###################################
209 groups of orthologs
434 in-paralogs from B.taurus
216 in-paralogs from C.trachomatis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 928 bits
Score difference with first non-orthologous sequence - B.taurus:639 C.trachomatis:928

A7MBC5              	100.00%		O84022              	100.00%
Bootstrap support for A7MBC5 as seed ortholog is 100%.
Bootstrap support for O84022 as seed ortholog is 100%.

Group of orthologs #2. Best score 869 bits
Score difference with first non-orthologous sequence - B.taurus:869 C.trachomatis:869

Q3B7M9              	100.00%		O84250              	100.00%
P79334              	68.48%		
Q0VCM4              	61.98%		
Bootstrap support for Q3B7M9 as seed ortholog is 100%.
Bootstrap support for O84250 as seed ortholog is 100%.

Group of orthologs #3. Best score 715 bits
Score difference with first non-orthologous sequence - B.taurus:155 C.trachomatis:715

Q3ZCH0              	100.00%		P17821              	100.00%
Bootstrap support for Q3ZCH0 as seed ortholog is 99%.
Bootstrap support for P17821 as seed ortholog is 100%.

Group of orthologs #4. Best score 710 bits
Score difference with first non-orthologous sequence - B.taurus:250 C.trachomatis:710

Q59HJ6              	100.00%		O84348              	100.00%
Bootstrap support for Q59HJ6 as seed ortholog is 100%.
Bootstrap support for O84348 as seed ortholog is 100%.

Group of orthologs #5. Best score 619 bits
Score difference with first non-orthologous sequence - B.taurus:619 C.trachomatis:619

F1MDS3              	100.00%		O84716              	100.00%
F1N1Z7              	44.48%		
Q8HYZ4              	43.50%		
Bootstrap support for F1MDS3 as seed ortholog is 100%.
Bootstrap support for O84716 as seed ortholog is 100%.

Group of orthologs #6. Best score 584 bits
Score difference with first non-orthologous sequence - B.taurus:399 C.trachomatis:584

A6QLJ3              	100.00%		O84067              	100.00%
Bootstrap support for A6QLJ3 as seed ortholog is 100%.
Bootstrap support for O84067 as seed ortholog is 100%.

Group of orthologs #7. Best score 541 bits
Score difference with first non-orthologous sequence - B.taurus:461 C.trachomatis:350

P31081              	100.00%		P0C0Z7              	100.00%
Bootstrap support for P31081 as seed ortholog is 100%.
Bootstrap support for P0C0Z7 as seed ortholog is 100%.

Group of orthologs #8. Best score 519 bits
Score difference with first non-orthologous sequence - B.taurus:519 C.trachomatis:519

Q148N0              	100.00%		O84057              	100.00%
F1MWG1              	68.42%		
Bootstrap support for Q148N0 as seed ortholog is 100%.
Bootstrap support for O84057 as seed ortholog is 100%.

Group of orthologs #9. Best score 511 bits
Score difference with first non-orthologous sequence - B.taurus:48 C.trachomatis:511

E1BEJ3              	100.00%		O84444              	100.00%
Bootstrap support for E1BEJ3 as seed ortholog is 82%.
Bootstrap support for O84444 as seed ortholog is 100%.

Group of orthologs #10. Best score 507 bits
Score difference with first non-orthologous sequence - B.taurus:306 C.trachomatis:507

E1BLV6              	100.00%		O84304              	100.00%
F1N6L1              	32.23%		
Bootstrap support for E1BLV6 as seed ortholog is 99%.
Bootstrap support for O84304 as seed ortholog is 100%.

Group of orthologs #11. Best score 499 bits
Score difference with first non-orthologous sequence - B.taurus:499 C.trachomatis:499

F1MSF1              	100.00%		O84834              	100.00%
Bootstrap support for F1MSF1 as seed ortholog is 100%.
Bootstrap support for O84834 as seed ortholog is 100%.

Group of orthologs #12. Best score 483 bits
Score difference with first non-orthologous sequence - B.taurus:483 C.trachomatis:483

Q3ZCI4              	100.00%		O84066              	100.00%
Bootstrap support for Q3ZCI4 as seed ortholog is 100%.
Bootstrap support for O84066 as seed ortholog is 100%.

Group of orthologs #13. Best score 469 bits
Score difference with first non-orthologous sequence - B.taurus:469 C.trachomatis:469

Q148D3              	100.00%		O84863              	100.00%
Bootstrap support for Q148D3 as seed ortholog is 100%.
Bootstrap support for O84863 as seed ortholog is 100%.

Group of orthologs #14. Best score 465 bits
Score difference with first non-orthologous sequence - B.taurus:465 C.trachomatis:465

Q3ZBV8              	100.00%		O84585              	100.00%
A6QNM8              	40.99%		
F1MX06              	29.36%		
Bootstrap support for Q3ZBV8 as seed ortholog is 100%.
Bootstrap support for O84585 as seed ortholog is 100%.

Group of orthologs #15. Best score 462 bits
Score difference with first non-orthologous sequence - B.taurus:462 C.trachomatis:462

Q1JQB6              	100.00%		P0CD73              	100.00%
Bootstrap support for Q1JQB6 as seed ortholog is 100%.
Bootstrap support for P0CD73 as seed ortholog is 100%.

Group of orthologs #16. Best score 453 bits
Score difference with first non-orthologous sequence - B.taurus:453 C.trachomatis:453

Q2KJI7              	100.00%		O84848              	100.00%
E1BFQ0              	51.84%		
A7E2Z6              	6.00%		
Bootstrap support for Q2KJI7 as seed ortholog is 100%.
Bootstrap support for O84848 as seed ortholog is 100%.

Group of orthologs #17. Best score 452 bits
Score difference with first non-orthologous sequence - B.taurus:452 C.trachomatis:452

A6QLT9              	100.00%		O84754              	100.00%
F1MKA6              	22.91%		
Bootstrap support for A6QLT9 as seed ortholog is 100%.
Bootstrap support for O84754 as seed ortholog is 100%.

Group of orthologs #18. Best score 448 bits
Score difference with first non-orthologous sequence - B.taurus:285 C.trachomatis:448

P49410              	100.00%		P0CD71              	100.00%
Bootstrap support for P49410 as seed ortholog is 100%.
Bootstrap support for P0CD71 as seed ortholog is 100%.

Group of orthologs #19. Best score 437 bits
Score difference with first non-orthologous sequence - B.taurus:231 C.trachomatis:437

A7YW98              	100.00%		O84460              	100.00%
Bootstrap support for A7YW98 as seed ortholog is 100%.
Bootstrap support for O84460 as seed ortholog is 100%.

Group of orthologs #20. Best score 436 bits
Score difference with first non-orthologous sequence - B.taurus:335 C.trachomatis:436

E1B768              	100.00%		O84211              	100.00%
Bootstrap support for E1B768 as seed ortholog is 100%.
Bootstrap support for O84211 as seed ortholog is 100%.

Group of orthologs #21. Best score 422 bits
Score difference with first non-orthologous sequence - B.taurus:422 C.trachomatis:422

A0JNE9              	100.00%		Q59321              	100.00%
Q1RMS2              	64.92%		
Bootstrap support for A0JNE9 as seed ortholog is 100%.
Bootstrap support for Q59321 as seed ortholog is 100%.

Group of orthologs #22. Best score 420 bits
Score difference with first non-orthologous sequence - B.taurus:420 C.trachomatis:420

F6QNC4              	100.00%		O84126              	100.00%
Bootstrap support for F6QNC4 as seed ortholog is 100%.
Bootstrap support for O84126 as seed ortholog is 100%.

Group of orthologs #23. Best score 409 bits
Score difference with first non-orthologous sequence - B.taurus:256 C.trachomatis:409

A6QPU5              	100.00%		O84546              	100.00%
Bootstrap support for A6QPU5 as seed ortholog is 100%.
Bootstrap support for O84546 as seed ortholog is 100%.

Group of orthologs #24. Best score 408 bits
Score difference with first non-orthologous sequence - B.taurus:408 C.trachomatis:408

E1BIQ0              	100.00%		O84849              	100.00%
Bootstrap support for E1BIQ0 as seed ortholog is 100%.
Bootstrap support for O84849 as seed ortholog is 100%.

Group of orthologs #25. Best score 386 bits
Score difference with first non-orthologous sequence - B.taurus:386 C.trachomatis:386

P31404              	100.00%		O84310              	100.00%
Bootstrap support for P31404 as seed ortholog is 100%.
Bootstrap support for O84310 as seed ortholog is 100%.

Group of orthologs #26. Best score 382 bits
Score difference with first non-orthologous sequence - B.taurus:221 C.trachomatis:382

P46198              	100.00%		O84098              	100.00%
Bootstrap support for P46198 as seed ortholog is 100%.
Bootstrap support for O84098 as seed ortholog is 100%.

Group of orthologs #27. Best score 376 bits
Score difference with first non-orthologous sequence - B.taurus:251 C.trachomatis:376

A6QR19              	100.00%		O84591              	100.00%
Q9XSJ4              	73.92%		
Q3ZC09              	73.72%		
Bootstrap support for A6QR19 as seed ortholog is 100%.
Bootstrap support for O84591 as seed ortholog is 100%.

Group of orthologs #28. Best score 375 bits
Score difference with first non-orthologous sequence - B.taurus:375 C.trachomatis:375

F1MFA3              	100.00%		O84831              	100.00%
Bootstrap support for F1MFA3 as seed ortholog is 100%.
Bootstrap support for O84831 as seed ortholog is 100%.

