###################################
881 groups of orthologs
898 in-paralogs from C.hominis
1214 in-paralogs from P.pallidum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 2739 bits
Score difference with first non-orthologous sequence - C.hominis:2739 P.pallidum:2739

Q5CIY6              	100.00%		D3BFM8              	100.00%
Bootstrap support for Q5CIY6 as seed ortholog is 100%.
Bootstrap support for D3BFM8 as seed ortholog is 100%.

Group of orthologs #2. Best score 1765 bits
Score difference with first non-orthologous sequence - C.hominis:1765 P.pallidum:1172

Q5CH45              	100.00%		D3BJK4              	100.00%
Bootstrap support for Q5CH45 as seed ortholog is 100%.
Bootstrap support for D3BJK4 as seed ortholog is 100%.

Group of orthologs #3. Best score 1227 bits
Score difference with first non-orthologous sequence - C.hominis:1227 P.pallidum:1227

Q5CM48              	100.00%		D3BI99              	100.00%
Bootstrap support for Q5CM48 as seed ortholog is 100%.
Bootstrap support for D3BI99 as seed ortholog is 100%.

Group of orthologs #4. Best score 1174 bits
Score difference with first non-orthologous sequence - C.hominis:1174 P.pallidum:611

Q5CK97              	100.00%		D3BKC8              	100.00%
Bootstrap support for Q5CK97 as seed ortholog is 100%.
Bootstrap support for D3BKC8 as seed ortholog is 100%.

Group of orthologs #5. Best score 1131 bits
Score difference with first non-orthologous sequence - C.hominis:1131 P.pallidum:675

Q5CKA3              	100.00%		D3BIX9              	100.00%
Bootstrap support for Q5CKA3 as seed ortholog is 100%.
Bootstrap support for D3BIX9 as seed ortholog is 100%.

Group of orthologs #6. Best score 1058 bits
Score difference with first non-orthologous sequence - C.hominis:886 P.pallidum:248

Q5CMC8              	100.00%		D3BU68              	100.00%
Bootstrap support for Q5CMC8 as seed ortholog is 100%.
Bootstrap support for D3BU68 as seed ortholog is 100%.

Group of orthologs #7. Best score 1034 bits
Score difference with first non-orthologous sequence - C.hominis:1034 P.pallidum:1034

Q5CLV4              	100.00%		D3BNB1              	100.00%
Bootstrap support for Q5CLV4 as seed ortholog is 100%.
Bootstrap support for D3BNB1 as seed ortholog is 100%.

Group of orthologs #8. Best score 958 bits
Score difference with first non-orthologous sequence - C.hominis:958 P.pallidum:958

Q5CJ92              	100.00%		D3AVZ6              	100.00%
                    	       		D3BVM0              	12.68%
Bootstrap support for Q5CJ92 as seed ortholog is 100%.
Bootstrap support for D3AVZ6 as seed ortholog is 100%.

Group of orthologs #9. Best score 950 bits
Score difference with first non-orthologous sequence - C.hominis:410 P.pallidum:195

Q5CIT8              	100.00%		D3B545              	100.00%
                    	       		D3AVQ2              	44.57%
Bootstrap support for Q5CIT8 as seed ortholog is 100%.
Bootstrap support for D3B545 as seed ortholog is 99%.

Group of orthologs #10. Best score 923 bits
Score difference with first non-orthologous sequence - C.hominis:923 P.pallidum:923

Q5CL79              	100.00%		D3BBT9              	100.00%
Bootstrap support for Q5CL79 as seed ortholog is 100%.
Bootstrap support for D3BBT9 as seed ortholog is 100%.

Group of orthologs #11. Best score 920 bits
Score difference with first non-orthologous sequence - C.hominis:383 P.pallidum:335

Q5CFW9              	100.00%		D3BEQ3              	100.00%
Bootstrap support for Q5CFW9 as seed ortholog is 100%.
Bootstrap support for D3BEQ3 as seed ortholog is 100%.

Group of orthologs #12. Best score 909 bits
Score difference with first non-orthologous sequence - C.hominis:909 P.pallidum:909

Q5CNC3              	100.00%		D3AYA7              	100.00%
Bootstrap support for Q5CNC3 as seed ortholog is 100%.
Bootstrap support for D3AYA7 as seed ortholog is 100%.

Group of orthologs #13. Best score 881 bits
Score difference with first non-orthologous sequence - C.hominis:881 P.pallidum:641

Q5CEK3              	100.00%		D3BUX1              	100.00%
Bootstrap support for Q5CEK3 as seed ortholog is 100%.
Bootstrap support for D3BUX1 as seed ortholog is 100%.

Group of orthologs #14. Best score 832 bits
Score difference with first non-orthologous sequence - C.hominis:553 P.pallidum:587

Q5CGR0              	100.00%		D3B2A8              	100.00%
Bootstrap support for Q5CGR0 as seed ortholog is 100%.
Bootstrap support for D3B2A8 as seed ortholog is 100%.

Group of orthologs #15. Best score 791 bits
Score difference with first non-orthologous sequence - C.hominis:791 P.pallidum:432

Q5CGE3              	100.00%		D3B7Q7              	100.00%
Bootstrap support for Q5CGE3 as seed ortholog is 100%.
Bootstrap support for D3B7Q7 as seed ortholog is 100%.

Group of orthologs #16. Best score 790 bits
Score difference with first non-orthologous sequence - C.hominis:790 P.pallidum:685

Q5CH42              	100.00%		D3AZB7              	100.00%
Bootstrap support for Q5CH42 as seed ortholog is 100%.
Bootstrap support for D3AZB7 as seed ortholog is 100%.

Group of orthologs #17. Best score 787 bits
Score difference with first non-orthologous sequence - C.hominis:787 P.pallidum:107

Q5CJN3              	100.00%		D3BPX3              	100.00%
Bootstrap support for Q5CJN3 as seed ortholog is 100%.
Bootstrap support for D3BPX3 as seed ortholog is 94%.

Group of orthologs #18. Best score 768 bits
Score difference with first non-orthologous sequence - C.hominis:768 P.pallidum:180

Q5CHC5              	100.00%		D3BB51              	100.00%
Bootstrap support for Q5CHC5 as seed ortholog is 100%.
Bootstrap support for D3BB51 as seed ortholog is 100%.

Group of orthologs #19. Best score 764 bits
Score difference with first non-orthologous sequence - C.hominis:764 P.pallidum:190

Q5CNG4              	100.00%		D3B6F6              	100.00%
Bootstrap support for Q5CNG4 as seed ortholog is 100%.
Bootstrap support for D3B6F6 as seed ortholog is 99%.

Group of orthologs #20. Best score 751 bits
Score difference with first non-orthologous sequence - C.hominis:440 P.pallidum:533

Q5CNS5              	100.00%		D3BDE5              	100.00%
Bootstrap support for Q5CNS5 as seed ortholog is 100%.
Bootstrap support for D3BDE5 as seed ortholog is 100%.

Group of orthologs #21. Best score 740 bits
Score difference with first non-orthologous sequence - C.hominis:628 P.pallidum:293

Q5CNH7              	100.00%		D3B127              	100.00%
Bootstrap support for Q5CNH7 as seed ortholog is 100%.
Bootstrap support for D3B127 as seed ortholog is 99%.

Group of orthologs #22. Best score 738 bits
Score difference with first non-orthologous sequence - C.hominis:514 P.pallidum:486

Q5CGG0              	100.00%		D3BQ59              	100.00%
Bootstrap support for Q5CGG0 as seed ortholog is 100%.
Bootstrap support for D3BQ59 as seed ortholog is 100%.

Group of orthologs #23. Best score 737 bits
Score difference with first non-orthologous sequence - C.hominis:737 P.pallidum:632

Q5CJ77              	100.00%		D3B5K2              	100.00%
Bootstrap support for Q5CJ77 as seed ortholog is 100%.
Bootstrap support for D3B5K2 as seed ortholog is 100%.

Group of orthologs #24. Best score 727 bits
Score difference with first non-orthologous sequence - C.hominis:359 P.pallidum:146

Q5CJD7              	100.00%		D3AY31              	100.00%
Bootstrap support for Q5CJD7 as seed ortholog is 100%.
Bootstrap support for D3AY31 as seed ortholog is 99%.

Group of orthologs #25. Best score 710 bits
Score difference with first non-orthologous sequence - C.hominis:710 P.pallidum:339

Q5CGD3              	100.00%		D3B6W7              	100.00%
Bootstrap support for Q5CGD3 as seed ortholog is 100%.
Bootstrap support for D3B6W7 as seed ortholog is 100%.

Group of orthologs #26. Best score 705 bits
Score difference with first non-orthologous sequence - C.hominis:409 P.pallidum:128

Q5CID0              	100.00%		D3BJ98              	100.00%
Bootstrap support for Q5CID0 as seed ortholog is 100%.
Bootstrap support for D3BJ98 as seed ortholog is 98%.

Group of orthologs #27. Best score 702 bits
Score difference with first non-orthologous sequence - C.hominis:702 P.pallidum:167

Q5CKG3              	100.00%		D3BEE3              	100.00%
Bootstrap support for Q5CKG3 as seed ortholog is 100%.
Bootstrap support for D3BEE3 as seed ortholog is 99%.

Group of orthologs #28. Best score 699 bits
Score difference with first non-orthologous sequence - C.hominis:461 P.pallidum:699

Q5CG54              	100.00%		D3AWD2              	100.00%
                    	       		D3BGV6              	56.19%
Bootstrap support for Q5CG54 as seed ortholog is 100%.
Bootstrap support for D3AWD2 as seed ortholog is 100%.

Group of orthologs #29. Best score 698 bits
Score difference with first non-orthologous sequence - C.hominis:698 P.pallidum:698

Q5CFF5              	100.00%		D3B1K5              	100.00%
Bootstrap support for Q5CFF5 as seed ortholog is 100%.
Bootstrap support for D3B1K5 as seed ortholog is 100%.

Group of orthologs #30. Best score 692 bits
Score difference with first non-orthologous sequence - C.hominis:692 P.pallidum:196

Q5CIR5              	100.00%		D3BMT5              	100.00%
Bootstrap support for Q5CIR5 as seed ortholog is 100%.
Bootstrap support for D3BMT5 as seed ortholog is 99%.

Group of orthologs #31. Best score 684 bits
Score difference with first non-orthologous sequence - C.hominis:684 P.pallidum:129

Q5CMZ7              	100.00%		D3BPX4              	100.00%
Bootstrap support for Q5CMZ7 as seed ortholog is 100%.
Bootstrap support for D3BPX4 as seed ortholog is 97%.

Group of orthologs #32. Best score 683 bits
Score difference with first non-orthologous sequence - C.hominis:233 P.pallidum:267

Q5CKP1              	100.00%		D3B3H8              	100.00%
                    	       		D3B337              	19.53%
                    	       		D3B1J7              	15.57%
                    	       		D3AWI5              	14.44%
                    	       		D3B6Y6              	13.32%
                    	       		D3BN60              	13.22%
                    	       		D3B6Z1              	12.76%
                    	       		D3BR90              	12.62%
                    	       		D3BN37              	11.96%
                    	       		D3BJX3              	11.95%
                    	       		D3BSJ8              	11.15%
                    	       		D3B7D7              	10.98%
                    	       		D3B7P7              	5.94%
Bootstrap support for Q5CKP1 as seed ortholog is 96%.
Bootstrap support for D3B3H8 as seed ortholog is 99%.

Group of orthologs #33. Best score 680 bits
Score difference with first non-orthologous sequence - C.hominis:1 P.pallidum:680

Q5CIW4              	100.00%		D3B1P3              	100.00%
Bootstrap support for Q5CIW4 as seed ortholog is 42%.
Alternative seed ortholog is Q5CJJ1 (1 bits away from this cluster)
Bootstrap support for D3B1P3 as seed ortholog is 100%.

Group of orthologs #34. Best score 660 bits
Score difference with first non-orthologous sequence - C.hominis:279 P.pallidum:138

Q5CH78              	100.00%		D3BD07              	100.00%
                    	       		D3B2M1              	97.98%
                    	       		D3BSX0              	87.88%
                    	       		D3BM82              	85.86%
                    	       		D3B1V2              	40.40%
Bootstrap support for Q5CH78 as seed ortholog is 100%.
Bootstrap support for D3BD07 as seed ortholog is 100%.

Group of orthologs #35. Best score 648 bits
Score difference with first non-orthologous sequence - C.hominis:648 P.pallidum:648

Q5CJW8              	100.00%		D3B5A9              	100.00%
Bootstrap support for Q5CJW8 as seed ortholog is 100%.
Bootstrap support for D3B5A9 as seed ortholog is 100%.

Group of orthologs #36. Best score 643 bits
Score difference with first non-orthologous sequence - C.hominis:643 P.pallidum:643

Q5CHA0              	100.00%		D3BIF3              	100.00%
Bootstrap support for Q5CHA0 as seed ortholog is 100%.
Bootstrap support for D3BIF3 as seed ortholog is 100%.

Group of orthologs #37. Best score 642 bits
Score difference with first non-orthologous sequence - C.hominis:642 P.pallidum:642

Q5CKU0              	100.00%		D3BM68              	100.00%
Bootstrap support for Q5CKU0 as seed ortholog is 100%.
Bootstrap support for D3BM68 as seed ortholog is 100%.

Group of orthologs #38. Best score 641 bits
Score difference with first non-orthologous sequence - C.hominis:641 P.pallidum:335

Q5CGV9              	100.00%		D3BIZ6              	100.00%
Bootstrap support for Q5CGV9 as seed ortholog is 100%.
Bootstrap support for D3BIZ6 as seed ortholog is 100%.

Group of orthologs #39. Best score 636 bits
Score difference with first non-orthologous sequence - C.hominis:636 P.pallidum:413

Q5CEF6              	100.00%		D3BPJ6              	100.00%
Bootstrap support for Q5CEF6 as seed ortholog is 100%.
Bootstrap support for D3BPJ6 as seed ortholog is 100%.

Group of orthologs #40. Best score 626 bits
Score difference with first non-orthologous sequence - C.hominis:532 P.pallidum:306

Q5CFP1              	100.00%		D3B6W8              	100.00%
Bootstrap support for Q5CFP1 as seed ortholog is 100%.
Bootstrap support for D3B6W8 as seed ortholog is 100%.

Group of orthologs #41. Best score 625 bits
Score difference with first non-orthologous sequence - C.hominis:625 P.pallidum:625

Q5CKT8              	100.00%		D3BH29              	100.00%
Bootstrap support for Q5CKT8 as seed ortholog is 100%.
Bootstrap support for D3BH29 as seed ortholog is 100%.

Group of orthologs #42. Best score 622 bits
Score difference with first non-orthologous sequence - C.hominis:337 P.pallidum:622

Q5CL81              	100.00%		D3BQW2              	100.00%
Bootstrap support for Q5CL81 as seed ortholog is 100%.
Bootstrap support for D3BQW2 as seed ortholog is 100%.

Group of orthologs #43. Best score 613 bits
Score difference with first non-orthologous sequence - C.hominis:613 P.pallidum:217

Q5CJ18              	100.00%		D3B255              	100.00%
Bootstrap support for Q5CJ18 as seed ortholog is 100%.
Bootstrap support for D3B255 as seed ortholog is 100%.

Group of orthologs #44. Best score 610 bits
Score difference with first non-orthologous sequence - C.hominis:610 P.pallidum:378

Q5CN42              	100.00%		D3BFC6              	100.00%
Bootstrap support for Q5CN42 as seed ortholog is 100%.
Bootstrap support for D3BFC6 as seed ortholog is 100%.

Group of orthologs #45. Best score 605 bits
Score difference with first non-orthologous sequence - C.hominis:605 P.pallidum:605

Q5CG95              	100.00%		D3AYV1              	100.00%
Bootstrap support for Q5CG95 as seed ortholog is 100%.
Bootstrap support for D3AYV1 as seed ortholog is 100%.

Group of orthologs #46. Best score 604 bits
Score difference with first non-orthologous sequence - C.hominis:279 P.pallidum:55

Q5CG30              	100.00%		D3B826              	100.00%
Q5CJE5              	10.76%		D3BK48              	25.14%
Bootstrap support for Q5CG30 as seed ortholog is 99%.
Bootstrap support for D3B826 as seed ortholog is 83%.

Group of orthologs #47. Best score 600 bits
Score difference with first non-orthologous sequence - C.hominis:319 P.pallidum:289

Q5CNK7              	100.00%		D3BMR9              	100.00%
Bootstrap support for Q5CNK7 as seed ortholog is 100%.
Bootstrap support for D3BMR9 as seed ortholog is 100%.

Group of orthologs #48. Best score 599 bits
Score difference with first non-orthologous sequence - C.hominis:599 P.pallidum:530

Q5CJV0              	100.00%		D3BT14              	100.00%
Bootstrap support for Q5CJV0 as seed ortholog is 100%.
Bootstrap support for D3BT14 as seed ortholog is 100%.

Group of orthologs #49. Best score 598 bits
Score difference with first non-orthologous sequence - C.hominis:598 P.pallidum:598

Q5CNU7              	100.00%		D3BI12              	100.00%
Bootstrap support for Q5CNU7 as seed ortholog is 100%.
Bootstrap support for D3BI12 as seed ortholog is 100%.

Group of orthologs #50. Best score 597 bits
Score difference with first non-orthologous sequence - C.hominis:597 P.pallidum:368

Q5CLL3              	100.00%		D3B5E4              	100.00%
Bootstrap support for Q5CLL3 as seed ortholog is 100%.
Bootstrap support for D3B5E4 as seed ortholog is 100%.

Group of orthologs #51. Best score 594 bits
Score difference with first non-orthologous sequence - C.hominis:594 P.pallidum:594

Q5CJZ3              	100.00%		D3B684              	100.00%
Bootstrap support for Q5CJZ3 as seed ortholog is 100%.
Bootstrap support for D3B684 as seed ortholog is 100%.

Group of orthologs #52. Best score 593 bits
Score difference with first non-orthologous sequence - C.hominis:14 P.pallidum:279

Q5CH19              	100.00%		D3B594              	100.00%
Bootstrap support for Q5CH19 as seed ortholog is 67%.
Alternative seed ortholog is Q5CM90 (14 bits away from this cluster)
Bootstrap support for D3B594 as seed ortholog is 99%.

Group of orthologs #53. Best score 591 bits
Score difference with first non-orthologous sequence - C.hominis:591 P.pallidum:408

Q5CEP2              	100.00%		D3B0K9              	100.00%
Bootstrap support for Q5CEP2 as seed ortholog is 100%.
Bootstrap support for D3B0K9 as seed ortholog is 100%.

Group of orthologs #54. Best score 587 bits
Score difference with first non-orthologous sequence - C.hominis:354 P.pallidum:260

Q5CHC9              	100.00%		D3B6E1              	100.00%
Bootstrap support for Q5CHC9 as seed ortholog is 100%.
Bootstrap support for D3B6E1 as seed ortholog is 100%.

Group of orthologs #55. Best score 586 bits
Score difference with first non-orthologous sequence - C.hominis:586 P.pallidum:586

Q5CGL8              	100.00%		D3AWX0              	100.00%
Bootstrap support for Q5CGL8 as seed ortholog is 100%.
Bootstrap support for D3AWX0 as seed ortholog is 100%.

Group of orthologs #56. Best score 584 bits
Score difference with first non-orthologous sequence - C.hominis:584 P.pallidum:584

Q5CEQ9              	100.00%		D3B700              	100.00%
Bootstrap support for Q5CEQ9 as seed ortholog is 100%.
Bootstrap support for D3B700 as seed ortholog is 100%.

Group of orthologs #57. Best score 579 bits
Score difference with first non-orthologous sequence - C.hominis:579 P.pallidum:579

Q5CKF2              	100.00%		D3BB83              	100.00%
Bootstrap support for Q5CKF2 as seed ortholog is 100%.
Bootstrap support for D3BB83 as seed ortholog is 100%.

Group of orthologs #58. Best score 577 bits
Score difference with first non-orthologous sequence - C.hominis:577 P.pallidum:577

Q5CGL2              	100.00%		D3BQY0              	100.00%
Bootstrap support for Q5CGL2 as seed ortholog is 100%.
Bootstrap support for D3BQY0 as seed ortholog is 100%.

Group of orthologs #59. Best score 570 bits
Score difference with first non-orthologous sequence - C.hominis:468 P.pallidum:280

Q5CLA4              	100.00%		D3B5U3              	100.00%
Bootstrap support for Q5CLA4 as seed ortholog is 100%.
Bootstrap support for D3B5U3 as seed ortholog is 100%.

Group of orthologs #60. Best score 570 bits
Score difference with first non-orthologous sequence - C.hominis:570 P.pallidum:570

Q5CNN9              	100.00%		D3B3X9              	100.00%
Bootstrap support for Q5CNN9 as seed ortholog is 100%.
Bootstrap support for D3B3X9 as seed ortholog is 100%.

Group of orthologs #61. Best score 567 bits
Score difference with first non-orthologous sequence - C.hominis:567 P.pallidum:302

Q5CIS8              	100.00%		D3BAY0              	100.00%
Bootstrap support for Q5CIS8 as seed ortholog is 100%.
Bootstrap support for D3BAY0 as seed ortholog is 44%.
Alternative seed ortholog is D3BTE7 (302 bits away from this cluster)

Group of orthologs #62. Best score 564 bits
Score difference with first non-orthologous sequence - C.hominis:564 P.pallidum:564

Q5CER1              	100.00%		D3BSJ1              	100.00%
Bootstrap support for Q5CER1 as seed ortholog is 100%.
Bootstrap support for D3BSJ1 as seed ortholog is 100%.

Group of orthologs #63. Best score 564 bits
Score difference with first non-orthologous sequence - C.hominis:564 P.pallidum:406

Q5CNZ8              	100.00%		D3BK16              	100.00%
Bootstrap support for Q5CNZ8 as seed ortholog is 100%.
Bootstrap support for D3BK16 as seed ortholog is 100%.

Group of orthologs #64. Best score 561 bits
Score difference with first non-orthologous sequence - C.hominis:561 P.pallidum:506

Q5CM20              	100.00%		D3BII3              	100.00%
Bootstrap support for Q5CM20 as seed ortholog is 100%.
Bootstrap support for D3BII3 as seed ortholog is 100%.

Group of orthologs #65. Best score 561 bits
Score difference with first non-orthologous sequence - C.hominis:477 P.pallidum:277

Q5CMN7              	100.00%		D3BPU8              	100.00%
Bootstrap support for Q5CMN7 as seed ortholog is 100%.
Bootstrap support for D3BPU8 as seed ortholog is 100%.

Group of orthologs #66. Best score 560 bits
Score difference with first non-orthologous sequence - C.hominis:560 P.pallidum:560

Q5CKG1              	100.00%		D3B474              	100.00%
Bootstrap support for Q5CKG1 as seed ortholog is 100%.
Bootstrap support for D3B474 as seed ortholog is 100%.

Group of orthologs #67. Best score 559 bits
Score difference with first non-orthologous sequence - C.hominis:559 P.pallidum:559

Q5CHW8              	100.00%		D3BKQ8              	100.00%
Bootstrap support for Q5CHW8 as seed ortholog is 100%.
Bootstrap support for D3BKQ8 as seed ortholog is 100%.

Group of orthologs #68. Best score 555 bits
Score difference with first non-orthologous sequence - C.hominis:555 P.pallidum:311

Q5CNA8              	100.00%		D3B3N8              	100.00%
Bootstrap support for Q5CNA8 as seed ortholog is 100%.
Bootstrap support for D3B3N8 as seed ortholog is 100%.

Group of orthologs #69. Best score 555 bits
Score difference with first non-orthologous sequence - C.hominis:555 P.pallidum:357

Q5CI36              	100.00%		D3BCV5              	100.00%
Bootstrap support for Q5CI36 as seed ortholog is 100%.
Bootstrap support for D3BCV5 as seed ortholog is 100%.

Group of orthologs #70. Best score 555 bits
Score difference with first non-orthologous sequence - C.hominis:555 P.pallidum:555

Q5CHG8              	100.00%		D3BE82              	100.00%
Bootstrap support for Q5CHG8 as seed ortholog is 100%.
Bootstrap support for D3BE82 as seed ortholog is 100%.

Group of orthologs #71. Best score 553 bits
Score difference with first non-orthologous sequence - C.hominis:553 P.pallidum:95

Q5CN04              	100.00%		D3BRU6              	100.00%
Bootstrap support for Q5CN04 as seed ortholog is 100%.
Bootstrap support for D3BRU6 as seed ortholog is 99%.

Group of orthologs #72. Best score 545 bits
Score difference with first non-orthologous sequence - C.hominis:545 P.pallidum:201

Q5CHT5              	100.00%		D3BP51              	100.00%
Bootstrap support for Q5CHT5 as seed ortholog is 100%.
Bootstrap support for D3BP51 as seed ortholog is 100%.

Group of orthologs #73. Best score 540 bits
Score difference with first non-orthologous sequence - C.hominis:540 P.pallidum:213

Q5CI76              	100.00%		D3BHQ7              	100.00%
Bootstrap support for Q5CI76 as seed ortholog is 100%.
Bootstrap support for D3BHQ7 as seed ortholog is 100%.

Group of orthologs #74. Best score 535 bits
Score difference with first non-orthologous sequence - C.hominis:535 P.pallidum:472

Q5CLK3              	100.00%		D3B3I9              	100.00%
Bootstrap support for Q5CLK3 as seed ortholog is 100%.
Bootstrap support for D3B3I9 as seed ortholog is 100%.

Group of orthologs #75. Best score 535 bits
Score difference with first non-orthologous sequence - C.hominis:535 P.pallidum:359

Q5CJG1              	100.00%		D3BMZ2              	100.00%
Bootstrap support for Q5CJG1 as seed ortholog is 100%.
Bootstrap support for D3BMZ2 as seed ortholog is 100%.

Group of orthologs #76. Best score 534 bits
Score difference with first non-orthologous sequence - C.hominis:78 P.pallidum:255

Q5CI65              	100.00%		D3AX78              	100.00%
                    	       		D3BVP5              	22.26%
                    	       		D3B1D8              	9.77%
                    	       		D3BF29              	9.35%
                    	       		D3B4A2              	6.43%
Bootstrap support for Q5CI65 as seed ortholog is 86%.
Bootstrap support for D3AX78 as seed ortholog is 99%.

Group of orthologs #77. Best score 534 bits
Score difference with first non-orthologous sequence - C.hominis:240 P.pallidum:240

Q5CGN7              	100.00%		D3BRF2              	100.00%
Bootstrap support for Q5CGN7 as seed ortholog is 99%.
Bootstrap support for D3BRF2 as seed ortholog is 99%.

Group of orthologs #78. Best score 532 bits
Score difference with first non-orthologous sequence - C.hominis:532 P.pallidum:532

Q5CGA8              	100.00%		D3B9F6              	100.00%
Bootstrap support for Q5CGA8 as seed ortholog is 100%.
Bootstrap support for D3B9F6 as seed ortholog is 100%.

Group of orthologs #79. Best score 528 bits
Score difference with first non-orthologous sequence - C.hominis:528 P.pallidum:528

Q5CES8              	100.00%		D3B7L4              	100.00%
Bootstrap support for Q5CES8 as seed ortholog is 100%.
Bootstrap support for D3B7L4 as seed ortholog is 100%.

Group of orthologs #80. Best score 524 bits
Score difference with first non-orthologous sequence - C.hominis:524 P.pallidum:358

Q5CJA4              	100.00%		D3BDZ2              	100.00%
Bootstrap support for Q5CJA4 as seed ortholog is 100%.
Bootstrap support for D3BDZ2 as seed ortholog is 100%.

Group of orthologs #81. Best score 519 bits
Score difference with first non-orthologous sequence - C.hominis:230 P.pallidum:210

Q5CJF4              	100.00%		D3BB39              	100.00%
Bootstrap support for Q5CJF4 as seed ortholog is 99%.
Bootstrap support for D3BB39 as seed ortholog is 99%.

Group of orthologs #82. Best score 516 bits
Score difference with first non-orthologous sequence - C.hominis:226 P.pallidum:240

Q5CKU7              	100.00%		D3B0M9              	100.00%
Bootstrap support for Q5CKU7 as seed ortholog is 99%.
Bootstrap support for D3B0M9 as seed ortholog is 100%.

Group of orthologs #83. Best score 515 bits
Score difference with first non-orthologous sequence - C.hominis:306 P.pallidum:235

Q5CKW8              	100.00%		D3BBY9              	100.00%
Bootstrap support for Q5CKW8 as seed ortholog is 100%.
Bootstrap support for D3BBY9 as seed ortholog is 100%.

Group of orthologs #84. Best score 505 bits
Score difference with first non-orthologous sequence - C.hominis:274 P.pallidum:293

Q5CMJ1              	100.00%		D3BNB9              	100.00%
Bootstrap support for Q5CMJ1 as seed ortholog is 100%.
Bootstrap support for D3BNB9 as seed ortholog is 100%.

Group of orthologs #85. Best score 501 bits
Score difference with first non-orthologous sequence - C.hominis:501 P.pallidum:406

Q5CMP9              	100.00%		D3BQN9              	100.00%
                    	       		D3B2N2              	69.38%
                    	       		D3BQP1              	52.63%
                    	       		D3B9D6              	35.69%
Bootstrap support for Q5CMP9 as seed ortholog is 100%.
Bootstrap support for D3BQN9 as seed ortholog is 100%.

Group of orthologs #86. Best score 497 bits
Score difference with first non-orthologous sequence - C.hominis:497 P.pallidum:497

Q5CKX0              	100.00%		D3B427              	100.00%
Bootstrap support for Q5CKX0 as seed ortholog is 100%.
Bootstrap support for D3B427 as seed ortholog is 100%.

Group of orthologs #87. Best score 491 bits
Score difference with first non-orthologous sequence - C.hominis:491 P.pallidum:491

Q5CIK6              	100.00%		D3BGD9              	100.00%
Bootstrap support for Q5CIK6 as seed ortholog is 100%.
Bootstrap support for D3BGD9 as seed ortholog is 100%.

Group of orthologs #88. Best score 489 bits
Score difference with first non-orthologous sequence - C.hominis:90 P.pallidum:269

Q5CKH9              	100.00%		D3BMB3              	100.00%
Bootstrap support for Q5CKH9 as seed ortholog is 99%.
Bootstrap support for D3BMB3 as seed ortholog is 100%.

Group of orthologs #89. Best score 488 bits
Score difference with first non-orthologous sequence - C.hominis:488 P.pallidum:119

Q5CNX3              	100.00%		D3AZ87              	100.00%
Bootstrap support for Q5CNX3 as seed ortholog is 100%.
Bootstrap support for D3AZ87 as seed ortholog is 99%.

Group of orthologs #90. Best score 488 bits
Score difference with first non-orthologous sequence - C.hominis:488 P.pallidum:488

Q5CN58              	100.00%		D3BQM7              	100.00%
Bootstrap support for Q5CN58 as seed ortholog is 100%.
Bootstrap support for D3BQM7 as seed ortholog is 100%.

Group of orthologs #91. Best score 485 bits
Score difference with first non-orthologous sequence - C.hominis:485 P.pallidum:123

Q5CJV9              	100.00%		D3BQP4              	100.00%
Bootstrap support for Q5CJV9 as seed ortholog is 100%.
Bootstrap support for D3BQP4 as seed ortholog is 98%.

Group of orthologs #92. Best score 481 bits
Score difference with first non-orthologous sequence - C.hominis:481 P.pallidum:114

Q5CMY1              	100.00%		D3BKM7              	100.00%
Bootstrap support for Q5CMY1 as seed ortholog is 100%.
Bootstrap support for D3BKM7 as seed ortholog is 98%.

Group of orthologs #93. Best score 480 bits
Score difference with first non-orthologous sequence - C.hominis:480 P.pallidum:480

Q5CNL9              	100.00%		D3B2V3              	100.00%
Bootstrap support for Q5CNL9 as seed ortholog is 100%.
Bootstrap support for D3B2V3 as seed ortholog is 100%.

Group of orthologs #94. Best score 478 bits
Score difference with first non-orthologous sequence - C.hominis:47 P.pallidum:478

Q5CLI0              	100.00%		D3AZM1              	100.00%
Bootstrap support for Q5CLI0 as seed ortholog is 89%.
Bootstrap support for D3AZM1 as seed ortholog is 100%.

Group of orthologs #95. Best score 472 bits
Score difference with first non-orthologous sequence - C.hominis:472 P.pallidum:472

Q5CN90              	100.00%		D3B5W3              	100.00%
Bootstrap support for Q5CN90 as seed ortholog is 100%.
Bootstrap support for D3B5W3 as seed ortholog is 100%.

Group of orthologs #96. Best score 472 bits
Score difference with first non-orthologous sequence - C.hominis:472 P.pallidum:472

Q5CN07              	100.00%		D3BAM6              	100.00%
Bootstrap support for Q5CN07 as seed ortholog is 100%.
Bootstrap support for D3BAM6 as seed ortholog is 100%.

Group of orthologs #97. Best score 468 bits
Score difference with first non-orthologous sequence - C.hominis:468 P.pallidum:315

Q5CNR4              	100.00%		D3BR60              	100.00%
Bootstrap support for Q5CNR4 as seed ortholog is 100%.
Bootstrap support for D3BR60 as seed ortholog is 100%.

Group of orthologs #98. Best score 463 bits
Score difference with first non-orthologous sequence - C.hominis:463 P.pallidum:401

Q5CGC0              	100.00%		D3B9H8              	100.00%
Bootstrap support for Q5CGC0 as seed ortholog is 100%.
Bootstrap support for D3B9H8 as seed ortholog is 100%.

Group of orthologs #99. Best score 460 bits
Score difference with first non-orthologous sequence - C.hominis:255 P.pallidum:265

Q5CG67              	100.00%		D3BM62              	100.00%
Bootstrap support for Q5CG67 as seed ortholog is 100%.
Bootstrap support for D3BM62 as seed ortholog is 100%.

Group of orthologs #100. Best score 459 bits
Score difference with first non-orthologous sequence - C.hominis:459 P.pallidum:459

Q5CP31              	100.00%		D3B072              	100.00%
Bootstrap support for Q5CP31 as seed ortholog is 100%.
Bootstrap support for D3B072 as seed ortholog is 100%.

Group of orthologs #101. Best score 456 bits
Score difference with first non-orthologous sequence - C.hominis:456 P.pallidum:456

Q5CIF5              	100.00%		D3BEX2              	100.00%
Bootstrap support for Q5CIF5 as seed ortholog is 100%.
Bootstrap support for D3BEX2 as seed ortholog is 100%.

Group of orthologs #102. Best score 453 bits
Score difference with first non-orthologous sequence - C.hominis:56 P.pallidum:389

Q5CKG0              	100.00%		D3BDA3              	100.00%
Bootstrap support for Q5CKG0 as seed ortholog is 99%.
Bootstrap support for D3BDA3 as seed ortholog is 100%.

Group of orthologs #103. Best score 453 bits
Score difference with first non-orthologous sequence - C.hominis:186 P.pallidum:36

Q5CMT2              	100.00%		D3BLI7              	100.00%
Bootstrap support for Q5CMT2 as seed ortholog is 100%.
Bootstrap support for D3BLI7 as seed ortholog is 91%.

Group of orthologs #104. Best score 453 bits
Score difference with first non-orthologous sequence - C.hominis:263 P.pallidum:180

Q5CP59              	100.00%		D3BSG3              	100.00%
Bootstrap support for Q5CP59 as seed ortholog is 100%.
Bootstrap support for D3BSG3 as seed ortholog is 99%.

Group of orthologs #105. Best score 451 bits
Score difference with first non-orthologous sequence - C.hominis:451 P.pallidum:116

Q5CFY6              	100.00%		D3B3K7              	100.00%
Bootstrap support for Q5CFY6 as seed ortholog is 100%.
Bootstrap support for D3B3K7 as seed ortholog is 99%.

Group of orthologs #106. Best score 450 bits
Score difference with first non-orthologous sequence - C.hominis:154 P.pallidum:82

Q5CHW7              	100.00%		D3BKP8              	100.00%
Bootstrap support for Q5CHW7 as seed ortholog is 100%.
Bootstrap support for D3BKP8 as seed ortholog is 99%.

Group of orthologs #107. Best score 443 bits
Score difference with first non-orthologous sequence - C.hominis:443 P.pallidum:443

Q5CNS9              	100.00%		D3BBR7              	100.00%
Bootstrap support for Q5CNS9 as seed ortholog is 100%.
Bootstrap support for D3BBR7 as seed ortholog is 100%.

Group of orthologs #108. Best score 442 bits
Score difference with first non-orthologous sequence - C.hominis:442 P.pallidum:442

Q5CLX8              	100.00%		D3BAK8              	100.00%
Bootstrap support for Q5CLX8 as seed ortholog is 100%.
Bootstrap support for D3BAK8 as seed ortholog is 100%.

Group of orthologs #109. Best score 435 bits
Score difference with first non-orthologous sequence - C.hominis:130 P.pallidum:161

Q5CGM4              	100.00%		D3BVG6              	100.00%
                    	       		D3AY71              	18.34%
Bootstrap support for Q5CGM4 as seed ortholog is 95%.
Bootstrap support for D3BVG6 as seed ortholog is 99%.

Group of orthologs #110. Best score 434 bits
Score difference with first non-orthologous sequence - C.hominis:434 P.pallidum:434

Q5CFE3              	100.00%		D3BMS6              	100.00%
Bootstrap support for Q5CFE3 as seed ortholog is 100%.
Bootstrap support for D3BMS6 as seed ortholog is 100%.

Group of orthologs #111. Best score 433 bits
Score difference with first non-orthologous sequence - C.hominis:433 P.pallidum:433

Q5CGH5              	100.00%		D3B2T4              	100.00%
Bootstrap support for Q5CGH5 as seed ortholog is 100%.
Bootstrap support for D3B2T4 as seed ortholog is 100%.

Group of orthologs #112. Best score 432 bits
Score difference with first non-orthologous sequence - C.hominis:432 P.pallidum:178

Q5CKW6              	100.00%		D3B8W8              	100.00%
                    	       		D3AYG7              	57.81%
                    	       		D3BFQ9              	37.06%
Bootstrap support for Q5CKW6 as seed ortholog is 100%.
Bootstrap support for D3B8W8 as seed ortholog is 100%.

