###################################
366 groups of orthologs
1111 in-paralogs from A.thaliana
405 in-paralogs from M.jannaschii
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 695 bits
Score difference with first non-orthologous sequence - A.thaliana:168 M.jannaschii:695

Q9SCN8              	100.00%		Q58556              	100.00%
Q9LZF6              	86.57%		
P54609              	84.18%		
Bootstrap support for Q9SCN8 as seed ortholog is 99%.
Bootstrap support for Q58556 as seed ortholog is 100%.

Group of orthologs #2. Best score 595 bits
Score difference with first non-orthologous sequence - A.thaliana:282 M.jannaschii:595

P20649              	100.00%		Q58623              	100.00%
P19456              	92.07%		
P20431              	83.67%		
Q42556              	77.39%		
Q9SJB3              	77.08%		
Q9SH76              	75.98%		
Q9M2A0              	74.96%		
Q9LV11              	73.31%		
Q9SU58              	71.90%		
Q9LY32              	62.32%		
Q43128              	58.16%		
Q9T0E0              	33.05%		
Bootstrap support for P20649 as seed ortholog is 100%.
Bootstrap support for Q58623 as seed ortholog is 100%.

Group of orthologs #3. Best score 585 bits
Score difference with first non-orthologous sequence - A.thaliana:443 M.jannaschii:585

O23654              	100.00%		Q57670              	100.00%
Bootstrap support for O23654 as seed ortholog is 100%.
Bootstrap support for Q57670 as seed ortholog is 100%.

Group of orthologs #4. Best score 577 bits
Score difference with first non-orthologous sequence - A.thaliana:577 M.jannaschii:577

Q42601              	100.00%		Q58776              	100.00%
Bootstrap support for Q42601 as seed ortholog is 100%.
Bootstrap support for Q58776 as seed ortholog is 100%.

Group of orthologs #5. Best score 559 bits
Score difference with first non-orthologous sequence - A.thaliana:456 M.jannaschii:559

Q8LPJ4              	100.00%		Q58129              	100.00%
Q9LID6              	66.46%		
Bootstrap support for Q8LPJ4 as seed ortholog is 100%.
Bootstrap support for Q58129 as seed ortholog is 100%.

Group of orthologs #6. Best score 558 bits
Score difference with first non-orthologous sequence - A.thaliana:558 M.jannaschii:558

F4I6G9              	100.00%		Q58574              	100.00%
Q0WRY1              	55.35%		
Q9LTW8              	54.74%		
O64753              	53.21%		
Q8L6Z9              	37.77%		
Bootstrap support for F4I6G9 as seed ortholog is 100%.
Bootstrap support for Q58574 as seed ortholog is 100%.

Group of orthologs #7. Best score 551 bits
Score difference with first non-orthologous sequence - A.thaliana:361 M.jannaschii:551

F4JXF8              	100.00%		Q58445              	100.00%
P18616              	7.50%		
Bootstrap support for F4JXF8 as seed ortholog is 100%.
Bootstrap support for Q58445 as seed ortholog is 100%.

Group of orthologs #8. Best score 549 bits
Score difference with first non-orthologous sequence - A.thaliana:413 M.jannaschii:549

Q9SZN1              	100.00%		Q57669              	100.00%
P11574              	89.37%		
Q8W4E2              	88.89%		
Bootstrap support for Q9SZN1 as seed ortholog is 100%.
Bootstrap support for Q57669 as seed ortholog is 100%.

Group of orthologs #9. Best score 539 bits
Score difference with first non-orthologous sequence - A.thaliana:539 M.jannaschii:539

Q9FNB0              	100.00%		Q58318              	100.00%
                    	       		Q58836              	10.56%
Bootstrap support for Q9FNB0 as seed ortholog is 100%.
Bootstrap support for Q58318 as seed ortholog is 100%.

Group of orthologs #10. Best score 513 bits
Score difference with first non-orthologous sequence - A.thaliana:513 M.jannaschii:513

P38420              	100.00%		Q60181              	100.00%
F4KD38              	10.05%		
Q9LK40              	7.14%		
Q9LV32              	5.87%		
Bootstrap support for P38420 as seed ortholog is 100%.
Bootstrap support for Q60181 as seed ortholog is 100%.

Group of orthologs #11. Best score 493 bits
Score difference with first non-orthologous sequence - A.thaliana:367 M.jannaschii:493

P14671              	100.00%		Q60179              	100.00%
P25269              	81.43%		
F4K727              	8.95%		
Bootstrap support for P14671 as seed ortholog is 100%.
Bootstrap support for Q60179 as seed ortholog is 100%.

Group of orthologs #12. Best score 491 bits
Score difference with first non-orthologous sequence - A.thaliana:63 M.jannaschii:491

O04983              	100.00%		Q58626              	100.00%
Bootstrap support for O04983 as seed ortholog is 96%.
Bootstrap support for Q58626 as seed ortholog is 100%.

Group of orthologs #13. Best score 487 bits
Score difference with first non-orthologous sequence - A.thaliana:91 M.jannaschii:487

F4JLM5              	100.00%		Q58357              	100.00%
Bootstrap support for F4JLM5 as seed ortholog is 91%.
Bootstrap support for Q58357 as seed ortholog is 100%.

Group of orthologs #14. Best score 474 bits
Score difference with first non-orthologous sequence - A.thaliana:99 M.jannaschii:474

Q9C9C4              	100.00%		Q60173              	100.00%
P25696              	21.46%		
Bootstrap support for Q9C9C4 as seed ortholog is 99%.
Bootstrap support for Q60173 as seed ortholog is 100%.

Group of orthologs #15. Best score 470 bits
Score difference with first non-orthologous sequence - A.thaliana:170 M.jannaschii:356

Q0WL56              	100.00%		Q57770              	100.00%
Q8GTY0              	100.00%		
Q8W4H7              	100.00%		
P0DH99              	100.00%		
Bootstrap support for Q0WL56 as seed ortholog is 100%.
Bootstrap support for Q8GTY0 as seed ortholog is 99%.
Bootstrap support for Q8W4H7 as seed ortholog is 99%.
Bootstrap support for P0DH99 as seed ortholog is 100%.
Bootstrap support for Q57770 as seed ortholog is 100%.

Group of orthologs #16. Best score 449 bits
Score difference with first non-orthologous sequence - A.thaliana:449 M.jannaschii:449

O23627              	100.00%		Q57681              	100.00%
Q9FXG2              	15.86%		
Bootstrap support for O23627 as seed ortholog is 100%.
Bootstrap support for Q57681 as seed ortholog is 100%.

Group of orthologs #17. Best score 449 bits
Score difference with first non-orthologous sequence - A.thaliana:241 M.jannaschii:312

P17597              	100.00%		Q57725              	100.00%
Bootstrap support for P17597 as seed ortholog is 99%.
Bootstrap support for Q57725 as seed ortholog is 100%.

Group of orthologs #18. Best score 445 bits
Score difference with first non-orthologous sequence - A.thaliana:123 M.jannaschii:445

Q9ASR1              	100.00%		Q58448              	100.00%
F4JB05              	86.65%		
Q9LNC5              	11.67%		
F4JWP9              	11.11%		
Bootstrap support for Q9ASR1 as seed ortholog is 98%.
Bootstrap support for Q58448 as seed ortholog is 100%.

Group of orthologs #19. Best score 445 bits
Score difference with first non-orthologous sequence - A.thaliana:445 M.jannaschii:445

Q9LIR4              	100.00%		Q58672              	100.00%
Bootstrap support for Q9LIR4 as seed ortholog is 100%.
Bootstrap support for Q58672 as seed ortholog is 100%.

Group of orthologs #20. Best score 434 bits
Score difference with first non-orthologous sequence - A.thaliana:434 M.jannaschii:434

Q93ZR1              	100.00%		Q58536              	100.00%
Bootstrap support for Q93ZR1 as seed ortholog is 100%.
Bootstrap support for Q58536 as seed ortholog is 100%.

Group of orthologs #21. Best score 425 bits
Score difference with first non-orthologous sequence - A.thaliana:273 M.jannaschii:425

F4I116              	100.00%		Q58050              	100.00%
Bootstrap support for F4I116 as seed ortholog is 99%.
Bootstrap support for Q58050 as seed ortholog is 100%.

Group of orthologs #22. Best score 405 bits
Score difference with first non-orthologous sequence - A.thaliana:36 M.jannaschii:405

O04450              	100.00%		Q58405              	100.00%
Bootstrap support for O04450 as seed ortholog is 78%.
Bootstrap support for Q58405 as seed ortholog is 100%.

Group of orthologs #23. Best score 404 bits
Score difference with first non-orthologous sequence - A.thaliana:275 M.jannaschii:328

Q42522              	100.00%		Q58020              	100.00%
P42799              	85.15%		
Bootstrap support for Q42522 as seed ortholog is 100%.
Bootstrap support for Q58020 as seed ortholog is 100%.

Group of orthologs #24. Best score 401 bits
Score difference with first non-orthologous sequence - A.thaliana:239 M.jannaschii:401

Q9LT69              	100.00%		Q58424              	100.00%
O49485              	67.93%		
O04130              	56.68%		
Bootstrap support for Q9LT69 as seed ortholog is 100%.
Bootstrap support for Q58424 as seed ortholog is 100%.

Group of orthologs #25. Best score 399 bits
Score difference with first non-orthologous sequence - A.thaliana:399 M.jannaschii:399

Q9SI61              	100.00%		Q57657              	100.00%
Q9STG9              	72.13%		
Q9T0J5              	37.84%		
Bootstrap support for Q9SI61 as seed ortholog is 100%.
Bootstrap support for Q57657 as seed ortholog is 100%.

Group of orthologs #26. Best score 390 bits
Score difference with first non-orthologous sequence - A.thaliana:84 M.jannaschii:390

F4KE63              	100.00%		Q58413              	100.00%
P93736              	15.80%		
Bootstrap support for F4KE63 as seed ortholog is 94%.
Bootstrap support for Q58413 as seed ortholog is 100%.

Group of orthologs #27. Best score 387 bits
Score difference with first non-orthologous sequence - A.thaliana:276 M.jannaschii:387

F4IRF5              	100.00%		Q58657              	100.00%
F4JQU1              	71.53%		
O64490              	66.17%		
Bootstrap support for F4IRF5 as seed ortholog is 100%.
Bootstrap support for Q58657 as seed ortholog is 100%.

Group of orthologs #28. Best score 385 bits
Score difference with first non-orthologous sequence - A.thaliana:226 M.jannaschii:385

C0SUW8              	100.00%		Q57710              	100.00%
F4I420              	51.61%		
F4I421              	48.39%		
F4I410              	45.16%		
Bootstrap support for C0SUW8 as seed ortholog is 100%.
Bootstrap support for Q57710 as seed ortholog is 100%.

Group of orthologs #29. Best score 381 bits
Score difference with first non-orthologous sequence - A.thaliana:18 M.jannaschii:229

Q9SL67              	100.00%		Q58576              	100.00%
Q9SZD4              	100.00%		
Bootstrap support for Q9SL67 as seed ortholog is 66%.
Alternative seed ortholog is Q9SEI2 (18 bits away from this cluster)
Bootstrap support for Q9SZD4 as seed ortholog is 65%.
Alternative seed ortholog is Q9SEI2 (18 bits away from this cluster)
Bootstrap support for Q58576 as seed ortholog is 100%.

Group of orthologs #30. Best score 376 bits
Score difference with first non-orthologous sequence - A.thaliana:311 M.jannaschii:376

Q9C550              	100.00%		Q58595              	100.00%
Q9LPR4              	100.00%		Q58787              	20.42%
Q9FG67              	21.20%		
Q9FN52              	20.05%		
Bootstrap support for Q9C550 as seed ortholog is 100%.
Bootstrap support for Q9LPR4 as seed ortholog is 100%.
Bootstrap support for Q58595 as seed ortholog is 100%.

Group of orthologs #31. Best score 373 bits
Score difference with first non-orthologous sequence - A.thaliana:42 M.jannaschii:373

Q6Q1P4              	100.00%		Q59037              	100.00%
Bootstrap support for Q6Q1P4 as seed ortholog is 67%.
Alternative seed ortholog is Q9FJL0 (42 bits away from this cluster)
Bootstrap support for Q59037 as seed ortholog is 100%.

Group of orthologs #32. Best score 363 bits
Score difference with first non-orthologous sequence - A.thaliana:363 M.jannaschii:363

Q94AR8              	100.00%		P81291              	100.00%
                    	       		Q58409              	7.14%
Bootstrap support for Q94AR8 as seed ortholog is 100%.
Bootstrap support for P81291 as seed ortholog is 100%.

Group of orthologs #33. Best score 362 bits
Score difference with first non-orthologous sequence - A.thaliana:362 M.jannaschii:362

Q9SVA6              	100.00%		Q58722              	100.00%
Q9LQK0              	16.54%		
Q9CAI1              	16.54%		
Bootstrap support for Q9SVA6 as seed ortholog is 100%.
Bootstrap support for Q58722 as seed ortholog is 100%.

Group of orthologs #34. Best score 362 bits
Score difference with first non-orthologous sequence - A.thaliana:151 M.jannaschii:362

Q9SVN5              	100.00%		Q58659              	100.00%
Bootstrap support for Q9SVN5 as seed ortholog is 99%.
Bootstrap support for Q58659 as seed ortholog is 100%.

Group of orthologs #35. Best score 352 bits
Score difference with first non-orthologous sequence - A.thaliana:352 M.jannaschii:352

Q5XF33              	100.00%		Q58321              	100.00%
P16127              	71.46%		
Bootstrap support for Q5XF33 as seed ortholog is 100%.
Bootstrap support for Q58321 as seed ortholog is 100%.

Group of orthologs #36. Best score 349 bits
Score difference with first non-orthologous sequence - A.thaliana:42 M.jannaschii:349

P49967              	100.00%		Q57565              	100.00%
P49966              	76.87%		
P37106              	75.28%		
Bootstrap support for P49967 as seed ortholog is 84%.
Bootstrap support for Q57565 as seed ortholog is 100%.

Group of orthologs #37. Best score 348 bits
Score difference with first non-orthologous sequence - A.thaliana:97 M.jannaschii:204

Q9M8M7              	100.00%		Q58131              	100.00%
Bootstrap support for Q9M8M7 as seed ortholog is 99%.
Bootstrap support for Q58131 as seed ortholog is 100%.

Group of orthologs #38. Best score 347 bits
Score difference with first non-orthologous sequence - A.thaliana:347 M.jannaschii:347

Q9SZX3              	100.00%		Q60174              	100.00%
Bootstrap support for Q9SZX3 as seed ortholog is 100%.
Bootstrap support for Q60174 as seed ortholog is 100%.

Group of orthologs #39. Best score 345 bits
Score difference with first non-orthologous sequence - A.thaliana:345 M.jannaschii:345

Q8L940              	100.00%		Q58090              	100.00%
O80448              	77.22%		
Bootstrap support for Q8L940 as seed ortholog is 100%.
Bootstrap support for Q58090 as seed ortholog is 100%.

Group of orthologs #40. Best score 337 bits
Score difference with first non-orthologous sequence - A.thaliana:337 M.jannaschii:337

O82392              	100.00%		Q58432              	100.00%
Bootstrap support for O82392 as seed ortholog is 100%.
Bootstrap support for Q58432 as seed ortholog is 100%.

Group of orthologs #41. Best score 326 bits
Score difference with first non-orthologous sequence - A.thaliana:326 M.jannaschii:326

Q9C5U8              	100.00%		Q58851              	100.00%
Bootstrap support for Q9C5U8 as seed ortholog is 100%.
Bootstrap support for Q58851 as seed ortholog is 100%.

Group of orthologs #42. Best score 322 bits
Score difference with first non-orthologous sequence - A.thaliana:322 M.jannaschii:322

O49653              	100.00%		Q58530              	100.00%
Bootstrap support for O49653 as seed ortholog is 100%.
Bootstrap support for Q58530 as seed ortholog is 100%.

Group of orthologs #43. Best score 311 bits
Score difference with first non-orthologous sequence - A.thaliana:311 M.jannaschii:311

P57720              	100.00%		Q58575              	100.00%
Bootstrap support for P57720 as seed ortholog is 100%.
Bootstrap support for Q58575 as seed ortholog is 100%.

Group of orthologs #44. Best score 309 bits
Score difference with first non-orthologous sequence - A.thaliana:6 M.jannaschii:309

O82663              	100.00%		Q60356              	100.00%
Q9ZPX5              	84.97%		
Bootstrap support for O82663 as seed ortholog is 55%.
Alternative seed ortholog is Q94AY1 (6 bits away from this cluster)
Bootstrap support for Q60356 as seed ortholog is 100%.

Group of orthologs #45. Best score 307 bits
Score difference with first non-orthologous sequence - A.thaliana:155 M.jannaschii:307

Q9LI77              	100.00%		Q58560              	100.00%
Bootstrap support for Q9LI77 as seed ortholog is 99%.
Bootstrap support for Q58560 as seed ortholog is 100%.

Group of orthologs #46. Best score 302 bits
Score difference with first non-orthologous sequence - A.thaliana:103 M.jannaschii:302

O81047              	100.00%		Q57568              	100.00%
F4K1G7              	5.70%		
Bootstrap support for O81047 as seed ortholog is 97%.
Bootstrap support for Q57568 as seed ortholog is 100%.

Group of orthologs #47. Best score 302 bits
Score difference with first non-orthologous sequence - A.thaliana:302 M.jannaschii:302

Q9FV81              	100.00%		Q57624              	100.00%
Bootstrap support for Q9FV81 as seed ortholog is 100%.
Bootstrap support for Q57624 as seed ortholog is 100%.

Group of orthologs #48. Best score 296 bits
Score difference with first non-orthologous sequence - A.thaliana:296 M.jannaschii:296

Q42545              	100.00%		Q57816              	100.00%
Q9LXJ0              	15.53%		Q58039              	11.00%
O82533              	15.15%		
Bootstrap support for Q42545 as seed ortholog is 100%.
Bootstrap support for Q57816 as seed ortholog is 100%.

Group of orthologs #49. Best score 295 bits
Score difference with first non-orthologous sequence - A.thaliana:295 M.jannaschii:295

O23255              	100.00%		Q58783              	100.00%
Q9LK36              	100.00%		
Bootstrap support for O23255 as seed ortholog is 100%.
Bootstrap support for Q9LK36 as seed ortholog is 100%.
Bootstrap support for Q58783 as seed ortholog is 100%.

Group of orthologs #50. Best score 293 bits
Score difference with first non-orthologous sequence - A.thaliana:293 M.jannaschii:293

P14891              	100.00%		Q58116              	100.00%
P43256              	52.22%		
Bootstrap support for P14891 as seed ortholog is 100%.
Bootstrap support for Q58116 as seed ortholog is 100%.

