###################################
300 groups of orthologs
807 in-paralogs from A.thaliana
307 in-paralogs from C.trachomatis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 874 bits
Score difference with first non-orthologous sequence - A.thaliana:596 C.trachomatis:874

F4JLM5              	100.00%		O84022              	100.00%
Bootstrap support for F4JLM5 as seed ortholog is 100%.
Bootstrap support for O84022 as seed ortholog is 100%.

Group of orthologs #2. Best score 810 bits
Score difference with first non-orthologous sequence - A.thaliana:722 C.trachomatis:810

Q9XEA0              	100.00%		O84211              	100.00%
Bootstrap support for Q9XEA0 as seed ortholog is 100%.
Bootstrap support for O84211 as seed ortholog is 100%.

Group of orthologs #3. Best score 806 bits
Score difference with first non-orthologous sequence - A.thaliana:193 C.trachomatis:806

Q9FI56              	100.00%		O84288              	100.00%
Q9SXJ7              	72.37%		
Bootstrap support for Q9FI56 as seed ortholog is 99%.
Bootstrap support for O84288 as seed ortholog is 100%.

Group of orthologs #4. Best score 792 bits
Score difference with first non-orthologous sequence - A.thaliana:242 C.trachomatis:792

Q9LF37              	100.00%		O84115              	100.00%
Q8VYJ7              	41.57%		
Bootstrap support for Q9LF37 as seed ortholog is 99%.
Bootstrap support for O84115 as seed ortholog is 100%.

Group of orthologs #5. Best score 748 bits
Score difference with first non-orthologous sequence - A.thaliana:182 C.trachomatis:748

Q9SI75              	100.00%		O84444              	100.00%
Bootstrap support for Q9SI75 as seed ortholog is 99%.
Bootstrap support for O84444 as seed ortholog is 100%.

Group of orthologs #6. Best score 747 bits
Score difference with first non-orthologous sequence - A.thaliana:63 C.trachomatis:695

Q9LDZ0              	100.00%		P17821              	100.00%
Q8GUM2              	56.84%		
Bootstrap support for Q9LDZ0 as seed ortholog is 93%.
Bootstrap support for P17821 as seed ortholog is 100%.

Group of orthologs #7. Best score 740 bits
Score difference with first non-orthologous sequence - A.thaliana:247 C.trachomatis:740

P93655              	100.00%		O84348              	100.00%
Q9M9L7              	58.17%		
Q9M9L8              	43.92%		
Bootstrap support for P93655 as seed ortholog is 99%.
Bootstrap support for O84348 as seed ortholog is 100%.

Group of orthologs #8. Best score 682 bits
Score difference with first non-orthologous sequence - A.thaliana:405 C.trachomatis:682

P50546              	100.00%		P0CE09              	100.00%
Bootstrap support for P50546 as seed ortholog is 100%.
Bootstrap support for P0CE09 as seed ortholog is 100%.

Group of orthologs #9. Best score 668 bits
Score difference with first non-orthologous sequence - A.thaliana:66 C.trachomatis:668

Q9FNM5              	100.00%		O84067              	100.00%
Bootstrap support for Q9FNM5 as seed ortholog is 94%.
Bootstrap support for O84067 as seed ortholog is 100%.

Group of orthologs #10. Best score 666 bits
Score difference with first non-orthologous sequence - A.thaliana:666 C.trachomatis:666

Q9SD76              	100.00%		O84250              	100.00%
Q9LIB2              	39.42%		
Bootstrap support for Q9SD76 as seed ortholog is 100%.
Bootstrap support for O84250 as seed ortholog is 100%.

Group of orthologs #11. Best score 647 bits
Score difference with first non-orthologous sequence - A.thaliana:154 C.trachomatis:647

Q8GZQ3              	100.00%		O84849              	100.00%
Bootstrap support for Q8GZQ3 as seed ortholog is 99%.
Bootstrap support for O84849 as seed ortholog is 100%.

Group of orthologs #12. Best score 638 bits
Score difference with first non-orthologous sequence - A.thaliana:448 C.trachomatis:638

F4KE63              	100.00%		O84304              	100.00%
Bootstrap support for F4KE63 as seed ortholog is 100%.
Bootstrap support for O84304 as seed ortholog is 100%.

Group of orthologs #13. Best score 594 bits
Score difference with first non-orthologous sequence - A.thaliana:594 C.trachomatis:594

Q9CAF6              	100.00%		O84192              	100.00%
Bootstrap support for Q9CAF6 as seed ortholog is 100%.
Bootstrap support for O84192 as seed ortholog is 100%.

Group of orthologs #14. Best score 591 bits
Score difference with first non-orthologous sequence - A.thaliana:591 C.trachomatis:352

Q9SS38              	100.00%		O84193              	100.00%
Q94BZ7              	77.39%		
Bootstrap support for Q9SS38 as seed ortholog is 100%.
Bootstrap support for O84193 as seed ortholog is 100%.

Group of orthologs #15. Best score 590 bits
Score difference with first non-orthologous sequence - A.thaliana:590 C.trachomatis:590

Q8L785              	100.00%		P0CE22              	100.00%
Bootstrap support for Q8L785 as seed ortholog is 100%.
Bootstrap support for P0CE22 as seed ortholog is 100%.

Group of orthologs #16. Best score 586 bits
Score difference with first non-orthologous sequence - A.thaliana:42 C.trachomatis:410

Q8L7B5              	100.00%		P0C0Z7              	100.00%
P29197              	72.85%		
Q93ZM7              	32.77%		
Bootstrap support for Q8L7B5 as seed ortholog is 88%.
Bootstrap support for P0C0Z7 as seed ortholog is 100%.

Group of orthologs #17. Best score 576 bits
Score difference with first non-orthologous sequence - A.thaliana:576 C.trachomatis:576

Q9FLH2              	100.00%		O84057              	100.00%
F4IWV2              	82.21%		
Bootstrap support for Q9FLH2 as seed ortholog is 100%.
Bootstrap support for O84057 as seed ortholog is 100%.

Group of orthologs #18. Best score 567 bits
Score difference with first non-orthologous sequence - A.thaliana:567 C.trachomatis:567

Q9ZS97              	100.00%		O84690              	100.00%
Q3E8H7              	27.11%		
Bootstrap support for Q9ZS97 as seed ortholog is 100%.
Bootstrap support for O84690 as seed ortholog is 100%.

Group of orthologs #19. Best score 540 bits
Score difference with first non-orthologous sequence - A.thaliana:540 C.trachomatis:540

F4IW47              	100.00%		O84755              	100.00%
Q8RWV0              	84.23%		
Bootstrap support for F4IW47 as seed ortholog is 100%.
Bootstrap support for O84755 as seed ortholog is 100%.

Group of orthologs #20. Best score 538 bits
Score difference with first non-orthologous sequence - A.thaliana:538 C.trachomatis:538

Q9SHS2              	100.00%		P0CD73              	100.00%
Bootstrap support for Q9SHS2 as seed ortholog is 100%.
Bootstrap support for P0CD73 as seed ortholog is 100%.

Group of orthologs #21. Best score 525 bits
Score difference with first non-orthologous sequence - A.thaliana:52 C.trachomatis:525

O04630              	100.00%		O84585              	100.00%
Q8GZ45              	15.38%		
Bootstrap support for O04630 as seed ortholog is 87%.
Bootstrap support for O84585 as seed ortholog is 100%.

Group of orthologs #22. Best score 522 bits
Score difference with first non-orthologous sequence - A.thaliana:522 C.trachomatis:232

P92935              	100.00%		O84068              	100.00%
Q39002              	82.66%		
Bootstrap support for P92935 as seed ortholog is 100%.
Bootstrap support for O84068 as seed ortholog is 100%.

Group of orthologs #23. Best score 514 bits
Score difference with first non-orthologous sequence - A.thaliana:18 C.trachomatis:514

P36428              	100.00%		O84754              	100.00%
Bootstrap support for P36428 as seed ortholog is 61%.
Alternative seed ortholog is Q9FFC7 (18 bits away from this cluster)
Bootstrap support for O84754 as seed ortholog is 100%.

Group of orthologs #24. Best score 508 bits
Score difference with first non-orthologous sequence - A.thaliana:357 C.trachomatis:508

P17745              	100.00%		P0CD71              	100.00%
Bootstrap support for P17745 as seed ortholog is 100%.
Bootstrap support for P0CD71 as seed ortholog is 100%.

Group of orthologs #25. Best score 494 bits
Score difference with first non-orthologous sequence - A.thaliana:238 C.trachomatis:494

Q9M0S5              	100.00%		O84046              	100.00%
O04196              	10.05%		
Bootstrap support for Q9M0S5 as seed ortholog is 99%.
Bootstrap support for O84046 as seed ortholog is 100%.

Group of orthologs #26. Best score 490 bits
Score difference with first non-orthologous sequence - A.thaliana:490 C.trachomatis:490

F4K0E8              	100.00%		O84060              	100.00%
Bootstrap support for F4K0E8 as seed ortholog is 100%.
Bootstrap support for O84060 as seed ortholog is 100%.

Group of orthologs #27. Best score 490 bits
Score difference with first non-orthologous sequence - A.thaliana:490 C.trachomatis:490

Q9SJ20              	100.00%		O84834              	100.00%
Bootstrap support for Q9SJ20 as seed ortholog is 100%.
Bootstrap support for O84834 as seed ortholog is 100%.

Group of orthologs #28. Best score 488 bits
Score difference with first non-orthologous sequence - A.thaliana:78 C.trachomatis:488

O04983              	100.00%		O84126              	100.00%
Bootstrap support for O04983 as seed ortholog is 98%.
Bootstrap support for O84126 as seed ortholog is 100%.

Group of orthologs #29. Best score 487 bits
Score difference with first non-orthologous sequence - A.thaliana:341 C.trachomatis:487

F4JJT9              	100.00%		O84546              	100.00%
Bootstrap support for F4JJT9 as seed ortholog is 100%.
Bootstrap support for O84546 as seed ortholog is 100%.

Group of orthologs #30. Best score 478 bits
Score difference with first non-orthologous sequence - A.thaliana:26 C.trachomatis:478

Q39102              	100.00%		O84848              	100.00%
Q9FH02              	75.49%		
O80860              	11.98%		
Q8W585              	11.32%		
Q1PDW5              	6.70%		
Bootstrap support for Q39102 as seed ortholog is 79%.
Bootstrap support for O84848 as seed ortholog is 100%.

Group of orthologs #31. Best score 475 bits
Score difference with first non-orthologous sequence - A.thaliana:177 C.trachomatis:475

P52410              	100.00%		O84775              	100.00%
Bootstrap support for P52410 as seed ortholog is 100%.
Bootstrap support for O84775 as seed ortholog is 100%.

Group of orthologs #32. Best score 465 bits
Score difference with first non-orthologous sequence - A.thaliana:465 C.trachomatis:465

P93033              	100.00%		O84863              	100.00%
Q9FI53              	84.42%		
Bootstrap support for P93033 as seed ortholog is 100%.
Bootstrap support for O84863 as seed ortholog is 100%.

Group of orthologs #33. Best score 463 bits
Score difference with first non-orthologous sequence - A.thaliana:463 C.trachomatis:463

Q9LXV3              	100.00%		O84207              	100.00%
Q9FMF7              	8.44%		
Bootstrap support for Q9LXV3 as seed ortholog is 100%.
Bootstrap support for O84207 as seed ortholog is 100%.

Group of orthologs #34. Best score 457 bits
Score difference with first non-orthologous sequence - A.thaliana:457 C.trachomatis:457

Q9LJL3              	100.00%		O84831              	100.00%
Q8VY06              	85.30%		
Bootstrap support for Q9LJL3 as seed ortholog is 100%.
Bootstrap support for O84831 as seed ortholog is 100%.

Group of orthologs #35. Best score 445 bits
Score difference with first non-orthologous sequence - A.thaliana:445 C.trachomatis:445

F4I6G9              	100.00%		Q59321              	100.00%
Q0WRY1              	61.93%		
Q9LTW8              	61.41%		
O64753              	60.10%		
Q8L6Z9              	46.94%		
Bootstrap support for F4I6G9 as seed ortholog is 100%.
Bootstrap support for Q59321 as seed ortholog is 100%.

Group of orthologs #36. Best score 424 bits
Score difference with first non-orthologous sequence - A.thaliana:424 C.trachomatis:424

Q9FFR3              	100.00%		O84066              	100.00%
Q9SH69              	90.62%		
Q9FWA3              	58.64%		
Bootstrap support for Q9FFR3 as seed ortholog is 100%.
Bootstrap support for O84066 as seed ortholog is 100%.

Group of orthologs #37. Best score 420 bits
Score difference with first non-orthologous sequence - A.thaliana:313 C.trachomatis:420

P25269              	100.00%		O84172              	100.00%
P14671              	82.77%		
F4K727              	21.59%		
Bootstrap support for P25269 as seed ortholog is 100%.
Bootstrap support for O84172 as seed ortholog is 100%.

Group of orthologs #38. Best score 420 bits
Score difference with first non-orthologous sequence - A.thaliana:52 C.trachomatis:420

Q9SHI1              	100.00%		O84098              	100.00%
Bootstrap support for Q9SHI1 as seed ortholog is 88%.
Bootstrap support for O84098 as seed ortholog is 100%.

Group of orthologs #39. Best score 413 bits
Score difference with first non-orthologous sequence - A.thaliana:413 C.trachomatis:413

P47924              	100.00%		O84736              	100.00%
Q6NLQ7              	29.71%		
F4KJA1              	23.28%		
Bootstrap support for P47924 as seed ortholog is 100%.
Bootstrap support for O84736 as seed ortholog is 100%.

Group of orthologs #40. Best score 410 bits
Score difference with first non-orthologous sequence - A.thaliana:410 C.trachomatis:410

O23247              	100.00%		O84460              	100.00%
Q9C713              	74.34%		
Bootstrap support for O23247 as seed ortholog is 100%.
Bootstrap support for O84460 as seed ortholog is 100%.

Group of orthologs #41. Best score 405 bits
Score difference with first non-orthologous sequence - A.thaliana:73 C.trachomatis:14

F4JGR5              	100.00%		O84210              	100.00%
Q8W4M5              	68.42%		
Bootstrap support for F4JGR5 as seed ortholog is 95%.
Bootstrap support for O84210 as seed ortholog is 63%.
Alternative seed ortholog is O84208 (14 bits away from this cluster)

Group of orthologs #42. Best score 389 bits
Score difference with first non-orthologous sequence - A.thaliana:262 C.trachomatis:389

F4JRX3              	100.00%		O84649              	100.00%
Bootstrap support for F4JRX3 as seed ortholog is 100%.
Bootstrap support for O84649 as seed ortholog is 100%.

