###################################
1266 groups of orthologs
2045 in-paralogs from C.brenneri
1337 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3222 bits
Score difference with first non-orthologous sequence - C.brenneri:3222 P.jiroveci:3222

G0N5F0              	100.00%		L0PCQ0              	100.00%
Bootstrap support for G0N5F0 as seed ortholog is 100%.
Bootstrap support for L0PCQ0 as seed ortholog is 100%.

Group of orthologs #2. Best score 1906 bits
Score difference with first non-orthologous sequence - C.brenneri:956 P.jiroveci:844

G0MCR5              	100.00%		L0PHB1              	100.00%
Bootstrap support for G0MCR5 as seed ortholog is 100%.
Bootstrap support for L0PHB1 as seed ortholog is 100%.

Group of orthologs #3. Best score 1807 bits
Score difference with first non-orthologous sequence - C.brenneri:1807 P.jiroveci:1807

G0N244              	100.00%		L0PB90              	100.00%
Bootstrap support for G0N244 as seed ortholog is 100%.
Bootstrap support for L0PB90 as seed ortholog is 100%.

Group of orthologs #4. Best score 1700 bits
Score difference with first non-orthologous sequence - C.brenneri:1700 P.jiroveci:1700

G0MKK4              	100.00%		L0PBF5              	100.00%
Bootstrap support for G0MKK4 as seed ortholog is 100%.
Bootstrap support for L0PBF5 as seed ortholog is 100%.

Group of orthologs #5. Best score 1650 bits
Score difference with first non-orthologous sequence - C.brenneri:1650 P.jiroveci:1650

G0N3L4              	100.00%		L0P7C3              	100.00%
G0P6A6              	99.09%		
Bootstrap support for G0N3L4 as seed ortholog is 100%.
Bootstrap support for L0P7C3 as seed ortholog is 100%.

Group of orthologs #6. Best score 1285 bits
Score difference with first non-orthologous sequence - C.brenneri:1285 P.jiroveci:1285

G0NFR6              	100.00%		L0PGJ4              	100.00%
G0PEY2              	43.01%		
Bootstrap support for G0NFR6 as seed ortholog is 100%.
Bootstrap support for L0PGJ4 as seed ortholog is 100%.

Group of orthologs #7. Best score 1280 bits
Score difference with first non-orthologous sequence - C.brenneri:544 P.jiroveci:1280

B6VBN7              	100.00%		L0PG77              	100.00%
Bootstrap support for B6VBN7 as seed ortholog is 100%.
Bootstrap support for L0PG77 as seed ortholog is 100%.

Group of orthologs #8. Best score 1258 bits
Score difference with first non-orthologous sequence - C.brenneri:1258 P.jiroveci:1258

G0MG47              	100.00%		L0PG53              	100.00%
Bootstrap support for G0MG47 as seed ortholog is 100%.
Bootstrap support for L0PG53 as seed ortholog is 100%.

Group of orthologs #9. Best score 1191 bits
Score difference with first non-orthologous sequence - C.brenneri:359 P.jiroveci:1191

G0NR59              	100.00%		L0P818              	100.00%
Bootstrap support for G0NR59 as seed ortholog is 100%.
Bootstrap support for L0P818 as seed ortholog is 100%.

Group of orthologs #10. Best score 1116 bits
Score difference with first non-orthologous sequence - C.brenneri:1116 P.jiroveci:1116

G0MJX6              	100.00%		L0PBY6              	100.00%
Bootstrap support for G0MJX6 as seed ortholog is 100%.
Bootstrap support for L0PBY6 as seed ortholog is 100%.

Group of orthologs #11. Best score 1099 bits
Score difference with first non-orthologous sequence - C.brenneri:1099 P.jiroveci:1099

G0MAW6              	100.00%		L0PGI2              	100.00%
G0MRC6              	7.18%		
Bootstrap support for G0MAW6 as seed ortholog is 100%.
Bootstrap support for L0PGI2 as seed ortholog is 100%.

Group of orthologs #12. Best score 1082 bits
Score difference with first non-orthologous sequence - C.brenneri:1082 P.jiroveci:1082

G0NHF1              	100.00%		L0PEQ1              	100.00%
G0NVH6              	48.24%		
Bootstrap support for G0NHF1 as seed ortholog is 100%.
Bootstrap support for L0PEQ1 as seed ortholog is 100%.

Group of orthologs #13. Best score 1069 bits
Score difference with first non-orthologous sequence - C.brenneri:816 P.jiroveci:1069

G0MLI9              	100.00%		L0PBE4              	100.00%
Bootstrap support for G0MLI9 as seed ortholog is 100%.
Bootstrap support for L0PBE4 as seed ortholog is 100%.

Group of orthologs #14. Best score 991 bits
Score difference with first non-orthologous sequence - C.brenneri:477 P.jiroveci:548

G0MEX9              	100.00%		L0PG21              	100.00%
Bootstrap support for G0MEX9 as seed ortholog is 100%.
Bootstrap support for L0PG21 as seed ortholog is 100%.

Group of orthologs #15. Best score 978 bits
Score difference with first non-orthologous sequence - C.brenneri:299 P.jiroveci:482

G0MKF1              	100.00%		L0PB13              	100.00%
Bootstrap support for G0MKF1 as seed ortholog is 99%.
Bootstrap support for L0PB13 as seed ortholog is 100%.

Group of orthologs #16. Best score 960 bits
Score difference with first non-orthologous sequence - C.brenneri:793 P.jiroveci:960

G0N3G9              	100.00%		L0PFN4              	100.00%
Bootstrap support for G0N3G9 as seed ortholog is 100%.
Bootstrap support for L0PFN4 as seed ortholog is 100%.

Group of orthologs #17. Best score 953 bits
Score difference with first non-orthologous sequence - C.brenneri:126 P.jiroveci:743

G0MRH9              	100.00%		L0PEK6              	100.00%
Bootstrap support for G0MRH9 as seed ortholog is 99%.
Bootstrap support for L0PEK6 as seed ortholog is 100%.

Group of orthologs #18. Best score 936 bits
Score difference with first non-orthologous sequence - C.brenneri:936 P.jiroveci:936

G0P9Z1              	100.00%		L0P7P6              	100.00%
Bootstrap support for G0P9Z1 as seed ortholog is 100%.
Bootstrap support for L0P7P6 as seed ortholog is 100%.

Group of orthologs #19. Best score 917 bits
Score difference with first non-orthologous sequence - C.brenneri:172 P.jiroveci:406

G0NZW2              	100.00%		L0PAJ7              	100.00%
Bootstrap support for G0NZW2 as seed ortholog is 99%.
Bootstrap support for L0PAJ7 as seed ortholog is 100%.

Group of orthologs #20. Best score 910 bits
Score difference with first non-orthologous sequence - C.brenneri:910 P.jiroveci:910

G0NUA6              	100.00%		L0P928              	100.00%
Bootstrap support for G0NUA6 as seed ortholog is 100%.
Bootstrap support for L0P928 as seed ortholog is 100%.

Group of orthologs #21. Best score 904 bits
Score difference with first non-orthologous sequence - C.brenneri:564 P.jiroveci:827

G0MLZ5              	100.00%		L0PAG9              	100.00%
G0PB94              	100.00%		
Bootstrap support for G0MLZ5 as seed ortholog is 100%.
Bootstrap support for G0PB94 as seed ortholog is 100%.
Bootstrap support for L0PAG9 as seed ortholog is 100%.

Group of orthologs #22. Best score 903 bits
Score difference with first non-orthologous sequence - C.brenneri:167 P.jiroveci:903

G0M6Z5              	100.00%		L0PDI4              	100.00%
G0MFH6              	30.38%		
G0NE18              	11.34%		
G0PK23              	11.34%		
G0MJL3              	10.34%		
G0MP96              	10.28%		
G0NKK7              	7.79%		
G0MX92              	7.14%		
Bootstrap support for G0M6Z5 as seed ortholog is 99%.
Bootstrap support for L0PDI4 as seed ortholog is 100%.

Group of orthologs #23. Best score 903 bits
Score difference with first non-orthologous sequence - C.brenneri:297 P.jiroveci:903

G0NWS4              	100.00%		L0PAW9              	100.00%
                    	       		L0PBZ0              	70.11%
Bootstrap support for G0NWS4 as seed ortholog is 100%.
Bootstrap support for L0PAW9 as seed ortholog is 100%.

Group of orthologs #24. Best score 889 bits
Score difference with first non-orthologous sequence - C.brenneri:889 P.jiroveci:889

G0NGV1              	100.00%		L0PDK3              	100.00%
G0PK72              	93.70%		
Bootstrap support for G0NGV1 as seed ortholog is 100%.
Bootstrap support for L0PDK3 as seed ortholog is 100%.

Group of orthologs #25. Best score 886 bits
Score difference with first non-orthologous sequence - C.brenneri:355 P.jiroveci:305

G0NZQ8              	100.00%		L0PDB3              	100.00%
G0NFU8              	98.79%		
Bootstrap support for G0NZQ8 as seed ortholog is 100%.
Bootstrap support for L0PDB3 as seed ortholog is 99%.

Group of orthologs #26. Best score 879 bits
Score difference with first non-orthologous sequence - C.brenneri:359 P.jiroveci:879

G0NUK0              	100.00%		L0PEW0              	100.00%
G0PC01              	99.30%		
Bootstrap support for G0NUK0 as seed ortholog is 100%.
Bootstrap support for L0PEW0 as seed ortholog is 100%.

Group of orthologs #27. Best score 879 bits
Score difference with first non-orthologous sequence - C.brenneri:879 P.jiroveci:879

G0PLA7              	100.00%		L0PCR2              	100.00%
Bootstrap support for G0PLA7 as seed ortholog is 100%.
Bootstrap support for L0PCR2 as seed ortholog is 100%.

Group of orthologs #28. Best score 871 bits
Score difference with first non-orthologous sequence - C.brenneri:871 P.jiroveci:871

G0MBQ7              	100.00%		L0P915              	100.00%
Bootstrap support for G0MBQ7 as seed ortholog is 100%.
Bootstrap support for L0P915 as seed ortholog is 100%.

Group of orthologs #29. Best score 870 bits
Score difference with first non-orthologous sequence - C.brenneri:870 P.jiroveci:870

G0MTM9              	100.00%		L0PFU4              	100.00%
Bootstrap support for G0MTM9 as seed ortholog is 100%.
Bootstrap support for L0PFU4 as seed ortholog is 100%.

Group of orthologs #30. Best score 868 bits
Score difference with first non-orthologous sequence - C.brenneri:226 P.jiroveci:358

G0MPJ0              	100.00%		L0PFC8              	100.00%
Bootstrap support for G0MPJ0 as seed ortholog is 100%.
Bootstrap support for L0PFC8 as seed ortholog is 100%.

Group of orthologs #31. Best score 857 bits
Score difference with first non-orthologous sequence - C.brenneri:857 P.jiroveci:857

G0PDT6              	100.00%		L0P7V0              	100.00%
G0PEQ4              	100.00%		
Bootstrap support for G0PDT6 as seed ortholog is 100%.
Bootstrap support for G0PEQ4 as seed ortholog is 100%.
Bootstrap support for L0P7V0 as seed ortholog is 100%.

Group of orthologs #32. Best score 855 bits
Score difference with first non-orthologous sequence - C.brenneri:132 P.jiroveci:665

G0MSZ0              	100.00%		L0PFV0              	100.00%
G0N9E3              	56.14%		
Bootstrap support for G0MSZ0 as seed ortholog is 99%.
Bootstrap support for L0PFV0 as seed ortholog is 100%.

Group of orthologs #33. Best score 853 bits
Score difference with first non-orthologous sequence - C.brenneri:493 P.jiroveci:853

G0MLX0              	100.00%		L0P9P7              	100.00%
G0PGG1              	85.48%		
Bootstrap support for G0MLX0 as seed ortholog is 100%.
Bootstrap support for L0P9P7 as seed ortholog is 100%.

Group of orthologs #34. Best score 838 bits
Score difference with first non-orthologous sequence - C.brenneri:838 P.jiroveci:838

G0P177              	100.00%		L0PCG8              	100.00%
G0P179              	100.00%		
Bootstrap support for G0P177 as seed ortholog is 100%.
Bootstrap support for G0P179 as seed ortholog is 100%.
Bootstrap support for L0PCG8 as seed ortholog is 100%.

Group of orthologs #35. Best score 828 bits
Score difference with first non-orthologous sequence - C.brenneri:286 P.jiroveci:669

G0PJ01              	100.00%		L0PFS2              	100.00%
G0MTS9              	98.42%		
Bootstrap support for G0PJ01 as seed ortholog is 100%.
Bootstrap support for L0PFS2 as seed ortholog is 100%.

Group of orthologs #36. Best score 827 bits
Score difference with first non-orthologous sequence - C.brenneri:473 P.jiroveci:523

G0ML10              	100.00%		L0PCW9              	100.00%
Bootstrap support for G0ML10 as seed ortholog is 100%.
Bootstrap support for L0PCW9 as seed ortholog is 100%.

Group of orthologs #37. Best score 826 bits
Score difference with first non-orthologous sequence - C.brenneri:475 P.jiroveci:826

G0NRM6              	100.00%		L0PEL5              	100.00%
G0NRM2              	91.08%		L0PGC2              	48.17%
G0NM09              	62.78%		
G0PGU8              	62.54%		
Bootstrap support for G0NRM6 as seed ortholog is 100%.
Bootstrap support for L0PEL5 as seed ortholog is 100%.

Group of orthologs #38. Best score 814 bits
Score difference with first non-orthologous sequence - C.brenneri:814 P.jiroveci:814

G0NN87              	100.00%		L0P9H4              	100.00%
G0NH88              	53.36%		
G0NVF4              	52.95%		
Bootstrap support for G0NN87 as seed ortholog is 100%.
Bootstrap support for L0P9H4 as seed ortholog is 100%.

Group of orthologs #39. Best score 800 bits
Score difference with first non-orthologous sequence - C.brenneri:83 P.jiroveci:800

G0N603              	100.00%		L0PG61              	100.00%
Bootstrap support for G0N603 as seed ortholog is 87%.
Bootstrap support for L0PG61 as seed ortholog is 100%.

Group of orthologs #40. Best score 796 bits
Score difference with first non-orthologous sequence - C.brenneri:232 P.jiroveci:796

G0NUM9              	100.00%		L0PCK0              	100.00%
G0PI55              	25.99%		L0P7U1              	99.19%
Bootstrap support for G0NUM9 as seed ortholog is 100%.
Bootstrap support for L0PCK0 as seed ortholog is 100%.

Group of orthologs #41. Best score 794 bits
Score difference with first non-orthologous sequence - C.brenneri:311 P.jiroveci:794

G0PDR8              	100.00%		L0PDQ4              	100.00%
G0NJQ7              	98.23%		
Bootstrap support for G0PDR8 as seed ortholog is 100%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #42. Best score 790 bits
Score difference with first non-orthologous sequence - C.brenneri:790 P.jiroveci:790

G0PCL2              	100.00%		L0PG12              	100.00%
G0N6Z0              	63.46%		
Bootstrap support for G0PCL2 as seed ortholog is 100%.
Bootstrap support for L0PG12 as seed ortholog is 100%.

Group of orthologs #43. Best score 789 bits
Score difference with first non-orthologous sequence - C.brenneri:789 P.jiroveci:690

G0NMA2              	100.00%		L0PH89              	100.00%
Bootstrap support for G0NMA2 as seed ortholog is 100%.
Bootstrap support for L0PH89 as seed ortholog is 100%.

Group of orthologs #44. Best score 779 bits
Score difference with first non-orthologous sequence - C.brenneri:779 P.jiroveci:779

G0MPB0              	100.00%		L0PFF9              	100.00%
G0PLV1              	98.17%		
Bootstrap support for G0MPB0 as seed ortholog is 100%.
Bootstrap support for L0PFF9 as seed ortholog is 100%.

Group of orthologs #45. Best score 777 bits
Score difference with first non-orthologous sequence - C.brenneri:777 P.jiroveci:777

G0N9A1              	100.00%		L0PAV3              	100.00%
G0N7T0              	81.03%		
Bootstrap support for G0N9A1 as seed ortholog is 100%.
Bootstrap support for L0PAV3 as seed ortholog is 100%.

Group of orthologs #46. Best score 774 bits
Score difference with first non-orthologous sequence - C.brenneri:774 P.jiroveci:774

G0N376              	100.00%		L0PE96              	100.00%
Bootstrap support for G0N376 as seed ortholog is 100%.
Bootstrap support for L0PE96 as seed ortholog is 100%.

Group of orthologs #47. Best score 773 bits
Score difference with first non-orthologous sequence - C.brenneri:773 P.jiroveci:773

G0P4B6              	100.00%		L0PB43              	100.00%
Bootstrap support for G0P4B6 as seed ortholog is 100%.
Bootstrap support for L0PB43 as seed ortholog is 100%.

Group of orthologs #48. Best score 764 bits
Score difference with first non-orthologous sequence - C.brenneri:657 P.jiroveci:764

G0MC67              	100.00%		L0PDF1              	100.00%
Bootstrap support for G0MC67 as seed ortholog is 100%.
Bootstrap support for L0PDF1 as seed ortholog is 100%.

Group of orthologs #49. Best score 755 bits
Score difference with first non-orthologous sequence - C.brenneri:755 P.jiroveci:755

G0P6J7              	100.00%		L0P7X5              	100.00%
Bootstrap support for G0P6J7 as seed ortholog is 100%.
Bootstrap support for L0P7X5 as seed ortholog is 100%.

Group of orthologs #50. Best score 745 bits
Score difference with first non-orthologous sequence - C.brenneri:745 P.jiroveci:745

G0N2S3              	100.00%		L0PFJ0              	100.00%
G0N2T3              	74.48%		
Bootstrap support for G0N2S3 as seed ortholog is 100%.
Bootstrap support for L0PFJ0 as seed ortholog is 100%.

Group of orthologs #51. Best score 743 bits
Score difference with first non-orthologous sequence - C.brenneri:612 P.jiroveci:743

G0MES0              	100.00%		L0PBA5              	100.00%
Bootstrap support for G0MES0 as seed ortholog is 100%.
Bootstrap support for L0PBA5 as seed ortholog is 100%.

Group of orthologs #52. Best score 740 bits
Score difference with first non-orthologous sequence - C.brenneri:359 P.jiroveci:740

G0MGW5              	100.00%		L0PBR4              	100.00%
G0MWI1              	62.43%		
G0N5R9              	61.85%		
G0MBU6              	54.34%		
G0MKZ2              	53.76%		
Bootstrap support for G0MGW5 as seed ortholog is 100%.
Bootstrap support for L0PBR4 as seed ortholog is 100%.

Group of orthologs #53. Best score 729 bits
Score difference with first non-orthologous sequence - C.brenneri:729 P.jiroveci:729

G0NHT1              	100.00%		L0PAQ3              	100.00%
G0PJ13              	100.00%		
Bootstrap support for G0NHT1 as seed ortholog is 100%.
Bootstrap support for G0PJ13 as seed ortholog is 100%.
Bootstrap support for L0PAQ3 as seed ortholog is 100%.

Group of orthologs #54. Best score 728 bits
Score difference with first non-orthologous sequence - C.brenneri:495 P.jiroveci:728

G0NSA3              	100.00%		L0PB83              	100.00%
G0N639              	98.51%		
Bootstrap support for G0NSA3 as seed ortholog is 100%.
Bootstrap support for L0PB83 as seed ortholog is 100%.

Group of orthologs #55. Best score 726 bits
Score difference with first non-orthologous sequence - C.brenneri:726 P.jiroveci:726

G0P8A8              	100.00%		L0PAK7              	100.00%
G0PEZ8              	98.15%		L0P8F2              	67.67%
Bootstrap support for G0P8A8 as seed ortholog is 100%.
Bootstrap support for L0PAK7 as seed ortholog is 100%.

Group of orthologs #56. Best score 721 bits
Score difference with first non-orthologous sequence - C.brenneri:721 P.jiroveci:721

G0N0M3              	100.00%		L0PAN4              	100.00%
G0N0Z8              	72.76%		
Bootstrap support for G0N0M3 as seed ortholog is 100%.
Bootstrap support for L0PAN4 as seed ortholog is 100%.

Group of orthologs #57. Best score 700 bits
Score difference with first non-orthologous sequence - C.brenneri:509 P.jiroveci:700

G0MYP1              	100.00%		L0PD55              	100.00%
Bootstrap support for G0MYP1 as seed ortholog is 100%.
Bootstrap support for L0PD55 as seed ortholog is 100%.

Group of orthologs #58. Best score 694 bits
Score difference with first non-orthologous sequence - C.brenneri:625 P.jiroveci:694

G0MXL0              	100.00%		L0P7V1              	100.00%
Bootstrap support for G0MXL0 as seed ortholog is 100%.
Bootstrap support for L0P7V1 as seed ortholog is 100%.

Group of orthologs #59. Best score 692 bits
Score difference with first non-orthologous sequence - C.brenneri:692 P.jiroveci:692

G0M8W0              	100.00%		L0P7K0              	100.00%
Bootstrap support for G0M8W0 as seed ortholog is 100%.
Bootstrap support for L0P7K0 as seed ortholog is 100%.

Group of orthologs #60. Best score 692 bits
Score difference with first non-orthologous sequence - C.brenneri:502 P.jiroveci:692

G0P306              	100.00%		L0PB85              	100.00%
Bootstrap support for G0P306 as seed ortholog is 100%.
Bootstrap support for L0PB85 as seed ortholog is 100%.

Group of orthologs #61. Best score 690 bits
Score difference with first non-orthologous sequence - C.brenneri:690 P.jiroveci:690

G0NCZ3              	100.00%		L0PA62              	100.00%
G0NBY3              	93.08%		
Bootstrap support for G0NCZ3 as seed ortholog is 100%.
Bootstrap support for L0PA62 as seed ortholog is 100%.

Group of orthologs #62. Best score 689 bits
Score difference with first non-orthologous sequence - C.brenneri:456 P.jiroveci:689

G0ME80              	100.00%		L0PGA5              	100.00%
Bootstrap support for G0ME80 as seed ortholog is 100%.
Bootstrap support for L0PGA5 as seed ortholog is 100%.

Group of orthologs #63. Best score 688 bits
Score difference with first non-orthologous sequence - C.brenneri:688 P.jiroveci:688

G0NV08              	100.00%		L0PC54              	100.00%
Bootstrap support for G0NV08 as seed ortholog is 100%.
Bootstrap support for L0PC54 as seed ortholog is 100%.

Group of orthologs #64. Best score 685 bits
Score difference with first non-orthologous sequence - C.brenneri:49 P.jiroveci:581

G0MKY9              	100.00%		L0PAC9              	100.00%
G0MZH9              	5.53%		
Bootstrap support for G0MKY9 as seed ortholog is 74%.
Alternative seed ortholog is G0P1C2 (49 bits away from this cluster)
Bootstrap support for L0PAC9 as seed ortholog is 100%.

Group of orthologs #65. Best score 685 bits
Score difference with first non-orthologous sequence - C.brenneri:685 P.jiroveci:685

G0PMQ3              	100.00%		L0PAS8              	100.00%
Bootstrap support for G0PMQ3 as seed ortholog is 100%.
Bootstrap support for L0PAS8 as seed ortholog is 100%.

Group of orthologs #66. Best score 683 bits
Score difference with first non-orthologous sequence - C.brenneri:683 P.jiroveci:683

G0NZX2              	100.00%		L0P9R9              	100.00%
Bootstrap support for G0NZX2 as seed ortholog is 100%.
Bootstrap support for L0P9R9 as seed ortholog is 100%.

Group of orthologs #67. Best score 681 bits
Score difference with first non-orthologous sequence - C.brenneri:115 P.jiroveci:305

G0N8H6              	100.00%		L0PA91              	100.00%
G0N8I1              	97.50%		
G0N8H7              	97.50%		
G0ML58              	46.25%		
Bootstrap support for G0N8H6 as seed ortholog is 100%.
Bootstrap support for L0PA91 as seed ortholog is 100%.

Group of orthologs #68. Best score 678 bits
Score difference with first non-orthologous sequence - C.brenneri:537 P.jiroveci:423

G0MLC3              	100.00%		L0PC93              	100.00%
Bootstrap support for G0MLC3 as seed ortholog is 100%.
Bootstrap support for L0PC93 as seed ortholog is 100%.

Group of orthologs #69. Best score 677 bits
Score difference with first non-orthologous sequence - C.brenneri:677 P.jiroveci:677

G0MVF5              	100.00%		L0P971              	100.00%
Bootstrap support for G0MVF5 as seed ortholog is 100%.
Bootstrap support for L0P971 as seed ortholog is 100%.

Group of orthologs #70. Best score 667 bits
Score difference with first non-orthologous sequence - C.brenneri:356 P.jiroveci:387

G0NR88              	100.00%		L0PBP8              	100.00%
G0NR91              	98.91%		
Bootstrap support for G0NR88 as seed ortholog is 100%.
Bootstrap support for L0PBP8 as seed ortholog is 100%.

Group of orthologs #71. Best score 667 bits
Score difference with first non-orthologous sequence - C.brenneri:454 P.jiroveci:667

G0P004              	100.00%		L0P945              	100.00%
Bootstrap support for G0P004 as seed ortholog is 100%.
Bootstrap support for L0P945 as seed ortholog is 100%.

Group of orthologs #72. Best score 659 bits
Score difference with first non-orthologous sequence - C.brenneri:659 P.jiroveci:659

G0PCW5              	100.00%		L0PDF3              	100.00%
G0N3V4              	90.88%		
Bootstrap support for G0PCW5 as seed ortholog is 100%.
Bootstrap support for L0PDF3 as seed ortholog is 100%.

Group of orthologs #73. Best score 654 bits
Score difference with first non-orthologous sequence - C.brenneri:560 P.jiroveci:487

G0NLW2              	100.00%		L0PBQ6              	100.00%
G0NRZ3              	100.00%		
Bootstrap support for G0NLW2 as seed ortholog is 100%.
Bootstrap support for G0NRZ3 as seed ortholog is 100%.
Bootstrap support for L0PBQ6 as seed ortholog is 100%.

Group of orthologs #74. Best score 651 bits
Score difference with first non-orthologous sequence - C.brenneri:651 P.jiroveci:651

G0NZR8              	100.00%		L0PEU6              	100.00%
G0NFT8              	99.80%		
Bootstrap support for G0NZR8 as seed ortholog is 100%.
Bootstrap support for L0PEU6 as seed ortholog is 100%.

Group of orthologs #75. Best score 651 bits
Score difference with first non-orthologous sequence - C.brenneri:450 P.jiroveci:651

G0P3C4              	100.00%		L0PG19              	100.00%
G0NPN3              	19.02%		
Bootstrap support for G0P3C4 as seed ortholog is 100%.
Bootstrap support for L0PG19 as seed ortholog is 100%.

Group of orthologs #76. Best score 651 bits
Score difference with first non-orthologous sequence - C.brenneri:651 P.jiroveci:651

G0MV41              	100.00%		L0PFL5              	100.00%
Bootstrap support for G0MV41 as seed ortholog is 100%.
Bootstrap support for L0PFL5 as seed ortholog is 100%.

Group of orthologs #77. Best score 646 bits
Score difference with first non-orthologous sequence - C.brenneri:646 P.jiroveci:646

G0MQB6              	100.00%		L0PAP2              	100.00%
G0PME2              	83.91%		
Bootstrap support for G0MQB6 as seed ortholog is 100%.
Bootstrap support for L0PAP2 as seed ortholog is 100%.

Group of orthologs #78. Best score 646 bits
Score difference with first non-orthologous sequence - C.brenneri:142 P.jiroveci:646

G0NTU0              	100.00%		L0PGU1              	100.00%
Bootstrap support for G0NTU0 as seed ortholog is 98%.
Bootstrap support for L0PGU1 as seed ortholog is 100%.

Group of orthologs #79. Best score 644 bits
Score difference with first non-orthologous sequence - C.brenneri:348 P.jiroveci:644

G0NH90              	100.00%		L0PEK9              	100.00%
G0NVF2              	99.14%		
Bootstrap support for G0NH90 as seed ortholog is 100%.
Bootstrap support for L0PEK9 as seed ortholog is 100%.

Group of orthologs #80. Best score 628 bits
Score difference with first non-orthologous sequence - C.brenneri:628 P.jiroveci:628

G0MGC1              	100.00%		L0PG32              	100.00%
Bootstrap support for G0MGC1 as seed ortholog is 100%.
Bootstrap support for L0PG32 as seed ortholog is 100%.

Group of orthologs #81. Best score 628 bits
Score difference with first non-orthologous sequence - C.brenneri:628 P.jiroveci:628

G0P8I0              	100.00%		L0P773              	100.00%
Bootstrap support for G0P8I0 as seed ortholog is 100%.
Bootstrap support for L0P773 as seed ortholog is 100%.

Group of orthologs #82. Best score 627 bits
Score difference with first non-orthologous sequence - C.brenneri:440 P.jiroveci:627

G0NP30              	100.00%		L0PER6              	100.00%
G0NP33              	59.64%		
Bootstrap support for G0NP30 as seed ortholog is 100%.
Bootstrap support for L0PER6 as seed ortholog is 100%.

Group of orthologs #83. Best score 627 bits
Score difference with first non-orthologous sequence - C.brenneri:627 P.jiroveci:566

G0P3M9              	100.00%		L0PBD7              	100.00%
Bootstrap support for G0P3M9 as seed ortholog is 100%.
Bootstrap support for L0PBD7 as seed ortholog is 100%.

Group of orthologs #84. Best score 625 bits
Score difference with first non-orthologous sequence - C.brenneri:568 P.jiroveci:625

G0NBT5              	100.00%		L0PDM6              	100.00%
Bootstrap support for G0NBT5 as seed ortholog is 100%.
Bootstrap support for L0PDM6 as seed ortholog is 100%.

Group of orthologs #85. Best score 625 bits
Score difference with first non-orthologous sequence - C.brenneri:346 P.jiroveci:625

G0NYE2              	100.00%		L0PC37              	100.00%
Bootstrap support for G0NYE2 as seed ortholog is 100%.
Bootstrap support for L0PC37 as seed ortholog is 100%.

Group of orthologs #86. Best score 623 bits
Score difference with first non-orthologous sequence - C.brenneri:182 P.jiroveci:623

G0M6Z0              	100.00%		L0PEQ8              	100.00%
Bootstrap support for G0M6Z0 as seed ortholog is 99%.
Bootstrap support for L0PEQ8 as seed ortholog is 100%.

Group of orthologs #87. Best score 623 bits
Score difference with first non-orthologous sequence - C.brenneri:623 P.jiroveci:623

G0MZ47              	100.00%		L0P710              	100.00%
Bootstrap support for G0MZ47 as seed ortholog is 100%.
Bootstrap support for L0P710 as seed ortholog is 100%.

Group of orthologs #88. Best score 622 bits
Score difference with first non-orthologous sequence - C.brenneri:622 P.jiroveci:313

G0N9Q3              	100.00%		L0PFG7              	100.00%
Bootstrap support for G0N9Q3 as seed ortholog is 100%.
Bootstrap support for L0PFG7 as seed ortholog is 100%.

Group of orthologs #89. Best score 621 bits
Score difference with first non-orthologous sequence - C.brenneri:621 P.jiroveci:504

G0MM02              	100.00%		L0P8C8              	100.00%
G0PBA1              	100.00%		
Bootstrap support for G0MM02 as seed ortholog is 100%.
Bootstrap support for G0PBA1 as seed ortholog is 100%.
Bootstrap support for L0P8C8 as seed ortholog is 100%.

Group of orthologs #90. Best score 621 bits
Score difference with first non-orthologous sequence - C.brenneri:331 P.jiroveci:621

G0NAB5              	100.00%		L0P7L0              	100.00%
                    	       		L0PCI7              	43.26%
Bootstrap support for G0NAB5 as seed ortholog is 100%.
Bootstrap support for L0P7L0 as seed ortholog is 100%.

Group of orthologs #91. Best score 620 bits
Score difference with first non-orthologous sequence - C.brenneri:620 P.jiroveci:620

G0PM35              	100.00%		L0PBV5              	100.00%
G0NZ14              	99.90%		
Bootstrap support for G0PM35 as seed ortholog is 100%.
Bootstrap support for L0PBV5 as seed ortholog is 100%.

Group of orthologs #92. Best score 615 bits
Score difference with first non-orthologous sequence - C.brenneri:615 P.jiroveci:615

G0P174              	100.00%		L0PDJ1              	100.00%
Bootstrap support for G0P174 as seed ortholog is 100%.
Bootstrap support for L0PDJ1 as seed ortholog is 100%.

Group of orthologs #93. Best score 609 bits
Score difference with first non-orthologous sequence - C.brenneri:609 P.jiroveci:609

G0NCW1              	100.00%		L0P9S1              	100.00%
G0NM83              	5.01%		
Bootstrap support for G0NCW1 as seed ortholog is 100%.
Bootstrap support for L0P9S1 as seed ortholog is 100%.

Group of orthologs #94. Best score 607 bits
Score difference with first non-orthologous sequence - C.brenneri:607 P.jiroveci:607

G0NL10              	100.00%		L0PBY5              	100.00%
G0MLX6              	5.54%		
Bootstrap support for G0NL10 as seed ortholog is 100%.
Bootstrap support for L0PBY5 as seed ortholog is 100%.

Group of orthologs #95. Best score 607 bits
Score difference with first non-orthologous sequence - C.brenneri:607 P.jiroveci:607

G0PIP7              	100.00%		L0P8M6              	100.00%
G0NUQ5              	99.72%		
Bootstrap support for G0PIP7 as seed ortholog is 100%.
Bootstrap support for L0P8M6 as seed ortholog is 100%.

Group of orthologs #96. Best score 603 bits
Score difference with first non-orthologous sequence - C.brenneri:258 P.jiroveci:603

G0MGV3              	100.00%		L0P8G2              	100.00%
G0ND67              	32.24%		
G0ND69              	19.52%		
Bootstrap support for G0MGV3 as seed ortholog is 100%.
Bootstrap support for L0P8G2 as seed ortholog is 100%.

Group of orthologs #97. Best score 603 bits
Score difference with first non-orthologous sequence - C.brenneri:368 P.jiroveci:603

G0MTA9              	100.00%		L0PG45              	100.00%
Bootstrap support for G0MTA9 as seed ortholog is 100%.
Bootstrap support for L0PG45 as seed ortholog is 100%.

Group of orthologs #98. Best score 602 bits
Score difference with first non-orthologous sequence - C.brenneri:266 P.jiroveci:201

G0NXP5              	100.00%		L0PE26              	100.00%
Bootstrap support for G0NXP5 as seed ortholog is 99%.
Bootstrap support for L0PE26 as seed ortholog is 99%.

Group of orthologs #99. Best score 599 bits
Score difference with first non-orthologous sequence - C.brenneri:389 P.jiroveci:599

G0NIM4              	100.00%		L0P976              	100.00%
Bootstrap support for G0NIM4 as seed ortholog is 100%.
Bootstrap support for L0P976 as seed ortholog is 100%.

Group of orthologs #100. Best score 597 bits
Score difference with first non-orthologous sequence - C.brenneri:33 P.jiroveci:125

G0NBV0              	100.00%		L0P9U6              	100.00%
Bootstrap support for G0NBV0 as seed ortholog is 74%.
Alternative seed ortholog is G0NAL8 (33 bits away from this cluster)
Bootstrap support for L0P9U6 as seed ortholog is 99%.

Group of orthologs #101. Best score 588 bits
Score difference with first non-orthologous sequence - C.brenneri:588 P.jiroveci:588

G0P9C2              	100.00%		L0PDK6              	100.00%
Bootstrap support for G0P9C2 as seed ortholog is 100%.
Bootstrap support for L0PDK6 as seed ortholog is 100%.

Group of orthologs #102. Best score 586 bits
Score difference with first non-orthologous sequence - C.brenneri:269 P.jiroveci:375

G0PJQ4              	100.00%		L0P8E7              	100.00%
G0PN85              	81.87%		
Bootstrap support for G0PJQ4 as seed ortholog is 100%.
Bootstrap support for L0P8E7 as seed ortholog is 100%.

Group of orthologs #103. Best score 585 bits
Score difference with first non-orthologous sequence - C.brenneri:315 P.jiroveci:339

G0MZY5              	100.00%		L0PFW1              	100.00%
G0P8B4              	51.00%		
G0NRC9              	41.14%		
G0PAQ6              	39.91%		
Bootstrap support for G0MZY5 as seed ortholog is 100%.
Bootstrap support for L0PFW1 as seed ortholog is 99%.

Group of orthologs #104. Best score 585 bits
Score difference with first non-orthologous sequence - C.brenneri:287 P.jiroveci:326

G0MG27              	100.00%		L0P853              	100.00%
                    	       		L0P8M8              	56.32%
Bootstrap support for G0MG27 as seed ortholog is 100%.
Bootstrap support for L0P853 as seed ortholog is 100%.

Group of orthologs #105. Best score 583 bits
Score difference with first non-orthologous sequence - C.brenneri:8 P.jiroveci:203

G0NS60              	100.00%		L0PBH4              	100.00%
Bootstrap support for G0NS60 as seed ortholog is 61%.
Alternative seed ortholog is G0PLS9 (8 bits away from this cluster)
Bootstrap support for L0PBH4 as seed ortholog is 100%.

Group of orthologs #106. Best score 582 bits
Score difference with first non-orthologous sequence - C.brenneri:582 P.jiroveci:582

G0MPA1              	100.00%		L0PGR4              	100.00%
G0PJV3              	63.71%		L0PFQ2              	93.65%
Bootstrap support for G0MPA1 as seed ortholog is 100%.
Bootstrap support for L0PGR4 as seed ortholog is 100%.

Group of orthologs #107. Best score 579 bits
Score difference with first non-orthologous sequence - C.brenneri:579 P.jiroveci:579

G0NG18              	100.00%		L0PHB7              	100.00%
G0P914              	34.24%		
Bootstrap support for G0NG18 as seed ortholog is 100%.
Bootstrap support for L0PHB7 as seed ortholog is 100%.

Group of orthologs #108. Best score 571 bits
Score difference with first non-orthologous sequence - C.brenneri:571 P.jiroveci:571

G0P3M1              	100.00%		L0PEP7              	100.00%
G0P4A3              	97.31%		
Bootstrap support for G0P3M1 as seed ortholog is 100%.
Bootstrap support for L0PEP7 as seed ortholog is 100%.

Group of orthologs #109. Best score 570 bits
Score difference with first non-orthologous sequence - C.brenneri:520 P.jiroveci:570

G0NCM6              	100.00%		L0PGT9              	100.00%
Bootstrap support for G0NCM6 as seed ortholog is 100%.
Bootstrap support for L0PGT9 as seed ortholog is 100%.

Group of orthologs #110. Best score 569 bits
Score difference with first non-orthologous sequence - C.brenneri:569 P.jiroveci:569

G0NG65              	100.00%		L0PBN0              	100.00%
G0P248              	40.06%		
Bootstrap support for G0NG65 as seed ortholog is 100%.
Bootstrap support for L0PBN0 as seed ortholog is 100%.

Group of orthologs #111. Best score 566 bits
Score difference with first non-orthologous sequence - C.brenneri:566 P.jiroveci:566

G0MAU3              	100.00%		L0PB96              	100.00%
G0MLU9              	86.28%		
Bootstrap support for G0MAU3 as seed ortholog is 100%.
Bootstrap support for L0PB96 as seed ortholog is 100%.

Group of orthologs #112. Best score 566 bits
Score difference with first non-orthologous sequence - C.brenneri:425 P.jiroveci:566

G0P3Z5              	100.00%		L0PGS4              	100.00%
Bootstrap support for G0P3Z5 as seed ortholog is 100%.
Bootstrap support for L0PGS4 as seed ortholog is 100%.

Group of orthologs #113. Best score 564 bits
Score difference with first non-orthologous sequence - C.brenneri:113 P.jiroveci:58

G0NPZ1              	100.00%		L0PC64              	100.00%
G0MM07              	93.12%		
Bootstrap support for G0NPZ1 as seed ortholog is 99%.
Bootstrap support for L0PC64 as seed ortholog is 98%.

Group of orthologs #114. Best score 562 bits
Score difference with first non-orthologous sequence - C.brenneri:562 P.jiroveci:562

G0MES5              	100.00%		L0P9W2              	100.00%
Bootstrap support for G0MES5 as seed ortholog is 100%.
Bootstrap support for L0P9W2 as seed ortholog is 100%.

Group of orthologs #115. Best score 559 bits
Score difference with first non-orthologous sequence - C.brenneri:559 P.jiroveci:559

G0MNJ8              	100.00%		L0PBF3              	100.00%
Bootstrap support for G0MNJ8 as seed ortholog is 100%.
Bootstrap support for L0PBF3 as seed ortholog is 100%.

Group of orthologs #116. Best score 559 bits
Score difference with first non-orthologous sequence - C.brenneri:559 P.jiroveci:559

G0MSJ4              	100.00%		L0PE57              	100.00%
Bootstrap support for G0MSJ4 as seed ortholog is 100%.
Bootstrap support for L0PE57 as seed ortholog is 100%.

Group of orthologs #117. Best score 559 bits
Score difference with first non-orthologous sequence - C.brenneri:559 P.jiroveci:559

G0NYD9              	100.00%		L0PCV7              	100.00%
Bootstrap support for G0NYD9 as seed ortholog is 100%.
Bootstrap support for L0PCV7 as seed ortholog is 100%.

Group of orthologs #118. Best score 554 bits
Score difference with first non-orthologous sequence - C.brenneri:554 P.jiroveci:554

G0P3I9              	100.00%		L0PDI6              	100.00%
G0NWL4              	69.48%		
Bootstrap support for G0P3I9 as seed ortholog is 100%.
Bootstrap support for L0PDI6 as seed ortholog is 100%.

Group of orthologs #119. Best score 553 bits
Score difference with first non-orthologous sequence - C.brenneri:364 P.jiroveci:553

G0NSN8              	100.00%		L0PA75              	100.00%
G0NV05              	27.86%		
Bootstrap support for G0NSN8 as seed ortholog is 100%.
Bootstrap support for L0PA75 as seed ortholog is 100%.

Group of orthologs #120. Best score 552 bits
Score difference with first non-orthologous sequence - C.brenneri:74 P.jiroveci:8

G0NA97              	100.00%		L0P9J9              	100.00%
G0PE69              	99.40%		
Bootstrap support for G0NA97 as seed ortholog is 92%.
Bootstrap support for L0P9J9 as seed ortholog is 56%.
Alternative seed ortholog is L0PF72 (8 bits away from this cluster)

Group of orthologs #121. Best score 548 bits
Score difference with first non-orthologous sequence - C.brenneri:548 P.jiroveci:548

G0NZR3              	100.00%		L0P8P8              	100.00%
G0NFU3              	98.19%		
G0NCG6              	37.89%		
Bootstrap support for G0NZR3 as seed ortholog is 100%.
Bootstrap support for L0P8P8 as seed ortholog is 100%.

Group of orthologs #122. Best score 547 bits
Score difference with first non-orthologous sequence - C.brenneri:547 P.jiroveci:547

G0MFV5              	100.00%		L0PD31              	100.00%
G0PA58              	100.00%		
Bootstrap support for G0MFV5 as seed ortholog is 100%.
Bootstrap support for G0PA58 as seed ortholog is 100%.
Bootstrap support for L0PD31 as seed ortholog is 100%.

Group of orthologs #123. Best score 546 bits
Score difference with first non-orthologous sequence - C.brenneri:546 P.jiroveci:546

G0MG34              	100.00%		L0PES7              	100.00%
Bootstrap support for G0MG34 as seed ortholog is 100%.
Bootstrap support for L0PES7 as seed ortholog is 100%.

Group of orthologs #124. Best score 544 bits
Score difference with first non-orthologous sequence - C.brenneri:71 P.jiroveci:544

G0N8G3              	100.00%		L0PG37              	100.00%
Bootstrap support for G0N8G3 as seed ortholog is 95%.
Bootstrap support for L0PG37 as seed ortholog is 100%.

Group of orthologs #125. Best score 543 bits
Score difference with first non-orthologous sequence - C.brenneri:543 P.jiroveci:543

G0N3J6              	100.00%		L0PA45              	100.00%
Bootstrap support for G0N3J6 as seed ortholog is 100%.
Bootstrap support for L0PA45 as seed ortholog is 100%.

Group of orthologs #126. Best score 542 bits
Score difference with first non-orthologous sequence - C.brenneri:542 P.jiroveci:542

G0NDI1              	100.00%		L0P7T0              	100.00%
Bootstrap support for G0NDI1 as seed ortholog is 100%.
Bootstrap support for L0P7T0 as seed ortholog is 100%.

Group of orthologs #127. Best score 539 bits
Score difference with first non-orthologous sequence - C.brenneri:539 P.jiroveci:539

G0NUR4              	100.00%		L0PF68              	100.00%
G0PK32              	94.43%		
Bootstrap support for G0NUR4 as seed ortholog is 100%.
Bootstrap support for L0PF68 as seed ortholog is 100%.

Group of orthologs #128. Best score 539 bits
Score difference with first non-orthologous sequence - C.brenneri:361 P.jiroveci:539

G0N6W0              	100.00%		L0P7Y5              	100.00%
Bootstrap support for G0N6W0 as seed ortholog is 100%.
Bootstrap support for L0P7Y5 as seed ortholog is 100%.

Group of orthologs #129. Best score 537 bits
Score difference with first non-orthologous sequence - C.brenneri:537 P.jiroveci:537

G0MBZ7              	100.00%		L0P9D4              	100.00%
Bootstrap support for G0MBZ7 as seed ortholog is 100%.
Bootstrap support for L0P9D4 as seed ortholog is 100%.

Group of orthologs #130. Best score 537 bits
Score difference with first non-orthologous sequence - C.brenneri:537 P.jiroveci:537

G0MQE8              	100.00%		L0PA85              	100.00%
Bootstrap support for G0MQE8 as seed ortholog is 100%.
Bootstrap support for L0PA85 as seed ortholog is 100%.

Group of orthologs #131. Best score 536 bits
Score difference with first non-orthologous sequence - C.brenneri:232 P.jiroveci:536

G0P5L9              	100.00%		L0PC79              	100.00%
G0NUI5              	23.89%		
G0NB47              	19.11%		
Bootstrap support for G0P5L9 as seed ortholog is 99%.
Bootstrap support for L0PC79 as seed ortholog is 100%.

Group of orthologs #132. Best score 535 bits
Score difference with first non-orthologous sequence - C.brenneri:535 P.jiroveci:535

G0MKZ5              	100.00%		L0P8W6              	100.00%
Bootstrap support for G0MKZ5 as seed ortholog is 100%.
Bootstrap support for L0P8W6 as seed ortholog is 100%.

Group of orthologs #133. Best score 534 bits
Score difference with first non-orthologous sequence - C.brenneri:534 P.jiroveci:534

G0N1C2              	100.00%		L0PC65              	100.00%
Bootstrap support for G0N1C2 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #134. Best score 534 bits
Score difference with first non-orthologous sequence - C.brenneri:200 P.jiroveci:165

G0PNM7              	100.00%		L0P7D9              	100.00%
Bootstrap support for G0PNM7 as seed ortholog is 100%.
Bootstrap support for L0P7D9 as seed ortholog is 100%.

Group of orthologs #135. Best score 532 bits
Score difference with first non-orthologous sequence - C.brenneri:418 P.jiroveci:435

G0NU53              	100.00%		L0PCS2              	100.00%
G0PEV7              	99.78%		
Bootstrap support for G0NU53 as seed ortholog is 100%.
Bootstrap support for L0PCS2 as seed ortholog is 100%.

Group of orthologs #136. Best score 532 bits
Score difference with first non-orthologous sequence - C.brenneri:532 P.jiroveci:532

G0MKK8              	100.00%		L0PDR3              	100.00%
Bootstrap support for G0MKK8 as seed ortholog is 100%.
Bootstrap support for L0PDR3 as seed ortholog is 100%.

Group of orthologs #137. Best score 528 bits
Score difference with first non-orthologous sequence - C.brenneri:528 P.jiroveci:528

G0MLS6              	100.00%		L0PCX1              	100.00%
Bootstrap support for G0MLS6 as seed ortholog is 100%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #138. Best score 528 bits
Score difference with first non-orthologous sequence - C.brenneri:528 P.jiroveci:528

G0MVG8              	100.00%		L0PBJ1              	100.00%
Bootstrap support for G0MVG8 as seed ortholog is 100%.
Bootstrap support for L0PBJ1 as seed ortholog is 100%.

Group of orthologs #139. Best score 525 bits
Score difference with first non-orthologous sequence - C.brenneri:525 P.jiroveci:525

G0MEB9              	100.00%		L0PF80              	100.00%
Bootstrap support for G0MEB9 as seed ortholog is 100%.
Bootstrap support for L0PF80 as seed ortholog is 100%.

Group of orthologs #140. Best score 523 bits
Score difference with first non-orthologous sequence - C.brenneri:132 P.jiroveci:523

G0MLA0              	100.00%		L0P9A8              	100.00%
                    	       		L0PHB9              	100.00%
Bootstrap support for G0MLA0 as seed ortholog is 99%.
Bootstrap support for L0P9A8 as seed ortholog is 100%.
Bootstrap support for L0PHB9 as seed ortholog is 100%.

Group of orthologs #141. Best score 519 bits
Score difference with first non-orthologous sequence - C.brenneri:519 P.jiroveci:519

G0PIU3              	100.00%		L0PCP1              	100.00%
G0NAK7              	97.48%		
Bootstrap support for G0PIU3 as seed ortholog is 100%.
Bootstrap support for L0PCP1 as seed ortholog is 100%.

Group of orthologs #142. Best score 517 bits
Score difference with first non-orthologous sequence - C.brenneri:380 P.jiroveci:368

G0MW68              	100.00%		L0PIF0              	100.00%
G0PFJ7              	7.92%		
Bootstrap support for G0MW68 as seed ortholog is 100%.
Bootstrap support for L0PIF0 as seed ortholog is 100%.

Group of orthologs #143. Best score 517 bits
Score difference with first non-orthologous sequence - C.brenneri:517 P.jiroveci:517

G0MZF7              	100.00%		L0PBW3              	100.00%
Bootstrap support for G0MZF7 as seed ortholog is 100%.
Bootstrap support for L0PBW3 as seed ortholog is 100%.

Group of orthologs #144. Best score 517 bits
Score difference with first non-orthologous sequence - C.brenneri:517 P.jiroveci:517

G0NWM9              	100.00%		L0PEL0              	100.00%
Bootstrap support for G0NWM9 as seed ortholog is 100%.
Bootstrap support for L0PEL0 as seed ortholog is 100%.

Group of orthologs #145. Best score 514 bits
Score difference with first non-orthologous sequence - C.brenneri:514 P.jiroveci:514

G0MTG4              	100.00%		L0PG07              	100.00%
Bootstrap support for G0MTG4 as seed ortholog is 100%.
Bootstrap support for L0PG07 as seed ortholog is 100%.

Group of orthologs #146. Best score 512 bits
Score difference with first non-orthologous sequence - C.brenneri:512 P.jiroveci:512

G0MKB3              	100.00%		L0P6X8              	100.00%
Bootstrap support for G0MKB3 as seed ortholog is 100%.
Bootstrap support for L0P6X8 as seed ortholog is 100%.

Group of orthologs #147. Best score 511 bits
Score difference with first non-orthologous sequence - C.brenneri:383 P.jiroveci:430

G0PH59              	100.00%		L0P802              	100.00%
G0NXX7              	54.50%		
G0MAD5              	32.62%		
Bootstrap support for G0PH59 as seed ortholog is 100%.
Bootstrap support for L0P802 as seed ortholog is 100%.

Group of orthologs #148. Best score 510 bits
Score difference with first non-orthologous sequence - C.brenneri:275 P.jiroveci:510

G0N0B8              	100.00%		L0P905              	100.00%
G0MHZ4              	75.48%		
G0N0U8              	34.09%		
G0N0U9              	33.09%		
G0PF64              	31.52%		
G0NJC7              	30.80%		
G0M9L6              	27.66%		
G0N641              	19.70%		
G0NSA5              	19.55%		
G0P3C9              	14.80%		
G0NSN5              	7.65%		
G0NPA1              	7.00%		
G0NSN2              	6.31%		
Bootstrap support for G0N0B8 as seed ortholog is 99%.
Bootstrap support for L0P905 as seed ortholog is 100%.

Group of orthologs #149. Best score 509 bits
Score difference with first non-orthologous sequence - C.brenneri:509 P.jiroveci:509

G0NP10              	100.00%		L0P917              	100.00%
G0PK47              	23.12%		L0PF20              	87.03%
Bootstrap support for G0NP10 as seed ortholog is 100%.
Bootstrap support for L0P917 as seed ortholog is 100%.

Group of orthologs #150. Best score 508 bits
Score difference with first non-orthologous sequence - C.brenneri:176 P.jiroveci:151

G0MSV6              	100.00%		L0P6T3              	100.00%
G0MNU5              	27.70%		
Bootstrap support for G0MSV6 as seed ortholog is 99%.
Bootstrap support for L0P6T3 as seed ortholog is 99%.

Group of orthologs #151. Best score 508 bits
Score difference with first non-orthologous sequence - C.brenneri:236 P.jiroveci:184

G0NGP1              	100.00%		L0PEK2              	100.00%
Bootstrap support for G0NGP1 as seed ortholog is 99%.
Bootstrap support for L0PEK2 as seed ortholog is 99%.

Group of orthologs #152. Best score 502 bits
Score difference with first non-orthologous sequence - C.brenneri:502 P.jiroveci:502

G0NWW0              	100.00%		L0P7R6              	100.00%
G0PEK9              	100.00%		L0PHF8              	84.82%
Bootstrap support for G0NWW0 as seed ortholog is 100%.
Bootstrap support for G0PEK9 as seed ortholog is 100%.
Bootstrap support for L0P7R6 as seed ortholog is 100%.

Group of orthologs #153. Best score 502 bits
Score difference with first non-orthologous sequence - C.brenneri:344 P.jiroveci:502

G0MKM1              	100.00%		L0P9I8              	100.00%
Bootstrap support for G0MKM1 as seed ortholog is 100%.
Bootstrap support for L0P9I8 as seed ortholog is 100%.

Group of orthologs #154. Best score 502 bits
Score difference with first non-orthologous sequence - C.brenneri:170 P.jiroveci:329

G0MKL5              	100.00%		L0PDY0              	100.00%
Bootstrap support for G0MKL5 as seed ortholog is 99%.
Bootstrap support for L0PDY0 as seed ortholog is 100%.

Group of orthologs #155. Best score 501 bits
Score difference with first non-orthologous sequence - C.brenneri:501 P.jiroveci:501

G0NVY1              	100.00%		L0PBR9              	100.00%
G0NA59              	99.36%		
G0MYF0              	50.48%		
Bootstrap support for G0NVY1 as seed ortholog is 100%.
Bootstrap support for L0PBR9 as seed ortholog is 100%.

Group of orthologs #156. Best score 499 bits
Score difference with first non-orthologous sequence - C.brenneri:499 P.jiroveci:499

G0MLA2              	100.00%		L0PG27              	100.00%
Bootstrap support for G0MLA2 as seed ortholog is 100%.
Bootstrap support for L0PG27 as seed ortholog is 100%.

Group of orthologs #157. Best score 498 bits
Score difference with first non-orthologous sequence - C.brenneri:498 P.jiroveci:498

G0N2Q7              	100.00%		L0PCC4              	100.00%
Bootstrap support for G0N2Q7 as seed ortholog is 100%.
Bootstrap support for L0PCC4 as seed ortholog is 100%.

Group of orthologs #158. Best score 498 bits
Score difference with first non-orthologous sequence - C.brenneri:324 P.jiroveci:498

G0NH83              	100.00%		L0P6Y2              	100.00%
Bootstrap support for G0NH83 as seed ortholog is 100%.
Bootstrap support for L0P6Y2 as seed ortholog is 100%.

Group of orthologs #159. Best score 497 bits
Score difference with first non-orthologous sequence - C.brenneri:406 P.jiroveci:497

G0MPQ0              	100.00%		L0PB97              	100.00%
Bootstrap support for G0MPQ0 as seed ortholog is 100%.
Bootstrap support for L0PB97 as seed ortholog is 100%.

