###################################
244 groups of orthologs
343 in-paralogs from C.aurantiacus
288 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 753 bits
Score difference with first non-orthologous sequence - C.aurantiacus:753 P.jiroveci:753

A9WCJ8              	100.00%		L0P7C3              	100.00%
Bootstrap support for A9WCJ8 as seed ortholog is 100%.
Bootstrap support for L0P7C3 as seed ortholog is 100%.

Group of orthologs #2. Best score 713 bits
Score difference with first non-orthologous sequence - C.aurantiacus:713 P.jiroveci:713

A9WHJ8              	100.00%		L0P9C7              	100.00%
A9WIG6              	11.37%		
A9WHY9              	7.62%		
Bootstrap support for A9WHJ8 as seed ortholog is 100%.
Bootstrap support for L0P9C7 as seed ortholog is 100%.

Group of orthologs #3. Best score 713 bits
Score difference with first non-orthologous sequence - C.aurantiacus:659 P.jiroveci:155

A9WFV9              	100.00%		L0PFS2              	100.00%
Bootstrap support for A9WFV9 as seed ortholog is 100%.
Bootstrap support for L0PFS2 as seed ortholog is 99%.

Group of orthologs #4. Best score 673 bits
Score difference with first non-orthologous sequence - C.aurantiacus:673 P.jiroveci:673

A9WH07              	100.00%		L0PEQ8              	100.00%
Bootstrap support for A9WH07 as seed ortholog is 100%.
Bootstrap support for L0PEQ8 as seed ortholog is 100%.

Group of orthologs #5. Best score 651 bits
Score difference with first non-orthologous sequence - C.aurantiacus:651 P.jiroveci:161

A9WJF0              	100.00%		L0PDB3              	100.00%
Bootstrap support for A9WJF0 as seed ortholog is 100%.
Bootstrap support for L0PDB3 as seed ortholog is 99%.

Group of orthologs #6. Best score 632 bits
Score difference with first non-orthologous sequence - C.aurantiacus:632 P.jiroveci:632

A9WBV3              	100.00%		L0PGR4              	100.00%
                    	       		L0PFQ2              	93.40%
Bootstrap support for A9WBV3 as seed ortholog is 100%.
Bootstrap support for L0PGR4 as seed ortholog is 100%.

Group of orthologs #7. Best score 544 bits
Score difference with first non-orthologous sequence - C.aurantiacus:544 P.jiroveci:544

A9WGS6              	100.00%		L0P833              	100.00%
                    	       		L0P765              	13.79%
Bootstrap support for A9WGS6 as seed ortholog is 100%.
Bootstrap support for L0P833 as seed ortholog is 100%.

Group of orthologs #8. Best score 538 bits
Score difference with first non-orthologous sequence - C.aurantiacus:538 P.jiroveci:538

A9WD77              	100.00%		L0PF66              	100.00%
Bootstrap support for A9WD77 as seed ortholog is 100%.
Bootstrap support for L0PF66 as seed ortholog is 100%.

Group of orthologs #9. Best score 519 bits
Score difference with first non-orthologous sequence - C.aurantiacus:153 P.jiroveci:207

A9WH62              	100.00%		L0PBP8              	100.00%
Bootstrap support for A9WH62 as seed ortholog is 99%.
Bootstrap support for L0PBP8 as seed ortholog is 99%.

Group of orthologs #10. Best score 517 bits
Score difference with first non-orthologous sequence - C.aurantiacus:517 P.jiroveci:426

A9WJN7              	100.00%		L0PDM6              	100.00%
A9WFA3              	44.05%		
Bootstrap support for A9WJN7 as seed ortholog is 100%.
Bootstrap support for L0PDM6 as seed ortholog is 100%.

Group of orthologs #11. Best score 505 bits
Score difference with first non-orthologous sequence - C.aurantiacus:505 P.jiroveci:505

A9WCR2              	100.00%		L0PDQ4              	100.00%
Bootstrap support for A9WCR2 as seed ortholog is 100%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #12. Best score 493 bits
Score difference with first non-orthologous sequence - C.aurantiacus:493 P.jiroveci:333

A9WFP3              	100.00%		L0P9G2              	100.00%
Bootstrap support for A9WFP3 as seed ortholog is 100%.
Bootstrap support for L0P9G2 as seed ortholog is 100%.

Group of orthologs #13. Best score 492 bits
Score difference with first non-orthologous sequence - C.aurantiacus:254 P.jiroveci:492

A9WJ21              	100.00%		L0PET9              	100.00%
Bootstrap support for A9WJ21 as seed ortholog is 100%.
Bootstrap support for L0PET9 as seed ortholog is 100%.

Group of orthologs #14. Best score 474 bits
Score difference with first non-orthologous sequence - C.aurantiacus:474 P.jiroveci:474

A9WHT7              	100.00%		L0PAQ1              	100.00%
Bootstrap support for A9WHT7 as seed ortholog is 100%.
Bootstrap support for L0PAQ1 as seed ortholog is 100%.

Group of orthologs #15. Best score 453 bits
Score difference with first non-orthologous sequence - C.aurantiacus:349 P.jiroveci:453

A9WGU4              	100.00%		L0PBG8              	100.00%
Bootstrap support for A9WGU4 as seed ortholog is 100%.
Bootstrap support for L0PBG8 as seed ortholog is 100%.

Group of orthologs #16. Best score 436 bits
Score difference with first non-orthologous sequence - C.aurantiacus:436 P.jiroveci:436

A9WJ75              	100.00%		L0PC65              	100.00%
Bootstrap support for A9WJ75 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #17. Best score 430 bits
Score difference with first non-orthologous sequence - C.aurantiacus:278 P.jiroveci:23

A9WJZ0              	100.00%		L0PCW9              	100.00%
Bootstrap support for A9WJZ0 as seed ortholog is 100%.
Bootstrap support for L0PCW9 as seed ortholog is 59%.
Alternative seed ortholog is L0PAF4 (23 bits away from this cluster)

Group of orthologs #18. Best score 429 bits
Score difference with first non-orthologous sequence - C.aurantiacus:429 P.jiroveci:429

A9WKL7              	100.00%		L0PCP1              	100.00%
Bootstrap support for A9WKL7 as seed ortholog is 100%.
Bootstrap support for L0PCP1 as seed ortholog is 100%.

Group of orthologs #19. Best score 427 bits
Score difference with first non-orthologous sequence - C.aurantiacus:427 P.jiroveci:209

A9WJJ3              	100.00%		L0PBQ6              	100.00%
Bootstrap support for A9WJJ3 as seed ortholog is 100%.
Bootstrap support for L0PBQ6 as seed ortholog is 98%.

Group of orthologs #20. Best score 424 bits
Score difference with first non-orthologous sequence - C.aurantiacus:424 P.jiroveci:424

A9WGB5              	100.00%		L0PEK9              	100.00%
Bootstrap support for A9WGB5 as seed ortholog is 100%.
Bootstrap support for L0PEK9 as seed ortholog is 100%.

Group of orthologs #21. Best score 406 bits
Score difference with first non-orthologous sequence - C.aurantiacus:171 P.jiroveci:245

A9WER4              	100.00%		L0PGH3              	100.00%
Bootstrap support for A9WER4 as seed ortholog is 99%.
Bootstrap support for L0PGH3 as seed ortholog is 99%.

Group of orthologs #22. Best score 405 bits
Score difference with first non-orthologous sequence - C.aurantiacus:405 P.jiroveci:405

A9WBL0              	100.00%		L0PA93              	100.00%
Bootstrap support for A9WBL0 as seed ortholog is 100%.
Bootstrap support for L0PA93 as seed ortholog is 100%.

Group of orthologs #23. Best score 398 bits
Score difference with first non-orthologous sequence - C.aurantiacus:398 P.jiroveci:398

A9WGQ3              	100.00%		L0PBR9              	100.00%
Bootstrap support for A9WGQ3 as seed ortholog is 100%.
Bootstrap support for L0PBR9 as seed ortholog is 100%.

Group of orthologs #24. Best score 382 bits
Score difference with first non-orthologous sequence - C.aurantiacus:245 P.jiroveci:382

A9WE57              	100.00%		L0PAS8              	100.00%
Bootstrap support for A9WE57 as seed ortholog is 100%.
Bootstrap support for L0PAS8 as seed ortholog is 100%.

Group of orthologs #25. Best score 378 bits
Score difference with first non-orthologous sequence - C.aurantiacus:378 P.jiroveci:237

A9WGS4              	100.00%		L0PDC9              	100.00%
Bootstrap support for A9WGS4 as seed ortholog is 100%.
Bootstrap support for L0PDC9 as seed ortholog is 100%.

Group of orthologs #26. Best score 371 bits
Score difference with first non-orthologous sequence - C.aurantiacus:371 P.jiroveci:244

A9WGJ7              	100.00%		L0P8W4              	100.00%
Bootstrap support for A9WGJ7 as seed ortholog is 100%.
Bootstrap support for L0P8W4 as seed ortholog is 99%.

Group of orthologs #27. Best score 368 bits
Score difference with first non-orthologous sequence - C.aurantiacus:42 P.jiroveci:368

A9WFB4              	100.00%		L0PB96              	100.00%
Bootstrap support for A9WFB4 as seed ortholog is 87%.
Bootstrap support for L0PB96 as seed ortholog is 100%.

Group of orthologs #28. Best score 361 bits
Score difference with first non-orthologous sequence - C.aurantiacus:361 P.jiroveci:274

A9WK84              	100.00%		L0PBN1              	100.00%
Bootstrap support for A9WK84 as seed ortholog is 100%.
Bootstrap support for L0PBN1 as seed ortholog is 100%.

Group of orthologs #29. Best score 352 bits
Score difference with first non-orthologous sequence - C.aurantiacus:194 P.jiroveci:352

A9WEM2              	100.00%		L0P7Y5              	100.00%
Bootstrap support for A9WEM2 as seed ortholog is 100%.
Bootstrap support for L0P7Y5 as seed ortholog is 100%.

Group of orthologs #30. Best score 351 bits
Score difference with first non-orthologous sequence - C.aurantiacus:351 P.jiroveci:351

A9WJD3              	100.00%		L0PAW9              	100.00%
                    	       		L0PBZ0              	86.17%
Bootstrap support for A9WJD3 as seed ortholog is 100%.
Bootstrap support for L0PAW9 as seed ortholog is 100%.

Group of orthologs #31. Best score 349 bits
Score difference with first non-orthologous sequence - C.aurantiacus:349 P.jiroveci:349

A9WFB6              	100.00%		L0P971              	100.00%
Bootstrap support for A9WFB6 as seed ortholog is 100%.
Bootstrap support for L0P971 as seed ortholog is 100%.

Group of orthologs #32. Best score 347 bits
Score difference with first non-orthologous sequence - C.aurantiacus:347 P.jiroveci:347

A9WDR5              	100.00%		L0PDI1              	100.00%
Bootstrap support for A9WDR5 as seed ortholog is 100%.
Bootstrap support for L0PDI1 as seed ortholog is 100%.