Group of orthologs #43. Best score 389 bits
Score difference with first non-orthologous sequence - A.thaliana:105 C.trachomatis:389

Q9M3H5              	100.00%		O84732              	100.00%
Bootstrap support for Q9M3H5 as seed ortholog is 99%.
Bootstrap support for O84732 as seed ortholog is 100%.

Group of orthologs #44. Best score 381 bits
Score difference with first non-orthologous sequence - A.thaliana:322 C.trachomatis:381

Q9SLA8              	100.00%		O84106              	100.00%
Bootstrap support for Q9SLA8 as seed ortholog is 100%.
Bootstrap support for O84106 as seed ortholog is 100%.

Group of orthologs #45. Best score 371 bits
Score difference with first non-orthologous sequence - A.thaliana:217 C.trachomatis:371

Q9LI77              	100.00%		O84006              	100.00%
Bootstrap support for Q9LI77 as seed ortholog is 99%.
Bootstrap support for O84006 as seed ortholog is 100%.

Group of orthologs #46. Best score 370 bits
Score difference with first non-orthologous sequence - A.thaliana:70 C.trachomatis:370

Q9FX54              	100.00%		P0CE13              	100.00%
P25858              	96.71%		
Q9SAJ6              	41.12%		
Q5E924              	36.84%		
Bootstrap support for Q9FX54 as seed ortholog is 98%.
Bootstrap support for P0CE13 as seed ortholog is 100%.

Group of orthologs #47. Best score 369 bits
Score difference with first non-orthologous sequence - A.thaliana:369 C.trachomatis:369

F4JFJ3              	100.00%		O84753              	100.00%
Bootstrap support for F4JFJ3 as seed ortholog is 100%.
Bootstrap support for O84753 as seed ortholog is 100%.

Group of orthologs #48. Best score 368 bits
Score difference with first non-orthologous sequence - A.thaliana:368 C.trachomatis:368

Q38854              	100.00%		O84335              	100.00%
F4IXL8              	61.73%		
Q9LFL9              	33.11%		
Bootstrap support for Q38854 as seed ortholog is 100%.
Bootstrap support for O84335 as seed ortholog is 100%.

Group of orthologs #49. Best score 365 bits
Score difference with first non-orthologous sequence - A.thaliana:287 C.trachomatis:365

O23654              	100.00%		O84310              	100.00%
Bootstrap support for O23654 as seed ortholog is 100%.
Bootstrap support for O84310 as seed ortholog is 100%.

Group of orthologs #50. Best score 359 bits
Score difference with first non-orthologous sequence - A.thaliana:359 C.trachomatis:359

P25696              	100.00%		O84591              	100.00%
Q9C9C4              	41.03%		
Q9ZW34              	23.47%		
Bootstrap support for P25696 as seed ortholog is 100%.
Bootstrap support for O84591 as seed ortholog is 100%.

Group of orthologs #51. Best score 359 bits
Score difference with first non-orthologous sequence - A.thaliana:40 C.trachomatis:359

Q39242              	100.00%		O84101              	100.00%
Q39243              	100.00%		
Bootstrap support for Q39242 as seed ortholog is 89%.
Bootstrap support for Q39243 as seed ortholog is 89%.
Bootstrap support for O84101 as seed ortholog is 100%.

Group of orthologs #52. Best score 351 bits
Score difference with first non-orthologous sequence - A.thaliana:351 C.trachomatis:351

Q9FK07              	100.00%		O84711              	100.00%
Q66GN9              	34.14%		
F4K7F6              	23.82%		
Bootstrap support for Q9FK07 as seed ortholog is 100%.
Bootstrap support for O84711 as seed ortholog is 100%.

Group of orthologs #53. Best score 351 bits
Score difference with first non-orthologous sequence - A.thaliana:351 C.trachomatis:351

Q9LT68              	100.00%		O84865              	100.00%
Q9C6D3              	40.60%		
Bootstrap support for Q9LT68 as seed ortholog is 100%.
Bootstrap support for O84865 as seed ortholog is 100%.

Group of orthologs #54. Best score 348 bits
Score difference with first non-orthologous sequence - A.thaliana:348 C.trachomatis:348

Q9FV81              	100.00%		O84007              	100.00%
Bootstrap support for Q9FV81 as seed ortholog is 100%.
Bootstrap support for O84007 as seed ortholog is 100%.

Group of orthologs #55. Best score 347 bits
Score difference with first non-orthologous sequence - A.thaliana:112 C.trachomatis:347

F4I3J0              	100.00%		O84094              	100.00%
Bootstrap support for F4I3J0 as seed ortholog is 99%.
Bootstrap support for O84094 as seed ortholog is 100%.

Group of orthologs #56. Best score 344 bits
Score difference with first non-orthologous sequence - A.thaliana:344 C.trachomatis:344

Q8LAD2              	100.00%		O84829              	100.00%
P68209              	80.36%		
Bootstrap support for Q8LAD2 as seed ortholog is 100%.
Bootstrap support for O84829 as seed ortholog is 100%.

Group of orthologs #57. Best score 341 bits
Score difference with first non-orthologous sequence - A.thaliana:341 C.trachomatis:341

Q9SAJ4              	100.00%		P0CD78              	100.00%
P50318              	75.35%		
Q9LD57              	74.88%		
Bootstrap support for Q9SAJ4 as seed ortholog is 100%.
Bootstrap support for P0CD78 as seed ortholog is 100%.

Group of orthologs #58. Best score 339 bits
Score difference with first non-orthologous sequence - A.thaliana:2 C.trachomatis:339

Q39199              	100.00%		P0CD80              	100.00%
Bootstrap support for Q39199 as seed ortholog is 52%.
Alternative seed ortholog is Q9ZUP2 (2 bits away from this cluster)
Bootstrap support for P0CD80 as seed ortholog is 100%.

Group of orthologs #59. Best score 336 bits
Score difference with first non-orthologous sequence - A.thaliana:92 C.trachomatis:336

Q9M5K3              	100.00%		O84561              	100.00%
Q9M5K2              	91.48%		
Bootstrap support for Q9M5K3 as seed ortholog is 99%.
Bootstrap support for O84561 as seed ortholog is 100%.

Group of orthologs #60. Best score 333 bits
Score difference with first non-orthologous sequence - A.thaliana:250 C.trachomatis:333

Q9LJE2              	100.00%		O84786              	100.00%
Bootstrap support for Q9LJE2 as seed ortholog is 100%.
Bootstrap support for O84786 as seed ortholog is 100%.

Group of orthologs #61. Best score 324 bits
Score difference with first non-orthologous sequence - A.thaliana:324 C.trachomatis:324

Q9LIP9              	100.00%		O84823              	100.00%
Bootstrap support for Q9LIP9 as seed ortholog is 100%.
Bootstrap support for O84823 as seed ortholog is 100%.

Group of orthologs #62. Best score 323 bits
Score difference with first non-orthologous sequence - A.thaliana:34 C.trachomatis:323

Q38799              	100.00%		O84248              	100.00%
Bootstrap support for Q38799 as seed ortholog is 87%.
Bootstrap support for O84248 as seed ortholog is 100%.

Group of orthologs #63. Best score 322 bits
Score difference with first non-orthologous sequence - A.thaliana:322 C.trachomatis:322

Q38954              	100.00%		O84698              	100.00%
Bootstrap support for Q38954 as seed ortholog is 100%.
Bootstrap support for O84698 as seed ortholog is 100%.

Group of orthologs #64. Best score 314 bits
Score difference with first non-orthologous sequence - A.thaliana:314 C.trachomatis:314

Q0WVW9              	100.00%		O84300              	100.00%
Bootstrap support for Q0WVW9 as seed ortholog is 100%.
Bootstrap support for O84300 as seed ortholog is 100%.

Group of orthologs #65. Best score 307 bits
Score difference with first non-orthologous sequence - A.thaliana:307 C.trachomatis:307

F4IPY2              	100.00%		O84787              	100.00%
B3LFA4              	28.85%		
Q9LYL3              	22.84%		
Bootstrap support for F4IPY2 as seed ortholog is 100%.
Bootstrap support for O84787 as seed ortholog is 100%.

Group of orthologs #66. Best score 305 bits
Score difference with first non-orthologous sequence - A.thaliana:25 C.trachomatis:305

Q9FNN1              	100.00%		P0CE21              	100.00%
Q9FFP6              	91.72%		
Q9FM97              	69.62%		
O65595              	66.28%		
Q9SQQ7              	55.81%		
Q9M057              	53.05%		
Q9LU95              	52.62%		
Q9M044              	45.78%		
Q9SJQ0              	10.76%		
Q94KE3              	10.47%		
Bootstrap support for Q9FNN1 as seed ortholog is 75%.
Bootstrap support for P0CE21 as seed ortholog is 100%.

Group of orthologs #67. Best score 305 bits
Score difference with first non-orthologous sequence - A.thaliana:121 C.trachomatis:305

Q9SVN5              	100.00%		O84035              	100.00%
Bootstrap support for Q9SVN5 as seed ortholog is 99%.
Bootstrap support for O84035 as seed ortholog is 100%.

Group of orthologs #68. Best score 301 bits
Score difference with first non-orthologous sequence - A.thaliana:198 C.trachomatis:301

Q93ZN9              	100.00%		O84395              	100.00%
Q9ZQI7              	38.39%		
Bootstrap support for Q93ZN9 as seed ortholog is 100%.
Bootstrap support for O84395 as seed ortholog is 100%.

Group of orthologs #69. Best score 300 bits
Score difference with first non-orthologous sequence - A.thaliana:300 C.trachomatis:300

Q9M876              	100.00%		O84065              	100.00%
Bootstrap support for Q9M876 as seed ortholog is 100%.
Bootstrap support for O84065 as seed ortholog is 100%.

Group of orthologs #70. Best score 299 bits
Score difference with first non-orthologous sequence - A.thaliana:299 C.trachomatis:299

Q9FY99              	100.00%		O84188              	100.00%
Q8L743              	78.47%		
Q43727              	60.32%		
Q93ZW0              	27.17%		
Q9LK23              	19.73%		
Q9FJI5              	19.17%		
Bootstrap support for Q9FY99 as seed ortholog is 100%.
Bootstrap support for O84188 as seed ortholog is 100%.

Group of orthologs #71. Best score 298 bits
Score difference with first non-orthologous sequence - A.thaliana:298 C.trachomatis:298

F4JI63              	100.00%		O84360              	100.00%
Bootstrap support for F4JI63 as seed ortholog is 100%.
Bootstrap support for O84360 as seed ortholog is 100%.

Group of orthologs #72. Best score 294 bits
Score difference with first non-orthologous sequence - A.thaliana:294 C.trachomatis:294

Q9FJM0              	100.00%		O84383              	100.00%
Bootstrap support for Q9FJM0 as seed ortholog is 100%.
Bootstrap support for O84383 as seed ortholog is 100%.

Group of orthologs #73. Best score 292 bits
Score difference with first non-orthologous sequence - A.thaliana:59 C.trachomatis:292

Q8H1E2              	100.00%		O84381              	100.00%
Bootstrap support for Q8H1E2 as seed ortholog is 96%.
Bootstrap support for O84381 as seed ortholog is 100%.

Group of orthologs #74. Best score 291 bits
Score difference with first non-orthologous sequence - A.thaliana:166 C.trachomatis:106

Q8H107              	100.00%		O84058              	100.00%
Q9FLQ4              	70.66%		
Bootstrap support for Q8H107 as seed ortholog is 99%.
Bootstrap support for O84058 as seed ortholog is 99%.

Group of orthologs #75. Best score 290 bits
Score difference with first non-orthologous sequence - A.thaliana:88 C.trachomatis:290

P37107              	100.00%		O84028              	100.00%
Bootstrap support for P37107 as seed ortholog is 98%.
Bootstrap support for O84028 as seed ortholog is 100%.

Group of orthologs #76. Best score 287 bits
Score difference with first non-orthologous sequence - A.thaliana:13 C.trachomatis:287

A2RVR7              	100.00%		O84026              	100.00%
Bootstrap support for A2RVR7 as seed ortholog is 65%.
Alternative seed ortholog is Q8RX79 (13 bits away from this cluster)
Bootstrap support for O84026 as seed ortholog is 100%.

Group of orthologs #77. Best score 287 bits
Score difference with first non-orthologous sequence - A.thaliana:158 C.trachomatis:287

Q8RXD9              	100.00%		O84089              	100.00%
Bootstrap support for Q8RXD9 as seed ortholog is 99%.
Bootstrap support for O84089 as seed ortholog is 100%.

Group of orthologs #78. Best score 284 bits
Score difference with first non-orthologous sequence - A.thaliana:18 C.trachomatis:284

F4I532              	100.00%		O84465              	100.00%
Bootstrap support for F4I532 as seed ortholog is 71%.
Alternative seed ortholog is Q9LVY0 (18 bits away from this cluster)
Bootstrap support for O84465 as seed ortholog is 100%.

Group of orthologs #79. Best score 284 bits
Score difference with first non-orthologous sequence - A.thaliana:284 C.trachomatis:284

Q9FEA2              	100.00%		O84451              	100.00%
Bootstrap support for Q9FEA2 as seed ortholog is 100%.
Bootstrap support for O84451 as seed ortholog is 100%.

Group of orthologs #80. Best score 282 bits
Score difference with first non-orthologous sequence - A.thaliana:282 C.trachomatis:282

Q9XFS9              	100.00%		O84074              	100.00%
Bootstrap support for Q9XFS9 as seed ortholog is 100%.
Bootstrap support for O84074 as seed ortholog is 100%.

Group of orthologs #81. Best score 280 bits
Score difference with first non-orthologous sequence - A.thaliana:151 C.trachomatis:280

Q42522              	100.00%		O84212              	100.00%
P42799              	87.96%		
Bootstrap support for Q42522 as seed ortholog is 99%.
Bootstrap support for O84212 as seed ortholog is 100%.

Group of orthologs #82. Best score 279 bits
Score difference with first non-orthologous sequence - A.thaliana:63 C.trachomatis:279

Q940V1              	100.00%		O84345              	100.00%
Q9SJZ7              	76.42%		
Q0WN54              	18.54%		
Q058J9              	11.54%		
Bootstrap support for Q940V1 as seed ortholog is 96%.
Bootstrap support for O84345 as seed ortholog is 100%.

