###################################
190 groups of orthologs
240 in-paralogs from C.cinerea
195 in-paralogs from C.trachomatis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 841 bits
Score difference with first non-orthologous sequence - C.cinerea:582 C.trachomatis:728

A8N786              	100.00%		O84022              	100.00%
Bootstrap support for A8N786 as seed ortholog is 100%.
Bootstrap support for O84022 as seed ortholog is 100%.

Group of orthologs #2. Best score 727 bits
Score difference with first non-orthologous sequence - C.cinerea:727 C.trachomatis:727

A8NKJ5              	100.00%		O84250              	100.00%
Bootstrap support for A8NKJ5 as seed ortholog is 100%.
Bootstrap support for O84250 as seed ortholog is 100%.

Group of orthologs #3. Best score 678 bits
Score difference with first non-orthologous sequence - C.cinerea:98 C.trachomatis:140

A8N1G1              	100.00%		O84115              	100.00%
Bootstrap support for A8N1G1 as seed ortholog is 97%.
Bootstrap support for O84115 as seed ortholog is 99%.

Group of orthologs #4. Best score 659 bits
Score difference with first non-orthologous sequence - C.cinerea:125 C.trachomatis:605

A8N722              	100.00%		P17821              	100.00%
Bootstrap support for A8N722 as seed ortholog is 99%.
Bootstrap support for P17821 as seed ortholog is 100%.

Group of orthologs #5. Best score 571 bits
Score difference with first non-orthologous sequence - C.cinerea:476 C.trachomatis:386

A8PB53              	100.00%		P0C0Z7              	100.00%
Bootstrap support for A8PB53 as seed ortholog is 100%.
Bootstrap support for P0C0Z7 as seed ortholog is 100%.

Group of orthologs #6. Best score 505 bits
Score difference with first non-orthologous sequence - C.cinerea:505 C.trachomatis:505

A8NST1              	100.00%		O84057              	100.00%
Bootstrap support for A8NST1 as seed ortholog is 100%.
Bootstrap support for O84057 as seed ortholog is 100%.

Group of orthologs #7. Best score 503 bits
Score difference with first non-orthologous sequence - C.cinerea:358 C.trachomatis:503

A8NEP7              	100.00%		O84067              	100.00%
Bootstrap support for A8NEP7 as seed ortholog is 100%.
Bootstrap support for O84067 as seed ortholog is 100%.

Group of orthologs #8. Best score 502 bits
Score difference with first non-orthologous sequence - C.cinerea:202 C.trachomatis:502

A8P1W0              	100.00%		O84444              	100.00%
Bootstrap support for A8P1W0 as seed ortholog is 99%.
Bootstrap support for O84444 as seed ortholog is 100%.

Group of orthologs #9. Best score 502 bits
Score difference with first non-orthologous sequence - C.cinerea:133 C.trachomatis:502

A8P307              	100.00%		O84348              	100.00%
Bootstrap support for A8P307 as seed ortholog is 50%.
Alternative seed ortholog is A8NIR1 (133 bits away from this cluster)
Bootstrap support for O84348 as seed ortholog is 100%.

Group of orthologs #10. Best score 496 bits
Score difference with first non-orthologous sequence - C.cinerea:496 C.trachomatis:496

A8PHA8              	100.00%		O84585              	100.00%
Bootstrap support for A8PHA8 as seed ortholog is 100%.
Bootstrap support for O84585 as seed ortholog is 100%.

Group of orthologs #11. Best score 488 bits
Score difference with first non-orthologous sequence - C.cinerea:354 C.trachomatis:488

A8NWU5              	100.00%		O84304              	100.00%
Bootstrap support for A8NWU5 as seed ortholog is 100%.
Bootstrap support for O84304 as seed ortholog is 100%.

Group of orthologs #12. Best score 484 bits
Score difference with first non-orthologous sequence - C.cinerea:484 C.trachomatis:484

A8NGZ8              	100.00%		O84755              	100.00%
Bootstrap support for A8NGZ8 as seed ortholog is 100%.
Bootstrap support for O84755 as seed ortholog is 100%.

Group of orthologs #13. Best score 481 bits
Score difference with first non-orthologous sequence - C.cinerea:481 C.trachomatis:481

A8N1T4              	100.00%		O84863              	100.00%
Bootstrap support for A8N1T4 as seed ortholog is 100%.
Bootstrap support for O84863 as seed ortholog is 100%.

Group of orthologs #14. Best score 479 bits
Score difference with first non-orthologous sequence - C.cinerea:479 C.trachomatis:479

A8N6S6              	100.00%		O84754              	100.00%
Bootstrap support for A8N6S6 as seed ortholog is 100%.
Bootstrap support for O84754 as seed ortholog is 100%.

Group of orthologs #15. Best score 476 bits
Score difference with first non-orthologous sequence - C.cinerea:476 C.trachomatis:476

A8N212              	100.00%		O84066              	100.00%
Bootstrap support for A8N212 as seed ortholog is 100%.
Bootstrap support for O84066 as seed ortholog is 100%.

Group of orthologs #16. Best score 472 bits
Score difference with first non-orthologous sequence - C.cinerea:319 C.trachomatis:472

A8N1J6              	100.00%		P0CD71              	100.00%
Bootstrap support for A8N1J6 as seed ortholog is 100%.
Bootstrap support for P0CD71 as seed ortholog is 100%.

Group of orthologs #17. Best score 455 bits
Score difference with first non-orthologous sequence - C.cinerea:455 C.trachomatis:455

A8NR17              	100.00%		O84834              	100.00%
Bootstrap support for A8NR17 as seed ortholog is 100%.
Bootstrap support for O84834 as seed ortholog is 100%.

Group of orthologs #18. Best score 451 bits
Score difference with first non-orthologous sequence - C.cinerea:451 C.trachomatis:451

A8PBP1              	100.00%		P0CD73              	100.00%
Bootstrap support for A8PBP1 as seed ortholog is 100%.
Bootstrap support for P0CD73 as seed ortholog is 100%.

Group of orthologs #19. Best score 441 bits
Score difference with first non-orthologous sequence - C.cinerea:40 C.trachomatis:441

A8N2K1              	100.00%		O84848              	100.00%
Bootstrap support for A8N2K1 as seed ortholog is 82%.
Bootstrap support for O84848 as seed ortholog is 100%.

Group of orthologs #20. Best score 421 bits
Score difference with first non-orthologous sequence - C.cinerea:421 C.trachomatis:421

A8NEP3              	100.00%		O84172              	100.00%
Bootstrap support for A8NEP3 as seed ortholog is 100%.
Bootstrap support for O84172 as seed ortholog is 100%.

Group of orthologs #21. Best score 406 bits
Score difference with first non-orthologous sequence - C.cinerea:406 C.trachomatis:406

A8P5F3              	100.00%		Q59321              	100.00%
Bootstrap support for A8P5F3 as seed ortholog is 100%.
Bootstrap support for Q59321 as seed ortholog is 100%.

Group of orthologs #22. Best score 367 bits
Score difference with first non-orthologous sequence - C.cinerea:240 C.trachomatis:367

A8NGB6              	100.00%		O84098              	100.00%
Bootstrap support for A8NGB6 as seed ortholog is 100%.
Bootstrap support for O84098 as seed ortholog is 100%.

Group of orthologs #23. Best score 365 bits
Score difference with first non-orthologous sequence - C.cinerea:365 C.trachomatis:365

A8NJ68              	100.00%		P0CE13              	100.00%
A8NJ70              	33.66%		
Bootstrap support for A8NJ68 as seed ortholog is 100%.
Bootstrap support for P0CE13 as seed ortholog is 100%.

Group of orthologs #24. Best score 345 bits
Score difference with first non-orthologous sequence - C.cinerea:257 C.trachomatis:345

A8NG68              	100.00%		O84310              	100.00%
Bootstrap support for A8NG68 as seed ortholog is 100%.
Bootstrap support for O84310 as seed ortholog is 100%.