Group of orthologs #33. Best score 342 bits
Score difference with first non-orthologous sequence - C.aurantiacus:342 P.jiroveci:116

A9WK04              	100.00%		L0PFG7              	100.00%
Bootstrap support for A9WK04 as seed ortholog is 100%.
Bootstrap support for L0PFG7 as seed ortholog is 99%.

Group of orthologs #34. Best score 338 bits
Score difference with first non-orthologous sequence - C.aurantiacus:338 P.jiroveci:338

A9WI58              	100.00%		L0PCX1              	100.00%
Bootstrap support for A9WI58 as seed ortholog is 100%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #35. Best score 329 bits
Score difference with first non-orthologous sequence - C.aurantiacus:329 P.jiroveci:329

A9WEU7              	100.00%		L0P7N3              	100.00%
Bootstrap support for A9WEU7 as seed ortholog is 100%.
Bootstrap support for L0P7N3 as seed ortholog is 100%.

Group of orthologs #36. Best score 329 bits
Score difference with first non-orthologous sequence - C.aurantiacus:329 P.jiroveci:329

A9WGQ4              	100.00%		L0PDJ1              	100.00%
Bootstrap support for A9WGQ4 as seed ortholog is 100%.
Bootstrap support for L0PDJ1 as seed ortholog is 100%.

Group of orthologs #37. Best score 326 bits
Score difference with first non-orthologous sequence - C.aurantiacus:326 P.jiroveci:326

A9WDY7              	100.00%		L0PEX5              	100.00%
A9WJ70              	17.82%		
Bootstrap support for A9WDY7 as seed ortholog is 100%.
Bootstrap support for L0PEX5 as seed ortholog is 100%.

Group of orthologs #38. Best score 324 bits
Score difference with first non-orthologous sequence - C.aurantiacus:153 P.jiroveci:324

A9WEW0              	100.00%		L0PE57              	100.00%
Bootstrap support for A9WEW0 as seed ortholog is 99%.
Bootstrap support for L0PE57 as seed ortholog is 100%.

Group of orthologs #39. Best score 322 bits
Score difference with first non-orthologous sequence - C.aurantiacus:322 P.jiroveci:322

A9WDZ7              	100.00%		L0PFY1              	100.00%
Bootstrap support for A9WDZ7 as seed ortholog is 100%.
Bootstrap support for L0PFY1 as seed ortholog is 100%.

Group of orthologs #40. Best score 316 bits
Score difference with first non-orthologous sequence - C.aurantiacus:88 P.jiroveci:316

A9WAX8              	100.00%		L0PA09              	100.00%
Bootstrap support for A9WAX8 as seed ortholog is 99%.
Bootstrap support for L0PA09 as seed ortholog is 100%.

Group of orthologs #41. Best score 314 bits
Score difference with first non-orthologous sequence - C.aurantiacus:314 P.jiroveci:314

A9WH11              	100.00%		L0PB90              	100.00%
                    	       		L0PB43              	13.99%
Bootstrap support for A9WH11 as seed ortholog is 100%.
Bootstrap support for L0PB90 as seed ortholog is 100%.

Group of orthologs #42. Best score 302 bits
Score difference with first non-orthologous sequence - C.aurantiacus:302 P.jiroveci:302

A9WI34              	100.00%		L0PHL5              	100.00%
Bootstrap support for A9WI34 as seed ortholog is 100%.
Bootstrap support for L0PHL5 as seed ortholog is 100%.

Group of orthologs #43. Best score 300 bits
Score difference with first non-orthologous sequence - C.aurantiacus:300 P.jiroveci:300

A9WFB7              	100.00%		L0P7K0              	100.00%
Bootstrap support for A9WFB7 as seed ortholog is 100%.
Bootstrap support for L0P7K0 as seed ortholog is 100%.

Group of orthologs #44. Best score 295 bits
Score difference with first non-orthologous sequence - C.aurantiacus:295 P.jiroveci:295

A9WAB2              	100.00%		L0PES7              	100.00%
Bootstrap support for A9WAB2 as seed ortholog is 100%.
Bootstrap support for L0PES7 as seed ortholog is 100%.

Group of orthologs #45. Best score 288 bits
Score difference with first non-orthologous sequence - C.aurantiacus:288 P.jiroveci:288

A9WE89              	100.00%		L0PG48              	100.00%
Bootstrap support for A9WE89 as seed ortholog is 100%.
Bootstrap support for L0PG48 as seed ortholog is 100%.

Group of orthologs #46. Best score 287 bits
Score difference with first non-orthologous sequence - C.aurantiacus:139 P.jiroveci:287

A9WBV2              	100.00%		L0PC17              	100.00%
                    	       		L0PD22              	55.65%
Bootstrap support for A9WBV2 as seed ortholog is 99%.
Bootstrap support for L0PC17 as seed ortholog is 100%.

Group of orthologs #47. Best score 287 bits
Score difference with first non-orthologous sequence - C.aurantiacus:287 P.jiroveci:287

A9WFK3              	100.00%		L0PGA8              	100.00%
Bootstrap support for A9WFK3 as seed ortholog is 100%.
Bootstrap support for L0PGA8 as seed ortholog is 100%.

Group of orthologs #48. Best score 286 bits
Score difference with first non-orthologous sequence - C.aurantiacus:125 P.jiroveci:286

A9WF95              	100.00%		L0PHB9              	100.00%
A9WCD5              	16.52%		L0P9A8              	87.50%
A9WCD6              	14.37%		
A9WEZ0              	10.52%		
A9WCJ9              	6.67%		
A9WEY9              	5.20%		
Bootstrap support for A9WF95 as seed ortholog is 99%.
Bootstrap support for L0PHB9 as seed ortholog is 100%.

Group of orthologs #49. Best score 285 bits
Score difference with first non-orthologous sequence - C.aurantiacus:285 P.jiroveci:76

A9WFZ9              	100.00%		L0PIP5              	100.00%
Bootstrap support for A9WFZ9 as seed ortholog is 100%.
Bootstrap support for L0PIP5 as seed ortholog is 89%.

Group of orthologs #50. Best score 284 bits
Score difference with first non-orthologous sequence - C.aurantiacus:66 P.jiroveci:284

A9WE29              	100.00%		L0PDT0              	100.00%
A9WB61              	8.26%		
A9W9S6              	8.26%		
Bootstrap support for A9WE29 as seed ortholog is 96%.
Bootstrap support for L0PDT0 as seed ortholog is 100%.

Group of orthologs #51. Best score 282 bits
Score difference with first non-orthologous sequence - C.aurantiacus:184 P.jiroveci:282

A9WAB8              	100.00%		L0P6Y2              	100.00%
Bootstrap support for A9WAB8 as seed ortholog is 100%.
Bootstrap support for L0P6Y2 as seed ortholog is 100%.

Group of orthologs #52. Best score 281 bits
Score difference with first non-orthologous sequence - C.aurantiacus:281 P.jiroveci:281

A9WAX6              	100.00%		L0P8T4              	100.00%
Bootstrap support for A9WAX6 as seed ortholog is 100%.
Bootstrap support for L0P8T4 as seed ortholog is 100%.

Group of orthologs #53. Best score 275 bits
Score difference with first non-orthologous sequence - C.aurantiacus:275 P.jiroveci:275

A9WDV3              	100.00%		L0PG19              	100.00%
Bootstrap support for A9WDV3 as seed ortholog is 100%.
Bootstrap support for L0PG19 as seed ortholog is 100%.

Group of orthologs #54. Best score 273 bits
Score difference with first non-orthologous sequence - C.aurantiacus:47 P.jiroveci:151

A9WFQ6              	100.00%		L0P6V9              	100.00%
                    	       		L0PBF0              	5.10%
Bootstrap support for A9WFQ6 as seed ortholog is 93%.
Bootstrap support for L0P6V9 as seed ortholog is 100%.

Group of orthologs #55. Best score 271 bits
Score difference with first non-orthologous sequence - C.aurantiacus:271 P.jiroveci:17

A9WHF7              	100.00%		L0P7V6              	100.00%
                    	       		L0PC64              	28.06%
Bootstrap support for A9WHF7 as seed ortholog is 100%.
Bootstrap support for L0P7V6 as seed ortholog is 31%.
Alternative seed ortholog is L0PCI7 (17 bits away from this cluster)

Group of orthologs #56. Best score 264 bits
Score difference with first non-orthologous sequence - C.aurantiacus:264 P.jiroveci:264

A9WHK0              	100.00%		L0PEE3              	100.00%
Bootstrap support for A9WHK0 as seed ortholog is 100%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #57. Best score 257 bits
Score difference with first non-orthologous sequence - C.aurantiacus:257 P.jiroveci:257

A9WGJ1              	100.00%		L0PDU5              	100.00%
Bootstrap support for A9WGJ1 as seed ortholog is 100%.
Bootstrap support for L0PDU5 as seed ortholog is 100%.

Group of orthologs #58. Best score 253 bits
Score difference with first non-orthologous sequence - C.aurantiacus:253 P.jiroveci:253

A9W9Z4              	100.00%		L0PDZ2              	100.00%
Bootstrap support for A9W9Z4 as seed ortholog is 100%.
Bootstrap support for L0PDZ2 as seed ortholog is 100%.

Group of orthologs #59. Best score 250 bits
Score difference with first non-orthologous sequence - C.aurantiacus:250 P.jiroveci:250

A9WEK8              	100.00%		L0PBN0              	100.00%
Bootstrap support for A9WEK8 as seed ortholog is 100%.
Bootstrap support for L0PBN0 as seed ortholog is 100%.

Group of orthologs #60. Best score 250 bits
Score difference with first non-orthologous sequence - C.aurantiacus:250 P.jiroveci:250

A9WJX4              	100.00%		L0PB60              	100.00%
Bootstrap support for A9WJX4 as seed ortholog is 100%.
Bootstrap support for L0PB60 as seed ortholog is 100%.

Group of orthologs #61. Best score 248 bits
Score difference with first non-orthologous sequence - C.aurantiacus:28 P.jiroveci:248

A9WE30              	100.00%		L0PCP3              	100.00%
A9WCB7              	9.43%		
Bootstrap support for A9WE30 as seed ortholog is 88%.
Bootstrap support for L0PCP3 as seed ortholog is 100%.

Group of orthologs #62. Best score 247 bits
Score difference with first non-orthologous sequence - C.aurantiacus:247 P.jiroveci:247

A9WAX3              	100.00%		L0PDV1              	100.00%
Bootstrap support for A9WAX3 as seed ortholog is 100%.
Bootstrap support for L0PDV1 as seed ortholog is 100%.

Group of orthologs #63. Best score 247 bits
Score difference with first non-orthologous sequence - C.aurantiacus:247 P.jiroveci:181

A9WEJ9              	100.00%		L0PFY2              	100.00%
Bootstrap support for A9WEJ9 as seed ortholog is 100%.
Bootstrap support for L0PFY2 as seed ortholog is 99%.

Group of orthologs #64. Best score 245 bits
Score difference with first non-orthologous sequence - C.aurantiacus:92 P.jiroveci:245

A9WBV8              	100.00%		L0P7Z6              	100.00%
Bootstrap support for A9WBV8 as seed ortholog is 98%.
Bootstrap support for L0P7Z6 as seed ortholog is 100%.