Group of orthologs #83. Best score 278 bits
Score difference with first non-orthologous sequence - A.thaliana:229 C.trachomatis:278

P55228              	100.00%		O84496              	100.00%
P55229              	31.33%		
P55230              	30.39%		
Q9SIK1              	25.57%		
P55231              	24.63%		
Bootstrap support for P55228 as seed ortholog is 99%.
Bootstrap support for O84496 as seed ortholog is 100%.

Group of orthologs #84. Best score 277 bits
Score difference with first non-orthologous sequence - A.thaliana:277 C.trachomatis:277

Q93WX6              	100.00%		O84693              	100.00%
Bootstrap support for Q93WX6 as seed ortholog is 100%.
Bootstrap support for O84693 as seed ortholog is 100%.

Group of orthologs #85. Best score 272 bits
Score difference with first non-orthologous sequence - A.thaliana:121 C.trachomatis:272

P34795              	100.00%		P0CD72              	100.00%
Bootstrap support for P34795 as seed ortholog is 99%.
Bootstrap support for P0CD72 as seed ortholog is 100%.

Group of orthologs #86. Best score 271 bits
Score difference with first non-orthologous sequence - A.thaliana:271 C.trachomatis:271

Q9SFH9              	100.00%		O84638              	100.00%
Q94LA4              	43.42%		
Bootstrap support for Q9SFH9 as seed ortholog is 100%.
Bootstrap support for O84638 as seed ortholog is 100%.

Group of orthologs #87. Best score 270 bits
Score difference with first non-orthologous sequence - A.thaliana:199 C.trachomatis:270

O82662              	100.00%		O84828              	100.00%
Bootstrap support for O82662 as seed ortholog is 100%.
Bootstrap support for O84828 as seed ortholog is 100%.

Group of orthologs #88. Best score 267 bits
Score difference with first non-orthologous sequence - A.thaliana:18 C.trachomatis:267

Q9LV93              	100.00%		O84352              	100.00%
Q9FIB4              	75.76%		
Bootstrap support for Q9LV93 as seed ortholog is 30%.
Alternative seed ortholog is Q8H0V6 (18 bits away from this cluster)
Bootstrap support for O84352 as seed ortholog is 100%.

Group of orthologs #89. Best score 260 bits
Score difference with first non-orthologous sequence - A.thaliana:35 C.trachomatis:260

O24617              	100.00%		O84797              	100.00%
Q9SMV7              	100.00%		
O04716              	10.93%		
Bootstrap support for O24617 as seed ortholog is 70%.
Alternative seed ortholog is O65607 (35 bits away from this cluster)
Bootstrap support for Q9SMV7 as seed ortholog is 68%.
Alternative seed ortholog is O65607 (35 bits away from this cluster)
Bootstrap support for O84797 as seed ortholog is 100%.

Group of orthologs #90. Best score 260 bits
Score difference with first non-orthologous sequence - A.thaliana:61 C.trachomatis:95

Q5M729              	100.00%		O84249              	100.00%
Q8RWN9              	73.24%		
Q0WQF7              	8.26%		
Bootstrap support for Q5M729 as seed ortholog is 93%.
Bootstrap support for O84249 as seed ortholog is 98%.

Group of orthologs #91. Best score 260 bits
Score difference with first non-orthologous sequence - A.thaliana:35 C.trachomatis:260

Q8RWT8              	100.00%		O84734              	100.00%
Bootstrap support for Q8RWT8 as seed ortholog is 80%.
Bootstrap support for O84734 as seed ortholog is 100%.

Group of orthologs #92. Best score 258 bits
Score difference with first non-orthologous sequence - A.thaliana:258 C.trachomatis:258

Q66GQ1              	100.00%		O84704              	100.00%
Bootstrap support for Q66GQ1 as seed ortholog is 100%.
Bootstrap support for O84704 as seed ortholog is 100%.

Group of orthologs #93. Best score 258 bits
Score difference with first non-orthologous sequence - A.thaliana:55 C.trachomatis:258

Q9SAV3              	100.00%		O84344              	100.00%
Bootstrap support for Q9SAV3 as seed ortholog is 94%.
Bootstrap support for O84344 as seed ortholog is 100%.

Group of orthologs #94. Best score 253 bits
Score difference with first non-orthologous sequence - A.thaliana:253 C.trachomatis:253

P30184              	100.00%		O84049              	100.00%
Q944P7              	84.34%		
Q8RX72              	77.89%		
Bootstrap support for P30184 as seed ortholog is 100%.
Bootstrap support for O84049 as seed ortholog is 100%.

Group of orthologs #95. Best score 253 bits
Score difference with first non-orthologous sequence - A.thaliana:253 C.trachomatis:253

F4I3P9              	100.00%		O84271              	100.00%
Bootstrap support for F4I3P9 as seed ortholog is 100%.
Bootstrap support for O84271 as seed ortholog is 100%.

Group of orthologs #96. Best score 253 bits
Score difference with first non-orthologous sequence - A.thaliana:253 C.trachomatis:253

P57720              	100.00%		O84373              	100.00%
Bootstrap support for P57720 as seed ortholog is 100%.
Bootstrap support for O84373 as seed ortholog is 100%.

Group of orthologs #97. Best score 252 bits
Score difference with first non-orthologous sequence - A.thaliana:252 C.trachomatis:252

Q94JQ3              	100.00%		O84439              	100.00%
Q9SZJ5              	40.00%		
Q94C74              	39.00%		
O23254              	36.00%		
Q9SVM4              	33.75%		
Q9LM59              	27.62%		
Q84WV0              	27.25%		
Bootstrap support for Q94JQ3 as seed ortholog is 100%.
Bootstrap support for O84439 as seed ortholog is 100%.

Group of orthologs #98. Best score 247 bits
Score difference with first non-orthologous sequence - A.thaliana:182 C.trachomatis:247

Q9SZN1              	100.00%		O84309              	100.00%
P11574              	93.85%		
Q8W4E2              	93.58%		
Bootstrap support for Q9SZN1 as seed ortholog is 99%.
Bootstrap support for O84309 as seed ortholog is 100%.

Group of orthologs #99. Best score 243 bits
Score difference with first non-orthologous sequence - A.thaliana:195 C.trachomatis:243

Q9LM13              	100.00%		O84727              	100.00%
F4I8M8              	56.32%		
Bootstrap support for Q9LM13 as seed ortholog is 100%.
Bootstrap support for O84727 as seed ortholog is 100%.

Group of orthologs #100. Best score 243 bits
Score difference with first non-orthologous sequence - A.thaliana:243 C.trachomatis:243

Q8LEE8              	100.00%		O84562              	100.00%
Bootstrap support for Q8LEE8 as seed ortholog is 100%.
Bootstrap support for O84562 as seed ortholog is 100%.

Group of orthologs #101. Best score 237 bits
Score difference with first non-orthologous sequence - A.thaliana:237 C.trachomatis:237

F4JSH5              	100.00%		O84614              	100.00%
Bootstrap support for F4JSH5 as seed ortholog is 100%.
Bootstrap support for O84614 as seed ortholog is 100%.

Group of orthologs #102. Best score 236 bits
Score difference with first non-orthologous sequence - A.thaliana:236 C.trachomatis:236

P46645              	100.00%		O84642              	100.00%
P46644              	78.46%		
P46646              	70.75%		
P46248              	35.55%		
P46643              	30.30%		
Bootstrap support for P46645 as seed ortholog is 100%.
Bootstrap support for O84642 as seed ortholog is 100%.

Group of orthologs #103. Best score 232 bits
Score difference with first non-orthologous sequence - A.thaliana:232 C.trachomatis:232

Q9ZPX5              	100.00%		O84596              	100.00%
O82663              	86.15%		
Bootstrap support for Q9ZPX5 as seed ortholog is 100%.
Bootstrap support for O84596 as seed ortholog is 100%.

Group of orthologs #104. Best score 231 bits
Score difference with first non-orthologous sequence - A.thaliana:95 C.trachomatis:231

P56791              	100.00%		O84530              	100.00%
Bootstrap support for P56791 as seed ortholog is 99%.
Bootstrap support for O84530 as seed ortholog is 100%.

Group of orthologs #105. Best score 229 bits
Score difference with first non-orthologous sequence - A.thaliana:229 C.trachomatis:229

P56765              	100.00%		O84295              	100.00%
Bootstrap support for P56765 as seed ortholog is 100%.
Bootstrap support for O84295 as seed ortholog is 100%.

Group of orthologs #106. Best score 228 bits
Score difference with first non-orthologous sequence - A.thaliana:228 C.trachomatis:228

O65271              	100.00%		O84081              	100.00%
Q9LHH7              	100.00%		
O65269              	56.93%		
A2RVV7              	37.40%		
Bootstrap support for O65271 as seed ortholog is 100%.
Bootstrap support for Q9LHH7 as seed ortholog is 100%.
Bootstrap support for O84081 as seed ortholog is 100%.

Group of orthologs #107. Best score 227 bits
Score difference with first non-orthologous sequence - A.thaliana:63 C.trachomatis:227

Q38885              	100.00%		P28539              	100.00%
Bootstrap support for Q38885 as seed ortholog is 92%.
Bootstrap support for P28539 as seed ortholog is 100%.

Group of orthologs #108. Best score 225 bits
Score difference with first non-orthologous sequence - A.thaliana:93 C.trachomatis:225

O81235              	100.00%		O84296              	100.00%
Q9LYK8              	41.94%		
Bootstrap support for O81235 as seed ortholog is 99%.
Bootstrap support for O84296 as seed ortholog is 100%.

Group of orthologs #109. Best score 218 bits
Score difference with first non-orthologous sequence - A.thaliana:12 C.trachomatis:218

Q8RY46              	100.00%		O84266              	100.00%
Q0WML0              	10.80%		
Bootstrap support for Q8RY46 as seed ortholog is 59%.
Alternative seed ortholog is Q9LVM1 (12 bits away from this cluster)
Bootstrap support for O84266 as seed ortholog is 100%.

Group of orthologs #110. Best score 218 bits
Score difference with first non-orthologous sequence - A.thaliana:218 C.trachomatis:218

F4HSD4              	100.00%		O84423              	100.00%
Bootstrap support for F4HSD4 as seed ortholog is 100%.
Bootstrap support for O84423 as seed ortholog is 100%.

Group of orthologs #111. Best score 218 bits
Score difference with first non-orthologous sequence - A.thaliana:146 C.trachomatis:218

P49243              	100.00%		O84242              	100.00%
Bootstrap support for P49243 as seed ortholog is 100%.
Bootstrap support for O84242 as seed ortholog is 100%.

Group of orthologs #112. Best score 218 bits
Score difference with first non-orthologous sequence - A.thaliana:218 C.trachomatis:218

Q9LIH6              	100.00%		O84613              	100.00%
Bootstrap support for Q9LIH6 as seed ortholog is 100%.
Bootstrap support for O84613 as seed ortholog is 100%.

Group of orthologs #113. Best score 215 bits
Score difference with first non-orthologous sequence - A.thaliana:89 C.trachomatis:215

F4I933              	100.00%		O84632              	100.00%
Bootstrap support for F4I933 as seed ortholog is 98%.
Bootstrap support for O84632 as seed ortholog is 100%.

Group of orthologs #114. Best score 215 bits
Score difference with first non-orthologous sequence - A.thaliana:215 C.trachomatis:215

Q9M1T1              	100.00%		O84404              	100.00%
Bootstrap support for Q9M1T1 as seed ortholog is 100%.
Bootstrap support for O84404 as seed ortholog is 100%.

Group of orthologs #115. Best score 213 bits
Score difference with first non-orthologous sequence - A.thaliana:213 C.trachomatis:213

O22941              	100.00%		O84812              	100.00%
B6EUA3              	72.35%		
F4HNU6              	17.97%		
Q9SCM6              	5.75%		
Bootstrap support for O22941 as seed ortholog is 100%.
Bootstrap support for O84812 as seed ortholog is 100%.

Group of orthologs #116. Best score 211 bits
Score difference with first non-orthologous sequence - A.thaliana:211 C.trachomatis:211

Q43307              	100.00%		O84813              	100.00%
Bootstrap support for Q43307 as seed ortholog is 100%.
Bootstrap support for O84813 as seed ortholog is 100%.

Group of orthologs #117. Best score 210 bits
Score difference with first non-orthologous sequence - A.thaliana:210 C.trachomatis:134

Q9AV97              	100.00%		P0CD74              	100.00%
Q6NQL4              	90.22%		
Bootstrap support for Q9AV97 as seed ortholog is 100%.
Bootstrap support for P0CD74 as seed ortholog is 99%.

Group of orthologs #118. Best score 207 bits
Score difference with first non-orthologous sequence - A.thaliana:207 C.trachomatis:207

B5X565              	100.00%		O84709              	100.00%
Bootstrap support for B5X565 as seed ortholog is 100%.
Bootstrap support for O84709 as seed ortholog is 100%.

Group of orthologs #119. Best score 207 bits
Score difference with first non-orthologous sequence - A.thaliana:55 C.trachomatis:207

Q9LY66              	100.00%		O84320              	100.00%
Bootstrap support for Q9LY66 as seed ortholog is 98%.
Bootstrap support for O84320 as seed ortholog is 100%.

Group of orthologs #120. Best score 201 bits
Score difference with first non-orthologous sequence - A.thaliana:60 C.trachomatis:201

P33207              	100.00%		P38004              	100.00%
Bootstrap support for P33207 as seed ortholog is 98%.
Bootstrap support for P38004 as seed ortholog is 100%.

Group of orthologs #121. Best score 200 bits
Score difference with first non-orthologous sequence - A.thaliana:200 C.trachomatis:200

F4I824              	100.00%		O84289              	100.00%
Bootstrap support for F4I824 as seed ortholog is 100%.
Bootstrap support for O84289 as seed ortholog is 100%.

Group of orthologs #122. Best score 199 bits
Score difference with first non-orthologous sequence - A.thaliana:199 C.trachomatis:199

Q9FV52              	100.00%		O84859              	100.00%
Q9SLN5              	100.00%		
Q9FV51              	46.56%		
Q9FV50              	33.70%		
Bootstrap support for Q9FV52 as seed ortholog is 100%.
Bootstrap support for Q9SLN5 as seed ortholog is 100%.
Bootstrap support for O84859 as seed ortholog is 100%.

Group of orthologs #123. Best score 199 bits
Score difference with first non-orthologous sequence - A.thaliana:3 C.trachomatis:64

Q9S834              	100.00%		O84712              	100.00%
Bootstrap support for Q9S834 as seed ortholog is 54%.
Alternative seed ortholog is Q9FN42 (3 bits away from this cluster)
Bootstrap support for O84712 as seed ortholog is 99%.