Group of orthologs #113. Best score 431 bits
Score difference with first non-orthologous sequence - C.hominis:431 P.pallidum:303

Q5CG32              	100.00%		D3B3C8              	100.00%
Bootstrap support for Q5CG32 as seed ortholog is 100%.
Bootstrap support for D3B3C8 as seed ortholog is 100%.

Group of orthologs #114. Best score 431 bits
Score difference with first non-orthologous sequence - C.hominis:431 P.pallidum:431

Q5CNT1              	100.00%		D3AWW1              	100.00%
Bootstrap support for Q5CNT1 as seed ortholog is 100%.
Bootstrap support for D3AWW1 as seed ortholog is 100%.

Group of orthologs #115. Best score 430 bits
Score difference with first non-orthologous sequence - C.hominis:430 P.pallidum:430

Q5CKC5              	100.00%		D3BF15              	100.00%
Bootstrap support for Q5CKC5 as seed ortholog is 100%.
Bootstrap support for D3BF15 as seed ortholog is 100%.

Group of orthologs #116. Best score 428 bits
Score difference with first non-orthologous sequence - C.hominis:145 P.pallidum:265

Q5CP78              	100.00%		D3BK58              	100.00%
Bootstrap support for Q5CP78 as seed ortholog is 100%.
Bootstrap support for D3BK58 as seed ortholog is 100%.

Group of orthologs #117. Best score 426 bits
Score difference with first non-orthologous sequence - C.hominis:426 P.pallidum:426

Q5CMN2              	100.00%		D3BQM3              	100.00%
Bootstrap support for Q5CMN2 as seed ortholog is 100%.
Bootstrap support for D3BQM3 as seed ortholog is 100%.

Group of orthologs #118. Best score 421 bits
Score difference with first non-orthologous sequence - C.hominis:421 P.pallidum:421

Q5CJJ8              	100.00%		D3BV45              	100.00%
Bootstrap support for Q5CJJ8 as seed ortholog is 100%.
Bootstrap support for D3BV45 as seed ortholog is 100%.

Group of orthologs #119. Best score 420 bits
Score difference with first non-orthologous sequence - C.hominis:420 P.pallidum:151

Q5CK06              	100.00%		D3BBF7              	100.00%
Bootstrap support for Q5CK06 as seed ortholog is 100%.
Bootstrap support for D3BBF7 as seed ortholog is 98%.

Group of orthologs #120. Best score 416 bits
Score difference with first non-orthologous sequence - C.hominis:416 P.pallidum:416

Q5CFZ1              	100.00%		D3AZ62              	100.00%
Bootstrap support for Q5CFZ1 as seed ortholog is 100%.
Bootstrap support for D3AZ62 as seed ortholog is 100%.

Group of orthologs #121. Best score 415 bits
Score difference with first non-orthologous sequence - C.hominis:415 P.pallidum:236

Q5CHW9              	100.00%		D3AXY2              	100.00%
Bootstrap support for Q5CHW9 as seed ortholog is 100%.
Bootstrap support for D3AXY2 as seed ortholog is 100%.

Group of orthologs #122. Best score 413 bits
Score difference with first non-orthologous sequence - C.hominis:413 P.pallidum:305

Q5CI59              	100.00%		D3B6G4              	100.00%
Bootstrap support for Q5CI59 as seed ortholog is 100%.
Bootstrap support for D3B6G4 as seed ortholog is 100%.

Group of orthologs #123. Best score 412 bits
Score difference with first non-orthologous sequence - C.hominis:412 P.pallidum:101

Q5CFQ7              	100.00%		D3B313              	100.00%
Bootstrap support for Q5CFQ7 as seed ortholog is 100%.
Bootstrap support for D3B313 as seed ortholog is 98%.

Group of orthologs #124. Best score 410 bits
Score difference with first non-orthologous sequence - C.hominis:410 P.pallidum:410

Q5CGM0              	100.00%		D3BB47              	100.00%
Bootstrap support for Q5CGM0 as seed ortholog is 100%.
Bootstrap support for D3BB47 as seed ortholog is 100%.

Group of orthologs #125. Best score 408 bits
Score difference with first non-orthologous sequence - C.hominis:21 P.pallidum:181

Q5CHQ5              	100.00%		D3BGI5              	100.00%
                    	       		D3BK04              	21.88%
                    	       		D3BA71              	21.12%
                    	       		D3BKB9              	18.60%
                    	       		D3BPD4              	16.39%
                    	       		D3B008              	8.58%
Bootstrap support for Q5CHQ5 as seed ortholog is 61%.
Alternative seed ortholog is Q5CMR4 (21 bits away from this cluster)
Bootstrap support for D3BGI5 as seed ortholog is 99%.

Group of orthologs #126. Best score 408 bits
Score difference with first non-orthologous sequence - C.hominis:408 P.pallidum:408

Q5CPC7              	100.00%		D3AY91              	100.00%
Bootstrap support for Q5CPC7 as seed ortholog is 100%.
Bootstrap support for D3AY91 as seed ortholog is 100%.

Group of orthologs #127. Best score 408 bits
Score difference with first non-orthologous sequence - C.hominis:408 P.pallidum:408

Q5CLZ5              	100.00%		D3BRS6              	100.00%
Bootstrap support for Q5CLZ5 as seed ortholog is 100%.
Bootstrap support for D3BRS6 as seed ortholog is 100%.

Group of orthologs #128. Best score 407 bits
Score difference with first non-orthologous sequence - C.hominis:407 P.pallidum:407

Q5CI16              	100.00%		D3BNY4              	100.00%
Bootstrap support for Q5CI16 as seed ortholog is 100%.
Bootstrap support for D3BNY4 as seed ortholog is 100%.

Group of orthologs #129. Best score 406 bits
Score difference with first non-orthologous sequence - C.hominis:406 P.pallidum:289

Q5CHB7              	100.00%		D3B5X2              	100.00%
Bootstrap support for Q5CHB7 as seed ortholog is 100%.
Bootstrap support for D3B5X2 as seed ortholog is 100%.

Group of orthologs #130. Best score 406 bits
Score difference with first non-orthologous sequence - C.hominis:406 P.pallidum:334

Q5CK12              	100.00%		D3BQX1              	100.00%
Bootstrap support for Q5CK12 as seed ortholog is 100%.
Bootstrap support for D3BQX1 as seed ortholog is 100%.

Group of orthologs #131. Best score 404 bits
Score difference with first non-orthologous sequence - C.hominis:404 P.pallidum:404

Q5CHM0              	100.00%		D3BUD3              	100.00%
                    	       		D3BUC4              	52.89%
Bootstrap support for Q5CHM0 as seed ortholog is 100%.
Bootstrap support for D3BUD3 as seed ortholog is 100%.

Group of orthologs #132. Best score 404 bits
Score difference with first non-orthologous sequence - C.hominis:404 P.pallidum:160

Q5CNH6              	100.00%		D3AY64              	100.00%
Bootstrap support for Q5CNH6 as seed ortholog is 100%.
Bootstrap support for D3AY64 as seed ortholog is 99%.

Group of orthologs #133. Best score 403 bits
Score difference with first non-orthologous sequence - C.hominis:403 P.pallidum:403

Q5CG58              	100.00%		D3B344              	100.00%
Bootstrap support for Q5CG58 as seed ortholog is 100%.
Bootstrap support for D3B344 as seed ortholog is 100%.

Group of orthologs #134. Best score 403 bits
Score difference with first non-orthologous sequence - C.hominis:403 P.pallidum:180

Q5CH49              	100.00%		D3BAU8              	100.00%
Bootstrap support for Q5CH49 as seed ortholog is 100%.
Bootstrap support for D3BAU8 as seed ortholog is 99%.

Group of orthologs #135. Best score 403 bits
Score difference with first non-orthologous sequence - C.hominis:403 P.pallidum:344

Q5CMW6              	100.00%		D3BCX3              	100.00%
Bootstrap support for Q5CMW6 as seed ortholog is 100%.
Bootstrap support for D3BCX3 as seed ortholog is 100%.

Group of orthologs #136. Best score 402 bits
Score difference with first non-orthologous sequence - C.hominis:402 P.pallidum:402

Q5CHV3              	100.00%		D3B0M1              	100.00%
Bootstrap support for Q5CHV3 as seed ortholog is 100%.
Bootstrap support for D3B0M1 as seed ortholog is 100%.

Group of orthologs #137. Best score 402 bits
Score difference with first non-orthologous sequence - C.hominis:402 P.pallidum:402

Q5CMF7              	100.00%		D3BKL2              	100.00%
Bootstrap support for Q5CMF7 as seed ortholog is 100%.
Bootstrap support for D3BKL2 as seed ortholog is 100%.

Group of orthologs #138. Best score 398 bits
Score difference with first non-orthologous sequence - C.hominis:398 P.pallidum:156

Q5CNH0              	100.00%		D3AZS9              	100.00%
Bootstrap support for Q5CNH0 as seed ortholog is 100%.
Bootstrap support for D3AZS9 as seed ortholog is 99%.

Group of orthologs #139. Best score 396 bits
Score difference with first non-orthologous sequence - C.hominis:396 P.pallidum:200

Q5CK04              	100.00%		D3AYA4              	100.00%
Bootstrap support for Q5CK04 as seed ortholog is 100%.
Bootstrap support for D3AYA4 as seed ortholog is 99%.

Group of orthologs #140. Best score 396 bits
Score difference with first non-orthologous sequence - C.hominis:396 P.pallidum:396

Q5CGV5              	100.00%		D3B866              	100.00%
Bootstrap support for Q5CGV5 as seed ortholog is 100%.
Bootstrap support for D3B866 as seed ortholog is 100%.

Group of orthologs #141. Best score 395 bits
Score difference with first non-orthologous sequence - C.hominis:395 P.pallidum:395

Q5CN97              	100.00%		D3BVL5              	100.00%
Bootstrap support for Q5CN97 as seed ortholog is 100%.
Bootstrap support for D3BVL5 as seed ortholog is 100%.

Group of orthologs #142. Best score 393 bits
Score difference with first non-orthologous sequence - C.hominis:292 P.pallidum:263

Q5CLD2              	100.00%		D3BMN0              	100.00%
Bootstrap support for Q5CLD2 as seed ortholog is 100%.
Bootstrap support for D3BMN0 as seed ortholog is 100%.

Group of orthologs #143. Best score 391 bits
Score difference with first non-orthologous sequence - C.hominis:391 P.pallidum:287

Q5CIP4              	100.00%		D3BIJ9              	100.00%
Bootstrap support for Q5CIP4 as seed ortholog is 100%.
Bootstrap support for D3BIJ9 as seed ortholog is 100%.

Group of orthologs #144. Best score 389 bits
Score difference with first non-orthologous sequence - C.hominis:389 P.pallidum:207

Q5CGY3              	100.00%		D3AZW1              	100.00%
Bootstrap support for Q5CGY3 as seed ortholog is 100%.
Bootstrap support for D3AZW1 as seed ortholog is 99%.

Group of orthologs #145. Best score 388 bits
Score difference with first non-orthologous sequence - C.hominis:274 P.pallidum:388

Q5CE53              	100.00%		D3BUD7              	100.00%
                    	       		D3BKB8              	38.83%
Bootstrap support for Q5CE53 as seed ortholog is 100%.
Bootstrap support for D3BUD7 as seed ortholog is 100%.

Group of orthologs #146. Best score 386 bits
Score difference with first non-orthologous sequence - C.hominis:386 P.pallidum:386

Q5CEM8              	100.00%		D3BKG1              	100.00%
Bootstrap support for Q5CEM8 as seed ortholog is 100%.
Bootstrap support for D3BKG1 as seed ortholog is 100%.

Group of orthologs #147. Best score 386 bits
Score difference with first non-orthologous sequence - C.hominis:88 P.pallidum:51

Q5CKW2              	100.00%		D3BMU7              	100.00%
Bootstrap support for Q5CKW2 as seed ortholog is 99%.
Bootstrap support for D3BMU7 as seed ortholog is 96%.

Group of orthologs #148. Best score 384 bits
Score difference with first non-orthologous sequence - C.hominis:384 P.pallidum:384

Q5CEV4              	100.00%		D3B3Z7              	100.00%
Bootstrap support for Q5CEV4 as seed ortholog is 100%.
Bootstrap support for D3B3Z7 as seed ortholog is 100%.

Group of orthologs #149. Best score 382 bits
Score difference with first non-orthologous sequence - C.hominis:382 P.pallidum:382

Q5CHA9              	100.00%		D3B6I9              	100.00%
Bootstrap support for Q5CHA9 as seed ortholog is 100%.
Bootstrap support for D3B6I9 as seed ortholog is 100%.

Group of orthologs #150. Best score 381 bits
Score difference with first non-orthologous sequence - C.hominis:52 P.pallidum:287

Q5CGE0              	100.00%		D3BI15              	100.00%
Bootstrap support for Q5CGE0 as seed ortholog is 96%.
Bootstrap support for D3BI15 as seed ortholog is 100%.

Group of orthologs #151. Best score 380 bits
Score difference with first non-orthologous sequence - C.hominis:380 P.pallidum:380

Q5CMP8              	100.00%		D3BR13              	100.00%
Bootstrap support for Q5CMP8 as seed ortholog is 100%.
Bootstrap support for D3BR13 as seed ortholog is 100%.

Group of orthologs #152. Best score 379 bits
Score difference with first non-orthologous sequence - C.hominis:379 P.pallidum:379

Q5CNW6              	100.00%		D3BMN8              	100.00%
Bootstrap support for Q5CNW6 as seed ortholog is 100%.
Bootstrap support for D3BMN8 as seed ortholog is 100%.

Group of orthologs #153. Best score 378 bits
Score difference with first non-orthologous sequence - C.hominis:378 P.pallidum:192

Q5CGC1              	100.00%		D3BBD1              	100.00%
Bootstrap support for Q5CGC1 as seed ortholog is 100%.
Bootstrap support for D3BBD1 as seed ortholog is 99%.

Group of orthologs #154. Best score 373 bits
Score difference with first non-orthologous sequence - C.hominis:286 P.pallidum:31

Q5CKM3              	100.00%		D3BBA2              	100.00%
                    	       		D3BNB3              	29.08%
                    	       		D3AW28              	5.85%
Bootstrap support for Q5CKM3 as seed ortholog is 100%.
Bootstrap support for D3BBA2 as seed ortholog is 60%.
Alternative seed ortholog is D3BT92 (31 bits away from this cluster)

Group of orthologs #155. Best score 373 bits
Score difference with first non-orthologous sequence - C.hominis:373 P.pallidum:228

Q5CNI6              	100.00%		D3B2K0              	100.00%
Bootstrap support for Q5CNI6 as seed ortholog is 100%.
Bootstrap support for D3B2K0 as seed ortholog is 100%.

Group of orthologs #156. Best score 372 bits
Score difference with first non-orthologous sequence - C.hominis:372 P.pallidum:280

Q5CIU1              	100.00%		D3BCL2              	100.00%
Bootstrap support for Q5CIU1 as seed ortholog is 100%.
Bootstrap support for D3BCL2 as seed ortholog is 100%.

Group of orthologs #157. Best score 371 bits
Score difference with first non-orthologous sequence - C.hominis:270 P.pallidum:86

Q5CHH5              	100.00%		D3B9A5              	100.00%
Bootstrap support for Q5CHH5 as seed ortholog is 100%.
Bootstrap support for D3B9A5 as seed ortholog is 99%.

Group of orthologs #158. Best score 370 bits
Score difference with first non-orthologous sequence - C.hominis:370 P.pallidum:175

Q5CJA8              	100.00%		D3BM76              	100.00%
Bootstrap support for Q5CJA8 as seed ortholog is 100%.
Bootstrap support for D3BM76 as seed ortholog is 99%.

Group of orthologs #159. Best score 367 bits
Score difference with first non-orthologous sequence - C.hominis:140 P.pallidum:149

Q5CIG0              	100.00%		D3B626              	100.00%
Bootstrap support for Q5CIG0 as seed ortholog is 99%.
Bootstrap support for D3B626 as seed ortholog is 100%.

Group of orthologs #160. Best score 366 bits
Score difference with first non-orthologous sequence - C.hominis:366 P.pallidum:220

Q5CE61              	100.00%		D3BP16              	100.00%
Bootstrap support for Q5CE61 as seed ortholog is 100%.
Bootstrap support for D3BP16 as seed ortholog is 99%.

Group of orthologs #161. Best score 365 bits
Score difference with first non-orthologous sequence - C.hominis:365 P.pallidum:365

Q5CDQ3              	100.00%		D3AVV8              	100.00%
Bootstrap support for Q5CDQ3 as seed ortholog is 100%.
Bootstrap support for D3AVV8 as seed ortholog is 100%.

Group of orthologs #162. Best score 364 bits
Score difference with first non-orthologous sequence - C.hominis:364 P.pallidum:364

Q5CIJ4              	100.00%		D3AY94              	100.00%
Bootstrap support for Q5CIJ4 as seed ortholog is 100%.
Bootstrap support for D3AY94 as seed ortholog is 100%.

Group of orthologs #163. Best score 361 bits
Score difference with first non-orthologous sequence - C.hominis:361 P.pallidum:361

Q5CGB0              	100.00%		D3BK20              	100.00%
Bootstrap support for Q5CGB0 as seed ortholog is 100%.
Bootstrap support for D3BK20 as seed ortholog is 100%.

Group of orthologs #164. Best score 361 bits
Score difference with first non-orthologous sequence - C.hominis:171 P.pallidum:103

Q5CM39              	100.00%		D3BUD0              	100.00%
Bootstrap support for Q5CM39 as seed ortholog is 99%.
Bootstrap support for D3BUD0 as seed ortholog is 97%.

Group of orthologs #165. Best score 356 bits
Score difference with first non-orthologous sequence - C.hominis:356 P.pallidum:356

Q5CEB9              	100.00%		D3BNT7              	100.00%
Bootstrap support for Q5CEB9 as seed ortholog is 100%.
Bootstrap support for D3BNT7 as seed ortholog is 100%.

Group of orthologs #166. Best score 355 bits
Score difference with first non-orthologous sequence - C.hominis:264 P.pallidum:277

Q5CLB1              	100.00%		D3BE81              	100.00%
                    	       		D3BCT5              	35.19%
Bootstrap support for Q5CLB1 as seed ortholog is 100%.
Bootstrap support for D3BE81 as seed ortholog is 100%.

Group of orthologs #167. Best score 353 bits
Score difference with first non-orthologous sequence - C.hominis:353 P.pallidum:224

Q5CFS7              	100.00%		D3AZ75              	100.00%
Bootstrap support for Q5CFS7 as seed ortholog is 100%.
Bootstrap support for D3AZ75 as seed ortholog is 100%.

Group of orthologs #168. Best score 351 bits
Score difference with first non-orthologous sequence - C.hominis:351 P.pallidum:154

Q5CMJ6              	100.00%		D3AYZ6              	100.00%
Bootstrap support for Q5CMJ6 as seed ortholog is 100%.
Bootstrap support for D3AYZ6 as seed ortholog is 99%.

Group of orthologs #169. Best score 351 bits
Score difference with first non-orthologous sequence - C.hominis:351 P.pallidum:211

Q5CH60              	100.00%		D3B4X1              	100.00%
Bootstrap support for Q5CH60 as seed ortholog is 100%.
Bootstrap support for D3B4X1 as seed ortholog is 99%.

Group of orthologs #170. Best score 351 bits
Score difference with first non-orthologous sequence - C.hominis:351 P.pallidum:220

Q5CK95              	100.00%		D3B2H8              	100.00%
Bootstrap support for Q5CK95 as seed ortholog is 100%.
Bootstrap support for D3B2H8 as seed ortholog is 100%.

Group of orthologs #171. Best score 351 bits
Score difference with first non-orthologous sequence - C.hominis:351 P.pallidum:351

Q5CGW7              	100.00%		D3BUT9              	100.00%
Bootstrap support for Q5CGW7 as seed ortholog is 100%.
Bootstrap support for D3BUT9 as seed ortholog is 100%.

Group of orthologs #172. Best score 347 bits
Score difference with first non-orthologous sequence - C.hominis:347 P.pallidum:165

Q5CF20              	100.00%		D3AZ71              	100.00%
                    	       		D3B2D6              	100.00%
Bootstrap support for Q5CF20 as seed ortholog is 100%.
Bootstrap support for D3AZ71 as seed ortholog is 99%.
Bootstrap support for D3B2D6 as seed ortholog is 99%.

Group of orthologs #173. Best score 347 bits
Score difference with first non-orthologous sequence - C.hominis:347 P.pallidum:276

Q5CGD2              	100.00%		D3B3W0              	100.00%
Bootstrap support for Q5CGD2 as seed ortholog is 100%.
Bootstrap support for D3B3W0 as seed ortholog is 100%.

Group of orthologs #174. Best score 346 bits
Score difference with first non-orthologous sequence - C.hominis:346 P.pallidum:346

Q5CIV6              	100.00%		D3BQ86              	100.00%
Bootstrap support for Q5CIV6 as seed ortholog is 100%.
Bootstrap support for D3BQ86 as seed ortholog is 100%.

Group of orthologs #175. Best score 345 bits
Score difference with first non-orthologous sequence - C.hominis:345 P.pallidum:165

Q5CHP5              	100.00%		D3BN72              	100.00%
Bootstrap support for Q5CHP5 as seed ortholog is 100%.
Bootstrap support for D3BN72 as seed ortholog is 99%.

Group of orthologs #176. Best score 344 bits
Score difference with first non-orthologous sequence - C.hominis:344 P.pallidum:344

Q5CG04              	100.00%		D3B7T8              	100.00%
Bootstrap support for Q5CG04 as seed ortholog is 100%.
Bootstrap support for D3B7T8 as seed ortholog is 100%.

Group of orthologs #177. Best score 344 bits
Score difference with first non-orthologous sequence - C.hominis:344 P.pallidum:344

Q5CIE5              	100.00%		D3B7I3              	100.00%
Bootstrap support for Q5CIE5 as seed ortholog is 100%.
Bootstrap support for D3B7I3 as seed ortholog is 100%.

Group of orthologs #178. Best score 343 bits
Score difference with first non-orthologous sequence - C.hominis:343 P.pallidum:143

Q5CLU3              	100.00%		D3BKC5              	100.00%
Bootstrap support for Q5CLU3 as seed ortholog is 100%.
Bootstrap support for D3BKC5 as seed ortholog is 99%.

Group of orthologs #179. Best score 339 bits
Score difference with first non-orthologous sequence - C.hominis:163 P.pallidum:339

Q5CM80              	100.00%		D3B2S5              	100.00%
                    	       		D3BUR5              	54.99%
Bootstrap support for Q5CM80 as seed ortholog is 100%.
Bootstrap support for D3B2S5 as seed ortholog is 100%.

Group of orthologs #180. Best score 338 bits
Score difference with first non-orthologous sequence - C.hominis:338 P.pallidum:338

Q5CIT9              	100.00%		D3BH81              	100.00%
Bootstrap support for Q5CIT9 as seed ortholog is 100%.
Bootstrap support for D3BH81 as seed ortholog is 100%.

Group of orthologs #181. Best score 336 bits
Score difference with first non-orthologous sequence - C.hominis:336 P.pallidum:257

Q5CIQ8              	100.00%		D3AYY7              	100.00%
Bootstrap support for Q5CIQ8 as seed ortholog is 100%.
Bootstrap support for D3AYY7 as seed ortholog is 100%.

Group of orthologs #182. Best score 335 bits
Score difference with first non-orthologous sequence - C.hominis:124 P.pallidum:68

Q5CNJ7              	100.00%		D3AWF9              	100.00%
Bootstrap support for Q5CNJ7 as seed ortholog is 99%.
Bootstrap support for D3AWF9 as seed ortholog is 93%.

Group of orthologs #183. Best score 334 bits
Score difference with first non-orthologous sequence - C.hominis:277 P.pallidum:67

Q5CLX5              	100.00%		D3AVQ3              	100.00%
Bootstrap support for Q5CLX5 as seed ortholog is 100%.
Bootstrap support for D3AVQ3 as seed ortholog is 99%.

Group of orthologs #184. Best score 334 bits
Score difference with first non-orthologous sequence - C.hominis:334 P.pallidum:334

Q5CGS3              	100.00%		D3BBM5              	100.00%
Bootstrap support for Q5CGS3 as seed ortholog is 100%.
Bootstrap support for D3BBM5 as seed ortholog is 100%.

Group of orthologs #185. Best score 330 bits
Score difference with first non-orthologous sequence - C.hominis:330 P.pallidum:330

Q5CJR9              	100.00%		D3BFD7              	100.00%
Bootstrap support for Q5CJR9 as seed ortholog is 100%.
Bootstrap support for D3BFD7 as seed ortholog is 100%.

Group of orthologs #186. Best score 329 bits
Score difference with first non-orthologous sequence - C.hominis:213 P.pallidum:130

Q5CP90              	100.00%		D3AVW9              	100.00%
Bootstrap support for Q5CP90 as seed ortholog is 100%.
Bootstrap support for D3AVW9 as seed ortholog is 99%.

Group of orthologs #187. Best score 328 bits
Score difference with first non-orthologous sequence - C.hominis:328 P.pallidum:328

Q5CLZ3              	100.00%		D3B6R2              	100.00%
Bootstrap support for Q5CLZ3 as seed ortholog is 100%.
Bootstrap support for D3B6R2 as seed ortholog is 100%.

Group of orthologs #188. Best score 328 bits
Score difference with first non-orthologous sequence - C.hominis:328 P.pallidum:328

Q5CN63              	100.00%		D3BP70              	100.00%
Bootstrap support for Q5CN63 as seed ortholog is 100%.
Bootstrap support for D3BP70 as seed ortholog is 100%.

Group of orthologs #189. Best score 327 bits
Score difference with first non-orthologous sequence - C.hominis:327 P.pallidum:327

Q5CIR1              	100.00%		D3AXX5              	100.00%
Bootstrap support for Q5CIR1 as seed ortholog is 100%.
Bootstrap support for D3AXX5 as seed ortholog is 100%.

Group of orthologs #190. Best score 327 bits
Score difference with first non-orthologous sequence - C.hominis:327 P.pallidum:153

Q5CGV2              	100.00%		D3B846              	100.00%
Bootstrap support for Q5CGV2 as seed ortholog is 100%.
Bootstrap support for D3B846 as seed ortholog is 99%.

Group of orthologs #191. Best score 326 bits
Score difference with first non-orthologous sequence - C.hominis:326 P.pallidum:326

Q5CJN6              	100.00%		D3BPP7              	100.00%
                    	       		D3B4K1              	13.76%
Bootstrap support for Q5CJN6 as seed ortholog is 100%.
Bootstrap support for D3BPP7 as seed ortholog is 100%.

Group of orthologs #192. Best score 326 bits
Score difference with first non-orthologous sequence - C.hominis:326 P.pallidum:326

Q5CNV5              	100.00%		D3AY61              	100.00%
Bootstrap support for Q5CNV5 as seed ortholog is 100%.
Bootstrap support for D3AY61 as seed ortholog is 100%.

Group of orthologs #193. Best score 324 bits
Score difference with first non-orthologous sequence - C.hominis:324 P.pallidum:106

Q5CJU4              	100.00%		D3B485              	100.00%
Bootstrap support for Q5CJU4 as seed ortholog is 100%.
Bootstrap support for D3B485 as seed ortholog is 99%.

Group of orthologs #194. Best score 321 bits
Score difference with first non-orthologous sequence - C.hominis:321 P.pallidum:321

Q5CM34              	100.00%		D3B7J9              	100.00%
Bootstrap support for Q5CM34 as seed ortholog is 100%.
Bootstrap support for D3B7J9 as seed ortholog is 100%.

Group of orthologs #195. Best score 321 bits
Score difference with first non-orthologous sequence - C.hominis:321 P.pallidum:232

Q5CHE8              	100.00%		D3BQJ7              	100.00%
Bootstrap support for Q5CHE8 as seed ortholog is 100%.
Bootstrap support for D3BQJ7 as seed ortholog is 100%.

Group of orthologs #196. Best score 320 bits
Score difference with first non-orthologous sequence - C.hominis:320 P.pallidum:320

Q5CIL3              	100.00%		D3B264              	100.00%
Bootstrap support for Q5CIL3 as seed ortholog is 100%.
Bootstrap support for D3B264 as seed ortholog is 100%.

Group of orthologs #197. Best score 316 bits
Score difference with first non-orthologous sequence - C.hominis:316 P.pallidum:316

Q5CIY0              	100.00%		D3BQ29              	100.00%
Bootstrap support for Q5CIY0 as seed ortholog is 100%.
Bootstrap support for D3BQ29 as seed ortholog is 100%.

Group of orthologs #198. Best score 314 bits
Score difference with first non-orthologous sequence - C.hominis:87 P.pallidum:314

Q5CNB9              	100.00%		D3B0T3              	100.00%
Bootstrap support for Q5CNB9 as seed ortholog is 97%.
Bootstrap support for D3B0T3 as seed ortholog is 100%.

Group of orthologs #199. Best score 314 bits
Score difference with first non-orthologous sequence - C.hominis:130 P.pallidum:147

Q5CL88              	100.00%		D3B6C6              	100.00%
Bootstrap support for Q5CL88 as seed ortholog is 99%.
Bootstrap support for D3B6C6 as seed ortholog is 99%.

Group of orthologs #200. Best score 313 bits
Score difference with first non-orthologous sequence - C.hominis:140 P.pallidum:31

Q5CJC4              	100.00%		D3B501              	100.00%
Bootstrap support for Q5CJC4 as seed ortholog is 100%.
Bootstrap support for D3B501 as seed ortholog is 88%.

Group of orthologs #201. Best score 312 bits
Score difference with first non-orthologous sequence - C.hominis:158 P.pallidum:124

Q5CL28              	100.00%		D3B2S4              	100.00%
Bootstrap support for Q5CL28 as seed ortholog is 99%.
Bootstrap support for D3B2S4 as seed ortholog is 99%.

Group of orthologs #202. Best score 311 bits
Score difference with first non-orthologous sequence - C.hominis:311 P.pallidum:225

Q5CKS8              	100.00%		D3BE97              	100.00%
Bootstrap support for Q5CKS8 as seed ortholog is 100%.
Bootstrap support for D3BE97 as seed ortholog is 100%.

Group of orthologs #203. Best score 307 bits
Score difference with first non-orthologous sequence - C.hominis:184 P.pallidum:133

Q5CKZ5              	100.00%		D3B110              	100.00%
Bootstrap support for Q5CKZ5 as seed ortholog is 100%.
Bootstrap support for D3B110 as seed ortholog is 99%.

Group of orthologs #204. Best score 307 bits
Score difference with first non-orthologous sequence - C.hominis:307 P.pallidum:307

Q5CLM2              	100.00%		D3B0J2              	100.00%
Bootstrap support for Q5CLM2 as seed ortholog is 100%.
Bootstrap support for D3B0J2 as seed ortholog is 100%.

Group of orthologs #205. Best score 306 bits
Score difference with first non-orthologous sequence - C.hominis:306 P.pallidum:100

Q5CP36              	100.00%		D3BEH3              	100.00%
Bootstrap support for Q5CP36 as seed ortholog is 100%.
Bootstrap support for D3BEH3 as seed ortholog is 95%.

Group of orthologs #206. Best score 304 bits
Score difference with first non-orthologous sequence - C.hominis:304 P.pallidum:96

Q5CEK7              	100.00%		D3B8P9              	100.00%
Bootstrap support for Q5CEK7 as seed ortholog is 100%.
Bootstrap support for D3B8P9 as seed ortholog is 98%.

Group of orthologs #207. Best score 304 bits
Score difference with first non-orthologous sequence - C.hominis:304 P.pallidum:304

Q5CME0              	100.00%		D3BNE7              	100.00%
Bootstrap support for Q5CME0 as seed ortholog is 100%.
Bootstrap support for D3BNE7 as seed ortholog is 100%.

Group of orthologs #208. Best score 302 bits
Score difference with first non-orthologous sequence - C.hominis:258 P.pallidum:72

Q5CJ45              	100.00%		D3B3T9              	100.00%
Q5CIZ1              	35.29%		
Bootstrap support for Q5CJ45 as seed ortholog is 100%.
Bootstrap support for D3B3T9 as seed ortholog is 99%.

Group of orthologs #209. Best score 300 bits
Score difference with first non-orthologous sequence - C.hominis:55 P.pallidum:90

Q5CHH4              	100.00%		D3BBN0              	100.00%
Bootstrap support for Q5CHH4 as seed ortholog is 88%.
Bootstrap support for D3BBN0 as seed ortholog is 98%.

Group of orthologs #210. Best score 299 bits
Score difference with first non-orthologous sequence - C.hominis:299 P.pallidum:141

Q5CHS1              	100.00%		D3BCL5              	100.00%
Bootstrap support for Q5CHS1 as seed ortholog is 100%.
Bootstrap support for D3BCL5 as seed ortholog is 99%.

Group of orthologs #211. Best score 298 bits
Score difference with first non-orthologous sequence - C.hominis:192 P.pallidum:236

Q5CP98              	100.00%		D3B5L4              	100.00%
Bootstrap support for Q5CP98 as seed ortholog is 99%.
Bootstrap support for D3B5L4 as seed ortholog is 100%.

Group of orthologs #212. Best score 297 bits
Score difference with first non-orthologous sequence - C.hominis:297 P.pallidum:297

Q5CEV5              	100.00%		D3B2J9              	100.00%
Bootstrap support for Q5CEV5 as seed ortholog is 100%.
Bootstrap support for D3B2J9 as seed ortholog is 100%.

Group of orthologs #213. Best score 296 bits
Score difference with first non-orthologous sequence - C.hominis:296 P.pallidum:296

Q5CN52              	100.00%		D3B6K6              	100.00%
Bootstrap support for Q5CN52 as seed ortholog is 100%.
Bootstrap support for D3B6K6 as seed ortholog is 100%.

Group of orthologs #214. Best score 296 bits
Score difference with first non-orthologous sequence - C.hominis:296 P.pallidum:136

Q5CN17              	100.00%		D3B770              	100.00%
Bootstrap support for Q5CN17 as seed ortholog is 100%.
Bootstrap support for D3B770 as seed ortholog is 100%.

Group of orthologs #215. Best score 295 bits
Score difference with first non-orthologous sequence - C.hominis:228 P.pallidum:181

Q5CMG4              	100.00%		D3AVR8              	100.00%
Bootstrap support for Q5CMG4 as seed ortholog is 100%.
Bootstrap support for D3AVR8 as seed ortholog is 100%.

Group of orthologs #216. Best score 295 bits
Score difference with first non-orthologous sequence - C.hominis:295 P.pallidum:295

Q5CH15              	100.00%		D3BER0              	100.00%
Bootstrap support for Q5CH15 as seed ortholog is 100%.
Bootstrap support for D3BER0 as seed ortholog is 100%.

Group of orthologs #217. Best score 294 bits
Score difference with first non-orthologous sequence - C.hominis:206 P.pallidum:120

Q5CL05              	100.00%		D3AVX5              	100.00%
Bootstrap support for Q5CL05 as seed ortholog is 100%.
Bootstrap support for D3AVX5 as seed ortholog is 99%.

Group of orthologs #218. Best score 292 bits
Score difference with first non-orthologous sequence - C.hominis:292 P.pallidum:292

Q5CIY8              	100.00%		D3B3B2              	100.00%
Bootstrap support for Q5CIY8 as seed ortholog is 100%.
Bootstrap support for D3B3B2 as seed ortholog is 100%.

Group of orthologs #219. Best score 291 bits
Score difference with first non-orthologous sequence - C.hominis:291 P.pallidum:291

Q5CFN6              	100.00%		D3BLP0              	100.00%
Bootstrap support for Q5CFN6 as seed ortholog is 100%.
Bootstrap support for D3BLP0 as seed ortholog is 100%.

Group of orthologs #220. Best score 290 bits
Score difference with first non-orthologous sequence - C.hominis:225 P.pallidum:290

Q5CJR7              	100.00%		D3BN56              	100.00%
Bootstrap support for Q5CJR7 as seed ortholog is 100%.
Bootstrap support for D3BN56 as seed ortholog is 100%.

Group of orthologs #221. Best score 288 bits
Score difference with first non-orthologous sequence - C.hominis:288 P.pallidum:288

Q5CLT3              	100.00%		D3BIF4              	100.00%
Bootstrap support for Q5CLT3 as seed ortholog is 100%.
Bootstrap support for D3BIF4 as seed ortholog is 100%.

Group of orthologs #222. Best score 287 bits
Score difference with first non-orthologous sequence - C.hominis:287 P.pallidum:232

Q5CDR0              	100.00%		D3BBG6              	100.00%
Bootstrap support for Q5CDR0 as seed ortholog is 100%.
Bootstrap support for D3BBG6 as seed ortholog is 100%.

Group of orthologs #223. Best score 286 bits
Score difference with first non-orthologous sequence - C.hominis:286 P.pallidum:286

Q5CP03              	100.00%		D3BMD5              	100.00%
Bootstrap support for Q5CP03 as seed ortholog is 100%.
Bootstrap support for D3BMD5 as seed ortholog is 100%.

Group of orthologs #224. Best score 285 bits
Score difference with first non-orthologous sequence - C.hominis:285 P.pallidum:285

Q5CP73              	100.00%		D3BKY4              	100.00%
Bootstrap support for Q5CP73 as seed ortholog is 100%.
Bootstrap support for D3BKY4 as seed ortholog is 100%.

Group of orthologs #225. Best score 284 bits
Score difference with first non-orthologous sequence - C.hominis:284 P.pallidum:234

Q5CN24              	100.00%		D3AZB0              	100.00%
Bootstrap support for Q5CN24 as seed ortholog is 100%.
Bootstrap support for D3AZB0 as seed ortholog is 100%.

Group of orthologs #226. Best score 284 bits
Score difference with first non-orthologous sequence - C.hominis:284 P.pallidum:284

Q5CM21              	100.00%		D3B8D7              	100.00%
Bootstrap support for Q5CM21 as seed ortholog is 100%.
Bootstrap support for D3B8D7 as seed ortholog is 100%.

Group of orthologs #227. Best score 284 bits
Score difference with first non-orthologous sequence - C.hominis:284 P.pallidum:153

Q5CHG0              	100.00%		D3BHC9              	100.00%
Bootstrap support for Q5CHG0 as seed ortholog is 100%.
Bootstrap support for D3BHC9 as seed ortholog is 100%.