Group of orthologs #160. Best score 495 bits
Score difference with first non-orthologous sequence - C.brenneri:495 P.jiroveci:446

G0MK37              	100.00%		L0P7R1              	100.00%
Bootstrap support for G0MK37 as seed ortholog is 100%.
Bootstrap support for L0P7R1 as seed ortholog is 100%.

Group of orthologs #161. Best score 491 bits
Score difference with first non-orthologous sequence - C.brenneri:317 P.jiroveci:277

G0NS01              	100.00%		L0PF08              	100.00%
Bootstrap support for G0NS01 as seed ortholog is 100%.
Bootstrap support for L0PF08 as seed ortholog is 100%.

Group of orthologs #162. Best score 489 bits
Score difference with first non-orthologous sequence - C.brenneri:147 P.jiroveci:489

G0MKU3              	100.00%		L0PBN5              	100.00%
G0P035              	36.22%		
Bootstrap support for G0MKU3 as seed ortholog is 99%.
Bootstrap support for L0PBN5 as seed ortholog is 100%.

Group of orthologs #163. Best score 487 bits
Score difference with first non-orthologous sequence - C.brenneri:119 P.jiroveci:158

G0NM59              	100.00%		L0PCK5              	100.00%
G0PM62              	100.00%		
G0NVQ3              	17.67%		
Bootstrap support for G0NM59 as seed ortholog is 99%.
Bootstrap support for G0PM62 as seed ortholog is 99%.
Bootstrap support for L0PCK5 as seed ortholog is 100%.

Group of orthologs #164. Best score 484 bits
Score difference with first non-orthologous sequence - C.brenneri:361 P.jiroveci:365

G0NH82              	100.00%		L0PE30              	100.00%
G0NVF9              	93.00%		
Bootstrap support for G0NH82 as seed ortholog is 100%.
Bootstrap support for L0PE30 as seed ortholog is 100%.

Group of orthologs #165. Best score 471 bits
Score difference with first non-orthologous sequence - C.brenneri:471 P.jiroveci:471

G0MPT7              	100.00%		L0PFZ9              	100.00%
G0PCC6              	99.42%		
Bootstrap support for G0MPT7 as seed ortholog is 100%.
Bootstrap support for L0PFZ9 as seed ortholog is 100%.

Group of orthologs #166. Best score 471 bits
Score difference with first non-orthologous sequence - C.brenneri:397 P.jiroveci:405

G0N8B0              	100.00%		L0PDG5              	100.00%
G0N8B3              	100.00%		
Bootstrap support for G0N8B0 as seed ortholog is 100%.
Bootstrap support for G0N8B3 as seed ortholog is 100%.
Bootstrap support for L0PDG5 as seed ortholog is 100%.

Group of orthologs #167. Best score 466 bits
Score difference with first non-orthologous sequence - C.brenneri:328 P.jiroveci:382

G0P4U9              	100.00%		L0PG55              	100.00%
Bootstrap support for G0P4U9 as seed ortholog is 100%.
Bootstrap support for L0PG55 as seed ortholog is 100%.

Group of orthologs #168. Best score 462 bits
Score difference with first non-orthologous sequence - C.brenneri:462 P.jiroveci:363

G0MCJ4              	100.00%		L0PDC9              	100.00%
Bootstrap support for G0MCJ4 as seed ortholog is 100%.
Bootstrap support for L0PDC9 as seed ortholog is 100%.

Group of orthologs #169. Best score 461 bits
Score difference with first non-orthologous sequence - C.brenneri:275 P.jiroveci:461

G0NRK3              	100.00%		L0P8R6              	100.00%
Bootstrap support for G0NRK3 as seed ortholog is 100%.
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #170. Best score 458 bits
Score difference with first non-orthologous sequence - C.brenneri:458 P.jiroveci:458

G0NFU5              	100.00%		L0PDU2              	100.00%
G0NZR1              	91.10%		
Bootstrap support for G0NFU5 as seed ortholog is 100%.
Bootstrap support for L0PDU2 as seed ortholog is 100%.

Group of orthologs #171. Best score 458 bits
Score difference with first non-orthologous sequence - C.brenneri:344 P.jiroveci:458

G0N8I8              	100.00%		L0P7N1              	100.00%
Bootstrap support for G0N8I8 as seed ortholog is 100%.
Bootstrap support for L0P7N1 as seed ortholog is 100%.

Group of orthologs #172. Best score 454 bits
Score difference with first non-orthologous sequence - C.brenneri:259 P.jiroveci:21

G0NP00              	100.00%		L0PAI4              	100.00%
G0PFG4              	63.99%		
Bootstrap support for G0NP00 as seed ortholog is 100%.
Bootstrap support for L0PAI4 as seed ortholog is 65%.
Alternative seed ortholog is L0PEY0 (21 bits away from this cluster)

Group of orthologs #173. Best score 454 bits
Score difference with first non-orthologous sequence - C.brenneri:227 P.jiroveci:231

G0M7R4              	100.00%		L0PB67              	100.00%
Bootstrap support for G0M7R4 as seed ortholog is 100%.
Bootstrap support for L0PB67 as seed ortholog is 100%.

Group of orthologs #174. Best score 453 bits
Score difference with first non-orthologous sequence - C.brenneri:328 P.jiroveci:347

G0N4U2              	100.00%		L0P8C2              	100.00%
Bootstrap support for G0N4U2 as seed ortholog is 100%.
Bootstrap support for L0P8C2 as seed ortholog is 100%.

Group of orthologs #175. Best score 452 bits
Score difference with first non-orthologous sequence - C.brenneri:390 P.jiroveci:452

G0MF27              	100.00%		L0P992              	100.00%
G0MF26              	7.43%		
G0P8N5              	6.00%		
Bootstrap support for G0MF27 as seed ortholog is 100%.
Bootstrap support for L0P992 as seed ortholog is 100%.

Group of orthologs #176. Best score 451 bits
Score difference with first non-orthologous sequence - C.brenneri:451 P.jiroveci:451

G0MFB2              	100.00%		L0P8F1              	100.00%
G0P7R1              	100.00%		
Bootstrap support for G0MFB2 as seed ortholog is 100%.
Bootstrap support for G0P7R1 as seed ortholog is 100%.
Bootstrap support for L0P8F1 as seed ortholog is 100%.

Group of orthologs #177. Best score 451 bits
Score difference with first non-orthologous sequence - C.brenneri:121 P.jiroveci:451

G0NIY6              	100.00%		L0PAA4              	100.00%
G0MRK8              	5.38%		
Bootstrap support for G0NIY6 as seed ortholog is 99%.
Bootstrap support for L0PAA4 as seed ortholog is 100%.

Group of orthologs #178. Best score 451 bits
Score difference with first non-orthologous sequence - C.brenneri:184 P.jiroveci:392

G0P3Z4              	100.00%		L0PCT0              	100.00%
Bootstrap support for G0P3Z4 as seed ortholog is 99%.
Bootstrap support for L0PCT0 as seed ortholog is 100%.

Group of orthologs #179. Best score 450 bits
Score difference with first non-orthologous sequence - C.brenneri:139 P.jiroveci:59

G0N620              	100.00%		L0PFW2              	100.00%
G0N619              	32.11%		
Bootstrap support for G0N620 as seed ortholog is 99%.
Bootstrap support for L0PFW2 as seed ortholog is 94%.

Group of orthologs #180. Best score 450 bits
Score difference with first non-orthologous sequence - C.brenneri:321 P.jiroveci:450

G0MCI1              	100.00%		L0PGH3              	100.00%
Bootstrap support for G0MCI1 as seed ortholog is 100%.
Bootstrap support for L0PGH3 as seed ortholog is 100%.

Group of orthologs #181. Best score 449 bits
Score difference with first non-orthologous sequence - C.brenneri:449 P.jiroveci:449

G0N8B1              	100.00%		L0PFQ5              	100.00%
G0N8B5              	99.08%		
Bootstrap support for G0N8B1 as seed ortholog is 100%.
Bootstrap support for L0PFQ5 as seed ortholog is 100%.

Group of orthologs #182. Best score 449 bits
Score difference with first non-orthologous sequence - C.brenneri:449 P.jiroveci:449

G0NLI4              	100.00%		L0PCS3              	100.00%
G0NPX3              	41.18%		
Bootstrap support for G0NLI4 as seed ortholog is 100%.
Bootstrap support for L0PCS3 as seed ortholog is 100%.

Group of orthologs #183. Best score 449 bits
Score difference with first non-orthologous sequence - C.brenneri:196 P.jiroveci:187

G0N8Z2              	100.00%		L0PC38              	100.00%
Bootstrap support for G0N8Z2 as seed ortholog is 100%.
Bootstrap support for L0PC38 as seed ortholog is 100%.

Group of orthologs #184. Best score 449 bits
Score difference with first non-orthologous sequence - C.brenneri:449 P.jiroveci:449

G0NDU8              	100.00%		L0PED9              	100.00%
Bootstrap support for G0NDU8 as seed ortholog is 100%.
Bootstrap support for L0PED9 as seed ortholog is 100%.

Group of orthologs #185. Best score 447 bits
Score difference with first non-orthologous sequence - C.brenneri:447 P.jiroveci:447

G0MZI9              	100.00%		L0PA41              	100.00%
G0PGI6              	90.64%		
Bootstrap support for G0MZI9 as seed ortholog is 100%.
Bootstrap support for L0PA41 as seed ortholog is 100%.

Group of orthologs #186. Best score 447 bits
Score difference with first non-orthologous sequence - C.brenneri:447 P.jiroveci:447

G0NBM9              	100.00%		L0PDM3              	100.00%
G0PLP6              	98.58%		
Bootstrap support for G0NBM9 as seed ortholog is 100%.
Bootstrap support for L0PDM3 as seed ortholog is 100%.

Group of orthologs #187. Best score 447 bits
Score difference with first non-orthologous sequence - C.brenneri:447 P.jiroveci:447

G0NK31              	100.00%		L0PER3              	100.00%
Bootstrap support for G0NK31 as seed ortholog is 100%.
Bootstrap support for L0PER3 as seed ortholog is 100%.

Group of orthologs #188. Best score 446 bits
Score difference with first non-orthologous sequence - C.brenneri:246 P.jiroveci:126

G0MKU0              	100.00%		L0P718              	100.00%
Bootstrap support for G0MKU0 as seed ortholog is 100%.
Bootstrap support for L0P718 as seed ortholog is 99%.

Group of orthologs #189. Best score 446 bits
Score difference with first non-orthologous sequence - C.brenneri:446 P.jiroveci:308

G0MLY2              	100.00%		L0PDG3              	100.00%
Bootstrap support for G0MLY2 as seed ortholog is 100%.
Bootstrap support for L0PDG3 as seed ortholog is 100%.

Group of orthologs #190. Best score 443 bits
Score difference with first non-orthologous sequence - C.brenneri:443 P.jiroveci:443

G0MX39              	100.00%		L0PD69              	100.00%
G0MXJ8              	43.96%		
G0PHA3              	43.58%		
Bootstrap support for G0MX39 as seed ortholog is 100%.
Bootstrap support for L0PD69 as seed ortholog is 100%.

Group of orthologs #191. Best score 443 bits
Score difference with first non-orthologous sequence - C.brenneri:354 P.jiroveci:443

G0N4U1              	100.00%		L0P921              	100.00%
Bootstrap support for G0N4U1 as seed ortholog is 100%.
Bootstrap support for L0P921 as seed ortholog is 100%.

Group of orthologs #192. Best score 442 bits
Score difference with first non-orthologous sequence - C.brenneri:42 P.jiroveci:442

G0MAY4              	100.00%		L0P890              	100.00%
Bootstrap support for G0MAY4 as seed ortholog is 81%.
Bootstrap support for L0P890 as seed ortholog is 100%.

Group of orthologs #193. Best score 440 bits
Score difference with first non-orthologous sequence - C.brenneri:440 P.jiroveci:440

G0MFV3              	100.00%		L0PB35              	100.00%
Bootstrap support for G0MFV3 as seed ortholog is 100%.
Bootstrap support for L0PB35 as seed ortholog is 100%.

Group of orthologs #194. Best score 438 bits
Score difference with first non-orthologous sequence - C.brenneri:344 P.jiroveci:438

G0MR16              	100.00%		L0PB50              	100.00%
Bootstrap support for G0MR16 as seed ortholog is 100%.
Bootstrap support for L0PB50 as seed ortholog is 100%.

Group of orthologs #195. Best score 438 bits
Score difference with first non-orthologous sequence - C.brenneri:438 P.jiroveci:385

G0NDN8              	100.00%		L0PBU6              	100.00%
Bootstrap support for G0NDN8 as seed ortholog is 100%.
Bootstrap support for L0PBU6 as seed ortholog is 100%.

Group of orthologs #196. Best score 435 bits
Score difference with first non-orthologous sequence - C.brenneri:435 P.jiroveci:435

G0N8I9              	100.00%		L0PAX4              	100.00%
Bootstrap support for G0N8I9 as seed ortholog is 100%.
Bootstrap support for L0PAX4 as seed ortholog is 100%.

Group of orthologs #197. Best score 435 bits
Score difference with first non-orthologous sequence - C.brenneri:327 P.jiroveci:435

G0NC06              	100.00%		L0PET9              	100.00%
Bootstrap support for G0NC06 as seed ortholog is 100%.
Bootstrap support for L0PET9 as seed ortholog is 100%.

Group of orthologs #198. Best score 435 bits
Score difference with first non-orthologous sequence - C.brenneri:435 P.jiroveci:435

G0NRA9              	100.00%		L0P9F0              	100.00%
Bootstrap support for G0NRA9 as seed ortholog is 100%.
Bootstrap support for L0P9F0 as seed ortholog is 100%.

Group of orthologs #199. Best score 434 bits
Score difference with first non-orthologous sequence - C.brenneri:87 P.jiroveci:434

G0MGV8              	100.00%		L0P9H5              	100.00%
G0NGV5              	15.17%		L0P8S4              	54.12%
G0P7F0              	7.63%		
G0P9H6              	7.63%		
Bootstrap support for G0MGV8 as seed ortholog is 96%.
Bootstrap support for L0P9H5 as seed ortholog is 100%.

Group of orthologs #200. Best score 434 bits
Score difference with first non-orthologous sequence - C.brenneri:139 P.jiroveci:230

G0MIP9              	100.00%		L0P8L4              	100.00%
G0P899              	21.11%		
Bootstrap support for G0MIP9 as seed ortholog is 96%.
Bootstrap support for L0P8L4 as seed ortholog is 99%.

Group of orthologs #201. Best score 434 bits
Score difference with first non-orthologous sequence - C.brenneri:434 P.jiroveci:434

G0PMS0              	100.00%		L0PC44              	100.00%
G0PNM8              	80.79%		
Bootstrap support for G0PMS0 as seed ortholog is 100%.
Bootstrap support for L0PC44 as seed ortholog is 100%.

Group of orthologs #202. Best score 432 bits
Score difference with first non-orthologous sequence - C.brenneri:145 P.jiroveci:432

G0ML49              	100.00%		L0P9C8              	100.00%
Bootstrap support for G0ML49 as seed ortholog is 99%.
Bootstrap support for L0P9C8 as seed ortholog is 100%.

Group of orthologs #203. Best score 429 bits
Score difference with first non-orthologous sequence - C.brenneri:287 P.jiroveci:429

G0NFI2              	100.00%		L0P8N1              	100.00%
Bootstrap support for G0NFI2 as seed ortholog is 100%.
Bootstrap support for L0P8N1 as seed ortholog is 100%.

Group of orthologs #204. Best score 427 bits
Score difference with first non-orthologous sequence - C.brenneri:427 P.jiroveci:427

G0MR59              	100.00%		L0PI13              	100.00%
G0MT03              	19.38%		
G0MQ69              	12.40%		
G0P9B4              	12.40%		
G0MRI2              	11.89%		
Bootstrap support for G0MR59 as seed ortholog is 100%.
Bootstrap support for L0PI13 as seed ortholog is 100%.

Group of orthologs #205. Best score 426 bits
Score difference with first non-orthologous sequence - C.brenneri:183 P.jiroveci:426

G0NNB2              	100.00%		L0PGN1              	100.00%
G0PCA9              	6.81%		
G0PG10              	6.59%		
Bootstrap support for G0NNB2 as seed ortholog is 99%.
Bootstrap support for L0PGN1 as seed ortholog is 100%.

Group of orthologs #206. Best score 421 bits
Score difference with first non-orthologous sequence - C.brenneri:312 P.jiroveci:338

G0MHF1              	100.00%		L0PFB1              	100.00%
G0MGH2              	11.10%		
Bootstrap support for G0MHF1 as seed ortholog is 100%.
Bootstrap support for L0PFB1 as seed ortholog is 100%.

Group of orthologs #207. Best score 415 bits
Score difference with first non-orthologous sequence - C.brenneri:67 P.jiroveci:415

G0N649              	100.00%		L0P9G2              	100.00%
G0NSB2              	100.00%		
Bootstrap support for G0N649 as seed ortholog is 96%.
Bootstrap support for G0NSB2 as seed ortholog is 96%.
Bootstrap support for L0P9G2 as seed ortholog is 100%.

Group of orthologs #208. Best score 414 bits
Score difference with first non-orthologous sequence - C.brenneri:414 P.jiroveci:414

G0MLE0              	100.00%		L0P958              	100.00%
Bootstrap support for G0MLE0 as seed ortholog is 100%.
Bootstrap support for L0P958 as seed ortholog is 100%.

Group of orthologs #209. Best score 413 bits
Score difference with first non-orthologous sequence - C.brenneri:413 P.jiroveci:413

G0MZ16              	100.00%		L0P9J7              	100.00%
G0PP26              	23.19%		
Bootstrap support for G0MZ16 as seed ortholog is 100%.
Bootstrap support for L0P9J7 as seed ortholog is 100%.

Group of orthologs #210. Best score 411 bits
Score difference with first non-orthologous sequence - C.brenneri:411 P.jiroveci:411

G0PBA2              	100.00%		L0PEE3              	100.00%
G0MM03              	95.49%		
G0P6U7              	20.60%		
G0NRR9              	15.50%		
Bootstrap support for G0PBA2 as seed ortholog is 100%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #211. Best score 411 bits
Score difference with first non-orthologous sequence - C.brenneri:411 P.jiroveci:411

G0PJG2              	100.00%		L0PH85              	100.00%
G0NHA6              	81.37%		
G0NXW0              	56.04%		
Bootstrap support for G0PJG2 as seed ortholog is 100%.
Bootstrap support for L0PH85 as seed ortholog is 100%.

Group of orthologs #212. Best score 410 bits
Score difference with first non-orthologous sequence - C.brenneri:410 P.jiroveci:295

G0NME5              	100.00%		L0PBW7              	100.00%
G0P5H9              	99.42%		
Bootstrap support for G0NME5 as seed ortholog is 100%.
Bootstrap support for L0PBW7 as seed ortholog is 100%.

Group of orthologs #213. Best score 410 bits
Score difference with first non-orthologous sequence - C.brenneri:93 P.jiroveci:352

G0NRU1              	100.00%		L0PBW1              	100.00%
G0PNS1              	90.00%		
Bootstrap support for G0NRU1 as seed ortholog is 98%.
Bootstrap support for L0PBW1 as seed ortholog is 100%.

Group of orthologs #214. Best score 410 bits
Score difference with first non-orthologous sequence - C.brenneri:348 P.jiroveci:410

G0N375              	100.00%		L0PG05              	100.00%
Bootstrap support for G0N375 as seed ortholog is 100%.
Bootstrap support for L0PG05 as seed ortholog is 100%.

Group of orthologs #215. Best score 409 bits
Score difference with first non-orthologous sequence - C.brenneri:192 P.jiroveci:409

G0MZT1              	100.00%		L0P6W8              	100.00%
                    	       		L0PH46              	100.00%
Bootstrap support for G0MZT1 as seed ortholog is 100%.
Bootstrap support for L0P6W8 as seed ortholog is 100%.
Bootstrap support for L0PH46 as seed ortholog is 100%.

Group of orthologs #216. Best score 406 bits
Score difference with first non-orthologous sequence - C.brenneri:406 P.jiroveci:406

G0NM66              	100.00%		L0P7D2              	100.00%
G0PLW6              	100.00%		
G0MKN6              	25.45%		
Bootstrap support for G0NM66 as seed ortholog is 100%.
Bootstrap support for G0PLW6 as seed ortholog is 100%.
Bootstrap support for L0P7D2 as seed ortholog is 100%.

Group of orthologs #217. Best score 406 bits
Score difference with first non-orthologous sequence - C.brenneri:406 P.jiroveci:406

G0P6R5              	100.00%		L0PG48              	100.00%
Bootstrap support for G0P6R5 as seed ortholog is 100%.
Bootstrap support for L0PG48 as seed ortholog is 100%.

Group of orthologs #218. Best score 405 bits
Score difference with first non-orthologous sequence - C.brenneri:405 P.jiroveci:292

G0M7Y9              	100.00%		L0P7M4              	100.00%
G0MF43              	95.48%		L0PH62              	51.01%
G0P8J2              	94.26%		
G0MF47              	76.87%		
Bootstrap support for G0M7Y9 as seed ortholog is 100%.
Bootstrap support for L0P7M4 as seed ortholog is 100%.

Group of orthologs #219. Best score 405 bits
Score difference with first non-orthologous sequence - C.brenneri:41 P.jiroveci:215

G0NP42              	100.00%		L0PAW8              	100.00%
Bootstrap support for G0NP42 as seed ortholog is 74%.
Alternative seed ortholog is G0NLL8 (41 bits away from this cluster)
Bootstrap support for L0PAW8 as seed ortholog is 99%.

Group of orthologs #220. Best score 404 bits
Score difference with first non-orthologous sequence - C.brenneri:127 P.jiroveci:225

G0MVT8              	100.00%		L0PBL6              	100.00%
Bootstrap support for G0MVT8 as seed ortholog is 65%.
Alternative seed ortholog is G0NUG1 (127 bits away from this cluster)
Bootstrap support for L0PBL6 as seed ortholog is 31%.
Alternative seed ortholog is L0PGL8 (225 bits away from this cluster)

Group of orthologs #221. Best score 403 bits
Score difference with first non-orthologous sequence - C.brenneri:123 P.jiroveci:403

G0MKT3              	100.00%		L0PE41              	100.00%
G0MKT2              	45.80%		
Bootstrap support for G0MKT3 as seed ortholog is 97%.
Bootstrap support for L0PE41 as seed ortholog is 100%.

Group of orthologs #222. Best score 401 bits
Score difference with first non-orthologous sequence - C.brenneri:128 P.jiroveci:401

G0NK77              	100.00%		L0PB68              	100.00%
G0PGV1              	98.43%		
Bootstrap support for G0NK77 as seed ortholog is 100%.
Bootstrap support for L0PB68 as seed ortholog is 100%.

Group of orthologs #223. Best score 401 bits
Score difference with first non-orthologous sequence - C.brenneri:110 P.jiroveci:198

G0NQ33              	100.00%		L0P8E8              	100.00%
                    	       		L0PEB0              	100.00%
Bootstrap support for G0NQ33 as seed ortholog is 98%.
Bootstrap support for L0P8E8 as seed ortholog is 99%.
Bootstrap support for L0PEB0 as seed ortholog is 99%.

Group of orthologs #224. Best score 400 bits
Score difference with first non-orthologous sequence - C.brenneri:400 P.jiroveci:400

G0NYG1              	100.00%		L0PAS3              	100.00%
G0PNF8              	76.24%		
Bootstrap support for G0NYG1 as seed ortholog is 100%.
Bootstrap support for L0PAS3 as seed ortholog is 100%.

Group of orthologs #225. Best score 397 bits
Score difference with first non-orthologous sequence - C.brenneri:397 P.jiroveci:397

G0N0X1              	100.00%		L0P9G7              	100.00%
G0MMU3              	51.06%		
Bootstrap support for G0N0X1 as seed ortholog is 100%.
Bootstrap support for L0P9G7 as seed ortholog is 100%.

Group of orthologs #226. Best score 396 bits
Score difference with first non-orthologous sequence - C.brenneri:174 P.jiroveci:396

G0NBD1              	100.00%		L0PCE9              	100.00%
G0PEE0              	100.00%		
Bootstrap support for G0NBD1 as seed ortholog is 99%.
Bootstrap support for G0PEE0 as seed ortholog is 99%.
Bootstrap support for L0PCE9 as seed ortholog is 100%.

Group of orthologs #227. Best score 396 bits
Score difference with first non-orthologous sequence - C.brenneri:101 P.jiroveci:396

G0NC00              	100.00%		L0PCN1              	100.00%
Bootstrap support for G0NC00 as seed ortholog is 99%.
Bootstrap support for L0PCN1 as seed ortholog is 100%.

Group of orthologs #228. Best score 395 bits
Score difference with first non-orthologous sequence - C.brenneri:96 P.jiroveci:170

G0MCI0              	100.00%		L0P6U6              	100.00%
Bootstrap support for G0MCI0 as seed ortholog is 97%.
Bootstrap support for L0P6U6 as seed ortholog is 99%.

Group of orthologs #229. Best score 395 bits
Score difference with first non-orthologous sequence - C.brenneri:395 P.jiroveci:395

G0MZD0              	100.00%		L0PFC2              	100.00%
Bootstrap support for G0MZD0 as seed ortholog is 100%.
Bootstrap support for L0PFC2 as seed ortholog is 100%.

Group of orthologs #230. Best score 394 bits
Score difference with first non-orthologous sequence - C.brenneri:394 P.jiroveci:90

G0NFX4              	100.00%		L0PDH7              	100.00%
G0PJB3              	100.00%		
Bootstrap support for G0NFX4 as seed ortholog is 100%.
Bootstrap support for G0PJB3 as seed ortholog is 100%.
Bootstrap support for L0PDH7 as seed ortholog is 99%.

Group of orthologs #231. Best score 394 bits
Score difference with first non-orthologous sequence - C.brenneri:159 P.jiroveci:394

G0MDY0              	100.00%		L0PBI1              	100.00%
Bootstrap support for G0MDY0 as seed ortholog is 99%.
Bootstrap support for L0PBI1 as seed ortholog is 100%.

Group of orthologs #232. Best score 393 bits
Score difference with first non-orthologous sequence - C.brenneri:393 P.jiroveci:393

G0MB69              	100.00%		L0PGA8              	100.00%
G0MYT7              	38.00%		
Bootstrap support for G0MB69 as seed ortholog is 100%.
Bootstrap support for L0PGA8 as seed ortholog is 100%.

Group of orthologs #233. Best score 392 bits
Score difference with first non-orthologous sequence - C.brenneri:258 P.jiroveci:293

G0N5T1              	100.00%		L0PDA0              	100.00%
G0N8S0              	5.79%		
Bootstrap support for G0N5T1 as seed ortholog is 100%.
Bootstrap support for L0PDA0 as seed ortholog is 100%.

Group of orthologs #234. Best score 392 bits
Score difference with first non-orthologous sequence - C.brenneri:289 P.jiroveci:392

G0MDY8              	100.00%		L0PBG8              	100.00%
Bootstrap support for G0MDY8 as seed ortholog is 100%.
Bootstrap support for L0PBG8 as seed ortholog is 100%.

Group of orthologs #235. Best score 391 bits
Score difference with first non-orthologous sequence - C.brenneri:391 P.jiroveci:391

G0NU66              	100.00%		L0P9V7              	100.00%
G0NYN9              	48.62%		
G0PCM5              	47.15%		
G0NA71              	42.67%		
G0P947              	41.89%		
Bootstrap support for G0NU66 as seed ortholog is 100%.
Bootstrap support for L0P9V7 as seed ortholog is 100%.

Group of orthologs #236. Best score 391 bits
Score difference with first non-orthologous sequence - C.brenneri:391 P.jiroveci:391

G0MEE4              	100.00%		L0PAP1              	100.00%
Bootstrap support for G0MEE4 as seed ortholog is 100%.
Bootstrap support for L0PAP1 as seed ortholog is 100%.

Group of orthologs #237. Best score 390 bits
Score difference with first non-orthologous sequence - C.brenneri:390 P.jiroveci:390

G0MG67              	100.00%		L0P9I4              	100.00%
Bootstrap support for G0MG67 as seed ortholog is 100%.
Bootstrap support for L0P9I4 as seed ortholog is 100%.

Group of orthologs #238. Best score 389 bits
Score difference with first non-orthologous sequence - C.brenneri:230 P.jiroveci:312

G0NWM7              	100.00%		L0PFE7              	100.00%
G0P3H6              	69.13%		
Bootstrap support for G0NWM7 as seed ortholog is 100%.
Bootstrap support for L0PFE7 as seed ortholog is 100%.

Group of orthologs #239. Best score 389 bits
Score difference with first non-orthologous sequence - C.brenneri:267 P.jiroveci:276

G0P4Z6              	100.00%		L0PCD8              	100.00%
Bootstrap support for G0P4Z6 as seed ortholog is 100%.
Bootstrap support for L0PCD8 as seed ortholog is 99%.

Group of orthologs #240. Best score 387 bits
Score difference with first non-orthologous sequence - C.brenneri:227 P.jiroveci:387

G0M832              	100.00%		L0PA15              	100.00%
Bootstrap support for G0M832 as seed ortholog is 100%.
Bootstrap support for L0PA15 as seed ortholog is 100%.

Group of orthologs #241. Best score 387 bits
Score difference with first non-orthologous sequence - C.brenneri:102 P.jiroveci:24

G0MT05              	100.00%		L0PE81              	100.00%
Bootstrap support for G0MT05 as seed ortholog is 99%.
Bootstrap support for L0PE81 as seed ortholog is 86%.

Group of orthologs #242. Best score 387 bits
Score difference with first non-orthologous sequence - C.brenneri:214 P.jiroveci:387

G0N281              	100.00%		L0PDT0              	100.00%
Bootstrap support for G0N281 as seed ortholog is 100%.
Bootstrap support for L0PDT0 as seed ortholog is 100%.

Group of orthologs #243. Best score 386 bits
Score difference with first non-orthologous sequence - C.brenneri:83 P.jiroveci:386

G0N8Y9              	100.00%		L0PHY6              	100.00%
Bootstrap support for G0N8Y9 as seed ortholog is 99%.
Bootstrap support for L0PHY6 as seed ortholog is 100%.

Group of orthologs #244. Best score 385 bits
Score difference with first non-orthologous sequence - C.brenneri:385 P.jiroveci:385

G0N5D1              	100.00%		L0P942              	100.00%
G0PNU6              	42.87%		L0P7J6              	58.29%
G0PNH9              	25.19%		
Bootstrap support for G0N5D1 as seed ortholog is 100%.
Bootstrap support for L0P942 as seed ortholog is 100%.

Group of orthologs #245. Best score 384 bits
Score difference with first non-orthologous sequence - C.brenneri:384 P.jiroveci:384

G0N3L2              	100.00%		L0PF49              	100.00%
G0P6A4              	99.60%		
Bootstrap support for G0N3L2 as seed ortholog is 100%.
Bootstrap support for L0PF49 as seed ortholog is 100%.

Group of orthologs #246. Best score 384 bits
Score difference with first non-orthologous sequence - C.brenneri:384 P.jiroveci:189

G0N5K4              	100.00%		L0P6V9              	100.00%
Bootstrap support for G0N5K4 as seed ortholog is 100%.
Bootstrap support for L0P6V9 as seed ortholog is 100%.

Group of orthologs #247. Best score 383 bits
Score difference with first non-orthologous sequence - C.brenneri:303 P.jiroveci:383

G0MYV5              	100.00%		L0PF52              	100.00%
Bootstrap support for G0MYV5 as seed ortholog is 100%.
Bootstrap support for L0PF52 as seed ortholog is 100%.

Group of orthologs #248. Best score 382 bits
Score difference with first non-orthologous sequence - C.brenneri:382 P.jiroveci:382

G0PE33              	100.00%		L0PEE4              	100.00%
G0MPY7              	99.47%		
Bootstrap support for G0PE33 as seed ortholog is 100%.
Bootstrap support for L0PEE4 as seed ortholog is 100%.

Group of orthologs #249. Best score 380 bits
Score difference with first non-orthologous sequence - C.brenneri:380 P.jiroveci:380

G0PG27              	100.00%		L0PFN9              	100.00%
                    	       		L0PEF0              	13.71%
Bootstrap support for G0PG27 as seed ortholog is 100%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #250. Best score 378 bits
Score difference with first non-orthologous sequence - C.brenneri:378 P.jiroveci:378

G0PAF6              	100.00%		L0PCQ7              	100.00%
G0NYK1              	51.28%		
Bootstrap support for G0PAF6 as seed ortholog is 100%.
Bootstrap support for L0PCQ7 as seed ortholog is 100%.

Group of orthologs #251. Best score 376 bits
Score difference with first non-orthologous sequence - C.brenneri:376 P.jiroveci:376

G0NCW2              	100.00%		L0P8Z3              	100.00%
G0P121              	100.00%		
Bootstrap support for G0NCW2 as seed ortholog is 100%.
Bootstrap support for G0P121 as seed ortholog is 100%.
Bootstrap support for L0P8Z3 as seed ortholog is 100%.

Group of orthologs #252. Best score 376 bits
Score difference with first non-orthologous sequence - C.brenneri:327 P.jiroveci:376

G0NQN6              	100.00%		L0PB82              	100.00%
G0PAC7              	100.00%		
Bootstrap support for G0NQN6 as seed ortholog is 100%.
Bootstrap support for G0PAC7 as seed ortholog is 100%.
Bootstrap support for L0PB82 as seed ortholog is 100%.

Group of orthologs #253. Best score 375 bits
Score difference with first non-orthologous sequence - C.brenneri:375 P.jiroveci:375

G0NLJ8              	100.00%		L0PBA9              	100.00%
G0NPW1              	99.68%		
G0PL97              	77.99%		
Bootstrap support for G0NLJ8 as seed ortholog is 100%.
Bootstrap support for L0PBA9 as seed ortholog is 100%.

Group of orthologs #254. Best score 375 bits
Score difference with first non-orthologous sequence - C.brenneri:375 P.jiroveci:375

G0PEY7              	100.00%		L0PFT7              	100.00%
G0NKK2              	99.64%		
Bootstrap support for G0PEY7 as seed ortholog is 100%.
Bootstrap support for L0PFT7 as seed ortholog is 100%.

Group of orthologs #255. Best score 374 bits
Score difference with first non-orthologous sequence - C.brenneri:374 P.jiroveci:374

G0NG04              	100.00%		L0PCY5              	100.00%
G0P903              	95.11%		
Bootstrap support for G0NG04 as seed ortholog is 100%.
Bootstrap support for L0PCY5 as seed ortholog is 100%.

Group of orthologs #256. Best score 374 bits
Score difference with first non-orthologous sequence - C.brenneri:374 P.jiroveci:374

G0MFK1              	100.00%		L0P6R7              	100.00%
Bootstrap support for G0MFK1 as seed ortholog is 100%.
Bootstrap support for L0P6R7 as seed ortholog is 100%.

Group of orthologs #257. Best score 373 bits
Score difference with first non-orthologous sequence - C.brenneri:160 P.jiroveci:373

G0N9Q0              	100.00%		L0PA23              	100.00%
G0PMV4              	23.89%		
Bootstrap support for G0N9Q0 as seed ortholog is 99%.
Bootstrap support for L0PA23 as seed ortholog is 100%.

Group of orthologs #258. Best score 373 bits
Score difference with first non-orthologous sequence - C.brenneri:301 P.jiroveci:373

G0NML9              	100.00%		L0P7S7              	100.00%
G0P5H7              	100.00%		
Bootstrap support for G0NML9 as seed ortholog is 100%.
Bootstrap support for G0P5H7 as seed ortholog is 100%.
Bootstrap support for L0P7S7 as seed ortholog is 100%.

Group of orthologs #259. Best score 373 bits
Score difference with first non-orthologous sequence - C.brenneri:180 P.jiroveci:373

G0NWT3              	100.00%		L0PCP3              	100.00%
Bootstrap support for G0NWT3 as seed ortholog is 99%.
Bootstrap support for L0PCP3 as seed ortholog is 100%.

Group of orthologs #260. Best score 372 bits
Score difference with first non-orthologous sequence - C.brenneri:200 P.jiroveci:372

G0N371              	100.00%		L0PEA7              	100.00%
Bootstrap support for G0N371 as seed ortholog is 100%.
Bootstrap support for L0PEA7 as seed ortholog is 100%.

Group of orthologs #261. Best score 371 bits
Score difference with first non-orthologous sequence - C.brenneri:371 P.jiroveci:371

G0P8I2              	100.00%		L0P7N3              	100.00%
G0P8I3              	64.41%		
Bootstrap support for G0P8I2 as seed ortholog is 100%.
Bootstrap support for L0P7N3 as seed ortholog is 100%.

Group of orthologs #262. Best score 370 bits
Score difference with first non-orthologous sequence - C.brenneri:370 P.jiroveci:370

G0MVH8              	100.00%		L0PAH9              	100.00%
                    	       		L0PAZ7              	32.52%
Bootstrap support for G0MVH8 as seed ortholog is 100%.
Bootstrap support for L0PAH9 as seed ortholog is 100%.

Group of orthologs #263. Best score 369 bits
Score difference with first non-orthologous sequence - C.brenneri:369 P.jiroveci:369

G0MGJ5              	100.00%		L0PFI9              	100.00%
Bootstrap support for G0MGJ5 as seed ortholog is 100%.
Bootstrap support for L0PFI9 as seed ortholog is 100%.

Group of orthologs #264. Best score 368 bits
Score difference with first non-orthologous sequence - C.brenneri:368 P.jiroveci:368

G0MTT0              	100.00%		L0PFY1              	100.00%
G0PJ00              	83.82%		
G0PML7              	81.64%		
Bootstrap support for G0MTT0 as seed ortholog is 100%.
Bootstrap support for L0PFY1 as seed ortholog is 100%.

Group of orthologs #265. Best score 368 bits
Score difference with first non-orthologous sequence - C.brenneri:307 P.jiroveci:305

G0PKQ0              	100.00%		L0P7T8              	100.00%
G0M7M5              	57.82%		
Bootstrap support for G0PKQ0 as seed ortholog is 100%.
Bootstrap support for L0P7T8 as seed ortholog is 100%.

Group of orthologs #266. Best score 366 bits
Score difference with first non-orthologous sequence - C.brenneri:366 P.jiroveci:366

G0NUN3              	100.00%		L0PAU1              	100.00%
G0PI50              	100.00%		
Bootstrap support for G0NUN3 as seed ortholog is 100%.
Bootstrap support for G0PI50 as seed ortholog is 100%.
Bootstrap support for L0PAU1 as seed ortholog is 100%.

Group of orthologs #267. Best score 366 bits
Score difference with first non-orthologous sequence - C.brenneri:63 P.jiroveci:205

G0MG58              	100.00%		L0P9Z0              	100.00%
Bootstrap support for G0MG58 as seed ortholog is 96%.
Bootstrap support for L0P9Z0 as seed ortholog is 100%.

Group of orthologs #268. Best score 365 bits
Score difference with first non-orthologous sequence - C.brenneri:365 P.jiroveci:365

G0N2V1              	100.00%		L0PCT1              	100.00%
Bootstrap support for G0N2V1 as seed ortholog is 100%.
Bootstrap support for L0PCT1 as seed ortholog is 100%.

Group of orthologs #269. Best score 364 bits
Score difference with first non-orthologous sequence - C.brenneri:364 P.jiroveci:364

G0MNL1              	100.00%		L0PDM0              	100.00%
G0P6G0              	100.00%		
Bootstrap support for G0MNL1 as seed ortholog is 100%.
Bootstrap support for G0P6G0 as seed ortholog is 100%.
Bootstrap support for L0PDM0 as seed ortholog is 100%.

Group of orthologs #270. Best score 364 bits
Score difference with first non-orthologous sequence - C.brenneri:84 P.jiroveci:364

G0P4W8              	100.00%		L0PH29              	100.00%
G0PFM2              	67.23%		
Bootstrap support for G0P4W8 as seed ortholog is 98%.
Bootstrap support for L0PH29 as seed ortholog is 100%.

Group of orthologs #271. Best score 363 bits
Score difference with first non-orthologous sequence - C.brenneri:363 P.jiroveci:363

G0N0L7              	100.00%		L0PID0              	100.00%
Bootstrap support for G0N0L7 as seed ortholog is 100%.
Bootstrap support for L0PID0 as seed ortholog is 100%.

Group of orthologs #272. Best score 363 bits
Score difference with first non-orthologous sequence - C.brenneri:363 P.jiroveci:363

G0NH33              	100.00%		L0PBE9              	100.00%
Bootstrap support for G0NH33 as seed ortholog is 100%.
Bootstrap support for L0PBE9 as seed ortholog is 100%.

Group of orthologs #273. Best score 363 bits
Score difference with first non-orthologous sequence - C.brenneri:363 P.jiroveci:363

G0P9P0              	100.00%		L0PGJ5              	100.00%
Bootstrap support for G0P9P0 as seed ortholog is 100%.
Bootstrap support for L0PGJ5 as seed ortholog is 100%.

Group of orthologs #274. Best score 362 bits
Score difference with first non-orthologous sequence - C.brenneri:362 P.jiroveci:362

G0N8W6              	100.00%		L0PE98              	100.00%
G0N8W5              	77.61%		
G0NA65              	20.90%		
G0PH08              	20.60%		
G0N3U4              	20.50%		
G0N3U7              	19.90%		
Bootstrap support for G0N8W6 as seed ortholog is 100%.
Bootstrap support for L0PE98 as seed ortholog is 100%.

Group of orthologs #275. Best score 362 bits
Score difference with first non-orthologous sequence - C.brenneri:119 P.jiroveci:140

G0ME07              	100.00%		L0PBU4              	100.00%
Bootstrap support for G0ME07 as seed ortholog is 100%.
Bootstrap support for L0PBU4 as seed ortholog is 100%.

Group of orthologs #276. Best score 359 bits
Score difference with first non-orthologous sequence - C.brenneri:359 P.jiroveci:359

G0NLL4              	100.00%		L0PEZ0              	100.00%
Bootstrap support for G0NLL4 as seed ortholog is 100%.
Bootstrap support for L0PEZ0 as seed ortholog is 100%.

Group of orthologs #277. Best score 357 bits
Score difference with first non-orthologous sequence - C.brenneri:357 P.jiroveci:357

G0N7J2              	100.00%		L0PCR5              	100.00%
                    	       		L0P9C2              	57.69%
Bootstrap support for G0N7J2 as seed ortholog is 100%.
Bootstrap support for L0PCR5 as seed ortholog is 100%.

Group of orthologs #278. Best score 357 bits
Score difference with first non-orthologous sequence - C.brenneri:357 P.jiroveci:357

G0NUZ7              	100.00%		L0PFD9              	100.00%
G0PIK6              	37.09%		
Bootstrap support for G0NUZ7 as seed ortholog is 100%.
Bootstrap support for L0PFD9 as seed ortholog is 100%.

Group of orthologs #279. Best score 356 bits
Score difference with first non-orthologous sequence - C.brenneri:356 P.jiroveci:356

G0PC62              	100.00%		L0P9C9              	100.00%
G0PG66              	72.62%		
Bootstrap support for G0PC62 as seed ortholog is 100%.
Bootstrap support for L0P9C9 as seed ortholog is 100%.

Group of orthologs #280. Best score 355 bits
Score difference with first non-orthologous sequence - C.brenneri:355 P.jiroveci:355

G0NRQ0              	100.00%		L0PHJ7              	100.00%
G0P6T1              	99.53%		
Bootstrap support for G0NRQ0 as seed ortholog is 100%.
Bootstrap support for L0PHJ7 as seed ortholog is 100%.

Group of orthologs #281. Best score 352 bits
Score difference with first non-orthologous sequence - C.brenneri:352 P.jiroveci:352

G0MF35              	100.00%		L0PBC5              	100.00%
G0PFI2              	100.00%		
Bootstrap support for G0MF35 as seed ortholog is 100%.
Bootstrap support for G0PFI2 as seed ortholog is 100%.
Bootstrap support for L0PBC5 as seed ortholog is 100%.

Group of orthologs #282. Best score 352 bits
Score difference with first non-orthologous sequence - C.brenneri:250 P.jiroveci:352

G0MFT4              	100.00%		L0PDF2              	100.00%
G0PCU9              	100.00%		
Bootstrap support for G0MFT4 as seed ortholog is 100%.
Bootstrap support for G0PCU9 as seed ortholog is 100%.
Bootstrap support for L0PDF2 as seed ortholog is 100%.

Group of orthologs #283. Best score 352 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:79

G0PMS2              	100.00%		L0PFY3              	100.00%
G0NX68              	96.64%		
Bootstrap support for G0PMS2 as seed ortholog is 99%.
Bootstrap support for L0PFY3 as seed ortholog is 95%.

Group of orthologs #284. Best score 352 bits
Score difference with first non-orthologous sequence - C.brenneri:27 P.jiroveci:102

G0MK96              	100.00%		L0PAY3              	100.00%
Bootstrap support for G0MK96 as seed ortholog is 80%.
Bootstrap support for L0PAY3 as seed ortholog is 99%.

Group of orthologs #285. Best score 351 bits
Score difference with first non-orthologous sequence - C.brenneri:351 P.jiroveci:351

G0MJN3              	100.00%		L0PGB8              	100.00%
Bootstrap support for G0MJN3 as seed ortholog is 100%.
Bootstrap support for L0PGB8 as seed ortholog is 100%.

Group of orthologs #286. Best score 350 bits
Score difference with first non-orthologous sequence - C.brenneri:350 P.jiroveci:170

G0MF57              	100.00%		L0PBH6              	100.00%
G0P8K7              	62.41%		
G0NVZ7              	37.76%		
Bootstrap support for G0MF57 as seed ortholog is 100%.
Bootstrap support for L0PBH6 as seed ortholog is 99%.

Group of orthologs #287. Best score 349 bits
Score difference with first non-orthologous sequence - C.brenneri:262 P.jiroveci:349

G0NYG0              	100.00%		L0PDQ3              	100.00%
G0P6Y4              	98.86%		
Bootstrap support for G0NYG0 as seed ortholog is 100%.
Bootstrap support for L0PDQ3 as seed ortholog is 100%.

Group of orthologs #288. Best score 349 bits
Score difference with first non-orthologous sequence - C.brenneri:270 P.jiroveci:309

G0MKZ4              	100.00%		L0PEF5              	100.00%
Bootstrap support for G0MKZ4 as seed ortholog is 100%.
Bootstrap support for L0PEF5 as seed ortholog is 100%.

Group of orthologs #289. Best score 348 bits
Score difference with first non-orthologous sequence - C.brenneri:348 P.jiroveci:348

G0PD62              	100.00%		L0PEA0              	100.00%
G0NT80              	95.77%		
Bootstrap support for G0PD62 as seed ortholog is 100%.
Bootstrap support for L0PEA0 as seed ortholog is 100%.

Group of orthologs #290. Best score 347 bits
Score difference with first non-orthologous sequence - C.brenneri:111 P.jiroveci:174

G0N9L5              	100.00%		L0PA26              	100.00%
G0PKK6              	79.00%		
G0MIB0              	23.03%		
Bootstrap support for G0N9L5 as seed ortholog is 99%.
Bootstrap support for L0PA26 as seed ortholog is 99%.

Group of orthologs #291. Best score 346 bits
Score difference with first non-orthologous sequence - C.brenneri:208 P.jiroveci:346

G0P5E4              	100.00%		L0P9R8              	100.00%
G0MQR0              	37.58%		
Bootstrap support for G0P5E4 as seed ortholog is 99%.
Bootstrap support for L0P9R8 as seed ortholog is 100%.

Group of orthologs #292. Best score 346 bits
Score difference with first non-orthologous sequence - C.brenneri:346 P.jiroveci:346

G0MXU3              	100.00%		L0PDT2              	100.00%
Bootstrap support for G0MXU3 as seed ortholog is 100%.
Bootstrap support for L0PDT2 as seed ortholog is 100%.

Group of orthologs #293. Best score 343 bits
Score difference with first non-orthologous sequence - C.brenneri:3 P.jiroveci:111

G0NPH3              	100.00%		L0PGJ9              	100.00%
G0NFQ8              	99.39%		
Bootstrap support for G0NPH3 as seed ortholog is 53%.
Alternative seed ortholog is G0PLM1 (3 bits away from this cluster)
Bootstrap support for L0PGJ9 as seed ortholog is 99%.

Group of orthologs #294. Best score 343 bits
Score difference with first non-orthologous sequence - C.brenneri:343 P.jiroveci:343

G0P8I4              	100.00%		L0PGU0              	100.00%
Bootstrap support for G0P8I4 as seed ortholog is 100%.
Bootstrap support for L0PGU0 as seed ortholog is 100%.

Group of orthologs #295. Best score 342 bits
Score difference with first non-orthologous sequence - C.brenneri:342 P.jiroveci:342

G0P7E9              	100.00%		L0P7L7              	100.00%
G0P9H5              	100.00%		
Bootstrap support for G0P7E9 as seed ortholog is 100%.
Bootstrap support for G0P9H5 as seed ortholog is 100%.
Bootstrap support for L0P7L7 as seed ortholog is 100%.

Group of orthologs #296. Best score 341 bits
Score difference with first non-orthologous sequence - C.brenneri:111 P.jiroveci:341

G0MKB9              	100.00%		L0P702              	100.00%
Bootstrap support for G0MKB9 as seed ortholog is 99%.
Bootstrap support for L0P702 as seed ortholog is 100%.

Group of orthologs #297. Best score 341 bits
Score difference with first non-orthologous sequence - C.brenneri:233 P.jiroveci:341

G0MKV2              	100.00%		L0PI36              	100.00%
Bootstrap support for G0MKV2 as seed ortholog is 100%.
Bootstrap support for L0PI36 as seed ortholog is 100%.

Group of orthologs #298. Best score 340 bits
Score difference with first non-orthologous sequence - C.brenneri:288 P.jiroveci:340

G0N647              	100.00%		L0PIR9              	100.00%
G0NSB0              	100.00%		
Bootstrap support for G0N647 as seed ortholog is 100%.
Bootstrap support for G0NSB0 as seed ortholog is 100%.
Bootstrap support for L0PIR9 as seed ortholog is 100%.

Group of orthologs #299. Best score 339 bits
Score difference with first non-orthologous sequence - C.brenneri:87 P.jiroveci:339

G0N9Q4              	100.00%		L0PA09              	100.00%
G0N9Q5              	11.65%		
Bootstrap support for G0N9Q4 as seed ortholog is 99%.
Bootstrap support for L0PA09 as seed ortholog is 100%.

Group of orthologs #300. Best score 339 bits
Score difference with first non-orthologous sequence - C.brenneri:240 P.jiroveci:233

G0MCF5              	100.00%		L0P7Z7              	100.00%
Bootstrap support for G0MCF5 as seed ortholog is 100%.
Bootstrap support for L0P7Z7 as seed ortholog is 100%.

Group of orthologs #301. Best score 337 bits
Score difference with first non-orthologous sequence - C.brenneri:337 P.jiroveci:286

G0NK87              	100.00%		L0PFP6              	100.00%
Bootstrap support for G0NK87 as seed ortholog is 100%.
Bootstrap support for L0PFP6 as seed ortholog is 100%.

Group of orthologs #302. Best score 336 bits
Score difference with first non-orthologous sequence - C.brenneri:154 P.jiroveci:189

G0P0X0              	100.00%		L0PHE4              	100.00%
Bootstrap support for G0P0X0 as seed ortholog is 99%.
Bootstrap support for L0PHE4 as seed ortholog is 99%.

Group of orthologs #303. Best score 335 bits
Score difference with first non-orthologous sequence - C.brenneri:254 P.jiroveci:266

G0NUX8              	100.00%		L0PA57              	100.00%
Bootstrap support for G0NUX8 as seed ortholog is 100%.
Bootstrap support for L0PA57 as seed ortholog is 100%.

Group of orthologs #304. Best score 334 bits
Score difference with first non-orthologous sequence - C.brenneri:334 P.jiroveci:334

G0PFH5              	100.00%		L0PF23              	100.00%
G0NUF9              	99.23%		
G0MU21              	14.54%		
Bootstrap support for G0PFH5 as seed ortholog is 100%.
Bootstrap support for L0PF23 as seed ortholog is 100%.

Group of orthologs #305. Best score 333 bits
Score difference with first non-orthologous sequence - C.brenneri:333 P.jiroveci:333

G0NYL5              	100.00%		L0P7Z6              	100.00%
G0PAG8              	97.98%		
Bootstrap support for G0NYL5 as seed ortholog is 100%.
Bootstrap support for L0P7Z6 as seed ortholog is 100%.

Group of orthologs #306. Best score 333 bits
Score difference with first non-orthologous sequence - C.brenneri:176 P.jiroveci:333

G0MCA3              	100.00%		L0PE19              	100.00%
Bootstrap support for G0MCA3 as seed ortholog is 100%.
Bootstrap support for L0PE19 as seed ortholog is 100%.

Group of orthologs #307. Best score 332 bits
Score difference with first non-orthologous sequence - C.brenneri:37 P.jiroveci:144

G0MMX7              	100.00%		L0PAY5              	100.00%
G0PJ93              	100.00%		
Bootstrap support for G0MMX7 as seed ortholog is 83%.
Bootstrap support for G0PJ93 as seed ortholog is 82%.
Bootstrap support for L0PAY5 as seed ortholog is 99%.

Group of orthologs #308. Best score 332 bits
Score difference with first non-orthologous sequence - C.brenneri:74 P.jiroveci:332

G0MYV8              	100.00%		L0PA13              	100.00%
Bootstrap support for G0MYV8 as seed ortholog is 95%.
Bootstrap support for L0PA13 as seed ortholog is 100%.

Group of orthologs #309. Best score 332 bits
Score difference with first non-orthologous sequence - C.brenneri:332 P.jiroveci:332

G0N0W9              	100.00%		L0PB24              	100.00%
Bootstrap support for G0N0W9 as seed ortholog is 100%.
Bootstrap support for L0PB24 as seed ortholog is 100%.

Group of orthologs #310. Best score 331 bits
Score difference with first non-orthologous sequence - C.brenneri:108 P.jiroveci:331

G0MES4              	100.00%		L0PAN7              	100.00%
Bootstrap support for G0MES4 as seed ortholog is 99%.
Bootstrap support for L0PAN7 as seed ortholog is 100%.

Group of orthologs #311. Best score 329 bits
Score difference with first non-orthologous sequence - C.brenneri:329 P.jiroveci:329

G0NYV1              	100.00%		L0PFQ8              	100.00%
Bootstrap support for G0NYV1 as seed ortholog is 100%.
Bootstrap support for L0PFQ8 as seed ortholog is 100%.

Group of orthologs #312. Best score 328 bits
Score difference with first non-orthologous sequence - C.brenneri:7 P.jiroveci:328

G0NMP3              	100.00%		L0P9Y8              	100.00%
G0M8I6              	31.03%		
Bootstrap support for G0NMP3 as seed ortholog is 57%.
Alternative seed ortholog is G0NGW2 (7 bits away from this cluster)
Bootstrap support for L0P9Y8 as seed ortholog is 100%.

Group of orthologs #313. Best score 328 bits
Score difference with first non-orthologous sequence - C.brenneri:328 P.jiroveci:328

G0N5T2              	100.00%		L0PDW0              	100.00%
Bootstrap support for G0N5T2 as seed ortholog is 100%.
Bootstrap support for L0PDW0 as seed ortholog is 100%.

Group of orthologs #314. Best score 327 bits
Score difference with first non-orthologous sequence - C.brenneri:6 P.jiroveci:327

G0MNE4              	100.00%		L0PCQ8              	100.00%
G0MEA5              	38.76%		
Bootstrap support for G0MNE4 as seed ortholog is 57%.
Alternative seed ortholog is G0N200 (6 bits away from this cluster)
Bootstrap support for L0PCQ8 as seed ortholog is 100%.

Group of orthologs #315. Best score 326 bits
Score difference with first non-orthologous sequence - C.brenneri:326 P.jiroveci:326

G0PHL3              	100.00%		L0PD82              	100.00%
G0NYH0              	95.05%		
Bootstrap support for G0PHL3 as seed ortholog is 100%.
Bootstrap support for L0PD82 as seed ortholog is 100%.