Group of orthologs #29. Best score 366 bits
Score difference with first non-orthologous sequence - B.taurus:126 C.trachomatis:366

Q2KJE5              	100.00%		P0CE13              	100.00%
P10096              	24.54%		
Bootstrap support for Q2KJE5 as seed ortholog is 99%.
Bootstrap support for P0CE13 as seed ortholog is 100%.

Group of orthologs #30. Best score 331 bits
Score difference with first non-orthologous sequence - B.taurus:331 C.trachomatis:331

Q58DR8              	100.00%		O84829              	100.00%
Bootstrap support for Q58DR8 as seed ortholog is 100%.
Bootstrap support for O84829 as seed ortholog is 100%.

Group of orthologs #31. Best score 327 bits
Score difference with first non-orthologous sequence - B.taurus:327 C.trachomatis:327

Q29RP9              	100.00%		O84006              	100.00%
Bootstrap support for Q29RP9 as seed ortholog is 100%.
Bootstrap support for O84006 as seed ortholog is 100%.

Group of orthologs #32. Best score 321 bits
Score difference with first non-orthologous sequence - B.taurus:108 C.trachomatis:321

P11966              	100.00%		O84248              	100.00%
Bootstrap support for P11966 as seed ortholog is 99%.
Bootstrap support for O84248 as seed ortholog is 100%.

Group of orthologs #33. Best score 317 bits
Score difference with first non-orthologous sequence - B.taurus:248 C.trachomatis:317

F1MMK8              	100.00%		O84786              	100.00%
Bootstrap support for F1MMK8 as seed ortholog is 100%.
Bootstrap support for O84786 as seed ortholog is 100%.

Group of orthologs #34. Best score 313 bits
Score difference with first non-orthologous sequence - B.taurus:313 C.trachomatis:313

Q08DQ2              	100.00%		O84823              	100.00%
F1MZY2              	59.30%		
Bootstrap support for Q08DQ2 as seed ortholog is 100%.
Bootstrap support for O84823 as seed ortholog is 100%.

Group of orthologs #35. Best score 311 bits
Score difference with first non-orthologous sequence - B.taurus:149 C.trachomatis:311

F1N206              	100.00%		O84561              	100.00%
Bootstrap support for F1N206 as seed ortholog is 99%.
Bootstrap support for O84561 as seed ortholog is 100%.

Group of orthologs #36. Best score 310 bits
Score difference with first non-orthologous sequence - B.taurus:310 C.trachomatis:310

A5PJW8              	100.00%		P0CE09              	100.00%
E1BPX6              	22.26%		
Bootstrap support for A5PJW8 as seed ortholog is 100%.
Bootstrap support for P0CE09 as seed ortholog is 100%.

Group of orthologs #37. Best score 308 bits
Score difference with first non-orthologous sequence - B.taurus:150 C.trachomatis:308

Q2T9L8              	100.00%		O84035              	100.00%
Bootstrap support for Q2T9L8 as seed ortholog is 99%.
Bootstrap support for O84035 as seed ortholog is 100%.

Group of orthologs #38. Best score 305 bits
Score difference with first non-orthologous sequence - B.taurus:305 C.trachomatis:305

Q2TBL6              	100.00%		O84315              	100.00%
Bootstrap support for Q2TBL6 as seed ortholog is 100%.
Bootstrap support for O84315 as seed ortholog is 100%.

Group of orthologs #39. Best score 304 bits
Score difference with first non-orthologous sequence - B.taurus:304 C.trachomatis:304

Q3T0P6              	100.00%		P0CD78              	100.00%
Bootstrap support for Q3T0P6 as seed ortholog is 100%.
Bootstrap support for P0CD78 as seed ortholog is 100%.

Group of orthologs #40. Best score 302 bits
Score difference with first non-orthologous sequence - B.taurus:302 C.trachomatis:302

A5D984              	100.00%		P0CE21              	100.00%
Q1JPG7              	59.20%		
Bootstrap support for A5D984 as seed ortholog is 100%.
Bootstrap support for P0CE21 as seed ortholog is 100%.

Group of orthologs #41. Best score 297 bits
Score difference with first non-orthologous sequence - B.taurus:38 C.trachomatis:297

F1MLH1              	100.00%		O84797              	100.00%
Bootstrap support for F1MLH1 as seed ortholog is 74%.
Alternative seed ortholog is E1B9Q4 (38 bits away from this cluster)
Bootstrap support for O84797 as seed ortholog is 100%.

Group of orthologs #42. Best score 294 bits
Score difference with first non-orthologous sequence - B.taurus:294 C.trachomatis:294

Q0VCA7              	100.00%		O84775              	100.00%
Bootstrap support for Q0VCA7 as seed ortholog is 100%.
Bootstrap support for O84775 as seed ortholog is 100%.

Group of orthologs #43. Best score 292 bits
Score difference with first non-orthologous sequence - B.taurus:292 C.trachomatis:292

F1MLZ2              	100.00%		O84698              	100.00%
A1A4I1              	41.67%		
Bootstrap support for F1MLZ2 as seed ortholog is 100%.
Bootstrap support for O84698 as seed ortholog is 100%.

Group of orthologs #44. Best score 278 bits
Score difference with first non-orthologous sequence - B.taurus:278 C.trachomatis:278

G3MZY8              	100.00%		O84316              	100.00%
A4IF62              	11.77%		
E1BIX2              	6.42%		
Bootstrap support for G3MZY8 as seed ortholog is 100%.
Bootstrap support for O84316 as seed ortholog is 100%.

Group of orthologs #45. Best score 277 bits
Score difference with first non-orthologous sequence - B.taurus:277 C.trachomatis:277

Q148D5              	100.00%		O84828              	100.00%
Q3MHX5              	21.03%		
Bootstrap support for Q148D5 as seed ortholog is 100%.
Bootstrap support for O84828 as seed ortholog is 100%.

Group of orthologs #46. Best score 277 bits
Score difference with first non-orthologous sequence - B.taurus:277 C.trachomatis:277

F1N155              	100.00%		O84711              	100.00%
Bootstrap support for F1N155 as seed ortholog is 100%.
Bootstrap support for O84711 as seed ortholog is 100%.

Group of orthologs #47. Best score 273 bits
Score difference with first non-orthologous sequence - B.taurus:109 C.trachomatis:273

F1MMK2              	100.00%		O84188              	100.00%
Bootstrap support for F1MMK2 as seed ortholog is 99%.
Bootstrap support for O84188 as seed ortholog is 100%.

Group of orthologs #48. Best score 272 bits
Score difference with first non-orthologous sequence - B.taurus:272 C.trachomatis:272

G3N260              	100.00%		O84451              	100.00%
Bootstrap support for G3N260 as seed ortholog is 100%.
Bootstrap support for O84451 as seed ortholog is 100%.

Group of orthologs #49. Best score 265 bits
Score difference with first non-orthologous sequence - B.taurus:265 C.trachomatis:265

Q2HJ33              	100.00%		O84094              	100.00%
Bootstrap support for Q2HJ33 as seed ortholog is 100%.
Bootstrap support for O84094 as seed ortholog is 100%.

Group of orthologs #50. Best score 264 bits
Score difference with first non-orthologous sequence - B.taurus:264 C.trachomatis:264

Q5E9P9              	100.00%		O84439              	100.00%
Q3SZ20              	48.81%		
Bootstrap support for Q5E9P9 as seed ortholog is 100%.
Bootstrap support for O84439 as seed ortholog is 100%.

Group of orthologs #51. Best score 260 bits
Score difference with first non-orthologous sequence - B.taurus:260 C.trachomatis:260

F1N2P9              	100.00%		O84289              	100.00%
Bootstrap support for F1N2P9 as seed ortholog is 100%.
Bootstrap support for O84289 as seed ortholog is 100%.

Group of orthologs #52. Best score 258 bits
Score difference with first non-orthologous sequence - B.taurus:258 C.trachomatis:258

Q3ZBD7              	100.00%		P0CD72              	100.00%
Bootstrap support for Q3ZBD7 as seed ortholog is 100%.
Bootstrap support for P0CD72 as seed ortholog is 100%.

Group of orthologs #53. Best score 257 bits
Score difference with first non-orthologous sequence - B.taurus:257 C.trachomatis:67

Q2KI15              	100.00%		O84026              	100.00%
Q3MHI7              	13.45%		
Bootstrap support for Q2KI15 as seed ortholog is 100%.
Bootstrap support for O84026 as seed ortholog is 97%.

Group of orthologs #54. Best score 253 bits
Score difference with first non-orthologous sequence - B.taurus:105 C.trachomatis:253

P12344              	100.00%		O84642              	100.00%
P33097              	20.29%		
Bootstrap support for P12344 as seed ortholog is 99%.
Bootstrap support for O84642 as seed ortholog is 100%.

Group of orthologs #55. Best score 253 bits
Score difference with first non-orthologous sequence - B.taurus:164 C.trachomatis:253

Q3T145              	100.00%		O84381              	100.00%
Bootstrap support for Q3T145 as seed ortholog is 100%.
Bootstrap support for O84381 as seed ortholog is 100%.

Group of orthologs #56. Best score 250 bits
Score difference with first non-orthologous sequence - B.taurus:250 C.trachomatis:250

F1MHD4              	100.00%		P36431              	100.00%
Bootstrap support for F1MHD4 as seed ortholog is 100%.
Bootstrap support for P36431 as seed ortholog is 100%.