Group of orthologs #228. Best score 283 bits
Score difference with first non-orthologous sequence - C.hominis:203 P.pallidum:177

Q5CNF7              	100.00%		D3B7P1              	100.00%
                    	       		D3BSF4              	7.01%
Bootstrap support for Q5CNF7 as seed ortholog is 100%.
Bootstrap support for D3B7P1 as seed ortholog is 100%.

Group of orthologs #229. Best score 283 bits
Score difference with first non-orthologous sequence - C.hominis:107 P.pallidum:166

Q5CDM8              	100.00%		D3B471              	100.00%
Bootstrap support for Q5CDM8 as seed ortholog is 99%.
Bootstrap support for D3B471 as seed ortholog is 100%.

Group of orthologs #230. Best score 283 bits
Score difference with first non-orthologous sequence - C.hominis:283 P.pallidum:157

Q5CEI7              	100.00%		D3BSE8              	100.00%
Bootstrap support for Q5CEI7 as seed ortholog is 100%.
Bootstrap support for D3BSE8 as seed ortholog is 100%.

Group of orthologs #231. Best score 282 bits
Score difference with first non-orthologous sequence - C.hominis:282 P.pallidum:282

Q5CJ52              	100.00%		D3BBU3              	100.00%
Bootstrap support for Q5CJ52 as seed ortholog is 100%.
Bootstrap support for D3BBU3 as seed ortholog is 100%.

Group of orthologs #232. Best score 281 bits
Score difference with first non-orthologous sequence - C.hominis:281 P.pallidum:281

Q5CFA7              	100.00%		D3B2F1              	100.00%
Bootstrap support for Q5CFA7 as seed ortholog is 100%.
Bootstrap support for D3B2F1 as seed ortholog is 100%.

Group of orthologs #233. Best score 280 bits
Score difference with first non-orthologous sequence - C.hominis:150 P.pallidum:17

Q5CLD3              	100.00%		D3BP55              	100.00%
                    	       		D3BLV3              	8.87%
Bootstrap support for Q5CLD3 as seed ortholog is 100%.
Bootstrap support for D3BP55 as seed ortholog is 75%.

Group of orthologs #234. Best score 280 bits
Score difference with first non-orthologous sequence - C.hominis:44 P.pallidum:280

Q5CLV9              	100.00%		D3AVU8              	100.00%
Bootstrap support for Q5CLV9 as seed ortholog is 83%.
Bootstrap support for D3AVU8 as seed ortholog is 100%.

Group of orthologs #235. Best score 279 bits
Score difference with first non-orthologous sequence - C.hominis:279 P.pallidum:22

Q5CII5              	100.00%		D3B158              	100.00%
Bootstrap support for Q5CII5 as seed ortholog is 100%.
Bootstrap support for D3B158 as seed ortholog is 71%.
Alternative seed ortholog is D3BLC1 (22 bits away from this cluster)

Group of orthologs #236. Best score 278 bits
Score difference with first non-orthologous sequence - C.hominis:278 P.pallidum:201

Q5CI34              	100.00%		D3BEV0              	100.00%
Bootstrap support for Q5CI34 as seed ortholog is 100%.
Bootstrap support for D3BEV0 as seed ortholog is 100%.

Group of orthologs #237. Best score 277 bits
Score difference with first non-orthologous sequence - C.hominis:208 P.pallidum:173

Q5CDK7              	100.00%		D3B2T1              	100.00%
Bootstrap support for Q5CDK7 as seed ortholog is 100%.
Bootstrap support for D3B2T1 as seed ortholog is 100%.

Group of orthologs #238. Best score 277 bits
Score difference with first non-orthologous sequence - C.hominis:277 P.pallidum:277

Q5CMY2              	100.00%		D3BFF5              	100.00%
Bootstrap support for Q5CMY2 as seed ortholog is 100%.
Bootstrap support for D3BFF5 as seed ortholog is 100%.

Group of orthologs #239. Best score 276 bits
Score difference with first non-orthologous sequence - C.hominis:276 P.pallidum:276

Q5CKG4              	100.00%		D3AZ74              	100.00%
Bootstrap support for Q5CKG4 as seed ortholog is 100%.
Bootstrap support for D3AZ74 as seed ortholog is 100%.

Group of orthologs #240. Best score 276 bits
Score difference with first non-orthologous sequence - C.hominis:276 P.pallidum:276

Q5CLA7              	100.00%		D3BQ91              	100.00%
Bootstrap support for Q5CLA7 as seed ortholog is 100%.
Bootstrap support for D3BQ91 as seed ortholog is 100%.

Group of orthologs #241. Best score 275 bits
Score difference with first non-orthologous sequence - C.hominis:275 P.pallidum:275

Q5CL53              	100.00%		D3BQ08              	100.00%
Bootstrap support for Q5CL53 as seed ortholog is 100%.
Bootstrap support for D3BQ08 as seed ortholog is 100%.

Group of orthologs #242. Best score 274 bits
Score difference with first non-orthologous sequence - C.hominis:274 P.pallidum:172

Q5CJZ0              	100.00%		D3BNN4              	100.00%
Bootstrap support for Q5CJZ0 as seed ortholog is 100%.
Bootstrap support for D3BNN4 as seed ortholog is 99%.

Group of orthologs #243. Best score 272 bits
Score difference with first non-orthologous sequence - C.hominis:272 P.pallidum:272

Q5CHD4              	100.00%		D3BV94              	100.00%
                    	       		D3BVB3              	42.05%
                    	       		D3BVB6              	34.11%
Bootstrap support for Q5CHD4 as seed ortholog is 100%.
Bootstrap support for D3BV94 as seed ortholog is 100%.

Group of orthologs #244. Best score 272 bits
Score difference with first non-orthologous sequence - C.hominis:272 P.pallidum:272

Q5CIB1              	100.00%		D3BD10              	100.00%
Bootstrap support for Q5CIB1 as seed ortholog is 100%.
Bootstrap support for D3BD10 as seed ortholog is 100%.

Group of orthologs #245. Best score 270 bits
Score difference with first non-orthologous sequence - C.hominis:270 P.pallidum:270

Q5CHH2              	100.00%		D3BEF1              	100.00%
Bootstrap support for Q5CHH2 as seed ortholog is 100%.
Bootstrap support for D3BEF1 as seed ortholog is 100%.

Group of orthologs #246. Best score 269 bits
Score difference with first non-orthologous sequence - C.hominis:170 P.pallidum:187

Q5CMF1              	100.00%		D3AWZ0              	100.00%
Bootstrap support for Q5CMF1 as seed ortholog is 99%.
Bootstrap support for D3AWZ0 as seed ortholog is 100%.

Group of orthologs #247. Best score 269 bits
Score difference with first non-orthologous sequence - C.hominis:269 P.pallidum:269

Q5CK52              	100.00%		D3BQG1              	100.00%
Bootstrap support for Q5CK52 as seed ortholog is 100%.
Bootstrap support for D3BQG1 as seed ortholog is 100%.

Group of orthologs #248. Best score 267 bits
Score difference with first non-orthologous sequence - C.hominis:121 P.pallidum:18

Q5CNI8              	100.00%		D3BES1              	100.00%
Q5CNI9              	9.28%		D3BGX1              	74.55%
Bootstrap support for Q5CNI8 as seed ortholog is 99%.
Bootstrap support for D3BES1 as seed ortholog is 63%.
Alternative seed ortholog is D3BSL5 (18 bits away from this cluster)

Group of orthologs #249. Best score 266 bits
Score difference with first non-orthologous sequence - C.hominis:144 P.pallidum:89

Q5CJT0              	100.00%		D3B3A5              	100.00%
Bootstrap support for Q5CJT0 as seed ortholog is 99%.
Bootstrap support for D3B3A5 as seed ortholog is 97%.

Group of orthologs #250. Best score 266 bits
Score difference with first non-orthologous sequence - C.hominis:266 P.pallidum:266

Q5CJX7              	100.00%		D3BQI1              	100.00%
Bootstrap support for Q5CJX7 as seed ortholog is 100%.
Bootstrap support for D3BQI1 as seed ortholog is 100%.

Group of orthologs #251. Best score 265 bits
Score difference with first non-orthologous sequence - C.hominis:175 P.pallidum:265

Q5CM02              	100.00%		D3BCL1              	100.00%
Bootstrap support for Q5CM02 as seed ortholog is 99%.
Bootstrap support for D3BCL1 as seed ortholog is 100%.

Group of orthologs #252. Best score 265 bits
Score difference with first non-orthologous sequence - C.hominis:220 P.pallidum:142

Q5CL26              	100.00%		D3BM08              	100.00%
Bootstrap support for Q5CL26 as seed ortholog is 100%.
Bootstrap support for D3BM08 as seed ortholog is 100%.

Group of orthologs #253. Best score 264 bits
Score difference with first non-orthologous sequence - C.hominis:264 P.pallidum:264

Q5CKS1              	100.00%		D3BK06              	100.00%
Bootstrap support for Q5CKS1 as seed ortholog is 100%.
Bootstrap support for D3BK06 as seed ortholog is 100%.

Group of orthologs #254. Best score 264 bits
Score difference with first non-orthologous sequence - C.hominis:264 P.pallidum:165

Q5CJF2              	100.00%		D3BQZ8              	100.00%
Bootstrap support for Q5CJF2 as seed ortholog is 100%.
Bootstrap support for D3BQZ8 as seed ortholog is 100%.

Group of orthologs #255. Best score 263 bits
Score difference with first non-orthologous sequence - C.hominis:263 P.pallidum:188

Q5CHE6              	100.00%		D3B3I4              	100.00%
                    	       		D3BT00              	7.36%
                    	       		D3AZU4              	6.66%
                    	       		D3BK85              	6.49%
                    	       		D3AZN8              	5.41%
Bootstrap support for Q5CHE6 as seed ortholog is 100%.
Bootstrap support for D3B3I4 as seed ortholog is 100%.

Group of orthologs #256. Best score 263 bits
Score difference with first non-orthologous sequence - C.hominis:135 P.pallidum:112

Q5CLR8              	100.00%		D3BBP5              	100.00%
Bootstrap support for Q5CLR8 as seed ortholog is 100%.
Bootstrap support for D3BBP5 as seed ortholog is 100%.

Group of orthologs #257. Best score 261 bits
Score difference with first non-orthologous sequence - C.hominis:116 P.pallidum:121

Q5CK88              	100.00%		D3B839              	100.00%
Bootstrap support for Q5CK88 as seed ortholog is 99%.
Bootstrap support for D3B839 as seed ortholog is 99%.

Group of orthologs #258. Best score 260 bits
Score difference with first non-orthologous sequence - C.hominis:260 P.pallidum:260

Q5CMZ4              	100.00%		D3AX76              	100.00%
Bootstrap support for Q5CMZ4 as seed ortholog is 100%.
Bootstrap support for D3AX76 as seed ortholog is 100%.

Group of orthologs #259. Best score 259 bits
Score difference with first non-orthologous sequence - C.hominis:259 P.pallidum:135

Q5CMG0              	100.00%		D3BTG9              	100.00%
Bootstrap support for Q5CMG0 as seed ortholog is 100%.
Bootstrap support for D3BTG9 as seed ortholog is 99%.

Group of orthologs #260. Best score 258 bits
Score difference with first non-orthologous sequence - C.hominis:258 P.pallidum:258

Q5CFI5              	100.00%		D3B6G8              	100.00%
Bootstrap support for Q5CFI5 as seed ortholog is 100%.
Bootstrap support for D3B6G8 as seed ortholog is 100%.

Group of orthologs #261. Best score 258 bits
Score difference with first non-orthologous sequence - C.hominis:258 P.pallidum:103

Q5CK49              	100.00%		D3BPC8              	100.00%
Bootstrap support for Q5CK49 as seed ortholog is 100%.
Bootstrap support for D3BPC8 as seed ortholog is 98%.

Group of orthologs #262. Best score 257 bits
Score difference with first non-orthologous sequence - C.hominis:257 P.pallidum:257

Q5CGJ5              	100.00%		D3B606              	100.00%
Bootstrap support for Q5CGJ5 as seed ortholog is 100%.
Bootstrap support for D3B606 as seed ortholog is 100%.

Group of orthologs #263. Best score 254 bits
Score difference with first non-orthologous sequence - C.hominis:254 P.pallidum:128

Q5CNV3              	100.00%		D3B9T8              	100.00%
Bootstrap support for Q5CNV3 as seed ortholog is 100%.
Bootstrap support for D3B9T8 as seed ortholog is 99%.

Group of orthologs #264. Best score 253 bits
Score difference with first non-orthologous sequence - C.hominis:195 P.pallidum:253

Q5CMD4              	100.00%		D3BAC7              	100.00%
Bootstrap support for Q5CMD4 as seed ortholog is 100%.
Bootstrap support for D3BAC7 as seed ortholog is 100%.

Group of orthologs #265. Best score 252 bits
Score difference with first non-orthologous sequence - C.hominis:252 P.pallidum:252

Q5CIB9              	100.00%		D3AXH6              	100.00%
Bootstrap support for Q5CIB9 as seed ortholog is 100%.
Bootstrap support for D3AXH6 as seed ortholog is 100%.

Group of orthologs #266. Best score 252 bits
Score difference with first non-orthologous sequence - C.hominis:78 P.pallidum:136

Q5CMW0              	100.00%		D3B9E0              	100.00%
Bootstrap support for Q5CMW0 as seed ortholog is 96%.
Bootstrap support for D3B9E0 as seed ortholog is 99%.

Group of orthologs #267. Best score 250 bits
Score difference with first non-orthologous sequence - C.hominis:162 P.pallidum:183

Q5CEW7              	100.00%		D3B6G7              	100.00%
Bootstrap support for Q5CEW7 as seed ortholog is 100%.
Bootstrap support for D3B6G7 as seed ortholog is 100%.

Group of orthologs #268. Best score 249 bits
Score difference with first non-orthologous sequence - C.hominis:249 P.pallidum:249

Q5CKN1              	100.00%		D3BBF0              	100.00%
Bootstrap support for Q5CKN1 as seed ortholog is 100%.
Bootstrap support for D3BBF0 as seed ortholog is 100%.

Group of orthologs #269. Best score 248 bits
Score difference with first non-orthologous sequence - C.hominis:248 P.pallidum:248

Q5CNB1              	100.00%		D3B3M9              	100.00%
Bootstrap support for Q5CNB1 as seed ortholog is 100%.
Bootstrap support for D3B3M9 as seed ortholog is 100%.

Group of orthologs #270. Best score 247 bits
Score difference with first non-orthologous sequence - C.hominis:247 P.pallidum:247

Q5CJN9              	100.00%		D3B512              	100.00%
Bootstrap support for Q5CJN9 as seed ortholog is 100%.
Bootstrap support for D3B512 as seed ortholog is 100%.

Group of orthologs #271. Best score 245 bits
Score difference with first non-orthologous sequence - C.hominis:245 P.pallidum:245

Q5CKQ4              	100.00%		D3B6L9              	100.00%
Bootstrap support for Q5CKQ4 as seed ortholog is 100%.
Bootstrap support for D3B6L9 as seed ortholog is 100%.

Group of orthologs #272. Best score 245 bits
Score difference with first non-orthologous sequence - C.hominis:245 P.pallidum:245

Q5CLV1              	100.00%		D3BMV7              	100.00%
Bootstrap support for Q5CLV1 as seed ortholog is 100%.
Bootstrap support for D3BMV7 as seed ortholog is 100%.

Group of orthologs #273. Best score 244 bits
Score difference with first non-orthologous sequence - C.hominis:244 P.pallidum:244

Q5CMA3              	100.00%		D3AWJ7              	100.00%
Bootstrap support for Q5CMA3 as seed ortholog is 100%.
Bootstrap support for D3AWJ7 as seed ortholog is 100%.

Group of orthologs #274. Best score 244 bits
Score difference with first non-orthologous sequence - C.hominis:39 P.pallidum:23

Q5CLE8              	100.00%		D3BQE6              	100.00%
Bootstrap support for Q5CLE8 as seed ortholog is 98%.
Bootstrap support for D3BQE6 as seed ortholog is 84%.

Group of orthologs #275. Best score 244 bits
Score difference with first non-orthologous sequence - C.hominis:178 P.pallidum:91

Q5CMQ9              	100.00%		D3BTY6              	100.00%
Bootstrap support for Q5CMQ9 as seed ortholog is 100%.
Bootstrap support for D3BTY6 as seed ortholog is 99%.

Group of orthologs #276. Best score 244 bits
Score difference with first non-orthologous sequence - C.hominis:244 P.pallidum:244

Q5CLH9              	100.00%		D3BVF2              	100.00%
Bootstrap support for Q5CLH9 as seed ortholog is 100%.
Bootstrap support for D3BVF2 as seed ortholog is 100%.

Group of orthologs #277. Best score 243 bits
Score difference with first non-orthologous sequence - C.hominis:243 P.pallidum:47

Q5CM60              	100.00%		D3B210              	100.00%
Bootstrap support for Q5CM60 as seed ortholog is 100%.
Bootstrap support for D3B210 as seed ortholog is 86%.

Group of orthologs #278. Best score 243 bits
Score difference with first non-orthologous sequence - C.hominis:93 P.pallidum:59

Q5CL10              	100.00%		D3B9K7              	100.00%
Bootstrap support for Q5CL10 as seed ortholog is 93%.
Bootstrap support for D3B9K7 as seed ortholog is 95%.

Group of orthologs #279. Best score 243 bits
Score difference with first non-orthologous sequence - C.hominis:129 P.pallidum:105

Q5CL68              	100.00%		D3BUT4              	100.00%
Bootstrap support for Q5CL68 as seed ortholog is 99%.
Bootstrap support for D3BUT4 as seed ortholog is 99%.

Group of orthologs #280. Best score 242 bits
Score difference with first non-orthologous sequence - C.hominis:242 P.pallidum:188

Q5CH26              	100.00%		D3B280              	100.00%
                    	       		D3BV53              	10.51%
Bootstrap support for Q5CH26 as seed ortholog is 100%.
Bootstrap support for D3B280 as seed ortholog is 100%.

Group of orthologs #281. Best score 242 bits
Score difference with first non-orthologous sequence - C.hominis:124 P.pallidum:88

Q5CM15              	100.00%		D3BQN8              	100.00%
Bootstrap support for Q5CM15 as seed ortholog is 98%.
Bootstrap support for D3BQN8 as seed ortholog is 78%.

Group of orthologs #282. Best score 240 bits
Score difference with first non-orthologous sequence - C.hominis:240 P.pallidum:240

Q5CEQ2              	100.00%		D3AVG7              	100.00%
Bootstrap support for Q5CEQ2 as seed ortholog is 100%.
Bootstrap support for D3AVG7 as seed ortholog is 100%.

Group of orthologs #283. Best score 240 bits
Score difference with first non-orthologous sequence - C.hominis:240 P.pallidum:240

Q5CNY8              	100.00%		D3B8K8              	100.00%
Bootstrap support for Q5CNY8 as seed ortholog is 100%.
Bootstrap support for D3B8K8 as seed ortholog is 100%.

Group of orthologs #284. Best score 240 bits
Score difference with first non-orthologous sequence - C.hominis:240 P.pallidum:240

Q5CLV2              	100.00%		D3BJC8              	100.00%
Bootstrap support for Q5CLV2 as seed ortholog is 100%.
Bootstrap support for D3BJC8 as seed ortholog is 100%.

Group of orthologs #285. Best score 240 bits
Score difference with first non-orthologous sequence - C.hominis:240 P.pallidum:240

Q5CK89              	100.00%		D3BPW9              	100.00%
Bootstrap support for Q5CK89 as seed ortholog is 100%.
Bootstrap support for D3BPW9 as seed ortholog is 100%.

Group of orthologs #286. Best score 239 bits
Score difference with first non-orthologous sequence - C.hominis:239 P.pallidum:239

Q5CMN4              	100.00%		D3BB01              	100.00%
Bootstrap support for Q5CMN4 as seed ortholog is 100%.
Bootstrap support for D3BB01 as seed ortholog is 100%.

Group of orthologs #287. Best score 238 bits
Score difference with first non-orthologous sequence - C.hominis:238 P.pallidum:238

Q5CEL7              	100.00%		D3B3V5              	100.00%
Bootstrap support for Q5CEL7 as seed ortholog is 100%.
Bootstrap support for D3B3V5 as seed ortholog is 100%.

Group of orthologs #288. Best score 237 bits
Score difference with first non-orthologous sequence - C.hominis:98 P.pallidum:62

Q5CEQ8              	100.00%		D3B5B2              	100.00%
Bootstrap support for Q5CEQ8 as seed ortholog is 99%.
Bootstrap support for D3B5B2 as seed ortholog is 99%.

Group of orthologs #289. Best score 237 bits
Score difference with first non-orthologous sequence - C.hominis:237 P.pallidum:237

Q5CKW7              	100.00%		D3B4I5              	100.00%
Bootstrap support for Q5CKW7 as seed ortholog is 100%.
Bootstrap support for D3B4I5 as seed ortholog is 100%.

Group of orthologs #290. Best score 237 bits
Score difference with first non-orthologous sequence - C.hominis:237 P.pallidum:180

Q5CKA6              	100.00%		D3B9R2              	100.00%
Bootstrap support for Q5CKA6 as seed ortholog is 100%.
Bootstrap support for D3B9R2 as seed ortholog is 99%.

Group of orthologs #291. Best score 237 bits
Score difference with first non-orthologous sequence - C.hominis:237 P.pallidum:237

Q5CPC9              	100.00%		D3BRK4              	100.00%
Bootstrap support for Q5CPC9 as seed ortholog is 100%.
Bootstrap support for D3BRK4 as seed ortholog is 100%.

Group of orthologs #292. Best score 235 bits
Score difference with first non-orthologous sequence - C.hominis:235 P.pallidum:235

Q5CIC0              	100.00%		D3AZF5              	100.00%
Bootstrap support for Q5CIC0 as seed ortholog is 100%.
Bootstrap support for D3AZF5 as seed ortholog is 100%.

Group of orthologs #293. Best score 235 bits
Score difference with first non-orthologous sequence - C.hominis:235 P.pallidum:164

Q5CJ42              	100.00%		D3B8K6              	100.00%
Bootstrap support for Q5CJ42 as seed ortholog is 100%.
Bootstrap support for D3B8K6 as seed ortholog is 100%.

Group of orthologs #294. Best score 234 bits
Score difference with first non-orthologous sequence - C.hominis:234 P.pallidum:234

Q5CMB3              	100.00%		D3BUZ2              	100.00%
Bootstrap support for Q5CMB3 as seed ortholog is 100%.
Bootstrap support for D3BUZ2 as seed ortholog is 100%.

Group of orthologs #295. Best score 233 bits
Score difference with first non-orthologous sequence - C.hominis:233 P.pallidum:233

Q5CHE4              	100.00%		D3AXJ0              	100.00%
Bootstrap support for Q5CHE4 as seed ortholog is 100%.
Bootstrap support for D3AXJ0 as seed ortholog is 100%.

Group of orthologs #296. Best score 233 bits
Score difference with first non-orthologous sequence - C.hominis:4 P.pallidum:1

Q5CJ33              	100.00%		D3BAL5              	100.00%
Bootstrap support for Q5CJ33 as seed ortholog is 48%.
Alternative seed ortholog is Q5CGN2 (4 bits away from this cluster)
Bootstrap support for D3BAL5 as seed ortholog is 63%.
Alternative seed ortholog is D3AZ82 (1 bits away from this cluster)

Group of orthologs #297. Best score 233 bits
Score difference with first non-orthologous sequence - C.hominis:233 P.pallidum:99

Q5CNE6              	100.00%		D3BQ35              	100.00%
Bootstrap support for Q5CNE6 as seed ortholog is 100%.
Bootstrap support for D3BQ35 as seed ortholog is 98%.

Group of orthologs #298. Best score 231 bits
Score difference with first non-orthologous sequence - C.hominis:231 P.pallidum:231

Q5CFC7              	100.00%		D3AYQ3              	100.00%
Bootstrap support for Q5CFC7 as seed ortholog is 100%.
Bootstrap support for D3AYQ3 as seed ortholog is 100%.

Group of orthologs #299. Best score 231 bits
Score difference with first non-orthologous sequence - C.hominis:231 P.pallidum:104

Q5CEU0              	100.00%		D3BAF6              	100.00%
Bootstrap support for Q5CEU0 as seed ortholog is 100%.
Bootstrap support for D3BAF6 as seed ortholog is 99%.

Group of orthologs #300. Best score 230 bits
Score difference with first non-orthologous sequence - C.hominis:230 P.pallidum:230

Q5CFG4              	100.00%		D3BBS3              	100.00%
Bootstrap support for Q5CFG4 as seed ortholog is 100%.
Bootstrap support for D3BBS3 as seed ortholog is 100%.

Group of orthologs #301. Best score 230 bits
Score difference with first non-orthologous sequence - C.hominis:230 P.pallidum:164

Q5CNZ1              	100.00%		D3BM07              	100.00%
Bootstrap support for Q5CNZ1 as seed ortholog is 100%.
Bootstrap support for D3BM07 as seed ortholog is 99%.

Group of orthologs #302. Best score 230 bits
Score difference with first non-orthologous sequence - C.hominis:230 P.pallidum:10

Q5CNM2              	100.00%		D3BR78              	100.00%
Bootstrap support for Q5CNM2 as seed ortholog is 100%.
Bootstrap support for D3BR78 as seed ortholog is 62%.
Alternative seed ortholog is D3B1I2 (10 bits away from this cluster)

Group of orthologs #303. Best score 230 bits
Score difference with first non-orthologous sequence - C.hominis:230 P.pallidum:230

Q5CLC3              	100.00%		D3BTV2              	100.00%
Bootstrap support for Q5CLC3 as seed ortholog is 100%.
Bootstrap support for D3BTV2 as seed ortholog is 100%.

Group of orthologs #304. Best score 229 bits
Score difference with first non-orthologous sequence - C.hominis:229 P.pallidum:229

Q5CME4              	100.00%		D3BIZ7              	100.00%
Bootstrap support for Q5CME4 as seed ortholog is 100%.
Bootstrap support for D3BIZ7 as seed ortholog is 100%.

Group of orthologs #305. Best score 228 bits
Score difference with first non-orthologous sequence - C.hominis:228 P.pallidum:228

Q5CMF9              	100.00%		D3B782              	100.00%
                    	       		D3AX99              	58.06%
Bootstrap support for Q5CMF9 as seed ortholog is 100%.
Bootstrap support for D3B782 as seed ortholog is 100%.

Group of orthologs #306. Best score 228 bits
Score difference with first non-orthologous sequence - C.hominis:228 P.pallidum:158

Q5CKT0              	100.00%		D3AWT2              	100.00%
Bootstrap support for Q5CKT0 as seed ortholog is 100%.
Bootstrap support for D3AWT2 as seed ortholog is 100%.

Group of orthologs #307. Best score 228 bits
Score difference with first non-orthologous sequence - C.hominis:228 P.pallidum:228

Q5CN14              	100.00%		D3B1F9              	100.00%
Bootstrap support for Q5CN14 as seed ortholog is 100%.
Bootstrap support for D3B1F9 as seed ortholog is 100%.

Group of orthologs #308. Best score 227 bits
Score difference with first non-orthologous sequence - C.hominis:227 P.pallidum:227

Q5CJZ9              	100.00%		D3B3A4              	100.00%
Bootstrap support for Q5CJZ9 as seed ortholog is 100%.
Bootstrap support for D3B3A4 as seed ortholog is 100%.

Group of orthologs #309. Best score 225 bits
Score difference with first non-orthologous sequence - C.hominis:225 P.pallidum:109

Q5CKP3              	100.00%		D3B2Q1              	100.00%
Bootstrap support for Q5CKP3 as seed ortholog is 100%.
Bootstrap support for D3B2Q1 as seed ortholog is 99%.

Group of orthologs #310. Best score 224 bits
Score difference with first non-orthologous sequence - C.hominis:224 P.pallidum:224

Q5CMQ7              	100.00%		D3BK61              	100.00%
Bootstrap support for Q5CMQ7 as seed ortholog is 100%.
Bootstrap support for D3BK61 as seed ortholog is 100%.

Group of orthologs #311. Best score 222 bits
Score difference with first non-orthologous sequence - C.hominis:222 P.pallidum:104

Q5CHY2              	100.00%		D3BA00              	100.00%
                    	       		D3BUY8              	10.10%
Bootstrap support for Q5CHY2 as seed ortholog is 100%.
Bootstrap support for D3BA00 as seed ortholog is 99%.

Group of orthologs #312. Best score 222 bits
Score difference with first non-orthologous sequence - C.hominis:114 P.pallidum:222

Q5CKZ0              	100.00%		D3B0N9              	100.00%
Bootstrap support for Q5CKZ0 as seed ortholog is 99%.
Bootstrap support for D3B0N9 as seed ortholog is 100%.

Group of orthologs #313. Best score 222 bits
Score difference with first non-orthologous sequence - C.hominis:222 P.pallidum:126

Q5CKN4              	100.00%		D3BHB9              	100.00%
Bootstrap support for Q5CKN4 as seed ortholog is 100%.
Bootstrap support for D3BHB9 as seed ortholog is 100%.

Group of orthologs #314. Best score 222 bits
Score difference with first non-orthologous sequence - C.hominis:222 P.pallidum:222

Q5CP76              	100.00%		D3BEH6              	100.00%
Bootstrap support for Q5CP76 as seed ortholog is 100%.
Bootstrap support for D3BEH6 as seed ortholog is 100%.

Group of orthologs #315. Best score 221 bits
Score difference with first non-orthologous sequence - C.hominis:221 P.pallidum:152

Q5CH03              	100.00%		D3BCJ1              	100.00%
Bootstrap support for Q5CH03 as seed ortholog is 100%.
Bootstrap support for D3BCJ1 as seed ortholog is 99%.

Group of orthologs #316. Best score 220 bits
Score difference with first non-orthologous sequence - C.hominis:58 P.pallidum:49

Q5CJK3              	100.00%		D3BKT2              	100.00%
Q5CNS4              	13.45%		D3BGZ5              	15.05%
Q5CHL8              	8.97%		
Bootstrap support for Q5CJK3 as seed ortholog is 96%.
Bootstrap support for D3BKT2 as seed ortholog is 92%.

Group of orthologs #317. Best score 220 bits
Score difference with first non-orthologous sequence - C.hominis:220 P.pallidum:220

Q5CMB6              	100.00%		D3BR11              	100.00%
                    	       		D3BHF8              	9.30%
                    	       		D3B0M3              	6.38%
                    	       		D3BRS8              	6.25%
Bootstrap support for Q5CMB6 as seed ortholog is 100%.
Bootstrap support for D3BR11 as seed ortholog is 100%.

Group of orthologs #318. Best score 220 bits
Score difference with first non-orthologous sequence - C.hominis:220 P.pallidum:220

Q5CDV7              	100.00%		D3BJY4              	100.00%
Bootstrap support for Q5CDV7 as seed ortholog is 100%.
Bootstrap support for D3BJY4 as seed ortholog is 100%.

Group of orthologs #319. Best score 218 bits
Score difference with first non-orthologous sequence - C.hominis:218 P.pallidum:218

Q5CP48              	100.00%		D3BBV3              	100.00%
Bootstrap support for Q5CP48 as seed ortholog is 100%.
Bootstrap support for D3BBV3 as seed ortholog is 100%.

Group of orthologs #320. Best score 217 bits
Score difference with first non-orthologous sequence - C.hominis:217 P.pallidum:156

Q5CP75              	100.00%		D3BHJ6              	100.00%
                    	       		D3B6I7              	17.09%
                    	       		D3BL03              	12.12%
                    	       		D3B2W9              	11.64%
                    	       		D3B027              	6.26%
Bootstrap support for Q5CP75 as seed ortholog is 100%.
Bootstrap support for D3BHJ6 as seed ortholog is 99%.

Group of orthologs #321. Best score 217 bits
Score difference with first non-orthologous sequence - C.hominis:217 P.pallidum:217

Q5CGN0              	100.00%		D3AX31              	100.00%
Bootstrap support for Q5CGN0 as seed ortholog is 100%.
Bootstrap support for D3AX31 as seed ortholog is 100%.

Group of orthologs #322. Best score 217 bits
Score difference with first non-orthologous sequence - C.hominis:217 P.pallidum:217

Q5CKB4              	100.00%		D3B3A9              	100.00%
Bootstrap support for Q5CKB4 as seed ortholog is 100%.
Bootstrap support for D3B3A9 as seed ortholog is 100%.

Group of orthologs #323. Best score 217 bits
Score difference with first non-orthologous sequence - C.hominis:217 P.pallidum:75

Q5CNK6              	100.00%		D3B130              	100.00%
Bootstrap support for Q5CNK6 as seed ortholog is 100%.
Bootstrap support for D3B130 as seed ortholog is 96%.

Group of orthologs #324. Best score 215 bits
Score difference with first non-orthologous sequence - C.hominis:215 P.pallidum:215

Q5CJF7              	100.00%		D3BEU0              	100.00%
Bootstrap support for Q5CJF7 as seed ortholog is 100%.
Bootstrap support for D3BEU0 as seed ortholog is 100%.

Group of orthologs #325. Best score 214 bits
Score difference with first non-orthologous sequence - C.hominis:214 P.pallidum:214

Q5CFB8              	100.00%		D3B1Q0              	100.00%
Bootstrap support for Q5CFB8 as seed ortholog is 100%.
Bootstrap support for D3B1Q0 as seed ortholog is 100%.

Group of orthologs #326. Best score 214 bits
Score difference with first non-orthologous sequence - C.hominis:214 P.pallidum:214

Q5CNK9              	100.00%		D3BLV1              	100.00%
Bootstrap support for Q5CNK9 as seed ortholog is 100%.
Bootstrap support for D3BLV1 as seed ortholog is 100%.

Group of orthologs #327. Best score 214 bits
Score difference with first non-orthologous sequence - C.hominis:214 P.pallidum:214

Q5CP72              	100.00%		D3BP67              	100.00%
Bootstrap support for Q5CP72 as seed ortholog is 100%.
Bootstrap support for D3BP67 as seed ortholog is 100%.

Group of orthologs #328. Best score 213 bits
Score difference with first non-orthologous sequence - C.hominis:103 P.pallidum:130

Q5CF41              	100.00%		D3AZ65              	100.00%
Bootstrap support for Q5CF41 as seed ortholog is 99%.
Bootstrap support for D3AZ65 as seed ortholog is 100%.

Group of orthologs #329. Best score 213 bits
Score difference with first non-orthologous sequence - C.hominis:213 P.pallidum:126

Q5CHZ5              	100.00%		D3B367              	100.00%
Bootstrap support for Q5CHZ5 as seed ortholog is 100%.
Bootstrap support for D3B367 as seed ortholog is 96%.

Group of orthologs #330. Best score 213 bits
Score difference with first non-orthologous sequence - C.hominis:213 P.pallidum:130

Q5CNR0              	100.00%		D3B0J9              	100.00%
Bootstrap support for Q5CNR0 as seed ortholog is 100%.
Bootstrap support for D3B0J9 as seed ortholog is 99%.

Group of orthologs #331. Best score 213 bits
Score difference with first non-orthologous sequence - C.hominis:213 P.pallidum:154

Q5CEV2              	100.00%		D3BBL0              	100.00%
Bootstrap support for Q5CEV2 as seed ortholog is 100%.
Bootstrap support for D3BBL0 as seed ortholog is 99%.

Group of orthologs #332. Best score 213 bits
Score difference with first non-orthologous sequence - C.hominis:213 P.pallidum:213

Q5CMS2              	100.00%		D3BSF9              	100.00%
Bootstrap support for Q5CMS2 as seed ortholog is 100%.
Bootstrap support for D3BSF9 as seed ortholog is 100%.

Group of orthologs #333. Best score 212 bits
Score difference with first non-orthologous sequence - C.hominis:212 P.pallidum:212

Q5CNS8              	100.00%		D3BKA7              	100.00%
                    	       		D3BQB9              	17.98%
                    	       		D3BIU0              	10.42%
Bootstrap support for Q5CNS8 as seed ortholog is 100%.
Bootstrap support for D3BKA7 as seed ortholog is 100%.

Group of orthologs #334. Best score 212 bits
Score difference with first non-orthologous sequence - C.hominis:212 P.pallidum:212

Q5CNV9              	100.00%		D3BS90              	100.00%
Bootstrap support for Q5CNV9 as seed ortholog is 100%.
Bootstrap support for D3BS90 as seed ortholog is 100%.

Group of orthologs #335. Best score 211 bits
Score difference with first non-orthologous sequence - C.hominis:211 P.pallidum:211

Q5CL42              	100.00%		D3AZM5              	100.00%
Bootstrap support for Q5CL42 as seed ortholog is 100%.
Bootstrap support for D3AZM5 as seed ortholog is 100%.

Group of orthologs #336. Best score 211 bits
Score difference with first non-orthologous sequence - C.hominis:211 P.pallidum:211

Q5CKY0              	100.00%		D3B1K3              	100.00%
Bootstrap support for Q5CKY0 as seed ortholog is 100%.
Bootstrap support for D3B1K3 as seed ortholog is 100%.

Group of orthologs #337. Best score 211 bits
Score difference with first non-orthologous sequence - C.hominis:211 P.pallidum:211

Q5CMA5              	100.00%		D3BEQ8              	100.00%
Bootstrap support for Q5CMA5 as seed ortholog is 100%.
Bootstrap support for D3BEQ8 as seed ortholog is 100%.

Group of orthologs #338. Best score 211 bits
Score difference with first non-orthologous sequence - C.hominis:211 P.pallidum:211

Q5CH14              	100.00%		D3BV19              	100.00%
Bootstrap support for Q5CH14 as seed ortholog is 100%.
Bootstrap support for D3BV19 as seed ortholog is 100%.

Group of orthologs #339. Best score 211 bits
Score difference with first non-orthologous sequence - C.hominis:45 P.pallidum:211

Q5CKK7              	100.00%		D3BSY5              	100.00%
Bootstrap support for Q5CKK7 as seed ortholog is 93%.
Bootstrap support for D3BSY5 as seed ortholog is 100%.

Group of orthologs #340. Best score 210 bits
Score difference with first non-orthologous sequence - C.hominis:210 P.pallidum:54

Q5CP86              	100.00%		D3B633              	100.00%
Q5CKZ1              	92.59%		D3B6K9              	47.17%
Bootstrap support for Q5CP86 as seed ortholog is 100%.
Bootstrap support for D3B633 as seed ortholog is 99%.

