###################################
183 groups of orthologs
286 in-paralogs from C.gigas
186 in-paralogs from C.trachomatis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 937 bits
Score difference with first non-orthologous sequence - C.gigas:712 C.trachomatis:937

K1PJF4              	100.00%		O84022              	100.00%
Bootstrap support for K1PJF4 as seed ortholog is 100%.
Bootstrap support for O84022 as seed ortholog is 100%.

Group of orthologs #2. Best score 851 bits
Score difference with first non-orthologous sequence - C.gigas:851 C.trachomatis:851

K1Q1A5              	100.00%		O84250              	100.00%
K1Q948              	41.08%		
Bootstrap support for K1Q1A5 as seed ortholog is 100%.
Bootstrap support for O84250 as seed ortholog is 100%.

Group of orthologs #3. Best score 807 bits
Score difference with first non-orthologous sequence - C.gigas:321 C.trachomatis:807

K1P0H5              	100.00%		O84834              	100.00%
Bootstrap support for K1P0H5 as seed ortholog is 100%.
Bootstrap support for O84834 as seed ortholog is 100%.

Group of orthologs #4. Best score 706 bits
Score difference with first non-orthologous sequence - C.gigas:153 C.trachomatis:706

K1P9D0              	100.00%		P17821              	100.00%
Bootstrap support for K1P9D0 as seed ortholog is 99%.
Bootstrap support for P17821 as seed ortholog is 100%.

Group of orthologs #5. Best score 683 bits
Score difference with first non-orthologous sequence - C.gigas:211 C.trachomatis:683

K1REJ2              	100.00%		O84348              	100.00%
Bootstrap support for K1REJ2 as seed ortholog is 99%.
Bootstrap support for O84348 as seed ortholog is 100%.

Group of orthologs #6. Best score 595 bits
Score difference with first non-orthologous sequence - C.gigas:595 C.trachomatis:595

K1Q760              	100.00%		O84716              	100.00%
K1QEA6              	19.64%		
Bootstrap support for K1Q760 as seed ortholog is 100%.
Bootstrap support for O84716 as seed ortholog is 100%.

Group of orthologs #7. Best score 537 bits
Score difference with first non-orthologous sequence - C.gigas:374 C.trachomatis:537

K1QCA7              	100.00%		O84304              	100.00%
K1PNV7              	27.06%		
Bootstrap support for K1QCA7 as seed ortholog is 100%.
Bootstrap support for O84304 as seed ortholog is 100%.

Group of orthologs #8. Best score 533 bits
Score difference with first non-orthologous sequence - C.gigas:109 C.trachomatis:533

K1PLM6              	100.00%		O84848              	100.00%
Bootstrap support for K1PLM6 as seed ortholog is 99%.
Bootstrap support for O84848 as seed ortholog is 100%.

Group of orthologs #9. Best score 529 bits
Score difference with first non-orthologous sequence - C.gigas:101 C.trachomatis:529

K1QI96              	100.00%		O84211              	100.00%
Bootstrap support for K1QI96 as seed ortholog is 99%.
Bootstrap support for O84211 as seed ortholog is 100%.

Group of orthologs #10. Best score 521 bits
Score difference with first non-orthologous sequence - C.gigas:386 C.trachomatis:521

K1RKF7              	100.00%		O84067              	100.00%
Bootstrap support for K1RKF7 as seed ortholog is 100%.
Bootstrap support for O84067 as seed ortholog is 100%.

Group of orthologs #11. Best score 520 bits
Score difference with first non-orthologous sequence - C.gigas:307 C.trachomatis:351

K1Q5G6              	100.00%		P0C0Z7              	100.00%
Bootstrap support for K1Q5G6 as seed ortholog is 100%.
Bootstrap support for P0C0Z7 as seed ortholog is 100%.

Group of orthologs #12. Best score 500 bits
Score difference with first non-orthologous sequence - C.gigas:148 C.trachomatis:500

K1QST9              	100.00%		O84444              	100.00%
Bootstrap support for K1QST9 as seed ortholog is 99%.
Bootstrap support for O84444 as seed ortholog is 100%.

Group of orthologs #13. Best score 487 bits
Score difference with first non-orthologous sequence - C.gigas:487 C.trachomatis:487

K1RH70              	100.00%		O84066              	100.00%
Bootstrap support for K1RH70 as seed ortholog is 100%.
Bootstrap support for O84066 as seed ortholog is 100%.

Group of orthologs #14. Best score 482 bits
Score difference with first non-orthologous sequence - C.gigas:482 C.trachomatis:482

K1R295              	100.00%		O84863              	100.00%
Bootstrap support for K1R295 as seed ortholog is 100%.
Bootstrap support for O84863 as seed ortholog is 100%.

Group of orthologs #15. Best score 459 bits
Score difference with first non-orthologous sequence - C.gigas:459 C.trachomatis:459

K1PL35              	100.00%		O84057              	100.00%
K1QFJ4              	8.08%		
Bootstrap support for K1PL35 as seed ortholog is 100%.
Bootstrap support for O84057 as seed ortholog is 100%.

Group of orthologs #16. Best score 436 bits
Score difference with first non-orthologous sequence - C.gigas:436 C.trachomatis:436

K1R0P8              	100.00%		Q59321              	100.00%
Bootstrap support for K1R0P8 as seed ortholog is 100%.
Bootstrap support for Q59321 as seed ortholog is 100%.

Group of orthologs #17. Best score 432 bits
Score difference with first non-orthologous sequence - C.gigas:432 C.trachomatis:432

K1RGG1              	100.00%		O84754              	100.00%
K1QT13              	6.82%		
Bootstrap support for K1RGG1 as seed ortholog is 100%.
Bootstrap support for O84754 as seed ortholog is 100%.

Group of orthologs #18. Best score 415 bits
Score difference with first non-orthologous sequence - C.gigas:415 C.trachomatis:415

K1Q6U6              	100.00%		O84787              	100.00%
Bootstrap support for K1Q6U6 as seed ortholog is 100%.
Bootstrap support for O84787 as seed ortholog is 100%.

Group of orthologs #19. Best score 401 bits
Score difference with first non-orthologous sequence - C.gigas:28 C.trachomatis:401

K1PL73              	100.00%		O84546              	100.00%
Bootstrap support for K1PL73 as seed ortholog is 70%.
Alternative seed ortholog is K1RHA7 (28 bits away from this cluster)
Bootstrap support for O84546 as seed ortholog is 100%.

Group of orthologs #20. Best score 386 bits
Score difference with first non-orthologous sequence - C.gigas:164 C.trachomatis:386

K1PAY7              	100.00%		O84126              	100.00%
Bootstrap support for K1PAY7 as seed ortholog is 99%.
Bootstrap support for O84126 as seed ortholog is 100%.

Group of orthologs #21. Best score 379 bits
Score difference with first non-orthologous sequence - C.gigas:25 C.trachomatis:379

K1Q5L6              	100.00%		O84500              	100.00%
Bootstrap support for K1Q5L6 as seed ortholog is 66%.
Alternative seed ortholog is K1Q3B5 (25 bits away from this cluster)
Bootstrap support for O84500 as seed ortholog is 100%.

Group of orthologs #22. Best score 379 bits
Score difference with first non-orthologous sequence - C.gigas:379 C.trachomatis:379

K1Q9V3              	100.00%		O84310              	100.00%
Bootstrap support for K1Q9V3 as seed ortholog is 100%.
Bootstrap support for O84310 as seed ortholog is 100%.

Group of orthologs #23. Best score 372 bits
Score difference with first non-orthologous sequence - C.gigas:372 C.trachomatis:372

K1R5C2              	100.00%		O84849              	100.00%
Bootstrap support for K1R5C2 as seed ortholog is 100%.
Bootstrap support for O84849 as seed ortholog is 100%.

Group of orthologs #24. Best score 369 bits
Score difference with first non-orthologous sequence - C.gigas:42 C.trachomatis:369

K1QPP2              	100.00%		P0CD71              	100.00%
Bootstrap support for K1QPP2 as seed ortholog is 88%.
Bootstrap support for P0CD71 as seed ortholog is 100%.