Group of orthologs #25. Best score 344 bits
Score difference with first non-orthologous sequence - C.cinerea:344 C.trachomatis:344

A8N3J7              	100.00%		O84591              	100.00%
Bootstrap support for A8N3J7 as seed ortholog is 100%.
Bootstrap support for O84591 as seed ortholog is 100%.

Group of orthologs #26. Best score 332 bits
Score difference with first non-orthologous sequence - C.cinerea:332 C.trachomatis:332

A8NSQ2              	100.00%		O84101              	100.00%
Bootstrap support for A8NSQ2 as seed ortholog is 100%.
Bootstrap support for O84101 as seed ortholog is 100%.

Group of orthologs #27. Best score 331 bits
Score difference with first non-orthologous sequence - C.cinerea:239 C.trachomatis:331

A8N7Q5              	100.00%		O84786              	100.00%
Bootstrap support for A8N7Q5 as seed ortholog is 100%.
Bootstrap support for O84786 as seed ortholog is 100%.

Group of orthologs #28. Best score 324 bits
Score difference with first non-orthologous sequence - C.cinerea:149 C.trachomatis:324

A8NNP4              	100.00%		O84561              	100.00%
Bootstrap support for A8NNP4 as seed ortholog is 99%.
Bootstrap support for O84561 as seed ortholog is 100%.

Group of orthologs #29. Best score 320 bits
Score difference with first non-orthologous sequence - C.cinerea:320 C.trachomatis:320

A8NG84              	100.00%		P0CD78              	100.00%
Bootstrap support for A8NG84 as seed ortholog is 100%.
Bootstrap support for P0CD78 as seed ortholog is 100%.

Group of orthologs #30. Best score 320 bits
Score difference with first non-orthologous sequence - C.cinerea:182 C.trachomatis:320

A8NWQ1              	100.00%		O84546              	100.00%
Bootstrap support for A8NWQ1 as seed ortholog is 99%.
Bootstrap support for O84546 as seed ortholog is 100%.

Group of orthologs #31. Best score 317 bits
Score difference with first non-orthologous sequence - C.cinerea:149 C.trachomatis:317

A8NXQ0              	100.00%		O84248              	100.00%
Bootstrap support for A8NXQ0 as seed ortholog is 99%.
Bootstrap support for O84248 as seed ortholog is 100%.

Group of orthologs #32. Best score 312 bits
Score difference with first non-orthologous sequence - C.cinerea:312 C.trachomatis:312

A8N2R8              	100.00%		P0CE09              	100.00%
A8NJT3              	16.24%		
Bootstrap support for A8N2R8 as seed ortholog is 100%.
Bootstrap support for P0CE09 as seed ortholog is 100%.

Group of orthologs #33. Best score 309 bits
Score difference with first non-orthologous sequence - C.cinerea:309 C.trachomatis:309

A8N151              	100.00%		O84829              	100.00%
Bootstrap support for A8N151 as seed ortholog is 100%.
Bootstrap support for O84829 as seed ortholog is 100%.

Group of orthologs #34. Best score 288 bits
Score difference with first non-orthologous sequence - C.cinerea:288 C.trachomatis:288

A8PGH2              	100.00%		O84316              	100.00%
A8N128              	17.32%		
D6RMH4              	9.69%		
Bootstrap support for A8PGH2 as seed ortholog is 100%.
Bootstrap support for O84316 as seed ortholog is 100%.

Group of orthologs #35. Best score 285 bits
Score difference with first non-orthologous sequence - C.cinerea:285 C.trachomatis:285

A8NXI9              	100.00%		O84188              	100.00%
Bootstrap support for A8NXI9 as seed ortholog is 100%.
Bootstrap support for O84188 as seed ortholog is 100%.

Group of orthologs #36. Best score 283 bits
Score difference with first non-orthologous sequence - C.cinerea:283 C.trachomatis:283

D6RM91              	100.00%		O84614              	100.00%
Bootstrap support for D6RM91 as seed ortholog is 100%.
Bootstrap support for O84614 as seed ortholog is 100%.

Group of orthologs #37. Best score 282 bits
Score difference with first non-orthologous sequence - C.cinerea:183 C.trachomatis:282

A8N8S3              	100.00%		O84006              	100.00%
Bootstrap support for A8N8S3 as seed ortholog is 100%.
Bootstrap support for O84006 as seed ortholog is 100%.

Group of orthologs #38. Best score 281 bits
Score difference with first non-orthologous sequence - C.cinerea:177 C.trachomatis:281

A8NTI4              	100.00%		O84035              	100.00%
Bootstrap support for A8NTI4 as seed ortholog is 99%.
Bootstrap support for O84035 as seed ortholog is 100%.

Group of orthologs #39. Best score 280 bits
Score difference with first non-orthologous sequence - C.cinerea:280 C.trachomatis:280

A8N162              	100.00%		P0CE21              	100.00%
Bootstrap support for A8N162 as seed ortholog is 100%.
Bootstrap support for P0CE21 as seed ortholog is 100%.

Group of orthologs #40. Best score 279 bits
Score difference with first non-orthologous sequence - C.cinerea:6 C.trachomatis:279

A8NC53              	100.00%		O84797              	100.00%
Bootstrap support for A8NC53 as seed ortholog is 53%.
Alternative seed ortholog is A8N209 (6 bits away from this cluster)
Bootstrap support for O84797 as seed ortholog is 100%.

Group of orthologs #41. Best score 272 bits
Score difference with first non-orthologous sequence - C.cinerea:272 C.trachomatis:114

A8NMZ0              	100.00%		O84026              	100.00%
Bootstrap support for A8NMZ0 as seed ortholog is 100%.
Bootstrap support for O84026 as seed ortholog is 99%.

Group of orthologs #42. Best score 272 bits
Score difference with first non-orthologous sequence - C.cinerea:272 C.trachomatis:272

A8P8Q9              	100.00%		P0CD72              	100.00%
Bootstrap support for A8P8Q9 as seed ortholog is 100%.
Bootstrap support for P0CD72 as seed ortholog is 100%.

Group of orthologs #43. Best score 268 bits
Score difference with first non-orthologous sequence - C.cinerea:268 C.trachomatis:97

A8NC02              	100.00%		O84058              	100.00%
Bootstrap support for A8NC02 as seed ortholog is 100%.
Bootstrap support for O84058 as seed ortholog is 99%.

Group of orthologs #44. Best score 263 bits
Score difference with first non-orthologous sequence - C.cinerea:197 C.trachomatis:263

A8NS64              	100.00%		O84309              	100.00%
Bootstrap support for A8NS64 as seed ortholog is 100%.
Bootstrap support for O84309 as seed ortholog is 100%.

Group of orthologs #45. Best score 260 bits
Score difference with first non-orthologous sequence - C.cinerea:260 C.trachomatis:260

A8P0J8              	100.00%		O84439              	100.00%
Bootstrap support for A8P0J8 as seed ortholog is 100%.
Bootstrap support for O84439 as seed ortholog is 100%.

Group of orthologs #46. Best score 258 bits
Score difference with first non-orthologous sequence - C.cinerea:186 C.trachomatis:95

A8N1J7              	100.00%		O84249              	100.00%
Bootstrap support for A8N1J7 as seed ortholog is 100%.
Bootstrap support for O84249 as seed ortholog is 98%.

Group of orthologs #47. Best score 256 bits
Score difference with first non-orthologous sequence - C.cinerea:256 C.trachomatis:256

A8N0K4              	100.00%		O84828              	100.00%
Bootstrap support for A8N0K4 as seed ortholog is 100%.
Bootstrap support for O84828 as seed ortholog is 100%.

Group of orthologs #48. Best score 253 bits
Score difference with first non-orthologous sequence - C.cinerea:253 C.trachomatis:253

A8NWH9              	100.00%		O84711              	100.00%
Bootstrap support for A8NWH9 as seed ortholog is 100%.
Bootstrap support for O84711 as seed ortholog is 100%.