Group of orthologs #51. Best score 291 bits
Score difference with first non-orthologous sequence - A.thaliana:86 M.jannaschii:291

P32069              	100.00%		Q58475              	100.00%
P32068              	52.31%		
F4IY44              	41.51%		
Bootstrap support for P32069 as seed ortholog is 96%.
Bootstrap support for Q58475 as seed ortholog is 100%.

Group of orthologs #52. Best score 288 bits
Score difference with first non-orthologous sequence - A.thaliana:288 M.jannaschii:288

P49077              	100.00%		Q58976              	100.00%
Bootstrap support for P49077 as seed ortholog is 100%.
Bootstrap support for Q58976 as seed ortholog is 100%.

Group of orthologs #53. Best score 288 bits
Score difference with first non-orthologous sequence - A.thaliana:231 M.jannaschii:288

Q9LEU8              	100.00%		Q58201              	100.00%
Bootstrap support for Q9LEU8 as seed ortholog is 100%.
Bootstrap support for Q58201 as seed ortholog is 100%.

Group of orthologs #54. Best score 287 bits
Score difference with first non-orthologous sequence - A.thaliana:287 M.jannaschii:287

Q9FI94              	100.00%		Q58224              	100.00%
Bootstrap support for Q9FI94 as seed ortholog is 100%.
Bootstrap support for Q58224 as seed ortholog is 100%.

Group of orthologs #55. Best score 287 bits
Score difference with first non-orthologous sequence - A.thaliana:287 M.jannaschii:287

Q9ZUR7              	100.00%		Q57645              	100.00%
Bootstrap support for Q9ZUR7 as seed ortholog is 100%.
Bootstrap support for Q57645 as seed ortholog is 100%.

Group of orthologs #56. Best score 285 bits
Score difference with first non-orthologous sequence - A.thaliana:285 M.jannaschii:285

Q9LVW7              	100.00%		Q58425              	100.00%
Bootstrap support for Q9LVW7 as seed ortholog is 100%.
Bootstrap support for Q58425 as seed ortholog is 100%.

Group of orthologs #57. Best score 284 bits
Score difference with first non-orthologous sequence - A.thaliana:27 M.jannaschii:284

Q9SAK4              	100.00%		Q58806              	100.00%
Q9SU63              	8.16%		
Q9STS1              	7.75%		
Q9S795              	7.22%		
Q8S528              	6.95%		
Q56YU0              	5.08%		
Bootstrap support for Q9SAK4 as seed ortholog is 69%.
Alternative seed ortholog is Q1WIQ6 (27 bits away from this cluster)
Bootstrap support for Q58806 as seed ortholog is 100%.

Group of orthologs #58. Best score 283 bits
Score difference with first non-orthologous sequence - A.thaliana:156 M.jannaschii:283

Q9FYR6              	100.00%		Q58635              	100.00%
Q9M1R2              	13.46%		
Bootstrap support for Q9FYR6 as seed ortholog is 99%.
Bootstrap support for Q58635 as seed ortholog is 100%.

Group of orthologs #59. Best score 282 bits
Score difference with first non-orthologous sequence - A.thaliana:282 M.jannaschii:282

P68209              	100.00%		Q58643              	100.00%
Q8LAD2              	100.00%		
Bootstrap support for P68209 as seed ortholog is 100%.
Bootstrap support for Q8LAD2 as seed ortholog is 100%.
Bootstrap support for Q58643 as seed ortholog is 100%.

Group of orthologs #60. Best score 277 bits
Score difference with first non-orthologous sequence - A.thaliana:277 M.jannaschii:277

Q9SFH9              	100.00%		Q60178              	100.00%
Q94LA4              	42.83%		
Bootstrap support for Q9SFH9 as seed ortholog is 100%.
Bootstrap support for Q60178 as seed ortholog is 100%.

Group of orthologs #61. Best score 275 bits
Score difference with first non-orthologous sequence - A.thaliana:156 M.jannaschii:231

Q9M0B6              	100.00%		Q58455              	100.00%
Q9LPC1              	54.65%		
O81312              	53.30%		
O22141              	52.62%		
Q9STI6              	49.07%		
Q9LIS3              	46.02%		
Bootstrap support for Q9M0B6 as seed ortholog is 99%.
Bootstrap support for Q58455 as seed ortholog is 100%.

Group of orthologs #62. Best score 275 bits
Score difference with first non-orthologous sequence - A.thaliana:275 M.jannaschii:275

Q9LD90              	100.00%		Q57612              	100.00%
Bootstrap support for Q9LD90 as seed ortholog is 100%.
Bootstrap support for Q57612 as seed ortholog is 100%.

Group of orthologs #63. Best score 274 bits
Score difference with first non-orthologous sequence - A.thaliana:274 M.jannaschii:274

O03042              	100.00%		Q58632              	100.00%
Bootstrap support for O03042 as seed ortholog is 100%.
Bootstrap support for Q58632 as seed ortholog is 100%.

Group of orthologs #64. Best score 272 bits
Score difference with first non-orthologous sequence - A.thaliana:272 M.jannaschii:272

O80774              	100.00%		Q60175              	100.00%
Q9ZV90              	100.00%		
Q8RWJ5              	99.39%		
Bootstrap support for O80774 as seed ortholog is 100%.
Bootstrap support for Q9ZV90 as seed ortholog is 100%.
Bootstrap support for Q60175 as seed ortholog is 100%.

Group of orthologs #65. Best score 272 bits
Score difference with first non-orthologous sequence - A.thaliana:92 M.jannaschii:272

Q8H104              	100.00%		Q58950              	100.00%
Q9M084              	66.45%		
Bootstrap support for Q8H104 as seed ortholog is 98%.
Bootstrap support for Q58950 as seed ortholog is 100%.

Group of orthologs #66. Best score 272 bits
Score difference with first non-orthologous sequence - A.thaliana:196 M.jannaschii:272

Q9S7B5              	100.00%		Q58860              	100.00%
Q9SSP5              	68.98%		
Bootstrap support for Q9S7B5 as seed ortholog is 100%.
Bootstrap support for Q58860 as seed ortholog is 100%.

Group of orthologs #67. Best score 271 bits
Score difference with first non-orthologous sequence - A.thaliana:271 M.jannaschii:271

Q9FIZ7              	100.00%		Q58374              	100.00%
Bootstrap support for Q9FIZ7 as seed ortholog is 100%.
Bootstrap support for Q58374 as seed ortholog is 100%.

Group of orthologs #68. Best score 270 bits
Score difference with first non-orthologous sequence - A.thaliana:270 M.jannaschii:270

Q93Z70              	100.00%		Q58496              	100.00%
Bootstrap support for Q93Z70 as seed ortholog is 100%.
Bootstrap support for Q58496 as seed ortholog is 100%.

Group of orthologs #69. Best score 267 bits
Score difference with first non-orthologous sequence - A.thaliana:267 M.jannaschii:267

Q9CAD1              	100.00%		Q58531              	100.00%
Bootstrap support for Q9CAD1 as seed ortholog is 100%.
Bootstrap support for Q58531 as seed ortholog is 100%.

Group of orthologs #70. Best score 265 bits
Score difference with first non-orthologous sequence - A.thaliana:265 M.jannaschii:265

Q9LYU8              	100.00%		Q57991              	100.00%
Q9SA18              	100.00%		
O81852              	74.11%		
Q9S702              	54.89%		
O23653              	54.18%		
Bootstrap support for Q9LYU8 as seed ortholog is 100%.
Bootstrap support for Q9SA18 as seed ortholog is 100%.
Bootstrap support for Q57991 as seed ortholog is 100%.

Group of orthologs #71. Best score 257 bits
Score difference with first non-orthologous sequence - A.thaliana:257 M.jannaschii:257

Q9T034              	100.00%		Q57911              	100.00%
Bootstrap support for Q9T034 as seed ortholog is 100%.
Bootstrap support for Q57911 as seed ortholog is 100%.

Group of orthologs #72. Best score 253 bits
Score difference with first non-orthologous sequence - A.thaliana:253 M.jannaschii:253

Q9SGE9              	100.00%		Q58508              	100.00%
Bootstrap support for Q9SGE9 as seed ortholog is 100%.
Bootstrap support for Q58508 as seed ortholog is 100%.

Group of orthologs #73. Best score 248 bits
Score difference with first non-orthologous sequence - A.thaliana:7 M.jannaschii:248

Q9C8J1              	100.00%		Q58083              	100.00%
Q94A52              	67.67%		
P41376              	37.24%		
Q9CAI7              	37.05%		
P41377              	36.86%		
Q8RXK6              	5.10%		
Bootstrap support for Q9C8J1 as seed ortholog is 62%.
Alternative seed ortholog is Q8W4R3 (7 bits away from this cluster)
Bootstrap support for Q58083 as seed ortholog is 100%.

Group of orthologs #74. Best score 248 bits
Score difference with first non-orthologous sequence - A.thaliana:248 M.jannaschii:248

Q9FFC7              	100.00%		Q57984              	100.00%
P36428              	14.27%		
Bootstrap support for Q9FFC7 as seed ortholog is 100%.
Bootstrap support for Q57984 as seed ortholog is 100%.

Group of orthologs #75. Best score 247 bits
Score difference with first non-orthologous sequence - A.thaliana:247 M.jannaschii:247

B9DHA5              	100.00%		Q58646              	100.00%
Bootstrap support for B9DHA5 as seed ortholog is 100%.
Bootstrap support for Q58646 as seed ortholog is 100%.

Group of orthologs #76. Best score 245 bits
Score difference with first non-orthologous sequence - A.thaliana:245 M.jannaschii:245

Q9SRK7              	100.00%		Q57772              	100.00%
Q84MA8              	34.19%		
Bootstrap support for Q9SRK7 as seed ortholog is 100%.
Bootstrap support for Q57772 as seed ortholog is 100%.

Group of orthologs #77. Best score 244 bits
Score difference with first non-orthologous sequence - A.thaliana:244 M.jannaschii:244

O50039              	100.00%		Q58291              	100.00%
Bootstrap support for O50039 as seed ortholog is 100%.
Bootstrap support for Q58291 as seed ortholog is 100%.

Group of orthologs #78. Best score 243 bits
Score difference with first non-orthologous sequence - A.thaliana:243 M.jannaschii:243

Q94A94              	100.00%		Q58497              	100.00%
Q949X7              	89.92%		
Bootstrap support for Q94A94 as seed ortholog is 100%.
Bootstrap support for Q58497 as seed ortholog is 100%.

Group of orthologs #79. Best score 243 bits
Score difference with first non-orthologous sequence - A.thaliana:95 M.jannaschii:167

P94102              	100.00%		Q49593              	100.00%
Bootstrap support for P94102 as seed ortholog is 99%.
Bootstrap support for Q49593 as seed ortholog is 100%.

Group of orthologs #80. Best score 242 bits
Score difference with first non-orthologous sequence - A.thaliana:242 M.jannaschii:102

Q9LHK9              	100.00%		Q59007              	100.00%
F4JK17              	87.80%		
Bootstrap support for Q9LHK9 as seed ortholog is 100%.
Bootstrap support for Q59007 as seed ortholog is 98%.

Group of orthologs #81. Best score 236 bits
Score difference with first non-orthologous sequence - A.thaliana:141 M.jannaschii:99

Q9ZUG4              	100.00%		Q57896              	100.00%
Bootstrap support for Q9ZUG4 as seed ortholog is 99%.
Bootstrap support for Q57896 as seed ortholog is 99%.

Group of orthologs #82. Best score 233 bits
Score difference with first non-orthologous sequence - A.thaliana:26 M.jannaschii:233

Q8H1Q2              	100.00%		Q57731              	100.00%
Bootstrap support for Q8H1Q2 as seed ortholog is 75%.
Bootstrap support for Q57731 as seed ortholog is 100%.

Group of orthologs #83. Best score 232 bits
Score difference with first non-orthologous sequence - A.thaliana:98 M.jannaschii:232

Q4PSL7              	100.00%		P54017              	100.00%
Q42064              	79.33%		
P46286              	78.33%		
Bootstrap support for Q4PSL7 as seed ortholog is 99%.
Bootstrap support for P54017 as seed ortholog is 100%.

Group of orthologs #84. Best score 228 bits
Score difference with first non-orthologous sequence - A.thaliana:26 M.jannaschii:228

Q945K7              	100.00%		Q58130              	100.00%
Q8LG77              	83.56%		Q58991              	17.44%
Q8LFC0              	20.89%		
O81796              	18.18%		
P93032              	17.79%		
Bootstrap support for Q945K7 as seed ortholog is 75%.
Bootstrap support for Q58130 as seed ortholog is 100%.

Group of orthologs #85. Best score 228 bits
Score difference with first non-orthologous sequence - A.thaliana:228 M.jannaschii:228

P05466              	100.00%		Q57925              	100.00%
Q9FVP6              	85.39%		
Bootstrap support for P05466 as seed ortholog is 100%.
Bootstrap support for Q57925 as seed ortholog is 100%.

Group of orthologs #86. Best score 227 bits
Score difference with first non-orthologous sequence - A.thaliana:227 M.jannaschii:227

Q8GUU3              	100.00%		Q58633              	100.00%
Q9C952              	7.13%		Q57626              	6.81%
Bootstrap support for Q8GUU3 as seed ortholog is 100%.
Bootstrap support for Q58633 as seed ortholog is 100%.

Group of orthologs #87. Best score 227 bits
Score difference with first non-orthologous sequence - A.thaliana:227 M.jannaschii:227

Q9SAJ4              	100.00%		Q58058              	100.00%
P50318              	80.47%		
Q9LD57              	80.11%		
Bootstrap support for Q9SAJ4 as seed ortholog is 100%.
Bootstrap support for Q58058 as seed ortholog is 100%.

Group of orthologs #88. Best score 225 bits
Score difference with first non-orthologous sequence - A.thaliana:225 M.jannaschii:225

O82413              	100.00%		Q58406              	100.00%
F4KFB0              	32.30%		
Bootstrap support for O82413 as seed ortholog is 100%.
Bootstrap support for Q58406 as seed ortholog is 100%.

Group of orthologs #89. Best score 223 bits
Score difference with first non-orthologous sequence - A.thaliana:22 M.jannaschii:113

Q9SIE1              	100.00%		Q60317              	100.00%
                    	       		Q58097              	10.75%
Bootstrap support for Q9SIE1 as seed ortholog is 71%.
Alternative seed ortholog is Q9CAP1 (22 bits away from this cluster)
Bootstrap support for Q60317 as seed ortholog is 99%.

Group of orthologs #90. Best score 220 bits
Score difference with first non-orthologous sequence - A.thaliana:123 M.jannaschii:220

P0DI07              	100.00%		Q58365              	100.00%
B9DHD3              	100.00%		
Bootstrap support for P0DI07 as seed ortholog is 99%.
Bootstrap support for B9DHD3 as seed ortholog is 99%.
Bootstrap support for Q58365 as seed ortholog is 100%.

Group of orthologs #91. Best score 220 bits
Score difference with first non-orthologous sequence - A.thaliana:220 M.jannaschii:166

Q05728              	100.00%		Q57656              	100.00%
Bootstrap support for Q05728 as seed ortholog is 100%.
Bootstrap support for Q57656 as seed ortholog is 99%.

Group of orthologs #92. Best score 220 bits
Score difference with first non-orthologous sequence - A.thaliana:168 M.jannaschii:220

Q56YA5              	100.00%		Q58369              	100.00%
Bootstrap support for Q56YA5 as seed ortholog is 99%.
Bootstrap support for Q58369 as seed ortholog is 100%.

Group of orthologs #93. Best score 218 bits
Score difference with first non-orthologous sequence - A.thaliana:218 M.jannaschii:218

Q9FL33              	100.00%		Q58884              	100.00%
P43299              	9.97%		Q58371              	23.98%
Q9LPD9              	9.06%		Q57809              	19.09%
Q0WVF5              	8.83%		Q60275              	7.99%
O80786              	8.68%		
F4KAB8              	7.23%		
Bootstrap support for Q9FL33 as seed ortholog is 100%.
Bootstrap support for Q58884 as seed ortholog is 100%.

Group of orthologs #94. Best score 218 bits
Score difference with first non-orthologous sequence - A.thaliana:218 M.jannaschii:218

P22738              	100.00%		P54014              	100.00%
P17094              	83.53%		
Bootstrap support for P22738 as seed ortholog is 100%.
Bootstrap support for P54014 as seed ortholog is 100%.

Group of orthologs #95. Best score 218 bits
Score difference with first non-orthologous sequence - A.thaliana:218 M.jannaschii:218

O65251              	100.00%		Q58839              	100.00%
Bootstrap support for O65251 as seed ortholog is 100%.
Bootstrap support for Q58839 as seed ortholog is 100%.

Group of orthologs #96. Best score 218 bits
Score difference with first non-orthologous sequence - A.thaliana:35 M.jannaschii:218

Q9M0A0              	100.00%		Q57739              	100.00%
Bootstrap support for Q9M0A0 as seed ortholog is 83%.
Bootstrap support for Q57739 as seed ortholog is 100%.

Group of orthologs #97. Best score 217 bits
Score difference with first non-orthologous sequence - A.thaliana:51 M.jannaschii:217

O82462              	100.00%		Q58772              	100.00%
Bootstrap support for O82462 as seed ortholog is 86%.
Bootstrap support for Q58772 as seed ortholog is 100%.

Group of orthologs #98. Best score 216 bits
Score difference with first non-orthologous sequence - A.thaliana:120 M.jannaschii:216

O82662              	100.00%		Q57663              	100.00%
Bootstrap support for O82662 as seed ortholog is 99%.
Bootstrap support for Q57663 as seed ortholog is 100%.

Group of orthologs #99. Best score 215 bits
Score difference with first non-orthologous sequence - A.thaliana:215 M.jannaschii:215

P35614              	100.00%		Q58239              	100.00%
Q9LPV8              	93.56%		
Q39097              	82.52%		
Bootstrap support for P35614 as seed ortholog is 100%.
Bootstrap support for Q58239 as seed ortholog is 100%.

Group of orthologs #100. Best score 215 bits
Score difference with first non-orthologous sequence - A.thaliana:215 M.jannaschii:215

Q9LVP1              	100.00%		Q59046              	100.00%
F4ISQ7              	11.74%		
Bootstrap support for Q9LVP1 as seed ortholog is 100%.
Bootstrap support for Q59046 as seed ortholog is 100%.