Group of orthologs #65. Best score 242 bits
Score difference with first non-orthologous sequence - C.aurantiacus:242 P.jiroveci:242

A9WEK2              	100.00%		L0PFN9              	100.00%
                    	       		L0PEF0              	29.42%
Bootstrap support for A9WEK2 as seed ortholog is 100%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #66. Best score 235 bits
Score difference with first non-orthologous sequence - C.aurantiacus:235 P.jiroveci:235

A9W9Z9              	100.00%		L0PF83              	100.00%
Bootstrap support for A9W9Z9 as seed ortholog is 100%.
Bootstrap support for L0PF83 as seed ortholog is 100%.

Group of orthologs #67. Best score 231 bits
Score difference with first non-orthologous sequence - C.aurantiacus:231 P.jiroveci:231

A9WIS8              	100.00%		L0PD99              	100.00%
Bootstrap support for A9WIS8 as seed ortholog is 100%.
Bootstrap support for L0PD99 as seed ortholog is 100%.

Group of orthologs #68. Best score 230 bits
Score difference with first non-orthologous sequence - C.aurantiacus:230 P.jiroveci:230

A9W9P7              	100.00%		L0P9P8              	100.00%
A9WD84              	17.32%		
Bootstrap support for A9W9P7 as seed ortholog is 100%.
Bootstrap support for L0P9P8 as seed ortholog is 100%.

Group of orthologs #69. Best score 230 bits
Score difference with first non-orthologous sequence - C.aurantiacus:230 P.jiroveci:230

A9WI03              	100.00%		L0PA45              	100.00%
Bootstrap support for A9WI03 as seed ortholog is 100%.
Bootstrap support for L0PA45 as seed ortholog is 100%.

Group of orthologs #70. Best score 227 bits
Score difference with first non-orthologous sequence - C.aurantiacus:227 P.jiroveci:33

A9WA97              	100.00%		L0PEL0              	100.00%
Bootstrap support for A9WA97 as seed ortholog is 100%.
Bootstrap support for L0PEL0 as seed ortholog is 75%.

Group of orthologs #71. Best score 225 bits
Score difference with first non-orthologous sequence - C.aurantiacus:35 P.jiroveci:225

A9WKM7              	100.00%		L0PA23              	100.00%
Bootstrap support for A9WKM7 as seed ortholog is 81%.
Bootstrap support for L0PA23 as seed ortholog is 100%.

Group of orthologs #72. Best score 221 bits
Score difference with first non-orthologous sequence - C.aurantiacus:221 P.jiroveci:221

A9WH12              	100.00%		L0PG77              	100.00%
                    	       		L0P9P7              	10.10%
Bootstrap support for A9WH12 as seed ortholog is 100%.
Bootstrap support for L0PG77 as seed ortholog is 100%.

Group of orthologs #73. Best score 217 bits
Score difference with first non-orthologous sequence - C.aurantiacus:44 P.jiroveci:41

A9WEX0              	100.00%		L0PG51              	100.00%
Bootstrap support for A9WEX0 as seed ortholog is 99%.
Bootstrap support for L0PG51 as seed ortholog is 87%.

Group of orthologs #74. Best score 217 bits
Score difference with first non-orthologous sequence - C.aurantiacus:217 P.jiroveci:217

A9WH03              	100.00%		L0PG02              	100.00%
Bootstrap support for A9WH03 as seed ortholog is 100%.
Bootstrap support for L0PG02 as seed ortholog is 100%.

Group of orthologs #75. Best score 216 bits
Score difference with first non-orthologous sequence - C.aurantiacus:99 P.jiroveci:216

A9WE79              	100.00%		L0PGW6              	100.00%
Bootstrap support for A9WE79 as seed ortholog is 99%.
Bootstrap support for L0PGW6 as seed ortholog is 100%.

Group of orthologs #76. Best score 213 bits
Score difference with first non-orthologous sequence - C.aurantiacus:213 P.jiroveci:213

A9WA78              	100.00%		L0PAG8              	100.00%
Bootstrap support for A9WA78 as seed ortholog is 100%.
Bootstrap support for L0PAG8 as seed ortholog is 100%.

Group of orthologs #77. Best score 209 bits
Score difference with first non-orthologous sequence - C.aurantiacus:209 P.jiroveci:209

A9WEH7              	100.00%		L0PCW8              	100.00%
Bootstrap support for A9WEH7 as seed ortholog is 100%.
Bootstrap support for L0PCW8 as seed ortholog is 100%.

Group of orthologs #78. Best score 206 bits
Score difference with first non-orthologous sequence - C.aurantiacus:206 P.jiroveci:62

A9WFD8              	100.00%		L0PC93              	100.00%
Bootstrap support for A9WFD8 as seed ortholog is 100%.
Bootstrap support for L0PC93 as seed ortholog is 81%.

Group of orthologs #79. Best score 204 bits
Score difference with first non-orthologous sequence - C.aurantiacus:204 P.jiroveci:204

A9WCH6              	100.00%		L0PBY6              	100.00%
Bootstrap support for A9WCH6 as seed ortholog is 100%.
Bootstrap support for L0PBY6 as seed ortholog is 100%.

Group of orthologs #80. Best score 201 bits
Score difference with first non-orthologous sequence - C.aurantiacus:201 P.jiroveci:201

A9WJ10              	100.00%		L0P7B5              	100.00%
Bootstrap support for A9WJ10 as seed ortholog is 100%.
Bootstrap support for L0P7B5 as seed ortholog is 100%.

Group of orthologs #81. Best score 200 bits
Score difference with first non-orthologous sequence - C.aurantiacus:200 P.jiroveci:200

A9WK73              	100.00%		L0PI19              	100.00%
Bootstrap support for A9WK73 as seed ortholog is 100%.
Bootstrap support for L0PI19 as seed ortholog is 100%.

Group of orthologs #82. Best score 198 bits
Score difference with first non-orthologous sequence - C.aurantiacus:198 P.jiroveci:198

A9WG15              	100.00%		L0PGV2              	100.00%
                    	       		L0PG40              	64.03%
Bootstrap support for A9WG15 as seed ortholog is 100%.
Bootstrap support for L0PGV2 as seed ortholog is 100%.

Group of orthologs #83. Best score 196 bits
Score difference with first non-orthologous sequence - C.aurantiacus:60 P.jiroveci:196

A9WD13              	100.00%		L0PB68              	100.00%
                    	       		L0PCQ8              	22.04%
Bootstrap support for A9WD13 as seed ortholog is 89%.
Bootstrap support for L0PB68 as seed ortholog is 100%.

Group of orthologs #84. Best score 195 bits
Score difference with first non-orthologous sequence - C.aurantiacus:195 P.jiroveci:6

A9WE34              	100.00%		L0P9N8              	100.00%
Bootstrap support for A9WE34 as seed ortholog is 100%.
Bootstrap support for L0P9N8 as seed ortholog is 56%.
Alternative seed ortholog is L0PAU1 (6 bits away from this cluster)

Group of orthologs #85. Best score 194 bits
Score difference with first non-orthologous sequence - C.aurantiacus:194 P.jiroveci:194

A9WIS5              	100.00%		L0PEY2              	100.00%
Bootstrap support for A9WIS5 as seed ortholog is 100%.
Bootstrap support for L0PEY2 as seed ortholog is 100%.

Group of orthologs #86. Best score 193 bits
Score difference with first non-orthologous sequence - C.aurantiacus:193 P.jiroveci:193

A9WDI1              	100.00%		L0PG08              	100.00%
Bootstrap support for A9WDI1 as seed ortholog is 100%.
Bootstrap support for L0PG08 as seed ortholog is 100%.

Group of orthologs #87. Best score 192 bits
Score difference with first non-orthologous sequence - C.aurantiacus:192 P.jiroveci:192

A9WIX0              	100.00%		L0P723              	100.00%
Bootstrap support for A9WIX0 as seed ortholog is 100%.
Bootstrap support for L0P723 as seed ortholog is 100%.

Group of orthologs #88. Best score 192 bits
Score difference with first non-orthologous sequence - C.aurantiacus:192 P.jiroveci:55

A9WJD1              	100.00%		L0P9R7              	100.00%
Bootstrap support for A9WJD1 as seed ortholog is 100%.
Bootstrap support for L0P9R7 as seed ortholog is 90%.

Group of orthologs #89. Best score 191 bits
Score difference with first non-orthologous sequence - C.aurantiacus:191 P.jiroveci:191

A9WD90              	100.00%		L0PC44              	100.00%
Bootstrap support for A9WD90 as seed ortholog is 100%.
Bootstrap support for L0PC44 as seed ortholog is 100%.

Group of orthologs #90. Best score 190 bits
Score difference with first non-orthologous sequence - C.aurantiacus:190 P.jiroveci:190

A9WII1              	100.00%		L0P6U6              	100.00%
A9WFQ7              	10.01%		
Bootstrap support for A9WII1 as seed ortholog is 100%.
Bootstrap support for L0P6U6 as seed ortholog is 100%.

Group of orthologs #91. Best score 190 bits
Score difference with first non-orthologous sequence - C.aurantiacus:190 P.jiroveci:190

A9WJT4              	100.00%		L0PF80              	100.00%
Bootstrap support for A9WJT4 as seed ortholog is 100%.
Bootstrap support for L0PF80 as seed ortholog is 100%.

Group of orthologs #92. Best score 185 bits
Score difference with first non-orthologous sequence - C.aurantiacus:113 P.jiroveci:185

A9WEY3              	100.00%		L0P7D2              	100.00%
A9WGN8              	23.01%		
Bootstrap support for A9WEY3 as seed ortholog is 99%.
Bootstrap support for L0P7D2 as seed ortholog is 100%.

Group of orthologs #93. Best score 182 bits
Score difference with first non-orthologous sequence - C.aurantiacus:182 P.jiroveci:182

A9WIS3              	100.00%		L0P9Y7              	100.00%
Bootstrap support for A9WIS3 as seed ortholog is 100%.
Bootstrap support for L0P9Y7 as seed ortholog is 100%.

Group of orthologs #94. Best score 175 bits
Score difference with first non-orthologous sequence - C.aurantiacus:59 P.jiroveci:175

A9WHM1              	100.00%		L0PFN4              	100.00%
Bootstrap support for A9WHM1 as seed ortholog is 82%.
Bootstrap support for L0PFN4 as seed ortholog is 100%.

Group of orthologs #95. Best score 173 bits
Score difference with first non-orthologous sequence - C.aurantiacus:173 P.jiroveci:173

A9WIS6              	100.00%		L0PHG9              	100.00%
Bootstrap support for A9WIS6 as seed ortholog is 100%.
Bootstrap support for L0PHG9 as seed ortholog is 100%.

Group of orthologs #96. Best score 172 bits
Score difference with first non-orthologous sequence - C.aurantiacus:172 P.jiroveci:172

A9WI99              	100.00%		L0PBE8              	100.00%
Bootstrap support for A9WI99 as seed ortholog is 100%.
Bootstrap support for L0PBE8 as seed ortholog is 100%.