Group of orthologs #316. Best score 324 bits
Score difference with first non-orthologous sequence - C.brenneri:262 P.jiroveci:267

G0NUL2              	100.00%		L0PD17              	100.00%
G0PBZ2              	100.00%		
Bootstrap support for G0NUL2 as seed ortholog is 100%.
Bootstrap support for G0PBZ2 as seed ortholog is 100%.
Bootstrap support for L0PD17 as seed ortholog is 100%.

Group of orthologs #317. Best score 324 bits
Score difference with first non-orthologous sequence - C.brenneri:324 P.jiroveci:185

G0P849              	100.00%		L0PCH8              	100.00%
G0N743              	99.60%		
Bootstrap support for G0P849 as seed ortholog is 100%.
Bootstrap support for L0PCH8 as seed ortholog is 99%.

Group of orthologs #318. Best score 324 bits
Score difference with first non-orthologous sequence - C.brenneri:222 P.jiroveci:324

G0PD85              	100.00%		L0PA00              	100.00%
Bootstrap support for G0PD85 as seed ortholog is 100%.
Bootstrap support for L0PA00 as seed ortholog is 100%.

Group of orthologs #319. Best score 321 bits
Score difference with first non-orthologous sequence - C.brenneri:321 P.jiroveci:321

G0MFT3              	100.00%		L0P9K4              	100.00%
G0PCU8              	99.54%		
Bootstrap support for G0MFT3 as seed ortholog is 100%.
Bootstrap support for L0P9K4 as seed ortholog is 100%.

Group of orthologs #320. Best score 321 bits
Score difference with first non-orthologous sequence - C.brenneri:321 P.jiroveci:321

G0MLS7              	100.00%		L0PEZ3              	100.00%
G0N2V7              	90.08%		
Bootstrap support for G0MLS7 as seed ortholog is 100%.
Bootstrap support for L0PEZ3 as seed ortholog is 100%.

Group of orthologs #321. Best score 321 bits
Score difference with first non-orthologous sequence - C.brenneri:321 P.jiroveci:321

G0NLX3              	100.00%		L0P9U8              	100.00%
G0NRY4              	99.38%		
Bootstrap support for G0NLX3 as seed ortholog is 100%.
Bootstrap support for L0P9U8 as seed ortholog is 100%.

Group of orthologs #322. Best score 321 bits
Score difference with first non-orthologous sequence - C.brenneri:168 P.jiroveci:113

G0N400              	100.00%		L0PB21              	100.00%
Bootstrap support for G0N400 as seed ortholog is 100%.
Bootstrap support for L0PB21 as seed ortholog is 99%.

Group of orthologs #323. Best score 319 bits
Score difference with first non-orthologous sequence - C.brenneri:63 P.jiroveci:319

G0MH35              	100.00%		L0P8Y6              	100.00%
Bootstrap support for G0MH35 as seed ortholog is 93%.
Bootstrap support for L0P8Y6 as seed ortholog is 100%.

Group of orthologs #324. Best score 319 bits
Score difference with first non-orthologous sequence - C.brenneri:319 P.jiroveci:319

G0P239              	100.00%		L0PB54              	100.00%
Bootstrap support for G0P239 as seed ortholog is 100%.
Bootstrap support for L0PB54 as seed ortholog is 100%.

Group of orthologs #325. Best score 318 bits
Score difference with first non-orthologous sequence - C.brenneri:318 P.jiroveci:318

G0NB35              	100.00%		L0PCV8              	100.00%
G0PNX9              	71.75%		
Bootstrap support for G0NB35 as seed ortholog is 100%.
Bootstrap support for L0PCV8 as seed ortholog is 100%.

Group of orthologs #326. Best score 317 bits
Score difference with first non-orthologous sequence - C.brenneri:317 P.jiroveci:317

G0MEL7              	100.00%		L0PGF5              	100.00%
Bootstrap support for G0MEL7 as seed ortholog is 100%.
Bootstrap support for L0PGF5 as seed ortholog is 100%.

Group of orthologs #327. Best score 317 bits
Score difference with first non-orthologous sequence - C.brenneri:317 P.jiroveci:317

G0MLB9              	100.00%		L0PBA8              	100.00%
Bootstrap support for G0MLB9 as seed ortholog is 100%.
Bootstrap support for L0PBA8 as seed ortholog is 100%.

Group of orthologs #328. Best score 316 bits
Score difference with first non-orthologous sequence - C.brenneri:316 P.jiroveci:316

G0N3P0              	100.00%		L0PD02              	100.00%
Bootstrap support for G0N3P0 as seed ortholog is 100%.
Bootstrap support for L0PD02 as seed ortholog is 100%.

Group of orthologs #329. Best score 313 bits
Score difference with first non-orthologous sequence - C.brenneri:313 P.jiroveci:313

G0MCK3              	100.00%		L0PBQ9              	100.00%
Bootstrap support for G0MCK3 as seed ortholog is 100%.
Bootstrap support for L0PBQ9 as seed ortholog is 100%.

Group of orthologs #330. Best score 313 bits
Score difference with first non-orthologous sequence - C.brenneri:313 P.jiroveci:313

G0MF72              	100.00%		L0PA65              	100.00%
Bootstrap support for G0MF72 as seed ortholog is 100%.
Bootstrap support for L0PA65 as seed ortholog is 100%.

Group of orthologs #331. Best score 312 bits
Score difference with first non-orthologous sequence - C.brenneri:312 P.jiroveci:312

G0PFQ1              	100.00%		L0PAC7              	100.00%
G0NBK1              	98.91%		
Bootstrap support for G0PFQ1 as seed ortholog is 100%.
Bootstrap support for L0PAC7 as seed ortholog is 100%.

Group of orthologs #332. Best score 312 bits
Score difference with first non-orthologous sequence - C.brenneri:215 P.jiroveci:234

G0MJI8              	100.00%		L0PA88              	100.00%
Bootstrap support for G0MJI8 as seed ortholog is 99%.
Bootstrap support for L0PA88 as seed ortholog is 100%.

Group of orthologs #333. Best score 312 bits
Score difference with first non-orthologous sequence - C.brenneri:128 P.jiroveci:194

G0MEC2              	100.00%		L0PGH8              	100.00%
Bootstrap support for G0MEC2 as seed ortholog is 99%.
Bootstrap support for L0PGH8 as seed ortholog is 100%.

Group of orthologs #334. Best score 311 bits
Score difference with first non-orthologous sequence - C.brenneri:51 P.jiroveci:125

G0PMX8              	100.00%		L0P6X2              	100.00%
Bootstrap support for G0PMX8 as seed ortholog is 96%.
Bootstrap support for L0P6X2 as seed ortholog is 100%.

Group of orthologs #335. Best score 310 bits
Score difference with first non-orthologous sequence - C.brenneri:262 P.jiroveci:310

G0MJM6              	100.00%		L0PBN2              	100.00%
Bootstrap support for G0MJM6 as seed ortholog is 100%.
Bootstrap support for L0PBN2 as seed ortholog is 100%.

Group of orthologs #336. Best score 310 bits
Score difference with first non-orthologous sequence - C.brenneri:310 P.jiroveci:310

G0NEZ9              	100.00%		L0PBI2              	100.00%
Bootstrap support for G0NEZ9 as seed ortholog is 100%.
Bootstrap support for L0PBI2 as seed ortholog is 100%.

Group of orthologs #337. Best score 309 bits
Score difference with first non-orthologous sequence - C.brenneri:235 P.jiroveci:309

G0MN13              	100.00%		L0P8G8              	100.00%
Bootstrap support for G0MN13 as seed ortholog is 100%.
Bootstrap support for L0P8G8 as seed ortholog is 100%.

Group of orthologs #338. Best score 308 bits
Score difference with first non-orthologous sequence - C.brenneri:116 P.jiroveci:184

G0N4T5              	100.00%		L0PC98              	100.00%
Bootstrap support for G0N4T5 as seed ortholog is 99%.
Bootstrap support for L0PC98 as seed ortholog is 99%.

Group of orthologs #339. Best score 308 bits
Score difference with first non-orthologous sequence - C.brenneri:115 P.jiroveci:308

G0N9C8              	100.00%		L0PBP3              	100.00%
Bootstrap support for G0N9C8 as seed ortholog is 98%.
Bootstrap support for L0PBP3 as seed ortholog is 100%.

Group of orthologs #340. Best score 308 bits
Score difference with first non-orthologous sequence - C.brenneri:308 P.jiroveci:308

G0NRT5              	100.00%		L0PBT8              	100.00%
Bootstrap support for G0NRT5 as seed ortholog is 100%.
Bootstrap support for L0PBT8 as seed ortholog is 100%.

Group of orthologs #341. Best score 308 bits
Score difference with first non-orthologous sequence - C.brenneri:308 P.jiroveci:308

G0P2Y2              	100.00%		L0P7N5              	100.00%
Bootstrap support for G0P2Y2 as seed ortholog is 100%.
Bootstrap support for L0P7N5 as seed ortholog is 100%.

Group of orthologs #342. Best score 307 bits
Score difference with first non-orthologous sequence - C.brenneri:307 P.jiroveci:307

G0P0Y7              	100.00%		L0P969              	100.00%
G0PEM2              	46.96%		
Bootstrap support for G0P0Y7 as seed ortholog is 100%.
Bootstrap support for L0P969 as seed ortholog is 100%.

Group of orthologs #343. Best score 307 bits
Score difference with first non-orthologous sequence - C.brenneri:307 P.jiroveci:307

G0P5G7              	100.00%		L0PD03              	100.00%
Bootstrap support for G0P5G7 as seed ortholog is 100%.
Bootstrap support for L0PD03 as seed ortholog is 100%.

Group of orthologs #344. Best score 305 bits
Score difference with first non-orthologous sequence - C.brenneri:246 P.jiroveci:305

G0MBV0              	100.00%		L0PFY2              	100.00%
Bootstrap support for G0MBV0 as seed ortholog is 100%.
Bootstrap support for L0PFY2 as seed ortholog is 100%.

Group of orthologs #345. Best score 303 bits
Score difference with first non-orthologous sequence - C.brenneri:16 P.jiroveci:303

G0MT20              	100.00%		L0PGR0              	100.00%
G0N5M5              	38.52%		
Bootstrap support for G0MT20 as seed ortholog is 61%.
Alternative seed ortholog is G0NV76 (16 bits away from this cluster)
Bootstrap support for L0PGR0 as seed ortholog is 100%.

Group of orthologs #346. Best score 303 bits
Score difference with first non-orthologous sequence - C.brenneri:303 P.jiroveci:303

G0MET0              	100.00%		L0PEB2              	100.00%
Bootstrap support for G0MET0 as seed ortholog is 100%.
Bootstrap support for L0PEB2 as seed ortholog is 100%.

Group of orthologs #347. Best score 303 bits
Score difference with first non-orthologous sequence - C.brenneri:65 P.jiroveci:303

G0MK75              	100.00%		L0PAR0              	100.00%
Bootstrap support for G0MK75 as seed ortholog is 92%.
Bootstrap support for L0PAR0 as seed ortholog is 100%.

Group of orthologs #348. Best score 302 bits
Score difference with first non-orthologous sequence - C.brenneri:302 P.jiroveci:302

G0N8R9              	100.00%		L0PG82              	100.00%
G0PM59              	23.89%		
Bootstrap support for G0N8R9 as seed ortholog is 100%.
Bootstrap support for L0PG82 as seed ortholog is 100%.

Group of orthologs #349. Best score 302 bits
Score difference with first non-orthologous sequence - C.brenneri:119 P.jiroveci:302

G0NFK9              	100.00%		L0PA42              	100.00%
Bootstrap support for G0NFK9 as seed ortholog is 100%.
Bootstrap support for L0PA42 as seed ortholog is 100%.

Group of orthologs #350. Best score 301 bits
Score difference with first non-orthologous sequence - C.brenneri:301 P.jiroveci:301

G0NX96              	100.00%		L0PCB2              	100.00%
G0PIW2              	100.00%		
Bootstrap support for G0NX96 as seed ortholog is 100%.
Bootstrap support for G0PIW2 as seed ortholog is 100%.
Bootstrap support for L0PCB2 as seed ortholog is 100%.

Group of orthologs #351. Best score 300 bits
Score difference with first non-orthologous sequence - C.brenneri:300 P.jiroveci:300

G0PGP6              	100.00%		L0PD32              	100.00%
G0MLY1              	99.54%		L0PD26              	94.96%
Bootstrap support for G0PGP6 as seed ortholog is 100%.
Bootstrap support for L0PD32 as seed ortholog is 100%.

Group of orthologs #352. Best score 300 bits
Score difference with first non-orthologous sequence - C.brenneri:300 P.jiroveci:300

G0PB53              	100.00%		L0PF30              	100.00%
G0NRL5              	78.79%		
Bootstrap support for G0PB53 as seed ortholog is 100%.
Bootstrap support for L0PF30 as seed ortholog is 100%.

Group of orthologs #353. Best score 300 bits
Score difference with first non-orthologous sequence - C.brenneri:235 P.jiroveci:300

G0MZ09              	100.00%		L0PBS9              	100.00%
Bootstrap support for G0MZ09 as seed ortholog is 100%.
Bootstrap support for L0PBS9 as seed ortholog is 100%.

Group of orthologs #354. Best score 299 bits
Score difference with first non-orthologous sequence - C.brenneri:299 P.jiroveci:299

G0NGU8              	100.00%		L0P8W4              	100.00%
Bootstrap support for G0NGU8 as seed ortholog is 100%.
Bootstrap support for L0P8W4 as seed ortholog is 100%.

Group of orthologs #355. Best score 298 bits
Score difference with first non-orthologous sequence - C.brenneri:298 P.jiroveci:298

G0N442              	100.00%		L0P9X7              	100.00%
G0PJT7              	100.00%		
Bootstrap support for G0N442 as seed ortholog is 100%.
Bootstrap support for G0PJT7 as seed ortholog is 100%.
Bootstrap support for L0P9X7 as seed ortholog is 100%.

Group of orthologs #356. Best score 297 bits
Score difference with first non-orthologous sequence - C.brenneri:23 P.jiroveci:297

G0MCD7              	100.00%		L0PBM5              	100.00%
G0MCE4              	58.22%		
Bootstrap support for G0MCD7 as seed ortholog is 67%.
Alternative seed ortholog is G0MF71 (23 bits away from this cluster)
Bootstrap support for L0PBM5 as seed ortholog is 100%.

Group of orthologs #357. Best score 296 bits
Score difference with first non-orthologous sequence - C.brenneri:202 P.jiroveci:296

G0NTD0              	100.00%		L0P7P4              	100.00%
G0P8T2              	98.26%		
Bootstrap support for G0NTD0 as seed ortholog is 100%.
Bootstrap support for L0P7P4 as seed ortholog is 100%.

Group of orthologs #358. Best score 296 bits
Score difference with first non-orthologous sequence - C.brenneri:58 P.jiroveci:296

G0NMP4              	100.00%		L0PBY2              	100.00%
Bootstrap support for G0NMP4 as seed ortholog is 91%.
Bootstrap support for L0PBY2 as seed ortholog is 100%.

Group of orthologs #359. Best score 296 bits
Score difference with first non-orthologous sequence - C.brenneri:222 P.jiroveci:296

G0NYI5              	100.00%		L0P8X3              	100.00%
Bootstrap support for G0NYI5 as seed ortholog is 99%.
Bootstrap support for L0P8X3 as seed ortholog is 100%.

Group of orthologs #360. Best score 295 bits
Score difference with first non-orthologous sequence - C.brenneri:295 P.jiroveci:295

G0N447              	100.00%		L0PF46              	100.00%
G0PNG2              	78.07%		
Bootstrap support for G0N447 as seed ortholog is 100%.
Bootstrap support for L0PF46 as seed ortholog is 100%.

Group of orthologs #361. Best score 295 bits
Score difference with first non-orthologous sequence - C.brenneri:295 P.jiroveci:295

G0N6C1              	100.00%		L0PCA7              	100.00%
Bootstrap support for G0N6C1 as seed ortholog is 100%.
Bootstrap support for L0PCA7 as seed ortholog is 100%.

Group of orthologs #362. Best score 294 bits
Score difference with first non-orthologous sequence - C.brenneri:294 P.jiroveci:294

G0P5U1              	100.00%		L0PAG0              	100.00%
Bootstrap support for G0P5U1 as seed ortholog is 100%.
Bootstrap support for L0PAG0 as seed ortholog is 100%.

Group of orthologs #363. Best score 293 bits
Score difference with first non-orthologous sequence - C.brenneri:62 P.jiroveci:74

G0MFU2              	100.00%		L0PF10              	100.00%
G0PA49              	100.00%		
Bootstrap support for G0MFU2 as seed ortholog is 97%.
Bootstrap support for G0PA49 as seed ortholog is 97%.
Bootstrap support for L0PF10 as seed ortholog is 99%.

Group of orthologs #364. Best score 292 bits
Score difference with first non-orthologous sequence - C.brenneri:162 P.jiroveci:292

G0MXZ9              	100.00%		L0PC17              	100.00%
G0PLZ3              	92.23%		L0PD22              	55.16%
Bootstrap support for G0MXZ9 as seed ortholog is 100%.
Bootstrap support for L0PC17 as seed ortholog is 100%.

Group of orthologs #365. Best score 292 bits
Score difference with first non-orthologous sequence - C.brenneri:292 P.jiroveci:292

G0MBR6              	100.00%		L0P8J2              	100.00%
Bootstrap support for G0MBR6 as seed ortholog is 100%.
Bootstrap support for L0P8J2 as seed ortholog is 100%.

Group of orthologs #366. Best score 292 bits
Score difference with first non-orthologous sequence - C.brenneri:292 P.jiroveci:292

G0N1K7              	100.00%		L0P7R5              	100.00%
Bootstrap support for G0N1K7 as seed ortholog is 100%.
Bootstrap support for L0P7R5 as seed ortholog is 100%.

Group of orthologs #367. Best score 292 bits
Score difference with first non-orthologous sequence - C.brenneri:292 P.jiroveci:292

G0MXG8              	100.00%		L0PC82              	100.00%
Bootstrap support for G0MXG8 as seed ortholog is 100%.
Bootstrap support for L0PC82 as seed ortholog is 100%.

Group of orthologs #368. Best score 291 bits
Score difference with first non-orthologous sequence - C.brenneri:118 P.jiroveci:48

G0NQ20              	100.00%		L0PBP2              	100.00%
G0ML80              	38.49%		
G0MLE1              	6.19%		
Bootstrap support for G0NQ20 as seed ortholog is 98%.
Bootstrap support for L0PBP2 as seed ortholog is 76%.

Group of orthologs #369. Best score 291 bits
Score difference with first non-orthologous sequence - C.brenneri:291 P.jiroveci:291

G0MZI3              	100.00%		L0P861              	100.00%
G0PGI1              	29.60%		
Bootstrap support for G0MZI3 as seed ortholog is 100%.
Bootstrap support for L0P861 as seed ortholog is 100%.

Group of orthologs #370. Best score 289 bits
Score difference with first non-orthologous sequence - C.brenneri:113 P.jiroveci:289

G0P0Y4              	100.00%		L0PD18              	100.00%
G0PEL8              	99.44%		
Bootstrap support for G0P0Y4 as seed ortholog is 99%.
Bootstrap support for L0PD18 as seed ortholog is 100%.

Group of orthologs #371. Best score 289 bits
Score difference with first non-orthologous sequence - C.brenneri:289 P.jiroveci:289

G0NNX2              	100.00%		L0P9Z7              	100.00%
Bootstrap support for G0NNX2 as seed ortholog is 100%.
Bootstrap support for L0P9Z7 as seed ortholog is 100%.

Group of orthologs #372. Best score 289 bits
Score difference with first non-orthologous sequence - C.brenneri:289 P.jiroveci:289

G0NYE1              	100.00%		L0PD68              	100.00%
Bootstrap support for G0NYE1 as seed ortholog is 100%.
Bootstrap support for L0PD68 as seed ortholog is 100%.

Group of orthologs #373. Best score 287 bits
Score difference with first non-orthologous sequence - C.brenneri:287 P.jiroveci:156

G0N7M5              	100.00%		L0PC90              	100.00%
Bootstrap support for G0N7M5 as seed ortholog is 100%.
Bootstrap support for L0PC90 as seed ortholog is 100%.

Group of orthologs #374. Best score 287 bits
Score difference with first non-orthologous sequence - C.brenneri:287 P.jiroveci:287

G0PB51              	100.00%		L0PFI8              	100.00%
Bootstrap support for G0PB51 as seed ortholog is 100%.
Bootstrap support for L0PFI8 as seed ortholog is 100%.

Group of orthologs #375. Best score 287 bits
Score difference with first non-orthologous sequence - C.brenneri:223 P.jiroveci:287

G0PMQ1              	100.00%		L0PHJ3              	100.00%
Bootstrap support for G0PMQ1 as seed ortholog is 100%.
Bootstrap support for L0PHJ3 as seed ortholog is 100%.

Group of orthologs #376. Best score 286 bits
Score difference with first non-orthologous sequence - C.brenneri:95 P.jiroveci:286

G0MBK7              	100.00%		L0PG89              	100.00%
G0MSH4              	7.45%		
Bootstrap support for G0MBK7 as seed ortholog is 99%.
Bootstrap support for L0PG89 as seed ortholog is 100%.

Group of orthologs #377. Best score 286 bits
Score difference with first non-orthologous sequence - C.brenneri:286 P.jiroveci:286

G0PG06              	100.00%		L0P8R5              	100.00%
Bootstrap support for G0PG06 as seed ortholog is 100%.
Bootstrap support for L0P8R5 as seed ortholog is 100%.

Group of orthologs #378. Best score 285 bits
Score difference with first non-orthologous sequence - C.brenneri:285 P.jiroveci:285

G0NCK9              	100.00%		L0PDY1              	100.00%
G0P6W8              	21.05%		
Bootstrap support for G0NCK9 as seed ortholog is 100%.
Bootstrap support for L0PDY1 as seed ortholog is 100%.

Group of orthologs #379. Best score 285 bits
Score difference with first non-orthologous sequence - C.brenneri:285 P.jiroveci:285

G0NUN0              	100.00%		L0PDC7              	100.00%
G0PI54              	100.00%		
Bootstrap support for G0NUN0 as seed ortholog is 100%.
Bootstrap support for G0PI54 as seed ortholog is 100%.
Bootstrap support for L0PDC7 as seed ortholog is 100%.

Group of orthologs #380. Best score 285 bits
Score difference with first non-orthologous sequence - C.brenneri:14 P.jiroveci:142

G0PFE9              	100.00%		L0PEM1              	100.00%
G0MNS6              	86.78%		
Bootstrap support for G0PFE9 as seed ortholog is 71%.
Alternative seed ortholog is G0MK20 (14 bits away from this cluster)
Bootstrap support for L0PEM1 as seed ortholog is 100%.

Group of orthologs #381. Best score 285 bits
Score difference with first non-orthologous sequence - C.brenneri:112 P.jiroveci:285

G0N073              	100.00%		L0P891              	100.00%
Bootstrap support for G0N073 as seed ortholog is 99%.
Bootstrap support for L0P891 as seed ortholog is 100%.

Group of orthologs #382. Best score 285 bits
Score difference with first non-orthologous sequence - C.brenneri:285 P.jiroveci:285

G0NC16              	100.00%		L0PBZ7              	100.00%
Bootstrap support for G0NC16 as seed ortholog is 100%.
Bootstrap support for L0PBZ7 as seed ortholog is 100%.

Group of orthologs #383. Best score 285 bits
Score difference with first non-orthologous sequence - C.brenneri:285 P.jiroveci:285

G0P4D6              	100.00%		L0PCG4              	100.00%
Bootstrap support for G0P4D6 as seed ortholog is 100%.
Bootstrap support for L0PCG4 as seed ortholog is 100%.

Group of orthologs #384. Best score 284 bits
Score difference with first non-orthologous sequence - C.brenneri:284 P.jiroveci:284

G0MER0              	100.00%		L0PAU5              	100.00%
Bootstrap support for G0MER0 as seed ortholog is 100%.
Bootstrap support for L0PAU5 as seed ortholog is 100%.

Group of orthologs #385. Best score 284 bits
Score difference with first non-orthologous sequence - C.brenneri:284 P.jiroveci:284

G0NGR7              	100.00%		L0PG96              	100.00%
Bootstrap support for G0NGR7 as seed ortholog is 100%.
Bootstrap support for L0PG96 as seed ortholog is 100%.

Group of orthologs #386. Best score 283 bits
Score difference with first non-orthologous sequence - C.brenneri:283 P.jiroveci:283

G0NRJ4              	100.00%		L0PAP4              	100.00%
Bootstrap support for G0NRJ4 as seed ortholog is 100%.
Bootstrap support for L0PAP4 as seed ortholog is 100%.

Group of orthologs #387. Best score 282 bits
Score difference with first non-orthologous sequence - C.brenneri:99 P.jiroveci:282

G0MX16              	100.00%		L0P983              	100.00%
G0MZI2              	18.96%		
G0PGI0              	18.29%		
Bootstrap support for G0MX16 as seed ortholog is 94%.
Bootstrap support for L0P983 as seed ortholog is 100%.

Group of orthologs #388. Best score 282 bits
Score difference with first non-orthologous sequence - C.brenneri:282 P.jiroveci:282

G0P1U1              	100.00%		L0PEX5              	100.00%
G0MFD4              	99.42%		
Bootstrap support for G0P1U1 as seed ortholog is 100%.
Bootstrap support for L0PEX5 as seed ortholog is 100%.

Group of orthologs #389. Best score 282 bits
Score difference with first non-orthologous sequence - C.brenneri:134 P.jiroveci:86

G0NJK0              	100.00%		L0PC99              	100.00%
Bootstrap support for G0NJK0 as seed ortholog is 99%.
Bootstrap support for L0PC99 as seed ortholog is 95%.

Group of orthologs #390. Best score 282 bits
Score difference with first non-orthologous sequence - C.brenneri:282 P.jiroveci:282

G0PES2              	100.00%		L0PEJ3              	100.00%
Bootstrap support for G0PES2 as seed ortholog is 100%.
Bootstrap support for L0PEJ3 as seed ortholog is 100%.

Group of orthologs #391. Best score 281 bits
Score difference with first non-orthologous sequence - C.brenneri:281 P.jiroveci:281

G0NYX6              	100.00%		L0PFZ0              	100.00%
Bootstrap support for G0NYX6 as seed ortholog is 100%.
Bootstrap support for L0PFZ0 as seed ortholog is 100%.

Group of orthologs #392. Best score 280 bits
Score difference with first non-orthologous sequence - C.brenneri:280 P.jiroveci:280

G0NMK8              	100.00%		L0PFI2              	100.00%
G0P5G8              	98.76%		
Bootstrap support for G0NMK8 as seed ortholog is 100%.
Bootstrap support for L0PFI2 as seed ortholog is 100%.

Group of orthologs #393. Best score 280 bits
Score difference with first non-orthologous sequence - C.brenneri:280 P.jiroveci:280

G0MVI0              	100.00%		L0PAQ1              	100.00%
Bootstrap support for G0MVI0 as seed ortholog is 100%.
Bootstrap support for L0PAQ1 as seed ortholog is 100%.

Group of orthologs #394. Best score 280 bits
Score difference with first non-orthologous sequence - C.brenneri:280 P.jiroveci:280

G0MXH5              	100.00%		L0PF83              	100.00%
Bootstrap support for G0MXH5 as seed ortholog is 100%.
Bootstrap support for L0PF83 as seed ortholog is 100%.

Group of orthologs #395. Best score 280 bits
Score difference with first non-orthologous sequence - C.brenneri:280 P.jiroveci:280

G0N4P7              	100.00%		L0P870              	100.00%
Bootstrap support for G0N4P7 as seed ortholog is 100%.
Bootstrap support for L0P870 as seed ortholog is 100%.

Group of orthologs #396. Best score 280 bits
Score difference with first non-orthologous sequence - C.brenneri:280 P.jiroveci:280

G0NJU0              	100.00%		L0P8N0              	100.00%
Bootstrap support for G0NJU0 as seed ortholog is 100%.
Bootstrap support for L0P8N0 as seed ortholog is 100%.

Group of orthologs #397. Best score 279 bits
Score difference with first non-orthologous sequence - C.brenneri:98 P.jiroveci:279

G0MF16              	100.00%		L0P9F6              	100.00%
G0P8Q0              	100.00%		
G0MCH8              	80.70%		
G0NIP6              	50.00%		
G0PI51              	14.04%		
G0NUN2              	14.04%		
Bootstrap support for G0MF16 as seed ortholog is 99%.
Bootstrap support for G0P8Q0 as seed ortholog is 99%.
Bootstrap support for L0P9F6 as seed ortholog is 100%.

Group of orthologs #398. Best score 279 bits
Score difference with first non-orthologous sequence - C.brenneri:155 P.jiroveci:230

G0NZV2              	100.00%		L0P8I7              	100.00%
Bootstrap support for G0NZV2 as seed ortholog is 100%.
Bootstrap support for L0P8I7 as seed ortholog is 100%.

Group of orthologs #399. Best score 277 bits
Score difference with first non-orthologous sequence - C.brenneri:138 P.jiroveci:215

G0MIG9              	100.00%		L0PGP6              	100.00%
G0NB44              	37.04%		
Bootstrap support for G0MIG9 as seed ortholog is 100%.
Bootstrap support for L0PGP6 as seed ortholog is 100%.

Group of orthologs #400. Best score 277 bits
Score difference with first non-orthologous sequence - C.brenneri:277 P.jiroveci:277

G0N3J3              	100.00%		L0P9B8              	100.00%
Bootstrap support for G0N3J3 as seed ortholog is 100%.
Bootstrap support for L0P9B8 as seed ortholog is 100%.

Group of orthologs #401. Best score 277 bits
Score difference with first non-orthologous sequence - C.brenneri:277 P.jiroveci:277

G0NX82              	100.00%		L0PBP4              	100.00%
Bootstrap support for G0NX82 as seed ortholog is 100%.
Bootstrap support for L0PBP4 as seed ortholog is 100%.

Group of orthologs #402. Best score 276 bits
Score difference with first non-orthologous sequence - C.brenneri:276 P.jiroveci:276

G0MVH9              	100.00%		L0P7I8              	100.00%
Bootstrap support for G0MVH9 as seed ortholog is 100%.
Bootstrap support for L0P7I8 as seed ortholog is 100%.

Group of orthologs #403. Best score 275 bits
Score difference with first non-orthologous sequence - C.brenneri:275 P.jiroveci:173

G0P1F8              	100.00%		L0PBN1              	100.00%
G0P5P5              	95.84%		
Bootstrap support for G0P1F8 as seed ortholog is 100%.
Bootstrap support for L0PBN1 as seed ortholog is 99%.

Group of orthologs #404. Best score 275 bits
Score difference with first non-orthologous sequence - C.brenneri:226 P.jiroveci:275

G0PDS2              	100.00%		L0PDL9              	100.00%
G0NJR2              	97.99%		
Bootstrap support for G0PDS2 as seed ortholog is 100%.
Bootstrap support for L0PDL9 as seed ortholog is 100%.

Group of orthologs #405. Best score 275 bits
Score difference with first non-orthologous sequence - C.brenneri:275 P.jiroveci:275

G0N2R3              	100.00%		L0P9X4              	100.00%
Bootstrap support for G0N2R3 as seed ortholog is 100%.
Bootstrap support for L0P9X4 as seed ortholog is 100%.

Group of orthologs #406. Best score 274 bits
Score difference with first non-orthologous sequence - C.brenneri:173 P.jiroveci:274

G0PJ75              	100.00%		L0P961              	100.00%
G0PGG9              	7.32%		
Bootstrap support for G0PJ75 as seed ortholog is 99%.
Bootstrap support for L0P961 as seed ortholog is 100%.

Group of orthologs #407. Best score 274 bits
Score difference with first non-orthologous sequence - C.brenneri:274 P.jiroveci:274

G0MB55              	100.00%		L0P7L8              	100.00%
Bootstrap support for G0MB55 as seed ortholog is 100%.
Bootstrap support for L0P7L8 as seed ortholog is 100%.

Group of orthologs #408. Best score 274 bits
Score difference with first non-orthologous sequence - C.brenneri:85 P.jiroveci:116

G0MR91              	100.00%		L0PC59              	100.00%
Bootstrap support for G0MR91 as seed ortholog is 99%.
Bootstrap support for L0PC59 as seed ortholog is 100%.

Group of orthologs #409. Best score 273 bits
Score difference with first non-orthologous sequence - C.brenneri:273 P.jiroveci:273

G0NYK0              	100.00%		L0PDI7              	100.00%
Bootstrap support for G0NYK0 as seed ortholog is 100%.
Bootstrap support for L0PDI7 as seed ortholog is 100%.

Group of orthologs #410. Best score 273 bits
Score difference with first non-orthologous sequence - C.brenneri:273 P.jiroveci:273

G0NYC8              	100.00%		L0PDV1              	100.00%
Bootstrap support for G0NYC8 as seed ortholog is 100%.
Bootstrap support for L0PDV1 as seed ortholog is 100%.

Group of orthologs #411. Best score 272 bits
Score difference with first non-orthologous sequence - C.brenneri:59 P.jiroveci:272

G0NVA4              	100.00%		L0PDF9              	100.00%
G0P136              	100.00%		
G0NYD7              	34.77%		
G0NS19              	33.71%		
G0NTU3              	27.79%		
G0PFD7              	23.23%		
G0NHI9              	15.26%		
G0N8K5              	13.90%		
G0NK62              	11.39%		
G0P5J3              	5.69%		
Bootstrap support for G0NVA4 as seed ortholog is 94%.
Bootstrap support for G0P136 as seed ortholog is 94%.
Bootstrap support for L0PDF9 as seed ortholog is 100%.

Group of orthologs #412. Best score 272 bits
Score difference with first non-orthologous sequence - C.brenneri:211 P.jiroveci:272

G0PBC3              	100.00%		L0PDZ2              	100.00%
G0P4R6              	97.80%		
Bootstrap support for G0PBC3 as seed ortholog is 100%.
Bootstrap support for L0PDZ2 as seed ortholog is 100%.

Group of orthologs #413. Best score 271 bits
Score difference with first non-orthologous sequence - C.brenneri:271 P.jiroveci:271

G0MEL9              	100.00%		L0PAJ2              	100.00%
Bootstrap support for G0MEL9 as seed ortholog is 100%.
Bootstrap support for L0PAJ2 as seed ortholog is 100%.

Group of orthologs #414. Best score 271 bits
Score difference with first non-orthologous sequence - C.brenneri:271 P.jiroveci:271

G0N9C9              	100.00%		L0P8X1              	100.00%
Bootstrap support for G0N9C9 as seed ortholog is 100%.
Bootstrap support for L0P8X1 as seed ortholog is 100%.

Group of orthologs #415. Best score 270 bits
Score difference with first non-orthologous sequence - C.brenneri:270 P.jiroveci:140

G0PCC1              	100.00%		L0PAI0              	100.00%
G0MPU4              	84.16%		
Bootstrap support for G0PCC1 as seed ortholog is 100%.
Bootstrap support for L0PAI0 as seed ortholog is 99%.

Group of orthologs #416. Best score 270 bits
Score difference with first non-orthologous sequence - C.brenneri:174 P.jiroveci:132

G0MBR7              	100.00%		L0PDB7              	100.00%
Bootstrap support for G0MBR7 as seed ortholog is 100%.
Bootstrap support for L0PDB7 as seed ortholog is 99%.

Group of orthologs #417. Best score 269 bits
Score difference with first non-orthologous sequence - C.brenneri:269 P.jiroveci:269

G0MK38              	100.00%		L0PBD2              	100.00%
Bootstrap support for G0MK38 as seed ortholog is 100%.
Bootstrap support for L0PBD2 as seed ortholog is 100%.

Group of orthologs #418. Best score 269 bits
Score difference with first non-orthologous sequence - C.brenneri:269 P.jiroveci:182

G0NT89              	100.00%		L0P8R8              	100.00%
Bootstrap support for G0NT89 as seed ortholog is 100%.
Bootstrap support for L0P8R8 as seed ortholog is 99%.

Group of orthologs #419. Best score 268 bits
Score difference with first non-orthologous sequence - C.brenneri:268 P.jiroveci:268

G0MES2              	100.00%		L0PDD5              	100.00%
Bootstrap support for G0MES2 as seed ortholog is 100%.
Bootstrap support for L0PDD5 as seed ortholog is 100%.

Group of orthologs #420. Best score 268 bits
Score difference with first non-orthologous sequence - C.brenneri:268 P.jiroveci:268

G0N3A2              	100.00%		L0PCY9              	100.00%
Bootstrap support for G0N3A2 as seed ortholog is 100%.
Bootstrap support for L0PCY9 as seed ortholog is 100%.

Group of orthologs #421. Best score 268 bits
Score difference with first non-orthologous sequence - C.brenneri:65 P.jiroveci:29

G0NIJ8              	100.00%		L0PD71              	100.00%
Bootstrap support for G0NIJ8 as seed ortholog is 95%.
Bootstrap support for L0PD71 as seed ortholog is 80%.

Group of orthologs #422. Best score 267 bits
Score difference with first non-orthologous sequence - C.brenneri:267 P.jiroveci:267

G0NY22              	100.00%		L0PHG7              	100.00%
Bootstrap support for G0NY22 as seed ortholog is 100%.
Bootstrap support for L0PHG7 as seed ortholog is 100%.

Group of orthologs #423. Best score 266 bits
Score difference with first non-orthologous sequence - C.brenneri:266 P.jiroveci:266

G0NR82              	100.00%		L0PCL9              	100.00%
Bootstrap support for G0NR82 as seed ortholog is 100%.
Bootstrap support for L0PCL9 as seed ortholog is 100%.

Group of orthologs #424. Best score 265 bits
Score difference with first non-orthologous sequence - C.brenneri:265 P.jiroveci:265

G0NY89              	100.00%		L0PFJ5              	100.00%
G0PA97              	78.12%		
G0NI19              	42.40%		
Bootstrap support for G0NY89 as seed ortholog is 100%.
Bootstrap support for L0PFJ5 as seed ortholog is 100%.

Group of orthologs #425. Best score 265 bits
Score difference with first non-orthologous sequence - C.brenneri:155 P.jiroveci:265

G0NZU2              	100.00%		L0P865              	100.00%
G0MZ17              	99.15%		
Bootstrap support for G0NZU2 as seed ortholog is 100%.
Bootstrap support for L0P865 as seed ortholog is 100%.

Group of orthologs #426. Best score 265 bits
Score difference with first non-orthologous sequence - C.brenneri:265 P.jiroveci:265

G0NGS6              	100.00%		L0PF92              	100.00%
Bootstrap support for G0NGS6 as seed ortholog is 100%.
Bootstrap support for L0PF92 as seed ortholog is 100%.

Group of orthologs #427. Best score 264 bits
Score difference with first non-orthologous sequence - C.brenneri:264 P.jiroveci:264

G0NWY4              	100.00%		L0PC62              	100.00%
G0PEA8              	100.00%		
Bootstrap support for G0NWY4 as seed ortholog is 100%.
Bootstrap support for G0PEA8 as seed ortholog is 100%.
Bootstrap support for L0PC62 as seed ortholog is 100%.

Group of orthologs #428. Best score 263 bits
Score difference with first non-orthologous sequence - C.brenneri:263 P.jiroveci:263

G0NBS7              	100.00%		L0P9G9              	100.00%
Bootstrap support for G0NBS7 as seed ortholog is 100%.
Bootstrap support for L0P9G9 as seed ortholog is 100%.

Group of orthologs #429. Best score 263 bits
Score difference with first non-orthologous sequence - C.brenneri:182 P.jiroveci:263

G0N7N4              	100.00%		L0PDV0              	100.00%
Bootstrap support for G0N7N4 as seed ortholog is 99%.
Bootstrap support for L0PDV0 as seed ortholog is 100%.

Group of orthologs #430. Best score 262 bits
Score difference with first non-orthologous sequence - C.brenneri:48 P.jiroveci:181

G0M815              	100.00%		L0PFK8              	100.00%
                    	       		L0PCW4              	8.47%
Bootstrap support for G0M815 as seed ortholog is 91%.
Bootstrap support for L0PFK8 as seed ortholog is 100%.

Group of orthologs #431. Best score 262 bits
Score difference with first non-orthologous sequence - C.brenneri:262 P.jiroveci:262

G0MV97              	100.00%		L0PG22              	100.00%
                    	       		L0PB04              	73.64%
Bootstrap support for G0MV97 as seed ortholog is 100%.
Bootstrap support for L0PG22 as seed ortholog is 100%.

Group of orthologs #432. Best score 262 bits
Score difference with first non-orthologous sequence - C.brenneri:262 P.jiroveci:262

G0MC16              	100.00%		L0PGC4              	100.00%
Bootstrap support for G0MC16 as seed ortholog is 100%.
Bootstrap support for L0PGC4 as seed ortholog is 100%.

Group of orthologs #433. Best score 261 bits
Score difference with first non-orthologous sequence - C.brenneri:261 P.jiroveci:261

G0N749              	100.00%		L0PBQ1              	100.00%
G0P856              	100.00%		
Bootstrap support for G0N749 as seed ortholog is 100%.
Bootstrap support for G0P856 as seed ortholog is 100%.
Bootstrap support for L0PBQ1 as seed ortholog is 100%.

Group of orthologs #434. Best score 261 bits
Score difference with first non-orthologous sequence - C.brenneri:203 P.jiroveci:261

G0N985              	100.00%		L0PFE9              	100.00%
G0PLP8              	97.61%		
Bootstrap support for G0N985 as seed ortholog is 100%.
Bootstrap support for L0PFE9 as seed ortholog is 100%.

Group of orthologs #435. Best score 261 bits
Score difference with first non-orthologous sequence - C.brenneri:261 P.jiroveci:104

G0NVV9              	100.00%		L0PA63              	100.00%
G0PHR0              	98.46%		
Bootstrap support for G0NVV9 as seed ortholog is 100%.
Bootstrap support for L0PA63 as seed ortholog is 91%.

Group of orthologs #436. Best score 261 bits
Score difference with first non-orthologous sequence - C.brenneri:51 P.jiroveci:105

G0NYM3              	100.00%		L0P8B4              	100.00%
G0PBI4              	71.61%		
Bootstrap support for G0NYM3 as seed ortholog is 87%.
Bootstrap support for L0P8B4 as seed ortholog is 99%.

Group of orthologs #437. Best score 261 bits
Score difference with first non-orthologous sequence - C.brenneri:261 P.jiroveci:261

G0NDJ2              	100.00%		L0P9P0              	100.00%
Bootstrap support for G0NDJ2 as seed ortholog is 100%.
Bootstrap support for L0P9P0 as seed ortholog is 100%.

Group of orthologs #438. Best score 260 bits
Score difference with first non-orthologous sequence - C.brenneri:260 P.jiroveci:260

G0NUW4              	100.00%		L0PCV1              	100.00%
G0NXU9              	99.75%		
Bootstrap support for G0NUW4 as seed ortholog is 100%.
Bootstrap support for L0PCV1 as seed ortholog is 100%.

Group of orthologs #439. Best score 260 bits
Score difference with first non-orthologous sequence - C.brenneri:103 P.jiroveci:260

G0MG00              	100.00%		L0PAF9              	100.00%
Bootstrap support for G0MG00 as seed ortholog is 99%.
Bootstrap support for L0PAF9 as seed ortholog is 100%.

Group of orthologs #440. Best score 259 bits
Score difference with first non-orthologous sequence - C.brenneri:214 P.jiroveci:180

G0NT72              	100.00%		L0PF24              	100.00%
G0P5C1              	24.60%		
G0NKH3              	23.25%		
Bootstrap support for G0NT72 as seed ortholog is 100%.
Bootstrap support for L0PF24 as seed ortholog is 100%.

Group of orthologs #441. Best score 258 bits
Score difference with first non-orthologous sequence - C.brenneri:258 P.jiroveci:217

G0P6K4              	100.00%		L0PC30              	100.00%
Bootstrap support for G0P6K4 as seed ortholog is 100%.
Bootstrap support for L0PC30 as seed ortholog is 100%.

Group of orthologs #442. Best score 257 bits
Score difference with first non-orthologous sequence - C.brenneri:257 P.jiroveci:257

G0N9P3              	100.00%		L0PF71              	100.00%
G0PMP6              	50.00%		
Bootstrap support for G0N9P3 as seed ortholog is 100%.
Bootstrap support for L0PF71 as seed ortholog is 100%.

Group of orthologs #443. Best score 257 bits
Score difference with first non-orthologous sequence - C.brenneri:257 P.jiroveci:257

G0MNH0              	100.00%		L0PCG0              	100.00%
Bootstrap support for G0MNH0 as seed ortholog is 100%.
Bootstrap support for L0PCG0 as seed ortholog is 100%.

Group of orthologs #444. Best score 257 bits
Score difference with first non-orthologous sequence - C.brenneri:257 P.jiroveci:257

G0PAA9              	100.00%		L0PES3              	100.00%
Bootstrap support for G0PAA9 as seed ortholog is 100%.
Bootstrap support for L0PES3 as seed ortholog is 100%.

Group of orthologs #445. Best score 256 bits
Score difference with first non-orthologous sequence - C.brenneri:256 P.jiroveci:256

G0NWT2              	100.00%		L0PE52              	100.00%
G0PND7              	51.31%		L0PIN5              	53.36%
Bootstrap support for G0NWT2 as seed ortholog is 100%.
Bootstrap support for L0PE52 as seed ortholog is 100%.

Group of orthologs #446. Best score 256 bits
Score difference with first non-orthologous sequence - C.brenneri:256 P.jiroveci:256

G0NR63              	100.00%		L0PC09              	100.00%
G0PJE8              	84.91%		
Bootstrap support for G0NR63 as seed ortholog is 100%.
Bootstrap support for L0PC09 as seed ortholog is 100%.

Group of orthologs #447. Best score 256 bits
Score difference with first non-orthologous sequence - C.brenneri:256 P.jiroveci:256

G0NZU1              	100.00%		L0PF73              	100.00%
Bootstrap support for G0NZU1 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #448. Best score 256 bits
Score difference with first non-orthologous sequence - C.brenneri:256 P.jiroveci:256

G0PN20              	100.00%		L0PBN6              	100.00%
Bootstrap support for G0PN20 as seed ortholog is 100%.
Bootstrap support for L0PBN6 as seed ortholog is 100%.

Group of orthologs #449. Best score 255 bits
Score difference with first non-orthologous sequence - C.brenneri:255 P.jiroveci:255

G0MLU5              	100.00%		L0PHK3              	100.00%
Bootstrap support for G0MLU5 as seed ortholog is 100%.
Bootstrap support for L0PHK3 as seed ortholog is 100%.

Group of orthologs #450. Best score 253 bits
Score difference with first non-orthologous sequence - C.brenneri:253 P.jiroveci:253

G0MDX9              	100.00%		L0P8N3              	100.00%
Bootstrap support for G0MDX9 as seed ortholog is 100%.
Bootstrap support for L0P8N3 as seed ortholog is 100%.

Group of orthologs #451. Best score 253 bits
Score difference with first non-orthologous sequence - C.brenneri:253 P.jiroveci:129

G0MLK2              	100.00%		L0PEG1              	100.00%
Bootstrap support for G0MLK2 as seed ortholog is 100%.
Bootstrap support for L0PEG1 as seed ortholog is 99%.

Group of orthologs #452. Best score 253 bits
Score difference with first non-orthologous sequence - C.brenneri:95 P.jiroveci:102

G0NG40              	100.00%		L0P9E4              	100.00%
Bootstrap support for G0NG40 as seed ortholog is 99%.
Bootstrap support for L0P9E4 as seed ortholog is 99%.

Group of orthologs #453. Best score 252 bits
Score difference with first non-orthologous sequence - C.brenneri:193 P.jiroveci:146

G0MV56              	100.00%		L0P871              	100.00%
G0PIX7              	84.00%		L0PAC4              	100.00%
Bootstrap support for G0MV56 as seed ortholog is 99%.
Bootstrap support for L0P871 as seed ortholog is 99%.
Bootstrap support for L0PAC4 as seed ortholog is 99%.

Group of orthologs #454. Best score 252 bits
Score difference with first non-orthologous sequence - C.brenneri:252 P.jiroveci:252

G0NMF8              	100.00%		L0PHI3              	100.00%
G0P5J4              	55.27%		
Bootstrap support for G0NMF8 as seed ortholog is 100%.
Bootstrap support for L0PHI3 as seed ortholog is 100%.

Group of orthologs #455. Best score 252 bits
Score difference with first non-orthologous sequence - C.brenneri:252 P.jiroveci:252

G0P7R8              	100.00%		L0PAM5              	100.00%
G0MFA3              	61.23%		
Bootstrap support for G0P7R8 as seed ortholog is 100%.
Bootstrap support for L0PAM5 as seed ortholog is 100%.

Group of orthologs #456. Best score 252 bits
Score difference with first non-orthologous sequence - C.brenneri:153 P.jiroveci:252

G0MPK6              	100.00%		L0PBP9              	100.00%
Bootstrap support for G0MPK6 as seed ortholog is 100%.
Bootstrap support for L0PBP9 as seed ortholog is 100%.

Group of orthologs #457. Best score 251 bits
Score difference with first non-orthologous sequence - C.brenneri:251 P.jiroveci:251

G0MFA1              	100.00%		L0PCY0              	100.00%
G0P7S0              	99.70%		
Bootstrap support for G0MFA1 as seed ortholog is 100%.
Bootstrap support for L0PCY0 as seed ortholog is 100%.

Group of orthologs #458. Best score 251 bits
Score difference with first non-orthologous sequence - C.brenneri:251 P.jiroveci:251

G0NWL9              	100.00%		L0PEM6              	100.00%
G0P3I4              	50.70%		
Bootstrap support for G0NWL9 as seed ortholog is 100%.
Bootstrap support for L0PEM6 as seed ortholog is 100%.

Group of orthologs #459. Best score 251 bits
Score difference with first non-orthologous sequence - C.brenneri:251 P.jiroveci:251

G0PJ14              	100.00%		L0PAM2              	100.00%
G0M798              	79.87%		
Bootstrap support for G0PJ14 as seed ortholog is 100%.
Bootstrap support for L0PAM2 as seed ortholog is 100%.

Group of orthologs #460. Best score 251 bits
Score difference with first non-orthologous sequence - C.brenneri:12 P.jiroveci:251

G0N7N3              	100.00%		L0PC75              	100.00%
Bootstrap support for G0N7N3 as seed ortholog is 68%.
Alternative seed ortholog is G0N7P4 (12 bits away from this cluster)
Bootstrap support for L0PC75 as seed ortholog is 100%.

Group of orthologs #461. Best score 251 bits
Score difference with first non-orthologous sequence - C.brenneri:251 P.jiroveci:251

G0P8J8              	100.00%		L0PFU1              	100.00%
Bootstrap support for G0P8J8 as seed ortholog is 100%.
Bootstrap support for L0PFU1 as seed ortholog is 100%.

Group of orthologs #462. Best score 250 bits
Score difference with first non-orthologous sequence - C.brenneri:250 P.jiroveci:250

B3VAC7              	100.00%		L0P9S5              	100.00%
G0NU33              	65.40%		
G0PG47              	43.46%		
Bootstrap support for B3VAC7 as seed ortholog is 100%.
Bootstrap support for L0P9S5 as seed ortholog is 100%.

Group of orthologs #463. Best score 250 bits
Score difference with first non-orthologous sequence - C.brenneri:250 P.jiroveci:250

G0N3I7              	100.00%		L0PB32              	100.00%
Bootstrap support for G0N3I7 as seed ortholog is 100%.
Bootstrap support for L0PB32 as seed ortholog is 100%.

Group of orthologs #464. Best score 248 bits
Score difference with first non-orthologous sequence - C.brenneri:248 P.jiroveci:248

G0NGZ5              	100.00%		L0PGG0              	100.00%
G0PIB9              	99.87%		
Bootstrap support for G0NGZ5 as seed ortholog is 100%.
Bootstrap support for L0PGG0 as seed ortholog is 100%.

Group of orthologs #465. Best score 248 bits
Score difference with first non-orthologous sequence - C.brenneri:248 P.jiroveci:248

G0NKQ6              	100.00%		L0PAL8              	100.00%
Bootstrap support for G0NKQ6 as seed ortholog is 100%.
Bootstrap support for L0PAL8 as seed ortholog is 100%.

Group of orthologs #466. Best score 248 bits
Score difference with first non-orthologous sequence - C.brenneri:248 P.jiroveci:248

G0NYY0              	100.00%		L0PCK3              	100.00%
Bootstrap support for G0NYY0 as seed ortholog is 100%.
Bootstrap support for L0PCK3 as seed ortholog is 100%.

Group of orthologs #467. Best score 247 bits
Score difference with first non-orthologous sequence - C.brenneri:247 P.jiroveci:126

G0MI46              	100.00%		L0PBF0              	100.00%
G0N269              	91.24%		
Bootstrap support for G0MI46 as seed ortholog is 100%.
Bootstrap support for L0PBF0 as seed ortholog is 99%.

Group of orthologs #468. Best score 247 bits
Score difference with first non-orthologous sequence - C.brenneri:90 P.jiroveci:157

B6VBN0              	100.00%		L0P876              	100.00%
Bootstrap support for B6VBN0 as seed ortholog is 99%.
Bootstrap support for L0P876 as seed ortholog is 100%.

Group of orthologs #469. Best score 247 bits
Score difference with first non-orthologous sequence - C.brenneri:247 P.jiroveci:247

G0N7C1              	100.00%		L0PBE0              	100.00%
Bootstrap support for G0N7C1 as seed ortholog is 100%.
Bootstrap support for L0PBE0 as seed ortholog is 100%.

Group of orthologs #470. Best score 247 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:162

G0N7Q2              	100.00%		L0PEF1              	100.00%
Bootstrap support for G0N7Q2 as seed ortholog is 96%.
Bootstrap support for L0PEF1 as seed ortholog is 99%.

Group of orthologs #471. Best score 246 bits
Score difference with first non-orthologous sequence - C.brenneri:246 P.jiroveci:246

G0MK78              	100.00%		L0PED5              	100.00%
Bootstrap support for G0MK78 as seed ortholog is 100%.
Bootstrap support for L0PED5 as seed ortholog is 100%.

Group of orthologs #472. Best score 246 bits
Score difference with first non-orthologous sequence - C.brenneri:246 P.jiroveci:246

G0N6F0              	100.00%		L0P8L5              	100.00%
Bootstrap support for G0N6F0 as seed ortholog is 100%.
Bootstrap support for L0P8L5 as seed ortholog is 100%.

Group of orthologs #473. Best score 245 bits
Score difference with first non-orthologous sequence - C.brenneri:245 P.jiroveci:245

G0NFG6              	100.00%		L0P9C4              	100.00%
G0NFG2              	64.87%		
Bootstrap support for G0NFG6 as seed ortholog is 100%.
Bootstrap support for L0P9C4 as seed ortholog is 100%.

Group of orthologs #474. Best score 245 bits
Score difference with first non-orthologous sequence - C.brenneri:245 P.jiroveci:161

G0MRF9              	100.00%		L0PDL6              	100.00%
Bootstrap support for G0MRF9 as seed ortholog is 100%.
Bootstrap support for L0PDL6 as seed ortholog is 100%.

Group of orthologs #475. Best score 245 bits
Score difference with first non-orthologous sequence - C.brenneri:245 P.jiroveci:245

G0PJS1              	100.00%		L0P723              	100.00%
Bootstrap support for G0PJS1 as seed ortholog is 100%.
Bootstrap support for L0P723 as seed ortholog is 100%.

Group of orthologs #476. Best score 244 bits
Score difference with first non-orthologous sequence - C.brenneri:126 P.jiroveci:244

G0NAY8              	100.00%		L0P9W3              	100.00%
G0PDG2              	98.75%		
Bootstrap support for G0NAY8 as seed ortholog is 99%.
Bootstrap support for L0P9W3 as seed ortholog is 100%.

Group of orthologs #477. Best score 244 bits
Score difference with first non-orthologous sequence - C.brenneri:244 P.jiroveci:244

G0NZG4              	100.00%		L0PBM4              	100.00%
G0PDY4              	56.45%		
Bootstrap support for G0NZG4 as seed ortholog is 100%.
Bootstrap support for L0PBM4 as seed ortholog is 100%.

Group of orthologs #478. Best score 244 bits
Score difference with first non-orthologous sequence - C.brenneri:244 P.jiroveci:244

G0MKT9              	100.00%		L0PCC1              	100.00%
Bootstrap support for G0MKT9 as seed ortholog is 100%.
Bootstrap support for L0PCC1 as seed ortholog is 100%.