Group of orthologs #101. Best score 213 bits
Score difference with first non-orthologous sequence - A.thaliana:213 M.jannaschii:213

Q94JQ3              	100.00%		Q58992              	100.00%
Q9SZJ5              	42.79%		
Q94C74              	41.84%		
O23254              	38.97%		
Q9SVM4              	36.83%		
Q9LM59              	30.99%		
Q84WV0              	30.63%		
Bootstrap support for Q94JQ3 as seed ortholog is 100%.
Bootstrap support for Q58992 as seed ortholog is 100%.

Group of orthologs #102. Best score 213 bits
Score difference with first non-orthologous sequence - A.thaliana:213 M.jannaschii:213

O22765              	100.00%		Q60180              	100.00%
Q42529              	61.32%		
Bootstrap support for O22765 as seed ortholog is 100%.
Bootstrap support for Q60180 as seed ortholog is 100%.

Group of orthologs #103. Best score 211 bits
Score difference with first non-orthologous sequence - A.thaliana:211 M.jannaschii:211

Q9FFP6              	100.00%		Q57572              	100.00%
Q9FNN1              	92.24%		
Q9FM97              	72.39%		
O65595              	70.10%		
Q9SQQ7              	60.94%		
Q9LU95              	58.65%		
Q9M057              	58.52%		
Q9M044              	52.16%		
Q9SJQ0              	21.37%		
Q94KE3              	21.25%		
Q93Z53              	7.38%		
Q9FLW9              	5.85%		
Bootstrap support for Q9FFP6 as seed ortholog is 100%.
Bootstrap support for Q57572 as seed ortholog is 100%.

Group of orthologs #104. Best score 207 bits
Score difference with first non-orthologous sequence - A.thaliana:67 M.jannaschii:207

Q570Q8              	100.00%		Q58767              	100.00%
Q8RX73              	36.52%		
O80458              	29.47%		
Q8GY03              	26.95%		
Q56Y11              	16.12%		
F4IMI8              	14.86%		
Bootstrap support for Q570Q8 as seed ortholog is 95%.
Bootstrap support for Q58767 as seed ortholog is 100%.

Group of orthologs #105. Best score 207 bits
Score difference with first non-orthologous sequence - A.thaliana:38 M.jannaschii:207

O48661              	100.00%		Q57761              	100.00%
Q9ZUB3              	78.05%		
Q94BN2              	44.31%		
Bootstrap support for O48661 as seed ortholog is 86%.
Bootstrap support for Q57761 as seed ortholog is 100%.

Group of orthologs #106. Best score 207 bits
Score difference with first non-orthologous sequence - A.thaliana:207 M.jannaschii:207

O81769              	100.00%		Q58670              	100.00%
Bootstrap support for O81769 as seed ortholog is 100%.
Bootstrap support for Q58670 as seed ortholog is 100%.

Group of orthologs #107. Best score 207 bits
Score difference with first non-orthologous sequence - A.thaliana:207 M.jannaschii:207

Q9LTX7              	100.00%		Q59020              	100.00%
Bootstrap support for Q9LTX7 as seed ortholog is 100%.
Bootstrap support for Q59020 as seed ortholog is 100%.

Group of orthologs #108. Best score 204 bits
Score difference with first non-orthologous sequence - A.thaliana:56 M.jannaschii:204

Q9C7H2              	100.00%		Q58277              	100.00%
Bootstrap support for Q9C7H2 as seed ortholog is 88%.
Bootstrap support for Q58277 as seed ortholog is 100%.

Group of orthologs #109. Best score 201 bits
Score difference with first non-orthologous sequence - A.thaliana:201 M.jannaschii:201

P52420              	100.00%		Q58347              	100.00%
Bootstrap support for P52420 as seed ortholog is 100%.
Bootstrap support for Q58347 as seed ortholog is 100%.

Group of orthologs #110. Best score 200 bits
Score difference with first non-orthologous sequence - A.thaliana:7 M.jannaschii:200

Q949M9              	100.00%		Q58542              	100.00%
Bootstrap support for Q949M9 as seed ortholog is 77%.
Bootstrap support for Q58542 as seed ortholog is 100%.

Group of orthologs #111. Best score 199 bits
Score difference with first non-orthologous sequence - A.thaliana:199 M.jannaschii:199

O23515              	100.00%		P54060              	100.00%
Q8VYF1              	100.00%		
Bootstrap support for O23515 as seed ortholog is 100%.
Bootstrap support for Q8VYF1 as seed ortholog is 100%.
Bootstrap support for P54060 as seed ortholog is 100%.

Group of orthologs #112. Best score 198 bits
Score difference with first non-orthologous sequence - A.thaliana:4 M.jannaschii:198

O81148              	100.00%		Q60177              	100.00%
F4JJE5              	56.71%		
Bootstrap support for O81148 as seed ortholog is 54%.
Alternative seed ortholog is O81149 (4 bits away from this cluster)
Bootstrap support for Q60177 as seed ortholog is 100%.

Group of orthologs #113. Best score 197 bits
Score difference with first non-orthologous sequence - A.thaliana:197 M.jannaschii:197

Q9LFG2              	100.00%		Q58519              	100.00%
Bootstrap support for Q9LFG2 as seed ortholog is 100%.
Bootstrap support for Q58519 as seed ortholog is 100%.

Group of orthologs #114. Best score 194 bits
Score difference with first non-orthologous sequence - A.thaliana:31 M.jannaschii:194

Q2QKD2              	100.00%		Q58694              	100.00%
Bootstrap support for Q2QKD2 as seed ortholog is 77%.
Bootstrap support for Q58694 as seed ortholog is 100%.

Group of orthologs #115. Best score 192 bits
Score difference with first non-orthologous sequence - A.thaliana:192 M.jannaschii:192

Q42572              	100.00%		Q57635              	100.00%
F4I1P7              	56.65%		
Bootstrap support for Q42572 as seed ortholog is 100%.
Bootstrap support for Q57635 as seed ortholog is 100%.

Group of orthologs #116. Best score 187 bits
Score difference with first non-orthologous sequence - A.thaliana:187 M.jannaschii:187

Q9SZ30              	100.00%		Q57854              	100.00%
Bootstrap support for Q9SZ30 as seed ortholog is 100%.
Bootstrap support for Q57854 as seed ortholog is 100%.

Group of orthologs #117. Best score 186 bits
Score difference with first non-orthologous sequence - A.thaliana:32 M.jannaschii:186

Q94AH9              	100.00%		Q58108              	100.00%
Q9FEF8              	100.00%		
Bootstrap support for Q94AH9 as seed ortholog is 89%.
Bootstrap support for Q9FEF8 as seed ortholog is 88%.
Bootstrap support for Q58108 as seed ortholog is 100%.

Group of orthologs #118. Best score 186 bits
Score difference with first non-orthologous sequence - A.thaliana:186 M.jannaschii:70

Q42606              	100.00%		Q58375              	100.00%
Bootstrap support for Q42606 as seed ortholog is 100%.
Bootstrap support for Q58375 as seed ortholog is 98%.

Group of orthologs #119. Best score 185 bits
Score difference with first non-orthologous sequence - A.thaliana:70 M.jannaschii:185

Q9MAB3              	100.00%		Q58105              	100.00%
Q9SGT7              	100.00%		
O04658              	80.00%		
Q9LTV0              	78.47%		
O04656              	40.47%		
Bootstrap support for Q9MAB3 as seed ortholog is 99%.
Bootstrap support for Q9SGT7 as seed ortholog is 98%.
Bootstrap support for Q58105 as seed ortholog is 100%.

Group of orthologs #120. Best score 182 bits
Score difference with first non-orthologous sequence - A.thaliana:93 M.jannaschii:45

Q9LFU1              	100.00%		Q58516              	100.00%
Q9LV77              	91.02%		
P49078              	75.52%		
Bootstrap support for Q9LFU1 as seed ortholog is 91%.
Bootstrap support for Q58516 as seed ortholog is 77%.

Group of orthologs #121. Best score 181 bits
Score difference with first non-orthologous sequence - A.thaliana:61 M.jannaschii:181

Q9ASR4              	100.00%		Q58414              	100.00%
Q8W0Z7              	87.47%		
Bootstrap support for Q9ASR4 as seed ortholog is 96%.
Bootstrap support for Q58414 as seed ortholog is 100%.

Group of orthologs #122. Best score 181 bits
Score difference with first non-orthologous sequence - A.thaliana:181 M.jannaschii:181

Q9FJM0              	100.00%		Q58526              	100.00%
Bootstrap support for Q9FJM0 as seed ortholog is 100%.
Bootstrap support for Q58526 as seed ortholog is 100%.

Group of orthologs #123. Best score 179 bits
Score difference with first non-orthologous sequence - A.thaliana:86 M.jannaschii:179

Q9ZPJ8              	100.00%		Q58739              	100.00%
P54144              	65.94%		Q60366              	18.55%
Q9SQH9              	65.01%		
Q9SVT8              	64.78%		
Q9LK16              	64.32%		
Bootstrap support for Q9ZPJ8 as seed ortholog is 97%.
Bootstrap support for Q58739 as seed ortholog is 100%.

Group of orthologs #124. Best score 179 bits
Score difference with first non-orthologous sequence - A.thaliana:179 M.jannaschii:179

Q8S9J2              	100.00%		Q57834              	100.00%
F4HWL4              	73.96%		
Bootstrap support for Q8S9J2 as seed ortholog is 100%.
Bootstrap support for Q57834 as seed ortholog is 100%.

Group of orthologs #125. Best score 177 bits
Score difference with first non-orthologous sequence - A.thaliana:177 M.jannaschii:177

Q9C5V6              	100.00%		Q58434              	100.00%
Bootstrap support for Q9C5V6 as seed ortholog is 100%.
Bootstrap support for Q58434 as seed ortholog is 100%.

Group of orthologs #126. Best score 176 bits
Score difference with first non-orthologous sequence - A.thaliana:118 M.jannaschii:176

Q9ZUT9              	100.00%		P54063              	100.00%
P51427              	93.36%		
Bootstrap support for Q9ZUT9 as seed ortholog is 100%.
Bootstrap support for P54063 as seed ortholog is 100%.

Group of orthologs #127. Best score 176 bits
Score difference with first non-orthologous sequence - A.thaliana:176 M.jannaschii:176

Q96529              	100.00%		Q57981              	100.00%
Bootstrap support for Q96529 as seed ortholog is 100%.
Bootstrap support for Q57981 as seed ortholog is 100%.

Group of orthologs #128. Best score 175 bits
Score difference with first non-orthologous sequence - A.thaliana:34 M.jannaschii:175

Q9SAU2              	100.00%		Q58093              	100.00%
Bootstrap support for Q9SAU2 as seed ortholog is 87%.
Bootstrap support for Q58093 as seed ortholog is 100%.

Group of orthologs #129. Best score 174 bits
Score difference with first non-orthologous sequence - A.thaliana:69 M.jannaschii:174

Q9FV49              	100.00%		Q58725              	100.00%
Q56Y85              	81.54%		
Bootstrap support for Q9FV49 as seed ortholog is 98%.
Bootstrap support for Q58725 as seed ortholog is 100%.

Group of orthologs #130. Best score 173 bits
Score difference with first non-orthologous sequence - A.thaliana:173 M.jannaschii:173

Q43316              	100.00%		Q57989              	100.00%
Bootstrap support for Q43316 as seed ortholog is 100%.
Bootstrap support for Q57989 as seed ortholog is 100%.

Group of orthologs #131. Best score 173 bits
Score difference with first non-orthologous sequence - A.thaliana:108 M.jannaschii:173

Q5D892              	100.00%		Q58524              	100.00%
Bootstrap support for Q5D892 as seed ortholog is 98%.
Bootstrap support for Q58524 as seed ortholog is 100%.

Group of orthologs #132. Best score 172 bits
Score difference with first non-orthologous sequence - A.thaliana:172 M.jannaschii:172

Q9LVN7              	100.00%		Q58295              	100.00%
F4HTM5              	9.19%		
Bootstrap support for Q9LVN7 as seed ortholog is 100%.
Bootstrap support for Q58295 as seed ortholog is 100%.

Group of orthologs #133. Best score 170 bits
Score difference with first non-orthologous sequence - A.thaliana:79 M.jannaschii:170

Q9SCM3              	100.00%		P54045              	100.00%
Q8L8Y0              	81.75%		
Q93VB8              	81.75%		
P49688              	79.69%		
Bootstrap support for Q9SCM3 as seed ortholog is 99%.
Bootstrap support for P54045 as seed ortholog is 100%.

Group of orthologs #134. Best score 168 bits
Score difference with first non-orthologous sequence - A.thaliana:168 M.jannaschii:168

Q9LZ03              	100.00%		Q57815              	100.00%
Bootstrap support for Q9LZ03 as seed ortholog is 100%.
Bootstrap support for Q57815 as seed ortholog is 100%.

Group of orthologs #135. Best score 166 bits
Score difference with first non-orthologous sequence - A.thaliana:76 M.jannaschii:166

Q9LFU5              	100.00%		Q58356              	100.00%
Q9SRU7              	100.00%		
Bootstrap support for Q9LFU5 as seed ortholog is 94%.
Bootstrap support for Q9SRU7 as seed ortholog is 94%.
Bootstrap support for Q58356 as seed ortholog is 100%.

Group of orthologs #136. Best score 165 bits
Score difference with first non-orthologous sequence - A.thaliana:165 M.jannaschii:165

O23346              	100.00%		Q58109              	100.00%
Bootstrap support for O23346 as seed ortholog is 100%.
Bootstrap support for Q58109 as seed ortholog is 100%.

Group of orthologs #137. Best score 164 bits
Score difference with first non-orthologous sequence - A.thaliana:114 M.jannaschii:164

O23443              	100.00%		Q59050              	100.00%
Q9LUR3              	81.23%		
Bootstrap support for O23443 as seed ortholog is 99%.
Bootstrap support for Q59050 as seed ortholog is 100%.

Group of orthologs #138. Best score 162 bits
Score difference with first non-orthologous sequence - A.thaliana:162 M.jannaschii:162

Q39242              	100.00%		Q58931              	100.00%
Q39243              	100.00%		
O22229              	29.53%		
Bootstrap support for Q39242 as seed ortholog is 100%.
Bootstrap support for Q39243 as seed ortholog is 100%.
Bootstrap support for Q58931 as seed ortholog is 100%.

Group of orthologs #139. Best score 160 bits
Score difference with first non-orthologous sequence - A.thaliana:35 M.jannaschii:160

Q941D6              	100.00%		Q57955              	100.00%
Bootstrap support for Q941D6 as seed ortholog is 79%.
Bootstrap support for Q57955 as seed ortholog is 100%.

Group of orthologs #140. Best score 158 bits
Score difference with first non-orthologous sequence - A.thaliana:78 M.jannaschii:158

P42795              	100.00%		P54040              	100.00%
P42794              	99.51%		
Bootstrap support for P42795 as seed ortholog is 99%.
Bootstrap support for P54040 as seed ortholog is 100%.

Group of orthologs #141. Best score 157 bits
Score difference with first non-orthologous sequence - A.thaliana:157 M.jannaschii:157

P42804              	100.00%		Q60172              	100.00%
P49294              	75.31%		
Q9SJX1              	54.08%		
Bootstrap support for P42804 as seed ortholog is 100%.
Bootstrap support for Q60172 as seed ortholog is 100%.

Group of orthologs #142. Best score 157 bits
Score difference with first non-orthologous sequence - A.thaliana:157 M.jannaschii:157

P49691              	100.00%		P54015              	100.00%
Q9SF40              	100.00%		
Bootstrap support for P49691 as seed ortholog is 100%.
Bootstrap support for Q9SF40 as seed ortholog is 100%.
Bootstrap support for P54015 as seed ortholog is 100%.

Group of orthologs #143. Best score 156 bits
Score difference with first non-orthologous sequence - A.thaliana:156 M.jannaschii:156

O64862              	100.00%		Q58558              	100.00%
F4I2A4              	78.56%		
Bootstrap support for O64862 as seed ortholog is 100%.
Bootstrap support for Q58558 as seed ortholog is 100%.

Group of orthologs #144. Best score 156 bits
Score difference with first non-orthologous sequence - A.thaliana:156 M.jannaschii:156

F4J3A9              	100.00%		Q58473              	100.00%
Bootstrap support for F4J3A9 as seed ortholog is 100%.
Bootstrap support for Q58473 as seed ortholog is 100%.

Group of orthologs #145. Best score 155 bits
Score difference with first non-orthologous sequence - A.thaliana:86 M.jannaschii:155

Q9LRR0              	100.00%		Q58270              	100.00%
Q9LUD9              	92.39%		
Q9LUE1              	85.34%		
Q9LIA0              	81.45%		
Q9LHR4              	80.52%		
P34802              	54.73%		
Q9SLG2              	48.24%		
Q9ZU77              	48.24%		
O04046              	46.01%		
Q9LJY2              	41.74%		
O22043              	38.59%		
Q39108              	11.87%		
Bootstrap support for Q9LRR0 as seed ortholog is 99%.
Bootstrap support for Q58270 as seed ortholog is 100%.

Group of orthologs #146. Best score 155 bits
Score difference with first non-orthologous sequence - A.thaliana:155 M.jannaschii:155

P59223              	100.00%		P54012              	100.00%
P59224              	97.97%		
Bootstrap support for P59223 as seed ortholog is 100%.
Bootstrap support for P54012 as seed ortholog is 100%.

Group of orthologs #147. Best score 154 bits
Score difference with first non-orthologous sequence - A.thaliana:154 M.jannaschii:154

Q9SSE7              	100.00%		Q58054              	100.00%
Q9SA96              	41.37%		
Q9SGD6              	40.87%		
Q9ZUY3              	39.87%		
Q9FNJ8              	35.68%		
O22241              	34.67%		
Bootstrap support for Q9SSE7 as seed ortholog is 100%.
Bootstrap support for Q58054 as seed ortholog is 100%.

Group of orthologs #148. Best score 154 bits
Score difference with first non-orthologous sequence - A.thaliana:154 M.jannaschii:89

Q9FE37              	100.00%		Q57690              	100.00%
Q9FJM5              	100.00%		
F4IAW5              	94.31%		
Bootstrap support for Q9FE37 as seed ortholog is 100%.
Bootstrap support for Q9FJM5 as seed ortholog is 100%.
Bootstrap support for Q57690 as seed ortholog is 99%.

Group of orthologs #149. Best score 153 bits
Score difference with first non-orthologous sequence - A.thaliana:153 M.jannaschii:153

F4HVA0              	100.00%		Q59047              	100.00%
                    	       		Q59043              	34.31%
Bootstrap support for F4HVA0 as seed ortholog is 100%.
Bootstrap support for Q59047 as seed ortholog is 100%.

