###################################
245 groups of orthologs
278 in-paralogs from B.thetaiotaomicron
267 in-paralogs from P.knowlesi
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1126 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:1126 P.knowlesi:1126

Q8AAB2              	100.00%		B3LBE1              	100.00%
Bootstrap support for Q8AAB2 as seed ortholog is 100%.
Bootstrap support for B3LBE1 as seed ortholog is 100%.

Group of orthologs #2. Best score 1075 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:1075 P.knowlesi:1075

Q8AAA8              	100.00%		B3LBP4              	100.00%
Q8A105              	35.84%		
Bootstrap support for Q8AAA8 as seed ortholog is 100%.
Bootstrap support for B3LBP4 as seed ortholog is 100%.

Group of orthologs #3. Best score 762 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:762 P.knowlesi:195

Q89YY3              	100.00%		B3L1E0              	100.00%
Bootstrap support for Q89YY3 as seed ortholog is 100%.
Bootstrap support for B3L1E0 as seed ortholog is 99%.

Group of orthologs #4. Best score 665 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:608 P.knowlesi:120

Q89YW6              	100.00%		B3L5E9              	100.00%
Bootstrap support for Q89YW6 as seed ortholog is 100%.
Bootstrap support for B3L5E9 as seed ortholog is 99%.

Group of orthologs #5. Best score 598 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:598 P.knowlesi:598

Q8A9V4              	100.00%		B3LD12              	100.00%
Bootstrap support for Q8A9V4 as seed ortholog is 100%.
Bootstrap support for B3LD12 as seed ortholog is 100%.

Group of orthologs #6. Best score 552 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:552 P.knowlesi:552

Q8AAB4              	100.00%		B3L4A4              	100.00%
Bootstrap support for Q8AAB4 as seed ortholog is 100%.
Bootstrap support for B3L4A4 as seed ortholog is 100%.

Group of orthologs #7. Best score 546 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:546 P.knowlesi:396

Q8A9K9              	100.00%		B3L8Q4              	100.00%
Bootstrap support for Q8A9K9 as seed ortholog is 100%.
Bootstrap support for B3L8Q4 as seed ortholog is 100%.

Group of orthologs #8. Best score 542 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:542 P.knowlesi:542

Q8A407              	100.00%		B3L654              	100.00%
Bootstrap support for Q8A407 as seed ortholog is 100%.
Bootstrap support for B3L654 as seed ortholog is 100%.

Group of orthologs #9. Best score 535 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:535 P.knowlesi:535

Q8A5I3              	100.00%		B3L2U4              	100.00%
Bootstrap support for Q8A5I3 as seed ortholog is 100%.
Bootstrap support for B3L2U4 as seed ortholog is 100%.

Group of orthologs #10. Best score 532 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:532 P.knowlesi:178

Q8A6P8              	100.00%		B3L3U9              	100.00%
Bootstrap support for Q8A6P8 as seed ortholog is 100%.
Bootstrap support for B3L3U9 as seed ortholog is 99%.

Group of orthologs #11. Best score 530 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:530 P.knowlesi:285

Q8A849              	100.00%		B3L8R5              	100.00%
Bootstrap support for Q8A849 as seed ortholog is 100%.
Bootstrap support for B3L8R5 as seed ortholog is 100%.

Group of orthologs #12. Best score 498 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:498 P.knowlesi:498

Q8A9U7              	100.00%		B3L0I2              	100.00%
Bootstrap support for Q8A9U7 as seed ortholog is 100%.
Bootstrap support for B3L0I2 as seed ortholog is 100%.

Group of orthologs #13. Best score 492 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:492 P.knowlesi:492

P94598              	100.00%		B3LA84              	100.00%
Q8A6B2              	33.90%		B3LAJ5              	16.83%
Bootstrap support for P94598 as seed ortholog is 100%.
Bootstrap support for B3LA84 as seed ortholog is 100%.

Group of orthologs #14. Best score 483 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:483 P.knowlesi:483

Q8A0M6              	100.00%		B3L6U2              	100.00%
Bootstrap support for Q8A0M6 as seed ortholog is 100%.
Bootstrap support for B3L6U2 as seed ortholog is 100%.

Group of orthologs #15. Best score 478 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:478 P.knowlesi:107

Q8A0L4              	100.00%		B3L4Z9              	100.00%
Bootstrap support for Q8A0L4 as seed ortholog is 100%.
Bootstrap support for B3L4Z9 as seed ortholog is 99%.

Group of orthologs #16. Best score 476 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:476 P.knowlesi:32

Q8A294              	100.00%		B3L9J7              	100.00%
Bootstrap support for Q8A294 as seed ortholog is 100%.
Bootstrap support for B3L9J7 as seed ortholog is 74%.
Alternative seed ortholog is B3LD07 (32 bits away from this cluster)

Group of orthologs #17. Best score 472 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:300 P.knowlesi:2

Q8A474              	100.00%		B3L839              	100.00%
Bootstrap support for Q8A474 as seed ortholog is 100%.
Bootstrap support for B3L839 as seed ortholog is 49%.
Alternative seed ortholog is B3LCX4 (2 bits away from this cluster)

Group of orthologs #18. Best score 467 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:467 P.knowlesi:368

Q8A463              	100.00%		B3L8S5              	100.00%
Bootstrap support for Q8A463 as seed ortholog is 100%.
Bootstrap support for B3L8S5 as seed ortholog is 100%.

Group of orthologs #19. Best score 460 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:460 P.knowlesi:321

Q89ZM4              	100.00%		B3L9E5              	100.00%
Bootstrap support for Q89ZM4 as seed ortholog is 100%.
Bootstrap support for B3L9E5 as seed ortholog is 99%.

Group of orthologs #20. Best score 448 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:255 P.knowlesi:448

Q8A277              	100.00%		B3LD45              	100.00%
Bootstrap support for Q8A277 as seed ortholog is 99%.
Bootstrap support for B3LD45 as seed ortholog is 100%.

Group of orthologs #21. Best score 443 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:443 P.knowlesi:291

Q8AA33              	100.00%		B3L3C9              	100.00%
Bootstrap support for Q8AA33 as seed ortholog is 100%.
Bootstrap support for B3L3C9 as seed ortholog is 100%.

Group of orthologs #22. Best score 439 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:439 P.knowlesi:439

Q8A2N7              	100.00%		B3LD81              	100.00%
Bootstrap support for Q8A2N7 as seed ortholog is 100%.
Bootstrap support for B3LD81 as seed ortholog is 100%.

Group of orthologs #23. Best score 434 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:434 P.knowlesi:91

Q8A0Z8              	100.00%		B3L0N7              	100.00%
Bootstrap support for Q8A0Z8 as seed ortholog is 100%.
Bootstrap support for B3L0N7 as seed ortholog is 97%.

Group of orthologs #24. Best score 433 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:433 P.knowlesi:433

Q8A329              	100.00%		B3L108              	100.00%
Bootstrap support for Q8A329 as seed ortholog is 100%.
Bootstrap support for B3L108 as seed ortholog is 100%.

Group of orthologs #25. Best score 425 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:425 P.knowlesi:425

Q8AAP2              	100.00%		B3L565              	100.00%
Bootstrap support for Q8AAP2 as seed ortholog is 100%.
Bootstrap support for B3L565 as seed ortholog is 100%.

Group of orthologs #26. Best score 411 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:112 P.knowlesi:411

Q89ZV6              	100.00%		B3L3R6              	100.00%
Bootstrap support for Q89ZV6 as seed ortholog is 99%.
Bootstrap support for B3L3R6 as seed ortholog is 100%.

Group of orthologs #27. Best score 409 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:409 P.knowlesi:409

Q89Z05              	100.00%		B3L3V4              	100.00%
Bootstrap support for Q89Z05 as seed ortholog is 100%.
Bootstrap support for B3L3V4 as seed ortholog is 100%.

Group of orthologs #28. Best score 409 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:409 P.knowlesi:409

Q8A8E5              	100.00%		B3L9M2              	100.00%
Bootstrap support for Q8A8E5 as seed ortholog is 100%.
Bootstrap support for B3L9M2 as seed ortholog is 100%.

Group of orthologs #29. Best score 405 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:405 P.knowlesi:405

Q8A4T0              	100.00%		B3L1Y7              	100.00%
Bootstrap support for Q8A4T0 as seed ortholog is 100%.
Bootstrap support for B3L1Y7 as seed ortholog is 100%.

Group of orthologs #30. Best score 396 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:396 P.knowlesi:396

Q89ZV8              	100.00%		B3L9D3              	100.00%
Bootstrap support for Q89ZV8 as seed ortholog is 100%.
Bootstrap support for B3L9D3 as seed ortholog is 100%.

Group of orthologs #31. Best score 380 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:380 P.knowlesi:380

Q8A414              	100.00%		B3L8H1              	100.00%
Bootstrap support for Q8A414 as seed ortholog is 100%.
Bootstrap support for B3L8H1 as seed ortholog is 100%.