Group of orthologs #479. Best score 244 bits
Score difference with first non-orthologous sequence - C.brenneri:185 P.jiroveci:244

G0NRL0              	100.00%		L0PG86              	100.00%
Bootstrap support for G0NRL0 as seed ortholog is 100%.
Bootstrap support for L0PG86 as seed ortholog is 100%.

Group of orthologs #480. Best score 243 bits
Score difference with first non-orthologous sequence - C.brenneri:243 P.jiroveci:243

G0NLI8              	100.00%		L0PG08              	100.00%
G0NPX1              	100.00%		
Bootstrap support for G0NLI8 as seed ortholog is 100%.
Bootstrap support for G0NPX1 as seed ortholog is 100%.
Bootstrap support for L0PG08 as seed ortholog is 100%.

Group of orthologs #481. Best score 243 bits
Score difference with first non-orthologous sequence - C.brenneri:243 P.jiroveci:243

G0NAZ4              	100.00%		L0PDJ2              	100.00%
Bootstrap support for G0NAZ4 as seed ortholog is 100%.
Bootstrap support for L0PDJ2 as seed ortholog is 100%.

Group of orthologs #482. Best score 243 bits
Score difference with first non-orthologous sequence - C.brenneri:243 P.jiroveci:243

G0NAB7              	100.00%		L0PGV8              	100.00%
Bootstrap support for G0NAB7 as seed ortholog is 100%.
Bootstrap support for L0PGV8 as seed ortholog is 100%.

Group of orthologs #483. Best score 243 bits
Score difference with first non-orthologous sequence - C.brenneri:243 P.jiroveci:243

G0NY13              	100.00%		L0PFS8              	100.00%
Bootstrap support for G0NY13 as seed ortholog is 100%.
Bootstrap support for L0PFS8 as seed ortholog is 100%.

Group of orthologs #484. Best score 242 bits
Score difference with first non-orthologous sequence - C.brenneri:242 P.jiroveci:242

G0NW46              	100.00%		L0PAL6              	100.00%
G0N9Y0              	99.50%		
Bootstrap support for G0NW46 as seed ortholog is 100%.
Bootstrap support for L0PAL6 as seed ortholog is 100%.

Group of orthologs #485. Best score 241 bits
Score difference with first non-orthologous sequence - C.brenneri:241 P.jiroveci:241

G0NWW8              	100.00%		L0P6P2              	100.00%
G0PE96              	100.00%		
Bootstrap support for G0NWW8 as seed ortholog is 100%.
Bootstrap support for G0PE96 as seed ortholog is 100%.
Bootstrap support for L0P6P2 as seed ortholog is 100%.

Group of orthologs #486. Best score 240 bits
Score difference with first non-orthologous sequence - C.brenneri:240 P.jiroveci:240

G0MLX2              	100.00%		L0PCH0              	100.00%
G0NIJ7              	17.19%		
G0NAA1              	6.96%		
Bootstrap support for G0MLX2 as seed ortholog is 100%.
Bootstrap support for L0PCH0 as seed ortholog is 100%.

Group of orthologs #487. Best score 240 bits
Score difference with first non-orthologous sequence - C.brenneri:58 P.jiroveci:83

G0MR45              	100.00%		L0PGE5              	100.00%
G0MR40              	54.00%		
G0MR36              	19.33%		
Bootstrap support for G0MR45 as seed ortholog is 99%.
Bootstrap support for L0PGE5 as seed ortholog is 99%.

Group of orthologs #488. Best score 240 bits
Score difference with first non-orthologous sequence - C.brenneri:240 P.jiroveci:240

G0NK17              	100.00%		L0PFK7              	100.00%
G0PC28              	33.08%		
Bootstrap support for G0NK17 as seed ortholog is 100%.
Bootstrap support for L0PFK7 as seed ortholog is 100%.

Group of orthologs #489. Best score 240 bits
Score difference with first non-orthologous sequence - C.brenneri:15 P.jiroveci:7

G0NZS0              	100.00%		L0PAI9              	100.00%
Bootstrap support for G0NZS0 as seed ortholog is 62%.
Alternative seed ortholog is G0NWR5 (15 bits away from this cluster)
Bootstrap support for L0PAI9 as seed ortholog is 46%.
Alternative seed ortholog is L0PAX8 (7 bits away from this cluster)

Group of orthologs #490. Best score 239 bits
Score difference with first non-orthologous sequence - C.brenneri:239 P.jiroveci:239

G0N4T6              	100.00%		L0PBT9              	100.00%
G0PF97              	90.93%		L0P9Y0              	46.72%
Bootstrap support for G0N4T6 as seed ortholog is 100%.
Bootstrap support for L0PBT9 as seed ortholog is 100%.

Group of orthologs #491. Best score 239 bits
Score difference with first non-orthologous sequence - C.brenneri:197 P.jiroveci:239

G0NUY5              	100.00%		L0PB03              	100.00%
G0NUY8              	36.68%		
Bootstrap support for G0NUY5 as seed ortholog is 100%.
Bootstrap support for L0PB03 as seed ortholog is 100%.

Group of orthologs #492. Best score 239 bits
Score difference with first non-orthologous sequence - C.brenneri:163 P.jiroveci:239

G0MK47              	100.00%		L0PDT4              	100.00%
Bootstrap support for G0MK47 as seed ortholog is 99%.
Bootstrap support for L0PDT4 as seed ortholog is 100%.

Group of orthologs #493. Best score 239 bits
Score difference with first non-orthologous sequence - C.brenneri:239 P.jiroveci:239

G0NFI3              	100.00%		L0PBB0              	100.00%
Bootstrap support for G0NFI3 as seed ortholog is 100%.
Bootstrap support for L0PBB0 as seed ortholog is 100%.

Group of orthologs #494. Best score 239 bits
Score difference with first non-orthologous sequence - C.brenneri:178 P.jiroveci:239

G0NU73              	100.00%		L0PEX9              	100.00%
Bootstrap support for G0NU73 as seed ortholog is 100%.
Bootstrap support for L0PEX9 as seed ortholog is 100%.

Group of orthologs #495. Best score 239 bits
Score difference with first non-orthologous sequence - C.brenneri:57 P.jiroveci:66

G0P0Z3              	100.00%		L0PB47              	100.00%
Bootstrap support for G0P0Z3 as seed ortholog is 91%.
Bootstrap support for L0PB47 as seed ortholog is 97%.

Group of orthologs #496. Best score 238 bits
Score difference with first non-orthologous sequence - C.brenneri:238 P.jiroveci:238

G0NND7              	100.00%		L0PAL9              	100.00%
G0PGI9              	100.00%		L0PBY7              	43.98%
Bootstrap support for G0NND7 as seed ortholog is 100%.
Bootstrap support for G0PGI9 as seed ortholog is 100%.
Bootstrap support for L0PAL9 as seed ortholog is 100%.

Group of orthologs #497. Best score 238 bits
Score difference with first non-orthologous sequence - C.brenneri:190 P.jiroveci:238

G0MIP1              	100.00%		L0PET2              	100.00%
                    	       		L0PAE5              	85.43%
Bootstrap support for G0MIP1 as seed ortholog is 100%.
Bootstrap support for L0PET2 as seed ortholog is 100%.

Group of orthologs #498. Best score 237 bits
Score difference with first non-orthologous sequence - C.brenneri:237 P.jiroveci:237

G0PJ78              	100.00%		L0PF79              	100.00%
G0N829              	97.67%		
Bootstrap support for G0PJ78 as seed ortholog is 100%.
Bootstrap support for L0PF79 as seed ortholog is 100%.

Group of orthologs #499. Best score 237 bits
Score difference with first non-orthologous sequence - C.brenneri:237 P.jiroveci:237

G0MG03              	100.00%		L0PD41              	100.00%
Bootstrap support for G0MG03 as seed ortholog is 100%.
Bootstrap support for L0PD41 as seed ortholog is 100%.

Group of orthologs #500. Best score 237 bits
Score difference with first non-orthologous sequence - C.brenneri:237 P.jiroveci:237

G0MIP2              	100.00%		L0PEV9              	100.00%
Bootstrap support for G0MIP2 as seed ortholog is 100%.
Bootstrap support for L0PEV9 as seed ortholog is 100%.

Group of orthologs #501. Best score 237 bits
Score difference with first non-orthologous sequence - C.brenneri:90 P.jiroveci:166

G0NFU2              	100.00%		L0PA17              	100.00%
Bootstrap support for G0NFU2 as seed ortholog is 99%.
Bootstrap support for L0PA17 as seed ortholog is 100%.

Group of orthologs #502. Best score 236 bits
Score difference with first non-orthologous sequence - C.brenneri:236 P.jiroveci:236

G0MLM1              	100.00%		L0PGD7              	100.00%
G0MHU8              	44.57%		L0PGQ0              	61.31%
Bootstrap support for G0MLM1 as seed ortholog is 100%.
Bootstrap support for L0PGD7 as seed ortholog is 100%.

Group of orthologs #503. Best score 235 bits
Score difference with first non-orthologous sequence - C.brenneri:235 P.jiroveci:58

G0NLM6              	100.00%		L0PAQ7              	100.00%
Bootstrap support for G0NLM6 as seed ortholog is 100%.
Bootstrap support for L0PAQ7 as seed ortholog is 98%.

Group of orthologs #504. Best score 234 bits
Score difference with first non-orthologous sequence - C.brenneri:234 P.jiroveci:234

G0P5P3              	100.00%		L0PCF4              	100.00%
G0NLU7              	19.01%		L0P926              	59.59%
Bootstrap support for G0P5P3 as seed ortholog is 100%.
Bootstrap support for L0PCF4 as seed ortholog is 100%.

Group of orthologs #505. Best score 234 bits
Score difference with first non-orthologous sequence - C.brenneri:165 P.jiroveci:234

G0MKA6              	100.00%		L0PDR6              	100.00%
Bootstrap support for G0MKA6 as seed ortholog is 99%.
Bootstrap support for L0PDR6 as seed ortholog is 100%.

Group of orthologs #506. Best score 234 bits
Score difference with first non-orthologous sequence - C.brenneri:72 P.jiroveci:135

G0MNJ7              	100.00%		L0PBM6              	100.00%
Bootstrap support for G0MNJ7 as seed ortholog is 91%.
Bootstrap support for L0PBM6 as seed ortholog is 99%.

Group of orthologs #507. Best score 233 bits
Score difference with first non-orthologous sequence - C.brenneri:171 P.jiroveci:144

G0NQ09              	100.00%		L0PAL2              	100.00%
Bootstrap support for G0NQ09 as seed ortholog is 100%.
Bootstrap support for L0PAL2 as seed ortholog is 99%.

Group of orthologs #508. Best score 232 bits
Score difference with first non-orthologous sequence - C.brenneri:232 P.jiroveci:232

G0MCQ3              	100.00%		L0PD44              	100.00%
Bootstrap support for G0MCQ3 as seed ortholog is 100%.
Bootstrap support for L0PD44 as seed ortholog is 100%.

Group of orthologs #509. Best score 232 bits
Score difference with first non-orthologous sequence - C.brenneri:103 P.jiroveci:232

G0MGD1              	100.00%		L0PEX1              	100.00%
Bootstrap support for G0MGD1 as seed ortholog is 99%.
Bootstrap support for L0PEX1 as seed ortholog is 100%.

Group of orthologs #510. Best score 231 bits
Score difference with first non-orthologous sequence - C.brenneri:231 P.jiroveci:231

G0NYZ9              	100.00%		L0PEY9              	100.00%
G0MYR7              	63.64%		
Bootstrap support for G0NYZ9 as seed ortholog is 100%.
Bootstrap support for L0PEY9 as seed ortholog is 100%.

Group of orthologs #511. Best score 230 bits
Score difference with first non-orthologous sequence - C.brenneri:230 P.jiroveci:89

G0MPC3              	100.00%		L0PG34              	100.00%
G0NML7              	95.14%		
G0P5H5              	94.91%		
G0PEG4              	5.67%		
Bootstrap support for G0MPC3 as seed ortholog is 100%.
Bootstrap support for L0PG34 as seed ortholog is 97%.

Group of orthologs #512. Best score 230 bits
Score difference with first non-orthologous sequence - C.brenneri:230 P.jiroveci:230

G0NBC8              	100.00%		L0PFC0              	100.00%
G0PNB5              	73.14%		
Bootstrap support for G0NBC8 as seed ortholog is 100%.
Bootstrap support for L0PFC0 as seed ortholog is 100%.

Group of orthologs #513. Best score 230 bits
Score difference with first non-orthologous sequence - C.brenneri:230 P.jiroveci:230

G0P8W8              	100.00%		L0PB61              	100.00%
G0PHN5              	99.48%		
Bootstrap support for G0P8W8 as seed ortholog is 100%.
Bootstrap support for L0PB61 as seed ortholog is 100%.

Group of orthologs #514. Best score 230 bits
Score difference with first non-orthologous sequence - C.brenneri:186 P.jiroveci:230

G0MWK6              	100.00%		L0PE61              	100.00%
Bootstrap support for G0MWK6 as seed ortholog is 100%.
Bootstrap support for L0PE61 as seed ortholog is 100%.

Group of orthologs #515. Best score 229 bits
Score difference with first non-orthologous sequence - C.brenneri:229 P.jiroveci:229

G0MXF3              	100.00%		L0PE17              	100.00%
G0PM06              	14.47%		
Bootstrap support for G0MXF3 as seed ortholog is 100%.
Bootstrap support for L0PE17 as seed ortholog is 100%.

Group of orthologs #516. Best score 229 bits
Score difference with first non-orthologous sequence - C.brenneri:229 P.jiroveci:229

G0MG82              	100.00%		L0PAD9              	100.00%
Bootstrap support for G0MG82 as seed ortholog is 100%.
Bootstrap support for L0PAD9 as seed ortholog is 100%.

Group of orthologs #517. Best score 228 bits
Score difference with first non-orthologous sequence - C.brenneri:228 P.jiroveci:228

G0MW70              	100.00%		L0P7B5              	100.00%
Bootstrap support for G0MW70 as seed ortholog is 100%.
Bootstrap support for L0P7B5 as seed ortholog is 100%.

Group of orthologs #518. Best score 228 bits
Score difference with first non-orthologous sequence - C.brenneri:228 P.jiroveci:228

G0PAK4              	100.00%		L0P9B6              	100.00%
Bootstrap support for G0PAK4 as seed ortholog is 100%.
Bootstrap support for L0P9B6 as seed ortholog is 100%.

Group of orthologs #519. Best score 226 bits
Score difference with first non-orthologous sequence - C.brenneri:226 P.jiroveci:226

G0MX15              	100.00%		L0PE74              	100.00%
G0NKN4              	20.75%		
Bootstrap support for G0MX15 as seed ortholog is 100%.
Bootstrap support for L0PE74 as seed ortholog is 100%.

Group of orthologs #520. Best score 226 bits
Score difference with first non-orthologous sequence - C.brenneri:226 P.jiroveci:152

G0N3J9              	100.00%		L0PG93              	100.00%
Bootstrap support for G0N3J9 as seed ortholog is 100%.
Bootstrap support for L0PG93 as seed ortholog is 99%.

Group of orthologs #521. Best score 226 bits
Score difference with first non-orthologous sequence - C.brenneri:135 P.jiroveci:226

G0NRN2              	100.00%		L0PH80              	100.00%
Bootstrap support for G0NRN2 as seed ortholog is 99%.
Bootstrap support for L0PH80 as seed ortholog is 100%.

Group of orthologs #522. Best score 225 bits
Score difference with first non-orthologous sequence - C.brenneri:225 P.jiroveci:225

G0MJ86              	100.00%		L0PCR8              	100.00%
                    	       		L0PH75              	91.19%
Bootstrap support for G0MJ86 as seed ortholog is 100%.
Bootstrap support for L0PCR8 as seed ortholog is 100%.

Group of orthologs #523. Best score 225 bits
Score difference with first non-orthologous sequence - C.brenneri:158 P.jiroveci:77

G0NLJ7              	100.00%		L0PAA3              	100.00%
G0NPW2              	100.00%		
Bootstrap support for G0NLJ7 as seed ortholog is 99%.
Bootstrap support for G0NPW2 as seed ortholog is 99%.
Bootstrap support for L0PAA3 as seed ortholog is 95%.

Group of orthologs #524. Best score 225 bits
Score difference with first non-orthologous sequence - C.brenneri:225 P.jiroveci:225

G0M8L4              	100.00%		L0PBV8              	100.00%
Bootstrap support for G0M8L4 as seed ortholog is 100%.
Bootstrap support for L0PBV8 as seed ortholog is 100%.

Group of orthologs #525. Best score 225 bits
Score difference with first non-orthologous sequence - C.brenneri:225 P.jiroveci:25

G0MKL7              	100.00%		L0PD43              	100.00%
Bootstrap support for G0MKL7 as seed ortholog is 100%.
Bootstrap support for L0PD43 as seed ortholog is 82%.

Group of orthologs #526. Best score 225 bits
Score difference with first non-orthologous sequence - C.brenneri:225 P.jiroveci:225

G0MWR6              	100.00%		L0PCI8              	100.00%
Bootstrap support for G0MWR6 as seed ortholog is 100%.
Bootstrap support for L0PCI8 as seed ortholog is 100%.

Group of orthologs #527. Best score 225 bits
Score difference with first non-orthologous sequence - C.brenneri:225 P.jiroveci:225

G0NYF3              	100.00%		L0PHL1              	100.00%
Bootstrap support for G0NYF3 as seed ortholog is 100%.
Bootstrap support for L0PHL1 as seed ortholog is 100%.

Group of orthologs #528. Best score 223 bits
Score difference with first non-orthologous sequence - C.brenneri:62 P.jiroveci:125

G0NLH6              	100.00%		L0PB10              	100.00%
Bootstrap support for G0NLH6 as seed ortholog is 98%.
Bootstrap support for L0PB10 as seed ortholog is 99%.

Group of orthologs #529. Best score 223 bits
Score difference with first non-orthologous sequence - C.brenneri:152 P.jiroveci:223

G0P3M5              	100.00%		L0PEM3              	100.00%
Bootstrap support for G0P3M5 as seed ortholog is 99%.
Bootstrap support for L0PEM3 as seed ortholog is 100%.

Group of orthologs #530. Best score 222 bits
Score difference with first non-orthologous sequence - C.brenneri:222 P.jiroveci:222

G0P9C0              	100.00%		L0PIV4              	100.00%
G0MQ62              	97.62%		
Bootstrap support for G0P9C0 as seed ortholog is 100%.
Bootstrap support for L0PIV4 as seed ortholog is 100%.

Group of orthologs #531. Best score 222 bits
Score difference with first non-orthologous sequence - C.brenneri:150 P.jiroveci:158

G0NUQ9              	100.00%		L0PFY7              	100.00%
Bootstrap support for G0NUQ9 as seed ortholog is 100%.
Bootstrap support for L0PFY7 as seed ortholog is 100%.

Group of orthologs #532. Best score 220 bits
Score difference with first non-orthologous sequence - C.brenneri:134 P.jiroveci:220

G0PCP7              	100.00%		L0PBD0              	100.00%
G0NJI6              	98.69%		
Bootstrap support for G0PCP7 as seed ortholog is 97%.
Bootstrap support for L0PBD0 as seed ortholog is 100%.

Group of orthologs #533. Best score 220 bits
Score difference with first non-orthologous sequence - C.brenneri:220 P.jiroveci:220

G0MGA1              	100.00%		L0PEB1              	100.00%
Bootstrap support for G0MGA1 as seed ortholog is 100%.
Bootstrap support for L0PEB1 as seed ortholog is 100%.

Group of orthologs #534. Best score 220 bits
Score difference with first non-orthologous sequence - C.brenneri:220 P.jiroveci:220

G0NK81              	100.00%		L0PDX6              	100.00%
Bootstrap support for G0NK81 as seed ortholog is 100%.
Bootstrap support for L0PDX6 as seed ortholog is 100%.

Group of orthologs #535. Best score 220 bits
Score difference with first non-orthologous sequence - C.brenneri:118 P.jiroveci:136

G0P4M8              	100.00%		L0P9F9              	100.00%
Bootstrap support for G0P4M8 as seed ortholog is 100%.
Bootstrap support for L0P9F9 as seed ortholog is 100%.

Group of orthologs #536. Best score 219 bits
Score difference with first non-orthologous sequence - C.brenneri:75 P.jiroveci:138

G0MK73              	100.00%		L0PHH9              	100.00%
Bootstrap support for G0MK73 as seed ortholog is 99%.
Bootstrap support for L0PHH9 as seed ortholog is 100%.

Group of orthologs #537. Best score 218 bits
Score difference with first non-orthologous sequence - C.brenneri:170 P.jiroveci:164

G0MQC3              	100.00%		L0P8I1              	100.00%
Bootstrap support for G0MQC3 as seed ortholog is 100%.
Bootstrap support for L0P8I1 as seed ortholog is 100%.

Group of orthologs #538. Best score 217 bits
Score difference with first non-orthologous sequence - C.brenneri:217 P.jiroveci:173

G0MFI8              	100.00%		L0PHK8              	100.00%
G0P1T7              	97.50%		
Bootstrap support for G0MFI8 as seed ortholog is 100%.
Bootstrap support for L0PHK8 as seed ortholog is 99%.

Group of orthologs #539. Best score 217 bits
Score difference with first non-orthologous sequence - C.brenneri:217 P.jiroveci:217

G0MU25              	100.00%		L0PD58              	100.00%
G0PEN5              	100.00%		
Bootstrap support for G0MU25 as seed ortholog is 100%.
Bootstrap support for G0PEN5 as seed ortholog is 100%.
Bootstrap support for L0PD58 as seed ortholog is 100%.

Group of orthologs #540. Best score 217 bits
Score difference with first non-orthologous sequence - C.brenneri:217 P.jiroveci:217

G0MYW0              	100.00%		L0P9N2              	100.00%
Bootstrap support for G0MYW0 as seed ortholog is 100%.
Bootstrap support for L0P9N2 as seed ortholog is 100%.

Group of orthologs #541. Best score 216 bits
Score difference with first non-orthologous sequence - C.brenneri:216 P.jiroveci:216

G0NAI0              	100.00%		L0P9T5              	100.00%
G0NAI6              	99.48%		
Bootstrap support for G0NAI0 as seed ortholog is 100%.
Bootstrap support for L0P9T5 as seed ortholog is 100%.

Group of orthologs #542. Best score 216 bits
Score difference with first non-orthologous sequence - C.brenneri:73 P.jiroveci:216

G0NG23              	100.00%		L0PBF6              	100.00%
Bootstrap support for G0NG23 as seed ortholog is 97%.
Bootstrap support for L0PBF6 as seed ortholog is 100%.

Group of orthologs #543. Best score 216 bits
Score difference with first non-orthologous sequence - C.brenneri:216 P.jiroveci:216

G0NU96              	100.00%		L0PCL4              	100.00%
Bootstrap support for G0NU96 as seed ortholog is 100%.
Bootstrap support for L0PCL4 as seed ortholog is 100%.

Group of orthologs #544. Best score 215 bits
Score difference with first non-orthologous sequence - C.brenneri:215 P.jiroveci:215

G0MCJ7              	100.00%		L0PAG8              	100.00%
Bootstrap support for G0MCJ7 as seed ortholog is 100%.
Bootstrap support for L0PAG8 as seed ortholog is 100%.

Group of orthologs #545. Best score 214 bits
Score difference with first non-orthologous sequence - C.brenneri:214 P.jiroveci:214

G0P9M4              	100.00%		L0P9T2              	100.00%
Bootstrap support for G0P9M4 as seed ortholog is 100%.
Bootstrap support for L0P9T2 as seed ortholog is 100%.

Group of orthologs #546. Best score 213 bits
Score difference with first non-orthologous sequence - C.brenneri:213 P.jiroveci:213

G0MV98              	100.00%		L0PHK5              	100.00%
Bootstrap support for G0MV98 as seed ortholog is 100%.
Bootstrap support for L0PHK5 as seed ortholog is 100%.

Group of orthologs #547. Best score 213 bits
Score difference with first non-orthologous sequence - C.brenneri:213 P.jiroveci:213

G0MYY8              	100.00%		L0PF44              	100.00%
Bootstrap support for G0MYY8 as seed ortholog is 100%.
Bootstrap support for L0PF44 as seed ortholog is 100%.

Group of orthologs #548. Best score 213 bits
Score difference with first non-orthologous sequence - C.brenneri:213 P.jiroveci:213

G0NDP8              	100.00%		L0PE58              	100.00%
Bootstrap support for G0NDP8 as seed ortholog is 100%.
Bootstrap support for L0PE58 as seed ortholog is 100%.

Group of orthologs #549. Best score 213 bits
Score difference with first non-orthologous sequence - C.brenneri:90 P.jiroveci:113

G0NW66              	100.00%		L0PAM8              	100.00%
Bootstrap support for G0NW66 as seed ortholog is 98%.
Bootstrap support for L0PAM8 as seed ortholog is 99%.

Group of orthologs #550. Best score 213 bits
Score difference with first non-orthologous sequence - C.brenneri:213 P.jiroveci:213

G0NWK9              	100.00%		L0PBA4              	100.00%
Bootstrap support for G0NWK9 as seed ortholog is 100%.
Bootstrap support for L0PBA4 as seed ortholog is 100%.

Group of orthologs #551. Best score 212 bits
Score difference with first non-orthologous sequence - C.brenneri:212 P.jiroveci:168

G0MGC3              	100.00%		L0P8J0              	100.00%
Bootstrap support for G0MGC3 as seed ortholog is 100%.
Bootstrap support for L0P8J0 as seed ortholog is 100%.

Group of orthologs #552. Best score 212 bits
Score difference with first non-orthologous sequence - C.brenneri:212 P.jiroveci:212

G0N1L1              	100.00%		L0PGQ4              	100.00%
Bootstrap support for G0N1L1 as seed ortholog is 100%.
Bootstrap support for L0PGQ4 as seed ortholog is 100%.

Group of orthologs #553. Best score 212 bits
Score difference with first non-orthologous sequence - C.brenneri:212 P.jiroveci:212

G0N7C9              	100.00%		L0PCU0              	100.00%
Bootstrap support for G0N7C9 as seed ortholog is 100%.
Bootstrap support for L0PCU0 as seed ortholog is 100%.

Group of orthologs #554. Best score 212 bits
Score difference with first non-orthologous sequence - C.brenneri:212 P.jiroveci:212

G0NTG6              	100.00%		L0P8T4              	100.00%
Bootstrap support for G0NTG6 as seed ortholog is 100%.
Bootstrap support for L0P8T4 as seed ortholog is 100%.

Group of orthologs #555. Best score 212 bits
Score difference with first non-orthologous sequence - C.brenneri:212 P.jiroveci:212

G0P3Z8              	100.00%		L0PEC6              	100.00%
Bootstrap support for G0P3Z8 as seed ortholog is 100%.
Bootstrap support for L0PEC6 as seed ortholog is 100%.

Group of orthologs #556. Best score 211 bits
Score difference with first non-orthologous sequence - C.brenneri:211 P.jiroveci:211

G0NTE7              	100.00%		L0PBZ6              	100.00%
G0P8S4              	100.00%		
Bootstrap support for G0NTE7 as seed ortholog is 100%.
Bootstrap support for G0P8S4 as seed ortholog is 100%.
Bootstrap support for L0PBZ6 as seed ortholog is 100%.

Group of orthologs #557. Best score 211 bits
Score difference with first non-orthologous sequence - C.brenneri:211 P.jiroveci:211

G0MZQ9              	100.00%		L0PBB3              	100.00%
Bootstrap support for G0MZQ9 as seed ortholog is 100%.
Bootstrap support for L0PBB3 as seed ortholog is 100%.

Group of orthologs #558. Best score 211 bits
Score difference with first non-orthologous sequence - C.brenneri:211 P.jiroveci:211

G0N4L5              	100.00%		L0PEC0              	100.00%
Bootstrap support for G0N4L5 as seed ortholog is 100%.
Bootstrap support for L0PEC0 as seed ortholog is 100%.

Group of orthologs #559. Best score 211 bits
Score difference with first non-orthologous sequence - C.brenneri:54 P.jiroveci:87

G0N3E9              	100.00%		L0PG51              	100.00%
Bootstrap support for G0N3E9 as seed ortholog is 99%.
Bootstrap support for L0PG51 as seed ortholog is 97%.

Group of orthologs #560. Best score 211 bits
Score difference with first non-orthologous sequence - C.brenneri:211 P.jiroveci:211

G0N6G9              	100.00%		L0PE77              	100.00%
Bootstrap support for G0N6G9 as seed ortholog is 100%.
Bootstrap support for L0PE77 as seed ortholog is 100%.

Group of orthologs #561. Best score 211 bits
Score difference with first non-orthologous sequence - C.brenneri:127 P.jiroveci:211

G0NUY4              	100.00%		L0PEQ4              	100.00%
Bootstrap support for G0NUY4 as seed ortholog is 99%.
Bootstrap support for L0PEQ4 as seed ortholog is 100%.

Group of orthologs #562. Best score 210 bits
Score difference with first non-orthologous sequence - C.brenneri:210 P.jiroveci:210

G0PAH2              	100.00%		L0PFP0              	100.00%
G0NU25              	99.40%		
G0N0S1              	56.46%		
Bootstrap support for G0PAH2 as seed ortholog is 100%.
Bootstrap support for L0PFP0 as seed ortholog is 100%.

Group of orthologs #563. Best score 210 bits
Score difference with first non-orthologous sequence - C.brenneri:9 P.jiroveci:117

G0MH91              	100.00%		L0PAL3              	100.00%
G0MH96              	7.72%		
Bootstrap support for G0MH91 as seed ortholog is 57%.
Alternative seed ortholog is G0N516 (9 bits away from this cluster)
Bootstrap support for L0PAL3 as seed ortholog is 99%.

Group of orthologs #564. Best score 210 bits
Score difference with first non-orthologous sequence - C.brenneri:97 P.jiroveci:210

G0MNT1              	100.00%		L0P863              	100.00%
G0PFE3              	99.04%		
Bootstrap support for G0MNT1 as seed ortholog is 98%.
Bootstrap support for L0P863 as seed ortholog is 100%.

Group of orthologs #565. Best score 210 bits
Score difference with first non-orthologous sequence - C.brenneri:210 P.jiroveci:210

G0MZ35              	100.00%		L0P9L7              	100.00%
G0PFZ2              	100.00%		
Bootstrap support for G0MZ35 as seed ortholog is 100%.
Bootstrap support for G0PFZ2 as seed ortholog is 100%.
Bootstrap support for L0P9L7 as seed ortholog is 100%.

Group of orthologs #566. Best score 210 bits
Score difference with first non-orthologous sequence - C.brenneri:136 P.jiroveci:210

G0NRL7              	100.00%		L0PAW4              	100.00%
G0P560              	36.72%		
Bootstrap support for G0NRL7 as seed ortholog is 100%.
Bootstrap support for L0PAW4 as seed ortholog is 100%.

Group of orthologs #567. Best score 210 bits
Score difference with first non-orthologous sequence - C.brenneri:210 P.jiroveci:210

G0P7L6              	100.00%		L0PBK1              	100.00%
G0N7C8              	92.05%		
Bootstrap support for G0P7L6 as seed ortholog is 100%.
Bootstrap support for L0PBK1 as seed ortholog is 100%.

Group of orthologs #568. Best score 210 bits
Score difference with first non-orthologous sequence - C.brenneri:92 P.jiroveci:138

G0MNG9              	100.00%		L0PHW8              	100.00%
Bootstrap support for G0MNG9 as seed ortholog is 100%.
Bootstrap support for L0PHW8 as seed ortholog is 100%.

Group of orthologs #569. Best score 210 bits
Score difference with first non-orthologous sequence - C.brenneri:210 P.jiroveci:210

G0MXU2              	100.00%		L0PB00              	100.00%
Bootstrap support for G0MXU2 as seed ortholog is 100%.
Bootstrap support for L0PB00 as seed ortholog is 100%.

Group of orthologs #570. Best score 210 bits
Score difference with first non-orthologous sequence - C.brenneri:57 P.jiroveci:104

G0PHL7              	100.00%		L0PFN2              	100.00%
Bootstrap support for G0PHL7 as seed ortholog is 100%.
Bootstrap support for L0PFN2 as seed ortholog is 100%.

Group of orthologs #571. Best score 209 bits
Score difference with first non-orthologous sequence - C.brenneri:62 P.jiroveci:76

G0P8E2              	100.00%		L0PDD3              	100.00%
G0PCS5              	100.00%		
Bootstrap support for G0P8E2 as seed ortholog is 98%.
Bootstrap support for G0PCS5 as seed ortholog is 98%.
Bootstrap support for L0PDD3 as seed ortholog is 99%.

Group of orthologs #572. Best score 209 bits
Score difference with first non-orthologous sequence - C.brenneri:209 P.jiroveci:209

G0MVN4              	100.00%		L0PGD6              	100.00%
Bootstrap support for G0MVN4 as seed ortholog is 100%.
Bootstrap support for L0PGD6 as seed ortholog is 100%.

Group of orthologs #573. Best score 209 bits
Score difference with first non-orthologous sequence - C.brenneri:209 P.jiroveci:209

G0P555              	100.00%		L0P9B4              	100.00%
Bootstrap support for G0P555 as seed ortholog is 100%.
Bootstrap support for L0P9B4 as seed ortholog is 100%.

Group of orthologs #574. Best score 208 bits
Score difference with first non-orthologous sequence - C.brenneri:87 P.jiroveci:208

G0N5N3              	100.00%		L0PDT8              	100.00%
                    	       		L0P9R2              	91.24%
Bootstrap support for G0N5N3 as seed ortholog is 99%.
Bootstrap support for L0PDT8 as seed ortholog is 100%.

Group of orthologs #575. Best score 208 bits
Score difference with first non-orthologous sequence - C.brenneri:208 P.jiroveci:208

G0MLQ9              	100.00%		L0PBS5              	100.00%
Bootstrap support for G0MLQ9 as seed ortholog is 100%.
Bootstrap support for L0PBS5 as seed ortholog is 100%.

Group of orthologs #576. Best score 208 bits
Score difference with first non-orthologous sequence - C.brenneri:208 P.jiroveci:208

G0MKC0              	100.00%		L0PF74              	100.00%
Bootstrap support for G0MKC0 as seed ortholog is 100%.
Bootstrap support for L0PF74 as seed ortholog is 100%.

Group of orthologs #577. Best score 208 bits
Score difference with first non-orthologous sequence - C.brenneri:144 P.jiroveci:208

G0MZF8              	100.00%		L0PBS3              	100.00%
Bootstrap support for G0MZF8 as seed ortholog is 99%.
Bootstrap support for L0PBS3 as seed ortholog is 100%.

Group of orthologs #578. Best score 208 bits
Score difference with first non-orthologous sequence - C.brenneri:208 P.jiroveci:208

G0PB27              	100.00%		L0P7H2              	100.00%
Bootstrap support for G0PB27 as seed ortholog is 100%.
Bootstrap support for L0P7H2 as seed ortholog is 100%.

Group of orthologs #579. Best score 207 bits
Score difference with first non-orthologous sequence - C.brenneri:207 P.jiroveci:158

G0NTE6              	100.00%		L0PHN0              	100.00%
G0PJH6              	83.30%		
Bootstrap support for G0NTE6 as seed ortholog is 100%.
Bootstrap support for L0PHN0 as seed ortholog is 99%.

Group of orthologs #580. Best score 207 bits
Score difference with first non-orthologous sequence - C.brenneri:207 P.jiroveci:207

G0PIM2              	100.00%		L0P6T8              	100.00%
G0MIX9              	98.19%		
Bootstrap support for G0PIM2 as seed ortholog is 100%.
Bootstrap support for L0P6T8 as seed ortholog is 100%.

Group of orthologs #581. Best score 206 bits
Score difference with first non-orthologous sequence - C.brenneri:206 P.jiroveci:206

G0MC89              	100.00%		L0PA05              	100.00%
Bootstrap support for G0MC89 as seed ortholog is 100%.
Bootstrap support for L0PA05 as seed ortholog is 100%.

Group of orthologs #582. Best score 206 bits
Score difference with first non-orthologous sequence - C.brenneri:206 P.jiroveci:206

G0NUV9              	100.00%		L0PAE8              	100.00%
Bootstrap support for G0NUV9 as seed ortholog is 100%.
Bootstrap support for L0PAE8 as seed ortholog is 100%.

Group of orthologs #583. Best score 205 bits
Score difference with first non-orthologous sequence - C.brenneri:164 P.jiroveci:205

G0NRA7              	100.00%		L0PDS6              	100.00%
G0NRA6              	34.90%		
G0ML86              	11.22%		
Bootstrap support for G0NRA7 as seed ortholog is 100%.
Bootstrap support for L0PDS6 as seed ortholog is 100%.

Group of orthologs #584. Best score 204 bits
Score difference with first non-orthologous sequence - C.brenneri:204 P.jiroveci:204

G0N4V7              	100.00%		L0PHL0              	100.00%
Bootstrap support for G0N4V7 as seed ortholog is 100%.
Bootstrap support for L0PHL0 as seed ortholog is 100%.

Group of orthologs #585. Best score 203 bits
Score difference with first non-orthologous sequence - C.brenneri:203 P.jiroveci:203

G0MN12              	100.00%		L0P949              	100.00%
G0PLN4              	98.60%		
Bootstrap support for G0MN12 as seed ortholog is 100%.
Bootstrap support for L0P949 as seed ortholog is 100%.

Group of orthologs #586. Best score 203 bits
Score difference with first non-orthologous sequence - C.brenneri:61 P.jiroveci:203

G0NKB7              	100.00%		L0PC02              	100.00%
G0NV11              	88.84%		
Bootstrap support for G0NKB7 as seed ortholog is 91%.
Bootstrap support for L0PC02 as seed ortholog is 100%.

Group of orthologs #587. Best score 203 bits
Score difference with first non-orthologous sequence - C.brenneri:203 P.jiroveci:203

G0PF43              	100.00%		L0P8A6              	100.00%
G0N9K7              	99.29%		
Bootstrap support for G0PF43 as seed ortholog is 100%.
Bootstrap support for L0P8A6 as seed ortholog is 100%.

Group of orthologs #588. Best score 203 bits
Score difference with first non-orthologous sequence - C.brenneri:203 P.jiroveci:203

G0PJC0              	100.00%		L0PB12              	100.00%
G0P5U0              	95.19%		
Bootstrap support for G0PJC0 as seed ortholog is 100%.
Bootstrap support for L0PB12 as seed ortholog is 100%.

Group of orthologs #589. Best score 202 bits
Score difference with first non-orthologous sequence - C.brenneri:74 P.jiroveci:202

G0P4C4              	100.00%		L0PAA8              	100.00%
Bootstrap support for G0P4C4 as seed ortholog is 99%.
Bootstrap support for L0PAA8 as seed ortholog is 100%.

Group of orthologs #590. Best score 202 bits
Score difference with first non-orthologous sequence - C.brenneri:202 P.jiroveci:202

G0NZR9              	100.00%		L0PH55              	100.00%
Bootstrap support for G0NZR9 as seed ortholog is 100%.
Bootstrap support for L0PH55 as seed ortholog is 100%.

Group of orthologs #591. Best score 201 bits
Score difference with first non-orthologous sequence - C.brenneri:17 P.jiroveci:201

G0PKA0              	100.00%		L0P7X9              	100.00%
G0MB54              	5.76%		L0PBE2              	83.04%
Bootstrap support for G0PKA0 as seed ortholog is 68%.
Alternative seed ortholog is G0P173 (17 bits away from this cluster)
Bootstrap support for L0P7X9 as seed ortholog is 100%.

Group of orthologs #592. Best score 201 bits
Score difference with first non-orthologous sequence - C.brenneri:33 P.jiroveci:201

G0MQ87              	100.00%		L0PGN2              	100.00%
G0P999              	97.07%		
Bootstrap support for G0MQ87 as seed ortholog is 78%.
Bootstrap support for L0PGN2 as seed ortholog is 100%.

Group of orthologs #593. Best score 201 bits
Score difference with first non-orthologous sequence - C.brenneri:201 P.jiroveci:201

G0PFX1              	100.00%		L0PC18              	100.00%
Bootstrap support for G0PFX1 as seed ortholog is 100%.
Bootstrap support for L0PC18 as seed ortholog is 100%.

Group of orthologs #594. Best score 200 bits
Score difference with first non-orthologous sequence - C.brenneri:154 P.jiroveci:200

G0P2F2              	100.00%		L0P9I3              	100.00%
G0PFG2              	12.09%		
G0NP03              	11.40%		
Bootstrap support for G0P2F2 as seed ortholog is 100%.
Bootstrap support for L0P9I3 as seed ortholog is 100%.

Group of orthologs #595. Best score 200 bits
Score difference with first non-orthologous sequence - C.brenneri:200 P.jiroveci:200

G0PH36              	100.00%		L0PBV6              	100.00%
G0PN01              	56.14%		
G0NM81              	46.32%		
Bootstrap support for G0PH36 as seed ortholog is 100%.
Bootstrap support for L0PBV6 as seed ortholog is 100%.

Group of orthologs #596. Best score 200 bits
Score difference with first non-orthologous sequence - C.brenneri:200 P.jiroveci:200

G0NTH8              	100.00%		L0PB11              	100.00%
G0P8Q3              	98.24%		
Bootstrap support for G0NTH8 as seed ortholog is 100%.
Bootstrap support for L0PB11 as seed ortholog is 100%.

Group of orthologs #597. Best score 200 bits
Score difference with first non-orthologous sequence - C.brenneri:100 P.jiroveci:107

G0P6L6              	100.00%		L0P7B1              	100.00%
Bootstrap support for G0P6L6 as seed ortholog is 100%.
Bootstrap support for L0P7B1 as seed ortholog is 100%.

Group of orthologs #598. Best score 199 bits
Score difference with first non-orthologous sequence - C.brenneri:199 P.jiroveci:199

G0P0S9              	100.00%		L0PGY0              	100.00%
Bootstrap support for G0P0S9 as seed ortholog is 100%.
Bootstrap support for L0PGY0 as seed ortholog is 100%.

Group of orthologs #599. Best score 198 bits
Score difference with first non-orthologous sequence - C.brenneri:198 P.jiroveci:198

G0MKR2              	100.00%		L0P914              	100.00%
G0N4I9              	68.89%		
Bootstrap support for G0MKR2 as seed ortholog is 100%.
Bootstrap support for L0P914 as seed ortholog is 100%.

Group of orthologs #600. Best score 198 bits
Score difference with first non-orthologous sequence - C.brenneri:198 P.jiroveci:198

G0MKX7              	100.00%		L0PBT0              	100.00%
Bootstrap support for G0MKX7 as seed ortholog is 100%.
Bootstrap support for L0PBT0 as seed ortholog is 100%.

Group of orthologs #601. Best score 198 bits
Score difference with first non-orthologous sequence - C.brenneri:198 P.jiroveci:198

G0NBR6              	100.00%		L0PB66              	100.00%
Bootstrap support for G0NBR6 as seed ortholog is 100%.
Bootstrap support for L0PB66 as seed ortholog is 100%.

Group of orthologs #602. Best score 198 bits
Score difference with first non-orthologous sequence - C.brenneri:198 P.jiroveci:198

G0NS68              	100.00%		L0PBE8              	100.00%
Bootstrap support for G0NS68 as seed ortholog is 100%.
Bootstrap support for L0PBE8 as seed ortholog is 100%.

Group of orthologs #603. Best score 197 bits
Score difference with first non-orthologous sequence - C.brenneri:75 P.jiroveci:95

G0P8K2              	100.00%		L0PAY4              	100.00%
G0PJN0              	100.00%		
G0PLU5              	100.00%		
G0NDA2              	98.04%		
G0P8C4              	96.08%		
Bootstrap support for G0P8K2 as seed ortholog is 99%.
Bootstrap support for G0PJN0 as seed ortholog is 99%.
Bootstrap support for G0PLU5 as seed ortholog is 99%.
Bootstrap support for L0PAY4 as seed ortholog is 100%.

Group of orthologs #604. Best score 197 bits
Score difference with first non-orthologous sequence - C.brenneri:197 P.jiroveci:197

G0MKI1              	100.00%		L0PG81              	100.00%
Bootstrap support for G0MKI1 as seed ortholog is 100%.
Bootstrap support for L0PG81 as seed ortholog is 100%.

Group of orthologs #605. Best score 196 bits
Score difference with first non-orthologous sequence - C.brenneri:51 P.jiroveci:6

G0NYC1              	100.00%		L0PCN5              	100.00%
G0NFY5              	11.11%		L0P7B6              	92.74%
G0P8Y9              	11.11%		
Bootstrap support for G0NYC1 as seed ortholog is 90%.
Bootstrap support for L0PCN5 as seed ortholog is 55%.
Alternative seed ortholog is L0PGT4 (6 bits away from this cluster)

Group of orthologs #606. Best score 195 bits
Score difference with first non-orthologous sequence - C.brenneri:64 P.jiroveci:119

G0NJK3              	100.00%		L0PIS9              	100.00%
G0NZ89              	31.28%		
G0PNL1              	14.98%		
G0NAS9              	5.73%		
G0PMH1              	5.73%		
Bootstrap support for G0NJK3 as seed ortholog is 98%.
Bootstrap support for L0PIS9 as seed ortholog is 100%.

Group of orthologs #607. Best score 195 bits
Score difference with first non-orthologous sequence - C.brenneri:195 P.jiroveci:195

G0MSQ6              	100.00%		L0PE53              	100.00%
G0NG16              	28.84%		
G0P5W6              	14.78%		
G0NH62              	14.59%		
Bootstrap support for G0MSQ6 as seed ortholog is 100%.
Bootstrap support for L0PE53 as seed ortholog is 100%.

Group of orthologs #608. Best score 195 bits
Score difference with first non-orthologous sequence - C.brenneri:195 P.jiroveci:195

G0NRY5              	100.00%		L0PDP2              	100.00%
G0NLX2              	74.58%		
Bootstrap support for G0NRY5 as seed ortholog is 100%.
Bootstrap support for L0PDP2 as seed ortholog is 100%.

Group of orthologs #609. Best score 195 bits
Score difference with first non-orthologous sequence - C.brenneri:42 P.jiroveci:195

G0MSM2              	100.00%		L0PCY2              	100.00%
Bootstrap support for G0MSM2 as seed ortholog is 88%.
Bootstrap support for L0PCY2 as seed ortholog is 100%.

Group of orthologs #610. Best score 195 bits
Score difference with first non-orthologous sequence - C.brenneri:195 P.jiroveci:195

G0PAE9              	100.00%		L0PGJ6              	100.00%
Bootstrap support for G0PAE9 as seed ortholog is 100%.
Bootstrap support for L0PGJ6 as seed ortholog is 100%.

Group of orthologs #611. Best score 193 bits
Score difference with first non-orthologous sequence - C.brenneri:193 P.jiroveci:193

G0N8F7              	100.00%		L0P9F7              	100.00%
G0PN26              	70.20%		L0PGP0              	84.26%
Bootstrap support for G0N8F7 as seed ortholog is 100%.
Bootstrap support for L0P9F7 as seed ortholog is 100%.

Group of orthologs #612. Best score 193 bits
Score difference with first non-orthologous sequence - C.brenneri:193 P.jiroveci:193

G0MN18              	100.00%		L0PFP1              	100.00%
                    	       		L0PC71              	74.45%
Bootstrap support for G0MN18 as seed ortholog is 100%.
Bootstrap support for L0PFP1 as seed ortholog is 100%.

Group of orthologs #613. Best score 193 bits
Score difference with first non-orthologous sequence - C.brenneri:193 P.jiroveci:193

G0NRK2              	100.00%		L0PDH2              	100.00%
Bootstrap support for G0NRK2 as seed ortholog is 100%.
Bootstrap support for L0PDH2 as seed ortholog is 100%.

Group of orthologs #614. Best score 193 bits
Score difference with first non-orthologous sequence - C.brenneri:18 P.jiroveci:193

G0NT46              	100.00%		L0PDB8              	100.00%
Bootstrap support for G0NT46 as seed ortholog is 70%.
Alternative seed ortholog is G0NMA0 (18 bits away from this cluster)
Bootstrap support for L0PDB8 as seed ortholog is 100%.

Group of orthologs #615. Best score 192 bits
Score difference with first non-orthologous sequence - C.brenneri:192 P.jiroveci:192

G0NV82              	100.00%		L0PH33              	100.00%
G0MM60              	99.93%		
G0MNP3              	17.74%		
Bootstrap support for G0NV82 as seed ortholog is 100%.
Bootstrap support for L0PH33 as seed ortholog is 100%.

Group of orthologs #616. Best score 192 bits
Score difference with first non-orthologous sequence - C.brenneri:192 P.jiroveci:192

G0MJM3              	100.00%		L0PAJ0              	100.00%
Bootstrap support for G0MJM3 as seed ortholog is 100%.
Bootstrap support for L0PAJ0 as seed ortholog is 100%.

Group of orthologs #617. Best score 192 bits
Score difference with first non-orthologous sequence - C.brenneri:192 P.jiroveci:192

G0MVC9              	100.00%		L0P9U1              	100.00%
Bootstrap support for G0MVC9 as seed ortholog is 100%.
Bootstrap support for L0P9U1 as seed ortholog is 100%.

Group of orthologs #618. Best score 192 bits
Score difference with first non-orthologous sequence - C.brenneri:192 P.jiroveci:192

G0N1C3              	100.00%		L0PEW5              	100.00%
Bootstrap support for G0N1C3 as seed ortholog is 100%.
Bootstrap support for L0PEW5 as seed ortholog is 100%.

Group of orthologs #619. Best score 191 bits
Score difference with first non-orthologous sequence - C.brenneri:191 P.jiroveci:191

G0N4S6              	100.00%		L0PCG1              	100.00%
Bootstrap support for G0N4S6 as seed ortholog is 100%.
Bootstrap support for L0PCG1 as seed ortholog is 100%.

Group of orthologs #620. Best score 190 bits
Score difference with first non-orthologous sequence - C.brenneri:45 P.jiroveci:190

G0MXI5              	100.00%		L0PBL5              	100.00%
G0MXI2              	72.43%		
G0PMU7              	69.62%		
G0MXI4              	65.19%		
G0PN44              	52.31%		
Bootstrap support for G0MXI5 as seed ortholog is 90%.
Bootstrap support for L0PBL5 as seed ortholog is 100%.

Group of orthologs #621. Best score 190 bits
Score difference with first non-orthologous sequence - C.brenneri:190 P.jiroveci:190

G0MRS1              	100.00%		L0PD40              	100.00%
G0MRS0              	19.25%		
Bootstrap support for G0MRS1 as seed ortholog is 100%.
Bootstrap support for L0PD40 as seed ortholog is 100%.

Group of orthologs #622. Best score 190 bits
Score difference with first non-orthologous sequence - C.brenneri:190 P.jiroveci:190

G0N6J1              	100.00%		L0PBK2              	100.00%
Bootstrap support for G0N6J1 as seed ortholog is 100%.
Bootstrap support for L0PBK2 as seed ortholog is 100%.

Group of orthologs #623. Best score 190 bits
Score difference with first non-orthologous sequence - C.brenneri:88 P.jiroveci:190

G0N9N4              	100.00%		L0PBX0              	100.00%
Bootstrap support for G0N9N4 as seed ortholog is 99%.
Bootstrap support for L0PBX0 as seed ortholog is 100%.

Group of orthologs #624. Best score 190 bits
Score difference with first non-orthologous sequence - C.brenneri:190 P.jiroveci:190

G0NFL0              	100.00%		L0P9M9              	100.00%
Bootstrap support for G0NFL0 as seed ortholog is 100%.
Bootstrap support for L0P9M9 as seed ortholog is 100%.

Group of orthologs #625. Best score 189 bits
Score difference with first non-orthologous sequence - C.brenneri:189 P.jiroveci:189

G0P9F4              	100.00%		L0P9N8              	100.00%
G0PLE1              	94.74%		
Bootstrap support for G0P9F4 as seed ortholog is 100%.
Bootstrap support for L0P9N8 as seed ortholog is 100%.

Group of orthologs #626. Best score 189 bits
Score difference with first non-orthologous sequence - C.brenneri:189 P.jiroveci:189

G0MJJ7              	100.00%		L0PCJ2              	100.00%
Bootstrap support for G0MJJ7 as seed ortholog is 100%.
Bootstrap support for L0PCJ2 as seed ortholog is 100%.

Group of orthologs #627. Best score 189 bits
Score difference with first non-orthologous sequence - C.brenneri:189 P.jiroveci:189

G0NNX1              	100.00%		L0PEI4              	100.00%
Bootstrap support for G0NNX1 as seed ortholog is 100%.
Bootstrap support for L0PEI4 as seed ortholog is 100%.

Group of orthologs #628. Best score 188 bits
Score difference with first non-orthologous sequence - C.brenneri:188 P.jiroveci:188

G0MK87              	100.00%		L0PD35              	100.00%
Bootstrap support for G0MK87 as seed ortholog is 100%.
Bootstrap support for L0PD35 as seed ortholog is 100%.

Group of orthologs #629. Best score 188 bits
Score difference with first non-orthologous sequence - C.brenneri:97 P.jiroveci:188

G0NI69              	100.00%		L0PBL3              	100.00%
Bootstrap support for G0NI69 as seed ortholog is 99%.
Bootstrap support for L0PBL3 as seed ortholog is 100%.

Group of orthologs #630. Best score 188 bits
Score difference with first non-orthologous sequence - C.brenneri:188 P.jiroveci:188

G0NRH0              	100.00%		L0PB18              	100.00%
Bootstrap support for G0NRH0 as seed ortholog is 100%.
Bootstrap support for L0PB18 as seed ortholog is 100%.

Group of orthologs #631. Best score 188 bits
Score difference with first non-orthologous sequence - C.brenneri:188 P.jiroveci:188

G0PNH6              	100.00%		L0PCB3              	100.00%
Bootstrap support for G0PNH6 as seed ortholog is 100%.
Bootstrap support for L0PCB3 as seed ortholog is 100%.

Group of orthologs #632. Best score 187 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:128

G0MIS3              	100.00%		L0PFK0              	100.00%
Bootstrap support for G0MIS3 as seed ortholog is 97%.
Bootstrap support for L0PFK0 as seed ortholog is 99%.

Group of orthologs #633. Best score 187 bits
Score difference with first non-orthologous sequence - C.brenneri:64 P.jiroveci:20

G0MPH9              	100.00%		L0PFI0              	100.00%
Bootstrap support for G0MPH9 as seed ortholog is 94%.
Bootstrap support for L0PFI0 as seed ortholog is 64%.
Alternative seed ortholog is L0PAG6 (20 bits away from this cluster)

Group of orthologs #634. Best score 187 bits
Score difference with first non-orthologous sequence - C.brenneri:187 P.jiroveci:187

G0PEJ0              	100.00%		L0PC53              	100.00%
Bootstrap support for G0PEJ0 as seed ortholog is 100%.
Bootstrap support for L0PC53 as seed ortholog is 100%.

Group of orthologs #635. Best score 186 bits
Score difference with first non-orthologous sequence - C.brenneri:186 P.jiroveci:186

G0MJJ2              	100.00%		L0PDR1              	100.00%
Bootstrap support for G0MJJ2 as seed ortholog is 100%.
Bootstrap support for L0PDR1 as seed ortholog is 100%.

Group of orthologs #636. Best score 185 bits
Score difference with first non-orthologous sequence - C.brenneri:185 P.jiroveci:185

G0ME64              	100.00%		L0PFL8              	100.00%
Bootstrap support for G0ME64 as seed ortholog is 100%.
Bootstrap support for L0PFL8 as seed ortholog is 100%.

Group of orthologs #637. Best score 185 bits
Score difference with first non-orthologous sequence - C.brenneri:88 P.jiroveci:128

G0MLW6              	100.00%		L0PCC3              	100.00%
Bootstrap support for G0MLW6 as seed ortholog is 99%.
Bootstrap support for L0PCC3 as seed ortholog is 100%.

Group of orthologs #638. Best score 185 bits
Score difference with first non-orthologous sequence - C.brenneri:51 P.jiroveci:185

G0MXN1              	100.00%		L0PAP9              	100.00%
Bootstrap support for G0MXN1 as seed ortholog is 99%.
Bootstrap support for L0PAP9 as seed ortholog is 100%.