Group of orthologs #57. Best score 249 bits
Score difference with first non-orthologous sequence - B.taurus:121 C.trachomatis:98

P11179              	100.00%		O84058              	100.00%
Bootstrap support for P11179 as seed ortholog is 99%.
Bootstrap support for O84058 as seed ortholog is 99%.

Group of orthologs #58. Best score 248 bits
Score difference with first non-orthologous sequence - B.taurus:182 C.trachomatis:248

P31407              	100.00%		O84309              	100.00%
P31408              	100.00%		
Bootstrap support for P31407 as seed ortholog is 100%.
Bootstrap support for P31408 as seed ortholog is 100%.
Bootstrap support for O84309 as seed ortholog is 100%.

Group of orthologs #59. Best score 247 bits
Score difference with first non-orthologous sequence - B.taurus:123 C.trachomatis:247

E1BK31              	100.00%		O84548              	100.00%
Bootstrap support for E1BK31 as seed ortholog is 99%.
Bootstrap support for O84548 as seed ortholog is 100%.

Group of orthologs #60. Best score 246 bits
Score difference with first non-orthologous sequence - B.taurus:246 C.trachomatis:246

A4FV36              	100.00%		O84360              	100.00%
Bootstrap support for A4FV36 as seed ortholog is 100%.
Bootstrap support for O84360 as seed ortholog is 100%.

Group of orthologs #61. Best score 242 bits
Score difference with first non-orthologous sequence - B.taurus:140 C.trachomatis:242

E1BGH0              	100.00%		O84352              	100.00%
A4FUE2              	14.31%		
Q2KJA2              	11.67%		
Bootstrap support for E1BGH0 as seed ortholog is 99%.
Bootstrap support for O84352 as seed ortholog is 100%.

Group of orthologs #62. Best score 236 bits
Score difference with first non-orthologous sequence - B.taurus:49 C.trachomatis:236

Q58DA2              	100.00%		O84423              	100.00%
Bootstrap support for Q58DA2 as seed ortholog is 95%.
Bootstrap support for O84423 as seed ortholog is 100%.

Group of orthologs #63. Best score 233 bits
Score difference with first non-orthologous sequence - B.taurus:233 C.trachomatis:233

A5PKH8              	100.00%		O84297              	100.00%
A6QQ11              	49.62%		
Bootstrap support for A5PKH8 as seed ortholog is 100%.
Bootstrap support for O84297 as seed ortholog is 100%.

Group of orthologs #64. Best score 232 bits
Score difference with first non-orthologous sequence - B.taurus:91 C.trachomatis:232

P00727              	100.00%		O84049              	100.00%
Bootstrap support for P00727 as seed ortholog is 97%.
Bootstrap support for O84049 as seed ortholog is 100%.

Group of orthologs #65. Best score 228 bits
Score difference with first non-orthologous sequence - B.taurus:228 C.trachomatis:228

P41976              	100.00%		O84296              	100.00%
Bootstrap support for P41976 as seed ortholog is 100%.
Bootstrap support for O84296 as seed ortholog is 100%.

Group of orthologs #66. Best score 226 bits
Score difference with first non-orthologous sequence - B.taurus:226 C.trachomatis:226

Q5BIP7              	100.00%		O84562              	100.00%
Bootstrap support for Q5BIP7 as seed ortholog is 100%.
Bootstrap support for O84562 as seed ortholog is 100%.

Group of orthologs #67. Best score 224 bits
Score difference with first non-orthologous sequence - B.taurus:224 C.trachomatis:224

Q0P5C2              	100.00%		O84081              	100.00%
E1BNJ2              	49.67%		
Bootstrap support for Q0P5C2 as seed ortholog is 100%.
Bootstrap support for O84081 as seed ortholog is 100%.

Group of orthologs #68. Best score 223 bits
Score difference with first non-orthologous sequence - B.taurus:38 C.trachomatis:82

P22439              	100.00%		O84249              	100.00%
Bootstrap support for P22439 as seed ortholog is 78%.
Bootstrap support for O84249 as seed ortholog is 94%.

Group of orthologs #69. Best score 223 bits
Score difference with first non-orthologous sequence - B.taurus:223 C.trachomatis:99

Q2T9U1              	100.00%		O84028              	100.00%
Bootstrap support for Q2T9U1 as seed ortholog is 100%.
Bootstrap support for O84028 as seed ortholog is 99%.

Group of orthologs #70. Best score 222 bits
Score difference with first non-orthologous sequence - B.taurus:34 C.trachomatis:222

A1A4J9              	100.00%		O84345              	100.00%
Bootstrap support for A1A4J9 as seed ortholog is 82%.
Bootstrap support for O84345 as seed ortholog is 100%.

Group of orthologs #71. Best score 219 bits
Score difference with first non-orthologous sequence - B.taurus:219 C.trachomatis:219

A5D7G0              	100.00%		O84065              	100.00%
Bootstrap support for A5D7G0 as seed ortholog is 100%.
Bootstrap support for O84065 as seed ortholog is 100%.

Group of orthologs #72. Best score 218 bits
Score difference with first non-orthologous sequence - B.taurus:218 C.trachomatis:218

Q17QB8              	100.00%		O84613              	100.00%
Bootstrap support for Q17QB8 as seed ortholog is 100%.
Bootstrap support for O84613 as seed ortholog is 100%.

Group of orthologs #73. Best score 215 bits
Score difference with first non-orthologous sequence - B.taurus:215 C.trachomatis:215

Q2KIF8              	100.00%		O84787              	100.00%
A4FUC8              	14.52%		
Bootstrap support for Q2KIF8 as seed ortholog is 100%.
Bootstrap support for O84787 as seed ortholog is 100%.

Group of orthologs #74. Best score 215 bits
Score difference with first non-orthologous sequence - B.taurus:215 C.trachomatis:215

Q58DK5              	100.00%		O84638              	100.00%
Bootstrap support for Q58DK5 as seed ortholog is 100%.
Bootstrap support for O84638 as seed ortholog is 100%.

Group of orthologs #75. Best score 213 bits
Score difference with first non-orthologous sequence - B.taurus:213 C.trachomatis:119

F1MUT8              	100.00%		O84406              	100.00%
P46411              	34.81%		
Q95135              	27.87%		
F1MUJ6              	26.28%		
G3X737              	19.45%		
A2VDL4              	19.34%		
Q95JC7              	16.15%		
Bootstrap support for F1MUT8 as seed ortholog is 100%.
Bootstrap support for O84406 as seed ortholog is 99%.

Group of orthologs #76. Best score 207 bits
Score difference with first non-orthologous sequence - B.taurus:207 C.trachomatis:207

Q24K02              	100.00%		O84812              	100.00%
F1MXX5              	17.13%		
Bootstrap support for Q24K02 as seed ortholog is 100%.
Bootstrap support for O84812 as seed ortholog is 100%.

Group of orthologs #77. Best score 207 bits
Score difference with first non-orthologous sequence - B.taurus:207 C.trachomatis:68

Q2KHU4              	100.00%		O84712              	100.00%
Bootstrap support for Q2KHU4 as seed ortholog is 100%.
Bootstrap support for O84712 as seed ortholog is 99%.

Group of orthologs #78. Best score 203 bits
Score difference with first non-orthologous sequence - B.taurus:34 C.trachomatis:203

Q9N0F3              	100.00%		O84734              	100.00%
Bootstrap support for Q9N0F3 as seed ortholog is 79%.
Bootstrap support for O84734 as seed ortholog is 100%.

Group of orthologs #79. Best score 201 bits
Score difference with first non-orthologous sequence - B.taurus:201 C.trachomatis:201

E1BKR0              	100.00%		O84266              	100.00%
E1BL88              	100.00%		
G3MYQ9              	21.10%		
F1MCG5              	19.09%		
A6QPZ6              	17.70%		
Bootstrap support for E1BKR0 as seed ortholog is 100%.
Bootstrap support for E1BL88 as seed ortholog is 100%.
Bootstrap support for O84266 as seed ortholog is 100%.

Group of orthologs #80. Best score 195 bits
Score difference with first non-orthologous sequence - B.taurus:195 C.trachomatis:195

P31039              	100.00%		O84596              	100.00%
Bootstrap support for P31039 as seed ortholog is 100%.
Bootstrap support for O84596 as seed ortholog is 100%.

Group of orthologs #81. Best score 194 bits
Score difference with first non-orthologous sequence - B.taurus:194 C.trachomatis:194

E1BH64              	100.00%		O84704              	100.00%
Bootstrap support for E1BH64 as seed ortholog is 100%.
Bootstrap support for O84704 as seed ortholog is 100%.

Group of orthologs #82. Best score 193 bits
Score difference with first non-orthologous sequence - B.taurus:193 C.trachomatis:121

F1MKP7              	100.00%		O84859              	100.00%
A6QLA4              	11.84%		
Bootstrap support for F1MKP7 as seed ortholog is 100%.
Bootstrap support for O84859 as seed ortholog is 99%.

Group of orthologs #83. Best score 189 bits
Score difference with first non-orthologous sequence - B.taurus:189 C.trachomatis:189

F1MCU6              	100.00%		O84196              	100.00%
Bootstrap support for F1MCU6 as seed ortholog is 100%.
Bootstrap support for O84196 as seed ortholog is 100%.

