###################################
202 groups of orthologs
293 in-paralogs from A.mellifera
206 in-paralogs from C.trachomatis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 897 bits
Score difference with first non-orthologous sequence - A.mellifera:652 C.trachomatis:897

H9K571              	100.00%		O84022              	100.00%
Bootstrap support for H9K571 as seed ortholog is 100%.
Bootstrap support for O84022 as seed ortholog is 100%.

Group of orthologs #2. Best score 839 bits
Score difference with first non-orthologous sequence - A.mellifera:839 C.trachomatis:839

H9K434              	100.00%		O84250              	100.00%
Bootstrap support for H9K434 as seed ortholog is 100%.
Bootstrap support for O84250 as seed ortholog is 100%.

Group of orthologs #3. Best score 698 bits
Score difference with first non-orthologous sequence - A.mellifera:698 C.trachomatis:698

H9KEA5              	100.00%		O84348              	100.00%
Bootstrap support for H9KEA5 as seed ortholog is 100%.
Bootstrap support for O84348 as seed ortholog is 100%.

Group of orthologs #4. Best score 696 bits
Score difference with first non-orthologous sequence - A.mellifera:145 C.trachomatis:696

H9KS60              	100.00%		P17821              	100.00%
Bootstrap support for H9KS60 as seed ortholog is 99%.
Bootstrap support for P17821 as seed ortholog is 100%.

Group of orthologs #5. Best score 620 bits
Score difference with first non-orthologous sequence - A.mellifera:620 C.trachomatis:620

H9KGL3              	100.00%		O84716              	100.00%
Bootstrap support for H9KGL3 as seed ortholog is 100%.
Bootstrap support for O84716 as seed ortholog is 100%.

Group of orthologs #6. Best score 554 bits
Score difference with first non-orthologous sequence - A.mellifera:476 C.trachomatis:369

H9KPL4              	100.00%		P0C0Z7              	100.00%
Bootstrap support for H9KPL4 as seed ortholog is 100%.
Bootstrap support for P0C0Z7 as seed ortholog is 100%.

Group of orthologs #7. Best score 543 bits
Score difference with first non-orthologous sequence - A.mellifera:24 C.trachomatis:543

H9K1F7              	100.00%		O84067              	100.00%
Bootstrap support for H9K1F7 as seed ortholog is 69%.
Alternative seed ortholog is H9KM43 (24 bits away from this cluster)
Bootstrap support for O84067 as seed ortholog is 100%.

Group of orthologs #8. Best score 534 bits
Score difference with first non-orthologous sequence - A.mellifera:367 C.trachomatis:534

H9K1J0              	100.00%		O84304              	100.00%
Bootstrap support for H9K1J0 as seed ortholog is 100%.
Bootstrap support for O84304 as seed ortholog is 100%.

Group of orthologs #9. Best score 518 bits
Score difference with first non-orthologous sequence - A.mellifera:95 C.trachomatis:518

H9KK09              	100.00%		O84444              	100.00%
Bootstrap support for H9KK09 as seed ortholog is 96%.
Bootstrap support for O84444 as seed ortholog is 100%.

Group of orthologs #10. Best score 500 bits
Score difference with first non-orthologous sequence - A.mellifera:500 C.trachomatis:500

H9K6W4              	100.00%		O84057              	100.00%
H9KA04              	23.18%		
Bootstrap support for H9K6W4 as seed ortholog is 100%.
Bootstrap support for O84057 as seed ortholog is 100%.

Group of orthologs #11. Best score 488 bits
Score difference with first non-orthologous sequence - A.mellifera:488 C.trachomatis:488

H9KIP2              	100.00%		O84585              	100.00%
Bootstrap support for H9KIP2 as seed ortholog is 100%.
Bootstrap support for O84585 as seed ortholog is 100%.

Group of orthologs #12. Best score 479 bits
Score difference with first non-orthologous sequence - A.mellifera:479 C.trachomatis:479

H9K760              	100.00%		O84066              	100.00%
Bootstrap support for H9K760 as seed ortholog is 100%.
Bootstrap support for O84066 as seed ortholog is 100%.

Group of orthologs #13. Best score 464 bits
Score difference with first non-orthologous sequence - A.mellifera:464 C.trachomatis:464

H9K3W4              	100.00%		O84754              	100.00%
Bootstrap support for H9K3W4 as seed ortholog is 100%.
Bootstrap support for O84754 as seed ortholog is 100%.

Group of orthologs #14. Best score 458 bits
Score difference with first non-orthologous sequence - A.mellifera:458 C.trachomatis:458

H9K9C6              	100.00%		P0CD73              	100.00%
Bootstrap support for H9K9C6 as seed ortholog is 100%.
Bootstrap support for P0CD73 as seed ortholog is 100%.

Group of orthologs #15. Best score 445 bits
Score difference with first non-orthologous sequence - A.mellifera:445 C.trachomatis:445

H9KK08              	100.00%		Q59321              	100.00%
Bootstrap support for H9KK08 as seed ortholog is 100%.
Bootstrap support for Q59321 as seed ortholog is 100%.