Group of orthologs #32. Best score 378 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:313 P.knowlesi:208

Q8A417              	100.00%		B3LC50              	100.00%
Bootstrap support for Q8A417 as seed ortholog is 100%.
Bootstrap support for B3LC50 as seed ortholog is 100%.

Group of orthologs #33. Best score 366 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:366 P.knowlesi:366

Q8AAB1              	100.00%		B3L212              	100.00%
Bootstrap support for Q8AAB1 as seed ortholog is 100%.
Bootstrap support for B3L212 as seed ortholog is 100%.

Group of orthologs #34. Best score 366 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:292 P.knowlesi:366

Q8A8E3              	100.00%		B3LC69              	100.00%
Bootstrap support for Q8A8E3 as seed ortholog is 100%.
Bootstrap support for B3LC69 as seed ortholog is 100%.

Group of orthologs #35. Best score 364 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:73 P.knowlesi:243

Q8A4Q6              	100.00%		B3KZL1              	100.00%
Bootstrap support for Q8A4Q6 as seed ortholog is 87%.
Bootstrap support for B3KZL1 as seed ortholog is 99%.

Group of orthologs #36. Best score 361 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:361 P.knowlesi:287

Q8A988              	100.00%		B3LCD4              	100.00%
Bootstrap support for Q8A988 as seed ortholog is 100%.
Bootstrap support for B3LCD4 as seed ortholog is 100%.

Group of orthologs #37. Best score 355 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:308 P.knowlesi:355

Q8A100              	100.00%		B3L0T5              	100.00%
Bootstrap support for Q8A100 as seed ortholog is 100%.
Bootstrap support for B3L0T5 as seed ortholog is 100%.

Group of orthologs #38. Best score 350 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:350 P.knowlesi:350

Q8AAW5              	100.00%		B3L7U8              	100.00%
Bootstrap support for Q8AAW5 as seed ortholog is 100%.
Bootstrap support for B3L7U8 as seed ortholog is 100%.

Group of orthologs #39. Best score 348 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:348 P.knowlesi:348

Q8A2T6              	100.00%		B3L2N9              	100.00%
Bootstrap support for Q8A2T6 as seed ortholog is 100%.
Bootstrap support for B3L2N9 as seed ortholog is 100%.

Group of orthologs #40. Best score 348 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:348 P.knowlesi:348

Q8A2E7              	100.00%		B3L7E4              	100.00%
Bootstrap support for Q8A2E7 as seed ortholog is 100%.
Bootstrap support for B3L7E4 as seed ortholog is 100%.

Group of orthologs #41. Best score 343 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:343 P.knowlesi:343

Q8A5W4              	100.00%		B3L892              	100.00%
Bootstrap support for Q8A5W4 as seed ortholog is 100%.
Bootstrap support for B3L892 as seed ortholog is 100%.

Group of orthologs #42. Best score 339 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:339 P.knowlesi:339

Q8A875              	100.00%		B3LBT4              	100.00%
Bootstrap support for Q8A875 as seed ortholog is 100%.
Bootstrap support for B3LBT4 as seed ortholog is 100%.

Group of orthologs #43. Best score 336 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:336 P.knowlesi:336

Q8A753              	100.00%		B3L2P2              	100.00%
Bootstrap support for Q8A753 as seed ortholog is 100%.
Bootstrap support for B3L2P2 as seed ortholog is 100%.

Group of orthologs #44. Best score 321 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:321 P.knowlesi:321

Q8A9B6              	100.00%		B3LCM1              	100.00%
Bootstrap support for Q8A9B6 as seed ortholog is 100%.
Bootstrap support for B3LCM1 as seed ortholog is 100%.

Group of orthologs #45. Best score 305 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:305 P.knowlesi:305

Q8AA75              	100.00%		B3LAR4              	100.00%
Bootstrap support for Q8AA75 as seed ortholog is 100%.
Bootstrap support for B3LAR4 as seed ortholog is 100%.

Group of orthologs #46. Best score 293 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:293 P.knowlesi:293

Q8A6N4              	100.00%		B3L781              	100.00%
Bootstrap support for Q8A6N4 as seed ortholog is 100%.
Bootstrap support for B3L781 as seed ortholog is 100%.

Group of orthologs #47. Best score 291 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:291 P.knowlesi:291

Q8A470              	100.00%		B3L428              	100.00%
                    	       		B3L8U1              	10.39%
Bootstrap support for Q8A470 as seed ortholog is 100%.
Bootstrap support for B3L428 as seed ortholog is 100%.

Group of orthologs #48. Best score 289 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:289 P.knowlesi:289

Q8A126              	100.00%		B3L2M5              	100.00%
Bootstrap support for Q8A126 as seed ortholog is 100%.
Bootstrap support for B3L2M5 as seed ortholog is 100%.

Group of orthologs #49. Best score 288 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:288 P.knowlesi:288

Q8A9S7              	100.00%		B3LD11              	100.00%
Bootstrap support for Q8A9S7 as seed ortholog is 100%.
Bootstrap support for B3LD11 as seed ortholog is 100%.

Group of orthologs #50. Best score 287 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:287 P.knowlesi:88

Q8A3W3              	100.00%		B3L7D9              	100.00%
Bootstrap support for Q8A3W3 as seed ortholog is 100%.
Bootstrap support for B3L7D9 as seed ortholog is 98%.

Group of orthologs #51. Best score 287 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:287 P.knowlesi:210

Q8A135              	100.00%		B3LCG7              	100.00%
Bootstrap support for Q8A135 as seed ortholog is 100%.
Bootstrap support for B3LCG7 as seed ortholog is 100%.

Group of orthologs #52. Best score 285 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:285 P.knowlesi:285

Q8A339              	100.00%		B3L0B3              	100.00%
Bootstrap support for Q8A339 as seed ortholog is 100%.
Bootstrap support for B3L0B3 as seed ortholog is 100%.

Group of orthologs #53. Best score 285 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:285 P.knowlesi:285

Q8A460              	100.00%		B3L9M5              	100.00%
Bootstrap support for Q8A460 as seed ortholog is 100%.
Bootstrap support for B3L9M5 as seed ortholog is 100%.

Group of orthologs #54. Best score 284 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:284 P.knowlesi:284

Q89YT0              	100.00%		B3L8Q7              	100.00%
Bootstrap support for Q89YT0 as seed ortholog is 100%.
Bootstrap support for B3L8Q7 as seed ortholog is 100%.

Group of orthologs #55. Best score 280 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:280 P.knowlesi:280

Q8A9M8              	100.00%		B3L4N7              	100.00%
Bootstrap support for Q8A9M8 as seed ortholog is 100%.
Bootstrap support for B3L4N7 as seed ortholog is 100%.

Group of orthologs #56. Best score 277 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:277 P.knowlesi:277

Q8A8R2              	100.00%		B3L504              	100.00%
Q8A765              	44.07%		
Bootstrap support for Q8A8R2 as seed ortholog is 100%.
Bootstrap support for B3L504 as seed ortholog is 100%.

Group of orthologs #57. Best score 276 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:276 P.knowlesi:59

Q8A6M9              	100.00%		B3LA92              	100.00%
Q8A127              	17.40%		
Bootstrap support for Q8A6M9 as seed ortholog is 100%.
Bootstrap support for B3LA92 as seed ortholog is 85%.

Group of orthologs #58. Best score 272 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:272 P.knowlesi:14

Q8A6J6              	100.00%		B3LCR1              	100.00%
Bootstrap support for Q8A6J6 as seed ortholog is 100%.
Bootstrap support for B3LCR1 as seed ortholog is 60%.
Alternative seed ortholog is B3L0G9 (14 bits away from this cluster)

Group of orthologs #59. Best score 271 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:271 P.knowlesi:271

Q8A8S6              	100.00%		B3L359              	100.00%
Bootstrap support for Q8A8S6 as seed ortholog is 100%.
Bootstrap support for B3L359 as seed ortholog is 100%.

Group of orthologs #60. Best score 270 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:270 P.knowlesi:45

Q8A2F2              	100.00%		B3L193              	100.00%
Bootstrap support for Q8A2F2 as seed ortholog is 100%.
Bootstrap support for B3L193 as seed ortholog is 84%.

Group of orthologs #61. Best score 269 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:269 P.knowlesi:269

Q8A7H6              	100.00%		B3L3R5              	100.00%
Bootstrap support for Q8A7H6 as seed ortholog is 100%.
Bootstrap support for B3L3R5 as seed ortholog is 100%.

Group of orthologs #62. Best score 268 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:268 P.knowlesi:268

Q8A469              	100.00%		B3L0J5              	100.00%
                    	       		B3LB54              	16.25%
                    	       		B3L5F6              	6.88%
Bootstrap support for Q8A469 as seed ortholog is 100%.
Bootstrap support for B3L0J5 as seed ortholog is 100%.

Group of orthologs #63. Best score 267 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:267 P.knowlesi:267

Q8A684              	100.00%		B3L986              	100.00%
Bootstrap support for Q8A684 as seed ortholog is 100%.
Bootstrap support for B3L986 as seed ortholog is 100%.