Group of orthologs #84. Best score 188 bits
Score difference with first non-orthologous sequence - B.taurus:108 C.trachomatis:188

Q9BGI3              	100.00%		O84608              	100.00%
Q5E947              	56.50%		
Q9BGI2              	45.29%		
P35705              	39.91%		
Bootstrap support for Q9BGI3 as seed ortholog is 99%.
Bootstrap support for O84608 as seed ortholog is 100%.

Group of orthologs #85. Best score 186 bits
Score difference with first non-orthologous sequence - B.taurus:35 C.trachomatis:186

A4IFA7              	100.00%		P38004              	100.00%
Bootstrap support for A4IFA7 as seed ortholog is 97%.
Bootstrap support for P38004 as seed ortholog is 100%.

Group of orthologs #86. Best score 185 bits
Score difference with first non-orthologous sequence - B.taurus:185 C.trachomatis:185

F1MZP0              	100.00%		O84874              	100.00%
Bootstrap support for F1MZP0 as seed ortholog is 100%.
Bootstrap support for O84874 as seed ortholog is 100%.

Group of orthologs #87. Best score 184 bits
Score difference with first non-orthologous sequence - B.taurus:72 C.trachomatis:184

Q2T9Y3              	100.00%		O84247              	100.00%
A7MB35              	86.18%		
Bootstrap support for Q2T9Y3 as seed ortholog is 98%.
Bootstrap support for O84247 as seed ortholog is 100%.

Group of orthologs #88. Best score 179 bits
Score difference with first non-orthologous sequence - B.taurus:179 C.trachomatis:179

Q5E956              	100.00%		O84332              	100.00%
Bootstrap support for Q5E956 as seed ortholog is 100%.
Bootstrap support for O84332 as seed ortholog is 100%.

Group of orthologs #89. Best score 178 bits
Score difference with first non-orthologous sequence - B.taurus:178 C.trachomatis:178

F1N5R0              	100.00%		O84234              	100.00%
Q28039              	31.72%		
A5D7H9              	31.65%		
A6QLU4              	29.94%		
A0JND1              	25.70%		
Q9MZ34              	24.47%		
A5PJX7              	23.72%		
P51143              	23.51%		
E1BPI1              	23.10%		
O18875              	23.03%		
F6QN23              	23.03%		
P27922              	22.49%		
Q9XT49              	21.87%		
Q9XS59              	17.16%		
E1BHC0              	13.88%		
A1A4L2              	12.44%		
G5E6L1              	10.46%		
F1MAX1              	10.18%		
F1MEL1              	6.63%		
Bootstrap support for F1N5R0 as seed ortholog is 100%.
Bootstrap support for O84234 as seed ortholog is 100%.

Group of orthologs #90. Best score 175 bits
Score difference with first non-orthologous sequence - B.taurus:175 C.trachomatis:175

F1N152              	100.00%		P18584              	100.00%
E1BJW1              	42.70%		
G3MYZ2              	31.84%		
A0JNK3              	20.60%		
Bootstrap support for F1N152 as seed ortholog is 100%.
Bootstrap support for P18584 as seed ortholog is 100%.

Group of orthologs #91. Best score 175 bits
Score difference with first non-orthologous sequence - B.taurus:175 C.trachomatis:175

A0JN80              	100.00%		O84402              	100.00%
F1N1R4              	17.51%		
E1B7R0              	8.73%		
Bootstrap support for A0JN80 as seed ortholog is 100%.
Bootstrap support for O84402 as seed ortholog is 100%.

Group of orthologs #92. Best score 170 bits
Score difference with first non-orthologous sequence - B.taurus:38 C.trachomatis:170

P00829              	100.00%		O84676              	100.00%
                    	       		O84722              	11.57%
Bootstrap support for P00829 as seed ortholog is 83%.
Bootstrap support for O84676 as seed ortholog is 100%.

Group of orthologs #93. Best score 168 bits
Score difference with first non-orthologous sequence - B.taurus:168 C.trachomatis:58

Q6B855              	100.00%		O84755              	100.00%
Q2NKZ4              	63.16%		
Q2NL26              	56.37%		
Bootstrap support for Q6B855 as seed ortholog is 100%.
Bootstrap support for O84755 as seed ortholog is 86%.

Group of orthologs #94. Best score 167 bits
Score difference with first non-orthologous sequence - B.taurus:167 C.trachomatis:167

A0JN95              	100.00%		O84274              	100.00%
Bootstrap support for A0JN95 as seed ortholog is 100%.
Bootstrap support for O84274 as seed ortholog is 100%.

Group of orthologs #95. Best score 165 bits
Score difference with first non-orthologous sequence - B.taurus:165 C.trachomatis:165

G3N337              	100.00%		O84720              	100.00%
F1MJP7              	45.28%		
Bootstrap support for G3N337 as seed ortholog is 100%.
Bootstrap support for O84720 as seed ortholog is 100%.

Group of orthologs #96. Best score 165 bits
Score difference with first non-orthologous sequence - B.taurus:165 C.trachomatis:165

Q2KHT5              	100.00%		O84007              	100.00%
Bootstrap support for Q2KHT5 as seed ortholog is 100%.
Bootstrap support for O84007 as seed ortholog is 100%.

Group of orthologs #97. Best score 164 bits
Score difference with first non-orthologous sequence - B.taurus:164 C.trachomatis:101

A5D7B1              	100.00%		O84055              	100.00%
Bootstrap support for A5D7B1 as seed ortholog is 100%.
Bootstrap support for O84055 as seed ortholog is 99%.

Group of orthologs #98. Best score 162 bits
Score difference with first non-orthologous sequence - B.taurus:162 C.trachomatis:162

Q58DN9              	100.00%		O84456              	100.00%
Bootstrap support for Q58DN9 as seed ortholog is 100%.
Bootstrap support for O84456 as seed ortholog is 100%.

Group of orthologs #99. Best score 155 bits
Score difference with first non-orthologous sequence - B.taurus:54 C.trachomatis:155

E1BHC5              	100.00%		O84200              	100.00%
Bootstrap support for E1BHC5 as seed ortholog is 90%.
Bootstrap support for O84200 as seed ortholog is 100%.

Group of orthologs #100. Best score 152 bits
Score difference with first non-orthologous sequence - B.taurus:152 C.trachomatis:39

A5PKG4              	100.00%		O84260              	100.00%
A2VDS1              	7.40%		
Bootstrap support for A5PKG4 as seed ortholog is 100%.
Bootstrap support for O84260 as seed ortholog is 83%.

Group of orthologs #101. Best score 150 bits
Score difference with first non-orthologous sequence - B.taurus:104 C.trachomatis:150

E1B959              	100.00%		O84727              	100.00%
Q32KV0              	100.00%		
Q3T014              	96.88%		
Q3SZ62              	75.68%		
G3N3V1              	64.86%		
Bootstrap support for E1B959 as seed ortholog is 99%.
Bootstrap support for Q32KV0 as seed ortholog is 99%.
Bootstrap support for O84727 as seed ortholog is 100%.

Group of orthologs #102. Best score 148 bits
Score difference with first non-orthologous sequence - B.taurus:148 C.trachomatis:148

E1BP51              	100.00%		O84632              	100.00%
Bootstrap support for E1BP51 as seed ortholog is 100%.
Bootstrap support for O84632 as seed ortholog is 100%.

Group of orthologs #103. Best score 143 bits
Score difference with first non-orthologous sequence - B.taurus:143 C.trachomatis:143

E1BEX4              	100.00%		O84752              	100.00%
Bootstrap support for E1BEX4 as seed ortholog is 100%.
Bootstrap support for O84752 as seed ortholog is 100%.

Group of orthologs #104. Best score 136 bits
Score difference with first non-orthologous sequence - B.taurus:136 C.trachomatis:136

E1BA65              	100.00%		O84579              	100.00%
Bootstrap support for E1BA65 as seed ortholog is 100%.
Bootstrap support for O84579 as seed ortholog is 100%.

Group of orthologs #105. Best score 134 bits
Score difference with first non-orthologous sequence - B.taurus:134 C.trachomatis:134

F6RA00              	100.00%		O84771              	100.00%
Bootstrap support for F6RA00 as seed ortholog is 100%.
Bootstrap support for O84771 as seed ortholog is 100%.

Group of orthologs #106. Best score 133 bits
Score difference with first non-orthologous sequence - B.taurus:76 C.trachomatis:133

E1BMQ6              	100.00%		O84732              	100.00%
Q0VCY0              	75.35%		
F1MPR3              	74.05%		
P57709              	18.50%		
F1MMF3              	16.76%		
A2VDL6              	13.76%		
F1MR06              	13.28%		
E1B8N5              	12.95%		
Q08DA1              	12.95%		
F1N1K4              	12.40%		
F1MS16              	9.96%		
F1MQ01              	9.68%		
F1N7J2              	8.98%		
F1MN60              	7.94%		
F1MXW4              	7.45%		
Bootstrap support for E1BMQ6 as seed ortholog is 91%.
Bootstrap support for O84732 as seed ortholog is 100%.

Group of orthologs #107. Best score 133 bits
Score difference with first non-orthologous sequence - B.taurus:133 C.trachomatis:133

E1BFQ8              	100.00%		O84835              	100.00%
E1BI58              	74.96%		
Bootstrap support for E1BFQ8 as seed ortholog is 100%.
Bootstrap support for O84835 as seed ortholog is 100%.

Group of orthologs #108. Best score 133 bits
Score difference with first non-orthologous sequence - B.taurus:133 C.trachomatis:133

P22600              	100.00%		O84492              	100.00%
Bootstrap support for P22600 as seed ortholog is 100%.
Bootstrap support for O84492 as seed ortholog is 100%.