Group of orthologs #97. Best score 172 bits
Score difference with first non-orthologous sequence - C.aurantiacus:172 P.jiroveci:172

A9WJ86              	100.00%		L0PGJ5              	100.00%
Bootstrap support for A9WJ86 as seed ortholog is 100%.
Bootstrap support for L0PGJ5 as seed ortholog is 100%.

Group of orthologs #98. Best score 171 bits
Score difference with first non-orthologous sequence - C.aurantiacus:100 P.jiroveci:171

A9WG07              	100.00%		L0PGL1              	100.00%
A9WIK4              	14.25%		
A9WFH5              	13.18%		
A9WAM1              	12.71%		
A9WEJ4              	12.35%		
A9WBE3              	11.64%		
Bootstrap support for A9WG07 as seed ortholog is 96%.
Bootstrap support for L0PGL1 as seed ortholog is 100%.

Group of orthologs #99. Best score 168 bits
Score difference with first non-orthologous sequence - C.aurantiacus:168 P.jiroveci:168

A9WHN0              	100.00%		L0PAT1              	100.00%
Bootstrap support for A9WHN0 as seed ortholog is 100%.
Bootstrap support for L0PAT1 as seed ortholog is 100%.

Group of orthologs #100. Best score 165 bits
Score difference with first non-orthologous sequence - C.aurantiacus:165 P.jiroveci:74

A9WH69              	100.00%		L0PEA3              	100.00%
Bootstrap support for A9WH69 as seed ortholog is 100%.
Bootstrap support for L0PEA3 as seed ortholog is 97%.

Group of orthologs #101. Best score 165 bits
Score difference with first non-orthologous sequence - C.aurantiacus:165 P.jiroveci:165

A9WKE3              	100.00%		L0PG43              	100.00%
Bootstrap support for A9WKE3 as seed ortholog is 100%.
Bootstrap support for L0PG43 as seed ortholog is 100%.

Group of orthologs #102. Best score 163 bits
Score difference with first non-orthologous sequence - C.aurantiacus:163 P.jiroveci:84

A9WCD8              	100.00%		L0PEA1              	100.00%
A9W9W9              	8.82%		
A9WBL1              	8.20%		
A9WES7              	6.46%		
Bootstrap support for A9WCD8 as seed ortholog is 100%.
Bootstrap support for L0PEA1 as seed ortholog is 99%.

Group of orthologs #103. Best score 158 bits
Score difference with first non-orthologous sequence - C.aurantiacus:158 P.jiroveci:158

A9WKB1              	100.00%		L0PF58              	100.00%
A9WB73              	34.15%		
Bootstrap support for A9WKB1 as seed ortholog is 100%.
Bootstrap support for L0PF58 as seed ortholog is 100%.

Group of orthologs #104. Best score 158 bits
Score difference with first non-orthologous sequence - C.aurantiacus:158 P.jiroveci:158

A9WH66              	100.00%		L0PEZ4              	100.00%
Bootstrap support for A9WH66 as seed ortholog is 100%.
Bootstrap support for L0PEZ4 as seed ortholog is 100%.

Group of orthologs #105. Best score 154 bits
Score difference with first non-orthologous sequence - C.aurantiacus:154 P.jiroveci:154

P96744              	100.00%		L0PF73              	100.00%
Bootstrap support for P96744 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #106. Best score 149 bits
Score difference with first non-orthologous sequence - C.aurantiacus:149 P.jiroveci:64

A9WIV9              	100.00%		L0PBY2              	100.00%
Bootstrap support for A9WIV9 as seed ortholog is 100%.
Bootstrap support for L0PBY2 as seed ortholog is 92%.

Group of orthologs #107. Best score 145 bits
Score difference with first non-orthologous sequence - C.aurantiacus:145 P.jiroveci:145

A9WEG5              	100.00%		L0PFP0              	100.00%
Bootstrap support for A9WEG5 as seed ortholog is 100%.
Bootstrap support for L0PFP0 as seed ortholog is 100%.

Group of orthologs #108. Best score 144 bits
Score difference with first non-orthologous sequence - C.aurantiacus:144 P.jiroveci:144

A9WAG3              	100.00%		L0PFS1              	100.00%
Bootstrap support for A9WAG3 as seed ortholog is 100%.
Bootstrap support for L0PFS1 as seed ortholog is 100%.

Group of orthologs #109. Best score 141 bits
Score difference with first non-orthologous sequence - C.aurantiacus:141 P.jiroveci:141

A9WAW6              	100.00%		L0PC06              	100.00%
Bootstrap support for A9WAW6 as seed ortholog is 100%.
Bootstrap support for L0PC06 as seed ortholog is 100%.

Group of orthologs #110. Best score 139 bits
Score difference with first non-orthologous sequence - C.aurantiacus:139 P.jiroveci:139

A9WGU9              	100.00%		L0PDF2              	100.00%
Bootstrap support for A9WGU9 as seed ortholog is 100%.
Bootstrap support for L0PDF2 as seed ortholog is 100%.

Group of orthologs #111. Best score 139 bits
Score difference with first non-orthologous sequence - C.aurantiacus:139 P.jiroveci:69

A9WH87              	100.00%		L0PEX1              	100.00%
Bootstrap support for A9WH87 as seed ortholog is 100%.
Bootstrap support for L0PEX1 as seed ortholog is 98%.

Group of orthologs #112. Best score 138 bits
Score difference with first non-orthologous sequence - C.aurantiacus:138 P.jiroveci:138

A9WDK3              	100.00%		L0P923              	100.00%
Bootstrap support for A9WDK3 as seed ortholog is 100%.
Bootstrap support for L0P923 as seed ortholog is 100%.

Group of orthologs #113. Best score 138 bits
Score difference with first non-orthologous sequence - C.aurantiacus:138 P.jiroveci:23

A9WDT0              	100.00%		L0PF87              	100.00%
Bootstrap support for A9WDT0 as seed ortholog is 100%.
Bootstrap support for L0PF87 as seed ortholog is 70%.
Alternative seed ortholog is L0PEG1 (23 bits away from this cluster)

Group of orthologs #114. Best score 135 bits
Score difference with first non-orthologous sequence - C.aurantiacus:55 P.jiroveci:90

A9WBW8              	100.00%		L0PAG1              	100.00%
A9WGJ8              	6.33%		
Bootstrap support for A9WBW8 as seed ortholog is 91%.
Bootstrap support for L0PAG1 as seed ortholog is 99%.

Group of orthologs #115. Best score 134 bits
Score difference with first non-orthologous sequence - C.aurantiacus:44 P.jiroveci:72

A9WKH9              	100.00%		L0P903              	100.00%
A9WHA5              	37.83%		
A9WAD1              	34.60%		
A9WHA6              	25.51%		
A9WIZ1              	23.46%		
A9WDB9              	15.84%		
A9WJN4              	13.20%		
A9WCF8              	12.32%		
A9WHE6              	6.16%		
Bootstrap support for A9WKH9 as seed ortholog is 91%.
Bootstrap support for L0P903 as seed ortholog is 98%.

Group of orthologs #116. Best score 133 bits
Score difference with first non-orthologous sequence - C.aurantiacus:23 P.jiroveci:133

A9WGX0              	100.00%		L0PBE4              	100.00%
Bootstrap support for A9WGX0 as seed ortholog is 61%.
Alternative seed ortholog is A9WJJ2 (23 bits away from this cluster)
Bootstrap support for L0PBE4 as seed ortholog is 100%.

Group of orthologs #117. Best score 133 bits
Score difference with first non-orthologous sequence - C.aurantiacus:133 P.jiroveci:133

A9WKM1              	100.00%		L0PA88              	100.00%
Bootstrap support for A9WKM1 as seed ortholog is 100%.
Bootstrap support for L0PA88 as seed ortholog is 100%.

Group of orthologs #118. Best score 133 bits
Score difference with first non-orthologous sequence - C.aurantiacus:133 P.jiroveci:133

A9WGP6              	100.00%		L0PEP7              	100.00%
Bootstrap support for A9WGP6 as seed ortholog is 100%.
Bootstrap support for L0PEP7 as seed ortholog is 100%.

Group of orthologs #119. Best score 132 bits
Score difference with first non-orthologous sequence - C.aurantiacus:132 P.jiroveci:12

A9WI18              	100.00%		L0PA57              	100.00%
Bootstrap support for A9WI18 as seed ortholog is 100%.
Bootstrap support for L0PA57 as seed ortholog is 61%.
Alternative seed ortholog is L0PGB9 (12 bits away from this cluster)

Group of orthologs #120. Best score 129 bits
Score difference with first non-orthologous sequence - C.aurantiacus:129 P.jiroveci:129

A9WCZ3              	100.00%		L0PD03              	100.00%
                    	       		L0P861              	30.09%
Bootstrap support for A9WCZ3 as seed ortholog is 100%.
Bootstrap support for L0PD03 as seed ortholog is 100%.

Group of orthologs #121. Best score 128 bits
Score difference with first non-orthologous sequence - C.aurantiacus:88 P.jiroveci:128

A9WG97              	100.00%		L0P8J0              	100.00%
Bootstrap support for A9WG97 as seed ortholog is 99%.
Bootstrap support for L0P8J0 as seed ortholog is 100%.

Group of orthologs #122. Best score 128 bits
Score difference with first non-orthologous sequence - C.aurantiacus:128 P.jiroveci:128

A9WIL6              	100.00%		L0PGR0              	100.00%
Bootstrap support for A9WIL6 as seed ortholog is 100%.
Bootstrap support for L0PGR0 as seed ortholog is 100%.

Group of orthologs #123. Best score 126 bits
Score difference with first non-orthologous sequence - C.aurantiacus:126 P.jiroveci:126

A9WA13              	100.00%		L0PG76              	100.00%
                    	       		L0PE70              	58.33%
Bootstrap support for A9WA13 as seed ortholog is 100%.
Bootstrap support for L0PG76 as seed ortholog is 100%.

Group of orthologs #124. Best score 126 bits
Score difference with first non-orthologous sequence - C.aurantiacus:126 P.jiroveci:37

A9WDN0              	100.00%		L0P7R5              	100.00%
Bootstrap support for A9WDN0 as seed ortholog is 100%.
Bootstrap support for L0P7R5 as seed ortholog is 80%.

Group of orthologs #125. Best score 126 bits
Score difference with first non-orthologous sequence - C.aurantiacus:126 P.jiroveci:126

A9WH31              	100.00%		L0PFX9              	100.00%
Bootstrap support for A9WH31 as seed ortholog is 100%.
Bootstrap support for L0PFX9 as seed ortholog is 100%.

Group of orthologs #126. Best score 125 bits
Score difference with first non-orthologous sequence - C.aurantiacus:125 P.jiroveci:125

A9WEH9              	100.00%		L0PBL5              	100.00%
Bootstrap support for A9WEH9 as seed ortholog is 100%.
Bootstrap support for L0PBL5 as seed ortholog is 100%.

