###################################
205 groups of orthologs
430 in-paralogs from C.familiaris
219 in-paralogs from C.trachomatis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 930 bits
Score difference with first non-orthologous sequence - C.familiaris:641 C.trachomatis:930

F1PLJ9              	100.00%		O84022              	100.00%
Bootstrap support for F1PLJ9 as seed ortholog is 100%.
Bootstrap support for O84022 as seed ortholog is 100%.

Group of orthologs #2. Best score 862 bits
Score difference with first non-orthologous sequence - C.familiaris:862 C.trachomatis:862

F1PSM2              	100.00%		O84250              	100.00%
F1P832              	46.12%		
F1PB77              	42.66%		
Bootstrap support for F1PSM2 as seed ortholog is 100%.
Bootstrap support for O84250 as seed ortholog is 100%.

Group of orthologs #3. Best score 706 bits
Score difference with first non-orthologous sequence - C.familiaris:243 C.trachomatis:706

E2QZD9              	100.00%		O84348              	100.00%
Bootstrap support for E2QZD9 as seed ortholog is 100%.
Bootstrap support for O84348 as seed ortholog is 100%.

Group of orthologs #4. Best score 626 bits
Score difference with first non-orthologous sequence - C.familiaris:626 C.trachomatis:626

F6V2H2              	100.00%		O84716              	100.00%
F1PAM0              	36.02%		
Bootstrap support for F6V2H2 as seed ortholog is 100%.
Bootstrap support for O84716 as seed ortholog is 100%.

Group of orthologs #5. Best score 591 bits
Score difference with first non-orthologous sequence - C.familiaris:455 C.trachomatis:591

F1PF69              	100.00%		O84067              	100.00%
Bootstrap support for F1PF69 as seed ortholog is 100%.
Bootstrap support for O84067 as seed ortholog is 100%.

Group of orthologs #6. Best score 560 bits
Score difference with first non-orthologous sequence - C.familiaris:318 C.trachomatis:507

F1PIC7              	100.00%		P17821              	100.00%
E2R0T6              	33.75%		
L7N050              	31.12%		
G1K268              	30.98%		
Q7YQC6              	30.98%		
E2QX84              	30.84%		
G1K267              	28.63%		
Bootstrap support for F1PIC7 as seed ortholog is 100%.
Bootstrap support for P17821 as seed ortholog is 100%.

Group of orthologs #7. Best score 521 bits
Score difference with first non-orthologous sequence - C.familiaris:521 C.trachomatis:521

F1PK40              	100.00%		O84057              	100.00%
H9GW68              	52.72%		
Bootstrap support for F1PK40 as seed ortholog is 100%.
Bootstrap support for O84057 as seed ortholog is 100%.

Group of orthologs #8. Best score 515 bits
Score difference with first non-orthologous sequence - C.familiaris:319 C.trachomatis:515

E2RTJ7              	100.00%		O84304              	100.00%
F6USV0              	22.98%		
Bootstrap support for E2RTJ7 as seed ortholog is 99%.
Bootstrap support for O84304 as seed ortholog is 100%.

Group of orthologs #9. Best score 515 bits
Score difference with first non-orthologous sequence - C.familiaris:39 C.trachomatis:515

F1PQD0              	100.00%		O84444              	100.00%
Bootstrap support for F1PQD0 as seed ortholog is 77%.
Bootstrap support for O84444 as seed ortholog is 100%.

Group of orthologs #10. Best score 504 bits
Score difference with first non-orthologous sequence - C.familiaris:504 C.trachomatis:504

E2R8P1              	100.00%		O84834              	100.00%
Bootstrap support for E2R8P1 as seed ortholog is 100%.
Bootstrap support for O84834 as seed ortholog is 100%.

Group of orthologs #11. Best score 498 bits
Score difference with first non-orthologous sequence - C.familiaris:498 C.trachomatis:498

F1PJ48              	100.00%		O84585              	100.00%
E2RHW7              	50.57%		
E2QSS4              	25.11%		
Bootstrap support for F1PJ48 as seed ortholog is 100%.
Bootstrap support for O84585 as seed ortholog is 100%.

Group of orthologs #12. Best score 491 bits
Score difference with first non-orthologous sequence - C.familiaris:491 C.trachomatis:491

F1PE09              	100.00%		O84066              	100.00%
Bootstrap support for F1PE09 as seed ortholog is 100%.
Bootstrap support for O84066 as seed ortholog is 100%.

Group of orthologs #13. Best score 475 bits
Score difference with first non-orthologous sequence - C.familiaris:475 C.trachomatis:475

E2RGR9              	100.00%		O84863              	100.00%
Bootstrap support for E2RGR9 as seed ortholog is 100%.
Bootstrap support for O84863 as seed ortholog is 100%.

Group of orthologs #14. Best score 462 bits
Score difference with first non-orthologous sequence - C.familiaris:462 C.trachomatis:462

E2R8R6              	100.00%		P0CD73              	100.00%
Bootstrap support for E2R8R6 as seed ortholog is 100%.
Bootstrap support for P0CD73 as seed ortholog is 100%.

Group of orthologs #15. Best score 461 bits
Score difference with first non-orthologous sequence - C.familiaris:358 C.trachomatis:300

J9PB46              	100.00%		P0C0Z7              	100.00%
J9NYE6              	14.89%		
J9PAK1              	13.11%		
Bootstrap support for J9PB46 as seed ortholog is 100%.
Bootstrap support for P0C0Z7 as seed ortholog is 100%.

Group of orthologs #16. Best score 453 bits
Score difference with first non-orthologous sequence - C.familiaris:453 C.trachomatis:453

E2QYF3              	100.00%		O84848              	100.00%
E2R4F3              	5.72%		
Bootstrap support for E2QYF3 as seed ortholog is 100%.
Bootstrap support for O84848 as seed ortholog is 100%.

Group of orthologs #17. Best score 450 bits
Score difference with first non-orthologous sequence - C.familiaris:346 C.trachomatis:450

E2RQR3              	100.00%		O84211              	100.00%
Bootstrap support for E2RQR3 as seed ortholog is 100%.
Bootstrap support for O84211 as seed ortholog is 100%.

Group of orthologs #18. Best score 444 bits
Score difference with first non-orthologous sequence - C.familiaris:394 C.trachomatis:444

F1P7C2              	100.00%		O84754              	100.00%
F1PA93              	23.23%		
Bootstrap support for F1P7C2 as seed ortholog is 100%.
Bootstrap support for O84754 as seed ortholog is 100%.

Group of orthologs #19. Best score 437 bits
Score difference with first non-orthologous sequence - C.familiaris:235 C.trachomatis:437

E2QRR5              	100.00%		O84460              	100.00%
Bootstrap support for E2QRR5 as seed ortholog is 100%.
Bootstrap support for O84460 as seed ortholog is 100%.

Group of orthologs #20. Best score 422 bits
Score difference with first non-orthologous sequence - C.familiaris:422 C.trachomatis:422

E2QUQ3              	100.00%		Q59321              	100.00%
E2RD29              	64.88%		
Bootstrap support for E2QUQ3 as seed ortholog is 100%.
Bootstrap support for Q59321 as seed ortholog is 100%.

Group of orthologs #21. Best score 417 bits
Score difference with first non-orthologous sequence - C.familiaris:417 C.trachomatis:417

E2R518              	100.00%		O84126              	100.00%
Bootstrap support for E2R518 as seed ortholog is 100%.
Bootstrap support for O84126 as seed ortholog is 100%.

Group of orthologs #22. Best score 411 bits
Score difference with first non-orthologous sequence - C.familiaris:262 C.trachomatis:411

F1PD07              	100.00%		O84546              	100.00%
Bootstrap support for F1PD07 as seed ortholog is 100%.
Bootstrap support for O84546 as seed ortholog is 100%.

Group of orthologs #23. Best score 384 bits
Score difference with first non-orthologous sequence - C.familiaris:384 C.trachomatis:240

E2QYG6              	100.00%		O84310              	100.00%
Bootstrap support for E2QYG6 as seed ortholog is 100%.
Bootstrap support for O84310 as seed ortholog is 100%.

Group of orthologs #24. Best score 379 bits
Score difference with first non-orthologous sequence - C.familiaris:248 C.trachomatis:379

E2R3A4              	100.00%		O84098              	100.00%
Bootstrap support for E2R3A4 as seed ortholog is 100%.
Bootstrap support for O84098 as seed ortholog is 100%.

Group of orthologs #25. Best score 375 bits
Score difference with first non-orthologous sequence - C.familiaris:375 C.trachomatis:375

F1PQU2              	100.00%		O84831              	100.00%
Bootstrap support for F1PQU2 as seed ortholog is 100%.
Bootstrap support for O84831 as seed ortholog is 100%.

Group of orthologs #26. Best score 372 bits
Score difference with first non-orthologous sequence - C.familiaris:100 C.trachomatis:372

E2RC89              	100.00%		P0CE13              	100.00%
Q28259              	22.32%		
F1P7C9              	19.87%		
F1PYE8              	18.75%		
J9NW97              	15.40%		
J9P540              	15.18%		
F1PFN3              	14.73%		
J9P1C6              	13.17%		
J9NWZ6              	10.49%		
E2RNJ4              	8.71%		
J9P1L8              	8.04%		
J9P5N8              	7.14%		
J9NZ39              	6.47%		
Bootstrap support for E2RC89 as seed ortholog is 99%.
Bootstrap support for P0CE13 as seed ortholog is 100%.