Group of orthologs #49. Best score 249 bits
Score difference with first non-orthologous sequence - C.cinerea:249 C.trachomatis:249

A8N225              	100.00%		O84373              	100.00%
Bootstrap support for A8N225 as seed ortholog is 100%.
Bootstrap support for O84373 as seed ortholog is 100%.

Group of orthologs #50. Best score 249 bits
Score difference with first non-orthologous sequence - C.cinerea:82 C.trachomatis:249

A8NNV3              	100.00%		O84315              	100.00%
Bootstrap support for A8NNV3 as seed ortholog is 98%.
Bootstrap support for O84315 as seed ortholog is 100%.

Group of orthologs #51. Best score 248 bits
Score difference with first non-orthologous sequence - C.cinerea:248 C.trachomatis:248

A8N0A9              	100.00%		O84451              	100.00%
Bootstrap support for A8N0A9 as seed ortholog is 100%.
Bootstrap support for O84451 as seed ortholog is 100%.

Group of orthologs #52. Best score 242 bits
Score difference with first non-orthologous sequence - C.cinerea:62 C.trachomatis:242

A8N0I4              	100.00%		O84345              	100.00%
Bootstrap support for A8N0I4 as seed ortholog is 96%.
Bootstrap support for O84345 as seed ortholog is 100%.

Group of orthologs #53. Best score 240 bits
Score difference with first non-orthologous sequence - C.cinerea:240 C.trachomatis:240

A8P317              	100.00%		O84698              	100.00%
A8N5Q4              	84.84%		
A8NNQ5              	61.83%		
Bootstrap support for A8P317 as seed ortholog is 100%.
Bootstrap support for O84698 as seed ortholog is 100%.

Group of orthologs #54. Best score 239 bits
Score difference with first non-orthologous sequence - C.cinerea:239 C.trachomatis:239

A8N799              	100.00%		O84787              	100.00%
D6RL79              	18.99%		
Bootstrap support for A8N799 as seed ortholog is 100%.
Bootstrap support for O84787 as seed ortholog is 100%.

Group of orthologs #55. Best score 239 bits
Score difference with first non-orthologous sequence - C.cinerea:239 C.trachomatis:239

A8P5J7              	100.00%		O84126              	100.00%
A8N9T7              	7.51%		
Bootstrap support for A8P5J7 as seed ortholog is 100%.
Bootstrap support for O84126 as seed ortholog is 100%.

Group of orthologs #56. Best score 232 bits
Score difference with first non-orthologous sequence - C.cinerea:232 C.trachomatis:232

A8N6Y4              	100.00%		O84065              	100.00%
Bootstrap support for A8N6Y4 as seed ortholog is 100%.
Bootstrap support for O84065 as seed ortholog is 100%.

Group of orthologs #57. Best score 232 bits
Score difference with first non-orthologous sequence - C.cinerea:143 C.trachomatis:232

A8PA35              	100.00%		O84596              	100.00%
Bootstrap support for A8PA35 as seed ortholog is 99%.
Bootstrap support for O84596 as seed ortholog is 100%.

Group of orthologs #58. Best score 230 bits
Score difference with first non-orthologous sequence - C.cinerea:230 C.trachomatis:230

A8N1I2              	100.00%		O84642              	100.00%
A8NFP4              	32.17%		
Bootstrap support for A8N1I2 as seed ortholog is 100%.
Bootstrap support for O84642 as seed ortholog is 100%.

Group of orthologs #59. Best score 227 bits
Score difference with first non-orthologous sequence - C.cinerea:227 C.trachomatis:227

A8NBR4              	100.00%		O84823              	100.00%
Bootstrap support for A8NBR4 as seed ortholog is 100%.
Bootstrap support for O84823 as seed ortholog is 100%.

Group of orthologs #60. Best score 227 bits
Score difference with first non-orthologous sequence - C.cinerea:184 C.trachomatis:227

A8NT34              	100.00%		O84094              	100.00%
Bootstrap support for A8NT34 as seed ortholog is 100%.
Bootstrap support for O84094 as seed ortholog is 100%.

Group of orthologs #61. Best score 225 bits
Score difference with first non-orthologous sequence - C.cinerea:225 C.trachomatis:225

A8N1T1              	100.00%		O84562              	100.00%
Bootstrap support for A8N1T1 as seed ortholog is 100%.
Bootstrap support for O84562 as seed ortholog is 100%.

Group of orthologs #62. Best score 216 bits
Score difference with first non-orthologous sequence - C.cinerea:216 C.trachomatis:216

A8N3X1              	100.00%		O84049              	100.00%
Bootstrap support for A8N3X1 as seed ortholog is 100%.
Bootstrap support for O84049 as seed ortholog is 100%.

Group of orthologs #63. Best score 214 bits
Score difference with first non-orthologous sequence - C.cinerea:47 C.trachomatis:214

A8N229              	100.00%		O84352              	100.00%
A8P736              	11.92%		
Bootstrap support for A8N229 as seed ortholog is 74%.
Alternative seed ortholog is D6RQA8 (47 bits away from this cluster)
Bootstrap support for O84352 as seed ortholog is 100%.

Group of orthologs #64. Best score 213 bits
Score difference with first non-orthologous sequence - C.cinerea:146 C.trachomatis:213

A8NG63              	100.00%		O84297              	100.00%
Bootstrap support for A8NG63 as seed ortholog is 99%.
Bootstrap support for O84297 as seed ortholog is 100%.

Group of orthologs #65. Best score 212 bits
Score difference with first non-orthologous sequence - C.cinerea:212 C.trachomatis:212

A8NZV3              	100.00%		O84296              	100.00%
A8NCK1              	36.80%		
Bootstrap support for A8NZV3 as seed ortholog is 100%.
Bootstrap support for O84296 as seed ortholog is 100%.

Group of orthologs #66. Best score 207 bits
Score difference with first non-orthologous sequence - C.cinerea:207 C.trachomatis:207

D6RMS8              	100.00%		O84007              	100.00%
Bootstrap support for D6RMS8 as seed ortholog is 100%.
Bootstrap support for O84007 as seed ortholog is 100%.

Group of orthologs #67. Best score 205 bits
Score difference with first non-orthologous sequence - C.cinerea:69 C.trachomatis:205

A8N8V5              	100.00%		O84732              	100.00%
Bootstrap support for A8N8V5 as seed ortholog is 90%.
Bootstrap support for O84732 as seed ortholog is 100%.

Group of orthologs #68. Best score 205 bits
Score difference with first non-orthologous sequence - C.cinerea:205 C.trachomatis:205

A8NEA9              	100.00%		O84704              	100.00%
Bootstrap support for A8NEA9 as seed ortholog is 100%.
Bootstrap support for O84704 as seed ortholog is 100%.

Group of orthologs #69. Best score 203 bits
Score difference with first non-orthologous sequence - C.cinerea:203 C.trachomatis:203

A8N640              	100.00%		O84638              	100.00%
Bootstrap support for A8N640 as seed ortholog is 100%.
Bootstrap support for O84638 as seed ortholog is 100%.

Group of orthologs #70. Best score 202 bits
Score difference with first non-orthologous sequence - C.cinerea:9 C.trachomatis:202

A8NZQ1              	100.00%		O84734              	100.00%
Bootstrap support for A8NZQ1 as seed ortholog is 60%.
Alternative seed ortholog is A8N2E9 (9 bits away from this cluster)
Bootstrap support for O84734 as seed ortholog is 100%.

Group of orthologs #71. Best score 200 bits
Score difference with first non-orthologous sequence - C.cinerea:200 C.trachomatis:200

A8NDW7              	100.00%		O84289              	100.00%
Bootstrap support for A8NDW7 as seed ortholog is 100%.
Bootstrap support for O84289 as seed ortholog is 100%.

Group of orthologs #72. Best score 199 bits
Score difference with first non-orthologous sequence - C.cinerea:199 C.trachomatis:126

A8NFI7              	100.00%		O84859              	100.00%
D6RMT5              	9.97%		
Bootstrap support for A8NFI7 as seed ortholog is 100%.
Bootstrap support for O84859 as seed ortholog is 99%.