Group of orthologs #16. Best score 437 bits
Score difference with first non-orthologous sequence - A.mellifera:58 C.trachomatis:437

H9KGJ9              	100.00%		O84848              	100.00%
Bootstrap support for H9KGJ9 as seed ortholog is 90%.
Bootstrap support for O84848 as seed ortholog is 100%.

Group of orthologs #17. Best score 428 bits
Score difference with first non-orthologous sequence - A.mellifera:273 C.trachomatis:428

H9KN87              	100.00%		P0CD71              	100.00%
Bootstrap support for H9KN87 as seed ortholog is 100%.
Bootstrap support for P0CD71 as seed ortholog is 100%.

Group of orthologs #18. Best score 412 bits
Score difference with first non-orthologous sequence - A.mellifera:238 C.trachomatis:412

H9KKN6              	100.00%		O84460              	100.00%
Bootstrap support for H9KKN6 as seed ortholog is 100%.
Bootstrap support for O84460 as seed ortholog is 100%.

Group of orthologs #19. Best score 411 bits
Score difference with first non-orthologous sequence - A.mellifera:411 C.trachomatis:411

H9KDL7              	100.00%		O84863              	100.00%
Bootstrap support for H9KDL7 as seed ortholog is 100%.
Bootstrap support for O84863 as seed ortholog is 100%.

Group of orthologs #20. Best score 410 bits
Score difference with first non-orthologous sequence - A.mellifera:410 C.trachomatis:410

H9KLH5              	100.00%		O84849              	100.00%
Bootstrap support for H9KLH5 as seed ortholog is 100%.
Bootstrap support for O84849 as seed ortholog is 100%.

Group of orthologs #21. Best score 401 bits
Score difference with first non-orthologous sequence - A.mellifera:76 C.trachomatis:401

H9KSC4              	100.00%		O84711              	100.00%
Bootstrap support for H9KSC4 as seed ortholog is 99%.
Bootstrap support for O84711 as seed ortholog is 100%.

Group of orthologs #22. Best score 396 bits
Score difference with first non-orthologous sequence - A.mellifera:292 C.trachomatis:396

H9K4X8              	100.00%		O84831              	100.00%
Bootstrap support for H9K4X8 as seed ortholog is 100%.
Bootstrap support for O84831 as seed ortholog is 100%.

Group of orthologs #23. Best score 379 bits
Score difference with first non-orthologous sequence - A.mellifera:266 C.trachomatis:379

H9KND4              	100.00%		O84211              	100.00%
Bootstrap support for H9KND4 as seed ortholog is 99%.
Bootstrap support for O84211 as seed ortholog is 100%.

Group of orthologs #24. Best score 378 bits
Score difference with first non-orthologous sequence - A.mellifera:314 C.trachomatis:378

H9K1F9              	100.00%		O84310              	100.00%
Bootstrap support for H9K1F9 as seed ortholog is 100%.
Bootstrap support for O84310 as seed ortholog is 100%.

Group of orthologs #25. Best score 366 bits
Score difference with first non-orthologous sequence - A.mellifera:137 C.trachomatis:366

H9KCI7              	100.00%		P0CE13              	100.00%
Bootstrap support for H9KCI7 as seed ortholog is 99%.
Bootstrap support for P0CE13 as seed ortholog is 100%.

Group of orthologs #26. Best score 360 bits
Score difference with first non-orthologous sequence - A.mellifera:207 C.trachomatis:360

H9K2A8              	100.00%		O84546              	100.00%
Bootstrap support for H9K2A8 as seed ortholog is 100%.
Bootstrap support for O84546 as seed ortholog is 100%.

Group of orthologs #27. Best score 326 bits
Score difference with first non-orthologous sequence - A.mellifera:326 C.trachomatis:326

H9KMU5              	100.00%		O84823              	100.00%
Bootstrap support for H9KMU5 as seed ortholog is 100%.
Bootstrap support for O84823 as seed ortholog is 100%.

Group of orthologs #28. Best score 322 bits
Score difference with first non-orthologous sequence - A.mellifera:322 C.trachomatis:322

H9K3D6              	100.00%		O84829              	100.00%
Bootstrap support for H9K3D6 as seed ortholog is 100%.
Bootstrap support for O84829 as seed ortholog is 100%.

Group of orthologs #29. Best score 316 bits
Score difference with first non-orthologous sequence - A.mellifera:178 C.trachomatis:316

H9JYP6              	100.00%		O84098              	100.00%
Bootstrap support for H9JYP6 as seed ortholog is 99%.
Bootstrap support for O84098 as seed ortholog is 100%.

Group of orthologs #30. Best score 311 bits
Score difference with first non-orthologous sequence - A.mellifera:311 C.trachomatis:311

H9KGF6              	100.00%		O84775              	100.00%
Bootstrap support for H9KGF6 as seed ortholog is 100%.
Bootstrap support for O84775 as seed ortholog is 100%.

Group of orthologs #31. Best score 309 bits
Score difference with first non-orthologous sequence - A.mellifera:124 C.trachomatis:309

H9KJL4              	100.00%		O84248              	100.00%
H9KMN3              	35.85%		
Bootstrap support for H9KJL4 as seed ortholog is 99%.
Bootstrap support for O84248 as seed ortholog is 100%.