Group of orthologs #109. Best score 131 bits
Score difference with first non-orthologous sequence - B.taurus:131 C.trachomatis:131

Q58DD2              	100.00%		O84864              	100.00%
E1BFJ3              	6.17%		
Bootstrap support for Q58DD2 as seed ortholog is 100%.
Bootstrap support for O84864 as seed ortholog is 100%.

Group of orthologs #110. Best score 130 bits
Score difference with first non-orthologous sequence - B.taurus:130 C.trachomatis:130

Q3T099              	100.00%		O84589              	100.00%
Bootstrap support for Q3T099 as seed ortholog is 100%.
Bootstrap support for O84589 as seed ortholog is 100%.

Group of orthologs #111. Best score 129 bits
Score difference with first non-orthologous sequence - B.taurus:38 C.trachomatis:129

Q2TA12              	100.00%		O84530              	100.00%
Bootstrap support for Q2TA12 as seed ortholog is 89%.
Bootstrap support for O84530 as seed ortholog is 100%.

Group of orthologs #112. Best score 126 bits
Score difference with first non-orthologous sequence - B.taurus:126 C.trachomatis:126

F1MGY1              	100.00%		O84649              	100.00%
Bootstrap support for F1MGY1 as seed ortholog is 100%.
Bootstrap support for O84649 as seed ortholog is 100%.

Group of orthologs #113. Best score 122 bits
Score difference with first non-orthologous sequence - B.taurus:122 C.trachomatis:122

E1BPG0              	100.00%		O84241              	100.00%
Bootstrap support for E1BPG0 as seed ortholog is 100%.
Bootstrap support for O84241 as seed ortholog is 100%.

Group of orthologs #114. Best score 121 bits
Score difference with first non-orthologous sequence - B.taurus:30 C.trachomatis:121

P08760              	100.00%		O84130              	100.00%
Q0VCP1              	45.40%		
P08166              	14.84%		
Bootstrap support for P08760 as seed ortholog is 83%.
Bootstrap support for O84130 as seed ortholog is 100%.

Group of orthologs #115. Best score 121 bits
Score difference with first non-orthologous sequence - B.taurus:121 C.trachomatis:121

P46195              	100.00%		O84033              	100.00%
Bootstrap support for P46195 as seed ortholog is 100%.
Bootstrap support for O84033 as seed ortholog is 100%.

Group of orthologs #116. Best score 120 bits
Score difference with first non-orthologous sequence - B.taurus:120 C.trachomatis:120

Q58DG1              	100.00%		O84391              	100.00%
Bootstrap support for Q58DG1 as seed ortholog is 100%.
Bootstrap support for O84391 as seed ortholog is 100%.

Group of orthologs #117. Best score 117 bits
Score difference with first non-orthologous sequence - B.taurus:31 C.trachomatis:117

P52174              	100.00%		O84508              	100.00%
P52175              	97.96%		
Q3T0Q4              	84.18%		
G1K1A3              	58.16%		
A5PK70              	53.57%		
Bootstrap support for P52174 as seed ortholog is 94%.
Bootstrap support for O84508 as seed ortholog is 100%.

Group of orthologs #118. Best score 114 bits
Score difference with first non-orthologous sequence - B.taurus:114 C.trachomatis:114

F1MS81              	100.00%		O84478              	100.00%
Bootstrap support for F1MS81 as seed ortholog is 100%.
Bootstrap support for O84478 as seed ortholog is 100%.

Group of orthologs #119. Best score 113 bits
Score difference with first non-orthologous sequence - B.taurus:113 C.trachomatis:113

E1BEB7              	100.00%		O84096              	100.00%
Bootstrap support for E1BEB7 as seed ortholog is 100%.
Bootstrap support for O84096 as seed ortholog is 100%.

Group of orthologs #120. Best score 113 bits
Score difference with first non-orthologous sequence - B.taurus:113 C.trachomatis:113

E1BJK7              	100.00%		O84463              	100.00%
Bootstrap support for E1BJK7 as seed ortholog is 100%.
Bootstrap support for O84463 as seed ortholog is 100%.

Group of orthologs #121. Best score 112 bits
Score difference with first non-orthologous sequence - B.taurus:112 C.trachomatis:112

Q1RML6              	100.00%		O84710              	100.00%
                    	       		O84415              	6.44%
Bootstrap support for Q1RML6 as seed ortholog is 100%.
Bootstrap support for O84710 as seed ortholog is 100%.

Group of orthologs #122. Best score 112 bits
Score difference with first non-orthologous sequence - B.taurus:36 C.trachomatis:112

A1A4M4              	100.00%		O84599              	100.00%
Bootstrap support for A1A4M4 as seed ortholog is 87%.
Bootstrap support for O84599 as seed ortholog is 100%.

Group of orthologs #123. Best score 112 bits
Score difference with first non-orthologous sequence - B.taurus:112 C.trachomatis:112

G5E6S3              	100.00%		O84123              	100.00%
Bootstrap support for G5E6S3 as seed ortholog is 100%.
Bootstrap support for O84123 as seed ortholog is 100%.

Group of orthologs #124. Best score 111 bits
Score difference with first non-orthologous sequence - B.taurus:60 C.trachomatis:111

Q29RU1              	100.00%		P66370              	100.00%
Bootstrap support for Q29RU1 as seed ortholog is 99%.
Bootstrap support for P66370 as seed ortholog is 100%.

Group of orthologs #125. Best score 108 bits
Score difference with first non-orthologous sequence - B.taurus:12 C.trachomatis:108

Q2KHT8              	100.00%		O84358              	100.00%
Bootstrap support for Q2KHT8 as seed ortholog is 64%.
Alternative seed ortholog is Q2TBQ0 (12 bits away from this cluster)
Bootstrap support for O84358 as seed ortholog is 100%.

Group of orthologs #126. Best score 108 bits
Score difference with first non-orthologous sequence - B.taurus:108 C.trachomatis:108

Q3T186              	100.00%		O84215              	100.00%
Bootstrap support for Q3T186 as seed ortholog is 100%.
Bootstrap support for O84215 as seed ortholog is 100%.

Group of orthologs #127. Best score 102 bits
Score difference with first non-orthologous sequence - B.taurus:102 C.trachomatis:102

Q5EA88              	100.00%		O84719              	100.00%
A6QQR7              	71.71%		
Bootstrap support for Q5EA88 as seed ortholog is 100%.
Bootstrap support for O84719 as seed ortholog is 100%.

Group of orthologs #128. Best score 102 bits
Score difference with first non-orthologous sequence - B.taurus:102 C.trachomatis:102

Q5E9J7              	100.00%		O84851              	100.00%
Bootstrap support for Q5E9J7 as seed ortholog is 100%.
Bootstrap support for O84851 as seed ortholog is 100%.

Group of orthologs #129. Best score 101 bits
Score difference with first non-orthologous sequence - B.taurus:101 C.trachomatis:101

Q2KIN5              	100.00%		O84301              	100.00%
Bootstrap support for Q2KIN5 as seed ortholog is 100%.
Bootstrap support for O84301 as seed ortholog is 100%.

Group of orthologs #130. Best score 100 bits
Score difference with first non-orthologous sequence - B.taurus:100 C.trachomatis:100

Q3ZCF5              	100.00%		O84212              	100.00%
Q17QF0              	10.08%		
Bootstrap support for Q3ZCF5 as seed ortholog is 100%.
Bootstrap support for O84212 as seed ortholog is 100%.

Group of orthologs #131. Best score 100 bits
Score difference with first non-orthologous sequence - B.taurus:22 C.trachomatis:100

A6QP68              	100.00%		O84469              	100.00%
Bootstrap support for A6QP68 as seed ortholog is 67%.
Alternative seed ortholog is Q3SX07 (22 bits away from this cluster)
Bootstrap support for O84469 as seed ortholog is 100%.

Group of orthologs #132. Best score 100 bits
Score difference with first non-orthologous sequence - B.taurus:100 C.trachomatis:100

Q29RY4              	100.00%		O84350              	100.00%
Bootstrap support for Q29RY4 as seed ortholog is 100%.
Bootstrap support for O84350 as seed ortholog is 100%.

Group of orthologs #133. Best score 99 bits
Score difference with first non-orthologous sequence - B.taurus:99 C.trachomatis:99

Q0P5L8              	100.00%		O84782              	100.00%
Q3ZC31              	17.74%		
A6QLI6              	14.99%		
A5PKM3              	10.04%		
Q3MHG1              	5.91%		
F1ML45              	5.50%		
Bootstrap support for Q0P5L8 as seed ortholog is 100%.
Bootstrap support for O84782 as seed ortholog is 100%.

Group of orthologs #134. Best score 97 bits
Score difference with first non-orthologous sequence - B.taurus:38 C.trachomatis:97

P82911              	100.00%		P0CE03              	100.00%
Bootstrap support for P82911 as seed ortholog is 98%.
Bootstrap support for P0CE03 as seed ortholog is 100%.

Group of orthologs #135. Best score 97 bits
Score difference with first non-orthologous sequence - B.taurus:51 C.trachomatis:97

Q3T040              	100.00%		P0CE06              	100.00%
Bootstrap support for Q3T040 as seed ortholog is 96%.
Bootstrap support for P0CE06 as seed ortholog is 100%.