Group of orthologs #639. Best score 185 bits
Score difference with first non-orthologous sequence - C.brenneri:54 P.jiroveci:69

G0N413              	100.00%		L0PGT3              	100.00%
Bootstrap support for G0N413 as seed ortholog is 99%.
Bootstrap support for L0PGT3 as seed ortholog is 99%.

Group of orthologs #640. Best score 183 bits
Score difference with first non-orthologous sequence - C.brenneri:183 P.jiroveci:183

G0MKJ2              	100.00%		L0PI61              	100.00%
                    	       		L0PA50              	26.82%
Bootstrap support for G0MKJ2 as seed ortholog is 100%.
Bootstrap support for L0PI61 as seed ortholog is 100%.

Group of orthologs #641. Best score 183 bits
Score difference with first non-orthologous sequence - C.brenneri:183 P.jiroveci:183

G0NFK4              	100.00%		L0PD65              	100.00%
G0MK95              	64.24%		
Bootstrap support for G0NFK4 as seed ortholog is 100%.
Bootstrap support for L0PD65 as seed ortholog is 100%.

Group of orthologs #642. Best score 183 bits
Score difference with first non-orthologous sequence - C.brenneri:183 P.jiroveci:183

G0MK53              	100.00%		L0P834              	100.00%
Bootstrap support for G0MK53 as seed ortholog is 100%.
Bootstrap support for L0P834 as seed ortholog is 100%.

Group of orthologs #643. Best score 183 bits
Score difference with first non-orthologous sequence - C.brenneri:183 P.jiroveci:120

G0NG87              	100.00%		L0P895              	100.00%
Bootstrap support for G0NG87 as seed ortholog is 100%.
Bootstrap support for L0P895 as seed ortholog is 99%.

Group of orthologs #644. Best score 182 bits
Score difference with first non-orthologous sequence - C.brenneri:182 P.jiroveci:182

G0MK32              	100.00%		L0P701              	100.00%
Bootstrap support for G0MK32 as seed ortholog is 100%.
Bootstrap support for L0P701 as seed ortholog is 100%.

Group of orthologs #645. Best score 181 bits
Score difference with first non-orthologous sequence - C.brenneri:181 P.jiroveci:181

G0MZD1              	100.00%		L0PCK9              	100.00%
G0PG96              	98.41%		
G0N4C2              	51.12%		
Bootstrap support for G0MZD1 as seed ortholog is 100%.
Bootstrap support for L0PCK9 as seed ortholog is 100%.

Group of orthologs #646. Best score 181 bits
Score difference with first non-orthologous sequence - C.brenneri:181 P.jiroveci:181

G0P1P7              	100.00%		L0PGV2              	100.00%
G0P479              	100.00%		L0PG40              	64.77%
Bootstrap support for G0P1P7 as seed ortholog is 100%.
Bootstrap support for G0P479 as seed ortholog is 100%.
Bootstrap support for L0PGV2 as seed ortholog is 100%.

Group of orthologs #647. Best score 181 bits
Score difference with first non-orthologous sequence - C.brenneri:181 P.jiroveci:181

G0MCD3              	100.00%		L0PAJ6              	100.00%
Bootstrap support for G0MCD3 as seed ortholog is 100%.
Bootstrap support for L0PAJ6 as seed ortholog is 100%.

Group of orthologs #648. Best score 181 bits
Score difference with first non-orthologous sequence - C.brenneri:181 P.jiroveci:181

G0MZW5              	100.00%		L0P919              	100.00%
Bootstrap support for G0MZW5 as seed ortholog is 100%.
Bootstrap support for L0P919 as seed ortholog is 100%.

Group of orthologs #649. Best score 181 bits
Score difference with first non-orthologous sequence - C.brenneri:181 P.jiroveci:181

G0MZ93              	100.00%		L0PEN7              	100.00%
Bootstrap support for G0MZ93 as seed ortholog is 100%.
Bootstrap support for L0PEN7 as seed ortholog is 100%.

Group of orthologs #650. Best score 181 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:95

G0N6G6              	100.00%		L0PAS2              	100.00%
Bootstrap support for G0N6G6 as seed ortholog is 99%.
Bootstrap support for L0PAS2 as seed ortholog is 99%.

Group of orthologs #651. Best score 181 bits
Score difference with first non-orthologous sequence - C.brenneri:181 P.jiroveci:181

G0NRK6              	100.00%		L0P746              	100.00%
Bootstrap support for G0NRK6 as seed ortholog is 100%.
Bootstrap support for L0P746 as seed ortholog is 100%.

Group of orthologs #652. Best score 181 bits
Score difference with first non-orthologous sequence - C.brenneri:181 P.jiroveci:181

G0PAL2              	100.00%		L0P8F0              	100.00%
Bootstrap support for G0PAL2 as seed ortholog is 100%.
Bootstrap support for L0P8F0 as seed ortholog is 100%.

Group of orthologs #653. Best score 181 bits
Score difference with first non-orthologous sequence - C.brenneri:181 P.jiroveci:181

G0PD82              	100.00%		L0P9Z4              	100.00%
Bootstrap support for G0PD82 as seed ortholog is 100%.
Bootstrap support for L0P9Z4 as seed ortholog is 100%.

Group of orthologs #654. Best score 180 bits
Score difference with first non-orthologous sequence - C.brenneri:87 P.jiroveci:180

G0NND2              	100.00%		L0P848              	100.00%
                    	       		L0P867              	90.41%
Bootstrap support for G0NND2 as seed ortholog is 98%.
Bootstrap support for L0P848 as seed ortholog is 100%.

Group of orthologs #655. Best score 180 bits
Score difference with first non-orthologous sequence - C.brenneri:73 P.jiroveci:180

G0NLU2              	100.00%		L0PIJ3              	100.00%
                    	       		L0PEP1              	84.41%
Bootstrap support for G0NLU2 as seed ortholog is 94%.
Bootstrap support for L0PIJ3 as seed ortholog is 100%.

Group of orthologs #656. Best score 180 bits
Score difference with first non-orthologous sequence - C.brenneri:180 P.jiroveci:180

G0MWN0              	100.00%		L0P9D6              	100.00%
Bootstrap support for G0MWN0 as seed ortholog is 100%.
Bootstrap support for L0P9D6 as seed ortholog is 100%.

Group of orthologs #657. Best score 180 bits
Score difference with first non-orthologous sequence - C.brenneri:180 P.jiroveci:180

G0NRK9              	100.00%		L0PA72              	100.00%
Bootstrap support for G0NRK9 as seed ortholog is 100%.
Bootstrap support for L0PA72 as seed ortholog is 100%.

Group of orthologs #658. Best score 179 bits
Score difference with first non-orthologous sequence - C.brenneri:41 P.jiroveci:115

G0MAU0              	100.00%		L0P8M4              	100.00%
G0NJI8              	27.09%		
Bootstrap support for G0MAU0 as seed ortholog is 93%.
Bootstrap support for L0P8M4 as seed ortholog is 100%.

Group of orthologs #659. Best score 179 bits
Score difference with first non-orthologous sequence - C.brenneri:179 P.jiroveci:179

G0NH80              	100.00%		L0P8K8              	100.00%
G0NVG1              	100.00%		
Bootstrap support for G0NH80 as seed ortholog is 100%.
Bootstrap support for G0NVG1 as seed ortholog is 100%.
Bootstrap support for L0P8K8 as seed ortholog is 100%.

Group of orthologs #660. Best score 179 bits
Score difference with first non-orthologous sequence - C.brenneri:80 P.jiroveci:179

G0MCQ8              	100.00%		L0PA51              	100.00%
Bootstrap support for G0MCQ8 as seed ortholog is 99%.
Bootstrap support for L0PA51 as seed ortholog is 100%.

Group of orthologs #661. Best score 179 bits
Score difference with first non-orthologous sequence - C.brenneri:92 P.jiroveci:179

G0MAT7              	100.00%		L0PF75              	100.00%
Bootstrap support for G0MAT7 as seed ortholog is 99%.
Bootstrap support for L0PF75 as seed ortholog is 100%.

Group of orthologs #662. Best score 179 bits
Score difference with first non-orthologous sequence - C.brenneri:179 P.jiroveci:179

G0N5Q0              	100.00%		L0P9Y2              	100.00%
Bootstrap support for G0N5Q0 as seed ortholog is 100%.
Bootstrap support for L0P9Y2 as seed ortholog is 100%.

Group of orthologs #663. Best score 179 bits
Score difference with first non-orthologous sequence - C.brenneri:179 P.jiroveci:179

G0NU72              	100.00%		L0P9I0              	100.00%
Bootstrap support for G0NU72 as seed ortholog is 100%.
Bootstrap support for L0P9I0 as seed ortholog is 100%.

Group of orthologs #664. Best score 178 bits
Score difference with first non-orthologous sequence - C.brenneri:178 P.jiroveci:178

G0P2Y7              	100.00%		L0PAC1              	100.00%
G0PK92              	94.85%		
Bootstrap support for G0P2Y7 as seed ortholog is 100%.
Bootstrap support for L0PAC1 as seed ortholog is 100%.

Group of orthologs #665. Best score 178 bits
Score difference with first non-orthologous sequence - C.brenneri:178 P.jiroveci:178

G0MPG3              	100.00%		L0PC20              	100.00%
Bootstrap support for G0MPG3 as seed ortholog is 100%.
Bootstrap support for L0PC20 as seed ortholog is 100%.

Group of orthologs #666. Best score 178 bits
Score difference with first non-orthologous sequence - C.brenneri:107 P.jiroveci:178

G0MZ15              	100.00%		L0P838              	100.00%
Bootstrap support for G0MZ15 as seed ortholog is 99%.
Bootstrap support for L0P838 as seed ortholog is 100%.

Group of orthologs #667. Best score 178 bits
Score difference with first non-orthologous sequence - C.brenneri:178 P.jiroveci:178

G0NPA3              	100.00%		L0P8B2              	100.00%
Bootstrap support for G0NPA3 as seed ortholog is 100%.
Bootstrap support for L0P8B2 as seed ortholog is 100%.

Group of orthologs #668. Best score 178 bits
Score difference with first non-orthologous sequence - C.brenneri:178 P.jiroveci:178

G0NR46              	100.00%		L0PEY5              	100.00%
Bootstrap support for G0NR46 as seed ortholog is 100%.
Bootstrap support for L0PEY5 as seed ortholog is 100%.

Group of orthologs #669. Best score 178 bits
Score difference with first non-orthologous sequence - C.brenneri:178 P.jiroveci:178

G0PL49              	100.00%		L0P9G1              	100.00%
Bootstrap support for G0PL49 as seed ortholog is 100%.
Bootstrap support for L0P9G1 as seed ortholog is 100%.

Group of orthologs #670. Best score 177 bits
Score difference with first non-orthologous sequence - C.brenneri:177 P.jiroveci:177

G0MF24              	100.00%		L0PCJ8              	100.00%
G0P8N7              	98.04%		
Bootstrap support for G0MF24 as seed ortholog is 100%.
Bootstrap support for L0PCJ8 as seed ortholog is 100%.

Group of orthologs #671. Best score 177 bits
Score difference with first non-orthologous sequence - C.brenneri:177 P.jiroveci:177

G0P7I5              	100.00%		L0PCZ4              	100.00%
G0MM10              	97.69%		
Bootstrap support for G0P7I5 as seed ortholog is 100%.
Bootstrap support for L0PCZ4 as seed ortholog is 100%.

Group of orthologs #672. Best score 177 bits
Score difference with first non-orthologous sequence - C.brenneri:123 P.jiroveci:177

G0N8T0              	100.00%		L0PGX9              	100.00%
Bootstrap support for G0N8T0 as seed ortholog is 99%.
Bootstrap support for L0PGX9 as seed ortholog is 100%.

Group of orthologs #673. Best score 176 bits
Score difference with first non-orthologous sequence - C.brenneri:176 P.jiroveci:176

G0M9E6              	100.00%		L0PF51              	100.00%
G0N8Y8              	66.67%		
Bootstrap support for G0M9E6 as seed ortholog is 100%.
Bootstrap support for L0PF51 as seed ortholog is 100%.

Group of orthologs #674. Best score 176 bits
Score difference with first non-orthologous sequence - C.brenneri:71 P.jiroveci:176

G0MJ44              	100.00%		L0PH42              	100.00%
Bootstrap support for G0MJ44 as seed ortholog is 95%.
Bootstrap support for L0PH42 as seed ortholog is 100%.

Group of orthologs #675. Best score 176 bits
Score difference with first non-orthologous sequence - C.brenneri:176 P.jiroveci:176

G0NE23              	100.00%		L0PDL5              	100.00%
Bootstrap support for G0NE23 as seed ortholog is 100%.
Bootstrap support for L0PDL5 as seed ortholog is 100%.

Group of orthologs #676. Best score 176 bits
Score difference with first non-orthologous sequence - C.brenneri:176 P.jiroveci:176

G0PCF6              	100.00%		L0PGE7              	100.00%
Bootstrap support for G0PCF6 as seed ortholog is 100%.
Bootstrap support for L0PGE7 as seed ortholog is 100%.

Group of orthologs #677. Best score 175 bits
Score difference with first non-orthologous sequence - C.brenneri:175 P.jiroveci:175

G0PAE7              	100.00%		L0PDI2              	100.00%
G0NYJ4              	77.29%		
Bootstrap support for G0PAE7 as seed ortholog is 100%.
Bootstrap support for L0PDI2 as seed ortholog is 100%.

Group of orthologs #678. Best score 175 bits
Score difference with first non-orthologous sequence - C.brenneri:120 P.jiroveci:175

G0PF83              	100.00%		L0PB84              	100.00%
G0MPW8              	54.62%		
Bootstrap support for G0PF83 as seed ortholog is 100%.
Bootstrap support for L0PB84 as seed ortholog is 100%.

Group of orthologs #679. Best score 175 bits
Score difference with first non-orthologous sequence - C.brenneri:108 P.jiroveci:175

G0MBT5              	100.00%		L0PAV2              	100.00%
Bootstrap support for G0MBT5 as seed ortholog is 99%.
Bootstrap support for L0PAV2 as seed ortholog is 100%.

Group of orthologs #680. Best score 175 bits
Score difference with first non-orthologous sequence - C.brenneri:175 P.jiroveci:175

G0NJI2              	100.00%		L0PC96              	100.00%
Bootstrap support for G0NJI2 as seed ortholog is 100%.
Bootstrap support for L0PC96 as seed ortholog is 100%.

Group of orthologs #681. Best score 175 bits
Score difference with first non-orthologous sequence - C.brenneri:175 P.jiroveci:175

G0P6S0              	100.00%		L0PFS1              	100.00%
Bootstrap support for G0P6S0 as seed ortholog is 100%.
Bootstrap support for L0PFS1 as seed ortholog is 100%.

Group of orthologs #682. Best score 174 bits
Score difference with first non-orthologous sequence - C.brenneri:174 P.jiroveci:30

G0P1U0              	100.00%		L0PG10              	100.00%
G0MFD5              	99.78%		
Bootstrap support for G0P1U0 as seed ortholog is 100%.
Bootstrap support for L0PG10 as seed ortholog is 79%.

Group of orthologs #683. Best score 174 bits
Score difference with first non-orthologous sequence - C.brenneri:174 P.jiroveci:174

G0MKF2              	100.00%		L0PGR5              	100.00%
Bootstrap support for G0MKF2 as seed ortholog is 100%.
Bootstrap support for L0PGR5 as seed ortholog is 100%.

Group of orthologs #684. Best score 174 bits
Score difference with first non-orthologous sequence - C.brenneri:174 P.jiroveci:66

G0MXU5              	100.00%		L0PDS3              	100.00%
Bootstrap support for G0MXU5 as seed ortholog is 100%.
Bootstrap support for L0PDS3 as seed ortholog is 97%.

Group of orthologs #685. Best score 174 bits
Score difference with first non-orthologous sequence - C.brenneri:174 P.jiroveci:125

G0N525              	100.00%		L0PGL3              	100.00%
Bootstrap support for G0N525 as seed ortholog is 100%.
Bootstrap support for L0PGL3 as seed ortholog is 99%.

Group of orthologs #686. Best score 173 bits
Score difference with first non-orthologous sequence - C.brenneri:69 P.jiroveci:173

G0N9G9              	100.00%		L0PBH0              	100.00%
                    	       		L0PGS5              	37.78%
Bootstrap support for G0N9G9 as seed ortholog is 99%.
Bootstrap support for L0PBH0 as seed ortholog is 100%.

Group of orthologs #687. Best score 173 bits
Score difference with first non-orthologous sequence - C.brenneri:173 P.jiroveci:173

G0NAW2              	100.00%		L0PD38              	100.00%
G0PKI5              	100.00%		
Bootstrap support for G0NAW2 as seed ortholog is 100%.
Bootstrap support for G0PKI5 as seed ortholog is 100%.
Bootstrap support for L0PD38 as seed ortholog is 100%.

Group of orthologs #688. Best score 173 bits
Score difference with first non-orthologous sequence - C.brenneri:173 P.jiroveci:173

G0MTP2              	100.00%		L0PFV3              	100.00%
Bootstrap support for G0MTP2 as seed ortholog is 100%.
Bootstrap support for L0PFV3 as seed ortholog is 100%.

Group of orthologs #689. Best score 172 bits
Score difference with first non-orthologous sequence - C.brenneri:172 P.jiroveci:172

G0MGE2              	100.00%		L0PD70              	100.00%
G0MGE6              	87.14%		L0P9Q7              	81.52%
G0MGD6              	81.74%		
G0MGD3              	64.83%		
Bootstrap support for G0MGE2 as seed ortholog is 100%.
Bootstrap support for L0PD70 as seed ortholog is 100%.

Group of orthologs #690. Best score 172 bits
Score difference with first non-orthologous sequence - C.brenneri:172 P.jiroveci:172

G0MIT7              	100.00%		L0PE09              	100.00%
Bootstrap support for G0MIT7 as seed ortholog is 100%.
Bootstrap support for L0PE09 as seed ortholog is 100%.

Group of orthologs #691. Best score 171 bits
Score difference with first non-orthologous sequence - C.brenneri:171 P.jiroveci:171

G0MG96              	100.00%		L0PDE4              	100.00%
Bootstrap support for G0MG96 as seed ortholog is 100%.
Bootstrap support for L0PDE4 as seed ortholog is 100%.

Group of orthologs #692. Best score 171 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:171

G0MXG7              	100.00%		L0PDB9              	100.00%
Bootstrap support for G0MXG7 as seed ortholog is 95%.
Bootstrap support for L0PDB9 as seed ortholog is 100%.

Group of orthologs #693. Best score 171 bits
Score difference with first non-orthologous sequence - C.brenneri:171 P.jiroveci:171

G0NFR2              	100.00%		L0PG43              	100.00%
Bootstrap support for G0NFR2 as seed ortholog is 100%.
Bootstrap support for L0PG43 as seed ortholog is 100%.

Group of orthologs #694. Best score 171 bits
Score difference with first non-orthologous sequence - C.brenneri:53 P.jiroveci:125

G0NRU4              	100.00%		L0PC81              	100.00%
Bootstrap support for G0NRU4 as seed ortholog is 93%.
Bootstrap support for L0PC81 as seed ortholog is 99%.

Group of orthologs #695. Best score 171 bits
Score difference with first non-orthologous sequence - C.brenneri:171 P.jiroveci:171

G0NVQ2              	100.00%		L0PFC9              	100.00%
Bootstrap support for G0NVQ2 as seed ortholog is 100%.
Bootstrap support for L0PFC9 as seed ortholog is 100%.

Group of orthologs #696. Best score 170 bits
Score difference with first non-orthologous sequence - C.brenneri:170 P.jiroveci:170

G0N3G8              	100.00%		L0PA86              	100.00%
G0NDU4              	30.80%		
Bootstrap support for G0N3G8 as seed ortholog is 100%.
Bootstrap support for L0PA86 as seed ortholog is 100%.

Group of orthologs #697. Best score 170 bits
Score difference with first non-orthologous sequence - C.brenneri:170 P.jiroveci:170

G0NR42              	100.00%		L0PCX5              	100.00%
G0NRA4              	89.00%		
Bootstrap support for G0NR42 as seed ortholog is 100%.
Bootstrap support for L0PCX5 as seed ortholog is 100%.

Group of orthologs #698. Best score 170 bits
Score difference with first non-orthologous sequence - C.brenneri:170 P.jiroveci:170

G0MKI8              	100.00%		L0PAL5              	100.00%
Bootstrap support for G0MKI8 as seed ortholog is 100%.
Bootstrap support for L0PAL5 as seed ortholog is 100%.

Group of orthologs #699. Best score 170 bits
Score difference with first non-orthologous sequence - C.brenneri:170 P.jiroveci:170

G0NW22              	100.00%		L0PBJ0              	100.00%
Bootstrap support for G0NW22 as seed ortholog is 100%.
Bootstrap support for L0PBJ0 as seed ortholog is 100%.

Group of orthologs #700. Best score 170 bits
Score difference with first non-orthologous sequence - C.brenneri:59 P.jiroveci:170

G0PCG7              	100.00%		L0PE85              	100.00%
Bootstrap support for G0PCG7 as seed ortholog is 99%.
Bootstrap support for L0PE85 as seed ortholog is 100%.

Group of orthologs #701. Best score 169 bits
Score difference with first non-orthologous sequence - C.brenneri:169 P.jiroveci:169

G0MKI9              	100.00%		L0P7L9              	100.00%
Bootstrap support for G0MKI9 as seed ortholog is 100%.
Bootstrap support for L0P7L9 as seed ortholog is 100%.

Group of orthologs #702. Best score 168 bits
Score difference with first non-orthologous sequence - C.brenneri:168 P.jiroveci:168

G0M6J7              	100.00%		L0PGF9              	100.00%
Bootstrap support for G0M6J7 as seed ortholog is 100%.
Bootstrap support for L0PGF9 as seed ortholog is 100%.

Group of orthologs #703. Best score 167 bits
Score difference with first non-orthologous sequence - C.brenneri:167 P.jiroveci:167

G0NNV7              	100.00%		L0PBX2              	100.00%
Bootstrap support for G0NNV7 as seed ortholog is 100%.
Bootstrap support for L0PBX2 as seed ortholog is 100%.

Group of orthologs #704. Best score 166 bits
Score difference with first non-orthologous sequence - C.brenneri:166 P.jiroveci:166

G0NUS8              	100.00%		L0P8P9              	100.00%
G0NLL2              	58.55%		
G0NXQ8              	52.33%		
Bootstrap support for G0NUS8 as seed ortholog is 100%.
Bootstrap support for L0P8P9 as seed ortholog is 100%.

Group of orthologs #705. Best score 166 bits
Score difference with first non-orthologous sequence - C.brenneri:166 P.jiroveci:166

G0MZT7              	100.00%		L0P8C9              	100.00%
Bootstrap support for G0MZT7 as seed ortholog is 100%.
Bootstrap support for L0P8C9 as seed ortholog is 100%.

Group of orthologs #706. Best score 166 bits
Score difference with first non-orthologous sequence - C.brenneri:166 P.jiroveci:166

G0NJT6              	100.00%		L0PG54              	100.00%
Bootstrap support for G0NJT6 as seed ortholog is 100%.
Bootstrap support for L0PG54 as seed ortholog is 100%.

Group of orthologs #707. Best score 166 bits
Score difference with first non-orthologous sequence - C.brenneri:166 P.jiroveci:166

G0P3K9              	100.00%		L0PEX0              	100.00%
Bootstrap support for G0P3K9 as seed ortholog is 100%.
Bootstrap support for L0PEX0 as seed ortholog is 100%.

Group of orthologs #708. Best score 166 bits
Score difference with first non-orthologous sequence - C.brenneri:166 P.jiroveci:166

G0PA93              	100.00%		L0P9I6              	100.00%
Bootstrap support for G0PA93 as seed ortholog is 100%.
Bootstrap support for L0P9I6 as seed ortholog is 100%.

Group of orthologs #709. Best score 166 bits
Score difference with first non-orthologous sequence - C.brenneri:166 P.jiroveci:166

G0P7W5              	100.00%		L0PFG0              	100.00%
Bootstrap support for G0P7W5 as seed ortholog is 100%.
Bootstrap support for L0PFG0 as seed ortholog is 100%.

Group of orthologs #710. Best score 165 bits
Score difference with first non-orthologous sequence - C.brenneri:43 P.jiroveci:61

G0PMA1              	100.00%		L0PE79              	100.00%
G0NZ12              	28.57%		
G0P6S6              	16.19%		
G0PB55              	8.57%		
G0N7Y0              	6.19%		
Bootstrap support for G0PMA1 as seed ortholog is 94%.
Bootstrap support for L0PE79 as seed ortholog is 99%.

Group of orthologs #711. Best score 165 bits
Score difference with first non-orthologous sequence - C.brenneri:61 P.jiroveci:165

G0MQ15              	100.00%		L0PGL1              	100.00%
G0P9V9              	90.44%		
Bootstrap support for G0MQ15 as seed ortholog is 91%.
Bootstrap support for L0PGL1 as seed ortholog is 100%.

Group of orthologs #712. Best score 165 bits
Score difference with first non-orthologous sequence - C.brenneri:103 P.jiroveci:165

G0N5L1              	100.00%		L0PF53              	100.00%
G0PB25              	16.36%		
Bootstrap support for G0N5L1 as seed ortholog is 99%.
Bootstrap support for L0PF53 as seed ortholog is 100%.

Group of orthologs #713. Best score 165 bits
Score difference with first non-orthologous sequence - C.brenneri:165 P.jiroveci:165

G0P0Z2              	100.00%		L0PC68              	100.00%
G0PEM6              	98.75%		
Bootstrap support for G0P0Z2 as seed ortholog is 100%.
Bootstrap support for L0PC68 as seed ortholog is 100%.

Group of orthologs #714. Best score 165 bits
Score difference with first non-orthologous sequence - C.brenneri:165 P.jiroveci:165

G0PMM1              	100.00%		L0PC66              	100.00%
                    	       		L0PBN8              	74.39%
Bootstrap support for G0PMM1 as seed ortholog is 100%.
Bootstrap support for L0PC66 as seed ortholog is 100%.

Group of orthologs #715. Best score 164 bits
Score difference with first non-orthologous sequence - C.brenneri:164 P.jiroveci:164

G0NIY1              	100.00%		L0PAR5              	100.00%
Bootstrap support for G0NIY1 as seed ortholog is 100%.
Bootstrap support for L0PAR5 as seed ortholog is 100%.

Group of orthologs #716. Best score 164 bits
Score difference with first non-orthologous sequence - C.brenneri:164 P.jiroveci:164

G0NVQ4              	100.00%		L0PA78              	100.00%
Bootstrap support for G0NVQ4 as seed ortholog is 100%.
Bootstrap support for L0PA78 as seed ortholog is 100%.

Group of orthologs #717. Best score 164 bits
Score difference with first non-orthologous sequence - C.brenneri:164 P.jiroveci:164

G0P4V4              	100.00%		L0PHA7              	100.00%
Bootstrap support for G0P4V4 as seed ortholog is 100%.
Bootstrap support for L0PHA7 as seed ortholog is 100%.

Group of orthologs #718. Best score 163 bits
Score difference with first non-orthologous sequence - C.brenneri:163 P.jiroveci:163

G0NHG8              	100.00%		L0PBM3              	100.00%
G0M7A0              	31.57%		
G0M799              	14.09%		
Bootstrap support for G0NHG8 as seed ortholog is 100%.
Bootstrap support for L0PBM3 as seed ortholog is 100%.

Group of orthologs #719. Best score 163 bits
Score difference with first non-orthologous sequence - C.brenneri:23 P.jiroveci:163

G0NR53              	100.00%		L0PFZ5              	100.00%
G0PIC8              	96.67%		
G0NR39              	70.56%		
Bootstrap support for G0NR53 as seed ortholog is 61%.
Alternative seed ortholog is G0NFI6 (23 bits away from this cluster)
Bootstrap support for L0PFZ5 as seed ortholog is 100%.

Group of orthologs #720. Best score 163 bits
Score difference with first non-orthologous sequence - C.brenneri:163 P.jiroveci:163

G0NVT0              	100.00%		L0P740              	100.00%
G0PC85              	100.00%		
Bootstrap support for G0NVT0 as seed ortholog is 100%.
Bootstrap support for G0PC85 as seed ortholog is 100%.
Bootstrap support for L0P740 as seed ortholog is 100%.

Group of orthologs #721. Best score 163 bits
Score difference with first non-orthologous sequence - C.brenneri:163 P.jiroveci:163

B3VAB9              	100.00%		L0PGZ5              	100.00%
Bootstrap support for B3VAB9 as seed ortholog is 100%.
Bootstrap support for L0PGZ5 as seed ortholog is 100%.

Group of orthologs #722. Best score 163 bits
Score difference with first non-orthologous sequence - C.brenneri:64 P.jiroveci:163

G0P5X7              	100.00%		L0PFQ4              	100.00%
Bootstrap support for G0P5X7 as seed ortholog is 99%.
Bootstrap support for L0PFQ4 as seed ortholog is 100%.

Group of orthologs #723. Best score 162 bits
Score difference with first non-orthologous sequence - C.brenneri:162 P.jiroveci:162

G0MJ39              	100.00%		L0PFH7              	100.00%
G0PK31              	100.00%		
Bootstrap support for G0MJ39 as seed ortholog is 100%.
Bootstrap support for G0PK31 as seed ortholog is 100%.
Bootstrap support for L0PFH7 as seed ortholog is 100%.

Group of orthologs #724. Best score 162 bits
Score difference with first non-orthologous sequence - C.brenneri:162 P.jiroveci:162

G0N5N6              	100.00%		L0PFR9              	100.00%
Bootstrap support for G0N5N6 as seed ortholog is 100%.
Bootstrap support for L0PFR9 as seed ortholog is 100%.

Group of orthologs #725. Best score 161 bits
Score difference with first non-orthologous sequence - C.brenneri:161 P.jiroveci:161

G0PIJ8              	100.00%		L0PF66              	100.00%
G0PJP7              	99.91%		
Bootstrap support for G0PIJ8 as seed ortholog is 100%.
Bootstrap support for L0PF66 as seed ortholog is 100%.

Group of orthologs #726. Best score 161 bits
Score difference with first non-orthologous sequence - C.brenneri:62 P.jiroveci:161

G0MBQ6              	100.00%		L0PAF0              	100.00%
Bootstrap support for G0MBQ6 as seed ortholog is 92%.
Bootstrap support for L0PAF0 as seed ortholog is 100%.

Group of orthologs #727. Best score 161 bits
Score difference with first non-orthologous sequence - C.brenneri:161 P.jiroveci:161

G0MEK7              	100.00%		L0PCW8              	100.00%
Bootstrap support for G0MEK7 as seed ortholog is 100%.
Bootstrap support for L0PCW8 as seed ortholog is 100%.

Group of orthologs #728. Best score 161 bits
Score difference with first non-orthologous sequence - C.brenneri:73 P.jiroveci:161

G0P0T0              	100.00%		L0PF33              	100.00%
Bootstrap support for G0P0T0 as seed ortholog is 99%.
Bootstrap support for L0PF33 as seed ortholog is 100%.

Group of orthologs #729. Best score 161 bits
Score difference with first non-orthologous sequence - C.brenneri:79 P.jiroveci:94

G0PCB6              	100.00%		L0PAZ8              	100.00%
Bootstrap support for G0PCB6 as seed ortholog is 99%.
Bootstrap support for L0PAZ8 as seed ortholog is 99%.

Group of orthologs #730. Best score 161 bits
Score difference with first non-orthologous sequence - C.brenneri:40 P.jiroveci:111

G0PHK9              	100.00%		L0PDG6              	100.00%
Bootstrap support for G0PHK9 as seed ortholog is 85%.
Bootstrap support for L0PDG6 as seed ortholog is 99%.

Group of orthologs #731. Best score 160 bits
Score difference with first non-orthologous sequence - C.brenneri:160 P.jiroveci:160

G0PEG3              	100.00%		L0PEA9              	100.00%
G0MV85              	80.60%		
Bootstrap support for G0PEG3 as seed ortholog is 100%.
Bootstrap support for L0PEA9 as seed ortholog is 100%.

Group of orthologs #732. Best score 160 bits
Score difference with first non-orthologous sequence - C.brenneri:160 P.jiroveci:160

G0NK30              	100.00%		L0P965              	100.00%
Bootstrap support for G0NK30 as seed ortholog is 100%.
Bootstrap support for L0P965 as seed ortholog is 100%.

Group of orthologs #733. Best score 160 bits
Score difference with first non-orthologous sequence - C.brenneri:160 P.jiroveci:160

G0PCJ5              	100.00%		L0P804              	100.00%
Bootstrap support for G0PCJ5 as seed ortholog is 100%.
Bootstrap support for L0P804 as seed ortholog is 100%.

Group of orthologs #734. Best score 160 bits
Score difference with first non-orthologous sequence - C.brenneri:160 P.jiroveci:160

G0P9L7              	100.00%		L0PCK8              	100.00%
Bootstrap support for G0P9L7 as seed ortholog is 100%.
Bootstrap support for L0PCK8 as seed ortholog is 100%.

Group of orthologs #735. Best score 160 bits
Score difference with first non-orthologous sequence - C.brenneri:160 P.jiroveci:160

G0PEM5              	100.00%		L0PFY9              	100.00%
Bootstrap support for G0PEM5 as seed ortholog is 100%.
Bootstrap support for L0PFY9 as seed ortholog is 100%.

Group of orthologs #736. Best score 159 bits
Score difference with first non-orthologous sequence - C.brenneri:87 P.jiroveci:159

G0P736              	100.00%		L0PBM0              	100.00%
G0MFE6              	93.46%		
Bootstrap support for G0P736 as seed ortholog is 99%.
Bootstrap support for L0PBM0 as seed ortholog is 100%.

Group of orthologs #737. Best score 159 bits
Score difference with first non-orthologous sequence - C.brenneri:159 P.jiroveci:159

G0P9C4              	100.00%		L0PA22              	100.00%
Bootstrap support for G0P9C4 as seed ortholog is 100%.
Bootstrap support for L0PA22 as seed ortholog is 100%.

Group of orthologs #738. Best score 159 bits
Score difference with first non-orthologous sequence - C.brenneri:93 P.jiroveci:159

G0PIT7              	100.00%		L0PFZ1              	100.00%
Bootstrap support for G0PIT7 as seed ortholog is 99%.
Bootstrap support for L0PFZ1 as seed ortholog is 100%.

Group of orthologs #739. Best score 158 bits
Score difference with first non-orthologous sequence - C.brenneri:158 P.jiroveci:158

G0NPS7              	100.00%		L0PBR7              	100.00%
G0NNK0              	95.12%		
G0PJM6              	93.90%		
G0MF69              	91.46%		
G0MRW8              	91.46%		
G0MP62              	91.46%		
G0PMW6              	90.24%		
G0PCR2              	87.80%		
G0NDA6              	36.59%		
Bootstrap support for G0NPS7 as seed ortholog is 100%.
Bootstrap support for L0PBR7 as seed ortholog is 100%.

Group of orthologs #740. Best score 158 bits
Score difference with first non-orthologous sequence - C.brenneri:158 P.jiroveci:158

G0PMZ5              	100.00%		L0PB81              	100.00%
Bootstrap support for G0PMZ5 as seed ortholog is 100%.
Bootstrap support for L0PB81 as seed ortholog is 100%.

Group of orthologs #741. Best score 157 bits
Score difference with first non-orthologous sequence - C.brenneri:157 P.jiroveci:157

G0NVU8              	100.00%		L0PFM7              	100.00%
G0PJG1              	93.75%		
G0PNA8              	80.77%		
Bootstrap support for G0NVU8 as seed ortholog is 100%.
Bootstrap support for L0PFM7 as seed ortholog is 100%.

Group of orthologs #742. Best score 157 bits
Score difference with first non-orthologous sequence - C.brenneri:157 P.jiroveci:157

G0NAY0              	100.00%		L0P8Y0              	100.00%
G0PDH1              	100.00%		
Bootstrap support for G0NAY0 as seed ortholog is 100%.
Bootstrap support for G0PDH1 as seed ortholog is 100%.
Bootstrap support for L0P8Y0 as seed ortholog is 100%.

Group of orthologs #743. Best score 157 bits
Score difference with first non-orthologous sequence - C.brenneri:157 P.jiroveci:157

G0MRG4              	100.00%		L0PCI0              	100.00%
Bootstrap support for G0MRG4 as seed ortholog is 100%.
Bootstrap support for L0PCI0 as seed ortholog is 100%.

Group of orthologs #744. Best score 157 bits
Score difference with first non-orthologous sequence - C.brenneri:157 P.jiroveci:157

G0NLP4              	100.00%		L0PC06              	100.00%
Bootstrap support for G0NLP4 as seed ortholog is 100%.
Bootstrap support for L0PC06 as seed ortholog is 100%.

Group of orthologs #745. Best score 157 bits
Score difference with first non-orthologous sequence - C.brenneri:157 P.jiroveci:157

G0P0Z0              	100.00%		L0P7Z9              	100.00%
Bootstrap support for G0P0Z0 as seed ortholog is 100%.
Bootstrap support for L0P7Z9 as seed ortholog is 100%.

Group of orthologs #746. Best score 156 bits
Score difference with first non-orthologous sequence - C.brenneri:25 P.jiroveci:156

G0NR32              	100.00%		L0PBM9              	100.00%
G0NR03              	84.04%		
Bootstrap support for G0NR32 as seed ortholog is 69%.
Alternative seed ortholog is G0MGA7 (25 bits away from this cluster)
Bootstrap support for L0PBM9 as seed ortholog is 100%.

Group of orthologs #747. Best score 156 bits
Score difference with first non-orthologous sequence - C.brenneri:111 P.jiroveci:156

G0N6K8              	100.00%		L0P839              	100.00%
Bootstrap support for G0N6K8 as seed ortholog is 99%.
Bootstrap support for L0P839 as seed ortholog is 100%.

Group of orthologs #748. Best score 156 bits
Score difference with first non-orthologous sequence - C.brenneri:156 P.jiroveci:156

G0NTG8              	100.00%		L0PA27              	100.00%
Bootstrap support for G0NTG8 as seed ortholog is 100%.
Bootstrap support for L0PA27 as seed ortholog is 100%.

Group of orthologs #749. Best score 155 bits
Score difference with first non-orthologous sequence - C.brenneri:155 P.jiroveci:155

G0MND4              	100.00%		L0PA48              	100.00%
G0NQ45              	96.74%		
Bootstrap support for G0MND4 as seed ortholog is 100%.
Bootstrap support for L0PA48 as seed ortholog is 100%.

Group of orthologs #750. Best score 155 bits
Score difference with first non-orthologous sequence - C.brenneri:155 P.jiroveci:111

G0NGS4              	100.00%		L0PC80              	100.00%
Bootstrap support for G0NGS4 as seed ortholog is 100%.
Bootstrap support for L0PC80 as seed ortholog is 100%.

Group of orthologs #751. Best score 155 bits
Score difference with first non-orthologous sequence - C.brenneri:155 P.jiroveci:155

G0P2F6              	100.00%		L0PAB8              	100.00%
Bootstrap support for G0P2F6 as seed ortholog is 100%.
Bootstrap support for L0PAB8 as seed ortholog is 100%.

Group of orthologs #752. Best score 155 bits
Score difference with first non-orthologous sequence - C.brenneri:155 P.jiroveci:155

G0NYC6              	100.00%		L0PEG0              	100.00%
Bootstrap support for G0NYC6 as seed ortholog is 100%.
Bootstrap support for L0PEG0 as seed ortholog is 100%.

Group of orthologs #753. Best score 154 bits
Score difference with first non-orthologous sequence - C.brenneri:154 P.jiroveci:154

G0MPZ7              	100.00%		L0PDJ4              	100.00%
G0PE42              	72.63%		
Bootstrap support for G0MPZ7 as seed ortholog is 100%.
Bootstrap support for L0PDJ4 as seed ortholog is 100%.

Group of orthologs #754. Best score 154 bits
Score difference with first non-orthologous sequence - C.brenneri:72 P.jiroveci:154

G0MSI3              	100.00%		L0PDE1              	100.00%
G0N4R5              	10.67%		
Bootstrap support for G0MSI3 as seed ortholog is 97%.
Bootstrap support for L0PDE1 as seed ortholog is 100%.

Group of orthologs #755. Best score 154 bits
Score difference with first non-orthologous sequence - C.brenneri:68 P.jiroveci:154

G0MGP4              	100.00%		L0PBF9              	100.00%
Bootstrap support for G0MGP4 as seed ortholog is 97%.
Bootstrap support for L0PBF9 as seed ortholog is 100%.

Group of orthologs #756. Best score 154 bits
Score difference with first non-orthologous sequence - C.brenneri:154 P.jiroveci:154

G0NXX8              	100.00%		L0PBI9              	100.00%
Bootstrap support for G0NXX8 as seed ortholog is 100%.
Bootstrap support for L0PBI9 as seed ortholog is 100%.

Group of orthologs #757. Best score 153 bits
Score difference with first non-orthologous sequence - C.brenneri:153 P.jiroveci:153

B6VBL5              	100.00%		L0PBD4              	100.00%
G0P4Z1              	100.00%		
Bootstrap support for B6VBL5 as seed ortholog is 100%.
Bootstrap support for G0P4Z1 as seed ortholog is 100%.
Bootstrap support for L0PBD4 as seed ortholog is 100%.

Group of orthologs #758. Best score 153 bits
Score difference with first non-orthologous sequence - C.brenneri:153 P.jiroveci:153

G0N0M2              	100.00%		L0P8S1              	100.00%
G0MVN6              	7.64%		
Bootstrap support for G0N0M2 as seed ortholog is 100%.
Bootstrap support for L0P8S1 as seed ortholog is 100%.

Group of orthologs #759. Best score 153 bits
Score difference with first non-orthologous sequence - C.brenneri:153 P.jiroveci:153

G0PB66              	100.00%		L0PDJ6              	100.00%
G0P6Q7              	72.08%		
Bootstrap support for G0PB66 as seed ortholog is 100%.
Bootstrap support for L0PDJ6 as seed ortholog is 100%.

Group of orthologs #760. Best score 153 bits
Score difference with first non-orthologous sequence - C.brenneri:153 P.jiroveci:153

G0ME48              	100.00%		L0PBZ1              	100.00%
Bootstrap support for G0ME48 as seed ortholog is 100%.
Bootstrap support for L0PBZ1 as seed ortholog is 100%.

Group of orthologs #761. Best score 152 bits
Score difference with first non-orthologous sequence - C.brenneri:152 P.jiroveci:152

G0MSE6              	100.00%		L0PGK0              	100.00%
G0MSE5              	92.88%		
Bootstrap support for G0MSE6 as seed ortholog is 100%.
Bootstrap support for L0PGK0 as seed ortholog is 100%.

Group of orthologs #762. Best score 152 bits
Score difference with first non-orthologous sequence - C.brenneri:152 P.jiroveci:152

G0MMA6              	100.00%		L0PC70              	100.00%
Bootstrap support for G0MMA6 as seed ortholog is 100%.
Bootstrap support for L0PC70 as seed ortholog is 100%.

Group of orthologs #763. Best score 152 bits
Score difference with first non-orthologous sequence - C.brenneri:152 P.jiroveci:152

G0N3K5              	100.00%		L0PCU5              	100.00%
Bootstrap support for G0N3K5 as seed ortholog is 100%.
Bootstrap support for L0PCU5 as seed ortholog is 100%.

Group of orthologs #764. Best score 152 bits
Score difference with first non-orthologous sequence - C.brenneri:152 P.jiroveci:152

G0N6L4              	100.00%		L0PEA1              	100.00%
Bootstrap support for G0N6L4 as seed ortholog is 100%.
Bootstrap support for L0PEA1 as seed ortholog is 100%.

Group of orthologs #765. Best score 152 bits
Score difference with first non-orthologous sequence - C.brenneri:152 P.jiroveci:152

G0NGW4              	100.00%		L0P9W6              	100.00%
Bootstrap support for G0NGW4 as seed ortholog is 100%.
Bootstrap support for L0P9W6 as seed ortholog is 100%.

Group of orthologs #766. Best score 152 bits
Score difference with first non-orthologous sequence - C.brenneri:152 P.jiroveci:152

G0PG01              	100.00%		L0P8P5              	100.00%
Bootstrap support for G0PG01 as seed ortholog is 100%.
Bootstrap support for L0P8P5 as seed ortholog is 100%.

Group of orthologs #767. Best score 151 bits
Score difference with first non-orthologous sequence - C.brenneri:151 P.jiroveci:151

G0NLE5              	100.00%		L0PBH8              	100.00%
G0NQ07              	80.90%		
Bootstrap support for G0NLE5 as seed ortholog is 100%.
Bootstrap support for L0PBH8 as seed ortholog is 100%.

Group of orthologs #768. Best score 151 bits
Score difference with first non-orthologous sequence - C.brenneri:151 P.jiroveci:151

G0P6Y1              	100.00%		L0P9K2              	100.00%
G0NYG3              	90.96%		
Bootstrap support for G0P6Y1 as seed ortholog is 100%.
Bootstrap support for L0P9K2 as seed ortholog is 100%.

Group of orthologs #769. Best score 151 bits
Score difference with first non-orthologous sequence - C.brenneri:65 P.jiroveci:151

G0PBY7              	100.00%		L0PE03              	100.00%
G0NUL9              	97.58%		
Bootstrap support for G0PBY7 as seed ortholog is 98%.
Bootstrap support for L0PE03 as seed ortholog is 100%.

Group of orthologs #770. Best score 151 bits
Score difference with first non-orthologous sequence - C.brenneri:151 P.jiroveci:151

G0MPG5              	100.00%		L0PCA8              	100.00%
Bootstrap support for G0MPG5 as seed ortholog is 100%.
Bootstrap support for L0PCA8 as seed ortholog is 100%.

Group of orthologs #771. Best score 151 bits
Score difference with first non-orthologous sequence - C.brenneri:151 P.jiroveci:151

G0MZU4              	100.00%		L0PET8              	100.00%
Bootstrap support for G0MZU4 as seed ortholog is 100%.
Bootstrap support for L0PET8 as seed ortholog is 100%.

Group of orthologs #772. Best score 151 bits
Score difference with first non-orthologous sequence - C.brenneri:103 P.jiroveci:75

G0N5K8              	100.00%		L0PEH9              	100.00%
Bootstrap support for G0N5K8 as seed ortholog is 99%.
Bootstrap support for L0PEH9 as seed ortholog is 98%.

Group of orthologs #773. Best score 151 bits
Score difference with first non-orthologous sequence - C.brenneri:85 P.jiroveci:80

G0NTD3              	100.00%		L0P9T6              	100.00%
Bootstrap support for G0NTD3 as seed ortholog is 99%.
Bootstrap support for L0P9T6 as seed ortholog is 99%.

Group of orthologs #774. Best score 151 bits
Score difference with first non-orthologous sequence - C.brenneri:151 P.jiroveci:151

G0NQR9              	100.00%		L0PE43              	100.00%
Bootstrap support for G0NQR9 as seed ortholog is 100%.
Bootstrap support for L0PE43 as seed ortholog is 100%.

Group of orthologs #775. Best score 151 bits
Score difference with first non-orthologous sequence - C.brenneri:151 P.jiroveci:151

G0P8I1              	100.00%		L0PEK7              	100.00%
Bootstrap support for G0P8I1 as seed ortholog is 100%.
Bootstrap support for L0PEK7 as seed ortholog is 100%.

Group of orthologs #776. Best score 151 bits
Score difference with first non-orthologous sequence - C.brenneri:151 P.jiroveci:151

G0PEW9              	100.00%		L0PFW9              	100.00%
Bootstrap support for G0PEW9 as seed ortholog is 100%.
Bootstrap support for L0PFW9 as seed ortholog is 100%.

Group of orthologs #777. Best score 150 bits
Score difference with first non-orthologous sequence - C.brenneri:150 P.jiroveci:150

G0PJ24              	100.00%		L0P8D9              	100.00%
G0P0X6              	99.43%		
Bootstrap support for G0PJ24 as seed ortholog is 100%.
Bootstrap support for L0P8D9 as seed ortholog is 100%.

Group of orthologs #778. Best score 149 bits
Score difference with first non-orthologous sequence - C.brenneri:21 P.jiroveci:149

G0M6M7              	100.00%		L0P7E9              	100.00%
Bootstrap support for G0M6M7 as seed ortholog is 79%.
Bootstrap support for L0P7E9 as seed ortholog is 100%.

Group of orthologs #779. Best score 149 bits
Score difference with first non-orthologous sequence - C.brenneri:149 P.jiroveci:149

G0N3J2              	100.00%		L0P7S0              	100.00%
Bootstrap support for G0N3J2 as seed ortholog is 100%.
Bootstrap support for L0P7S0 as seed ortholog is 100%.

Group of orthologs #780. Best score 149 bits
Score difference with first non-orthologous sequence - C.brenneri:149 P.jiroveci:149

G0N0Y9              	100.00%		L0PFX5              	100.00%
Bootstrap support for G0N0Y9 as seed ortholog is 100%.
Bootstrap support for L0PFX5 as seed ortholog is 100%.

Group of orthologs #781. Best score 148 bits
Score difference with first non-orthologous sequence - C.brenneri:148 P.jiroveci:148

G0MIV6              	100.00%		L0PAH1              	100.00%
G0PAT2              	100.00%		
Bootstrap support for G0MIV6 as seed ortholog is 100%.
Bootstrap support for G0PAT2 as seed ortholog is 100%.
Bootstrap support for L0PAH1 as seed ortholog is 100%.

Group of orthologs #782. Best score 148 bits
Score difference with first non-orthologous sequence - C.brenneri:148 P.jiroveci:148

G0NG60              	100.00%		L0PAB3              	100.00%
G0P253              	100.00%		
Bootstrap support for G0NG60 as seed ortholog is 100%.
Bootstrap support for G0P253 as seed ortholog is 100%.
Bootstrap support for L0PAB3 as seed ortholog is 100%.

Group of orthologs #783. Best score 148 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:148

G0PBD3              	100.00%		L0PCJ5              	100.00%
G0PHG9              	44.51%		
Bootstrap support for G0PBD3 as seed ortholog is 98%.
Bootstrap support for L0PCJ5 as seed ortholog is 100%.

Group of orthologs #784. Best score 148 bits
Score difference with first non-orthologous sequence - C.brenneri:148 P.jiroveci:148

G0MS23              	100.00%		L0PDP9              	100.00%
Bootstrap support for G0MS23 as seed ortholog is 100%.
Bootstrap support for L0PDP9 as seed ortholog is 100%.

Group of orthologs #785. Best score 148 bits
Score difference with first non-orthologous sequence - C.brenneri:148 P.jiroveci:148

G0NCL2              	100.00%		L0P9N4              	100.00%
Bootstrap support for G0NCL2 as seed ortholog is 100%.
Bootstrap support for L0P9N4 as seed ortholog is 100%.

Group of orthologs #786. Best score 147 bits
Score difference with first non-orthologous sequence - C.brenneri:147 P.jiroveci:147

G0MQX4              	100.00%		L0PDS2              	100.00%
Bootstrap support for G0MQX4 as seed ortholog is 100%.
Bootstrap support for L0PDS2 as seed ortholog is 100%.

Group of orthologs #787. Best score 147 bits
Score difference with first non-orthologous sequence - C.brenneri:147 P.jiroveci:147

G0NYD8              	100.00%		L0PFL0              	100.00%
Bootstrap support for G0NYD8 as seed ortholog is 100%.
Bootstrap support for L0PFL0 as seed ortholog is 100%.

Group of orthologs #788. Best score 146 bits
Score difference with first non-orthologous sequence - C.brenneri:10 P.jiroveci:146

G0N4V6              	100.00%		L0PEN4              	100.00%
G0M9A5              	40.62%		
G0N7M8              	11.18%		
G0N5Q4              	6.49%		
Bootstrap support for G0N4V6 as seed ortholog is 53%.
Alternative seed ortholog is G0N0Z6 (10 bits away from this cluster)
Bootstrap support for L0PEN4 as seed ortholog is 100%.

Group of orthologs #789. Best score 146 bits
Score difference with first non-orthologous sequence - C.brenneri:146 P.jiroveci:146

G0P4P9              	100.00%		L0PHT7              	100.00%
G0P2V3              	65.86%		
G0P3Q9              	17.98%		
G0PGP2              	8.28%		
Bootstrap support for G0P4P9 as seed ortholog is 100%.
Bootstrap support for L0PHT7 as seed ortholog is 100%.

Group of orthologs #790. Best score 146 bits
Score difference with first non-orthologous sequence - C.brenneri:15 P.jiroveci:106

G0MEZ8              	100.00%		L0PFW7              	100.00%
G0PCH4              	85.48%		
G0NGB2              	59.74%		
Bootstrap support for G0MEZ8 as seed ortholog is 90%.
Bootstrap support for L0PFW7 as seed ortholog is 99%.

Group of orthologs #791. Best score 146 bits
Score difference with first non-orthologous sequence - C.brenneri:146 P.jiroveci:146

G0PB64              	100.00%		L0PDL8              	100.00%
                    	       		L0PD52              	91.18%
Bootstrap support for G0PB64 as seed ortholog is 100%.
Bootstrap support for L0PDL8 as seed ortholog is 100%.

Group of orthologs #792. Best score 146 bits
Score difference with first non-orthologous sequence - C.brenneri:146 P.jiroveci:146

G0N0F2              	100.00%		L0P9S4              	100.00%
Bootstrap support for G0N0F2 as seed ortholog is 100%.
Bootstrap support for L0P9S4 as seed ortholog is 100%.

Group of orthologs #793. Best score 146 bits
Score difference with first non-orthologous sequence - C.brenneri:146 P.jiroveci:146

G0MZH4              	100.00%		L0PBU7              	100.00%
Bootstrap support for G0MZH4 as seed ortholog is 100%.
Bootstrap support for L0PBU7 as seed ortholog is 100%.

Group of orthologs #794. Best score 146 bits
Score difference with first non-orthologous sequence - C.brenneri:20 P.jiroveci:146

G0N6L3              	100.00%		L0PG65              	100.00%
Bootstrap support for G0N6L3 as seed ortholog is 65%.
Alternative seed ortholog is G0PM67 (20 bits away from this cluster)
Bootstrap support for L0PG65 as seed ortholog is 100%.

Group of orthologs #795. Best score 146 bits
Score difference with first non-orthologous sequence - C.brenneri:146 P.jiroveci:146

G0PMV7              	100.00%		L0PDH1              	100.00%
Bootstrap support for G0PMV7 as seed ortholog is 100%.
Bootstrap support for L0PDH1 as seed ortholog is 100%.

Group of orthologs #796. Best score 145 bits
Score difference with first non-orthologous sequence - C.brenneri:145 P.jiroveci:145

G0MKT4              	100.00%		L0PEB9              	100.00%
                    	       		L0PA79              	59.86%
Bootstrap support for G0MKT4 as seed ortholog is 100%.
Bootstrap support for L0PEB9 as seed ortholog is 100%.

Group of orthologs #797. Best score 144 bits
Score difference with first non-orthologous sequence - C.brenneri:144 P.jiroveci:144

G0PNR5              	100.00%		L0P9G0              	100.00%
G0NRV2              	49.86%		
G0MYN1              	9.32%		
G0N3X3              	9.25%		
G0PIK1              	9.11%		
G0PFQ8              	7.30%		
Bootstrap support for G0PNR5 as seed ortholog is 100%.
Bootstrap support for L0P9G0 as seed ortholog is 100%.

Group of orthologs #798. Best score 144 bits
Score difference with first non-orthologous sequence - C.brenneri:144 P.jiroveci:144

G0N9R2              	100.00%		L0PG84              	100.00%
G0PL23              	98.97%		
Bootstrap support for G0N9R2 as seed ortholog is 100%.
Bootstrap support for L0PG84 as seed ortholog is 100%.

Group of orthologs #799. Best score 143 bits
Score difference with first non-orthologous sequence - C.brenneri:143 P.jiroveci:143

G0NZU5              	100.00%		L0PC60              	100.00%
G0MZ14              	87.14%		L0P8Z0              	54.31%
Bootstrap support for G0NZU5 as seed ortholog is 100%.
Bootstrap support for L0PC60 as seed ortholog is 100%.