Group of orthologs #150. Best score 153 bits
Score difference with first non-orthologous sequence - A.thaliana:153 M.jannaschii:153

Q42539              	100.00%		Q57636              	100.00%
Q64J17              	56.58%		
Bootstrap support for Q42539 as seed ortholog is 100%.
Bootstrap support for Q57636 as seed ortholog is 100%.

Group of orthologs #151. Best score 152 bits
Score difference with first non-orthologous sequence - A.thaliana:152 M.jannaschii:152

P56753              	100.00%		Q57935              	100.00%
P93306              	20.55%		Q58433              	10.47%
Bootstrap support for P56753 as seed ortholog is 100%.
Bootstrap support for Q57935 as seed ortholog is 100%.

Group of orthologs #152. Best score 152 bits
Score difference with first non-orthologous sequence - A.thaliana:152 M.jannaschii:152

Q8L7R2              	100.00%		Q58504              	100.00%
Bootstrap support for Q8L7R2 as seed ortholog is 100%.
Bootstrap support for Q58504 as seed ortholog is 100%.

Group of orthologs #153. Best score 151 bits
Score difference with first non-orthologous sequence - A.thaliana:4 M.jannaschii:104

Q9SN58              	100.00%		Q57664              	100.00%
Q9T0A7              	84.93%		
Q9C7W7              	76.24%		
Q42605              	58.87%		
Q8LDN8              	58.16%		
O64749              	21.45%		
Q9SA77              	21.45%		
Q9FI17              	21.28%		
Q9SUN3              	20.21%		
Bootstrap support for Q9SN58 as seed ortholog is 52%.
Alternative seed ortholog is Q8VZC0 (4 bits away from this cluster)
Bootstrap support for Q57664 as seed ortholog is 99%.

Group of orthologs #154. Best score 147 bits
Score difference with first non-orthologous sequence - A.thaliana:43 M.jannaschii:147

O64903              	100.00%		Q58661              	100.00%
P39207              	13.66%		
O49203              	12.42%		
Q8LAH8              	11.18%		
Bootstrap support for O64903 as seed ortholog is 99%.
Bootstrap support for Q58661 as seed ortholog is 100%.

Group of orthologs #155. Best score 147 bits
Score difference with first non-orthologous sequence - A.thaliana:147 M.jannaschii:147

P49204              	100.00%		P54039              	100.00%
Q93VH9              	100.00%		
Q8VYK6              	99.22%		
Bootstrap support for P49204 as seed ortholog is 100%.
Bootstrap support for Q93VH9 as seed ortholog is 100%.
Bootstrap support for P54039 as seed ortholog is 100%.

Group of orthologs #156. Best score 146 bits
Score difference with first non-orthologous sequence - A.thaliana:146 M.jannaschii:146

Q9SS44              	100.00%		Q58192              	100.00%
P48512              	83.89%		
Q9LIA6              	21.76%		
Q9M2L0              	6.07%		
Bootstrap support for Q9SS44 as seed ortholog is 100%.
Bootstrap support for Q58192 as seed ortholog is 100%.

Group of orthologs #157. Best score 146 bits
Score difference with first non-orthologous sequence - A.thaliana:146 M.jannaschii:146

Q08682              	100.00%		P54109              	100.00%
Q8H173              	100.00%		
Bootstrap support for Q08682 as seed ortholog is 100%.
Bootstrap support for Q8H173 as seed ortholog is 100%.
Bootstrap support for P54109 as seed ortholog is 100%.

Group of orthologs #158. Best score 146 bits
Score difference with first non-orthologous sequence - A.thaliana:146 M.jannaschii:146

Q39055              	100.00%		Q58234              	100.00%
Bootstrap support for Q39055 as seed ortholog is 100%.
Bootstrap support for Q58234 as seed ortholog is 100%.

Group of orthologs #159. Best score 145 bits
Score difference with first non-orthologous sequence - A.thaliana:72 M.jannaschii:145

Q9S726              	100.00%		Q58998              	100.00%
Q9ZU38              	35.13%		
Q9C998              	32.05%		
Bootstrap support for Q9S726 as seed ortholog is 98%.
Bootstrap support for Q58998 as seed ortholog is 100%.

Group of orthologs #160. Best score 144 bits
Score difference with first non-orthologous sequence - A.thaliana:39 M.jannaschii:144

Q9FHF1              	100.00%		Q58639              	100.00%
Q9C7F2              	100.00%		Q59056              	100.00%
Q9C7F8              	89.66%		
Q9M0M2              	72.64%		
Q9FWX7              	60.56%		
Q9M1Q9              	59.50%		
O80725              	59.32%		
Q9FWX8              	58.74%		
Q9SYI2              	58.52%		
Q9SYI3              	57.99%		
Q9LJX0              	48.11%		
Q8LPK2              	47.32%		
Q9ZR72              	46.57%		
Q9SGY1              	45.69%		
Q9LHD1              	38.47%		
Q9LSJ5              	38.29%		
Q9LSJ6              	37.72%		
Q9LSJ2              	36.97%		
Q9LSJ8              	36.62%		
Q8LPT1              	36.49%		
Q9M3B9              	36.36%		
Q9LHK4              	31.82%		
Bootstrap support for Q9FHF1 as seed ortholog is 73%.
Alternative seed ortholog is Q9FIB4 (39 bits away from this cluster)
Bootstrap support for Q9C7F2 as seed ortholog is 75%.
Bootstrap support for Q58639 as seed ortholog is 100%.
Bootstrap support for Q59056 as seed ortholog is 100%.

Group of orthologs #161. Best score 144 bits
Score difference with first non-orthologous sequence - A.thaliana:65 M.jannaschii:144

P42036              	100.00%		P54021              	100.00%
Q9CAX6              	100.00%		
Q9SIH0              	100.00%		
Bootstrap support for P42036 as seed ortholog is 99%.
Bootstrap support for Q9CAX6 as seed ortholog is 99%.
Bootstrap support for Q9SIH0 as seed ortholog is 99%.
Bootstrap support for P54021 as seed ortholog is 100%.

Group of orthologs #162. Best score 144 bits
Score difference with first non-orthologous sequence - A.thaliana:42 M.jannaschii:144

Q9C6B3              	100.00%		Q57752              	100.00%
Q9FWR5              	69.66%		
Q94AU7              	54.13%		
Bootstrap support for Q9C6B3 as seed ortholog is 96%.
Bootstrap support for Q57752 as seed ortholog is 100%.

Group of orthologs #163. Best score 144 bits
Score difference with first non-orthologous sequence - A.thaliana:144 M.jannaschii:144

Q9SIC4              	100.00%		Q58030              	100.00%
B9DFZ0              	57.53%		
Bootstrap support for Q9SIC4 as seed ortholog is 100%.
Bootstrap support for Q58030 as seed ortholog is 100%.

Group of orthologs #164. Best score 144 bits
Score difference with first non-orthologous sequence - A.thaliana:144 M.jannaschii:144

P54967              	100.00%		Q58692              	100.00%
Bootstrap support for P54967 as seed ortholog is 100%.
Bootstrap support for Q58692 as seed ortholog is 100%.

Group of orthologs #165. Best score 144 bits
Score difference with first non-orthologous sequence - A.thaliana:144 M.jannaschii:144

Q8LG88              	100.00%		Q58086              	100.00%
Bootstrap support for Q8LG88 as seed ortholog is 100%.
Bootstrap support for Q58086 as seed ortholog is 100%.

Group of orthologs #166. Best score 143 bits
Score difference with first non-orthologous sequence - A.thaliana:143 M.jannaschii:143

Q9MAQ0              	100.00%		Q59001              	100.00%
Q9MAC8              	19.11%		
Q9FNF2              	17.54%		
Bootstrap support for Q9MAQ0 as seed ortholog is 100%.
Bootstrap support for Q59001 as seed ortholog is 100%.

Group of orthologs #167. Best score 143 bits
Score difference with first non-orthologous sequence - A.thaliana:50 M.jannaschii:24

Q9C9W0              	100.00%		Q58418              	100.00%
Bootstrap support for Q9C9W0 as seed ortholog is 92%.
Bootstrap support for Q58418 as seed ortholog is 75%.

Group of orthologs #168. Best score 142 bits
Score difference with first non-orthologous sequence - A.thaliana:142 M.jannaschii:142

Q8H103              	100.00%		Q59000              	100.00%
Bootstrap support for Q8H103 as seed ortholog is 100%.
Bootstrap support for Q59000 as seed ortholog is 100%.

Group of orthologs #169. Best score 142 bits
Score difference with first non-orthologous sequence - A.thaliana:56 M.jannaschii:78

Q9CAF5              	100.00%		Q60350              	100.00%
Bootstrap support for Q9CAF5 as seed ortholog is 95%.
Bootstrap support for Q60350 as seed ortholog is 99%.

Group of orthologs #170. Best score 141 bits
Score difference with first non-orthologous sequence - A.thaliana:141 M.jannaschii:141

Q9FY66              	100.00%		P54018              	100.00%
Q9FY64              	77.91%		
Q08112              	76.69%		
Q9FY65              	74.23%		
Q9FIX6              	68.10%		
Q9FML6              	19.63%		
Bootstrap support for Q9FY66 as seed ortholog is 100%.
Bootstrap support for P54018 as seed ortholog is 100%.

Group of orthologs #171. Best score 141 bits
Score difference with first non-orthologous sequence - A.thaliana:37 M.jannaschii:141

Q9M8Z5              	100.00%		Q58859              	100.00%
Q9C923              	8.31%		
Bootstrap support for Q9M8Z5 as seed ortholog is 79%.
Bootstrap support for Q58859 as seed ortholog is 100%.

Group of orthologs #172. Best score 141 bits
Score difference with first non-orthologous sequence - A.thaliana:80 M.jannaschii:141

F4J4T3              	100.00%		Q58810              	100.00%
Bootstrap support for F4J4T3 as seed ortholog is 96%.
Bootstrap support for Q58810 as seed ortholog is 100%.

Group of orthologs #173. Best score 139 bits
Score difference with first non-orthologous sequence - A.thaliana:139 M.jannaschii:139

Q9FVC8              	100.00%		Q57695              	100.00%
Q9LZX6              	86.84%		
Bootstrap support for Q9FVC8 as seed ortholog is 100%.
Bootstrap support for Q57695 as seed ortholog is 100%.

Group of orthologs #174. Best score 139 bits
Score difference with first non-orthologous sequence - A.thaliana:68 M.jannaschii:139

P49690              	100.00%		P54037              	100.00%
Bootstrap support for P49690 as seed ortholog is 99%.
Bootstrap support for P54037 as seed ortholog is 100%.

Group of orthologs #175. Best score 139 bits
Score difference with first non-orthologous sequence - A.thaliana:49 M.jannaschii:139

Q9LVI9              	100.00%		Q58070              	100.00%
Bootstrap support for Q9LVI9 as seed ortholog is 88%.
Bootstrap support for Q58070 as seed ortholog is 100%.

Group of orthologs #176. Best score 138 bits
Score difference with first non-orthologous sequence - A.thaliana:138 M.jannaschii:138

F4IFC5              	100.00%		Q58597              	100.00%
O04630              	23.11%		
Q8GZ45              	8.74%		
Bootstrap support for F4IFC5 as seed ortholog is 100%.
Bootstrap support for Q58597 as seed ortholog is 100%.

Group of orthologs #177. Best score 138 bits
Score difference with first non-orthologous sequence - A.thaliana:47 M.jannaschii:138

O23569              	100.00%		Q60176              	100.00%
Bootstrap support for O23569 as seed ortholog is 87%.
Bootstrap support for Q60176 as seed ortholog is 100%.

Group of orthologs #178. Best score 137 bits
Score difference with first non-orthologous sequence - A.thaliana:137 M.jannaschii:137

Q9ZT87              	100.00%		Q57638              	100.00%
Q9M2H7              	79.60%		
Bootstrap support for Q9ZT87 as seed ortholog is 100%.
Bootstrap support for Q57638 as seed ortholog is 100%.

Group of orthologs #179. Best score 135 bits
Score difference with first non-orthologous sequence - A.thaliana:48 M.jannaschii:135

Q8L725              	100.00%		Q57891              	100.00%
Bootstrap support for Q8L725 as seed ortholog is 98%.
Bootstrap support for Q57891 as seed ortholog is 100%.

Group of orthologs #180. Best score 134 bits
Score difference with first non-orthologous sequence - A.thaliana:134 M.jannaschii:134

Q93W22              	100.00%		Q57963              	100.00%
Q08770              	93.15%		
Q93VT9              	92.21%		
Bootstrap support for Q93W22 as seed ortholog is 100%.
Bootstrap support for Q57963 as seed ortholog is 100%.

Group of orthologs #181. Best score 134 bits
Score difference with first non-orthologous sequence - A.thaliana:134 M.jannaschii:134

F4KHB6              	100.00%		Q58554              	100.00%
Q9FL05              	85.82%		
Bootstrap support for F4KHB6 as seed ortholog is 100%.
Bootstrap support for Q58554 as seed ortholog is 100%.

Group of orthologs #182. Best score 134 bits
Score difference with first non-orthologous sequence - A.thaliana:53 M.jannaschii:134

O22268              	100.00%		Q58435              	100.00%
Q9FK02              	28.07%		
Bootstrap support for O22268 as seed ortholog is 96%.
Bootstrap support for Q58435 as seed ortholog is 100%.

Group of orthologs #183. Best score 134 bits
Score difference with first non-orthologous sequence - A.thaliana:58 M.jannaschii:134

P34788              	100.00%		P54019              	100.00%
Bootstrap support for P34788 as seed ortholog is 99%.
Bootstrap support for P54019 as seed ortholog is 100%.

Group of orthologs #184. Best score 134 bits
Score difference with first non-orthologous sequence - A.thaliana:134 M.jannaschii:134

Q8L7Q9              	100.00%		Q58803              	100.00%
Bootstrap support for Q8L7Q9 as seed ortholog is 100%.
Bootstrap support for Q58803 as seed ortholog is 100%.

Group of orthologs #185. Best score 134 bits
Score difference with first non-orthologous sequence - A.thaliana:134 M.jannaschii:134

Q9SJ42              	100.00%		Q58033              	100.00%
Bootstrap support for Q9SJ42 as seed ortholog is 100%.
Bootstrap support for Q58033 as seed ortholog is 100%.

Group of orthologs #186. Best score 133 bits
Score difference with first non-orthologous sequence - A.thaliana:74 M.jannaschii:133

Q42583              	100.00%		Q58761              	100.00%
Q42581              	86.55%		
O64888              	67.70%		
Bootstrap support for Q42583 as seed ortholog is 99%.
Bootstrap support for Q58761 as seed ortholog is 100%.

Group of orthologs #187. Best score 131 bits
Score difference with first non-orthologous sequence - A.thaliana:1 M.jannaschii:39

Q8H1R4              	100.00%		Q58488              	100.00%
                    	       		Q58967              	12.68%
Bootstrap support for Q8H1R4 as seed ortholog is 47%.
Alternative seed ortholog is Q9AT00 (1 bits away from this cluster)
Bootstrap support for Q58488 as seed ortholog is 86%.

Group of orthologs #188. Best score 131 bits
Score difference with first non-orthologous sequence - A.thaliana:131 M.jannaschii:131

Q9ZUT3              	100.00%		Q58348              	100.00%
Bootstrap support for Q9ZUT3 as seed ortholog is 100%.
Bootstrap support for Q58348 as seed ortholog is 100%.

Group of orthologs #189. Best score 130 bits
Score difference with first non-orthologous sequence - A.thaliana:130 M.jannaschii:130

Q8W4S4              	100.00%		Q57675              	100.00%
Q9SJT7              	89.93%		
Q8RWZ7              	60.93%		
Bootstrap support for Q8W4S4 as seed ortholog is 100%.
Bootstrap support for Q57675 as seed ortholog is 100%.

Group of orthologs #190. Best score 129 bits
Score difference with first non-orthologous sequence - A.thaliana:75 M.jannaschii:129

P57691              	100.00%		P54049              	100.00%
Q42112              	92.67%		
O04204              	77.39%		
Bootstrap support for P57691 as seed ortholog is 99%.
Bootstrap support for P54049 as seed ortholog is 100%.

Group of orthologs #191. Best score 129 bits
Score difference with first non-orthologous sequence - A.thaliana:129 M.jannaschii:129

Q9LUB2              	100.00%		Q58328              	100.00%
P49572              	56.35%		
Bootstrap support for Q9LUB2 as seed ortholog is 100%.
Bootstrap support for Q58328 as seed ortholog is 100%.

Group of orthologs #192. Best score 128 bits
Score difference with first non-orthologous sequence - A.thaliana:62 M.jannaschii:55

Q9M2S0              	100.00%		Q58501              	100.00%
O22287              	83.14%		
Q8H1Q7              	58.10%		
F4IFA4              	11.69%		
Q9C9P3              	10.85%		
Bootstrap support for Q9M2S0 as seed ortholog is 96%.
Bootstrap support for Q58501 as seed ortholog is 92%.

Group of orthologs #193. Best score 128 bits
Score difference with first non-orthologous sequence - A.thaliana:128 M.jannaschii:128

Q9FM01              	100.00%		Q57871              	100.00%
Q9LIA8              	94.04%		
Q9LF33              	90.58%		
Q9FZE1              	82.00%		
Bootstrap support for Q9FM01 as seed ortholog is 100%.
Bootstrap support for Q57871 as seed ortholog is 100%.

Group of orthologs #194. Best score 128 bits
Score difference with first non-orthologous sequence - A.thaliana:14 M.jannaschii:128

Q8GUN8              	100.00%		Q58771              	100.00%
Bootstrap support for Q8GUN8 as seed ortholog is 65%.
Alternative seed ortholog is Q9SXH3 (14 bits away from this cluster)
Bootstrap support for Q58771 as seed ortholog is 100%.

Group of orthologs #195. Best score 127 bits
Score difference with first non-orthologous sequence - A.thaliana:77 M.jannaschii:127

P49201              	100.00%		P54062              	100.00%
Q9SF35              	91.30%		
Bootstrap support for P49201 as seed ortholog is 99%.
Bootstrap support for P54062 as seed ortholog is 100%.

Group of orthologs #196. Best score 126 bits
Score difference with first non-orthologous sequence - A.thaliana:126 M.jannaschii:126

Q84TF1              	100.00%		Q57732              	100.00%
Bootstrap support for Q84TF1 as seed ortholog is 100%.
Bootstrap support for Q57732 as seed ortholog is 100%.

Group of orthologs #197. Best score 126 bits
Score difference with first non-orthologous sequence - A.thaliana:126 M.jannaschii:126

Q84TI2              	100.00%		Q58881              	100.00%
Bootstrap support for Q84TI2 as seed ortholog is 100%.
Bootstrap support for Q58881 as seed ortholog is 100%.