Group of orthologs #127. Best score 124 bits
Score difference with first non-orthologous sequence - C.aurantiacus:124 P.jiroveci:124

A9WAF9              	100.00%		L0PFQ6              	100.00%
Bootstrap support for A9WAF9 as seed ortholog is 100%.
Bootstrap support for L0PFQ6 as seed ortholog is 100%.

Group of orthologs #128. Best score 118 bits
Score difference with first non-orthologous sequence - C.aurantiacus:118 P.jiroveci:118

A9WJ20              	100.00%		L0P9S1              	100.00%
Bootstrap support for A9WJ20 as seed ortholog is 100%.
Bootstrap support for L0P9S1 as seed ortholog is 100%.

Group of orthologs #129. Best score 116 bits
Score difference with first non-orthologous sequence - C.aurantiacus:116 P.jiroveci:61

A9WH60              	100.00%		L0P8A1              	100.00%
Bootstrap support for A9WH60 as seed ortholog is 100%.
Bootstrap support for L0P8A1 as seed ortholog is 99%.

Group of orthologs #130. Best score 116 bits
Score difference with first non-orthologous sequence - C.aurantiacus:116 P.jiroveci:116

A9WIA0              	100.00%		L0PFR9              	100.00%
Bootstrap support for A9WIA0 as seed ortholog is 100%.
Bootstrap support for L0PFR9 as seed ortholog is 100%.

Group of orthologs #131. Best score 115 bits
Score difference with first non-orthologous sequence - C.aurantiacus:115 P.jiroveci:7

A9WKF2              	100.00%		L0PAA8              	100.00%
Bootstrap support for A9WKF2 as seed ortholog is 100%.
Bootstrap support for L0PAA8 as seed ortholog is 61%.
Alternative seed ortholog is L0PFQ4 (7 bits away from this cluster)

Group of orthologs #132. Best score 113 bits
Score difference with first non-orthologous sequence - C.aurantiacus:113 P.jiroveci:113

A9WII8              	100.00%		L0P9I6              	100.00%
Bootstrap support for A9WII8 as seed ortholog is 100%.
Bootstrap support for L0P9I6 as seed ortholog is 100%.

Group of orthologs #133. Best score 112 bits
Score difference with first non-orthologous sequence - C.aurantiacus:112 P.jiroveci:112

A9WFH2              	100.00%		L0PD52              	100.00%
                    	       		L0PDL8              	100.00%
Bootstrap support for A9WFH2 as seed ortholog is 100%.
Bootstrap support for L0PD52 as seed ortholog is 100%.
Bootstrap support for L0PDL8 as seed ortholog is 100%.

Group of orthologs #134. Best score 111 bits
Score difference with first non-orthologous sequence - C.aurantiacus:111 P.jiroveci:111

A9WKJ4              	100.00%		L0PCK5              	100.00%
                    	       		L0PGY9              	59.25%
                    	       		L0PA98              	33.44%
Bootstrap support for A9WKJ4 as seed ortholog is 100%.
Bootstrap support for L0PCK5 as seed ortholog is 100%.

Group of orthologs #135. Best score 109 bits
Score difference with first non-orthologous sequence - C.aurantiacus:109 P.jiroveci:5

A9WBR9              	100.00%		L0P905              	100.00%
A9WGB0              	22.72%		
Bootstrap support for A9WBR9 as seed ortholog is 100%.
Bootstrap support for L0P905 as seed ortholog is 48%.
Alternative seed ortholog is L0PDF1 (5 bits away from this cluster)

Group of orthologs #136. Best score 109 bits
Score difference with first non-orthologous sequence - C.aurantiacus:109 P.jiroveci:109

A9WFV8              	100.00%		L0PIW1              	100.00%
A9W9W8              	15.08%		
Bootstrap support for A9WFV8 as seed ortholog is 100%.
Bootstrap support for L0PIW1 as seed ortholog is 100%.

Group of orthologs #137. Best score 108 bits
Score difference with first non-orthologous sequence - C.aurantiacus:108 P.jiroveci:108

A9WDH5              	100.00%		L0P8R6              	100.00%
Bootstrap support for A9WDH5 as seed ortholog is 100%.
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #138. Best score 108 bits
Score difference with first non-orthologous sequence - C.aurantiacus:108 P.jiroveci:108

A9WH36              	100.00%		L0P8G8              	100.00%
Bootstrap support for A9WH36 as seed ortholog is 100%.
Bootstrap support for L0P8G8 as seed ortholog is 100%.

Group of orthologs #139. Best score 108 bits
Score difference with first non-orthologous sequence - C.aurantiacus:108 P.jiroveci:108

A9WEF6              	100.00%		L0PHW2              	100.00%
Bootstrap support for A9WEF6 as seed ortholog is 100%.
Bootstrap support for L0PHW2 as seed ortholog is 100%.

Group of orthologs #140. Best score 107 bits
Score difference with first non-orthologous sequence - C.aurantiacus:41 P.jiroveci:107

A9WDQ1              	100.00%		L0PD58              	100.00%
Bootstrap support for A9WDQ1 as seed ortholog is 88%.
Bootstrap support for L0PD58 as seed ortholog is 100%.

Group of orthologs #141. Best score 107 bits
Score difference with first non-orthologous sequence - C.aurantiacus:107 P.jiroveci:51

A9WJC9              	100.00%		L0PD77              	100.00%
Bootstrap support for A9WJC9 as seed ortholog is 100%.
Bootstrap support for L0PD77 as seed ortholog is 94%.

Group of orthologs #142. Best score 106 bits
Score difference with first non-orthologous sequence - C.aurantiacus:106 P.jiroveci:106

A9W9X8              	100.00%		L0PDL1              	100.00%
Bootstrap support for A9W9X8 as seed ortholog is 100%.
Bootstrap support for L0PDL1 as seed ortholog is 100%.

Group of orthologs #143. Best score 106 bits
Score difference with first non-orthologous sequence - C.aurantiacus:106 P.jiroveci:106

A9WH67              	100.00%		L0PAW5              	100.00%
Bootstrap support for A9WH67 as seed ortholog is 100%.
Bootstrap support for L0PAW5 as seed ortholog is 100%.

Group of orthologs #144. Best score 106 bits
Score difference with first non-orthologous sequence - C.aurantiacus:106 P.jiroveci:106

A9WCA4              	100.00%		L0PGG1              	100.00%
Bootstrap support for A9WCA4 as seed ortholog is 100%.
Bootstrap support for L0PGG1 as seed ortholog is 100%.

Group of orthologs #145. Best score 105 bits
Score difference with first non-orthologous sequence - C.aurantiacus:33 P.jiroveci:10

A9WJI8              	100.00%		L0PD82              	100.00%
                    	       		L0P6Q8              	43.25%
                    	       		L0P8N0              	6.28%
Bootstrap support for A9WJI8 as seed ortholog is 81%.
Bootstrap support for L0PD82 as seed ortholog is 84%.

Group of orthologs #146. Best score 103 bits
Score difference with first non-orthologous sequence - C.aurantiacus:103 P.jiroveci:103

A9WFP6              	100.00%		L0PCZ5              	100.00%
Bootstrap support for A9WFP6 as seed ortholog is 100%.
Bootstrap support for L0PCZ5 as seed ortholog is 100%.

Group of orthologs #147. Best score 102 bits
Score difference with first non-orthologous sequence - C.aurantiacus:102 P.jiroveci:102

A9WJS7              	100.00%		L0P8V0              	100.00%
A9WBI8              	8.88%		
Bootstrap support for A9WJS7 as seed ortholog is 100%.
Bootstrap support for L0P8V0 as seed ortholog is 100%.

Group of orthologs #148. Best score 101 bits
Score difference with first non-orthologous sequence - C.aurantiacus:101 P.jiroveci:101

A9WFE7              	100.00%		L0PEL2              	100.00%
Bootstrap support for A9WFE7 as seed ortholog is 100%.
Bootstrap support for L0PEL2 as seed ortholog is 100%.

Group of orthologs #149. Best score 100 bits
Score difference with first non-orthologous sequence - C.aurantiacus:100 P.jiroveci:100

A9WFR1              	100.00%		L0PBL4              	100.00%
Bootstrap support for A9WFR1 as seed ortholog is 100%.
Bootstrap support for L0PBL4 as seed ortholog is 100%.

Group of orthologs #150. Best score 99 bits
Score difference with first non-orthologous sequence - C.aurantiacus:99 P.jiroveci:99

A9WEV1              	100.00%		L0P9P0              	100.00%
Bootstrap support for A9WEV1 as seed ortholog is 100%.
Bootstrap support for L0P9P0 as seed ortholog is 100%.

Group of orthologs #151. Best score 99 bits
Score difference with first non-orthologous sequence - C.aurantiacus:25 P.jiroveci:99

A9WFB3              	100.00%		L0PBA4              	100.00%
Bootstrap support for A9WFB3 as seed ortholog is 84%.
Bootstrap support for L0PBA4 as seed ortholog is 100%.

Group of orthologs #152. Best score 98 bits
Score difference with first non-orthologous sequence - C.aurantiacus:98 P.jiroveci:46

A9WH78              	100.00%		L0PBK3              	100.00%
Bootstrap support for A9WH78 as seed ortholog is 100%.
Bootstrap support for L0PBK3 as seed ortholog is 96%.

Group of orthologs #153. Best score 97 bits
Score difference with first non-orthologous sequence - C.aurantiacus:97 P.jiroveci:97

A9WC70              	100.00%		L0PCV1              	100.00%
Bootstrap support for A9WC70 as seed ortholog is 100%.
Bootstrap support for L0PCV1 as seed ortholog is 100%.

Group of orthologs #154. Best score 97 bits
Score difference with first non-orthologous sequence - C.aurantiacus:97 P.jiroveci:97

A9WJM8              	100.00%		L0PGV5              	100.00%
Bootstrap support for A9WJM8 as seed ortholog is 100%.
Bootstrap support for L0PGV5 as seed ortholog is 100%.

Group of orthologs #155. Best score 96 bits
Score difference with first non-orthologous sequence - C.aurantiacus:96 P.jiroveci:29

A9WK14              	100.00%		L0PGP6              	100.00%
                    	       		L0P8I7              	7.17%
                    	       		L0P8M4              	6.19%
Bootstrap support for A9WK14 as seed ortholog is 100%.
Bootstrap support for L0PGP6 as seed ortholog is 94%.

Group of orthologs #156. Best score 96 bits
Score difference with first non-orthologous sequence - C.aurantiacus:96 P.jiroveci:38

A9WHG4              	100.00%		L0P982              	100.00%
Bootstrap support for A9WHG4 as seed ortholog is 100%.
Bootstrap support for L0P982 as seed ortholog is 83%.

Group of orthologs #157. Best score 96 bits
Score difference with first non-orthologous sequence - C.aurantiacus:96 P.jiroveci:96

A9WH96              	100.00%		L0PDS8              	100.00%
Bootstrap support for A9WH96 as seed ortholog is 100%.
Bootstrap support for L0PDS8 as seed ortholog is 100%.

Group of orthologs #158. Best score 95 bits
Score difference with first non-orthologous sequence - C.aurantiacus:95 P.jiroveci:95

A9WJK9              	100.00%		L0P9H8              	100.00%
Bootstrap support for A9WJK9 as seed ortholog is 100%.
Bootstrap support for L0P9H8 as seed ortholog is 100%.