Group of orthologs #73. Best score 197 bits
Score difference with first non-orthologous sequence - C.cinerea:197 C.trachomatis:197

A8NZR9              	100.00%		O84423              	100.00%
Bootstrap support for A8NZR9 as seed ortholog is 100%.
Bootstrap support for O84423 as seed ortholog is 100%.

Group of orthologs #74. Best score 192 bits
Score difference with first non-orthologous sequence - C.cinerea:192 C.trachomatis:192

Q12574              	100.00%		O84332              	100.00%
Bootstrap support for Q12574 as seed ortholog is 100%.
Bootstrap support for O84332 as seed ortholog is 100%.

Group of orthologs #75. Best score 188 bits
Score difference with first non-orthologous sequence - C.cinerea:188 C.trachomatis:47

A8N0U4              	100.00%		O84712              	100.00%
Bootstrap support for A8N0U4 as seed ortholog is 100%.
Bootstrap support for O84712 as seed ortholog is 96%.

Group of orthologs #76. Best score 188 bits
Score difference with first non-orthologous sequence - C.cinerea:188 C.trachomatis:188

A8NRC3              	100.00%		O84460              	100.00%
Bootstrap support for A8NRC3 as seed ortholog is 100%.
Bootstrap support for O84460 as seed ortholog is 100%.

Group of orthologs #77. Best score 186 bits
Score difference with first non-orthologous sequence - C.cinerea:186 C.trachomatis:186

A8NF90              	100.00%		O84028              	100.00%
Bootstrap support for A8NF90 as seed ortholog is 100%.
Bootstrap support for O84028 as seed ortholog is 100%.

Group of orthologs #78. Best score 182 bits
Score difference with first non-orthologous sequence - C.cinerea:182 C.trachomatis:182

A8N6Y2              	100.00%		O84196              	100.00%
Bootstrap support for A8N6Y2 as seed ortholog is 100%.
Bootstrap support for O84196 as seed ortholog is 100%.

Group of orthologs #79. Best score 182 bits
Score difference with first non-orthologous sequence - C.cinerea:182 C.trachomatis:182

A8NYJ9              	100.00%		O84874              	100.00%
Bootstrap support for A8NYJ9 as seed ortholog is 100%.
Bootstrap support for O84874 as seed ortholog is 100%.

Group of orthologs #80. Best score 181 bits
Score difference with first non-orthologous sequence - C.cinerea:181 C.trachomatis:181

A8N177              	100.00%		O84613              	100.00%
Bootstrap support for A8N177 as seed ortholog is 100%.
Bootstrap support for O84613 as seed ortholog is 100%.

Group of orthologs #81. Best score 180 bits
Score difference with first non-orthologous sequence - C.cinerea:59 C.trachomatis:180

A8P401              	100.00%		O84266              	100.00%
D6RL84              	21.54%		
Bootstrap support for A8P401 as seed ortholog is 91%.
Bootstrap support for O84266 as seed ortholog is 100%.

Group of orthologs #82. Best score 175 bits
Score difference with first non-orthologous sequence - C.cinerea:34 C.trachomatis:175

A8NEG5              	100.00%		O84676              	100.00%
                    	       		O84722              	10.91%
Bootstrap support for A8NEG5 as seed ortholog is 82%.
Bootstrap support for O84676 as seed ortholog is 100%.

Group of orthologs #83. Best score 174 bits
Score difference with first non-orthologous sequence - C.cinerea:174 C.trachomatis:174

A8NEK1              	100.00%		O84812              	100.00%
Bootstrap support for A8NEK1 as seed ortholog is 100%.
Bootstrap support for O84812 as seed ortholog is 100%.

Group of orthologs #84. Best score 173 bits
Score difference with first non-orthologous sequence - C.cinerea:88 C.trachomatis:173

A8N3P9              	100.00%		O84530              	100.00%
Bootstrap support for A8N3P9 as seed ortholog is 98%.
Bootstrap support for O84530 as seed ortholog is 100%.

Group of orthologs #85. Best score 170 bits
Score difference with first non-orthologous sequence - C.cinerea:80 C.trachomatis:170

A8P325              	100.00%		O84247              	100.00%
Bootstrap support for A8P325 as seed ortholog is 99%.
Bootstrap support for O84247 as seed ortholog is 100%.

Group of orthologs #86. Best score 168 bits
Score difference with first non-orthologous sequence - C.cinerea:168 C.trachomatis:168

D6RMG9              	100.00%		O84402              	100.00%
A8NXM9              	8.37%		
Bootstrap support for D6RMG9 as seed ortholog is 100%.
Bootstrap support for O84402 as seed ortholog is 100%.

Group of orthologs #87. Best score 168 bits
Score difference with first non-orthologous sequence - C.cinerea:168 C.trachomatis:168

A8N2N6              	100.00%		O84719              	100.00%
Bootstrap support for A8N2N6 as seed ortholog is 100%.
Bootstrap support for O84719 as seed ortholog is 100%.

Group of orthologs #88. Best score 159 bits
Score difference with first non-orthologous sequence - C.cinerea:159 C.trachomatis:159

A8N2Z3              	100.00%		O84720              	100.00%
Bootstrap support for A8N2Z3 as seed ortholog is 100%.
Bootstrap support for O84720 as seed ortholog is 100%.

Group of orthologs #89. Best score 159 bits
Score difference with first non-orthologous sequence - C.cinerea:159 C.trachomatis:159

A8P6J3              	100.00%		O84368              	100.00%
Bootstrap support for A8P6J3 as seed ortholog is 100%.
Bootstrap support for O84368 as seed ortholog is 100%.

Group of orthologs #90. Best score 157 bits
Score difference with first non-orthologous sequence - C.cinerea:79 C.trachomatis:157

A8N6L1              	100.00%		O84200              	100.00%
Bootstrap support for A8N6L1 as seed ortholog is 97%.
Bootstrap support for O84200 as seed ortholog is 100%.

Group of orthologs #91. Best score 153 bits
Score difference with first non-orthologous sequence - C.cinerea:153 C.trachomatis:153

A8NYC3              	100.00%		O84752              	100.00%
Bootstrap support for A8NYC3 as seed ortholog is 100%.
Bootstrap support for O84752 as seed ortholog is 100%.

Group of orthologs #92. Best score 151 bits
Score difference with first non-orthologous sequence - C.cinerea:58 C.trachomatis:151

A8P2C5              	100.00%		O84608              	100.00%
Bootstrap support for A8P2C5 as seed ortholog is 97%.
Bootstrap support for O84608 as seed ortholog is 100%.

Group of orthologs #93. Best score 145 bits
Score difference with first non-orthologous sequence - C.cinerea:145 C.trachomatis:37

A8NEJ4              	100.00%		O84260              	100.00%
Bootstrap support for A8NEJ4 as seed ortholog is 100%.
Bootstrap support for O84260 as seed ortholog is 80%.

Group of orthologs #94. Best score 145 bits
Score difference with first non-orthologous sequence - C.cinerea:145 C.trachomatis:145

D6RKI9              	100.00%		O84630              	100.00%
Bootstrap support for D6RKI9 as seed ortholog is 100%.
Bootstrap support for O84630 as seed ortholog is 100%.

Group of orthologs #95. Best score 141 bits
Score difference with first non-orthologous sequence - C.cinerea:141 C.trachomatis:141

A8N5W9              	100.00%		O84492              	100.00%
Bootstrap support for A8N5W9 as seed ortholog is 100%.
Bootstrap support for O84492 as seed ortholog is 100%.

Group of orthologs #96. Best score 141 bits
Score difference with first non-orthologous sequence - C.cinerea:90 C.trachomatis:141

A8NQT7              	100.00%		P66370              	100.00%
Bootstrap support for A8NQT7 as seed ortholog is 99%.
Bootstrap support for P66370 as seed ortholog is 100%.

Group of orthologs #97. Best score 137 bits
Score difference with first non-orthologous sequence - C.cinerea:137 C.trachomatis:137

A8P9W8              	100.00%		O84589              	100.00%
Bootstrap support for A8P9W8 as seed ortholog is 100%.
Bootstrap support for O84589 as seed ortholog is 100%.