Group of orthologs #25. Best score 367 bits
Score difference with first non-orthologous sequence - C.gigas:367 C.trachomatis:367

K1Q350              	100.00%		P0CE13              	100.00%
Bootstrap support for K1Q350 as seed ortholog is 100%.
Bootstrap support for P0CE13 as seed ortholog is 100%.

Group of orthologs #26. Best score 322 bits
Score difference with first non-orthologous sequence - C.gigas:322 C.trachomatis:322

K1Q3Z7              	100.00%		P0CD78              	100.00%
Bootstrap support for K1Q3Z7 as seed ortholog is 100%.
Bootstrap support for P0CD78 as seed ortholog is 100%.

Group of orthologs #27. Best score 306 bits
Score difference with first non-orthologous sequence - C.gigas:198 C.trachomatis:306

K1QKI4              	100.00%		O84786              	100.00%
Bootstrap support for K1QKI4 as seed ortholog is 99%.
Bootstrap support for O84786 as seed ortholog is 100%.

Group of orthologs #28. Best score 302 bits
Score difference with first non-orthologous sequence - C.gigas:239 C.trachomatis:302

K1PR08              	100.00%		O84775              	100.00%
Bootstrap support for K1PR08 as seed ortholog is 100%.
Bootstrap support for O84775 as seed ortholog is 100%.

Group of orthologs #29. Best score 301 bits
Score difference with first non-orthologous sequence - C.gigas:301 C.trachomatis:301

K1RFG9              	100.00%		O84451              	100.00%
Bootstrap support for K1RFG9 as seed ortholog is 100%.
Bootstrap support for O84451 as seed ortholog is 100%.

Group of orthologs #30. Best score 300 bits
Score difference with first non-orthologous sequence - C.gigas:116 C.trachomatis:300

K1Q329              	100.00%		O84248              	100.00%
K1QWY0              	37.35%		
Bootstrap support for K1Q329 as seed ortholog is 99%.
Bootstrap support for O84248 as seed ortholog is 100%.

Group of orthologs #31. Best score 292 bits
Score difference with first non-orthologous sequence - C.gigas:106 C.trachomatis:292

K1S4I2              	100.00%		O84711              	100.00%
K1QV73              	5.91%		
Bootstrap support for K1S4I2 as seed ortholog is 98%.
Bootstrap support for O84711 as seed ortholog is 100%.

Group of orthologs #32. Best score 291 bits
Score difference with first non-orthologous sequence - C.gigas:118 C.trachomatis:291

K1Q9T0              	100.00%		O84006              	100.00%
Bootstrap support for K1Q9T0 as seed ortholog is 99%.
Bootstrap support for O84006 as seed ortholog is 100%.

Group of orthologs #33. Best score 291 bits
Score difference with first non-orthologous sequence - C.gigas:291 C.trachomatis:291

K1QYG7              	100.00%		O84823              	100.00%
Bootstrap support for K1QYG7 as seed ortholog is 100%.
Bootstrap support for O84823 as seed ortholog is 100%.

Group of orthologs #34. Best score 290 bits
Score difference with first non-orthologous sequence - C.gigas:24 C.trachomatis:290

K1QYI9              	100.00%		O84460              	100.00%
Bootstrap support for K1QYI9 as seed ortholog is 73%.
Alternative seed ortholog is K1QAY8 (24 bits away from this cluster)
Bootstrap support for O84460 as seed ortholog is 100%.

Group of orthologs #35. Best score 289 bits
Score difference with first non-orthologous sequence - C.gigas:40 C.trachomatis:289

K1PPF6              	100.00%		O84797              	100.00%
Bootstrap support for K1PPF6 as seed ortholog is 76%.
Bootstrap support for O84797 as seed ortholog is 100%.

Group of orthologs #36. Best score 289 bits
Score difference with first non-orthologous sequence - C.gigas:94 C.trachomatis:289

K1R6N7              	100.00%		O84289              	100.00%
Bootstrap support for K1R6N7 as seed ortholog is 98%.
Bootstrap support for O84289 as seed ortholog is 100%.

Group of orthologs #37. Best score 286 bits
Score difference with first non-orthologous sequence - C.gigas:128 C.trachomatis:286

K1PNX0              	100.00%		O84035              	100.00%
Bootstrap support for K1PNX0 as seed ortholog is 99%.
Bootstrap support for O84035 as seed ortholog is 100%.

Group of orthologs #38. Best score 281 bits
Score difference with first non-orthologous sequence - C.gigas:281 C.trachomatis:281

K1QVK0              	100.00%		O84315              	100.00%
Bootstrap support for K1QVK0 as seed ortholog is 100%.
Bootstrap support for O84315 as seed ortholog is 100%.

Group of orthologs #39. Best score 280 bits
Score difference with first non-orthologous sequence - C.gigas:114 C.trachomatis:280

K1QFC1              	100.00%		O84234              	100.00%
Bootstrap support for K1QFC1 as seed ortholog is 99%.
Bootstrap support for O84234 as seed ortholog is 100%.

Group of orthologs #40. Best score 278 bits
Score difference with first non-orthologous sequence - C.gigas:278 C.trachomatis:278

K1PJ46              	100.00%		P0CE21              	100.00%
K1RFW7              	38.19%		
K1QRW8              	23.32%		
Bootstrap support for K1PJ46 as seed ortholog is 100%.
Bootstrap support for P0CE21 as seed ortholog is 100%.

Group of orthologs #41. Best score 278 bits
Score difference with first non-orthologous sequence - C.gigas:278 C.trachomatis:278

K1QH58              	100.00%		O84829              	100.00%
Bootstrap support for K1QH58 as seed ortholog is 100%.
Bootstrap support for O84829 as seed ortholog is 100%.

Group of orthologs #42. Best score 272 bits
Score difference with first non-orthologous sequence - C.gigas:13 C.trachomatis:272

K1Q0R2              	100.00%		O84381              	100.00%
Bootstrap support for K1Q0R2 as seed ortholog is 34%.
Alternative seed ortholog is K1PU26 (13 bits away from this cluster)
Bootstrap support for O84381 as seed ortholog is 100%.

Group of orthologs #43. Best score 270 bits
Score difference with first non-orthologous sequence - C.gigas:270 C.trachomatis:270

K1PM29              	100.00%		O84188              	100.00%
K1PU79              	68.27%		
Bootstrap support for K1PM29 as seed ortholog is 100%.
Bootstrap support for O84188 as seed ortholog is 100%.

Group of orthologs #44. Best score 264 bits
Score difference with first non-orthologous sequence - C.gigas:264 C.trachomatis:215

K1RN82              	100.00%		P36431              	100.00%
Bootstrap support for K1RN82 as seed ortholog is 100%.
Bootstrap support for P36431 as seed ortholog is 99%.

Group of orthologs #45. Best score 262 bits
Score difference with first non-orthologous sequence - C.gigas:262 C.trachomatis:262

K1PTI6              	100.00%		P0CD72              	100.00%
K1PLN6              	50.29%		
Bootstrap support for K1PTI6 as seed ortholog is 100%.
Bootstrap support for P0CD72 as seed ortholog is 100%.

Group of orthologs #46. Best score 259 bits
Score difference with first non-orthologous sequence - C.gigas:138 C.trachomatis:114

K1R8I8              	100.00%		O84249              	100.00%
Bootstrap support for K1R8I8 as seed ortholog is 95%.
Bootstrap support for O84249 as seed ortholog is 99%.

Group of orthologs #47. Best score 258 bits
Score difference with first non-orthologous sequence - C.gigas:258 C.trachomatis:258

K1QCQ5              	100.00%		O84828              	100.00%
K1QRK9              	8.63%		
Bootstrap support for K1QCQ5 as seed ortholog is 100%.
Bootstrap support for O84828 as seed ortholog is 100%.