Group of orthologs #198. Best score 126 bits
Score difference with first non-orthologous sequence - A.thaliana:126 M.jannaschii:126

Q9ZU32              	100.00%		Q57916              	100.00%
Bootstrap support for Q9ZU32 as seed ortholog is 100%.
Bootstrap support for Q57916 as seed ortholog is 100%.

Group of orthologs #199. Best score 125 bits
Score difference with first non-orthologous sequence - A.thaliana:125 M.jannaschii:125

P28147              	100.00%		Q57930              	100.00%
P28148              	100.00%		
Bootstrap support for P28147 as seed ortholog is 100%.
Bootstrap support for P28148 as seed ortholog is 100%.
Bootstrap support for Q57930 as seed ortholog is 100%.

Group of orthologs #200. Best score 125 bits
Score difference with first non-orthologous sequence - A.thaliana:125 M.jannaschii:125

Q9M8D3              	100.00%		Q58660              	100.00%
Bootstrap support for Q9M8D3 as seed ortholog is 100%.
Bootstrap support for Q58660 as seed ortholog is 100%.

Group of orthologs #201. Best score 124 bits
Score difference with first non-orthologous sequence - A.thaliana:124 M.jannaschii:124

P42798              	100.00%		P54041              	100.00%
Q9LX88              	97.83%		
O80646              	85.51%		
Q9M0E0              	15.22%		
O82205              	10.87%		
Bootstrap support for P42798 as seed ortholog is 100%.
Bootstrap support for P54041 as seed ortholog is 100%.

Group of orthologs #202. Best score 124 bits
Score difference with first non-orthologous sequence - A.thaliana:9 M.jannaschii:124

Q9SL02              	100.00%		Q58718              	100.00%
Bootstrap support for Q9SL02 as seed ortholog is 45%.
Alternative seed ortholog is Q9C5Y4 (9 bits away from this cluster)
Bootstrap support for Q58718 as seed ortholog is 100%.

Group of orthologs #203. Best score 123 bits
Score difference with first non-orthologous sequence - A.thaliana:69 M.jannaschii:123

Q9M339              	100.00%		P54034              	100.00%
Q9SIP7              	90.06%		
Q9FJA6              	87.29%		
Bootstrap support for Q9M339 as seed ortholog is 99%.
Bootstrap support for P54034 as seed ortholog is 100%.

Group of orthologs #204. Best score 123 bits
Score difference with first non-orthologous sequence - A.thaliana:81 M.jannaschii:123

Q9FLF0              	100.00%		P54020              	100.00%
Q9LXG1              	84.56%		
Bootstrap support for Q9FLF0 as seed ortholog is 100%.
Bootstrap support for P54020 as seed ortholog is 100%.

Group of orthologs #205. Best score 121 bits
Score difference with first non-orthologous sequence - A.thaliana:60 M.jannaschii:121

F4ITP5              	100.00%		Q58760              	100.00%
Q8GXY6              	51.25%		
Bootstrap support for F4ITP5 as seed ortholog is 95%.
Bootstrap support for Q58760 as seed ortholog is 100%.

Group of orthologs #206. Best score 119 bits
Score difference with first non-orthologous sequence - A.thaliana:119 M.jannaschii:119

P46637              	100.00%		Q57757              	100.00%
Q9ZPF5              	83.81%		
Bootstrap support for P46637 as seed ortholog is 100%.
Bootstrap support for Q57757 as seed ortholog is 100%.

Group of orthologs #207. Best score 119 bits
Score difference with first non-orthologous sequence - A.thaliana:119 M.jannaschii:119

F4KFG2              	100.00%		Q58118              	100.00%
Bootstrap support for F4KFG2 as seed ortholog is 100%.
Bootstrap support for Q58118 as seed ortholog is 100%.

Group of orthologs #208. Best score 119 bits
Score difference with first non-orthologous sequence - A.thaliana:119 M.jannaschii:119

Q38814              	100.00%		Q58018              	100.00%
Bootstrap support for Q38814 as seed ortholog is 100%.
Bootstrap support for Q58018 as seed ortholog is 100%.

Group of orthologs #209. Best score 118 bits
Score difference with first non-orthologous sequence - A.thaliana:9 M.jannaschii:118

Q9LDV4              	100.00%		Q58874              	100.00%
F4I7I0              	84.77%		
Q9LR30              	37.20%		
Q9S7E9              	37.20%		
Bootstrap support for Q9LDV4 as seed ortholog is 56%.
Alternative seed ortholog is Q67Y55 (9 bits away from this cluster)
Bootstrap support for Q58874 as seed ortholog is 100%.

Group of orthologs #210. Best score 118 bits
Score difference with first non-orthologous sequence - A.thaliana:118 M.jannaschii:118

P49227              	100.00%		P54044              	100.00%
Q8LBI1              	97.13%		
Bootstrap support for P49227 as seed ortholog is 100%.
Bootstrap support for P54044 as seed ortholog is 100%.

Group of orthologs #211. Best score 118 bits
Score difference with first non-orthologous sequence - A.thaliana:49 M.jannaschii:118

Q9C5R8              	100.00%		Q58146              	100.00%
Q96291              	78.85%		
Bootstrap support for Q9C5R8 as seed ortholog is 97%.
Bootstrap support for Q58146 as seed ortholog is 100%.

Group of orthologs #212. Best score 117 bits
Score difference with first non-orthologous sequence - A.thaliana:117 M.jannaschii:117

Q9LUQ6              	100.00%		P54043              	100.00%
P49693              	78.67%		
Q9SRX2              	77.67%		
Bootstrap support for Q9LUQ6 as seed ortholog is 100%.
Bootstrap support for P54043 as seed ortholog is 100%.

Group of orthologs #213. Best score 115 bits
Score difference with first non-orthologous sequence - A.thaliana:34 M.jannaschii:115

P0CC33              	100.00%		Q58705              	100.00%
P0CC32              	100.00%		
O05000              	15.87%		
Bootstrap support for P0CC33 as seed ortholog is 61%.
Alternative seed ortholog is P56752 (34 bits away from this cluster)
Bootstrap support for P0CC32 as seed ortholog is 61%.
Alternative seed ortholog is P56752 (34 bits away from this cluster)
Bootstrap support for Q58705 as seed ortholog is 100%.

Group of orthologs #214. Best score 115 bits
Score difference with first non-orthologous sequence - A.thaliana:115 M.jannaschii:115

Q9SIZ2              	100.00%		Q57581              	100.00%
Q9FE78              	82.56%		
Bootstrap support for Q9SIZ2 as seed ortholog is 100%.
Bootstrap support for Q57581 as seed ortholog is 100%.

Group of orthologs #215. Best score 114 bits
Score difference with first non-orthologous sequence - A.thaliana:114 M.jannaschii:114

P56756              	100.00%		Q57936              	100.00%
Q42577              	13.33%		Q58758              	24.61%
Bootstrap support for P56756 as seed ortholog is 100%.
Bootstrap support for Q57936 as seed ortholog is 100%.

Group of orthologs #216. Best score 113 bits
Score difference with first non-orthologous sequence - A.thaliana:36 M.jannaschii:57

Q9MBA2              	100.00%		Q57967              	100.00%
                    	       		Q57633              	20.89%
Bootstrap support for Q9MBA2 as seed ortholog is 83%.
Bootstrap support for Q57967 as seed ortholog is 91%.

Group of orthologs #217. Best score 113 bits
Score difference with first non-orthologous sequence - A.thaliana:113 M.jannaschii:113

Q9ZST4              	100.00%		Q60381              	100.00%
                    	       		Q58740              	96.23%
Bootstrap support for Q9ZST4 as seed ortholog is 100%.
Bootstrap support for Q60381 as seed ortholog is 100%.

Group of orthologs #218. Best score 113 bits
Score difference with first non-orthologous sequence - A.thaliana:113 M.jannaschii:113

O81915              	100.00%		Q57898              	100.00%
Bootstrap support for O81915 as seed ortholog is 100%.
Bootstrap support for Q57898 as seed ortholog is 100%.

Group of orthologs #219. Best score 113 bits
Score difference with first non-orthologous sequence - A.thaliana:113 M.jannaschii:113

Q8VYI4              	100.00%		Q57658              	100.00%
Bootstrap support for Q8VYI4 as seed ortholog is 100%.
Bootstrap support for Q57658 as seed ortholog is 100%.

Group of orthologs #220. Best score 113 bits
Score difference with first non-orthologous sequence - A.thaliana:23 M.jannaschii:113

Q94AP0              	100.00%		Q58885              	100.00%
Bootstrap support for Q94AP0 as seed ortholog is 65%.
Alternative seed ortholog is Q9FMP3 (23 bits away from this cluster)
Bootstrap support for Q58885 as seed ortholog is 100%.

Group of orthologs #221. Best score 112 bits
Score difference with first non-orthologous sequence - A.thaliana:49 M.jannaschii:112

Q8W4K3              	100.00%		Q58026              	100.00%
Q9ASS7              	60.07%		
Q8GYB4              	58.40%		
Q9C5D6              	19.12%		
Q9LZ20              	18.66%		
Q9SQZ0              	18.28%		
Q84MA5              	13.71%		
O64759              	11.38%		
Q9SHH0              	11.29%		
Bootstrap support for Q8W4K3 as seed ortholog is 90%.
Bootstrap support for Q58026 as seed ortholog is 100%.

Group of orthologs #222. Best score 111 bits
Score difference with first non-orthologous sequence - A.thaliana:111 M.jannaschii:111

Q9M7Q7              	100.00%		Q57697              	100.00%
Q9ZW35              	96.79%		
Bootstrap support for Q9M7Q7 as seed ortholog is 100%.
Bootstrap support for Q57697 as seed ortholog is 100%.

Group of orthologs #223. Best score 111 bits
Score difference with first non-orthologous sequence - A.thaliana:51 M.jannaschii:111

Q9SZX9              	100.00%		P54042              	100.00%
P49209              	85.56%		
Bootstrap support for Q9SZX9 as seed ortholog is 97%.
Bootstrap support for P54042 as seed ortholog is 100%.

Group of orthologs #224. Best score 111 bits
Score difference with first non-orthologous sequence - A.thaliana:20 M.jannaschii:111

Q9C509              	100.00%		Q60358              	100.00%
Bootstrap support for Q9C509 as seed ortholog is 66%.
Alternative seed ortholog is Q9MA74 (20 bits away from this cluster)
Bootstrap support for Q60358 as seed ortholog is 100%.

Group of orthologs #225. Best score 109 bits
Score difference with first non-orthologous sequence - A.thaliana:8 M.jannaschii:109

O23717              	100.00%		Q58634              	100.00%
Q9LIP2              	100.00%		
Bootstrap support for O23717 as seed ortholog is 62%.
Alternative seed ortholog is Q7DLS1 (8 bits away from this cluster)
Bootstrap support for Q9LIP2 as seed ortholog is 63%.
Alternative seed ortholog is Q7DLS1 (8 bits away from this cluster)
Bootstrap support for Q58634 as seed ortholog is 100%.

Group of orthologs #226. Best score 109 bits
Score difference with first non-orthologous sequence - A.thaliana:109 M.jannaschii:109

Q9C713              	100.00%		Q57689              	100.00%
O23247              	88.82%		
Bootstrap support for Q9C713 as seed ortholog is 100%.
Bootstrap support for Q57689 as seed ortholog is 100%.

Group of orthologs #227. Best score 108 bits
Score difference with first non-orthologous sequence - A.thaliana:39 M.jannaschii:108

P59231              	100.00%		P54050              	100.00%
Q8VZB9              	89.72%		
P59230              	87.23%		
Bootstrap support for P59231 as seed ortholog is 92%.
Bootstrap support for P54050 as seed ortholog is 100%.

Group of orthologs #228. Best score 108 bits
Score difference with first non-orthologous sequence - A.thaliana:108 M.jannaschii:108

Q9SGA6              	100.00%		P54057              	100.00%
Q9LF30              	94.59%		
Bootstrap support for Q9SGA6 as seed ortholog is 100%.
Bootstrap support for P54057 as seed ortholog is 100%.

Group of orthologs #229. Best score 107 bits
Score difference with first non-orthologous sequence - A.thaliana:107 M.jannaschii:107

Q8LAD0              	100.00%		Q59055              	100.00%
Bootstrap support for Q8LAD0 as seed ortholog is 100%.
Bootstrap support for Q59055 as seed ortholog is 100%.

Group of orthologs #230. Best score 107 bits
Score difference with first non-orthologous sequence - A.thaliana:15 M.jannaschii:107

Q9LKI5              	100.00%		Q58900              	100.00%
Bootstrap support for Q9LKI5 as seed ortholog is 61%.
Alternative seed ortholog is Q9SZB4 (15 bits away from this cluster)
Bootstrap support for Q58900 as seed ortholog is 100%.

Group of orthologs #231. Best score 106 bits
Score difference with first non-orthologous sequence - A.thaliana:52 M.jannaschii:106

Q9SYD6              	100.00%		Q58119              	100.00%
Q9SFB0              	50.67%		
Q84K71              	32.29%		
Q9SVE7              	26.91%		
Bootstrap support for Q9SYD6 as seed ortholog is 56%.
Alternative seed ortholog is Q9FHB6 (52 bits away from this cluster)
Bootstrap support for Q58119 as seed ortholog is 100%.

Group of orthologs #232. Best score 106 bits
Score difference with first non-orthologous sequence - A.thaliana:106 M.jannaschii:106

Q9ZW85              	100.00%		Q58673              	100.00%
Q9LYT7              	61.32%		Q58667              	23.50%
Q9ZW84              	51.65%		
Bootstrap support for Q9ZW85 as seed ortholog is 100%.
Bootstrap support for Q58673 as seed ortholog is 100%.

Group of orthologs #233. Best score 103 bits
Score difference with first non-orthologous sequence - A.thaliana:103 M.jannaschii:103

O22290              	100.00%		Q60357              	100.00%
Q9M060              	100.00%		
Bootstrap support for O22290 as seed ortholog is 100%.
Bootstrap support for Q9M060 as seed ortholog is 100%.
Bootstrap support for Q60357 as seed ortholog is 100%.

Group of orthologs #234. Best score 103 bits
Score difference with first non-orthologous sequence - A.thaliana:40 M.jannaschii:103

Q8GUN7              	100.00%		Q58339              	100.00%
Q8RY94              	86.40%		
Bootstrap support for Q8GUN7 as seed ortholog is 87%.
Bootstrap support for Q58339 as seed ortholog is 100%.

Group of orthologs #235. Best score 103 bits
Score difference with first non-orthologous sequence - A.thaliana:103 M.jannaschii:103

Q8GSJ1              	100.00%		Q58601              	100.00%
Q9S762              	77.16%		
Bootstrap support for Q8GSJ1 as seed ortholog is 100%.
Bootstrap support for Q58601 as seed ortholog is 100%.

Group of orthologs #236. Best score 102 bits
Score difference with first non-orthologous sequence - A.thaliana:11 M.jannaschii:102

F4I5S3              	100.00%		Q58294              	100.00%
Bootstrap support for F4I5S3 as seed ortholog is 94%.
Bootstrap support for Q58294 as seed ortholog is 100%.

Group of orthologs #237. Best score 101 bits
Score difference with first non-orthologous sequence - A.thaliana:39 M.jannaschii:101

F4HZG9              	100.00%		Q58216              	100.00%
Q0WUQ7              	6.49%		
Bootstrap support for F4HZG9 as seed ortholog is 87%.
Bootstrap support for Q58216 as seed ortholog is 100%.

Group of orthologs #238. Best score 101 bits
Score difference with first non-orthologous sequence - A.thaliana:101 M.jannaschii:101

Q9SEZ6              	100.00%		Q57599              	100.00%
Bootstrap support for Q9SEZ6 as seed ortholog is 100%.
Bootstrap support for Q57599 as seed ortholog is 100%.

Group of orthologs #239. Best score 100 bits
Score difference with first non-orthologous sequence - A.thaliana:100 M.jannaschii:100

Q9XGM1              	100.00%		Q58032              	100.00%
Bootstrap support for Q9XGM1 as seed ortholog is 100%.
Bootstrap support for Q58032 as seed ortholog is 100%.

Group of orthologs #240. Best score 99 bits
Score difference with first non-orthologous sequence - A.thaliana:99 M.jannaschii:99

Q42340              	100.00%		P54024              	100.00%
Q9SK22              	100.00%		
Q9M8X9              	84.26%		
Bootstrap support for Q42340 as seed ortholog is 100%.
Bootstrap support for Q9SK22 as seed ortholog is 100%.
Bootstrap support for P54024 as seed ortholog is 100%.

Group of orthologs #241. Best score 99 bits
Score difference with first non-orthologous sequence - A.thaliana:99 M.jannaschii:99

Q9MAR2              	100.00%		Q58011              	100.00%
Bootstrap support for Q9MAR2 as seed ortholog is 100%.
Bootstrap support for Q58011 as seed ortholog is 100%.

Group of orthologs #242. Best score 98 bits
Score difference with first non-orthologous sequence - A.thaliana:98 M.jannaschii:98

Q1H5E3              	100.00%		Q60363              	100.00%
Q9M8U2              	61.97%		
F4JV77              	8.97%		
Bootstrap support for Q1H5E3 as seed ortholog is 100%.
Bootstrap support for Q60363 as seed ortholog is 100%.

Group of orthologs #243. Best score 98 bits
Score difference with first non-orthologous sequence - A.thaliana:26 M.jannaschii:98

F4K1R2              	100.00%		Q58276              	100.00%
Bootstrap support for F4K1R2 as seed ortholog is 87%.
Bootstrap support for Q58276 as seed ortholog is 100%.

Group of orthologs #244. Best score 98 bits
Score difference with first non-orthologous sequence - A.thaliana:9 M.jannaschii:98

Q0WP96              	100.00%		Q58343              	100.00%
Bootstrap support for Q0WP96 as seed ortholog is 61%.
Alternative seed ortholog is F4IBS8 (9 bits away from this cluster)
Bootstrap support for Q58343 as seed ortholog is 100%.

Group of orthologs #245. Best score 97 bits
Score difference with first non-orthologous sequence - A.thaliana:97 M.jannaschii:97

Q9SSL0              	100.00%		Q57842              	100.00%
F4KH14              	26.28%		Q58500              	9.05%
Bootstrap support for Q9SSL0 as seed ortholog is 100%.
Bootstrap support for Q57842 as seed ortholog is 100%.

Group of orthologs #246. Best score 97 bits
Score difference with first non-orthologous sequence - A.thaliana:43 M.jannaschii:97

Q9CA67              	100.00%		Q57952              	100.00%
                    	       		Q58915              	13.72%
Bootstrap support for Q9CA67 as seed ortholog is 74%.
Alternative seed ortholog is Q9FLC2 (43 bits away from this cluster)
Bootstrap support for Q57952 as seed ortholog is 100%.