Group of orthologs #27. Best score 372 bits
Score difference with first non-orthologous sequence - C.familiaris:278 C.trachomatis:372

E2RAS8              	100.00%		O84591              	100.00%
E2R5B2              	64.90%		
F1PCH3              	41.80%		
Bootstrap support for E2RAS8 as seed ortholog is 100%.
Bootstrap support for O84591 as seed ortholog is 100%.

Group of orthologs #28. Best score 359 bits
Score difference with first non-orthologous sequence - C.familiaris:359 C.trachomatis:359

E2QWK2              	100.00%		O84849              	100.00%
Bootstrap support for E2QWK2 as seed ortholog is 100%.
Bootstrap support for O84849 as seed ortholog is 100%.

Group of orthologs #29. Best score 336 bits
Score difference with first non-orthologous sequence - C.familiaris:336 C.trachomatis:336

E2R0Y5              	100.00%		O84829              	100.00%
Bootstrap support for E2R0Y5 as seed ortholog is 100%.
Bootstrap support for O84829 as seed ortholog is 100%.

Group of orthologs #30. Best score 324 bits
Score difference with first non-orthologous sequence - C.familiaris:324 C.trachomatis:324

E2QUD0              	100.00%		O84006              	100.00%
Bootstrap support for E2QUD0 as seed ortholog is 100%.
Bootstrap support for O84006 as seed ortholog is 100%.

Group of orthologs #31. Best score 319 bits
Score difference with first non-orthologous sequence - C.familiaris:106 C.trachomatis:319

E2R268              	100.00%		O84248              	100.00%
J9P208              	86.53%		
Bootstrap support for E2R268 as seed ortholog is 99%.
Bootstrap support for O84248 as seed ortholog is 100%.

Group of orthologs #32. Best score 316 bits
Score difference with first non-orthologous sequence - C.familiaris:244 C.trachomatis:316

E2RSP4              	100.00%		O84786              	100.00%
Bootstrap support for E2RSP4 as seed ortholog is 100%.
Bootstrap support for O84786 as seed ortholog is 100%.

Group of orthologs #33. Best score 314 bits
Score difference with first non-orthologous sequence - C.familiaris:149 C.trachomatis:314

P49819              	100.00%		O84561              	100.00%
Bootstrap support for P49819 as seed ortholog is 99%.
Bootstrap support for O84561 as seed ortholog is 100%.

Group of orthologs #34. Best score 311 bits
Score difference with first non-orthologous sequence - C.familiaris:311 C.trachomatis:311

F1PGJ3              	100.00%		O84823              	100.00%
F1PY49              	71.33%		
Bootstrap support for F1PGJ3 as seed ortholog is 100%.
Bootstrap support for O84823 as seed ortholog is 100%.

Group of orthologs #35. Best score 310 bits
Score difference with first non-orthologous sequence - C.familiaris:310 C.trachomatis:310

E2RNN5              	100.00%		P0CE09              	100.00%
E2RHZ2              	22.26%		
Bootstrap support for E2RNN5 as seed ortholog is 100%.
Bootstrap support for P0CE09 as seed ortholog is 100%.

Group of orthologs #36. Best score 308 bits
Score difference with first non-orthologous sequence - C.familiaris:149 C.trachomatis:308

E2QZ06              	100.00%		O84035              	100.00%
Bootstrap support for E2QZ06 as seed ortholog is 99%.
Bootstrap support for O84035 as seed ortholog is 100%.

Group of orthologs #37. Best score 305 bits
Score difference with first non-orthologous sequence - C.familiaris:305 C.trachomatis:305

E2RRC9              	100.00%		P0CD78              	100.00%
Bootstrap support for E2RRC9 as seed ortholog is 100%.
Bootstrap support for P0CD78 as seed ortholog is 100%.

Group of orthologs #38. Best score 299 bits
Score difference with first non-orthologous sequence - C.familiaris:299 C.trachomatis:299

F1PHR2              	100.00%		P0CE21              	100.00%
Q29536              	57.95%		
J9NV90              	41.92%		
Bootstrap support for F1PHR2 as seed ortholog is 100%.
Bootstrap support for P0CE21 as seed ortholog is 100%.

Group of orthologs #39. Best score 299 bits
Score difference with first non-orthologous sequence - C.familiaris:299 C.trachomatis:299

H9GW87              	100.00%		O84315              	100.00%
Bootstrap support for H9GW87 as seed ortholog is 100%.
Bootstrap support for O84315 as seed ortholog is 100%.

Group of orthologs #40. Best score 298 bits
Score difference with first non-orthologous sequence - C.familiaris:298 C.trachomatis:298

E2R866              	100.00%		O84775              	100.00%
Bootstrap support for E2R866 as seed ortholog is 100%.
Bootstrap support for O84775 as seed ortholog is 100%.

Group of orthologs #41. Best score 292 bits
Score difference with first non-orthologous sequence - C.familiaris:292 C.trachomatis:292

E2QUQ6              	100.00%		O84698              	100.00%
E2RLT9              	42.90%		
Bootstrap support for E2QUQ6 as seed ortholog is 100%.
Bootstrap support for O84698 as seed ortholog is 100%.

Group of orthologs #42. Best score 291 bits
Score difference with first non-orthologous sequence - C.familiaris:43 C.trachomatis:291

F1P9S9              	100.00%		O84797              	100.00%
Bootstrap support for F1P9S9 as seed ortholog is 72%.
Alternative seed ortholog is J9P5H1 (43 bits away from this cluster)
Bootstrap support for O84797 as seed ortholog is 100%.

Group of orthologs #43. Best score 279 bits
Score difference with first non-orthologous sequence - C.familiaris:279 C.trachomatis:279

F1PGS0              	100.00%		O84316              	100.00%
J9P629              	12.61%		
E2R0G4              	7.90%		
Bootstrap support for F1PGS0 as seed ortholog is 100%.
Bootstrap support for O84316 as seed ortholog is 100%.

Group of orthologs #44. Best score 279 bits
Score difference with first non-orthologous sequence - C.familiaris:279 C.trachomatis:279

E2QSS3              	100.00%		O84711              	100.00%
Bootstrap support for E2QSS3 as seed ortholog is 100%.
Bootstrap support for O84711 as seed ortholog is 100%.

Group of orthologs #45. Best score 278 bits
Score difference with first non-orthologous sequence - C.familiaris:158 C.trachomatis:114

E2RQS9              	100.00%		O84249              	100.00%
Bootstrap support for E2RQS9 as seed ortholog is 99%.
Bootstrap support for O84249 as seed ortholog is 99%.

Group of orthologs #46. Best score 275 bits
Score difference with first non-orthologous sequence - C.familiaris:275 C.trachomatis:275

E2RMJ5              	100.00%		O84451              	100.00%
Bootstrap support for E2RMJ5 as seed ortholog is 100%.
Bootstrap support for O84451 as seed ortholog is 100%.

Group of orthologs #47. Best score 265 bits
Score difference with first non-orthologous sequence - C.familiaris:265 C.trachomatis:265

E2RIV3              	100.00%		O84439              	100.00%
E2R4L7              	45.94%		
Bootstrap support for E2RIV3 as seed ortholog is 100%.
Bootstrap support for O84439 as seed ortholog is 100%.

Group of orthologs #48. Best score 260 bits
Score difference with first non-orthologous sequence - C.familiaris:260 C.trachomatis:260

F6V9U0              	100.00%		O84289              	100.00%
Bootstrap support for F6V9U0 as seed ortholog is 100%.
Bootstrap support for O84289 as seed ortholog is 100%.

Group of orthologs #49. Best score 257 bits
Score difference with first non-orthologous sequence - C.familiaris:257 C.trachomatis:257

E2R2C3              	100.00%		P0CD72              	100.00%
Bootstrap support for E2R2C3 as seed ortholog is 100%.
Bootstrap support for P0CD72 as seed ortholog is 100%.

Group of orthologs #50. Best score 257 bits
Score difference with first non-orthologous sequence - C.familiaris:257 C.trachomatis:257

J9P9E9              	100.00%		O84188              	100.00%
Bootstrap support for J9P9E9 as seed ortholog is 100%.
Bootstrap support for O84188 as seed ortholog is 100%.

Group of orthologs #51. Best score 252 bits
Score difference with first non-orthologous sequence - C.familiaris:170 C.trachomatis:252

E2QV08              	100.00%		O84381              	100.00%
Bootstrap support for E2QV08 as seed ortholog is 100%.
Bootstrap support for O84381 as seed ortholog is 100%.

Group of orthologs #52. Best score 249 bits
Score difference with first non-orthologous sequence - C.familiaris:183 C.trachomatis:130

E2R1W5              	100.00%		O84309              	100.00%
E2RAC6              	74.38%		
Bootstrap support for E2R1W5 as seed ortholog is 99%.
Bootstrap support for O84309 as seed ortholog is 99%.

Group of orthologs #53. Best score 249 bits
Score difference with first non-orthologous sequence - C.familiaris:249 C.trachomatis:249

F1PTK1              	100.00%		O84828              	100.00%
Bootstrap support for F1PTK1 as seed ortholog is 100%.
Bootstrap support for O84828 as seed ortholog is 100%.