Group of orthologs #48. Best score 257 bits
Score difference with first non-orthologous sequence - C.gigas:194 C.trachomatis:257

K1QI28              	100.00%		O84309              	100.00%
Bootstrap support for K1QI28 as seed ortholog is 100%.
Bootstrap support for O84309 as seed ortholog is 100%.

Group of orthologs #49. Best score 251 bits
Score difference with first non-orthologous sequence - C.gigas:251 C.trachomatis:251

K1QCY0              	100.00%		O84439              	100.00%
K1RD83              	46.91%		
Bootstrap support for K1QCY0 as seed ortholog is 100%.
Bootstrap support for O84439 as seed ortholog is 100%.

Group of orthologs #50. Best score 250 bits
Score difference with first non-orthologous sequence - C.gigas:250 C.trachomatis:250

K1R8Y1              	100.00%		O84094              	100.00%
Bootstrap support for K1R8Y1 as seed ortholog is 100%.
Bootstrap support for O84094 as seed ortholog is 100%.

Group of orthologs #51. Best score 247 bits
Score difference with first non-orthologous sequence - C.gigas:122 C.trachomatis:80

K1RJ48              	100.00%		O84058              	100.00%
Bootstrap support for K1RJ48 as seed ortholog is 99%.
Bootstrap support for O84058 as seed ortholog is 98%.

Group of orthologs #52. Best score 244 bits
Score difference with first non-orthologous sequence - C.gigas:152 C.trachomatis:244

K1R373              	100.00%		O84352              	100.00%
K1Q0R4              	12.74%		
Bootstrap support for K1R373 as seed ortholog is 100%.
Bootstrap support for O84352 as seed ortholog is 100%.

Group of orthologs #53. Best score 243 bits
Score difference with first non-orthologous sequence - C.gigas:243 C.trachomatis:243

K1PYM3              	100.00%		O84698              	100.00%
Bootstrap support for K1PYM3 as seed ortholog is 100%.
Bootstrap support for O84698 as seed ortholog is 100%.

Group of orthologs #54. Best score 242 bits
Score difference with first non-orthologous sequence - C.gigas:242 C.trachomatis:242

K1R2Q9              	100.00%		O84642              	100.00%
K1R083              	48.85%		
K1RAL0              	19.01%		
Bootstrap support for K1R2Q9 as seed ortholog is 100%.
Bootstrap support for O84642 as seed ortholog is 100%.

Group of orthologs #55. Best score 237 bits
Score difference with first non-orthologous sequence - C.gigas:237 C.trachomatis:237

K1QS45              	100.00%		O84065              	100.00%
Bootstrap support for K1QS45 as seed ortholog is 100%.
Bootstrap support for O84065 as seed ortholog is 100%.

Group of orthologs #56. Best score 236 bits
Score difference with first non-orthologous sequence - C.gigas:24 C.trachomatis:236

K1Q095              	100.00%		O84596              	100.00%
Bootstrap support for K1Q095 as seed ortholog is 78%.
Bootstrap support for O84596 as seed ortholog is 100%.

Group of orthologs #57. Best score 232 bits
Score difference with first non-orthologous sequence - C.gigas:232 C.trachomatis:232

K1PAJ7              	100.00%		P0CE09              	100.00%
K1PKY6              	8.13%		
Bootstrap support for K1PAJ7 as seed ortholog is 100%.
Bootstrap support for P0CE09 as seed ortholog is 100%.

Group of orthologs #58. Best score 230 bits
Score difference with first non-orthologous sequence - C.gigas:230 C.trachomatis:230

K1PTC6              	100.00%		O84562              	100.00%
K1RDX0              	17.02%		
Bootstrap support for K1PTC6 as seed ortholog is 100%.
Bootstrap support for O84562 as seed ortholog is 100%.

Group of orthologs #59. Best score 227 bits
Score difference with first non-orthologous sequence - C.gigas:153 C.trachomatis:183

K1R3H0              	100.00%		O84338              	100.00%
Bootstrap support for K1R3H0 as seed ortholog is 100%.
Bootstrap support for O84338 as seed ortholog is 100%.

Group of orthologs #60. Best score 226 bits
Score difference with first non-orthologous sequence - C.gigas:226 C.trachomatis:163

K1RRS8              	100.00%		O84297              	100.00%
Bootstrap support for K1RRS8 as seed ortholog is 100%.
Bootstrap support for O84297 as seed ortholog is 99%.

Group of orthologs #61. Best score 225 bits
Score difference with first non-orthologous sequence - C.gigas:7 C.trachomatis:225

K1P412              	100.00%		O84049              	100.00%
Bootstrap support for K1P412 as seed ortholog is 56%.
Alternative seed ortholog is K1QHU6 (7 bits away from this cluster)
Bootstrap support for O84049 as seed ortholog is 100%.

Group of orthologs #62. Best score 224 bits
Score difference with first non-orthologous sequence - C.gigas:224 C.trachomatis:61

K1QJK5              	100.00%		O84026              	100.00%
Bootstrap support for K1QJK5 as seed ortholog is 100%.
Bootstrap support for O84026 as seed ortholog is 97%.

Group of orthologs #63. Best score 223 bits
Score difference with first non-orthologous sequence - C.gigas:82 C.trachomatis:223

K1QQZ1              	100.00%		O84345              	100.00%
Bootstrap support for K1QQZ1 as seed ortholog is 97%.
Bootstrap support for O84345 as seed ortholog is 100%.

Group of orthologs #64. Best score 222 bits
Score difference with first non-orthologous sequence - C.gigas:25 C.trachomatis:222

K1R3Z0              	100.00%		O84266              	100.00%
Bootstrap support for K1R3Z0 as seed ortholog is 65%.
Alternative seed ortholog is K1Q6S5 (25 bits away from this cluster)
Bootstrap support for O84266 as seed ortholog is 100%.

Group of orthologs #65. Best score 222 bits
Score difference with first non-orthologous sequence - C.gigas:222 C.trachomatis:91

K1S2S8              	100.00%		O84028              	100.00%
Bootstrap support for K1S2S8 as seed ortholog is 100%.
Bootstrap support for O84028 as seed ortholog is 99%.

Group of orthologs #66. Best score 221 bits
Score difference with first non-orthologous sequence - C.gigas:124 C.trachomatis:102

K1P3L8              	100.00%		O84406              	100.00%
K1R8Z9              	48.87%		
K1RCA4              	31.33%		
K1PHK7              	29.95%		
K1RD14              	8.15%		
K1Q6H4              	7.27%		
K1R086              	6.02%		
Bootstrap support for K1P3L8 as seed ortholog is 99%.
Bootstrap support for O84406 as seed ortholog is 99%.

Group of orthologs #67. Best score 219 bits
Score difference with first non-orthologous sequence - C.gigas:39 C.trachomatis:219

K1QWH6              	100.00%		O84613              	100.00%
Bootstrap support for K1QWH6 as seed ortholog is 90%.
Bootstrap support for O84613 as seed ortholog is 100%.

Group of orthologs #68. Best score 218 bits
Score difference with first non-orthologous sequence - C.gigas:45 C.trachomatis:218

K1PVP2              	100.00%		O84732              	100.00%
K1PPD4              	99.77%		
K1QYC3              	54.73%		
Bootstrap support for K1PVP2 as seed ortholog is 84%.
Bootstrap support for O84732 as seed ortholog is 100%.

Group of orthologs #69. Best score 218 bits
Score difference with first non-orthologous sequence - C.gigas:218 C.trachomatis:218

K1QGQ5              	100.00%		O84296              	100.00%
Bootstrap support for K1QGQ5 as seed ortholog is 100%.
Bootstrap support for O84296 as seed ortholog is 100%.

Group of orthologs #70. Best score 213 bits
Score difference with first non-orthologous sequence - C.gigas:213 C.trachomatis:213

K1QQ74              	100.00%		O84638              	100.00%
Bootstrap support for K1QQ74 as seed ortholog is 100%.
Bootstrap support for O84638 as seed ortholog is 100%.

