternative seed ortholog is J3K1M8 (12 bits away from this cluster)
Bootstrap support for Q8F496 as seed ortholog is 100%.

Group of orthologs #74. Best score 278 bits
Score difference with first non-orthologous sequence - C.immitis:124 L.interrogans:278

J3KAU0              	100.00%		P24015              	100.00%
J3K681              	21.33%		
Bootstrap support for J3KAU0 as seed ortholog is 99%.
Bootstrap support for P24015 as seed ortholog is 100%.

Group of orthologs #75. Best score 277 bits
Score difference with first non-orthologous sequence - C.immitis:277 L.interrogans:277

J3KGX9              	100.00%		P41394              	100.00%
Bootstrap support for J3KGX9 as seed ortholog is 100%.
Bootstrap support for P41394 as seed ortholog is 100%.

Group of orthologs #76. Best score 271 bits
Score difference with first non-orthologous sequence - C.immitis:271 L.interrogans:271

J3KJ96              	100.00%		Q8CXR2              	100.00%
Bootstrap support for J3KJ96 as seed ortholog is 100%.
Bootstrap support for Q8CXR2 as seed ortholog is 100%.

Group of orthologs #77. Best score 270 bits
Score difference with first non-orthologous sequence - C.immitis:270 L.interrogans:270

J3K9K5              	100.00%		Q8F4I0              	100.00%
Bootstrap support for J3K9K5 as seed ortholog is 100%.
Bootstrap support for Q8F4I0 as seed ortholog is 100%.

Group of orthologs #78. Best score 268 bits
Score difference with first non-orthologous sequence - C.immitis:268 L.interrogans:268

J3K393              	100.00%		Q8EYM3              	100.00%
Bootstrap support for J3K393 as seed ortholog is 100%.
Bootstrap support for Q8EYM3 as seed ortholog is 100%.

Group of orthologs #79. Best score 265 bits
Score difference with first non-orthologous sequence - C.immitis:100 L.interrogans:265

I9NS04              	100.00%		Q8F4N2              	100.00%
Bootstrap support for I9NS04 as seed ortholog is 98%.
Bootstrap support for Q8F4N2 as seed ortholog is 100%.

Group of orthologs #80. Best score 265 bits
Score difference with first non-orthologous sequence - C.immitis:34 L.interrogans:62

J3KLQ2              	100.00%		Q8F003              	100.00%
Bootstrap support for J3KLQ2 as seed ortholog is 80%.
Bootstrap support for Q8F003 as seed ortholog is 97%.

Group of orthologs #81. Best score 265 bits
Score difference with first non-orthologous sequence - C.immitis:265 L.interrogans:265

J3KJQ1              	100.00%		Q8F421              	100.00%
Bootstrap support for J3KJQ1 as seed ortholog is 100%.
Bootstrap support for Q8F421 as seed ortholog is 100%.

Group of orthologs #82. Best score 263 bits
Score difference with first non-orthologous sequence - C.immitis:263 L.interrogans:263

I9NSN2              	100.00%		Q8F3S1              	100.00%
Bootstrap support for I9NSN2 as seed ortholog is 100%.
Bootstrap support for Q8F3S1 as seed ortholog is 100%.

Group of orthologs #83. Best score 260 bits
Score difference with first non-orthologous sequence - C.immitis:260 L.interrogans:204

J3K070              	100.00%		Q8EZ92              	100.00%
Bootstrap support for J3K070 as seed ortholog is 100%.
Bootstrap support for Q8EZ92 as seed ortholog is 100%.

Group of orthologs #84. Best score 260 bits
Score difference with first non-orthologous sequence - C.immitis:207 L.interrogans:260

I9XK07              	100.00%		Q8F4B2              	100.00%
Bootstrap support for I9XK07 as seed ortholog is 100%.
Bootstrap support for Q8F4B2 as seed ortholog is 100%.

Group of orthologs #85. Best score 260 bits
Score difference with first non-orthologous sequence - C.immitis:260 L.interrogans:91

J3K8C0              	100.00%		Q8F353              	100.00%
Bootstrap support for J3K8C0 as seed ortholog is 100%.
Bootstrap support for Q8F353 as seed ortholog is 84%.

Group of orthologs #86. Best score 259 bits
Score difference with first non-orthologous sequence - C.immitis:259 L.interrogans:259

J3KKJ3              	100.00%		P59173              	100.00%
Bootstrap support for J3KKJ3 as seed ortholog is 100%.
Bootstrap support for P59173 as seed ortholog is 100%.

Group of orthologs #87. Best score 258 bits
Score difference with first non-orthologous sequence - C.immitis:258 L.interrogans:258

J3KBT8              	100.00%		Q8EZN0              	100.00%
J3KJK0              	9.41%		
J3K6J7              	6.17%		
Bootstrap support for J3KBT8 as seed ortholog is 100%.
Bootstrap support for Q8EZN0 as seed ortholog is 100%.

Group of orthologs #88. Best score 257 bits
Score difference with first non-orthologous sequence - C.immitis:257 L.interrogans:257

J3KGG6              	100.00%		Q8F4E3              	100.00%
Bootstrap support for J3KGG6 as seed ortholog is 100%.
Bootstrap support for Q8F4E3 as seed ortholog is 100%.

Group of orthologs #89. Best score 254 bits
Score difference with first non-orthologous sequence - C.immitis:167 L.interrogans:63

J3K974              	100.00%		Q8F601              	100.00%
J3KLI4              	51.85%		
Bootstrap support for J3K974 as seed ortholog is 99%.
Bootstrap support for Q8F601 as seed ortholog is 87%.

Group of orthologs #90. Best score 254 bits
Score difference with first non-orthologous sequence - C.immitis:93 L.interrogans:254

J3K773              	100.00%		Q8F4D6              	100.00%
Bootstrap support for J3K773 as seed ortholog is 97%.
Bootstrap support for Q8F4D6 as seed ortholog is 100%.

Group of orthologs #91. Best score 252 bits
Score difference with first non-orthologous sequence - C.immitis:252 L.interrogans:252

J3K415              	100.00%		Q8F2A8              	100.00%
Bootstrap support for J3K415 as seed ortholog is 100%.
Bootstrap support for Q8F2A8 as seed ortholog is 100%.

Group of orthologs #92. Best score 246 bits
Score difference with first non-orthologous sequence - C.immitis:246 L.interrogans:246

J3K079              	100.00%		Q8EYX2              	100.00%
Bootstrap support for J3K079 as seed ortholog is 100%.
Bootstrap support for Q8EYX2 as seed ortholog is 100%.

Group of orthologs #93. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:245 L.interrogans:245

J3K0G8              	100.00%		Q8EXA3              	100.00%
Bootstrap support for J3K0G8 as seed ortholog is 100%.
Bootstrap support for Q8EXA3 as seed ortholog is 100%.

Group of orthologs #94. Best score 244 bits
Score difference with first non-orthologous sequence - C.immitis:35 L.interrogans:244

J3K5M4              	100.00%		P61441              	100.00%
Bootstrap support for J3K5M4 as seed ortholog is 80%.
Bootstrap support for P61441 as seed ortholog is 100%.

Group of orthologs #95. Best score 244 bits
Score difference with first non-orthologous sequence - C.immitis:244 L.interrogans:244

J3K6I5              	100.00%		Q8CXS3              	100.00%
Bootstrap support for J3K6I5 as seed ortholog is 100%.
Bootstrap support for Q8CXS3 as seed ortholog is 100%.

Group of orthologs #96. Best score 243 bits
Score difference with first non-orthologous sequence - C.immitis:243 L.interrogans:243

J3KDJ3              	100.00%		P94872              	100.00%
Bootstrap support for J3KDJ3 as seed ortholog is 100%.
Bootstrap support for P94872 as seed ortholog is 100%.

Group of orthologs #97. Best score 242 bits
Score difference with first non-orthologous sequence - C.immitis:242 L.interrogans:242

Q1DUF5              	100.00%		Q8F6R2              	100.00%
Bootstrap support for Q1DUF5 as seed ortholog is 100%.
Bootstrap support for Q8F6R2 as seed ortholog is 100%.

Group of orthologs #98. Best score 240 bits
Score difference with first non-orthologous sequence - C.immitis:176 L.interrogans:240

J3K050              	100.00%		Q8F0D1              	100.00%
J3KJS6              	47.85%		
Bootstrap support for J3K050 as seed ortholog is 100%.
Bootstrap support for Q8F0D1 as seed ortholog is 100%.

Group of orthologs #99. Best score 240 bits
Score difference with first non-orthologous sequence - C.immitis:240 L.interrogans:240

I9XK40              	100.00%		Q8F148              	100.00%
Bootstrap support for I9XK40 as seed ortholog is 100%.
Bootstrap support for Q8F148 as seed ortholog is 100%.

Group of orthologs #100. Best score 238 bits
Score difference with first non-orthologous sequence - C.immitis:12 L.interrogans:238

Q1DP69              	100.00%		Q8F0Q7              	100.00%
Q1DJF0              	13.61%		
Q1DZK8              	6.07%		
Bootstrap support for Q1DP69 as seed ortholog is 66%.
Alternative seed ortholog is Q1E2B2 (12 bits away from this cluster)
Bootstrap support for Q8F0Q7 as seed ortholog is 100%.

Group of orthologs #101. Best score 234 bits
Score difference with first non-orthologous sequence - C.immitis:234 L.interrogans:234

J3KFM2              	100.00%		Q8F7U7              	100.00%
Bootstrap support for J3KFM2 as seed ortholog is 100%.
Bootstrap support for Q8F7U7 as seed ortholog is 100%.

Group of orthologs #102. Best score 233 bits
Score difference with first non-orthologous sequence - C.immitis:33 L.interrogans:233

J3KFM0              	100.00%		P24087              	100.00%
Bootstrap support for J3KFM0 as seed ortholog is 78%.
Bootstrap support for P24087 as seed ortholog is 100%.

Group of orthologs #103. Best score 232 bits
Score difference with first non-orthologous sequence - C.immitis:148 L.interrogans:232

J0HHA3              	100.00%		Q8F4G9              	100.00%
Bootstrap support for J0HHA3 as seed ortholog is 99%.
Bootstrap support for Q8F4G9 as seed ortholog is 100%.

Group of orthologs #104. Best score 232 bits
Score difference with first non-orthologous sequence - C.immitis:232 L.interrogans:232

J3K3R0              	100.00%		Q8EZQ1              	100.00%
Bootstrap support for J3K3R0 as seed ortholog is 100%.
Bootstrap support for Q8EZQ1 as seed ortholog is 100%.

Group of orthologs #105. Best score 230 bits
Score difference with first non-orthologous sequence - C.immitis:230 L.interrogans:96

J3KEL0              	100.00%		Q8EXZ9              	100.00%
Bootstrap support for J3KEL0 as seed ortholog is 100%.
Bootstrap support for Q8EXZ9 as seed ortholog is 99%.

Group of orthologs #106. Best score 227 bits
Score difference with first non-orthologous sequence - C.immitis:94 L.interrogans:227

J3K3K5              	100.00%		Q8EZD6              	100.00%
Bootstrap support for J3K3K5 as seed ortholog is 96%.
Bootstrap support for Q8EZD6 as seed ortholog is 100%.

Group of orthologs #107. Best score 226 bits
Score difference with first non-orthologous sequence - C.immitis:138 L.interrogans:226

J3K7D8              	100.00%		Q8EYG9              	100.00%
                    	       		Q8F1H9              	8.25%
Bootstrap support for J3K7D8 as seed ortholog is 99%.
Bootstrap support for Q8EYG9 as seed ortholog is 100%.

Group of orthologs #108. Best score 225 bits
Score difference with first non-orthologous sequence - C.immitis:89 L.interrogans:225

J3KCF2              	100.00%		Q8F0Y5              	100.00%
Bootstrap support for J3KCF2 as seed ortholog is 99%.
Bootstrap support for Q8F0Y5 as seed ortholog is 100%.

Group of orthologs #109. Best score 225 bits
Score difference with first non-orthologous sequence - C.immitis:91 L.interrogans:225

J3KLS7              	100.00%		Q8F4N0              	100.00%
Bootstrap support for J3KLS7 as seed ortholog is 99%.
Bootstrap support for Q8F4N0 as seed ortholog is 100%.

Group of orthologs #110. Best score 224 bits
Score difference with first non-orthologous sequence - C.immitis:123 L.interrogans:224

J3KDH1              	100.00%		Q8F8V2              	100.00%
J3K7X3              	12.87%		
Bootstrap support for J3KDH1 as seed ortholog is 99%.
Bootstrap support for Q8F8V2 as seed ortholog is 100%.