Group of orthologs #98. Best score 136 bits
Score difference with first non-orthologous sequence - C.cinerea:136 C.trachomatis:136

A8NVJ8              	100.00%		O84456              	100.00%
A8NVR6              	97.47%		
Bootstrap support for A8NVJ8 as seed ortholog is 100%.
Bootstrap support for O84456 as seed ortholog is 100%.

Group of orthologs #99. Best score 133 bits
Score difference with first non-orthologous sequence - C.cinerea:3 C.trachomatis:133

A8NWF2              	100.00%		P38004              	100.00%
A8N5Y6              	6.81%		
A8N7Y6              	5.87%		
Bootstrap support for A8NWF2 as seed ortholog is 50%.
Alternative seed ortholog is A8N0P4 (3 bits away from this cluster)
Bootstrap support for P38004 as seed ortholog is 100%.

Group of orthologs #100. Best score 133 bits
Score difference with first non-orthologous sequence - C.cinerea:133 C.trachomatis:133

A8N040              	100.00%		P55137              	100.00%
Bootstrap support for A8N040 as seed ortholog is 100%.
Bootstrap support for P55137 as seed ortholog is 100%.

Group of orthologs #101. Best score 132 bits
Score difference with first non-orthologous sequence - C.cinerea:132 C.trachomatis:132

A8NX45              	100.00%		O84835              	100.00%
A8NX46              	59.43%		
Bootstrap support for A8NX45 as seed ortholog is 100%.
Bootstrap support for O84835 as seed ortholog is 100%.

Group of orthologs #102. Best score 130 bits
Score difference with first non-orthologous sequence - C.cinerea:130 C.trachomatis:130

A8N160              	100.00%		O84123              	100.00%
Bootstrap support for A8N160 as seed ortholog is 100%.
Bootstrap support for O84123 as seed ortholog is 100%.

Group of orthologs #103. Best score 126 bits
Score difference with first non-orthologous sequence - C.cinerea:126 C.trachomatis:126

A8N9M3              	100.00%		O84033              	100.00%
Bootstrap support for A8N9M3 as seed ortholog is 100%.
Bootstrap support for O84033 as seed ortholog is 100%.

Group of orthologs #104. Best score 125 bits
Score difference with first non-orthologous sequence - C.cinerea:34 C.trachomatis:125

A8PCF1              	100.00%		O84478              	100.00%
Bootstrap support for A8PCF1 as seed ortholog is 86%.
Bootstrap support for O84478 as seed ortholog is 100%.

Group of orthologs #105. Best score 124 bits
Score difference with first non-orthologous sequence - C.cinerea:124 C.trachomatis:124

D6RQE9              	100.00%		O84109              	100.00%
Bootstrap support for D6RQE9 as seed ortholog is 100%.
Bootstrap support for O84109 as seed ortholog is 100%.

Group of orthologs #106. Best score 120 bits
Score difference with first non-orthologous sequence - C.cinerea:120 C.trachomatis:120

A8NH04              	100.00%		O84463              	100.00%
Bootstrap support for A8NH04 as seed ortholog is 100%.
Bootstrap support for O84463 as seed ortholog is 100%.

Group of orthologs #107. Best score 117 bits
Score difference with first non-orthologous sequence - C.cinerea:34 C.trachomatis:117

A8PAA1              	100.00%		O84130              	100.00%
A8NF79              	10.35%		
Bootstrap support for A8PAA1 as seed ortholog is 87%.
Bootstrap support for O84130 as seed ortholog is 100%.

Group of orthologs #108. Best score 116 bits
Score difference with first non-orthologous sequence - C.cinerea:116 C.trachomatis:116

A8NY41              	100.00%		O84321              	100.00%
Bootstrap support for A8NY41 as seed ortholog is 100%.
Bootstrap support for O84321 as seed ortholog is 100%.

Group of orthologs #109. Best score 116 bits
Score difference with first non-orthologous sequence - C.cinerea:30 C.trachomatis:116

A8NXV8              	100.00%		O84843              	100.00%
Bootstrap support for A8NXV8 as seed ortholog is 73%.
Alternative seed ortholog is A8NFE3 (30 bits away from this cluster)
Bootstrap support for O84843 as seed ortholog is 100%.

Group of orthologs #110. Best score 110 bits
Score difference with first non-orthologous sequence - C.cinerea:110 C.trachomatis:110

A8NVG2              	100.00%		O84782              	100.00%
Bootstrap support for A8NVG2 as seed ortholog is 100%.
Bootstrap support for O84782 as seed ortholog is 100%.

Group of orthologs #111. Best score 109 bits
Score difference with first non-orthologous sequence - C.cinerea:109 C.trachomatis:109

A8NGZ5              	100.00%		O84508              	100.00%
Bootstrap support for A8NGZ5 as seed ortholog is 100%.
Bootstrap support for O84508 as seed ortholog is 100%.

Group of orthologs #112. Best score 108 bits
Score difference with first non-orthologous sequence - C.cinerea:108 C.trachomatis:108

A8NF51              	100.00%		O84533              	100.00%
Bootstrap support for A8NF51 as seed ortholog is 100%.
Bootstrap support for O84533 as seed ortholog is 100%.

Group of orthologs #113. Best score 107 bits
Score difference with first non-orthologous sequence - C.cinerea:107 C.trachomatis:107

A8NH03              	100.00%		O84864              	100.00%
Bootstrap support for A8NH03 as seed ortholog is 100%.
Bootstrap support for O84864 as seed ortholog is 100%.

Group of orthologs #114. Best score 107 bits
Score difference with first non-orthologous sequence - C.cinerea:63 C.trachomatis:107

A8P6K4              	100.00%		O84127              	100.00%
Bootstrap support for A8P6K4 as seed ortholog is 99%.
Bootstrap support for O84127 as seed ortholog is 100%.

Group of orthologs #115. Best score 104 bits
Score difference with first non-orthologous sequence - C.cinerea:104 C.trachomatis:104

A8N0A2              	100.00%		P0CD79              	100.00%
Bootstrap support for A8N0A2 as seed ortholog is 100%.
Bootstrap support for P0CD79 as seed ortholog is 100%.

Group of orthologs #116. Best score 103 bits
Score difference with first non-orthologous sequence - C.cinerea:58 C.trachomatis:103

A8NHH0              	100.00%		O84687              	100.00%
Bootstrap support for A8NHH0 as seed ortholog is 93%.
Bootstrap support for O84687 as seed ortholog is 100%.

Group of orthologs #117. Best score 98 bits
Score difference with first non-orthologous sequence - C.cinerea:98 C.trachomatis:98

A8N1M2              	100.00%		O84831              	100.00%
Bootstrap support for A8N1M2 as seed ortholog is 100%.
Bootstrap support for O84831 as seed ortholog is 100%.

Group of orthologs #118. Best score 98 bits
Score difference with first non-orthologous sequence - C.cinerea:98 C.trachomatis:98

A8NFA9              	100.00%		O84096              	100.00%
Bootstrap support for A8NFA9 as seed ortholog is 100%.
Bootstrap support for O84096 as seed ortholog is 100%.

Group of orthologs #119. Best score 97 bits
Score difference with first non-orthologous sequence - C.cinerea:31 C.trachomatis:97

A8P0Q3              	100.00%		P0CD81              	100.00%
Bootstrap support for A8P0Q3 as seed ortholog is 91%.
Bootstrap support for P0CD81 as seed ortholog is 100%.

Group of orthologs #120. Best score 96 bits
Score difference with first non-orthologous sequence - C.cinerea:96 C.trachomatis:96

A8P545              	100.00%		O84595              	100.00%
Bootstrap support for A8P545 as seed ortholog is 100%.
Bootstrap support for O84595 as seed ortholog is 100%.

Group of orthologs #121. Best score 95 bits
Score difference with first non-orthologous sequence - C.cinerea:95 C.trachomatis:95

D6RN59              	100.00%		O84619              	100.00%
Bootstrap support for D6RN59 as seed ortholog is 100%.
Bootstrap support for O84619 as seed ortholog is 100%.