Group of orthologs #124. Best score 198 bits
Score difference with first non-orthologous sequence - A.thaliana:198 C.trachomatis:198

Q9C920              	100.00%		P0CD75              	100.00%
Bootstrap support for Q9C920 as seed ortholog is 100%.
Bootstrap support for P0CD75 as seed ortholog is 100%.

Group of orthologs #125. Best score 196 bits
Score difference with first non-orthologous sequence - A.thaliana:136 C.trachomatis:151

Q9CAF5              	100.00%		O84691              	100.00%
Bootstrap support for Q9CAF5 as seed ortholog is 99%.
Bootstrap support for O84691 as seed ortholog is 100%.

Group of orthologs #126. Best score 193 bits
Score difference with first non-orthologous sequence - A.thaliana:56 C.trachomatis:193

Q56Y11              	100.00%		O84456              	100.00%
Q8RX73              	100.00%		
O80458              	68.70%		
Q8GY03              	59.17%		
F4IMI8              	44.74%		
Q570Q8              	38.88%		
Bootstrap support for Q56Y11 as seed ortholog is 96%.
Bootstrap support for Q8RX73 as seed ortholog is 95%.
Bootstrap support for O84456 as seed ortholog is 100%.

Group of orthologs #127. Best score 191 bits
Score difference with first non-orthologous sequence - A.thaliana:68 C.trachomatis:191

O24457              	100.00%		O84247              	100.00%
P52901              	8.08%		
Q8H1Y0              	6.29%		
Bootstrap support for O24457 as seed ortholog is 97%.
Bootstrap support for O84247 as seed ortholog is 100%.

Group of orthologs #128. Best score 191 bits
Score difference with first non-orthologous sequence - A.thaliana:82 C.trachomatis:191

Q5PP33              	100.00%		O84824              	100.00%
                    	       		O84825              	50.81%
Bootstrap support for Q5PP33 as seed ortholog is 97%.
Bootstrap support for O84824 as seed ortholog is 100%.

Group of orthologs #129. Best score 190 bits
Score difference with first non-orthologous sequence - A.thaliana:190 C.trachomatis:190

Q1ENB6              	100.00%		O84619              	100.00%
F4JPH1              	74.00%		
Bootstrap support for Q1ENB6 as seed ortholog is 100%.
Bootstrap support for O84619 as seed ortholog is 100%.

Group of orthologs #130. Best score 187 bits
Score difference with first non-orthologous sequence - A.thaliana:187 C.trachomatis:187

P48491              	100.00%		O84332              	100.00%
Q9SKP6              	100.00%		
Bootstrap support for P48491 as seed ortholog is 100%.
Bootstrap support for Q9SKP6 as seed ortholog is 100%.
Bootstrap support for O84332 as seed ortholog is 100%.

Group of orthologs #131. Best score 185 bits
Score difference with first non-orthologous sequence - A.thaliana:107 C.trachomatis:185

Q9C5R8              	100.00%		O84608              	100.00%
Q96291              	74.79%		
Bootstrap support for Q9C5R8 as seed ortholog is 99%.
Bootstrap support for O84608 as seed ortholog is 100%.

Group of orthologs #132. Best score 183 bits
Score difference with first non-orthologous sequence - A.thaliana:28 C.trachomatis:183

O22609              	100.00%		P18584              	100.00%
Q9LU10              	17.51%		
Bootstrap support for O22609 as seed ortholog is 80%.
Bootstrap support for P18584 as seed ortholog is 100%.

Group of orthologs #133. Best score 179 bits
Score difference with first non-orthologous sequence - A.thaliana:88 C.trachomatis:100

Q3ECD0              	100.00%		O84665              	100.00%
Bootstrap support for Q3ECD0 as seed ortholog is 98%.
Bootstrap support for O84665 as seed ortholog is 98%.

Group of orthologs #134. Best score 178 bits
Score difference with first non-orthologous sequence - A.thaliana:54 C.trachomatis:178

O80842              	100.00%		O84827              	100.00%
Bootstrap support for O80842 as seed ortholog is 95%.
Bootstrap support for O84827 as seed ortholog is 100%.

Group of orthologs #135. Best score 175 bits
Score difference with first non-orthologous sequence - A.thaliana:42 C.trachomatis:175

P83483              	100.00%		O84676              	100.00%
P83484              	100.00%		O84722              	10.91%
Q9C5A9              	100.00%		
P19366              	50.11%		
Bootstrap support for P83483 as seed ortholog is 84%.
Bootstrap support for P83484 as seed ortholog is 85%.
Bootstrap support for Q9C5A9 as seed ortholog is 86%.
Bootstrap support for O84676 as seed ortholog is 100%.

Group of orthologs #136. Best score 175 bits
Score difference with first non-orthologous sequence - A.thaliana:175 C.trachomatis:175

F4JRF4              	100.00%		O84109              	100.00%
Bootstrap support for F4JRF4 as seed ortholog is 100%.
Bootstrap support for O84109 as seed ortholog is 100%.

Group of orthologs #137. Best score 175 bits
Score difference with first non-orthologous sequence - A.thaliana:175 C.trachomatis:175

Q9LU28              	100.00%		P55137              	100.00%
Bootstrap support for Q9LU28 as seed ortholog is 100%.
Bootstrap support for P55137 as seed ortholog is 100%.

Group of orthologs #138. Best score 173 bits
Score difference with first non-orthologous sequence - A.thaliana:173 C.trachomatis:85

Q9FMJ4              	100.00%		O84055              	100.00%
Bootstrap support for Q9FMJ4 as seed ortholog is 100%.
Bootstrap support for O84055 as seed ortholog is 98%.

Group of orthologs #139. Best score 170 bits
Score difference with first non-orthologous sequence - A.thaliana:9 C.trachomatis:170

P62126              	100.00%		P66370              	100.00%
Bootstrap support for P62126 as seed ortholog is 67%.
Alternative seed ortholog is P92532 (9 bits away from this cluster)
Bootstrap support for P66370 as seed ortholog is 100%.

Group of orthologs #140. Best score 170 bits
Score difference with first non-orthologous sequence - A.thaliana:170 C.trachomatis:170

Q9MBG4              	100.00%		O84507              	100.00%
Bootstrap support for Q9MBG4 as seed ortholog is 100%.
Bootstrap support for O84507 as seed ortholog is 100%.

Group of orthologs #141. Best score 168 bits
Score difference with first non-orthologous sequence - A.thaliana:168 C.trachomatis:168

Q8L960              	100.00%		O84728              	100.00%
Bootstrap support for Q8L960 as seed ortholog is 100%.
Bootstrap support for O84728 as seed ortholog is 100%.

Group of orthologs #142. Best score 168 bits
Score difference with first non-orthologous sequence - A.thaliana:47 C.trachomatis:168

Q9C5J6              	100.00%		O84771              	100.00%
Bootstrap support for Q9C5J6 as seed ortholog is 89%.
Bootstrap support for O84771 as seed ortholog is 100%.

Group of orthologs #143. Best score 166 bits
Score difference with first non-orthologous sequence - A.thaliana:166 C.trachomatis:166

Q8GYH8              	100.00%		O84864              	100.00%
Q9FY46              	77.47%		
Q9SAY1              	22.01%		
Q9MAX3              	21.32%		
Q9FEP7              	20.98%		
Q9SV13              	19.78%		
O04289              	19.09%		
Q9SXS2              	17.63%		
Q9LW86              	17.37%		
Q94LW6              	16.42%		
P92946              	15.82%		
O04722              	15.65%		
Bootstrap support for Q8GYH8 as seed ortholog is 100%.
Bootstrap support for O84864 as seed ortholog is 100%.

Group of orthologs #144. Best score 166 bits
Score difference with first non-orthologous sequence - A.thaliana:166 C.trachomatis:166

Q9LEU9              	100.00%		O84274              	100.00%
Bootstrap support for Q9LEU9 as seed ortholog is 100%.
Bootstrap support for O84274 as seed ortholog is 100%.

Group of orthologs #145. Best score 165 bits
Score difference with first non-orthologous sequence - A.thaliana:165 C.trachomatis:165

Q9MAC8              	100.00%		O84804              	100.00%
Q9FNF2              	23.27%		
Q9MAQ0              	12.78%		
Bootstrap support for Q9MAC8 as seed ortholog is 100%.
Bootstrap support for O84804 as seed ortholog is 100%.

Group of orthologs #146. Best score 163 bits
Score difference with first non-orthologous sequence - A.thaliana:71 C.trachomatis:163

A1A6J3              	100.00%		O84469              	100.00%
Bootstrap support for A1A6J3 as seed ortholog is 96%.
Bootstrap support for O84469 as seed ortholog is 100%.

Group of orthologs #147. Best score 163 bits
Score difference with first non-orthologous sequence - A.thaliana:75 C.trachomatis:163

O23049              	100.00%		P0CE01              	100.00%
Bootstrap support for O23049 as seed ortholog is 99%.
Bootstrap support for P0CE01 as seed ortholog is 100%.

Group of orthologs #148. Best score 162 bits
Score difference with first non-orthologous sequence - A.thaliana:108 C.trachomatis:162

F4ISP4              	100.00%		O84589              	100.00%
Bootstrap support for F4ISP4 as seed ortholog is 99%.
Bootstrap support for O84589 as seed ortholog is 100%.

Group of orthologs #149. Best score 161 bits
Score difference with first non-orthologous sequence - A.thaliana:76 C.trachomatis:161

O64765              	100.00%		O84720              	100.00%
Q940S3              	85.06%		
Bootstrap support for O64765 as seed ortholog is 96%.
Bootstrap support for O84720 as seed ortholog is 100%.

Group of orthologs #150. Best score 161 bits
Score difference with first non-orthologous sequence - A.thaliana:161 C.trachomatis:161

O49543              	100.00%		O84260              	100.00%
Bootstrap support for O49543 as seed ortholog is 100%.
Bootstrap support for O84260 as seed ortholog is 100%.

Group of orthologs #151. Best score 161 bits
Score difference with first non-orthologous sequence - A.thaliana:161 C.trachomatis:161

Q8RU07              	100.00%		O84241              	100.00%
Bootstrap support for Q8RU07 as seed ortholog is 100%.
Bootstrap support for O84241 as seed ortholog is 100%.

Group of orthologs #152. Best score 161 bits
Score difference with first non-orthologous sequence - A.thaliana:161 C.trachomatis:161

Q8VYV7              	100.00%		O84374              	100.00%
Bootstrap support for Q8VYV7 as seed ortholog is 100%.
Bootstrap support for O84374 as seed ortholog is 100%.

Group of orthologs #153. Best score 158 bits
Score difference with first non-orthologous sequence - A.thaliana:158 C.trachomatis:82

Q9ZSL6              	100.00%		P18333              	100.00%
O22056              	5.60%		
Bootstrap support for Q9ZSL6 as seed ortholog is 100%.
Bootstrap support for P18333 as seed ortholog is 99%.

Group of orthologs #154. Best score 158 bits
Score difference with first non-orthologous sequence - A.thaliana:158 C.trachomatis:158

O04603              	100.00%		P0CD88              	100.00%
Bootstrap support for O04603 as seed ortholog is 100%.
Bootstrap support for P0CD88 as seed ortholog is 100%.

Group of orthologs #155. Best score 158 bits
Score difference with first non-orthologous sequence - A.thaliana:158 C.trachomatis:158

P56797              	100.00%		O84687              	100.00%
Bootstrap support for P56797 as seed ortholog is 100%.
Bootstrap support for O84687 as seed ortholog is 100%.

Group of orthologs #156. Best score 157 bits
Score difference with first non-orthologous sequence - A.thaliana:49 C.trachomatis:157

P56793              	100.00%		P0CD83              	100.00%
Bootstrap support for P56793 as seed ortholog is 99%.
Bootstrap support for P0CD83 as seed ortholog is 100%.

Group of orthologs #157. Best score 157 bits
Score difference with first non-orthologous sequence - A.thaliana:157 C.trachomatis:157

Q9LSA9              	100.00%		O84685              	100.00%
Bootstrap support for Q9LSA9 as seed ortholog is 100%.
Bootstrap support for O84685 as seed ortholog is 100%.

Group of orthologs #158. Best score 156 bits
Score difference with first non-orthologous sequence - A.thaliana:53 C.trachomatis:156

Q9MAP3              	100.00%		O84321              	100.00%
Q9FHM3              	26.37%		
Bootstrap support for Q9MAP3 as seed ortholog is 99%.
Bootstrap support for O84321 as seed ortholog is 100%.

Group of orthologs #159. Best score 156 bits
Score difference with first non-orthologous sequence - A.thaliana:156 C.trachomatis:156

P69834              	100.00%		O84468              	100.00%
Bootstrap support for P69834 as seed ortholog is 100%.
Bootstrap support for O84468 as seed ortholog is 100%.

Group of orthologs #160. Best score 155 bits
Score difference with first non-orthologous sequence - A.thaliana:18 C.trachomatis:155

Q9LRN8              	100.00%		O84533              	100.00%
Bootstrap support for Q9LRN8 as seed ortholog is 72%.
Alternative seed ortholog is Q9SKX4 (18 bits away from this cluster)
Bootstrap support for O84533 as seed ortholog is 100%.

Group of orthologs #161. Best score 154 bits
Score difference with first non-orthologous sequence - A.thaliana:154 C.trachomatis:154

Q9SAU2              	100.00%		O84123              	100.00%
Bootstrap support for Q9SAU2 as seed ortholog is 100%.
Bootstrap support for O84123 as seed ortholog is 100%.

Group of orthologs #162. Best score 153 bits
Score difference with first non-orthologous sequence - A.thaliana:19 C.trachomatis:153

Q8GWP5              	100.00%		O84735              	100.00%
Bootstrap support for Q8GWP5 as seed ortholog is 66%.
Alternative seed ortholog is Q9STY4 (19 bits away from this cluster)
Bootstrap support for O84735 as seed ortholog is 100%.

Group of orthologs #163. Best score 151 bits
Score difference with first non-orthologous sequence - A.thaliana:74 C.trachomatis:151

Q949Q0              	100.00%		O84719              	100.00%
Bootstrap support for Q949Q0 as seed ortholog is 98%.
Bootstrap support for O84719 as seed ortholog is 100%.