Group of orthologs #54. Best score 248 bits
Score difference with first non-orthologous sequence - C.familiaris:248 C.trachomatis:69

E2QTM1              	100.00%		O84026              	100.00%
E2RAT2              	15.14%		
Bootstrap support for E2QTM1 as seed ortholog is 100%.
Bootstrap support for O84026 as seed ortholog is 98%.

Group of orthologs #55. Best score 248 bits
Score difference with first non-orthologous sequence - C.familiaris:123 C.trachomatis:100

E2R0H0              	100.00%		O84058              	100.00%
Bootstrap support for E2R0H0 as seed ortholog is 99%.
Bootstrap support for O84058 as seed ortholog is 99%.

Group of orthologs #56. Best score 247 bits
Score difference with first non-orthologous sequence - C.familiaris:133 C.trachomatis:247

J9P3Z1              	100.00%		O84548              	100.00%
Bootstrap support for J9P3Z1 as seed ortholog is 99%.
Bootstrap support for O84548 as seed ortholog is 100%.

Group of orthologs #57. Best score 241 bits
Score difference with first non-orthologous sequence - C.familiaris:241 C.trachomatis:241

E2RLM7              	100.00%		O84297              	100.00%
E2QV12              	50.53%		
Bootstrap support for E2RLM7 as seed ortholog is 100%.
Bootstrap support for O84297 as seed ortholog is 100%.

Group of orthologs #58. Best score 240 bits
Score difference with first non-orthologous sequence - C.familiaris:240 C.trachomatis:240

F6Y2L8              	100.00%		O84007              	100.00%
Bootstrap support for F6Y2L8 as seed ortholog is 100%.
Bootstrap support for O84007 as seed ortholog is 100%.

Group of orthologs #59. Best score 237 bits
Score difference with first non-orthologous sequence - C.familiaris:135 C.trachomatis:237

E2RS26              	100.00%		O84352              	100.00%
E2R3F9              	17.27%		
Bootstrap support for E2RS26 as seed ortholog is 99%.
Bootstrap support for O84352 as seed ortholog is 100%.

Group of orthologs #60. Best score 237 bits
Score difference with first non-orthologous sequence - C.familiaris:237 C.trachomatis:237

F1PI87              	100.00%		O84094              	100.00%
Bootstrap support for F1PI87 as seed ortholog is 100%.
Bootstrap support for O84094 as seed ortholog is 100%.

Group of orthologs #61. Best score 234 bits
Score difference with first non-orthologous sequence - C.familiaris:99 C.trachomatis:234

E2RLY5              	100.00%		O84049              	100.00%
Bootstrap support for E2RLY5 as seed ortholog is 98%.
Bootstrap support for O84049 as seed ortholog is 100%.

Group of orthologs #62. Best score 233 bits
Score difference with first non-orthologous sequence - C.familiaris:47 C.trachomatis:233

E2RIL3              	100.00%		O84423              	100.00%
Bootstrap support for E2RIL3 as seed ortholog is 93%.
Bootstrap support for O84423 as seed ortholog is 100%.

Group of orthologs #63. Best score 225 bits
Score difference with first non-orthologous sequence - C.familiaris:225 C.trachomatis:225

E2R257              	100.00%		O84562              	100.00%
Bootstrap support for E2R257 as seed ortholog is 100%.
Bootstrap support for O84562 as seed ortholog is 100%.

Group of orthologs #64. Best score 223 bits
Score difference with first non-orthologous sequence - C.familiaris:223 C.trachomatis:99

P61010              	100.00%		O84028              	100.00%
Bootstrap support for P61010 as seed ortholog is 100%.
Bootstrap support for O84028 as seed ortholog is 99%.

Group of orthologs #65. Best score 222 bits
Score difference with first non-orthologous sequence - C.familiaris:222 C.trachomatis:112

Q9N1R2              	100.00%		O84406              	100.00%
Q9N280              	55.48%		
F6XJD1              	31.26%		
F1PUW7              	30.80%		
J9P0G3              	28.49%		
F1Q0H9              	22.38%		
F1PPI5              	19.72%		
Bootstrap support for Q9N1R2 as seed ortholog is 100%.
Bootstrap support for O84406 as seed ortholog is 100%.

Group of orthologs #66. Best score 222 bits
Score difference with first non-orthologous sequence - C.familiaris:222 C.trachomatis:222

E2RQ65              	100.00%		O84081              	100.00%
J9NW23              	47.11%		
Bootstrap support for E2RQ65 as seed ortholog is 100%.
Bootstrap support for O84081 as seed ortholog is 100%.

Group of orthologs #67. Best score 219 bits
Score difference with first non-orthologous sequence - C.familiaris:219 C.trachomatis:219

E2R050              	100.00%		O84613              	100.00%
Bootstrap support for E2R050 as seed ortholog is 100%.
Bootstrap support for O84613 as seed ortholog is 100%.

Group of orthologs #68. Best score 218 bits
Score difference with first non-orthologous sequence - C.familiaris:218 C.trachomatis:218

E2RHU6              	100.00%		O84065              	100.00%
Bootstrap support for E2RHU6 as seed ortholog is 100%.
Bootstrap support for O84065 as seed ortholog is 100%.

Group of orthologs #69. Best score 215 bits
Score difference with first non-orthologous sequence - C.familiaris:215 C.trachomatis:215

F1Q0T9              	100.00%		O84787              	100.00%
F1PU34              	12.58%		
Bootstrap support for F1Q0T9 as seed ortholog is 100%.
Bootstrap support for O84787 as seed ortholog is 100%.

Group of orthologs #70. Best score 213 bits
Score difference with first non-orthologous sequence - C.familiaris:213 C.trachomatis:213

F1PZA0              	100.00%		O84638              	100.00%
Bootstrap support for F1PZA0 as seed ortholog is 100%.
Bootstrap support for O84638 as seed ortholog is 100%.

Group of orthologs #71. Best score 206 bits
Score difference with first non-orthologous sequence - C.familiaris:206 C.trachomatis:206

E2RGZ3              	100.00%		O84812              	100.00%
E2RT71              	18.77%		
Bootstrap support for E2RGZ3 as seed ortholog is 100%.
Bootstrap support for O84812 as seed ortholog is 100%.

Group of orthologs #72. Best score 205 bits
Score difference with first non-orthologous sequence - C.familiaris:205 C.trachomatis:205

J9JHF4              	100.00%		O84500              	100.00%
Bootstrap support for J9JHF4 as seed ortholog is 100%.
Bootstrap support for O84500 as seed ortholog is 100%.

Group of orthologs #73. Best score 203 bits
Score difference with first non-orthologous sequence - C.familiaris:203 C.trachomatis:203

F1PFF1              	100.00%		O84859              	100.00%
F1PSB4              	6.86%		
Bootstrap support for F1PFF1 as seed ortholog is 100%.
Bootstrap support for O84859 as seed ortholog is 100%.

Group of orthologs #74. Best score 200 bits
Score difference with first non-orthologous sequence - C.familiaris:200 C.trachomatis:200

F1Q1X9              	100.00%		O84596              	100.00%
Bootstrap support for F1Q1X9 as seed ortholog is 100%.
Bootstrap support for O84596 as seed ortholog is 100%.

Group of orthologs #75. Best score 194 bits
Score difference with first non-orthologous sequence - C.familiaris:194 C.trachomatis:194

F1P7B6              	100.00%		O84266              	100.00%
E2RHJ0              	24.07%		
E2R807              	15.48%		
F1PTN5              	12.77%		
F1PTP4              	11.07%		
Bootstrap support for F1P7B6 as seed ortholog is 100%.
Bootstrap support for O84266 as seed ortholog is 100%.

Group of orthologs #76. Best score 194 bits
Score difference with first non-orthologous sequence - C.familiaris:194 C.trachomatis:55

E2QUV8              	100.00%		O84712              	100.00%
Bootstrap support for E2QUV8 as seed ortholog is 100%.
Bootstrap support for O84712 as seed ortholog is 99%.

Group of orthologs #77. Best score 192 bits
Score difference with first non-orthologous sequence - C.familiaris:6 C.trachomatis:192

E2R511              	100.00%		O84345              	100.00%
Bootstrap support for E2R511 as seed ortholog is 67%.
Alternative seed ortholog is E2R7F3 (6 bits away from this cluster)
Bootstrap support for O84345 as seed ortholog is 100%.

Group of orthologs #78. Best score 192 bits
Score difference with first non-orthologous sequence - C.familiaris:192 C.trachomatis:192

F1PX32              	100.00%		O84874              	100.00%
Bootstrap support for F1PX32 as seed ortholog is 100%.
Bootstrap support for O84874 as seed ortholog is 100%.

Group of orthologs #79. Best score 191 bits
Score difference with first non-orthologous sequence - C.familiaris:191 C.trachomatis:191

E2RNA1              	100.00%		O84196              	100.00%
Bootstrap support for E2RNA1 as seed ortholog is 100%.
Bootstrap support for O84196 as seed ortholog is 100%.

Group of orthologs #80. Best score 191 bits
Score difference with first non-orthologous sequence - C.familiaris:191 C.trachomatis:191

J9P3R1              	100.00%		O84642              	100.00%
Bootstrap support for J9P3R1 as seed ortholog is 100%.
Bootstrap support for O84642 as seed ortholog is 100%.