Group of orthologs #341. Best score 210 bits
Score difference with first non-orthologous sequence - C.hominis:210 P.pallidum:210

Q5CEM7              	100.00%		D3AYN6              	100.00%
Bootstrap support for Q5CEM7 as seed ortholog is 100%.
Bootstrap support for D3AYN6 as seed ortholog is 100%.

Group of orthologs #342. Best score 209 bits
Score difference with first non-orthologous sequence - C.hominis:60 P.pallidum:63

Q5CEF7              	100.00%		D3B1S9              	100.00%
Bootstrap support for Q5CEF7 as seed ortholog is 92%.
Bootstrap support for D3B1S9 as seed ortholog is 90%.

Group of orthologs #343. Best score 209 bits
Score difference with first non-orthologous sequence - C.hominis:209 P.pallidum:209

Q5CPB8              	100.00%		D3BEY6              	100.00%
Bootstrap support for Q5CPB8 as seed ortholog is 100%.
Bootstrap support for D3BEY6 as seed ortholog is 100%.

Group of orthologs #344. Best score 208 bits
Score difference with first non-orthologous sequence - C.hominis:208 P.pallidum:102

Q5CIV2              	100.00%		D3B6D9              	100.00%
Bootstrap support for Q5CIV2 as seed ortholog is 100%.
Bootstrap support for D3B6D9 as seed ortholog is 99%.

Group of orthologs #345. Best score 208 bits
Score difference with first non-orthologous sequence - C.hominis:208 P.pallidum:208

Q5CHP0              	100.00%		D3BLT0              	100.00%
Bootstrap support for Q5CHP0 as seed ortholog is 100%.
Bootstrap support for D3BLT0 as seed ortholog is 100%.

Group of orthologs #346. Best score 208 bits
Score difference with first non-orthologous sequence - C.hominis:208 P.pallidum:208

Q5CMB7              	100.00%		D3BNT3              	100.00%
Bootstrap support for Q5CMB7 as seed ortholog is 100%.
Bootstrap support for D3BNT3 as seed ortholog is 100%.

Group of orthologs #347. Best score 207 bits
Score difference with first non-orthologous sequence - C.hominis:207 P.pallidum:125

Q5CFH5              	100.00%		D3BEP4              	100.00%
Bootstrap support for Q5CFH5 as seed ortholog is 100%.
Bootstrap support for D3BEP4 as seed ortholog is 99%.

Group of orthologs #348. Best score 207 bits
Score difference with first non-orthologous sequence - C.hominis:207 P.pallidum:207

Q5CI27              	100.00%		D3BEA4              	100.00%
Bootstrap support for Q5CI27 as seed ortholog is 100%.
Bootstrap support for D3BEA4 as seed ortholog is 100%.

Group of orthologs #349. Best score 206 bits
Score difference with first non-orthologous sequence - C.hominis:206 P.pallidum:206

Q5CJ90              	100.00%		D3B6E5              	100.00%
Bootstrap support for Q5CJ90 as seed ortholog is 100%.
Bootstrap support for D3B6E5 as seed ortholog is 100%.

Group of orthologs #350. Best score 206 bits
Score difference with first non-orthologous sequence - C.hominis:81 P.pallidum:62

Q5CL58              	100.00%		D3BGI7              	100.00%
Bootstrap support for Q5CL58 as seed ortholog is 100%.
Bootstrap support for D3BGI7 as seed ortholog is 99%.

Group of orthologs #351. Best score 205 bits
Score difference with first non-orthologous sequence - C.hominis:50 P.pallidum:52

Q5CFB3              	100.00%		D3BGH1              	100.00%
Bootstrap support for Q5CFB3 as seed ortholog is 97%.
Bootstrap support for D3BGH1 as seed ortholog is 96%.

Group of orthologs #352. Best score 203 bits
Score difference with first non-orthologous sequence - C.hominis:69 P.pallidum:41

Q5CJ39              	100.00%		D3BN50              	100.00%
Q5CHJ7              	17.09%		
Q5CNK3              	13.97%		
Q5CP93              	6.12%		
Bootstrap support for Q5CJ39 as seed ortholog is 97%.
Bootstrap support for D3BN50 as seed ortholog is 88%.

Group of orthologs #353. Best score 203 bits
Score difference with first non-orthologous sequence - C.hominis:203 P.pallidum:96

Q5CJG7              	100.00%		D3BU70              	100.00%
Bootstrap support for Q5CJG7 as seed ortholog is 100%.
Bootstrap support for D3BU70 as seed ortholog is 94%.

Group of orthologs #354. Best score 202 bits
Score difference with first non-orthologous sequence - C.hominis:202 P.pallidum:36

Q5CGJ7              	100.00%		D3AY59              	100.00%
Bootstrap support for Q5CGJ7 as seed ortholog is 100%.
Bootstrap support for D3AY59 as seed ortholog is 91%.

Group of orthologs #355. Best score 202 bits
Score difference with first non-orthologous sequence - C.hominis:50 P.pallidum:118

Q5CN37              	100.00%		D3AXX6              	100.00%
Bootstrap support for Q5CN37 as seed ortholog is 89%.
Bootstrap support for D3AXX6 as seed ortholog is 99%.

Group of orthologs #356. Best score 202 bits
Score difference with first non-orthologous sequence - C.hominis:202 P.pallidum:202

Q5CNF4              	100.00%		D3B3U0              	100.00%
Bootstrap support for Q5CNF4 as seed ortholog is 100%.
Bootstrap support for D3B3U0 as seed ortholog is 100%.

Group of orthologs #357. Best score 202 bits
Score difference with first non-orthologous sequence - C.hominis:80 P.pallidum:63

Q5CKP5              	100.00%		D3BR84              	100.00%
Bootstrap support for Q5CKP5 as seed ortholog is 99%.
Bootstrap support for D3BR84 as seed ortholog is 99%.

Group of orthologs #358. Best score 202 bits
Score difference with first non-orthologous sequence - C.hominis:137 P.pallidum:202

Q5CGJ1              	100.00%		D3BVG5              	100.00%
Bootstrap support for Q5CGJ1 as seed ortholog is 100%.
Bootstrap support for D3BVG5 as seed ortholog is 100%.

Group of orthologs #359. Best score 201 bits
Score difference with first non-orthologous sequence - C.hominis:71 P.pallidum:100

Q5CLI4              	100.00%		D3BPL3              	100.00%
                    	       		D3BP03              	53.11%
Bootstrap support for Q5CLI4 as seed ortholog is 90%.
Bootstrap support for D3BPL3 as seed ortholog is 98%.

Group of orthologs #360. Best score 201 bits
Score difference with first non-orthologous sequence - C.hominis:201 P.pallidum:201

Q5CIY1              	100.00%		D3BT09              	100.00%
Bootstrap support for Q5CIY1 as seed ortholog is 100%.
Bootstrap support for D3BT09 as seed ortholog is 100%.

Group of orthologs #361. Best score 200 bits
Score difference with first non-orthologous sequence - C.hominis:61 P.pallidum:200

Q5CIB3              	100.00%		D3AZN2              	100.00%
                    	       		D3B0C2              	51.14%
Bootstrap support for Q5CIB3 as seed ortholog is 76%.
Bootstrap support for D3AZN2 as seed ortholog is 100%.

Group of orthologs #362. Best score 200 bits
Score difference with first non-orthologous sequence - C.hominis:200 P.pallidum:86

Q5CFH8              	100.00%		D3BD41              	100.00%
                    	       		D3BD39              	85.12%
Bootstrap support for Q5CFH8 as seed ortholog is 100%.
Bootstrap support for D3BD41 as seed ortholog is 99%.

Group of orthologs #363. Best score 200 bits
Score difference with first non-orthologous sequence - C.hominis:200 P.pallidum:20

Q5CIN4              	100.00%		D3BCE4              	100.00%
                    	       		D3BJ60              	5.36%
Bootstrap support for Q5CIN4 as seed ortholog is 100%.
Bootstrap support for D3BCE4 as seed ortholog is 68%.
Alternative seed ortholog is D3B314 (20 bits away from this cluster)

Group of orthologs #364. Best score 200 bits
Score difference with first non-orthologous sequence - C.hominis:200 P.pallidum:49

Q5CLA9              	100.00%		D3BK86              	100.00%
                    	       		D3BG73              	17.97%
Bootstrap support for Q5CLA9 as seed ortholog is 100%.
Bootstrap support for D3BK86 as seed ortholog is 94%.

Group of orthologs #365. Best score 200 bits
Score difference with first non-orthologous sequence - C.hominis:200 P.pallidum:200

Q5CF23              	100.00%		D3AVU4              	100.00%
Bootstrap support for Q5CF23 as seed ortholog is 100%.
Bootstrap support for D3AVU4 as seed ortholog is 100%.

Group of orthologs #366. Best score 199 bits
Score difference with first non-orthologous sequence - C.hominis:199 P.pallidum:199

Q5CL06              	100.00%		D3BPW6              	100.00%
Bootstrap support for Q5CL06 as seed ortholog is 100%.
Bootstrap support for D3BPW6 as seed ortholog is 100%.

Group of orthologs #367. Best score 198 bits
Score difference with first non-orthologous sequence - C.hominis:198 P.pallidum:198

Q5CGE6              	100.00%		D3BFQ0              	100.00%
Bootstrap support for Q5CGE6 as seed ortholog is 100%.
Bootstrap support for D3BFQ0 as seed ortholog is 100%.

Group of orthologs #368. Best score 198 bits
Score difference with first non-orthologous sequence - C.hominis:198 P.pallidum:198

Q5CL93              	100.00%		D3BJN3              	100.00%
Bootstrap support for Q5CL93 as seed ortholog is 100%.
Bootstrap support for D3BJN3 as seed ortholog is 100%.

Group of orthologs #369. Best score 198 bits
Score difference with first non-orthologous sequence - C.hominis:90 P.pallidum:198

Q5CNX4              	100.00%		D3BRX2              	100.00%
Bootstrap support for Q5CNX4 as seed ortholog is 98%.
Bootstrap support for D3BRX2 as seed ortholog is 100%.

Group of orthologs #370. Best score 197 bits
Score difference with first non-orthologous sequence - C.hominis:197 P.pallidum:197

Q5CND5              	100.00%		D3BIX8              	100.00%
Bootstrap support for Q5CND5 as seed ortholog is 100%.
Bootstrap support for D3BIX8 as seed ortholog is 100%.

Group of orthologs #371. Best score 196 bits
Score difference with first non-orthologous sequence - C.hominis:196 P.pallidum:196

Q5CNH1              	100.00%		D3AXW3              	100.00%
Bootstrap support for Q5CNH1 as seed ortholog is 100%.
Bootstrap support for D3AXW3 as seed ortholog is 100%.

Group of orthologs #372. Best score 196 bits
Score difference with first non-orthologous sequence - C.hominis:196 P.pallidum:64

Q5CKN9              	100.00%		D3B2M5              	100.00%
Bootstrap support for Q5CKN9 as seed ortholog is 100%.
Bootstrap support for D3B2M5 as seed ortholog is 98%.

Group of orthologs #373. Best score 195 bits
Score difference with first non-orthologous sequence - C.hominis:195 P.pallidum:90

Q5CLC9              	100.00%		D3B4Z6              	100.00%
Bootstrap support for Q5CLC9 as seed ortholog is 100%.
Bootstrap support for D3B4Z6 as seed ortholog is 97%.

Group of orthologs #374. Best score 195 bits
Score difference with first non-orthologous sequence - C.hominis:69 P.pallidum:30

Q5CJT2              	100.00%		D3BBG2              	100.00%
Bootstrap support for Q5CJT2 as seed ortholog is 99%.
Bootstrap support for D3BBG2 as seed ortholog is 88%.

Group of orthologs #375. Best score 195 bits
Score difference with first non-orthologous sequence - C.hominis:195 P.pallidum:195

Q5CFI4              	100.00%		D3BRB4              	100.00%
Bootstrap support for Q5CFI4 as seed ortholog is 100%.
Bootstrap support for D3BRB4 as seed ortholog is 100%.

Group of orthologs #376. Best score 195 bits
Score difference with first non-orthologous sequence - C.hominis:195 P.pallidum:195

Q5CNS2              	100.00%		D3BKU3              	100.00%
Bootstrap support for Q5CNS2 as seed ortholog is 100%.
Bootstrap support for D3BKU3 as seed ortholog is 100%.

Group of orthologs #377. Best score 195 bits
Score difference with first non-orthologous sequence - C.hominis:122 P.pallidum:96

Q5CP74              	100.00%		D3BVR5              	100.00%
Bootstrap support for Q5CP74 as seed ortholog is 99%.
Bootstrap support for D3BVR5 as seed ortholog is 99%.

Group of orthologs #378. Best score 194 bits
Score difference with first non-orthologous sequence - C.hominis:74 P.pallidum:120

Q5CNH3              	100.00%		D3B2G3              	100.00%
Bootstrap support for Q5CNH3 as seed ortholog is 100%.
Bootstrap support for D3B2G3 as seed ortholog is 99%.

Group of orthologs #379. Best score 194 bits
Score difference with first non-orthologous sequence - C.hominis:194 P.pallidum:91

Q5CN50              	100.00%		D3B7N8              	100.00%
Bootstrap support for Q5CN50 as seed ortholog is 100%.
Bootstrap support for D3B7N8 as seed ortholog is 97%.

Group of orthologs #380. Best score 193 bits
Score difference with first non-orthologous sequence - C.hominis:193 P.pallidum:23

Q5CNN4              	100.00%		D3B6J3              	100.00%
Bootstrap support for Q5CNN4 as seed ortholog is 100%.
Bootstrap support for D3B6J3 as seed ortholog is 69%.
Alternative seed ortholog is D3BV13 (23 bits away from this cluster)

Group of orthologs #381. Best score 193 bits
Score difference with first non-orthologous sequence - C.hominis:193 P.pallidum:193

Q5CNW5              	100.00%		D3B6S2              	100.00%
Bootstrap support for Q5CNW5 as seed ortholog is 100%.
Bootstrap support for D3B6S2 as seed ortholog is 100%.

Group of orthologs #382. Best score 192 bits
Score difference with first non-orthologous sequence - C.hominis:192 P.pallidum:192

Q5CGN4              	100.00%		D3AXK7              	100.00%
Bootstrap support for Q5CGN4 as seed ortholog is 100%.
Bootstrap support for D3AXK7 as seed ortholog is 100%.

Group of orthologs #383. Best score 192 bits
Score difference with first non-orthologous sequence - C.hominis:109 P.pallidum:192

Q5CJA0              	100.00%		D3B763              	100.00%
Bootstrap support for Q5CJA0 as seed ortholog is 100%.
Bootstrap support for D3B763 as seed ortholog is 100%.

Group of orthologs #384. Best score 191 bits
Score difference with first non-orthologous sequence - C.hominis:191 P.pallidum:191

Q5CHK2              	100.00%		D3AXR9              	100.00%
Bootstrap support for Q5CHK2 as seed ortholog is 100%.
Bootstrap support for D3AXR9 as seed ortholog is 100%.

Group of orthologs #385. Best score 191 bits
Score difference with first non-orthologous sequence - C.hominis:191 P.pallidum:71

Q5CGG5              	100.00%		D3B2T9              	100.00%
Bootstrap support for Q5CGG5 as seed ortholog is 100%.
Bootstrap support for D3B2T9 as seed ortholog is 99%.

Group of orthologs #386. Best score 191 bits
Score difference with first non-orthologous sequence - C.hominis:191 P.pallidum:191

Q5CL62              	100.00%		D3B1A8              	100.00%
Bootstrap support for Q5CL62 as seed ortholog is 100%.
Bootstrap support for D3B1A8 as seed ortholog is 100%.

Group of orthologs #387. Best score 191 bits
Score difference with first non-orthologous sequence - C.hominis:191 P.pallidum:191

Q5CH06              	100.00%		D3B5I5              	100.00%
Bootstrap support for Q5CH06 as seed ortholog is 100%.
Bootstrap support for D3B5I5 as seed ortholog is 100%.

Group of orthologs #388. Best score 191 bits
Score difference with first non-orthologous sequence - C.hominis:191 P.pallidum:191

Q5CN61              	100.00%		D3BJ52              	100.00%
Bootstrap support for Q5CN61 as seed ortholog is 100%.
Bootstrap support for D3BJ52 as seed ortholog is 100%.

Group of orthologs #389. Best score 190 bits
Score difference with first non-orthologous sequence - C.hominis:190 P.pallidum:148

Q5CLW1              	100.00%		D3AW31              	100.00%
Bootstrap support for Q5CLW1 as seed ortholog is 100%.
Bootstrap support for D3AW31 as seed ortholog is 99%.

Group of orthologs #390. Best score 190 bits
Score difference with first non-orthologous sequence - C.hominis:190 P.pallidum:190

Q5CNG8              	100.00%		D3B4H2              	100.00%
Bootstrap support for Q5CNG8 as seed ortholog is 100%.
Bootstrap support for D3B4H2 as seed ortholog is 100%.

Group of orthologs #391. Best score 190 bits
Score difference with first non-orthologous sequence - C.hominis:190 P.pallidum:190

Q5CKR8              	100.00%		D3BBQ0              	100.00%
Bootstrap support for Q5CKR8 as seed ortholog is 100%.
Bootstrap support for D3BBQ0 as seed ortholog is 100%.

Group of orthologs #392. Best score 190 bits
Score difference with first non-orthologous sequence - C.hominis:190 P.pallidum:190

Q5CIB6              	100.00%		D3BSM2              	100.00%
Bootstrap support for Q5CIB6 as seed ortholog is 100%.
Bootstrap support for D3BSM2 as seed ortholog is 100%.

Group of orthologs #393. Best score 189 bits
Score difference with first non-orthologous sequence - C.hominis:189 P.pallidum:189

Q5CMA4              	100.00%		D3B0J5              	100.00%
Bootstrap support for Q5CMA4 as seed ortholog is 100%.
Bootstrap support for D3B0J5 as seed ortholog is 100%.

Group of orthologs #394. Best score 189 bits
Score difference with first non-orthologous sequence - C.hominis:189 P.pallidum:189

Q5CL61              	100.00%		D3BB37              	100.00%
Bootstrap support for Q5CL61 as seed ortholog is 100%.
Bootstrap support for D3BB37 as seed ortholog is 100%.

Group of orthologs #395. Best score 189 bits
Score difference with first non-orthologous sequence - C.hominis:189 P.pallidum:189

Q5CMH3              	100.00%		D3BU31              	100.00%
Bootstrap support for Q5CMH3 as seed ortholog is 100%.
Bootstrap support for D3BU31 as seed ortholog is 100%.

Group of orthologs #396. Best score 187 bits
Score difference with first non-orthologous sequence - C.hominis:187 P.pallidum:187

Q5CIN3              	100.00%		D3B5S8              	100.00%
Bootstrap support for Q5CIN3 as seed ortholog is 100%.
Bootstrap support for D3B5S8 as seed ortholog is 100%.

Group of orthologs #397. Best score 186 bits
Score difference with first non-orthologous sequence - C.hominis:186 P.pallidum:186

Q5CMB4              	100.00%		D3BI16              	100.00%
                    	       		D3BS67              	26.73%
Bootstrap support for Q5CMB4 as seed ortholog is 100%.
Bootstrap support for D3BI16 as seed ortholog is 100%.

Group of orthologs #398. Best score 186 bits
Score difference with first non-orthologous sequence - C.hominis:186 P.pallidum:186

Q5CLE3              	100.00%		D3AYJ1              	100.00%
Bootstrap support for Q5CLE3 as seed ortholog is 100%.
Bootstrap support for D3AYJ1 as seed ortholog is 100%.

Group of orthologs #399. Best score 186 bits
Score difference with first non-orthologous sequence - C.hominis:186 P.pallidum:186

Q5CJP6              	100.00%		D3BAF1              	100.00%
Bootstrap support for Q5CJP6 as seed ortholog is 100%.
Bootstrap support for D3BAF1 as seed ortholog is 100%.

Group of orthologs #400. Best score 186 bits
Score difference with first non-orthologous sequence - C.hominis:186 P.pallidum:186

Q5CLH4              	100.00%		D3BI23              	100.00%
Bootstrap support for Q5CLH4 as seed ortholog is 100%.
Bootstrap support for D3BI23 as seed ortholog is 100%.

Group of orthologs #401. Best score 185 bits
Score difference with first non-orthologous sequence - C.hominis:185 P.pallidum:185

Q5CEU5              	100.00%		D3B5I1              	100.00%
Bootstrap support for Q5CEU5 as seed ortholog is 100%.
Bootstrap support for D3B5I1 as seed ortholog is 100%.

Group of orthologs #402. Best score 185 bits
Score difference with first non-orthologous sequence - C.hominis:185 P.pallidum:185

Q5CI24              	100.00%		D3BB44              	100.00%
Bootstrap support for Q5CI24 as seed ortholog is 100%.
Bootstrap support for D3BB44 as seed ortholog is 100%.

Group of orthologs #403. Best score 185 bits
Score difference with first non-orthologous sequence - C.hominis:185 P.pallidum:120

Q5CHH0              	100.00%		D3BM61              	100.00%
Bootstrap support for Q5CHH0 as seed ortholog is 100%.
Bootstrap support for D3BM61 as seed ortholog is 98%.

Group of orthologs #404. Best score 184 bits
Score difference with first non-orthologous sequence - C.hominis:184 P.pallidum:184

Q5CNU4              	100.00%		D3B465              	100.00%
Bootstrap support for Q5CNU4 as seed ortholog is 100%.
Bootstrap support for D3B465 as seed ortholog is 100%.

Group of orthologs #405. Best score 183 bits
Score difference with first non-orthologous sequence - C.hominis:183 P.pallidum:183

Q5CEI8              	100.00%		D3AW49              	100.00%
Bootstrap support for Q5CEI8 as seed ortholog is 100%.
Bootstrap support for D3AW49 as seed ortholog is 100%.

Group of orthologs #406. Best score 183 bits
Score difference with first non-orthologous sequence - C.hominis:183 P.pallidum:183

Q5CEY8              	100.00%		D3B6N9              	100.00%
Bootstrap support for Q5CEY8 as seed ortholog is 100%.
Bootstrap support for D3B6N9 as seed ortholog is 100%.

Group of orthologs #407. Best score 183 bits
Score difference with first non-orthologous sequence - C.hominis:183 P.pallidum:183

Q5CNP4              	100.00%		D3B4A0              	100.00%
Bootstrap support for Q5CNP4 as seed ortholog is 100%.
Bootstrap support for D3B4A0 as seed ortholog is 100%.

Group of orthologs #408. Best score 183 bits
Score difference with first non-orthologous sequence - C.hominis:33 P.pallidum:36

Q5CFI8              	100.00%		D3BF27              	100.00%
Bootstrap support for Q5CFI8 as seed ortholog is 75%.
Bootstrap support for D3BF27 as seed ortholog is 79%.

Group of orthologs #409. Best score 183 bits
Score difference with first non-orthologous sequence - C.hominis:183 P.pallidum:183

Q5CJA5              	100.00%		D3BHJ3              	100.00%
Bootstrap support for Q5CJA5 as seed ortholog is 100%.
Bootstrap support for D3BHJ3 as seed ortholog is 100%.

Group of orthologs #410. Best score 183 bits
Score difference with first non-orthologous sequence - C.hominis:183 P.pallidum:183

Q5CNL8              	100.00%		D3BS99              	100.00%
Bootstrap support for Q5CNL8 as seed ortholog is 100%.
Bootstrap support for D3BS99 as seed ortholog is 100%.

Group of orthologs #411. Best score 182 bits
Score difference with first non-orthologous sequence - C.hominis:182 P.pallidum:123

Q5CJJ5              	100.00%		D3B9R3              	100.00%
Bootstrap support for Q5CJJ5 as seed ortholog is 100%.
Bootstrap support for D3B9R3 as seed ortholog is 98%.

Group of orthologs #412. Best score 181 bits
Score difference with first non-orthologous sequence - C.hominis:181 P.pallidum:181

Q5CJC0              	100.00%		D3AWJ9              	100.00%
Bootstrap support for Q5CJC0 as seed ortholog is 100%.
Bootstrap support for D3AWJ9 as seed ortholog is 100%.

Group of orthologs #413. Best score 180 bits
Score difference with first non-orthologous sequence - C.hominis:180 P.pallidum:84

Q5CM98              	100.00%		D3BV73              	100.00%
                    	       		D3B8N8              	45.45%
                    	       		D3BG57              	35.59%
Bootstrap support for Q5CM98 as seed ortholog is 100%.
Bootstrap support for D3BV73 as seed ortholog is 98%.

Group of orthologs #414. Best score 180 bits
Score difference with first non-orthologous sequence - C.hominis:180 P.pallidum:180

Q5CL43              	100.00%		D3AYA8              	100.00%
Bootstrap support for Q5CL43 as seed ortholog is 100%.
Bootstrap support for D3AYA8 as seed ortholog is 100%.

Group of orthologs #415. Best score 180 bits
Score difference with first non-orthologous sequence - C.hominis:180 P.pallidum:180

Q5CI99              	100.00%		D3B1H2              	100.00%
Bootstrap support for Q5CI99 as seed ortholog is 100%.
Bootstrap support for D3B1H2 as seed ortholog is 100%.

Group of orthologs #416. Best score 180 bits
Score difference with first non-orthologous sequence - C.hominis:180 P.pallidum:180

Q5CKI4              	100.00%		D3BH65              	100.00%
Bootstrap support for Q5CKI4 as seed ortholog is 100%.
Bootstrap support for D3BH65 as seed ortholog is 100%.

Group of orthologs #417. Best score 180 bits
Score difference with first non-orthologous sequence - C.hominis:124 P.pallidum:2

Q5CJX5              	100.00%		D3BMB7              	100.00%
Bootstrap support for Q5CJX5 as seed ortholog is 99%.
Bootstrap support for D3BMB7 as seed ortholog is 53%.
Alternative seed ortholog is D3B233 (2 bits away from this cluster)

Group of orthologs #418. Best score 179 bits
Score difference with first non-orthologous sequence - C.hominis:179 P.pallidum:62

Q5CMI6              	100.00%		D3BIL4              	100.00%
Bootstrap support for Q5CMI6 as seed ortholog is 100%.
Bootstrap support for D3BIL4 as seed ortholog is 97%.

Group of orthologs #419. Best score 179 bits
Score difference with first non-orthologous sequence - C.hominis:179 P.pallidum:179

Q5CIE7              	100.00%		D3BTD9              	100.00%
Bootstrap support for Q5CIE7 as seed ortholog is 100%.
Bootstrap support for D3BTD9 as seed ortholog is 100%.

Group of orthologs #420. Best score 179 bits
Score difference with first non-orthologous sequence - C.hominis:179 P.pallidum:179

Q5CJW0              	100.00%		D3BVL2              	100.00%
Bootstrap support for Q5CJW0 as seed ortholog is 100%.
Bootstrap support for D3BVL2 as seed ortholog is 100%.

Group of orthologs #421. Best score 178 bits
Score difference with first non-orthologous sequence - C.hominis:178 P.pallidum:178

Q5CH91              	100.00%		D3B418              	100.00%
Bootstrap support for Q5CH91 as seed ortholog is 100%.
Bootstrap support for D3B418 as seed ortholog is 100%.

Group of orthologs #422. Best score 176 bits
Score difference with first non-orthologous sequence - C.hominis:176 P.pallidum:176

Q5CNX0              	100.00%		D3BC04              	100.00%
                    	       		D3BLZ2              	6.55%
Bootstrap support for Q5CNX0 as seed ortholog is 100%.
Bootstrap support for D3BC04 as seed ortholog is 100%.

Group of orthologs #423. Best score 176 bits
Score difference with first non-orthologous sequence - C.hominis:176 P.pallidum:176

Q5CNE7              	100.00%		D3B5J6              	100.00%
Bootstrap support for Q5CNE7 as seed ortholog is 100%.
Bootstrap support for D3B5J6 as seed ortholog is 100%.

Group of orthologs #424. Best score 176 bits
Score difference with first non-orthologous sequence - C.hominis:176 P.pallidum:176

Q5CJQ2              	100.00%		D3BMJ9              	100.00%
Bootstrap support for Q5CJQ2 as seed ortholog is 100%.
Bootstrap support for D3BMJ9 as seed ortholog is 100%.

Group of orthologs #425. Best score 175 bits
Score difference with first non-orthologous sequence - C.hominis:79 P.pallidum:175

Q5CG62              	100.00%		D3B4H6              	100.00%
Bootstrap support for Q5CG62 as seed ortholog is 92%.
Bootstrap support for D3B4H6 as seed ortholog is 100%.

Group of orthologs #426. Best score 175 bits
Score difference with first non-orthologous sequence - C.hominis:125 P.pallidum:95

Q5CNA1              	100.00%		D3BBN6              	100.00%
Bootstrap support for Q5CNA1 as seed ortholog is 100%.
Bootstrap support for D3BBN6 as seed ortholog is 99%.

Group of orthologs #427. Best score 175 bits
Score difference with first non-orthologous sequence - C.hominis:175 P.pallidum:175

Q5CKF8              	100.00%		D3BMZ6              	100.00%
Bootstrap support for Q5CKF8 as seed ortholog is 100%.
Bootstrap support for D3BMZ6 as seed ortholog is 100%.

Group of orthologs #428. Best score 174 bits
Score difference with first non-orthologous sequence - C.hominis:78 P.pallidum:174

Q5CHK1              	100.00%		D3B0W4              	100.00%
Bootstrap support for Q5CHK1 as seed ortholog is 54%.
Alternative seed ortholog is Q5CJC8 (78 bits away from this cluster)
Bootstrap support for D3B0W4 as seed ortholog is 100%.

Group of orthologs #429. Best score 174 bits
Score difference with first non-orthologous sequence - C.hominis:174 P.pallidum:174

Q5CIN7              	100.00%		D3B725              	100.00%
Bootstrap support for Q5CIN7 as seed ortholog is 100%.
Bootstrap support for D3B725 as seed ortholog is 100%.

Group of orthologs #430. Best score 174 bits
Score difference with first non-orthologous sequence - C.hominis:174 P.pallidum:52

Q5CIY5              	100.00%		D3BUS9              	100.00%
Bootstrap support for Q5CIY5 as seed ortholog is 100%.
Bootstrap support for D3BUS9 as seed ortholog is 63%.
Alternative seed ortholog is D3B9Q5 (52 bits away from this cluster)

Group of orthologs #431. Best score 172 bits
Score difference with first non-orthologous sequence - C.hominis:172 P.pallidum:172

Q5CFD6              	100.00%		D3BMQ1              	100.00%
Bootstrap support for Q5CFD6 as seed ortholog is 100%.
Bootstrap support for D3BMQ1 as seed ortholog is 100%.

Group of orthologs #432. Best score 172 bits
Score difference with first non-orthologous sequence - C.hominis:172 P.pallidum:172

Q5CGE4              	100.00%		D3BMX5              	100.00%
Bootstrap support for Q5CGE4 as seed ortholog is 100%.
Bootstrap support for D3BMX5 as seed ortholog is 100%.

Group of orthologs #433. Best score 172 bits
Score difference with first non-orthologous sequence - C.hominis:172 P.pallidum:172

Q5CPB9              	100.00%		D3BI96              	100.00%
Bootstrap support for Q5CPB9 as seed ortholog is 100%.
Bootstrap support for D3BI96 as seed ortholog is 100%.

Group of orthologs #434. Best score 171 bits
Score difference with first non-orthologous sequence - C.hominis:171 P.pallidum:171

Q5CLK6              	100.00%		D3AY02              	100.00%
Bootstrap support for Q5CLK6 as seed ortholog is 100%.
Bootstrap support for D3AY02 as seed ortholog is 100%.

Group of orthologs #435. Best score 171 bits
Score difference with first non-orthologous sequence - C.hominis:171 P.pallidum:171

Q5CMS0              	100.00%		D3B586              	100.00%
Bootstrap support for Q5CMS0 as seed ortholog is 100%.
Bootstrap support for D3B586 as seed ortholog is 100%.

Group of orthologs #436. Best score 171 bits
Score difference with first non-orthologous sequence - C.hominis:127 P.pallidum:97

Q5CIX6              	100.00%		D3BVF8              	100.00%
Bootstrap support for Q5CIX6 as seed ortholog is 99%.
Bootstrap support for D3BVF8 as seed ortholog is 99%.

Group of orthologs #437. Best score 171 bits
Score difference with first non-orthologous sequence - C.hominis:171 P.pallidum:171

Q5CNJ4              	100.00%		D3BQV7              	100.00%
Bootstrap support for Q5CNJ4 as seed ortholog is 100%.
Bootstrap support for D3BQV7 as seed ortholog is 100%.

Group of orthologs #438. Best score 170 bits
Score difference with first non-orthologous sequence - C.hominis:170 P.pallidum:170

Q5CKP2              	100.00%		D3B0K6              	100.00%
Bootstrap support for Q5CKP2 as seed ortholog is 100%.
Bootstrap support for D3B0K6 as seed ortholog is 100%.

Group of orthologs #439. Best score 170 bits
Score difference with first non-orthologous sequence - C.hominis:170 P.pallidum:170

Q5CGB7              	100.00%		D3B9G8              	100.00%
Bootstrap support for Q5CGB7 as seed ortholog is 100%.
Bootstrap support for D3B9G8 as seed ortholog is 100%.

Group of orthologs #440. Best score 170 bits
Score difference with first non-orthologous sequence - C.hominis:170 P.pallidum:170

Q5CEQ1              	100.00%		D3BCA4              	100.00%
Bootstrap support for Q5CEQ1 as seed ortholog is 100%.
Bootstrap support for D3BCA4 as seed ortholog is 100%.

Group of orthologs #441. Best score 170 bits
Score difference with first non-orthologous sequence - C.hominis:170 P.pallidum:170

Q5CH17              	100.00%		D3BEC2              	100.00%
Bootstrap support for Q5CH17 as seed ortholog is 100%.
Bootstrap support for D3BEC2 as seed ortholog is 100%.

Group of orthologs #442. Best score 170 bits
Score difference with first non-orthologous sequence - C.hominis:170 P.pallidum:170

Q5CM55              	100.00%		D3BFU2              	100.00%
Bootstrap support for Q5CM55 as seed ortholog is 100%.
Bootstrap support for D3BFU2 as seed ortholog is 100%.

Group of orthologs #443. Best score 170 bits
Score difference with first non-orthologous sequence - C.hominis:170 P.pallidum:170

Q5CNL2              	100.00%		D3BIM8              	100.00%
Bootstrap support for Q5CNL2 as seed ortholog is 100%.
Bootstrap support for D3BIM8 as seed ortholog is 100%.

Group of orthologs #444. Best score 169 bits
Score difference with first non-orthologous sequence - C.hominis:169 P.pallidum:169

Q5CIK2              	100.00%		D3BBP3              	100.00%
Bootstrap support for Q5CIK2 as seed ortholog is 100%.
Bootstrap support for D3BBP3 as seed ortholog is 100%.

Group of orthologs #445. Best score 167 bits
Score difference with first non-orthologous sequence - C.hominis:167 P.pallidum:167

Q5CFU3              	100.00%		D3BN47              	100.00%
Bootstrap support for Q5CFU3 as seed ortholog is 100%.
Bootstrap support for D3BN47 as seed ortholog is 100%.

Group of orthologs #446. Best score 167 bits
Score difference with first non-orthologous sequence - C.hominis:167 P.pallidum:16

Q5CEK9              	100.00%		D3BU73              	100.00%
Bootstrap support for Q5CEK9 as seed ortholog is 100%.
Bootstrap support for D3BU73 as seed ortholog is 81%.

Group of orthologs #447. Best score 166 bits
Score difference with first non-orthologous sequence - C.hominis:166 P.pallidum:166

Q5CLN3              	100.00%		D3BCZ8              	100.00%
Bootstrap support for Q5CLN3 as seed ortholog is 100%.
Bootstrap support for D3BCZ8 as seed ortholog is 100%.

Group of orthologs #448. Best score 166 bits
Score difference with first non-orthologous sequence - C.hominis:166 P.pallidum:166

Q5CI85              	100.00%		D3BSQ9              	100.00%
Bootstrap support for Q5CI85 as seed ortholog is 100%.
Bootstrap support for D3BSQ9 as seed ortholog is 100%.

Group of orthologs #449. Best score 166 bits
Score difference with first non-orthologous sequence - C.hominis:51 P.pallidum:166

Q5CPA2              	100.00%		D3BMB1              	100.00%
Bootstrap support for Q5CPA2 as seed ortholog is 91%.
Bootstrap support for D3BMB1 as seed ortholog is 100%.

Group of orthologs #450. Best score 165 bits
Score difference with first non-orthologous sequence - C.hominis:165 P.pallidum:44

Q5CK39              	100.00%		D3B1Z1              	100.00%
Bootstrap support for Q5CK39 as seed ortholog is 100%.
Bootstrap support for D3B1Z1 as seed ortholog is 86%.

Group of orthologs #451. Best score 165 bits
Score difference with first non-orthologous sequence - C.hominis:165 P.pallidum:165

Q5CEI4              	100.00%		D3B7Z4              	100.00%
Bootstrap support for Q5CEI4 as seed ortholog is 100%.
Bootstrap support for D3B7Z4 as seed ortholog is 100%.

Group of orthologs #452. Best score 165 bits
Score difference with first non-orthologous sequence - C.hominis:165 P.pallidum:165

Q5CNW7              	100.00%		D3B9B9              	100.00%
Bootstrap support for Q5CNW7 as seed ortholog is 100%.
Bootstrap support for D3B9B9 as seed ortholog is 100%.

Group of orthologs #453. Best score 164 bits
Score difference with first non-orthologous sequence - C.hominis:164 P.pallidum:164

Q5CFX6              	100.00%		D3BDL6              	100.00%
Bootstrap support for Q5CFX6 as seed ortholog is 100%.
Bootstrap support for D3BDL6 as seed ortholog is 100%.

Group of orthologs #454. Best score 164 bits
Score difference with first non-orthologous sequence - C.hominis:164 P.pallidum:164

Q5CLY7              	100.00%		D3BJX9              	100.00%
Bootstrap support for Q5CLY7 as seed ortholog is 100%.
Bootstrap support for D3BJX9 as seed ortholog is 100%.