Group of orthologs #64. Best score 258 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:258 P.knowlesi:115

Q8A9R8              	100.00%		B3L274              	100.00%
Bootstrap support for Q8A9R8 as seed ortholog is 100%.
Bootstrap support for B3L274 as seed ortholog is 99%.

Group of orthologs #65. Best score 258 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:258 P.knowlesi:258

Q8A3N0              	100.00%		B3LBB6              	100.00%
Bootstrap support for Q8A3N0 as seed ortholog is 100%.
Bootstrap support for B3LBB6 as seed ortholog is 100%.

Group of orthologs #66. Best score 251 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:251 P.knowlesi:23

Q8A334              	100.00%		B3L6L5              	100.00%
Bootstrap support for Q8A334 as seed ortholog is 100%.
Bootstrap support for B3L6L5 as seed ortholog is 83%.

Group of orthologs #67. Best score 249 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:249 P.knowlesi:249

Q8A876              	100.00%		B3KZZ1              	100.00%
Bootstrap support for Q8A876 as seed ortholog is 100%.
Bootstrap support for B3KZZ1 as seed ortholog is 100%.

Group of orthologs #68. Best score 246 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:246 P.knowlesi:246

Q8A378              	100.00%		B3L729              	100.00%
Bootstrap support for Q8A378 as seed ortholog is 100%.
Bootstrap support for B3L729 as seed ortholog is 100%.

Group of orthologs #69. Best score 242 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:110 P.knowlesi:242

Q8A7C3              	100.00%		B3L9R6              	100.00%
Bootstrap support for Q8A7C3 as seed ortholog is 99%.
Bootstrap support for B3L9R6 as seed ortholog is 100%.

Group of orthologs #70. Best score 241 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:241 P.knowlesi:241

Q8A029              	100.00%		B3L8F2              	100.00%
Bootstrap support for Q8A029 as seed ortholog is 100%.
Bootstrap support for B3L8F2 as seed ortholog is 100%.

Group of orthologs #71. Best score 240 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:62 P.knowlesi:240

Q8A2X1              	100.00%		B3L2B2              	100.00%
Bootstrap support for Q8A2X1 as seed ortholog is 91%.
Bootstrap support for B3L2B2 as seed ortholog is 100%.

Group of orthologs #72. Best score 240 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:240 P.knowlesi:240

Q8A9M7              	100.00%		B3LA75              	100.00%
Bootstrap support for Q8A9M7 as seed ortholog is 100%.
Bootstrap support for B3LA75 as seed ortholog is 100%.

Group of orthologs #73. Best score 237 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:237 P.knowlesi:237

Q8A9S3              	100.00%		B3L8F0              	100.00%
Bootstrap support for Q8A9S3 as seed ortholog is 100%.
Bootstrap support for B3L8F0 as seed ortholog is 100%.

Group of orthologs #74. Best score 233 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:171 P.knowlesi:233

Q8A298              	100.00%		B3LAN0              	100.00%
Bootstrap support for Q8A298 as seed ortholog is 100%.
Bootstrap support for B3LAN0 as seed ortholog is 100%.

Group of orthologs #75. Best score 233 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:233 P.knowlesi:106

Q8A9R7              	100.00%		B3L8Y4              	100.00%
Bootstrap support for Q8A9R7 as seed ortholog is 100%.
Bootstrap support for B3L8Y4 as seed ortholog is 99%.

Group of orthologs #76. Best score 232 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:232 P.knowlesi:17

Q8A9I4              	100.00%		B3LCA3              	100.00%
Bootstrap support for Q8A9I4 as seed ortholog is 100%.
Bootstrap support for B3LCA3 as seed ortholog is 65%.
Alternative seed ortholog is B3L971 (17 bits away from this cluster)

Group of orthologs #77. Best score 231 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:231 P.knowlesi:231

Q8A8E6              	100.00%		B3L9N1              	100.00%
Bootstrap support for Q8A8E6 as seed ortholog is 100%.
Bootstrap support for B3L9N1 as seed ortholog is 100%.

Group of orthologs #78. Best score 228 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:228 P.knowlesi:228

Q8A455              	100.00%		B3L752              	100.00%
Bootstrap support for Q8A455 as seed ortholog is 100%.
Bootstrap support for B3L752 as seed ortholog is 100%.

Group of orthologs #79. Best score 222 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:34 P.knowlesi:46

Q8A158              	100.00%		B3L520              	100.00%
Q8A651              	100.00%		
Q8A8C5              	5.29%		
Q8A8I1              	5.06%		
Bootstrap support for Q8A158 as seed ortholog is 79%.
Bootstrap support for Q8A651 as seed ortholog is 77%.
Bootstrap support for B3L520 as seed ortholog is 98%.

Group of orthologs #80. Best score 220 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:37 P.knowlesi:66

Q8A2W9              	100.00%		B3LCW5              	100.00%
Q8AB03              	45.13%		
Bootstrap support for Q8A2W9 as seed ortholog is 79%.
Bootstrap support for B3LCW5 as seed ortholog is 89%.

Group of orthologs #81. Best score 218 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:119 P.knowlesi:218

Q8A0W0              	100.00%		B3L7M3              	100.00%
                    	       		B3L8Y6              	9.16%
Bootstrap support for Q8A0W0 as seed ortholog is 99%.
Bootstrap support for B3L7M3 as seed ortholog is 100%.

Group of orthologs #82. Best score 216 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:216 P.knowlesi:216

Q8A1P8              	100.00%		B3LAH4              	100.00%
Bootstrap support for Q8A1P8 as seed ortholog is 100%.
Bootstrap support for B3LAH4 as seed ortholog is 100%.

Group of orthologs #83. Best score 215 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:215 P.knowlesi:215

Q8A9B8              	100.00%		B3LCL1              	100.00%
                    	       		B3L9X8              	14.94%
                    	       		B3L4Y5              	8.69%
Bootstrap support for Q8A9B8 as seed ortholog is 100%.
Bootstrap support for B3LCL1 as seed ortholog is 100%.

Group of orthologs #84. Best score 215 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:215 P.knowlesi:215

Q8A2F4              	100.00%		B3L3U5              	100.00%
Bootstrap support for Q8A2F4 as seed ortholog is 100%.
Bootstrap support for B3L3U5 as seed ortholog is 100%.

Group of orthologs #85. Best score 212 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:212 P.knowlesi:56

Q8A9I0              	100.00%		B3LD63              	100.00%
Bootstrap support for Q8A9I0 as seed ortholog is 100%.
Bootstrap support for B3LD63 as seed ortholog is 86%.

Group of orthologs #86. Best score 210 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:210 P.knowlesi:210

Q8A296              	100.00%		B3L056              	100.00%
Bootstrap support for Q8A296 as seed ortholog is 100%.
Bootstrap support for B3L056 as seed ortholog is 100%.

Group of orthologs #87. Best score 210 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:210 P.knowlesi:91

Q8A2A1              	100.00%		B3L119              	100.00%
Bootstrap support for Q8A2A1 as seed ortholog is 100%.
Bootstrap support for B3L119 as seed ortholog is 95%.

Group of orthologs #88. Best score 209 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:65 P.knowlesi:142

Q8A195              	100.00%		B3L2P6              	100.00%
Bootstrap support for Q8A195 as seed ortholog is 99%.
Bootstrap support for B3L2P6 as seed ortholog is 100%.

Group of orthologs #89. Best score 209 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:209 P.knowlesi:105

Q8A479              	100.00%		B3L5D5              	100.00%
Bootstrap support for Q8A479 as seed ortholog is 100%.
Bootstrap support for B3L5D5 as seed ortholog is 99%.

Group of orthologs #90. Best score 205 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:19 P.knowlesi:28

Q8A9E5              	100.00%		B3LDA2              	100.00%
Bootstrap support for Q8A9E5 as seed ortholog is 71%.
Alternative seed ortholog is Q8A7T1 (19 bits away from this cluster)
Bootstrap support for B3LDA2 as seed ortholog is 77%.

Group of orthologs #91. Best score 202 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:202 P.knowlesi:202

Q8A5V6              	100.00%		B3LAL0              	100.00%
Bootstrap support for Q8A5V6 as seed ortholog is 100%.
Bootstrap support for B3LAL0 as seed ortholog is 100%.

Group of orthologs #92. Best score 199 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:199 P.knowlesi:199

Q8A137              	100.00%		B3L0P1              	100.00%
Q8ABI8              	76.13%		
Bootstrap support for Q8A137 as seed ortholog is 100%.
Bootstrap support for B3L0P1 as seed ortholog is 100%.

Group of orthologs #93. Best score 199 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:26 P.knowlesi:34

Q8A8C3              	100.00%		B3L024              	100.00%
Bootstrap support for Q8A8C3 as seed ortholog is 99%.
Bootstrap support for B3L024 as seed ortholog is 85%.