Group of orthologs #247. Best score 96 bits
Score difference with first non-orthologous sequence - A.thaliana:13 M.jannaschii:96

Q9LK94              	100.00%		Q58065              	100.00%
Q9LFA3              	41.55%		
Q93WJ8              	39.73%		
Q9SR59              	35.96%		
P92947              	28.65%		
Bootstrap support for Q9LK94 as seed ortholog is 56%.
Alternative seed ortholog is F4JJJ3 (13 bits away from this cluster)
Bootstrap support for Q58065 as seed ortholog is 100%.

Group of orthologs #248. Best score 95 bits
Score difference with first non-orthologous sequence - A.thaliana:42 M.jannaschii:95

Q93VI3              	100.00%		P54033              	100.00%
P51413              	95.02%		
Bootstrap support for Q93VI3 as seed ortholog is 96%.
Bootstrap support for P54033 as seed ortholog is 100%.

Group of orthologs #249. Best score 94 bits
Score difference with first non-orthologous sequence - A.thaliana:94 M.jannaschii:94

F4I3J0              	100.00%		Q58728              	100.00%
Q9SA73              	24.58%		
Bootstrap support for F4I3J0 as seed ortholog is 100%.
Bootstrap support for Q58728 as seed ortholog is 100%.

Group of orthologs #250. Best score 94 bits
Score difference with first non-orthologous sequence - A.thaliana:94 M.jannaschii:94

Q9M8S8              	100.00%		Q57573              	100.00%
Q94F00              	9.64%		
Bootstrap support for Q9M8S8 as seed ortholog is 100%.
Bootstrap support for Q57573 as seed ortholog is 100%.

Group of orthologs #251. Best score 94 bits
Score difference with first non-orthologous sequence - A.thaliana:94 M.jannaschii:94

Q8L968              	100.00%		Q57679              	100.00%
Bootstrap support for Q8L968 as seed ortholog is 100%.
Bootstrap support for Q57679 as seed ortholog is 100%.

Group of orthologs #252. Best score 94 bits
Score difference with first non-orthologous sequence - A.thaliana:94 M.jannaschii:94

Q9ZPQ3              	100.00%		Q57630              	100.00%
Bootstrap support for Q9ZPQ3 as seed ortholog is 100%.
Bootstrap support for Q57630 as seed ortholog is 100%.

Group of orthologs #253. Best score 92 bits
Score difference with first non-orthologous sequence - A.thaliana:92 M.jannaschii:92

F4JZ42              	100.00%		Q60343              	100.00%
Bootstrap support for F4JZ42 as seed ortholog is 100%.
Bootstrap support for Q60343 as seed ortholog is 100%.

Group of orthologs #254. Best score 92 bits
Score difference with first non-orthologous sequence - A.thaliana:28 M.jannaschii:92

F4K0E6              	100.00%		Q60369              	100.00%
Bootstrap support for F4K0E6 as seed ortholog is 81%.
Bootstrap support for Q60369 as seed ortholog is 100%.

Group of orthologs #255. Best score 91 bits
Score difference with first non-orthologous sequence - A.thaliana:41 M.jannaschii:91

P16181              	100.00%		P54036              	100.00%
P42733              	92.50%		
O65569              	90.83%		
Bootstrap support for P16181 as seed ortholog is 98%.
Bootstrap support for P54036 as seed ortholog is 100%.

Group of orthologs #256. Best score 91 bits
Score difference with first non-orthologous sequence - A.thaliana:91 M.jannaschii:91

Q9MAP3              	100.00%		P54030              	100.00%
Q9FHM3              	40.53%		
Bootstrap support for Q9MAP3 as seed ortholog is 100%.
Bootstrap support for P54030 as seed ortholog is 100%.

Group of orthologs #257. Best score 91 bits
Score difference with first non-orthologous sequence - A.thaliana:7 M.jannaschii:91

Q8S4F6              	100.00%		Q59002              	100.00%
Bootstrap support for Q8S4F6 as seed ortholog is 56%.
Alternative seed ortholog is Q94BX4 (7 bits away from this cluster)
Bootstrap support for Q59002 as seed ortholog is 100%.

Group of orthologs #258. Best score 90 bits
Score difference with first non-orthologous sequence - A.thaliana:90 M.jannaschii:90

Q9FGI6              	100.00%		Q60314              	100.00%
                    	       		P61159              	26.95%
Bootstrap support for Q9FGI6 as seed ortholog is 100%.
Bootstrap support for Q60314 as seed ortholog is 100%.

Group of orthologs #259. Best score 90 bits
Score difference with first non-orthologous sequence - A.thaliana:90 M.jannaschii:90

F4KJ62              	100.00%		Q57741              	100.00%
Bootstrap support for F4KJ62 as seed ortholog is 100%.
Bootstrap support for Q57741 as seed ortholog is 100%.

Group of orthologs #260. Best score 89 bits
Score difference with first non-orthologous sequence - A.thaliana:6 M.jannaschii:89

Q9C6B8              	100.00%		Q58437              	100.00%
Q9S7Z8              	55.81%		
Q940Y5              	55.04%		
Q8RWZ6              	54.09%		
Q9LU77              	53.66%		
Q9SQH6              	36.43%		
Q9LFP6              	23.94%		
Q9FFD0              	23.26%		
Bootstrap support for Q9C6B8 as seed ortholog is 38%.
Alternative seed ortholog is Q9C999 (6 bits away from this cluster)
Bootstrap support for Q58437 as seed ortholog is 100%.

Group of orthologs #261. Best score 89 bits
Score difference with first non-orthologous sequence - A.thaliana:89 M.jannaschii:89

Q8GX93              	100.00%		Q57753              	100.00%
Q8RXR2              	26.04%		
Bootstrap support for Q8GX93 as seed ortholog is 100%.
Bootstrap support for Q57753 as seed ortholog is 100%.

Group of orthologs #262. Best score 89 bits
Score difference with first non-orthologous sequence - A.thaliana:89 M.jannaschii:89

Q8LD46              	100.00%		P54016              	100.00%
Q9M3C3              	100.00%		
Bootstrap support for Q8LD46 as seed ortholog is 100%.
Bootstrap support for Q9M3C3 as seed ortholog is 100%.
Bootstrap support for P54016 as seed ortholog is 100%.

Group of orthologs #263. Best score 88 bits
Score difference with first non-orthologous sequence - A.thaliana:88 M.jannaschii:88

Q9LPU1              	100.00%		Q58481              	100.00%
Bootstrap support for Q9LPU1 as seed ortholog is 100%.
Bootstrap support for Q58481 as seed ortholog is 100%.

Group of orthologs #264. Best score 87 bits
Score difference with first non-orthologous sequence - A.thaliana:87 M.jannaschii:87

Q39216              	100.00%		Q57648              	100.00%
Q9C6C2              	63.95%		
Q39212              	5.67%		
Q39211              	5.52%		
Bootstrap support for Q39216 as seed ortholog is 100%.
Bootstrap support for Q57648 as seed ortholog is 100%.

Group of orthologs #265. Best score 87 bits
Score difference with first non-orthologous sequence - A.thaliana:87 M.jannaschii:87

Q9FJX2              	100.00%		P54038              	100.00%
P51414              	83.00%		
Bootstrap support for Q9FJX2 as seed ortholog is 100%.
Bootstrap support for P54038 as seed ortholog is 100%.

Group of orthologs #266. Best score 87 bits
Score difference with first non-orthologous sequence - A.thaliana:87 M.jannaschii:87

Q84K50              	100.00%		Q57598              	100.00%
Bootstrap support for Q84K50 as seed ortholog is 100%.
Bootstrap support for Q57598 as seed ortholog is 100%.

Group of orthologs #267. Best score 86 bits
Score difference with first non-orthologous sequence - A.thaliana:28 M.jannaschii:86

Q9SRQ4              	100.00%		Q58977              	100.00%
A2RVM4              	62.93%		
Bootstrap support for Q9SRQ4 as seed ortholog is 75%.
Bootstrap support for Q58977 as seed ortholog is 100%.

Group of orthologs #268. Best score 86 bits
Score difference with first non-orthologous sequence - A.thaliana:39 M.jannaschii:86

Q38833              	100.00%		Q57727              	100.00%
Bootstrap support for Q38833 as seed ortholog is 82%.
Bootstrap support for Q57727 as seed ortholog is 100%.

Group of orthologs #269. Best score 86 bits
Score difference with first non-orthologous sequence - A.thaliana:86 M.jannaschii:86

Q6ID68              	100.00%		Q58954              	100.00%
Bootstrap support for Q6ID68 as seed ortholog is 100%.
Bootstrap support for Q58954 as seed ortholog is 100%.

Group of orthologs #270. Best score 84 bits
Score difference with first non-orthologous sequence - A.thaliana:15 M.jannaschii:84

Q9ZUN3              	100.00%		Q58671              	100.00%
B5X0N6              	71.06%		
Q8VYR9              	57.78%		
Bootstrap support for Q9ZUN3 as seed ortholog is 39%.
Alternative seed ortholog is Q9FYC0 (15 bits away from this cluster)
Bootstrap support for Q58671 as seed ortholog is 100%.

Group of orthologs #271. Best score 84 bits
Score difference with first non-orthologous sequence - A.thaliana:84 M.jannaschii:39

F4IHW4              	100.00%		Q57884              	100.00%
Bootstrap support for F4IHW4 as seed ortholog is 100%.
Bootstrap support for Q57884 as seed ortholog is 88%.

Group of orthologs #272. Best score 84 bits
Score difference with first non-orthologous sequence - A.thaliana:84 M.jannaschii:84

F4K6Y8              	100.00%		Q58997              	100.00%
Bootstrap support for F4K6Y8 as seed ortholog is 100%.
Bootstrap support for Q58997 as seed ortholog is 100%.

Group of orthologs #273. Best score 84 bits
Score difference with first non-orthologous sequence - A.thaliana:84 M.jannaschii:84

O82796              	100.00%		Q58989              	100.00%
Bootstrap support for O82796 as seed ortholog is 100%.
Bootstrap support for Q58989 as seed ortholog is 100%.

Group of orthologs #274. Best score 83 bits
Score difference with first non-orthologous sequence - A.thaliana:83 M.jannaschii:83

Q8W4M7              	100.00%		Q58352              	100.00%
Q9CA92              	7.53%		
F4HQE2              	6.97%		
F4HUN4              	6.49%		
Bootstrap support for Q8W4M7 as seed ortholog is 100%.
Bootstrap support for Q58352 as seed ortholog is 100%.

Group of orthologs #275. Best score 83 bits
Score difference with first non-orthologous sequence - A.thaliana:21 M.jannaschii:83

Q9LNK0              	100.00%		Q58548              	100.00%
Q9ZQC0              	93.15%		
Bootstrap support for Q9LNK0 as seed ortholog is 78%.
Bootstrap support for Q58548 as seed ortholog is 100%.

Group of orthologs #276. Best score 83 bits
Score difference with first non-orthologous sequence - A.thaliana:83 M.jannaschii:83

Q8VXU9              	100.00%		Q58338              	100.00%
Bootstrap support for Q8VXU9 as seed ortholog is 100%.
Bootstrap support for Q58338 as seed ortholog is 100%.

Group of orthologs #277. Best score 82 bits
Score difference with first non-orthologous sequence - A.thaliana:7 M.jannaschii:82

F4JM15              	100.00%		Q57849              	100.00%
F4K7C7              	42.68%		
Bootstrap support for F4JM15 as seed ortholog is 49%.
Alternative seed ortholog is Q9C524 (7 bits away from this cluster)
Bootstrap support for Q57849 as seed ortholog is 100%.

Group of orthologs #278. Best score 82 bits
Score difference with first non-orthologous sequence - A.thaliana:82 M.jannaschii:82

P49200              	100.00%		P54029              	100.00%
Q9STY6              	100.00%		
Bootstrap support for P49200 as seed ortholog is 100%.
Bootstrap support for Q9STY6 as seed ortholog is 100%.
Bootstrap support for P54029 as seed ortholog is 100%.

Group of orthologs #279. Best score 82 bits
Score difference with first non-orthologous sequence - A.thaliana:82 M.jannaschii:82

Q8RWW3              	100.00%		Q57907              	100.00%
Bootstrap support for Q8RWW3 as seed ortholog is 100%.
Bootstrap support for Q57907 as seed ortholog is 100%.

Group of orthologs #280. Best score 82 bits
Score difference with first non-orthologous sequence - A.thaliana:82 M.jannaschii:82

Q9SIR5              	100.00%		Q57846              	100.00%
Bootstrap support for Q9SIR5 as seed ortholog is 100%.
Bootstrap support for Q57846 as seed ortholog is 100%.

Group of orthologs #281. Best score 81 bits
Score difference with first non-orthologous sequence - A.thaliana:81 M.jannaschii:81

Q41969              	100.00%		Q57562              	100.00%
F4JFQ0              	26.97%		
Q9LZV2              	14.91%		
Bootstrap support for Q41969 as seed ortholog is 100%.
Bootstrap support for Q57562 as seed ortholog is 100%.

Group of orthologs #282. Best score 81 bits
Score difference with first non-orthologous sequence - A.thaliana:81 M.jannaschii:81

Q42262              	100.00%		P54059              	100.00%
Q9CAV0              	93.65%		
Bootstrap support for Q42262 as seed ortholog is 100%.
Bootstrap support for P54059 as seed ortholog is 100%.

Group of orthologs #283. Best score 81 bits
Score difference with first non-orthologous sequence - A.thaliana:81 M.jannaschii:81

F4I5H7              	100.00%		Q57686              	100.00%
Bootstrap support for F4I5H7 as seed ortholog is 100%.
Bootstrap support for Q57686 as seed ortholog is 100%.

Group of orthologs #284. Best score 81 bits
Score difference with first non-orthologous sequence - A.thaliana:81 M.jannaschii:81

P46086              	100.00%		Q58487              	100.00%
Bootstrap support for P46086 as seed ortholog is 100%.
Bootstrap support for Q58487 as seed ortholog is 100%.

Group of orthologs #285. Best score 80 bits
Score difference with first non-orthologous sequence - A.thaliana:80 M.jannaschii:80

Q8RXU5              	100.00%		P54051              	100.00%
Q9SRK6              	85.59%		
Bootstrap support for Q8RXU5 as seed ortholog is 100%.
Bootstrap support for P54051 as seed ortholog is 100%.

Group of orthologs #286. Best score 79 bits
Score difference with first non-orthologous sequence - A.thaliana:79 M.jannaschii:79

Q8LCC7              	100.00%		P54066              	100.00%
F4K455              	90.00%		
F4JRD3              	47.65%		
Bootstrap support for Q8LCC7 as seed ortholog is 100%.
Bootstrap support for P54066 as seed ortholog is 100%.

Group of orthologs #287. Best score 79 bits
Score difference with first non-orthologous sequence - A.thaliana:79 M.jannaschii:79

Q9LSA9              	100.00%		Q58656              	100.00%
Bootstrap support for Q9LSA9 as seed ortholog is 100%.
Bootstrap support for Q58656 as seed ortholog is 100%.

Group of orthologs #288. Best score 78 bits
Score difference with first non-orthologous sequence - A.thaliana:78 M.jannaschii:78

O48549              	100.00%		P54067              	100.00%
P51430              	93.30%		
Bootstrap support for O48549 as seed ortholog is 100%.
Bootstrap support for P54067 as seed ortholog is 100%.

Group of orthologs #289. Best score 78 bits
Score difference with first non-orthologous sequence - A.thaliana:78 M.jannaschii:26

O23193              	100.00%		Q58821              	100.00%
Bootstrap support for O23193 as seed ortholog is 100%.
Bootstrap support for Q58821 as seed ortholog is 83%.

Group of orthologs #290. Best score 78 bits
Score difference with first non-orthologous sequence - A.thaliana:78 M.jannaschii:78

Q8H1F7              	100.00%		Q60352              	100.00%
Bootstrap support for Q8H1F7 as seed ortholog is 100%.
Bootstrap support for Q60352 as seed ortholog is 100%.

Group of orthologs #291. Best score 77 bits
Score difference with first non-orthologous sequence - A.thaliana:1 M.jannaschii:77

Q9FNM7              	100.00%		Q58969              	100.00%
Q94C75              	51.63%		
Q9FFQ1              	49.12%		
Q9C8S9              	30.26%		
O80792              	29.64%		
Q9LIH9              	10.53%		
Q9SB89              	10.46%		
Q9FFT9              	8.46%		
Q9ZRZ8              	7.27%		
Q8H0U8              	6.77%		
Q9SF41              	6.52%		
O22907              	6.39%		
Q7XJN0              	6.14%		
Q93Y39              	5.76%		
Bootstrap support for Q9FNM7 as seed ortholog is 53%.
Alternative seed ortholog is Q9SA27 (1 bits away from this cluster)
Bootstrap support for Q58969 as seed ortholog is 100%.

Group of orthologs #292. Best score 77 bits
Score difference with first non-orthologous sequence - A.thaliana:77 M.jannaschii:77

Q9ZPV8              	100.00%		Q58436              	100.00%
Bootstrap support for Q9ZPV8 as seed ortholog is 100%.
Bootstrap support for Q58436 as seed ortholog is 100%.

Group of orthologs #293. Best score 75 bits
Score difference with first non-orthologous sequence - A.thaliana:7 M.jannaschii:75

Q9SGS1              	100.00%		Q59069              	100.00%
Bootstrap support for Q9SGS1 as seed ortholog is 54%.
Alternative seed ortholog is Q9C5K6 (7 bits away from this cluster)
Bootstrap support for Q59069 as seed ortholog is 100%.

Group of orthologs #294. Best score 74 bits
Score difference with first non-orthologous sequence - A.thaliana:74 M.jannaschii:74

P49637              	100.00%		P54047              	100.00%
Q9LR33              	100.00%		
Q9LPV3              	28.51%		
Bootstrap support for P49637 as seed ortholog is 100%.
Bootstrap support for Q9LR33 as seed ortholog is 100%.
Bootstrap support for P54047 as seed ortholog is 100%.

Group of orthologs #295. Best score 74 bits
Score difference with first non-orthologous sequence - A.thaliana:74 M.jannaschii:30

Q9LEV3              	100.00%		Q58069              	100.00%
B3H6Z2              	32.23%		Q57892              	9.80%
Bootstrap support for Q9LEV3 as seed ortholog is 100%.
Bootstrap support for Q58069 as seed ortholog is 90%.