Group of orthologs #164. Best score 150 bits
Score difference with first non-orthologous sequence - A.thaliana:150 C.trachomatis:150

F4JIP6              	100.00%		P0CD76              	100.00%
F4JGP6              	52.26%		
Bootstrap support for F4JIP6 as seed ortholog is 100%.
Bootstrap support for P0CD76 as seed ortholog is 100%.

Group of orthologs #165. Best score 149 bits
Score difference with first non-orthologous sequence - A.thaliana:96 C.trachomatis:149

P56798              	100.00%		O84527              	100.00%
Bootstrap support for P56798 as seed ortholog is 99%.
Bootstrap support for O84527 as seed ortholog is 100%.

Group of orthologs #166. Best score 149 bits
Score difference with first non-orthologous sequence - A.thaliana:149 C.trachomatis:149

Q9C712              	100.00%		O84535              	100.00%
Bootstrap support for Q9C712 as seed ortholog is 100%.
Bootstrap support for O84535 as seed ortholog is 100%.

Group of orthologs #167. Best score 146 bits
Score difference with first non-orthologous sequence - A.thaliana:146 C.trachomatis:146

O22886              	100.00%		O84752              	100.00%
Q93ZB6              	39.49%		
Bootstrap support for O22886 as seed ortholog is 100%.
Bootstrap support for O84752 as seed ortholog is 100%.

Group of orthologs #168. Best score 146 bits
Score difference with first non-orthologous sequence - A.thaliana:75 C.trachomatis:146

P56802              	100.00%		P0CE03              	100.00%
Bootstrap support for P56802 as seed ortholog is 100%.
Bootstrap support for P0CE03 as seed ortholog is 100%.

Group of orthologs #169. Best score 144 bits
Score difference with first non-orthologous sequence - A.thaliana:144 C.trachomatis:144

O82314              	100.00%		O84463              	100.00%
Bootstrap support for O82314 as seed ortholog is 100%.
Bootstrap support for O84463 as seed ortholog is 100%.

Group of orthologs #170. Best score 143 bits
Score difference with first non-orthologous sequence - A.thaliana:143 C.trachomatis:143

P50651              	100.00%		O84835              	100.00%
Q6Y657              	62.98%		
Q9LSD0              	62.98%		
Bootstrap support for P50651 as seed ortholog is 100%.
Bootstrap support for O84835 as seed ortholog is 100%.

Group of orthologs #171. Best score 142 bits
Score difference with first non-orthologous sequence - A.thaliana:142 C.trachomatis:142

Q5XF75              	100.00%		O84686              	100.00%
Bootstrap support for Q5XF75 as seed ortholog is 100%.
Bootstrap support for O84686 as seed ortholog is 100%.

Group of orthologs #172. Best score 141 bits
Score difference with first non-orthologous sequence - A.thaliana:57 C.trachomatis:141

P61841              	100.00%		P0CE06              	100.00%
Bootstrap support for P61841 as seed ortholog is 99%.
Bootstrap support for P0CE06 as seed ortholog is 100%.

Group of orthologs #173. Best score 139 bits
Score difference with first non-orthologous sequence - A.thaliana:139 C.trachomatis:139

F4IF99              	100.00%		O84416              	100.00%
Bootstrap support for F4IF99 as seed ortholog is 100%.
Bootstrap support for O84416 as seed ortholog is 100%.

Group of orthologs #174. Best score 138 bits
Score difference with first non-orthologous sequence - A.thaliana:72 C.trachomatis:44

Q8VZW6              	100.00%		O84757              	100.00%
Bootstrap support for Q8VZW6 as seed ortholog is 99%.
Bootstrap support for O84757 as seed ortholog is 96%.

Group of orthologs #175. Best score 137 bits
Score difference with first non-orthologous sequence - A.thaliana:36 C.trachomatis:137

P56792              	100.00%		P0CD81              	100.00%
Bootstrap support for P56792 as seed ortholog is 97%.
Bootstrap support for P0CD81 as seed ortholog is 100%.

Group of orthologs #176. Best score 136 bits
Score difference with first non-orthologous sequence - A.thaliana:136 C.trachomatis:136

Q9ZU38              	100.00%		O84215              	100.00%
Q9C998              	56.25%		
Q9S726              	38.02%		
Bootstrap support for Q9ZU38 as seed ortholog is 100%.
Bootstrap support for O84215 as seed ortholog is 100%.

Group of orthologs #177. Best score 136 bits
Score difference with first non-orthologous sequence - A.thaliana:17 C.trachomatis:136

O65090              	100.00%		O84358              	100.00%
Bootstrap support for O65090 as seed ortholog is 75%.
Bootstrap support for O84358 as seed ortholog is 100%.

Group of orthologs #178. Best score 135 bits
Score difference with first non-orthologous sequence - A.thaliana:135 C.trachomatis:88

P05466              	100.00%		O84371              	100.00%
Q9FVP6              	100.00%		
Bootstrap support for P05466 as seed ortholog is 100%.
Bootstrap support for Q9FVP6 as seed ortholog is 100%.
Bootstrap support for O84371 as seed ortholog is 97%.

Group of orthologs #179. Best score 134 bits
Score difference with first non-orthologous sequence - A.thaliana:134 C.trachomatis:134

P42043              	100.00%		O84492              	100.00%
O04921              	45.67%		
Bootstrap support for P42043 as seed ortholog is 100%.
Bootstrap support for O84492 as seed ortholog is 100%.

Group of orthologs #180. Best score 134 bits
Score difference with first non-orthologous sequence - A.thaliana:134 C.trachomatis:134

Q9SU91              	100.00%		O84536              	100.00%
Bootstrap support for Q9SU91 as seed ortholog is 100%.
Bootstrap support for O84536 as seed ortholog is 100%.

Group of orthologs #181. Best score 133 bits
Score difference with first non-orthologous sequence - A.thaliana:133 C.trachomatis:133

O81852              	100.00%		O84367              	100.00%
Q9S702              	100.00%		
O23653              	77.99%		
Q9SA18              	74.87%		
Q9LYU8              	62.05%		
Bootstrap support for O81852 as seed ortholog is 100%.
Bootstrap support for Q9S702 as seed ortholog is 100%.
Bootstrap support for O84367 as seed ortholog is 100%.

Group of orthologs #182. Best score 131 bits
Score difference with first non-orthologous sequence - A.thaliana:131 C.trachomatis:131

Q9LRR0              	100.00%		O84633              	100.00%
Q9LUD9              	92.72%		
Q9LUE1              	85.97%		
Q9LIA0              	82.24%		
Q9LHR4              	81.35%		
P34802              	56.66%		
Q9SLG2              	50.44%		
Q9ZU77              	50.44%		
O04046              	48.31%		
Q9LJY2              	44.23%		
O22043              	41.21%		
Q39108              	15.63%		
Bootstrap support for Q9LRR0 as seed ortholog is 100%.
Bootstrap support for O84633 as seed ortholog is 100%.

Group of orthologs #183. Best score 130 bits
Score difference with first non-orthologous sequence - A.thaliana:69 C.trachomatis:130

P93014              	100.00%		P0A4C8              	100.00%
Bootstrap support for P93014 as seed ortholog is 99%.
Bootstrap support for P0A4C8 as seed ortholog is 100%.

Group of orthologs #184. Best score 128 bits
Score difference with first non-orthologous sequence - A.thaliana:15 C.trachomatis:128

Q9M1X0              	100.00%		O84684              	100.00%
Bootstrap support for Q9M1X0 as seed ortholog is 75%.
Bootstrap support for O84684 as seed ortholog is 100%.

Group of orthologs #185. Best score 124 bits
Score difference with first non-orthologous sequence - A.thaliana:124 C.trachomatis:124

O82413              	100.00%		O84547              	100.00%
F4KFB0              	40.43%		
Bootstrap support for O82413 as seed ortholog is 100%.
Bootstrap support for O84547 as seed ortholog is 100%.

Group of orthologs #186. Best score 124 bits
Score difference with first non-orthologous sequence - A.thaliana:124 C.trachomatis:124

Q5S4X7              	100.00%		O84380              	100.00%
Bootstrap support for Q5S4X7 as seed ortholog is 100%.
Bootstrap support for O84380 as seed ortholog is 100%.

Group of orthologs #187. Best score 123 bits
Score difference with first non-orthologous sequence - A.thaliana:60 C.trachomatis:123

Q9SA71              	100.00%		O84548              	100.00%
Q9SB41              	81.65%		
Q9C5L3              	55.39%		
O23596              	46.27%		
Q9SL56              	46.05%		
Bootstrap support for Q9SA71 as seed ortholog is 91%.
Bootstrap support for O84548 as seed ortholog is 100%.

Group of orthologs #188. Best score 121 bits
Score difference with first non-orthologous sequence - A.thaliana:40 C.trachomatis:121

Q9S777              	100.00%		O84781              	100.00%
Q9S725              	57.68%		
Q42524              	56.06%		
Q9LU36              	50.51%		
Q9M0X9              	28.99%		
Q9LQ12              	25.15%		
Q84P21              	24.14%		
Q84P25              	22.42%		
P0C5B6              	22.32%		
Q84P24              	22.02%		
Q3E6Y4              	21.72%		
Q84P23              	20.00%		
Q84P26              	19.49%		
Q9SMT7              	8.08%		
Q9LPK6              	5.56%		
Bootstrap support for Q9S777 as seed ortholog is 87%.
Bootstrap support for O84781 as seed ortholog is 100%.

Group of orthologs #189. Best score 121 bits
Score difference with first non-orthologous sequence - A.thaliana:8 C.trachomatis:121

Q84JF7              	100.00%		O84130              	100.00%
Q9ZUU1              	47.20%		
Bootstrap support for Q84JF7 as seed ortholog is 61%.
Alternative seed ortholog is Q9FIJ7 (8 bits away from this cluster)
Bootstrap support for O84130 as seed ortholog is 100%.

Group of orthologs #190. Best score 121 bits
Score difference with first non-orthologous sequence - A.thaliana:121 C.trachomatis:121

Q9LX13              	100.00%		O84537              	100.00%
Q9SIE3              	61.56%		
Bootstrap support for Q9LX13 as seed ortholog is 100%.
Bootstrap support for O84537 as seed ortholog is 100%.

Group of orthologs #191. Best score 120 bits
Score difference with first non-orthologous sequence - A.thaliana:120 C.trachomatis:120

Q8GW64              	100.00%		O84806              	100.00%
Q9LF14              	24.67%		
Q6NLS8              	24.23%		
Q9FKN4              	23.35%		
Bootstrap support for Q8GW64 as seed ortholog is 100%.
Bootstrap support for O84806 as seed ortholog is 100%.

Group of orthologs #192. Best score 119 bits
Score difference with first non-orthologous sequence - A.thaliana:119 C.trachomatis:119

O23053              	100.00%		O84075              	100.00%
O80885              	100.00%		
Bootstrap support for O23053 as seed ortholog is 100%.
Bootstrap support for O80885 as seed ortholog is 100%.
Bootstrap support for O84075 as seed ortholog is 100%.

Group of orthologs #193. Best score 119 bits
Score difference with first non-orthologous sequence - A.thaliana:67 C.trachomatis:119

O49730              	100.00%		O84762              	100.00%
Bootstrap support for O49730 as seed ortholog is 97%.
Bootstrap support for O84762 as seed ortholog is 100%.

Group of orthologs #194. Best score 119 bits
Score difference with first non-orthologous sequence - A.thaliana:33 C.trachomatis:119

Q9SYL9              	100.00%		O84127              	100.00%
Bootstrap support for Q9SYL9 as seed ortholog is 94%.
Bootstrap support for O84127 as seed ortholog is 100%.

Group of orthologs #195. Best score 117 bits
Score difference with first non-orthologous sequence - A.thaliana:117 C.trachomatis:117

O23614              	100.00%		O84448              	100.00%
F4J3G5              	14.75%		
F4KHG6              	8.43%		
Bootstrap support for O23614 as seed ortholog is 100%.
Bootstrap support for O84448 as seed ortholog is 100%.

Group of orthologs #196. Best score 117 bits
Score difference with first non-orthologous sequence - A.thaliana:35 C.trachomatis:117

Q9FUZ2              	100.00%		O84357              	100.00%
Bootstrap support for Q9FUZ2 as seed ortholog is 91%.
Bootstrap support for O84357 as seed ortholog is 100%.

Group of orthologs #197. Best score 116 bits
Score difference with first non-orthologous sequence - A.thaliana:116 C.trachomatis:116

Q9SQT8              	100.00%		O84375              	100.00%
Bootstrap support for Q9SQT8 as seed ortholog is 100%.
Bootstrap support for O84375 as seed ortholog is 100%.

Group of orthologs #198. Best score 115 bits
Score difference with first non-orthologous sequence - A.thaliana:16 C.trachomatis:115

P39207              	100.00%		O84508              	100.00%
O64903              	40.00%		
O49203              	40.00%		
Q8LAH8              	38.95%		
Bootstrap support for P39207 as seed ortholog is 78%.
Bootstrap support for O84508 as seed ortholog is 100%.

Group of orthologs #199. Best score 113 bits
Score difference with first non-orthologous sequence - A.thaliana:113 C.trachomatis:113

O81014              	100.00%		O84810              	100.00%
Bootstrap support for O81014 as seed ortholog is 100%.
Bootstrap support for O84810 as seed ortholog is 100%.

Group of orthologs #200. Best score 113 bits
Score difference with first non-orthologous sequence - A.thaliana:113 C.trachomatis:113

Q8GUP2              	100.00%		O84837              	100.00%
Bootstrap support for Q8GUP2 as seed ortholog is 100%.
Bootstrap support for O84837 as seed ortholog is 100%.

Group of orthologs #201. Best score 112 bits
Score difference with first non-orthologous sequence - A.thaliana:112 C.trachomatis:112

P56799              	100.00%		O84631              	100.00%
Bootstrap support for P56799 as seed ortholog is 100%.
Bootstrap support for O84631 as seed ortholog is 100%.

Group of orthologs #202. Best score 109 bits
Score difference with first non-orthologous sequence - A.thaliana:109 C.trachomatis:109

Q42529              	100.00%		O84173              	100.00%
O22765              	60.65%		
Bootstrap support for Q42529 as seed ortholog is 100%.
Bootstrap support for O84173 as seed ortholog is 100%.

Group of orthologs #203. Best score 107 bits
Score difference with first non-orthologous sequence - A.thaliana:41 C.trachomatis:107

Q9XJ27              	100.00%		O84128              	100.00%
Bootstrap support for Q9XJ27 as seed ortholog is 95%.
Bootstrap support for O84128 as seed ortholog is 100%.