Group of orthologs #111. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:65 L.interrogans:116

J3K9H4              	100.00%		Q8F8Y4              	100.00%
J3KB82              	100.00%		
Bootstrap support for J3K9H4 as seed ortholog is 95%.
Bootstrap support for J3KB82 as seed ortholog is 96%.
Bootstrap support for Q8F8Y4 as seed ortholog is 99%.

Group of orthologs #112. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:15 L.interrogans:223

J3KE99              	100.00%		Q8F1G4              	100.00%
Bootstrap support for J3KE99 as seed ortholog is 67%.
Alternative seed ortholog is J3K7K0 (15 bits away from this cluster)
Bootstrap support for Q8F1G4 as seed ortholog is 100%.

Group of orthologs #113. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:50 L.interrogans:223

J3KIV6              	100.00%		Q8F2T1              	100.00%
Bootstrap support for J3KIV6 as seed ortholog is 85%.
Bootstrap support for Q8F2T1 as seed ortholog is 100%.

Group of orthologs #114. Best score 221 bits
Score difference with first non-orthologous sequence - C.immitis:147 L.interrogans:221

J3K6P1              	100.00%		Q8F491              	100.00%
Bootstrap support for J3K6P1 as seed ortholog is 99%.
Bootstrap support for Q8F491 as seed ortholog is 100%.

Group of orthologs #115. Best score 221 bits
Score difference with first non-orthologous sequence - C.immitis:221 L.interrogans:75

J3KL04              	100.00%		Q8F9S6              	100.00%
Bootstrap support for J3KL04 as seed ortholog is 100%.
Bootstrap support for Q8F9S6 as seed ortholog is 97%.

Group of orthologs #116. Best score 218 bits
Score difference with first non-orthologous sequence - C.immitis:218 L.interrogans:218

J3KH31              	100.00%		Q8F3V7              	100.00%
Bootstrap support for J3KH31 as seed ortholog is 100%.
Bootstrap support for Q8F3V7 as seed ortholog is 100%.

Group of orthologs #117. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 L.interrogans:217

J3KC75              	100.00%		Q8F9D9              	100.00%
Bootstrap support for J3KC75 as seed ortholog is 100%.
Bootstrap support for Q8F9D9 as seed ortholog is 100%.

Group of orthologs #118. Best score 216 bits
Score difference with first non-orthologous sequence - C.immitis:216 L.interrogans:216

J3KAN7              	100.00%		Q8F1Y8              	100.00%
Bootstrap support for J3KAN7 as seed ortholog is 100%.
Bootstrap support for Q8F1Y8 as seed ortholog is 100%.

Group of orthologs #119. Best score 214 bits
Score difference with first non-orthologous sequence - C.immitis:214 L.interrogans:214

J3KM68              	100.00%		Q8F930              	100.00%
Bootstrap support for J3KM68 as seed ortholog is 100%.
Bootstrap support for Q8F930 as seed ortholog is 100%.

Group of orthologs #120. Best score 213 bits
Score difference with first non-orthologous sequence - C.immitis:213 L.interrogans:213

J3K851              	100.00%		Q8EYV8              	100.00%
Bootstrap support for J3K851 as seed ortholog is 100%.
Bootstrap support for Q8EYV8 as seed ortholog is 100%.

Group of orthologs #121. Best score 212 bits
Score difference with first non-orthologous sequence - C.immitis:212 L.interrogans:212

J3KF62              	100.00%		Q8F5L4              	100.00%
Bootstrap support for J3KF62 as seed ortholog is 100%.
Bootstrap support for Q8F5L4 as seed ortholog is 100%.

Group of orthologs #122. Best score 211 bits
Score difference with first non-orthologous sequence - C.immitis:211 L.interrogans:211

J3KBL7              	100.00%		Q8F6Y5              	100.00%
                    	       		Q8F1M0              	14.79%
                    	       		Q8F687              	13.28%
Bootstrap support for J3KBL7 as seed ortholog is 100%.
Bootstrap support for Q8F6Y5 as seed ortholog is 100%.

Group of orthologs #123. Best score 211 bits
Score difference with first non-orthologous sequence - C.immitis:31 L.interrogans:211

Q1E9F1              	100.00%		Q8F522              	100.00%
Bootstrap support for Q1E9F1 as seed ortholog is 75%.
Bootstrap support for Q8F522 as seed ortholog is 100%.

Group of orthologs #124. Best score 209 bits
Score difference with first non-orthologous sequence - C.immitis:209 L.interrogans:209

J3K8Y4              	100.00%		Q8EYG1              	100.00%
Bootstrap support for J3K8Y4 as seed ortholog is 100%.
Bootstrap support for Q8EYG1 as seed ortholog is 100%.

Group of orthologs #125. Best score 209 bits
Score difference with first non-orthologous sequence - C.immitis:209 L.interrogans:209

J3KFR6              	100.00%		Q8F8Y7              	100.00%
Bootstrap support for J3KFR6 as seed ortholog is 100%.
Bootstrap support for Q8F8Y7 as seed ortholog is 100%.

Group of orthologs #126. Best score 209 bits
Score difference with first non-orthologous sequence - C.immitis:99 L.interrogans:209

J3KJY5              	100.00%		Q9XD33              	100.00%
Bootstrap support for J3KJY5 as seed ortholog is 99%.
Bootstrap support for Q9XD33 as seed ortholog is 100%.

Group of orthologs #127. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:207 L.interrogans:207

J3KBE0              	100.00%		Q8F7U0              	100.00%
Bootstrap support for J3KBE0 as seed ortholog is 100%.
Bootstrap support for Q8F7U0 as seed ortholog is 100%.

Group of orthologs #128. Best score 206 bits
Score difference with first non-orthologous sequence - C.immitis:99 L.interrogans:206

J3KFB7              	100.00%		Q8F6X4              	100.00%
Bootstrap support for J3KFB7 as seed ortholog is 98%.
Bootstrap support for Q8F6X4 as seed ortholog is 100%.

Group of orthologs #129. Best score 204 bits
Score difference with first non-orthologous sequence - C.immitis:153 L.interrogans:109

J3KAI8              	100.00%		Q8F9Z5              	100.00%
Bootstrap support for J3KAI8 as seed ortholog is 99%.
Bootstrap support for Q8F9Z5 as seed ortholog is 99%.

Group of orthologs #130. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:120 L.interrogans:203

J3KD63              	100.00%		Q8F8D2              	100.00%
Bootstrap support for J3KD63 as seed ortholog is 99%.
Bootstrap support for Q8F8D2 as seed ortholog is 100%.

Group of orthologs #131. Best score 200 bits
Score difference with first non-orthologous sequence - C.immitis:16 L.interrogans:200

J3K0T8              	100.00%		Q8F1J1              	100.00%
J3KBV6              	27.71%		
Bootstrap support for J3K0T8 as seed ortholog is 67%.
Alternative seed ortholog is J3K953 (16 bits away from this cluster)
Bootstrap support for Q8F1J1 as seed ortholog is 100%.

Group of orthologs #132. Best score 200 bits
Score difference with first non-orthologous sequence - C.immitis:200 L.interrogans:102

J3KL55              	100.00%		Q8EZJ8              	100.00%
Bootstrap support for J3KL55 as seed ortholog is 100%.
Bootstrap support for Q8EZJ8 as seed ortholog is 99%.

Group of orthologs #133. Best score 199 bits
Score difference with first non-orthologous sequence - C.immitis:60 L.interrogans:199

J3K8I5              	100.00%		Q8EY78              	100.00%
Bootstrap support for J3K8I5 as seed ortholog is 90%.
Bootstrap support for Q8EY78 as seed ortholog is 100%.

Group of orthologs #134. Best score 199 bits
Score difference with first non-orthologous sequence - C.immitis:199 L.interrogans:199

J3KGZ6              	100.00%		Q8F0I0              	100.00%
Bootstrap support for J3KGZ6 as seed ortholog is 100%.
Bootstrap support for Q8F0I0 as seed ortholog is 100%.

Group of orthologs #135. Best score 198 bits
Score difference with first non-orthologous sequence - C.immitis:198 L.interrogans:53

J3K4E9              	100.00%		Q8F352              	100.00%
Bootstrap support for J3K4E9 as seed ortholog is 100%.
Bootstrap support for Q8F352 as seed ortholog is 98%.

Group of orthologs #136. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:195 L.interrogans:195

J3KIV3              	100.00%		Q8EZ98              	100.00%
Bootstrap support for J3KIV3 as seed ortholog is 100%.
Bootstrap support for Q8EZ98 as seed ortholog is 100%.

Group of orthologs #137. Best score 193 bits
Score difference with first non-orthologous sequence - C.immitis:134 L.interrogans:193

J3KL11              	100.00%		Q8F9S7              	100.00%
J3KAZ2              	13.13%		
Bootstrap support for J3KL11 as seed ortholog is 99%.
Bootstrap support for Q8F9S7 as seed ortholog is 100%.

Group of orthologs #138. Best score 193 bits
Score difference with first non-orthologous sequence - C.immitis:193 L.interrogans:193

J3K3P2              	100.00%		Q8EY45              	100.00%
Bootstrap support for J3K3P2 as seed ortholog is 100%.
Bootstrap support for Q8EY45 as seed ortholog is 100%.

Group of orthologs #139. Best score 192 bits
Score difference with first non-orthologous sequence - C.immitis:26 L.interrogans:140

J3KJB3              	100.00%		Q8F3R3              	100.00%
Bootstrap support for J3KJB3 as seed ortholog is 77%.
Bootstrap support for Q8F3R3 as seed ortholog is 100%.

Group of orthologs #140. Best score 190 bits
Score difference with first non-orthologous sequence - C.immitis:41 L.interrogans:190

J3K4W1              	100.00%		Q8F9T4              	100.00%
J3K8F0              	5.15%		
Bootstrap support for J3K4W1 as seed ortholog is 41%.
Alternative seed ortholog is J3KJF9 (41 bits away from this cluster)
Bootstrap support for Q8F9T4 as seed ortholog is 100%.

Group of orthologs #141. Best score 188 bits
Score difference with first non-orthologous sequence - C.immitis:188 L.interrogans:105

J3KLL0              	100.00%		Q8F124              	100.00%
                    	       		Q8F0D8              	26.61%
Bootstrap support for J3KLL0 as seed ortholog is 100%.
Bootstrap support for Q8F124 as seed ortholog is 99%.

Group of orthologs #142. Best score 187 bits
Score difference with first non-orthologous sequence - C.immitis:187 L.interrogans:108

J3KHR0              	100.00%		Q8EZA7              	100.00%
Bootstrap support for J3KHR0 as seed ortholog is 100%.
Bootstrap support for Q8EZA7 as seed ortholog is 99%.

Group of orthologs #143. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:183 L.interrogans:183

J3K9Z2              	100.00%		Q8F074              	100.00%
J3KID0              	36.94%		
Bootstrap support for J3K9Z2 as seed ortholog is 100%.
Bootstrap support for Q8F074 as seed ortholog is 100%.

Group of orthologs #144. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:183 L.interrogans:183

J3K5C0              	100.00%		Q8F3E9              	100.00%
Bootstrap support for J3K5C0 as seed ortholog is 100%.
Bootstrap support for Q8F3E9 as seed ortholog is 100%.

Group of orthologs #145. Best score 179 bits
Score difference with first non-orthologous sequence - C.immitis:92 L.interrogans:179

J3K5K4              	100.00%		Q8F8Q2              	100.00%
Bootstrap support for J3K5K4 as seed ortholog is 99%.
Bootstrap support for Q8F8Q2 as seed ortholog is 100%.

Group of orthologs #146. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:94 L.interrogans:173

J3K2W8              	100.00%		Q8F5I5              	100.00%
Bootstrap support for J3K2W8 as seed ortholog is 99%.
Bootstrap support for Q8F5I5 as seed ortholog is 100%.

Group of orthologs #147. Best score 170 bits
Score difference with first non-orthologous sequence - C.immitis:170 L.interrogans:170

J3K703              	100.00%		Q8EYH2              	100.00%
Bootstrap support for J3K703 as seed ortholog is 100%.
Bootstrap support for Q8EYH2 as seed ortholog is 100%.

Group of orthologs #148. Best score 170 bits
Score difference with first non-orthologous sequence - C.immitis:93 L.interrogans:170

J3K9W3              	100.00%		Q8F2U4              	100.00%
Bootstrap support for J3K9W3 as seed ortholog is 98%.
Bootstrap support for Q8F2U4 as seed ortholog is 100%.

Group of orthologs #149. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 L.interrogans:163

Q96WZ1              	100.00%		Q8EYJ5              	100.00%
J3KIY7              	17.06%		
J3KJB0              	15.89%		
Bootstrap support for Q96WZ1 as seed ortholog is 100%.
Bootstrap support for Q8EYJ5 as seed ortholog is 100%.