Group of orthologs #81. Best score 189 bits
Score difference with first non-orthologous sequence - C.familiaris:189 C.trachomatis:189

E2RNY6              	100.00%		O84402              	100.00%
F1PK78              	13.38%		
F6XKS7              	9.36%		
Bootstrap support for E2RNY6 as seed ortholog is 100%.
Bootstrap support for O84402 as seed ortholog is 100%.

Group of orthologs #82. Best score 184 bits
Score difference with first non-orthologous sequence - C.familiaris:105 C.trachomatis:184

F1PCG4              	100.00%		O84608              	100.00%
E2RHG2              	61.06%		
J9P7L3              	52.65%		
E2RNL3              	46.46%		
E2RRD4              	35.84%		
J9PB41              	31.42%		
J9NXF3              	24.34%		
Bootstrap support for F1PCG4 as seed ortholog is 99%.
Bootstrap support for O84608 as seed ortholog is 100%.

Group of orthologs #83. Best score 183 bits
Score difference with first non-orthologous sequence - C.familiaris:15 C.trachomatis:183

E2QUT6              	100.00%		O84734              	100.00%
Bootstrap support for E2QUT6 as seed ortholog is 63%.
Alternative seed ortholog is E2R4D5 (15 bits away from this cluster)
Bootstrap support for O84734 as seed ortholog is 100%.

Group of orthologs #84. Best score 181 bits
Score difference with first non-orthologous sequence - C.familiaris:21 C.trachomatis:181

E2QWU7              	100.00%		P38004              	100.00%
Bootstrap support for E2QWU7 as seed ortholog is 75%.
Bootstrap support for P38004 as seed ortholog is 100%.

Group of orthologs #85. Best score 180 bits
Score difference with first non-orthologous sequence - C.familiaris:180 C.trachomatis:180

P54714              	100.00%		O84332              	100.00%
Bootstrap support for P54714 as seed ortholog is 100%.
Bootstrap support for O84332 as seed ortholog is 100%.

Group of orthologs #86. Best score 178 bits
Score difference with first non-orthologous sequence - C.familiaris:178 C.trachomatis:178

F1P8R8              	100.00%		O84234              	100.00%
E2RM38              	33.29%		
E2RIT2              	31.42%		
F1PA54              	29.56%		
E2RKV9              	27.12%		
P27799              	25.11%		
E2RKV4              	24.89%		
Q00589              	24.89%		
B6F0U1              	24.46%		
E2QVS9              	23.82%		
F1PXA1              	22.60%		
F1PPP6              	20.95%		
F1PZI9              	18.58%		
E2R9L9              	17.79%		
E2RIQ1              	15.42%		
E2RMQ1              	14.78%		
F1PFP5              	9.83%		
J9NVM9              	9.83%		
F1PPE0              	9.61%		
E2QRT2              	6.03%		
Bootstrap support for F1P8R8 as seed ortholog is 100%.
Bootstrap support for O84234 as seed ortholog is 100%.

Group of orthologs #87. Best score 176 bits
Score difference with first non-orthologous sequence - C.familiaris:176 C.trachomatis:176

J9P2L4              	100.00%		P18584              	100.00%
F1PLA0              	41.83%		
F1PCX9              	37.50%		
Q45FF7              	26.00%		
Bootstrap support for J9P2L4 as seed ortholog is 100%.
Bootstrap support for P18584 as seed ortholog is 100%.

Group of orthologs #88. Best score 167 bits
Score difference with first non-orthologous sequence - C.familiaris:116 C.trachomatis:167

J9P7C8              	100.00%		O84456              	100.00%
Bootstrap support for J9P7C8 as seed ortholog is 100%.
Bootstrap support for O84456 as seed ortholog is 100%.

Group of orthologs #89. Best score 164 bits
Score difference with first non-orthologous sequence - C.familiaris:45 C.trachomatis:164

E2QZR6              	100.00%		P0CD71              	100.00%
F1PM36              	14.33%		
F2Z4P4              	13.16%		
E2RJ31              	12.99%		
J9P9I7              	12.99%		
E2QW85              	12.91%		
E2RK38              	12.32%		
J9P5I0              	12.32%		
J9NRW9              	12.24%		
J9NU04              	12.24%		
J9P0C2              	12.24%		
J9NZ09              	11.74%		
J9NRT6              	10.90%		
E2R791              	10.73%		
E2R3K1              	9.64%		
J9P830              	9.30%		
J9NRN4              	9.22%		
E2RCM6              	8.72%		
J9NXW5              	8.72%		
J9JHJ9              	8.63%		
L7N0M6              	8.47%		
L7N0K5              	8.47%		
E2RB33              	7.21%		
J9NSK2              	7.12%		
E2QX79              	7.04%		
J9P051              	7.04%		
J9P4M3              	6.79%		
E2R2P3              	6.79%		
E2RCL0              	6.62%		
J9NUR3              	6.20%		
J9NZ11              	5.95%		
J9P1R1              	5.87%		
J9P3R3              	5.20%		
Bootstrap support for E2QZR6 as seed ortholog is 84%.
Bootstrap support for P0CD71 as seed ortholog is 100%.

Group of orthologs #90. Best score 164 bits
Score difference with first non-orthologous sequence - C.familiaris:164 C.trachomatis:164

E2RPT0              	100.00%		O84274              	100.00%
Bootstrap support for E2RPT0 as seed ortholog is 100%.
Bootstrap support for O84274 as seed ortholog is 100%.

Group of orthologs #91. Best score 158 bits
Score difference with first non-orthologous sequence - C.familiaris:158 C.trachomatis:158

F1P7W7              	100.00%		O84720              	100.00%
H9GWI8              	45.42%		
F1PY44              	21.65%		
J9P4E9              	16.07%		
Bootstrap support for F1P7W7 as seed ortholog is 100%.
Bootstrap support for O84720 as seed ortholog is 100%.

Group of orthologs #92. Best score 156 bits
Score difference with first non-orthologous sequence - C.familiaris:156 C.trachomatis:43

F1PAY2              	100.00%		O84260              	100.00%
F1PPG8              	7.68%		
Bootstrap support for F1PAY2 as seed ortholog is 100%.
Bootstrap support for O84260 as seed ortholog is 87%.

Group of orthologs #93. Best score 156 bits
Score difference with first non-orthologous sequence - C.familiaris:156 C.trachomatis:37

F1PE28              	100.00%		O84755              	100.00%
E2QX06              	57.21%		
Bootstrap support for F1PE28 as seed ortholog is 100%.
Bootstrap support for O84755 as seed ortholog is 73%.
Alternative seed ortholog is O84335 (37 bits away from this cluster)

Group of orthologs #94. Best score 156 bits
Score difference with first non-orthologous sequence - C.familiaris:156 C.trachomatis:156

F1PX47              	100.00%		O84383              	100.00%
Bootstrap support for F1PX47 as seed ortholog is 100%.
Bootstrap support for O84383 as seed ortholog is 100%.

Group of orthologs #95. Best score 153 bits
Score difference with first non-orthologous sequence - C.familiaris:153 C.trachomatis:153

E2RE04              	100.00%		O84704              	100.00%
Bootstrap support for E2RE04 as seed ortholog is 100%.
Bootstrap support for O84704 as seed ortholog is 100%.

Group of orthologs #96. Best score 153 bits
Score difference with first non-orthologous sequence - C.familiaris:153 C.trachomatis:153

F6V404              	100.00%		O84123              	100.00%
Bootstrap support for F6V404 as seed ortholog is 100%.
Bootstrap support for O84123 as seed ortholog is 100%.

Group of orthologs #97. Best score 152 bits
Score difference with first non-orthologous sequence - C.familiaris:107 C.trachomatis:152

E2QYX1              	100.00%		O84727              	100.00%
E2RT65              	39.43%		
H9GW55              	36.55%		
Bootstrap support for E2QYX1 as seed ortholog is 99%.
Bootstrap support for O84727 as seed ortholog is 100%.

Group of orthologs #98. Best score 149 bits
Score difference with first non-orthologous sequence - C.familiaris:149 C.trachomatis:149

E2QXP5              	100.00%		O84632              	100.00%
Bootstrap support for E2QXP5 as seed ortholog is 100%.
Bootstrap support for O84632 as seed ortholog is 100%.

Group of orthologs #99. Best score 146 bits
Score difference with first non-orthologous sequence - C.familiaris:46 C.trachomatis:146

E2RAT9              	100.00%		O84200              	100.00%
Bootstrap support for E2RAT9 as seed ortholog is 86%.
Bootstrap support for O84200 as seed ortholog is 100%.

Group of orthologs #100. Best score 143 bits
Score difference with first non-orthologous sequence - C.familiaris:143 C.trachomatis:143

E2RCH3              	100.00%		O84752              	100.00%
Bootstrap support for E2RCH3 as seed ortholog is 100%.
Bootstrap support for O84752 as seed ortholog is 100%.

Group of orthologs #101. Best score 136 bits
Score difference with first non-orthologous sequence - C.familiaris:136 C.trachomatis:136

E2RQ55              	100.00%		O84835              	100.00%
E2R7H9              	52.80%		
Bootstrap support for E2RQ55 as seed ortholog is 100%.
Bootstrap support for O84835 as seed ortholog is 100%.

Group of orthologs #102. Best score 134 bits
Score difference with first non-orthologous sequence - C.familiaris:83 C.trachomatis:134

E2RH50              	100.00%		O84589              	100.00%
Bootstrap support for E2RH50 as seed ortholog is 97%.
Bootstrap support for O84589 as seed ortholog is 100%.