Group of orthologs #204. Best score 106 bits
Score difference with first non-orthologous sequence - A.thaliana:106 C.trachomatis:106

O82234              	100.00%		O84840              	100.00%
Q94B52              	100.00%		
Bootstrap support for O82234 as seed ortholog is 100%.
Bootstrap support for Q94B52 as seed ortholog is 100%.
Bootstrap support for O84840 as seed ortholog is 100%.

Group of orthologs #205. Best score 106 bits
Score difference with first non-orthologous sequence - A.thaliana:106 C.trachomatis:106

Q94JM2              	100.00%		O84033              	100.00%
Bootstrap support for Q94JM2 as seed ortholog is 100%.
Bootstrap support for O84033 as seed ortholog is 100%.

Group of orthologs #206. Best score 104 bits
Score difference with first non-orthologous sequence - A.thaliana:104 C.trachomatis:104

O80575              	100.00%		O84737              	100.00%
Bootstrap support for O80575 as seed ortholog is 100%.
Bootstrap support for O84737 as seed ortholog is 100%.

Group of orthologs #207. Best score 102 bits
Score difference with first non-orthologous sequence - A.thaliana:102 C.trachomatis:102

P56762              	100.00%		P0CE08              	100.00%
Bootstrap support for P56762 as seed ortholog is 100%.
Bootstrap support for P0CE08 as seed ortholog is 100%.

Group of orthologs #208. Best score 102 bits
Score difference with first non-orthologous sequence - A.thaliana:47 C.trachomatis:102

P56808              	100.00%		P66480              	100.00%
Bootstrap support for P56808 as seed ortholog is 99%.
Bootstrap support for P66480 as seed ortholog is 100%.

Group of orthologs #209. Best score 102 bits
Score difference with first non-orthologous sequence - A.thaliana:21 C.trachomatis:20

Q9C9W0              	100.00%		O84132              	100.00%
Bootstrap support for Q9C9W0 as seed ortholog is 75%.
Bootstrap support for O84132 as seed ortholog is 70%.
Alternative seed ortholog is O84071 (20 bits away from this cluster)

Group of orthologs #210. Best score 102 bits
Score difference with first non-orthologous sequence - A.thaliana:102 C.trachomatis:102

Q9SKU8              	100.00%		O84410              	100.00%
Bootstrap support for Q9SKU8 as seed ortholog is 100%.
Bootstrap support for O84410 as seed ortholog is 100%.

Group of orthologs #211. Best score 101 bits
Score difference with first non-orthologous sequence - A.thaliana:101 C.trachomatis:101

Q9FYR6              	100.00%		P36431              	100.00%
Q9M1R2              	29.33%		
Q9LEV2              	5.04%		
Bootstrap support for Q9FYR6 as seed ortholog is 100%.
Bootstrap support for P36431 as seed ortholog is 100%.

Group of orthologs #212. Best score 101 bits
Score difference with first non-orthologous sequence - A.thaliana:39 C.trachomatis:101

P42732              	100.00%		P0CE04              	100.00%
Bootstrap support for P42732 as seed ortholog is 83%.
Bootstrap support for P0CE04 as seed ortholog is 100%.

Group of orthologs #213. Best score 100 bits
Score difference with first non-orthologous sequence - A.thaliana:39 C.trachomatis:100

Q9SUM3              	100.00%		O84442              	100.00%
Q9SB48              	60.59%		
Q6NPS8              	13.49%		
Bootstrap support for Q9SUM3 as seed ortholog is 81%.
Bootstrap support for O84442 as seed ortholog is 100%.

Group of orthologs #214. Best score 100 bits
Score difference with first non-orthologous sequence - A.thaliana:100 C.trachomatis:100

Q9LZX6              	100.00%		O84366              	100.00%
Q9FVC8              	87.37%		
Bootstrap support for Q9LZX6 as seed ortholog is 100%.
Bootstrap support for O84366 as seed ortholog is 100%.

Group of orthologs #215. Best score 99 bits
Score difference with first non-orthologous sequence - A.thaliana:50 C.trachomatis:99

Q84VY5              	100.00%		O84779              	100.00%
O49623              	63.56%		
Q42546              	55.96%		
Q8GY63              	54.40%		
Q38945              	23.49%		
Q9M0Y6              	6.22%		
Bootstrap support for Q84VY5 as seed ortholog is 89%.
Bootstrap support for O84779 as seed ortholog is 100%.

Group of orthologs #216. Best score 99 bits
Score difference with first non-orthologous sequence - A.thaliana:25 C.trachomatis:99

P36210              	100.00%		O84318              	100.00%
P36212              	100.00%		
P36211              	60.62%		
Bootstrap support for P36210 as seed ortholog is 91%.
Bootstrap support for P36212 as seed ortholog is 65%.
Alternative seed ortholog is O23238 (25 bits away from this cluster)
Bootstrap support for O84318 as seed ortholog is 100%.

Group of orthologs #217. Best score 99 bits
Score difference with first non-orthologous sequence - A.thaliana:99 C.trachomatis:99

O49653              	100.00%		O84200              	100.00%
Bootstrap support for O49653 as seed ortholog is 100%.
Bootstrap support for O84200 as seed ortholog is 100%.

Group of orthologs #218. Best score 99 bits
Score difference with first non-orthologous sequence - A.thaliana:15 C.trachomatis:99

Q3ED65              	100.00%		O84435              	100.00%
Bootstrap support for Q3ED65 as seed ortholog is 66%.
Alternative seed ortholog is Q9LVC8 (15 bits away from this cluster)
Bootstrap support for O84435 as seed ortholog is 100%.

Group of orthologs #219. Best score 97 bits
Score difference with first non-orthologous sequence - A.thaliana:97 C.trachomatis:97

P56801              	100.00%		P0CE07              	100.00%
Bootstrap support for P56801 as seed ortholog is 100%.
Bootstrap support for P0CE07 as seed ortholog is 100%.

Group of orthologs #220. Best score 96 bits
Score difference with first non-orthologous sequence - A.thaliana:40 C.trachomatis:96

P21216              	100.00%		O84777              	100.00%
Q9LFF9              	67.62%		
Q93V56              	64.47%		
O82793              	63.32%		
O82597              	61.89%		
Bootstrap support for P21216 as seed ortholog is 89%.
Bootstrap support for O84777 as seed ortholog is 100%.

Group of orthologs #221. Best score 96 bits
Score difference with first non-orthologous sequence - A.thaliana:96 C.trachomatis:96

Q8VZA5              	100.00%		P0CE14              	100.00%
Bootstrap support for Q8VZA5 as seed ortholog is 100%.
Bootstrap support for P0CE14 as seed ortholog is 100%.

Group of orthologs #222. Best score 96 bits
Score difference with first non-orthologous sequence - A.thaliana:96 C.trachomatis:96

Q9T034              	100.00%		O84843              	100.00%
Bootstrap support for Q9T034 as seed ortholog is 100%.
Bootstrap support for O84843 as seed ortholog is 100%.

Group of orthologs #223. Best score 94 bits
Score difference with first non-orthologous sequence - A.thaliana:23 C.trachomatis:94

Q9XQC7              	100.00%		P36424              	100.00%
Q9C8X4              	19.09%		
Bootstrap support for Q9XQC7 as seed ortholog is 81%.
Bootstrap support for P36424 as seed ortholog is 100%.

Group of orthologs #224. Best score 94 bits
Score difference with first non-orthologous sequence - A.thaliana:20 C.trachomatis:17

Q9AT00              	100.00%		O84660              	100.00%
Bootstrap support for Q9AT00 as seed ortholog is 74%.
Alternative seed ortholog is Q9C8T1 (20 bits away from this cluster)
Bootstrap support for O84660 as seed ortholog is 67%.
Alternative seed ortholog is O84183 (17 bits away from this cluster)

Group of orthologs #225. Best score 93 bits
Score difference with first non-orthologous sequence - A.thaliana:93 C.trachomatis:93

F4HY43              	100.00%		O84338              	100.00%
Q9CAQ8              	18.21%		
Q9CAM7              	17.70%		
Bootstrap support for F4HY43 as seed ortholog is 100%.
Bootstrap support for O84338 as seed ortholog is 100%.

Group of orthologs #226. Best score 93 bits
Score difference with first non-orthologous sequence - A.thaliana:93 C.trachomatis:93

F4K000              	100.00%		O84391              	100.00%
Q9SG17              	60.54%		
Bootstrap support for F4K000 as seed ortholog is 100%.
Bootstrap support for O84391 as seed ortholog is 100%.

Group of orthologs #227. Best score 92 bits
Score difference with first non-orthologous sequence - A.thaliana:92 C.trachomatis:92

Q9LSZ9              	100.00%		O84782              	100.00%
Q9M304              	91.96%		
F4JF53              	51.40%		
Q94IB8              	5.36%		
Bootstrap support for Q9LSZ9 as seed ortholog is 100%.
Bootstrap support for O84782 as seed ortholog is 100%.

Group of orthologs #228. Best score 91 bits
Score difference with first non-orthologous sequence - A.thaliana:27 C.trachomatis:32

Q9SSL0              	100.00%		O84822              	100.00%
F4KH14              	26.67%		
Bootstrap support for Q9SSL0 as seed ortholog is 70%.
Alternative seed ortholog is P57750 (27 bits away from this cluster)
Bootstrap support for O84822 as seed ortholog is 76%.

Group of orthologs #229. Best score 89 bits
Score difference with first non-orthologous sequence - A.thaliana:89 C.trachomatis:89

Q9C6S5              	100.00%		O84218              	100.00%
Q9C6S4              	73.81%		
Q9FFL1              	68.95%		
Q9LH39              	51.16%		
Q9LHN7              	36.02%		
Bootstrap support for Q9C6S5 as seed ortholog is 100%.
Bootstrap support for O84218 as seed ortholog is 100%.

Group of orthologs #230. Best score 89 bits
Score difference with first non-orthologous sequence - A.thaliana:89 C.trachomatis:89

Q570G3              	100.00%		O84384              	100.00%
Q6NNG9              	17.60%		
F4JGA4              	11.99%		
Bootstrap support for Q570G3 as seed ortholog is 100%.
Bootstrap support for O84384 as seed ortholog is 100%.

Group of orthologs #231. Best score 88 bits
Score difference with first non-orthologous sequence - A.thaliana:88 C.trachomatis:88

Q1ECK2              	100.00%		P0CD84              	100.00%
Q8LD39              	93.13%		
Q9M385              	7.30%		
Bootstrap support for Q1ECK2 as seed ortholog is 100%.
Bootstrap support for P0CD84 as seed ortholog is 100%.

Group of orthologs #232. Best score 88 bits
Score difference with first non-orthologous sequence - A.thaliana:30 C.trachomatis:88

Q8GYJ9              	100.00%		O84390              	100.00%
Q8GUN2              	34.05%		
Bootstrap support for Q8GYJ9 as seed ortholog is 94%.
Bootstrap support for O84390 as seed ortholog is 100%.

Group of orthologs #233. Best score 88 bits
Score difference with first non-orthologous sequence - A.thaliana:35 C.trachomatis:22

Q9LK65              	100.00%		O84258              	100.00%
Q84R21              	75.84%		
Bootstrap support for Q9LK65 as seed ortholog is 82%.
Bootstrap support for O84258 as seed ortholog is 69%.
Alternative seed ortholog is O84259 (22 bits away from this cluster)

Group of orthologs #234. Best score 88 bits
Score difference with first non-orthologous sequence - A.thaliana:88 C.trachomatis:88

Q8VY61              	100.00%		O84532              	100.00%
Bootstrap support for Q8VY61 as seed ortholog is 100%.
Bootstrap support for O84532 as seed ortholog is 100%.

Group of orthologs #235. Best score 88 bits
Score difference with first non-orthologous sequence - A.thaliana:88 C.trachomatis:88

Q94B35              	100.00%		O84867              	100.00%
Bootstrap support for Q94B35 as seed ortholog is 100%.
Bootstrap support for O84867 as seed ortholog is 100%.

Group of orthologs #236. Best score 88 bits
Score difference with first non-orthologous sequence - A.thaliana:1 C.trachomatis:88

Q9FH91              	100.00%		O84650              	100.00%
Bootstrap support for Q9FH91 as seed ortholog is 49%.
Alternative seed ortholog is Q8H128 (1 bits away from this cluster)
Bootstrap support for O84650 as seed ortholog is 100%.

Group of orthologs #237. Best score 87 bits
Score difference with first non-orthologous sequence - A.thaliana:87 C.trachomatis:87

Q8LB02              	100.00%		O84595              	100.00%
Q8LBZ7              	91.62%		
Q9FJP9              	46.71%		
Bootstrap support for Q8LB02 as seed ortholog is 100%.
Bootstrap support for O84595 as seed ortholog is 100%.

Group of orthologs #238. Best score 87 bits
Score difference with first non-orthologous sequence - A.thaliana:36 C.trachomatis:87

Q8LCN1              	100.00%		O84842              	100.00%
Bootstrap support for Q8LCN1 as seed ortholog is 97%.
Bootstrap support for O84842 as seed ortholog is 100%.

Group of orthologs #239. Best score 86 bits
Score difference with first non-orthologous sequence - A.thaliana:10 C.trachomatis:16

Q8LEF6              	100.00%		O84695              	100.00%
                    	       		O84205              	12.47%
                    	       		O84204              	12.25%
                    	       		O84696              	12.04%
Bootstrap support for Q8LEF6 as seed ortholog is 48%.
Alternative seed ortholog is Q8H1R4 (10 bits away from this cluster)
Bootstrap support for O84695 as seed ortholog is 70%.
Alternative seed ortholog is O84183 (16 bits away from this cluster)

Group of orthologs #240. Best score 86 bits
Score difference with first non-orthologous sequence - A.thaliana:86 C.trachomatis:86

Q0WUQ7              	100.00%		O84578              	100.00%
F4HZG9              	8.01%		
Bootstrap support for Q0WUQ7 as seed ortholog is 100%.
Bootstrap support for O84578 as seed ortholog is 100%.

Group of orthologs #241. Best score 85 bits
Score difference with first non-orthologous sequence - A.thaliana:13 C.trachomatis:85

Q38879              	100.00%		O84544              	100.00%
Q9CAS1              	17.68%		
Q9XIF4              	16.57%		
Q39239              	15.47%		
Q39241              	13.81%		
P29448              	11.05%		
Q9C9Y6              	6.08%		
Q42403              	5.52%		
Bootstrap support for Q38879 as seed ortholog is 74%.
Alternative seed ortholog is Q9SEU8 (13 bits away from this cluster)
Bootstrap support for O84544 as seed ortholog is 100%.