Group of orthologs #455. Best score 163 bits
Score difference with first non-orthologous sequence - C.hominis:19 P.pallidum:163

Q5CGD8              	100.00%		D3B224              	100.00%
                    	       		D3BEA1              	5.91%
Bootstrap support for Q5CGD8 as seed ortholog is 82%.
Bootstrap support for D3B224 as seed ortholog is 100%.

Group of orthologs #456. Best score 163 bits
Score difference with first non-orthologous sequence - C.hominis:163 P.pallidum:163

Q5CG24              	100.00%		D3BCI5              	100.00%
                    	       		D3AXW2              	6.43%
Bootstrap support for Q5CG24 as seed ortholog is 100%.
Bootstrap support for D3BCI5 as seed ortholog is 100%.

Group of orthologs #457. Best score 163 bits
Score difference with first non-orthologous sequence - C.hominis:163 P.pallidum:163

Q5CP41              	100.00%		D3BDR3              	100.00%
                    	       		D3BME1              	18.14%
Bootstrap support for Q5CP41 as seed ortholog is 100%.
Bootstrap support for D3BDR3 as seed ortholog is 100%.

Group of orthologs #458. Best score 162 bits
Score difference with first non-orthologous sequence - C.hominis:162 P.pallidum:162

Q5CK05              	100.00%		D3AZD5              	100.00%
Bootstrap support for Q5CK05 as seed ortholog is 100%.
Bootstrap support for D3AZD5 as seed ortholog is 100%.

Group of orthologs #459. Best score 162 bits
Score difference with first non-orthologous sequence - C.hominis:162 P.pallidum:162

Q5CIK9              	100.00%		D3B3C0              	100.00%
Bootstrap support for Q5CIK9 as seed ortholog is 100%.
Bootstrap support for D3B3C0 as seed ortholog is 100%.

Group of orthologs #460. Best score 162 bits
Score difference with first non-orthologous sequence - C.hominis:162 P.pallidum:162

Q5CGD5              	100.00%		D3BA91              	100.00%
Bootstrap support for Q5CGD5 as seed ortholog is 100%.
Bootstrap support for D3BA91 as seed ortholog is 100%.

Group of orthologs #461. Best score 162 bits
Score difference with first non-orthologous sequence - C.hominis:67 P.pallidum:21

Q5CKV3              	100.00%		D3BSG7              	100.00%
Bootstrap support for Q5CKV3 as seed ortholog is 99%.
Bootstrap support for D3BSG7 as seed ortholog is 75%.

Group of orthologs #462. Best score 161 bits
Score difference with first non-orthologous sequence - C.hominis:161 P.pallidum:161

Q5CE95              	100.00%		D3BL07              	100.00%
                    	       		D3B3C1              	14.64%
Bootstrap support for Q5CE95 as seed ortholog is 100%.
Bootstrap support for D3BL07 as seed ortholog is 100%.

Group of orthologs #463. Best score 161 bits
Score difference with first non-orthologous sequence - C.hominis:77 P.pallidum:70

Q5CJQ8              	100.00%		D3B5U7              	100.00%
Bootstrap support for Q5CJQ8 as seed ortholog is 96%.
Bootstrap support for D3B5U7 as seed ortholog is 92%.

Group of orthologs #464. Best score 161 bits
Score difference with first non-orthologous sequence - C.hominis:161 P.pallidum:161

Q5CKN6              	100.00%		D3BPP6              	100.00%
Bootstrap support for Q5CKN6 as seed ortholog is 100%.
Bootstrap support for D3BPP6 as seed ortholog is 100%.

Group of orthologs #465. Best score 160 bits
Score difference with first non-orthologous sequence - C.hominis:160 P.pallidum:160

Q5CF49              	100.00%		D3AYZ9              	100.00%
Bootstrap support for Q5CF49 as seed ortholog is 100%.
Bootstrap support for D3AYZ9 as seed ortholog is 100%.

Group of orthologs #466. Best score 160 bits
Score difference with first non-orthologous sequence - C.hominis:160 P.pallidum:160

Q5CEY5              	100.00%		D3B439              	100.00%
Bootstrap support for Q5CEY5 as seed ortholog is 100%.
Bootstrap support for D3B439 as seed ortholog is 100%.

Group of orthologs #467. Best score 160 bits
Score difference with first non-orthologous sequence - C.hominis:160 P.pallidum:160

Q5CGZ1              	100.00%		D3BM72              	100.00%
Bootstrap support for Q5CGZ1 as seed ortholog is 100%.
Bootstrap support for D3BM72 as seed ortholog is 100%.

Group of orthologs #468. Best score 160 bits
Score difference with first non-orthologous sequence - C.hominis:160 P.pallidum:160

Q5CFE8              	100.00%		D3BTM7              	100.00%
Bootstrap support for Q5CFE8 as seed ortholog is 100%.
Bootstrap support for D3BTM7 as seed ortholog is 100%.

Group of orthologs #469. Best score 159 bits
Score difference with first non-orthologous sequence - C.hominis:159 P.pallidum:159

Q5CGV1              	100.00%		D3BGI1              	100.00%
                    	       		D3BSZ1              	19.78%
                    	       		D3B8C9              	15.35%
Bootstrap support for Q5CGV1 as seed ortholog is 100%.
Bootstrap support for D3BGI1 as seed ortholog is 100%.

Group of orthologs #470. Best score 159 bits
Score difference with first non-orthologous sequence - C.hominis:159 P.pallidum:159

Q5CJF6              	100.00%		D3BTM5              	100.00%
Bootstrap support for Q5CJF6 as seed ortholog is 100%.
Bootstrap support for D3BTM5 as seed ortholog is 100%.

Group of orthologs #471. Best score 158 bits
Score difference with first non-orthologous sequence - C.hominis:158 P.pallidum:158

Q5CGN5              	100.00%		D3AXV6              	100.00%
Bootstrap support for Q5CGN5 as seed ortholog is 100%.
Bootstrap support for D3AXV6 as seed ortholog is 100%.

Group of orthologs #472. Best score 158 bits
Score difference with first non-orthologous sequence - C.hominis:158 P.pallidum:158

Q5CMM3              	100.00%		D3BKX3              	100.00%
Bootstrap support for Q5CMM3 as seed ortholog is 100%.
Bootstrap support for D3BKX3 as seed ortholog is 100%.

Group of orthologs #473. Best score 158 bits
Score difference with first non-orthologous sequence - C.hominis:90 P.pallidum:158

Q5CHU2              	100.00%		D3BTD3              	100.00%
Bootstrap support for Q5CHU2 as seed ortholog is 96%.
Bootstrap support for D3BTD3 as seed ortholog is 100%.

Group of orthologs #474. Best score 157 bits
Score difference with first non-orthologous sequence - C.hominis:59 P.pallidum:60

Q5CFN7              	100.00%		D3B0N1              	100.00%
                    	       		D3BFJ1              	15.56%
Bootstrap support for Q5CFN7 as seed ortholog is 99%.
Bootstrap support for D3B0N1 as seed ortholog is 98%.

Group of orthologs #475. Best score 156 bits
Score difference with first non-orthologous sequence - C.hominis:156 P.pallidum:156

Q5CF07              	100.00%		D3BBQ8              	100.00%
Bootstrap support for Q5CF07 as seed ortholog is 100%.
Bootstrap support for D3BBQ8 as seed ortholog is 100%.

Group of orthologs #476. Best score 156 bits
Score difference with first non-orthologous sequence - C.hominis:156 P.pallidum:156

Q5CNY4              	100.00%		D3B3Z0              	100.00%
Bootstrap support for Q5CNY4 as seed ortholog is 100%.
Bootstrap support for D3B3Z0 as seed ortholog is 100%.

Group of orthologs #477. Best score 155 bits
Score difference with first non-orthologous sequence - C.hominis:73 P.pallidum:155

Q5CEB8              	100.00%		D3AWL9              	100.00%
Bootstrap support for Q5CEB8 as seed ortholog is 96%.
Bootstrap support for D3AWL9 as seed ortholog is 100%.

Group of orthologs #478. Best score 155 bits
Score difference with first non-orthologous sequence - C.hominis:155 P.pallidum:47

Q5CK93              	100.00%		D3AW96              	100.00%
Bootstrap support for Q5CK93 as seed ortholog is 100%.
Bootstrap support for D3AW96 as seed ortholog is 95%.

Group of orthologs #479. Best score 155 bits
Score difference with first non-orthologous sequence - C.hominis:155 P.pallidum:155

Q5CK34              	100.00%		D3B6L1              	100.00%
Bootstrap support for Q5CK34 as seed ortholog is 100%.
Bootstrap support for D3B6L1 as seed ortholog is 100%.

Group of orthologs #480. Best score 155 bits
Score difference with first non-orthologous sequence - C.hominis:155 P.pallidum:18

Q5CEK2              	100.00%		D3BIG3              	100.00%
Bootstrap support for Q5CEK2 as seed ortholog is 100%.
Bootstrap support for D3BIG3 as seed ortholog is 45%.
Alternative seed ortholog is D3BH32 (18 bits away from this cluster)

Group of orthologs #481. Best score 155 bits
Score difference with first non-orthologous sequence - C.hominis:155 P.pallidum:60

Q5CL52              	100.00%		D3BUV0              	100.00%
Bootstrap support for Q5CL52 as seed ortholog is 100%.
Bootstrap support for D3BUV0 as seed ortholog is 95%.

Group of orthologs #482. Best score 154 bits
Score difference with first non-orthologous sequence - C.hominis:154 P.pallidum:154

Q5CFB9              	100.00%		D3B6L2              	100.00%
Bootstrap support for Q5CFB9 as seed ortholog is 100%.
Bootstrap support for D3B6L2 as seed ortholog is 100%.

Group of orthologs #483. Best score 154 bits
Score difference with first non-orthologous sequence - C.hominis:154 P.pallidum:154

Q5CGP9              	100.00%		D3BCY5              	100.00%
Bootstrap support for Q5CGP9 as seed ortholog is 100%.
Bootstrap support for D3BCY5 as seed ortholog is 100%.

Group of orthologs #484. Best score 153 bits
Score difference with first non-orthologous sequence - C.hominis:153 P.pallidum:153

Q5CKX3              	100.00%		D3BNJ7              	100.00%
                    	       		D3BG38              	32.94%
Bootstrap support for Q5CKX3 as seed ortholog is 100%.
Bootstrap support for D3BNJ7 as seed ortholog is 100%.

Group of orthologs #485. Best score 153 bits
Score difference with first non-orthologous sequence - C.hominis:153 P.pallidum:153

Q5CMB2              	100.00%		D3B615              	100.00%
Bootstrap support for Q5CMB2 as seed ortholog is 100%.
Bootstrap support for D3B615 as seed ortholog is 100%.

Group of orthologs #486. Best score 153 bits
Score difference with first non-orthologous sequence - C.hominis:153 P.pallidum:98

Q5CM61              	100.00%		D3B7E1              	100.00%
Bootstrap support for Q5CM61 as seed ortholog is 100%.
Bootstrap support for D3B7E1 as seed ortholog is 99%.

Group of orthologs #487. Best score 153 bits
Score difference with first non-orthologous sequence - C.hominis:153 P.pallidum:153

Q5CFU1              	100.00%		D3BFX3              	100.00%
Bootstrap support for Q5CFU1 as seed ortholog is 100%.
Bootstrap support for D3BFX3 as seed ortholog is 100%.

Group of orthologs #488. Best score 153 bits
Score difference with first non-orthologous sequence - C.hominis:153 P.pallidum:153

Q5CNJ9              	100.00%		D3BBM0              	100.00%
Bootstrap support for Q5CNJ9 as seed ortholog is 100%.
Bootstrap support for D3BBM0 as seed ortholog is 100%.

Group of orthologs #489. Best score 153 bits
Score difference with first non-orthologous sequence - C.hominis:153 P.pallidum:153

Q5CIZ8              	100.00%		D3BGC7              	100.00%
Bootstrap support for Q5CIZ8 as seed ortholog is 100%.
Bootstrap support for D3BGC7 as seed ortholog is 100%.

Group of orthologs #490. Best score 153 bits
Score difference with first non-orthologous sequence - C.hominis:153 P.pallidum:153

Q5CI54              	100.00%		D3BLD1              	100.00%
Bootstrap support for Q5CI54 as seed ortholog is 100%.
Bootstrap support for D3BLD1 as seed ortholog is 100%.

Group of orthologs #491. Best score 153 bits
Score difference with first non-orthologous sequence - C.hominis:153 P.pallidum:74

Q5CH05              	100.00%		D3BRV0              	100.00%
Bootstrap support for Q5CH05 as seed ortholog is 100%.
Bootstrap support for D3BRV0 as seed ortholog is 99%.

Group of orthologs #492. Best score 152 bits
Score difference with first non-orthologous sequence - C.hominis:152 P.pallidum:152

Q5CLD8              	100.00%		D3B437              	100.00%
Bootstrap support for Q5CLD8 as seed ortholog is 100%.
Bootstrap support for D3B437 as seed ortholog is 100%.

Group of orthologs #493. Best score 152 bits
Score difference with first non-orthologous sequence - C.hominis:152 P.pallidum:152

Q5CGQ0              	100.00%		D3BPL5              	100.00%
Bootstrap support for Q5CGQ0 as seed ortholog is 100%.
Bootstrap support for D3BPL5 as seed ortholog is 100%.

Group of orthologs #494. Best score 151 bits
Score difference with first non-orthologous sequence - C.hominis:151 P.pallidum:151

Q5CNI2              	100.00%		D3BCB9              	100.00%
Bootstrap support for Q5CNI2 as seed ortholog is 100%.
Bootstrap support for D3BCB9 as seed ortholog is 100%.

Group of orthologs #495. Best score 151 bits
Score difference with first non-orthologous sequence - C.hominis:151 P.pallidum:60

Q5CJ02              	100.00%		D3BM05              	100.00%
Bootstrap support for Q5CJ02 as seed ortholog is 100%.
Bootstrap support for D3BM05 as seed ortholog is 80%.

Group of orthologs #496. Best score 151 bits
Score difference with first non-orthologous sequence - C.hominis:151 P.pallidum:151

Q5CIL6              	100.00%		D3BNZ1              	100.00%
Bootstrap support for Q5CIL6 as seed ortholog is 100%.
Bootstrap support for D3BNZ1 as seed ortholog is 100%.

Group of orthologs #497. Best score 151 bits
Score difference with first non-orthologous sequence - C.hominis:151 P.pallidum:151

Q5CK96              	100.00%		D3BPV1              	100.00%
Bootstrap support for Q5CK96 as seed ortholog is 100%.
Bootstrap support for D3BPV1 as seed ortholog is 100%.

Group of orthologs #498. Best score 150 bits
Score difference with first non-orthologous sequence - C.hominis:150 P.pallidum:150

Q5CM50              	100.00%		D3BA80              	100.00%
Bootstrap support for Q5CM50 as seed ortholog is 100%.
Bootstrap support for D3BA80 as seed ortholog is 100%.

Group of orthologs #499. Best score 149 bits
Score difference with first non-orthologous sequence - C.hominis:149 P.pallidum:48

Q5CGV7              	100.00%		D3BJM3              	100.00%
                    	       		D3BPM9              	6.19%
Bootstrap support for Q5CGV7 as seed ortholog is 100%.
Bootstrap support for D3BJM3 as seed ortholog is 92%.

Group of orthologs #500. Best score 149 bits
Score difference with first non-orthologous sequence - C.hominis:149 P.pallidum:149

Q5CHF0              	100.00%		D3B1Z3              	100.00%
Bootstrap support for Q5CHF0 as seed ortholog is 100%.
Bootstrap support for D3B1Z3 as seed ortholog is 100%.

Group of orthologs #501. Best score 149 bits
Score difference with first non-orthologous sequence - C.hominis:149 P.pallidum:149

Q5CH66              	100.00%		D3BIM4              	100.00%
Bootstrap support for Q5CH66 as seed ortholog is 100%.
Bootstrap support for D3BIM4 as seed ortholog is 100%.

Group of orthologs #502. Best score 149 bits
Score difference with first non-orthologous sequence - C.hominis:149 P.pallidum:149

Q5CNV4              	100.00%		D3BQU5              	100.00%
Bootstrap support for Q5CNV4 as seed ortholog is 100%.
Bootstrap support for D3BQU5 as seed ortholog is 100%.

Group of orthologs #503. Best score 148 bits
Score difference with first non-orthologous sequence - C.hominis:148 P.pallidum:148

Q5CN60              	100.00%		D3AWN6              	100.00%
                    	       		D3BIG9              	21.54%
Bootstrap support for Q5CN60 as seed ortholog is 100%.
Bootstrap support for D3AWN6 as seed ortholog is 100%.

Group of orthologs #504. Best score 148 bits
Score difference with first non-orthologous sequence - C.hominis:148 P.pallidum:83

Q5CI30              	100.00%		D3BB02              	100.00%
Bootstrap support for Q5CI30 as seed ortholog is 100%.
Bootstrap support for D3BB02 as seed ortholog is 99%.

Group of orthologs #505. Best score 148 bits
Score difference with first non-orthologous sequence - C.hominis:148 P.pallidum:148

Q5CE71              	100.00%		D3BHF9              	100.00%
Bootstrap support for Q5CE71 as seed ortholog is 100%.
Bootstrap support for D3BHF9 as seed ortholog is 100%.

Group of orthologs #506. Best score 148 bits
Score difference with first non-orthologous sequence - C.hominis:20 P.pallidum:54

Q5CFY2              	100.00%		D3BFQ8              	100.00%
Bootstrap support for Q5CFY2 as seed ortholog is 70%.
Alternative seed ortholog is Q5CKH6 (20 bits away from this cluster)
Bootstrap support for D3BFQ8 as seed ortholog is 97%.

Group of orthologs #507. Best score 147 bits
Score difference with first non-orthologous sequence - C.hominis:17 P.pallidum:147

Q5CM00              	100.00%		D3BJU6              	100.00%
                    	       		D3BL27              	21.52%
Bootstrap support for Q5CM00 as seed ortholog is 78%.
Bootstrap support for D3BJU6 as seed ortholog is 100%.

Group of orthologs #508. Best score 147 bits
Score difference with first non-orthologous sequence - C.hominis:73 P.pallidum:58

Q5CFQ8              	100.00%		D3BQ64              	100.00%
Bootstrap support for Q5CFQ8 as seed ortholog is 96%.
Bootstrap support for D3BQ64 as seed ortholog is 86%.

Group of orthologs #509. Best score 146 bits
Score difference with first non-orthologous sequence - C.hominis:146 P.pallidum:146

Q5CMQ5              	100.00%		D3BSU4              	100.00%
Bootstrap support for Q5CMQ5 as seed ortholog is 100%.
Bootstrap support for D3BSU4 as seed ortholog is 100%.

Group of orthologs #510. Best score 145 bits
Score difference with first non-orthologous sequence - C.hominis:83 P.pallidum:46

Q5CNK0              	100.00%		D3BAH5              	100.00%
Bootstrap support for Q5CNK0 as seed ortholog is 98%.
Bootstrap support for D3BAH5 as seed ortholog is 85%.

Group of orthologs #511. Best score 144 bits
Score difference with first non-orthologous sequence - C.hominis:144 P.pallidum:144

Q5CJU7              	100.00%		D3AVU9              	100.00%
Bootstrap support for Q5CJU7 as seed ortholog is 100%.
Bootstrap support for D3AVU9 as seed ortholog is 100%.

Group of orthologs #512. Best score 144 bits
Score difference with first non-orthologous sequence - C.hominis:144 P.pallidum:61

Q5CJJ2              	100.00%		D3BJB1              	100.00%
Bootstrap support for Q5CJJ2 as seed ortholog is 100%.
Bootstrap support for D3BJB1 as seed ortholog is 99%.

Group of orthologs #513. Best score 143 bits
Score difference with first non-orthologous sequence - C.hominis:143 P.pallidum:143

Q5CMM9              	100.00%		D3B3S8              	100.00%
Bootstrap support for Q5CMM9 as seed ortholog is 100%.
Bootstrap support for D3B3S8 as seed ortholog is 100%.

Group of orthologs #514. Best score 143 bits
Score difference with first non-orthologous sequence - C.hominis:143 P.pallidum:3

Q5CNU6              	100.00%		D3B2S7              	100.00%
Bootstrap support for Q5CNU6 as seed ortholog is 100%.
Bootstrap support for D3B2S7 as seed ortholog is 45%.
Alternative seed ortholog is D3B7E4 (3 bits away from this cluster)

Group of orthologs #515. Best score 143 bits
Score difference with first non-orthologous sequence - C.hominis:143 P.pallidum:143

Q5CFW2              	100.00%		D3BIR0              	100.00%
Bootstrap support for Q5CFW2 as seed ortholog is 100%.
Bootstrap support for D3BIR0 as seed ortholog is 100%.

Group of orthologs #516. Best score 142 bits
Score difference with first non-orthologous sequence - C.hominis:48 P.pallidum:1

Q5CGJ4              	100.00%		D3BPH9              	100.00%
Bootstrap support for Q5CGJ4 as seed ortholog is 97%.
Bootstrap support for D3BPH9 as seed ortholog is 47%.
Alternative seed ortholog is D3BM67 (1 bits away from this cluster)

Group of orthologs #517. Best score 142 bits
Score difference with first non-orthologous sequence - C.hominis:142 P.pallidum:142

Q5CLR3              	100.00%		D3BNG5              	100.00%
Bootstrap support for Q5CLR3 as seed ortholog is 100%.
Bootstrap support for D3BNG5 as seed ortholog is 100%.

Group of orthologs #518. Best score 141 bits
Score difference with first non-orthologous sequence - C.hominis:34 P.pallidum:17

Q5CP15              	100.00%		D3BM92              	100.00%
                    	       		D3BAM1              	14.32%
                    	       		D3B9N2              	12.74%
                    	       		D3AY23              	12.59%
                    	       		D3B128              	11.54%
                    	       		D3BQR1              	10.34%
                    	       		D3AZY1              	10.12%
                    	       		D3BCY7              	6.97%
                    	       		D3BP85              	5.10%
Bootstrap support for Q5CP15 as seed ortholog is 79%.
Bootstrap support for D3BM92 as seed ortholog is 64%.
Alternative seed ortholog is D3AYR5 (17 bits away from this cluster)

Group of orthologs #519. Best score 141 bits
Score difference with first non-orthologous sequence - C.hominis:141 P.pallidum:141

Q5CK77              	100.00%		D3BLT5              	100.00%
Q5CIG2              	9.50%		
Bootstrap support for Q5CK77 as seed ortholog is 100%.
Bootstrap support for D3BLT5 as seed ortholog is 100%.

Group of orthologs #520. Best score 141 bits
Score difference with first non-orthologous sequence - C.hominis:141 P.pallidum:77

Q5CIH5              	100.00%		D3BFK6              	100.00%
Bootstrap support for Q5CIH5 as seed ortholog is 100%.
Bootstrap support for D3BFK6 as seed ortholog is 93%.

Group of orthologs #521. Best score 139 bits
Score difference with first non-orthologous sequence - C.hominis:139 P.pallidum:139

Q5CJA6              	100.00%		D3AW01              	100.00%
Bootstrap support for Q5CJA6 as seed ortholog is 100%.
Bootstrap support for D3AW01 as seed ortholog is 100%.

Group of orthologs #522. Best score 139 bits
Score difference with first non-orthologous sequence - C.hominis:139 P.pallidum:139

Q5CJW5              	100.00%		D3BM88              	100.00%
Bootstrap support for Q5CJW5 as seed ortholog is 100%.
Bootstrap support for D3BM88 as seed ortholog is 100%.

Group of orthologs #523. Best score 138 bits
Score difference with first non-orthologous sequence - C.hominis:138 P.pallidum:77

Q5CKF1              	100.00%		D3BT42              	100.00%
                    	       		D3BT43              	87.27%
Bootstrap support for Q5CKF1 as seed ortholog is 100%.
Bootstrap support for D3BT42 as seed ortholog is 99%.

Group of orthologs #524. Best score 138 bits
Score difference with first non-orthologous sequence - C.hominis:138 P.pallidum:138

Q5CKR6              	100.00%		D3BC02              	100.00%
Bootstrap support for Q5CKR6 as seed ortholog is 100%.
Bootstrap support for D3BC02 as seed ortholog is 100%.

Group of orthologs #525. Best score 136 bits
Score difference with first non-orthologous sequence - C.hominis:136 P.pallidum:136

Q5CEL9              	100.00%		D3AYG6              	100.00%
                    	       		D3BQK6              	8.18%
Bootstrap support for Q5CEL9 as seed ortholog is 100%.
Bootstrap support for D3AYG6 as seed ortholog is 100%.

Group of orthologs #526. Best score 136 bits
Score difference with first non-orthologous sequence - C.hominis:136 P.pallidum:136

Q5CN93              	100.00%		D3AVH8              	100.00%
Bootstrap support for Q5CN93 as seed ortholog is 100%.
Bootstrap support for D3AVH8 as seed ortholog is 100%.

Group of orthologs #527. Best score 136 bits
Score difference with first non-orthologous sequence - C.hominis:136 P.pallidum:136

Q5CLX1              	100.00%		D3B062              	100.00%
Bootstrap support for Q5CLX1 as seed ortholog is 100%.
Bootstrap support for D3B062 as seed ortholog is 100%.

Group of orthologs #528. Best score 136 bits
Score difference with first non-orthologous sequence - C.hominis:136 P.pallidum:136

Q5CM85              	100.00%		D3B8I8              	100.00%
Bootstrap support for Q5CM85 as seed ortholog is 100%.
Bootstrap support for D3B8I8 as seed ortholog is 100%.

Group of orthologs #529. Best score 136 bits
Score difference with first non-orthologous sequence - C.hominis:136 P.pallidum:136

Q5CJG2              	100.00%		D3BGW6              	100.00%
Bootstrap support for Q5CJG2 as seed ortholog is 100%.
Bootstrap support for D3BGW6 as seed ortholog is 100%.

Group of orthologs #530. Best score 136 bits
Score difference with first non-orthologous sequence - C.hominis:136 P.pallidum:136

Q5CF70              	100.00%		D3BPU5              	100.00%
Bootstrap support for Q5CF70 as seed ortholog is 100%.
Bootstrap support for D3BPU5 as seed ortholog is 100%.

Group of orthologs #531. Best score 136 bits
Score difference with first non-orthologous sequence - C.hominis:136 P.pallidum:136

Q5CJ00              	100.00%		D3BPC0              	100.00%
Bootstrap support for Q5CJ00 as seed ortholog is 100%.
Bootstrap support for D3BPC0 as seed ortholog is 100%.

Group of orthologs #532. Best score 136 bits
Score difference with first non-orthologous sequence - C.hominis:57 P.pallidum:82

Q5CNZ0              	100.00%		D3BQQ3              	100.00%
Bootstrap support for Q5CNZ0 as seed ortholog is 91%.
Bootstrap support for D3BQQ3 as seed ortholog is 97%.

Group of orthologs #533. Best score 135 bits
Score difference with first non-orthologous sequence - C.hominis:135 P.pallidum:135

Q5CKH0              	100.00%		D3AVN8              	100.00%
Bootstrap support for Q5CKH0 as seed ortholog is 100%.
Bootstrap support for D3AVN8 as seed ortholog is 100%.

Group of orthologs #534. Best score 135 bits
Score difference with first non-orthologous sequence - C.hominis:135 P.pallidum:135

Q5CG49              	100.00%		D3BHL7              	100.00%
Bootstrap support for Q5CG49 as seed ortholog is 100%.
Bootstrap support for D3BHL7 as seed ortholog is 100%.

Group of orthologs #535. Best score 134 bits
Score difference with first non-orthologous sequence - C.hominis:26 P.pallidum:134

Q5CMP5              	100.00%		D3BJM0              	100.00%
                    	       		D3B8N7              	5.68%
                    	       		D3BIP5              	5.17%
Bootstrap support for Q5CMP5 as seed ortholog is 99%.
Bootstrap support for D3BJM0 as seed ortholog is 100%.

Group of orthologs #536. Best score 134 bits
Score difference with first non-orthologous sequence - C.hominis:134 P.pallidum:134

Q5CLC4              	100.00%		D3AY97              	100.00%
Bootstrap support for Q5CLC4 as seed ortholog is 100%.
Bootstrap support for D3AY97 as seed ortholog is 100%.

Group of orthologs #537. Best score 134 bits
Score difference with first non-orthologous sequence - C.hominis:134 P.pallidum:134

Q5CHQ9              	100.00%		D3B9Y5              	100.00%
Bootstrap support for Q5CHQ9 as seed ortholog is 100%.
Bootstrap support for D3B9Y5 as seed ortholog is 100%.

Group of orthologs #538. Best score 134 bits
Score difference with first non-orthologous sequence - C.hominis:134 P.pallidum:134

Q5CNM7              	100.00%		D3BC29              	100.00%
Bootstrap support for Q5CNM7 as seed ortholog is 100%.
Bootstrap support for D3BC29 as seed ortholog is 100%.

Group of orthologs #539. Best score 134 bits
Score difference with first non-orthologous sequence - C.hominis:134 P.pallidum:134

Q5CMJ2              	100.00%		D3BGZ6              	100.00%
Bootstrap support for Q5CMJ2 as seed ortholog is 100%.
Bootstrap support for D3BGZ6 as seed ortholog is 100%.

Group of orthologs #540. Best score 134 bits
Score difference with first non-orthologous sequence - C.hominis:134 P.pallidum:134

Q5CG85              	100.00%		D3BNZ2              	100.00%
Bootstrap support for Q5CG85 as seed ortholog is 100%.
Bootstrap support for D3BNZ2 as seed ortholog is 100%.

Group of orthologs #541. Best score 133 bits
Score difference with first non-orthologous sequence - C.hominis:133 P.pallidum:133

Q5CJ72              	100.00%		D3B0K1              	100.00%
Bootstrap support for Q5CJ72 as seed ortholog is 100%.
Bootstrap support for D3B0K1 as seed ortholog is 100%.

Group of orthologs #542. Best score 133 bits
Score difference with first non-orthologous sequence - C.hominis:133 P.pallidum:133

Q5CJU9              	100.00%		D3B2U9              	100.00%
Bootstrap support for Q5CJU9 as seed ortholog is 100%.
Bootstrap support for D3B2U9 as seed ortholog is 100%.

Group of orthologs #543. Best score 133 bits
Score difference with first non-orthologous sequence - C.hominis:133 P.pallidum:133

Q5CMZ9              	100.00%		D3BPG0              	100.00%
Bootstrap support for Q5CMZ9 as seed ortholog is 100%.
Bootstrap support for D3BPG0 as seed ortholog is 100%.

Group of orthologs #544. Best score 132 bits
Score difference with first non-orthologous sequence - C.hominis:132 P.pallidum:132

Q5CIH6              	100.00%		D3BQQ8              	100.00%
Bootstrap support for Q5CIH6 as seed ortholog is 100%.
Bootstrap support for D3BQQ8 as seed ortholog is 100%.

Group of orthologs #545. Best score 131 bits
Score difference with first non-orthologous sequence - C.hominis:131 P.pallidum:131

Q5CJ59              	100.00%		D3AXV8              	100.00%
Bootstrap support for Q5CJ59 as seed ortholog is 100%.
Bootstrap support for D3AXV8 as seed ortholog is 100%.

Group of orthologs #546. Best score 131 bits
Score difference with first non-orthologous sequence - C.hominis:32 P.pallidum:131

Q5CKH8              	100.00%		D3AXZ9              	100.00%
Bootstrap support for Q5CKH8 as seed ortholog is 67%.
Alternative seed ortholog is Q5CK41 (32 bits away from this cluster)
Bootstrap support for D3AXZ9 as seed ortholog is 100%.

Group of orthologs #547. Best score 131 bits
Score difference with first non-orthologous sequence - C.hominis:131 P.pallidum:131

Q5CJR5              	100.00%		D3B3U3              	100.00%
Bootstrap support for Q5CJR5 as seed ortholog is 100%.
Bootstrap support for D3B3U3 as seed ortholog is 100%.

Group of orthologs #548. Best score 131 bits
Score difference with first non-orthologous sequence - C.hominis:131 P.pallidum:131

Q5CGM9              	100.00%		D3BMH8              	100.00%
Bootstrap support for Q5CGM9 as seed ortholog is 100%.
Bootstrap support for D3BMH8 as seed ortholog is 100%.

Group of orthologs #549. Best score 131 bits
Score difference with first non-orthologous sequence - C.hominis:131 P.pallidum:131

Q5CM54              	100.00%		D3BH46              	100.00%
Bootstrap support for Q5CM54 as seed ortholog is 100%.
Bootstrap support for D3BH46 as seed ortholog is 100%.

Group of orthologs #550. Best score 131 bits
Score difference with first non-orthologous sequence - C.hominis:131 P.pallidum:131

Q5CNC2              	100.00%		D3BTW0              	100.00%
Bootstrap support for Q5CNC2 as seed ortholog is 100%.
Bootstrap support for D3BTW0 as seed ortholog is 100%.

Group of orthologs #551. Best score 130 bits
Score difference with first non-orthologous sequence - C.hominis:130 P.pallidum:130

Q5CL36              	100.00%		D3BAZ9              	100.00%
Bootstrap support for Q5CL36 as seed ortholog is 100%.
Bootstrap support for D3BAZ9 as seed ortholog is 100%.

Group of orthologs #552. Best score 129 bits
Score difference with first non-orthologous sequence - C.hominis:129 P.pallidum:129

Q5CMZ3              	100.00%		D3B2G1              	100.00%
Bootstrap support for Q5CMZ3 as seed ortholog is 100%.
Bootstrap support for D3B2G1 as seed ortholog is 100%.

Group of orthologs #553. Best score 129 bits
Score difference with first non-orthologous sequence - C.hominis:129 P.pallidum:129

Q5CLN5              	100.00%		D3B413              	100.00%
Bootstrap support for Q5CLN5 as seed ortholog is 100%.
Bootstrap support for D3B413 as seed ortholog is 100%.

Group of orthologs #554. Best score 129 bits
Score difference with first non-orthologous sequence - C.hominis:129 P.pallidum:67

Q5CNR1              	100.00%		D3BA68              	100.00%
Bootstrap support for Q5CNR1 as seed ortholog is 100%.
Bootstrap support for D3BA68 as seed ortholog is 97%.

Group of orthologs #555. Best score 129 bits
Score difference with first non-orthologous sequence - C.hominis:129 P.pallidum:129

Q5CJ58              	100.00%		D3BKL0              	100.00%
Bootstrap support for Q5CJ58 as seed ortholog is 100%.
Bootstrap support for D3BKL0 as seed ortholog is 100%.

Group of orthologs #556. Best score 129 bits
Score difference with first non-orthologous sequence - C.hominis:129 P.pallidum:129

Q5CK75              	100.00%		D3BVK2              	100.00%
Bootstrap support for Q5CK75 as seed ortholog is 100%.
Bootstrap support for D3BVK2 as seed ortholog is 100%.

Group of orthologs #557. Best score 128 bits
Score difference with first non-orthologous sequence - C.hominis:128 P.pallidum:128

Q5CG50              	100.00%		D3B8B6              	100.00%
Bootstrap support for Q5CG50 as seed ortholog is 100%.
Bootstrap support for D3B8B6 as seed ortholog is 100%.

Group of orthologs #558. Best score 128 bits
Score difference with first non-orthologous sequence - C.hominis:26 P.pallidum:77

Q5CG12              	100.00%		D3BGY8              	100.00%
Bootstrap support for Q5CG12 as seed ortholog is 88%.
Bootstrap support for D3BGY8 as seed ortholog is 99%.

Group of orthologs #559. Best score 128 bits
Score difference with first non-orthologous sequence - C.hominis:128 P.pallidum:128

Q5CMV4              	100.00%		D3BAC0              	100.00%
Bootstrap support for Q5CMV4 as seed ortholog is 100%.
Bootstrap support for D3BAC0 as seed ortholog is 100%.

Group of orthologs #560. Best score 128 bits
Score difference with first non-orthologous sequence - C.hominis:128 P.pallidum:128

Q5CMV8              	100.00%		D3BTV0              	100.00%
Bootstrap support for Q5CMV8 as seed ortholog is 100%.
Bootstrap support for D3BTV0 as seed ortholog is 100%.

Group of orthologs #561. Best score 127 bits
Score difference with first non-orthologous sequence - C.hominis:58 P.pallidum:127

Q5CIB7              	100.00%		D3B081              	100.00%
Bootstrap support for Q5CIB7 as seed ortholog is 87%.
Bootstrap support for D3B081 as seed ortholog is 100%.

Group of orthologs #562. Best score 127 bits
Score difference with first non-orthologous sequence - C.hominis:127 P.pallidum:127

Q5CKJ1              	100.00%		D3AZY2              	100.00%
Bootstrap support for Q5CKJ1 as seed ortholog is 100%.
Bootstrap support for D3AZY2 as seed ortholog is 100%.

Group of orthologs #563. Best score 127 bits
Score difference with first non-orthologous sequence - C.hominis:127 P.pallidum:127

Q5CHR5              	100.00%		D3BUN5              	100.00%
Bootstrap support for Q5CHR5 as seed ortholog is 100%.
Bootstrap support for D3BUN5 as seed ortholog is 100%.

Group of orthologs #564. Best score 126 bits
Score difference with first non-orthologous sequence - C.hominis:126 P.pallidum:59

Q5CLS7              	100.00%		D3BAI4              	100.00%
                    	       		D3B1J5              	11.28%
Bootstrap support for Q5CLS7 as seed ortholog is 100%.
Bootstrap support for D3BAI4 as seed ortholog is 91%.

Group of orthologs #565. Best score 126 bits
Score difference with first non-orthologous sequence - C.hominis:126 P.pallidum:6

Q5CFL8              	100.00%		D3AYW2              	100.00%
Bootstrap support for Q5CFL8 as seed ortholog is 100%.
Bootstrap support for D3AYW2 as seed ortholog is 54%.
Alternative seed ortholog is D3BQC3 (6 bits away from this cluster)

Group of orthologs #566. Best score 126 bits
Score difference with first non-orthologous sequence - C.hominis:126 P.pallidum:126

Q5CFN0              	100.00%		D3B1Q8              	100.00%
Bootstrap support for Q5CFN0 as seed ortholog is 100%.
Bootstrap support for D3B1Q8 as seed ortholog is 100%.