Group of orthologs #71. Best score 208 bits
Score difference with first non-orthologous sequence - C.gigas:208 C.trachomatis:208

K1QSZ8              	100.00%		O84316              	100.00%
K1QQG7              	10.82%		
Bootstrap support for K1QSZ8 as seed ortholog is 100%.
Bootstrap support for O84316 as seed ortholog is 100%.

Group of orthologs #72. Best score 201 bits
Score difference with first non-orthologous sequence - C.gigas:201 C.trachomatis:201

K1PXL6              	100.00%		O84360              	100.00%
Bootstrap support for K1PXL6 as seed ortholog is 100%.
Bootstrap support for O84360 as seed ortholog is 100%.

Group of orthologs #73. Best score 201 bits
Score difference with first non-orthologous sequence - C.gigas:201 C.trachomatis:201

K1R475              	100.00%		O84196              	100.00%
Bootstrap support for K1R475 as seed ortholog is 100%.
Bootstrap support for O84196 as seed ortholog is 100%.

Group of orthologs #74. Best score 195 bits
Score difference with first non-orthologous sequence - C.gigas:195 C.trachomatis:195

K1R2N1              	100.00%		O84561              	100.00%
K1PU86              	18.45%		
Bootstrap support for K1R2N1 as seed ortholog is 100%.
Bootstrap support for O84561 as seed ortholog is 100%.

Group of orthologs #75. Best score 193 bits
Score difference with first non-orthologous sequence - C.gigas:193 C.trachomatis:193

K1R5G5              	100.00%		O84812              	100.00%
K1Q9A5              	53.45%		
K1PF88              	10.30%		
Bootstrap support for K1R5G5 as seed ortholog is 100%.
Bootstrap support for O84812 as seed ortholog is 100%.

Group of orthologs #76. Best score 193 bits
Score difference with first non-orthologous sequence - C.gigas:193 C.trachomatis:193

K1QHH9              	100.00%		O84859              	100.00%
K1RFW3              	6.16%		
Bootstrap support for K1QHH9 as seed ortholog is 100%.
Bootstrap support for O84859 as seed ortholog is 100%.

Group of orthologs #77. Best score 193 bits
Score difference with first non-orthologous sequence - C.gigas:66 C.trachomatis:193

K1PBD7              	100.00%		O84548              	100.00%
Bootstrap support for K1PBD7 as seed ortholog is 92%.
Bootstrap support for O84548 as seed ortholog is 100%.

Group of orthologs #78. Best score 186 bits
Score difference with first non-orthologous sequence - C.gigas:35 C.trachomatis:186

K1QD63              	100.00%		O84423              	100.00%
Bootstrap support for K1QD63 as seed ortholog is 82%.
Bootstrap support for O84423 as seed ortholog is 100%.

Group of orthologs #79. Best score 182 bits
Score difference with first non-orthologous sequence - C.gigas:105 C.trachomatis:182

K1QLH0              	100.00%		O84608              	100.00%
K1Q615              	19.64%		
Bootstrap support for K1QLH0 as seed ortholog is 99%.
Bootstrap support for O84608 as seed ortholog is 100%.

Group of orthologs #80. Best score 182 bits
Score difference with first non-orthologous sequence - C.gigas:182 C.trachomatis:182

K1QYM7              	100.00%		O84874              	100.00%
Bootstrap support for K1QYM7 as seed ortholog is 100%.
Bootstrap support for O84874 as seed ortholog is 100%.

Group of orthologs #81. Best score 180 bits
Score difference with first non-orthologous sequence - C.gigas:180 C.trachomatis:180

K1QD02              	100.00%		O84704              	100.00%
Bootstrap support for K1QD02 as seed ortholog is 100%.
Bootstrap support for O84704 as seed ortholog is 100%.

Group of orthologs #82. Best score 176 bits
Score difference with first non-orthologous sequence - C.gigas:176 C.trachomatis:176

K1QKG4              	100.00%		O84200              	100.00%
K1P1Q4              	6.33%		
Bootstrap support for K1QKG4 as seed ortholog is 100%.
Bootstrap support for O84200 as seed ortholog is 100%.

Group of orthologs #83. Best score 171 bits
Score difference with first non-orthologous sequence - C.gigas:171 C.trachomatis:78

K1RBC9              	100.00%		O84755              	100.00%
Bootstrap support for K1RBC9 as seed ortholog is 100%.
Bootstrap support for O84755 as seed ortholog is 92%.

Group of orthologs #84. Best score 168 bits
Score difference with first non-orthologous sequence - C.gigas:168 C.trachomatis:168

K1QEF0              	100.00%		P18584              	100.00%
Bootstrap support for K1QEF0 as seed ortholog is 100%.
Bootstrap support for P18584 as seed ortholog is 100%.

Group of orthologs #85. Best score 167 bits
Score difference with first non-orthologous sequence - C.gigas:167 C.trachomatis:167

K1RRQ1              	100.00%		O84098              	100.00%
Bootstrap support for K1RRQ1 as seed ortholog is 100%.
Bootstrap support for O84098 as seed ortholog is 100%.

Group of orthologs #86. Best score 165 bits
Score difference with first non-orthologous sequence - C.gigas:35 C.trachomatis:165

K1RWW5              	100.00%		O84676              	100.00%
                    	       		O84722              	12.21%
Bootstrap support for K1RWW5 as seed ortholog is 83%.
Bootstrap support for O84676 as seed ortholog is 100%.

Group of orthologs #87. Best score 164 bits
Score difference with first non-orthologous sequence - C.gigas:5 C.trachomatis:164

K1Q1Z3              	100.00%		O84734              	100.00%
Bootstrap support for K1Q1Z3 as seed ortholog is 55%.
Alternative seed ortholog is K1R1U6 (5 bits away from this cluster)
Bootstrap support for O84734 as seed ortholog is 100%.

Group of orthologs #88. Best score 164 bits
Score difference with first non-orthologous sequence - C.gigas:164 C.trachomatis:164

K1QP14              	100.00%		O84109              	100.00%
Bootstrap support for K1QP14 as seed ortholog is 100%.
Bootstrap support for O84109 as seed ortholog is 100%.

Group of orthologs #89. Best score 161 bits
Score difference with first non-orthologous sequence - C.gigas:56 C.trachomatis:161

K1QI11              	100.00%		O84247              	100.00%
K1Q4Q8              	63.66%		
Bootstrap support for K1QI11 as seed ortholog is 95%.
Bootstrap support for O84247 as seed ortholog is 100%.

Group of orthologs #90. Best score 156 bits
Score difference with first non-orthologous sequence - C.gigas:156 C.trachomatis:156

K1P0G2              	100.00%		O84383              	100.00%
Bootstrap support for K1P0G2 as seed ortholog is 100%.
Bootstrap support for O84383 as seed ortholog is 100%.

Group of orthologs #91. Best score 156 bits
Score difference with first non-orthologous sequence - C.gigas:156 C.trachomatis:156

K1R4X9              	100.00%		O84720              	100.00%
Bootstrap support for K1R4X9 as seed ortholog is 100%.
Bootstrap support for O84720 as seed ortholog is 100%.

Group of orthologs #92. Best score 154 bits
Score difference with first non-orthologous sequence - C.gigas:154 C.trachomatis:154

K1RW99              	100.00%		O84456              	100.00%
Bootstrap support for K1RW99 as seed ortholog is 100%.
Bootstrap support for O84456 as seed ortholog is 100%.

Group of orthologs #93. Best score 153 bits
Score difference with first non-orthologous sequence - C.gigas:153 C.trachomatis:39

K1QKG9              	100.00%		O84260              	100.00%
Bootstrap support for K1QKG9 as seed ortholog is 100%.
Bootstrap support for O84260 as seed ortholog is 83%.

Group of orthologs #94. Best score 151 bits
Score difference with first non-orthologous sequence - C.gigas:151 C.trachomatis:151

K1RDX1              	100.00%		O84274              	100.00%
Bootstrap support for K1RDX1 as seed ortholog is 100%.
Bootstrap support for O84274 as seed ortholog is 100%.