Group of orthologs #150. Best score 162 bits
Score difference with first non-orthologous sequence - C.immitis:41 L.interrogans:71

J3KLV4              	100.00%		Q8F4V6              	100.00%
Bootstrap support for J3KLV4 as seed ortholog is 85%.
Bootstrap support for Q8F4V6 as seed ortholog is 95%.

Group of orthologs #151. Best score 161 bits
Score difference with first non-orthologous sequence - C.immitis:20 L.interrogans:161

I9NNB3              	100.00%		Q8F6V2              	100.00%
Bootstrap support for I9NNB3 as seed ortholog is 73%.
Alternative seed ortholog is J3KC71 (20 bits away from this cluster)
Bootstrap support for Q8F6V2 as seed ortholog is 100%.

Group of orthologs #152. Best score 161 bits
Score difference with first non-orthologous sequence - C.immitis:161 L.interrogans:161

J3KM71              	100.00%		P97043              	100.00%
Bootstrap support for J3KM71 as seed ortholog is 100%.
Bootstrap support for P97043 as seed ortholog is 100%.

Group of orthologs #153. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 L.interrogans:160

J3K3N0              	100.00%		Q8F3Y8              	100.00%
Bootstrap support for J3K3N0 as seed ortholog is 100%.
Bootstrap support for Q8F3Y8 as seed ortholog is 100%.

Group of orthologs #154. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:32 L.interrogans:160

J3K8R9              	100.00%		Q8F319              	100.00%
Bootstrap support for J3K8R9 as seed ortholog is 77%.
Bootstrap support for Q8F319 as seed ortholog is 100%.

Group of orthologs #155. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:31 L.interrogans:160

J3KAK1              	100.00%		Q8F499              	100.00%
Bootstrap support for J3KAK1 as seed ortholog is 77%.
Bootstrap support for Q8F499 as seed ortholog is 100%.

Group of orthologs #156. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 L.interrogans:159

J3K182              	100.00%		Q8F7Q0              	100.00%
J3KDJ8              	41.90%		
Bootstrap support for J3K182 as seed ortholog is 100%.
Bootstrap support for Q8F7Q0 as seed ortholog is 100%.

Group of orthologs #157. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 L.interrogans:52

J3KHV4              	100.00%		Q8F650              	100.00%
Bootstrap support for J3KHV4 as seed ortholog is 100%.
Bootstrap support for Q8F650 as seed ortholog is 90%.

Group of orthologs #158. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:9 L.interrogans:158

J3K7T7              	100.00%		Q8F4A1              	100.00%
Bootstrap support for J3K7T7 as seed ortholog is 56%.
Alternative seed ortholog is J3KJ61 (9 bits away from this cluster)
Bootstrap support for Q8F4A1 as seed ortholog is 100%.

Group of orthologs #159. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 L.interrogans:156

J3K518              	100.00%		Q8F9R1              	100.00%
Bootstrap support for J3K518 as seed ortholog is 100%.
Bootstrap support for Q8F9R1 as seed ortholog is 100%.

Group of orthologs #160. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 L.interrogans:156

J3KK01              	100.00%		Q8F701              	100.00%
Bootstrap support for J3KK01 as seed ortholog is 100%.
Bootstrap support for Q8F701 as seed ortholog is 100%.

Group of orthologs #161. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:154 L.interrogans:154

J3KJ59              	100.00%		Q8F498              	100.00%
Bootstrap support for J3KJ59 as seed ortholog is 100%.
Bootstrap support for Q8F498 as seed ortholog is 100%.

Group of orthologs #162. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:40 L.interrogans:151

J3K3K3              	100.00%		Q8EZ83              	100.00%
Bootstrap support for J3K3K3 as seed ortholog is 81%.
Bootstrap support for Q8EZ83 as seed ortholog is 100%.

Group of orthologs #163. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:151 L.interrogans:151

J3KHV3              	100.00%		Q8F679              	100.00%
Bootstrap support for J3KHV3 as seed ortholog is 100%.
Bootstrap support for Q8F679 as seed ortholog is 100%.

Group of orthologs #164. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:108 L.interrogans:149

J3K243              	100.00%		Q8EY21              	100.00%
J3KHS1              	9.23%		
J3KAY2              	7.12%		
Bootstrap support for J3K243 as seed ortholog is 98%.
Bootstrap support for Q8EY21 as seed ortholog is 100%.

Group of orthologs #165. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:149 L.interrogans:149

J3KG61              	100.00%		Q8EYT0              	100.00%
Bootstrap support for J3KG61 as seed ortholog is 100%.
Bootstrap support for Q8EYT0 as seed ortholog is 100%.

Group of orthologs #166. Best score 148 bits
Score difference with first non-orthologous sequence - C.immitis:148 L.interrogans:148

J3KLB8              	100.00%		Q8F7W4              	100.00%
J3KAG3              	30.67%		
J3KDT7              	9.23%		
J3K9T5              	7.36%		
J3KJN6              	6.89%		
Bootstrap support for J3KLB8 as seed ortholog is 100%.
Bootstrap support for Q8F7W4 as seed ortholog is 100%.

Group of orthologs #167. Best score 148 bits
Score difference with first non-orthologous sequence - C.immitis:148 L.interrogans:148

J3K877              	100.00%		Q8F6C0              	100.00%
Bootstrap support for J3K877 as seed ortholog is 100%.
Bootstrap support for Q8F6C0 as seed ortholog is 100%.

Group of orthologs #168. Best score 148 bits
Score difference with first non-orthologous sequence - C.immitis:148 L.interrogans:148

J3K9Y1              	100.00%		Q8F935              	100.00%
Bootstrap support for J3K9Y1 as seed ortholog is 100%.
Bootstrap support for Q8F935 as seed ortholog is 100%.

Group of orthologs #169. Best score 148 bits
Score difference with first non-orthologous sequence - C.immitis:148 L.interrogans:148

J3KJQ8              	100.00%		Q8F144              	100.00%
Bootstrap support for J3KJQ8 as seed ortholog is 100%.
Bootstrap support for Q8F144 as seed ortholog is 100%.

Group of orthologs #170. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:144 L.interrogans:144

J3K8K1              	100.00%		Q8F6P7              	100.00%
Bootstrap support for J3K8K1 as seed ortholog is 100%.
Bootstrap support for Q8F6P7 as seed ortholog is 100%.

Group of orthologs #171. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:88 L.interrogans:144

J3KHQ6              	100.00%		P59164              	100.00%
Bootstrap support for J3KHQ6 as seed ortholog is 100%.
Bootstrap support for P59164 as seed ortholog is 100%.

Group of orthologs #172. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:144 L.interrogans:144

J3KIE8              	100.00%		Q8F7Q3              	100.00%
Bootstrap support for J3KIE8 as seed ortholog is 100%.
Bootstrap support for Q8F7Q3 as seed ortholog is 100%.

Group of orthologs #173. Best score 142 bits
Score difference with first non-orthologous sequence - C.immitis:49 L.interrogans:142

J3KE22              	100.00%		Q8EYR3              	100.00%
Bootstrap support for J3KE22 as seed ortholog is 84%.
Bootstrap support for Q8EYR3 as seed ortholog is 100%.

Group of orthologs #174. Best score 142 bits
Score difference with first non-orthologous sequence - C.immitis:11 L.interrogans:142

J3KBA8              	100.00%		Q8F445              	100.00%
Bootstrap support for J3KBA8 as seed ortholog is 57%.
Alternative seed ortholog is J3K272 (11 bits away from this cluster)
Bootstrap support for Q8F445 as seed ortholog is 100%.

Group of orthologs #175. Best score 141 bits
Score difference with first non-orthologous sequence - C.immitis:141 L.interrogans:141

I9XL94              	100.00%		Q8EY41              	100.00%
Bootstrap support for I9XL94 as seed ortholog is 100%.
Bootstrap support for Q8EY41 as seed ortholog is 100%.

Group of orthologs #176. Best score 141 bits
Score difference with first non-orthologous sequence - C.immitis:141 L.interrogans:141

J3KIF2              	100.00%		Q8F438              	100.00%
Bootstrap support for J3KIF2 as seed ortholog is 100%.
Bootstrap support for Q8F438 as seed ortholog is 100%.

Group of orthologs #177. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:140 L.interrogans:140

J3K7U3              	100.00%		Q8F8Y6              	100.00%
Bootstrap support for J3K7U3 as seed ortholog is 100%.
Bootstrap support for Q8F8Y6 as seed ortholog is 100%.

Group of orthologs #178. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:140 L.interrogans:140

J3KI87              	100.00%		P94871              	100.00%
Bootstrap support for J3KI87 as seed ortholog is 100%.
Bootstrap support for P94871 as seed ortholog is 100%.

Group of orthologs #179. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:65 L.interrogans:139

J3KA32              	100.00%		Q8F5P3              	100.00%
Bootstrap support for J3KA32 as seed ortholog is 98%.
Bootstrap support for Q8F5P3 as seed ortholog is 100%.

Group of orthologs #180. Best score 138 bits
Score difference with first non-orthologous sequence - C.immitis:138 L.interrogans:138

J3K3P7              	100.00%		P59119              	100.00%
Bootstrap support for J3K3P7 as seed ortholog is 100%.
Bootstrap support for P59119 as seed ortholog is 100%.

Group of orthologs #181. Best score 138 bits
Score difference with first non-orthologous sequence - C.immitis:138 L.interrogans:138

J3KM19              	100.00%		Q8F8Z0              	100.00%
Bootstrap support for J3KM19 as seed ortholog is 100%.
Bootstrap support for Q8F8Z0 as seed ortholog is 100%.

Group of orthologs #182. Best score 137 bits
Score difference with first non-orthologous sequence - C.immitis:137 L.interrogans:137

J3KI90              	100.00%		Q8F4E4              	100.00%
J3K712              	29.95%		
J3K7W6              	28.38%		
J3K8Q4              	7.09%		
Bootstrap support for J3KI90 as seed ortholog is 100%.
Bootstrap support for Q8F4E4 as seed ortholog is 100%.

Group of orthologs #183. Best score 137 bits
Score difference with first non-orthologous sequence - C.immitis:137 L.interrogans:137

J3K4B8              	100.00%		Q8F433              	100.00%
Bootstrap support for J3K4B8 as seed ortholog is 100%.
Bootstrap support for Q8F433 as seed ortholog is 100%.

Group of orthologs #184. Best score 137 bits
Score difference with first non-orthologous sequence - C.immitis:27 L.interrogans:137

J3K977              	100.00%		Q8F2P2              	100.00%
Bootstrap support for J3K977 as seed ortholog is 79%.
Bootstrap support for Q8F2P2 as seed ortholog is 100%.

Group of orthologs #185. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:45 L.interrogans:136

J3KDL2              	100.00%		Q8F341              	100.00%
Bootstrap support for J3KDL2 as seed ortholog is 82%.
Bootstrap support for Q8F341 as seed ortholog is 100%.

Group of orthologs #186. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:136 L.interrogans:69

P0CL21              	100.00%		Q8F2D1              	100.00%
Bootstrap support for P0CL21 as seed ortholog is 100%.
Bootstrap support for Q8F2D1 as seed ortholog is 96%.

Group of orthologs #187. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:136 L.interrogans:136

J3KJ07              	100.00%		Q8F7W8              	100.00%
Bootstrap support for J3KJ07 as seed ortholog is 100%.
Bootstrap support for Q8F7W8 as seed ortholog is 100%.

Group of orthologs #188. Best score 135 bits
Score difference with first non-orthologous sequence - C.immitis:135 L.interrogans:135

J3K552              	100.00%		Q8EYC6              	100.00%
Bootstrap support for J3K552 as seed ortholog is 100%.
Bootstrap support for Q8EYC6 as seed ortholog is 100%.

Group of orthologs #189. Best score 135 bits
Score difference with first non-orthologous sequence - C.immitis:135 L.interrogans:135

J3KDF1              	100.00%		Q8F1P9              	100.00%
Bootstrap support for J3KDF1 as seed ortholog is 100%.
Bootstrap support for Q8F1P9 as seed ortholog is 100%.

Group of orthologs #190. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:134 L.interrogans:134

J3K0I6              	100.00%		Q8F7D9              	100.00%
Bootstrap support for J3K0I6 as seed ortholog is 100%.
Bootstrap support for Q8F7D9 as seed ortholog is 100%.

Group of orthologs #191. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:12 L.interrogans:13

J3K7A7              	100.00%		Q8F4G4              	100.00%
Bootstrap support for J3K7A7 as seed ortholog is 77%.
Bootstrap support for Q8F4G4 as seed ortholog is 83%.

Group of orthologs #192. Best score 132 bits
Score difference with first non-orthologous sequence - C.immitis:37 L.interrogans:132

Q1E4I8              	100.00%		Q9XD15              	100.00%
Bootstrap support for Q1E4I8 as seed ortholog is 88%.
Bootstrap support for Q9XD15 as seed ortholog is 100%.