Group of orthologs #94. Best score 199 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:199 P.knowlesi:199

Q8A602              	100.00%		B3L7H9              	100.00%
Bootstrap support for Q8A602 as seed ortholog is 100%.
Bootstrap support for B3L7H9 as seed ortholog is 100%.

Group of orthologs #95. Best score 198 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:198 P.knowlesi:198

Q8A0C2              	100.00%		B3L8L9              	100.00%
Q8A7X1              	9.35%		
Bootstrap support for Q8A0C2 as seed ortholog is 100%.
Bootstrap support for B3L8L9 as seed ortholog is 100%.

Group of orthologs #96. Best score 196 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:37 P.knowlesi:6

Q8AA27              	100.00%		B3L3U6              	100.00%
Bootstrap support for Q8AA27 as seed ortholog is 88%.
Bootstrap support for B3L3U6 as seed ortholog is 57%.
Alternative seed ortholog is B3L5Y8 (6 bits away from this cluster)

Group of orthologs #97. Best score 195 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:195 P.knowlesi:77

Q8AB01              	100.00%		B3LC21              	100.00%
Bootstrap support for Q8AB01 as seed ortholog is 100%.
Bootstrap support for B3LC21 as seed ortholog is 99%.

Group of orthologs #98. Best score 194 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:194 P.knowlesi:194

Q8A613              	100.00%		B3L4L9              	100.00%
Bootstrap support for Q8A613 as seed ortholog is 100%.
Bootstrap support for B3L4L9 as seed ortholog is 100%.

Group of orthologs #99. Best score 190 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:68 P.knowlesi:190

Q8A1V8              	100.00%		B3LCZ9              	100.00%
                    	       		B3L611              	10.26%
Bootstrap support for Q8A1V8 as seed ortholog is 93%.
Bootstrap support for B3LCZ9 as seed ortholog is 100%.

Group of orthologs #100. Best score 188 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:188 P.knowlesi:84

Q8A0U2              	100.00%		B3LA18              	100.00%
Bootstrap support for Q8A0U2 as seed ortholog is 100%.
Bootstrap support for B3LA18 as seed ortholog is 99%.

Group of orthologs #101. Best score 187 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:187 P.knowlesi:187

Q8AAP9              	100.00%		B3L753              	100.00%
                    	       		B3L538              	15.31%
Bootstrap support for Q8AAP9 as seed ortholog is 100%.
Bootstrap support for B3L753 as seed ortholog is 100%.

Group of orthologs #102. Best score 182 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:182 P.knowlesi:39

Q89ZT6              	100.00%		B3L873              	100.00%
Bootstrap support for Q89ZT6 as seed ortholog is 100%.
Bootstrap support for B3L873 as seed ortholog is 46%.
Alternative seed ortholog is B3LB86 (39 bits away from this cluster)

Group of orthologs #103. Best score 180 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:180 P.knowlesi:31

Q89ZR4              	100.00%		B3LCF4              	100.00%
Bootstrap support for Q89ZR4 as seed ortholog is 100%.
Bootstrap support for B3LCF4 as seed ortholog is 75%.

Group of orthologs #104. Best score 178 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:178 P.knowlesi:178

Q8AA10              	100.00%		B3LC58              	100.00%
                    	       		B3L7H4              	13.89%
Bootstrap support for Q8AA10 as seed ortholog is 100%.
Bootstrap support for B3LC58 as seed ortholog is 100%.

Group of orthologs #105. Best score 176 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:72 P.knowlesi:176

Q8A1B1              	100.00%		B3L7C9              	100.00%
Bootstrap support for Q8A1B1 as seed ortholog is 92%.
Bootstrap support for B3L7C9 as seed ortholog is 100%.

Group of orthologs #106. Best score 175 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:175 P.knowlesi:175

Q8A614              	100.00%		B3L8H8              	100.00%
Bootstrap support for Q8A614 as seed ortholog is 100%.
Bootstrap support for B3L8H8 as seed ortholog is 100%.

Group of orthologs #107. Best score 173 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:173 P.knowlesi:173

Q89ZI9              	100.00%		B3L148              	100.00%
Bootstrap support for Q89ZI9 as seed ortholog is 100%.
Bootstrap support for B3L148 as seed ortholog is 100%.

Group of orthologs #108. Best score 172 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:32 P.knowlesi:172

Q8A1A8              	100.00%		B3L7W8              	100.00%
Bootstrap support for Q8A1A8 as seed ortholog is 73%.
Alternative seed ortholog is Q8A7T2 (32 bits away from this cluster)
Bootstrap support for B3L7W8 as seed ortholog is 100%.

Group of orthologs #109. Best score 171 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:171 P.knowlesi:171

Q8AAF7              	100.00%		B3L4H4              	100.00%
Q8AAF6              	12.56%		
Q8A2B9              	10.79%		
Bootstrap support for Q8AAF7 as seed ortholog is 100%.
Bootstrap support for B3L4H4 as seed ortholog is 100%.

Group of orthologs #110. Best score 164 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:164 P.knowlesi:164

Q89ZP5              	100.00%		B3L9R1              	100.00%
Bootstrap support for Q89ZP5 as seed ortholog is 100%.
Bootstrap support for B3L9R1 as seed ortholog is 100%.

Group of orthologs #111. Best score 163 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:163 P.knowlesi:163

Q8A8G2              	100.00%		B3L4S8              	100.00%
Bootstrap support for Q8A8G2 as seed ortholog is 100%.
Bootstrap support for B3L4S8 as seed ortholog is 100%.

Group of orthologs #112. Best score 159 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:159 P.knowlesi:19

Q8A0X6              	100.00%		B3L594              	100.00%
Bootstrap support for Q8A0X6 as seed ortholog is 100%.
Bootstrap support for B3L594 as seed ortholog is 64%.
Alternative seed ortholog is B3L3C0 (19 bits away from this cluster)

Group of orthologs #113. Best score 159 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:159 P.knowlesi:159

Q8A9M6              	100.00%		B3LBT5              	100.00%
Bootstrap support for Q8A9M6 as seed ortholog is 100%.
Bootstrap support for B3LBT5 as seed ortholog is 100%.

Group of orthologs #114. Best score 158 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:158 P.knowlesi:158

Q8A2W0              	100.00%		B3L7I7              	100.00%
Q8A5T5              	5.36%		
Bootstrap support for Q8A2W0 as seed ortholog is 100%.
Bootstrap support for B3L7I7 as seed ortholog is 100%.

Group of orthologs #115. Best score 157 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:157 P.knowlesi:157

Q89ZI0              	100.00%		B3L0V4              	100.00%
Q8A9M1              	20.58%		
Q8AAM8              	17.17%		
Q8A1Q3              	16.12%		
Bootstrap support for Q89ZI0 as seed ortholog is 100%.
Bootstrap support for B3L0V4 as seed ortholog is 100%.

Group of orthologs #116. Best score 156 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:156 P.knowlesi:156

Q8A2S5              	100.00%		B3L4X8              	100.00%
Bootstrap support for Q8A2S5 as seed ortholog is 100%.
Bootstrap support for B3L4X8 as seed ortholog is 100%.

Group of orthologs #117. Best score 153 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:153 P.knowlesi:153

Q8A3M1              	100.00%		B3L2B7              	100.00%
                    	       		B3L3I0              	6.78%
Bootstrap support for Q8A3M1 as seed ortholog is 100%.
Bootstrap support for B3L2B7 as seed ortholog is 100%.

Group of orthologs #118. Best score 153 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:153 P.knowlesi:56

Q8A7R9              	100.00%		B3LCK9              	100.00%
Bootstrap support for Q8A7R9 as seed ortholog is 100%.
Bootstrap support for B3LCK9 as seed ortholog is 84%.

Group of orthologs #119. Best score 149 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:149 P.knowlesi:149

Q8AA08              	100.00%		B3L6C4              	100.00%
Bootstrap support for Q8AA08 as seed ortholog is 100%.
Bootstrap support for B3L6C4 as seed ortholog is 100%.

Group of orthologs #120. Best score 148 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:96 P.knowlesi:148

Q8A908              	100.00%		B3L830              	100.00%
Bootstrap support for Q8A908 as seed ortholog is 99%.
Bootstrap support for B3L830 as seed ortholog is 100%.

Group of orthologs #121. Best score 147 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:147 P.knowlesi:74

Q8A2J7              	100.00%		B3L310              	100.00%
Bootstrap support for Q8A2J7 as seed ortholog is 100%.
Bootstrap support for B3L310 as seed ortholog is 98%.

Group of orthologs #122. Best score 140 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:140 P.knowlesi:7

Q8A011              	100.00%		B3L2Z9              	100.00%
Bootstrap support for Q8A011 as seed ortholog is 100%.
Bootstrap support for B3L2Z9 as seed ortholog is 40%.
Alternative seed ortholog is B3LAA5 (7 bits away from this cluster)

Group of orthologs #123. Best score 139 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:139 P.knowlesi:139

Q8A7J8              	100.00%		B3L6F2              	100.00%
Bootstrap support for Q8A7J8 as seed ortholog is 100%.
Bootstrap support for B3L6F2 as seed ortholog is 100%.