Group of orthologs #95. Best score 149 bits
Score difference with first non-orthologous sequence - C.gigas:149 C.trachomatis:149

K1QBL3              	100.00%		O84727              	100.00%
K1R887              	41.73%		
Bootstrap support for K1QBL3 as seed ortholog is 100%.
Bootstrap support for O84727 as seed ortholog is 100%.

Group of orthologs #96. Best score 149 bits
Score difference with first non-orthologous sequence - C.gigas:149 C.trachomatis:149

K1Q5R6              	100.00%		O84630              	100.00%
Bootstrap support for K1Q5R6 as seed ortholog is 100%.
Bootstrap support for O84630 as seed ortholog is 100%.

Group of orthologs #97. Best score 148 bits
Score difference with first non-orthologous sequence - C.gigas:148 C.trachomatis:148

K1PJ59              	100.00%		O84332              	100.00%
Bootstrap support for K1PJ59 as seed ortholog is 100%.
Bootstrap support for O84332 as seed ortholog is 100%.

Group of orthologs #98. Best score 139 bits
Score difference with first non-orthologous sequence - C.gigas:139 C.trachomatis:139

K1Q105              	100.00%		O84492              	100.00%
Bootstrap support for K1Q105 as seed ortholog is 100%.
Bootstrap support for O84492 as seed ortholog is 100%.

Group of orthologs #99. Best score 134 bits
Score difference with first non-orthologous sequence - C.gigas:134 C.trachomatis:134

K1QK26              	100.00%		O84402              	100.00%
K1PQA0              	14.66%		
K1R9G7              	8.59%		
Bootstrap support for K1QK26 as seed ortholog is 100%.
Bootstrap support for O84402 as seed ortholog is 100%.

Group of orthologs #100. Best score 129 bits
Score difference with first non-orthologous sequence - C.gigas:3 C.trachomatis:86

K1Q460              	100.00%		P38004              	100.00%
K1QNK4              	100.00%		
K1QQH7              	58.45%		
K1RIS2              	28.42%		
Bootstrap support for K1Q460 as seed ortholog is 52%.
Alternative seed ortholog is K1PEV9 (3 bits away from this cluster)
Bootstrap support for K1QNK4 as seed ortholog is 51%.
Alternative seed ortholog is K1PEV9 (3 bits away from this cluster)
Bootstrap support for P38004 as seed ortholog is 99%.

Group of orthologs #101. Best score 128 bits
Score difference with first non-orthologous sequence - C.gigas:128 C.trachomatis:128

K1PFB1              	100.00%		O84864              	100.00%
K1PT20              	30.88%		
K1QK91              	17.25%		
K1P2Z7              	16.71%		
K1PIT4              	14.64%		
K1RU09              	13.97%		
K1QDW9              	11.50%		
Bootstrap support for K1PFB1 as seed ortholog is 100%.
Bootstrap support for O84864 as seed ortholog is 100%.

Group of orthologs #102. Best score 126 bits
Score difference with first non-orthologous sequence - C.gigas:126 C.trachomatis:126

K1R811              	100.00%		O84835              	100.00%
Bootstrap support for K1R811 as seed ortholog is 100%.
Bootstrap support for O84835 as seed ortholog is 100%.

Group of orthologs #103. Best score 125 bits
Score difference with first non-orthologous sequence - C.gigas:13 C.trachomatis:125

K1PEF6              	100.00%		O84241              	100.00%
Bootstrap support for K1PEF6 as seed ortholog is 63%.
Alternative seed ortholog is K1QMS7 (13 bits away from this cluster)
Bootstrap support for O84241 as seed ortholog is 100%.

Group of orthologs #104. Best score 124 bits
Score difference with first non-orthologous sequence - C.gigas:56 C.trachomatis:124

K1PEF9              	100.00%		O84703              	100.00%
Bootstrap support for K1PEF9 as seed ortholog is 98%.
Bootstrap support for O84703 as seed ortholog is 100%.

Group of orthologs #105. Best score 122 bits
Score difference with first non-orthologous sequence - C.gigas:11 C.trachomatis:122

K1RFD2              	100.00%		O84130              	100.00%
Bootstrap support for K1RFD2 as seed ortholog is 63%.
Alternative seed ortholog is K1QDN9 (11 bits away from this cluster)
Bootstrap support for O84130 as seed ortholog is 100%.

Group of orthologs #106. Best score 117 bits
Score difference with first non-orthologous sequence - C.gigas:117 C.trachomatis:117

K1QUQ4              	100.00%		P55137              	100.00%
Bootstrap support for K1QUQ4 as seed ortholog is 100%.
Bootstrap support for P55137 as seed ortholog is 100%.

Group of orthologs #107. Best score 114 bits
Score difference with first non-orthologous sequence - C.gigas:55 C.trachomatis:114

K1PY66              	100.00%		O84589              	100.00%
K1PF69              	97.18%		
Bootstrap support for K1PY66 as seed ortholog is 90%.
Bootstrap support for O84589 as seed ortholog is 100%.

Group of orthologs #108. Best score 112 bits
Score difference with first non-orthologous sequence - C.gigas:112 C.trachomatis:112

K1Q8L1              	100.00%		O84123              	100.00%
Bootstrap support for K1Q8L1 as seed ortholog is 100%.
Bootstrap support for O84123 as seed ortholog is 100%.

Group of orthologs #109. Best score 108 bits
Score difference with first non-orthologous sequence - C.gigas:108 C.trachomatis:108

K1QMY0              	100.00%		O84442              	100.00%
K1QHU4              	17.82%		
K1PY38              	10.82%		
K1RDM1              	5.82%		
Bootstrap support for K1QMY0 as seed ortholog is 100%.
Bootstrap support for O84442 as seed ortholog is 100%.

Group of orthologs #110. Best score 107 bits
Score difference with first non-orthologous sequence - C.gigas:33 C.trachomatis:107

K1Q1F7              	100.00%		O84781              	100.00%
K1RFD4              	29.93%		
Bootstrap support for K1Q1F7 as seed ortholog is 85%.
Bootstrap support for O84781 as seed ortholog is 100%.

Group of orthologs #111. Best score 107 bits
Score difference with first non-orthologous sequence - C.gigas:107 C.trachomatis:107

K1RAY2              	100.00%		O84771              	100.00%
Bootstrap support for K1RAY2 as seed ortholog is 100%.
Bootstrap support for O84771 as seed ortholog is 100%.

Group of orthologs #112. Best score 106 bits
Score difference with first non-orthologous sequence - C.gigas:106 C.trachomatis:106

K1PA81              	100.00%		O84463              	100.00%
K1QTW4              	61.79%		
Bootstrap support for K1PA81 as seed ortholog is 100%.
Bootstrap support for O84463 as seed ortholog is 100%.

Group of orthologs #113. Best score 105 bits
Score difference with first non-orthologous sequence - C.gigas:105 C.trachomatis:105

K1PSH2              	100.00%		P66370              	100.00%
Bootstrap support for K1PSH2 as seed ortholog is 100%.
Bootstrap support for P66370 as seed ortholog is 100%.

Group of orthologs #114. Best score 104 bits
Score difference with first non-orthologous sequence - C.gigas:104 C.trachomatis:104

K1QHV1              	100.00%		P0CE01              	100.00%
Bootstrap support for K1QHV1 as seed ortholog is 100%.
Bootstrap support for P0CE01 as seed ortholog is 100%.

Group of orthologs #115. Best score 102 bits
Score difference with first non-orthologous sequence - C.gigas:8 C.trachomatis:102

K1RHA5              	100.00%		O84508              	100.00%
Bootstrap support for K1RHA5 as seed ortholog is 61%.
Alternative seed ortholog is K1R1K7 (8 bits away from this cluster)
Bootstrap support for O84508 as seed ortholog is 100%.