Group of orthologs #122. Best score 93 bits
Score difference with first non-orthologous sequence - C.cinerea:93 C.trachomatis:93

A8PCA4              	100.00%		P0CD83              	100.00%
Bootstrap support for A8PCA4 as seed ortholog is 100%.
Bootstrap support for P0CD83 as seed ortholog is 100%.

Group of orthologs #123. Best score 93 bits
Score difference with first non-orthologous sequence - C.cinerea:93 C.trachomatis:93

D6RJN9              	100.00%		O84391              	100.00%
Bootstrap support for D6RJN9 as seed ortholog is 100%.
Bootstrap support for O84391 as seed ortholog is 100%.

Group of orthologs #124. Best score 93 bits
Score difference with first non-orthologous sequence - C.cinerea:93 C.trachomatis:93

D6RMN8              	100.00%		O84851              	100.00%
Bootstrap support for D6RMN8 as seed ortholog is 100%.
Bootstrap support for O84851 as seed ortholog is 100%.

Group of orthologs #125. Best score 91 bits
Score difference with first non-orthologous sequence - C.cinerea:91 C.trachomatis:91

A8NG66              	100.00%		O84771              	100.00%
Bootstrap support for A8NG66 as seed ortholog is 100%.
Bootstrap support for O84771 as seed ortholog is 100%.

Group of orthologs #126. Best score 91 bits
Score difference with first non-orthologous sequence - C.cinerea:32 C.trachomatis:91

A8NZ66              	100.00%		O84299              	100.00%
Bootstrap support for A8NZ66 as seed ortholog is 91%.
Bootstrap support for O84299 as seed ortholog is 100%.

Group of orthologs #127. Best score 90 bits
Score difference with first non-orthologous sequence - C.cinerea:90 C.trachomatis:90

D6RJR3              	100.00%		O84779              	100.00%
Bootstrap support for D6RJR3 as seed ortholog is 100%.
Bootstrap support for O84779 as seed ortholog is 100%.

Group of orthologs #128. Best score 89 bits
Score difference with first non-orthologous sequence - C.cinerea:89 C.trachomatis:89

A8NQV2              	100.00%		O84435              	100.00%
Bootstrap support for A8NQV2 as seed ortholog is 100%.
Bootstrap support for O84435 as seed ortholog is 100%.

Group of orthologs #129. Best score 88 bits
Score difference with first non-orthologous sequence - C.cinerea:88 C.trachomatis:88

A8NMB3              	100.00%		O84215              	100.00%
Bootstrap support for A8NMB3 as seed ortholog is 100%.
Bootstrap support for O84215 as seed ortholog is 100%.

Group of orthologs #130. Best score 88 bits
Score difference with first non-orthologous sequence - C.cinerea:88 C.trachomatis:88

A8NRS4              	100.00%		P0CE01              	100.00%
Bootstrap support for A8NRS4 as seed ortholog is 100%.
Bootstrap support for P0CE01 as seed ortholog is 100%.

Group of orthologs #131. Best score 83 bits
Score difference with first non-orthologous sequence - C.cinerea:83 C.trachomatis:83

D6RMH7              	100.00%		O84350              	100.00%
A8NGS8              	10.68%		
Bootstrap support for D6RMH7 as seed ortholog is 100%.
Bootstrap support for O84350 as seed ortholog is 100%.

Group of orthologs #132. Best score 83 bits
Score difference with first non-orthologous sequence - C.cinerea:83 C.trachomatis:83

A8N221              	100.00%		O84189              	100.00%
Bootstrap support for A8N221 as seed ortholog is 100%.
Bootstrap support for O84189 as seed ortholog is 100%.

Group of orthologs #133. Best score 82 bits
Score difference with first non-orthologous sequence - C.cinerea:82 C.trachomatis:82

A8NWU6              	100.00%		O84294              	100.00%
Bootstrap support for A8NWU6 as seed ortholog is 100%.
Bootstrap support for O84294 as seed ortholog is 100%.

Group of orthologs #134. Best score 81 bits
Score difference with first non-orthologous sequence - C.cinerea:81 C.trachomatis:81

A8NJ30              	100.00%		O84358              	100.00%
Bootstrap support for A8NJ30 as seed ortholog is 100%.
Bootstrap support for O84358 as seed ortholog is 100%.

Group of orthologs #135. Best score 79 bits
Score difference with first non-orthologous sequence - C.cinerea:79 C.trachomatis:79

A8NEM7              	100.00%		O84737              	100.00%
Bootstrap support for A8NEM7 as seed ortholog is 100%.
Bootstrap support for O84737 as seed ortholog is 100%.

Group of orthologs #136. Best score 79 bits
Score difference with first non-orthologous sequence - C.cinerea:79 C.trachomatis:79

A8NYT3              	100.00%		O84081              	100.00%
Bootstrap support for A8NYT3 as seed ortholog is 100%.
Bootstrap support for O84081 as seed ortholog is 100%.

Group of orthologs #137. Best score 79 bits
Score difference with first non-orthologous sequence - C.cinerea:11 C.trachomatis:79

A8P1H0              	100.00%		O84599              	100.00%
Bootstrap support for A8P1H0 as seed ortholog is 63%.
Alternative seed ortholog is D6RK11 (11 bits away from this cluster)
Bootstrap support for O84599 as seed ortholog is 100%.

Group of orthologs #138. Best score 79 bits
Score difference with first non-orthologous sequence - C.cinerea:79 C.trachomatis:79

D6RP64              	100.00%		O84442              	100.00%
Bootstrap support for D6RP64 as seed ortholog is 100%.
Bootstrap support for O84442 as seed ortholog is 100%.

Group of orthologs #139. Best score 78 bits
Score difference with first non-orthologous sequence - C.cinerea:78 C.trachomatis:78

D6RJX6              	100.00%		O84658              	100.00%
A8N288              	32.27%		
A8N8Y7              	25.78%		
Bootstrap support for D6RJX6 as seed ortholog is 100%.
Bootstrap support for O84658 as seed ortholog is 100%.

Group of orthologs #140. Best score 78 bits
Score difference with first non-orthologous sequence - C.cinerea:78 C.trachomatis:78

A8NBH9              	100.00%		O84535              	100.00%
Bootstrap support for A8NBH9 as seed ortholog is 100%.
Bootstrap support for O84535 as seed ortholog is 100%.

Group of orthologs #141. Best score 78 bits
Score difference with first non-orthologous sequence - C.cinerea:78 C.trachomatis:78

A8NVM4              	100.00%		O84353              	100.00%
Bootstrap support for A8NVM4 as seed ortholog is 100%.
Bootstrap support for O84353 as seed ortholog is 100%.

Group of orthologs #142. Best score 78 bits
Score difference with first non-orthologous sequence - C.cinerea:37 C.trachomatis:78

D6RK71              	100.00%		O84320              	100.00%
Bootstrap support for D6RK71 as seed ortholog is 89%.
Bootstrap support for O84320 as seed ortholog is 100%.

Group of orthologs #143. Best score 76 bits
Score difference with first non-orthologous sequence - C.cinerea:76 C.trachomatis:76

A8NR09              	100.00%		O84750              	100.00%
Bootstrap support for A8NR09 as seed ortholog is 100%.
Bootstrap support for O84750 as seed ortholog is 100%.

Group of orthologs #144. Best score 76 bits
Score difference with first non-orthologous sequence - C.cinerea:76 C.trachomatis:76

A8PCE0              	100.00%		P36431              	100.00%
Bootstrap support for A8PCE0 as seed ortholog is 100%.
Bootstrap support for P36431 as seed ortholog is 100%.

Group of orthologs #145. Best score 75 bits
Score difference with first non-orthologous sequence - C.cinerea:75 C.trachomatis:75

A8NIA9              	100.00%		O84212              	100.00%
A8NVN8              	100.00%		
D6RMU4              	12.96%		
D6RNX6              	8.55%		
Bootstrap support for A8NIA9 as seed ortholog is 100%.
Bootstrap support for A8NVN8 as seed ortholog is 100%.
Bootstrap support for O84212 as seed ortholog is 100%.