Group of orthologs #124. Best score 137 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:137 P.knowlesi:84

Q8A005              	100.00%		B3L0V2              	100.00%
Bootstrap support for Q8A005 as seed ortholog is 100%.
Bootstrap support for B3L0V2 as seed ortholog is 99%.

Group of orthologs #125. Best score 137 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:137 P.knowlesi:137

Q8A0S5              	100.00%		B3LCI8              	100.00%
Bootstrap support for Q8A0S5 as seed ortholog is 100%.
Bootstrap support for B3LCI8 as seed ortholog is 100%.

Group of orthologs #126. Best score 135 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:135 P.knowlesi:135

Q8A7M6              	100.00%		B3L5A3              	100.00%
Bootstrap support for Q8A7M6 as seed ortholog is 100%.
Bootstrap support for B3L5A3 as seed ortholog is 100%.

Group of orthologs #127. Best score 133 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:133 P.knowlesi:133

Q89ZK5              	100.00%		B3LAU1              	100.00%
Bootstrap support for Q89ZK5 as seed ortholog is 100%.
Bootstrap support for B3LAU1 as seed ortholog is 100%.

Group of orthologs #128. Best score 133 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:133 P.knowlesi:21

Q8A997              	100.00%		B3L268              	100.00%
Bootstrap support for Q8A997 as seed ortholog is 100%.
Bootstrap support for B3L268 as seed ortholog is 82%.

Group of orthologs #129. Best score 133 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:133 P.knowlesi:133

Q8AAG6              	100.00%		B3LC53              	100.00%
Bootstrap support for Q8AAG6 as seed ortholog is 100%.
Bootstrap support for B3LC53 as seed ortholog is 100%.

Group of orthologs #130. Best score 132 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:132 P.knowlesi:132

Q89Z26              	100.00%		B3L1D4              	100.00%
Bootstrap support for Q89Z26 as seed ortholog is 100%.
Bootstrap support for B3L1D4 as seed ortholog is 100%.

Group of orthologs #131. Best score 132 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:74 P.knowlesi:61

Q8A1V6              	100.00%		B3KYZ6              	100.00%
Bootstrap support for Q8A1V6 as seed ortholog is 97%.
Bootstrap support for B3KYZ6 as seed ortholog is 93%.

Group of orthologs #132. Best score 130 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:130 P.knowlesi:130

Q89YZ6              	100.00%		B3L6W6              	100.00%
Bootstrap support for Q89YZ6 as seed ortholog is 100%.
Bootstrap support for B3L6W6 as seed ortholog is 100%.

Group of orthologs #133. Best score 130 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:130 P.knowlesi:130

Q8A9E3              	100.00%		B3KZP7              	100.00%
Bootstrap support for Q8A9E3 as seed ortholog is 100%.
Bootstrap support for B3KZP7 as seed ortholog is 100%.

Group of orthologs #134. Best score 129 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:129 P.knowlesi:129

Q8A640              	100.00%		B3L7W2              	100.00%
Q8A560              	16.35%		
Q8A0P3              	14.60%		
Bootstrap support for Q8A640 as seed ortholog is 100%.
Bootstrap support for B3L7W2 as seed ortholog is 100%.

Group of orthologs #135. Best score 129 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:129 P.knowlesi:129

Q8A5I1              	100.00%		B3L4T6              	100.00%
Bootstrap support for Q8A5I1 as seed ortholog is 100%.
Bootstrap support for B3L4T6 as seed ortholog is 100%.

Group of orthologs #136. Best score 129 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:50 P.knowlesi:129

Q8AB60              	100.00%		B3L5M0              	100.00%
Bootstrap support for Q8AB60 as seed ortholog is 95%.
Bootstrap support for B3L5M0 as seed ortholog is 100%.

Group of orthologs #137. Best score 128 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:128 P.knowlesi:128

Q8A251              	100.00%		B3LD22              	100.00%
Bootstrap support for Q8A251 as seed ortholog is 100%.
Bootstrap support for B3LD22 as seed ortholog is 100%.

Group of orthologs #138. Best score 124 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:124 P.knowlesi:124

Q8A2X4              	100.00%		B3L945              	100.00%
Bootstrap support for Q8A2X4 as seed ortholog is 100%.
Bootstrap support for B3L945 as seed ortholog is 100%.

Group of orthologs #139. Best score 123 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:123 P.knowlesi:123

Q8A749              	100.00%		B3LBV1              	100.00%
Bootstrap support for Q8A749 as seed ortholog is 100%.
Bootstrap support for B3LBV1 as seed ortholog is 100%.

Group of orthologs #140. Best score 121 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:38 P.knowlesi:121

Q8AAI8              	100.00%		B3LAG9              	100.00%
Bootstrap support for Q8AAI8 as seed ortholog is 88%.
Bootstrap support for B3LAG9 as seed ortholog is 100%.

Group of orthologs #141. Best score 119 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:119 P.knowlesi:119

Q8AAP4              	100.00%		B3L389              	100.00%
Bootstrap support for Q8AAP4 as seed ortholog is 100%.
Bootstrap support for B3L389 as seed ortholog is 100%.

Group of orthologs #142. Best score 119 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:119 P.knowlesi:119

Q8A9M5              	100.00%		B3L660              	100.00%
Bootstrap support for Q8A9M5 as seed ortholog is 100%.
Bootstrap support for B3L660 as seed ortholog is 100%.

Group of orthologs #143. Best score 118 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:118 P.knowlesi:118

Q8A3X5              	100.00%		B3LCI0              	100.00%
Bootstrap support for Q8A3X5 as seed ortholog is 100%.
Bootstrap support for B3LCI0 as seed ortholog is 100%.

Group of orthologs #144. Best score 117 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:117 P.knowlesi:20

Q89ZJ0              	100.00%		B3L3M8              	100.00%
Bootstrap support for Q89ZJ0 as seed ortholog is 100%.
Bootstrap support for B3L3M8 as seed ortholog is 83%.

Group of orthologs #145. Best score 117 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:117 P.knowlesi:117

Q8ABF5              	100.00%		B3L1V6              	100.00%
Bootstrap support for Q8ABF5 as seed ortholog is 100%.
Bootstrap support for B3L1V6 as seed ortholog is 100%.

Group of orthologs #146. Best score 116 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:116 P.knowlesi:116

Q8A625              	100.00%		B3KZN0              	100.00%
Bootstrap support for Q8A625 as seed ortholog is 100%.
Bootstrap support for B3KZN0 as seed ortholog is 100%.

Group of orthologs #147. Best score 116 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:116 P.knowlesi:116

Q8A0U6              	100.00%		B3L6V5              	100.00%
Bootstrap support for Q8A0U6 as seed ortholog is 100%.
Bootstrap support for B3L6V5 as seed ortholog is 100%.

Group of orthologs #148. Best score 116 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:70 P.knowlesi:116

Q8A8E2              	100.00%		B3L3T0              	100.00%
Bootstrap support for Q8A8E2 as seed ortholog is 96%.
Bootstrap support for B3L3T0 as seed ortholog is 100%.

Group of orthologs #149. Best score 116 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:116 P.knowlesi:116

Q8AA36              	100.00%		B3L625              	100.00%
Bootstrap support for Q8AA36 as seed ortholog is 100%.
Bootstrap support for B3L625 as seed ortholog is 100%.

Group of orthologs #150. Best score 114 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:114 P.knowlesi:114

Q8A5Z7              	100.00%		B3L8C2              	100.00%
Q8A5B5              	20.58%		
Q8ABK5              	20.28%		
Q8A4F5              	10.63%		
Bootstrap support for Q8A5Z7 as seed ortholog is 100%.
Bootstrap support for B3L8C2 as seed ortholog is 100%.

Group of orthologs #151. Best score 113 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:113 P.knowlesi:113

Q8A1A9              	100.00%		B3L745              	100.00%
Q8A6I2              	37.14%		
Bootstrap support for Q8A1A9 as seed ortholog is 100%.
Bootstrap support for B3L745 as seed ortholog is 100%.

Group of orthologs #152. Best score 113 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:52 P.knowlesi:113

Q89ZF4              	100.00%		B3L878              	100.00%
Bootstrap support for Q89ZF4 as seed ortholog is 86%.
Bootstrap support for B3L878 as seed ortholog is 100%.

Group of orthologs #153. Best score 111 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:111 P.knowlesi:111

Q8A136              	100.00%		B3LBD6              	100.00%
Bootstrap support for Q8A136 as seed ortholog is 100%.
Bootstrap support for B3LBD6 as seed ortholog is 100%.

Group of orthologs #154. Best score 109 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:109 P.knowlesi:109

Q89ZN1              	100.00%		B3L0C6              	100.00%
Bootstrap support for Q89ZN1 as seed ortholog is 100%.
Bootstrap support for B3L0C6 as seed ortholog is 100%.