Group of orthologs #103. Best score 133 bits
Score difference with first non-orthologous sequence - C.familiaris:133 C.trachomatis:133

J9NY98              	100.00%		O84732              	100.00%
E2QTW8              	61.43%		
E2RQY6              	17.71%		
O46674              	17.48%		
E2RRB2              	16.77%		
F1PL53              	13.56%		
F1PJF0              	12.74%		
F1P767              	12.57%		
P50997              	12.57%		
F1P8N4              	11.34%		
P50996              	11.05%		
E2RF35              	10.81%		
E2R7S1              	8.36%		
F1PHQ7              	7.71%		
E2R4W3              	7.66%		
Bootstrap support for J9NY98 as seed ortholog is 100%.
Bootstrap support for O84732 as seed ortholog is 100%.

Group of orthologs #104. Best score 128 bits
Score difference with first non-orthologous sequence - C.familiaris:37 C.trachomatis:128

E2RCD7              	100.00%		O84530              	100.00%
Bootstrap support for E2RCD7 as seed ortholog is 87%.
Bootstrap support for O84530 as seed ortholog is 100%.

Group of orthologs #105. Best score 128 bits
Score difference with first non-orthologous sequence - C.familiaris:128 C.trachomatis:128

F1PUF5              	100.00%		O84241              	100.00%
Bootstrap support for F1PUF5 as seed ortholog is 100%.
Bootstrap support for O84241 as seed ortholog is 100%.

Group of orthologs #106. Best score 127 bits
Score difference with first non-orthologous sequence - C.familiaris:127 C.trachomatis:127

F1P9A3              	100.00%		O84492              	100.00%
Bootstrap support for F1P9A3 as seed ortholog is 100%.
Bootstrap support for O84492 as seed ortholog is 100%.

Group of orthologs #107. Best score 126 bits
Score difference with first non-orthologous sequence - C.familiaris:126 C.trachomatis:126

E2RIS5              	100.00%		O84649              	100.00%
E2R770              	14.45%		
Bootstrap support for E2RIS5 as seed ortholog is 100%.
Bootstrap support for O84649 as seed ortholog is 100%.

Group of orthologs #108. Best score 126 bits
Score difference with first non-orthologous sequence - C.familiaris:126 C.trachomatis:126

F1Q3P4              	100.00%		O84771              	100.00%
Bootstrap support for F1Q3P4 as seed ortholog is 100%.
Bootstrap support for O84771 as seed ortholog is 100%.

Group of orthologs #109. Best score 125 bits
Score difference with first non-orthologous sequence - C.familiaris:125 C.trachomatis:125

F1PQM3              	100.00%		O84391              	100.00%
Bootstrap support for F1PQM3 as seed ortholog is 100%.
Bootstrap support for O84391 as seed ortholog is 100%.

Group of orthologs #110. Best score 124 bits
Score difference with first non-orthologous sequence - C.familiaris:32 C.trachomatis:124

E2RH37              	100.00%		O84130              	100.00%
F1PM22              	95.48%		
E2RND9              	92.77%		
E2QZU8              	71.39%		
F1PUU7              	70.48%		
E2RE39              	14.16%		
Bootstrap support for E2RH37 as seed ortholog is 84%.
Bootstrap support for O84130 as seed ortholog is 100%.

Group of orthologs #111. Best score 123 bits
Score difference with first non-orthologous sequence - C.familiaris:123 C.trachomatis:123

J9P6I2              	100.00%		O84864              	100.00%
F1PIC0              	8.05%		
E2RRQ1              	7.68%		
E2RSY4              	5.46%		
Bootstrap support for J9P6I2 as seed ortholog is 100%.
Bootstrap support for O84864 as seed ortholog is 100%.

Group of orthologs #112. Best score 118 bits
Score difference with first non-orthologous sequence - C.familiaris:118 C.trachomatis:118

E2RPW4              	100.00%		O84247              	100.00%
Bootstrap support for E2RPW4 as seed ortholog is 100%.
Bootstrap support for O84247 as seed ortholog is 100%.

Group of orthologs #113. Best score 116 bits
Score difference with first non-orthologous sequence - C.familiaris:41 C.trachomatis:116

Q50KA9              	100.00%		O84508              	100.00%
J9P4I5              	93.78%		
J9P3S5              	92.75%		
Q50KA8              	86.01%		
J9NWI3              	80.83%		
J9P9D9              	78.76%		
F1PYM1              	46.11%		
F1PEZ2              	36.79%		
J9P932              	34.72%		
Bootstrap support for Q50KA9 as seed ortholog is 97%.
Bootstrap support for O84508 as seed ortholog is 100%.

Group of orthologs #114. Best score 113 bits
Score difference with first non-orthologous sequence - C.familiaris:113 C.trachomatis:113

E2RFJ8              	100.00%		O84463              	100.00%
Bootstrap support for E2RFJ8 as seed ortholog is 100%.
Bootstrap support for O84463 as seed ortholog is 100%.

Group of orthologs #115. Best score 113 bits
Score difference with first non-orthologous sequence - C.familiaris:34 C.trachomatis:113

F1PUH4              	100.00%		O84599              	100.00%
Bootstrap support for F1PUH4 as seed ortholog is 84%.
Bootstrap support for O84599 as seed ortholog is 100%.

Group of orthologs #116. Best score 112 bits
Score difference with first non-orthologous sequence - C.familiaris:112 C.trachomatis:112

E2R8M0              	100.00%		O84710              	100.00%
                    	       		O84415              	6.44%
Bootstrap support for E2R8M0 as seed ortholog is 100%.
Bootstrap support for O84710 as seed ortholog is 100%.

Group of orthologs #117. Best score 112 bits
Score difference with first non-orthologous sequence - C.familiaris:51 C.trachomatis:112

E2QZY6              	100.00%		O84096              	100.00%
Bootstrap support for E2QZY6 as seed ortholog is 95%.
Bootstrap support for O84096 as seed ortholog is 100%.

Group of orthologs #118. Best score 108 bits
Score difference with first non-orthologous sequence - C.familiaris:108 C.trachomatis:108

J9P228              	100.00%		O84296              	100.00%
Bootstrap support for J9P228 as seed ortholog is 100%.
Bootstrap support for O84296 as seed ortholog is 100%.

Group of orthologs #119. Best score 105 bits
Score difference with first non-orthologous sequence - C.familiaris:105 C.trachomatis:105

E2R9C9              	100.00%		O84851              	100.00%
Bootstrap support for E2R9C9 as seed ortholog is 100%.
Bootstrap support for O84851 as seed ortholog is 100%.

Group of orthologs #120. Best score 105 bits
Score difference with first non-orthologous sequence - C.familiaris:56 C.trachomatis:105

E2RE10              	100.00%		P66370              	100.00%
Bootstrap support for E2RE10 as seed ortholog is 99%.
Bootstrap support for P66370 as seed ortholog is 100%.

Group of orthologs #121. Best score 104 bits
Score difference with first non-orthologous sequence - C.familiaris:104 C.trachomatis:104

F1P976              	100.00%		O84719              	100.00%
J9NS24              	69.21%		
Bootstrap support for F1P976 as seed ortholog is 100%.
Bootstrap support for O84719 as seed ortholog is 100%.

Group of orthologs #122. Best score 104 bits
Score difference with first non-orthologous sequence - C.familiaris:58 C.trachomatis:104

E2RFN7              	100.00%		P0CE06              	100.00%
Bootstrap support for E2RFN7 as seed ortholog is 97%.
Bootstrap support for P0CE06 as seed ortholog is 100%.

Group of orthologs #123. Best score 104 bits
Score difference with first non-orthologous sequence - C.familiaris:104 C.trachomatis:104

J9NX73              	100.00%		O84215              	100.00%
Bootstrap support for J9NX73 as seed ortholog is 100%.
Bootstrap support for O84215 as seed ortholog is 100%.

Group of orthologs #124. Best score 101 bits
Score difference with first non-orthologous sequence - C.familiaris:101 C.trachomatis:101

F1PTF0              	100.00%		O84033              	100.00%
Bootstrap support for F1PTF0 as seed ortholog is 100%.
Bootstrap support for O84033 as seed ortholog is 100%.

Group of orthologs #125. Best score 98 bits
Score difference with first non-orthologous sequence - C.familiaris:98 C.trachomatis:98

E2R4S6              	100.00%		O84350              	100.00%
Bootstrap support for E2R4S6 as seed ortholog is 100%.
Bootstrap support for O84350 as seed ortholog is 100%.

Group of orthologs #126. Best score 97 bits
Score difference with first non-orthologous sequence - C.familiaris:56 C.trachomatis:97

E2RF32              	100.00%		O84390              	100.00%
J9P9J0              	23.56%		
J9NS50              	8.44%		
Bootstrap support for E2RF32 as seed ortholog is 99%.
Bootstrap support for O84390 as seed ortholog is 100%.

Group of orthologs #127. Best score 97 bits
Score difference with first non-orthologous sequence - C.familiaris:97 C.trachomatis:97

E2RTD6              	100.00%		O84301              	100.00%
Bootstrap support for E2RTD6 as seed ortholog is 100%.
Bootstrap support for O84301 as seed ortholog is 100%.

Group of orthologs #128. Best score 97 bits
Score difference with first non-orthologous sequence - C.familiaris:97 C.trachomatis:97

F1PQ26              	100.00%		P55137              	100.00%
Bootstrap support for F1PQ26 as seed ortholog is 100%.
Bootstrap support for P55137 as seed ortholog is 100%.