Group of orthologs #567. Best score 126 bits
Score difference with first non-orthologous sequence - C.hominis:30 P.pallidum:30

Q5CLZ2              	100.00%		D3B8Q0              	100.00%
Bootstrap support for Q5CLZ2 as seed ortholog is 75%.
Bootstrap support for D3B8Q0 as seed ortholog is 72%.
Alternative seed ortholog is D3BUJ8 (30 bits away from this cluster)

Group of orthologs #568. Best score 125 bits
Score difference with first non-orthologous sequence - C.hominis:125 P.pallidum:125

Q5CNG1              	100.00%		D3B205              	100.00%
                    	       		D3B2A7              	50.00%
Bootstrap support for Q5CNG1 as seed ortholog is 100%.
Bootstrap support for D3B205 as seed ortholog is 100%.

Group of orthologs #569. Best score 125 bits
Score difference with first non-orthologous sequence - C.hominis:46 P.pallidum:125

Q5CPA1              	100.00%		D3BCF4              	100.00%
                    	       		D3BUI9              	19.84%
Bootstrap support for Q5CPA1 as seed ortholog is 83%.
Bootstrap support for D3BCF4 as seed ortholog is 100%.

Group of orthologs #570. Best score 125 bits
Score difference with first non-orthologous sequence - C.hominis:125 P.pallidum:125

Q5CI41              	100.00%		D3B9G3              	100.00%
Bootstrap support for Q5CI41 as seed ortholog is 100%.
Bootstrap support for D3B9G3 as seed ortholog is 100%.

Group of orthologs #571. Best score 124 bits
Score difference with first non-orthologous sequence - C.hominis:124 P.pallidum:67

Q5CN10              	100.00%		D3BIM9              	100.00%
                    	       		D3BB15              	51.84%
Bootstrap support for Q5CN10 as seed ortholog is 100%.
Bootstrap support for D3BIM9 as seed ortholog is 98%.

Group of orthologs #572. Best score 124 bits
Score difference with first non-orthologous sequence - C.hominis:124 P.pallidum:124

Q5CJK6              	100.00%		D3AZF8              	100.00%
Bootstrap support for Q5CJK6 as seed ortholog is 100%.
Bootstrap support for D3AZF8 as seed ortholog is 100%.

Group of orthologs #573. Best score 124 bits
Score difference with first non-orthologous sequence - C.hominis:124 P.pallidum:124

Q5CG03              	100.00%		D3BFC2              	100.00%
Bootstrap support for Q5CG03 as seed ortholog is 100%.
Bootstrap support for D3BFC2 as seed ortholog is 100%.

Group of orthologs #574. Best score 124 bits
Score difference with first non-orthologous sequence - C.hominis:124 P.pallidum:124

Q5CKU2              	100.00%		D3BAX9              	100.00%
Bootstrap support for Q5CKU2 as seed ortholog is 100%.
Bootstrap support for D3BAX9 as seed ortholog is 100%.

Group of orthologs #575. Best score 124 bits
Score difference with first non-orthologous sequence - C.hominis:124 P.pallidum:124

Q5CHV9              	100.00%		D3BMH9              	100.00%
Bootstrap support for Q5CHV9 as seed ortholog is 100%.
Bootstrap support for D3BMH9 as seed ortholog is 100%.

Group of orthologs #576. Best score 124 bits
Score difference with first non-orthologous sequence - C.hominis:124 P.pallidum:124

Q5CNA4              	100.00%		D3BM11              	100.00%
Bootstrap support for Q5CNA4 as seed ortholog is 100%.
Bootstrap support for D3BM11 as seed ortholog is 100%.

Group of orthologs #577. Best score 123 bits
Score difference with first non-orthologous sequence - C.hominis:123 P.pallidum:123

Q5CFP8              	100.00%		D3B5S1              	100.00%
Bootstrap support for Q5CFP8 as seed ortholog is 100%.
Bootstrap support for D3B5S1 as seed ortholog is 100%.

Group of orthologs #578. Best score 123 bits
Score difference with first non-orthologous sequence - C.hominis:123 P.pallidum:123

Q5CN95              	100.00%		D3B010              	100.00%
Bootstrap support for Q5CN95 as seed ortholog is 100%.
Bootstrap support for D3B010 as seed ortholog is 100%.

Group of orthologs #579. Best score 123 bits
Score difference with first non-orthologous sequence - C.hominis:123 P.pallidum:123

Q5CNY3              	100.00%		D3B6U5              	100.00%
Bootstrap support for Q5CNY3 as seed ortholog is 100%.
Bootstrap support for D3B6U5 as seed ortholog is 100%.

Group of orthologs #580. Best score 123 bits
Score difference with first non-orthologous sequence - C.hominis:123 P.pallidum:62

Q5CEU1              	100.00%		D3BHM0              	100.00%
Bootstrap support for Q5CEU1 as seed ortholog is 100%.
Bootstrap support for D3BHM0 as seed ortholog is 91%.

Group of orthologs #581. Best score 123 bits
Score difference with first non-orthologous sequence - C.hominis:67 P.pallidum:22

Q5CM23              	100.00%		D3BAK7              	100.00%
Bootstrap support for Q5CM23 as seed ortholog is 95%.
Bootstrap support for D3BAK7 as seed ortholog is 70%.
Alternative seed ortholog is D3BC17 (22 bits away from this cluster)

Group of orthologs #582. Best score 123 bits
Score difference with first non-orthologous sequence - C.hominis:123 P.pallidum:123

Q5CNP1              	100.00%		D3BCX0              	100.00%
Bootstrap support for Q5CNP1 as seed ortholog is 100%.
Bootstrap support for D3BCX0 as seed ortholog is 100%.

Group of orthologs #583. Best score 123 bits
Score difference with first non-orthologous sequence - C.hominis:123 P.pallidum:123

Q5CKI1              	100.00%		D3BTV9              	100.00%
Bootstrap support for Q5CKI1 as seed ortholog is 100%.
Bootstrap support for D3BTV9 as seed ortholog is 100%.

Group of orthologs #584. Best score 122 bits
Score difference with first non-orthologous sequence - C.hominis:122 P.pallidum:122

Q5CI28              	100.00%		D3BGB9              	100.00%
Bootstrap support for Q5CI28 as seed ortholog is 100%.
Bootstrap support for D3BGB9 as seed ortholog is 100%.

Group of orthologs #585. Best score 121 bits
Score difference with first non-orthologous sequence - C.hominis:59 P.pallidum:51

Q5CH58              	100.00%		D3BCG7              	100.00%
                    	       		D3BI78              	11.34%
Bootstrap support for Q5CH58 as seed ortholog is 99%.
Bootstrap support for D3BCG7 as seed ortholog is 99%.

Group of orthologs #586. Best score 121 bits
Score difference with first non-orthologous sequence - C.hominis:121 P.pallidum:74

Q5CKR9              	100.00%		D3AWE0              	100.00%
Bootstrap support for Q5CKR9 as seed ortholog is 100%.
Bootstrap support for D3AWE0 as seed ortholog is 100%.

Group of orthologs #587. Best score 121 bits
Score difference with first non-orthologous sequence - C.hominis:121 P.pallidum:121

Q5CHC6              	100.00%		D3B4X6              	100.00%
Bootstrap support for Q5CHC6 as seed ortholog is 100%.
Bootstrap support for D3B4X6 as seed ortholog is 100%.

Group of orthologs #588. Best score 121 bits
Score difference with first non-orthologous sequence - C.hominis:121 P.pallidum:121

Q5CKC0              	100.00%		D3B6N8              	100.00%
Bootstrap support for Q5CKC0 as seed ortholog is 100%.
Bootstrap support for D3B6N8 as seed ortholog is 100%.

Group of orthologs #589. Best score 121 bits
Score difference with first non-orthologous sequence - C.hominis:121 P.pallidum:121

Q5CEA6              	100.00%		D3BM86              	100.00%
Bootstrap support for Q5CEA6 as seed ortholog is 100%.
Bootstrap support for D3BM86 as seed ortholog is 100%.

Group of orthologs #590. Best score 120 bits
Score difference with first non-orthologous sequence - C.hominis:120 P.pallidum:28

Q5CHH1              	100.00%		D3B2S2              	100.00%
                    	       		D3AZ81              	5.06%
Bootstrap support for Q5CHH1 as seed ortholog is 100%.
Bootstrap support for D3B2S2 as seed ortholog is 76%.

Group of orthologs #591. Best score 119 bits
Score difference with first non-orthologous sequence - C.hominis:38 P.pallidum:119

Q5CKL6              	100.00%		D3BS60              	100.00%
                    	       		D3BHG8              	15.98%
                    	       		D3B2D7              	5.53%
Bootstrap support for Q5CKL6 as seed ortholog is 82%.
Bootstrap support for D3BS60 as seed ortholog is 100%.

Group of orthologs #592. Best score 119 bits
Score difference with first non-orthologous sequence - C.hominis:57 P.pallidum:119

Q5CMN3              	100.00%		D3BQ72              	100.00%
                    	       		D3B9K5              	34.11%
                    	       		D3BL18              	5.26%
Bootstrap support for Q5CMN3 as seed ortholog is 95%.
Bootstrap support for D3BQ72 as seed ortholog is 100%.

Group of orthologs #593. Best score 119 bits
Score difference with first non-orthologous sequence - C.hominis:119 P.pallidum:119

Q5CHS4              	100.00%		D3B571              	100.00%
                    	       		D3BV09              	19.97%
Bootstrap support for Q5CHS4 as seed ortholog is 100%.
Bootstrap support for D3B571 as seed ortholog is 100%.

Group of orthologs #594. Best score 119 bits
Score difference with first non-orthologous sequence - C.hominis:119 P.pallidum:119

Q5CMX1              	100.00%		D3B3B6              	100.00%
Bootstrap support for Q5CMX1 as seed ortholog is 100%.
Bootstrap support for D3B3B6 as seed ortholog is 100%.

Group of orthologs #595. Best score 119 bits
Score difference with first non-orthologous sequence - C.hominis:119 P.pallidum:119

Q5CFW0              	100.00%		D3BD80              	100.00%
Bootstrap support for Q5CFW0 as seed ortholog is 100%.
Bootstrap support for D3BD80 as seed ortholog is 100%.

Group of orthologs #596. Best score 119 bits
Score difference with first non-orthologous sequence - C.hominis:119 P.pallidum:119

Q5CME7              	100.00%		D3BC06              	100.00%
Bootstrap support for Q5CME7 as seed ortholog is 100%.
Bootstrap support for D3BC06 as seed ortholog is 100%.

Group of orthologs #597. Best score 119 bits
Score difference with first non-orthologous sequence - C.hominis:119 P.pallidum:119

Q5CLS0              	100.00%		D3BIR5              	100.00%
Bootstrap support for Q5CLS0 as seed ortholog is 100%.
Bootstrap support for D3BIR5 as seed ortholog is 100%.

Group of orthologs #598. Best score 119 bits
Score difference with first non-orthologous sequence - C.hominis:119 P.pallidum:119

Q5CJ80              	100.00%		D3BRD6              	100.00%
Bootstrap support for Q5CJ80 as seed ortholog is 100%.
Bootstrap support for D3BRD6 as seed ortholog is 100%.

Group of orthologs #599. Best score 119 bits
Score difference with first non-orthologous sequence - C.hominis:119 P.pallidum:69

Q5CN41              	100.00%		D3BSQ1              	100.00%
Bootstrap support for Q5CN41 as seed ortholog is 100%.
Bootstrap support for D3BSQ1 as seed ortholog is 99%.

Group of orthologs #600. Best score 118 bits
Score difference with first non-orthologous sequence - C.hominis:118 P.pallidum:118

Q5CJN2              	100.00%		D3B477              	100.00%
Bootstrap support for Q5CJN2 as seed ortholog is 100%.
Bootstrap support for D3B477 as seed ortholog is 100%.

Group of orthologs #601. Best score 118 bits
Score difference with first non-orthologous sequence - C.hominis:118 P.pallidum:118

Q5CP58              	100.00%		D3B790              	100.00%
Bootstrap support for Q5CP58 as seed ortholog is 100%.
Bootstrap support for D3B790 as seed ortholog is 100%.

Group of orthologs #602. Best score 118 bits
Score difference with first non-orthologous sequence - C.hominis:118 P.pallidum:118

Q5CE02              	100.00%		D3BK19              	100.00%
Bootstrap support for Q5CE02 as seed ortholog is 100%.
Bootstrap support for D3BK19 as seed ortholog is 100%.

Group of orthologs #603. Best score 118 bits
Score difference with first non-orthologous sequence - C.hominis:41 P.pallidum:7

Q5CNY5              	100.00%		D3BNF1              	100.00%
Bootstrap support for Q5CNY5 as seed ortholog is 92%.
Bootstrap support for D3BNF1 as seed ortholog is 61%.
Alternative seed ortholog is D3BRH7 (7 bits away from this cluster)

Group of orthologs #604. Best score 117 bits
Score difference with first non-orthologous sequence - C.hominis:117 P.pallidum:117

Q5CJQ1              	100.00%		D3AYE2              	100.00%
Bootstrap support for Q5CJQ1 as seed ortholog is 100%.
Bootstrap support for D3AYE2 as seed ortholog is 100%.

Group of orthologs #605. Best score 117 bits
Score difference with first non-orthologous sequence - C.hominis:117 P.pallidum:117

Q5CLN1              	100.00%		D3AZG4              	100.00%
Bootstrap support for Q5CLN1 as seed ortholog is 100%.
Bootstrap support for D3AZG4 as seed ortholog is 100%.

Group of orthologs #606. Best score 117 bits
Score difference with first non-orthologous sequence - C.hominis:117 P.pallidum:117

Q5CN34              	100.00%		D3BPE8              	100.00%
Bootstrap support for Q5CN34 as seed ortholog is 100%.
Bootstrap support for D3BPE8 as seed ortholog is 100%.

Group of orthologs #607. Best score 117 bits
Score difference with first non-orthologous sequence - C.hominis:117 P.pallidum:117

Q5CLR1              	100.00%		D3BU56              	100.00%
Bootstrap support for Q5CLR1 as seed ortholog is 100%.
Bootstrap support for D3BU56 as seed ortholog is 100%.

Group of orthologs #608. Best score 116 bits
Score difference with first non-orthologous sequence - C.hominis:116 P.pallidum:116

Q5CK50              	100.00%		D3BTD4              	100.00%
Bootstrap support for Q5CK50 as seed ortholog is 100%.
Bootstrap support for D3BTD4 as seed ortholog is 100%.

Group of orthologs #609. Best score 115 bits
Score difference with first non-orthologous sequence - C.hominis:115 P.pallidum:115

Q5CFV2              	100.00%		D3BQ01              	100.00%
Bootstrap support for Q5CFV2 as seed ortholog is 100%.
Bootstrap support for D3BQ01 as seed ortholog is 100%.

Group of orthologs #610. Best score 114 bits
Score difference with first non-orthologous sequence - C.hominis:114 P.pallidum:114

Q5CLL2              	100.00%		D3BI13              	100.00%
Bootstrap support for Q5CLL2 as seed ortholog is 100%.
Bootstrap support for D3BI13 as seed ortholog is 100%.

Group of orthologs #611. Best score 114 bits
Score difference with first non-orthologous sequence - C.hominis:114 P.pallidum:47

Q5CKK9              	100.00%		D3BTM8              	100.00%
Bootstrap support for Q5CKK9 as seed ortholog is 100%.
Bootstrap support for D3BTM8 as seed ortholog is 99%.

Group of orthologs #612. Best score 113 bits
Score difference with first non-orthologous sequence - C.hominis:113 P.pallidum:113

Q5CH48              	100.00%		D3AXJ7              	100.00%
Q5CM04              	6.90%		
Bootstrap support for Q5CH48 as seed ortholog is 100%.
Bootstrap support for D3AXJ7 as seed ortholog is 100%.

Group of orthologs #613. Best score 113 bits
Score difference with first non-orthologous sequence - C.hominis:31 P.pallidum:48

Q5CMT1              	100.00%		D3AVN2              	100.00%
                    	       		D3BRJ2              	6.18%
Bootstrap support for Q5CMT1 as seed ortholog is 79%.
Bootstrap support for D3AVN2 as seed ortholog is 89%.

Group of orthologs #614. Best score 113 bits
Score difference with first non-orthologous sequence - C.hominis:113 P.pallidum:113

Q5CI23              	100.00%		D3BLG3              	100.00%
Bootstrap support for Q5CI23 as seed ortholog is 100%.
Bootstrap support for D3BLG3 as seed ortholog is 100%.

Group of orthologs #615. Best score 113 bits
Score difference with first non-orthologous sequence - C.hominis:113 P.pallidum:113

Q5CK86              	100.00%		D3BK44              	100.00%
Bootstrap support for Q5CK86 as seed ortholog is 100%.
Bootstrap support for D3BK44 as seed ortholog is 100%.

Group of orthologs #616. Best score 113 bits
Score difference with first non-orthologous sequence - C.hominis:113 P.pallidum:113

Q5CNV1              	100.00%		D3BUG2              	100.00%
Bootstrap support for Q5CNV1 as seed ortholog is 100%.
Bootstrap support for D3BUG2 as seed ortholog is 100%.

Group of orthologs #617. Best score 112 bits
Score difference with first non-orthologous sequence - C.hominis:112 P.pallidum:112

Q5CHX7              	100.00%		D3B963              	100.00%
Bootstrap support for Q5CHX7 as seed ortholog is 100%.
Bootstrap support for D3B963 as seed ortholog is 100%.

Group of orthologs #618. Best score 112 bits
Score difference with first non-orthologous sequence - C.hominis:112 P.pallidum:112

Q5CIG3              	100.00%		D3BB72              	100.00%
Bootstrap support for Q5CIG3 as seed ortholog is 100%.
Bootstrap support for D3BB72 as seed ortholog is 100%.

Group of orthologs #619. Best score 112 bits
Score difference with first non-orthologous sequence - C.hominis:112 P.pallidum:112

Q5CMF0              	100.00%		D3B8S5              	100.00%
Bootstrap support for Q5CMF0 as seed ortholog is 100%.
Bootstrap support for D3B8S5 as seed ortholog is 100%.

Group of orthologs #620. Best score 112 bits
Score difference with first non-orthologous sequence - C.hominis:112 P.pallidum:112

Q5CP68              	100.00%		D3BB06              	100.00%
Bootstrap support for Q5CP68 as seed ortholog is 100%.
Bootstrap support for D3BB06 as seed ortholog is 100%.

Group of orthologs #621. Best score 112 bits
Score difference with first non-orthologous sequence - C.hominis:112 P.pallidum:112

Q5CKH7              	100.00%		D3BKU0              	100.00%
Bootstrap support for Q5CKH7 as seed ortholog is 100%.
Bootstrap support for D3BKU0 as seed ortholog is 100%.

Group of orthologs #622. Best score 111 bits
Score difference with first non-orthologous sequence - C.hominis:111 P.pallidum:111

Q5CJD2              	100.00%		D3AZW3              	100.00%
Bootstrap support for Q5CJD2 as seed ortholog is 100%.
Bootstrap support for D3AZW3 as seed ortholog is 100%.

Group of orthologs #623. Best score 111 bits
Score difference with first non-orthologous sequence - C.hominis:111 P.pallidum:111

Q5CGX1              	100.00%		D3B2K3              	100.00%
Bootstrap support for Q5CGX1 as seed ortholog is 100%.
Bootstrap support for D3B2K3 as seed ortholog is 100%.

Group of orthologs #624. Best score 111 bits
Score difference with first non-orthologous sequence - C.hominis:111 P.pallidum:111

Q5CLF0              	100.00%		D3BGE0              	100.00%
Bootstrap support for Q5CLF0 as seed ortholog is 100%.
Bootstrap support for D3BGE0 as seed ortholog is 100%.

Group of orthologs #625. Best score 111 bits
Score difference with first non-orthologous sequence - C.hominis:111 P.pallidum:111

Q5CIG8              	100.00%		D3BL94              	100.00%
Bootstrap support for Q5CIG8 as seed ortholog is 100%.
Bootstrap support for D3BL94 as seed ortholog is 100%.

Group of orthologs #626. Best score 110 bits
Score difference with first non-orthologous sequence - C.hominis:110 P.pallidum:110

Q5CPC8              	100.00%		D3AXS4              	100.00%
                    	       		D3BT90              	26.03%
Bootstrap support for Q5CPC8 as seed ortholog is 100%.
Bootstrap support for D3AXS4 as seed ortholog is 100%.

Group of orthologs #627. Best score 110 bits
Score difference with first non-orthologous sequence - C.hominis:110 P.pallidum:110

Q5CGR2              	100.00%		D3AYA9              	100.00%
Bootstrap support for Q5CGR2 as seed ortholog is 100%.
Bootstrap support for D3AYA9 as seed ortholog is 100%.

Group of orthologs #628. Best score 110 bits
Score difference with first non-orthologous sequence - C.hominis:110 P.pallidum:110

Q5CKZ9              	100.00%		D3AZW6              	100.00%
Bootstrap support for Q5CKZ9 as seed ortholog is 100%.
Bootstrap support for D3AZW6 as seed ortholog is 100%.

Group of orthologs #629. Best score 110 bits
Score difference with first non-orthologous sequence - C.hominis:110 P.pallidum:110

Q5CF67              	100.00%		D3BTJ5              	100.00%
Bootstrap support for Q5CF67 as seed ortholog is 100%.
Bootstrap support for D3BTJ5 as seed ortholog is 100%.

Group of orthologs #630. Best score 109 bits
Score difference with first non-orthologous sequence - C.hominis:44 P.pallidum:109

Q5CFH7              	100.00%		D3AZF9              	100.00%
Bootstrap support for Q5CFH7 as seed ortholog is 90%.
Bootstrap support for D3AZF9 as seed ortholog is 100%.

Group of orthologs #631. Best score 109 bits
Score difference with first non-orthologous sequence - C.hominis:109 P.pallidum:109

Q5CIT4              	100.00%		D3B567              	100.00%
Bootstrap support for Q5CIT4 as seed ortholog is 100%.
Bootstrap support for D3B567 as seed ortholog is 100%.

Group of orthologs #632. Best score 109 bits
Score difference with first non-orthologous sequence - C.hominis:109 P.pallidum:109

Q5CNP2              	100.00%		D3B4Y2              	100.00%
Bootstrap support for Q5CNP2 as seed ortholog is 100%.
Bootstrap support for D3B4Y2 as seed ortholog is 100%.

Group of orthologs #633. Best score 108 bits
Score difference with first non-orthologous sequence - C.hominis:108 P.pallidum:108

Q5CFB4              	100.00%		D3B3Z8              	100.00%
Bootstrap support for Q5CFB4 as seed ortholog is 100%.
Bootstrap support for D3B3Z8 as seed ortholog is 100%.

Group of orthologs #634. Best score 108 bits
Score difference with first non-orthologous sequence - C.hominis:108 P.pallidum:28

Q5CMZ5              	100.00%		D3B3P3              	100.00%
Bootstrap support for Q5CMZ5 as seed ortholog is 100%.
Bootstrap support for D3B3P3 as seed ortholog is 79%.

Group of orthologs #635. Best score 108 bits
Score difference with first non-orthologous sequence - C.hominis:108 P.pallidum:108

Q5CHT1              	100.00%		D3BEM0              	100.00%
Bootstrap support for Q5CHT1 as seed ortholog is 100%.
Bootstrap support for D3BEM0 as seed ortholog is 100%.

Group of orthologs #636. Best score 108 bits
Score difference with first non-orthologous sequence - C.hominis:108 P.pallidum:108

Q5CN25              	100.00%		D3BC65              	100.00%
Bootstrap support for Q5CN25 as seed ortholog is 100%.
Bootstrap support for D3BC65 as seed ortholog is 100%.

Group of orthologs #637. Best score 108 bits
Score difference with first non-orthologous sequence - C.hominis:108 P.pallidum:108

Q5CKH5              	100.00%		D3BIL3              	100.00%
Bootstrap support for Q5CKH5 as seed ortholog is 100%.
Bootstrap support for D3BIL3 as seed ortholog is 100%.

Group of orthologs #638. Best score 107 bits
Score difference with first non-orthologous sequence - C.hominis:107 P.pallidum:107

Q5CG63              	100.00%		D3AYD2              	100.00%
                    	       		D3B3W3              	6.33%
Bootstrap support for Q5CG63 as seed ortholog is 100%.
Bootstrap support for D3AYD2 as seed ortholog is 100%.

Group of orthologs #639. Best score 107 bits
Score difference with first non-orthologous sequence - C.hominis:107 P.pallidum:20

Q5CJM1              	100.00%		D3BJZ1              	100.00%
                    	       		D3BH57              	43.43%
Bootstrap support for Q5CJM1 as seed ortholog is 100%.
Bootstrap support for D3BJZ1 as seed ortholog is 61%.
Alternative seed ortholog is D3BB55 (20 bits away from this cluster)

Group of orthologs #640. Best score 107 bits
Score difference with first non-orthologous sequence - C.hominis:107 P.pallidum:107

Q5CND7              	100.00%		D3BHM5              	100.00%
Bootstrap support for Q5CND7 as seed ortholog is 100%.
Bootstrap support for D3BHM5 as seed ortholog is 100%.

Group of orthologs #641. Best score 106 bits
Score difference with first non-orthologous sequence - C.hominis:106 P.pallidum:106

Q5CIU4              	100.00%		D3B540              	100.00%
Bootstrap support for Q5CIU4 as seed ortholog is 100%.
Bootstrap support for D3B540 as seed ortholog is 100%.

Group of orthologs #642. Best score 106 bits
Score difference with first non-orthologous sequence - C.hominis:106 P.pallidum:106

Q5CFR0              	100.00%		D3BGP9              	100.00%
Bootstrap support for Q5CFR0 as seed ortholog is 100%.
Bootstrap support for D3BGP9 as seed ortholog is 100%.

Group of orthologs #643. Best score 105 bits
Score difference with first non-orthologous sequence - C.hominis:105 P.pallidum:105

Q5CEU4              	100.00%		D3BEK8              	100.00%
Bootstrap support for Q5CEU4 as seed ortholog is 100%.
Bootstrap support for D3BEK8 as seed ortholog is 100%.

Group of orthologs #644. Best score 105 bits
Score difference with first non-orthologous sequence - C.hominis:105 P.pallidum:105

Q5CKM1              	100.00%		D3BCJ7              	100.00%
Bootstrap support for Q5CKM1 as seed ortholog is 100%.
Bootstrap support for D3BCJ7 as seed ortholog is 100%.

Group of orthologs #645. Best score 105 bits
Score difference with first non-orthologous sequence - C.hominis:105 P.pallidum:105

Q5CHE5              	100.00%		D3BG94              	100.00%
Bootstrap support for Q5CHE5 as seed ortholog is 100%.
Bootstrap support for D3BG94 as seed ortholog is 100%.

Group of orthologs #646. Best score 105 bits
Score difference with first non-orthologous sequence - C.hominis:105 P.pallidum:105

Q5CF16              	100.00%		D3BUI7              	100.00%
Bootstrap support for Q5CF16 as seed ortholog is 100%.
Bootstrap support for D3BUI7 as seed ortholog is 100%.

Group of orthologs #647. Best score 105 bits
Score difference with first non-orthologous sequence - C.hominis:105 P.pallidum:13

Q5CJP7              	100.00%		D3BT02              	100.00%
Bootstrap support for Q5CJP7 as seed ortholog is 100%.
Bootstrap support for D3BT02 as seed ortholog is 56%.
Alternative seed ortholog is D3B0X2 (13 bits away from this cluster)

Group of orthologs #648. Best score 104 bits
Score difference with first non-orthologous sequence - C.hominis:104 P.pallidum:104

Q5CHR9              	100.00%		D3AX52              	100.00%
Bootstrap support for Q5CHR9 as seed ortholog is 100%.
Bootstrap support for D3AX52 as seed ortholog is 100%.

Group of orthologs #649. Best score 104 bits
Score difference with first non-orthologous sequence - C.hominis:104 P.pallidum:104

Q5CJ11              	100.00%		D3B6V9              	100.00%
Bootstrap support for Q5CJ11 as seed ortholog is 100%.
Bootstrap support for D3B6V9 as seed ortholog is 100%.

Group of orthologs #650. Best score 104 bits
Score difference with first non-orthologous sequence - C.hominis:104 P.pallidum:104

Q5CFS8              	100.00%		D3BEN2              	100.00%
Bootstrap support for Q5CFS8 as seed ortholog is 100%.
Bootstrap support for D3BEN2 as seed ortholog is 100%.

Group of orthologs #651. Best score 104 bits
Score difference with first non-orthologous sequence - C.hominis:104 P.pallidum:104

Q5CP28              	100.00%		D3BP72              	100.00%
Bootstrap support for Q5CP28 as seed ortholog is 100%.
Bootstrap support for D3BP72 as seed ortholog is 100%.

Group of orthologs #652. Best score 104 bits
Score difference with first non-orthologous sequence - C.hominis:104 P.pallidum:104

Q5CME6              	100.00%		D3BVL7              	100.00%
Bootstrap support for Q5CME6 as seed ortholog is 100%.
Bootstrap support for D3BVL7 as seed ortholog is 100%.

Group of orthologs #653. Best score 103 bits
Score difference with first non-orthologous sequence - C.hominis:103 P.pallidum:103

Q5CEA1              	100.00%		D3B7E8              	100.00%
Bootstrap support for Q5CEA1 as seed ortholog is 100%.
Bootstrap support for D3B7E8 as seed ortholog is 100%.

Group of orthologs #654. Best score 103 bits
Score difference with first non-orthologous sequence - C.hominis:103 P.pallidum:103

Q5CLZ8              	100.00%		D3BAT8              	100.00%
Bootstrap support for Q5CLZ8 as seed ortholog is 100%.
Bootstrap support for D3BAT8 as seed ortholog is 100%.

Group of orthologs #655. Best score 102 bits
Score difference with first non-orthologous sequence - C.hominis:16 P.pallidum:102

Q5CI55              	100.00%		D3BT30              	100.00%
                    	       		D3BPU7              	17.00%
Bootstrap support for Q5CI55 as seed ortholog is 92%.
Bootstrap support for D3BT30 as seed ortholog is 100%.

Group of orthologs #656. Best score 102 bits
Score difference with first non-orthologous sequence - C.hominis:102 P.pallidum:102

Q5CG96              	100.00%		D3AW79              	100.00%
Bootstrap support for Q5CG96 as seed ortholog is 100%.
Bootstrap support for D3AW79 as seed ortholog is 100%.

Group of orthologs #657. Best score 102 bits
Score difference with first non-orthologous sequence - C.hominis:102 P.pallidum:102

Q5CGC6              	100.00%		D3BUT5              	100.00%
Bootstrap support for Q5CGC6 as seed ortholog is 100%.
Bootstrap support for D3BUT5 as seed ortholog is 100%.

Group of orthologs #658. Best score 101 bits
Score difference with first non-orthologous sequence - C.hominis:101 P.pallidum:101

Q5CFY4              	100.00%		D3BBB0              	100.00%
Bootstrap support for Q5CFY4 as seed ortholog is 100%.
Bootstrap support for D3BBB0 as seed ortholog is 100%.

Group of orthologs #659. Best score 101 bits
Score difference with first non-orthologous sequence - C.hominis:101 P.pallidum:101

Q5CNT5              	100.00%		D3B583              	100.00%
Bootstrap support for Q5CNT5 as seed ortholog is 100%.
Bootstrap support for D3B583 as seed ortholog is 100%.

Group of orthologs #660. Best score 101 bits
Score difference with first non-orthologous sequence - C.hominis:101 P.pallidum:101

Q5CJP5              	100.00%		D3BDZ0              	100.00%
Bootstrap support for Q5CJP5 as seed ortholog is 100%.
Bootstrap support for D3BDZ0 as seed ortholog is 100%.

Group of orthologs #661. Best score 101 bits
Score difference with first non-orthologous sequence - C.hominis:101 P.pallidum:101

Q5CG38              	100.00%		D3BN55              	100.00%
Bootstrap support for Q5CG38 as seed ortholog is 100%.
Bootstrap support for D3BN55 as seed ortholog is 100%.

Group of orthologs #662. Best score 100 bits
Score difference with first non-orthologous sequence - C.hominis:100 P.pallidum:37

Q5CHS9              	100.00%		D3AX98              	100.00%
                    	       		D3AYE1              	10.00%
Bootstrap support for Q5CHS9 as seed ortholog is 100%.
Bootstrap support for D3AX98 as seed ortholog is 97%.

Group of orthologs #663. Best score 100 bits
Score difference with first non-orthologous sequence - C.hominis:100 P.pallidum:100

Q5CLN8              	100.00%		D3AVG4              	100.00%
                    	       		D3BBA6              	57.45%
Bootstrap support for Q5CLN8 as seed ortholog is 100%.
Bootstrap support for D3AVG4 as seed ortholog is 100%.

Group of orthologs #664. Best score 100 bits
Score difference with first non-orthologous sequence - C.hominis:100 P.pallidum:100

Q5CNF3              	100.00%		D3AW72              	100.00%
                    	       		D3BGW7              	5.35%
Bootstrap support for Q5CNF3 as seed ortholog is 100%.
Bootstrap support for D3AW72 as seed ortholog is 100%.

Group of orthologs #665. Best score 100 bits
Score difference with first non-orthologous sequence - C.hominis:100 P.pallidum:100

Q5CFA5              	100.00%		D3B3D8              	100.00%
Bootstrap support for Q5CFA5 as seed ortholog is 100%.
Bootstrap support for D3B3D8 as seed ortholog is 100%.

Group of orthologs #666. Best score 100 bits
Score difference with first non-orthologous sequence - C.hominis:100 P.pallidum:100

Q5CL96              	100.00%		D3BCE7              	100.00%
Bootstrap support for Q5CL96 as seed ortholog is 100%.
Bootstrap support for D3BCE7 as seed ortholog is 100%.

Group of orthologs #667. Best score 100 bits
Score difference with first non-orthologous sequence - C.hominis:100 P.pallidum:100

Q5CI20              	100.00%		D3BHB8              	100.00%
Bootstrap support for Q5CI20 as seed ortholog is 100%.
Bootstrap support for D3BHB8 as seed ortholog is 100%.

Group of orthologs #668. Best score 99 bits
Score difference with first non-orthologous sequence - C.hominis:99 P.pallidum:99

Q5CN39              	100.00%		D3BC73              	100.00%
                    	       		D3B509              	9.59%
Bootstrap support for Q5CN39 as seed ortholog is 100%.
Bootstrap support for D3BC73 as seed ortholog is 100%.

Group of orthologs #669. Best score 99 bits
Score difference with first non-orthologous sequence - C.hominis:99 P.pallidum:99

Q5CMB0              	100.00%		D3B0J1              	100.00%
Bootstrap support for Q5CMB0 as seed ortholog is 100%.
Bootstrap support for D3B0J1 as seed ortholog is 100%.

Group of orthologs #670. Best score 99 bits
Score difference with first non-orthologous sequence - C.hominis:99 P.pallidum:32

Q5CG37              	100.00%		D3BK56              	100.00%
Bootstrap support for Q5CG37 as seed ortholog is 100%.
Bootstrap support for D3BK56 as seed ortholog is 87%.

Group of orthologs #671. Best score 98 bits
Score difference with first non-orthologous sequence - C.hominis:98 P.pallidum:98

Q5CH23              	100.00%		D3BV55              	100.00%
Bootstrap support for Q5CH23 as seed ortholog is 100%.
Bootstrap support for D3BV55 as seed ortholog is 100%.

Group of orthologs #672. Best score 97 bits
Score difference with first non-orthologous sequence - C.hominis:97 P.pallidum:97

Q5CJQ7              	100.00%		D3B217              	100.00%
                    	       		D3BHE7              	10.40%
                    	       		D3B5L0              	8.44%
Bootstrap support for Q5CJQ7 as seed ortholog is 100%.
Bootstrap support for D3B217 as seed ortholog is 100%.

Group of orthologs #673. Best score 97 bits
Score difference with first non-orthologous sequence - C.hominis:97 P.pallidum:97

Q5CKM5              	100.00%		D3B528              	100.00%
                    	       		D3BL25              	13.01%
                    	       		D3BES8              	11.73%
Bootstrap support for Q5CKM5 as seed ortholog is 100%.
Bootstrap support for D3B528 as seed ortholog is 100%.

Group of orthologs #674. Best score 97 bits
Score difference with first non-orthologous sequence - C.hominis:97 P.pallidum:97

Q5CNX9              	100.00%		D3B429              	100.00%
Bootstrap support for Q5CNX9 as seed ortholog is 100%.
Bootstrap support for D3B429 as seed ortholog is 100%.

Group of orthologs #675. Best score 97 bits
Score difference with first non-orthologous sequence - C.hominis:97 P.pallidum:97

Q5CK48              	100.00%		D3BE05              	100.00%
Bootstrap support for Q5CK48 as seed ortholog is 100%.
Bootstrap support for D3BE05 as seed ortholog is 100%.

Group of orthologs #676. Best score 97 bits
Score difference with first non-orthologous sequence - C.hominis:97 P.pallidum:97

Q5CIH1              	100.00%		D3BJY8              	100.00%
Bootstrap support for Q5CIH1 as seed ortholog is 100%.
Bootstrap support for D3BJY8 as seed ortholog is 100%.

Group of orthologs #677. Best score 97 bits
Score difference with first non-orthologous sequence - C.hominis:97 P.pallidum:27

Q5CK85              	100.00%		D3BJU9              	100.00%
Bootstrap support for Q5CK85 as seed ortholog is 100%.
Bootstrap support for D3BJU9 as seed ortholog is 77%.

Group of orthologs #678. Best score 97 bits
Score difference with first non-orthologous sequence - C.hominis:97 P.pallidum:97

Q5CMR3              	100.00%		D3BM59              	100.00%
Bootstrap support for Q5CMR3 as seed ortholog is 100%.
Bootstrap support for D3BM59 as seed ortholog is 100%.

Group of orthologs #679. Best score 97 bits
Score difference with first non-orthologous sequence - C.hominis:97 P.pallidum:97

Q5CHC8              	100.00%		D3BTU3              	100.00%
Bootstrap support for Q5CHC8 as seed ortholog is 100%.
Bootstrap support for D3BTU3 as seed ortholog is 100%.