Group of orthologs #32. Best score 307 bits
Score difference with first non-orthologous sequence - A.mellifera:307 C.trachomatis:307

H9K1M9              	100.00%		P0CD78              	100.00%
Bootstrap support for H9K1M9 as seed ortholog is 100%.
Bootstrap support for P0CD78 as seed ortholog is 100%.

Group of orthologs #33. Best score 307 bits
Score difference with first non-orthologous sequence - A.mellifera:224 C.trachomatis:307

H9K6Z6              	100.00%		O84786              	100.00%
Bootstrap support for H9K6Z6 as seed ortholog is 100%.
Bootstrap support for O84786 as seed ortholog is 100%.

Group of orthologs #34. Best score 306 bits
Score difference with first non-orthologous sequence - A.mellifera:306 C.trachomatis:306

H9K0L6              	100.00%		O84036              	100.00%
Bootstrap support for H9K0L6 as seed ortholog is 100%.
Bootstrap support for O84036 as seed ortholog is 100%.

Group of orthologs #35. Best score 299 bits
Score difference with first non-orthologous sequence - A.mellifera:136 C.trachomatis:299

H9KKR1              	100.00%		O84561              	100.00%
H9KHL7              	59.14%		
Bootstrap support for H9KKR1 as seed ortholog is 99%.
Bootstrap support for O84561 as seed ortholog is 100%.

Group of orthologs #36. Best score 297 bits
Score difference with first non-orthologous sequence - A.mellifera:297 C.trachomatis:297

H9K2A6              	100.00%		O84315              	100.00%
Bootstrap support for H9K2A6 as seed ortholog is 100%.
Bootstrap support for O84315 as seed ortholog is 100%.

Group of orthologs #37. Best score 296 bits
Score difference with first non-orthologous sequence - A.mellifera:21 C.trachomatis:296

H9K379              	100.00%		O84289              	100.00%
Bootstrap support for H9K379 as seed ortholog is 69%.
Alternative seed ortholog is H9KB81 (21 bits away from this cluster)
Bootstrap support for O84289 as seed ortholog is 100%.

Group of orthologs #38. Best score 296 bits
Score difference with first non-orthologous sequence - A.mellifera:157 C.trachomatis:296

H9KN66              	100.00%		O84035              	100.00%
Bootstrap support for H9KN66 as seed ortholog is 99%.
Bootstrap support for O84035 as seed ortholog is 100%.

Group of orthologs #39. Best score 291 bits
Score difference with first non-orthologous sequence - A.mellifera:291 C.trachomatis:291

H9KHN0              	100.00%		P0CE09              	100.00%
H9KCM7              	19.27%		
H9KLB3              	5.25%		
Bootstrap support for H9KHN0 as seed ortholog is 100%.
Bootstrap support for P0CE09 as seed ortholog is 100%.

Group of orthologs #40. Best score 290 bits
Score difference with first non-orthologous sequence - A.mellifera:181 C.trachomatis:290

H9K0K8              	100.00%		P0CE21              	100.00%
Bootstrap support for H9K0K8 as seed ortholog is 100%.
Bootstrap support for P0CE21 as seed ortholog is 100%.

Group of orthologs #41. Best score 287 bits
Score difference with first non-orthologous sequence - A.mellifera:223 C.trachomatis:287

H9K668              	100.00%		O84381              	100.00%
H9KNX2              	15.73%		
Bootstrap support for H9K668 as seed ortholog is 100%.
Bootstrap support for O84381 as seed ortholog is 100%.

Group of orthologs #42. Best score 284 bits
Score difference with first non-orthologous sequence - A.mellifera:284 C.trachomatis:284

H9K8R2              	100.00%		O84465              	100.00%
Bootstrap support for H9K8R2 as seed ortholog is 100%.
Bootstrap support for O84465 as seed ortholog is 100%.

Group of orthologs #43. Best score 274 bits
Score difference with first non-orthologous sequence - A.mellifera:139 C.trachomatis:274

H9KL10              	100.00%		O84006              	100.00%
Bootstrap support for H9KL10 as seed ortholog is 99%.
Bootstrap support for O84006 as seed ortholog is 100%.

Group of orthologs #44. Best score 270 bits
Score difference with first non-orthologous sequence - A.mellifera:19 C.trachomatis:270

H9K1D9              	100.00%		O84797              	100.00%
Bootstrap support for H9K1D9 as seed ortholog is 65%.
Alternative seed ortholog is H9K2T8 (19 bits away from this cluster)
Bootstrap support for O84797 as seed ortholog is 100%.

Group of orthologs #45. Best score 269 bits
Score difference with first non-orthologous sequence - A.mellifera:269 C.trachomatis:269

H9K8V6              	100.00%		O84828              	100.00%
H9JZT2              	46.67%		
Bootstrap support for H9K8V6 as seed ortholog is 100%.
Bootstrap support for O84828 as seed ortholog is 100%.

Group of orthologs #46. Best score 267 bits
Score difference with first non-orthologous sequence - A.mellifera:267 C.trachomatis:267

H9K238              	100.00%		O84591              	100.00%
H9KD79              	16.08%		
Bootstrap support for H9K238 as seed ortholog is 100%.
Bootstrap support for O84591 as seed ortholog is 100%.