Group of orthologs #296. Best score 74 bits
Score difference with first non-orthologous sequence - A.thaliana:74 M.jannaschii:74

Q8L633              	100.00%		Q58897              	100.00%
Q8LGU7              	41.79%		
Bootstrap support for Q8L633 as seed ortholog is 100%.
Bootstrap support for Q58897 as seed ortholog is 100%.

Group of orthologs #297. Best score 74 bits
Score difference with first non-orthologous sequence - A.thaliana:74 M.jannaschii:74

Q8L7N2              	100.00%		Q58827              	100.00%
Bootstrap support for Q8L7N2 as seed ortholog is 100%.
Bootstrap support for Q58827 as seed ortholog is 100%.

Group of orthologs #298. Best score 73 bits
Score difference with first non-orthologous sequence - A.thaliana:17 M.jannaschii:73

Q66GI9              	100.00%		Q58955              	100.00%
Q7XJR2              	43.32%		
Q8GX78              	26.92%		
O82390              	25.61%		
Q3E9A0              	16.19%		
Q9FKV1              	13.46%		
Bootstrap support for Q66GI9 as seed ortholog is 52%.
Alternative seed ortholog is Q94BZ1 (17 bits away from this cluster)
Bootstrap support for Q58955 as seed ortholog is 100%.

Group of orthologs #299. Best score 73 bits
Score difference with first non-orthologous sequence - A.thaliana:73 M.jannaschii:73

Q9LMR3              	100.00%		Q58029              	100.00%
Bootstrap support for Q9LMR3 as seed ortholog is 100%.
Bootstrap support for Q58029 as seed ortholog is 100%.

Group of orthologs #300. Best score 73 bits
Score difference with first non-orthologous sequence - A.thaliana:73 M.jannaschii:73

Q9LTK1              	100.00%		Q58644              	100.00%
Bootstrap support for Q9LTK1 as seed ortholog is 100%.
Bootstrap support for Q58644 as seed ortholog is 100%.

Group of orthologs #301. Best score 72 bits
Score difference with first non-orthologous sequence - A.thaliana:72 M.jannaschii:72

Q38799              	100.00%		Q58092              	100.00%
Q9C6Z3              	30.82%		
O64688              	30.50%		
Q9SAV3              	23.43%		
Bootstrap support for Q38799 as seed ortholog is 100%.
Bootstrap support for Q58092 as seed ortholog is 100%.

Group of orthologs #302. Best score 71 bits
Score difference with first non-orthologous sequence - A.thaliana:17 M.jannaschii:71

Q8LB01              	100.00%		Q57865              	100.00%
O80574              	81.42%		
Bootstrap support for Q8LB01 as seed ortholog is 68%.
Alternative seed ortholog is Q9FJ82 (17 bits away from this cluster)
Bootstrap support for Q57865 as seed ortholog is 100%.

Group of orthologs #303. Best score 71 bits
Score difference with first non-orthologous sequence - A.thaliana:23 M.jannaschii:71

Q9FKI4              	100.00%		Q58925              	100.00%
Q8LGI8              	11.52%		
Bootstrap support for Q9FKI4 as seed ortholog is 83%.
Bootstrap support for Q58925 as seed ortholog is 100%.

Group of orthologs #304. Best score 71 bits
Score difference with first non-orthologous sequence - A.thaliana:71 M.jannaschii:71

Q9M1J8              	100.00%		Q57977              	100.00%
Bootstrap support for Q9M1J8 as seed ortholog is 100%.
Bootstrap support for Q57977 as seed ortholog is 100%.

Group of orthologs #305. Best score 70 bits
Score difference with first non-orthologous sequence - A.thaliana:70 M.jannaschii:70

Q8RWU6              	100.00%		Q58916              	100.00%
Q8S396              	100.00%		Q60362              	100.00%
Q56XP4              	14.98%		
Q84WG1              	14.26%		
Q8S397              	14.26%		
Q68KI4              	13.84%		
Q3YL57              	5.37%		
Bootstrap support for Q8RWU6 as seed ortholog is 100%.
Bootstrap support for Q8S396 as seed ortholog is 100%.
Bootstrap support for Q58916 as seed ortholog is 100%.
Bootstrap support for Q60362 as seed ortholog is 100%.

Group of orthologs #306. Best score 70 bits
Score difference with first non-orthologous sequence - A.thaliana:70 M.jannaschii:70

Q8GS60              	100.00%		Q60341              	100.00%
                    	       		Q58135              	18.41%
                    	       		Q58744              	12.21%
                    	       		Q60316              	5.62%
Bootstrap support for Q8GS60 as seed ortholog is 100%.
Bootstrap support for Q60341 as seed ortholog is 100%.

Group of orthologs #307. Best score 70 bits
Score difference with first non-orthologous sequence - A.thaliana:70 M.jannaschii:70

Q8S4Y1              	100.00%		Q58944              	100.00%
Q9FIK7              	80.73%		
Q56WD9              	21.51%		
Q570C8              	20.67%		
Bootstrap support for Q8S4Y1 as seed ortholog is 100%.
Bootstrap support for Q58944 as seed ortholog is 100%.

Group of orthologs #308. Best score 70 bits
Score difference with first non-orthologous sequence - A.thaliana:70 M.jannaschii:70

Q9SVR0              	100.00%		P54023              	100.00%
Q9FKC0              	93.06%		
Q9LRX8              	91.62%		
Q9SFU1              	91.33%		
Bootstrap support for Q9SVR0 as seed ortholog is 100%.
Bootstrap support for P54023 as seed ortholog is 100%.

Group of orthologs #309. Best score 70 bits
Score difference with first non-orthologous sequence - A.thaliana:70 M.jannaschii:70

Q37165              	100.00%		Q57940              	100.00%
P92558              	26.50%		
Q1ZXW0              	23.19%		
Bootstrap support for Q37165 as seed ortholog is 100%.
Bootstrap support for Q57940 as seed ortholog is 100%.

Group of orthologs #310. Best score 70 bits
Score difference with first non-orthologous sequence - A.thaliana:70 M.jannaschii:70

Q9ZQI9              	100.00%		Q58982              	100.00%
Bootstrap support for Q9ZQI9 as seed ortholog is 100%.
Bootstrap support for Q58982 as seed ortholog is 100%.

Group of orthologs #311. Best score 68 bits
Score difference with first non-orthologous sequence - A.thaliana:68 M.jannaschii:68

Q9CAA8              	100.00%		Q57711              	100.00%
Q9SHZ8              	34.21%		Q58350              	43.46%
Q9SY02              	30.46%		O06917              	16.18%
Q9ZUW3              	30.12%		
Q9LFL5              	29.42%		
Q9FRI5              	28.94%		
Q9M2Y7              	28.11%		
Q9LN01              	28.04%		
Q9LNU6              	27.90%		
Q9SVP7              	27.83%		
Q9FHF9              	27.76%		
Q9S7F4              	27.69%		
Q9SMZ2              	27.55%		
Q9FIB2              	27.41%		
Q3E6Q1              	27.13%		
O23169              	26.86%		
Q9LYU9              	26.72%		
Q5G1T1              	26.58%		
O23266              	26.51%		
Q9LYV3              	26.51%		
Q9LZ19              	26.44%		
O82380              	26.30%		
Q9LW63              	26.16%		
O81767              	26.02%		
Q9SN39              	26.02%		
Q9LTV8              	25.82%		
Q7Y211              	25.61%		
Q9SUH6              	25.54%		
Q9M1V3              	25.47%		
Q9LUJ2              	25.19%		
Q9SR82              	25.19%		
Q56XI1              	25.12%		
Q9M4P3              	24.98%		
Q9LIC3              	24.98%		
Q8S9M4              	24.91%		
F4I4G1              	24.77%		
Q9LIQ7              	24.77%		
Q9STF3              	24.50%		
Q9FK93              	24.43%		
Q9M9E2              	24.43%		
P0C899              	24.36%		
P0C898              	24.29%		
Q9SIT7              	24.29%		
Q8LK93              	24.08%		
Q9FXB9              	24.08%		
Q9SI53              	24.08%		
O23337              	23.94%		
Q0WN60              	23.87%		
Q9M2E7              	23.59%		
Q9LW32              	23.53%		
Q9SS60              	23.53%		
Q0WSH6              	23.25%		
Q9LSL8              	22.90%		
Q9FI80              	22.76%		
Q9SV26              	22.55%		
O49619              	22.21%		
P93011              	22.07%		
Q9CAY1              	22.07%		
Q9FJY7              	22.07%		
Q0WQW5              	21.93%		
Q9ZVF4              	21.86%		
Q9FND6              	21.86%		
Q9FFG8              	21.51%		
Q9LUL5              	21.51%		
Q9C6T2              	21.37%		
P93005              	21.37%		
Q9FK33              	21.17%		
Q9SZT8              	20.89%		
O49287              	20.75%		
Q9CA54              	20.54%		
Q9FXA9              	20.47%		
Q9FFN1              	20.33%		
Q9FND7              	20.26%		
Q9LXY5              	20.12%		
Q9SN85              	19.92%		
Q9SVA5              	19.85%		
Q683I9              	19.85%		
Q9LFI1              	19.78%		
Q8VYH0              	19.43%		
Q9FX24              	19.43%		
Q9FG16              	19.29%		
Q9FXH1              	19.15%		
Q9CA56              	19.08%		
Q9C9I6              	19.01%		
Q9MAT2              	18.95%		
Q9C507              	18.95%		
Q9STS9              	18.81%		
Q9LRV9              	18.81%		
Q9C9H9              	18.60%		
Q9FWA6              	18.46%		
Q9STE1              	18.46%		
Q9SS83              	18.32%		
Q9LHN5              	18.25%		
Q9SJK9              	18.11%		
Q7XJN6              	17.97%		
Q9LXE8              	17.90%		
Q9MA85              	17.83%		
O04659              	17.83%		
Q9FLX6              	17.70%		
Q9SS97              	17.70%		
Q84MA3              	17.63%		
Q9FI49              	17.63%		
Q9SKQ4              	17.63%		
O64705              	17.35%		
Q9LUC2              	17.21%		
Q9LR69              	17.00%		
P0C8Q2              	16.93%		
O82363              	16.86%		
P0C8Q8              	16.86%		
Q9LU94              	16.86%		
Q9FM64              	16.38%		
Q9SVH0              	16.24%		
Q9FHR3              	16.17%		
Q9LSB8              	16.17%		
Q9LS72              	16.03%		
Q9SJZ3              	15.96%		
Q9SUF9              	15.82%		
O64766              	15.75%		
Q9LJR6              	15.68%		
Q9LNP2              	15.68%		
Q9ZUT5              	15.68%		
Q9C8L6              	15.68%		
Q9FLZ9              	15.68%		
Q9SCT2              	15.61%		
Q9SZK1              	15.61%		
Q9LUS3              	15.54%		
Q9SIL5              	15.54%		
Q9MA95              	15.48%		
Q9LND4              	15.41%		
O04590              	15.34%		
Q9LIE7              	15.20%		
Q9ZQ74              	15.06%		
P0C7R0              	14.92%		
Q9C866              	14.92%		
Q3E9N1              	14.85%		
Q9M2Y4              	14.85%		
O22137              	14.71%		
Q1PFQ9              	14.37%		
Q9MA50              	14.30%		
Q9FIF7              	14.16%		
Q9FNN7              	13.95%		
Q9LT48              	13.81%		
O23491              	13.74%		
Q3ECB8              	13.67%		
Q9FNN9              	13.67%		
Q9SB36              	13.60%		
Q9SII7              	13.60%		
Q1PFA6              	13.60%		
Q9LP03              	13.53%		
Q9FMA1              	13.46%		
Q9FIH2              	13.39%		
Q4V389              	13.32%		
Q9XE98              	13.32%		
Q0WVP2              	13.32%		
O80647              	13.19%		
Q9LRV2              	13.12%		
Q1PEU4              	12.98%		
Q9SR01              	12.84%		
Q9SJG6              	12.77%		
O65543              	12.63%		
O80488              	12.35%		
Q9LR72              	12.21%		
Q5XEY7              	12.21%		
Q9FJY9              	12.14%		
Q9ZQA1              	12.07%		
Q9C9I3              	12.07%		
Q9SJ73              	12.01%		
O49680              	11.87%		
Q9C501              	11.87%		
Q9C7V5              	11.80%		
Q9ZVG8              	11.73%		
Q9LVF9              	11.45%		
O49399              	11.38%		
P0C8Q5              	11.10%		
Q0WNP3              	10.76%		
Q9LJI9              	10.76%		
Q9LJJ1              	10.76%		
Q9ZQE5              	10.69%		
Q9FG85              	10.55%		
Q0WN01              	10.48%		
Q9SUU7              	10.13%		
F4I671              	9.99%		
Q9LJ69              	9.92%		
Q9SY75              	9.85%		
Q9FGL1              	9.44%		
Q9M9R6              	8.19%		
Q8S8Q7              	8.19%		
Q9C6G2              	7.56%		
Bootstrap support for Q9CAA8 as seed ortholog is 100%.
Bootstrap support for Q57711 as seed ortholog is 100%.

Group of orthologs #312. Best score 68 bits
Score difference with first non-orthologous sequence - A.thaliana:68 M.jannaschii:68

Q9C8F7              	100.00%		P54061              	100.00%
Q8VZ19              	93.67%		
Bootstrap support for Q9C8F7 as seed ortholog is 100%.
Bootstrap support for P54061 as seed ortholog is 100%.

Group of orthologs #313. Best score 67 bits
Score difference with first non-orthologous sequence - A.thaliana:67 M.jannaschii:67

Q43292              	100.00%		P54011              	100.00%
Q8LEM8              	93.23%		
Q8LFH7              	89.47%		
Bootstrap support for Q43292 as seed ortholog is 100%.
Bootstrap support for P54011 as seed ortholog is 100%.

Group of orthologs #314. Best score 67 bits
Score difference with first non-orthologous sequence - A.thaliana:67 M.jannaschii:67

Q9C505              	100.00%		Q58625              	100.00%
Q9XI91              	86.77%		
Q93VP3              	85.99%		
Bootstrap support for Q9C505 as seed ortholog is 100%.
Bootstrap support for Q58625 as seed ortholog is 100%.

Group of orthologs #315. Best score 67 bits
Score difference with first non-orthologous sequence - A.thaliana:67 M.jannaschii:67

P49211              	100.00%		P54010              	100.00%
Q9FHG2              	100.00%		
Bootstrap support for P49211 as seed ortholog is 100%.
Bootstrap support for Q9FHG2 as seed ortholog is 100%.
Bootstrap support for P54010 as seed ortholog is 100%.

Group of orthologs #316. Best score 67 bits
Score difference with first non-orthologous sequence - A.thaliana:67 M.jannaschii:67

F4I354              	100.00%		Q58103              	100.00%
Bootstrap support for F4I354 as seed ortholog is 100%.
Bootstrap support for Q58103 as seed ortholog is 100%.

Group of orthologs #317. Best score 67 bits
Score difference with first non-orthologous sequence - A.thaliana:67 M.jannaschii:67

Q9STT2              	100.00%		Q58040              	100.00%
Bootstrap support for Q9STT2 as seed ortholog is 100%.
Bootstrap support for Q58040 as seed ortholog is 100%.

Group of orthologs #318. Best score 66 bits
Score difference with first non-orthologous sequence - A.thaliana:66 M.jannaschii:66

Q84TF6              	100.00%		Q57951              	100.00%
Q9C9G5              	100.00%		Q57997              	100.00%
Q84JS5              	18.18%		
B9DG73              	14.55%		
Q93W91              	14.18%		
O82240              	10.91%		
Q8LGG8              	10.04%		
Q9LYJ2              	8.11%		
Q9LSP5              	5.02%		
Bootstrap support for Q84TF6 as seed ortholog is 100%.
Bootstrap support for Q9C9G5 as seed ortholog is 100%.
Bootstrap support for Q57951 as seed ortholog is 100%.
Bootstrap support for Q57997 as seed ortholog is 100%.

Group of orthologs #319. Best score 66 bits
Score difference with first non-orthologous sequence - A.thaliana:66 M.jannaschii:66

P48641              	100.00%		Q58053              	100.00%
P42770              	44.81%		
Q9M5K3              	13.53%		
Q9M5K2              	13.42%		
F4JLP5              	10.17%		
Bootstrap support for P48641 as seed ortholog is 100%.
Bootstrap support for Q58053 as seed ortholog is 100%.

Group of orthologs #320. Best score 66 bits
Score difference with first non-orthologous sequence - A.thaliana:66 M.jannaschii:66

Q9SU38              	100.00%		Q59049              	100.00%
Q9SUW2              	100.00%		
P31166              	67.46%		
Q9LFP0              	67.46%		
Q42563              	65.76%		
Bootstrap support for Q9SU38 as seed ortholog is 100%.
Bootstrap support for Q9SUW2 as seed ortholog is 100%.
Bootstrap support for Q59049 as seed ortholog is 100%.

Group of orthologs #321. Best score 66 bits
Score difference with first non-orthologous sequence - A.thaliana:18 M.jannaschii:66

Q9FHM7              	100.00%		Q58237              	100.00%
Q9FM19              	53.92%		
Q9SRH6              	53.14%		
Q9CAR7              	51.96%		
Bootstrap support for Q9FHM7 as seed ortholog is 78%.
Bootstrap support for Q58237 as seed ortholog is 100%.

Group of orthologs #322. Best score 66 bits
Score difference with first non-orthologous sequence - A.thaliana:66 M.jannaschii:66

O82782              	100.00%		Q58927              	100.00%
                    	       		Q58114              	10.10%
Bootstrap support for O82782 as seed ortholog is 100%.
Bootstrap support for Q58927 as seed ortholog is 100%.

Group of orthologs #323. Best score 65 bits
Score difference with first non-orthologous sequence - A.thaliana:65 M.jannaschii:65

P51420              	100.00%		P54009              	100.00%
Q9STR1              	97.11%		
Q9SLL7              	91.33%		
Bootstrap support for P51420 as seed ortholog is 100%.
Bootstrap support for P54009 as seed ortholog is 100%.

Group of orthologs #324. Best score 65 bits
Score difference with first non-orthologous sequence - A.thaliana:9 M.jannaschii:65

F4JPZ7              	100.00%		Q57899              	100.00%
Bootstrap support for F4JPZ7 as seed ortholog is 56%.
Alternative seed ortholog is F4JTK8 (9 bits away from this cluster)
Bootstrap support for Q57899 as seed ortholog is 100%.

Group of orthologs #325. Best score 65 bits
Score difference with first non-orthologous sequence - A.thaliana:1 M.jannaschii:65

P54873              	100.00%		Q58941              	100.00%
Bootstrap support for P54873 as seed ortholog is 49%.
Alternative seed ortholog is P49243 (1 bits away from this cluster)
Bootstrap support for Q58941 as seed ortholog is 100%.