Group of orthologs #159. Best score 94 bits
Score difference with first non-orthologous sequence - C.aurantiacus:94 P.jiroveci:94

A9WIN1              	100.00%		L0PAW7              	100.00%
Bootstrap support for A9WIN1 as seed ortholog is 100%.
Bootstrap support for L0PAW7 as seed ortholog is 100%.

Group of orthologs #160. Best score 93 bits
Score difference with first non-orthologous sequence - C.aurantiacus:93 P.jiroveci:93

A9WBN4              	100.00%		L0PBL2              	100.00%
Bootstrap support for A9WBN4 as seed ortholog is 100%.
Bootstrap support for L0PBL2 as seed ortholog is 100%.

Group of orthologs #161. Best score 93 bits
Score difference with first non-orthologous sequence - C.aurantiacus:3 P.jiroveci:93

A9WC12              	100.00%		L0PD68              	100.00%
Bootstrap support for A9WC12 as seed ortholog is 52%.
Alternative seed ortholog is A9W9R0 (3 bits away from this cluster)
Bootstrap support for L0PD68 as seed ortholog is 100%.

Group of orthologs #162. Best score 93 bits
Score difference with first non-orthologous sequence - C.aurantiacus:93 P.jiroveci:93

A9WCM5              	100.00%		L0PDR3              	100.00%
Bootstrap support for A9WCM5 as seed ortholog is 100%.
Bootstrap support for L0PDR3 as seed ortholog is 100%.

Group of orthologs #163. Best score 92 bits
Score difference with first non-orthologous sequence - C.aurantiacus:92 P.jiroveci:92

A9WHP2              	100.00%		L0P8Y0              	100.00%
Bootstrap support for A9WHP2 as seed ortholog is 100%.
Bootstrap support for L0P8Y0 as seed ortholog is 100%.

Group of orthologs #164. Best score 91 bits
Score difference with first non-orthologous sequence - C.aurantiacus:91 P.jiroveci:91

A9WFQ9              	100.00%		L0P9Q1              	100.00%
Bootstrap support for A9WFQ9 as seed ortholog is 100%.
Bootstrap support for L0P9Q1 as seed ortholog is 100%.

Group of orthologs #165. Best score 90 bits
Score difference with first non-orthologous sequence - C.aurantiacus:90 P.jiroveci:90

A9WAC5              	100.00%		L0P957              	100.00%
Bootstrap support for A9WAC5 as seed ortholog is 100%.
Bootstrap support for L0P957 as seed ortholog is 100%.

Group of orthologs #166. Best score 90 bits
Score difference with first non-orthologous sequence - C.aurantiacus:90 P.jiroveci:90

A9WAJ2              	100.00%		L0PFQ3              	100.00%
Bootstrap support for A9WAJ2 as seed ortholog is 100%.
Bootstrap support for L0PFQ3 as seed ortholog is 100%.

Group of orthologs #167. Best score 89 bits
Score difference with first non-orthologous sequence - C.aurantiacus:89 P.jiroveci:89

A9WD24              	100.00%		L0P826              	100.00%
Bootstrap support for A9WD24 as seed ortholog is 100%.
Bootstrap support for L0P826 as seed ortholog is 100%.

Group of orthologs #168. Best score 89 bits
Score difference with first non-orthologous sequence - C.aurantiacus:89 P.jiroveci:89

A9WEX2              	100.00%		L0P8K4              	100.00%
Bootstrap support for A9WEX2 as seed ortholog is 100%.
Bootstrap support for L0P8K4 as seed ortholog is 100%.

Group of orthologs #169. Best score 88 bits
Score difference with first non-orthologous sequence - C.aurantiacus:88 P.jiroveci:88

A9WCA8              	100.00%		L0PAZ7              	100.00%
                    	       		L0PAH9              	84.39%
Bootstrap support for A9WCA8 as seed ortholog is 100%.
Bootstrap support for L0PAZ7 as seed ortholog is 100%.

Group of orthologs #170. Best score 86 bits
Score difference with first non-orthologous sequence - C.aurantiacus:86 P.jiroveci:86

A9WH73              	100.00%		L0P875              	100.00%
Bootstrap support for A9WH73 as seed ortholog is 100%.
Bootstrap support for L0P875 as seed ortholog is 100%.

Group of orthologs #171. Best score 86 bits
Score difference with first non-orthologous sequence - C.aurantiacus:86 P.jiroveci:86

A9WEW1              	100.00%		L0PCU7              	100.00%
Bootstrap support for A9WEW1 as seed ortholog is 100%.
Bootstrap support for L0PCU7 as seed ortholog is 100%.

Group of orthologs #172. Best score 85 bits
Score difference with first non-orthologous sequence - C.aurantiacus:85 P.jiroveci:85

A9WDC5              	100.00%		L0PFG9              	100.00%
Bootstrap support for A9WDC5 as seed ortholog is 100%.
Bootstrap support for L0PFG9 as seed ortholog is 100%.

Group of orthologs #173. Best score 84 bits
Score difference with first non-orthologous sequence - C.aurantiacus:84 P.jiroveci:84

A9WIJ8              	100.00%		L0PA92              	100.00%
                    	       		L0P8X8              	50.11%
Bootstrap support for A9WIJ8 as seed ortholog is 100%.
Bootstrap support for L0PA92 as seed ortholog is 100%.

Group of orthologs #174. Best score 82 bits
Score difference with first non-orthologous sequence - C.aurantiacus:28 P.jiroveci:82

A9WF52              	100.00%		L0PFZ6              	100.00%
                    	       		L0P7L2              	96.83%
Bootstrap support for A9WF52 as seed ortholog is 79%.
Bootstrap support for L0PFZ6 as seed ortholog is 100%.

Group of orthologs #175. Best score 82 bits
Score difference with first non-orthologous sequence - C.aurantiacus:82 P.jiroveci:82

A9WC41              	100.00%		L0PDE8              	100.00%
Bootstrap support for A9WC41 as seed ortholog is 100%.
Bootstrap support for L0PDE8 as seed ortholog is 100%.

Group of orthologs #176. Best score 82 bits
Score difference with first non-orthologous sequence - C.aurantiacus:82 P.jiroveci:18

A9WH90              	100.00%		L0PBR8              	100.00%
Bootstrap support for A9WH90 as seed ortholog is 100%.
Bootstrap support for L0PBR8 as seed ortholog is 74%.
Alternative seed ortholog is L0PE58 (18 bits away from this cluster)

Group of orthologs #177. Best score 82 bits
Score difference with first non-orthologous sequence - C.aurantiacus:82 P.jiroveci:82

A9WJN8              	100.00%		L0PD91              	100.00%
Bootstrap support for A9WJN8 as seed ortholog is 100%.
Bootstrap support for L0PD91 as seed ortholog is 100%.

Group of orthologs #178. Best score 81 bits
Score difference with first non-orthologous sequence - C.aurantiacus:81 P.jiroveci:25

A9WH95              	100.00%		L0PEW5              	100.00%
Bootstrap support for A9WH95 as seed ortholog is 100%.
Bootstrap support for L0PEW5 as seed ortholog is 70%.
Alternative seed ortholog is L0P949 (25 bits away from this cluster)

Group of orthologs #179. Best score 80 bits
Score difference with first non-orthologous sequence - C.aurantiacus:80 P.jiroveci:80

A9WH85              	100.00%		L0P8T2              	100.00%
                    	       		L0PA19              	82.83%
Bootstrap support for A9WH85 as seed ortholog is 100%.
Bootstrap support for L0P8T2 as seed ortholog is 100%.

Group of orthologs #180. Best score 78 bits
Score difference with first non-orthologous sequence - C.aurantiacus:78 P.jiroveci:34

A9WJ17              	100.00%		L0PDG5              	100.00%
A9WGM8              	8.15%		
Bootstrap support for A9WJ17 as seed ortholog is 100%.
Bootstrap support for L0PDG5 as seed ortholog is 83%.

Group of orthologs #181. Best score 78 bits
Score difference with first non-orthologous sequence - C.aurantiacus:78 P.jiroveci:78

A9WGS5              	100.00%		L0P8C9              	100.00%
Bootstrap support for A9WGS5 as seed ortholog is 100%.
Bootstrap support for L0P8C9 as seed ortholog is 100%.

Group of orthologs #182. Best score 78 bits
Score difference with first non-orthologous sequence - C.aurantiacus:78 P.jiroveci:78

A9WEK3              	100.00%		L0PCN6              	100.00%
Bootstrap support for A9WEK3 as seed ortholog is 100%.
Bootstrap support for L0PCN6 as seed ortholog is 100%.

Group of orthologs #183. Best score 76 bits
Score difference with first non-orthologous sequence - C.aurantiacus:76 P.jiroveci:76

A9W9Q2              	100.00%		L0PBY9              	100.00%
Bootstrap support for A9W9Q2 as seed ortholog is 100%.
Bootstrap support for L0PBY9 as seed ortholog is 100%.

Group of orthologs #184. Best score 76 bits
Score difference with first non-orthologous sequence - C.aurantiacus:76 P.jiroveci:76

A9WFP0              	100.00%		L0P8P8              	100.00%
Bootstrap support for A9WFP0 as seed ortholog is 100%.
Bootstrap support for L0P8P8 as seed ortholog is 100%.

Group of orthologs #185. Best score 76 bits
Score difference with first non-orthologous sequence - C.aurantiacus:76 P.jiroveci:76

A9WD39              	100.00%		L0PGD9              	100.00%
Bootstrap support for A9WD39 as seed ortholog is 100%.
Bootstrap support for L0PGD9 as seed ortholog is 100%.

Group of orthologs #186. Best score 75 bits
Score difference with first non-orthologous sequence - C.aurantiacus:75 P.jiroveci:3

A9WG62              	100.00%		L0PAY3              	100.00%
A9WJF4              	100.00%		L0PF10              	100.00%
A9WAN4              	20.25%		L0PCJ3              	42.96%
A9WE74              	11.14%		L0PA26              	31.71%
A9WAT1              	7.97%		L0P980              	26.27%
                    	       		L0PD71              	25.16%
                    	       		L0P9Z0              	18.43%
                    	       		L0PBU5              	9.01%
                    	       		L0PE30              	8.82%
                    	       		L0P6W2              	7.88%
Bootstrap support for A9WG62 as seed ortholog is 100%.
Bootstrap support for A9WJF4 as seed ortholog is 100%.
Bootstrap support for L0PAY3 as seed ortholog is 45%.
Alternative seed ortholog is L0P7J6 (3 bits away from this cluster)
Bootstrap support for L0PF10 as seed ortholog is 56%.
Alternative seed ortholog is L0P7J6 (3 bits away from this cluster)

Group of orthologs #187. Best score 74 bits
Score difference with first non-orthologous sequence - C.aurantiacus:12 P.jiroveci:74

A9W9Q9              	100.00%		L0PF49              	100.00%
A9WKK0              	8.66%		
Bootstrap support for A9W9Q9 as seed ortholog is 60%.
Alternative seed ortholog is A9WHV5 (12 bits away from this cluster)
Bootstrap support for L0PF49 as seed ortholog is 100%.