Group of orthologs #47. Best score 263 bits
Score difference with first non-orthologous sequence - A.mellifera:263 C.trachomatis:263

H9K925              	100.00%		O84698              	100.00%
Bootstrap support for H9K925 as seed ortholog is 100%.
Bootstrap support for O84698 as seed ortholog is 100%.

Group of orthologs #48. Best score 262 bits
Score difference with first non-orthologous sequence - A.mellifera:262 C.trachomatis:262

H9KBM2              	100.00%		O84439              	100.00%
Bootstrap support for H9KBM2 as seed ortholog is 100%.
Bootstrap support for O84439 as seed ortholog is 100%.

Group of orthologs #49. Best score 260 bits
Score difference with first non-orthologous sequence - A.mellifera:260 C.trachomatis:260

H9KH96              	100.00%		P0CD72              	100.00%
Bootstrap support for H9KH96 as seed ortholog is 100%.
Bootstrap support for P0CD72 as seed ortholog is 100%.

Group of orthologs #50. Best score 260 bits
Score difference with first non-orthologous sequence - A.mellifera:89 C.trachomatis:260

H9KRQ7              	100.00%		O84787              	100.00%
Bootstrap support for H9KRQ7 as seed ortholog is 96%.
Bootstrap support for O84787 as seed ortholog is 100%.

Group of orthologs #51. Best score 255 bits
Score difference with first non-orthologous sequence - A.mellifera:255 C.trachomatis:255

H9KIU3              	100.00%		O84316              	100.00%
H9KJB9              	17.15%		
H9K664              	10.39%		
Bootstrap support for H9KIU3 as seed ortholog is 100%.
Bootstrap support for O84316 as seed ortholog is 100%.

Group of orthologs #52. Best score 255 bits
Score difference with first non-orthologous sequence - A.mellifera:182 C.trachomatis:255

H9KQ68              	100.00%		O84309              	100.00%
Bootstrap support for H9KQ68 as seed ortholog is 100%.
Bootstrap support for O84309 as seed ortholog is 100%.

Group of orthologs #53. Best score 248 bits
Score difference with first non-orthologous sequence - A.mellifera:144 C.trachomatis:248

H9KKG9              	100.00%		O84352              	100.00%
H9K704              	13.99%		
H9KPI3              	13.48%		
Bootstrap support for H9KKG9 as seed ortholog is 99%.
Bootstrap support for O84352 as seed ortholog is 100%.

Group of orthologs #54. Best score 248 bits
Score difference with first non-orthologous sequence - A.mellifera:248 C.trachomatis:248

H9K155              	100.00%		O84297              	100.00%
Bootstrap support for H9K155 as seed ortholog is 100%.
Bootstrap support for O84297 as seed ortholog is 100%.

Group of orthologs #55. Best score 243 bits
Score difference with first non-orthologous sequence - A.mellifera:97 C.trachomatis:243

H9JZX5              	100.00%		O84642              	100.00%
Bootstrap support for H9JZX5 as seed ortholog is 99%.
Bootstrap support for O84642 as seed ortholog is 100%.

Group of orthologs #56. Best score 243 bits
Score difference with first non-orthologous sequence - A.mellifera:243 C.trachomatis:243

H9KHH3              	100.00%		O84451              	100.00%
Bootstrap support for H9KHH3 as seed ortholog is 100%.
Bootstrap support for O84451 as seed ortholog is 100%.

Group of orthologs #57. Best score 240 bits
Score difference with first non-orthologous sequence - A.mellifera:117 C.trachomatis:63

H9K7I8              	100.00%		O84058              	100.00%
Bootstrap support for H9K7I8 as seed ortholog is 99%.
Bootstrap support for O84058 as seed ortholog is 99%.

Group of orthologs #58. Best score 240 bits
Score difference with first non-orthologous sequence - A.mellifera:240 C.trachomatis:240

H9KI52              	100.00%		O84562              	100.00%
Bootstrap support for H9KI52 as seed ortholog is 100%.
Bootstrap support for O84562 as seed ortholog is 100%.

Group of orthologs #59. Best score 235 bits
Score difference with first non-orthologous sequence - A.mellifera:235 C.trachomatis:235

H9KD63              	100.00%		O84360              	100.00%
Bootstrap support for H9KD63 as seed ortholog is 100%.
Bootstrap support for O84360 as seed ortholog is 100%.

Group of orthologs #60. Best score 228 bits
Score difference with first non-orthologous sequence - A.mellifera:26 C.trachomatis:228

H9K1R7              	100.00%		O84081              	100.00%
Bootstrap support for H9K1R7 as seed ortholog is 78%.
Bootstrap support for O84081 as seed ortholog is 100%.

Group of orthologs #61. Best score 228 bits
Score difference with first non-orthologous sequence - A.mellifera:88 C.trachomatis:228

H9KB85              	100.00%		O84296              	100.00%
Bootstrap support for H9KB85 as seed ortholog is 99%.
Bootstrap support for O84296 as seed ortholog is 100%.

Group of orthologs #62. Best score 228 bits
Score difference with first non-orthologous sequence - A.mellifera:119 C.trachomatis:79

H9KUB2              	100.00%		O84249              	100.00%
Bootstrap support for H9KUB2 as seed ortholog is 99%.
Bootstrap support for O84249 as seed ortholog is 96%.