Group of orthologs #146. Best score 74 bits
Score difference with first non-orthologous sequence - C.cinerea:74 C.trachomatis:74

A8NJ16              	100.00%		O84108              	100.00%
                    	       		O84665              	7.43%
Bootstrap support for A8NJ16 as seed ortholog is 100%.
Bootstrap support for O84108 as seed ortholog is 100%.

Group of orthologs #147. Best score 73 bits
Score difference with first non-orthologous sequence - C.cinerea:73 C.trachomatis:73

A8PGG8              	100.00%		O84301              	100.00%
Bootstrap support for A8PGG8 as seed ortholog is 100%.
Bootstrap support for O84301 as seed ortholog is 100%.

Group of orthologs #148. Best score 71 bits
Score difference with first non-orthologous sequence - C.cinerea:71 C.trachomatis:71

D6RK39              	100.00%		O84822              	100.00%
Bootstrap support for D6RK39 as seed ortholog is 100%.
Bootstrap support for O84822 as seed ortholog is 100%.

Group of orthologs #149. Best score 70 bits
Score difference with first non-orthologous sequence - C.cinerea:70 C.trachomatis:70

A8N269              	100.00%		O84415              	100.00%
                    	       		O84710              	11.10%
Bootstrap support for A8N269 as seed ortholog is 100%.
Bootstrap support for O84415 as seed ortholog is 100%.

Group of orthologs #150. Best score 70 bits
Score difference with first non-orthologous sequence - C.cinerea:70 C.trachomatis:70

A8NBX6              	100.00%		O84650              	100.00%
A8N483              	14.80%		
Bootstrap support for A8NBX6 as seed ortholog is 100%.
Bootstrap support for O84650 as seed ortholog is 100%.

Group of orthologs #151. Best score 69 bits
Score difference with first non-orthologous sequence - C.cinerea:69 C.trachomatis:69

A8N2F0              	100.00%		O84338              	100.00%
A8N902              	23.92%		
A8NHH3              	17.50%		
Bootstrap support for A8N2F0 as seed ortholog is 100%.
Bootstrap support for O84338 as seed ortholog is 100%.

Group of orthologs #152. Best score 67 bits
Score difference with first non-orthologous sequence - C.cinerea:67 C.trachomatis:67

A8N5Y4              	100.00%		P26623              	100.00%
Bootstrap support for A8N5Y4 as seed ortholog is 100%.
Bootstrap support for P26623 as seed ortholog is 100%.

Group of orthologs #153. Best score 67 bits
Score difference with first non-orthologous sequence - C.cinerea:67 C.trachomatis:67

A8NG65              	100.00%		P0CD82              	100.00%
Bootstrap support for A8NG65 as seed ortholog is 100%.
Bootstrap support for P0CD82 as seed ortholog is 100%.

Group of orthologs #154. Best score 67 bits
Score difference with first non-orthologous sequence - C.cinerea:17 C.trachomatis:67

A8NNH7              	100.00%		P0CE03              	100.00%
Bootstrap support for A8NNH7 as seed ortholog is 66%.
Alternative seed ortholog is A8NWN3 (17 bits away from this cluster)
Bootstrap support for P0CE03 as seed ortholog is 100%.

Group of orthologs #155. Best score 67 bits
Score difference with first non-orthologous sequence - C.cinerea:3 C.trachomatis:67

D6RKM4              	100.00%		O84544              	100.00%
Bootstrap support for D6RKM4 as seed ortholog is 44%.
Alternative seed ortholog is A8N3P4 (3 bits away from this cluster)
Bootstrap support for O84544 as seed ortholog is 100%.

Group of orthologs #156. Best score 66 bits
Score difference with first non-orthologous sequence - C.cinerea:66 C.trachomatis:66

D6RNN6              	100.00%		O84150              	100.00%
D6RNN7              	54.15%		
Bootstrap support for D6RNN6 as seed ortholog is 100%.
Bootstrap support for O84150 as seed ortholog is 100%.

Group of orthologs #157. Best score 66 bits
Score difference with first non-orthologous sequence - C.cinerea:66 C.trachomatis:66

A8N1B8              	100.00%		O84532              	100.00%
Bootstrap support for A8N1B8 as seed ortholog is 100%.
Bootstrap support for O84532 as seed ortholog is 100%.

Group of orthologs #158. Best score 66 bits
Score difference with first non-orthologous sequence - C.cinerea:66 C.trachomatis:66

A8PAM8              	100.00%		P0CE06              	100.00%
Bootstrap support for A8PAM8 as seed ortholog is 100%.
Bootstrap support for P0CE06 as seed ortholog is 100%.

Group of orthologs #159. Best score 65 bits
Score difference with first non-orthologous sequence - C.cinerea:65 C.trachomatis:65

D6RNP4              	100.00%		O84503              	100.00%
Bootstrap support for D6RNP4 as seed ortholog is 100%.
Bootstrap support for O84503 as seed ortholog is 100%.

Group of orthologs #160. Best score 62 bits
Score difference with first non-orthologous sequence - C.cinerea:62 C.trachomatis:62

A8N5J8              	100.00%		P0A4C8              	100.00%
Bootstrap support for A8N5J8 as seed ortholog is 100%.
Bootstrap support for P0A4C8 as seed ortholog is 100%.

Group of orthologs #161. Best score 62 bits
Score difference with first non-orthologous sequence - C.cinerea:62 C.trachomatis:62

A8NFD7              	100.00%		O84183              	100.00%
Bootstrap support for A8NFD7 as seed ortholog is 100%.
Bootstrap support for O84183 as seed ortholog is 100%.

Group of orthologs #162. Best score 62 bits
Score difference with first non-orthologous sequence - C.cinerea:62 C.trachomatis:62

A8NFT3              	100.00%		O84833              	100.00%
Bootstrap support for A8NFT3 as seed ortholog is 100%.
Bootstrap support for O84833 as seed ortholog is 100%.

Group of orthologs #163. Best score 62 bits
Score difference with first non-orthologous sequence - C.cinerea:62 C.trachomatis:62

A8NY54              	100.00%		O84792              	100.00%
Bootstrap support for A8NY54 as seed ortholog is 100%.
Bootstrap support for O84792 as seed ortholog is 100%.

Group of orthologs #164. Best score 61 bits
Score difference with first non-orthologous sequence - C.cinerea:61 C.trachomatis:61

A8NTM1              	100.00%		O84684              	100.00%
Bootstrap support for A8NTM1 as seed ortholog is 100%.
Bootstrap support for O84684 as seed ortholog is 100%.

Group of orthologs #165. Best score 60 bits
Score difference with first non-orthologous sequence - C.cinerea:2 C.trachomatis:60

A8N1Z5              	100.00%		O84218              	100.00%
A8NFK5              	36.90%		
A8NNY0              	26.20%		
A8NEA6              	25.18%		
A8N6I3              	14.58%		
A8N6C7              	13.86%		
Bootstrap support for A8N1Z5 as seed ortholog is 41%.
Alternative seed ortholog is A8NF60 (2 bits away from this cluster)
Bootstrap support for O84218 as seed ortholog is 100%.

Group of orthologs #166. Best score 60 bits
Score difference with first non-orthologous sequence - C.cinerea:60 C.trachomatis:60

A8N1J5              	100.00%		O84284              	100.00%
Bootstrap support for A8N1J5 as seed ortholog is 100%.
Bootstrap support for O84284 as seed ortholog is 100%.

Group of orthologs #167. Best score 60 bits
Score difference with first non-orthologous sequence - C.cinerea:60 C.trachomatis:60

A8N934              	100.00%		O84469              	100.00%
Bootstrap support for A8N934 as seed ortholog is 100%.
Bootstrap support for O84469 as seed ortholog is 100%.