Group of orthologs #193. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 L.interrogans:131

J3K4J8              	100.00%		Q8F3V0              	100.00%
                    	       		Q8F3U9              	20.38%
                    	       		Q8F3U8              	17.24%
Bootstrap support for J3K4J8 as seed ortholog is 100%.
Bootstrap support for Q8F3V0 as seed ortholog is 100%.

Group of orthologs #194. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:59 L.interrogans:131

J3KFT2              	100.00%		Q7ZAM9              	100.00%
J3K584              	8.82%		
Bootstrap support for J3KFT2 as seed ortholog is 94%.
Bootstrap support for Q7ZAM9 as seed ortholog is 100%.

Group of orthologs #195. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:30 L.interrogans:131

J3KKR4              	100.00%		Q8EY44              	100.00%
Bootstrap support for J3KKR4 as seed ortholog is 77%.
Bootstrap support for Q8EY44 as seed ortholog is 100%.

Group of orthologs #196. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 L.interrogans:131

Q1E8M9              	100.00%		Q8F2Y6              	100.00%
Bootstrap support for Q1E8M9 as seed ortholog is 100%.
Bootstrap support for Q8F2Y6 as seed ortholog is 100%.

Group of orthologs #197. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 L.interrogans:129

J3KBQ2              	100.00%		Q8F805              	100.00%
Bootstrap support for J3KBQ2 as seed ortholog is 100%.
Bootstrap support for Q8F805 as seed ortholog is 100%.

Group of orthologs #198. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 L.interrogans:128

I9NSL3              	100.00%		Q8EZ25              	100.00%
J3KIW2              	11.63%		
J3K435              	10.13%		
J3K7P4              	7.29%		
J3K2S7              	6.86%		
J3KFB2              	6.70%		
Bootstrap support for I9NSL3 as seed ortholog is 100%.
Bootstrap support for Q8EZ25 as seed ortholog is 100%.

Group of orthologs #199. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 L.interrogans:128

J3KBZ4              	100.00%		Q8EZG9              	100.00%
Bootstrap support for J3KBZ4 as seed ortholog is 100%.
Bootstrap support for Q8EZG9 as seed ortholog is 100%.

Group of orthologs #200. Best score 125 bits
Score difference with first non-orthologous sequence - C.immitis:125 L.interrogans:125

J3K4Q7              	100.00%		Q8EXN2              	100.00%
Bootstrap support for J3K4Q7 as seed ortholog is 100%.
Bootstrap support for Q8EXN2 as seed ortholog is 100%.

Group of orthologs #201. Best score 125 bits
Score difference with first non-orthologous sequence - C.immitis:67 L.interrogans:125

J3K025              	100.00%		Q8F6J3              	100.00%
Bootstrap support for J3K025 as seed ortholog is 93%.
Bootstrap support for Q8F6J3 as seed ortholog is 100%.

Group of orthologs #202. Best score 125 bits
Score difference with first non-orthologous sequence - C.immitis:40 L.interrogans:125

J3K3Z0              	100.00%		Q8F7B6              	100.00%
Bootstrap support for J3K3Z0 as seed ortholog is 89%.
Bootstrap support for Q8F7B6 as seed ortholog is 100%.

Group of orthologs #203. Best score 125 bits
Score difference with first non-orthologous sequence - C.immitis:125 L.interrogans:80

J3K8H9              	100.00%		Q8F4A9              	100.00%
Bootstrap support for J3K8H9 as seed ortholog is 100%.
Bootstrap support for Q8F4A9 as seed ortholog is 99%.

Group of orthologs #204. Best score 124 bits
Score difference with first non-orthologous sequence - C.immitis:124 L.interrogans:51

J3KJS4              	100.00%		Q8F5Q6              	100.00%
J0HE59              	7.72%		
Bootstrap support for J3KJS4 as seed ortholog is 100%.
Bootstrap support for Q8F5Q6 as seed ortholog is 94%.

Group of orthologs #205. Best score 124 bits
Score difference with first non-orthologous sequence - C.immitis:124 L.interrogans:124

J3K7C4              	100.00%		Q8F4L0              	100.00%
Bootstrap support for J3K7C4 as seed ortholog is 100%.
Bootstrap support for Q8F4L0 as seed ortholog is 100%.

Group of orthologs #206. Best score 124 bits
Score difference with first non-orthologous sequence - C.immitis:124 L.interrogans:124

J3K8J5              	100.00%		Q8F865              	100.00%
Bootstrap support for J3K8J5 as seed ortholog is 100%.
Bootstrap support for Q8F865 as seed ortholog is 100%.

Group of orthologs #207. Best score 122 bits
Score difference with first non-orthologous sequence - C.immitis:122 L.interrogans:122

J3KHL6              	100.00%		Q8F394              	100.00%
Bootstrap support for J3KHL6 as seed ortholog is 100%.
Bootstrap support for Q8F394 as seed ortholog is 100%.

Group of orthologs #208. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 L.interrogans:28

J3KDD7              	100.00%		Q8EYS4              	100.00%
J3KAI9              	51.90%		
Bootstrap support for J3KDD7 as seed ortholog is 100%.
Bootstrap support for Q8EYS4 as seed ortholog is 76%.

Group of orthologs #209. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:19 L.interrogans:71

J3KJL4              	100.00%		Q8F4B1              	100.00%
Bootstrap support for J3KJL4 as seed ortholog is 70%.
Alternative seed ortholog is J3KAF3 (19 bits away from this cluster)
Bootstrap support for Q8F4B1 as seed ortholog is 95%.

Group of orthologs #210. Best score 120 bits
Score difference with first non-orthologous sequence - C.immitis:120 L.interrogans:120

J3K1R8              	100.00%		Q8EZN4              	100.00%
Bootstrap support for J3K1R8 as seed ortholog is 100%.
Bootstrap support for Q8EZN4 as seed ortholog is 100%.

Group of orthologs #211. Best score 120 bits
Score difference with first non-orthologous sequence - C.immitis:120 L.interrogans:10

J3KLL3              	100.00%		Q8F120              	100.00%
Bootstrap support for J3KLL3 as seed ortholog is 100%.
Bootstrap support for Q8F120 as seed ortholog is 64%.
Alternative seed ortholog is Q8F7U5 (10 bits away from this cluster)

Group of orthologs #212. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 L.interrogans:119

J3K049              	100.00%		Q8F0N7              	100.00%
Bootstrap support for J3K049 as seed ortholog is 100%.
Bootstrap support for Q8F0N7 as seed ortholog is 100%.

Group of orthologs #213. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 L.interrogans:119

J3KKQ7              	100.00%		Q8F9M2              	100.00%
Bootstrap support for J3KKQ7 as seed ortholog is 100%.
Bootstrap support for Q8F9M2 as seed ortholog is 100%.

Group of orthologs #214. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:4 L.interrogans:118

J3K2E0              	100.00%		Q8F0F4              	100.00%
J3K6Y2              	10.87%		
Bootstrap support for J3K2E0 as seed ortholog is 56%.
Alternative seed ortholog is J3KIX0 (4 bits away from this cluster)
Bootstrap support for Q8F0F4 as seed ortholog is 100%.

Group of orthologs #215. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 L.interrogans:118

J3K9V7              	100.00%		Q8F132              	100.00%
P0CL20              	11.99%		
Bootstrap support for J3K9V7 as seed ortholog is 100%.
Bootstrap support for Q8F132 as seed ortholog is 100%.

Group of orthologs #216. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 L.interrogans:118

J3KBV7              	100.00%		Q8F703              	100.00%
Bootstrap support for J3KBV7 as seed ortholog is 100%.
Bootstrap support for Q8F703 as seed ortholog is 100%.

Group of orthologs #217. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 L.interrogans:116

J3K2S2              	100.00%		Q8F2H8              	100.00%
Bootstrap support for J3K2S2 as seed ortholog is 100%.
Bootstrap support for Q8F2H8 as seed ortholog is 100%.

Group of orthologs #218. Best score 115 bits
Score difference with first non-orthologous sequence - C.immitis:115 L.interrogans:115

J3KMD5              	100.00%		Q8EZ03              	100.00%
Bootstrap support for J3KMD5 as seed ortholog is 100%.
Bootstrap support for Q8EZ03 as seed ortholog is 100%.

Group of orthologs #219. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:114 L.interrogans:42

J3K864              	100.00%		Q8F489              	100.00%
J3K5A8              	42.19%		
Bootstrap support for J3K864 as seed ortholog is 100%.
Bootstrap support for Q8F489 as seed ortholog is 83%.

Group of orthologs #220. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:114 L.interrogans:114

J3K2G6              	100.00%		Q8EY46              	100.00%
Bootstrap support for J3K2G6 as seed ortholog is 100%.
Bootstrap support for Q8EY46 as seed ortholog is 100%.

Group of orthologs #221. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:114 L.interrogans:15

J3K2E4              	100.00%		Q8F9U1              	100.00%
Bootstrap support for J3K2E4 as seed ortholog is 100%.
Bootstrap support for Q8F9U1 as seed ortholog is 63%.
Alternative seed ortholog is Q8F9A3 (15 bits away from this cluster)

Group of orthologs #222. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:114 L.interrogans:114

J3KHH3              	100.00%		Q8F9Y3              	100.00%
Bootstrap support for J3KHH3 as seed ortholog is 100%.
Bootstrap support for Q8F9Y3 as seed ortholog is 100%.

Group of orthologs #223. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:52 L.interrogans:113

J3KH54              	100.00%		Q8F1C0              	100.00%
Bootstrap support for J3KH54 as seed ortholog is 94%.
Bootstrap support for Q8F1C0 as seed ortholog is 100%.

Group of orthologs #224. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:113 L.interrogans:113

J3KF78              	100.00%		Q8F5T9              	100.00%
Bootstrap support for J3KF78 as seed ortholog is 100%.
Bootstrap support for Q8F5T9 as seed ortholog is 100%.

Group of orthologs #225. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 L.interrogans:112

J3K6C8              	100.00%		Q8F4H4              	100.00%
J3KLI3              	32.46%		
J3K7X6              	31.99%		
J3K3W1              	31.99%		
J3KBW7              	28.28%		
J3KC80              	26.58%		
Bootstrap support for J3K6C8 as seed ortholog is 100%.
Bootstrap support for Q8F4H4 as seed ortholog is 100%.

Group of orthologs #226. Best score 111 bits
Score difference with first non-orthologous sequence - C.immitis:111 L.interrogans:111

J3K8D9              	100.00%		Q8F801              	100.00%
J3K058              	44.48%		
Bootstrap support for J3K8D9 as seed ortholog is 100%.
Bootstrap support for Q8F801 as seed ortholog is 100%.

Group of orthologs #227. Best score 111 bits
Score difference with first non-orthologous sequence - C.immitis:111 L.interrogans:111

J0HIA1              	100.00%		Q8F4A7              	100.00%
Bootstrap support for J0HIA1 as seed ortholog is 100%.
Bootstrap support for Q8F4A7 as seed ortholog is 100%.

Group of orthologs #228. Best score 111 bits
Score difference with first non-orthologous sequence - C.immitis:64 L.interrogans:111

J3KCY4              	100.00%		Q8F140              	100.00%
Bootstrap support for J3KCY4 as seed ortholog is 97%.
Bootstrap support for Q8F140 as seed ortholog is 100%.

Group of orthologs #229. Best score 111 bits
Score difference with first non-orthologous sequence - C.immitis:111 L.interrogans:111

J3KE68              	100.00%		Q8F8F7              	100.00%
Bootstrap support for J3KE68 as seed ortholog is 100%.
Bootstrap support for Q8F8F7 as seed ortholog is 100%.

Group of orthologs #230. Best score 110 bits
Score difference with first non-orthologous sequence - C.immitis:38 L.interrogans:110

J3K046              	100.00%		Q8F1Q1              	100.00%
J3KM46              	27.21%		
Bootstrap support for J3K046 as seed ortholog is 87%.
Bootstrap support for Q8F1Q1 as seed ortholog is 100%.

Group of orthologs #231. Best score 110 bits
Score difference with first non-orthologous sequence - C.immitis:110 L.interrogans:110

J3K056              	100.00%		Q8F0B5              	100.00%
Bootstrap support for J3K056 as seed ortholog is 100%.
Bootstrap support for Q8F0B5 as seed ortholog is 100%.

Group of orthologs #232. Best score 110 bits
Score difference with first non-orthologous sequence - C.immitis:70 L.interrogans:110

J3KJ92              	100.00%		Q8EXJ3              	100.00%
Bootstrap support for J3KJ92 as seed ortholog is 99%.
Bootstrap support for Q8EXJ3 as seed ortholog is 100%.