Group of orthologs #680. Best score 96 bits
Score difference with first non-orthologous sequence - C.hominis:96 P.pallidum:24

Q5CK67              	100.00%		D3B1H0              	100.00%
                    	       		D3AWT6              	5.06%
Bootstrap support for Q5CK67 as seed ortholog is 100%.
Bootstrap support for D3B1H0 as seed ortholog is 69%.
Alternative seed ortholog is D3B238 (24 bits away from this cluster)

Group of orthologs #681. Best score 96 bits
Score difference with first non-orthologous sequence - C.hominis:96 P.pallidum:96

Q5CM69              	100.00%		D3BF34              	100.00%
Bootstrap support for Q5CM69 as seed ortholog is 100%.
Bootstrap support for D3BF34 as seed ortholog is 100%.

Group of orthologs #682. Best score 96 bits
Score difference with first non-orthologous sequence - C.hominis:96 P.pallidum:54

Q5CID1              	100.00%		D3BM19              	100.00%
Bootstrap support for Q5CID1 as seed ortholog is 100%.
Bootstrap support for D3BM19 as seed ortholog is 94%.

Group of orthologs #683. Best score 96 bits
Score difference with first non-orthologous sequence - C.hominis:96 P.pallidum:96

Q5CLW4              	100.00%		D3BP66              	100.00%
Bootstrap support for Q5CLW4 as seed ortholog is 100%.
Bootstrap support for D3BP66 as seed ortholog is 100%.

Group of orthologs #684. Best score 96 bits
Score difference with first non-orthologous sequence - C.hominis:96 P.pallidum:96

Q5CLR9              	100.00%		D3BUI8              	100.00%
Bootstrap support for Q5CLR9 as seed ortholog is 100%.
Bootstrap support for D3BUI8 as seed ortholog is 100%.

Group of orthologs #685. Best score 95 bits
Score difference with first non-orthologous sequence - C.hominis:95 P.pallidum:95

Q5CHM8              	100.00%		D3B201              	100.00%
                    	       		D3BPA0              	14.38%
Bootstrap support for Q5CHM8 as seed ortholog is 100%.
Bootstrap support for D3B201 as seed ortholog is 100%.

Group of orthologs #686. Best score 95 bits
Score difference with first non-orthologous sequence - C.hominis:95 P.pallidum:95

Q5CNF8              	100.00%		D3BBG4              	100.00%
Bootstrap support for Q5CNF8 as seed ortholog is 100%.
Bootstrap support for D3BBG4 as seed ortholog is 100%.

Group of orthologs #687. Best score 95 bits
Score difference with first non-orthologous sequence - C.hominis:95 P.pallidum:95

Q5CKC8              	100.00%		D3BM84              	100.00%
Bootstrap support for Q5CKC8 as seed ortholog is 100%.
Bootstrap support for D3BM84 as seed ortholog is 100%.

Group of orthologs #688. Best score 94 bits
Score difference with first non-orthologous sequence - C.hominis:94 P.pallidum:94

Q5CIN1              	100.00%		D3B7E6              	100.00%
                    	       		D3B3H3              	14.19%
Bootstrap support for Q5CIN1 as seed ortholog is 100%.
Bootstrap support for D3B7E6 as seed ortholog is 100%.

Group of orthologs #689. Best score 94 bits
Score difference with first non-orthologous sequence - C.hominis:94 P.pallidum:94

Q5CE11              	100.00%		D3BFN4              	100.00%
Bootstrap support for Q5CE11 as seed ortholog is 100%.
Bootstrap support for D3BFN4 as seed ortholog is 100%.

Group of orthologs #690. Best score 94 bits
Score difference with first non-orthologous sequence - C.hominis:94 P.pallidum:94

Q5CGL7              	100.00%		D3BDY1              	100.00%
Bootstrap support for Q5CGL7 as seed ortholog is 100%.
Bootstrap support for D3BDY1 as seed ortholog is 100%.

Group of orthologs #691. Best score 94 bits
Score difference with first non-orthologous sequence - C.hominis:94 P.pallidum:94

Q5CJJ6              	100.00%		D3BCE5              	100.00%
Bootstrap support for Q5CJJ6 as seed ortholog is 100%.
Bootstrap support for D3BCE5 as seed ortholog is 100%.

Group of orthologs #692. Best score 94 bits
Score difference with first non-orthologous sequence - C.hominis:94 P.pallidum:94

Q5CFK2              	100.00%		D3BK63              	100.00%
Bootstrap support for Q5CFK2 as seed ortholog is 100%.
Bootstrap support for D3BK63 as seed ortholog is 100%.

Group of orthologs #693. Best score 94 bits
Score difference with first non-orthologous sequence - C.hominis:94 P.pallidum:94

Q5CMD2              	100.00%		D3BJ38              	100.00%
Bootstrap support for Q5CMD2 as seed ortholog is 100%.
Bootstrap support for D3BJ38 as seed ortholog is 100%.

Group of orthologs #694. Best score 94 bits
Score difference with first non-orthologous sequence - C.hominis:94 P.pallidum:94

Q5CF97              	100.00%		D3BRR6              	100.00%
Bootstrap support for Q5CF97 as seed ortholog is 100%.
Bootstrap support for D3BRR6 as seed ortholog is 100%.

Group of orthologs #695. Best score 94 bits
Score difference with first non-orthologous sequence - C.hominis:94 P.pallidum:94

Q5CIM3              	100.00%		D3BVL0              	100.00%
Bootstrap support for Q5CIM3 as seed ortholog is 100%.
Bootstrap support for D3BVL0 as seed ortholog is 100%.

Group of orthologs #696. Best score 93 bits
Score difference with first non-orthologous sequence - C.hominis:49 P.pallidum:93

Q5CHB2              	100.00%		D3B2W8              	100.00%
Bootstrap support for Q5CHB2 as seed ortholog is 61%.
Alternative seed ortholog is Q5CLQ1 (49 bits away from this cluster)
Bootstrap support for D3B2W8 as seed ortholog is 100%.

Group of orthologs #697. Best score 93 bits
Score difference with first non-orthologous sequence - C.hominis:93 P.pallidum:93

Q5CNG5              	100.00%		D3AXF9              	100.00%
Bootstrap support for Q5CNG5 as seed ortholog is 100%.
Bootstrap support for D3AXF9 as seed ortholog is 100%.

Group of orthologs #698. Best score 93 bits
Score difference with first non-orthologous sequence - C.hominis:93 P.pallidum:93

Q5CNK8              	100.00%		D3B913              	100.00%
Bootstrap support for Q5CNK8 as seed ortholog is 100%.
Bootstrap support for D3B913 as seed ortholog is 100%.

Group of orthologs #699. Best score 92 bits
Score difference with first non-orthologous sequence - C.hominis:28 P.pallidum:92

Q5CI93              	100.00%		D3B194              	100.00%
Bootstrap support for Q5CI93 as seed ortholog is 74%.
Alternative seed ortholog is Q5CGW9 (28 bits away from this cluster)
Bootstrap support for D3B194 as seed ortholog is 100%.

Group of orthologs #700. Best score 92 bits
Score difference with first non-orthologous sequence - C.hominis:92 P.pallidum:92

Q5CIQ3              	100.00%		D3BAZ2              	100.00%
Bootstrap support for Q5CIQ3 as seed ortholog is 100%.
Bootstrap support for D3BAZ2 as seed ortholog is 100%.

Group of orthologs #701. Best score 92 bits
Score difference with first non-orthologous sequence - C.hominis:92 P.pallidum:92

Q5CGB2              	100.00%		D3BN10              	100.00%
Bootstrap support for Q5CGB2 as seed ortholog is 100%.
Bootstrap support for D3BN10 as seed ortholog is 100%.

Group of orthologs #702. Best score 92 bits
Score difference with first non-orthologous sequence - C.hominis:92 P.pallidum:38

Q5CLU1              	100.00%		D3BKD3              	100.00%
Bootstrap support for Q5CLU1 as seed ortholog is 100%.
Bootstrap support for D3BKD3 as seed ortholog is 86%.

Group of orthologs #703. Best score 92 bits
Score difference with first non-orthologous sequence - C.hominis:92 P.pallidum:92

Q5CKE6              	100.00%		D3BNL3              	100.00%
Bootstrap support for Q5CKE6 as seed ortholog is 100%.
Bootstrap support for D3BNL3 as seed ortholog is 100%.

Group of orthologs #704. Best score 91 bits
Score difference with first non-orthologous sequence - C.hominis:91 P.pallidum:91

Q5CES0              	100.00%		D3BG88              	100.00%
                    	       		D3BMP7              	7.11%
Bootstrap support for Q5CES0 as seed ortholog is 100%.
Bootstrap support for D3BG88 as seed ortholog is 100%.

Group of orthologs #705. Best score 91 bits
Score difference with first non-orthologous sequence - C.hominis:91 P.pallidum:91

Q5CH68              	100.00%		D3BHR5              	100.00%
Bootstrap support for Q5CH68 as seed ortholog is 100%.
Bootstrap support for D3BHR5 as seed ortholog is 100%.

Group of orthologs #706. Best score 91 bits
Score difference with first non-orthologous sequence - C.hominis:91 P.pallidum:91

Q5CMR2              	100.00%		D3BNC7              	100.00%
Bootstrap support for Q5CMR2 as seed ortholog is 100%.
Bootstrap support for D3BNC7 as seed ortholog is 100%.

Group of orthologs #707. Best score 90 bits
Score difference with first non-orthologous sequence - C.hominis:90 P.pallidum:19

Q5CM26              	100.00%		D3B0Q7              	100.00%
                    	       		D3B664              	6.49%
Bootstrap support for Q5CM26 as seed ortholog is 100%.
Bootstrap support for D3B0Q7 as seed ortholog is 46%.
Alternative seed ortholog is D3B7Y6 (19 bits away from this cluster)

Group of orthologs #708. Best score 90 bits
Score difference with first non-orthologous sequence - C.hominis:90 P.pallidum:90

Q5CPC3              	100.00%		D3BGS2              	100.00%
                    	       		D3BQZ9              	7.65%
Bootstrap support for Q5CPC3 as seed ortholog is 100%.
Bootstrap support for D3BGS2 as seed ortholog is 100%.

Group of orthologs #709. Best score 90 bits
Score difference with first non-orthologous sequence - C.hominis:90 P.pallidum:90

Q5CH67              	100.00%		D3B9L3              	100.00%
Bootstrap support for Q5CH67 as seed ortholog is 100%.
Bootstrap support for D3B9L3 as seed ortholog is 100%.

Group of orthologs #710. Best score 90 bits
Score difference with first non-orthologous sequence - C.hominis:90 P.pallidum:90

Q5CF52              	100.00%		D3BR47              	100.00%
Bootstrap support for Q5CF52 as seed ortholog is 100%.
Bootstrap support for D3BR47 as seed ortholog is 100%.

Group of orthologs #711. Best score 90 bits
Score difference with first non-orthologous sequence - C.hominis:90 P.pallidum:90

Q5CLX0              	100.00%		D3BN29              	100.00%
Bootstrap support for Q5CLX0 as seed ortholog is 100%.
Bootstrap support for D3BN29 as seed ortholog is 100%.

Group of orthologs #712. Best score 89 bits
Score difference with first non-orthologous sequence - C.hominis:89 P.pallidum:89

Q5CHT0              	100.00%		D3B862              	100.00%
Bootstrap support for Q5CHT0 as seed ortholog is 100%.
Bootstrap support for D3B862 as seed ortholog is 100%.

Group of orthologs #713. Best score 89 bits
Score difference with first non-orthologous sequence - C.hominis:89 P.pallidum:89

Q5CHU5              	100.00%		D3BTL0              	100.00%
Bootstrap support for Q5CHU5 as seed ortholog is 100%.
Bootstrap support for D3BTL0 as seed ortholog is 100%.

Group of orthologs #714. Best score 88 bits
Score difference with first non-orthologous sequence - C.hominis:88 P.pallidum:88

Q5CEA9              	100.00%		D3B5X9              	100.00%
Bootstrap support for Q5CEA9 as seed ortholog is 100%.
Bootstrap support for D3B5X9 as seed ortholog is 100%.

Group of orthologs #715. Best score 88 bits
Score difference with first non-orthologous sequence - C.hominis:88 P.pallidum:88

Q5CP29              	100.00%		D3B1A4              	100.00%
Bootstrap support for Q5CP29 as seed ortholog is 100%.
Bootstrap support for D3B1A4 as seed ortholog is 100%.

Group of orthologs #716. Best score 88 bits
Score difference with first non-orthologous sequence - C.hominis:88 P.pallidum:88

Q5CDS0              	100.00%		D3BR67              	100.00%
Bootstrap support for Q5CDS0 as seed ortholog is 100%.
Bootstrap support for D3BR67 as seed ortholog is 100%.

Group of orthologs #717. Best score 87 bits
Score difference with first non-orthologous sequence - C.hominis:31 P.pallidum:87

Q5CGA4              	100.00%		D3BAA3              	100.00%
Q5CI52              	32.47%		
Bootstrap support for Q5CGA4 as seed ortholog is 72%.
Alternative seed ortholog is Q5CM42 (31 bits away from this cluster)
Bootstrap support for D3BAA3 as seed ortholog is 100%.

Group of orthologs #718. Best score 87 bits
Score difference with first non-orthologous sequence - C.hominis:87 P.pallidum:87

Q5CJB8              	100.00%		D3BDB6              	100.00%
                    	       		D3B7S8              	7.58%
Bootstrap support for Q5CJB8 as seed ortholog is 100%.
Bootstrap support for D3BDB6 as seed ortholog is 100%.

Group of orthologs #719. Best score 87 bits
Score difference with first non-orthologous sequence - C.hominis:87 P.pallidum:27

Q5CFW1              	100.00%		D3AWB1              	100.00%
Bootstrap support for Q5CFW1 as seed ortholog is 100%.
Bootstrap support for D3AWB1 as seed ortholog is 69%.
Alternative seed ortholog is D3B3J9 (27 bits away from this cluster)

Group of orthologs #720. Best score 87 bits
Score difference with first non-orthologous sequence - C.hominis:87 P.pallidum:87

Q5CJ44              	100.00%		D3AYN0              	100.00%
Bootstrap support for Q5CJ44 as seed ortholog is 100%.
Bootstrap support for D3AYN0 as seed ortholog is 100%.

Group of orthologs #721. Best score 87 bits
Score difference with first non-orthologous sequence - C.hominis:87 P.pallidum:87

Q5CI95              	100.00%		D3AZR0              	100.00%
Bootstrap support for Q5CI95 as seed ortholog is 100%.
Bootstrap support for D3AZR0 as seed ortholog is 100%.

Group of orthologs #722. Best score 87 bits
Score difference with first non-orthologous sequence - C.hominis:87 P.pallidum:87

Q5CN54              	100.00%		D3AVN0              	100.00%
Bootstrap support for Q5CN54 as seed ortholog is 100%.
Bootstrap support for D3AVN0 as seed ortholog is 100%.

Group of orthologs #723. Best score 87 bits
Score difference with first non-orthologous sequence - C.hominis:87 P.pallidum:87

Q5CLQ8              	100.00%		D3B1G8              	100.00%
Bootstrap support for Q5CLQ8 as seed ortholog is 100%.
Bootstrap support for D3B1G8 as seed ortholog is 100%.

Group of orthologs #724. Best score 87 bits
Score difference with first non-orthologous sequence - C.hominis:87 P.pallidum:87

Q5CPB6              	100.00%		D3B052              	100.00%
Bootstrap support for Q5CPB6 as seed ortholog is 100%.
Bootstrap support for D3B052 as seed ortholog is 100%.

Group of orthologs #725. Best score 86 bits
Score difference with first non-orthologous sequence - C.hominis:86 P.pallidum:86

Q5CE62              	100.00%		D3BC68              	100.00%
Bootstrap support for Q5CE62 as seed ortholog is 100%.
Bootstrap support for D3BC68 as seed ortholog is 100%.

Group of orthologs #726. Best score 86 bits
Score difference with first non-orthologous sequence - C.hominis:86 P.pallidum:22

Q5CJY8              	100.00%		D3B844              	100.00%
Bootstrap support for Q5CJY8 as seed ortholog is 100%.
Bootstrap support for D3B844 as seed ortholog is 77%.

Group of orthologs #727. Best score 86 bits
Score difference with first non-orthologous sequence - C.hominis:86 P.pallidum:86

Q5CG79              	100.00%		D3BNV1              	100.00%
Bootstrap support for Q5CG79 as seed ortholog is 100%.
Bootstrap support for D3BNV1 as seed ortholog is 100%.

Group of orthologs #728. Best score 86 bits
Score difference with first non-orthologous sequence - C.hominis:86 P.pallidum:86

Q5CJ07              	100.00%		D3BRY9              	100.00%
Bootstrap support for Q5CJ07 as seed ortholog is 100%.
Bootstrap support for D3BRY9 as seed ortholog is 100%.

Group of orthologs #729. Best score 86 bits
Score difference with first non-orthologous sequence - C.hominis:86 P.pallidum:86

Q5CJ13              	100.00%		D3BUQ1              	100.00%
Bootstrap support for Q5CJ13 as seed ortholog is 100%.
Bootstrap support for D3BUQ1 as seed ortholog is 100%.

Group of orthologs #730. Best score 85 bits
Score difference with first non-orthologous sequence - C.hominis:85 P.pallidum:85

Q5CIQ7              	100.00%		D3AZF4              	100.00%
Bootstrap support for Q5CIQ7 as seed ortholog is 100%.
Bootstrap support for D3AZF4 as seed ortholog is 100%.

Group of orthologs #731. Best score 85 bits
Score difference with first non-orthologous sequence - C.hominis:85 P.pallidum:37

Q5CMJ5              	100.00%		D3B9E9              	100.00%
Bootstrap support for Q5CMJ5 as seed ortholog is 100%.
Bootstrap support for D3B9E9 as seed ortholog is 75%.

Group of orthologs #732. Best score 85 bits
Score difference with first non-orthologous sequence - C.hominis:85 P.pallidum:85

Q5CNG3              	100.00%		D3B9P1              	100.00%
Bootstrap support for Q5CNG3 as seed ortholog is 100%.
Bootstrap support for D3B9P1 as seed ortholog is 100%.

Group of orthologs #733. Best score 84 bits
Score difference with first non-orthologous sequence - C.hominis:84 P.pallidum:84

Q5CLI5              	100.00%		D3BH44              	100.00%
Q5CLI6              	23.55%		
Bootstrap support for Q5CLI5 as seed ortholog is 100%.
Bootstrap support for D3BH44 as seed ortholog is 100%.

Group of orthologs #734. Best score 84 bits
Score difference with first non-orthologous sequence - C.hominis:84 P.pallidum:84

Q5CM01              	100.00%		D3BU58              	100.00%
                    	       		D3BKA2              	7.54%
Bootstrap support for Q5CM01 as seed ortholog is 100%.
Bootstrap support for D3BU58 as seed ortholog is 100%.

Group of orthologs #735. Best score 84 bits
Score difference with first non-orthologous sequence - C.hominis:84 P.pallidum:84

Q5CFV9              	100.00%		D3B6E4              	100.00%
Bootstrap support for Q5CFV9 as seed ortholog is 100%.
Bootstrap support for D3B6E4 as seed ortholog is 100%.

Group of orthologs #736. Best score 84 bits
Score difference with first non-orthologous sequence - C.hominis:84 P.pallidum:7

Q5CGZ7              	100.00%		D3B6G5              	100.00%
Bootstrap support for Q5CGZ7 as seed ortholog is 100%.
Bootstrap support for D3B6G5 as seed ortholog is 81%.

Group of orthologs #737. Best score 84 bits
Score difference with first non-orthologous sequence - C.hominis:84 P.pallidum:84

Q5CJ65              	100.00%		D3BDC7              	100.00%
Bootstrap support for Q5CJ65 as seed ortholog is 100%.
Bootstrap support for D3BDC7 as seed ortholog is 100%.

Group of orthologs #738. Best score 84 bits
Score difference with first non-orthologous sequence - C.hominis:2 P.pallidum:84

Q5CFQ2              	100.00%		D3BLD3              	100.00%
Bootstrap support for Q5CFQ2 as seed ortholog is 71%.
Alternative seed ortholog is Q5CE74 (2 bits away from this cluster)
Bootstrap support for D3BLD3 as seed ortholog is 100%.

Group of orthologs #739. Best score 83 bits
Score difference with first non-orthologous sequence - C.hominis:83 P.pallidum:83

Q5CG33              	100.00%		D3BJG7              	100.00%
                    	       		D3B155              	7.07%
Bootstrap support for Q5CG33 as seed ortholog is 100%.
Bootstrap support for D3BJG7 as seed ortholog is 100%.

Group of orthologs #740. Best score 83 bits
Score difference with first non-orthologous sequence - C.hominis:83 P.pallidum:39

Q5CIA1              	100.00%		D3BAX8              	100.00%
Bootstrap support for Q5CIA1 as seed ortholog is 100%.
Bootstrap support for D3BAX8 as seed ortholog is 97%.

Group of orthologs #741. Best score 83 bits
Score difference with first non-orthologous sequence - C.hominis:83 P.pallidum:83

Q5CJ48              	100.00%		D3BAU6              	100.00%
Bootstrap support for Q5CJ48 as seed ortholog is 100%.
Bootstrap support for D3BAU6 as seed ortholog is 100%.

Group of orthologs #742. Best score 83 bits
Score difference with first non-orthologous sequence - C.hominis:83 P.pallidum:83

Q5CHZ7              	100.00%		D3BE01              	100.00%
Bootstrap support for Q5CHZ7 as seed ortholog is 100%.
Bootstrap support for D3BE01 as seed ortholog is 100%.

Group of orthologs #743. Best score 83 bits
Score difference with first non-orthologous sequence - C.hominis:83 P.pallidum:83

Q5CLX9              	100.00%		D3BCH8              	100.00%
Bootstrap support for Q5CLX9 as seed ortholog is 100%.
Bootstrap support for D3BCH8 as seed ortholog is 100%.

Group of orthologs #744. Best score 83 bits
Score difference with first non-orthologous sequence - C.hominis:83 P.pallidum:83

Q5CNF6              	100.00%		D3BCL8              	100.00%
Bootstrap support for Q5CNF6 as seed ortholog is 100%.
Bootstrap support for D3BCL8 as seed ortholog is 100%.

Group of orthologs #745. Best score 82 bits
Score difference with first non-orthologous sequence - C.hominis:82 P.pallidum:82

Q5CJW9              	100.00%		D3BR02              	100.00%
                    	       		D3B450              	12.57%
Bootstrap support for Q5CJW9 as seed ortholog is 100%.
Bootstrap support for D3BR02 as seed ortholog is 100%.

Group of orthologs #746. Best score 82 bits
Score difference with first non-orthologous sequence - C.hominis:82 P.pallidum:82

Q5CKX1              	100.00%		D3AVV1              	100.00%
Bootstrap support for Q5CKX1 as seed ortholog is 100%.
Bootstrap support for D3AVV1 as seed ortholog is 100%.

Group of orthologs #747. Best score 82 bits
Score difference with first non-orthologous sequence - C.hominis:37 P.pallidum:82

Q5CJ87              	100.00%		D3AZU6              	100.00%
Bootstrap support for Q5CJ87 as seed ortholog is 92%.
Bootstrap support for D3AZU6 as seed ortholog is 100%.

Group of orthologs #748. Best score 82 bits
Score difference with first non-orthologous sequence - C.hominis:82 P.pallidum:82

Q5CI03              	100.00%		D3BAR1              	100.00%
Bootstrap support for Q5CI03 as seed ortholog is 100%.
Bootstrap support for D3BAR1 as seed ortholog is 100%.

Group of orthologs #749. Best score 82 bits
Score difference with first non-orthologous sequence - C.hominis:82 P.pallidum:19

Q5CLA5              	100.00%		D3BCC1              	100.00%
Bootstrap support for Q5CLA5 as seed ortholog is 100%.
Bootstrap support for D3BCC1 as seed ortholog is 75%.

Group of orthologs #750. Best score 81 bits
Score difference with first non-orthologous sequence - C.hominis:81 P.pallidum:81

Q5CMA2              	100.00%		D3B734              	100.00%
Bootstrap support for Q5CMA2 as seed ortholog is 100%.
Bootstrap support for D3B734 as seed ortholog is 100%.

Group of orthologs #751. Best score 81 bits
Score difference with first non-orthologous sequence - C.hominis:81 P.pallidum:81

Q5CEM0              	100.00%		D3BI32              	100.00%
Bootstrap support for Q5CEM0 as seed ortholog is 100%.
Bootstrap support for D3BI32 as seed ortholog is 100%.

Group of orthologs #752. Best score 81 bits
Score difference with first non-orthologous sequence - C.hominis:81 P.pallidum:81

Q5CKP9              	100.00%		D3BCW0              	100.00%
Bootstrap support for Q5CKP9 as seed ortholog is 100%.
Bootstrap support for D3BCW0 as seed ortholog is 100%.

Group of orthologs #753. Best score 81 bits
Score difference with first non-orthologous sequence - C.hominis:81 P.pallidum:81

Q5CNL5              	100.00%		D3BF67              	100.00%
Bootstrap support for Q5CNL5 as seed ortholog is 100%.
Bootstrap support for D3BF67 as seed ortholog is 100%.

Group of orthologs #754. Best score 80 bits
Score difference with first non-orthologous sequence - C.hominis:80 P.pallidum:80

Q5CIX3              	100.00%		D3AY63              	100.00%
Bootstrap support for Q5CIX3 as seed ortholog is 100%.
Bootstrap support for D3AY63 as seed ortholog is 100%.

Group of orthologs #755. Best score 80 bits
Score difference with first non-orthologous sequence - C.hominis:80 P.pallidum:80

Q5CFD9              	100.00%		D3BKH9              	100.00%
Bootstrap support for Q5CFD9 as seed ortholog is 100%.
Bootstrap support for D3BKH9 as seed ortholog is 100%.

Group of orthologs #756. Best score 79 bits
Score difference with first non-orthologous sequence - C.hominis:79 P.pallidum:79

Q5CL25              	100.00%		D3B5L5              	100.00%
Bootstrap support for Q5CL25 as seed ortholog is 100%.
Bootstrap support for D3B5L5 as seed ortholog is 100%.

Group of orthologs #757. Best score 79 bits
Score difference with first non-orthologous sequence - C.hominis:79 P.pallidum:79

Q5CEZ3              	100.00%		D3BD34              	100.00%
Bootstrap support for Q5CEZ3 as seed ortholog is 100%.
Bootstrap support for D3BD34 as seed ortholog is 100%.

Group of orthologs #758. Best score 79 bits
Score difference with first non-orthologous sequence - C.hominis:79 P.pallidum:17

Q5CFY3              	100.00%		D3BFX1              	100.00%
Bootstrap support for Q5CFY3 as seed ortholog is 100%.
Bootstrap support for D3BFX1 as seed ortholog is 91%.

Group of orthologs #759. Best score 78 bits
Score difference with first non-orthologous sequence - C.hominis:78 P.pallidum:78

Q5CF61              	100.00%		D3BT83              	100.00%
                    	       		D3B4Y7              	11.66%
                    	       		D3B9Y7              	6.19%
Bootstrap support for Q5CF61 as seed ortholog is 100%.
Bootstrap support for D3BT83 as seed ortholog is 100%.

Group of orthologs #760. Best score 78 bits
Score difference with first non-orthologous sequence - C.hominis:78 P.pallidum:78

Q5CJE7              	100.00%		D3AVJ5              	100.00%
Bootstrap support for Q5CJE7 as seed ortholog is 100%.
Bootstrap support for D3AVJ5 as seed ortholog is 100%.

Group of orthologs #761. Best score 78 bits
Score difference with first non-orthologous sequence - C.hominis:78 P.pallidum:78

Q5CKZ6              	100.00%		D3BEE9              	100.00%
Bootstrap support for Q5CKZ6 as seed ortholog is 100%.
Bootstrap support for D3BEE9 as seed ortholog is 100%.

Group of orthologs #762. Best score 77 bits
Score difference with first non-orthologous sequence - C.hominis:77 P.pallidum:77

Q5CNS3              	100.00%		D3AYB4              	100.00%
                    	       		D3AWU8              	35.08%
Bootstrap support for Q5CNS3 as seed ortholog is 100%.
Bootstrap support for D3AYB4 as seed ortholog is 100%.

Group of orthologs #763. Best score 77 bits
Score difference with first non-orthologous sequence - C.hominis:77 P.pallidum:34

Q5CKZ3              	100.00%		D3AXH2              	100.00%
Bootstrap support for Q5CKZ3 as seed ortholog is 100%.
Bootstrap support for D3AXH2 as seed ortholog is 84%.

Group of orthologs #764. Best score 77 bits
Score difference with first non-orthologous sequence - C.hominis:77 P.pallidum:77

Q5CJ37              	100.00%		D3B1P7              	100.00%
Bootstrap support for Q5CJ37 as seed ortholog is 100%.
Bootstrap support for D3B1P7 as seed ortholog is 100%.

Group of orthologs #765. Best score 77 bits
Score difference with first non-orthologous sequence - C.hominis:77 P.pallidum:77

Q5CIA4              	100.00%		D3B4F5              	100.00%
Bootstrap support for Q5CIA4 as seed ortholog is 100%.
Bootstrap support for D3B4F5 as seed ortholog is 100%.

Group of orthologs #766. Best score 77 bits
Score difference with first non-orthologous sequence - C.hominis:77 P.pallidum:77

Q5CJX4              	100.00%		D3B8H0              	100.00%
Bootstrap support for Q5CJX4 as seed ortholog is 100%.
Bootstrap support for D3B8H0 as seed ortholog is 100%.

Group of orthologs #767. Best score 77 bits
Score difference with first non-orthologous sequence - C.hominis:77 P.pallidum:77

Q5CKE8              	100.00%		D3BAK2              	100.00%
Bootstrap support for Q5CKE8 as seed ortholog is 100%.
Bootstrap support for D3BAK2 as seed ortholog is 100%.

Group of orthologs #768. Best score 76 bits
Score difference with first non-orthologous sequence - C.hominis:76 P.pallidum:76

Q5CKC1              	100.00%		D3B0G4              	100.00%
Bootstrap support for Q5CKC1 as seed ortholog is 100%.
Bootstrap support for D3B0G4 as seed ortholog is 100%.

Group of orthologs #769. Best score 76 bits
Score difference with first non-orthologous sequence - C.hominis:76 P.pallidum:76

Q5CFW6              	100.00%		D3B6R3              	100.00%
Bootstrap support for Q5CFW6 as seed ortholog is 100%.
Bootstrap support for D3B6R3 as seed ortholog is 100%.

Group of orthologs #770. Best score 76 bits
Score difference with first non-orthologous sequence - C.hominis:76 P.pallidum:76

Q5CLW8              	100.00%		D3BB34              	100.00%
Bootstrap support for Q5CLW8 as seed ortholog is 100%.
Bootstrap support for D3BB34 as seed ortholog is 100%.

Group of orthologs #771. Best score 76 bits
Score difference with first non-orthologous sequence - C.hominis:76 P.pallidum:76

Q5CNI5              	100.00%		D3BMW9              	100.00%
Bootstrap support for Q5CNI5 as seed ortholog is 100%.
Bootstrap support for D3BMW9 as seed ortholog is 100%.

Group of orthologs #772. Best score 76 bits
Score difference with first non-orthologous sequence - C.hominis:76 P.pallidum:5

Q5CLA8              	100.00%		D3BSJ3              	100.00%
Bootstrap support for Q5CLA8 as seed ortholog is 100%.
Bootstrap support for D3BSJ3 as seed ortholog is 62%.
Alternative seed ortholog is D3B554 (5 bits away from this cluster)

Group of orthologs #773. Best score 75 bits
Score difference with first non-orthologous sequence - C.hominis:75 P.pallidum:19

Q5CPD3              	100.00%		D3BFG1              	100.00%
                    	       		D3BIU9              	74.93%
Bootstrap support for Q5CPD3 as seed ortholog is 100%.
Bootstrap support for D3BFG1 as seed ortholog is 73%.
Alternative seed ortholog is D3BDB7 (19 bits away from this cluster)

Group of orthologs #774. Best score 75 bits
Score difference with first non-orthologous sequence - C.hominis:75 P.pallidum:75

Q5CGY0              	100.00%		D3B279              	100.00%
Bootstrap support for Q5CGY0 as seed ortholog is 100%.
Bootstrap support for D3B279 as seed ortholog is 100%.

Group of orthologs #775. Best score 75 bits
Score difference with first non-orthologous sequence - C.hominis:75 P.pallidum:75

Q5CIV3              	100.00%		D3BJ34              	100.00%
Bootstrap support for Q5CIV3 as seed ortholog is 100%.
Bootstrap support for D3BJ34 as seed ortholog is 100%.

Group of orthologs #776. Best score 75 bits
Score difference with first non-orthologous sequence - C.hominis:75 P.pallidum:75

Q5CMV1              	100.00%		D3BQV3              	100.00%
Bootstrap support for Q5CMV1 as seed ortholog is 100%.
Bootstrap support for D3BQV3 as seed ortholog is 100%.

Group of orthologs #777. Best score 74 bits
Score difference with first non-orthologous sequence - C.hominis:74 P.pallidum:74

Q5CJV2              	100.00%		D3B703              	100.00%
                    	       		D3BTQ2              	6.80%
Bootstrap support for Q5CJV2 as seed ortholog is 100%.
Bootstrap support for D3B703 as seed ortholog is 100%.

Group of orthologs #778. Best score 74 bits
Score difference with first non-orthologous sequence - C.hominis:74 P.pallidum:74

Q5CMQ8              	100.00%		D3AVM9              	100.00%
Bootstrap support for Q5CMQ8 as seed ortholog is 100%.
Bootstrap support for D3AVM9 as seed ortholog is 100%.

Group of orthologs #779. Best score 74 bits
Score difference with first non-orthologous sequence - C.hominis:74 P.pallidum:74

Q5CMM1              	100.00%		D3AXS1              	100.00%
Bootstrap support for Q5CMM1 as seed ortholog is 100%.
Bootstrap support for D3AXS1 as seed ortholog is 100%.

Group of orthologs #780. Best score 74 bits
Score difference with first non-orthologous sequence - C.hominis:74 P.pallidum:74

Q5CKK3              	100.00%		D3B3G5              	100.00%
Bootstrap support for Q5CKK3 as seed ortholog is 100%.
Bootstrap support for D3B3G5 as seed ortholog is 100%.

Group of orthologs #781. Best score 74 bits
Score difference with first non-orthologous sequence - C.hominis:74 P.pallidum:74

Q5CN06              	100.00%		D3B1L8              	100.00%
Bootstrap support for Q5CN06 as seed ortholog is 100%.
Bootstrap support for D3B1L8 as seed ortholog is 100%.

Group of orthologs #782. Best score 74 bits
Score difference with first non-orthologous sequence - C.hominis:74 P.pallidum:74

Q5CEF0              	100.00%		D3BMA2              	100.00%
Bootstrap support for Q5CEF0 as seed ortholog is 100%.
Bootstrap support for D3BMA2 as seed ortholog is 100%.

Group of orthologs #783. Best score 73 bits
Score difference with first non-orthologous sequence - C.hominis:73 P.pallidum:73

Q5CF54              	100.00%		D3BQY5              	100.00%
Bootstrap support for Q5CF54 as seed ortholog is 100%.
Bootstrap support for D3BQY5 as seed ortholog is 100%.

Group of orthologs #784. Best score 73 bits
Score difference with first non-orthologous sequence - C.hominis:73 P.pallidum:73

Q5CNC5              	100.00%		D3BM04              	100.00%
Bootstrap support for Q5CNC5 as seed ortholog is 100%.
Bootstrap support for D3BM04 as seed ortholog is 100%.

Group of orthologs #785. Best score 72 bits
Score difference with first non-orthologous sequence - C.hominis:72 P.pallidum:72

Q5CJF9              	100.00%		D3BGQ6              	100.00%
Bootstrap support for Q5CJF9 as seed ortholog is 100%.
Bootstrap support for D3BGQ6 as seed ortholog is 100%.

Group of orthologs #786. Best score 72 bits
Score difference with first non-orthologous sequence - C.hominis:72 P.pallidum:72

Q5CK98              	100.00%		D3BKF7              	100.00%
Bootstrap support for Q5CK98 as seed ortholog is 100%.
Bootstrap support for D3BKF7 as seed ortholog is 100%.

Group of orthologs #787. Best score 72 bits
Score difference with first non-orthologous sequence - C.hominis:72 P.pallidum:72

Q5CGC4              	100.00%		D3BRL6              	100.00%
Bootstrap support for Q5CGC4 as seed ortholog is 100%.
Bootstrap support for D3BRL6 as seed ortholog is 100%.

Group of orthologs #788. Best score 72 bits
Score difference with first non-orthologous sequence - C.hominis:1 P.pallidum:22

Q5CHH3              	100.00%		D3BQQ9              	100.00%
Bootstrap support for Q5CHH3 as seed ortholog is 51%.
Alternative seed ortholog is Q5CEW2 (1 bits away from this cluster)
Bootstrap support for D3BQQ9 as seed ortholog is 76%.

Group of orthologs #789. Best score 72 bits
Score difference with first non-orthologous sequence - C.hominis:72 P.pallidum:72

Q5CJ29              	100.00%		D3BUC3              	100.00%
Bootstrap support for Q5CJ29 as seed ortholog is 100%.
Bootstrap support for D3BUC3 as seed ortholog is 100%.

Group of orthologs #790. Best score 71 bits
Score difference with first non-orthologous sequence - C.hominis:71 P.pallidum:71

Q5CGZ2              	100.00%		D3BQB2              	100.00%
                    	       		D3BQB6              	37.46%
                    	       		D3B4H8              	10.95%
                    	       		D3BG32              	10.51%
                    	       		D3BHC7              	10.08%
                    	       		D3BVF7              	9.20%
Bootstrap support for Q5CGZ2 as seed ortholog is 100%.
Bootstrap support for D3BQB2 as seed ortholog is 100%.

Group of orthologs #791. Best score 71 bits
Score difference with first non-orthologous sequence - C.hominis:71 P.pallidum:71

Q5CMM6              	100.00%		D3B053              	100.00%
                    	       		D3B2T3              	9.50%
Bootstrap support for Q5CMM6 as seed ortholog is 100%.
Bootstrap support for D3B053 as seed ortholog is 100%.

Group of orthologs #792. Best score 71 bits
Score difference with first non-orthologous sequence - C.hominis:71 P.pallidum:71

Q5CL46              	100.00%		D3BCG9              	100.00%
Bootstrap support for Q5CL46 as seed ortholog is 100%.
Bootstrap support for D3BCG9 as seed ortholog is 100%.