Group of orthologs #155. Best score 108 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:108 P.knowlesi:108

Q8A5W3              	100.00%		B3L4U8              	100.00%
                    	       		B3LCF6              	31.26%
Bootstrap support for Q8A5W3 as seed ortholog is 100%.
Bootstrap support for B3L4U8 as seed ortholog is 100%.

Group of orthologs #156. Best score 108 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:108 P.knowlesi:31

Q8A476              	100.00%		B3L2K0              	100.00%
Bootstrap support for Q8A476 as seed ortholog is 100%.
Bootstrap support for B3L2K0 as seed ortholog is 87%.

Group of orthologs #157. Best score 107 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:50 P.knowlesi:37

Q8A3Z2              	100.00%		B3LA28              	100.00%
                    	       		B3LCE5              	37.50%
Bootstrap support for Q8A3Z2 as seed ortholog is 96%.
Bootstrap support for B3LA28 as seed ortholog is 90%.

Group of orthologs #158. Best score 107 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:107 P.knowlesi:107

Q8A7I7              	100.00%		B3L2G8              	100.00%
Bootstrap support for Q8A7I7 as seed ortholog is 100%.
Bootstrap support for B3L2G8 as seed ortholog is 100%.

Group of orthologs #159. Best score 106 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:106 P.knowlesi:106

Q8A165              	100.00%		B3L4W6              	100.00%
                    	       		B3L5X6              	21.90%
Bootstrap support for Q8A165 as seed ortholog is 100%.
Bootstrap support for B3L4W6 as seed ortholog is 100%.

Group of orthologs #160. Best score 106 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:106 P.knowlesi:106

Q8A677              	100.00%		B3L2W0              	100.00%
Bootstrap support for Q8A677 as seed ortholog is 100%.
Bootstrap support for B3L2W0 as seed ortholog is 100%.

Group of orthologs #161. Best score 105 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:52 P.knowlesi:105

Q8A2P2              	100.00%		B3L1X5              	100.00%
Bootstrap support for Q8A2P2 as seed ortholog is 96%.
Bootstrap support for B3L1X5 as seed ortholog is 100%.

Group of orthologs #162. Best score 103 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:103 P.knowlesi:103

Q8A2P0              	100.00%		B3L4N5              	100.00%
Bootstrap support for Q8A2P0 as seed ortholog is 100%.
Bootstrap support for B3L4N5 as seed ortholog is 100%.

Group of orthologs #163. Best score 103 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:103 P.knowlesi:103

Q8A699              	100.00%		B3L6C0              	100.00%
Bootstrap support for Q8A699 as seed ortholog is 100%.
Bootstrap support for B3L6C0 as seed ortholog is 100%.

Group of orthologs #164. Best score 102 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:102 P.knowlesi:102

Q8A807              	100.00%		B3LD29              	100.00%
Bootstrap support for Q8A807 as seed ortholog is 100%.
Bootstrap support for B3LD29 as seed ortholog is 100%.

Group of orthologs #165. Best score 101 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:24 P.knowlesi:101

Q89YN2              	100.00%		B3L297              	100.00%
Q8A2F3              	22.49%		
Bootstrap support for Q89YN2 as seed ortholog is 73%.
Alternative seed ortholog is Q8A090 (24 bits away from this cluster)
Bootstrap support for B3L297 as seed ortholog is 100%.

Group of orthologs #166. Best score 100 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:100 P.knowlesi:100

Q8A3H9              	100.00%		B3L8U3              	100.00%
Bootstrap support for Q8A3H9 as seed ortholog is 100%.
Bootstrap support for B3L8U3 as seed ortholog is 100%.

Group of orthologs #167. Best score 98 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:98 P.knowlesi:98

Q8A0Q0              	100.00%		B3L9U0              	100.00%
                    	       		B3LBA8              	85.20%
Bootstrap support for Q8A0Q0 as seed ortholog is 100%.
Bootstrap support for B3L9U0 as seed ortholog is 100%.

Group of orthologs #168. Best score 98 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:98 P.knowlesi:98

Q8A630              	100.00%		B3KZF5              	100.00%
Bootstrap support for Q8A630 as seed ortholog is 100%.
Bootstrap support for B3KZF5 as seed ortholog is 100%.

Group of orthologs #169. Best score 97 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:97 P.knowlesi:97

Q8A0Y7              	100.00%		B3L0R0              	100.00%
Bootstrap support for Q8A0Y7 as seed ortholog is 100%.
Bootstrap support for B3L0R0 as seed ortholog is 100%.

Group of orthologs #170. Best score 97 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:97 P.knowlesi:4

Q8A0H8              	100.00%		B3LAK2              	100.00%
Bootstrap support for Q8A0H8 as seed ortholog is 100%.
Bootstrap support for B3LAK2 as seed ortholog is 92%.

Group of orthologs #171. Best score 97 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:97 P.knowlesi:97

Q8A4C4              	100.00%		B3L6X5              	100.00%
Bootstrap support for Q8A4C4 as seed ortholog is 100%.
Bootstrap support for B3L6X5 as seed ortholog is 100%.

Group of orthologs #172. Best score 97 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:97 P.knowlesi:6

Q8A756              	100.00%		B3L826              	100.00%
Bootstrap support for Q8A756 as seed ortholog is 100%.
Bootstrap support for B3L826 as seed ortholog is 53%.
Alternative seed ortholog is B3KZH9 (6 bits away from this cluster)

Group of orthologs #173. Best score 97 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:97 P.knowlesi:97

Q8A9U6              	100.00%		B3LBS5              	100.00%
Bootstrap support for Q8A9U6 as seed ortholog is 100%.
Bootstrap support for B3LBS5 as seed ortholog is 100%.

Group of orthologs #174. Best score 96 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:96 P.knowlesi:96

Q8A382              	100.00%		B3LAS6              	100.00%
Bootstrap support for Q8A382 as seed ortholog is 100%.
Bootstrap support for B3LAS6 as seed ortholog is 100%.

Group of orthologs #175. Best score 95 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:95 P.knowlesi:95

Q8A6N7              	100.00%		B3L314              	100.00%
Bootstrap support for Q8A6N7 as seed ortholog is 100%.
Bootstrap support for B3L314 as seed ortholog is 100%.

Group of orthologs #176. Best score 92 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:92 P.knowlesi:46

Q89ZY4              	100.00%		B3L6A5              	100.00%
Bootstrap support for Q89ZY4 as seed ortholog is 100%.
Bootstrap support for B3L6A5 as seed ortholog is 84%.

Group of orthologs #177. Best score 91 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:91 P.knowlesi:91

Q8A466              	100.00%		B3LB88              	100.00%
Bootstrap support for Q8A466 as seed ortholog is 100%.
Bootstrap support for B3LB88 as seed ortholog is 100%.

Group of orthologs #178. Best score 90 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:90 P.knowlesi:90

Q8A8T4              	100.00%		B3L6D1              	100.00%
Bootstrap support for Q8A8T4 as seed ortholog is 100%.
Bootstrap support for B3L6D1 as seed ortholog is 100%.

Group of orthologs #179. Best score 89 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:89 P.knowlesi:89

Q8A3X0              	100.00%		B3L8M1              	100.00%
Q89ZV9              	40.99%		
Bootstrap support for Q8A3X0 as seed ortholog is 100%.
Bootstrap support for B3L8M1 as seed ortholog is 100%.

Group of orthologs #180. Best score 89 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:89 P.knowlesi:89

Q8A1E0              	100.00%		B3L125              	100.00%
Bootstrap support for Q8A1E0 as seed ortholog is 100%.
Bootstrap support for B3L125 as seed ortholog is 100%.

Group of orthologs #181. Best score 89 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:89 P.knowlesi:89

Q8AA81              	100.00%		B3LAJ7              	100.00%
Bootstrap support for Q8AA81 as seed ortholog is 100%.
Bootstrap support for B3LAJ7 as seed ortholog is 100%.

Group of orthologs #182. Best score 89 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:89 P.knowlesi:89

Q8AB02              	100.00%		B3LBW0              	100.00%
Bootstrap support for Q8AB02 as seed ortholog is 100%.
Bootstrap support for B3LBW0 as seed ortholog is 100%.

Group of orthologs #183. Best score 88 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:20 P.knowlesi:88

Q8A3L8              	100.00%		B3L287              	100.00%
Bootstrap support for Q8A3L8 as seed ortholog is 71%.
Alternative seed ortholog is Q89ZS2 (20 bits away from this cluster)
Bootstrap support for B3L287 as seed ortholog is 100%.

Group of orthologs #184. Best score 88 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:46 P.knowlesi:88

Q8A0U9              	100.00%		B3L7D2              	100.00%
Bootstrap support for Q8A0U9 as seed ortholog is 94%.
Bootstrap support for B3L7D2 as seed ortholog is 100%.

Group of orthologs #185. Best score 87 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:87 P.knowlesi:87

Q8A012              	100.00%		B3L1Z3              	100.00%
Bootstrap support for Q8A012 as seed ortholog is 100%.
Bootstrap support for B3L1Z3 as seed ortholog is 100%.