Group of orthologs #233. Best score 108 bits
Score difference with first non-orthologous sequence - C.immitis:54 L.interrogans:108

J3K1M7              	100.00%		Q8F411              	100.00%
Bootstrap support for J3K1M7 as seed ortholog is 89%.
Bootstrap support for Q8F411 as seed ortholog is 100%.

Group of orthologs #234. Best score 108 bits
Score difference with first non-orthologous sequence - C.immitis:40 L.interrogans:108

J3KI00              	100.00%		Q9XD26              	100.00%
Bootstrap support for J3KI00 as seed ortholog is 95%.
Bootstrap support for Q9XD26 as seed ortholog is 100%.

Group of orthologs #235. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 L.interrogans:107

J3K6W4              	100.00%		Q8EY22              	100.00%
Bootstrap support for J3K6W4 as seed ortholog is 100%.
Bootstrap support for Q8EY22 as seed ortholog is 100%.

Group of orthologs #236. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 L.interrogans:107

J3KDI5              	100.00%		Q8F4D2              	100.00%
Bootstrap support for J3KDI5 as seed ortholog is 100%.
Bootstrap support for Q8F4D2 as seed ortholog is 100%.

Group of orthologs #237. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 L.interrogans:107

J3KG95              	100.00%		Q8F3Y0              	100.00%
Bootstrap support for J3KG95 as seed ortholog is 100%.
Bootstrap support for Q8F3Y0 as seed ortholog is 100%.

Group of orthologs #238. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 L.interrogans:39

J3KF04              	100.00%		Q8F116              	100.00%
                    	       		Q8F115              	54.84%
                    	       		Q8F119              	52.82%
                    	       		Q8F3F8              	52.02%
                    	       		Q8F3F9              	50.00%
                    	       		Q8F118              	49.80%
                    	       		Q8F117              	46.37%
                    	       		Q8F213              	40.93%
                    	       		Q8F212              	40.12%
                    	       		Q8F7S1              	35.69%
                    	       		Q8F3F4              	32.06%
                    	       		Q8F2B3              	28.23%
                    	       		Q8F3G3              	20.36%
Bootstrap support for J3KF04 as seed ortholog is 100%.
Bootstrap support for Q8F116 as seed ortholog is 96%.

Group of orthologs #239. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:39 L.interrogans:106

J3K5G9              	100.00%		Q8F361              	100.00%
J3KIW5              	10.38%		
Bootstrap support for J3K5G9 as seed ortholog is 95%.
Bootstrap support for Q8F361 as seed ortholog is 100%.

Group of orthologs #240. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:34 L.interrogans:106

J3K6B6              	100.00%		Q8F3A9              	100.00%
Bootstrap support for J3K6B6 as seed ortholog is 73%.
Alternative seed ortholog is J3K522 (34 bits away from this cluster)
Bootstrap support for Q8F3A9 as seed ortholog is 100%.

Group of orthologs #241. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:52 L.interrogans:20

J3K4A3              	100.00%		Q8CXR3              	100.00%
Bootstrap support for J3K4A3 as seed ortholog is 92%.
Bootstrap support for Q8CXR3 as seed ortholog is 74%.
Alternative seed ortholog is Q8CXT3 (20 bits away from this cluster)

Group of orthologs #242. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 L.interrogans:104

J3K932              	100.00%		Q8F0R9              	100.00%
Bootstrap support for J3K932 as seed ortholog is 100%.
Bootstrap support for Q8F0R9 as seed ortholog is 100%.

Group of orthologs #243. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 L.interrogans:37

J3K688              	100.00%		Q8FA04              	100.00%
Bootstrap support for J3K688 as seed ortholog is 100%.
Bootstrap support for Q8FA04 as seed ortholog is 87%.

Group of orthologs #244. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 L.interrogans:104

J3KD65              	100.00%		Q8F342              	100.00%
Bootstrap support for J3KD65 as seed ortholog is 100%.
Bootstrap support for Q8F342 as seed ortholog is 100%.

Group of orthologs #245. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 L.interrogans:102

J3K152              	100.00%		Q8EZB6              	100.00%
Bootstrap support for J3K152 as seed ortholog is 100%.
Bootstrap support for Q8EZB6 as seed ortholog is 100%.

Group of orthologs #246. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 L.interrogans:102

J3K219              	100.00%		Q8F936              	100.00%
Bootstrap support for J3K219 as seed ortholog is 100%.
Bootstrap support for Q8F936 as seed ortholog is 100%.

Group of orthologs #247. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 L.interrogans:102

J3KES4              	100.00%		Q8F729              	100.00%
Bootstrap support for J3KES4 as seed ortholog is 100%.
Bootstrap support for Q8F729 as seed ortholog is 100%.

Group of orthologs #248. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 L.interrogans:102

J3KCZ0              	100.00%		Q8F9N0              	100.00%
Bootstrap support for J3KCZ0 as seed ortholog is 100%.
Bootstrap support for Q8F9N0 as seed ortholog is 100%.

Group of orthologs #249. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 L.interrogans:102

J3KHP1              	100.00%		Q8F6Y3              	100.00%
Bootstrap support for J3KHP1 as seed ortholog is 100%.
Bootstrap support for Q8F6Y3 as seed ortholog is 100%.

Group of orthologs #250. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 L.interrogans:100

J3KI25              	100.00%		D5MNY2              	100.00%
Bootstrap support for J3KI25 as seed ortholog is 100%.
Bootstrap support for D5MNY2 as seed ortholog is 100%.

Group of orthologs #251. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 L.interrogans:100

J3KKY1              	100.00%		Q8F1P3              	100.00%
Bootstrap support for J3KKY1 as seed ortholog is 100%.
Bootstrap support for Q8F1P3 as seed ortholog is 100%.

Group of orthologs #252. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:99 L.interrogans:99

J0HH91              	100.00%		Q8F839              	100.00%
Bootstrap support for J0HH91 as seed ortholog is 100%.
Bootstrap support for Q8F839 as seed ortholog is 100%.

Group of orthologs #253. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:99 L.interrogans:99

J3K6H0              	100.00%		Q8EYS5              	100.00%
Bootstrap support for J3K6H0 as seed ortholog is 100%.
Bootstrap support for Q8EYS5 as seed ortholog is 100%.

Group of orthologs #254. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:99 L.interrogans:99

J3KJE1              	100.00%		Q8F3K8              	100.00%
Bootstrap support for J3KJE1 as seed ortholog is 100%.
Bootstrap support for Q8F3K8 as seed ortholog is 100%.

Group of orthologs #255. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:18 L.interrogans:99

J3KM66              	100.00%		Q8F8N1              	100.00%
Bootstrap support for J3KM66 as seed ortholog is 63%.
Alternative seed ortholog is J3K9W2 (18 bits away from this cluster)
Bootstrap support for Q8F8N1 as seed ortholog is 100%.

Group of orthologs #256. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 L.interrogans:98

J3KFT5              	100.00%		Q8F5J3              	100.00%
Bootstrap support for J3KFT5 as seed ortholog is 100%.
Bootstrap support for Q8F5J3 as seed ortholog is 100%.

Group of orthologs #257. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 L.interrogans:98

J3KJ64              	100.00%		Q9XD21              	100.00%
Bootstrap support for J3KJ64 as seed ortholog is 100%.
Bootstrap support for Q9XD21 as seed ortholog is 100%.

Group of orthologs #258. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:4 L.interrogans:96

J3KIW7              	100.00%		Q8F7H4              	100.00%
J3K733              	10.08%		
J3KA10              	9.30%		
Bootstrap support for J3KIW7 as seed ortholog is 56%.
Alternative seed ortholog is J3K9A7 (4 bits away from this cluster)
Bootstrap support for Q8F7H4 as seed ortholog is 100%.

Group of orthologs #259. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:5 L.interrogans:96

I9XJB7              	100.00%		Q8EY23              	100.00%
                    	       		Q8F4R4              	16.84%
Bootstrap support for I9XJB7 as seed ortholog is 55%.
Alternative seed ortholog is J3K9A7 (5 bits away from this cluster)
Bootstrap support for Q8EY23 as seed ortholog is 100%.

Group of orthologs #260. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 L.interrogans:96

J3KAA6              	100.00%		Q8F9R6              	100.00%
Bootstrap support for J3KAA6 as seed ortholog is 100%.
Bootstrap support for Q8F9R6 as seed ortholog is 100%.

Group of orthologs #261. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:6 L.interrogans:96

Q1E406              	100.00%		Q8F661              	100.00%
Bootstrap support for Q1E406 as seed ortholog is 55%.
Alternative seed ortholog is J3KEI7 (6 bits away from this cluster)
Bootstrap support for Q8F661 as seed ortholog is 100%.

Group of orthologs #262. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:94 L.interrogans:94

J3KDI0              	100.00%		Q9XD36              	100.00%
Bootstrap support for J3KDI0 as seed ortholog is 100%.
Bootstrap support for Q9XD36 as seed ortholog is 100%.

Group of orthologs #263. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 L.interrogans:93

J3KFY0              	100.00%		Q8F631              	100.00%
Bootstrap support for J3KFY0 as seed ortholog is 100%.
Bootstrap support for Q8F631 as seed ortholog is 100%.

Group of orthologs #264. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 L.interrogans:91

J3KJ24              	100.00%		Q8F8H7              	100.00%
J3KEY6              	49.90%		
Bootstrap support for J3KJ24 as seed ortholog is 100%.
Bootstrap support for Q8F8H7 as seed ortholog is 100%.

Group of orthologs #265. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 L.interrogans:91

J3K2H4              	100.00%		Q8F0R8              	100.00%
Bootstrap support for J3K2H4 as seed ortholog is 100%.
Bootstrap support for Q8F0R8 as seed ortholog is 100%.

Group of orthologs #266. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 L.interrogans:91

J3KE58              	100.00%		Q8F646              	100.00%
Bootstrap support for J3KE58 as seed ortholog is 100%.
Bootstrap support for Q8F646 as seed ortholog is 100%.

Group of orthologs #267. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 L.interrogans:91

J3KE05              	100.00%		Q8F8W1              	100.00%
Bootstrap support for J3KE05 as seed ortholog is 100%.
Bootstrap support for Q8F8W1 as seed ortholog is 100%.

Group of orthologs #268. Best score 90 bits
Score difference with first non-orthologous sequence - C.immitis:44 L.interrogans:90

J3KDP6              	100.00%		Q8F0T2              	100.00%
Bootstrap support for J3KDP6 as seed ortholog is 97%.
Bootstrap support for Q8F0T2 as seed ortholog is 100%.

Group of orthologs #269. Best score 90 bits
Score difference with first non-orthologous sequence - C.immitis:90 L.interrogans:90

J3KEV9              	100.00%		Q8F5P6              	100.00%
Bootstrap support for J3KEV9 as seed ortholog is 100%.
Bootstrap support for Q8F5P6 as seed ortholog is 100%.

Group of orthologs #270. Best score 90 bits
Score difference with first non-orthologous sequence - C.immitis:90 L.interrogans:90

J3KKC0              	100.00%		Q8F5G0              	100.00%
Bootstrap support for J3KKC0 as seed ortholog is 100%.
Bootstrap support for Q8F5G0 as seed ortholog is 100%.

Group of orthologs #271. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 L.interrogans:89

J0HH20              	100.00%		Q8F2Y2              	100.00%
J3KKQ2              	14.38%		
J3K4N3              	6.65%		
Bootstrap support for J0HH20 as seed ortholog is 100%.
Bootstrap support for Q8F2Y2 as seed ortholog is 100%.

Group of orthologs #272. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 L.interrogans:88

J3KGJ2              	100.00%		Q8EZ91              	100.00%
Bootstrap support for J3KGJ2 as seed ortholog is 100%.
Bootstrap support for Q8EZ91 as seed ortholog is 100%.

Group of orthologs #273. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 L.interrogans:88

J3KAM0              	100.00%		Q8F8N2              	100.00%
Bootstrap support for J3KAM0 as seed ortholog is 100%.
Bootstrap support for Q8F8N2 as seed ortholog is 100%.

Group of orthologs #274. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:28 L.interrogans:88

J3KHF0              	100.00%		Q8F091              	100.00%
Bootstrap support for J3KHF0 as seed ortholog is 80%.
Bootstrap support for Q8F091 as seed ortholog is 100%.

Group of orthologs #275. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:36 L.interrogans:87

J3K7T4              	100.00%		Q8F999              	100.00%
J3K462              	24.64%		
J3KAN0              	23.06%		
J3KBY9              	10.11%		
J3K4V2              	6.64%		
Bootstrap support for J3K7T4 as seed ortholog is 81%.
Bootstrap support for Q8F999 as seed ortholog is 100%.

Group of orthologs #276. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:12 L.interrogans:87

J3K664              	100.00%		Q8EY16              	100.00%
                    	       		Q8EZ09              	5.00%
Bootstrap support for J3K664 as seed ortholog is 62%.
Alternative seed ortholog is J3K6K7 (12 bits away from this cluster)
Bootstrap support for Q8EY16 as seed ortholog is 100%.