Group of orthologs #793. Best score 71 bits
Score difference with first non-orthologous sequence - C.hominis:71 P.pallidum:71

Q5CHY1              	100.00%		D3BNF6              	100.00%
Bootstrap support for Q5CHY1 as seed ortholog is 100%.
Bootstrap support for D3BNF6 as seed ortholog is 100%.

Group of orthologs #794. Best score 71 bits
Score difference with first non-orthologous sequence - C.hominis:71 P.pallidum:71

Q5CGC5              	100.00%		D3BSB4              	100.00%
Bootstrap support for Q5CGC5 as seed ortholog is 100%.
Bootstrap support for D3BSB4 as seed ortholog is 100%.

Group of orthologs #795. Best score 70 bits
Score difference with first non-orthologous sequence - C.hominis:70 P.pallidum:70

Q5CKN2              	100.00%		D3AVZ9              	100.00%
Bootstrap support for Q5CKN2 as seed ortholog is 100%.
Bootstrap support for D3AVZ9 as seed ortholog is 100%.

Group of orthologs #796. Best score 70 bits
Score difference with first non-orthologous sequence - C.hominis:70 P.pallidum:70

Q5CLZ9              	100.00%		D3B912              	100.00%
Bootstrap support for Q5CLZ9 as seed ortholog is 100%.
Bootstrap support for D3B912 as seed ortholog is 100%.

Group of orthologs #797. Best score 70 bits
Score difference with first non-orthologous sequence - C.hominis:70 P.pallidum:70

Q5CHY3              	100.00%		D3BKE3              	100.00%
Bootstrap support for Q5CHY3 as seed ortholog is 100%.
Bootstrap support for D3BKE3 as seed ortholog is 100%.

Group of orthologs #798. Best score 70 bits
Score difference with first non-orthologous sequence - C.hominis:70 P.pallidum:70

Q5CJS2              	100.00%		D3BJ37              	100.00%
Bootstrap support for Q5CJS2 as seed ortholog is 100%.
Bootstrap support for D3BJ37 as seed ortholog is 100%.

Group of orthologs #799. Best score 70 bits
Score difference with first non-orthologous sequence - C.hominis:70 P.pallidum:70

Q5CNH9              	100.00%		D3BFT1              	100.00%
Bootstrap support for Q5CNH9 as seed ortholog is 100%.
Bootstrap support for D3BFT1 as seed ortholog is 100%.

Group of orthologs #800. Best score 69 bits
Score difference with first non-orthologous sequence - C.hominis:69 P.pallidum:69

Q5CFR2              	100.00%		D3BMN2              	100.00%
                    	       		D3BMV4              	8.79%
Bootstrap support for Q5CFR2 as seed ortholog is 100%.
Bootstrap support for D3BMN2 as seed ortholog is 100%.

Group of orthologs #801. Best score 69 bits
Score difference with first non-orthologous sequence - C.hominis:69 P.pallidum:69

Q5CMG2              	100.00%		D3BH99              	100.00%
                    	       		D3B1C3              	40.45%
Bootstrap support for Q5CMG2 as seed ortholog is 100%.
Bootstrap support for D3BH99 as seed ortholog is 100%.

Group of orthologs #802. Best score 69 bits
Score difference with first non-orthologous sequence - C.hominis:8 P.pallidum:26

Q5CIX5              	100.00%		D3B0F6              	100.00%
Bootstrap support for Q5CIX5 as seed ortholog is 63%.
Alternative seed ortholog is Q5CLS3 (8 bits away from this cluster)
Bootstrap support for D3B0F6 as seed ortholog is 90%.

Group of orthologs #803. Best score 69 bits
Score difference with first non-orthologous sequence - C.hominis:69 P.pallidum:69

Q5CJI6              	100.00%		D3B6R0              	100.00%
Bootstrap support for Q5CJI6 as seed ortholog is 100%.
Bootstrap support for D3B6R0 as seed ortholog is 100%.

Group of orthologs #804. Best score 69 bits
Score difference with first non-orthologous sequence - C.hominis:69 P.pallidum:69

Q5CLN0              	100.00%		D3BAV6              	100.00%
Bootstrap support for Q5CLN0 as seed ortholog is 100%.
Bootstrap support for D3BAV6 as seed ortholog is 100%.

Group of orthologs #805. Best score 69 bits
Score difference with first non-orthologous sequence - C.hominis:69 P.pallidum:69

Q5CFU2              	100.00%		D3BRU0              	100.00%
Bootstrap support for Q5CFU2 as seed ortholog is 100%.
Bootstrap support for D3BRU0 as seed ortholog is 100%.

Group of orthologs #806. Best score 68 bits
Score difference with first non-orthologous sequence - C.hominis:68 P.pallidum:68

Q5CF40              	100.00%		D3BER1              	100.00%
Bootstrap support for Q5CF40 as seed ortholog is 100%.
Bootstrap support for D3BER1 as seed ortholog is 100%.

Group of orthologs #807. Best score 67 bits
Score difference with first non-orthologous sequence - C.hominis:67 P.pallidum:67

Q5CMI8              	100.00%		D3BAX1              	100.00%
Q5CKG6              	10.38%		
Bootstrap support for Q5CMI8 as seed ortholog is 100%.
Bootstrap support for D3BAX1 as seed ortholog is 100%.

Group of orthologs #808. Best score 67 bits
Score difference with first non-orthologous sequence - C.hominis:67 P.pallidum:67

Q5CHF9              	100.00%		D3BI19              	100.00%
Bootstrap support for Q5CHF9 as seed ortholog is 100%.
Bootstrap support for D3BI19 as seed ortholog is 100%.

Group of orthologs #809. Best score 67 bits
Score difference with first non-orthologous sequence - C.hominis:67 P.pallidum:67

Q5CIF7              	100.00%		D3BHE8              	100.00%
Bootstrap support for Q5CIF7 as seed ortholog is 100%.
Bootstrap support for D3BHE8 as seed ortholog is 100%.

Group of orthologs #810. Best score 67 bits
Score difference with first non-orthologous sequence - C.hominis:67 P.pallidum:67

Q5CFX0              	100.00%		D3BM79              	100.00%
Bootstrap support for Q5CFX0 as seed ortholog is 100%.
Bootstrap support for D3BM79 as seed ortholog is 100%.

Group of orthologs #811. Best score 66 bits
Score difference with first non-orthologous sequence - C.hominis:66 P.pallidum:5

Q5CKA7              	100.00%		D3B9I0              	100.00%
                    	       		D3B630              	13.00%
                    	       		D3BR72              	5.54%
Bootstrap support for Q5CKA7 as seed ortholog is 100%.
Bootstrap support for D3B9I0 as seed ortholog is 56%.
Alternative seed ortholog is D3B9L8 (5 bits away from this cluster)

Group of orthologs #812. Best score 66 bits
Score difference with first non-orthologous sequence - C.hominis:66 P.pallidum:66

Q5CLW3              	100.00%		D3AVN1              	100.00%
Bootstrap support for Q5CLW3 as seed ortholog is 100%.
Bootstrap support for D3AVN1 as seed ortholog is 100%.

Group of orthologs #813. Best score 66 bits
Score difference with first non-orthologous sequence - C.hominis:66 P.pallidum:66

Q5CHA6              	100.00%		D3B811              	100.00%
Bootstrap support for Q5CHA6 as seed ortholog is 100%.
Bootstrap support for D3B811 as seed ortholog is 100%.

Group of orthologs #814. Best score 66 bits
Score difference with first non-orthologous sequence - C.hominis:66 P.pallidum:66

Q5CMK4              	100.00%		D3BN16              	100.00%
Bootstrap support for Q5CMK4 as seed ortholog is 100%.
Bootstrap support for D3BN16 as seed ortholog is 100%.

Group of orthologs #815. Best score 66 bits
Score difference with first non-orthologous sequence - C.hominis:5 P.pallidum:66

Q5CLW5              	100.00%		D3BU12              	100.00%
Bootstrap support for Q5CLW5 as seed ortholog is 56%.
Alternative seed ortholog is Q5CHJ8 (5 bits away from this cluster)
Bootstrap support for D3BU12 as seed ortholog is 100%.

Group of orthologs #816. Best score 65 bits
Score difference with first non-orthologous sequence - C.hominis:4 P.pallidum:65

Q5CNU2              	100.00%		D3AY14              	100.00%
Bootstrap support for Q5CNU2 as seed ortholog is 62%.
Alternative seed ortholog is Q5CNG9 (4 bits away from this cluster)
Bootstrap support for D3AY14 as seed ortholog is 100%.

Group of orthologs #817. Best score 65 bits
Score difference with first non-orthologous sequence - C.hominis:65 P.pallidum:65

Q5CE66              	100.00%		D3BCA0              	100.00%
Bootstrap support for Q5CE66 as seed ortholog is 100%.
Bootstrap support for D3BCA0 as seed ortholog is 100%.

Group of orthologs #818. Best score 65 bits
Score difference with first non-orthologous sequence - C.hominis:65 P.pallidum:65

Q5CP44              	100.00%		D3B7B3              	100.00%
Bootstrap support for Q5CP44 as seed ortholog is 100%.
Bootstrap support for D3B7B3 as seed ortholog is 100%.

Group of orthologs #819. Best score 65 bits
Score difference with first non-orthologous sequence - C.hominis:65 P.pallidum:65

Q5CE32              	100.00%		D3BIN1              	100.00%
Bootstrap support for Q5CE32 as seed ortholog is 100%.
Bootstrap support for D3BIN1 as seed ortholog is 100%.

Group of orthologs #820. Best score 65 bits
Score difference with first non-orthologous sequence - C.hominis:65 P.pallidum:65

Q5CLK4              	100.00%		D3BCC3              	100.00%
Bootstrap support for Q5CLK4 as seed ortholog is 100%.
Bootstrap support for D3BCC3 as seed ortholog is 100%.

Group of orthologs #821. Best score 65 bits
Score difference with first non-orthologous sequence - C.hominis:65 P.pallidum:65

Q5CMF5              	100.00%		D3BK76              	100.00%
Bootstrap support for Q5CMF5 as seed ortholog is 100%.
Bootstrap support for D3BK76 as seed ortholog is 100%.

Group of orthologs #822. Best score 65 bits
Score difference with first non-orthologous sequence - C.hominis:65 P.pallidum:19

Q5CNG7              	100.00%		D3BVF4              	100.00%
Bootstrap support for Q5CNG7 as seed ortholog is 100%.
Bootstrap support for D3BVF4 as seed ortholog is 71%.
Alternative seed ortholog is D3BRP0 (19 bits away from this cluster)

Group of orthologs #823. Best score 64 bits
Score difference with first non-orthologous sequence - C.hominis:64 P.pallidum:64

Q5CLC5              	100.00%		D3AVM4              	100.00%
                    	       		D3BHG9              	100.00%
                    	       		D3BIZ5              	19.71%
                    	       		D3BB93              	7.44%
                    	       		D3BB97              	5.83%
                    	       		D3AX42              	5.09%
Bootstrap support for Q5CLC5 as seed ortholog is 100%.
Bootstrap support for D3AVM4 as seed ortholog is 100%.
Bootstrap support for D3BHG9 as seed ortholog is 100%.

Group of orthologs #824. Best score 64 bits
Score difference with first non-orthologous sequence - C.hominis:64 P.pallidum:64

Q5CKL3              	100.00%		D3AXI6              	100.00%
Bootstrap support for Q5CKL3 as seed ortholog is 100%.
Bootstrap support for D3AXI6 as seed ortholog is 100%.

Group of orthologs #825. Best score 64 bits
Score difference with first non-orthologous sequence - C.hominis:64 P.pallidum:64

Q5CL55              	100.00%		D3AXJ9              	100.00%
Bootstrap support for Q5CL55 as seed ortholog is 100%.
Bootstrap support for D3AXJ9 as seed ortholog is 100%.

Group of orthologs #826. Best score 63 bits
Score difference with first non-orthologous sequence - C.hominis:63 P.pallidum:63

Q5CLY6              	100.00%		D3AYA2              	100.00%
                    	       		D3BHZ6              	22.09%
                    	       		D3B9H7              	21.74%
                    	       		D3BC11              	20.52%
                    	       		D3BA75              	20.17%
                    	       		D3B0A7              	20.09%
                    	       		D3BBZ1              	19.74%
                    	       		D3BBR5              	19.22%
                    	       		D3BJS4              	19.04%
                    	       		D3BJD8              	18.26%
                    	       		D3BCY0              	18.09%
                    	       		D3BTK1              	16.70%
                    	       		D3BUM3              	16.70%
                    	       		D3B123              	16.35%
                    	       		D3AZT5              	16.26%
                    	       		D3BPY1              	15.74%
                    	       		D3BRA1              	15.30%
                    	       		D3BTH3              	14.96%
                    	       		D3BJ24              	14.78%
                    	       		D3BSJ6              	14.61%
                    	       		D3BD19              	14.61%
                    	       		D3BTB8              	14.52%
                    	       		D3BAP6              	14.35%
                    	       		D3BLG6              	14.35%
                    	       		D3B5B1              	14.09%
                    	       		D3BG06              	13.83%
                    	       		D3BSM9              	13.83%
                    	       		D3B3N2              	13.74%
                    	       		D3BG25              	13.39%
                    	       		D3B9C6              	13.30%
                    	       		D3BJX2              	13.30%
                    	       		D3B104              	13.22%
                    	       		D3B9B2              	13.13%
                    	       		D3B141              	13.04%
                    	       		D3AXN7              	12.78%
                    	       		D3BPN5              	12.61%
                    	       		D3B493              	12.61%
                    	       		D3B4C0              	12.61%
                    	       		D3BUY2              	12.52%
                    	       		D3BTF1              	12.43%
                    	       		D3B2Z1              	12.43%
                    	       		D3B9D5              	12.43%
                    	       		D3BLX0              	12.26%
                    	       		D3BT11              	12.26%
                    	       		D3BAS7              	12.17%
                    	       		D3BJ68              	12.17%
                    	       		D3BCT1              	12.00%
                    	       		D3BPY0              	12.00%
                    	       		D3B0R0              	12.00%
                    	       		D3BS58              	11.74%
                    	       		D3BU96              	11.74%
                    	       		D3BTD6              	11.74%
                    	       		D3BSW8              	11.65%
                    	       		D3BUZ8              	11.57%
                    	       		D3B064              	11.48%
                    	       		D3B2D1              	11.30%
                    	       		D3BPB5              	11.30%
                    	       		D3BTB7              	11.30%
                    	       		D3BP22              	11.30%
                    	       		D3BV08              	11.30%
                    	       		D3B5H3              	11.22%
                    	       		D3BSA2              	11.22%
                    	       		D3BPB9              	11.22%
                    	       		D3B085              	11.04%
                    	       		D3B7Z0              	11.04%
                    	       		D3BV01              	10.87%
                    	       		D3BR21              	10.78%
                    	       		D3BB59              	10.70%
                    	       		D3BV00              	10.70%
                    	       		D3AXN4              	10.61%
                    	       		D3B086              	10.61%
                    	       		D3BGJ4              	10.43%
                    	       		D3BTQ3              	10.43%
                    	       		D3BD04              	10.26%
                    	       		D3B2Z3              	10.17%
                    	       		D3B9Q8              	10.09%
                    	       		D3BDS9              	10.09%
                    	       		D3BGQ2              	10.09%
                    	       		D3BJN0              	10.00%
                    	       		D3BLH8              	9.83%
                    	       		D3BS43              	9.83%
                    	       		D3BSA9              	9.83%
                    	       		D3AX11              	9.74%
                    	       		D3B2X8              	9.74%
                    	       		D3B0K4              	9.65%
                    	       		D3BKM6              	9.65%
                    	       		D3B089              	9.65%
                    	       		D3B9M4              	9.57%
                    	       		D3BSE0              	9.57%
                    	       		D3BTB6              	9.57%
                    	       		D3B2X7              	9.57%
                    	       		D3B3D3              	9.48%
                    	       		D3BBC4              	9.48%
                    	       		D3B2Y7              	9.39%
                    	       		D3BLL5              	9.30%
                    	       		D3AVJ7              	9.22%
                    	       		D3BLF7              	9.22%
                    	       		D3AZ40              	9.13%
                    	       		D3BSV1              	8.96%
                    	       		D3BTE3              	8.96%
                    	       		D3BLK2              	8.96%
                    	       		D3BRY0              	8.96%
                    	       		D3B0K2              	8.87%
                    	       		D3B2I5              	8.78%
                    	       		D3B5D2              	8.70%
                    	       		D3B5E7              	8.52%
                    	       		D3AYN7              	8.43%
                    	       		D3B2Y4              	8.26%
                    	       		D3AZ80              	8.17%
                    	       		D3AZY0              	8.09%
                    	       		D3AW63              	8.09%
                    	       		D3BPN0              	8.09%
                    	       		D3BFL7              	8.00%
                    	       		D3AZR6              	7.83%
                    	       		D3BGN5              	7.83%
                    	       		D3AX56              	7.83%
                    	       		D3BI62              	7.74%
                    	       		D3BTA6              	7.65%
                    	       		D3BF97              	7.57%
                    	       		D3BPA5              	7.57%
                    	       		D3BS59              	7.48%
                    	       		D3BSF0              	7.48%
                    	       		D3BJE7              	7.48%
                    	       		D3BFL8              	7.39%
                    	       		D3BPN1              	7.39%
                    	       		D3B7K2              	7.30%
                    	       		D3BUB2              	7.22%
                    	       		D3BR05              	7.13%
                    	       		D3BAQ2              	7.04%
                    	       		D3B717              	7.04%
                    	       		D3BGJ6              	7.04%
                    	       		D3BPA4              	7.04%
                    	       		D3BS47              	7.04%
                    	       		D3BF94              	6.96%
                    	       		D3B070              	6.78%
                    	       		D3B138              	6.70%
                    	       		D3BA07              	6.70%
                    	       		D3BEQ4              	6.70%
                    	       		D3BJQ9              	6.61%
                    	       		D3BSU7              	6.52%
                    	       		D3B9A9              	6.35%
                    	       		D3BA23              	6.26%
                    	       		D3B931              	6.17%
                    	       		D3BS05              	6.17%
                    	       		D3B099              	6.17%
                    	       		D3BSY2              	6.17%
                    	       		D3BFB5              	6.09%
                    	       		D3B011              	6.09%
                    	       		D3BA19              	6.09%
                    	       		D3B639              	6.00%
                    	       		D3BEX7              	6.00%
                    	       		D3B9A8              	5.91%
                    	       		D3BUA5              	5.91%
                    	       		D3AZT8              	5.91%
                    	       		D3B2L1              	5.91%
                    	       		D3BA17              	5.83%
                    	       		D3B049              	5.83%
                    	       		D3BG11              	5.83%
                    	       		D3BIX0              	5.74%
                    	       		D3BMA6              	5.65%
                    	       		D3B8A6              	5.57%
                    	       		D3BS57              	5.48%
                    	       		D3BS51              	5.48%
                    	       		D3BGT3              	5.30%
                    	       		D3BB74              	5.22%
                    	       		D3BSV4              	5.22%
Bootstrap support for Q5CLY6 as seed ortholog is 100%.
Bootstrap support for D3AYA2 as seed ortholog is 100%.

Group of orthologs #827. Best score 63 bits
Score difference with first non-orthologous sequence - C.hominis:63 P.pallidum:63

Q5CDR1              	100.00%		D3B641              	100.00%
Bootstrap support for Q5CDR1 as seed ortholog is 100%.
Bootstrap support for D3B641 as seed ortholog is 100%.

Group of orthologs #828. Best score 63 bits
Score difference with first non-orthologous sequence - C.hominis:63 P.pallidum:63

Q5CP92              	100.00%		D3AXC6              	100.00%
Bootstrap support for Q5CP92 as seed ortholog is 100%.
Bootstrap support for D3AXC6 as seed ortholog is 100%.

Group of orthologs #829. Best score 63 bits
Score difference with first non-orthologous sequence - C.hominis:63 P.pallidum:63

Q5CNY2              	100.00%		D3B4V8              	100.00%
Bootstrap support for Q5CNY2 as seed ortholog is 100%.
Bootstrap support for D3B4V8 as seed ortholog is 100%.

Group of orthologs #830. Best score 62 bits
Score difference with first non-orthologous sequence - C.hominis:62 P.pallidum:62

Q5CEF9              	100.00%		D3BDH2              	100.00%
Bootstrap support for Q5CEF9 as seed ortholog is 100%.
Bootstrap support for D3BDH2 as seed ortholog is 100%.

Group of orthologs #831. Best score 62 bits
Score difference with first non-orthologous sequence - C.hominis:62 P.pallidum:62

Q5CDJ0              	100.00%		D3BLH6              	100.00%
Bootstrap support for Q5CDJ0 as seed ortholog is 100%.
Bootstrap support for D3BLH6 as seed ortholog is 100%.

Group of orthologs #832. Best score 62 bits
Score difference with first non-orthologous sequence - C.hominis:62 P.pallidum:62

Q5CN98              	100.00%		D3BS88              	100.00%
Bootstrap support for Q5CN98 as seed ortholog is 100%.
Bootstrap support for D3BS88 as seed ortholog is 100%.

Group of orthologs #833. Best score 61 bits
Score difference with first non-orthologous sequence - C.hominis:61 P.pallidum:61

Q5CFU9              	100.00%		D3BA43              	100.00%
Q5CIQ2              	8.71%		
Bootstrap support for Q5CFU9 as seed ortholog is 100%.
Bootstrap support for D3BA43 as seed ortholog is 100%.

Group of orthologs #834. Best score 61 bits
Score difference with first non-orthologous sequence - C.hominis:61 P.pallidum:61

Q5CH36              	100.00%		D3BNX2              	100.00%
                    	       		D3BPA6              	14.99%
Bootstrap support for Q5CH36 as seed ortholog is 100%.
Bootstrap support for D3BNX2 as seed ortholog is 100%.

Group of orthologs #835. Best score 61 bits
Score difference with first non-orthologous sequence - C.hominis:61 P.pallidum:61

Q5CKN7              	100.00%		D3BN28              	100.00%
                    	       		D3BJB8              	7.67%
Bootstrap support for Q5CKN7 as seed ortholog is 100%.
Bootstrap support for D3BN28 as seed ortholog is 100%.

Group of orthologs #836. Best score 61 bits
Score difference with first non-orthologous sequence - C.hominis:61 P.pallidum:17

Q5CH86              	100.00%		D3B5D0              	100.00%
Bootstrap support for Q5CH86 as seed ortholog is 100%.
Bootstrap support for D3B5D0 as seed ortholog is 64%.
Alternative seed ortholog is D3BG93 (17 bits away from this cluster)

Group of orthologs #837. Best score 61 bits
Score difference with first non-orthologous sequence - C.hominis:61 P.pallidum:61

Q5CFB1              	100.00%		D3BDP9              	100.00%
Bootstrap support for Q5CFB1 as seed ortholog is 100%.
Bootstrap support for D3BDP9 as seed ortholog is 100%.

Group of orthologs #838. Best score 61 bits
Score difference with first non-orthologous sequence - C.hominis:61 P.pallidum:61

Q5CHU4              	100.00%		D3BT12              	100.00%
Bootstrap support for Q5CHU4 as seed ortholog is 100%.
Bootstrap support for D3BT12 as seed ortholog is 100%.

Group of orthologs #839. Best score 61 bits
Score difference with first non-orthologous sequence - C.hominis:61 P.pallidum:61

Q5CMB9              	100.00%		D3BPS7              	100.00%
Bootstrap support for Q5CMB9 as seed ortholog is 100%.
Bootstrap support for D3BPS7 as seed ortholog is 100%.

Group of orthologs #840. Best score 60 bits
Score difference with first non-orthologous sequence - C.hominis:60 P.pallidum:3

Q5CEN9              	100.00%		D3BKS2              	100.00%
                    	       		D3AYJ4              	6.37%
Bootstrap support for Q5CEN9 as seed ortholog is 100%.
Bootstrap support for D3BKS2 as seed ortholog is 64%.
Alternative seed ortholog is D3BMD7 (3 bits away from this cluster)

Group of orthologs #841. Best score 60 bits
Score difference with first non-orthologous sequence - C.hominis:60 P.pallidum:60

Q5CJ04              	100.00%		D3BKK9              	100.00%
Bootstrap support for Q5CJ04 as seed ortholog is 100%.
Bootstrap support for D3BKK9 as seed ortholog is 100%.

Group of orthologs #842. Best score 60 bits
Score difference with first non-orthologous sequence - C.hominis:60 P.pallidum:60

Q5CMZ0              	100.00%		D3BM22              	100.00%
Bootstrap support for Q5CMZ0 as seed ortholog is 100%.
Bootstrap support for D3BM22 as seed ortholog is 100%.

Group of orthologs #843. Best score 60 bits
Score difference with first non-orthologous sequence - C.hominis:60 P.pallidum:60

Q5CPB7              	100.00%		D3BKZ5              	100.00%
Bootstrap support for Q5CPB7 as seed ortholog is 100%.
Bootstrap support for D3BKZ5 as seed ortholog is 100%.

Group of orthologs #844. Best score 60 bits
Score difference with first non-orthologous sequence - C.hominis:60 P.pallidum:60

Q5CJ88              	100.00%		D3BT01              	100.00%
Bootstrap support for Q5CJ88 as seed ortholog is 100%.
Bootstrap support for D3BT01 as seed ortholog is 100%.

Group of orthologs #845. Best score 59 bits
Score difference with first non-orthologous sequence - C.hominis:59 P.pallidum:59

Q5CHC2              	100.00%		D3BSZ3              	100.00%
                    	       		D3BFK9              	38.23%
                    	       		D3BCF0              	5.31%
Bootstrap support for Q5CHC2 as seed ortholog is 100%.
Bootstrap support for D3BSZ3 as seed ortholog is 100%.

Group of orthologs #846. Best score 59 bits
Score difference with first non-orthologous sequence - C.hominis:59 P.pallidum:59

Q5CJ28              	100.00%		D3B7W9              	100.00%
Bootstrap support for Q5CJ28 as seed ortholog is 100%.
Bootstrap support for D3B7W9 as seed ortholog is 100%.

Group of orthologs #847. Best score 58 bits
Score difference with first non-orthologous sequence - C.hominis:58 P.pallidum:58

Q5CF63              	100.00%		D3BMP1              	100.00%
                    	       		D3BQA0              	15.75%
                    	       		D3B9P6              	14.67%
Bootstrap support for Q5CF63 as seed ortholog is 100%.
Bootstrap support for D3BMP1 as seed ortholog is 100%.

Group of orthologs #848. Best score 58 bits
Score difference with first non-orthologous sequence - C.hominis:58 P.pallidum:58

Q5CF86              	100.00%		D3BDZ5              	100.00%
Bootstrap support for Q5CF86 as seed ortholog is 100%.
Bootstrap support for D3BDZ5 as seed ortholog is 100%.

Group of orthologs #849. Best score 57 bits
Score difference with first non-orthologous sequence - C.hominis:57 P.pallidum:57

Q5CNS6              	100.00%		D3BFU7              	100.00%
                    	       		D3AWD8              	18.55%
                    	       		D3B7N4              	8.06%
                    	       		D3BM15              	5.65%
Bootstrap support for Q5CNS6 as seed ortholog is 100%.
Bootstrap support for D3BFU7 as seed ortholog is 100%.

Group of orthologs #850. Best score 57 bits
Score difference with first non-orthologous sequence - C.hominis:57 P.pallidum:57

Q5CFL2              	100.00%		D3B6Z4              	100.00%
Bootstrap support for Q5CFL2 as seed ortholog is 100%.
Bootstrap support for D3B6Z4 as seed ortholog is 100%.

Group of orthologs #851. Best score 57 bits
Score difference with first non-orthologous sequence - C.hominis:57 P.pallidum:57

Q5CGZ3              	100.00%		D3B7A4              	100.00%
Bootstrap support for Q5CGZ3 as seed ortholog is 100%.
Bootstrap support for D3B7A4 as seed ortholog is 100%.

Group of orthologs #852. Best score 57 bits
Score difference with first non-orthologous sequence - C.hominis:57 P.pallidum:57

Q5CMR1              	100.00%		D3B406              	100.00%
Bootstrap support for Q5CMR1 as seed ortholog is 100%.
Bootstrap support for D3B406 as seed ortholog is 100%.

Group of orthologs #853. Best score 57 bits
Score difference with first non-orthologous sequence - C.hominis:57 P.pallidum:57

Q5CFT6              	100.00%		D3BCL9              	100.00%
Bootstrap support for Q5CFT6 as seed ortholog is 100%.
Bootstrap support for D3BCL9 as seed ortholog is 100%.

Group of orthologs #854. Best score 57 bits
Score difference with first non-orthologous sequence - C.hominis:57 P.pallidum:57

Q5CKM0              	100.00%		D3BCF6              	100.00%
Bootstrap support for Q5CKM0 as seed ortholog is 100%.
Bootstrap support for D3BCF6 as seed ortholog is 100%.

Group of orthologs #855. Best score 57 bits
Score difference with first non-orthologous sequence - C.hominis:57 P.pallidum:57

Q5CMV7              	100.00%		D3BQT8              	100.00%
Bootstrap support for Q5CMV7 as seed ortholog is 100%.
Bootstrap support for D3BQT8 as seed ortholog is 100%.

Group of orthologs #856. Best score 56 bits
Score difference with first non-orthologous sequence - C.hominis:56 P.pallidum:56

Q5CH89              	100.00%		D3BCT7              	100.00%
Bootstrap support for Q5CH89 as seed ortholog is 100%.
Bootstrap support for D3BCT7 as seed ortholog is 100%.

Group of orthologs #857. Best score 55 bits
Score difference with first non-orthologous sequence - C.hominis:55 P.pallidum:55

Q5CI56              	100.00%		D3BPM3              	100.00%
                    	       		D3BBL7              	30.11%
Bootstrap support for Q5CI56 as seed ortholog is 100%.
Bootstrap support for D3BPM3 as seed ortholog is 100%.

Group of orthologs #858. Best score 55 bits
Score difference with first non-orthologous sequence - C.hominis:55 P.pallidum:6

Q5CEH5              	100.00%		D3B3Z9              	100.00%
Bootstrap support for Q5CEH5 as seed ortholog is 100%.
Bootstrap support for D3B3Z9 as seed ortholog is 64%.
Alternative seed ortholog is D3BEB9 (6 bits away from this cluster)

Group of orthologs #859. Best score 54 bits
Score difference with first non-orthologous sequence - C.hominis:11 P.pallidum:54

Q5CN82              	100.00%		D3AX96              	100.00%
Q5CMJ0              	12.06%		
Bootstrap support for Q5CN82 as seed ortholog is 54%.
Alternative seed ortholog is Q5CM74 (11 bits away from this cluster)
Bootstrap support for D3AX96 as seed ortholog is 100%.

Group of orthologs #860. Best score 54 bits
Score difference with first non-orthologous sequence - C.hominis:54 P.pallidum:54

Q5CGK2              	100.00%		D3BH64              	100.00%
Bootstrap support for Q5CGK2 as seed ortholog is 100%.
Bootstrap support for D3BH64 as seed ortholog is 100%.

Group of orthologs #861. Best score 54 bits
Score difference with first non-orthologous sequence - C.hominis:54 P.pallidum:54

Q5CL07              	100.00%		D3BME5              	100.00%
Bootstrap support for Q5CL07 as seed ortholog is 100%.
Bootstrap support for D3BME5 as seed ortholog is 100%.

Group of orthologs #862. Best score 54 bits
Score difference with first non-orthologous sequence - C.hominis:54 P.pallidum:54

Q5CMV0              	100.00%		D3BU38              	100.00%
Bootstrap support for Q5CMV0 as seed ortholog is 100%.
Bootstrap support for D3BU38 as seed ortholog is 100%.

Group of orthologs #863. Best score 53 bits
Score difference with first non-orthologous sequence - C.hominis:53 P.pallidum:53

Q5CEG1              	100.00%		D3B7W7              	100.00%
Bootstrap support for Q5CEG1 as seed ortholog is 100%.
Bootstrap support for D3B7W7 as seed ortholog is 100%.

Group of orthologs #864. Best score 53 bits
Score difference with first non-orthologous sequence - C.hominis:53 P.pallidum:53

Q5CDF3              	100.00%		D3BFL2              	100.00%
Bootstrap support for Q5CDF3 as seed ortholog is 100%.
Bootstrap support for D3BFL2 as seed ortholog is 100%.

Group of orthologs #865. Best score 52 bits
Score difference with first non-orthologous sequence - C.hominis:52 P.pallidum:52

Q5CFE9              	100.00%		D3BNZ0              	100.00%
Bootstrap support for Q5CFE9 as seed ortholog is 100%.
Bootstrap support for D3BNZ0 as seed ortholog is 100%.

Group of orthologs #866. Best score 52 bits
Score difference with first non-orthologous sequence - C.hominis:52 P.pallidum:52

Q5CKX4              	100.00%		D3BQ54              	100.00%
Bootstrap support for Q5CKX4 as seed ortholog is 100%.
Bootstrap support for D3BQ54 as seed ortholog is 100%.

Group of orthologs #867. Best score 52 bits
Score difference with first non-orthologous sequence - C.hominis:52 P.pallidum:52

Q5CP79              	100.00%		D3BUE2              	100.00%
Bootstrap support for Q5CP79 as seed ortholog is 100%.
Bootstrap support for D3BUE2 as seed ortholog is 100%.

Group of orthologs #868. Best score 51 bits
Score difference with first non-orthologous sequence - C.hominis:51 P.pallidum:51

Q5CMR0              	100.00%		D3BEJ0              	100.00%
Bootstrap support for Q5CMR0 as seed ortholog is 100%.
Bootstrap support for D3BEJ0 as seed ortholog is 100%.

Group of orthologs #869. Best score 51 bits
Score difference with first non-orthologous sequence - C.hominis:51 P.pallidum:51

Q5CN51              	100.00%		D3BSK2              	100.00%
Bootstrap support for Q5CN51 as seed ortholog is 100%.
Bootstrap support for D3BSK2 as seed ortholog is 100%.

Group of orthologs #870. Best score 50 bits
Score difference with first non-orthologous sequence - C.hominis:50 P.pallidum:50

Q5CKR3              	100.00%		D3BAS9              	100.00%
Bootstrap support for Q5CKR3 as seed ortholog is 100%.
Bootstrap support for D3BAS9 as seed ortholog is 100%.

Group of orthologs #871. Best score 49 bits
Score difference with first non-orthologous sequence - C.hominis:49 P.pallidum:49

Q5CI07              	100.00%		D3BEL8              	100.00%
                    	       		D3BDZ6              	19.93%
                    	       		D3BNT6              	11.73%
                    	       		D3BIS5              	5.36%
Bootstrap support for Q5CI07 as seed ortholog is 100%.
Bootstrap support for D3BEL8 as seed ortholog is 100%.

Group of orthologs #872. Best score 49 bits
Score difference with first non-orthologous sequence - C.hominis:49 P.pallidum:49

Q5CE98              	100.00%		D3BG74              	100.00%
Bootstrap support for Q5CE98 as seed ortholog is 100%.
Bootstrap support for D3BG74 as seed ortholog is 100%.

Group of orthologs #873. Best score 49 bits
Score difference with first non-orthologous sequence - C.hominis:49 P.pallidum:49

Q5CEN6              	100.00%		D3BNC8              	100.00%
Bootstrap support for Q5CEN6 as seed ortholog is 100%.
Bootstrap support for D3BNC8 as seed ortholog is 100%.

Group of orthologs #874. Best score 48 bits
Score difference with first non-orthologous sequence - C.hominis:48 P.pallidum:48

Q5CII9              	100.00%		D3B7L8              	100.00%
Q5CIJ0              	53.33%		D3BQC7              	47.80%
                    	       		D3BR71              	47.47%
Bootstrap support for Q5CII9 as seed ortholog is 100%.
Bootstrap support for D3B7L8 as seed ortholog is 100%.

Group of orthologs #875. Best score 47 bits
Score difference with first non-orthologous sequence - C.hominis:47 P.pallidum:47

Q5CJG8              	100.00%		D3BBT7              	100.00%
Bootstrap support for Q5CJG8 as seed ortholog is 100%.
Bootstrap support for D3BBT7 as seed ortholog is 100%.

Group of orthologs #876. Best score 47 bits
Score difference with first non-orthologous sequence - C.hominis:47 P.pallidum:47

Q5CMT8              	100.00%		D3BR17              	100.00%
Bootstrap support for Q5CMT8 as seed ortholog is 100%.
Bootstrap support for D3BR17 as seed ortholog is 100%.

Group of orthologs #877. Best score 45 bits
Score difference with first non-orthologous sequence - C.hominis:45 P.pallidum:45

Q5CNK4              	100.00%		D3BPP1              	100.00%
Bootstrap support for Q5CNK4 as seed ortholog is 100%.
Bootstrap support for D3BPP1 as seed ortholog is 100%.

Group of orthologs #878. Best score 44 bits
Score difference with first non-orthologous sequence - C.hominis:44 P.pallidum:3

Q5CLJ8              	100.00%		D3BUN0              	100.00%
Bootstrap support for Q5CLJ8 as seed ortholog is 100%.
Bootstrap support for D3BUN0 as seed ortholog is 55%.
Alternative seed ortholog is D3B0J7 (3 bits away from this cluster)

Group of orthologs #879. Best score 42 bits
Score difference with first non-orthologous sequence - C.hominis:42 P.pallidum:42

Q5CEG2              	100.00%		D3BE41              	100.00%
Bootstrap support for Q5CEG2 as seed ortholog is 100%.
Bootstrap support for D3BE41 as seed ortholog is 100%.

Group of orthologs #880. Best score 41 bits
Score difference with first non-orthologous sequence - C.hominis:41 P.pallidum:41

Q5CMT6              	100.00%		D3AX20              	100.00%
Bootstrap support for Q5CMT6 as seed ortholog is 100%.
Bootstrap support for D3AX20 as seed ortholog is 100%.

Group of orthologs #881. Best score 41 bits
Score difference with first non-orthologous sequence - C.hominis:41 P.pallidum:41

Q5CIP3              	100.00%		D3B807              	100.00%
Bootstrap support for Q5CIP3 as seed ortholog is 100%.
Bootstrap support for D3B807 as seed ortholog is 100%.