Group of orthologs #116. Best score 101 bits
Score difference with first non-orthologous sequence - C.gigas:26 C.trachomatis:101

K1QC38              	100.00%		O84599              	100.00%
K1QKS6              	61.47%		
Bootstrap support for K1QC38 as seed ortholog is 78%.
Bootstrap support for O84599 as seed ortholog is 100%.

Group of orthologs #117. Best score 101 bits
Score difference with first non-orthologous sequence - C.gigas:14 C.trachomatis:101

K1P9D1              	100.00%		O84843              	100.00%
Bootstrap support for K1P9D1 as seed ortholog is 65%.
Alternative seed ortholog is K1PWP4 (14 bits away from this cluster)
Bootstrap support for O84843 as seed ortholog is 100%.

Group of orthologs #118. Best score 100 bits
Score difference with first non-orthologous sequence - C.gigas:11 C.trachomatis:11

K1PL68              	100.00%		O84132              	100.00%
Bootstrap support for K1PL68 as seed ortholog is 61%.
Alternative seed ortholog is K1P8G5 (11 bits away from this cluster)
Bootstrap support for O84132 as seed ortholog is 62%.
Alternative seed ortholog is O84205 (11 bits away from this cluster)

Group of orthologs #119. Best score 99 bits
Score difference with first non-orthologous sequence - C.gigas:99 C.trachomatis:99

K1QS22              	100.00%		O84391              	100.00%
Bootstrap support for K1QS22 as seed ortholog is 100%.
Bootstrap support for O84391 as seed ortholog is 100%.

Group of orthologs #120. Best score 97 bits
Score difference with first non-orthologous sequence - C.gigas:97 C.trachomatis:97

K1PZ81              	100.00%		O84358              	100.00%
Bootstrap support for K1PZ81 as seed ortholog is 100%.
Bootstrap support for O84358 as seed ortholog is 100%.

Group of orthologs #121. Best score 96 bits
Score difference with first non-orthologous sequence - C.gigas:96 C.trachomatis:96

K1Q107              	100.00%		O84390              	100.00%
Bootstrap support for K1Q107 as seed ortholog is 100%.
Bootstrap support for O84390 as seed ortholog is 100%.

Group of orthologs #122. Best score 96 bits
Score difference with first non-orthologous sequence - C.gigas:96 C.trachomatis:96

K1QJ95              	100.00%		O84851              	100.00%
Bootstrap support for K1QJ95 as seed ortholog is 100%.
Bootstrap support for O84851 as seed ortholog is 100%.

Group of orthologs #123. Best score 94 bits
Score difference with first non-orthologous sequence - C.gigas:94 C.trachomatis:94

K1Q3B4              	100.00%		O84649              	100.00%
Bootstrap support for K1Q3B4 as seed ortholog is 100%.
Bootstrap support for O84649 as seed ortholog is 100%.

Group of orthologs #124. Best score 94 bits
Score difference with first non-orthologous sequence - C.gigas:94 C.trachomatis:94

K1QVV1              	100.00%		O84215              	100.00%
Bootstrap support for K1QVV1 as seed ortholog is 100%.
Bootstrap support for O84215 as seed ortholog is 100%.

Group of orthologs #125. Best score 92 bits
Score difference with first non-orthologous sequence - C.gigas:92 C.trachomatis:92

K1QMD3              	100.00%		O84719              	100.00%
K1P8T5              	55.92%		
Bootstrap support for K1QMD3 as seed ortholog is 100%.
Bootstrap support for O84719 as seed ortholog is 100%.

Group of orthologs #126. Best score 91 bits
Score difference with first non-orthologous sequence - C.gigas:91 C.trachomatis:91

K1Q0P3              	100.00%		O84350              	100.00%
Bootstrap support for K1Q0P3 as seed ortholog is 100%.
Bootstrap support for O84350 as seed ortholog is 100%.

Group of orthologs #127. Best score 89 bits
Score difference with first non-orthologous sequence - C.gigas:89 C.trachomatis:89

K1S3Y1              	100.00%		O84782              	100.00%
K1PXC6              	18.68%		
K1PZ49              	16.99%		
K1Q8S1              	16.01%		
K1Q6D6              	7.16%		
Bootstrap support for K1S3Y1 as seed ortholog is 100%.
Bootstrap support for O84782 as seed ortholog is 100%.

Group of orthologs #128. Best score 87 bits
Score difference with first non-orthologous sequence - C.gigas:87 C.trachomatis:87

K1PMF4              	100.00%		O84865              	100.00%
Bootstrap support for K1PMF4 as seed ortholog is 100%.
Bootstrap support for O84865 as seed ortholog is 100%.

Group of orthologs #129. Best score 86 bits
Score difference with first non-orthologous sequence - C.gigas:86 C.trachomatis:86

K1QWE2              	100.00%		P0CE06              	100.00%
Bootstrap support for K1QWE2 as seed ortholog is 100%.
Bootstrap support for P0CE06 as seed ortholog is 100%.

Group of orthologs #130. Best score 82 bits
Score difference with first non-orthologous sequence - C.gigas:82 C.trachomatis:82

K1PAS9              	100.00%		O84301              	100.00%
K1QN67              	37.67%		
K1QBP9              	7.66%		
Bootstrap support for K1PAS9 as seed ortholog is 100%.
Bootstrap support for O84301 as seed ortholog is 100%.

Group of orthologs #131. Best score 82 bits
Score difference with first non-orthologous sequence - C.gigas:82 C.trachomatis:82

K1PBL0              	100.00%		P0CD79              	100.00%
Bootstrap support for K1PBL0 as seed ortholog is 100%.
Bootstrap support for P0CD79 as seed ortholog is 100%.

Group of orthologs #132. Best score 82 bits
Score difference with first non-orthologous sequence - C.gigas:17 C.trachomatis:82

K1QK24              	100.00%		O84578              	100.00%
Bootstrap support for K1QK24 as seed ortholog is 66%.
Alternative seed ortholog is K1QZX2 (17 bits away from this cluster)
Bootstrap support for O84578 as seed ortholog is 100%.

Group of orthologs #133. Best score 81 bits
Score difference with first non-orthologous sequence - C.gigas:81 C.trachomatis:81

K1R069              	100.00%		O84650              	100.00%
K1QUG2              	15.33%		
K1QK42              	7.31%		
Bootstrap support for K1R069 as seed ortholog is 100%.
Bootstrap support for O84650 as seed ortholog is 100%.

Group of orthologs #134. Best score 81 bits
Score difference with first non-orthologous sequence - C.gigas:81 C.trachomatis:81

K1PBU9              	100.00%		O84665              	100.00%
                    	       		O84108              	5.59%
Bootstrap support for K1PBU9 as seed ortholog is 100%.
Bootstrap support for O84665 as seed ortholog is 100%.

Group of orthologs #135. Best score 81 bits
Score difference with first non-orthologous sequence - C.gigas:81 C.trachomatis:81

K1RMK9              	100.00%		O84435              	100.00%
Bootstrap support for K1RMK9 as seed ortholog is 100%.
Bootstrap support for O84435 as seed ortholog is 100%.

Group of orthologs #136. Best score 78 bits
Score difference with first non-orthologous sequence - C.gigas:78 C.trachomatis:78

K1PMP3              	100.00%		O84750              	100.00%
Bootstrap support for K1PMP3 as seed ortholog is 100%.
Bootstrap support for O84750 as seed ortholog is 100%.

Group of orthologs #137. Best score 78 bits
Score difference with first non-orthologous sequence - C.gigas:78 C.trachomatis:78

K1PV98              	100.00%		O84658              	100.00%
Bootstrap support for K1PV98 as seed ortholog is 100%.
Bootstrap support for O84658 as seed ortholog is 100%.

Group of orthologs #138. Best score 77 bits
Score difference with first non-orthologous sequence - C.gigas:77 C.trachomatis:77

K1PKD7              	100.00%		O84189              	100.00%
Bootstrap support for K1PKD7 as seed ortholog is 100%.
Bootstrap support for O84189 as seed ortholog is 100%.