Group of orthologs #136. Best score 95 bits
Score difference with first non-orthologous sequence - B.taurus:95 C.trachomatis:95

Q8SQ21              	100.00%		O84390              	100.00%
P62958              	32.31%		
Bootstrap support for Q8SQ21 as seed ortholog is 100%.
Bootstrap support for O84390 as seed ortholog is 100%.

Group of orthologs #137. Best score 95 bits
Score difference with first non-orthologous sequence - B.taurus:95 C.trachomatis:95

Q58DH2              	100.00%		P0CD79              	100.00%
Bootstrap support for Q58DH2 as seed ortholog is 100%.
Bootstrap support for P0CD79 as seed ortholog is 100%.

Group of orthologs #138. Best score 94 bits
Score difference with first non-orthologous sequence - B.taurus:94 C.trachomatis:94

A7MBD4              	100.00%		O84843              	100.00%
Bootstrap support for A7MBD4 as seed ortholog is 100%.
Bootstrap support for O84843 as seed ortholog is 100%.

Group of orthologs #139. Best score 94 bits
Score difference with first non-orthologous sequence - B.taurus:94 C.trachomatis:94

P82923              	100.00%		O84687              	100.00%
Bootstrap support for P82923 as seed ortholog is 100%.
Bootstrap support for O84687 as seed ortholog is 100%.

Group of orthologs #140. Best score 92 bits
Score difference with first non-orthologous sequence - B.taurus:92 C.trachomatis:92

E1BMX2              	100.00%		P55137              	100.00%
Bootstrap support for E1BMX2 as seed ortholog is 100%.
Bootstrap support for P55137 as seed ortholog is 100%.

Group of orthologs #141. Best score 92 bits
Score difference with first non-orthologous sequence - B.taurus:92 C.trachomatis:92

Q0P5A2              	100.00%		O84435              	100.00%
Bootstrap support for Q0P5A2 as seed ortholog is 100%.
Bootstrap support for O84435 as seed ortholog is 100%.

Group of orthologs #142. Best score 91 bits
Score difference with first non-orthologous sequence - B.taurus:91 C.trachomatis:91

E1BK88              	100.00%		O84806              	100.00%
Bootstrap support for E1BK88 as seed ortholog is 100%.
Bootstrap support for O84806 as seed ortholog is 100%.

Group of orthologs #143. Best score 89 bits
Score difference with first non-orthologous sequence - B.taurus:89 C.trachomatis:89

Q2YDI0              	100.00%		O84321              	100.00%
Bootstrap support for Q2YDI0 as seed ortholog is 100%.
Bootstrap support for O84321 as seed ortholog is 100%.

Group of orthologs #144. Best score 88 bits
Score difference with first non-orthologous sequence - B.taurus:88 C.trachomatis:88

E1BA42              	100.00%		O84865              	100.00%
Bootstrap support for E1BA42 as seed ortholog is 100%.
Bootstrap support for O84865 as seed ortholog is 100%.

Group of orthologs #145. Best score 87 bits
Score difference with first non-orthologous sequence - B.taurus:87 C.trachomatis:87

Q3SYT8              	100.00%		O84442              	100.00%
Q4JIJ2              	16.20%		
Q1JPJ0              	15.81%		
Q27995              	13.41%		
P29473              	11.86%		
Bootstrap support for Q3SYT8 as seed ortholog is 100%.
Bootstrap support for O84442 as seed ortholog is 100%.

Group of orthologs #146. Best score 87 bits
Score difference with first non-orthologous sequence - B.taurus:87 C.trachomatis:87

Q3T189              	100.00%		O84595              	100.00%
Bootstrap support for Q3T189 as seed ortholog is 100%.
Bootstrap support for O84595 as seed ortholog is 100%.

Group of orthologs #147. Best score 82 bits
Score difference with first non-orthologous sequence - B.taurus:82 C.trachomatis:82

Q2NKU1              	100.00%		O84294              	100.00%
G3N0R2              	73.87%		
Bootstrap support for Q2NKU1 as seed ortholog is 100%.
Bootstrap support for O84294 as seed ortholog is 100%.

Group of orthologs #148. Best score 81 bits
Score difference with first non-orthologous sequence - B.taurus:81 C.trachomatis:81

P43896              	100.00%		O84686              	100.00%
Bootstrap support for P43896 as seed ortholog is 100%.
Bootstrap support for O84686 as seed ortholog is 100%.

Group of orthologs #149. Best score 81 bits
Score difference with first non-orthologous sequence - B.taurus:81 C.trachomatis:81

Q3ZBS0              	100.00%		O84499              	100.00%
Bootstrap support for Q3ZBS0 as seed ortholog is 100%.
Bootstrap support for O84499 as seed ortholog is 100%.

Group of orthologs #150. Best score 80 bits
Score difference with first non-orthologous sequence - B.taurus:80 C.trachomatis:80

Q2KI84              	100.00%		O84547              	100.00%
A5D7V9              	72.67%		
Bootstrap support for Q2KI84 as seed ortholog is 100%.
Bootstrap support for O84547 as seed ortholog is 100%.

Group of orthologs #151. Best score 80 bits
Score difference with first non-orthologous sequence - B.taurus:80 C.trachomatis:80

E1BCH6              	100.00%		O84468              	100.00%
Bootstrap support for E1BCH6 as seed ortholog is 100%.
Bootstrap support for O84468 as seed ortholog is 100%.

Group of orthologs #152. Best score 79 bits
Score difference with first non-orthologous sequence - B.taurus:79 C.trachomatis:79

F1MC55              	100.00%		O84027              	100.00%
Bootstrap support for F1MC55 as seed ortholog is 100%.
Bootstrap support for O84027 as seed ortholog is 100%.

Group of orthologs #153. Best score 79 bits
Score difference with first non-orthologous sequence - B.taurus:79 C.trachomatis:79

O77480              	100.00%		O84535              	100.00%
Bootstrap support for O77480 as seed ortholog is 100%.
Bootstrap support for O84535 as seed ortholog is 100%.

Group of orthologs #154. Best score 79 bits
Score difference with first non-orthologous sequence - B.taurus:79 C.trachomatis:79

Q3ZBX6              	100.00%		O84533              	100.00%
Bootstrap support for Q3ZBX6 as seed ortholog is 100%.
Bootstrap support for O84533 as seed ortholog is 100%.

Group of orthologs #155. Best score 78 bits
Score difference with first non-orthologous sequence - B.taurus:78 C.trachomatis:78

F1N5S7              	100.00%		O84357              	100.00%
Bootstrap support for F1N5S7 as seed ortholog is 100%.
Bootstrap support for O84357 as seed ortholog is 100%.

Group of orthologs #156. Best score 78 bits
Score difference with first non-orthologous sequence - B.taurus:78 C.trachomatis:78

Q2KIC5              	100.00%		O84611              	100.00%
Bootstrap support for Q2KIC5 as seed ortholog is 100%.
Bootstrap support for O84611 as seed ortholog is 100%.

Group of orthologs #157. Best score 77 bits
Score difference with first non-orthologous sequence - B.taurus:77 C.trachomatis:77

Q05B83              	100.00%		O84338              	100.00%
Q32PI3              	21.31%		
Q29RS9              	17.95%		
Bootstrap support for Q05B83 as seed ortholog is 100%.
Bootstrap support for O84338 as seed ortholog is 100%.

Group of orthologs #158. Best score 77 bits
Score difference with first non-orthologous sequence - B.taurus:77 C.trachomatis:77

Q2TBQ8              	100.00%		O84189              	100.00%
Bootstrap support for Q2TBQ8 as seed ortholog is 100%.
Bootstrap support for O84189 as seed ortholog is 100%.

Group of orthologs #159. Best score 76 bits
Score difference with first non-orthologous sequence - B.taurus:76 C.trachomatis:76

Q5E9Z1              	100.00%		O84665              	100.00%
Q2TBK7              	5.70%		
Bootstrap support for Q5E9Z1 as seed ortholog is 100%.
Bootstrap support for O84665 as seed ortholog is 100%.

Group of orthologs #160. Best score 76 bits
Score difference with first non-orthologous sequence - B.taurus:76 C.trachomatis:76

Q17QT4              	100.00%		O84108              	100.00%
Bootstrap support for Q17QT4 as seed ortholog is 100%.
Bootstrap support for O84108 as seed ortholog is 100%.

Group of orthologs #161. Best score 76 bits
Score difference with first non-orthologous sequence - B.taurus:76 C.trachomatis:76

Q0VCQ4              	100.00%		O84684              	100.00%
Bootstrap support for Q0VCQ4 as seed ortholog is 100%.
Bootstrap support for O84684 as seed ortholog is 100%.

Group of orthologs #162. Best score 76 bits
Score difference with first non-orthologous sequence - B.taurus:11 C.trachomatis:76

Q95108              	100.00%		O84544              	100.00%
Bootstrap support for Q95108 as seed ortholog is 72%.
Alternative seed ortholog is A0JNM2 (11 bits away from this cluster)
Bootstrap support for O84544 as seed ortholog is 100%.

Group of orthologs #163. Best score 75 bits
Score difference with first non-orthologous sequence - B.taurus:75 C.trachomatis:75

Q2KID2              	100.00%		O84703              	100.00%
Bootstrap support for Q2KID2 as seed ortholog is 100%.
Bootstrap support for O84703 as seed ortholog is 100%.