Group of orthologs #63. Best score 227 bits
Score difference with first non-orthologous sequence - A.mellifera:227 C.trachomatis:227

H9KFU2              	100.00%		O84065              	100.00%
Bootstrap support for H9KFU2 as seed ortholog is 100%.
Bootstrap support for O84065 as seed ortholog is 100%.

Group of orthologs #64. Best score 225 bits
Score difference with first non-orthologous sequence - A.mellifera:225 C.trachomatis:225

H9KJ70              	100.00%		O84638              	100.00%
Bootstrap support for H9KJ70 as seed ortholog is 100%.
Bootstrap support for O84638 as seed ortholog is 100%.

Group of orthologs #65. Best score 223 bits
Score difference with first non-orthologous sequence - A.mellifera:94 C.trachomatis:223

H9JZ69              	100.00%		O84732              	100.00%
Bootstrap support for H9JZ69 as seed ortholog is 97%.
Bootstrap support for O84732 as seed ortholog is 100%.

Group of orthologs #66. Best score 221 bits
Score difference with first non-orthologous sequence - A.mellifera:52 C.trachomatis:221

H9K6R7              	100.00%		O84734              	100.00%
Bootstrap support for H9K6R7 as seed ortholog is 90%.
Bootstrap support for O84734 as seed ortholog is 100%.

Group of orthologs #67. Best score 220 bits
Score difference with first non-orthologous sequence - A.mellifera:220 C.trachomatis:220

H9KN50              	100.00%		P36431              	100.00%
Bootstrap support for H9KN50 as seed ortholog is 100%.
Bootstrap support for P36431 as seed ortholog is 100%.

Group of orthologs #68. Best score 212 bits
Score difference with first non-orthologous sequence - A.mellifera:212 C.trachomatis:212

H9K4H4              	100.00%		O84266              	100.00%
H9K090              	16.62%		
Bootstrap support for H9K4H4 as seed ortholog is 100%.
Bootstrap support for O84266 as seed ortholog is 100%.

Group of orthologs #69. Best score 212 bits
Score difference with first non-orthologous sequence - A.mellifera:212 C.trachomatis:75

H9K0X2              	100.00%		O84712              	100.00%
Bootstrap support for H9K0X2 as seed ortholog is 100%.
Bootstrap support for O84712 as seed ortholog is 99%.

Group of orthologs #70. Best score 212 bits
Score difference with first non-orthologous sequence - A.mellifera:212 C.trachomatis:212

H9KLE7              	100.00%		O84026              	100.00%
Bootstrap support for H9KLE7 as seed ortholog is 100%.
Bootstrap support for O84026 as seed ortholog is 100%.

Group of orthologs #71. Best score 210 bits
Score difference with first non-orthologous sequence - A.mellifera:210 C.trachomatis:210

H9KR35              	100.00%		O84812              	100.00%
H9KS63              	9.49%		
Bootstrap support for H9KR35 as seed ortholog is 100%.
Bootstrap support for O84812 as seed ortholog is 100%.

Group of orthologs #72. Best score 210 bits
Score difference with first non-orthologous sequence - A.mellifera:134 C.trachomatis:210

H9KGT3              	100.00%		O84196              	100.00%
Bootstrap support for H9KGT3 as seed ortholog is 99%.
Bootstrap support for O84196 as seed ortholog is 100%.

Group of orthologs #73. Best score 210 bits
Score difference with first non-orthologous sequence - A.mellifera:103 C.trachomatis:210

H9KUI9              	100.00%		O84049              	100.00%
Bootstrap support for H9KUI9 as seed ortholog is 99%.
Bootstrap support for O84049 as seed ortholog is 100%.

Group of orthologs #74. Best score 205 bits
Score difference with first non-orthologous sequence - A.mellifera:205 C.trachomatis:205

H9KK70              	100.00%		O84596              	100.00%
Bootstrap support for H9KK70 as seed ortholog is 100%.
Bootstrap support for O84596 as seed ortholog is 100%.

Group of orthologs #75. Best score 204 bits
Score difference with first non-orthologous sequence - A.mellifera:36 C.trachomatis:70

H9K820              	100.00%		O84406              	100.00%
H9KIN5              	25.95%		
H9KFA0              	15.70%		
Q9XZJ1              	14.30%		
H9K3B0              	10.58%		
Bootstrap support for H9K820 as seed ortholog is 79%.
Bootstrap support for O84406 as seed ortholog is 99%.

Group of orthologs #76. Best score 203 bits
Score difference with first non-orthologous sequence - A.mellifera:203 C.trachomatis:203

H9K9B8              	100.00%		O84796              	100.00%
Bootstrap support for H9K9B8 as seed ortholog is 100%.
Bootstrap support for O84796 as seed ortholog is 100%.

Group of orthologs #77. Best score 203 bits
Score difference with first non-orthologous sequence - A.mellifera:50 C.trachomatis:136

H9KP84              	100.00%		O84704              	100.00%
Bootstrap support for H9KP84 as seed ortholog is 89%.
Bootstrap support for O84704 as seed ortholog is 99%.

Group of orthologs #78. Best score 193 bits
Score difference with first non-orthologous sequence - A.mellifera:88 C.trachomatis:193

H9KUT2              	100.00%		O84028              	100.00%
Bootstrap support for H9KUT2 as seed ortholog is 99%.
Bootstrap support for O84028 as seed ortholog is 100%.