Group of orthologs #188. Best score 73 bits
Score difference with first non-orthologous sequence - C.aurantiacus:14 P.jiroveci:73

A9WCU7              	100.00%		L0PCR9              	100.00%
A9WID7              	15.37%		L0PEH1              	8.78%
A9WBU2              	7.79%		
A9WGD8              	7.14%		
A9WD05              	7.14%		
A9WHP8              	5.63%		
A9WBN8              	5.63%		
A9WBN9              	5.41%		
A9WKK6              	5.41%		
Bootstrap support for A9WCU7 as seed ortholog is 69%.
Alternative seed ortholog is A9WDR8 (14 bits away from this cluster)
Bootstrap support for L0PCR9 as seed ortholog is 100%.

Group of orthologs #189. Best score 73 bits
Score difference with first non-orthologous sequence - C.aurantiacus:73 P.jiroveci:73

A9WKH6              	100.00%		L0PAS9              	100.00%
Bootstrap support for A9WKH6 as seed ortholog is 100%.
Bootstrap support for L0PAS9 as seed ortholog is 100%.

Group of orthologs #190. Best score 73 bits
Score difference with first non-orthologous sequence - C.aurantiacus:73 P.jiroveci:73

A9WH81              	100.00%		L0PFP9              	100.00%
Bootstrap support for A9WH81 as seed ortholog is 100%.
Bootstrap support for L0PFP9 as seed ortholog is 100%.

Group of orthologs #191. Best score 73 bits
Score difference with first non-orthologous sequence - C.aurantiacus:73 P.jiroveci:73

A9WHP1              	100.00%		L0PIR9              	100.00%
Bootstrap support for A9WHP1 as seed ortholog is 100%.
Bootstrap support for L0PIR9 as seed ortholog is 100%.

Group of orthologs #192. Best score 72 bits
Score difference with first non-orthologous sequence - C.aurantiacus:72 P.jiroveci:27

A9W9X6              	100.00%		L0P834              	100.00%
Bootstrap support for A9W9X6 as seed ortholog is 100%.
Bootstrap support for L0P834 as seed ortholog is 89%.

Group of orthologs #193. Best score 71 bits
Score difference with first non-orthologous sequence - C.aurantiacus:71 P.jiroveci:71

A9WAZ3              	100.00%		L0PAN5              	100.00%
Bootstrap support for A9WAZ3 as seed ortholog is 100%.
Bootstrap support for L0PAN5 as seed ortholog is 100%.

Group of orthologs #194. Best score 69 bits
Score difference with first non-orthologous sequence - C.aurantiacus:69 P.jiroveci:69

A9WE76              	100.00%		L0PE74              	100.00%
A9WAA4              	27.82%		
Bootstrap support for A9WE76 as seed ortholog is 100%.
Bootstrap support for L0PE74 as seed ortholog is 100%.

Group of orthologs #195. Best score 67 bits
Score difference with first non-orthologous sequence - C.aurantiacus:67 P.jiroveci:67

A9WBB0              	100.00%		L0PFM9              	100.00%
Bootstrap support for A9WBB0 as seed ortholog is 100%.
Bootstrap support for L0PFM9 as seed ortholog is 100%.

Group of orthologs #196. Best score 66 bits
Score difference with first non-orthologous sequence - C.aurantiacus:14 P.jiroveci:19

A9WHC4              	100.00%		L0P6Z2              	100.00%
A9WCP9              	19.61%		
A9WEE7              	14.66%		
A9WCZ7              	10.34%		
A9WC56              	10.34%		
A9WIQ3              	8.84%		
A9WAM8              	7.54%		
A9WBJ3              	6.68%		
A9WHY5              	6.47%		
A9WIL7              	6.03%		
A9WB71              	5.82%		
A9WG27              	5.82%		
A9WHW1              	5.39%		
A9WJF1              	5.39%		
Bootstrap support for A9WHC4 as seed ortholog is 66%.
Alternative seed ortholog is A9WJA6 (14 bits away from this cluster)
Bootstrap support for L0P6Z2 as seed ortholog is 73%.
Alternative seed ortholog is L0PDU8 (19 bits away from this cluster)

Group of orthologs #197. Best score 66 bits
Score difference with first non-orthologous sequence - C.aurantiacus:66 P.jiroveci:66

A9WCA0              	100.00%		L0PF23              	100.00%
A9WJS4              	20.13%		
Bootstrap support for A9WCA0 as seed ortholog is 100%.
Bootstrap support for L0PF23 as seed ortholog is 100%.

Group of orthologs #198. Best score 66 bits
Score difference with first non-orthologous sequence - C.aurantiacus:66 P.jiroveci:66

A9WG52              	100.00%		L0PAQ3              	100.00%
Bootstrap support for A9WG52 as seed ortholog is 100%.
Bootstrap support for L0PAQ3 as seed ortholog is 100%.

Group of orthologs #199. Best score 65 bits
Score difference with first non-orthologous sequence - C.aurantiacus:65 P.jiroveci:65

A9WBA7              	100.00%		L0PEF1              	100.00%
A9WD85              	12.72%		
Bootstrap support for A9WBA7 as seed ortholog is 100%.
Bootstrap support for L0PEF1 as seed ortholog is 100%.

Group of orthologs #200. Best score 64 bits
Score difference with first non-orthologous sequence - C.aurantiacus:1 P.jiroveci:64

A9WBD4              	100.00%		L0PDY2              	100.00%
A9WHX2              	5.31%		
Bootstrap support for A9WBD4 as seed ortholog is 53%.
Alternative seed ortholog is A9WEJ8 (1 bits away from this cluster)
Bootstrap support for L0PDY2 as seed ortholog is 100%.

Group of orthologs #201. Best score 64 bits
Score difference with first non-orthologous sequence - C.aurantiacus:64 P.jiroveci:64

A9WAG4              	100.00%		L0PB54              	100.00%
Bootstrap support for A9WAG4 as seed ortholog is 100%.
Bootstrap support for L0PB54 as seed ortholog is 100%.

Group of orthologs #202. Best score 64 bits
Score difference with first non-orthologous sequence - C.aurantiacus:64 P.jiroveci:20

A9WH61              	100.00%		L0P8D1              	100.00%
Bootstrap support for A9WH61 as seed ortholog is 100%.
Bootstrap support for L0P8D1 as seed ortholog is 72%.
Alternative seed ortholog is L0PFI8 (20 bits away from this cluster)

Group of orthologs #203. Best score 62 bits
Score difference with first non-orthologous sequence - C.aurantiacus:62 P.jiroveci:62

A9WFU3              	100.00%		L0PE02              	100.00%
Bootstrap support for A9WFU3 as seed ortholog is 100%.
Bootstrap support for L0PE02 as seed ortholog is 100%.

Group of orthologs #204. Best score 61 bits
Score difference with first non-orthologous sequence - C.aurantiacus:61 P.jiroveci:61

A9WBH2              	100.00%		L0PB28              	100.00%
A9WE60              	34.84%		
A9WFY3              	33.20%		
A9WBH6              	21.99%		
A9WBH7              	8.33%		
A9WJ08              	5.05%		
Bootstrap support for A9WBH2 as seed ortholog is 100%.
Bootstrap support for L0PB28 as seed ortholog is 100%.

Group of orthologs #205. Best score 61 bits
Score difference with first non-orthologous sequence - C.aurantiacus:61 P.jiroveci:61

A9WKC6              	100.00%		L0PEZ2              	100.00%
                    	       		L0PH30              	100.00%
Bootstrap support for A9WKC6 as seed ortholog is 100%.
Bootstrap support for L0PEZ2 as seed ortholog is 100%.
Bootstrap support for L0PH30 as seed ortholog is 100%.

Group of orthologs #206. Best score 61 bits
Score difference with first non-orthologous sequence - C.aurantiacus:61 P.jiroveci:61

A9WH94              	100.00%		L0P724              	100.00%
Bootstrap support for A9WH94 as seed ortholog is 100%.
Bootstrap support for L0P724 as seed ortholog is 100%.

Group of orthologs #207. Best score 60 bits
Score difference with first non-orthologous sequence - C.aurantiacus:60 P.jiroveci:60

A9WEG8              	100.00%		L0PFX1              	100.00%
Bootstrap support for A9WEG8 as seed ortholog is 100%.
Bootstrap support for L0PFX1 as seed ortholog is 100%.

Group of orthologs #208. Best score 59 bits
Score difference with first non-orthologous sequence - C.aurantiacus:59 P.jiroveci:59

A9WFP7              	100.00%		L0P8C5              	100.00%
                    	       		L0P7X3              	61.69%
Bootstrap support for A9WFP7 as seed ortholog is 100%.
Bootstrap support for L0P8C5 as seed ortholog is 100%.

Group of orthologs #209. Best score 59 bits
Score difference with first non-orthologous sequence - C.aurantiacus:59 P.jiroveci:59

A9W9Z0              	100.00%		L0PDW5              	100.00%
Bootstrap support for A9W9Z0 as seed ortholog is 100%.
Bootstrap support for L0PDW5 as seed ortholog is 100%.

Group of orthologs #210. Best score 58 bits
Score difference with first non-orthologous sequence - C.aurantiacus:58 P.jiroveci:58

A9WE19              	100.00%		L0PDS6              	100.00%
A9WJ67              	5.90%		
A9WI80              	5.90%		
Bootstrap support for A9WE19 as seed ortholog is 100%.
Bootstrap support for L0PDS6 as seed ortholog is 100%.

Group of orthologs #211. Best score 58 bits
Score difference with first non-orthologous sequence - C.aurantiacus:58 P.jiroveci:58

A9WJ33              	100.00%		L0P746              	100.00%
Bootstrap support for A9WJ33 as seed ortholog is 100%.
Bootstrap support for L0P746 as seed ortholog is 100%.

Group of orthologs #212. Best score 57 bits
Score difference with first non-orthologous sequence - C.aurantiacus:57 P.jiroveci:57

A9WAQ5              	100.00%		L0PG46              	100.00%
Bootstrap support for A9WAQ5 as seed ortholog is 100%.
Bootstrap support for L0PG46 as seed ortholog is 100%.

Group of orthologs #213. Best score 57 bits
Score difference with first non-orthologous sequence - C.aurantiacus:57 P.jiroveci:57

A9WH76              	100.00%		L0PCA8              	100.00%
Bootstrap support for A9WH76 as seed ortholog is 100%.
Bootstrap support for L0PCA8 as seed ortholog is 100%.

Group of orthologs #214. Best score 57 bits
Score difference with first non-orthologous sequence - C.aurantiacus:57 P.jiroveci:57

Q7M1B9              	100.00%		L0P9W7              	100.00%
Bootstrap support for Q7M1B9 as seed ortholog is 100%.
Bootstrap support for L0P9W7 as seed ortholog is 100%.