Group of orthologs #164. Best score 74 bits
Score difference with first non-orthologous sequence - B.taurus:74 C.trachomatis:74

Q6B860              	100.00%		O84792              	100.00%
F1MKI0              	88.04%		
Bootstrap support for Q6B860 as seed ortholog is 100%.
Bootstrap support for O84792 as seed ortholog is 100%.

Group of orthologs #165. Best score 72 bits
Score difference with first non-orthologous sequence - B.taurus:72 C.trachomatis:72

Q0VC80              	100.00%		O84139              	100.00%
Bootstrap support for Q0VC80 as seed ortholog is 100%.
Bootstrap support for O84139 as seed ortholog is 100%.

Group of orthologs #166. Best score 71 bits
Score difference with first non-orthologous sequence - B.taurus:24 C.trachomatis:71

Q2TA22              	100.00%		O84781              	100.00%
Q0VCZ8              	67.77%		
Q1LZF6              	59.51%		
F1MEX9              	17.99%		
F1MBW3              	17.26%		
E1BCN4              	7.23%		
Q2KHW5              	6.34%		
Bootstrap support for Q2TA22 as seed ortholog is 72%.
Alternative seed ortholog is F1MQX0 (24 bits away from this cluster)
Bootstrap support for O84781 as seed ortholog is 100%.

Group of orthologs #167. Best score 71 bits
Score difference with first non-orthologous sequence - B.taurus:71 C.trachomatis:71

Q3SZC1              	100.00%		P36424              	100.00%
Q0P5N5              	27.50%		
Q0G846              	23.61%		
Bootstrap support for Q3SZC1 as seed ortholog is 100%.
Bootstrap support for P36424 as seed ortholog is 100%.

Group of orthologs #168. Best score 70 bits
Score difference with first non-orthologous sequence - B.taurus:70 C.trachomatis:70

Q0P5I5              	100.00%		O84366              	100.00%
Bootstrap support for Q0P5I5 as seed ortholog is 100%.
Bootstrap support for O84366 as seed ortholog is 100%.

Group of orthologs #169. Best score 69 bits
Score difference with first non-orthologous sequence - B.taurus:5 C.trachomatis:69

Q0VC60              	100.00%		O84650              	100.00%
Bootstrap support for Q0VC60 as seed ortholog is 56%.
Alternative seed ortholog is A6QPA8 (5 bits away from this cluster)
Bootstrap support for O84650 as seed ortholog is 100%.

Group of orthologs #170. Best score 68 bits
Score difference with first non-orthologous sequence - B.taurus:15 C.trachomatis:68

Q3T057              	100.00%		P0CD81              	100.00%
G3MY15              	78.77%		
Bootstrap support for Q3T057 as seed ortholog is 72%.
Alternative seed ortholog is Q1JQ99 (15 bits away from this cluster)
Bootstrap support for P0CD81 as seed ortholog is 100%.

Group of orthologs #171. Best score 66 bits
Score difference with first non-orthologous sequence - B.taurus:66 C.trachomatis:66

P61603              	100.00%		P0C0Z8              	100.00%
Bootstrap support for P61603 as seed ortholog is 100%.
Bootstrap support for P0C0Z8 as seed ortholog is 100%.

Group of orthologs #172. Best score 66 bits
Score difference with first non-orthologous sequence - B.taurus:66 C.trachomatis:66

Q2TBR2              	100.00%		O84842              	100.00%
Bootstrap support for Q2TBR2 as seed ortholog is 100%.
Bootstrap support for O84842 as seed ortholog is 100%.

Group of orthologs #173. Best score 65 bits
Score difference with first non-orthologous sequence - B.taurus:65 C.trachomatis:65

Q3SYS1              	100.00%		O84127              	100.00%
Bootstrap support for Q3SYS1 as seed ortholog is 100%.
Bootstrap support for O84127 as seed ortholog is 100%.

Group of orthologs #174. Best score 65 bits
Score difference with first non-orthologous sequence - B.taurus:65 C.trachomatis:65

Q3T0R1              	100.00%		P0CE04              	100.00%
Bootstrap support for Q3T0R1 as seed ortholog is 100%.
Bootstrap support for P0CE04 as seed ortholog is 100%.

Group of orthologs #175. Best score 64 bits
Score difference with first non-orthologous sequence - B.taurus:64 C.trachomatis:64

E1BDC8              	100.00%		O84284              	100.00%
P20821              	100.00%		
F1MUV3              	95.37%		
F1MBI9              	95.02%		
E1BEA7              	88.97%		
E1BBV5              	75.44%		
Bootstrap support for E1BDC8 as seed ortholog is 100%.
Bootstrap support for P20821 as seed ortholog is 100%.
Bootstrap support for O84284 as seed ortholog is 100%.

Group of orthologs #176. Best score 64 bits
Score difference with first non-orthologous sequence - B.taurus:64 C.trachomatis:64

F1MP63              	100.00%		O84826              	100.00%
Q1LZ71              	23.61%		
Q32L53              	23.05%		
Q6QRN7              	21.19%		
Q58DU1              	10.59%		
Bootstrap support for F1MP63 as seed ortholog is 100%.
Bootstrap support for O84826 as seed ortholog is 100%.

Group of orthologs #177. Best score 64 bits
Score difference with first non-orthologous sequence - B.taurus:64 C.trachomatis:64

Q3T0X6              	100.00%		O84128              	100.00%
E1BAT6              	96.04%		
Bootstrap support for Q3T0X6 as seed ortholog is 100%.
Bootstrap support for O84128 as seed ortholog is 100%.

Group of orthologs #178. Best score 64 bits
Score difference with first non-orthologous sequence - B.taurus:64 C.trachomatis:64

Q3T0L3              	100.00%		P0CD84              	100.00%
G3X875              	31.34%		
Bootstrap support for Q3T0L3 as seed ortholog is 100%.
Bootstrap support for P0CD84 as seed ortholog is 100%.

Group of orthologs #179. Best score 63 bits
Score difference with first non-orthologous sequence - B.taurus:63 C.trachomatis:63

Q3T0J3              	100.00%		P0CD83              	100.00%
Bootstrap support for Q3T0J3 as seed ortholog is 100%.
Bootstrap support for P0CD83 as seed ortholog is 100%.

Group of orthologs #180. Best score 62 bits
Score difference with first non-orthologous sequence - B.taurus:62 C.trachomatis:62

F1N0P3              	100.00%		O84218              	100.00%
F1MUB4              	57.25%		
Bootstrap support for F1N0P3 as seed ortholog is 100%.
Bootstrap support for O84218 as seed ortholog is 100%.

Group of orthologs #181. Best score 62 bits
Score difference with first non-orthologous sequence - B.taurus:62 C.trachomatis:62

A6QPQ5              	100.00%		O84320              	100.00%
Bootstrap support for A6QPQ5 as seed ortholog is 100%.
Bootstrap support for O84320 as seed ortholog is 100%.

Group of orthologs #182. Best score 61 bits
Score difference with first non-orthologous sequence - B.taurus:61 C.trachomatis:61

A6H7J4              	100.00%		O84680              	100.00%
E1BDZ2              	72.34%		
Q2KIQ0              	18.72%		
Q3SWY6              	12.31%		
Q5E9Y0              	12.14%		
F1N5S6              	12.14%		
F1MYV9              	11.97%		
Q5E9L6              	11.64%		
A0JN96              	11.30%		
F1N5W5              	10.29%		
F1N332              	10.29%		
A5PJJ9              	9.78%		
F1MDA8              	9.78%		
Q2TA06              	9.78%		
Q5E9X2              	9.27%		
P48734              	8.94%		
Q08DX5              	8.94%		
E1BN72              	8.77%		
Q0VD16              	8.77%		
E1BI01              	8.60%		
F1N591              	8.43%		
F1MZF7              	7.93%		
A7MB74              	7.76%		
Q17QH2              	7.76%		
Q02399              	7.59%		
Q08E45              	7.59%		
A4IFH7              	7.59%		
E1BC36              	7.59%		
F1MG18              	7.59%		
E1BLQ5              	7.42%		
E1B9D1              	7.25%		
F1MWN0              	7.25%		
F1MY86              	7.25%		
P05131              	7.08%		
Q7YRC6              	7.08%		
F1MYJ4              	7.08%		
F1MWN2              	6.91%		
P00517              	6.75%		
A6QLF0              	6.75%		
A7MB69              	6.75%		
F1N1N4              	6.75%		
E1BFR5              	6.41%		
G5E677              	6.41%		
Q2HJF7              	6.41%		
Q01314              	6.24%		
E1BNA8              	6.24%		
F1N664              	5.90%		
A7YW25              	5.90%		
Q0V7M1              	5.90%		
F1MM73              	5.73%		
F1MCX5              	5.56%		
Q0P5A8              	5.56%		
F1N261              	5.56%		
A5PJP8              	5.56%		
F1MB23              	5.56%		
F1N4J5              	5.56%		
Q08DQ1              	5.56%		
Q3SZW1              	5.56%		
F6RLA2              	5.23%		
G3N136              	5.23%		
F1MKK7              	5.06%		
F1N2S7              	5.06%		
Q0VD22              	5.06%		
Bootstrap support for A6H7J4 as seed ortholog is 100%.
Bootstrap support for O84680 as seed ortholog is 100%.

Group of orthologs #183. Best score 61 bits
Score difference with first non-orthologous sequence - B.taurus:61 C.trachomatis:61

P26884              	100.00%		P26623              	100.00%
Q32PA9              	8.38%		
Bootstrap support for P26884 as seed ortholog is 100%.
Bootstrap support for P26623 as seed ortholog is 100%.