Group of orthologs #277. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 L.interrogans:24

J3K1R3              	100.00%		Q8F2G2              	100.00%
Bootstrap support for J3K1R3 as seed ortholog is 100%.
Bootstrap support for Q8F2G2 as seed ortholog is 80%.

Group of orthologs #278. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 L.interrogans:87

J3K4Q3              	100.00%		Q8F5W1              	100.00%
Bootstrap support for J3K4Q3 as seed ortholog is 100%.
Bootstrap support for Q8F5W1 as seed ortholog is 100%.

Group of orthologs #279. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:16 L.interrogans:86

J3KFA6              	100.00%		Q8EXT7              	100.00%
J3K026              	12.90%		
J3K8V0              	9.68%		
I9NT56              	9.48%		
J3KJP8              	7.06%		
J3KEE7              	6.25%		
J3K9R1              	5.85%		
J3KGK1              	5.85%		
J3K698              	5.85%		
Bootstrap support for J3KFA6 as seed ortholog is 70%.
Alternative seed ortholog is J3K9A7 (16 bits away from this cluster)
Bootstrap support for Q8EXT7 as seed ortholog is 100%.

Group of orthologs #280. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 L.interrogans:86

J3K0G9              	100.00%		Q8F153              	100.00%
Bootstrap support for J3K0G9 as seed ortholog is 100%.
Bootstrap support for Q8F153 as seed ortholog is 100%.

Group of orthologs #281. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 L.interrogans:86

J3K4X0              	100.00%		Q8F9Y0              	100.00%
Bootstrap support for J3K4X0 as seed ortholog is 100%.
Bootstrap support for Q8F9Y0 as seed ortholog is 100%.

Group of orthologs #282. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 L.interrogans:86

J3K9U5              	100.00%		Q8F8Q3              	100.00%
Bootstrap support for J3K9U5 as seed ortholog is 100%.
Bootstrap support for Q8F8Q3 as seed ortholog is 100%.

Group of orthologs #283. Best score 85 bits
Score difference with first non-orthologous sequence - C.immitis:8 L.interrogans:85

J3KKD0              	100.00%		Q8EXV5              	100.00%
J3K0I1              	16.94%		
J3KKD2              	15.59%		
Bootstrap support for J3KKD0 as seed ortholog is 62%.
Alternative seed ortholog is J3K4E7 (8 bits away from this cluster)
Bootstrap support for Q8EXV5 as seed ortholog is 100%.

Group of orthologs #284. Best score 85 bits
Score difference with first non-orthologous sequence - C.immitis:3 L.interrogans:85

J3K1N7              	100.00%		Q8F693              	100.00%
Bootstrap support for J3K1N7 as seed ortholog is 54%.
Alternative seed ortholog is J3K921 (3 bits away from this cluster)
Bootstrap support for Q8F693 as seed ortholog is 100%.

Group of orthologs #285. Best score 85 bits
Score difference with first non-orthologous sequence - C.immitis:85 L.interrogans:85

J3KBG8              	100.00%		Q8F6W9              	100.00%
Bootstrap support for J3KBG8 as seed ortholog is 100%.
Bootstrap support for Q8F6W9 as seed ortholog is 100%.

Group of orthologs #286. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:35 L.interrogans:84

J3K2M5              	100.00%		Q8CXU1              	100.00%
Bootstrap support for J3K2M5 as seed ortholog is 80%.
Bootstrap support for Q8CXU1 as seed ortholog is 100%.

Group of orthologs #287. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:42 L.interrogans:84

J3K1V3              	100.00%		Q8F9R0              	100.00%
Bootstrap support for J3K1V3 as seed ortholog is 94%.
Bootstrap support for Q8F9R0 as seed ortholog is 100%.

Group of orthologs #288. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 L.interrogans:84

J3K3G7              	100.00%		Q9XD08              	100.00%
Bootstrap support for J3K3G7 as seed ortholog is 100%.
Bootstrap support for Q9XD08 as seed ortholog is 100%.

Group of orthologs #289. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 L.interrogans:83

J3K6J6              	100.00%		Q8EYJ7              	100.00%
Bootstrap support for J3K6J6 as seed ortholog is 100%.
Bootstrap support for Q8EYJ7 as seed ortholog is 100%.

Group of orthologs #290. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 L.interrogans:83

J3K5I5              	100.00%		Q9XD19              	100.00%
Bootstrap support for J3K5I5 as seed ortholog is 100%.
Bootstrap support for Q9XD19 as seed ortholog is 100%.

Group of orthologs #291. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 L.interrogans:83

J3KH29              	100.00%		Q8EYJ3              	100.00%
Bootstrap support for J3KH29 as seed ortholog is 100%.
Bootstrap support for Q8EYJ3 as seed ortholog is 100%.

Group of orthologs #292. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:31 L.interrogans:83

J3KDT0              	100.00%		Q8F954              	100.00%
Bootstrap support for J3KDT0 as seed ortholog is 85%.
Bootstrap support for Q8F954 as seed ortholog is 100%.

Group of orthologs #293. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 L.interrogans:83

Q1E7Y1              	100.00%		Q8F2X0              	100.00%
Bootstrap support for Q1E7Y1 as seed ortholog is 100%.
Bootstrap support for Q8F2X0 as seed ortholog is 100%.

Group of orthologs #294. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:40 L.interrogans:82

J3KCI7              	100.00%		Q8F8G2              	100.00%
Bootstrap support for J3KCI7 as seed ortholog is 89%.
Bootstrap support for Q8F8G2 as seed ortholog is 100%.

Group of orthologs #295. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:2 L.interrogans:82

J3KJJ3              	100.00%		Q8F8F5              	100.00%
Bootstrap support for J3KJJ3 as seed ortholog is 59%.
Alternative seed ortholog is J3KFP4 (2 bits away from this cluster)
Bootstrap support for Q8F8F5 as seed ortholog is 100%.

Group of orthologs #296. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 L.interrogans:81

J3KCK3              	100.00%		Q8F3I9              	100.00%
J3KJG6              	100.00%		
J3KI27              	50.77%		
J3K8W3              	32.61%		
J3K069              	27.26%		
Bootstrap support for J3KCK3 as seed ortholog is 100%.
Bootstrap support for J3KJG6 as seed ortholog is 100%.
Bootstrap support for Q8F3I9 as seed ortholog is 100%.

Group of orthologs #297. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 L.interrogans:81

P0CL19              	100.00%		Q8F928              	100.00%
Bootstrap support for P0CL19 as seed ortholog is 100%.
Bootstrap support for Q8F928 as seed ortholog is 100%.

Group of orthologs #298. Best score 80 bits
Score difference with first non-orthologous sequence - C.immitis:80 L.interrogans:80

J3KFP2              	100.00%		Q9XD29              	100.00%
Bootstrap support for J3KFP2 as seed ortholog is 100%.
Bootstrap support for Q9XD29 as seed ortholog is 100%.

Group of orthologs #299. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 L.interrogans:79

J3K2P5              	100.00%		Q9XD35              	100.00%
Bootstrap support for J3K2P5 as seed ortholog is 100%.
Bootstrap support for Q9XD35 as seed ortholog is 100%.

Group of orthologs #300. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 L.interrogans:79

J3KLS5              	100.00%		Q8F0S1              	100.00%
Bootstrap support for J3KLS5 as seed ortholog is 100%.
Bootstrap support for Q8F0S1 as seed ortholog is 100%.

Group of orthologs #301. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:14 L.interrogans:77

J3KG26              	100.00%		Q8F4I7              	100.00%
J3KLQ7              	21.50%		
Bootstrap support for J3KG26 as seed ortholog is 62%.
Alternative seed ortholog is J3KMB4 (14 bits away from this cluster)
Bootstrap support for Q8F4I7 as seed ortholog is 100%.

Group of orthologs #302. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 L.interrogans:77

J3K331              	100.00%		Q8F1N2              	100.00%
Bootstrap support for J3K331 as seed ortholog is 100%.
Bootstrap support for Q8F1N2 as seed ortholog is 100%.

Group of orthologs #303. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 L.interrogans:77

J3K1Q4              	100.00%		Q8F9F8              	100.00%
Bootstrap support for J3K1Q4 as seed ortholog is 100%.
Bootstrap support for Q8F9F8 as seed ortholog is 100%.

Group of orthologs #304. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 L.interrogans:16

J3KC02              	100.00%		Q8EZQ7              	100.00%
Bootstrap support for J3KC02 as seed ortholog is 100%.
Bootstrap support for Q8EZQ7 as seed ortholog is 65%.
Alternative seed ortholog is Q8F4R1 (16 bits away from this cluster)

Group of orthologs #305. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 L.interrogans:77

J3KEU7              	100.00%		Q8F2J4              	100.00%
Bootstrap support for J3KEU7 as seed ortholog is 100%.
Bootstrap support for Q8F2J4 as seed ortholog is 100%.

Group of orthologs #306. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:24 L.interrogans:76

J3K0D6              	100.00%		Q9XD12              	100.00%
Bootstrap support for J3K0D6 as seed ortholog is 88%.
Bootstrap support for Q9XD12 as seed ortholog is 100%.

Group of orthologs #307. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 L.interrogans:76

J3KIZ6              	100.00%		Q8F1Y2              	100.00%
Bootstrap support for J3KIZ6 as seed ortholog is 100%.
Bootstrap support for Q8F1Y2 as seed ortholog is 100%.

Group of orthologs #308. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 L.interrogans:76

J3KMC9              	100.00%		Q8F4T4              	100.00%
Bootstrap support for J3KMC9 as seed ortholog is 100%.
Bootstrap support for Q8F4T4 as seed ortholog is 100%.

Group of orthologs #309. Best score 75 bits
Score difference with first non-orthologous sequence - C.immitis:75 L.interrogans:75

J3KHG1              	100.00%		Q8EXC1              	100.00%
Bootstrap support for J3KHG1 as seed ortholog is 100%.
Bootstrap support for Q8EXC1 as seed ortholog is 100%.

Group of orthologs #310. Best score 75 bits
Score difference with first non-orthologous sequence - C.immitis:75 L.interrogans:75

J3KJ17              	100.00%		Q8F1S6              	100.00%
Bootstrap support for J3KJ17 as seed ortholog is 100%.
Bootstrap support for Q8F1S6 as seed ortholog is 100%.

Group of orthologs #311. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 L.interrogans:74

J3KL39              	100.00%		Q8EZY8              	100.00%
J3K620              	23.61%		Q8F9C1              	24.11%
                    	       		Q8F6L8              	21.04%
                    	       		Q8F6Z1              	15.60%
                    	       		Q8F4I5              	13.00%
                    	       		Q8EYI4              	11.82%
                    	       		Q8F7H6              	8.04%
                    	       		Q8F3J7              	6.86%
Bootstrap support for J3KL39 as seed ortholog is 100%.
Bootstrap support for Q8EZY8 as seed ortholog is 100%.

Group of orthologs #312. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 L.interrogans:74

J3K3S3              	100.00%		Q8F774              	100.00%
J3KEW3              	19.45%		
Bootstrap support for J3K3S3 as seed ortholog is 100%.
Bootstrap support for Q8F774 as seed ortholog is 100%.

Group of orthologs #313. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 L.interrogans:74

J3KIL8              	100.00%		Q8F8L7              	100.00%
J3KH89              	7.04%		
Bootstrap support for J3KIL8 as seed ortholog is 100%.
Bootstrap support for Q8F8L7 as seed ortholog is 100%.

Group of orthologs #314. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 L.interrogans:72

J3K1G0              	100.00%		Q8CXQ9              	100.00%
Bootstrap support for J3K1G0 as seed ortholog is 100%.
Bootstrap support for Q8CXQ9 as seed ortholog is 100%.

Group of orthologs #315. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 L.interrogans:72

J3KFH5              	100.00%		P61445              	100.00%
Bootstrap support for J3KFH5 as seed ortholog is 100%.
Bootstrap support for P61445 as seed ortholog is 100%.

Group of orthologs #316. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 L.interrogans:72

J3KMA1              	100.00%		Q8EXC0              	100.00%
Bootstrap support for J3KMA1 as seed ortholog is 100%.
Bootstrap support for Q8EXC0 as seed ortholog is 100%.

Group of orthologs #317. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:8 L.interrogans:9

J3K6V1              	100.00%		Q8EZ05              	100.00%
J3KLH4              	5.15%		
Bootstrap support for J3K6V1 as seed ortholog is 60%.
Alternative seed ortholog is J3KH53 (8 bits away from this cluster)
Bootstrap support for Q8EZ05 as seed ortholog is 54%.
Alternative seed ortholog is Q8F6H4 (9 bits away from this cluster)

Group of orthologs #318. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 L.interrogans:71

J3K1K2              	100.00%		Q8F7A1              	100.00%
J3K0E2              	22.00%		
Bootstrap support for J3K1K2 as seed ortholog is 100%.
Bootstrap support for Q8F7A1 as seed ortholog is 100%.