Group of orthologs #79. Best score 192 bits
Score difference with first non-orthologous sequence - A.mellifera:31 C.trachomatis:192

H9K116              	100.00%		O84345              	100.00%
Bootstrap support for H9K116 as seed ortholog is 90%.
Bootstrap support for O84345 as seed ortholog is 100%.

Group of orthologs #80. Best score 191 bits
Score difference with first non-orthologous sequence - A.mellifera:191 C.trachomatis:191

H9KMQ4              	100.00%		O84859              	100.00%
Bootstrap support for H9KMQ4 as seed ortholog is 100%.
Bootstrap support for O84859 as seed ortholog is 100%.

Group of orthologs #81. Best score 189 bits
Score difference with first non-orthologous sequence - A.mellifera:82 C.trachomatis:189

H9KQT0              	100.00%		O84608              	100.00%
H9K1E1              	36.19%		
Bootstrap support for H9KQT0 as seed ortholog is 99%.
Bootstrap support for O84608 as seed ortholog is 100%.

Group of orthologs #82. Best score 188 bits
Score difference with first non-orthologous sequence - A.mellifera:82 C.trachomatis:188

H9KHB0              	100.00%		O84247              	100.00%
Bootstrap support for H9KHB0 as seed ortholog is 99%.
Bootstrap support for O84247 as seed ortholog is 100%.

Group of orthologs #83. Best score 178 bits
Score difference with first non-orthologous sequence - A.mellifera:178 C.trachomatis:178

H9KNG1              	100.00%		O84402              	100.00%
H9K4Z1              	6.25%		
Bootstrap support for H9KNG1 as seed ortholog is 100%.
Bootstrap support for O84402 as seed ortholog is 100%.

Group of orthologs #84. Best score 178 bits
Score difference with first non-orthologous sequence - A.mellifera:45 C.trachomatis:134

H9KKI0              	100.00%		P38004              	100.00%
Bootstrap support for H9KKI0 as seed ortholog is 94%.
Bootstrap support for P38004 as seed ortholog is 99%.

Group of orthologs #85. Best score 176 bits
Score difference with first non-orthologous sequence - A.mellifera:176 C.trachomatis:176

H9KEC4              	100.00%		O84234              	100.00%
H9K2G4              	81.78%		
H9KQS2              	33.19%		
Q6TLC7              	31.07%		
H9KME5              	26.76%		
H9KQ80              	26.06%		
H9KB09              	20.95%		
H9KBM9              	20.42%		
H9KKK2              	20.07%		
H9KTB9              	17.69%		
H9KM63              	16.90%		
H9KTB7              	16.29%		
H9KDE3              	16.11%		
H9K824              	13.82%		
Bootstrap support for H9KEC4 as seed ortholog is 100%.
Bootstrap support for O84234 as seed ortholog is 100%.

Group of orthologs #86. Best score 173 bits
Score difference with first non-orthologous sequence - A.mellifera:37 C.trachomatis:173

H9K918              	100.00%		O84676              	100.00%
                    	       		O84722              	11.18%
Bootstrap support for H9K918 as seed ortholog is 83%.
Bootstrap support for O84676 as seed ortholog is 100%.

Group of orthologs #87. Best score 171 bits
Score difference with first non-orthologous sequence - A.mellifera:171 C.trachomatis:74

H9KEX1              	100.00%		O84755              	100.00%
Bootstrap support for H9KEX1 as seed ortholog is 100%.
Bootstrap support for O84755 as seed ortholog is 88%.

Group of orthologs #88. Best score 171 bits
Score difference with first non-orthologous sequence - A.mellifera:171 C.trachomatis:171

H9KMQ7              	100.00%		O84007              	100.00%
Bootstrap support for H9KMQ7 as seed ortholog is 100%.
Bootstrap support for O84007 as seed ortholog is 100%.

Group of orthologs #89. Best score 166 bits
Score difference with first non-orthologous sequence - A.mellifera:166 C.trachomatis:166

H9KR88              	100.00%		O84423              	100.00%
Bootstrap support for H9KR88 as seed ortholog is 100%.
Bootstrap support for O84423 as seed ortholog is 100%.

Group of orthologs #90. Best score 161 bits
Score difference with first non-orthologous sequence - A.mellifera:161 C.trachomatis:111

H9K515              	100.00%		O84536              	100.00%
Bootstrap support for H9K515 as seed ortholog is 100%.
Bootstrap support for O84536 as seed ortholog is 99%.

Group of orthologs #91. Best score 161 bits
Score difference with first non-orthologous sequence - A.mellifera:161 C.trachomatis:161

H9K8P1              	100.00%		O84720              	100.00%
Bootstrap support for H9K8P1 as seed ortholog is 100%.
Bootstrap support for O84720 as seed ortholog is 100%.

Group of orthologs #92. Best score 160 bits
Score difference with first non-orthologous sequence - A.mellifera:160 C.trachomatis:160

H9KJS5              	100.00%		O84404              	100.00%
Bootstrap support for H9KJS5 as seed ortholog is 100%.
Bootstrap support for O84404 as seed ortholog is 100%.