Group of orthologs #215. Best score 56 bits
Score difference with first non-orthologous sequence - C.aurantiacus:56 P.jiroveci:56

P80040              	100.00%		L0PE61              	100.00%
A9WBT6              	22.18%		
Bootstrap support for P80040 as seed ortholog is 100%.
Bootstrap support for L0PE61 as seed ortholog is 100%.

Group of orthologs #216. Best score 56 bits
Score difference with first non-orthologous sequence - C.aurantiacus:56 P.jiroveci:56

A9WEN2              	100.00%		L0P9J7              	100.00%
Bootstrap support for A9WEN2 as seed ortholog is 100%.
Bootstrap support for L0P9J7 as seed ortholog is 100%.

Group of orthologs #217. Best score 56 bits
Score difference with first non-orthologous sequence - C.aurantiacus:56 P.jiroveci:56

A9WH75              	100.00%		L0PBX7              	100.00%
Bootstrap support for A9WH75 as seed ortholog is 100%.
Bootstrap support for L0PBX7 as seed ortholog is 100%.

Group of orthologs #218. Best score 55 bits
Score difference with first non-orthologous sequence - C.aurantiacus:55 P.jiroveci:55

A9WEC0              	100.00%		L0PBS2              	100.00%
A9W9U4              	23.62%		
A9WDP7              	22.83%		
Bootstrap support for A9WEC0 as seed ortholog is 100%.
Bootstrap support for L0PBS2 as seed ortholog is 100%.

Group of orthologs #219. Best score 55 bits
Score difference with first non-orthologous sequence - C.aurantiacus:55 P.jiroveci:55

A9WJU4              	100.00%		L0PAR1              	100.00%
                    	       		L0PGD8              	6.79%
Bootstrap support for A9WJU4 as seed ortholog is 100%.
Bootstrap support for L0PAR1 as seed ortholog is 100%.

Group of orthologs #220. Best score 55 bits
Score difference with first non-orthologous sequence - C.aurantiacus:55 P.jiroveci:55

A9WH65              	100.00%		L0P9N4              	100.00%
Bootstrap support for A9WH65 as seed ortholog is 100%.
Bootstrap support for L0P9N4 as seed ortholog is 100%.

Group of orthologs #221. Best score 55 bits
Score difference with first non-orthologous sequence - C.aurantiacus:55 P.jiroveci:55

A9WJV9              	100.00%		L0PCP5              	100.00%
Bootstrap support for A9WJV9 as seed ortholog is 100%.
Bootstrap support for L0PCP5 as seed ortholog is 100%.

Group of orthologs #222. Best score 53 bits
Score difference with first non-orthologous sequence - C.aurantiacus:53 P.jiroveci:53

A9WCA5              	100.00%		L0P9T6              	100.00%
Bootstrap support for A9WCA5 as seed ortholog is 100%.
Bootstrap support for L0P9T6 as seed ortholog is 100%.

Group of orthologs #223. Best score 53 bits
Score difference with first non-orthologous sequence - C.aurantiacus:53 P.jiroveci:53

A9WGW1              	100.00%		L0PAH2              	100.00%
Bootstrap support for A9WGW1 as seed ortholog is 100%.
Bootstrap support for L0PAH2 as seed ortholog is 100%.

Group of orthologs #224. Best score 52 bits
Score difference with first non-orthologous sequence - C.aurantiacus:52 P.jiroveci:52

O52394              	100.00%		L0PDH7              	100.00%
                    	       		L0PFP2              	38.89%
Bootstrap support for O52394 as seed ortholog is 100%.
Bootstrap support for L0PDH7 as seed ortholog is 100%.

Group of orthologs #225. Best score 52 bits
Score difference with first non-orthologous sequence - C.aurantiacus:52 P.jiroveci:52

A9WJ49              	100.00%		L0PDC7              	100.00%
Bootstrap support for A9WJ49 as seed ortholog is 100%.
Bootstrap support for L0PDC7 as seed ortholog is 100%.

Group of orthologs #226. Best score 50 bits
Score difference with first non-orthologous sequence - C.aurantiacus:50 P.jiroveci:50

A9WCE6              	100.00%		L0PG86              	100.00%
A9W9X4              	14.53%		
A9WFK1              	8.38%		
Bootstrap support for A9WCE6 as seed ortholog is 100%.
Bootstrap support for L0PG86 as seed ortholog is 100%.

Group of orthologs #227. Best score 50 bits
Score difference with first non-orthologous sequence - C.aurantiacus:50 P.jiroveci:50

A9WGV8              	100.00%		L0P9B3              	100.00%
Bootstrap support for A9WGV8 as seed ortholog is 100%.
Bootstrap support for L0P9B3 as seed ortholog is 100%.

Group of orthologs #228. Best score 50 bits
Score difference with first non-orthologous sequence - C.aurantiacus:50 P.jiroveci:50

A9WC66              	100.00%		L0PF62              	100.00%
Bootstrap support for A9WC66 as seed ortholog is 100%.
Bootstrap support for L0PF62 as seed ortholog is 100%.

Group of orthologs #229. Best score 49 bits
Score difference with first non-orthologous sequence - C.aurantiacus:49 P.jiroveci:49

A9WAK1              	100.00%		L0PDT5              	100.00%
Bootstrap support for A9WAK1 as seed ortholog is 100%.
Bootstrap support for L0PDT5 as seed ortholog is 100%.

Group of orthologs #230. Best score 49 bits
Score difference with first non-orthologous sequence - C.aurantiacus:49 P.jiroveci:49

A9WGI3              	100.00%		L0PH23              	100.00%
Bootstrap support for A9WGI3 as seed ortholog is 100%.
Bootstrap support for L0PH23 as seed ortholog is 100%.

Group of orthologs #231. Best score 49 bits
Score difference with first non-orthologous sequence - C.aurantiacus:49 P.jiroveci:49

A9WJB9              	100.00%		L0PFT7              	100.00%
Bootstrap support for A9WJB9 as seed ortholog is 100%.
Bootstrap support for L0PFT7 as seed ortholog is 100%.

Group of orthologs #232. Best score 47 bits
Score difference with first non-orthologous sequence - C.aurantiacus:47 P.jiroveci:47

A9WJW4              	100.00%		L0PI13              	100.00%
A9WAB7              	24.32%		
A9WGY2              	15.70%		
Bootstrap support for A9WJW4 as seed ortholog is 100%.
Bootstrap support for L0PI13 as seed ortholog is 100%.

Group of orthologs #233. Best score 47 bits
Score difference with first non-orthologous sequence - C.aurantiacus:47 P.jiroveci:47

A9WF28              	100.00%		L0P7T2              	100.00%
Bootstrap support for A9WF28 as seed ortholog is 100%.
Bootstrap support for L0P7T2 as seed ortholog is 100%.

Group of orthologs #234. Best score 47 bits
Score difference with first non-orthologous sequence - C.aurantiacus:47 P.jiroveci:47

A9WH70              	100.00%		L0PAE8              	100.00%
Bootstrap support for A9WH70 as seed ortholog is 100%.
Bootstrap support for L0PAE8 as seed ortholog is 100%.

Group of orthologs #235. Best score 47 bits
Score difference with first non-orthologous sequence - C.aurantiacus:47 P.jiroveci:47

A9WGS3              	100.00%		L0PBK9              	100.00%
Bootstrap support for A9WGS3 as seed ortholog is 100%.
Bootstrap support for L0PBK9 as seed ortholog is 100%.

Group of orthologs #236. Best score 46 bits
Score difference with first non-orthologous sequence - C.aurantiacus:46 P.jiroveci:46

A9WK38              	100.00%		L0PFN8              	100.00%
Bootstrap support for A9WK38 as seed ortholog is 100%.
Bootstrap support for L0PFN8 as seed ortholog is 100%.

Group of orthologs #237. Best score 45 bits
Score difference with first non-orthologous sequence - C.aurantiacus:45 P.jiroveci:45

A9WC95              	100.00%		L0PC82              	100.00%
Bootstrap support for A9WC95 as seed ortholog is 100%.
Bootstrap support for L0PC82 as seed ortholog is 100%.

Group of orthologs #238. Best score 44 bits
Score difference with first non-orthologous sequence - C.aurantiacus:44 P.jiroveci:44

A9WH89              	100.00%		L0PA12              	100.00%
Bootstrap support for A9WH89 as seed ortholog is 100%.
Bootstrap support for L0PA12 as seed ortholog is 100%.

Group of orthologs #239. Best score 43 bits
Score difference with first non-orthologous sequence - C.aurantiacus:43 P.jiroveci:43

A9WFG7              	100.00%		L0PEI1              	100.00%
                    	       		L0PGT3              	12.50%
                    	       		L0PC59              	8.64%
                    	       		L0PGM0              	8.41%
                    	       		L0P9E4              	5.91%
Bootstrap support for A9WFG7 as seed ortholog is 100%.
Bootstrap support for L0PEI1 as seed ortholog is 100%.

Group of orthologs #240. Best score 42 bits
Score difference with first non-orthologous sequence - C.aurantiacus:42 P.jiroveci:42

A9WDT6              	100.00%		L0PD02              	100.00%
Bootstrap support for A9WDT6 as seed ortholog is 100%.
Bootstrap support for L0PD02 as seed ortholog is 100%.

Group of orthologs #241. Best score 41 bits
Score difference with first non-orthologous sequence - C.aurantiacus:41 P.jiroveci:41

A9WJP4              	100.00%		L0PFP4              	100.00%
A9WKB9              	12.01%		
Bootstrap support for A9WJP4 as seed ortholog is 100%.
Bootstrap support for L0PFP4 as seed ortholog is 100%.

Group of orthologs #242. Best score 40 bits
Score difference with first non-orthologous sequence - C.aurantiacus:40 P.jiroveci:40

A9WBP3              	100.00%		L0P9D6              	100.00%
A9WJZ6              	18.90%		
A9WJZ5              	18.74%		
A9WIY4              	17.95%		
A9WCH1              	17.17%		
A9WGI9              	14.02%		
A9WJC3              	11.81%		
A9WBA6              	11.65%		
A9WF18              	11.34%		
A9WA32              	7.87%		
A9WJI7              	7.56%		
A9WE26              	7.24%		
A9WBL8              	6.46%		
A9WJ72              	6.14%		
A9WF17              	5.98%		
A9WJZ3              	5.51%		
Bootstrap support for A9WBP3 as seed ortholog is 100%.
Bootstrap support for L0P9D6 as seed ortholog is 100%.

Group of orthologs #243. Best score 40 bits
Score difference with first non-orthologous sequence - C.aurantiacus:40 P.jiroveci:40

A9WCN2              	100.00%		L0PGH8              	100.00%
A9WJF6              	19.59%		L0P913              	10.15%
A9WJ85              	17.21%		
Bootstrap support for A9WCN2 as seed ortholog is 100%.
Bootstrap support for L0PGH8 as seed ortholog is 100%.

Group of orthologs #244. Best score 40 bits
Score difference with first non-orthologous sequence - C.aurantiacus:40 P.jiroveci:40

A9WH97              	100.00%		L0PGZ5              	100.00%
Bootstrap support for A9WH97 as seed ortholog is 100%.
Bootstrap support for L0PGZ5 as seed ortholog is 100%.