Group of orthologs #800. Best score 143 bits
Score difference with first non-orthologous sequence - C.brenneri:143 P.jiroveci:143

G0N0E8              	100.00%		L0P910              	100.00%
Bootstrap support for G0N0E8 as seed ortholog is 100%.
Bootstrap support for L0P910 as seed ortholog is 100%.

Group of orthologs #801. Best score 143 bits
Score difference with first non-orthologous sequence - C.brenneri:143 P.jiroveci:143

G0N5G2              	100.00%		L0P963              	100.00%
Bootstrap support for G0N5G2 as seed ortholog is 100%.
Bootstrap support for L0P963 as seed ortholog is 100%.

Group of orthologs #802. Best score 143 bits
Score difference with first non-orthologous sequence - C.brenneri:143 P.jiroveci:143

G0NUK9              	100.00%		L0PFD7              	100.00%
Bootstrap support for G0NUK9 as seed ortholog is 100%.
Bootstrap support for L0PFD7 as seed ortholog is 100%.

Group of orthologs #803. Best score 142 bits
Score difference with first non-orthologous sequence - C.brenneri:142 P.jiroveci:142

G0MM91              	100.00%		L0PC24              	100.00%
G0PCN2              	100.00%		
Bootstrap support for G0MM91 as seed ortholog is 100%.
Bootstrap support for G0PCN2 as seed ortholog is 100%.
Bootstrap support for L0PC24 as seed ortholog is 100%.

Group of orthologs #804. Best score 142 bits
Score difference with first non-orthologous sequence - C.brenneri:142 P.jiroveci:142

G0N935              	100.00%		L0P9G8              	100.00%
                    	       		L0PDI0              	55.45%
Bootstrap support for G0N935 as seed ortholog is 100%.
Bootstrap support for L0P9G8 as seed ortholog is 100%.

Group of orthologs #805. Best score 142 bits
Score difference with first non-orthologous sequence - C.brenneri:142 P.jiroveci:142

G0PD01              	100.00%		L0PGW6              	100.00%
G0PDB7              	100.00%		
Bootstrap support for G0PD01 as seed ortholog is 100%.
Bootstrap support for G0PDB7 as seed ortholog is 100%.
Bootstrap support for L0PGW6 as seed ortholog is 100%.

Group of orthologs #806. Best score 141 bits
Score difference with first non-orthologous sequence - C.brenneri:141 P.jiroveci:141

G0NWB7              	100.00%		L0P912              	100.00%
                    	       		L0P908              	90.41%
Bootstrap support for G0NWB7 as seed ortholog is 100%.
Bootstrap support for L0P912 as seed ortholog is 100%.

Group of orthologs #807. Best score 141 bits
Score difference with first non-orthologous sequence - C.brenneri:71 P.jiroveci:141

G0MC41              	100.00%		L0PEJ9              	100.00%
Bootstrap support for G0MC41 as seed ortholog is 95%.
Bootstrap support for L0PEJ9 as seed ortholog is 100%.

Group of orthologs #808. Best score 141 bits
Score difference with first non-orthologous sequence - C.brenneri:141 P.jiroveci:141

G0P8S2              	100.00%		L0PD11              	100.00%
Bootstrap support for G0P8S2 as seed ortholog is 100%.
Bootstrap support for L0PD11 as seed ortholog is 100%.

Group of orthologs #809. Best score 141 bits
Score difference with first non-orthologous sequence - C.brenneri:141 P.jiroveci:141

G0PCJ7              	100.00%		L0PCG3              	100.00%
Bootstrap support for G0PCJ7 as seed ortholog is 100%.
Bootstrap support for L0PCG3 as seed ortholog is 100%.

Group of orthologs #810. Best score 140 bits
Score difference with first non-orthologous sequence - C.brenneri:41 P.jiroveci:140

G0N2V9              	100.00%		L0PD97              	100.00%
G0MRK0              	55.37%		
G0PED0              	53.26%		
G0MRJ9              	39.79%		
G0PED1              	17.05%		
Bootstrap support for G0N2V9 as seed ortholog is 92%.
Bootstrap support for L0PD97 as seed ortholog is 100%.

Group of orthologs #811. Best score 140 bits
Score difference with first non-orthologous sequence - C.brenneri:140 P.jiroveci:140

G0P8E7              	100.00%		L0PGP1              	100.00%
G0PC02              	14.36%		
G0NUJ9              	13.81%		
Bootstrap support for G0P8E7 as seed ortholog is 100%.
Bootstrap support for L0PGP1 as seed ortholog is 100%.

Group of orthologs #812. Best score 139 bits
Score difference with first non-orthologous sequence - C.brenneri:76 P.jiroveci:139

G0MPW3              	100.00%		L0PDN5              	100.00%
G0PGA9              	85.66%		
Bootstrap support for G0MPW3 as seed ortholog is 99%.
Bootstrap support for L0PDN5 as seed ortholog is 100%.

Group of orthologs #813. Best score 139 bits
Score difference with first non-orthologous sequence - C.brenneri:139 P.jiroveci:60

G0PIN8              	100.00%		L0P7C8              	100.00%
G0NAR7              	92.96%		
Bootstrap support for G0PIN8 as seed ortholog is 100%.
Bootstrap support for L0P7C8 as seed ortholog is 77%.

Group of orthologs #814. Best score 139 bits
Score difference with first non-orthologous sequence - C.brenneri:139 P.jiroveci:139

G0MNI0              	100.00%		L0PFY6              	100.00%
Bootstrap support for G0MNI0 as seed ortholog is 100%.
Bootstrap support for L0PFY6 as seed ortholog is 100%.

Group of orthologs #815. Best score 139 bits
Score difference with first non-orthologous sequence - C.brenneri:139 P.jiroveci:97

G0N7P2              	100.00%		L0PAG4              	100.00%
Bootstrap support for G0N7P2 as seed ortholog is 100%.
Bootstrap support for L0PAG4 as seed ortholog is 99%.

Group of orthologs #816. Best score 139 bits
Score difference with first non-orthologous sequence - C.brenneri:139 P.jiroveci:139

G0P9M7              	100.00%		L0PCA3              	100.00%
Bootstrap support for G0P9M7 as seed ortholog is 100%.
Bootstrap support for L0PCA3 as seed ortholog is 100%.

Group of orthologs #817. Best score 139 bits
Score difference with first non-orthologous sequence - C.brenneri:139 P.jiroveci:139

G0PIL9              	100.00%		L0PB34              	100.00%
Bootstrap support for G0PIL9 as seed ortholog is 100%.
Bootstrap support for L0PB34 as seed ortholog is 100%.

Group of orthologs #818. Best score 138 bits
Score difference with first non-orthologous sequence - C.brenneri:20 P.jiroveci:138

G0MXZ2              	100.00%		L0PE18              	100.00%
G0PLD2              	93.74%		
G0MU02              	51.30%		
G0MXZ0              	47.64%		
G0MXS9              	42.73%		
G0MS75              	40.33%		
G0MXZ1              	38.59%		
G0MS95              	37.63%		
G0PN73              	37.44%		
G0MM92              	31.28%		
G0NEM9              	30.90%		
G0PCN0              	30.03%		
G0NEN0              	29.36%		
G0MSA0              	26.47%		
G0P9A7              	25.60%		
G0MQ78              	18.86%		
G0M838              	17.23%		
G0MSA1              	15.30%		
G0MKP0              	14.05%		
G0M9A6              	5.97%		
G0MSU2              	5.39%		
Bootstrap support for G0MXZ2 as seed ortholog is 67%.
Alternative seed ortholog is G0NVV5 (20 bits away from this cluster)
Bootstrap support for L0PE18 as seed ortholog is 100%.

Group of orthologs #819. Best score 138 bits
Score difference with first non-orthologous sequence - C.brenneri:138 P.jiroveci:138

G0MZL8              	100.00%		L0PFH2              	100.00%
G0PE51              	47.21%		
G0P842              	21.39%		
G0NT71              	19.23%		
G0N9V1              	12.86%		
G0NAL3              	9.90%		
Bootstrap support for G0MZL8 as seed ortholog is 100%.
Bootstrap support for L0PFH2 as seed ortholog is 100%.

Group of orthologs #820. Best score 138 bits
Score difference with first non-orthologous sequence - C.brenneri:138 P.jiroveci:62

G0PCU7              	100.00%		L0PFD8              	100.00%
G0MFT2              	99.25%		
Bootstrap support for G0PCU7 as seed ortholog is 100%.
Bootstrap support for L0PFD8 as seed ortholog is 95%.

Group of orthologs #821. Best score 138 bits
Score difference with first non-orthologous sequence - C.brenneri:138 P.jiroveci:138

G0PNY2              	100.00%		L0PEZ2              	100.00%
                    	       		L0PH30              	100.00%
Bootstrap support for G0PNY2 as seed ortholog is 100%.
Bootstrap support for L0PEZ2 as seed ortholog is 100%.
Bootstrap support for L0PH30 as seed ortholog is 100%.

Group of orthologs #822. Best score 138 bits
Score difference with first non-orthologous sequence - C.brenneri:138 P.jiroveci:138

G0N242              	100.00%		L0PHN6              	100.00%
Bootstrap support for G0N242 as seed ortholog is 100%.
Bootstrap support for L0PHN6 as seed ortholog is 100%.

Group of orthologs #823. Best score 138 bits
Score difference with first non-orthologous sequence - C.brenneri:138 P.jiroveci:138

G0NZU3              	100.00%		L0PF05              	100.00%
Bootstrap support for G0NZU3 as seed ortholog is 100%.
Bootstrap support for L0PF05 as seed ortholog is 100%.

Group of orthologs #824. Best score 137 bits
Score difference with first non-orthologous sequence - C.brenneri:137 P.jiroveci:137

G0P8H7              	100.00%		L0PBH3              	100.00%
G0PHW7              	92.37%		
G0NWH7              	25.55%		
G0NH24              	23.81%		
G0P170              	14.15%		
G0MAE3              	13.05%		
Bootstrap support for G0P8H7 as seed ortholog is 100%.
Bootstrap support for L0PBH3 as seed ortholog is 100%.

Group of orthologs #825. Best score 137 bits
Score difference with first non-orthologous sequence - C.brenneri:137 P.jiroveci:137

G0NVZ1              	100.00%		L0PDN4              	100.00%
G0NA46              	89.99%		
Bootstrap support for G0NVZ1 as seed ortholog is 100%.
Bootstrap support for L0PDN4 as seed ortholog is 100%.

Group of orthologs #826. Best score 137 bits
Score difference with first non-orthologous sequence - C.brenneri:137 P.jiroveci:137

G0PNS6              	100.00%		L0PET7              	100.00%
G0N6Z5              	53.12%		
Bootstrap support for G0PNS6 as seed ortholog is 100%.
Bootstrap support for L0PET7 as seed ortholog is 100%.

Group of orthologs #827. Best score 136 bits
Score difference with first non-orthologous sequence - C.brenneri:136 P.jiroveci:136

G0NL04              	100.00%		L0P7D0              	100.00%
G0N748              	10.28%		
G0P855              	9.75%		
Bootstrap support for G0NL04 as seed ortholog is 100%.
Bootstrap support for L0P7D0 as seed ortholog is 100%.

Group of orthologs #828. Best score 136 bits
Score difference with first non-orthologous sequence - C.brenneri:136 P.jiroveci:136

G0N1R2              	100.00%		L0P6Q5              	100.00%
G0MLD2              	40.00%		
Bootstrap support for G0N1R2 as seed ortholog is 100%.
Bootstrap support for L0P6Q5 as seed ortholog is 100%.

Group of orthologs #829. Best score 136 bits
Score difference with first non-orthologous sequence - C.brenneri:136 P.jiroveci:136

G0MJ90              	100.00%		L0P7W4              	100.00%
Bootstrap support for G0MJ90 as seed ortholog is 100%.
Bootstrap support for L0P7W4 as seed ortholog is 100%.

Group of orthologs #830. Best score 136 bits
Score difference with first non-orthologous sequence - C.brenneri:136 P.jiroveci:136

G0MWR9              	100.00%		L0P7Y4              	100.00%
Bootstrap support for G0MWR9 as seed ortholog is 100%.
Bootstrap support for L0P7Y4 as seed ortholog is 100%.

Group of orthologs #831. Best score 136 bits
Score difference with first non-orthologous sequence - C.brenneri:136 P.jiroveci:136

G0N9Q9              	100.00%		L0PFX0              	100.00%
Bootstrap support for G0N9Q9 as seed ortholog is 100%.
Bootstrap support for L0PFX0 as seed ortholog is 100%.

Group of orthologs #832. Best score 136 bits
Score difference with first non-orthologous sequence - C.brenneri:136 P.jiroveci:136

G0PH25              	100.00%		L0PCU6              	100.00%
Bootstrap support for G0PH25 as seed ortholog is 100%.
Bootstrap support for L0PCU6 as seed ortholog is 100%.

Group of orthologs #833. Best score 135 bits
Score difference with first non-orthologous sequence - C.brenneri:135 P.jiroveci:135

G0N8J5              	100.00%		L0P858              	100.00%
                    	       		L0PDX5              	71.66%
Bootstrap support for G0N8J5 as seed ortholog is 100%.
Bootstrap support for L0P858 as seed ortholog is 100%.

Group of orthologs #834. Best score 135 bits
Score difference with first non-orthologous sequence - C.brenneri:135 P.jiroveci:135

G0NLL6              	100.00%		L0PE13              	100.00%
G0M893              	37.50%		
Bootstrap support for G0NLL6 as seed ortholog is 100%.
Bootstrap support for L0PE13 as seed ortholog is 100%.

Group of orthologs #835. Best score 135 bits
Score difference with first non-orthologous sequence - C.brenneri:135 P.jiroveci:135

G0P1Z2              	100.00%		L0PFW4              	100.00%
G0MJ04              	56.77%		
Bootstrap support for G0P1Z2 as seed ortholog is 100%.
Bootstrap support for L0PFW4 as seed ortholog is 100%.

Group of orthologs #836. Best score 135 bits
Score difference with first non-orthologous sequence - C.brenneri:135 P.jiroveci:135

G0ME32              	100.00%		L0PD37              	100.00%
Bootstrap support for G0ME32 as seed ortholog is 100%.
Bootstrap support for L0PD37 as seed ortholog is 100%.

Group of orthologs #837. Best score 134 bits
Score difference with first non-orthologous sequence - C.brenneri:134 P.jiroveci:134

G0NZZ5              	100.00%		L0PH83              	100.00%
G0PHJ8              	93.37%		
Bootstrap support for G0NZZ5 as seed ortholog is 100%.
Bootstrap support for L0PH83 as seed ortholog is 100%.

Group of orthologs #838. Best score 134 bits
Score difference with first non-orthologous sequence - C.brenneri:1 P.jiroveci:15

G0NKP8              	100.00%		L0PFJ7              	100.00%
Bootstrap support for G0NKP8 as seed ortholog is 51%.
Alternative seed ortholog is G0MJV3 (1 bits away from this cluster)
Bootstrap support for L0PFJ7 as seed ortholog is 64%.
Alternative seed ortholog is L0PBC8 (15 bits away from this cluster)

Group of orthologs #839. Best score 134 bits
Score difference with first non-orthologous sequence - C.brenneri:134 P.jiroveci:134

G0PCP8              	100.00%		L0P8D7              	100.00%
Bootstrap support for G0PCP8 as seed ortholog is 100%.
Bootstrap support for L0P8D7 as seed ortholog is 100%.

Group of orthologs #840. Best score 132 bits
Score difference with first non-orthologous sequence - C.brenneri:132 P.jiroveci:132

G0MLZ9              	100.00%		L0PEG7              	100.00%
G0PB98              	98.47%		
Bootstrap support for G0MLZ9 as seed ortholog is 100%.
Bootstrap support for L0PEG7 as seed ortholog is 100%.

Group of orthologs #841. Best score 132 bits
Score difference with first non-orthologous sequence - C.brenneri:70 P.jiroveci:132

G0MC35              	100.00%		L0PDN9              	100.00%
Bootstrap support for G0MC35 as seed ortholog is 99%.
Bootstrap support for L0PDN9 as seed ortholog is 100%.

Group of orthologs #842. Best score 132 bits
Score difference with first non-orthologous sequence - C.brenneri:132 P.jiroveci:132

G0MFX1              	100.00%		L0PAB2              	100.00%
Bootstrap support for G0MFX1 as seed ortholog is 100%.
Bootstrap support for L0PAB2 as seed ortholog is 100%.

Group of orthologs #843. Best score 131 bits
Score difference with first non-orthologous sequence - C.brenneri:59 P.jiroveci:57

G0NQ62              	100.00%		L0PD33              	100.00%
G0NQA1              	100.00%		
G0NQ64              	91.39%		
G0N7R5              	54.70%		
Bootstrap support for G0NQ62 as seed ortholog is 89%.
Bootstrap support for G0NQA1 as seed ortholog is 90%.
Bootstrap support for L0PD33 as seed ortholog is 97%.

Group of orthologs #844. Best score 131 bits
Score difference with first non-orthologous sequence - C.brenneri:131 P.jiroveci:131

G0N5N7              	100.00%		L0PCV5              	100.00%
Bootstrap support for G0N5N7 as seed ortholog is 100%.
Bootstrap support for L0PCV5 as seed ortholog is 100%.

Group of orthologs #845. Best score 131 bits
Score difference with first non-orthologous sequence - C.brenneri:131 P.jiroveci:131

G0NIN5              	100.00%		L0P962              	100.00%
Bootstrap support for G0NIN5 as seed ortholog is 100%.
Bootstrap support for L0P962 as seed ortholog is 100%.

Group of orthologs #846. Best score 131 bits
Score difference with first non-orthologous sequence - C.brenneri:131 P.jiroveci:131

G0NL32              	100.00%		L0PEV6              	100.00%
Bootstrap support for G0NL32 as seed ortholog is 100%.
Bootstrap support for L0PEV6 as seed ortholog is 100%.

Group of orthologs #847. Best score 131 bits
Score difference with first non-orthologous sequence - C.brenneri:131 P.jiroveci:131

G0P8N2              	100.00%		L0P8H6              	100.00%
Bootstrap support for G0P8N2 as seed ortholog is 100%.
Bootstrap support for L0P8H6 as seed ortholog is 100%.

Group of orthologs #848. Best score 130 bits
Score difference with first non-orthologous sequence - C.brenneri:24 P.jiroveci:130

G0PG91              	100.00%		L0PF58              	100.00%
G0MZC5              	99.03%		
G0P7Q2              	68.60%		
G0P5N2              	17.39%		
G0MWH2              	15.94%		
Bootstrap support for G0PG91 as seed ortholog is 78%.
Bootstrap support for L0PF58 as seed ortholog is 100%.

Group of orthologs #849. Best score 130 bits
Score difference with first non-orthologous sequence - C.brenneri:130 P.jiroveci:130

G0MVN5              	100.00%		L0PAZ1              	100.00%
Bootstrap support for G0MVN5 as seed ortholog is 100%.
Bootstrap support for L0PAZ1 as seed ortholog is 100%.

Group of orthologs #850. Best score 129 bits
Score difference with first non-orthologous sequence - C.brenneri:129 P.jiroveci:129

G0N2R1              	100.00%		L0PD09              	100.00%
G0MHF6              	62.61%		
G0M8D4              	16.82%		
G0N1S3              	11.96%		
G0PHZ3              	8.71%		
G0MUH0              	8.61%		
Bootstrap support for G0N2R1 as seed ortholog is 100%.
Bootstrap support for L0PD09 as seed ortholog is 100%.

Group of orthologs #851. Best score 129 bits
Score difference with first non-orthologous sequence - C.brenneri:72 P.jiroveci:129

G0N9M9              	100.00%		L0PBD5              	100.00%
G0N9N2              	98.80%		
Bootstrap support for G0N9M9 as seed ortholog is 95%.
Bootstrap support for L0PBD5 as seed ortholog is 100%.

Group of orthologs #852. Best score 129 bits
Score difference with first non-orthologous sequence - C.brenneri:129 P.jiroveci:129

G0N8T1              	100.00%		L0PF42              	100.00%
                    	       		L0PD01              	98.55%
Bootstrap support for G0N8T1 as seed ortholog is 100%.
Bootstrap support for L0PF42 as seed ortholog is 100%.

Group of orthologs #853. Best score 129 bits
Score difference with first non-orthologous sequence - C.brenneri:129 P.jiroveci:129

G0MWS0              	100.00%		L0PF62              	100.00%
Bootstrap support for G0MWS0 as seed ortholog is 100%.
Bootstrap support for L0PF62 as seed ortholog is 100%.

Group of orthologs #854. Best score 129 bits
Score difference with first non-orthologous sequence - C.brenneri:129 P.jiroveci:129

G0NIN6              	100.00%		L0PCP9              	100.00%
Bootstrap support for G0NIN6 as seed ortholog is 100%.
Bootstrap support for L0PCP9 as seed ortholog is 100%.

Group of orthologs #855. Best score 129 bits
Score difference with first non-orthologous sequence - C.brenneri:129 P.jiroveci:129

G0NQY5              	100.00%		L0P778              	100.00%
Bootstrap support for G0NQY5 as seed ortholog is 100%.
Bootstrap support for L0P778 as seed ortholog is 100%.

Group of orthologs #856. Best score 128 bits
Score difference with first non-orthologous sequence - C.brenneri:128 P.jiroveci:128

G0NF80              	100.00%		L0PC89              	100.00%
G0MH33              	6.72%		
Bootstrap support for G0NF80 as seed ortholog is 100%.
Bootstrap support for L0PC89 as seed ortholog is 100%.

Group of orthologs #857. Best score 128 bits
Score difference with first non-orthologous sequence - C.brenneri:128 P.jiroveci:128

G0NU78              	100.00%		L0PH54              	100.00%
G0PIR5              	97.62%		
Bootstrap support for G0NU78 as seed ortholog is 100%.
Bootstrap support for L0PH54 as seed ortholog is 100%.

Group of orthologs #858. Best score 128 bits
Score difference with first non-orthologous sequence - C.brenneri:128 P.jiroveci:128

G0MCA1              	100.00%		L0PAM3              	100.00%
Bootstrap support for G0MCA1 as seed ortholog is 100%.
Bootstrap support for L0PAM3 as seed ortholog is 100%.

Group of orthologs #859. Best score 128 bits
Score difference with first non-orthologous sequence - C.brenneri:128 P.jiroveci:65

G0N3Q4              	100.00%		L0P6T2              	100.00%
Bootstrap support for G0N3Q4 as seed ortholog is 100%.
Bootstrap support for L0P6T2 as seed ortholog is 96%.

Group of orthologs #860. Best score 128 bits
Score difference with first non-orthologous sequence - C.brenneri:52 P.jiroveci:128

G0MXF6              	100.00%		L0PFQ3              	100.00%
Bootstrap support for G0MXF6 as seed ortholog is 91%.
Bootstrap support for L0PFQ3 as seed ortholog is 100%.

Group of orthologs #861. Best score 128 bits
Score difference with first non-orthologous sequence - C.brenneri:128 P.jiroveci:128

G0NU65              	100.00%		L0P9S7              	100.00%
Bootstrap support for G0NU65 as seed ortholog is 100%.
Bootstrap support for L0P9S7 as seed ortholog is 100%.

Group of orthologs #862. Best score 128 bits
Score difference with first non-orthologous sequence - C.brenneri:128 P.jiroveci:128

G0PL05              	100.00%		L0PG38              	100.00%
Bootstrap support for G0PL05 as seed ortholog is 100%.
Bootstrap support for L0PG38 as seed ortholog is 100%.

Group of orthologs #863. Best score 127 bits
Score difference with first non-orthologous sequence - C.brenneri:127 P.jiroveci:127

G0N653              	100.00%		L0P7C4              	100.00%
G0NSB4              	91.48%		
G0ME60              	19.22%		
G0N876              	15.45%		
G0N655              	12.04%		
G0MAI2              	9.73%		
G0N654              	9.49%		
G0MHV1              	5.23%		
Bootstrap support for G0N653 as seed ortholog is 100%.
Bootstrap support for L0P7C4 as seed ortholog is 100%.

Group of orthologs #864. Best score 127 bits
Score difference with first non-orthologous sequence - C.brenneri:127 P.jiroveci:127

G0P6D3              	100.00%		L0PB62              	100.00%
G0MNH9              	41.82%		
Bootstrap support for G0P6D3 as seed ortholog is 100%.
Bootstrap support for L0PB62 as seed ortholog is 100%.

Group of orthologs #865. Best score 127 bits
Score difference with first non-orthologous sequence - C.brenneri:127 P.jiroveci:127

G0PE20              	100.00%		L0PAN5              	100.00%
G0PHP8              	100.00%		
Bootstrap support for G0PE20 as seed ortholog is 100%.
Bootstrap support for G0PHP8 as seed ortholog is 100%.
Bootstrap support for L0PAN5 as seed ortholog is 100%.

Group of orthologs #866. Best score 127 bits
Score difference with first non-orthologous sequence - C.brenneri:127 P.jiroveci:127

G0MLR3              	100.00%		L0P6S2              	100.00%
Bootstrap support for G0MLR3 as seed ortholog is 100%.
Bootstrap support for L0P6S2 as seed ortholog is 100%.

Group of orthologs #867. Best score 127 bits
Score difference with first non-orthologous sequence - C.brenneri:127 P.jiroveci:127

G0P2Y3              	100.00%		L0PGL6              	100.00%
Bootstrap support for G0P2Y3 as seed ortholog is 100%.
Bootstrap support for L0PGL6 as seed ortholog is 100%.

Group of orthologs #868. Best score 126 bits
Score difference with first non-orthologous sequence - C.brenneri:126 P.jiroveci:74

G0NZF8              	100.00%		L0PD77              	100.00%
G0P080              	100.00%		
G0M9U3              	76.51%		
Bootstrap support for G0NZF8 as seed ortholog is 100%.
Bootstrap support for G0P080 as seed ortholog is 100%.
Bootstrap support for L0PD77 as seed ortholog is 99%.

Group of orthologs #869. Best score 126 bits
Score difference with first non-orthologous sequence - C.brenneri:126 P.jiroveci:126

G0PK95              	100.00%		L0P800              	100.00%
Bootstrap support for G0PK95 as seed ortholog is 100%.
Bootstrap support for L0P800 as seed ortholog is 100%.

Group of orthologs #870. Best score 126 bits
Score difference with first non-orthologous sequence - C.brenneri:126 P.jiroveci:126

G0PK64              	100.00%		L0PF38              	100.00%
Bootstrap support for G0PK64 as seed ortholog is 100%.
Bootstrap support for L0PF38 as seed ortholog is 100%.

Group of orthologs #871. Best score 125 bits
Score difference with first non-orthologous sequence - C.brenneri:56 P.jiroveci:125

G0N4T0              	100.00%		L0PCT4              	100.00%
G0MCC5              	52.63%		
G0PLH2              	9.24%		
G0P5Y8              	9.11%		
G0PG08              	7.70%		
G0PCB1              	6.80%		
G0NB40              	5.52%		
Bootstrap support for G0N4T0 as seed ortholog is 92%.
Bootstrap support for L0PCT4 as seed ortholog is 100%.

Group of orthologs #872. Best score 125 bits
Score difference with first non-orthologous sequence - C.brenneri:125 P.jiroveci:125

G0NMH1              	100.00%		L0PFM1              	100.00%
G0P822              	78.67%		
Bootstrap support for G0NMH1 as seed ortholog is 100%.
Bootstrap support for L0PFM1 as seed ortholog is 100%.

Group of orthologs #873. Best score 125 bits
Score difference with first non-orthologous sequence - C.brenneri:125 P.jiroveci:125

G0MLR1              	100.00%		L0PEV4              	100.00%
Bootstrap support for G0MLR1 as seed ortholog is 100%.
Bootstrap support for L0PEV4 as seed ortholog is 100%.

Group of orthologs #874. Best score 124 bits
Score difference with first non-orthologous sequence - C.brenneri:67 P.jiroveci:124

G0NNZ4              	100.00%		L0PEV3              	100.00%
G0NNZ7              	98.35%		
Bootstrap support for G0NNZ4 as seed ortholog is 98%.
Bootstrap support for L0PEV3 as seed ortholog is 100%.

Group of orthologs #875. Best score 124 bits
Score difference with first non-orthologous sequence - C.brenneri:124 P.jiroveci:124

G0MCH4              	100.00%		L0PFZ8              	100.00%
Bootstrap support for G0MCH4 as seed ortholog is 100%.
Bootstrap support for L0PFZ8 as seed ortholog is 100%.

Group of orthologs #876. Best score 124 bits
Score difference with first non-orthologous sequence - C.brenneri:124 P.jiroveci:124

G0MN80              	100.00%		L0PI09              	100.00%
Bootstrap support for G0MN80 as seed ortholog is 100%.
Bootstrap support for L0PI09 as seed ortholog is 100%.

Group of orthologs #877. Best score 124 bits
Score difference with first non-orthologous sequence - C.brenneri:124 P.jiroveci:124

G0MXN5              	100.00%		L0P8V3              	100.00%
Bootstrap support for G0MXN5 as seed ortholog is 100%.
Bootstrap support for L0P8V3 as seed ortholog is 100%.

Group of orthologs #878. Best score 124 bits
Score difference with first non-orthologous sequence - C.brenneri:124 P.jiroveci:124

G0NL63              	100.00%		L0P852              	100.00%
Bootstrap support for G0NL63 as seed ortholog is 100%.
Bootstrap support for L0P852 as seed ortholog is 100%.

Group of orthologs #879. Best score 124 bits
Score difference with first non-orthologous sequence - C.brenneri:124 P.jiroveci:124

G0NXP6              	100.00%		L0PBU1              	100.00%
Bootstrap support for G0NXP6 as seed ortholog is 100%.
Bootstrap support for L0PBU1 as seed ortholog is 100%.

Group of orthologs #880. Best score 123 bits
Score difference with first non-orthologous sequence - C.brenneri:123 P.jiroveci:57

G0N0L6              	100.00%		L0PAW2              	100.00%
                    	       		L0P9F3              	6.08%
Bootstrap support for G0N0L6 as seed ortholog is 100%.
Bootstrap support for L0PAW2 as seed ortholog is 92%.

Group of orthologs #881. Best score 123 bits
Score difference with first non-orthologous sequence - C.brenneri:123 P.jiroveci:123

G0N4E1              	100.00%		L0PA24              	100.00%
G0N4E2              	12.21%		
Bootstrap support for G0N4E1 as seed ortholog is 100%.
Bootstrap support for L0PA24 as seed ortholog is 100%.

Group of orthologs #882. Best score 123 bits
Score difference with first non-orthologous sequence - C.brenneri:123 P.jiroveci:123

G0MGA2              	100.00%		L0PCZ5              	100.00%
Bootstrap support for G0MGA2 as seed ortholog is 100%.
Bootstrap support for L0PCZ5 as seed ortholog is 100%.

Group of orthologs #883. Best score 123 bits
Score difference with first non-orthologous sequence - C.brenneri:66 P.jiroveci:123

G0N5G0              	100.00%		L0PG59              	100.00%
Bootstrap support for G0N5G0 as seed ortholog is 99%.
Bootstrap support for L0PG59 as seed ortholog is 100%.

Group of orthologs #884. Best score 123 bits
Score difference with first non-orthologous sequence - C.brenneri:123 P.jiroveci:123

G0NJT7              	100.00%		L0PBL9              	100.00%
Bootstrap support for G0NJT7 as seed ortholog is 100%.
Bootstrap support for L0PBL9 as seed ortholog is 100%.

Group of orthologs #885. Best score 122 bits
Score difference with first non-orthologous sequence - C.brenneri:28 P.jiroveci:73

G0N7T3              	100.00%		L0P903              	100.00%
G0N7T2              	87.85%		
G0MKX4              	45.48%		
Bootstrap support for G0N7T3 as seed ortholog is 67%.
Alternative seed ortholog is G0NRM5 (28 bits away from this cluster)
Bootstrap support for L0P903 as seed ortholog is 97%.

Group of orthologs #886. Best score 122 bits
Score difference with first non-orthologous sequence - C.brenneri:122 P.jiroveci:122

G0N004              	100.00%		L0PEI9              	100.00%
G0MKA8              	45.31%		
Bootstrap support for G0N004 as seed ortholog is 100%.
Bootstrap support for L0PEI9 as seed ortholog is 100%.

Group of orthologs #887. Best score 121 bits
Score difference with first non-orthologous sequence - C.brenneri:121 P.jiroveci:121

G0NCG4              	100.00%		L0PCX8              	100.00%
G0NFU1              	100.00%		
G0NZR5              	100.00%		
Bootstrap support for G0NCG4 as seed ortholog is 100%.
Bootstrap support for G0NFU1 as seed ortholog is 100%.
Bootstrap support for G0NZR5 as seed ortholog is 100%.
Bootstrap support for L0PCX8 as seed ortholog is 100%.

Group of orthologs #888. Best score 121 bits
Score difference with first non-orthologous sequence - C.brenneri:121 P.jiroveci:121

G0MP07              	100.00%		L0P8G7              	100.00%
G0PGH5              	61.86%		
Bootstrap support for G0MP07 as seed ortholog is 100%.
Bootstrap support for L0P8G7 as seed ortholog is 100%.

Group of orthologs #889. Best score 121 bits
Score difference with first non-orthologous sequence - C.brenneri:121 P.jiroveci:121

G0P1N7              	100.00%		L0P7E2              	100.00%
G0P490              	100.00%		
Bootstrap support for G0P1N7 as seed ortholog is 100%.
Bootstrap support for G0P490 as seed ortholog is 100%.
Bootstrap support for L0P7E2 as seed ortholog is 100%.

Group of orthologs #890. Best score 121 bits
Score difference with first non-orthologous sequence - C.brenneri:121 P.jiroveci:121

G0PAF2              	100.00%		L0P948              	100.00%
G0NYJ9              	96.94%		
Bootstrap support for G0PAF2 as seed ortholog is 100%.
Bootstrap support for L0P948 as seed ortholog is 100%.

Group of orthologs #891. Best score 121 bits
Score difference with first non-orthologous sequence - C.brenneri:121 P.jiroveci:121

G0MLH8              	100.00%		L0PCH6              	100.00%
Bootstrap support for G0MLH8 as seed ortholog is 100%.
Bootstrap support for L0PCH6 as seed ortholog is 100%.

Group of orthologs #892. Best score 121 bits
Score difference with first non-orthologous sequence - C.brenneri:121 P.jiroveci:121

G0NV81              	100.00%		L0PAA1              	100.00%
Bootstrap support for G0NV81 as seed ortholog is 100%.
Bootstrap support for L0PAA1 as seed ortholog is 100%.

Group of orthologs #893. Best score 121 bits
Score difference with first non-orthologous sequence - C.brenneri:121 P.jiroveci:121

G0PES5              	100.00%		L0PG87              	100.00%
Bootstrap support for G0PES5 as seed ortholog is 100%.
Bootstrap support for L0PG87 as seed ortholog is 100%.

Group of orthologs #894. Best score 120 bits
Score difference with first non-orthologous sequence - C.brenneri:120 P.jiroveci:120

G0NLH1              	100.00%		L0PE36              	100.00%
G0NPY1              	55.57%		
G0P5N8              	5.38%		
G0PBB1              	5.01%		
Bootstrap support for G0NLH1 as seed ortholog is 100%.
Bootstrap support for L0PE36 as seed ortholog is 100%.

Group of orthologs #895. Best score 120 bits
Score difference with first non-orthologous sequence - C.brenneri:120 P.jiroveci:69

G0N412              	100.00%		L0PFH3              	100.00%
G0PH28              	92.11%		
Bootstrap support for G0N412 as seed ortholog is 100%.
Bootstrap support for L0PFH3 as seed ortholog is 97%.

Group of orthologs #896. Best score 120 bits
Score difference with first non-orthologous sequence - C.brenneri:120 P.jiroveci:120

G0NWH6              	100.00%		L0PHM1              	100.00%
Bootstrap support for G0NWH6 as seed ortholog is 100%.
Bootstrap support for L0PHM1 as seed ortholog is 100%.

Group of orthologs #897. Best score 119 bits
Score difference with first non-orthologous sequence - C.brenneri:42 P.jiroveci:119

G0NH09              	100.00%		L0P984              	100.00%
G0MXU7              	25.50%		
G0MXU6              	22.49%		
Bootstrap support for G0NH09 as seed ortholog is 86%.
Bootstrap support for L0P984 as seed ortholog is 100%.

Group of orthologs #898. Best score 119 bits
Score difference with first non-orthologous sequence - C.brenneri:119 P.jiroveci:119

G0NNV6              	100.00%		L0P7T6              	100.00%
G0PKT3              	99.38%		L0PF25              	100.00%
Bootstrap support for G0NNV6 as seed ortholog is 100%.
Bootstrap support for L0P7T6 as seed ortholog is 100%.
Bootstrap support for L0PF25 as seed ortholog is 100%.

Group of orthologs #899. Best score 119 bits
Score difference with first non-orthologous sequence - C.brenneri:119 P.jiroveci:119

G0MLW7              	100.00%		L0PH23              	100.00%
G0MGS2              	20.06%		
Bootstrap support for G0MLW7 as seed ortholog is 100%.
Bootstrap support for L0PH23 as seed ortholog is 100%.

Group of orthologs #900. Best score 119 bits
Score difference with first non-orthologous sequence - C.brenneri:13 P.jiroveci:119

G0NBD8              	100.00%		L0PG24              	100.00%
G0PEE6              	100.00%		
Bootstrap support for G0NBD8 as seed ortholog is 57%.
Alternative seed ortholog is G0NJR8 (13 bits away from this cluster)
Bootstrap support for G0PEE6 as seed ortholog is 57%.
Alternative seed ortholog is G0NJR8 (13 bits away from this cluster)
Bootstrap support for L0PG24 as seed ortholog is 100%.

Group of orthologs #901. Best score 119 bits
Score difference with first non-orthologous sequence - C.brenneri:119 P.jiroveci:119

G0NRM7              	100.00%		L0P7V4              	100.00%
G0NRM3              	97.69%		
Bootstrap support for G0NRM7 as seed ortholog is 100%.
Bootstrap support for L0P7V4 as seed ortholog is 100%.

Group of orthologs #902. Best score 119 bits
Score difference with first non-orthologous sequence - C.brenneri:119 P.jiroveci:119

G0P6R6              	100.00%		L0PI55              	100.00%
                    	       		L0P840              	84.30%
Bootstrap support for G0P6R6 as seed ortholog is 100%.
Bootstrap support for L0PI55 as seed ortholog is 100%.

Group of orthologs #903. Best score 119 bits
Score difference with first non-orthologous sequence - C.brenneri:119 P.jiroveci:119

G0MCJ0              	100.00%		L0PBG3              	100.00%
Bootstrap support for G0MCJ0 as seed ortholog is 100%.
Bootstrap support for L0PBG3 as seed ortholog is 100%.

Group of orthologs #904. Best score 119 bits
Score difference with first non-orthologous sequence - C.brenneri:119 P.jiroveci:119

G0MKR8              	100.00%		L0P8K4              	100.00%
Bootstrap support for G0MKR8 as seed ortholog is 100%.
Bootstrap support for L0P8K4 as seed ortholog is 100%.

Group of orthologs #905. Best score 119 bits
Score difference with first non-orthologous sequence - C.brenneri:119 P.jiroveci:119

G0N0E9              	100.00%		L0PB31              	100.00%
Bootstrap support for G0N0E9 as seed ortholog is 100%.
Bootstrap support for L0PB31 as seed ortholog is 100%.

Group of orthologs #906. Best score 119 bits
Score difference with first non-orthologous sequence - C.brenneri:119 P.jiroveci:119

G0N5M8              	100.00%		L0PEK8              	100.00%
Bootstrap support for G0N5M8 as seed ortholog is 100%.
Bootstrap support for L0PEK8 as seed ortholog is 100%.

Group of orthologs #907. Best score 119 bits
Score difference with first non-orthologous sequence - C.brenneri:119 P.jiroveci:119

G0NKA9              	100.00%		L0PCI9              	100.00%
Bootstrap support for G0NKA9 as seed ortholog is 100%.
Bootstrap support for L0PCI9 as seed ortholog is 100%.

Group of orthologs #908. Best score 118 bits
Score difference with first non-orthologous sequence - C.brenneri:118 P.jiroveci:118

G0NW69              	100.00%		L0PAF8              	100.00%
G0PMB6              	100.00%		L0PGI7              	61.06%
Bootstrap support for G0NW69 as seed ortholog is 100%.
Bootstrap support for G0PMB6 as seed ortholog is 100%.
Bootstrap support for L0PAF8 as seed ortholog is 100%.

Group of orthologs #909. Best score 118 bits
Score difference with first non-orthologous sequence - C.brenneri:118 P.jiroveci:17

G0MEM6              	100.00%		L0PCJ0              	100.00%
Bootstrap support for G0MEM6 as seed ortholog is 100%.
Bootstrap support for L0PCJ0 as seed ortholog is 56%.
Alternative seed ortholog is L0PGZ6 (17 bits away from this cluster)

Group of orthologs #910. Best score 118 bits
Score difference with first non-orthologous sequence - C.brenneri:118 P.jiroveci:118

G0N8F5              	100.00%		L0PEM2              	100.00%
Bootstrap support for G0N8F5 as seed ortholog is 100%.
Bootstrap support for L0PEM2 as seed ortholog is 100%.

Group of orthologs #911. Best score 118 bits
Score difference with first non-orthologous sequence - C.brenneri:118 P.jiroveci:118

G0NFQ2              	100.00%		L0P940              	100.00%
Bootstrap support for G0NFQ2 as seed ortholog is 100%.
Bootstrap support for L0P940 as seed ortholog is 100%.

Group of orthologs #912. Best score 118 bits
Score difference with first non-orthologous sequence - C.brenneri:118 P.jiroveci:118

G0NZ04              	100.00%		L0PFS7              	100.00%
Bootstrap support for G0NZ04 as seed ortholog is 100%.
Bootstrap support for L0PFS7 as seed ortholog is 100%.

Group of orthologs #913. Best score 117 bits
Score difference with first non-orthologous sequence - C.brenneri:117 P.jiroveci:117

G0NF83              	100.00%		L0PDZ3              	100.00%
G0PIE5              	80.65%		
Bootstrap support for G0NF83 as seed ortholog is 100%.
Bootstrap support for L0PDZ3 as seed ortholog is 100%.

Group of orthologs #914. Best score 117 bits
Score difference with first non-orthologous sequence - C.brenneri:117 P.jiroveci:117

G0NVT2              	100.00%		L0PAU0              	100.00%
Bootstrap support for G0NVT2 as seed ortholog is 100%.
Bootstrap support for L0PAU0 as seed ortholog is 100%.

Group of orthologs #915. Best score 117 bits
Score difference with first non-orthologous sequence - C.brenneri:117 P.jiroveci:117

G0PP08              	100.00%		L0PFZ3              	100.00%
Bootstrap support for G0PP08 as seed ortholog is 100%.
Bootstrap support for L0PFZ3 as seed ortholog is 100%.

Group of orthologs #916. Best score 116 bits
Score difference with first non-orthologous sequence - C.brenneri:48 P.jiroveci:116

G0PIL8              	100.00%		L0P990              	100.00%
G0P9Z4              	10.41%		
G0MZF2              	9.78%		
Bootstrap support for G0PIL8 as seed ortholog is 96%.
Bootstrap support for L0P990 as seed ortholog is 100%.

Group of orthologs #917. Best score 116 bits
Score difference with first non-orthologous sequence - C.brenneri:116 P.jiroveci:116

G0NTS6              	100.00%		L0PDY2              	100.00%
G0NIH9              	19.64%		
Bootstrap support for G0NTS6 as seed ortholog is 100%.
Bootstrap support for L0PDY2 as seed ortholog is 100%.

Group of orthologs #918. Best score 116 bits
Score difference with first non-orthologous sequence - C.brenneri:116 P.jiroveci:116

G0MQX6              	100.00%		L0PD86              	100.00%
Bootstrap support for G0MQX6 as seed ortholog is 100%.
Bootstrap support for L0PD86 as seed ortholog is 100%.

Group of orthologs #919. Best score 116 bits
Score difference with first non-orthologous sequence - C.brenneri:116 P.jiroveci:116

G0N4S2              	100.00%		L0P8Z4              	100.00%
Bootstrap support for G0N4S2 as seed ortholog is 100%.
Bootstrap support for L0P8Z4 as seed ortholog is 100%.

Group of orthologs #920. Best score 116 bits
Score difference with first non-orthologous sequence - C.brenneri:116 P.jiroveci:116

G0N5M7              	100.00%		L0PEC9              	100.00%
Bootstrap support for G0N5M7 as seed ortholog is 100%.
Bootstrap support for L0PEC9 as seed ortholog is 100%.

Group of orthologs #921. Best score 116 bits
Score difference with first non-orthologous sequence - C.brenneri:116 P.jiroveci:116

G0NMK4              	100.00%		L0PBK0              	100.00%
Bootstrap support for G0NMK4 as seed ortholog is 100%.
Bootstrap support for L0PBK0 as seed ortholog is 100%.

Group of orthologs #922. Best score 116 bits
Score difference with first non-orthologous sequence - C.brenneri:116 P.jiroveci:116

G0P754              	100.00%		L0P733              	100.00%
Bootstrap support for G0P754 as seed ortholog is 100%.
Bootstrap support for L0P733 as seed ortholog is 100%.

Group of orthologs #923. Best score 115 bits
Score difference with first non-orthologous sequence - C.brenneri:50 P.jiroveci:115

G0ML00              	100.00%		L0PG76              	100.00%
                    	       		L0PE70              	59.07%
Bootstrap support for G0ML00 as seed ortholog is 91%.
Bootstrap support for L0PG76 as seed ortholog is 100%.

Group of orthologs #924. Best score 115 bits
Score difference with first non-orthologous sequence - C.brenneri:115 P.jiroveci:115

G0NAE7              	100.00%		L0PHH2              	100.00%
Bootstrap support for G0NAE7 as seed ortholog is 100%.
Bootstrap support for L0PHH2 as seed ortholog is 100%.

Group of orthologs #925. Best score 114 bits
Score difference with first non-orthologous sequence - C.brenneri:10 P.jiroveci:114

G0NFH2              	100.00%		L0PE21              	100.00%
G0NFH1              	46.79%		
Bootstrap support for G0NFH2 as seed ortholog is 64%.
Alternative seed ortholog is G0M8N5 (10 bits away from this cluster)
Bootstrap support for L0PE21 as seed ortholog is 100%.

Group of orthologs #926. Best score 114 bits
Score difference with first non-orthologous sequence - C.brenneri:114 P.jiroveci:114

A9QVW4              	100.00%		L0P9L0              	100.00%
Bootstrap support for A9QVW4 as seed ortholog is 100%.
Bootstrap support for L0P9L0 as seed ortholog is 100%.

Group of orthologs #927. Best score 114 bits
Score difference with first non-orthologous sequence - C.brenneri:114 P.jiroveci:114

G0MYQ7              	100.00%		L0PF16              	100.00%
Bootstrap support for G0MYQ7 as seed ortholog is 100%.
Bootstrap support for L0PF16 as seed ortholog is 100%.

Group of orthologs #928. Best score 114 bits
Score difference with first non-orthologous sequence - C.brenneri:114 P.jiroveci:114

G0NEA4              	100.00%		L0PE97              	100.00%
Bootstrap support for G0NEA4 as seed ortholog is 100%.
Bootstrap support for L0PE97 as seed ortholog is 100%.

Group of orthologs #929. Best score 114 bits
Score difference with first non-orthologous sequence - C.brenneri:33 P.jiroveci:67

G0NQ28              	100.00%		L0PFE0              	100.00%
Bootstrap support for G0NQ28 as seed ortholog is 77%.
Bootstrap support for L0PFE0 as seed ortholog is 93%.

Group of orthologs #930. Best score 114 bits
Score difference with first non-orthologous sequence - C.brenneri:114 P.jiroveci:114

G0P989              	100.00%		L0PD00              	100.00%
Bootstrap support for G0P989 as seed ortholog is 100%.
Bootstrap support for L0PD00 as seed ortholog is 100%.

Group of orthologs #931. Best score 113 bits
Score difference with first non-orthologous sequence - C.brenneri:8 P.jiroveci:113

G0P187              	100.00%		L0PBR1              	100.00%
G0NH49              	98.00%		
G0NE76              	10.00%		
G0NTG4              	8.00%		
Bootstrap support for G0P187 as seed ortholog is 55%.
Alternative seed ortholog is G0PKT9 (8 bits away from this cluster)
Bootstrap support for L0PBR1 as seed ortholog is 100%.

Group of orthologs #932. Best score 113 bits
Score difference with first non-orthologous sequence - C.brenneri:113 P.jiroveci:113

G0NRJ8              	100.00%		L0PFA7              	100.00%
G0NZF5              	8.67%		
G0P082              	8.50%		
Bootstrap support for G0NRJ8 as seed ortholog is 100%.
Bootstrap support for L0PFA7 as seed ortholog is 100%.

Group of orthologs #933. Best score 113 bits
Score difference with first non-orthologous sequence - C.brenneri:113 P.jiroveci:113

G0MLM8              	100.00%		L0PE88              	100.00%
G0M6H1              	6.21%		
Bootstrap support for G0MLM8 as seed ortholog is 100%.
Bootstrap support for L0PE88 as seed ortholog is 100%.

Group of orthologs #934. Best score 113 bits
Score difference with first non-orthologous sequence - C.brenneri:63 P.jiroveci:57

G0MNJ9              	100.00%		L0PDB2              	100.00%
G0P6E6              	65.21%		
Bootstrap support for G0MNJ9 as seed ortholog is 89%.
Bootstrap support for L0PDB2 as seed ortholog is 90%.

Group of orthologs #935. Best score 112 bits
Score difference with first non-orthologous sequence - C.brenneri:112 P.jiroveci:112

G0N402              	100.00%		L0P9Z5              	100.00%
G0PKS9              	100.00%		
G0NHH7              	44.00%		
Bootstrap support for G0N402 as seed ortholog is 100%.
Bootstrap support for G0PKS9 as seed ortholog is 100%.
Bootstrap support for L0P9Z5 as seed ortholog is 100%.

Group of orthologs #936. Best score 112 bits
Score difference with first non-orthologous sequence - C.brenneri:112 P.jiroveci:112

G0NEW1              	100.00%		L0PC50              	100.00%
G0NEW3              	93.52%		
Bootstrap support for G0NEW1 as seed ortholog is 100%.
Bootstrap support for L0PC50 as seed ortholog is 100%.

Group of orthologs #937. Best score 112 bits
Score difference with first non-orthologous sequence - C.brenneri:112 P.jiroveci:112

G0P4V5              	100.00%		L0PAW7              	100.00%
Bootstrap support for G0P4V5 as seed ortholog is 100%.
Bootstrap support for L0PAW7 as seed ortholog is 100%.

Group of orthologs #938. Best score 111 bits
Score difference with first non-orthologous sequence - C.brenneri:42 P.jiroveci:42

G0MKR0              	100.00%		L0PBE1              	100.00%
G0MIE4              	15.55%		
G0MIE3              	15.55%		
Bootstrap support for G0MKR0 as seed ortholog is 97%.
Bootstrap support for L0PBE1 as seed ortholog is 97%.

Group of orthologs #939. Best score 111 bits
Score difference with first non-orthologous sequence - C.brenneri:111 P.jiroveci:111

G0MGJ0              	100.00%		L0PFP3              	100.00%
G0MGL0              	97.87%		
Bootstrap support for G0MGJ0 as seed ortholog is 100%.
Bootstrap support for L0PFP3 as seed ortholog is 100%.

Group of orthologs #940. Best score 111 bits
Score difference with first non-orthologous sequence - C.brenneri:111 P.jiroveci:111

G0N618              	100.00%		L0PFV4              	100.00%
G0P7N2              	100.00%		
Bootstrap support for G0N618 as seed ortholog is 100%.
Bootstrap support for G0P7N2 as seed ortholog is 100%.
Bootstrap support for L0PFV4 as seed ortholog is 100%.

Group of orthologs #941. Best score 111 bits
Score difference with first non-orthologous sequence - C.brenneri:111 P.jiroveci:111

G0P997              	100.00%		L0P9Q9              	100.00%
G0MQ90              	98.84%		
Bootstrap support for G0P997 as seed ortholog is 100%.
Bootstrap support for L0P9Q9 as seed ortholog is 100%.

Group of orthologs #942. Best score 111 bits
Score difference with first non-orthologous sequence - C.brenneri:111 P.jiroveci:111

G0P5Y0              	100.00%		L0PC08              	100.00%
Bootstrap support for G0P5Y0 as seed ortholog is 100%.
Bootstrap support for L0PC08 as seed ortholog is 100%.

Group of orthologs #943. Best score 110 bits
Score difference with first non-orthologous sequence - C.brenneri:110 P.jiroveci:110

G0MEL4              	100.00%		L0PEZ4              	100.00%
Bootstrap support for G0MEL4 as seed ortholog is 100%.
Bootstrap support for L0PEZ4 as seed ortholog is 100%.

Group of orthologs #944. Best score 110 bits
Score difference with first non-orthologous sequence - C.brenneri:110 P.jiroveci:110

G0MVH7              	100.00%		L0P938              	100.00%
Bootstrap support for G0MVH7 as seed ortholog is 100%.
Bootstrap support for L0P938 as seed ortholog is 100%.

Group of orthologs #945. Best score 110 bits
Score difference with first non-orthologous sequence - C.brenneri:110 P.jiroveci:110

G0NNK9              	100.00%		L0PFG9              	100.00%
Bootstrap support for G0NNK9 as seed ortholog is 100%.
Bootstrap support for L0PFG9 as seed ortholog is 100%.

Group of orthologs #946. Best score 110 bits
Score difference with first non-orthologous sequence - C.brenneri:110 P.jiroveci:110

G0PBI3              	100.00%		L0PAV4              	100.00%
Bootstrap support for G0PBI3 as seed ortholog is 100%.
Bootstrap support for L0PAV4 as seed ortholog is 100%.

Group of orthologs #947. Best score 109 bits
Score difference with first non-orthologous sequence - C.brenneri:109 P.jiroveci:109

G0M7F4              	100.00%		L0PBI8              	100.00%
G0ND68              	61.45%		
G0ND66              	36.42%		
Bootstrap support for G0M7F4 as seed ortholog is 100%.
Bootstrap support for L0PBI8 as seed ortholog is 100%.

Group of orthologs #948. Best score 109 bits
Score difference with first non-orthologous sequence - C.brenneri:109 P.jiroveci:109

G0NME8              	100.00%		L0P9S9              	100.00%
G0P5I2              	97.73%		L0PDT3              	45.09%
Bootstrap support for G0NME8 as seed ortholog is 100%.
Bootstrap support for L0P9S9 as seed ortholog is 100%.

Group of orthologs #949. Best score 109 bits
Score difference with first non-orthologous sequence - C.brenneri:109 P.jiroveci:109

G0MPZ0              	100.00%		L0PEB8              	100.00%
G0PE36              	100.00%		
Bootstrap support for G0MPZ0 as seed ortholog is 100%.
Bootstrap support for G0PE36 as seed ortholog is 100%.
Bootstrap support for L0PEB8 as seed ortholog is 100%.

Group of orthologs #950. Best score 109 bits
Score difference with first non-orthologous sequence - C.brenneri:109 P.jiroveci:109

G0N370              	100.00%		L0PG46              	100.00%
Bootstrap support for G0N370 as seed ortholog is 100%.
Bootstrap support for L0PG46 as seed ortholog is 100%.

Group of orthologs #951. Best score 109 bits
Score difference with first non-orthologous sequence - C.brenneri:109 P.jiroveci:66

G0PMC1              	100.00%		L0P9A7              	100.00%
Bootstrap support for G0PMC1 as seed ortholog is 100%.
Bootstrap support for L0P9A7 as seed ortholog is 99%.

Group of orthologs #952. Best score 108 bits
Score difference with first non-orthologous sequence - C.brenneri:108 P.jiroveci:108

G0NLF3              	100.00%		L0PAR2              	100.00%
G0NQ02              	100.00%		
Bootstrap support for G0NLF3 as seed ortholog is 100%.
Bootstrap support for G0NQ02 as seed ortholog is 100%.
Bootstrap support for L0PAR2 as seed ortholog is 100%.

Group of orthologs #953. Best score 108 bits
Score difference with first non-orthologous sequence - C.brenneri:108 P.jiroveci:108

G0P5P0              	100.00%		L0PCE0              	100.00%
G0PBB4              	68.63%		
Bootstrap support for G0P5P0 as seed ortholog is 100%.
Bootstrap support for L0PCE0 as seed ortholog is 100%.