Group of orthologs #168. Best score 60 bits
Score difference with first non-orthologous sequence - C.cinerea:10 C.trachomatis:60

A8NK46              	100.00%		P66480              	100.00%
Bootstrap support for A8NK46 as seed ortholog is 66%.
Alternative seed ortholog is A8N9R5 (10 bits away from this cluster)
Bootstrap support for P66480 as seed ortholog is 100%.

Group of orthologs #169. Best score 59 bits
Score difference with first non-orthologous sequence - C.cinerea:59 C.trachomatis:59

A8NE73              	100.00%		P66123              	100.00%
Bootstrap support for A8NE73 as seed ortholog is 100%.
Bootstrap support for P66123 as seed ortholog is 100%.

Group of orthologs #170. Best score 58 bits
Score difference with first non-orthologous sequence - C.cinerea:58 C.trachomatis:58

D6RMJ5              	100.00%		O84221              	100.00%
A8P7P5              	20.81%		
A8P122              	16.47%		
A8P7Q5              	16.04%		
Bootstrap support for D6RMJ5 as seed ortholog is 100%.
Bootstrap support for O84221 as seed ortholog is 100%.

Group of orthologs #171. Best score 58 bits
Score difference with first non-orthologous sequence - C.cinerea:58 C.trachomatis:58

A8NV25              	100.00%		O84499              	100.00%
Bootstrap support for A8NV25 as seed ortholog is 100%.
Bootstrap support for O84499 as seed ortholog is 100%.

Group of orthologs #172. Best score 58 bits
Score difference with first non-orthologous sequence - C.cinerea:58 C.trachomatis:58

D6RL92              	100.00%		P0CE04              	100.00%
Bootstrap support for D6RL92 as seed ortholog is 100%.
Bootstrap support for P0CE04 as seed ortholog is 100%.

Group of orthologs #173. Best score 57 bits
Score difference with first non-orthologous sequence - C.cinerea:57 C.trachomatis:57

D6RJP1              	100.00%		O84527              	100.00%
Bootstrap support for D6RJP1 as seed ortholog is 100%.
Bootstrap support for O84527 as seed ortholog is 100%.

Group of orthologs #174. Best score 56 bits
Score difference with first non-orthologous sequence - C.cinerea:56 C.trachomatis:56

A8NJ67              	100.00%		O84381              	100.00%
A8P7W6              	51.62%		
Bootstrap support for A8NJ67 as seed ortholog is 100%.
Bootstrap support for O84381 as seed ortholog is 100%.

Group of orthologs #175. Best score 56 bits
Score difference with first non-orthologous sequence - C.cinerea:56 C.trachomatis:56

A8NVU6              	100.00%		P0C0Z8              	100.00%
Bootstrap support for A8NVU6 as seed ortholog is 100%.
Bootstrap support for P0C0Z8 as seed ortholog is 100%.

Group of orthologs #176. Best score 55 bits
Score difference with first non-orthologous sequence - C.cinerea:55 C.trachomatis:55

A8NXE9              	100.00%		O84660              	100.00%
                    	       		O84154              	10.60%
                    	       		O84132              	6.51%
Bootstrap support for A8NXE9 as seed ortholog is 100%.
Bootstrap support for O84660 as seed ortholog is 100%.

Group of orthologs #177. Best score 55 bits
Score difference with first non-orthologous sequence - C.cinerea:55 C.trachomatis:55

A8NFE4              	100.00%		P36424              	100.00%
Bootstrap support for A8NFE4 as seed ortholog is 100%.
Bootstrap support for P36424 as seed ortholog is 100%.

Group of orthologs #178. Best score 54 bits
Score difference with first non-orthologous sequence - C.cinerea:54 C.trachomatis:54

A8N1B9              	100.00%		O84128              	100.00%
Bootstrap support for A8N1B9 as seed ortholog is 100%.
Bootstrap support for O84128 as seed ortholog is 100%.

Group of orthologs #179. Best score 54 bits
Score difference with first non-orthologous sequence - C.cinerea:54 C.trachomatis:54

A8P4F1              	100.00%		O84390              	100.00%
Bootstrap support for A8P4F1 as seed ortholog is 100%.
Bootstrap support for O84390 as seed ortholog is 100%.

Group of orthologs #180. Best score 53 bits
Score difference with first non-orthologous sequence - C.cinerea:53 C.trachomatis:53

A8NSJ4              	100.00%		O84781              	100.00%
A8N2D5              	45.96%		
D6RK16              	39.87%		
A8NSP7              	31.79%		
A8NSJ5              	28.25%		
A8NQ94              	18.80%		
A8N635              	18.07%		
A8P6U4              	14.80%		
A8N5V9              	6.36%		
A8PCD7              	5.99%		
A8NXF4              	5.81%		
Bootstrap support for A8NSJ4 as seed ortholog is 100%.
Bootstrap support for O84781 as seed ortholog is 100%.

Group of orthologs #181. Best score 52 bits
Score difference with first non-orthologous sequence - C.cinerea:52 C.trachomatis:52

A8N153              	100.00%		O84029              	100.00%
Bootstrap support for A8N153 as seed ortholog is 100%.
Bootstrap support for O84029 as seed ortholog is 100%.

Group of orthologs #182. Best score 52 bits
Score difference with first non-orthologous sequence - C.cinerea:52 C.trachomatis:52

A8NS23              	100.00%		P0CE02              	100.00%
Bootstrap support for A8NS23 as seed ortholog is 100%.
Bootstrap support for P0CE02 as seed ortholog is 100%.

Group of orthologs #183. Best score 50 bits
Score difference with first non-orthologous sequence - C.cinerea:50 C.trachomatis:50

A8NTD2              	100.00%		O84366              	100.00%
A8NFB1              	23.12%		
Bootstrap support for A8NTD2 as seed ortholog is 100%.
Bootstrap support for O84366 as seed ortholog is 100%.

Group of orthologs #184. Best score 50 bits
Score difference with first non-orthologous sequence - C.cinerea:50 C.trachomatis:50

A8NFN7              	100.00%		O84806              	100.00%
Bootstrap support for A8NFN7 as seed ortholog is 100%.
Bootstrap support for O84806 as seed ortholog is 100%.

Group of orthologs #185. Best score 48 bits
Score difference with first non-orthologous sequence - C.cinerea:48 C.trachomatis:48

D6RKA6              	100.00%		O84547              	100.00%
Bootstrap support for D6RKA6 as seed ortholog is 100%.
Bootstrap support for O84547 as seed ortholog is 100%.

Group of orthologs #186. Best score 47 bits
Score difference with first non-orthologous sequence - C.cinerea:47 C.trachomatis:47

A8N3I6              	100.00%		O84395              	100.00%
Bootstrap support for A8N3I6 as seed ortholog is 100%.
Bootstrap support for O84395 as seed ortholog is 100%.

Group of orthologs #187. Best score 46 bits
Score difference with first non-orthologous sequence - C.cinerea:46 C.trachomatis:46

A8NUD1              	100.00%		O84032              	100.00%
Bootstrap support for A8NUD1 as seed ortholog is 100%.
Bootstrap support for O84032 as seed ortholog is 100%.

Group of orthologs #188. Best score 46 bits
Score difference with first non-orthologous sequence - C.cinerea:46 C.trachomatis:46

A8PCI9              	100.00%		P0CE07              	100.00%
Bootstrap support for A8PCI9 as seed ortholog is 100%.
Bootstrap support for P0CE07 as seed ortholog is 100%.

Group of orthologs #189. Best score 45 bits
Score difference with first non-orthologous sequence - C.cinerea:45 C.trachomatis:45

A8N1B7              	100.00%		P0CD80              	100.00%
A8N2F5              	40.00%		
Bootstrap support for A8N1B7 as seed ortholog is 100%.
Bootstrap support for P0CD80 as seed ortholog is 100%.

Group of orthologs #190. Best score 44 bits
Score difference with first non-orthologous sequence - C.cinerea:44 C.trachomatis:44

A8NZ80              	100.00%		O84611              	100.00%
Bootstrap support for A8NZ80 as seed ortholog is 100%.
Bootstrap support for O84611 as seed ortholog is 100%.