Group of orthologs #129. Best score 96 bits
Score difference with first non-orthologous sequence - C.familiaris:96 C.trachomatis:96

E2QU31              	100.00%		O84843              	100.00%
Bootstrap support for E2QU31 as seed ortholog is 100%.
Bootstrap support for O84843 as seed ortholog is 100%.

Group of orthologs #130. Best score 96 bits
Score difference with first non-orthologous sequence - C.familiaris:30 C.trachomatis:96

E2R6F3              	100.00%		P0CE03              	100.00%
Bootstrap support for E2R6F3 as seed ortholog is 95%.
Bootstrap support for P0CE03 as seed ortholog is 100%.

Group of orthologs #131. Best score 95 bits
Score difference with first non-orthologous sequence - C.familiaris:95 C.trachomatis:95

F1PH18              	100.00%		O84782              	100.00%
F1P796              	18.18%		
E2RCJ8              	15.68%		
F1PVM3              	11.07%		
E2RSR1              	10.54%		
E2RKV3              	5.14%		
Bootstrap support for F1PH18 as seed ortholog is 100%.
Bootstrap support for O84782 as seed ortholog is 100%.

Group of orthologs #132. Best score 94 bits
Score difference with first non-orthologous sequence - C.familiaris:94 C.trachomatis:94

F1Q2A2              	100.00%		O84212              	100.00%
E2QZD7              	10.34%		
Bootstrap support for F1Q2A2 as seed ortholog is 100%.
Bootstrap support for O84212 as seed ortholog is 100%.

Group of orthologs #133. Best score 94 bits
Score difference with first non-orthologous sequence - C.familiaris:94 C.trachomatis:94

E2RN04              	100.00%		P0CD79              	100.00%
Bootstrap support for E2RN04 as seed ortholog is 100%.
Bootstrap support for P0CD79 as seed ortholog is 100%.

Group of orthologs #134. Best score 92 bits
Score difference with first non-orthologous sequence - C.familiaris:92 C.trachomatis:92

F1PHF1              	100.00%		O84687              	100.00%
Bootstrap support for F1PHF1 as seed ortholog is 100%.
Bootstrap support for O84687 as seed ortholog is 100%.

Group of orthologs #135. Best score 92 bits
Score difference with first non-orthologous sequence - C.familiaris:47 C.trachomatis:92

J9P2R9              	100.00%		O84435              	100.00%
Bootstrap support for J9P2R9 as seed ortholog is 92%.
Bootstrap support for O84435 as seed ortholog is 100%.

Group of orthologs #136. Best score 91 bits
Score difference with first non-orthologous sequence - C.familiaris:25 C.trachomatis:91

E2RQC3              	100.00%		O84358              	100.00%
Bootstrap support for E2RQC3 as seed ortholog is 75%.
Bootstrap support for O84358 as seed ortholog is 100%.

Group of orthologs #137. Best score 90 bits
Score difference with first non-orthologous sequence - C.familiaris:90 C.trachomatis:90

E2RR88              	100.00%		O84806              	100.00%
Bootstrap support for E2RR88 as seed ortholog is 100%.
Bootstrap support for O84806 as seed ortholog is 100%.

Group of orthologs #138. Best score 90 bits
Score difference with first non-orthologous sequence - C.familiaris:17 C.trachomatis:90

J9P592              	100.00%		O84469              	100.00%
Bootstrap support for J9P592 as seed ortholog is 67%.
Alternative seed ortholog is E2RGS6 (17 bits away from this cluster)
Bootstrap support for O84469 as seed ortholog is 100%.

Group of orthologs #139. Best score 87 bits
Score difference with first non-orthologous sequence - C.familiaris:87 C.trachomatis:87

E2RBT1              	100.00%		O84321              	100.00%
Bootstrap support for E2RBT1 as seed ortholog is 100%.
Bootstrap support for O84321 as seed ortholog is 100%.

Group of orthologs #140. Best score 87 bits
Score difference with first non-orthologous sequence - C.familiaris:87 C.trachomatis:87

E2RK46              	100.00%		O84027              	100.00%
Bootstrap support for E2RK46 as seed ortholog is 100%.
Bootstrap support for O84027 as seed ortholog is 100%.

Group of orthologs #141. Best score 85 bits
Score difference with first non-orthologous sequence - C.familiaris:85 C.trachomatis:85

E2RG94              	100.00%		O84750              	100.00%
Bootstrap support for E2RG94 as seed ortholog is 100%.
Bootstrap support for O84750 as seed ortholog is 100%.

Group of orthologs #142. Best score 84 bits
Score difference with first non-orthologous sequence - C.familiaris:84 C.trachomatis:84

F1PBM5              	100.00%		O84686              	100.00%
J9JHC7              	43.75%		
Bootstrap support for F1PBM5 as seed ortholog is 100%.
Bootstrap support for O84686 as seed ortholog is 100%.

Group of orthologs #143. Best score 84 bits
Score difference with first non-orthologous sequence - C.familiaris:84 C.trachomatis:84

F1PSR5              	100.00%		O84535              	100.00%
Bootstrap support for F1PSR5 as seed ortholog is 100%.
Bootstrap support for O84535 as seed ortholog is 100%.

Group of orthologs #144. Best score 83 bits
Score difference with first non-orthologous sequence - C.familiaris:83 C.trachomatis:83

F1Q3W8              	100.00%		O84595              	100.00%
Bootstrap support for F1Q3W8 as seed ortholog is 100%.
Bootstrap support for O84595 as seed ortholog is 100%.

Group of orthologs #145. Best score 82 bits
Score difference with first non-orthologous sequence - C.familiaris:82 C.trachomatis:82

E2QXJ5              	100.00%		O84307              	100.00%
E2R360              	48.20%		
F1PVU4              	43.28%		
E2RR34              	42.27%		
Bootstrap support for E2QXJ5 as seed ortholog is 100%.
Bootstrap support for O84307 as seed ortholog is 100%.

Group of orthologs #146. Best score 82 bits
Score difference with first non-orthologous sequence - C.familiaris:82 C.trachomatis:82

E2RRF8              	100.00%		O84294              	100.00%
Bootstrap support for E2RRF8 as seed ortholog is 100%.
Bootstrap support for O84294 as seed ortholog is 100%.

Group of orthologs #147. Best score 82 bits
Score difference with first non-orthologous sequence - C.familiaris:82 C.trachomatis:82

F1P698              	100.00%		O84865              	100.00%
Bootstrap support for F1P698 as seed ortholog is 100%.
Bootstrap support for O84865 as seed ortholog is 100%.

Group of orthologs #148. Best score 81 bits
Score difference with first non-orthologous sequence - C.familiaris:81 C.trachomatis:81

F6ULR2              	100.00%		O84338              	100.00%
E2RCF4              	20.74%		
E2R2M6              	17.34%		
Bootstrap support for F6ULR2 as seed ortholog is 100%.
Bootstrap support for O84338 as seed ortholog is 100%.

Group of orthologs #149. Best score 81 bits
Score difference with first non-orthologous sequence - C.familiaris:81 C.trachomatis:81

E2QZ69              	100.00%		O84547              	100.00%
F6XKV4              	69.06%		
Bootstrap support for E2QZ69 as seed ortholog is 100%.
Bootstrap support for O84547 as seed ortholog is 100%.

Group of orthologs #150. Best score 81 bits
Score difference with first non-orthologous sequence - C.familiaris:81 C.trachomatis:81

J9JHQ3              	100.00%		O84499              	100.00%
Bootstrap support for J9JHQ3 as seed ortholog is 100%.
Bootstrap support for O84499 as seed ortholog is 100%.

Group of orthologs #151. Best score 80 bits
Score difference with first non-orthologous sequence - C.familiaris:80 C.trachomatis:80

E2RLQ6              	100.00%		O84189              	100.00%
Bootstrap support for E2RLQ6 as seed ortholog is 100%.
Bootstrap support for O84189 as seed ortholog is 100%.

Group of orthologs #152. Best score 79 bits
Score difference with first non-orthologous sequence - C.familiaris:79 C.trachomatis:79

E2R429              	100.00%		O84533              	100.00%
Bootstrap support for E2R429 as seed ortholog is 100%.
Bootstrap support for O84533 as seed ortholog is 100%.

Group of orthologs #153. Best score 79 bits
Score difference with first non-orthologous sequence - C.familiaris:79 C.trachomatis:79

J9NYK6              	100.00%		O84468              	100.00%
Bootstrap support for J9NYK6 as seed ortholog is 100%.
Bootstrap support for O84468 as seed ortholog is 100%.

Group of orthologs #154. Best score 79 bits
Score difference with first non-orthologous sequence - C.familiaris:79 C.trachomatis:79

J9P4A1              	100.00%		O84611              	100.00%
Bootstrap support for J9P4A1 as seed ortholog is 100%.
Bootstrap support for O84611 as seed ortholog is 100%.

Group of orthologs #155. Best score 78 bits
Score difference with first non-orthologous sequence - C.familiaris:78 C.trachomatis:78

J9P265              	100.00%		O84684              	100.00%
Bootstrap support for J9P265 as seed ortholog is 100%.
Bootstrap support for O84684 as seed ortholog is 100%.