Group of orthologs #93. Best score 151 bits
Score difference with first non-orthologous sequence - A.mellifera:151 C.trachomatis:151

H9KBE4              	100.00%		O84456              	100.00%
Bootstrap support for H9KBE4 as seed ortholog is 100%.
Bootstrap support for O84456 as seed ortholog is 100%.

Group of orthologs #94. Best score 149 bits
Score difference with first non-orthologous sequence - A.mellifera:149 C.trachomatis:149

H9KKA4              	100.00%		O84332              	100.00%
Bootstrap support for H9KKA4 as seed ortholog is 100%.
Bootstrap support for O84332 as seed ortholog is 100%.

Group of orthologs #95. Best score 147 bits
Score difference with first non-orthologous sequence - A.mellifera:147 C.trachomatis:147

H9KQJ8              	100.00%		O84840              	100.00%
Bootstrap support for H9KQJ8 as seed ortholog is 100%.
Bootstrap support for O84840 as seed ortholog is 100%.

Group of orthologs #96. Best score 144 bits
Score difference with first non-orthologous sequence - A.mellifera:144 C.trachomatis:144

H9KD95              	100.00%		O84727              	100.00%
Bootstrap support for H9KD95 as seed ortholog is 100%.
Bootstrap support for O84727 as seed ortholog is 100%.

Group of orthologs #97. Best score 141 bits
Score difference with first non-orthologous sequence - A.mellifera:141 C.trachomatis:28

H9K0U2              	100.00%		O84260              	100.00%
Bootstrap support for H9K0U2 as seed ortholog is 100%.
Bootstrap support for O84260 as seed ortholog is 74%.
Alternative seed ortholog is O84693 (28 bits away from this cluster)

Group of orthologs #98. Best score 136 bits
Score difference with first non-orthologous sequence - A.mellifera:136 C.trachomatis:136

H9KJ08              	100.00%		O84864              	100.00%
H9KR50              	40.38%		
H9K3U2              	32.77%		
H9KHM8              	32.67%		
H9KH53              	26.15%		
Bootstrap support for H9KJ08 as seed ortholog is 100%.
Bootstrap support for O84864 as seed ortholog is 100%.

Group of orthologs #99. Best score 135 bits
Score difference with first non-orthologous sequence - A.mellifera:135 C.trachomatis:135

H9K684              	100.00%		O84548              	100.00%
Bootstrap support for H9K684 as seed ortholog is 100%.
Bootstrap support for O84548 as seed ortholog is 100%.

Group of orthologs #100. Best score 134 bits
Score difference with first non-orthologous sequence - A.mellifera:134 C.trachomatis:134

H9KJ78              	100.00%		O84033              	100.00%
Bootstrap support for H9KJ78 as seed ortholog is 100%.
Bootstrap support for O84033 as seed ortholog is 100%.

Group of orthologs #101. Best score 133 bits
Score difference with first non-orthologous sequence - A.mellifera:133 C.trachomatis:133

H9K4U5              	100.00%		O84649              	100.00%
H9K0I5              	12.79%		
Bootstrap support for H9K4U5 as seed ortholog is 100%.
Bootstrap support for O84649 as seed ortholog is 100%.

Group of orthologs #102. Best score 126 bits
Score difference with first non-orthologous sequence - A.mellifera:126 C.trachomatis:126

H9KP87              	100.00%		O84274              	100.00%
Bootstrap support for H9KP87 as seed ortholog is 100%.
Bootstrap support for O84274 as seed ortholog is 100%.

Group of orthologs #103. Best score 125 bits
Score difference with first non-orthologous sequence - A.mellifera:74 C.trachomatis:125

H9K6H2              	100.00%		O84589              	100.00%
Bootstrap support for H9K6H2 as seed ortholog is 97%.
Bootstrap support for O84589 as seed ortholog is 100%.

Group of orthologs #104. Best score 124 bits
Score difference with first non-orthologous sequence - A.mellifera:124 C.trachomatis:124

H9KFW2              	100.00%		O84492              	100.00%
Bootstrap support for H9KFW2 as seed ortholog is 100%.
Bootstrap support for O84492 as seed ortholog is 100%.

Group of orthologs #105. Best score 121 bits
Score difference with first non-orthologous sequence - A.mellifera:121 C.trachomatis:121

H9K8J3              	100.00%		O84835              	100.00%
Bootstrap support for H9K8J3 as seed ortholog is 100%.
Bootstrap support for O84835 as seed ortholog is 100%.

Group of orthologs #106. Best score 116 bits
Score difference with first non-orthologous sequence - A.mellifera:116 C.trachomatis:116

H9KAQ5              	100.00%		O84579              	100.00%
Bootstrap support for H9KAQ5 as seed ortholog is 100%.
Bootstrap support for O84579 as seed ortholog is 100%.

Group of orthologs #107. Best score 115 bits
Score difference with first non-orthologous sequence - A.mellifera:49 C.trachomatis:4

H9KHF7              	100.00%		O84205              	100.00%
                    	       		O84695              	7.57%
Bootstrap support for H9KHF7 as seed ortholog is 93%.
Bootstrap support for O84205 as seed ortholog is 54%.
Alternative seed ortholog is O84132 (4 bits away from this cluster)

Group of orthologs #108. Best score 112 bits
Score difference with first non-orthologous sequence - A.mellifera:112 C.trachomatis:112

H9K534              	100.00%		O84200              	100.00%
Bootstrap support for H9K534 as seed ortholog is 100%.
Bootstrap support for O84200 as seed ortholog is 100%.