Group of orthologs #184. Best score 61 bits
Score difference with first non-orthologous sequence - B.taurus:61 C.trachomatis:61

Q0P5D8              	100.00%		O84557              	100.00%
Q0V8R7              	18.25%		
Bootstrap support for Q0P5D8 as seed ortholog is 100%.
Bootstrap support for O84557 as seed ortholog is 100%.

Group of orthologs #185. Best score 61 bits
Score difference with first non-orthologous sequence - B.taurus:61 C.trachomatis:61

Q32PI6              	100.00%		O84532              	100.00%
Bootstrap support for Q32PI6 as seed ortholog is 100%.
Bootstrap support for O84532 as seed ortholog is 100%.

Group of orthologs #186. Best score 59 bits
Score difference with first non-orthologous sequence - B.taurus:59 C.trachomatis:59

Q3ZCL6              	100.00%		O84379              	100.00%
Q0V8M6              	39.98%		
Q9TU26              	39.42%		
F1MDA3              	37.98%		
F1MYX6              	36.54%		
F1N5E3              	36.43%		
F1N2F8              	35.33%		
G3MXA4              	34.55%		
E1BCI3              	7.64%		
Bootstrap support for Q3ZCL6 as seed ortholog is 100%.
Bootstrap support for O84379 as seed ortholog is 100%.

Group of orthologs #187. Best score 59 bits
Score difference with first non-orthologous sequence - B.taurus:59 C.trachomatis:59

F1MS56              	100.00%		O84822              	100.00%
Q08DP0              	100.00%		
A6QNJ7              	69.50%		
Bootstrap support for F1MS56 as seed ortholog is 100%.
Bootstrap support for Q08DP0 as seed ortholog is 100%.
Bootstrap support for O84822 as seed ortholog is 100%.

Group of orthologs #188. Best score 59 bits
Score difference with first non-orthologous sequence - B.taurus:59 C.trachomatis:59

Q0P5G4              	100.00%		O84395              	100.00%
E1BI62              	45.07%		
Bootstrap support for Q0P5G4 as seed ortholog is 100%.
Bootstrap support for O84395 as seed ortholog is 100%.

Group of orthologs #189. Best score 59 bits
Score difference with first non-orthologous sequence - B.taurus:59 C.trachomatis:59

P82915              	100.00%		O84029              	100.00%
Bootstrap support for P82915 as seed ortholog is 100%.
Bootstrap support for O84029 as seed ortholog is 100%.

Group of orthologs #190. Best score 59 bits
Score difference with first non-orthologous sequence - B.taurus:59 C.trachomatis:59

Q32PC3              	100.00%		P66123              	100.00%
Bootstrap support for Q32PC3 as seed ortholog is 100%.
Bootstrap support for P66123 as seed ortholog is 100%.

Group of orthologs #191. Best score 57 bits
Score difference with first non-orthologous sequence - B.taurus:57 C.trachomatis:57

F1MMJ1              	100.00%		O84658              	100.00%
Bootstrap support for F1MMJ1 as seed ortholog is 100%.
Bootstrap support for O84658 as seed ortholog is 100%.

Group of orthologs #192. Best score 57 bits
Score difference with first non-orthologous sequence - B.taurus:57 C.trachomatis:57

Q56K10              	100.00%		P66480              	100.00%
Bootstrap support for Q56K10 as seed ortholog is 100%.
Bootstrap support for P66480 as seed ortholog is 100%.

Group of orthologs #193. Best score 56 bits
Score difference with first non-orthologous sequence - B.taurus:56 C.trachomatis:56

P56966              	100.00%		O84633              	100.00%
Bootstrap support for P56966 as seed ortholog is 100%.
Bootstrap support for O84633 as seed ortholog is 100%.

Group of orthologs #194. Best score 56 bits
Score difference with first non-orthologous sequence - B.taurus:56 C.trachomatis:56

Q3T169              	100.00%		O84527              	100.00%
Bootstrap support for Q3T169 as seed ortholog is 100%.
Bootstrap support for O84527 as seed ortholog is 100%.

Group of orthologs #195. Best score 56 bits
Score difference with first non-orthologous sequence - B.taurus:56 C.trachomatis:56

Q3ZBH8              	100.00%		P0CE02              	100.00%
Bootstrap support for Q3ZBH8 as seed ortholog is 100%.
Bootstrap support for P0CE02 as seed ortholog is 100%.

Group of orthologs #196. Best score 55 bits
Score difference with first non-orthologous sequence - B.taurus:55 C.trachomatis:55

Q32KZ1              	100.00%		O84840              	100.00%
Bootstrap support for Q32KZ1 as seed ortholog is 100%.
Bootstrap support for O84840 as seed ortholog is 100%.

Group of orthologs #197. Best score 54 bits
Score difference with first non-orthologous sequence - B.taurus:4 C.trachomatis:54

A1A4R8              	100.00%		O84689              	100.00%
Bootstrap support for A1A4R8 as seed ortholog is 48%.
Alternative seed ortholog is F1N4X0 (4 bits away from this cluster)
Bootstrap support for O84689 as seed ortholog is 100%.

Group of orthologs #198. Best score 52 bits
Score difference with first non-orthologous sequence - B.taurus:52 C.trachomatis:52

E1BE10              	100.00%		O84160              	100.00%
                    	       		O84159              	20.71%
                    	       		O84156              	12.62%
                    	       		O84086              	11.43%
                    	       		O84157              	5.71%
Bootstrap support for E1BE10 as seed ortholog is 100%.
Bootstrap support for O84160 as seed ortholog is 100%.

Group of orthologs #199. Best score 51 bits
Score difference with first non-orthologous sequence - B.taurus:51 C.trachomatis:51

G3N3X4              	100.00%		O84238              	100.00%
P00514              	90.89%		
P31322              	39.33%		
P00515              	37.65%		
Bootstrap support for G3N3X4 as seed ortholog is 100%.
Bootstrap support for O84238 as seed ortholog is 100%.

Group of orthologs #200. Best score 51 bits
Score difference with first non-orthologous sequence - B.taurus:51 C.trachomatis:51

Q2TBT5              	100.00%		O84032              	100.00%
Bootstrap support for Q2TBT5 as seed ortholog is 100%.
Bootstrap support for O84032 as seed ortholog is 100%.

Group of orthologs #201. Best score 50 bits
Score difference with first non-orthologous sequence - B.taurus:50 C.trachomatis:50

F1N1D2              	100.00%		P0CD80              	100.00%
Q2KJ94              	45.63%		
F1MW99              	7.61%		
E1BE93              	6.96%		
Q08DH8              	5.02%		
Bootstrap support for F1N1D2 as seed ortholog is 100%.
Bootstrap support for P0CD80 as seed ortholog is 100%.

Group of orthologs #202. Best score 45 bits
Score difference with first non-orthologous sequence - B.taurus:45 C.trachomatis:45

E1BJ23              	100.00%		O84459              	100.00%
Bootstrap support for E1BJ23 as seed ortholog is 100%.
Bootstrap support for O84459 as seed ortholog is 100%.

Group of orthologs #203. Best score 45 bits
Score difference with first non-orthologous sequence - B.taurus:45 C.trachomatis:45

P00376              	100.00%		O84618              	100.00%
Bootstrap support for P00376 as seed ortholog is 100%.
Bootstrap support for O84618 as seed ortholog is 100%.

Group of orthologs #204. Best score 45 bits
Score difference with first non-orthologous sequence - B.taurus:45 C.trachomatis:45

P82917              	100.00%		O84808              	100.00%
Bootstrap support for P82917 as seed ortholog is 100%.
Bootstrap support for O84808 as seed ortholog is 100%.

Group of orthologs #205. Best score 44 bits
Score difference with first non-orthologous sequence - B.taurus:44 C.trachomatis:44

P00366              	100.00%		O84778              	100.00%
Bootstrap support for P00366 as seed ortholog is 100%.
Bootstrap support for O84778 as seed ortholog is 100%.

Group of orthologs #206. Best score 44 bits
Score difference with first non-orthologous sequence - B.taurus:44 C.trachomatis:44

Q29RJ1              	100.00%		O84776              	100.00%
Bootstrap support for Q29RJ1 as seed ortholog is 100%.
Bootstrap support for O84776 as seed ortholog is 100%.

Group of orthologs #207. Best score 43 bits
Score difference with first non-orthologous sequence - B.taurus:43 C.trachomatis:43

Q2YDJ9              	100.00%		O84496              	100.00%
E1BEN4              	24.34%		
A5PJI7              	6.27%		
Bootstrap support for Q2YDJ9 as seed ortholog is 100%.
Bootstrap support for O84496 as seed ortholog is 100%.

Group of orthologs #208. Best score 42 bits
Score difference with first non-orthologous sequence - B.taurus:42 C.trachomatis:42

Q3ZCK3              	100.00%		O84779              	100.00%
Q2KJ53              	10.94%		
P21327              	7.12%		
Bootstrap support for Q3ZCK3 as seed ortholog is 100%.
Bootstrap support for O84779 as seed ortholog is 100%.

Group of orthologs #209. Best score 40 bits
Score difference with first non-orthologous sequence - B.taurus:40 C.trachomatis:40

Q5E9H9              	100.00%		O84151              	100.00%
                    	       		O84209              	7.10%
Bootstrap support for Q5E9H9 as seed ortholog is 100%.
Bootstrap support for O84151 as seed ortholog is 100%.