Group of orthologs #156. Best score 73 bits
Score difference with first non-orthologous sequence - C.familiaris:73 C.trachomatis:73

E2RKU2              	100.00%		O84650              	100.00%
E2RRJ8              	100.00%		
Bootstrap support for E2RKU2 as seed ortholog is 100%.
Bootstrap support for E2RRJ8 as seed ortholog is 100%.
Bootstrap support for O84650 as seed ortholog is 100%.

Group of orthologs #157. Best score 73 bits
Score difference with first non-orthologous sequence - C.familiaris:73 C.trachomatis:73

E2RMB2              	100.00%		O84792              	100.00%
J9P052              	87.57%		
Bootstrap support for E2RMB2 as seed ortholog is 100%.
Bootstrap support for O84792 as seed ortholog is 100%.

Group of orthologs #158. Best score 73 bits
Score difference with first non-orthologous sequence - C.familiaris:73 C.trachomatis:73

F1PNS6              	100.00%		O84578              	100.00%
E2RB50              	9.46%		
Bootstrap support for F1PNS6 as seed ortholog is 100%.
Bootstrap support for O84578 as seed ortholog is 100%.

Group of orthologs #159. Best score 72 bits
Score difference with first non-orthologous sequence - C.familiaris:72 C.trachomatis:72

E2RAZ6              	100.00%		P36424              	100.00%
J9NXW4              	25.58%		
Bootstrap support for E2RAZ6 as seed ortholog is 100%.
Bootstrap support for P36424 as seed ortholog is 100%.

Group of orthologs #160. Best score 72 bits
Score difference with first non-orthologous sequence - C.familiaris:72 C.trachomatis:72

E2QX23              	100.00%		O84703              	100.00%
Bootstrap support for E2QX23 as seed ortholog is 100%.
Bootstrap support for O84703 as seed ortholog is 100%.

Group of orthologs #161. Best score 72 bits
Score difference with first non-orthologous sequence - C.familiaris:72 C.trachomatis:72

E2R7K0              	100.00%		O84108              	100.00%
Bootstrap support for E2R7K0 as seed ortholog is 100%.
Bootstrap support for O84108 as seed ortholog is 100%.

Group of orthologs #162. Best score 72 bits
Score difference with first non-orthologous sequence - C.familiaris:72 C.trachomatis:72

J9NUA4              	100.00%		O84357              	100.00%
Bootstrap support for J9NUA4 as seed ortholog is 100%.
Bootstrap support for O84357 as seed ortholog is 100%.

Group of orthologs #163. Best score 71 bits
Score difference with first non-orthologous sequence - C.familiaris:27 C.trachomatis:71

F1PVY8              	100.00%		O84366              	100.00%
Bootstrap support for F1PVY8 as seed ortholog is 81%.
Bootstrap support for O84366 as seed ortholog is 100%.

Group of orthologs #164. Best score 69 bits
Score difference with first non-orthologous sequence - C.familiaris:69 C.trachomatis:69

F6XEH2              	100.00%		O84665              	100.00%
J9NWF9              	8.51%		
Bootstrap support for F6XEH2 as seed ortholog is 100%.
Bootstrap support for O84665 as seed ortholog is 100%.

Group of orthologs #165. Best score 69 bits
Score difference with first non-orthologous sequence - C.familiaris:69 C.trachomatis:69

E2R8D0              	100.00%		O84139              	100.00%
Bootstrap support for E2R8D0 as seed ortholog is 100%.
Bootstrap support for O84139 as seed ortholog is 100%.

Group of orthologs #166. Best score 68 bits
Score difference with first non-orthologous sequence - C.familiaris:18 C.trachomatis:68

J9P897              	100.00%		P0CD81              	100.00%
Q9XSU3              	96.23%		
Bootstrap support for J9P897 as seed ortholog is 76%.
Bootstrap support for P0CD81 as seed ortholog is 100%.

Group of orthologs #167. Best score 67 bits
Score difference with first non-orthologous sequence - C.familiaris:26 C.trachomatis:67

E2R463              	100.00%		O84781              	100.00%
F1PTR5              	59.88%		
E2QUL3              	57.43%		
J9P9G0              	18.57%		
F1PEH9              	18.42%		
F1PS77              	8.32%		
J9P5C3              	8.25%		
J9JHP6              	5.57%		
Bootstrap support for E2R463 as seed ortholog is 69%.
Alternative seed ortholog is F1PUA2 (26 bits away from this cluster)
Bootstrap support for O84781 as seed ortholog is 100%.

Group of orthologs #168. Best score 67 bits
Score difference with first non-orthologous sequence - C.familiaris:67 C.trachomatis:67

E2QZ57              	100.00%		O84842              	100.00%
Bootstrap support for E2QZ57 as seed ortholog is 100%.
Bootstrap support for O84842 as seed ortholog is 100%.

Group of orthologs #169. Best score 66 bits
Score difference with first non-orthologous sequence - C.familiaris:66 C.trachomatis:66

F1Q3S9              	100.00%		O84210              	100.00%
P52784              	71.50%		O84208              	28.57%
F1PKS3              	65.90%		
Bootstrap support for F1Q3S9 as seed ortholog is 100%.
Bootstrap support for O84210 as seed ortholog is 100%.

Group of orthologs #170. Best score 66 bits
Score difference with first non-orthologous sequence - C.familiaris:66 C.trachomatis:66

F1PCB9              	100.00%		O84284              	100.00%
Bootstrap support for F1PCB9 as seed ortholog is 100%.
Bootstrap support for O84284 as seed ortholog is 100%.

Group of orthologs #171. Best score 65 bits
Score difference with first non-orthologous sequence - C.familiaris:65 C.trachomatis:65

E2RDI7              	100.00%		O84840              	100.00%
Bootstrap support for E2RDI7 as seed ortholog is 100%.
Bootstrap support for O84840 as seed ortholog is 100%.

Group of orthologs #172. Best score 65 bits
Score difference with first non-orthologous sequence - C.familiaris:24 C.trachomatis:65

E2RT81              	100.00%		O84127              	100.00%
Bootstrap support for E2RT81 as seed ortholog is 87%.
Bootstrap support for O84127 as seed ortholog is 100%.

Group of orthologs #173. Best score 65 bits
Score difference with first non-orthologous sequence - C.familiaris:65 C.trachomatis:65

Q5TJE9              	100.00%		P0CE04              	100.00%
Bootstrap support for Q5TJE9 as seed ortholog is 100%.
Bootstrap support for P0CE04 as seed ortholog is 100%.

Group of orthologs #174. Best score 64 bits
Score difference with first non-orthologous sequence - C.familiaris:10 C.trachomatis:64

E2R9R5              	100.00%		P26623              	100.00%
F1PYQ2              	14.80%		
J9PAF0              	14.35%		
E2RQS7              	13.45%		
F1PWN3              	11.66%		
E2RRA4              	10.76%		
E2RQC6              	8.97%		
Bootstrap support for E2R9R5 as seed ortholog is 66%.
Alternative seed ortholog is J9NSB8 (10 bits away from this cluster)
Bootstrap support for P26623 as seed ortholog is 100%.

Group of orthologs #175. Best score 64 bits
Score difference with first non-orthologous sequence - C.familiaris:64 C.trachomatis:64

F1PKR6              	100.00%		O84128              	100.00%
Bootstrap support for F1PKR6 as seed ortholog is 100%.
Bootstrap support for O84128 as seed ortholog is 100%.

Group of orthologs #176. Best score 64 bits
Score difference with first non-orthologous sequence - C.familiaris:64 C.trachomatis:64

J9P3C8              	100.00%		P0C0Z8              	100.00%
Bootstrap support for J9P3C8 as seed ortholog is 100%.
Bootstrap support for P0C0Z8 as seed ortholog is 100%.

Group of orthologs #177. Best score 62 bits
Score difference with first non-orthologous sequence - C.familiaris:62 C.trachomatis:62

F1PH98              	100.00%		O84218              	100.00%
E2RAY2              	43.57%		
F1PEX1              	42.12%		
F1P9B1              	41.08%		
F1PXQ4              	40.15%		
F6PNY8              	34.85%		
F1PAQ6              	34.65%		
F1PI31              	13.80%		
Bootstrap support for F1PH98 as seed ortholog is 100%.
Bootstrap support for O84218 as seed ortholog is 100%.

Group of orthologs #178. Best score 62 bits
Score difference with first non-orthologous sequence - C.familiaris:7 C.trachomatis:62

F1PV51              	100.00%		O84633              	100.00%
J9NVK1              	5.13%		
Bootstrap support for F1PV51 as seed ortholog is 60%.
Alternative seed ortholog is E2R3P8 (7 bits away from this cluster)
Bootstrap support for O84633 as seed ortholog is 100%.

Group of orthologs #179. Best score 62 bits
Score difference with first non-orthologous sequence - C.familiaris:62 C.trachomatis:62

E2RQ67              	100.00%		O84320              	100.00%
Bootstrap support for E2RQ67 as seed ortholog is 100%.
Bootstrap support for O84320 as seed ortholog is 100%.

Group of orthologs #180. Best score 61 bits
Score difference with first non-orthologous sequence - C.familiaris:61 C.trachomatis:61

E2QYN8              	100.00%		P0CD84              	100.00%
Bootstrap support for E2QYN8 as seed ortholog is 100%.
Bootstrap support for P0CD84 as seed ortholog is 100%.