Group of orthologs #954. Best score 108 bits
Score difference with first non-orthologous sequence - C.brenneri:108 P.jiroveci:108

G0PE95              	100.00%		L0P7U6              	100.00%
G0NWW7              	95.45%		
Bootstrap support for G0PE95 as seed ortholog is 100%.
Bootstrap support for L0P7U6 as seed ortholog is 100%.

Group of orthologs #955. Best score 108 bits
Score difference with first non-orthologous sequence - C.brenneri:29 P.jiroveci:108

G0M7I9              	100.00%		L0PA67              	100.00%
Bootstrap support for G0M7I9 as seed ortholog is 87%.
Bootstrap support for L0PA67 as seed ortholog is 100%.

Group of orthologs #956. Best score 108 bits
Score difference with first non-orthologous sequence - C.brenneri:108 P.jiroveci:108

G0MGG1              	100.00%		L0P9D1              	100.00%
Bootstrap support for G0MGG1 as seed ortholog is 100%.
Bootstrap support for L0P9D1 as seed ortholog is 100%.

Group of orthologs #957. Best score 108 bits
Score difference with first non-orthologous sequence - C.brenneri:108 P.jiroveci:108

G0N4M4              	100.00%		L0PD96              	100.00%
Bootstrap support for G0N4M4 as seed ortholog is 100%.
Bootstrap support for L0PD96 as seed ortholog is 100%.

Group of orthologs #958. Best score 107 bits
Score difference with first non-orthologous sequence - C.brenneri:107 P.jiroveci:107

G0NPM4              	100.00%		L0PF86              	100.00%
G0PME7              	53.20%		L0PC10              	85.47%
Bootstrap support for G0NPM4 as seed ortholog is 100%.
Bootstrap support for L0PF86 as seed ortholog is 100%.

Group of orthologs #959. Best score 107 bits
Score difference with first non-orthologous sequence - C.brenneri:107 P.jiroveci:107

G0MP78              	100.00%		L0PEL6              	100.00%
G0MP71              	98.70%		
Bootstrap support for G0MP78 as seed ortholog is 100%.
Bootstrap support for L0PEL6 as seed ortholog is 100%.

Group of orthologs #960. Best score 107 bits
Score difference with first non-orthologous sequence - C.brenneri:107 P.jiroveci:107

G0NYH1              	100.00%		L0PFE1              	100.00%
G0PHL4              	82.82%		
Bootstrap support for G0NYH1 as seed ortholog is 100%.
Bootstrap support for L0PFE1 as seed ortholog is 100%.

Group of orthologs #961. Best score 107 bits
Score difference with first non-orthologous sequence - C.brenneri:107 P.jiroveci:107

G0PD83              	100.00%		L0P7A4              	100.00%
G0PLQ6              	100.00%		
Bootstrap support for G0PD83 as seed ortholog is 100%.
Bootstrap support for G0PLQ6 as seed ortholog is 100%.
Bootstrap support for L0P7A4 as seed ortholog is 100%.

Group of orthologs #962. Best score 107 bits
Score difference with first non-orthologous sequence - C.brenneri:107 P.jiroveci:107

G0ME50              	100.00%		L0PAK0              	100.00%
Bootstrap support for G0ME50 as seed ortholog is 100%.
Bootstrap support for L0PAK0 as seed ortholog is 100%.

Group of orthologs #963. Best score 107 bits
Score difference with first non-orthologous sequence - C.brenneri:34 P.jiroveci:107

G0MLI7              	100.00%		L0PCQ6              	100.00%
Bootstrap support for G0MLI7 as seed ortholog is 83%.
Bootstrap support for L0PCQ6 as seed ortholog is 100%.

Group of orthologs #964. Best score 107 bits
Score difference with first non-orthologous sequence - C.brenneri:26 P.jiroveci:107

G0MKI7              	100.00%		L0PFU9              	100.00%
Bootstrap support for G0MKI7 as seed ortholog is 84%.
Bootstrap support for L0PFU9 as seed ortholog is 100%.

Group of orthologs #965. Best score 107 bits
Score difference with first non-orthologous sequence - C.brenneri:107 P.jiroveci:107

G0NAT2              	100.00%		L0P935              	100.00%
Bootstrap support for G0NAT2 as seed ortholog is 100%.
Bootstrap support for L0P935 as seed ortholog is 100%.

Group of orthologs #966. Best score 107 bits
Score difference with first non-orthologous sequence - C.brenneri:107 P.jiroveci:107

G0NBU4              	100.00%		L0PCN2              	100.00%
Bootstrap support for G0NBU4 as seed ortholog is 100%.
Bootstrap support for L0PCN2 as seed ortholog is 100%.

Group of orthologs #967. Best score 106 bits
Score difference with first non-orthologous sequence - C.brenneri:14 P.jiroveci:106

G0P740              	100.00%		L0P6Z0              	100.00%
G0MFE9              	97.70%		
Bootstrap support for G0P740 as seed ortholog is 94%.
Bootstrap support for L0P6Z0 as seed ortholog is 100%.

Group of orthologs #968. Best score 106 bits
Score difference with first non-orthologous sequence - C.brenneri:106 P.jiroveci:106

G0MEK9              	100.00%		L0P901              	100.00%
Bootstrap support for G0MEK9 as seed ortholog is 100%.
Bootstrap support for L0P901 as seed ortholog is 100%.

Group of orthologs #969. Best score 106 bits
Score difference with first non-orthologous sequence - C.brenneri:106 P.jiroveci:106

G0N6K9              	100.00%		L0PDI3              	100.00%
Bootstrap support for G0N6K9 as seed ortholog is 100%.
Bootstrap support for L0PDI3 as seed ortholog is 100%.

Group of orthologs #970. Best score 106 bits
Score difference with first non-orthologous sequence - C.brenneri:106 P.jiroveci:106

G0N5T9              	100.00%		L0PFP7              	100.00%
Bootstrap support for G0N5T9 as seed ortholog is 100%.
Bootstrap support for L0PFP7 as seed ortholog is 100%.

Group of orthologs #971. Best score 106 bits
Score difference with first non-orthologous sequence - C.brenneri:106 P.jiroveci:106

G0NUX7              	100.00%		L0P7T1              	100.00%
Bootstrap support for G0NUX7 as seed ortholog is 100%.
Bootstrap support for L0P7T1 as seed ortholog is 100%.

Group of orthologs #972. Best score 105 bits
Score difference with first non-orthologous sequence - C.brenneri:105 P.jiroveci:105

G0NND8              	100.00%		L0P997              	100.00%
G0PGJ0              	73.46%		
Bootstrap support for G0NND8 as seed ortholog is 100%.
Bootstrap support for L0P997 as seed ortholog is 100%.

Group of orthologs #973. Best score 105 bits
Score difference with first non-orthologous sequence - C.brenneri:105 P.jiroveci:105

G0NT60              	100.00%		L0PDV7              	100.00%
G0PD46              	100.00%		
Bootstrap support for G0NT60 as seed ortholog is 100%.
Bootstrap support for G0PD46 as seed ortholog is 100%.
Bootstrap support for L0PDV7 as seed ortholog is 100%.

Group of orthologs #974. Best score 105 bits
Score difference with first non-orthologous sequence - C.brenneri:105 P.jiroveci:105

G0MHJ1              	100.00%		L0PDZ4              	100.00%
Bootstrap support for G0MHJ1 as seed ortholog is 100%.
Bootstrap support for L0PDZ4 as seed ortholog is 100%.

Group of orthologs #975. Best score 105 bits
Score difference with first non-orthologous sequence - C.brenneri:38 P.jiroveci:105

G0MYP7              	100.00%		L0PBZ4              	100.00%
Bootstrap support for G0MYP7 as seed ortholog is 95%.
Bootstrap support for L0PBZ4 as seed ortholog is 100%.

Group of orthologs #976. Best score 105 bits
Score difference with first non-orthologous sequence - C.brenneri:105 P.jiroveci:105

G0NDL9              	100.00%		L0PA07              	100.00%
Bootstrap support for G0NDL9 as seed ortholog is 100%.
Bootstrap support for L0PA07 as seed ortholog is 100%.

Group of orthologs #977. Best score 105 bits
Score difference with first non-orthologous sequence - C.brenneri:105 P.jiroveci:105

G0NRU2              	100.00%		L0PDA4              	100.00%
Bootstrap support for G0NRU2 as seed ortholog is 100%.
Bootstrap support for L0PDA4 as seed ortholog is 100%.

Group of orthologs #978. Best score 105 bits
Score difference with first non-orthologous sequence - C.brenneri:105 P.jiroveci:105

G0P4B9              	100.00%		L0PG04              	100.00%
Bootstrap support for G0P4B9 as seed ortholog is 100%.
Bootstrap support for L0PG04 as seed ortholog is 100%.

Group of orthologs #979. Best score 104 bits
Score difference with first non-orthologous sequence - C.brenneri:104 P.jiroveci:104

G0MRB0              	100.00%		L0PFD0              	100.00%
G0PDP8              	100.00%		
Bootstrap support for G0MRB0 as seed ortholog is 100%.
Bootstrap support for G0PDP8 as seed ortholog is 100%.
Bootstrap support for L0PFD0 as seed ortholog is 100%.

Group of orthologs #980. Best score 104 bits
Score difference with first non-orthologous sequence - C.brenneri:104 P.jiroveci:104

G0NLP5              	100.00%		L0P939              	100.00%
                    	       		L0PFG4              	88.41%
Bootstrap support for G0NLP5 as seed ortholog is 100%.
Bootstrap support for L0P939 as seed ortholog is 100%.

Group of orthologs #981. Best score 104 bits
Score difference with first non-orthologous sequence - C.brenneri:104 P.jiroveci:104

G0MK48              	100.00%		L0PBN7              	100.00%
Bootstrap support for G0MK48 as seed ortholog is 100%.
Bootstrap support for L0PBN7 as seed ortholog is 100%.

Group of orthologs #982. Best score 104 bits
Score difference with first non-orthologous sequence - C.brenneri:104 P.jiroveci:104

G0N5L4              	100.00%		L0P9F1              	100.00%
Bootstrap support for G0N5L4 as seed ortholog is 100%.
Bootstrap support for L0P9F1 as seed ortholog is 100%.

Group of orthologs #983. Best score 104 bits
Score difference with first non-orthologous sequence - C.brenneri:104 P.jiroveci:104

G0P7L8              	100.00%		L0P9Z6              	100.00%
Bootstrap support for G0P7L8 as seed ortholog is 100%.
Bootstrap support for L0P9Z6 as seed ortholog is 100%.

Group of orthologs #984. Best score 104 bits
Score difference with first non-orthologous sequence - C.brenneri:104 P.jiroveci:104

G0PLE4              	100.00%		L0PEW9              	100.00%
Bootstrap support for G0PLE4 as seed ortholog is 100%.
Bootstrap support for L0PEW9 as seed ortholog is 100%.

Group of orthologs #985. Best score 103 bits
Score difference with first non-orthologous sequence - C.brenneri:103 P.jiroveci:103

G0P832              	100.00%		L0PD60              	100.00%
G0PA73              	82.36%		
G0MJ58              	31.17%		
G0N4S4              	24.93%		
G0NFG8              	10.34%		
Bootstrap support for G0P832 as seed ortholog is 100%.
Bootstrap support for L0PD60 as seed ortholog is 100%.

Group of orthologs #986. Best score 102 bits
Score difference with first non-orthologous sequence - C.brenneri:102 P.jiroveci:102

G0PG09              	100.00%		L0P872              	100.00%
G0PCB0              	99.03%		
Bootstrap support for G0PG09 as seed ortholog is 100%.
Bootstrap support for L0P872 as seed ortholog is 100%.

Group of orthologs #987. Best score 102 bits
Score difference with first non-orthologous sequence - C.brenneri:102 P.jiroveci:102

G0MES3              	100.00%		L0PF65              	100.00%
Bootstrap support for G0MES3 as seed ortholog is 100%.
Bootstrap support for L0PF65 as seed ortholog is 100%.

Group of orthologs #988. Best score 102 bits
Score difference with first non-orthologous sequence - C.brenneri:102 P.jiroveci:102

G0MS93              	100.00%		L0PET6              	100.00%
Bootstrap support for G0MS93 as seed ortholog is 100%.
Bootstrap support for L0PET6 as seed ortholog is 100%.

Group of orthologs #989. Best score 102 bits
Score difference with first non-orthologous sequence - C.brenneri:57 P.jiroveci:102

G0NTE9              	100.00%		L0PDX2              	100.00%
Bootstrap support for G0NTE9 as seed ortholog is 99%.
Bootstrap support for L0PDX2 as seed ortholog is 100%.

Group of orthologs #990. Best score 101 bits
Score difference with first non-orthologous sequence - C.brenneri:101 P.jiroveci:101

G0N9R0              	100.00%		L0PG13              	100.00%
Bootstrap support for G0N9R0 as seed ortholog is 100%.
Bootstrap support for L0PG13 as seed ortholog is 100%.

Group of orthologs #991. Best score 100 bits
Score difference with first non-orthologous sequence - C.brenneri:100 P.jiroveci:100

G0MJI2              	100.00%		L0PBU9              	100.00%
Bootstrap support for G0MJI2 as seed ortholog is 100%.
Bootstrap support for L0PBU9 as seed ortholog is 100%.

Group of orthologs #992. Best score 100 bits
Score difference with first non-orthologous sequence - C.brenneri:100 P.jiroveci:100

G0NIZ1              	100.00%		L0P9R5              	100.00%
Bootstrap support for G0NIZ1 as seed ortholog is 100%.
Bootstrap support for L0P9R5 as seed ortholog is 100%.

Group of orthologs #993. Best score 100 bits
Score difference with first non-orthologous sequence - C.brenneri:16 P.jiroveci:100

G0NHK8              	100.00%		L0PDF0              	100.00%
Bootstrap support for G0NHK8 as seed ortholog is 67%.
Alternative seed ortholog is G0NWH9 (16 bits away from this cluster)
Bootstrap support for L0PDF0 as seed ortholog is 100%.

Group of orthologs #994. Best score 100 bits
Score difference with first non-orthologous sequence - C.brenneri:100 P.jiroveci:100

G0NRH1              	100.00%		L0PCM4              	100.00%
Bootstrap support for G0NRH1 as seed ortholog is 100%.
Bootstrap support for L0PCM4 as seed ortholog is 100%.

Group of orthologs #995. Best score 99 bits
Score difference with first non-orthologous sequence - C.brenneri:99 P.jiroveci:99

G0MNL9              	100.00%		L0PGB6              	100.00%
                    	       		L0PG66              	86.01%
Bootstrap support for G0MNL9 as seed ortholog is 100%.
Bootstrap support for L0PGB6 as seed ortholog is 100%.

Group of orthologs #996. Best score 99 bits
Score difference with first non-orthologous sequence - C.brenneri:23 P.jiroveci:99

G0N761              	100.00%		L0PD63              	100.00%
G0NVQ5              	63.27%		
Bootstrap support for G0N761 as seed ortholog is 85%.
Bootstrap support for L0PD63 as seed ortholog is 100%.

Group of orthologs #997. Best score 99 bits
Score difference with first non-orthologous sequence - C.brenneri:99 P.jiroveci:99

G0NLG4              	100.00%		L0PE05              	100.00%
G0NPY9              	71.26%		
Bootstrap support for G0NLG4 as seed ortholog is 100%.
Bootstrap support for L0PE05 as seed ortholog is 100%.

Group of orthologs #998. Best score 99 bits
Score difference with first non-orthologous sequence - C.brenneri:99 P.jiroveci:99

G0MBQ5              	100.00%		L0PCX0              	100.00%
Bootstrap support for G0MBQ5 as seed ortholog is 100%.
Bootstrap support for L0PCX0 as seed ortholog is 100%.

Group of orthologs #999. Best score 99 bits
Score difference with first non-orthologous sequence - C.brenneri:99 P.jiroveci:99

G0ME53              	100.00%		L0PFB0              	100.00%
Bootstrap support for G0ME53 as seed ortholog is 100%.
Bootstrap support for L0PFB0 as seed ortholog is 100%.

Group of orthologs #1000. Best score 99 bits
Score difference with first non-orthologous sequence - C.brenneri:99 P.jiroveci:99

G0MY22              	100.00%		L0PE76              	100.00%
Bootstrap support for G0MY22 as seed ortholog is 100%.
Bootstrap support for L0PE76 as seed ortholog is 100%.

Group of orthologs #1001. Best score 99 bits
Score difference with first non-orthologous sequence - C.brenneri:99 P.jiroveci:99

G0P0W9              	100.00%		L0PCK2              	100.00%
Bootstrap support for G0P0W9 as seed ortholog is 100%.
Bootstrap support for L0PCK2 as seed ortholog is 100%.

Group of orthologs #1002. Best score 99 bits
Score difference with first non-orthologous sequence - C.brenneri:99 P.jiroveci:99

G0P4U8              	100.00%		L0PA35              	100.00%
Bootstrap support for G0P4U8 as seed ortholog is 100%.
Bootstrap support for L0PA35 as seed ortholog is 100%.

Group of orthologs #1003. Best score 98 bits
Score difference with first non-orthologous sequence - C.brenneri:98 P.jiroveci:98

G0MC36              	100.00%		L0PBQ7              	100.00%
G0MAJ0              	6.98%		
Bootstrap support for G0MC36 as seed ortholog is 100%.
Bootstrap support for L0PBQ7 as seed ortholog is 100%.

Group of orthologs #1004. Best score 98 bits
Score difference with first non-orthologous sequence - C.brenneri:98 P.jiroveci:98

G0N5K5              	100.00%		L0P7G9              	100.00%
Bootstrap support for G0N5K5 as seed ortholog is 100%.
Bootstrap support for L0P7G9 as seed ortholog is 100%.

Group of orthologs #1005. Best score 97 bits
Score difference with first non-orthologous sequence - C.brenneri:97 P.jiroveci:97

G0NRK5              	100.00%		L0PET3              	100.00%
Bootstrap support for G0NRK5 as seed ortholog is 100%.
Bootstrap support for L0PET3 as seed ortholog is 100%.

Group of orthologs #1006. Best score 97 bits
Score difference with first non-orthologous sequence - C.brenneri:97 P.jiroveci:97

G0PFA6              	100.00%		L0P995              	100.00%
Bootstrap support for G0PFA6 as seed ortholog is 100%.
Bootstrap support for L0P995 as seed ortholog is 100%.

Group of orthologs #1007. Best score 96 bits
Score difference with first non-orthologous sequence - C.brenneri:96 P.jiroveci:96

G0MCJ3              	100.00%		L0PGM7              	100.00%
                    	       		L0PGY6              	94.95%
Bootstrap support for G0MCJ3 as seed ortholog is 100%.
Bootstrap support for L0PGM7 as seed ortholog is 100%.

Group of orthologs #1008. Best score 96 bits
Score difference with first non-orthologous sequence - C.brenneri:96 P.jiroveci:96

G0NZ35              	100.00%		L0PEH7              	100.00%
G0PFL1              	97.90%		
Bootstrap support for G0NZ35 as seed ortholog is 100%.
Bootstrap support for L0PEH7 as seed ortholog is 100%.

Group of orthologs #1009. Best score 96 bits
Score difference with first non-orthologous sequence - C.brenneri:96 P.jiroveci:96

G0MCJ9              	100.00%		L0PD90              	100.00%
Bootstrap support for G0MCJ9 as seed ortholog is 100%.
Bootstrap support for L0PD90 as seed ortholog is 100%.

Group of orthologs #1010. Best score 96 bits
Score difference with first non-orthologous sequence - C.brenneri:96 P.jiroveci:96

G0MCR6              	100.00%		L0PFD1              	100.00%
Bootstrap support for G0MCR6 as seed ortholog is 100%.
Bootstrap support for L0PFD1 as seed ortholog is 100%.

Group of orthologs #1011. Best score 96 bits
Score difference with first non-orthologous sequence - C.brenneri:96 P.jiroveci:96

G0MLF8              	100.00%		L0P8B5              	100.00%
Bootstrap support for G0MLF8 as seed ortholog is 100%.
Bootstrap support for L0P8B5 as seed ortholog is 100%.

Group of orthologs #1012. Best score 96 bits
Score difference with first non-orthologous sequence - C.brenneri:96 P.jiroveci:96

G0NRF9              	100.00%		L0P7Y1              	100.00%
Bootstrap support for G0NRF9 as seed ortholog is 100%.
Bootstrap support for L0P7Y1 as seed ortholog is 100%.

Group of orthologs #1013. Best score 95 bits
Score difference with first non-orthologous sequence - C.brenneri:21 P.jiroveci:95

G0MGS1              	100.00%		L0PGP4              	100.00%
G0NQC1              	22.47%		
G0MYT3              	9.54%		
Bootstrap support for G0MGS1 as seed ortholog is 67%.
Alternative seed ortholog is G0MPI9 (21 bits away from this cluster)
Bootstrap support for L0PGP4 as seed ortholog is 100%.

Group of orthologs #1014. Best score 95 bits
Score difference with first non-orthologous sequence - C.brenneri:95 P.jiroveci:95

G0NYX4              	100.00%		L0PEZ7              	100.00%
G0PLF8              	100.00%		
Bootstrap support for G0NYX4 as seed ortholog is 100%.
Bootstrap support for G0PLF8 as seed ortholog is 100%.
Bootstrap support for L0PEZ7 as seed ortholog is 100%.

Group of orthologs #1015. Best score 95 bits
Score difference with first non-orthologous sequence - C.brenneri:95 P.jiroveci:95

G0MCK2              	100.00%		L0P8J7              	100.00%
Bootstrap support for G0MCK2 as seed ortholog is 100%.
Bootstrap support for L0P8J7 as seed ortholog is 100%.

Group of orthologs #1016. Best score 95 bits
Score difference with first non-orthologous sequence - C.brenneri:95 P.jiroveci:95

G0MEB3              	100.00%		L0PA97              	100.00%
Bootstrap support for G0MEB3 as seed ortholog is 100%.
Bootstrap support for L0PA97 as seed ortholog is 100%.

Group of orthologs #1017. Best score 95 bits
Score difference with first non-orthologous sequence - C.brenneri:95 P.jiroveci:95

G0MNN9              	100.00%		L0P9E5              	100.00%
Bootstrap support for G0MNN9 as seed ortholog is 100%.
Bootstrap support for L0P9E5 as seed ortholog is 100%.

Group of orthologs #1018. Best score 95 bits
Score difference with first non-orthologous sequence - C.brenneri:95 P.jiroveci:95

G0MKJ1              	100.00%		L0PFC3              	100.00%
Bootstrap support for G0MKJ1 as seed ortholog is 100%.
Bootstrap support for L0PFC3 as seed ortholog is 100%.

Group of orthologs #1019. Best score 95 bits
Score difference with first non-orthologous sequence - C.brenneri:95 P.jiroveci:95

G0MS22              	100.00%		L0PD56              	100.00%
Bootstrap support for G0MS22 as seed ortholog is 100%.
Bootstrap support for L0PD56 as seed ortholog is 100%.

Group of orthologs #1020. Best score 95 bits
Score difference with first non-orthologous sequence - C.brenneri:95 P.jiroveci:95

G0MYU1              	100.00%		L0PFH1              	100.00%
Bootstrap support for G0MYU1 as seed ortholog is 100%.
Bootstrap support for L0PFH1 as seed ortholog is 100%.

Group of orthologs #1021. Best score 94 bits
Score difference with first non-orthologous sequence - C.brenneri:20 P.jiroveci:94

G0NJQ4              	100.00%		L0PDD4              	100.00%
G0PDR6              	97.56%		
G0P6M4              	9.76%		
G0PC07              	8.94%		
Bootstrap support for G0NJQ4 as seed ortholog is 85%.
Bootstrap support for L0PDD4 as seed ortholog is 100%.

Group of orthologs #1022. Best score 94 bits
Score difference with first non-orthologous sequence - C.brenneri:94 P.jiroveci:94

G0MMX9              	100.00%		L0PDN8              	100.00%
G0PJ95              	100.00%		
Bootstrap support for G0MMX9 as seed ortholog is 100%.
Bootstrap support for G0PJ95 as seed ortholog is 100%.
Bootstrap support for L0PDN8 as seed ortholog is 100%.

Group of orthologs #1023. Best score 94 bits
Score difference with first non-orthologous sequence - C.brenneri:94 P.jiroveci:94

G0P0X3              	100.00%		L0PDV9              	100.00%
G0PJ27              	100.00%		
Bootstrap support for G0P0X3 as seed ortholog is 100%.
Bootstrap support for G0PJ27 as seed ortholog is 100%.
Bootstrap support for L0PDV9 as seed ortholog is 100%.

Group of orthologs #1024. Best score 94 bits
Score difference with first non-orthologous sequence - C.brenneri:40 P.jiroveci:94

G0MGK5              	100.00%		L0PFA1              	100.00%
Bootstrap support for G0MGK5 as seed ortholog is 99%.
Bootstrap support for L0PFA1 as seed ortholog is 100%.

Group of orthologs #1025. Best score 94 bits
Score difference with first non-orthologous sequence - C.brenneri:94 P.jiroveci:94

G0MPU7              	100.00%		L0PCZ2              	100.00%
Bootstrap support for G0MPU7 as seed ortholog is 100%.
Bootstrap support for L0PCZ2 as seed ortholog is 100%.

Group of orthologs #1026. Best score 94 bits
Score difference with first non-orthologous sequence - C.brenneri:94 P.jiroveci:94

G0MVB6              	100.00%		L0PG28              	100.00%
Bootstrap support for G0MVB6 as seed ortholog is 100%.
Bootstrap support for L0PG28 as seed ortholog is 100%.

Group of orthologs #1027. Best score 94 bits
Score difference with first non-orthologous sequence - C.brenneri:94 P.jiroveci:94

G0NKL6              	100.00%		L0PDG8              	100.00%
Bootstrap support for G0NKL6 as seed ortholog is 100%.
Bootstrap support for L0PDG8 as seed ortholog is 100%.

Group of orthologs #1028. Best score 94 bits
Score difference with first non-orthologous sequence - C.brenneri:37 P.jiroveci:94

G0NRD3              	100.00%		L0PF67              	100.00%
Bootstrap support for G0NRD3 as seed ortholog is 76%.
Bootstrap support for L0PF67 as seed ortholog is 100%.

Group of orthologs #1029. Best score 93 bits
Score difference with first non-orthologous sequence - C.brenneri:93 P.jiroveci:93

G0PHJ9              	100.00%		L0PCG6              	100.00%
G0NZZ6              	95.33%		
Bootstrap support for G0PHJ9 as seed ortholog is 100%.
Bootstrap support for L0PCG6 as seed ortholog is 100%.

Group of orthologs #1030. Best score 93 bits
Score difference with first non-orthologous sequence - C.brenneri:93 P.jiroveci:93

G0MZT0              	100.00%		L0PD30              	100.00%
Bootstrap support for G0MZT0 as seed ortholog is 100%.
Bootstrap support for L0PD30 as seed ortholog is 100%.

Group of orthologs #1031. Best score 93 bits
Score difference with first non-orthologous sequence - C.brenneri:93 P.jiroveci:93

G0NA81              	100.00%		L0PFE6              	100.00%
Bootstrap support for G0NA81 as seed ortholog is 100%.
Bootstrap support for L0PFE6 as seed ortholog is 100%.

Group of orthologs #1032. Best score 93 bits
Score difference with first non-orthologous sequence - C.brenneri:33 P.jiroveci:93

G0PC31              	100.00%		L0P9Y3              	100.00%
Bootstrap support for G0PC31 as seed ortholog is 53%.
Alternative seed ortholog is G0MCV1 (33 bits away from this cluster)
Bootstrap support for L0P9Y3 as seed ortholog is 100%.

Group of orthologs #1033. Best score 92 bits
Score difference with first non-orthologous sequence - C.brenneri:92 P.jiroveci:92

G0MC15              	100.00%		L0P816              	100.00%
G0MQH8              	20.24%		
Bootstrap support for G0MC15 as seed ortholog is 100%.
Bootstrap support for L0P816 as seed ortholog is 100%.

Group of orthologs #1034. Best score 92 bits
Score difference with first non-orthologous sequence - C.brenneri:92 P.jiroveci:92

G0NPR9              	100.00%		L0PAK9              	100.00%
G0PLT2              	100.00%		
Bootstrap support for G0NPR9 as seed ortholog is 100%.
Bootstrap support for G0PLT2 as seed ortholog is 100%.
Bootstrap support for L0PAK9 as seed ortholog is 100%.

Group of orthologs #1035. Best score 92 bits
Score difference with first non-orthologous sequence - C.brenneri:92 P.jiroveci:40

G0NU60              	100.00%		L0PD23              	100.00%
Bootstrap support for G0NU60 as seed ortholog is 100%.
Bootstrap support for L0PD23 as seed ortholog is 95%.

Group of orthologs #1036. Best score 92 bits
Score difference with first non-orthologous sequence - C.brenneri:92 P.jiroveci:92

G0NVZ9              	100.00%		L0PEF7              	100.00%
Bootstrap support for G0NVZ9 as seed ortholog is 100%.
Bootstrap support for L0PEF7 as seed ortholog is 100%.

Group of orthologs #1037. Best score 92 bits
Score difference with first non-orthologous sequence - C.brenneri:92 P.jiroveci:92

G0P6F2              	100.00%		L0PFK1              	100.00%
Bootstrap support for G0P6F2 as seed ortholog is 100%.
Bootstrap support for L0PFK1 as seed ortholog is 100%.

Group of orthologs #1038. Best score 91 bits
Score difference with first non-orthologous sequence - C.brenneri:47 P.jiroveci:91

G0N3U9              	100.00%		L0P9H0              	100.00%
G0PCW9              	100.00%		
G0PMZ4              	91.47%		
Bootstrap support for G0N3U9 as seed ortholog is 98%.
Bootstrap support for G0PCW9 as seed ortholog is 97%.
Bootstrap support for L0P9H0 as seed ortholog is 100%.

Group of orthologs #1039. Best score 91 bits
Score difference with first non-orthologous sequence - C.brenneri:91 P.jiroveci:91

G0NU54              	100.00%		L0P7D7              	100.00%
G0PEV8              	98.24%		
Bootstrap support for G0NU54 as seed ortholog is 100%.
Bootstrap support for L0P7D7 as seed ortholog is 100%.

Group of orthologs #1040. Best score 91 bits
Score difference with first non-orthologous sequence - C.brenneri:91 P.jiroveci:91

G0MCD4              	100.00%		L0P8G0              	100.00%
Bootstrap support for G0MCD4 as seed ortholog is 100%.
Bootstrap support for L0P8G0 as seed ortholog is 100%.

Group of orthologs #1041. Best score 91 bits
Score difference with first non-orthologous sequence - C.brenneri:91 P.jiroveci:91

G0ME46              	100.00%		L0PD45              	100.00%
Bootstrap support for G0ME46 as seed ortholog is 100%.
Bootstrap support for L0PD45 as seed ortholog is 100%.

Group of orthologs #1042. Best score 91 bits
Score difference with first non-orthologous sequence - C.brenneri:91 P.jiroveci:91

G0MNU7              	100.00%		L0PCT7              	100.00%
Bootstrap support for G0MNU7 as seed ortholog is 100%.
Bootstrap support for L0PCT7 as seed ortholog is 100%.

Group of orthologs #1043. Best score 91 bits
Score difference with first non-orthologous sequence - C.brenneri:91 P.jiroveci:91

G0N4X4              	100.00%		L0P9F8              	100.00%
Bootstrap support for G0N4X4 as seed ortholog is 100%.
Bootstrap support for L0P9F8 as seed ortholog is 100%.

Group of orthologs #1044. Best score 91 bits
Score difference with first non-orthologous sequence - C.brenneri:91 P.jiroveci:91

G0NDL8              	100.00%		L0PAT4              	100.00%
Bootstrap support for G0NDL8 as seed ortholog is 100%.
Bootstrap support for L0PAT4 as seed ortholog is 100%.

Group of orthologs #1045. Best score 91 bits
Score difference with first non-orthologous sequence - C.brenneri:91 P.jiroveci:91

G0NNZ9              	100.00%		L0P6Z5              	100.00%
Bootstrap support for G0NNZ9 as seed ortholog is 100%.
Bootstrap support for L0P6Z5 as seed ortholog is 100%.

Group of orthologs #1046. Best score 90 bits
Score difference with first non-orthologous sequence - C.brenneri:90 P.jiroveci:90

G0NVG5              	100.00%		L0PF82              	100.00%
G0NH76              	97.53%		
G0MVM1              	79.01%		
Bootstrap support for G0NVG5 as seed ortholog is 100%.
Bootstrap support for L0PF82 as seed ortholog is 100%.

Group of orthologs #1047. Best score 89 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:89

G0MFQ9              	100.00%		L0P7L2              	100.00%
G0NDS7              	9.60%		L0PFZ6              	98.57%
G0MZ56              	9.09%		
G0MZ58              	6.23%		
Bootstrap support for G0MFQ9 as seed ortholog is 100%.
Bootstrap support for L0P7L2 as seed ortholog is 100%.

Group of orthologs #1048. Best score 89 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:89

G0N2I6              	100.00%		L0PG39              	100.00%
G0MQN9              	56.85%		
Bootstrap support for G0N2I6 as seed ortholog is 100%.
Bootstrap support for L0PG39 as seed ortholog is 100%.

Group of orthologs #1049. Best score 89 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:89

G0P8M8              	100.00%		L0P9M3              	100.00%
G0MF34              	99.15%		
Bootstrap support for G0P8M8 as seed ortholog is 100%.
Bootstrap support for L0P9M3 as seed ortholog is 100%.

Group of orthologs #1050. Best score 89 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:89

G0PAM9              	100.00%		L0PCN8              	100.00%
G0M888              	23.03%		
Bootstrap support for G0PAM9 as seed ortholog is 100%.
Bootstrap support for L0PCN8 as seed ortholog is 100%.

Group of orthologs #1051. Best score 89 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:89

G0PMQ7              	100.00%		L0PDR9              	100.00%
                    	       		L0P8I3              	75.41%
Bootstrap support for G0PMQ7 as seed ortholog is 100%.
Bootstrap support for L0PDR9 as seed ortholog is 100%.

Group of orthologs #1052. Best score 89 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:89

G0ME05              	100.00%		L0PFZ7              	100.00%
Bootstrap support for G0ME05 as seed ortholog is 100%.
Bootstrap support for L0PFZ7 as seed ortholog is 100%.

Group of orthologs #1053. Best score 89 bits
Score difference with first non-orthologous sequence - C.brenneri:26 P.jiroveci:89

G0MQV2              	100.00%		L0PGC0              	100.00%
Bootstrap support for G0MQV2 as seed ortholog is 80%.
Bootstrap support for L0PGC0 as seed ortholog is 100%.

Group of orthologs #1054. Best score 89 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:89

G0N8Z5              	100.00%		L0PCF7              	100.00%
Bootstrap support for G0N8Z5 as seed ortholog is 100%.
Bootstrap support for L0PCF7 as seed ortholog is 100%.

Group of orthologs #1055. Best score 89 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:89

G0NWH4              	100.00%		L0P9F2              	100.00%
Bootstrap support for G0NWH4 as seed ortholog is 100%.
Bootstrap support for L0P9F2 as seed ortholog is 100%.

Group of orthologs #1056. Best score 89 bits
Score difference with first non-orthologous sequence - C.brenneri:42 P.jiroveci:35

G0NVS8              	100.00%		L0PCQ5              	100.00%
Bootstrap support for G0NVS8 as seed ortholog is 99%.
Bootstrap support for L0PCQ5 as seed ortholog is 98%.

Group of orthologs #1057. Best score 89 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:89

G0PLD9              	100.00%		L0PBJ2              	100.00%
Bootstrap support for G0PLD9 as seed ortholog is 100%.
Bootstrap support for L0PBJ2 as seed ortholog is 100%.

Group of orthologs #1058. Best score 89 bits
Score difference with first non-orthologous sequence - C.brenneri:89 P.jiroveci:89

G0PP19              	100.00%		L0PA83              	100.00%
Bootstrap support for G0PP19 as seed ortholog is 100%.
Bootstrap support for L0PA83 as seed ortholog is 100%.

Group of orthologs #1059. Best score 88 bits
Score difference with first non-orthologous sequence - C.brenneri:88 P.jiroveci:88

G0NXZ5              	100.00%		L0P7T7              	100.00%
G0NXZ2              	98.92%		
Bootstrap support for G0NXZ5 as seed ortholog is 100%.
Bootstrap support for L0P7T7 as seed ortholog is 100%.

Group of orthologs #1060. Best score 87 bits
Score difference with first non-orthologous sequence - C.brenneri:87 P.jiroveci:87

G0MT83              	100.00%		L0P6R0              	100.00%
G0PI40              	99.49%		
Bootstrap support for G0MT83 as seed ortholog is 100%.
Bootstrap support for L0P6R0 as seed ortholog is 100%.

Group of orthologs #1061. Best score 87 bits
Score difference with first non-orthologous sequence - C.brenneri:87 P.jiroveci:87

G0NET8              	100.00%		L0PHI8              	100.00%
G0PNH0              	100.00%		
Bootstrap support for G0NET8 as seed ortholog is 100%.
Bootstrap support for G0PNH0 as seed ortholog is 100%.
Bootstrap support for L0PHI8 as seed ortholog is 100%.

Group of orthologs #1062. Best score 87 bits
Score difference with first non-orthologous sequence - C.brenneri:87 P.jiroveci:87

G0PB36              	100.00%		L0PBK8              	100.00%
G0NKL3              	99.28%		
Bootstrap support for G0PB36 as seed ortholog is 100%.
Bootstrap support for L0PBK8 as seed ortholog is 100%.

Group of orthologs #1063. Best score 87 bits
Score difference with first non-orthologous sequence - C.brenneri:87 P.jiroveci:87

G0PGC3              	100.00%		L0PE10              	100.00%
G0N1K9              	10.87%		
Bootstrap support for G0PGC3 as seed ortholog is 100%.
Bootstrap support for L0PE10 as seed ortholog is 100%.

Group of orthologs #1064. Best score 87 bits
Score difference with first non-orthologous sequence - C.brenneri:87 P.jiroveci:87

G0MNW5              	100.00%		L0P9U0              	100.00%
Bootstrap support for G0MNW5 as seed ortholog is 100%.
Bootstrap support for L0P9U0 as seed ortholog is 100%.

Group of orthologs #1065. Best score 87 bits
Score difference with first non-orthologous sequence - C.brenneri:87 P.jiroveci:87

G0MYV7              	100.00%		L0PBX5              	100.00%
Bootstrap support for G0MYV7 as seed ortholog is 100%.
Bootstrap support for L0PBX5 as seed ortholog is 100%.

Group of orthologs #1066. Best score 87 bits
Score difference with first non-orthologous sequence - C.brenneri:87 P.jiroveci:87

G0N937              	100.00%		L0PC85              	100.00%
Bootstrap support for G0N937 as seed ortholog is 100%.
Bootstrap support for L0PC85 as seed ortholog is 100%.

Group of orthologs #1067. Best score 86 bits
Score difference with first non-orthologous sequence - C.brenneri:86 P.jiroveci:86

G0MZM0              	100.00%		L0PBK9              	100.00%
G0PIW8              	7.62%		
Bootstrap support for G0MZM0 as seed ortholog is 100%.
Bootstrap support for L0PBK9 as seed ortholog is 100%.

Group of orthologs #1068. Best score 86 bits
Score difference with first non-orthologous sequence - C.brenneri:86 P.jiroveci:86

G0MG93              	100.00%		L0PAS5              	100.00%
Bootstrap support for G0MG93 as seed ortholog is 100%.
Bootstrap support for L0PAS5 as seed ortholog is 100%.

Group of orthologs #1069. Best score 86 bits
Score difference with first non-orthologous sequence - C.brenneri:86 P.jiroveci:86

G0ML81              	100.00%		L0PDG4              	100.00%
Bootstrap support for G0ML81 as seed ortholog is 100%.
Bootstrap support for L0PDG4 as seed ortholog is 100%.

Group of orthologs #1070. Best score 86 bits
Score difference with first non-orthologous sequence - C.brenneri:86 P.jiroveci:86

G0MKU5              	100.00%		L0PFV9              	100.00%
Bootstrap support for G0MKU5 as seed ortholog is 100%.
Bootstrap support for L0PFV9 as seed ortholog is 100%.

Group of orthologs #1071. Best score 86 bits
Score difference with first non-orthologous sequence - C.brenneri:19 P.jiroveci:86

G0MVE7              	100.00%		L0PB27              	100.00%
Bootstrap support for G0MVE7 as seed ortholog is 78%.
Bootstrap support for L0PB27 as seed ortholog is 100%.

Group of orthologs #1072. Best score 86 bits
Score difference with first non-orthologous sequence - C.brenneri:25 P.jiroveci:86

G0N7P8              	100.00%		L0P9B7              	100.00%
Bootstrap support for G0N7P8 as seed ortholog is 87%.
Bootstrap support for L0P9B7 as seed ortholog is 100%.

Group of orthologs #1073. Best score 86 bits
Score difference with first non-orthologous sequence - C.brenneri:86 P.jiroveci:86

G0P1V2              	100.00%		L0P9T8              	100.00%
Bootstrap support for G0P1V2 as seed ortholog is 100%.
Bootstrap support for L0P9T8 as seed ortholog is 100%.

Group of orthologs #1074. Best score 86 bits
Score difference with first non-orthologous sequence - C.brenneri:86 P.jiroveci:86

G0P7S4              	100.00%		L0PCX6              	100.00%
Bootstrap support for G0P7S4 as seed ortholog is 100%.
Bootstrap support for L0PCX6 as seed ortholog is 100%.

Group of orthologs #1075. Best score 86 bits
Score difference with first non-orthologous sequence - C.brenneri:30 P.jiroveci:86

G0PGS5              	100.00%		L0PFQ6              	100.00%
Bootstrap support for G0PGS5 as seed ortholog is 83%.
Bootstrap support for L0PFQ6 as seed ortholog is 100%.

Group of orthologs #1076. Best score 85 bits
Score difference with first non-orthologous sequence - C.brenneri:85 P.jiroveci:85

G0MEK8              	100.00%		L0P8R9              	100.00%
Bootstrap support for G0MEK8 as seed ortholog is 100%.
Bootstrap support for L0P8R9 as seed ortholog is 100%.

Group of orthologs #1077. Best score 85 bits
Score difference with first non-orthologous sequence - C.brenneri:85 P.jiroveci:85

G0MJJ1              	100.00%		L0PCB4              	100.00%
Bootstrap support for G0MJJ1 as seed ortholog is 100%.
Bootstrap support for L0PCB4 as seed ortholog is 100%.

Group of orthologs #1078. Best score 85 bits
Score difference with first non-orthologous sequence - C.brenneri:85 P.jiroveci:85

G0N9L4              	100.00%		L0PGR9              	100.00%
Bootstrap support for G0N9L4 as seed ortholog is 100%.
Bootstrap support for L0PGR9 as seed ortholog is 100%.

Group of orthologs #1079. Best score 84 bits
Score difference with first non-orthologous sequence - C.brenneri:42 P.jiroveci:84

G0MAG7              	100.00%		L0PHH5              	100.00%
G0NPX0              	6.91%		
Bootstrap support for G0MAG7 as seed ortholog is 98%.
Bootstrap support for L0PHH5 as seed ortholog is 100%.

Group of orthologs #1080. Best score 84 bits
Score difference with first non-orthologous sequence - C.brenneri:30 P.jiroveci:84

G0MGY7              	100.00%		L0PB42              	100.00%
G0MNV9              	51.09%		
Bootstrap support for G0MGY7 as seed ortholog is 92%.
Bootstrap support for L0PB42 as seed ortholog is 100%.

Group of orthologs #1081. Best score 84 bits
Score difference with first non-orthologous sequence - C.brenneri:84 P.jiroveci:84

G0NH91              	100.00%		L0PBA3              	100.00%
G0NVF1              	100.00%		
Bootstrap support for G0NH91 as seed ortholog is 100%.
Bootstrap support for G0NVF1 as seed ortholog is 100%.
Bootstrap support for L0PBA3 as seed ortholog is 100%.

Group of orthologs #1082. Best score 84 bits
Score difference with first non-orthologous sequence - C.brenneri:84 P.jiroveci:84

G0P5U2              	100.00%		L0PG56              	100.00%
G0PJB8              	100.00%		
Bootstrap support for G0P5U2 as seed ortholog is 100%.
Bootstrap support for G0PJB8 as seed ortholog is 100%.
Bootstrap support for L0PG56 as seed ortholog is 100%.

Group of orthologs #1083. Best score 84 bits
Score difference with first non-orthologous sequence - C.brenneri:84 P.jiroveci:84

G0PKI4              	100.00%		L0PEH0              	100.00%
G0NAW1              	99.49%		
Bootstrap support for G0PKI4 as seed ortholog is 100%.
Bootstrap support for L0PEH0 as seed ortholog is 100%.

Group of orthologs #1084. Best score 84 bits
Score difference with first non-orthologous sequence - C.brenneri:84 P.jiroveci:84

G0MLC1              	100.00%		L0PE40              	100.00%
Bootstrap support for G0MLC1 as seed ortholog is 100%.
Bootstrap support for L0PE40 as seed ortholog is 100%.

Group of orthologs #1085. Best score 84 bits
Score difference with first non-orthologous sequence - C.brenneri:84 P.jiroveci:84

G0N6K2              	100.00%		L0P8G4              	100.00%
Bootstrap support for G0N6K2 as seed ortholog is 100%.
Bootstrap support for L0P8G4 as seed ortholog is 100%.

Group of orthologs #1086. Best score 84 bits
Score difference with first non-orthologous sequence - C.brenneri:84 P.jiroveci:84

G0NBT4              	100.00%		L0PD91              	100.00%
Bootstrap support for G0NBT4 as seed ortholog is 100%.
Bootstrap support for L0PD91 as seed ortholog is 100%.

Group of orthologs #1087. Best score 83 bits
Score difference with first non-orthologous sequence - C.brenneri:83 P.jiroveci:83

G0NK74              	100.00%		L0PFF8              	100.00%
Bootstrap support for G0NK74 as seed ortholog is 100%.
Bootstrap support for L0PFF8 as seed ortholog is 100%.

Group of orthologs #1088. Best score 83 bits
Score difference with first non-orthologous sequence - C.brenneri:83 P.jiroveci:83

G0PMT4              	100.00%		L0P7S5              	100.00%
Bootstrap support for G0PMT4 as seed ortholog is 100%.
Bootstrap support for L0P7S5 as seed ortholog is 100%.

Group of orthologs #1089. Best score 82 bits
Score difference with first non-orthologous sequence - C.brenneri:82 P.jiroveci:82

G0NK91              	100.00%		L0PFR7              	100.00%
G0M977              	24.12%		
G0NKR3              	23.67%		
G0N4C3              	21.40%		
G0P1P2              	20.95%		
G0N4D5              	20.61%		
G0MWM8              	16.76%		
Bootstrap support for G0NK91 as seed ortholog is 100%.
Bootstrap support for L0PFR7 as seed ortholog is 100%.

Group of orthologs #1090. Best score 82 bits
Score difference with first non-orthologous sequence - C.brenneri:82 P.jiroveci:82

G0MTG6              	100.00%		L0P911              	100.00%
Bootstrap support for G0MTG6 as seed ortholog is 100%.
Bootstrap support for L0P911 as seed ortholog is 100%.

Group of orthologs #1091. Best score 82 bits
Score difference with first non-orthologous sequence - C.brenneri:82 P.jiroveci:82

G0NZ11              	100.00%		L0P887              	100.00%
Bootstrap support for G0NZ11 as seed ortholog is 100%.
Bootstrap support for L0P887 as seed ortholog is 100%.

Group of orthologs #1092. Best score 82 bits
Score difference with first non-orthologous sequence - C.brenneri:82 P.jiroveci:82

G0PII2              	100.00%		L0P8E1              	100.00%
Bootstrap support for G0PII2 as seed ortholog is 100%.
Bootstrap support for L0P8E1 as seed ortholog is 100%.

Group of orthologs #1093. Best score 81 bits
Score difference with first non-orthologous sequence - C.brenneri:30 P.jiroveci:81

G0NQ90              	100.00%		L0P982              	100.00%
G0NQ53              	100.00%		L0PB40              	100.00%
G0NQ54              	88.93%		
G0NQ52              	88.38%		
G0N9B9              	32.53%		
G0NM82              	8.48%		
G0NHD8              	5.54%		
G0NVJ1              	5.54%		
Bootstrap support for G0NQ90 as seed ortholog is 81%.
Bootstrap support for G0NQ53 as seed ortholog is 85%.
Bootstrap support for L0P982 as seed ortholog is 100%.
Bootstrap support for L0PB40 as seed ortholog is 100%.

Group of orthologs #1094. Best score 81 bits
Score difference with first non-orthologous sequence - C.brenneri:81 P.jiroveci:81

G0NAY5              	100.00%		L0PEQ2              	100.00%
G0PDG6              	65.05%		L0P999              	61.46%
Bootstrap support for G0NAY5 as seed ortholog is 100%.
Bootstrap support for L0PEQ2 as seed ortholog is 100%.

Group of orthologs #1095. Best score 81 bits
Score difference with first non-orthologous sequence - C.brenneri:18 P.jiroveci:81

B6VBL2              	100.00%		L0PAD3              	100.00%
G0NXV4              	100.00%		
Bootstrap support for B6VBL2 as seed ortholog is 71%.
Alternative seed ortholog is G0N4N4 (18 bits away from this cluster)
Bootstrap support for G0NXV4 as seed ortholog is 74%.
Alternative seed ortholog is G0N4N4 (18 bits away from this cluster)
Bootstrap support for L0PAD3 as seed ortholog is 100%.

Group of orthologs #1096. Best score 81 bits
Score difference with first non-orthologous sequence - C.brenneri:17 P.jiroveci:81

G0MKD6              	100.00%		L0PCE5              	100.00%
                    	       		L0PBD3              	5.09%
Bootstrap support for G0MKD6 as seed ortholog is 66%.
Alternative seed ortholog is G0N8Y1 (17 bits away from this cluster)
Bootstrap support for L0PCE5 as seed ortholog is 100%.

Group of orthologs #1097. Best score 81 bits
Score difference with first non-orthologous sequence - C.brenneri:18 P.jiroveci:81

G0N9P5              	100.00%		L0P9W7              	100.00%
G0PLB5              	100.00%		
Bootstrap support for G0N9P5 as seed ortholog is 78%.
Bootstrap support for G0PLB5 as seed ortholog is 78%.
Bootstrap support for L0P9W7 as seed ortholog is 100%.

Group of orthologs #1098. Best score 81 bits
Score difference with first non-orthologous sequence - C.brenneri:81 P.jiroveci:81

G0NRG1              	100.00%		L0PAS9              	100.00%
G0N5L3              	8.52%		
Bootstrap support for G0NRG1 as seed ortholog is 100%.
Bootstrap support for L0PAS9 as seed ortholog is 100%.

Group of orthologs #1099. Best score 81 bits
Score difference with first non-orthologous sequence - C.brenneri:81 P.jiroveci:81

G0PEH8              	100.00%		L0PCI2              	100.00%
G0NJN9              	99.78%		
Bootstrap support for G0PEH8 as seed ortholog is 100%.
Bootstrap support for L0PCI2 as seed ortholog is 100%.

Group of orthologs #1100. Best score 81 bits
Score difference with first non-orthologous sequence - C.brenneri:81 P.jiroveci:81

G0MRG3              	100.00%		L0PE32              	100.00%
Bootstrap support for G0MRG3 as seed ortholog is 100%.
Bootstrap support for L0PE32 as seed ortholog is 100%.

Group of orthologs #1101. Best score 80 bits
Score difference with first non-orthologous sequence - C.brenneri:80 P.jiroveci:80

G0NVQ7              	100.00%		L0PBX9              	100.00%
Bootstrap support for G0NVQ7 as seed ortholog is 100%.
Bootstrap support for L0PBX9 as seed ortholog is 100%.

Group of orthologs #1102. Best score 79 bits
Score difference with first non-orthologous sequence - C.brenneri:79 P.jiroveci:79

G0N9B2              	100.00%		L0P8W8              	100.00%
                    	       		L0P9K5              	57.58%
Bootstrap support for G0N9B2 as seed ortholog is 100%.
Bootstrap support for L0P8W8 as seed ortholog is 100%.

Group of orthologs #1103. Best score 79 bits
Score difference with first non-orthologous sequence - C.brenneri:79 P.jiroveci:79

G0NF86              	100.00%		L0PEF8              	100.00%
G0PJZ8              	100.00%		
Bootstrap support for G0NF86 as seed ortholog is 100%.
Bootstrap support for G0PJZ8 as seed ortholog is 100%.
Bootstrap support for L0PEF8 as seed ortholog is 100%.

Group of orthologs #1104. Best score 79 bits
Score difference with first non-orthologous sequence - C.brenneri:79 P.jiroveci:79

G0NJR0              	100.00%		L0PHP6              	100.00%
G0PDS0              	99.44%		
Bootstrap support for G0NJR0 as seed ortholog is 100%.
Bootstrap support for L0PHP6 as seed ortholog is 100%.

Group of orthologs #1105. Best score 79 bits
Score difference with first non-orthologous sequence - C.brenneri:79 P.jiroveci:79

G0PIF3              	100.00%		L0PAY0              	100.00%
G0PDP7              	97.26%		
Bootstrap support for G0PIF3 as seed ortholog is 100%.
Bootstrap support for L0PAY0 as seed ortholog is 100%.

Group of orthologs #1106. Best score 79 bits
Score difference with first non-orthologous sequence - C.brenneri:79 P.jiroveci:79

G0PEC4              	100.00%		L0PFC4              	100.00%
G0MRJ1              	97.83%		
Bootstrap support for G0PEC4 as seed ortholog is 100%.
Bootstrap support for L0PFC4 as seed ortholog is 100%.

Group of orthologs #1107. Best score 79 bits
Score difference with first non-orthologous sequence - C.brenneri:17 P.jiroveci:79

B6VBA2              	100.00%		L0PFM9              	100.00%
Bootstrap support for B6VBA2 as seed ortholog is 87%.
Bootstrap support for L0PFM9 as seed ortholog is 100%.

Group of orthologs #1108. Best score 79 bits
Score difference with first non-orthologous sequence - C.brenneri:79 P.jiroveci:32

G0NVS6              	100.00%		L0PFT5              	100.00%
Bootstrap support for G0NVS6 as seed ortholog is 100%.
Bootstrap support for L0PFT5 as seed ortholog is 89%.

Group of orthologs #1109. Best score 79 bits
Score difference with first non-orthologous sequence - C.brenneri:79 P.jiroveci:79

G0NZX4              	100.00%		L0PGS0              	100.00%
Bootstrap support for G0NZX4 as seed ortholog is 100%.
Bootstrap support for L0PGS0 as seed ortholog is 100%.

Group of orthologs #1110. Best score 79 bits
Score difference with first non-orthologous sequence - C.brenneri:79 P.jiroveci:79

G0P9F7              	100.00%		L0P7C7              	100.00%
Bootstrap support for G0P9F7 as seed ortholog is 100%.
Bootstrap support for L0P7C7 as seed ortholog is 100%.

Group of orthologs #1111. Best score 78 bits
Score difference with first non-orthologous sequence - C.brenneri:78 P.jiroveci:78

G0N6Z1              	100.00%		L0PB53              	100.00%
G0PCL3              	99.42%		
Bootstrap support for G0N6Z1 as seed ortholog is 100%.
Bootstrap support for L0PB53 as seed ortholog is 100%.

Group of orthologs #1112. Best score 78 bits
Score difference with first non-orthologous sequence - C.brenneri:78 P.jiroveci:78

G0MBQ0              	100.00%		L0PEX4              	100.00%
Bootstrap support for G0MBQ0 as seed ortholog is 100%.
Bootstrap support for L0PEX4 as seed ortholog is 100%.

Group of orthologs #1113. Best score 78 bits
Score difference with first non-orthologous sequence - C.brenneri:78 P.jiroveci:78

G0MVS0              	100.00%		L0P9K1              	100.00%
Bootstrap support for G0MVS0 as seed ortholog is 100%.
Bootstrap support for L0P9K1 as seed ortholog is 100%.