Group of orthologs #242. Best score 85 bits
Score difference with first non-orthologous sequence - A.thaliana:85 C.trachomatis:85

F4J6X3              	100.00%		O84599              	100.00%
Q9SRQ4              	100.00%		
A2RVM4              	63.01%		
Bootstrap support for F4J6X3 as seed ortholog is 100%.
Bootstrap support for Q9SRQ4 as seed ortholog is 100%.
Bootstrap support for O84599 as seed ortholog is 100%.

Group of orthologs #243. Best score 83 bits
Score difference with first non-orthologous sequence - A.thaliana:83 C.trachomatis:83

Q9LMX8              	100.00%		O84189              	100.00%
Q84WW2              	34.35%		
Q8LEV7              	26.96%		
Q8LG70              	26.30%		
Q9FIN1              	25.43%		
Bootstrap support for Q9LMX8 as seed ortholog is 100%.
Bootstrap support for O84189 as seed ortholog is 100%.

Group of orthologs #244. Best score 82 bits
Score difference with first non-orthologous sequence - A.thaliana:82 C.trachomatis:82

Q9C9T8              	100.00%		O84766              	100.00%
Bootstrap support for Q9C9T8 as seed ortholog is 100%.
Bootstrap support for O84766 as seed ortholog is 100%.

Group of orthologs #245. Best score 82 bits
Score difference with first non-orthologous sequence - A.thaliana:42 C.trachomatis:82

Q9SX68              	100.00%		P0CD85              	100.00%
Bootstrap support for Q9SX68 as seed ortholog is 97%.
Bootstrap support for P0CD85 as seed ortholog is 100%.

Group of orthologs #246. Best score 81 bits
Score difference with first non-orthologous sequence - A.thaliana:81 C.trachomatis:81

F4K5T6              	100.00%		O84851              	100.00%
Q6IDB6              	100.00%		
Q9MA89              	27.79%		
Bootstrap support for F4K5T6 as seed ortholog is 100%.
Bootstrap support for Q6IDB6 as seed ortholog is 100%.
Bootstrap support for O84851 as seed ortholog is 100%.

Group of orthologs #247. Best score 79 bits
Score difference with first non-orthologous sequence - A.thaliana:79 C.trachomatis:79

Q38946              	100.00%		O84778              	100.00%
Q43314              	100.00%		
Q9S7A0              	92.97%		
F4I9M9              	9.38%		
Bootstrap support for Q38946 as seed ortholog is 100%.
Bootstrap support for Q43314 as seed ortholog is 100%.
Bootstrap support for O84778 as seed ortholog is 100%.

Group of orthologs #248. Best score 79 bits
Score difference with first non-orthologous sequence - A.thaliana:79 C.trachomatis:79

Q9LLC1              	100.00%		O84125              	100.00%
Q42533              	31.88%		
Bootstrap support for Q9LLC1 as seed ortholog is 100%.
Bootstrap support for O84125 as seed ortholog is 100%.

Group of orthologs #249. Best score 79 bits
Score difference with first non-orthologous sequence - A.thaliana:79 C.trachomatis:79

Q84V22              	100.00%		P0CD79              	100.00%
Bootstrap support for Q84V22 as seed ortholog is 100%.
Bootstrap support for P0CD79 as seed ortholog is 100%.

Group of orthologs #250. Best score 78 bits
Score difference with first non-orthologous sequence - A.thaliana:78 C.trachomatis:78

Q682U6              	100.00%		O84263              	100.00%
                    	       		O84541              	6.53%
Bootstrap support for Q682U6 as seed ortholog is 100%.
Bootstrap support for O84263 as seed ortholog is 100%.

Group of orthologs #251. Best score 78 bits
Score difference with first non-orthologous sequence - A.thaliana:20 C.trachomatis:78

Q8VYI4              	100.00%		O84368              	100.00%
Bootstrap support for Q8VYI4 as seed ortholog is 66%.
Alternative seed ortholog is Q93Z70 (20 bits away from this cluster)
Bootstrap support for O84368 as seed ortholog is 100%.

Group of orthologs #252. Best score 77 bits
Score difference with first non-orthologous sequence - A.thaliana:77 C.trachomatis:77

P55826              	100.00%		O84750              	100.00%
Q8S9J1              	9.46%		
Bootstrap support for P55826 as seed ortholog is 100%.
Bootstrap support for O84750 as seed ortholog is 100%.

Group of orthologs #253. Best score 77 bits
Score difference with first non-orthologous sequence - A.thaliana:77 C.trachomatis:77

Q9FMI5              	100.00%		O84027              	100.00%
Bootstrap support for Q9FMI5 as seed ortholog is 100%.
Bootstrap support for O84027 as seed ortholog is 100%.

Group of orthologs #254. Best score 77 bits
Score difference with first non-orthologous sequence - A.thaliana:77 C.trachomatis:77

Q9M042              	100.00%		O84741              	100.00%
Bootstrap support for Q9M042 as seed ortholog is 100%.
Bootstrap support for O84741 as seed ortholog is 100%.

Group of orthologs #255. Best score 76 bits
Score difference with first non-orthologous sequence - A.thaliana:76 C.trachomatis:76

Q94AC6              	100.00%		P66123              	100.00%
Q9ZVX0              	100.00%		
Bootstrap support for Q94AC6 as seed ortholog is 100%.
Bootstrap support for Q9ZVX0 as seed ortholog is 100%.
Bootstrap support for P66123 as seed ortholog is 100%.

Group of orthologs #256. Best score 75 bits
Score difference with first non-orthologous sequence - A.thaliana:75 C.trachomatis:75

Q9LTQ0              	100.00%		O84299              	100.00%
Bootstrap support for Q9LTQ0 as seed ortholog is 100%.
Bootstrap support for O84299 as seed ortholog is 100%.

Group of orthologs #257. Best score 73 bits
Score difference with first non-orthologous sequence - A.thaliana:73 C.trachomatis:73

Q8W467              	100.00%		O84213              	100.00%
Q9LS71              	19.25%		
Bootstrap support for Q8W467 as seed ortholog is 100%.
Bootstrap support for O84213 as seed ortholog is 100%.

Group of orthologs #258. Best score 73 bits
Score difference with first non-orthologous sequence - A.thaliana:73 C.trachomatis:73

Q9LFG2              	100.00%		O84437              	100.00%
Bootstrap support for Q9LFG2 as seed ortholog is 100%.
Bootstrap support for O84437 as seed ortholog is 100%.

Group of orthologs #259. Best score 72 bits
Score difference with first non-orthologous sequence - A.thaliana:72 C.trachomatis:72

F4K0M7              	100.00%		O84353              	100.00%
F4K330              	45.81%		
Bootstrap support for F4K0M7 as seed ortholog is 100%.
Bootstrap support for O84353 as seed ortholog is 100%.

Group of orthologs #260. Best score 71 bits
Score difference with first non-orthologous sequence - A.thaliana:71 C.trachomatis:71

Q9LQK7              	100.00%		O84692              	100.00%
Bootstrap support for Q9LQK7 as seed ortholog is 100%.
Bootstrap support for O84692 as seed ortholog is 100%.

Group of orthologs #261. Best score 70 bits
Score difference with first non-orthologous sequence - A.thaliana:70 C.trachomatis:70

Q93VK0              	100.00%		O84680              	100.00%
Q9SPK4              	61.09%		
Q9LDQ1              	27.22%		
Q9C6P3              	25.40%		
P93759              	25.40%		
Q39016              	25.00%		
Q38869              	25.00%		
Q9SJ61              	24.80%		
Q9SSF8              	24.40%		
Q8W490              	23.99%		
Q9FMP5              	23.79%		
Q3E9C0              	22.98%		
Q9M101              	22.98%		
Q8W4I7              	22.78%		
Q9SZM3              	22.38%		
Q42396              	21.77%		
Q9ZSA3              	21.77%		
Q42479              	21.17%		
Q9ZSA4              	19.35%		
Q9S9V0              	18.95%		
Q9FKW4              	17.14%		
O64629              	15.73%		
Q1PE17              	15.32%		
Q8GUH5              	13.91%		
O64573              	12.70%		
Q39030              	12.50%		
Q9LUK3              	12.50%		
P42818              	12.10%		
Q9LTW5              	11.90%		
Q9SUA3              	11.69%		
Q9FG74              	11.29%		
Q64FQ2              	11.29%		
Q1PFB9              	10.28%		
F4I4F2              	9.88%		
Q39183              	9.68%		
O64682              	9.68%		
Q1PF34              	9.68%		
Q5HZ38              	9.07%		
O64741              	8.87%		
Q9LUL2              	8.67%		
Q05999              	8.47%		
Q9SYB9              	8.47%		
Q93V58              	8.27%		
P24100              	8.06%		
Q0V7S5              	7.26%		
P43288              	7.06%		
P43289              	6.85%		
Q39010              	6.45%		
Q9LMK8              	6.45%		
O80888              	6.45%		
Q9ZVP5              	6.45%		
Q39012              	6.25%		
Q9C9U2              	5.65%		
Q39011              	5.65%		
O23145              	5.44%		
Q8VZD5              	5.44%		
F4JVS7              	5.24%		
Q9FVS6              	5.24%		
Bootstrap support for Q93VK0 as seed ortholog is 100%.
Bootstrap support for O84680 as seed ortholog is 100%.

Group of orthologs #262. Best score 70 bits
Score difference with first non-orthologous sequence - A.thaliana:70 C.trachomatis:70

Q9SJX1              	100.00%		O84669              	100.00%
P49294              	62.91%		
P42804              	60.17%		
Bootstrap support for Q9SJX1 as seed ortholog is 100%.
Bootstrap support for O84669 as seed ortholog is 100%.

Group of orthologs #263. Best score 70 bits
Score difference with first non-orthologous sequence - A.thaliana:70 C.trachomatis:70

Q9CAK8              	100.00%		O84441              	100.00%
Bootstrap support for Q9CAK8 as seed ortholog is 100%.
Bootstrap support for O84441 as seed ortholog is 100%.

Group of orthologs #264. Best score 69 bits
Score difference with first non-orthologous sequence - A.thaliana:69 C.trachomatis:69

P56804              	100.00%		O84792              	100.00%
Bootstrap support for P56804 as seed ortholog is 100%.
Bootstrap support for O84792 as seed ortholog is 100%.

Group of orthologs #265. Best score 68 bits
Score difference with first non-orthologous sequence - A.thaliana:68 C.trachomatis:68

Q9LQL0              	100.00%		O84284              	100.00%
Bootstrap support for Q9LQL0 as seed ortholog is 100%.
Bootstrap support for O84284 as seed ortholog is 100%.

Group of orthologs #266. Best score 67 bits
Score difference with first non-orthologous sequence - A.thaliana:19 C.trachomatis:67

Q9SYZ4              	100.00%		O84466              	100.00%
O82326              	58.37%		
Q9SS61              	17.19%		
Q93W30              	14.93%		
Q9C504              	14.03%		
Bootstrap support for Q9SYZ4 as seed ortholog is 91%.
Bootstrap support for O84466 as seed ortholog is 100%.

Group of orthologs #267. Best score 65 bits
Score difference with first non-orthologous sequence - A.thaliana:65 C.trachomatis:65

Q9C8C1              	100.00%		O84426              	100.00%
F4IUE7              	54.19%		
Q8VY49              	53.98%		
F4IQJ6              	51.61%		
Bootstrap support for Q9C8C1 as seed ortholog is 100%.
Bootstrap support for O84426 as seed ortholog is 100%.

Group of orthologs #268. Best score 64 bits
Score difference with first non-orthologous sequence - A.thaliana:13 C.trachomatis:64

O65686              	100.00%		O84029              	100.00%
Q9LTS6              	47.88%		
Bootstrap support for O65686 as seed ortholog is 75%.
Bootstrap support for O84029 as seed ortholog is 100%.

Group of orthologs #269. Best score 64 bits
Score difference with first non-orthologous sequence - A.thaliana:64 C.trachomatis:64

Q9ZQH0              	100.00%		O84499              	100.00%
Bootstrap support for Q9ZQH0 as seed ortholog is 100%.
Bootstrap support for O84499 as seed ortholog is 100%.

Group of orthologs #270. Best score 63 bits
Score difference with first non-orthologous sequence - A.thaliana:63 C.trachomatis:63

Q9XIA6              	100.00%		P0CE05              	100.00%
Q9LHN1              	66.46%		
Bootstrap support for Q9XIA6 as seed ortholog is 100%.
Bootstrap support for P0CE05 as seed ortholog is 100%.

Group of orthologs #271. Best score 61 bits
Score difference with first non-orthologous sequence - A.thaliana:61 C.trachomatis:61

Q9C565              	100.00%		O84478              	100.00%
Q9FNB2              	38.87%		
Bootstrap support for Q9C565 as seed ortholog is 100%.
Bootstrap support for O84478 as seed ortholog is 100%.

Group of orthologs #272. Best score 61 bits
Score difference with first non-orthologous sequence - A.thaliana:61 C.trachomatis:61

P25864              	100.00%		O84809              	100.00%
Bootstrap support for P25864 as seed ortholog is 100%.
Bootstrap support for O84809 as seed ortholog is 100%.

Group of orthologs #273. Best score 61 bits
Score difference with first non-orthologous sequence - A.thaliana:61 C.trachomatis:61

Q8GYR7              	100.00%		Q46370              	100.00%
Bootstrap support for Q8GYR7 as seed ortholog is 100%.
Bootstrap support for Q46370 as seed ortholog is 100%.

Group of orthologs #274. Best score 61 bits
Score difference with first non-orthologous sequence - A.thaliana:61 C.trachomatis:61

Q8S9L5              	100.00%		O84713              	100.00%
Bootstrap support for Q8S9L5 as seed ortholog is 100%.
Bootstrap support for O84713 as seed ortholog is 100%.