Group of orthologs #181. Best score 61 bits
Score difference with first non-orthologous sequence - C.familiaris:61 C.trachomatis:61

J9P7G7              	100.00%		O84544              	100.00%
Bootstrap support for J9P7G7 as seed ortholog is 100%.
Bootstrap support for O84544 as seed ortholog is 100%.

Group of orthologs #182. Best score 60 bits
Score difference with first non-orthologous sequence - C.familiaris:7 C.trachomatis:60

F1PUL4              	100.00%		O84822              	100.00%
F1PBZ5              	59.86%		
Bootstrap support for F1PUL4 as seed ortholog is 70%.
Alternative seed ortholog is E2R5Z9 (7 bits away from this cluster)
Bootstrap support for O84822 as seed ortholog is 100%.

Group of orthologs #183. Best score 60 bits
Score difference with first non-orthologous sequence - C.familiaris:60 C.trachomatis:60

F6UY05              	100.00%		O84658              	100.00%
Bootstrap support for F6UY05 as seed ortholog is 100%.
Bootstrap support for O84658 as seed ortholog is 100%.

Group of orthologs #184. Best score 59 bits
Score difference with first non-orthologous sequence - C.familiaris:59 C.trachomatis:59

E2RA79              	100.00%		O84826              	100.00%
E2RNH4              	25.28%		
F1P7R2              	24.17%		
F1P9Q3              	21.77%		
E2R4D8              	10.89%		
Bootstrap support for E2RA79 as seed ortholog is 100%.
Bootstrap support for O84826 as seed ortholog is 100%.

Group of orthologs #185. Best score 59 bits
Score difference with first non-orthologous sequence - C.familiaris:59 C.trachomatis:59

E2RPG4              	100.00%		O84395              	100.00%
E2RQD3              	46.55%		
Bootstrap support for E2RPG4 as seed ortholog is 100%.
Bootstrap support for O84395 as seed ortholog is 100%.

Group of orthologs #186. Best score 59 bits
Score difference with first non-orthologous sequence - C.familiaris:59 C.trachomatis:59

J9NS54              	100.00%		O84029              	100.00%
F1PT11              	30.40%		
Bootstrap support for J9NS54 as seed ortholog is 100%.
Bootstrap support for O84029 as seed ortholog is 100%.

Group of orthologs #187. Best score 59 bits
Score difference with first non-orthologous sequence - C.familiaris:59 C.trachomatis:59

J9NSP6              	100.00%		P0CD83              	100.00%
J9NVJ0              	100.00%		
Bootstrap support for J9NSP6 as seed ortholog is 100%.
Bootstrap support for J9NVJ0 as seed ortholog is 100%.
Bootstrap support for P0CD83 as seed ortholog is 100%.

Group of orthologs #188. Best score 58 bits
Score difference with first non-orthologous sequence - C.familiaris:58 C.trachomatis:58

E2QST0              	100.00%		O84557              	100.00%
J9P4A4              	18.81%		
Bootstrap support for E2QST0 as seed ortholog is 100%.
Bootstrap support for O84557 as seed ortholog is 100%.

Group of orthologs #189. Best score 57 bits
Score difference with first non-orthologous sequence - C.familiaris:57 C.trachomatis:57

F1PB94              	100.00%		O84532              	100.00%
Bootstrap support for F1PB94 as seed ortholog is 100%.
Bootstrap support for O84532 as seed ortholog is 100%.

Group of orthologs #190. Best score 56 bits
Score difference with first non-orthologous sequence - C.familiaris:7 C.trachomatis:56

J9P9Z7              	100.00%		P0CE02              	100.00%
E2RAR8              	68.68%		
Bootstrap support for J9P9Z7 as seed ortholog is 62%.
Alternative seed ortholog is F1PBB7 (7 bits away from this cluster)
Bootstrap support for P0CE02 as seed ortholog is 100%.

Group of orthologs #191. Best score 56 bits
Score difference with first non-orthologous sequence - C.familiaris:56 C.trachomatis:56

E2RH47              	100.00%		O84527              	100.00%
Bootstrap support for E2RH47 as seed ortholog is 100%.
Bootstrap support for O84527 as seed ortholog is 100%.

Group of orthologs #192. Best score 55 bits
Score difference with first non-orthologous sequence - C.familiaris:55 C.trachomatis:55

F1Q1T5              	100.00%		P66480              	100.00%
Bootstrap support for F1Q1T5 as seed ortholog is 100%.
Bootstrap support for P66480 as seed ortholog is 100%.

Group of orthologs #193. Best score 54 bits
Score difference with first non-orthologous sequence - C.familiaris:54 C.trachomatis:54

E2RHG6              	100.00%		O84689              	100.00%
Bootstrap support for E2RHG6 as seed ortholog is 100%.
Bootstrap support for O84689 as seed ortholog is 100%.

Group of orthologs #194. Best score 52 bits
Score difference with first non-orthologous sequence - C.familiaris:52 C.trachomatis:52

E2RD63              	100.00%		O84160              	100.00%
                    	       		O84159              	20.71%
                    	       		O84156              	12.62%
                    	       		O84086              	11.43%
                    	       		O84157              	5.71%
Bootstrap support for E2RD63 as seed ortholog is 100%.
Bootstrap support for O84160 as seed ortholog is 100%.

Group of orthologs #195. Best score 51 bits
Score difference with first non-orthologous sequence - C.familiaris:51 C.trachomatis:51

E2RLB4              	100.00%		O84205              	100.00%
                    	       		O84695              	21.20%
                    	       		O84204              	18.43%
                    	       		O84696              	18.20%
                    	       		O84132              	11.06%
                    	       		O84071              	6.45%
                    	       		O84154              	5.99%
                    	       		O84421              	5.53%
Bootstrap support for E2RLB4 as seed ortholog is 100%.
Bootstrap support for O84205 as seed ortholog is 100%.

Group of orthologs #196. Best score 51 bits
Score difference with first non-orthologous sequence - C.familiaris:51 C.trachomatis:51

E2RQK5              	100.00%		O84032              	100.00%
Bootstrap support for E2RQK5 as seed ortholog is 100%.
Bootstrap support for O84032 as seed ortholog is 100%.

Group of orthologs #197. Best score 51 bits
Score difference with first non-orthologous sequence - C.familiaris:51 C.trachomatis:51

J9P092              	100.00%		O84618              	100.00%
Bootstrap support for J9P092 as seed ortholog is 100%.
Bootstrap support for O84618 as seed ortholog is 100%.

Group of orthologs #198. Best score 50 bits
Score difference with first non-orthologous sequence - C.familiaris:50 C.trachomatis:50

E2RK50              	100.00%		P0CD80              	100.00%
Q8MKI8              	45.56%		
F1PMI7              	7.43%		
Bootstrap support for E2RK50 as seed ortholog is 100%.
Bootstrap support for P0CD80 as seed ortholog is 100%.

Group of orthologs #199. Best score 50 bits
Score difference with first non-orthologous sequence - C.familiaris:50 C.trachomatis:50

E2R1F6              	100.00%		O84459              	100.00%
E2RCA0              	40.12%		
Bootstrap support for E2R1F6 as seed ortholog is 100%.
Bootstrap support for O84459 as seed ortholog is 100%.

Group of orthologs #200. Best score 49 bits
Score difference with first non-orthologous sequence - C.familiaris:49 C.trachomatis:49

F1Q1N7              	100.00%		O84219              	100.00%
E2RRU8              	69.07%		
Bootstrap support for F1Q1N7 as seed ortholog is 100%.
Bootstrap support for O84219 as seed ortholog is 100%.

Group of orthologs #201. Best score 49 bits
Score difference with first non-orthologous sequence - C.familiaris:49 C.trachomatis:49

E2RR20              	100.00%		O84655              	100.00%
Bootstrap support for E2RR20 as seed ortholog is 100%.
Bootstrap support for O84655 as seed ortholog is 100%.

Group of orthologs #202. Best score 48 bits
Score difference with first non-orthologous sequence - C.familiaris:48 C.trachomatis:48

J9NWA9              	100.00%		O84776              	100.00%
Bootstrap support for J9NWA9 as seed ortholog is 100%.
Bootstrap support for O84776 as seed ortholog is 100%.

Group of orthologs #203. Best score 45 bits
Score difference with first non-orthologous sequence - C.familiaris:45 C.trachomatis:45

J9P0D3              	100.00%		P0A4C8              	100.00%
E2QWY6              	85.45%		
J9PAX1              	52.32%		
J9P3M6              	42.02%		
E2QWF1              	35.35%		
F1PW41              	32.12%		
Bootstrap support for J9P0D3 as seed ortholog is 100%.
Bootstrap support for P0A4C8 as seed ortholog is 100%.

Group of orthologs #204. Best score 45 bits
Score difference with first non-orthologous sequence - C.familiaris:45 C.trachomatis:45

F6X690              	100.00%		O84496              	100.00%
E2R1D1              	21.11%		
Bootstrap support for F6X690 as seed ortholog is 100%.
Bootstrap support for O84496 as seed ortholog is 100%.

Group of orthologs #205. Best score 44 bits
Score difference with first non-orthologous sequence - C.familiaris:44 C.trachomatis:44

F1Q141              	100.00%		O84263              	100.00%
                    	       		O84541              	13.89%
Bootstrap support for F1Q141 as seed ortholog is 100%.
Bootstrap support for O84263 as seed ortholog is 100%.