Group of orthologs #1114. Best score 78 bits
Score difference with first non-orthologous sequence - C.brenneri:78 P.jiroveci:78

G0MYL7              	100.00%		L0PF70              	100.00%
Bootstrap support for G0MYL7 as seed ortholog is 100%.
Bootstrap support for L0PF70 as seed ortholog is 100%.

Group of orthologs #1115. Best score 78 bits
Score difference with first non-orthologous sequence - C.brenneri:78 P.jiroveci:78

G0N7K6              	100.00%		L0PDY4              	100.00%
Bootstrap support for G0N7K6 as seed ortholog is 100%.
Bootstrap support for L0PDY4 as seed ortholog is 100%.

Group of orthologs #1116. Best score 77 bits
Score difference with first non-orthologous sequence - C.brenneri:77 P.jiroveci:77

G0PGV8              	100.00%		L0P9T3              	100.00%
G0N2L4              	17.35%		
Bootstrap support for G0PGV8 as seed ortholog is 100%.
Bootstrap support for L0P9T3 as seed ortholog is 100%.

Group of orthologs #1117. Best score 77 bits
Score difference with first non-orthologous sequence - C.brenneri:77 P.jiroveci:77

G0N9E9              	100.00%		L0P883              	100.00%
Bootstrap support for G0N9E9 as seed ortholog is 100%.
Bootstrap support for L0P883 as seed ortholog is 100%.

Group of orthologs #1118. Best score 77 bits
Score difference with first non-orthologous sequence - C.brenneri:77 P.jiroveci:77

G0P4V7              	100.00%		L0PEQ9              	100.00%
Bootstrap support for G0P4V7 as seed ortholog is 100%.
Bootstrap support for L0PEQ9 as seed ortholog is 100%.

Group of orthologs #1119. Best score 77 bits
Score difference with first non-orthologous sequence - C.brenneri:77 P.jiroveci:77

G0PL18              	100.00%		L0PGZ4              	100.00%
Bootstrap support for G0PL18 as seed ortholog is 100%.
Bootstrap support for L0PGZ4 as seed ortholog is 100%.

Group of orthologs #1120. Best score 76 bits
Score difference with first non-orthologous sequence - C.brenneri:76 P.jiroveci:76

G0PGA1              	100.00%		L0PBQ5              	100.00%
G0PGA3              	45.30%		
G0PGA5              	37.58%		
G0PGA4              	36.91%		
G0PFZ6              	22.48%		
G0MZ41              	20.81%		
G0MPV9              	19.13%		
G0PFZ3              	13.09%		
G0MZ36              	12.75%		
G0MZ40              	12.08%		
G0PFZ5              	9.73%		
Bootstrap support for G0PGA1 as seed ortholog is 100%.
Bootstrap support for L0PBQ5 as seed ortholog is 100%.

Group of orthologs #1121. Best score 76 bits
Score difference with first non-orthologous sequence - C.brenneri:76 P.jiroveci:76

G0NLG1              	100.00%		L0P8Y9              	100.00%
G0NPZ2              	99.76%		
G0PCG9              	37.74%		
G0MEZ2              	35.58%		
Bootstrap support for G0NLG1 as seed ortholog is 100%.
Bootstrap support for L0P8Y9 as seed ortholog is 100%.

Group of orthologs #1122. Best score 76 bits
Score difference with first non-orthologous sequence - C.brenneri:76 P.jiroveci:76

B6VBI7              	100.00%		L0PAT3              	100.00%
G0MP40              	23.74%		
Bootstrap support for B6VBI7 as seed ortholog is 100%.
Bootstrap support for L0PAT3 as seed ortholog is 100%.

Group of orthologs #1123. Best score 76 bits
Score difference with first non-orthologous sequence - C.brenneri:76 P.jiroveci:76

G0MQ88              	100.00%		L0P9H1              	100.00%
G0P998              	79.09%		
Bootstrap support for G0MQ88 as seed ortholog is 100%.
Bootstrap support for L0P9H1 as seed ortholog is 100%.

Group of orthologs #1124. Best score 76 bits
Score difference with first non-orthologous sequence - C.brenneri:76 P.jiroveci:76

G0NAW0              	100.00%		L0P9T1              	100.00%
G0PKI3              	64.36%		
Bootstrap support for G0NAW0 as seed ortholog is 100%.
Bootstrap support for L0P9T1 as seed ortholog is 100%.

Group of orthologs #1125. Best score 76 bits
Score difference with first non-orthologous sequence - C.brenneri:76 P.jiroveci:76

G0P9Q0              	100.00%		L0PA59              	100.00%
G0PMA0              	64.69%		
Bootstrap support for G0P9Q0 as seed ortholog is 100%.
Bootstrap support for L0PA59 as seed ortholog is 100%.

Group of orthologs #1126. Best score 76 bits
Score difference with first non-orthologous sequence - C.brenneri:76 P.jiroveci:76

G0N4X6              	100.00%		L0PCV9              	100.00%
Bootstrap support for G0N4X6 as seed ortholog is 100%.
Bootstrap support for L0PCV9 as seed ortholog is 100%.

Group of orthologs #1127. Best score 76 bits
Score difference with first non-orthologous sequence - C.brenneri:76 P.jiroveci:76

G0PEX0              	100.00%		L0PB77              	100.00%
Bootstrap support for G0PEX0 as seed ortholog is 100%.
Bootstrap support for L0PB77 as seed ortholog is 100%.

Group of orthologs #1128. Best score 75 bits
Score difference with first non-orthologous sequence - C.brenneri:18 P.jiroveci:75

G0NMH6              	100.00%		L0PA37              	100.00%
G0NMG6              	54.74%		
Bootstrap support for G0NMH6 as seed ortholog is 83%.
Bootstrap support for L0PA37 as seed ortholog is 100%.

Group of orthologs #1129. Best score 75 bits
Score difference with first non-orthologous sequence - C.brenneri:75 P.jiroveci:75

G0NSF1              	100.00%		L0PFF4              	100.00%
G0NSJ6              	99.53%		
Bootstrap support for G0NSF1 as seed ortholog is 100%.
Bootstrap support for L0PFF4 as seed ortholog is 100%.

Group of orthologs #1130. Best score 75 bits
Score difference with first non-orthologous sequence - C.brenneri:75 P.jiroveci:75

G0MLC6              	100.00%		L0PFT3              	100.00%
Bootstrap support for G0MLC6 as seed ortholog is 100%.
Bootstrap support for L0PFT3 as seed ortholog is 100%.

Group of orthologs #1131. Best score 75 bits
Score difference with first non-orthologous sequence - C.brenneri:75 P.jiroveci:75

G0MSA4              	100.00%		L0PCF2              	100.00%
Bootstrap support for G0MSA4 as seed ortholog is 100%.
Bootstrap support for L0PCF2 as seed ortholog is 100%.

Group of orthologs #1132. Best score 75 bits
Score difference with first non-orthologous sequence - C.brenneri:75 P.jiroveci:75

G0N6Y6              	100.00%		L0PBZ3              	100.00%
Bootstrap support for G0N6Y6 as seed ortholog is 100%.
Bootstrap support for L0PBZ3 as seed ortholog is 100%.

Group of orthologs #1133. Best score 74 bits
Score difference with first non-orthologous sequence - C.brenneri:74 P.jiroveci:74

G0MKY5              	100.00%		L0PA74              	100.00%
Bootstrap support for G0MKY5 as seed ortholog is 100%.
Bootstrap support for L0PA74 as seed ortholog is 100%.

Group of orthologs #1134. Best score 74 bits
Score difference with first non-orthologous sequence - C.brenneri:74 P.jiroveci:74

G0MS72              	100.00%		L0PCC2              	100.00%
Bootstrap support for G0MS72 as seed ortholog is 100%.
Bootstrap support for L0PCC2 as seed ortholog is 100%.

Group of orthologs #1135. Best score 74 bits
Score difference with first non-orthologous sequence - C.brenneri:74 P.jiroveci:74

G0N5K7              	100.00%		L0PB99              	100.00%
Bootstrap support for G0N5K7 as seed ortholog is 100%.
Bootstrap support for L0PB99 as seed ortholog is 100%.

Group of orthologs #1136. Best score 73 bits
Score difference with first non-orthologous sequence - C.brenneri:15 P.jiroveci:26

G0MXV6              	100.00%		L0PFG2              	100.00%
G0MXV5              	37.85%		
Bootstrap support for G0MXV6 as seed ortholog is 65%.
Alternative seed ortholog is G0NW68 (15 bits away from this cluster)
Bootstrap support for L0PFG2 as seed ortholog is 82%.

Group of orthologs #1137. Best score 73 bits
Score difference with first non-orthologous sequence - C.brenneri:73 P.jiroveci:73

G0NRV1              	100.00%		L0PFN7              	100.00%
Bootstrap support for G0NRV1 as seed ortholog is 100%.
Bootstrap support for L0PFN7 as seed ortholog is 100%.

Group of orthologs #1138. Best score 72 bits
Score difference with first non-orthologous sequence - C.brenneri:14 P.jiroveci:72

G0MTA4              	100.00%		L0P8G6              	100.00%
G0N962              	37.15%		
G0PMP9              	13.08%		
G0MT43              	12.85%		
G0N8T3              	12.62%		
G0MT58              	11.21%		
G0N8S3              	11.21%		
G0PGX3              	10.98%		
G0M909              	10.75%		
G0MT42              	10.51%		
G0MT54              	9.81%		
G0PK55              	9.35%		
G0PGX5              	9.11%		
G0MT50              	8.64%		
G0P7X0              	8.64%		
G0MTY0              	8.41%		
G0PAJ7              	8.41%		
G0NMT4              	8.18%		
G0PM55              	8.18%		
G0MT48              	7.24%		
G0MT51              	7.01%		
G0P7X1              	7.01%		
G0PM54              	7.01%		
G0PK54              	6.78%		
G0PM56              	6.31%		
G0PCL8              	5.61%		
G0P0T5              	5.61%		
G0PE94              	5.61%		
G0PE93              	5.61%		
G0N961              	5.14%		
Bootstrap support for G0MTA4 as seed ortholog is 66%.
Alternative seed ortholog is G0NIK0 (14 bits away from this cluster)
Bootstrap support for L0P8G6 as seed ortholog is 100%.

Group of orthologs #1139. Best score 72 bits
Score difference with first non-orthologous sequence - C.brenneri:72 P.jiroveci:72

G0N2A4              	100.00%		L0PFB3              	100.00%
G0N2A3              	16.76%		
Bootstrap support for G0N2A4 as seed ortholog is 100%.
Bootstrap support for L0PFB3 as seed ortholog is 100%.

Group of orthologs #1140. Best score 72 bits
Score difference with first non-orthologous sequence - C.brenneri:72 P.jiroveci:72

G0NFQ6              	100.00%		L0PHQ1              	100.00%
G0NPH1              	100.00%		
Bootstrap support for G0NFQ6 as seed ortholog is 100%.
Bootstrap support for G0NPH1 as seed ortholog is 100%.
Bootstrap support for L0PHQ1 as seed ortholog is 100%.

Group of orthologs #1141. Best score 72 bits
Score difference with first non-orthologous sequence - C.brenneri:72 P.jiroveci:72

G0NS69              	100.00%		L0P831              	100.00%
                    	       		L0PDC1              	42.12%
Bootstrap support for G0NS69 as seed ortholog is 100%.
Bootstrap support for L0P831 as seed ortholog is 100%.

Group of orthologs #1142. Best score 72 bits
Score difference with first non-orthologous sequence - C.brenneri:72 P.jiroveci:72

G0MCG4              	100.00%		L0PFM0              	100.00%
Bootstrap support for G0MCG4 as seed ortholog is 100%.
Bootstrap support for L0PFM0 as seed ortholog is 100%.

Group of orthologs #1143. Best score 71 bits
Score difference with first non-orthologous sequence - C.brenneri:71 P.jiroveci:71

G0PBI7              	100.00%		L0PB58              	100.00%
G0NYM1              	50.53%		
Bootstrap support for G0PBI7 as seed ortholog is 100%.
Bootstrap support for L0PB58 as seed ortholog is 100%.

Group of orthologs #1144. Best score 71 bits
Score difference with first non-orthologous sequence - C.brenneri:11 P.jiroveci:71

G0MK74              	100.00%		L0PE14              	100.00%
Bootstrap support for G0MK74 as seed ortholog is 76%.
Bootstrap support for L0PE14 as seed ortholog is 100%.

Group of orthologs #1145. Best score 71 bits
Score difference with first non-orthologous sequence - C.brenneri:71 P.jiroveci:71

G0MZX2              	100.00%		L0P8Q8              	100.00%
Bootstrap support for G0MZX2 as seed ortholog is 100%.
Bootstrap support for L0P8Q8 as seed ortholog is 100%.

Group of orthologs #1146. Best score 71 bits
Score difference with first non-orthologous sequence - C.brenneri:71 P.jiroveci:71

G0N969              	100.00%		L0PAZ4              	100.00%
Bootstrap support for G0N969 as seed ortholog is 100%.
Bootstrap support for L0PAZ4 as seed ortholog is 100%.

Group of orthologs #1147. Best score 71 bits
Score difference with first non-orthologous sequence - C.brenneri:71 P.jiroveci:71

G0NAE3              	100.00%		L0PEV0              	100.00%
Bootstrap support for G0NAE3 as seed ortholog is 100%.
Bootstrap support for L0PEV0 as seed ortholog is 100%.

Group of orthologs #1148. Best score 71 bits
Score difference with first non-orthologous sequence - C.brenneri:71 P.jiroveci:71

G0NRG7              	100.00%		L0P8B8              	100.00%
Bootstrap support for G0NRG7 as seed ortholog is 100%.
Bootstrap support for L0P8B8 as seed ortholog is 100%.

Group of orthologs #1149. Best score 71 bits
Score difference with first non-orthologous sequence - C.brenneri:71 P.jiroveci:71

G0NZW8              	100.00%		L0PB39              	100.00%
Bootstrap support for G0NZW8 as seed ortholog is 100%.
Bootstrap support for L0PB39 as seed ortholog is 100%.

Group of orthologs #1150. Best score 70 bits
Score difference with first non-orthologous sequence - C.brenneri:70 P.jiroveci:70

G0MV89              	100.00%		L0PB78              	100.00%
G0MV88              	40.51%		
G0MC17              	11.07%		
G0PI86              	6.32%		
Bootstrap support for G0MV89 as seed ortholog is 100%.
Bootstrap support for L0PB78 as seed ortholog is 100%.

Group of orthologs #1151. Best score 70 bits
Score difference with first non-orthologous sequence - C.brenneri:3 P.jiroveci:70

G0N3U2              	100.00%		L0PBS7              	100.00%
G0PH06              	95.03%		
G0M8B0              	8.39%		
G0N758              	6.40%		
Bootstrap support for G0N3U2 as seed ortholog is 42%.
Alternative seed ortholog is G0P5I0 (3 bits away from this cluster)
Bootstrap support for L0PBS7 as seed ortholog is 100%.

Group of orthologs #1152. Best score 70 bits
Score difference with first non-orthologous sequence - C.brenneri:70 P.jiroveci:70

G0MW69              	100.00%		L0PEK0              	100.00%
Bootstrap support for G0MW69 as seed ortholog is 100%.
Bootstrap support for L0PEK0 as seed ortholog is 100%.

Group of orthologs #1153. Best score 70 bits
Score difference with first non-orthologous sequence - C.brenneri:21 P.jiroveci:70

G0NFQ7              	100.00%		L0PAD6              	100.00%
Bootstrap support for G0NFQ7 as seed ortholog is 72%.
Alternative seed ortholog is G0NAU4 (21 bits away from this cluster)
Bootstrap support for L0PAD6 as seed ortholog is 100%.

Group of orthologs #1154. Best score 70 bits
Score difference with first non-orthologous sequence - C.brenneri:70 P.jiroveci:70

G0NM71              	100.00%		L0P9U7              	100.00%
Bootstrap support for G0NM71 as seed ortholog is 100%.
Bootstrap support for L0P9U7 as seed ortholog is 100%.

Group of orthologs #1155. Best score 69 bits
Score difference with first non-orthologous sequence - C.brenneri:69 P.jiroveci:69

G0PEW3              	100.00%		L0PDX4              	100.00%
G0NU59              	90.04%		
Bootstrap support for G0PEW3 as seed ortholog is 100%.
Bootstrap support for L0PDX4 as seed ortholog is 100%.

Group of orthologs #1156. Best score 69 bits
Score difference with first non-orthologous sequence - C.brenneri:69 P.jiroveci:69

G0MLD9              	100.00%		L0PAT8              	100.00%
Bootstrap support for G0MLD9 as seed ortholog is 100%.
Bootstrap support for L0PAT8 as seed ortholog is 100%.

Group of orthologs #1157. Best score 69 bits
Score difference with first non-orthologous sequence - C.brenneri:69 P.jiroveci:69

G0MUR0              	100.00%		L0PGX1              	100.00%
Bootstrap support for G0MUR0 as seed ortholog is 100%.
Bootstrap support for L0PGX1 as seed ortholog is 100%.

Group of orthologs #1158. Best score 69 bits
Score difference with first non-orthologous sequence - C.brenneri:69 P.jiroveci:69

G0N2C0              	100.00%		L0PEZ6              	100.00%
Bootstrap support for G0N2C0 as seed ortholog is 100%.
Bootstrap support for L0PEZ6 as seed ortholog is 100%.

Group of orthologs #1159. Best score 69 bits
Score difference with first non-orthologous sequence - C.brenneri:69 P.jiroveci:69

G0PN87              	100.00%		L0PCY1              	100.00%
Bootstrap support for G0PN87 as seed ortholog is 100%.
Bootstrap support for L0PCY1 as seed ortholog is 100%.

Group of orthologs #1160. Best score 68 bits
Score difference with first non-orthologous sequence - C.brenneri:68 P.jiroveci:68

G0MVH6              	100.00%		L0PFV2              	100.00%
Bootstrap support for G0MVH6 as seed ortholog is 100%.
Bootstrap support for L0PFV2 as seed ortholog is 100%.

Group of orthologs #1161. Best score 67 bits
Score difference with first non-orthologous sequence - C.brenneri:67 P.jiroveci:67

G0MXG1              	100.00%		L0PAP8              	100.00%
G0MGW7              	23.18%		
Bootstrap support for G0MXG1 as seed ortholog is 100%.
Bootstrap support for L0PAP8 as seed ortholog is 100%.

Group of orthologs #1162. Best score 67 bits
Score difference with first non-orthologous sequence - C.brenneri:67 P.jiroveci:67

G0MRG2              	100.00%		L0PDR4              	100.00%
Bootstrap support for G0MRG2 as seed ortholog is 100%.
Bootstrap support for L0PDR4 as seed ortholog is 100%.

Group of orthologs #1163. Best score 67 bits
Score difference with first non-orthologous sequence - C.brenneri:67 P.jiroveci:67

G0N5H4              	100.00%		L0PG18              	100.00%
Bootstrap support for G0N5H4 as seed ortholog is 100%.
Bootstrap support for L0PG18 as seed ortholog is 100%.

Group of orthologs #1164. Best score 67 bits
Score difference with first non-orthologous sequence - C.brenneri:67 P.jiroveci:67

G0NKM6              	100.00%		L0PG94              	100.00%
Bootstrap support for G0NKM6 as seed ortholog is 100%.
Bootstrap support for L0PG94 as seed ortholog is 100%.

Group of orthologs #1165. Best score 67 bits
Score difference with first non-orthologous sequence - C.brenneri:67 P.jiroveci:67

G0NPN7              	100.00%		L0PF95              	100.00%
Bootstrap support for G0NPN7 as seed ortholog is 100%.
Bootstrap support for L0PF95 as seed ortholog is 100%.

Group of orthologs #1166. Best score 67 bits
Score difference with first non-orthologous sequence - C.brenneri:67 P.jiroveci:67

G0P693              	100.00%		L0PAF5              	100.00%
Bootstrap support for G0P693 as seed ortholog is 100%.
Bootstrap support for L0PAF5 as seed ortholog is 100%.

Group of orthologs #1167. Best score 67 bits
Score difference with first non-orthologous sequence - C.brenneri:67 P.jiroveci:67

G0PAJ6              	100.00%		L0PFQ7              	100.00%
Bootstrap support for G0PAJ6 as seed ortholog is 100%.
Bootstrap support for L0PFQ7 as seed ortholog is 100%.

Group of orthologs #1168. Best score 67 bits
Score difference with first non-orthologous sequence - C.brenneri:67 P.jiroveci:67

G0PHL5              	100.00%		L0PCQ4              	100.00%
Bootstrap support for G0PHL5 as seed ortholog is 100%.
Bootstrap support for L0PCQ4 as seed ortholog is 100%.

Group of orthologs #1169. Best score 66 bits
Score difference with first non-orthologous sequence - C.brenneri:66 P.jiroveci:66

G0NPG1              	100.00%		L0PA43              	100.00%
G0NFP6              	99.54%		
G0M8M8              	29.03%		
Bootstrap support for G0NPG1 as seed ortholog is 100%.
Bootstrap support for L0PA43 as seed ortholog is 100%.

Group of orthologs #1170. Best score 66 bits
Score difference with first non-orthologous sequence - C.brenneri:66 P.jiroveci:66

G0MNV0              	100.00%		L0P8T2              	100.00%
                    	       		L0PA19              	100.00%
Bootstrap support for G0MNV0 as seed ortholog is 100%.
Bootstrap support for L0P8T2 as seed ortholog is 100%.
Bootstrap support for L0PA19 as seed ortholog is 100%.

Group of orthologs #1171. Best score 66 bits
Score difference with first non-orthologous sequence - C.brenneri:12 P.jiroveci:66

G0MNF3              	100.00%		L0PFK9              	100.00%
G0MNF7              	44.06%		
Bootstrap support for G0MNF3 as seed ortholog is 61%.
Alternative seed ortholog is G0MAP3 (12 bits away from this cluster)
Bootstrap support for L0PFK9 as seed ortholog is 100%.

Group of orthologs #1172. Best score 66 bits
Score difference with first non-orthologous sequence - C.brenneri:66 P.jiroveci:66

G0N7J7              	100.00%		L0PC69              	100.00%
G0PDC4              	5.51%		
Bootstrap support for G0N7J7 as seed ortholog is 100%.
Bootstrap support for L0PC69 as seed ortholog is 100%.

Group of orthologs #1173. Best score 66 bits
Score difference with first non-orthologous sequence - C.brenneri:66 P.jiroveci:66

G0MEX4              	100.00%		L0PF93              	100.00%
Bootstrap support for G0MEX4 as seed ortholog is 100%.
Bootstrap support for L0PF93 as seed ortholog is 100%.

Group of orthologs #1174. Best score 66 bits
Score difference with first non-orthologous sequence - C.brenneri:66 P.jiroveci:66

G0MVI2              	100.00%		L0PA11              	100.00%
Bootstrap support for G0MVI2 as seed ortholog is 100%.
Bootstrap support for L0PA11 as seed ortholog is 100%.

Group of orthologs #1175. Best score 65 bits
Score difference with first non-orthologous sequence - C.brenneri:65 P.jiroveci:65

G0N7D3              	100.00%		L0PBK6              	100.00%
G0PN00              	92.97%		
G0MN65              	70.13%		
G0NED7              	67.89%		
G0MN58              	55.75%		
G0MN70              	54.95%		
G0MN59              	54.31%		
G0MN60              	53.83%		
G0MN51              	53.67%		
G0MN68              	48.08%		
G0PNC4              	46.01%		
G0MN62              	44.57%		
G0NMU8              	29.23%		
G0MAN0              	27.48%		
G0MAN2              	23.16%		
G0MAM8              	23.00%		
G0MAM9              	15.18%		
G0NI82              	8.15%		
G0NPQ2              	7.19%		
G0NPQ4              	6.87%		
G0MYC8              	5.91%		
G0N8L1              	5.75%		
G0PJA9              	5.75%		
G0N8C3              	5.11%		
Bootstrap support for G0N7D3 as seed ortholog is 100%.
Bootstrap support for L0PBK6 as seed ortholog is 100%.

Group of orthologs #1176. Best score 65 bits
Score difference with first non-orthologous sequence - C.brenneri:65 P.jiroveci:65

G0N095              	100.00%		L0P7K1              	100.00%
Bootstrap support for G0N095 as seed ortholog is 100%.
Bootstrap support for L0P7K1 as seed ortholog is 100%.

Group of orthologs #1177. Best score 65 bits
Score difference with first non-orthologous sequence - C.brenneri:65 P.jiroveci:65

G0N4L6              	100.00%		L0PAY8              	100.00%
Bootstrap support for G0N4L6 as seed ortholog is 100%.
Bootstrap support for L0PAY8 as seed ortholog is 100%.

Group of orthologs #1178. Best score 65 bits
Score difference with first non-orthologous sequence - C.brenneri:65 P.jiroveci:65

G0NVC0              	100.00%		L0PFF1              	100.00%
Bootstrap support for G0NVC0 as seed ortholog is 100%.
Bootstrap support for L0PFF1 as seed ortholog is 100%.

Group of orthologs #1179. Best score 64 bits
Score difference with first non-orthologous sequence - C.brenneri:64 P.jiroveci:64

G0MH46              	100.00%		L0PBL1              	100.00%
G0MQZ8              	17.65%		
G0MR01              	16.44%		
G0MQZ7              	15.40%		
G0M6U2              	14.88%		
G0NNP4              	12.80%		
G0NSJ0              	12.63%		
G0NQV7              	5.36%		
Bootstrap support for G0MH46 as seed ortholog is 100%.
Bootstrap support for L0PBL1 as seed ortholog is 100%.

Group of orthologs #1180. Best score 64 bits
Score difference with first non-orthologous sequence - C.brenneri:64 P.jiroveci:64

G0NKH9              	100.00%		L0PDS8              	100.00%
G0P5B4              	100.00%		
Bootstrap support for G0NKH9 as seed ortholog is 100%.
Bootstrap support for G0P5B4 as seed ortholog is 100%.
Bootstrap support for L0PDS8 as seed ortholog is 100%.

Group of orthologs #1181. Best score 64 bits
Score difference with first non-orthologous sequence - C.brenneri:64 P.jiroveci:64

G0NUQ3              	100.00%		L0PGT2              	100.00%
G0PIP5              	86.53%		
Bootstrap support for G0NUQ3 as seed ortholog is 100%.
Bootstrap support for L0PGT2 as seed ortholog is 100%.

Group of orthologs #1182. Best score 64 bits
Score difference with first non-orthologous sequence - C.brenneri:64 P.jiroveci:64

G0MJM9              	100.00%		L0PB93              	100.00%
Bootstrap support for G0MJM9 as seed ortholog is 100%.
Bootstrap support for L0PB93 as seed ortholog is 100%.

Group of orthologs #1183. Best score 64 bits
Score difference with first non-orthologous sequence - C.brenneri:64 P.jiroveci:64

G0MQE7              	100.00%		L0PAE2              	100.00%
Bootstrap support for G0MQE7 as seed ortholog is 100%.
Bootstrap support for L0PAE2 as seed ortholog is 100%.

Group of orthologs #1184. Best score 64 bits
Score difference with first non-orthologous sequence - C.brenneri:64 P.jiroveci:64

G0NX61              	100.00%		L0PDW6              	100.00%
Bootstrap support for G0NX61 as seed ortholog is 100%.
Bootstrap support for L0PDW6 as seed ortholog is 100%.

Group of orthologs #1185. Best score 64 bits
Score difference with first non-orthologous sequence - C.brenneri:64 P.jiroveci:64

G0P5H8              	100.00%		L0PAG3              	100.00%
Bootstrap support for G0P5H8 as seed ortholog is 100%.
Bootstrap support for L0PAG3 as seed ortholog is 100%.

Group of orthologs #1186. Best score 63 bits
Score difference with first non-orthologous sequence - C.brenneri:63 P.jiroveci:10

G0P137              	100.00%		L0P9G4              	100.00%
G0NCU6              	93.52%		
Bootstrap support for G0P137 as seed ortholog is 100%.
Bootstrap support for L0P9G4 as seed ortholog is 45%.
Alternative seed ortholog is L0PF78 (10 bits away from this cluster)

Group of orthologs #1187. Best score 63 bits
Score difference with first non-orthologous sequence - C.brenneri:63 P.jiroveci:63

G0PEW7              	100.00%		L0PEA3              	100.00%
Bootstrap support for G0PEW7 as seed ortholog is 100%.
Bootstrap support for L0PEA3 as seed ortholog is 100%.

Group of orthologs #1188. Best score 63 bits
Score difference with first non-orthologous sequence - C.brenneri:63 P.jiroveci:63

G0PNW7              	100.00%		L0PB91              	100.00%
Bootstrap support for G0PNW7 as seed ortholog is 100%.
Bootstrap support for L0PB91 as seed ortholog is 100%.

Group of orthologs #1189. Best score 62 bits
Score difference with first non-orthologous sequence - C.brenneri:62 P.jiroveci:62

G0NPM3              	100.00%		L0PC19              	100.00%
G0PME8              	100.00%		
Bootstrap support for G0NPM3 as seed ortholog is 100%.
Bootstrap support for G0PME8 as seed ortholog is 100%.
Bootstrap support for L0PC19 as seed ortholog is 100%.

Group of orthologs #1190. Best score 62 bits
Score difference with first non-orthologous sequence - C.brenneri:62 P.jiroveci:62

G0NWQ8              	100.00%		L0PFF7              	100.00%
Bootstrap support for G0NWQ8 as seed ortholog is 100%.
Bootstrap support for L0PFF7 as seed ortholog is 100%.

Group of orthologs #1191. Best score 61 bits
Score difference with first non-orthologous sequence - C.brenneri:61 P.jiroveci:61

G0NS71              	100.00%		L0PCP2              	100.00%
Bootstrap support for G0NS71 as seed ortholog is 100%.
Bootstrap support for L0PCP2 as seed ortholog is 100%.

Group of orthologs #1192. Best score 60 bits
Score difference with first non-orthologous sequence - C.brenneri:60 P.jiroveci:60

G0NJ87              	100.00%		L0PEG8              	100.00%
G0NQZ1              	11.86%		
G0MA61              	9.75%		
Bootstrap support for G0NJ87 as seed ortholog is 100%.
Bootstrap support for L0PEG8 as seed ortholog is 100%.

Group of orthologs #1193. Best score 60 bits
Score difference with first non-orthologous sequence - C.brenneri:60 P.jiroveci:60

G0MNS9              	100.00%		L0PDR2              	100.00%
G0PFE6              	100.00%		
Bootstrap support for G0MNS9 as seed ortholog is 100%.
Bootstrap support for G0PFE6 as seed ortholog is 100%.
Bootstrap support for L0PDR2 as seed ortholog is 100%.

Group of orthologs #1194. Best score 60 bits
Score difference with first non-orthologous sequence - C.brenneri:60 P.jiroveci:60

G0MYJ6              	100.00%		L0PDQ8              	100.00%
G0P7D1              	42.62%		
Bootstrap support for G0MYJ6 as seed ortholog is 100%.
Bootstrap support for L0PDQ8 as seed ortholog is 100%.

Group of orthologs #1195. Best score 60 bits
Score difference with first non-orthologous sequence - C.brenneri:60 P.jiroveci:60

G0NLZ6              	100.00%		L0P9V4              	100.00%
Bootstrap support for G0NLZ6 as seed ortholog is 100%.
Bootstrap support for L0P9V4 as seed ortholog is 100%.

Group of orthologs #1196. Best score 59 bits
Score difference with first non-orthologous sequence - C.brenneri:59 P.jiroveci:59

G0P3V7              	100.00%		L0PBC9              	100.00%
G0NBR0              	96.11%		
G0NKY9              	87.10%		
Bootstrap support for G0P3V7 as seed ortholog is 100%.
Bootstrap support for L0PBC9 as seed ortholog is 100%.

Group of orthologs #1197. Best score 59 bits
Score difference with first non-orthologous sequence - C.brenneri:59 P.jiroveci:59

G0MFF2              	100.00%		L0P9X6              	100.00%
G0P744              	99.39%		
Bootstrap support for G0MFF2 as seed ortholog is 100%.
Bootstrap support for L0P9X6 as seed ortholog is 100%.

Group of orthologs #1198. Best score 59 bits
Score difference with first non-orthologous sequence - C.brenneri:59 P.jiroveci:59

G0MN26              	100.00%		L0PBR0              	100.00%
Bootstrap support for G0MN26 as seed ortholog is 100%.
Bootstrap support for L0PBR0 as seed ortholog is 100%.

Group of orthologs #1199. Best score 59 bits
Score difference with first non-orthologous sequence - C.brenneri:59 P.jiroveci:59

G0NSI7              	100.00%		L0PF50              	100.00%
Bootstrap support for G0NSI7 as seed ortholog is 100%.
Bootstrap support for L0PF50 as seed ortholog is 100%.

Group of orthologs #1200. Best score 59 bits
Score difference with first non-orthologous sequence - C.brenneri:59 P.jiroveci:59

G0PLS2              	100.00%		L0PCB7              	100.00%
Bootstrap support for G0PLS2 as seed ortholog is 100%.
Bootstrap support for L0PCB7 as seed ortholog is 100%.

Group of orthologs #1201. Best score 58 bits
Score difference with first non-orthologous sequence - C.brenneri:58 P.jiroveci:58

G0MNA5              	100.00%		L0PFN8              	100.00%
Bootstrap support for G0MNA5 as seed ortholog is 100%.
Bootstrap support for L0PFN8 as seed ortholog is 100%.

Group of orthologs #1202. Best score 58 bits
Score difference with first non-orthologous sequence - C.brenneri:58 P.jiroveci:58

G0N4V8              	100.00%		L0P705              	100.00%
Bootstrap support for G0N4V8 as seed ortholog is 100%.
Bootstrap support for L0P705 as seed ortholog is 100%.

Group of orthologs #1203. Best score 58 bits
Score difference with first non-orthologous sequence - C.brenneri:58 P.jiroveci:58

G0P6K2              	100.00%		L0PBS8              	100.00%
Bootstrap support for G0P6K2 as seed ortholog is 100%.
Bootstrap support for L0PBS8 as seed ortholog is 100%.

Group of orthologs #1204. Best score 58 bits
Score difference with first non-orthologous sequence - C.brenneri:58 P.jiroveci:58

G0P6I6              	100.00%		L0PD80              	100.00%
Bootstrap support for G0P6I6 as seed ortholog is 100%.
Bootstrap support for L0PD80 as seed ortholog is 100%.

Group of orthologs #1205. Best score 57 bits
Score difference with first non-orthologous sequence - C.brenneri:57 P.jiroveci:57

G0MZ87              	100.00%		L0PAT1              	100.00%
G0MZ91              	95.49%		
Bootstrap support for G0MZ87 as seed ortholog is 100%.
Bootstrap support for L0PAT1 as seed ortholog is 100%.

Group of orthologs #1206. Best score 57 bits
Score difference with first non-orthologous sequence - C.brenneri:57 P.jiroveci:57

G0PJU1              	100.00%		L0P9M2              	100.00%
G0NNE5              	88.41%		
Bootstrap support for G0PJU1 as seed ortholog is 100%.
Bootstrap support for L0P9M2 as seed ortholog is 100%.

Group of orthologs #1207. Best score 57 bits
Score difference with first non-orthologous sequence - C.brenneri:57 P.jiroveci:57

G0MKL8              	100.00%		L0PCJ4              	100.00%
Bootstrap support for G0MKL8 as seed ortholog is 100%.
Bootstrap support for L0PCJ4 as seed ortholog is 100%.

Group of orthologs #1208. Best score 57 bits
Score difference with first non-orthologous sequence - C.brenneri:57 P.jiroveci:57

G0MZX3              	100.00%		L0PGA3              	100.00%
Bootstrap support for G0MZX3 as seed ortholog is 100%.
Bootstrap support for L0PGA3 as seed ortholog is 100%.

Group of orthologs #1209. Best score 57 bits
Score difference with first non-orthologous sequence - C.brenneri:57 P.jiroveci:57

G0N921              	100.00%		L0PGS9              	100.00%
Bootstrap support for G0N921 as seed ortholog is 100%.
Bootstrap support for L0PGS9 as seed ortholog is 100%.

Group of orthologs #1210. Best score 57 bits
Score difference with first non-orthologous sequence - C.brenneri:57 P.jiroveci:57

G0PGS4              	100.00%		L0PAW5              	100.00%
Bootstrap support for G0PGS4 as seed ortholog is 100%.
Bootstrap support for L0PAW5 as seed ortholog is 100%.

Group of orthologs #1211. Best score 57 bits
Score difference with first non-orthologous sequence - C.brenneri:57 P.jiroveci:57

G0PJ92              	100.00%		L0P9A5              	100.00%
Bootstrap support for G0PJ92 as seed ortholog is 100%.
Bootstrap support for L0P9A5 as seed ortholog is 100%.

Group of orthologs #1212. Best score 57 bits
Score difference with first non-orthologous sequence - C.brenneri:57 P.jiroveci:57

G0PHQ3              	100.00%		L0PCB6              	100.00%
Bootstrap support for G0PHQ3 as seed ortholog is 100%.
Bootstrap support for L0PCB6 as seed ortholog is 100%.

Group of orthologs #1213. Best score 57 bits
Score difference with first non-orthologous sequence - C.brenneri:12 P.jiroveci:57

G0PMC0              	100.00%		L0PDY5              	100.00%
Bootstrap support for G0PMC0 as seed ortholog is 69%.
Alternative seed ortholog is G0P3Y5 (12 bits away from this cluster)
Bootstrap support for L0PDY5 as seed ortholog is 100%.

Group of orthologs #1214. Best score 56 bits
Score difference with first non-orthologous sequence - C.brenneri:56 P.jiroveci:56

G0NMP5              	100.00%		L0PEN8              	100.00%
G0NEA8              	36.53%		
G0P8Z5              	32.81%		
G0MY98              	25.27%		
G0NDU0              	24.31%		
G0MDW2              	19.40%		
G0PJ31              	12.57%		
Bootstrap support for G0NMP5 as seed ortholog is 100%.
Bootstrap support for L0PEN8 as seed ortholog is 100%.

Group of orthologs #1215. Best score 56 bits
Score difference with first non-orthologous sequence - C.brenneri:56 P.jiroveci:56

G0P6R7              	100.00%		L0P9V3              	100.00%
Bootstrap support for G0P6R7 as seed ortholog is 100%.
Bootstrap support for L0P9V3 as seed ortholog is 100%.

Group of orthologs #1216. Best score 56 bits
Score difference with first non-orthologous sequence - C.brenneri:56 P.jiroveci:56

G0PB28              	100.00%		L0P9H6              	100.00%
Bootstrap support for G0PB28 as seed ortholog is 100%.
Bootstrap support for L0P9H6 as seed ortholog is 100%.

Group of orthologs #1217. Best score 56 bits
Score difference with first non-orthologous sequence - C.brenneri:56 P.jiroveci:56

G0P6R4              	100.00%		L0PE66              	100.00%
Bootstrap support for G0P6R4 as seed ortholog is 100%.
Bootstrap support for L0PE66 as seed ortholog is 100%.

Group of orthologs #1218. Best score 56 bits
Score difference with first non-orthologous sequence - C.brenneri:56 P.jiroveci:56

G0PCL1              	100.00%		L0PF85              	100.00%
Bootstrap support for G0PCL1 as seed ortholog is 100%.
Bootstrap support for L0PF85 as seed ortholog is 100%.

Group of orthologs #1219. Best score 55 bits
Score difference with first non-orthologous sequence - C.brenneri:55 P.jiroveci:55

G0NLN5              	100.00%		L0P9X8              	100.00%
Bootstrap support for G0NLN5 as seed ortholog is 100%.
Bootstrap support for L0P9X8 as seed ortholog is 100%.

Group of orthologs #1220. Best score 55 bits
Score difference with first non-orthologous sequence - C.brenneri:10 P.jiroveci:55

G0NN85              	100.00%		L0P8Q3              	100.00%
Bootstrap support for G0NN85 as seed ortholog is 66%.
Alternative seed ortholog is G0MEK5 (10 bits away from this cluster)
Bootstrap support for L0P8Q3 as seed ortholog is 100%.

Group of orthologs #1221. Best score 55 bits
Score difference with first non-orthologous sequence - C.brenneri:55 P.jiroveci:55

G0P2E8              	100.00%		L0P937              	100.00%
Bootstrap support for G0P2E8 as seed ortholog is 100%.
Bootstrap support for L0P937 as seed ortholog is 100%.

Group of orthologs #1222. Best score 55 bits
Score difference with first non-orthologous sequence - C.brenneri:55 P.jiroveci:55

G0PDB9              	100.00%		L0P9R4              	100.00%
Bootstrap support for G0PDB9 as seed ortholog is 100%.
Bootstrap support for L0P9R4 as seed ortholog is 100%.

Group of orthologs #1223. Best score 55 bits
Score difference with first non-orthologous sequence - C.brenneri:55 P.jiroveci:55

G0PEZ3              	100.00%		L0PG35              	100.00%
Bootstrap support for G0PEZ3 as seed ortholog is 100%.
Bootstrap support for L0PG35 as seed ortholog is 100%.

Group of orthologs #1224. Best score 54 bits
Score difference with first non-orthologous sequence - C.brenneri:54 P.jiroveci:54

G0MQC5              	100.00%		L0PC31              	100.00%
G0M7Y4              	9.50%		L0PGG5              	100.00%
Bootstrap support for G0MQC5 as seed ortholog is 100%.
Bootstrap support for L0PC31 as seed ortholog is 100%.
Bootstrap support for L0PGG5 as seed ortholog is 100%.

Group of orthologs #1225. Best score 54 bits
Score difference with first non-orthologous sequence - C.brenneri:54 P.jiroveci:54

G0ML64              	100.00%		L0PCI6              	100.00%
Bootstrap support for G0ML64 as seed ortholog is 100%.
Bootstrap support for L0PCI6 as seed ortholog is 100%.

Group of orthologs #1226. Best score 54 bits
Score difference with first non-orthologous sequence - C.brenneri:54 P.jiroveci:54

G0NJT0              	100.00%		L0PB59              	100.00%
Bootstrap support for G0NJT0 as seed ortholog is 100%.
Bootstrap support for L0PB59 as seed ortholog is 100%.

Group of orthologs #1227. Best score 54 bits
Score difference with first non-orthologous sequence - C.brenneri:54 P.jiroveci:54

G0P0X5              	100.00%		L0PDB5              	100.00%
Bootstrap support for G0P0X5 as seed ortholog is 100%.
Bootstrap support for L0PDB5 as seed ortholog is 100%.

Group of orthologs #1228. Best score 53 bits
Score difference with first non-orthologous sequence - C.brenneri:53 P.jiroveci:53

G0MKR5              	100.00%		L0P9L4              	100.00%
Bootstrap support for G0MKR5 as seed ortholog is 100%.
Bootstrap support for L0P9L4 as seed ortholog is 100%.

Group of orthologs #1229. Best score 53 bits
Score difference with first non-orthologous sequence - C.brenneri:53 P.jiroveci:53

G0MKM6              	100.00%		L0PBA0              	100.00%
Bootstrap support for G0MKM6 as seed ortholog is 100%.
Bootstrap support for L0PBA0 as seed ortholog is 100%.

Group of orthologs #1230. Best score 53 bits
Score difference with first non-orthologous sequence - C.brenneri:53 P.jiroveci:53

G0N249              	100.00%		L0P813              	100.00%
Bootstrap support for G0N249 as seed ortholog is 100%.
Bootstrap support for L0P813 as seed ortholog is 100%.

Group of orthologs #1231. Best score 52 bits
Score difference with first non-orthologous sequence - C.brenneri:52 P.jiroveci:52

G0PGQ9              	100.00%		L0PG69              	100.00%
G0MRT5              	15.57%		
G0NR77              	14.93%		
G0PDC7              	13.00%		
G0MAW0              	7.98%		
G0M7Q5              	6.05%		
G0N427              	6.05%		
Bootstrap support for G0PGQ9 as seed ortholog is 100%.
Bootstrap support for L0PG69 as seed ortholog is 100%.

Group of orthologs #1232. Best score 52 bits
Score difference with first non-orthologous sequence - C.brenneri:52 P.jiroveci:52

G0MV75              	100.00%		L0PI42              	100.00%
G0PEF3              	93.01%		
Bootstrap support for G0MV75 as seed ortholog is 100%.
Bootstrap support for L0PI42 as seed ortholog is 100%.

Group of orthologs #1233. Best score 52 bits
Score difference with first non-orthologous sequence - C.brenneri:52 P.jiroveci:52

G0NU98              	100.00%		L0PBA7              	100.00%
Bootstrap support for G0NU98 as seed ortholog is 100%.
Bootstrap support for L0PBA7 as seed ortholog is 100%.

Group of orthologs #1234. Best score 51 bits
Score difference with first non-orthologous sequence - C.brenneri:51 P.jiroveci:51

G0MG50              	100.00%		L0PCC0              	100.00%
Bootstrap support for G0MG50 as seed ortholog is 100%.
Bootstrap support for L0PCC0 as seed ortholog is 100%.

Group of orthologs #1235. Best score 51 bits
Score difference with first non-orthologous sequence - C.brenneri:51 P.jiroveci:51

G0MVJ8              	100.00%		L0PAA2              	100.00%
Bootstrap support for G0MVJ8 as seed ortholog is 100%.
Bootstrap support for L0PAA2 as seed ortholog is 100%.

Group of orthologs #1236. Best score 51 bits
Score difference with first non-orthologous sequence - C.brenneri:51 P.jiroveci:51

G0NAT0              	100.00%		L0P9E6              	100.00%
Bootstrap support for G0NAT0 as seed ortholog is 100%.
Bootstrap support for L0P9E6 as seed ortholog is 100%.

Group of orthologs #1237. Best score 51 bits
Score difference with first non-orthologous sequence - C.brenneri:51 P.jiroveci:51

G0NGT3              	100.00%		L0PD92              	100.00%
Bootstrap support for G0NGT3 as seed ortholog is 100%.
Bootstrap support for L0PD92 as seed ortholog is 100%.

Group of orthologs #1238. Best score 50 bits
Score difference with first non-orthologous sequence - C.brenneri:50 P.jiroveci:50

G0NAN7              	100.00%		L0PCN6              	100.00%
G0PHG2              	100.00%		
Bootstrap support for G0NAN7 as seed ortholog is 100%.
Bootstrap support for G0PHG2 as seed ortholog is 100%.
Bootstrap support for L0PCN6 as seed ortholog is 100%.

Group of orthologs #1239. Best score 50 bits
Score difference with first non-orthologous sequence - C.brenneri:50 P.jiroveci:50

G0MKP7              	100.00%		L0PHU9              	100.00%
Bootstrap support for G0MKP7 as seed ortholog is 100%.
Bootstrap support for L0PHU9 as seed ortholog is 100%.

Group of orthologs #1240. Best score 50 bits
Score difference with first non-orthologous sequence - C.brenneri:50 P.jiroveci:50

G0P4V6              	100.00%		L0P8D1              	100.00%
Bootstrap support for G0P4V6 as seed ortholog is 100%.
Bootstrap support for L0P8D1 as seed ortholog is 100%.

Group of orthologs #1241. Best score 49 bits
Score difference with first non-orthologous sequence - C.brenneri:49 P.jiroveci:49

G0MVG1              	100.00%		L0P8R3              	100.00%
                    	       		L0PB56              	100.00%
Bootstrap support for G0MVG1 as seed ortholog is 100%.
Bootstrap support for L0P8R3 as seed ortholog is 100%.
Bootstrap support for L0PB56 as seed ortholog is 100%.

Group of orthologs #1242. Best score 49 bits
Score difference with first non-orthologous sequence - C.brenneri:49 P.jiroveci:49

G0PLE6              	100.00%		L0PC28              	100.00%
G0P5M4              	97.54%		
Bootstrap support for G0PLE6 as seed ortholog is 100%.
Bootstrap support for L0PC28 as seed ortholog is 100%.

Group of orthologs #1243. Best score 49 bits
Score difference with first non-orthologous sequence - C.brenneri:49 P.jiroveci:49

G0MLQ0              	100.00%		L0PBB5              	100.00%
Bootstrap support for G0MLQ0 as seed ortholog is 100%.
Bootstrap support for L0PBB5 as seed ortholog is 100%.

Group of orthologs #1244. Best score 49 bits
Score difference with first non-orthologous sequence - C.brenneri:49 P.jiroveci:49

G0NUZ3              	100.00%		L0PDZ0              	100.00%
Bootstrap support for G0NUZ3 as seed ortholog is 100%.
Bootstrap support for L0PDZ0 as seed ortholog is 100%.

Group of orthologs #1245. Best score 49 bits
Score difference with first non-orthologous sequence - C.brenneri:49 P.jiroveci:49

G0P434              	100.00%		L0PEH3              	100.00%
Bootstrap support for G0P434 as seed ortholog is 100%.
Bootstrap support for L0PEH3 as seed ortholog is 100%.

Group of orthologs #1246. Best score 49 bits
Score difference with first non-orthologous sequence - C.brenneri:49 P.jiroveci:49

G0P4X2              	100.00%		L0PE69              	100.00%
Bootstrap support for G0P4X2 as seed ortholog is 100%.
Bootstrap support for L0PE69 as seed ortholog is 100%.

Group of orthologs #1247. Best score 48 bits
Score difference with first non-orthologous sequence - C.brenneri:48 P.jiroveci:48

G0N2K2              	100.00%		L0PB26              	100.00%
G0N2K3              	42.67%		
G0N2A5              	37.07%		
G0N2A2              	24.00%		
Bootstrap support for G0N2K2 as seed ortholog is 100%.
Bootstrap support for L0PB26 as seed ortholog is 100%.

Group of orthologs #1248. Best score 48 bits
Score difference with first non-orthologous sequence - C.brenneri:48 P.jiroveci:48

G0MDP4              	100.00%		L0PFL2              	100.00%
Bootstrap support for G0MDP4 as seed ortholog is 100%.
Bootstrap support for L0PFL2 as seed ortholog is 100%.

Group of orthologs #1249. Best score 48 bits
Score difference with first non-orthologous sequence - C.brenneri:48 P.jiroveci:48

G0P5M2              	100.00%		L0PDC5              	100.00%
Bootstrap support for G0P5M2 as seed ortholog is 100%.
Bootstrap support for L0PDC5 as seed ortholog is 100%.

Group of orthologs #1250. Best score 47 bits
Score difference with first non-orthologous sequence - C.brenneri:47 P.jiroveci:47

G0NIG2              	100.00%		L0PD75              	100.00%
G0NK15              	34.06%		
G0N929              	31.66%		
G0NCB6              	16.74%		
Bootstrap support for G0NIG2 as seed ortholog is 100%.
Bootstrap support for L0PD75 as seed ortholog is 100%.

Group of orthologs #1251. Best score 47 bits
Score difference with first non-orthologous sequence - C.brenneri:47 P.jiroveci:47

G0MDL9              	100.00%		L0PEP6              	100.00%
G0MER7              	22.11%		
Bootstrap support for G0MDL9 as seed ortholog is 100%.
Bootstrap support for L0PEP6 as seed ortholog is 100%.

Group of orthologs #1252. Best score 47 bits
Score difference with first non-orthologous sequence - C.brenneri:47 P.jiroveci:47

G0NXY7              	100.00%		L0P927              	100.00%
G0PH50              	100.00%		
Bootstrap support for G0NXY7 as seed ortholog is 100%.
Bootstrap support for G0PH50 as seed ortholog is 100%.
Bootstrap support for L0P927 as seed ortholog is 100%.

Group of orthologs #1253. Best score 47 bits
Score difference with first non-orthologous sequence - C.brenneri:47 P.jiroveci:47

G0M865              	100.00%		L0PHJ4              	100.00%
Bootstrap support for G0M865 as seed ortholog is 100%.
Bootstrap support for L0PHJ4 as seed ortholog is 100%.

Group of orthologs #1254. Best score 46 bits
Score difference with first non-orthologous sequence - C.brenneri:46 P.jiroveci:46

G0MZT6              	100.00%		L0PAD5              	100.00%
Bootstrap support for G0MZT6 as seed ortholog is 100%.
Bootstrap support for L0PAD5 as seed ortholog is 100%.

Group of orthologs #1255. Best score 46 bits
Score difference with first non-orthologous sequence - C.brenneri:46 P.jiroveci:46

G0NWM8              	100.00%		L0P737              	100.00%
Bootstrap support for G0NWM8 as seed ortholog is 100%.
Bootstrap support for L0P737 as seed ortholog is 100%.

Group of orthologs #1256. Best score 45 bits
Score difference with first non-orthologous sequence - C.brenneri:45 P.jiroveci:45

G0NLJ0              	100.00%		L0PBR5              	100.00%
G0NPW9              	95.10%		
Bootstrap support for G0NLJ0 as seed ortholog is 100%.
Bootstrap support for L0PBR5 as seed ortholog is 100%.

Group of orthologs #1257. Best score 45 bits
Score difference with first non-orthologous sequence - C.brenneri:45 P.jiroveci:45

G0NSF4              	100.00%		L0P9J5              	100.00%
G0NSI9              	99.40%		
Bootstrap support for G0NSF4 as seed ortholog is 100%.
Bootstrap support for L0P9J5 as seed ortholog is 100%.

Group of orthologs #1258. Best score 45 bits
Score difference with first non-orthologous sequence - C.brenneri:45 P.jiroveci:45

G0N9B7              	100.00%		L0P9A1              	100.00%
Bootstrap support for G0N9B7 as seed ortholog is 100%.
Bootstrap support for L0P9A1 as seed ortholog is 100%.

Group of orthologs #1259. Best score 45 bits
Score difference with first non-orthologous sequence - C.brenneri:45 P.jiroveci:45

G0N924              	100.00%		L0PFE5              	100.00%
Bootstrap support for G0N924 as seed ortholog is 100%.
Bootstrap support for L0PFE5 as seed ortholog is 100%.

Group of orthologs #1260. Best score 44 bits
Score difference with first non-orthologous sequence - C.brenneri:44 P.jiroveci:44

G0P1U7              	100.00%		L0P7U7              	100.00%
Bootstrap support for G0P1U7 as seed ortholog is 100%.
Bootstrap support for L0P7U7 as seed ortholog is 100%.

Group of orthologs #1261. Best score 43 bits
Score difference with first non-orthologous sequence - C.brenneri:43 P.jiroveci:43

G0MLR2              	100.00%		L0PAV7              	100.00%
                    	       		L0PBJ9              	100.00%
Bootstrap support for G0MLR2 as seed ortholog is 100%.
Bootstrap support for L0PAV7 as seed ortholog is 100%.
Bootstrap support for L0PBJ9 as seed ortholog is 100%.

Group of orthologs #1262. Best score 43 bits
Score difference with first non-orthologous sequence - C.brenneri:43 P.jiroveci:43

G0ML67              	100.00%		L0P881              	100.00%
Bootstrap support for G0ML67 as seed ortholog is 100%.
Bootstrap support for L0P881 as seed ortholog is 100%.

Group of orthologs #1263. Best score 42 bits
Score difference with first non-orthologous sequence - C.brenneri:42 P.jiroveci:42

G0NYM2              	100.00%		L0PCT2              	100.00%
G0PBI5              	100.00%		
G0MDX1              	6.88%		
Bootstrap support for G0NYM2 as seed ortholog is 100%.
Bootstrap support for G0PBI5 as seed ortholog is 100%.
Bootstrap support for L0PCT2 as seed ortholog is 100%.

Group of orthologs #1264. Best score 42 bits
Score difference with first non-orthologous sequence - C.brenneri:42 P.jiroveci:42

G0P2E9              	100.00%		L0PAI3              	100.00%
Bootstrap support for G0P2E9 as seed ortholog is 100%.
Bootstrap support for L0PAI3 as seed ortholog is 100%.

Group of orthologs #1265. Best score 40 bits
Score difference with first non-orthologous sequence - C.brenneri:40 P.jiroveci:40

G0ME57              	100.00%		L0PF45              	100.00%
Bootstrap support for G0ME57 as seed ortholog is 100%.
Bootstrap support for L0PF45 as seed ortholog is 100%.

Group of orthologs #1266. Best score 40 bits
Score difference with first non-orthologous sequence - C.brenneri:40 P.jiroveci:40

G0P6W7              	100.00%		L0P9K8              	100.00%
Bootstrap support for G0P6W7 as seed ortholog is 100%.
Bootstrap support for L0P9K8 as seed ortholog is 100%.