Group of orthologs #139. Best score 76 bits
Score difference with first non-orthologous sequence - C.gigas:76 C.trachomatis:76

K1Q1I3              	100.00%		O84212              	100.00%
K1Q3Y7              	65.79%		
K1RB89              	8.81%		
Bootstrap support for K1Q1I3 as seed ortholog is 100%.
Bootstrap support for O84212 as seed ortholog is 100%.

Group of orthologs #140. Best score 75 bits
Score difference with first non-orthologous sequence - C.gigas:29 C.trachomatis:75

K1PYI6              	100.00%		O84544              	100.00%
Bootstrap support for K1PYI6 as seed ortholog is 95%.
Bootstrap support for O84544 as seed ortholog is 100%.

Group of orthologs #141. Best score 75 bits
Score difference with first non-orthologous sequence - C.gigas:75 C.trachomatis:75

K1QGS3              	100.00%		O84792              	100.00%
Bootstrap support for K1QGS3 as seed ortholog is 100%.
Bootstrap support for O84792 as seed ortholog is 100%.

Group of orthologs #142. Best score 74 bits
Score difference with first non-orthologous sequence - C.gigas:74 C.trachomatis:74

K1RAR4              	100.00%		O84611              	100.00%
Bootstrap support for K1RAR4 as seed ortholog is 100%.
Bootstrap support for O84611 as seed ortholog is 100%.

Group of orthologs #143. Best score 73 bits
Score difference with first non-orthologous sequence - C.gigas:73 C.trachomatis:73

K1PEH5              	100.00%		O84369              	100.00%
Bootstrap support for K1PEH5 as seed ortholog is 100%.
Bootstrap support for O84369 as seed ortholog is 100%.

Group of orthologs #144. Best score 72 bits
Score difference with first non-orthologous sequence - C.gigas:30 C.trachomatis:72

K1R1I0              	100.00%		P26623              	100.00%
K1PUI4              	38.74%		
Bootstrap support for K1R1I0 as seed ortholog is 91%.
Bootstrap support for P26623 as seed ortholog is 100%.

Group of orthologs #145. Best score 72 bits
Score difference with first non-orthologous sequence - C.gigas:72 C.trachomatis:72

K1PWE8              	100.00%		O84321              	100.00%
Bootstrap support for K1PWE8 as seed ortholog is 100%.
Bootstrap support for O84321 as seed ortholog is 100%.

Group of orthologs #146. Best score 70 bits
Score difference with first non-orthologous sequence - C.gigas:70 C.trachomatis:70

K1QQB6              	100.00%		P0CE03              	100.00%
K1P7X2              	82.61%		
Bootstrap support for K1QQB6 as seed ortholog is 100%.
Bootstrap support for P0CE03 as seed ortholog is 100%.

Group of orthologs #147. Best score 69 bits
Score difference with first non-orthologous sequence - C.gigas:69 C.trachomatis:69

K1Q3X1              	100.00%		O84379              	100.00%
K1RCM5              	55.52%		
K1QBL8              	52.90%		
K1QW45              	40.27%		
K1PK48              	22.53%		
Bootstrap support for K1Q3X1 as seed ortholog is 100%.
Bootstrap support for O84379 as seed ortholog is 100%.

Group of orthologs #148. Best score 67 bits
Score difference with first non-orthologous sequence - C.gigas:67 C.trachomatis:67

K1P8Z2              	100.00%		O84547              	100.00%
Bootstrap support for K1P8Z2 as seed ortholog is 100%.
Bootstrap support for O84547 as seed ortholog is 100%.

Group of orthologs #149. Best score 67 bits
Score difference with first non-orthologous sequence - C.gigas:67 C.trachomatis:67

K1PW65              	100.00%		O84806              	100.00%
Bootstrap support for K1PW65 as seed ortholog is 100%.
Bootstrap support for O84806 as seed ortholog is 100%.

Group of orthologs #150. Best score 66 bits
Score difference with first non-orthologous sequence - C.gigas:66 C.trachomatis:66

K1PQJ5              	100.00%		O84294              	100.00%
K1QHS7              	18.69%		
Bootstrap support for K1PQJ5 as seed ortholog is 100%.
Bootstrap support for O84294 as seed ortholog is 100%.

Group of orthologs #151. Best score 66 bits
Score difference with first non-orthologous sequence - C.gigas:66 C.trachomatis:66

K1QFN1              	100.00%		P0CD81              	100.00%
Bootstrap support for K1QFN1 as seed ortholog is 100%.
Bootstrap support for P0CD81 as seed ortholog is 100%.

Group of orthologs #152. Best score 65 bits
Score difference with first non-orthologous sequence - C.gigas:65 C.trachomatis:65

K1PM50              	100.00%		O84128              	100.00%
Bootstrap support for K1PM50 as seed ortholog is 100%.
Bootstrap support for O84128 as seed ortholog is 100%.

Group of orthologs #153. Best score 64 bits
Score difference with first non-orthologous sequence - C.gigas:64 C.trachomatis:64

K1R5I2              	100.00%		O84284              	100.00%
K1QHK3              	8.47%		
Bootstrap support for K1R5I2 as seed ortholog is 100%.
Bootstrap support for O84284 as seed ortholog is 100%.

Group of orthologs #154. Best score 64 bits
Score difference with first non-orthologous sequence - C.gigas:64 C.trachomatis:64

K1PVM4              	100.00%		O84131              	100.00%
Bootstrap support for K1PVM4 as seed ortholog is 100%.
Bootstrap support for O84131 as seed ortholog is 100%.

Group of orthologs #155. Best score 62 bits
Score difference with first non-orthologous sequence - C.gigas:62 C.trachomatis:62

K1RPE5              	100.00%		O84263              	100.00%
K1QS63              	23.02%		O84541              	10.14%
K1QH20              	17.01%		
K1QP39              	13.57%		
K1Q752              	13.23%		
K1S6X0              	13.23%		
K1QXP9              	13.06%		
K1RVB6              	11.51%		
K1REL4              	11.34%		
K1PJH7              	9.79%		
K1QSU6              	9.79%		
K1Q962              	7.56%		
K1RXV4              	7.22%		
K1Q0W0              	6.36%		
K1P6Y7              	5.15%		
K1PWM1              	5.15%		
Bootstrap support for K1RPE5 as seed ortholog is 100%.
Bootstrap support for O84263 as seed ortholog is 100%.

Group of orthologs #156. Best score 62 bits
Score difference with first non-orthologous sequence - C.gigas:62 C.trachomatis:62

K1Q6T1              	100.00%		O84633              	100.00%
K1QA85              	5.84%		
Bootstrap support for K1Q6T1 as seed ortholog is 100%.
Bootstrap support for O84633 as seed ortholog is 100%.

Group of orthologs #157. Best score 61 bits
Score difference with first non-orthologous sequence - C.gigas:61 C.trachomatis:61

K1RDF3              	100.00%		O84684              	100.00%
Bootstrap support for K1RDF3 as seed ortholog is 100%.
Bootstrap support for O84684 as seed ortholog is 100%.

Group of orthologs #158. Best score 60 bits
Score difference with first non-orthologous sequence - C.gigas:60 C.trachomatis:60

K1PLF9              	100.00%		O84682              	100.00%
K1QTF2              	65.16%		
K1PTK3              	50.08%		
Bootstrap support for K1PLF9 as seed ortholog is 100%.
Bootstrap support for O84682 as seed ortholog is 100%.

Group of orthologs #159. Best score 59 bits
Score difference with first non-orthologous sequence - C.gigas:59 C.trachomatis:59

K1QAY2              	100.00%		P0CD85              	100.00%
Bootstrap support for K1QAY2 as seed ortholog is 100%.
Bootstrap support for P0CD85 as seed ortholog is 100%.

Group of orthologs #160. Best score 57 bits
Score difference with first non-orthologous sequence - C.gigas:57 C.trachomatis:57

K1QZV7              	100.00%		O84218              	100.00%
K1RHS6              	53.28%		
K1REG2              	45.81%		
K1QDY0              	31.22%		
K1R1Y6              	6.67%		
Bootstrap support for K1QZV7 as seed ortholog is 100%.
Bootstrap support for O84218 as seed ortholog is 100%.