Group of orthologs #319. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 L.interrogans:71

I9NN85              	100.00%		Q8F6P1              	100.00%
Bootstrap support for I9NN85 as seed ortholog is 100%.
Bootstrap support for Q8F6P1 as seed ortholog is 100%.

Group of orthologs #320. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 L.interrogans:71

J3K8R4              	100.00%		Q8F5L8              	100.00%
Bootstrap support for J3K8R4 as seed ortholog is 100%.
Bootstrap support for Q8F5L8 as seed ortholog is 100%.

Group of orthologs #321. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 L.interrogans:71

J3KM54              	100.00%		Q8F5F7              	100.00%
Bootstrap support for J3KM54 as seed ortholog is 100%.
Bootstrap support for Q8F5F7 as seed ortholog is 100%.

Group of orthologs #322. Best score 70 bits
Score difference with first non-orthologous sequence - C.immitis:70 L.interrogans:70

J3K4Y0              	100.00%		Q8EZG6              	100.00%
Bootstrap support for J3K4Y0 as seed ortholog is 100%.
Bootstrap support for Q8EZG6 as seed ortholog is 100%.

Group of orthologs #323. Best score 69 bits
Score difference with first non-orthologous sequence - C.immitis:14 L.interrogans:69

J3K0J7              	100.00%		Q8EYL3              	100.00%
Bootstrap support for J3K0J7 as seed ortholog is 67%.
Alternative seed ortholog is J3K6U3 (14 bits away from this cluster)
Bootstrap support for Q8EYL3 as seed ortholog is 100%.

Group of orthologs #324. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 L.interrogans:68

J3K4F7              	100.00%		Q8EZ21              	100.00%
Bootstrap support for J3K4F7 as seed ortholog is 100%.
Bootstrap support for Q8EZ21 as seed ortholog is 100%.

Group of orthologs #325. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 L.interrogans:68

J3K8N8              	100.00%		Q8EZJ0              	100.00%
Bootstrap support for J3K8N8 as seed ortholog is 100%.
Bootstrap support for Q8EZJ0 as seed ortholog is 100%.

Group of orthologs #326. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 L.interrogans:68

J3KDI4              	100.00%		Q8EZB9              	100.00%
Bootstrap support for J3KDI4 as seed ortholog is 100%.
Bootstrap support for Q8EZB9 as seed ortholog is 100%.

Group of orthologs #327. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 L.interrogans:68

J3K918              	100.00%		Q8F7Y6              	100.00%
Bootstrap support for J3K918 as seed ortholog is 100%.
Bootstrap support for Q8F7Y6 as seed ortholog is 100%.

Group of orthologs #328. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 L.interrogans:68

J3KBS8              	100.00%		Q8F501              	100.00%
Bootstrap support for J3KBS8 as seed ortholog is 100%.
Bootstrap support for Q8F501 as seed ortholog is 100%.

Group of orthologs #329. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 L.interrogans:67

J3KBK0              	100.00%		Q8EY68              	100.00%
Bootstrap support for J3KBK0 as seed ortholog is 100%.
Bootstrap support for Q8EY68 as seed ortholog is 100%.

Group of orthologs #330. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 L.interrogans:67

J3K9D0              	100.00%		Q8F3W3              	100.00%
Bootstrap support for J3K9D0 as seed ortholog is 100%.
Bootstrap support for Q8F3W3 as seed ortholog is 100%.

Group of orthologs #331. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 L.interrogans:67

J3KC53              	100.00%		Q8F059              	100.00%
Bootstrap support for J3KC53 as seed ortholog is 100%.
Bootstrap support for Q8F059 as seed ortholog is 100%.

Group of orthologs #332. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 L.interrogans:67

J3K7R6              	100.00%		Q8F6B6              	100.00%
Bootstrap support for J3K7R6 as seed ortholog is 100%.
Bootstrap support for Q8F6B6 as seed ortholog is 100%.

Group of orthologs #333. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 L.interrogans:67

J3KDL7              	100.00%		Q8F523              	100.00%
Bootstrap support for J3KDL7 as seed ortholog is 100%.
Bootstrap support for Q8F523 as seed ortholog is 100%.

Group of orthologs #334. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 L.interrogans:67

J3KAW4              	100.00%		Q8FA20              	100.00%
Bootstrap support for J3KAW4 as seed ortholog is 100%.
Bootstrap support for Q8FA20 as seed ortholog is 100%.

Group of orthologs #335. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 L.interrogans:15

I9NP76              	100.00%		Q8F9H1              	100.00%
J3K3D6              	12.59%		
Bootstrap support for I9NP76 as seed ortholog is 100%.
Bootstrap support for Q8F9H1 as seed ortholog is 70%.
Alternative seed ortholog is Q8F0N0 (15 bits away from this cluster)

Group of orthologs #336. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 L.interrogans:66

J3KDA6              	100.00%		Q8EY77              	100.00%
Bootstrap support for J3KDA6 as seed ortholog is 100%.
Bootstrap support for Q8EY77 as seed ortholog is 100%.

Group of orthologs #337. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 L.interrogans:66

J3KDP9              	100.00%		Q9XD11              	100.00%
Bootstrap support for J3KDP9 as seed ortholog is 100%.
Bootstrap support for Q9XD11 as seed ortholog is 100%.

Group of orthologs #338. Best score 65 bits
Score difference with first non-orthologous sequence - C.immitis:65 L.interrogans:65

J3KLP8              	100.00%		Q8F968              	100.00%
                    	       		Q8F6C6              	24.67%
Bootstrap support for J3KLP8 as seed ortholog is 100%.
Bootstrap support for Q8F968 as seed ortholog is 100%.

Group of orthologs #339. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 L.interrogans:64

J3KES2              	100.00%		Q8F3W7              	100.00%
Bootstrap support for J3KES2 as seed ortholog is 100%.
Bootstrap support for Q8F3W7 as seed ortholog is 100%.

Group of orthologs #340. Best score 63 bits
Score difference with first non-orthologous sequence - C.immitis:9 L.interrogans:10

J3K4I0              	100.00%		Q8F4W8              	100.00%
                    	       		Q8EZU3              	16.10%
Bootstrap support for J3K4I0 as seed ortholog is 74%.
Alternative seed ortholog is J3KE57 (9 bits away from this cluster)
Bootstrap support for Q8F4W8 as seed ortholog is 83%.

Group of orthologs #341. Best score 63 bits
Score difference with first non-orthologous sequence - C.immitis:63 L.interrogans:63

J3K6I2              	100.00%		Q8F632              	100.00%
Bootstrap support for J3K6I2 as seed ortholog is 100%.
Bootstrap support for Q8F632 as seed ortholog is 100%.

Group of orthologs #342. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 L.interrogans:62

J3KFM7              	100.00%		Q8F2J1              	100.00%
Bootstrap support for J3KFM7 as seed ortholog is 100%.
Bootstrap support for Q8F2J1 as seed ortholog is 100%.

Group of orthologs #343. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 L.interrogans:61

J3K2P8              	100.00%		Q8F4C5              	100.00%
Bootstrap support for J3K2P8 as seed ortholog is 100%.
Bootstrap support for Q8F4C5 as seed ortholog is 100%.

Group of orthologs #344. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 L.interrogans:61

J3KHZ3              	100.00%		P59118              	100.00%
Bootstrap support for J3KHZ3 as seed ortholog is 100%.
Bootstrap support for P59118 as seed ortholog is 100%.

Group of orthologs #345. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 L.interrogans:61

J3KM55              	100.00%		Q8CXT5              	100.00%
Bootstrap support for J3KM55 as seed ortholog is 100%.
Bootstrap support for Q8CXT5 as seed ortholog is 100%.

Group of orthologs #346. Best score 60 bits
Score difference with first non-orthologous sequence - C.immitis:60 L.interrogans:60

I9NP67              	100.00%		Q93TV7              	100.00%
J3KCA4              	39.47%		
Bootstrap support for I9NP67 as seed ortholog is 100%.
Bootstrap support for Q93TV7 as seed ortholog is 100%.

Group of orthologs #347. Best score 60 bits
Score difference with first non-orthologous sequence - C.immitis:60 L.interrogans:60

I9NT75              	100.00%		Q8F0S5              	100.00%
Bootstrap support for I9NT75 as seed ortholog is 100%.
Bootstrap support for Q8F0S5 as seed ortholog is 100%.

Group of orthologs #348. Best score 60 bits
Score difference with first non-orthologous sequence - C.immitis:60 L.interrogans:60

I9NPF5              	100.00%		Q8F8F4              	100.00%
Bootstrap support for I9NPF5 as seed ortholog is 100%.
Bootstrap support for Q8F8F4 as seed ortholog is 100%.

Group of orthologs #349. Best score 60 bits
Score difference with first non-orthologous sequence - C.immitis:60 L.interrogans:60

J3K4F8              	100.00%		Q8FA29              	100.00%
Bootstrap support for J3K4F8 as seed ortholog is 100%.
Bootstrap support for Q8FA29 as seed ortholog is 100%.

Group of orthologs #350. Best score 60 bits
Score difference with first non-orthologous sequence - C.immitis:60 L.interrogans:60

J3KIB9              	100.00%		Q8F8Z3              	100.00%
Bootstrap support for J3KIB9 as seed ortholog is 100%.
Bootstrap support for Q8F8Z3 as seed ortholog is 100%.

Group of orthologs #351. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 L.interrogans:59

J3K0L9              	100.00%		P61437              	100.00%
Bootstrap support for J3K0L9 as seed ortholog is 100%.
Bootstrap support for P61437 as seed ortholog is 100%.

Group of orthologs #352. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 L.interrogans:59

J3K0F7              	100.00%		Q9XD24              	100.00%
Bootstrap support for J3K0F7 as seed ortholog is 100%.
Bootstrap support for Q9XD24 as seed ortholog is 100%.

Group of orthologs #353. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 L.interrogans:59

J3KES5              	100.00%		Q8F0X9              	100.00%
Bootstrap support for J3KES5 as seed ortholog is 100%.
Bootstrap support for Q8F0X9 as seed ortholog is 100%.

Group of orthologs #354. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 L.interrogans:59

J3KIN4              	100.00%		Q8F2L0              	100.00%
Bootstrap support for J3KIN4 as seed ortholog is 100%.
Bootstrap support for Q8F2L0 as seed ortholog is 100%.

Group of orthologs #355. Best score 58 bits
Score difference with first non-orthologous sequence - C.immitis:58 L.interrogans:58

J3KKH1              	100.00%		Q8F061              	100.00%
Bootstrap support for J3KKH1 as seed ortholog is 100%.
Bootstrap support for Q8F061 as seed ortholog is 100%.

Group of orthologs #356. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 L.interrogans:57

J3KDG0              	100.00%		Q8EY58              	100.00%
I9XLP4              	8.98%		
Bootstrap support for J3KDG0 as seed ortholog is 100%.
Bootstrap support for Q8EY58 as seed ortholog is 100%.

Group of orthologs #357. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 L.interrogans:57

J3KDL5              	100.00%		Q8F3Z0              	100.00%
Bootstrap support for J3KDL5 as seed ortholog is 100%.
Bootstrap support for Q8F3Z0 as seed ortholog is 100%.

Group of orthologs #358. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 L.interrogans:57

J3KGY9              	100.00%		Q8F392              	100.00%
Bootstrap support for J3KGY9 as seed ortholog is 100%.
Bootstrap support for Q8F392 as seed ortholog is 100%.

Group of orthologs #359. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 L.interrogans:57

J3KLT1              	100.00%		Q8F145              	100.00%
Bootstrap support for J3KLT1 as seed ortholog is 100%.
Bootstrap support for Q8F145 as seed ortholog is 100%.

Group of orthologs #360. Best score 56 bits
Score difference with first non-orthologous sequence - C.immitis:56 L.interrogans:56

J3KIE5              	100.00%		Q8F0K1              	100.00%
J3K753              	39.31%		
Bootstrap support for J3KIE5 as seed ortholog is 100%.
Bootstrap support for Q8F0K1 as seed ortholog is 100%.

Group of orthologs #361. Best score 55 bits
Score difference with first non-orthologous sequence - C.immitis:55 L.interrogans:55

J3K778              	100.00%		Q8EXF8              	100.00%
J3KAX6              	46.61%		
J3KH99              	35.06%		
J3KID4              	29.58%		
J3K335              	29.48%		
J3K0X3              	29.28%		
J3KDH3              	27.76%		
J3K8U0              	27.25%		
J3K9B7              	26.04%		
J3KAX3              	24.42%		
J3K1R5              	17.02%		
J3KKU8              	14.69%		
J3KGV1              	11.96%		
J3KAE9              	10.94%		
J0HEF5              	9.52%		
J3K0Y7              	8.21%		
J3KJK5              	8.11%		
J3K3V3              	7.90%		
J3K1P9              	6.79%		
J3K9U1              	6.38%		
J3KM73              	6.08%		
Bootstrap support for J3K778 as seed ortholog is 100%.
Bootstrap support for Q8EXF8 as seed ortholog is 100%.