Group of orthologs #326. Best score 64 bits
Score difference with first non-orthologous sequence - A.thaliana:20 M.jannaschii:64

Q9FJI1              	100.00%		Q58450              	100.00%
Bootstrap support for Q9FJI1 as seed ortholog is 75%.
Bootstrap support for Q58450 as seed ortholog is 100%.

Group of orthologs #327. Best score 63 bits
Score difference with first non-orthologous sequence - A.thaliana:63 M.jannaschii:63

Q9FFE0              	100.00%		Q58060              	100.00%
Q9M8R9              	95.96%		
Q9FH13              	65.07%		
Bootstrap support for Q9FFE0 as seed ortholog is 100%.
Bootstrap support for Q58060 as seed ortholog is 100%.

Group of orthologs #328. Best score 62 bits
Score difference with first non-orthologous sequence - A.thaliana:62 M.jannaschii:62

F4JWT7              	100.00%		Q57983              	100.00%
                    	       		Q58600              	37.02%
Bootstrap support for F4JWT7 as seed ortholog is 100%.
Bootstrap support for Q57983 as seed ortholog is 100%.

Group of orthologs #329. Best score 62 bits
Score difference with first non-orthologous sequence - A.thaliana:62 M.jannaschii:62

O23290              	100.00%		P54027              	100.00%
Bootstrap support for O23290 as seed ortholog is 100%.
Bootstrap support for P54027 as seed ortholog is 100%.

Group of orthologs #330. Best score 60 bits
Score difference with first non-orthologous sequence - A.thaliana:60 M.jannaschii:60

F4I4W2              	100.00%		Q59014              	100.00%
Q9SL92              	86.42%		
Bootstrap support for F4I4W2 as seed ortholog is 100%.
Bootstrap support for Q59014 as seed ortholog is 100%.

Group of orthologs #331. Best score 60 bits
Score difference with first non-orthologous sequence - A.thaliana:60 M.jannaschii:60

P34789              	100.00%		P54065              	100.00%
Q9SR73              	100.00%		
Bootstrap support for P34789 as seed ortholog is 100%.
Bootstrap support for Q9SR73 as seed ortholog is 100%.
Bootstrap support for P54065 as seed ortholog is 100%.

Group of orthologs #332. Best score 60 bits
Score difference with first non-orthologous sequence - A.thaliana:8 M.jannaschii:60

P38421              	100.00%		Q57840              	100.00%
A6QRA1              	5.37%		
Bootstrap support for P38421 as seed ortholog is 66%.
Alternative seed ortholog is Q9M9Y6 (8 bits away from this cluster)
Bootstrap support for Q57840 as seed ortholog is 100%.

Group of orthologs #333. Best score 60 bits
Score difference with first non-orthologous sequence - A.thaliana:60 M.jannaschii:60

Q9SLN0              	100.00%		Q58619              	100.00%
                    	       		Q57964              	7.58%
Bootstrap support for Q9SLN0 as seed ortholog is 100%.
Bootstrap support for Q58619 as seed ortholog is 100%.

Group of orthologs #334. Best score 60 bits
Score difference with first non-orthologous sequence - A.thaliana:60 M.jannaschii:60

Q8GWL1              	100.00%		Q57703              	100.00%
Bootstrap support for Q8GWL1 as seed ortholog is 100%.
Bootstrap support for Q57703 as seed ortholog is 100%.

Group of orthologs #335. Best score 60 bits
Score difference with first non-orthologous sequence - A.thaliana:60 M.jannaschii:60

Q9ZVJ2              	100.00%		Q58220              	100.00%
Bootstrap support for Q9ZVJ2 as seed ortholog is 100%.
Bootstrap support for Q58220 as seed ortholog is 100%.

Group of orthologs #336. Best score 59 bits
Score difference with first non-orthologous sequence - A.thaliana:59 M.jannaschii:59

Q9LZM3              	100.00%		Q58323              	100.00%
Q8GXR5              	87.79%		
Bootstrap support for Q9LZM3 as seed ortholog is 100%.
Bootstrap support for Q58323 as seed ortholog is 100%.

Group of orthologs #337. Best score 58 bits
Score difference with first non-orthologous sequence - A.thaliana:2 M.jannaschii:58

Q9STH1              	100.00%		Q58741              	100.00%
Q9LNB6              	75.83%		Q58823              	5.64%
Q5XEP2              	75.17%		
Q84JR9              	6.92%		
Q9MAH1              	6.26%		
Q93YR3              	5.12%		
Bootstrap support for Q9STH1 as seed ortholog is 44%.
Alternative seed ortholog is Q9SF54 (2 bits away from this cluster)
Bootstrap support for Q58741 as seed ortholog is 100%.

Group of orthologs #338. Best score 58 bits
Score difference with first non-orthologous sequence - A.thaliana:58 M.jannaschii:58

O81004              	100.00%		Q57768              	100.00%
Q9LYE2              	42.62%		
Bootstrap support for O81004 as seed ortholog is 100%.
Bootstrap support for Q57768 as seed ortholog is 100%.

Group of orthologs #339. Best score 58 bits
Score difference with first non-orthologous sequence - A.thaliana:58 M.jannaschii:58

Q8GZ75              	100.00%		Q57639              	100.00%
Bootstrap support for Q8GZ75 as seed ortholog is 100%.
Bootstrap support for Q57639 as seed ortholog is 100%.

Group of orthologs #340. Best score 57 bits
Score difference with first non-orthologous sequence - A.thaliana:57 M.jannaschii:57

F4K1D3              	100.00%		Q57887              	100.00%
Q9SJB9              	100.00%		
Bootstrap support for F4K1D3 as seed ortholog is 100%.
Bootstrap support for Q9SJB9 as seed ortholog is 100%.
Bootstrap support for Q57887 as seed ortholog is 100%.

Group of orthologs #341. Best score 57 bits
Score difference with first non-orthologous sequence - A.thaliana:57 M.jannaschii:57

O22211              	100.00%		Q58513              	100.00%
Q9M2M5              	100.00%		
Bootstrap support for O22211 as seed ortholog is 100%.
Bootstrap support for Q9M2M5 as seed ortholog is 100%.
Bootstrap support for Q58513 as seed ortholog is 100%.

Group of orthologs #342. Best score 57 bits
Score difference with first non-orthologous sequence - A.thaliana:57 M.jannaschii:57

F4JCQ3              	100.00%		Q58829              	100.00%
Bootstrap support for F4JCQ3 as seed ortholog is 100%.
Bootstrap support for Q58829 as seed ortholog is 100%.

Group of orthologs #343. Best score 57 bits
Score difference with first non-orthologous sequence - A.thaliana:57 M.jannaschii:57

Q680P8              	100.00%		P54110              	100.00%
Bootstrap support for Q680P8 as seed ortholog is 100%.
Bootstrap support for P54110 as seed ortholog is 100%.

Group of orthologs #344. Best score 56 bits
Score difference with first non-orthologous sequence - A.thaliana:56 M.jannaschii:56

Q9SKP6              	100.00%		Q58923              	100.00%
P48491              	46.11%		
Bootstrap support for Q9SKP6 as seed ortholog is 100%.
Bootstrap support for Q58923 as seed ortholog is 100%.

Group of orthologs #345. Best score 56 bits
Score difference with first non-orthologous sequence - A.thaliana:56 M.jannaschii:56

Q9CA40              	100.00%		Q58549              	100.00%
Bootstrap support for Q9CA40 as seed ortholog is 100%.
Bootstrap support for Q58549 as seed ortholog is 100%.

Group of orthologs #346. Best score 54 bits
Score difference with first non-orthologous sequence - A.thaliana:54 M.jannaschii:54

Q9SYA6              	100.00%		Q57649              	100.00%
Q8LFJ6              	82.83%		
Bootstrap support for Q9SYA6 as seed ortholog is 100%.
Bootstrap support for Q57649 as seed ortholog is 100%.

Group of orthologs #347. Best score 53 bits
Score difference with first non-orthologous sequence - A.thaliana:53 M.jannaschii:53

B9DH75              	100.00%		Q57655              	100.00%
Q949P3              	87.22%		
Q8W4Q1              	82.56%		
Bootstrap support for B9DH75 as seed ortholog is 100%.
Bootstrap support for Q57655 as seed ortholog is 100%.

Group of orthologs #348. Best score 52 bits
Score difference with first non-orthologous sequence - A.thaliana:52 M.jannaschii:52

Q9M3D2              	100.00%		P54035              	100.00%
Q9SF53              	100.00%		
Q9LZ41              	96.69%		
O80626              	95.03%		
Bootstrap support for Q9M3D2 as seed ortholog is 100%.
Bootstrap support for Q9SF53 as seed ortholog is 100%.
Bootstrap support for P54035 as seed ortholog is 100%.

Group of orthologs #349. Best score 52 bits
Score difference with first non-orthologous sequence - A.thaliana:52 M.jannaschii:52

Q42351              	100.00%		P54053              	100.00%
Q9FE65              	97.84%		
Q9LJW6              	92.97%		
Bootstrap support for Q42351 as seed ortholog is 100%.
Bootstrap support for P54053 as seed ortholog is 100%.

Group of orthologs #350. Best score 52 bits
Score difference with first non-orthologous sequence - A.thaliana:52 M.jannaschii:52

O82346              	100.00%		Q58716              	100.00%
F4HP91              	71.07%		
Bootstrap support for O82346 as seed ortholog is 100%.
Bootstrap support for Q58716 as seed ortholog is 100%.

Group of orthologs #351. Best score 50 bits
Score difference with first non-orthologous sequence - A.thaliana:50 M.jannaschii:50

P56755              	100.00%		P81292              	100.00%
Q42599              	8.23%		Q57934              	20.96%
Q9FX83              	8.23%		Q58344              	10.65%
Bootstrap support for P56755 as seed ortholog is 100%.
Bootstrap support for P81292 as seed ortholog is 100%.

Group of orthologs #352. Best score 50 bits
Score difference with first non-orthologous sequence - A.thaliana:5 M.jannaschii:50

Q6NQE2              	100.00%		Q58483              	100.00%
F4K0D0              	70.33%		Q58141              	26.63%
O23207              	64.29%		
Q9LUX9              	62.36%		
Bootstrap support for Q6NQE2 as seed ortholog is 62%.
Alternative seed ortholog is Q9LK88 (5 bits away from this cluster)
Bootstrap support for Q58483 as seed ortholog is 100%.

Group of orthologs #353. Best score 49 bits
Score difference with first non-orthologous sequence - A.thaliana:49 M.jannaschii:49

B3H5X2              	100.00%		P54028              	100.00%
Q9M2F1              	78.79%		
O64650              	75.76%		
Q8L953              	73.48%		
Bootstrap support for B3H5X2 as seed ortholog is 100%.
Bootstrap support for P54028 as seed ortholog is 100%.

Group of orthologs #354. Best score 49 bits
Score difference with first non-orthologous sequence - A.thaliana:49 M.jannaschii:49

Q9M1E8              	100.00%		Q58819              	100.00%
Q9LSS3              	72.45%		
Q2V3Q6              	27.31%		
Bootstrap support for Q9M1E8 as seed ortholog is 100%.
Bootstrap support for Q58819 as seed ortholog is 100%.

Group of orthologs #355. Best score 49 bits
Score difference with first non-orthologous sequence - A.thaliana:49 M.jannaschii:49

O48721              	100.00%		Q58401              	100.00%
Bootstrap support for O48721 as seed ortholog is 100%.
Bootstrap support for Q58401 as seed ortholog is 100%.

Group of orthologs #356. Best score 48 bits
Score difference with first non-orthologous sequence - A.thaliana:5 M.jannaschii:48

Q948K6              	100.00%		Q58735              	100.00%
Q9SJ11              	50.41%		
O04157              	48.51%		
Q948K8              	47.70%		
Q9LS94              	44.99%		
Q9LW76              	43.90%		
Q9C820              	43.63%		
Q9XI98              	43.09%		
Q38922              	20.33%		
Q39222              	19.51%		
Q1PEX3              	19.24%		
Q9FJF1              	19.24%		
O23561              	19.24%		
O24466              	18.97%		
Q9LK99              	18.97%		
Q9LZD4              	18.70%		
Q9SF91              	18.43%		
P28186              	18.43%		
O04486              	18.43%		
P92963              	18.16%		
Q9SN35              	18.16%		
Q9LFT9              	17.89%		
Q9FK68              	17.89%		
Q0WQN4              	17.89%		
Q9S810              	17.89%		
P28188              	17.34%		
Q9C9U7              	17.34%		
O49513              	17.34%		
O80501              	17.07%		
Q9FPJ4              	17.07%		
Q9SEH3              	17.07%		
Q9SMR4              	17.07%		
Q9LH50              	16.80%		
Q9ZRE2              	16.80%		
P28187              	16.53%		
Q9SID8              	16.53%		
Q9FIF9              	16.26%		
Q9SIP0              	16.26%		
P28185              	15.72%		
Q9SMQ6              	15.72%		
Q9SN68              	15.72%		
Q9SRS5              	15.72%		
O23657              	15.72%		
Q9LNW1              	15.72%		
P31582              	15.45%		
Q96283              	15.45%		
Q9LV79              	15.45%		
Q9FJN8              	15.18%		
P19892              	15.18%		
Q9FE79              	15.18%		
Q9FGK5              	14.36%		
P41917              	14.36%		
Q8H156              	14.36%		
Q9LNK1              	14.09%		
O49841              	13.55%		
Q9CB01              	13.28%		
Q9FLQ3              	12.74%		
Q9SF92              	11.11%		
Q9XGU0              	6.78%		
O82480              	6.23%		
Bootstrap support for Q948K6 as seed ortholog is 55%.
Alternative seed ortholog is Q9LIK1 (5 bits away from this cluster)
Bootstrap support for Q58735 as seed ortholog is 100%.

Group of orthologs #357. Best score 48 bits
Score difference with first non-orthologous sequence - A.thaliana:48 M.jannaschii:48

P60039              	100.00%		P54046              	100.00%
P60040              	91.92%		
Q9LHP1              	91.22%		
Q9SAI5              	33.95%		
Bootstrap support for P60039 as seed ortholog is 100%.
Bootstrap support for P54046 as seed ortholog is 100%.

Group of orthologs #358. Best score 46 bits
Score difference with first non-orthologous sequence - A.thaliana:46 M.jannaschii:46

Q9FHQ3              	100.00%		Q57733              	100.00%
Q9LNW0              	100.00%		
Q9XIE3              	88.43%		
Q9ZW31              	77.99%		
P19036              	63.06%		
P13853              	62.31%		
P19037              	62.31%		
Q38806              	36.19%		
P29830              	15.30%		
O81822              	14.55%		
P31170              	12.31%		
Q96331              	10.45%		
O49710              	9.70%		
Q9SSQ8              	9.33%		
O64564              	8.21%		
Q9SYG1              	7.84%		
Q9FGM9              	7.46%		
Bootstrap support for Q9FHQ3 as seed ortholog is 100%.
Bootstrap support for Q9LNW0 as seed ortholog is 100%.
Bootstrap support for Q57733 as seed ortholog is 100%.

Group of orthologs #359. Best score 46 bits
Score difference with first non-orthologous sequence - A.thaliana:46 M.jannaschii:46

Q9LRS0              	100.00%		Q58746              	100.00%
Q9LRR9              	95.39%		
O49506              	85.44%		
Q9LJH5              	59.29%		
Q24JJ8              	58.40%		
Bootstrap support for Q9LRS0 as seed ortholog is 100%.
Bootstrap support for Q58746 as seed ortholog is 100%.

Group of orthologs #360. Best score 45 bits
Score difference with first non-orthologous sequence - A.thaliana:45 M.jannaschii:45

Q9FIQ3              	100.00%		Q58909              	100.00%
Q9M8T3              	33.87%		
Bootstrap support for Q9FIQ3 as seed ortholog is 100%.
Bootstrap support for Q58909 as seed ortholog is 100%.

Group of orthologs #361. Best score 44 bits
Score difference with first non-orthologous sequence - A.thaliana:44 M.jannaschii:44

Q39227              	100.00%		Q58630              	100.00%
Q94JS4              	100.00%		Q58316              	100.00%
Q9LM02              	31.34%		
Bootstrap support for Q39227 as seed ortholog is 100%.
Bootstrap support for Q94JS4 as seed ortholog is 100%.
Bootstrap support for Q58630 as seed ortholog is 100%.
Bootstrap support for Q58316 as seed ortholog is 100%.

Group of orthologs #362. Best score 44 bits
Score difference with first non-orthologous sequence - A.thaliana:44 M.jannaschii:44

Q9FFT6              	100.00%		Q57902              	100.00%
P41568              	71.43%		
Q94JV4              	70.88%		
Q9FFV1              	70.88%		
Bootstrap support for Q9FFT6 as seed ortholog is 100%.
Bootstrap support for Q57902 as seed ortholog is 100%.

Group of orthologs #363. Best score 44 bits
Score difference with first non-orthologous sequence - A.thaliana:44 M.jannaschii:44

Q6AWU6              	100.00%		Q57551              	100.00%
O80562              	50.47%		
Q0WP12              	48.82%		
Bootstrap support for Q6AWU6 as seed ortholog is 100%.
Bootstrap support for Q57551 as seed ortholog is 100%.

Group of orthologs #364. Best score 44 bits
Score difference with first non-orthologous sequence - A.thaliana:44 M.jannaschii:44

Q9T043              	100.00%		P54054              	100.00%
Q9SIM4              	93.12%		
Bootstrap support for Q9T043 as seed ortholog is 100%.
Bootstrap support for P54054 as seed ortholog is 100%.

Group of orthologs #365. Best score 43 bits
Score difference with first non-orthologous sequence - A.thaliana:43 M.jannaschii:43

Q9C8L4              	100.00%		Q58298              	100.00%
O24496              	8.27%		Q57744              	6.91%
Q8LDW8              	5.15%		
Bootstrap support for Q9C8L4 as seed ortholog is 100%.
Bootstrap support for Q58298 as seed ortholog is 100%.

Group of orthologs #366. Best score 42 bits
Score difference with first non-orthologous sequence - A.thaliana:42 M.jannaschii:42

Q9XI68              	100.00%		Q58845              	100.00%
Q9XI69              	89.09%		
Q9S746              	38.67%		
Q93ZK1              	36.59%		
Q94KD2              	34.72%		
Q9SSM2              	34.41%		
Q66GI5              	33.58%		
F4KEQ5              	32.64%		
Bootstrap support for Q9XI68 as seed ortholog is 100%.
Bootstrap support for Q58845 as seed ortholog is 100%.