Group of orthologs #275. Best score 60 bits
Score difference with first non-orthologous sequence - A.thaliana:13 C.trachomatis:60

Q9FFP9              	100.00%		O84147              	100.00%
P43292              	86.96%		
P43291              	77.63%		
Q9C958              	76.44%		
O64812              	65.78%		
Q940H6              	63.11%		
Q39193              	62.07%		
Q39192              	60.59%		
Q9SMQ4              	58.37%		
Q9M9E9              	57.93%		
Q9C562              	22.67%		
Q9STV4              	21.93%		
P92958              	21.78%		
Q93VD3              	21.04%		
Q2V452              	20.89%		
P92937              	20.74%		
Q9FLZ3              	20.59%		
Q8W1D5              	20.30%		
Q9LDI3              	20.15%		
Q9SEZ7              	20.00%		
O22971              	19.70%		
Q8RWC9              	19.70%		
O22932              	19.56%		
Q9LEU7              	19.41%		
Q9MAM1              	19.41%		
Q9XIW0              	19.26%		
O65554              	18.96%		
Q9FJ54              	18.81%		
O80902              	18.67%		
Q9LZW4              	18.52%		
Q9SN43              	18.52%		
Q94C40              	18.22%		
Q9LYQ8              	18.07%		
Q9SUL7              	18.07%		
Q9LP51              	17.63%		
Q9FJ55              	17.48%		
Q94CG0              	15.85%		
Q683C9              	13.04%		
Q9M077              	12.74%		
Q38872              	12.30%		
Q9ZV15              	11.85%		
Q38871              	11.41%		
Q6NLQ6              	11.11%		
Q38868              	10.96%		
Q9XF67              	9.93%		
Q4V3C8              	9.19%		
Q8RXT4              	8.44%		
F4I6E4              	8.30%		
F4KFD4              	8.30%		
Q9LW66              	8.30%		
Q8L7S7              	8.00%		
F4I1N8              	8.00%		
F4I2K0              	7.11%		
O80397              	6.37%		
Q9LT35              	6.22%		
Q8RXG3              	5.93%		
Q9S7U9              	5.78%		
Q9FX43              	5.33%		
Q8LST2              	5.19%		
O23236              	5.04%		
F4JSF8              	5.04%		
Q8S8Y8              	5.04%		
Bootstrap support for Q9FFP9 as seed ortholog is 65%.
Alternative seed ortholog is Q9SLI2 (13 bits away from this cluster)
Bootstrap support for O84147 as seed ortholog is 100%.

Group of orthologs #276. Best score 60 bits
Score difference with first non-orthologous sequence - A.thaliana:4 C.trachomatis:60

Q8GYL4              	100.00%		O84408              	100.00%
Bootstrap support for Q8GYL4 as seed ortholog is 53%.
Alternative seed ortholog is Q9LXE4 (4 bits away from this cluster)
Bootstrap support for O84408 as seed ortholog is 100%.

Group of orthologs #277. Best score 59 bits
Score difference with first non-orthologous sequence - A.thaliana:14 C.trachomatis:59

Q9FLB3              	100.00%		P26623              	100.00%
Q38936              	7.86%		
Q38935              	5.68%		
Bootstrap support for Q9FLB3 as seed ortholog is 72%.
Alternative seed ortholog is Q9SR70 (14 bits away from this cluster)
Bootstrap support for P26623 as seed ortholog is 100%.

Group of orthologs #278. Best score 59 bits
Score difference with first non-orthologous sequence - A.thaliana:59 C.trachomatis:59

P25873              	100.00%		P0CD82              	100.00%
Bootstrap support for P25873 as seed ortholog is 100%.
Bootstrap support for P0CD82 as seed ortholog is 100%.

Group of orthologs #279. Best score 58 bits
Score difference with first non-orthologous sequence - A.thaliana:58 C.trachomatis:58

Q9M2W3              	100.00%		O84803              	100.00%
O80952              	71.50%		
Bootstrap support for Q9M2W3 as seed ortholog is 100%.
Bootstrap support for O84803 as seed ortholog is 100%.

Group of orthologs #280. Best score 58 bits
Score difference with first non-orthologous sequence - A.thaliana:58 C.trachomatis:58

O48696              	100.00%		O84044              	100.00%
Bootstrap support for O48696 as seed ortholog is 100%.
Bootstrap support for O84044 as seed ortholog is 100%.

Group of orthologs #281. Best score 58 bits
Score difference with first non-orthologous sequence - A.thaliana:58 C.trachomatis:58

Q8L968              	100.00%		O84611              	100.00%
Bootstrap support for Q8L968 as seed ortholog is 100%.
Bootstrap support for O84611 as seed ortholog is 100%.

Group of orthologs #282. Best score 57 bits
Score difference with first non-orthologous sequence - A.thaliana:57 C.trachomatis:57

P56795              	100.00%		O84528              	100.00%
Bootstrap support for P56795 as seed ortholog is 100%.
Bootstrap support for O84528 as seed ortholog is 100%.

Group of orthologs #283. Best score 57 bits
Score difference with first non-orthologous sequence - A.thaliana:57 C.trachomatis:57

P56807              	100.00%		O84808              	100.00%
Bootstrap support for P56807 as seed ortholog is 100%.
Bootstrap support for O84808 as seed ortholog is 100%.

Group of orthologs #284. Best score 56 bits
Score difference with first non-orthologous sequence - A.thaliana:56 C.trachomatis:56

P34893              	100.00%		P0C0Z8              	100.00%
Q8LDC9              	69.29%		
Bootstrap support for P34893 as seed ortholog is 100%.
Bootstrap support for P0C0Z8 as seed ortholog is 100%.

Group of orthologs #285. Best score 56 bits
Score difference with first non-orthologous sequence - A.thaliana:56 C.trachomatis:56

Q9LT09              	100.00%		P0CD86              	100.00%
P92959              	5.86%		
Bootstrap support for Q9LT09 as seed ortholog is 100%.
Bootstrap support for P0CD86 as seed ortholog is 100%.

Group of orthologs #286. Best score 56 bits
Score difference with first non-orthologous sequence - A.thaliana:56 C.trachomatis:56

Q9SEZ6              	100.00%		O84032              	100.00%
Bootstrap support for Q9SEZ6 as seed ortholog is 100%.
Bootstrap support for O84032 as seed ortholog is 100%.

Group of orthologs #287. Best score 56 bits
Score difference with first non-orthologous sequence - A.thaliana:4 C.trachomatis:56

Q9ZVJ5              	100.00%		O84470              	100.00%
Bootstrap support for Q9ZVJ5 as seed ortholog is 54%.
Alternative seed ortholog is F4JTE7 (4 bits away from this cluster)
Bootstrap support for O84470 as seed ortholog is 100%.

Group of orthologs #288. Best score 55 bits
Score difference with first non-orthologous sequence - A.thaliana:55 C.trachomatis:55

Q8LGU7              	100.00%		O84350              	100.00%
Q8L633              	56.09%		
Bootstrap support for Q8LGU7 as seed ortholog is 100%.
Bootstrap support for O84350 as seed ortholog is 100%.

Group of orthologs #289. Best score 55 bits
Score difference with first non-orthologous sequence - A.thaliana:55 C.trachomatis:55

P56805              	100.00%		P66427              	100.00%
Bootstrap support for P56805 as seed ortholog is 100%.
Bootstrap support for P66427 as seed ortholog is 100%.

Group of orthologs #290. Best score 54 bits
Score difference with first non-orthologous sequence - A.thaliana:54 C.trachomatis:54

Q8GXB4              	100.00%		O84584              	100.00%
Q9FL41              	31.91%		
Q9LI65              	28.53%		
Q94AP3              	27.65%		
F4IJ08              	27.50%		
Q9LXX8              	27.06%		
F4HVM3              	26.32%		
Q9M130              	26.03%		
Q9FNA5              	25.59%		
O80638              	25.59%		
Q6NMB7              	25.59%		
Q9LPF1              	25.44%		
F4HZQ7              	24.85%		
Q5XEZ0              	24.85%		
Q501F8              	24.56%		
Q9M129              	24.26%		
Q9FGG3              	24.12%		
Q9M0B8              	23.82%		
Q4PT23              	23.82%		
Q9ZUS1              	23.53%		
Q9M131              	23.09%		
Q9SUF1              	23.09%		
Q500Z4              	22.94%		
F4J9A3              	22.35%		
F4I8W6              	22.21%		
Q9SUD5              	19.41%		
F4IQX1              	18.53%		
Q5PP32              	18.53%		
F4KHA8              	17.94%		
Q94JU2              	17.94%		
F4JK59              	17.06%		
Q9FL08              	16.91%		
Q8VYZ7              	16.76%		
Q945L4              	16.76%		
F4KD68              	16.18%		
F4IYZ0              	16.03%		
Q56X95              	15.74%		
F4I5D5              	15.44%		
Q9FGL0              	12.50%		
F4JMI7              	12.50%		
Q9ZUI8              	12.21%		
F4JRS9              	9.41%		
Bootstrap support for Q8GXB4 as seed ortholog is 100%.
Bootstrap support for O84584 as seed ortholog is 100%.

Group of orthologs #291. Best score 54 bits
Score difference with first non-orthologous sequence - A.thaliana:54 C.trachomatis:54

P11829              	100.00%		O84239              	100.00%
O04652              	55.39%		
P25701              	41.18%		
P25702              	39.22%		
Q9SW21              	29.90%		
Bootstrap support for P11829 as seed ortholog is 100%.
Bootstrap support for O84239 as seed ortholog is 100%.

Group of orthologs #292. Best score 53 bits
Score difference with first non-orthologous sequence - A.thaliana:53 C.trachomatis:53

Q8GY88              	100.00%		O84372              	100.00%
Q9SJ05              	65.87%		
Q9LW20              	12.18%		
Bootstrap support for Q8GY88 as seed ortholog is 100%.
Bootstrap support for O84372 as seed ortholog is 100%.

Group of orthologs #293. Best score 52 bits
Score difference with first non-orthologous sequence - A.thaliana:52 C.trachomatis:52

F4JPA3              	100.00%		O84805              	100.00%
Q9FKZ4              	20.49%		
Bootstrap support for F4JPA3 as seed ortholog is 100%.
Bootstrap support for O84805 as seed ortholog is 100%.

Group of orthologs #294. Best score 50 bits
Score difference with first non-orthologous sequence - A.thaliana:50 C.trachomatis:50

Q8VZN9              	100.00%		O84261              	100.00%
Q8RXV3              	43.02%		
Q8LAY8              	42.73%		
Q4PSE8              	41.72%		
Q94AT1              	36.19%		
Q8L7I4              	22.67%		
Q93YW5              	21.51%		
Q9SIU8              	21.51%		
Q9LME4              	19.33%		
Q9LDA7              	19.33%		
Q9S9Z7              	19.19%		
O64583              	18.60%		
O80871              	17.01%		
Q9XEE8              	16.42%		
Q9FXE4              	16.28%		
P93006              	15.99%		
Q8RX37              	15.99%		
Q9SD02              	15.84%		
Q9LNW3              	15.26%		
P49597              	14.97%		
Q9FIF5              	14.68%		
Q9ZW21              	14.68%		
P49598              	14.53%		
Q3EAF9              	14.39%		
Q9FLI3              	13.95%		
Q9LNP9              	13.37%		
Q9CAJ0              	13.23%		
O04719              	12.94%		
Q9SLA1              	12.94%		
Q9LNF4              	11.34%		
Q9LUU7              	11.34%		
Q9LMT1              	11.05%		
P49599              	10.76%		
O81716              	10.47%		
Q8RXZ4              	10.17%		
Q9SZ53              	10.17%		
Q9M9C6              	9.45%		
Q93YS2              	9.30%		
O80492              	8.14%		
Q9LRZ4              	7.85%		
Q9SUF4              	7.41%		
Q0WRB2              	7.12%		
Q9FX08              	6.98%		
Q0V7V2              	6.83%		
Q9M9W9              	6.69%		
Q9XGZ9              	6.69%		
Q7XJ53              	6.40%		
O82637              	6.25%		
Q6NKS1              	6.25%		
Q84JD5              	6.25%		
Q501F9              	6.10%		
Q94CL8              	6.10%		
Q9LHJ9              	6.10%		
Q9SD12              	5.96%		
Q3EAZ3              	5.96%		
Q9FKX4              	5.96%		
Q5PNS9              	5.81%		
Q9SA22              	5.52%		
Q9M1V8              	5.23%		
Bootstrap support for Q8VZN9 as seed ortholog is 100%.
Bootstrap support for O84261 as seed ortholog is 100%.

Group of orthologs #295. Best score 50 bits
Score difference with first non-orthologous sequence - A.thaliana:50 C.trachomatis:50

Q9ZUS6              	100.00%		O84689              	100.00%
Q8L606              	68.95%		
Q8LEV0              	42.57%		
Q9SF54              	30.72%		
Q9LS48              	19.03%		
Q94A56              	16.86%		
Bootstrap support for Q9ZUS6 as seed ortholog is 100%.
Bootstrap support for O84689 as seed ortholog is 100%.

Group of orthologs #296. Best score 49 bits
Score difference with first non-orthologous sequence - A.thaliana:49 C.trachomatis:49

O80574              	100.00%		O84369              	100.00%
Q8LB01              	83.10%		
Bootstrap support for O80574 as seed ortholog is 100%.
Bootstrap support for O84369 as seed ortholog is 100%.

Group of orthologs #297. Best score 49 bits
Score difference with first non-orthologous sequence - A.thaliana:49 C.trachomatis:49

P49200              	100.00%		P0CE02              	100.00%
Q9STY6              	100.00%		
Bootstrap support for P49200 as seed ortholog is 100%.
Bootstrap support for Q9STY6 as seed ortholog is 100%.
Bootstrap support for P0CE02 as seed ortholog is 100%.

Group of orthologs #298. Best score 49 bits
Score difference with first non-orthologous sequence - A.thaliana:49 C.trachomatis:49

O65693              	100.00%		O84097              	100.00%
Bootstrap support for O65693 as seed ortholog is 100%.
Bootstrap support for O84097 as seed ortholog is 100%.

Group of orthologs #299. Best score 47 bits
Score difference with first non-orthologous sequence - A.thaliana:47 C.trachomatis:47

Q9CAF9              	100.00%		O84774              	100.00%
Bootstrap support for Q9CAF9 as seed ortholog is 100%.
Bootstrap support for O84774 as seed ortholog is 100%.

Group of orthologs #300. Best score 46 bits
Score difference with first non-orthologous sequence - A.thaliana:1 C.trachomatis:46

Q9SN79              	100.00%		O84209              	100.00%
Q9ZUN7              	100.00%		O84151              	7.03%
Q9FXF9              	67.81%		
F4JBL2              	61.96%		
Q24JN1              	45.44%		
Bootstrap support for Q9SN79 as seed ortholog is 55%.
Alternative seed ortholog is Q9M3D0 (1 bits away from this cluster)
Bootstrap support for Q9ZUN7 as seed ortholog is 52%.
Alternative seed ortholog is Q9M3D0 (1 bits away from this cluster)
Bootstrap support for O84209 as seed ortholog is 100%.