Group of orthologs #362. Best score 55 bits
Score difference with first non-orthologous sequence - C.immitis:55 L.interrogans:55

J3K958              	100.00%		Q8EYG8              	100.00%
Bootstrap support for J3K958 as seed ortholog is 100%.
Bootstrap support for Q8EYG8 as seed ortholog is 100%.

Group of orthologs #363. Best score 55 bits
Score difference with first non-orthologous sequence - C.immitis:55 L.interrogans:55

J3K2D7              	100.00%		Q9XD32              	100.00%
Bootstrap support for J3K2D7 as seed ortholog is 100%.
Bootstrap support for Q9XD32 as seed ortholog is 100%.

Group of orthologs #364. Best score 55 bits
Score difference with first non-orthologous sequence - C.immitis:55 L.interrogans:55

J3KIM5              	100.00%		Q8EY37              	100.00%
Bootstrap support for J3KIM5 as seed ortholog is 100%.
Bootstrap support for Q8EY37 as seed ortholog is 100%.

Group of orthologs #365. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:5 L.interrogans:54

J3K2H7              	100.00%		Q8EZ20              	100.00%
J3K8N5              	53.74%		
J3KJX1              	35.10%		
J0HDU4              	28.93%		
J3K7U9              	23.51%		
J3K1C7              	23.29%		
J3KEE9              	23.19%		
J3K7M1              	22.43%		
J3KA51              	22.32%		
J3KJD4              	21.78%		
J3K0U0              	17.12%		
J3KLF7              	17.12%		
I9NLP7              	16.47%		
J3KJ44              	15.49%		
J3K5L5              	15.28%		
J0HGN5              	15.17%		
J3K9V5              	15.06%		
J3K028              	14.52%		
J3KI62              	11.48%		
J3K920              	10.94%		
J3K4A6              	9.64%		
J3KCM7              	9.21%		
J3KI16              	8.88%		
J3K2B2              	7.15%		
J3K1Y7              	5.85%		
Bootstrap support for J3K2H7 as seed ortholog is 48%.
Alternative seed ortholog is J3K4E6 (5 bits away from this cluster)
Bootstrap support for Q8EZ20 as seed ortholog is 100%.

Group of orthologs #366. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 L.interrogans:54

J3KAW8              	100.00%		Q8F0U0              	100.00%
J3K254              	15.90%		
Bootstrap support for J3KAW8 as seed ortholog is 100%.
Bootstrap support for Q8F0U0 as seed ortholog is 100%.

Group of orthologs #367. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 L.interrogans:54

J3K9H0              	100.00%		Q8F4K6              	100.00%
                    	       		Q8F025              	12.72%
Bootstrap support for J3K9H0 as seed ortholog is 100%.
Bootstrap support for Q8F4K6 as seed ortholog is 100%.

Group of orthologs #368. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 L.interrogans:54

J3K5P3              	100.00%		Q8F417              	100.00%
Bootstrap support for J3K5P3 as seed ortholog is 100%.
Bootstrap support for Q8F417 as seed ortholog is 100%.

Group of orthologs #369. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 L.interrogans:54

J3K6V9              	100.00%		Q8F8L8              	100.00%
Bootstrap support for J3K6V9 as seed ortholog is 100%.
Bootstrap support for Q8F8L8 as seed ortholog is 100%.

Group of orthologs #370. Best score 53 bits
Score difference with first non-orthologous sequence - C.immitis:53 L.interrogans:53

J3KM33              	100.00%		Q8F4A2              	100.00%
J3K6J5              	49.32%		
Bootstrap support for J3KM33 as seed ortholog is 100%.
Bootstrap support for Q8F4A2 as seed ortholog is 100%.

Group of orthologs #371. Best score 53 bits
Score difference with first non-orthologous sequence - C.immitis:53 L.interrogans:53

J3K8J2              	100.00%		Q8F031              	100.00%
Bootstrap support for J3K8J2 as seed ortholog is 100%.
Bootstrap support for Q8F031 as seed ortholog is 100%.

Group of orthologs #372. Best score 53 bits
Score difference with first non-orthologous sequence - C.immitis:53 L.interrogans:53

J3KAJ3              	100.00%		Q8F072              	100.00%
Bootstrap support for J3KAJ3 as seed ortholog is 100%.
Bootstrap support for Q8F072 as seed ortholog is 100%.

Group of orthologs #373. Best score 53 bits
Score difference with first non-orthologous sequence - C.immitis:53 L.interrogans:53

J3KD44              	100.00%		Q8F3K6              	100.00%
Bootstrap support for J3KD44 as seed ortholog is 100%.
Bootstrap support for Q8F3K6 as seed ortholog is 100%.

Group of orthologs #374. Best score 53 bits
Score difference with first non-orthologous sequence - C.immitis:53 L.interrogans:53

J3KES8              	100.00%		Q8F2J6              	100.00%
Bootstrap support for J3KES8 as seed ortholog is 100%.
Bootstrap support for Q8F2J6 as seed ortholog is 100%.

Group of orthologs #375. Best score 51 bits
Score difference with first non-orthologous sequence - C.immitis:51 L.interrogans:51

J3K9P4              	100.00%		Q8F3L1              	100.00%
Bootstrap support for J3K9P4 as seed ortholog is 100%.
Bootstrap support for Q8F3L1 as seed ortholog is 100%.

Group of orthologs #376. Best score 51 bits
Score difference with first non-orthologous sequence - C.immitis:51 L.interrogans:51

J3KLC5              	100.00%		Q8F143              	100.00%
Bootstrap support for J3KLC5 as seed ortholog is 100%.
Bootstrap support for Q8F143 as seed ortholog is 100%.

Group of orthologs #377. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 L.interrogans:50

Q1DWN4              	100.00%		Q8EXP5              	100.00%
Q1DXN1              	21.15%		
Bootstrap support for Q1DWN4 as seed ortholog is 100%.
Bootstrap support for Q8EXP5 as seed ortholog is 100%.

Group of orthologs #378. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 L.interrogans:50

J3KK32              	100.00%		Q8F4J7              	100.00%
J3KJY0              	10.43%		
Bootstrap support for J3KK32 as seed ortholog is 100%.
Bootstrap support for Q8F4J7 as seed ortholog is 100%.

Group of orthologs #379. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 L.interrogans:50

J3K0R9              	100.00%		Q8F0B7              	100.00%
Bootstrap support for J3K0R9 as seed ortholog is 100%.
Bootstrap support for Q8F0B7 as seed ortholog is 100%.

Group of orthologs #380. Best score 49 bits
Score difference with first non-orthologous sequence - C.immitis:49 L.interrogans:49

I9NN69              	100.00%		P52277              	100.00%
J3K1W4              	37.94%		
Bootstrap support for I9NN69 as seed ortholog is 100%.
Bootstrap support for P52277 as seed ortholog is 100%.

Group of orthologs #381. Best score 49 bits
Score difference with first non-orthologous sequence - C.immitis:49 L.interrogans:49

I9XKT0              	100.00%		Q8F4C9              	100.00%
Bootstrap support for I9XKT0 as seed ortholog is 100%.
Bootstrap support for Q8F4C9 as seed ortholog is 100%.

Group of orthologs #382. Best score 49 bits
Score difference with first non-orthologous sequence - C.immitis:49 L.interrogans:49

J3K6P4              	100.00%		Q9XD37              	100.00%
Bootstrap support for J3K6P4 as seed ortholog is 100%.
Bootstrap support for Q9XD37 as seed ortholog is 100%.

Group of orthologs #383. Best score 49 bits
Score difference with first non-orthologous sequence - C.immitis:49 L.interrogans:49

J3KIH4              	100.00%		Q8EZ81              	100.00%
Bootstrap support for J3KIH4 as seed ortholog is 100%.
Bootstrap support for Q8EZ81 as seed ortholog is 100%.

Group of orthologs #384. Best score 49 bits
Score difference with first non-orthologous sequence - C.immitis:49 L.interrogans:4

J3KLK2              	100.00%		Q8EZD0              	100.00%
Bootstrap support for J3KLK2 as seed ortholog is 100%.
Bootstrap support for Q8EZD0 as seed ortholog is 54%.
Alternative seed ortholog is Q8F5R1 (4 bits away from this cluster)

Group of orthologs #385. Best score 48 bits
Score difference with first non-orthologous sequence - C.immitis:48 L.interrogans:48

J0HFU7              	100.00%		Q8F230              	100.00%
Bootstrap support for J0HFU7 as seed ortholog is 100%.
Bootstrap support for Q8F230 as seed ortholog is 100%.

Group of orthologs #386. Best score 48 bits
Score difference with first non-orthologous sequence - C.immitis:48 L.interrogans:48

J3K6S5              	100.00%		Q8F9T6              	100.00%
Bootstrap support for J3K6S5 as seed ortholog is 100%.
Bootstrap support for Q8F9T6 as seed ortholog is 100%.

Group of orthologs #387. Best score 48 bits
Score difference with first non-orthologous sequence - C.immitis:48 L.interrogans:48

J3KFD5              	100.00%		Q8F0D5              	100.00%
Bootstrap support for J3KFD5 as seed ortholog is 100%.
Bootstrap support for Q8F0D5 as seed ortholog is 100%.

Group of orthologs #388. Best score 48 bits
Score difference with first non-orthologous sequence - C.immitis:48 L.interrogans:48

J3KJC9              	100.00%		Q8EYU9              	100.00%
Bootstrap support for J3KJC9 as seed ortholog is 100%.
Bootstrap support for Q8EYU9 as seed ortholog is 100%.

Group of orthologs #389. Best score 45 bits
Score difference with first non-orthologous sequence - C.immitis:3 L.interrogans:45

J3K963              	100.00%		Q8F8Y3              	100.00%
                    	       		Q8F8Y1              	59.28%
                    	       		Q8F0U3              	7.71%
Bootstrap support for J3K963 as seed ortholog is 47%.
Alternative seed ortholog is J3K7X0 (3 bits away from this cluster)
Bootstrap support for Q8F8Y3 as seed ortholog is 100%.

Group of orthologs #390. Best score 45 bits
Score difference with first non-orthologous sequence - C.immitis:45 L.interrogans:45

J3KEF5              	100.00%		Q8EZ67              	100.00%
J3K1T2              	30.39%		
Bootstrap support for J3KEF5 as seed ortholog is 100%.
Bootstrap support for Q8EZ67 as seed ortholog is 100%.

Group of orthologs #391. Best score 45 bits
Score difference with first non-orthologous sequence - C.immitis:45 L.interrogans:45

J3K7K5              	100.00%		Q8F766              	100.00%
Bootstrap support for J3K7K5 as seed ortholog is 100%.
Bootstrap support for Q8F766 as seed ortholog is 100%.

Group of orthologs #392. Best score 43 bits
Score difference with first non-orthologous sequence - C.immitis:43 L.interrogans:43

J3KAU6              	100.00%		Q9XD22              	100.00%
Bootstrap support for J3KAU6 as seed ortholog is 100%.
Bootstrap support for Q9XD22 as seed ortholog is 100%.

Group of orthologs #393. Best score 43 bits
Score difference with first non-orthologous sequence - C.immitis:43 L.interrogans:43

J3KK04              	100.00%		Q8F0A9              	100.00%
Bootstrap support for J3KK04 as seed ortholog is 100%.
Bootstrap support for Q8F0A9 as seed ortholog is 100%.

Group of orthologs #394. Best score 42 bits
Score difference with first non-orthologous sequence - C.immitis:42 L.interrogans:42

J3K764              	100.00%		Q8F4Z2              	100.00%
Bootstrap support for J3K764 as seed ortholog is 100%.
Bootstrap support for Q8F4Z2 as seed ortholog is 100%.

Group of orthologs #395. Best score 41 bits
Score difference with first non-orthologous sequence - C.immitis:41 L.interrogans:41

J3K395              	100.00%		Q8F6U3              	100.00%
Bootstrap support for J3K395 as seed ortholog is 100%.
Bootstrap support for Q8F6U3 as seed ortholog is 100%.

Group of orthologs #396. Best score 41 bits
Score difference with first non-orthologous sequence - C.immitis:41 L.interrogans:41

J3K7J3              	100.00%		Q8F5N9              	100.00%
Bootstrap support for J3K7J3 as seed ortholog is 100%.
Bootstrap support for Q8F5N9 as seed ortholog is 100%.