Group of orthologs #186. Best score 87 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:87 P.knowlesi:87

Q8A018              	100.00%		B3LB63              	100.00%
Bootstrap support for Q8A018 as seed ortholog is 100%.
Bootstrap support for B3LB63 as seed ortholog is 100%.

Group of orthologs #187. Best score 87 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:87 P.knowlesi:87

Q8A517              	100.00%		B3L7G9              	100.00%
Bootstrap support for Q8A517 as seed ortholog is 100%.
Bootstrap support for B3L7G9 as seed ortholog is 100%.

Group of orthologs #188. Best score 86 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:86 P.knowlesi:86

Q89Z19              	100.00%		B3L7S7              	100.00%
Bootstrap support for Q89Z19 as seed ortholog is 100%.
Bootstrap support for B3L7S7 as seed ortholog is 100%.

Group of orthologs #189. Best score 86 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:86 P.knowlesi:29

Q8A107              	100.00%		B3LDG2              	100.00%
Bootstrap support for Q8A107 as seed ortholog is 100%.
Bootstrap support for B3LDG2 as seed ortholog is 74%.
Alternative seed ortholog is B3KZ67 (29 bits away from this cluster)

Group of orthologs #190. Best score 83 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:83 P.knowlesi:83

Q8A878              	100.00%		B3KZ79              	100.00%
Bootstrap support for Q8A878 as seed ortholog is 100%.
Bootstrap support for B3KZ79 as seed ortholog is 100%.

Group of orthologs #191. Best score 80 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:80 P.knowlesi:80

Q8A7B5              	100.00%		B3L1L0              	100.00%
                    	       		B3L992              	100.00%
                    	       		B3L9C8              	20.20%
                    	       		B3L0H3              	20.03%
Bootstrap support for Q8A7B5 as seed ortholog is 100%.
Bootstrap support for B3L1L0 as seed ortholog is 100%.
Bootstrap support for B3L992 as seed ortholog is 100%.

Group of orthologs #192. Best score 77 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:20 P.knowlesi:16

Q8A5L0              	100.00%		B3L9J3              	100.00%
Bootstrap support for Q8A5L0 as seed ortholog is 88%.
Bootstrap support for B3L9J3 as seed ortholog is 84%.

Group of orthologs #193. Best score 76 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:76 P.knowlesi:76

Q8A2E6              	100.00%		B3L0R8              	100.00%
Bootstrap support for Q8A2E6 as seed ortholog is 100%.
Bootstrap support for B3L0R8 as seed ortholog is 100%.

Group of orthologs #194. Best score 76 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:33 P.knowlesi:24

Q8A620              	100.00%		B3L7E6              	100.00%
Bootstrap support for Q8A620 as seed ortholog is 85%.
Bootstrap support for B3L7E6 as seed ortholog is 77%.

Group of orthologs #195. Best score 75 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:75 P.knowlesi:75

Q8A4S8              	100.00%		B3L5D7              	100.00%
Bootstrap support for Q8A4S8 as seed ortholog is 100%.
Bootstrap support for B3L5D7 as seed ortholog is 100%.

Group of orthologs #196. Best score 75 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:75 P.knowlesi:75

Q8A5W2              	100.00%		B3LBD4              	100.00%
Bootstrap support for Q8A5W2 as seed ortholog is 100%.
Bootstrap support for B3LBD4 as seed ortholog is 100%.

Group of orthologs #197. Best score 74 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:74 P.knowlesi:74

Q8A9N0              	100.00%		B3L2P3              	100.00%
Bootstrap support for Q8A9N0 as seed ortholog is 100%.
Bootstrap support for B3L2P3 as seed ortholog is 100%.

Group of orthologs #198. Best score 72 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:72 P.knowlesi:72

Q8A842              	100.00%		B3L2L4              	100.00%
Bootstrap support for Q8A842 as seed ortholog is 100%.
Bootstrap support for B3L2L4 as seed ortholog is 100%.

Group of orthologs #199. Best score 72 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:72 P.knowlesi:72

Q8A644              	100.00%		B3LCU7              	100.00%
Bootstrap support for Q8A644 as seed ortholog is 100%.
Bootstrap support for B3LCU7 as seed ortholog is 100%.

Group of orthologs #200. Best score 71 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:71 P.knowlesi:6

Q8A486              	100.00%		B3L8R4              	100.00%
Bootstrap support for Q8A486 as seed ortholog is 100%.
Bootstrap support for B3L8R4 as seed ortholog is 62%.
Alternative seed ortholog is B3L674 (6 bits away from this cluster)

Group of orthologs #201. Best score 70 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:70 P.knowlesi:70

Q8AAP3              	100.00%		B3LBF1              	100.00%
Bootstrap support for Q8AAP3 as seed ortholog is 100%.
Bootstrap support for B3LBF1 as seed ortholog is 100%.

Group of orthologs #202. Best score 69 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:69 P.knowlesi:69

Q8A0Z6              	100.00%		B3L0K9              	100.00%
Bootstrap support for Q8A0Z6 as seed ortholog is 100%.
Bootstrap support for B3L0K9 as seed ortholog is 100%.

Group of orthologs #203. Best score 69 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:69 P.knowlesi:69

Q8A493              	100.00%		B3L9U8              	100.00%
Bootstrap support for Q8A493 as seed ortholog is 100%.
Bootstrap support for B3L9U8 as seed ortholog is 100%.

Group of orthologs #204. Best score 69 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:69 P.knowlesi:9

Q8AAA3              	100.00%		B3LAC7              	100.00%
Bootstrap support for Q8AAA3 as seed ortholog is 100%.
Bootstrap support for B3LAC7 as seed ortholog is 59%.
Alternative seed ortholog is B3L6T7 (9 bits away from this cluster)

Group of orthologs #205. Best score 68 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:68 P.knowlesi:68

Q8AA35              	100.00%		B3L4E0              	100.00%
Bootstrap support for Q8AA35 as seed ortholog is 100%.
Bootstrap support for B3L4E0 as seed ortholog is 100%.

Group of orthologs #206. Best score 67 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:67 P.knowlesi:67

Q8A465              	100.00%		B3L4Q8              	100.00%
Bootstrap support for Q8A465 as seed ortholog is 100%.
Bootstrap support for B3L4Q8 as seed ortholog is 100%.

Group of orthologs #207. Best score 66 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:66 P.knowlesi:66

Q8A675              	100.00%		B3L8V7              	100.00%
Bootstrap support for Q8A675 as seed ortholog is 100%.
Bootstrap support for B3L8V7 as seed ortholog is 100%.

Group of orthologs #208. Best score 65 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:65 P.knowlesi:65

Q8A4A3              	100.00%		B3L638              	100.00%
Bootstrap support for Q8A4A3 as seed ortholog is 100%.
Bootstrap support for B3L638 as seed ortholog is 100%.

Group of orthologs #209. Best score 64 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:8 P.knowlesi:64

Q8A868              	100.00%		B3LBF4              	100.00%
Q8A1N2              	7.83%		
Q8A5Y6              	5.42%		
Bootstrap support for Q8A868 as seed ortholog is 59%.
Alternative seed ortholog is Q89ZQ8 (8 bits away from this cluster)
Bootstrap support for B3LBF4 as seed ortholog is 100%.

Group of orthologs #210. Best score 64 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:11 P.knowlesi:64

Q8A033              	100.00%		B3L7Q3              	100.00%
Bootstrap support for Q8A033 as seed ortholog is 60%.
Alternative seed ortholog is Q8A6H3 (11 bits away from this cluster)
Bootstrap support for B3L7Q3 as seed ortholog is 100%.

Group of orthologs #211. Best score 63 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:63 P.knowlesi:63

Q8A0Z3              	100.00%		B3L4F0              	100.00%
Bootstrap support for Q8A0Z3 as seed ortholog is 100%.
Bootstrap support for B3L4F0 as seed ortholog is 100%.

Group of orthologs #212. Best score 62 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:62 P.knowlesi:62

Q8A628              	100.00%		B3L593              	100.00%
Q8A2P4              	8.98%		
Bootstrap support for Q8A628 as seed ortholog is 100%.
Bootstrap support for B3L593 as seed ortholog is 100%.

Group of orthologs #213. Best score 62 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:62 P.knowlesi:62

Q8AAA0              	100.00%		B3LBK6              	100.00%
Q8A8R3              	64.12%		
Bootstrap support for Q8AAA0 as seed ortholog is 100%.
Bootstrap support for B3LBK6 as seed ortholog is 100%.

Group of orthologs #214. Best score 61 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:61 P.knowlesi:61

Q89ZJ1              	100.00%		B3L3R4              	100.00%
Bootstrap support for Q89ZJ1 as seed ortholog is 100%.
Bootstrap support for B3L3R4 as seed ortholog is 100%.