Group of orthologs #161. Best score 57 bits
Score difference with first non-orthologous sequence - C.gigas:57 C.trachomatis:57

K1P6J1              	100.00%		O84778              	100.00%
K1QRQ2              	26.11%		
Bootstrap support for K1P6J1 as seed ortholog is 100%.
Bootstrap support for O84778 as seed ortholog is 100%.

Group of orthologs #162. Best score 57 bits
Score difference with first non-orthologous sequence - C.gigas:57 C.trachomatis:57

K1QFV6              	100.00%		P36424              	100.00%
Bootstrap support for K1QFV6 as seed ortholog is 100%.
Bootstrap support for P36424 as seed ortholog is 100%.

Group of orthologs #163. Best score 56 bits
Score difference with first non-orthologous sequence - C.gigas:56 C.trachomatis:56

K1R8W4              	100.00%		O84261              	100.00%
K1RD72              	10.17%		
K1QR40              	8.13%		
K1Q4Q4              	5.91%		
Bootstrap support for K1R8W4 as seed ortholog is 100%.
Bootstrap support for O84261 as seed ortholog is 100%.

Group of orthologs #164. Best score 56 bits
Score difference with first non-orthologous sequence - C.gigas:56 C.trachomatis:56

K1PN47              	100.00%		O84595              	100.00%
Bootstrap support for K1PN47 as seed ortholog is 100%.
Bootstrap support for O84595 as seed ortholog is 100%.

Group of orthologs #165. Best score 56 bits
Score difference with first non-orthologous sequence - C.gigas:56 C.trachomatis:56

K1Q2Y1              	100.00%		P66480              	100.00%
Bootstrap support for K1Q2Y1 as seed ortholog is 100%.
Bootstrap support for P66480 as seed ortholog is 100%.

Group of orthologs #166. Best score 56 bits
Score difference with first non-orthologous sequence - C.gigas:56 C.trachomatis:56

K1QWS8              	100.00%		O84259              	100.00%
Bootstrap support for K1QWS8 as seed ortholog is 100%.
Bootstrap support for O84259 as seed ortholog is 100%.

Group of orthologs #167. Best score 56 bits
Score difference with first non-orthologous sequence - C.gigas:56 C.trachomatis:56

K1RUC6              	100.00%		O84499              	100.00%
Bootstrap support for K1RUC6 as seed ortholog is 100%.
Bootstrap support for O84499 as seed ortholog is 100%.

Group of orthologs #168. Best score 55 bits
Score difference with first non-orthologous sequence - C.gigas:55 C.trachomatis:55

K1Q8Y8              	100.00%		O84503              	100.00%
Bootstrap support for K1Q8Y8 as seed ortholog is 100%.
Bootstrap support for O84503 as seed ortholog is 100%.

Group of orthologs #169. Best score 54 bits
Score difference with first non-orthologous sequence - C.gigas:54 C.trachomatis:54

K1RWD8              	100.00%		O84127              	100.00%
Bootstrap support for K1RWD8 as seed ortholog is 100%.
Bootstrap support for O84127 as seed ortholog is 100%.

Group of orthologs #170. Best score 53 bits
Score difference with first non-orthologous sequence - C.gigas:53 C.trachomatis:53

K1Q5B2              	100.00%		O84395              	100.00%
K1PWD7              	5.60%		
Bootstrap support for K1Q5B2 as seed ortholog is 100%.
Bootstrap support for O84395 as seed ortholog is 100%.

Group of orthologs #171. Best score 52 bits
Score difference with first non-orthologous sequence - C.gigas:10 C.trachomatis:52

K1P4M1              	100.00%		O84689              	100.00%
Bootstrap support for K1P4M1 as seed ortholog is 62%.
Alternative seed ortholog is K1R3Z1 (10 bits away from this cluster)
Bootstrap support for O84689 as seed ortholog is 100%.

Group of orthologs #172. Best score 51 bits
Score difference with first non-orthologous sequence - C.gigas:51 C.trachomatis:51

K1P8X7              	100.00%		O84618              	100.00%
Bootstrap support for K1P8X7 as seed ortholog is 100%.
Bootstrap support for O84618 as seed ortholog is 100%.

Group of orthologs #173. Best score 51 bits
Score difference with first non-orthologous sequence - C.gigas:51 C.trachomatis:51

K1P942              	100.00%		O84680              	100.00%
Bootstrap support for K1P942 as seed ortholog is 100%.
Bootstrap support for O84680 as seed ortholog is 100%.

Group of orthologs #174. Best score 50 bits
Score difference with first non-orthologous sequence - C.gigas:50 C.trachomatis:50

K1QFM0              	100.00%		O84032              	100.00%
Bootstrap support for K1QFM0 as seed ortholog is 100%.
Bootstrap support for O84032 as seed ortholog is 100%.

Group of orthologs #175. Best score 49 bits
Score difference with first non-orthologous sequence - C.gigas:49 C.trachomatis:49

K1P3P5              	100.00%		O84366              	100.00%
K1S4G1              	12.82%		
Bootstrap support for K1P3P5 as seed ortholog is 100%.
Bootstrap support for O84366 as seed ortholog is 100%.

Group of orthologs #176. Best score 49 bits
Score difference with first non-orthologous sequence - C.gigas:49 C.trachomatis:49

K1QKT4              	100.00%		O84776              	100.00%
Bootstrap support for K1QKT4 as seed ortholog is 100%.
Bootstrap support for O84776 as seed ortholog is 100%.

Group of orthologs #177. Best score 47 bits
Score difference with first non-orthologous sequence - C.gigas:47 C.trachomatis:47

K1R809              	100.00%		O84139              	100.00%
K1QY57              	28.24%		
Bootstrap support for K1R809 as seed ortholog is 100%.
Bootstrap support for O84139 as seed ortholog is 100%.

Group of orthologs #178. Best score 47 bits
Score difference with first non-orthologous sequence - C.gigas:47 C.trachomatis:47

K1QWC3              	100.00%		O84527              	100.00%
Bootstrap support for K1QWC3 as seed ortholog is 100%.
Bootstrap support for O84527 as seed ortholog is 100%.

Group of orthologs #179. Best score 47 bits
Score difference with first non-orthologous sequence - C.gigas:47 C.trachomatis:47

K1R500              	100.00%		O84221              	100.00%
Bootstrap support for K1R500 as seed ortholog is 100%.
Bootstrap support for O84221 as seed ortholog is 100%.

Group of orthologs #180. Best score 45 bits
Score difference with first non-orthologous sequence - C.gigas:45 C.trachomatis:45

K1PF24              	100.00%		O84048              	100.00%
Bootstrap support for K1PF24 as seed ortholog is 100%.
Bootstrap support for O84048 as seed ortholog is 100%.

Group of orthologs #181. Best score 42 bits
Score difference with first non-orthologous sequence - C.gigas:42 C.trachomatis:42

K1PVJ6              	100.00%		O84742              	100.00%
K1Q9D9              	11.57%		
Bootstrap support for K1PVJ6 as seed ortholog is 100%.
Bootstrap support for O84742 as seed ortholog is 100%.

Group of orthologs #182. Best score 40 bits
Score difference with first non-orthologous sequence - C.gigas:40 C.trachomatis:40

K1RE08              	100.00%		O84470              	100.00%
K1Q953              	77.86%		
Bootstrap support for K1RE08 as seed ortholog is 100%.
Bootstrap support for O84470 as seed ortholog is 100%.

Group of orthologs #183. Best score 40 bits
Score difference with first non-orthologous sequence - C.gigas:40 C.trachomatis:40

K1P4C3              	100.00%		O84467              	100.00%
Bootstrap support for K1P4C3 as seed ortholog is 100%.
Bootstrap support for O84467 as seed ortholog is 100%.