Group of orthologs #215. Best score 61 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:61 P.knowlesi:61

Q8A3D7              	100.00%		B3L2J8              	100.00%
Bootstrap support for Q8A3D7 as seed ortholog is 100%.
Bootstrap support for B3L2J8 as seed ortholog is 100%.

Group of orthologs #216. Best score 61 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:61 P.knowlesi:61

Q8A4A0              	100.00%		B3L6A6              	100.00%
Bootstrap support for Q8A4A0 as seed ortholog is 100%.
Bootstrap support for B3L6A6 as seed ortholog is 100%.

Group of orthologs #217. Best score 61 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:61 P.knowlesi:61

Q8A8C4              	100.00%		B3L551              	100.00%
Bootstrap support for Q8A8C4 as seed ortholog is 100%.
Bootstrap support for B3L551 as seed ortholog is 100%.

Group of orthologs #218. Best score 61 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:61 P.knowlesi:61

Q8AAN9              	100.00%		B3LA36              	100.00%
Bootstrap support for Q8AAN9 as seed ortholog is 100%.
Bootstrap support for B3LA36 as seed ortholog is 100%.

Group of orthologs #219. Best score 60 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:60 P.knowlesi:60

Q89YL3              	100.00%		B3L5D6              	100.00%
Bootstrap support for Q89YL3 as seed ortholog is 100%.
Bootstrap support for B3L5D6 as seed ortholog is 100%.

Group of orthologs #220. Best score 59 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:59 P.knowlesi:59

Q8AB68              	100.00%		B3L9X4              	100.00%
Bootstrap support for Q8AB68 as seed ortholog is 100%.
Bootstrap support for B3L9X4 as seed ortholog is 100%.

Group of orthologs #221. Best score 57 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:57 P.knowlesi:57

Q8A327              	100.00%		B3L098              	100.00%
Bootstrap support for Q8A327 as seed ortholog is 100%.
Bootstrap support for B3L098 as seed ortholog is 100%.

Group of orthologs #222. Best score 57 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:57 P.knowlesi:57

Q8A489              	100.00%		B3L5I3              	100.00%
Bootstrap support for Q8A489 as seed ortholog is 100%.
Bootstrap support for B3L5I3 as seed ortholog is 100%.

Group of orthologs #223. Best score 57 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:57 P.knowlesi:57

Q8A6P7              	100.00%		B3LCE8              	100.00%
Bootstrap support for Q8A6P7 as seed ortholog is 100%.
Bootstrap support for B3LCE8 as seed ortholog is 100%.

Group of orthologs #224. Best score 56 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:56 P.knowlesi:56

Q8A8M1              	100.00%		B3KZZ3              	100.00%
                    	       		B3LB42              	16.57%
Bootstrap support for Q8A8M1 as seed ortholog is 100%.
Bootstrap support for B3KZZ3 as seed ortholog is 100%.

Group of orthologs #225. Best score 55 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:55 P.knowlesi:55

Q89Z22              	100.00%		B3L0Z7              	100.00%
                    	       		B3L3U0              	42.11%
Bootstrap support for Q89Z22 as seed ortholog is 100%.
Bootstrap support for B3L0Z7 as seed ortholog is 100%.

Group of orthologs #226. Best score 55 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:55 P.knowlesi:55

Q8A499              	100.00%		B3L567              	100.00%
Bootstrap support for Q8A499 as seed ortholog is 100%.
Bootstrap support for B3L567 as seed ortholog is 100%.

Group of orthologs #227. Best score 54 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:54 P.knowlesi:54

Q8A0Z5              	100.00%		B3LC68              	100.00%
Bootstrap support for Q8A0Z5 as seed ortholog is 100%.
Bootstrap support for B3LC68 as seed ortholog is 100%.

Group of orthologs #228. Best score 52 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:52 P.knowlesi:52

Q8A3X3              	100.00%		B3L4U2              	100.00%
Q8A3X2              	5.34%		B3L110              	16.87%
Bootstrap support for Q8A3X3 as seed ortholog is 100%.
Bootstrap support for B3L4U2 as seed ortholog is 100%.

Group of orthologs #229. Best score 52 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:52 P.knowlesi:52

Q8A475              	100.00%		B3L3G6              	100.00%
Bootstrap support for Q8A475 as seed ortholog is 100%.
Bootstrap support for B3L3G6 as seed ortholog is 100%.

Group of orthologs #230. Best score 51 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:51 P.knowlesi:51

Q8A2Z0              	100.00%		B3L269              	100.00%
Q89Z64              	6.98%		
Bootstrap support for Q8A2Z0 as seed ortholog is 100%.
Bootstrap support for B3L269 as seed ortholog is 100%.

Group of orthologs #231. Best score 50 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:50 P.knowlesi:50

Q8A472              	100.00%		B3L4C7              	100.00%
Bootstrap support for Q8A472 as seed ortholog is 100%.
Bootstrap support for B3L4C7 as seed ortholog is 100%.

Group of orthologs #232. Best score 49 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:49 P.knowlesi:49

Q8A4A1              	100.00%		B3L665              	100.00%
Bootstrap support for Q8A4A1 as seed ortholog is 100%.
Bootstrap support for B3L665 as seed ortholog is 100%.

Group of orthologs #233. Best score 48 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:48 P.knowlesi:48

Q8A618              	100.00%		B3L5G8              	100.00%
Bootstrap support for Q8A618 as seed ortholog is 100%.
Bootstrap support for B3L5G8 as seed ortholog is 100%.

Group of orthologs #234. Best score 47 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:47 P.knowlesi:47

Q8A293              	100.00%		B3L7H0              	100.00%
Bootstrap support for Q8A293 as seed ortholog is 100%.
Bootstrap support for B3L7H0 as seed ortholog is 100%.

Group of orthologs #235. Best score 46 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:46 P.knowlesi:6

Q8A6J4              	100.00%		B3LC22              	100.00%
Q8A9N1              	100.00%		
Q8A131              	64.96%		
Bootstrap support for Q8A6J4 as seed ortholog is 100%.
Bootstrap support for Q8A9N1 as seed ortholog is 100%.
Bootstrap support for B3LC22 as seed ortholog is 69%.
Alternative seed ortholog is B3L7P7 (6 bits away from this cluster)

Group of orthologs #236. Best score 46 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:46 P.knowlesi:46

Q8A3W1              	100.00%		B3LBQ0              	100.00%
Q8A4G5              	11.38%		
Bootstrap support for Q8A3W1 as seed ortholog is 100%.
Bootstrap support for B3LBQ0 as seed ortholog is 100%.

Group of orthologs #237. Best score 46 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:46 P.knowlesi:46

Q8A0Z4              	100.00%		B3L230              	100.00%
Bootstrap support for Q8A0Z4 as seed ortholog is 100%.
Bootstrap support for B3L230 as seed ortholog is 100%.

Group of orthologs #238. Best score 46 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:46 P.knowlesi:46

Q8A0P9              	100.00%		B3L8A2              	100.00%
Bootstrap support for Q8A0P9 as seed ortholog is 100%.
Bootstrap support for B3L8A2 as seed ortholog is 100%.

Group of orthologs #239. Best score 44 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:44 P.knowlesi:44

Q8A5K1              	100.00%		B3L231              	100.00%
                    	       		B3L9G5              	9.81%
Bootstrap support for Q8A5K1 as seed ortholog is 100%.
Bootstrap support for B3L231 as seed ortholog is 100%.

Group of orthologs #240. Best score 44 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:44 P.knowlesi:44

Q8A2H9              	100.00%		B3L2K5              	100.00%
Bootstrap support for Q8A2H9 as seed ortholog is 100%.
Bootstrap support for B3L2K5 as seed ortholog is 100%.

Group of orthologs #241. Best score 44 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:44 P.knowlesi:44

Q8A9C7              	100.00%		B3L6D2              	100.00%
Bootstrap support for Q8A9C7 as seed ortholog is 100%.
Bootstrap support for B3L6D2 as seed ortholog is 100%.

Group of orthologs #242. Best score 44 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:44 P.knowlesi:44

Q8A480              	100.00%		B3LBZ3              	100.00%
Bootstrap support for Q8A480 as seed ortholog is 100%.
Bootstrap support for B3LBZ3 as seed ortholog is 100%.

Group of orthologs #243. Best score 42 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:42 P.knowlesi:42

Q8A488              	100.00%		B3L086              	100.00%
Bootstrap support for Q8A488 as seed ortholog is 100%.
Bootstrap support for B3L086 as seed ortholog is 100%.

Group of orthologs #244. Best score 42 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:42 P.knowlesi:42

Q8AB61              	100.00%		B3L928              	100.00%
Bootstrap support for Q8AB61 as seed ortholog is 100%.
Bootstrap support for B3L928 as seed ortholog is 100%.

Group of orthologs #245. Best score 40 bits
Score difference with first non-orthologous sequence - B.thetaiotaomicron:40 P.knowlesi:40

Q8A473              	100.00%		B3L0A6              	100.00%
Bootstrap support for Q8A473 as seed ortholog is 100%.
Bootstrap support for B3L0A6 as seed ortholog is 100%.