Group of orthologs #109. Best score 111 bits
Score difference with first non-orthologous sequence - A.mellifera:111 C.trachomatis:111

H9KC97              	100.00%		P55137              	100.00%
Bootstrap support for H9KC97 as seed ortholog is 100%.
Bootstrap support for P55137 as seed ortholog is 100%.

Group of orthologs #110. Best score 111 bits
Score difference with first non-orthologous sequence - A.mellifera:23 C.trachomatis:111

H9KK22              	100.00%		O84130              	100.00%
Bootstrap support for H9KK22 as seed ortholog is 73%.
Alternative seed ortholog is H9K3Q2 (23 bits away from this cluster)
Bootstrap support for O84130 as seed ortholog is 100%.

Group of orthologs #111. Best score 110 bits
Score difference with first non-orthologous sequence - A.mellifera:110 C.trachomatis:110

H9K474              	100.00%		O84458              	100.00%
Bootstrap support for H9K474 as seed ortholog is 100%.
Bootstrap support for O84458 as seed ortholog is 100%.

Group of orthologs #112. Best score 110 bits
Score difference with first non-orthologous sequence - A.mellifera:36 C.trachomatis:110

H9KJM7              	100.00%		O84508              	100.00%
Bootstrap support for H9KJM7 as seed ortholog is 93%.
Bootstrap support for O84508 as seed ortholog is 100%.

Group of orthologs #113. Best score 109 bits
Score difference with first non-orthologous sequence - A.mellifera:109 C.trachomatis:109

H9KQZ5              	100.00%		O84442              	100.00%
Q5FAN1              	10.76%		
H9KKF8              	9.51%		
Bootstrap support for H9KQZ5 as seed ortholog is 100%.
Bootstrap support for O84442 as seed ortholog is 100%.

Group of orthologs #114. Best score 108 bits
Score difference with first non-orthologous sequence - A.mellifera:108 C.trachomatis:108

H9K7Q3              	100.00%		O84752              	100.00%
Bootstrap support for H9K7Q3 as seed ortholog is 100%.
Bootstrap support for O84752 as seed ortholog is 100%.

Group of orthologs #115. Best score 106 bits
Score difference with first non-orthologous sequence - A.mellifera:106 C.trachomatis:106

H9KJ62              	100.00%		O84599              	100.00%
H9JYV7              	5.21%		
Bootstrap support for H9KJ62 as seed ortholog is 100%.
Bootstrap support for O84599 as seed ortholog is 100%.

Group of orthologs #116. Best score 104 bits
Score difference with first non-orthologous sequence - A.mellifera:45 C.trachomatis:104

H9KFT6              	100.00%		O84128              	100.00%
Bootstrap support for H9KFT6 as seed ortholog is 97%.
Bootstrap support for O84128 as seed ortholog is 100%.

Group of orthologs #117. Best score 103 bits
Score difference with first non-orthologous sequence - A.mellifera:103 C.trachomatis:103

H9K103              	100.00%		O84510              	100.00%
Bootstrap support for H9K103 as seed ortholog is 100%.
Bootstrap support for O84510 as seed ortholog is 100%.

Group of orthologs #118. Best score 102 bits
Score difference with first non-orthologous sequence - A.mellifera:102 C.trachomatis:102

H9KD83              	100.00%		O84478              	100.00%
Bootstrap support for H9KD83 as seed ortholog is 100%.
Bootstrap support for O84478 as seed ortholog is 100%.

Group of orthologs #119. Best score 102 bits
Score difference with first non-orthologous sequence - A.mellifera:102 C.trachomatis:102

H9KLI1              	100.00%		O84241              	100.00%
Bootstrap support for H9KLI1 as seed ortholog is 100%.
Bootstrap support for O84241 as seed ortholog is 100%.

Group of orthologs #120. Best score 101 bits
Score difference with first non-orthologous sequence - A.mellifera:101 C.trachomatis:101

H9K2P4              	100.00%		O84131              	100.00%
Bootstrap support for H9K2P4 as seed ortholog is 100%.
Bootstrap support for O84131 as seed ortholog is 100%.

Group of orthologs #121. Best score 101 bits
Score difference with first non-orthologous sequence - A.mellifera:101 C.trachomatis:101

H9KFM7              	100.00%		O84369              	100.00%
Bootstrap support for H9KFM7 as seed ortholog is 100%.
Bootstrap support for O84369 as seed ortholog is 100%.

Group of orthologs #122. Best score 100 bits
Score difference with first non-orthologous sequence - A.mellifera:100 C.trachomatis:100

H9K907              	100.00%		O84686              	100.00%
Bootstrap support for H9K907 as seed ortholog is 100%.
Bootstrap support for O84686 as seed ortholog is 100%.

Group of orthologs #123. Best score 99 bits
Score difference with first non-orthologous sequence - A.mellifera:46 C.trachomatis:99

H9K042              	100.00%		P66370              	100.00%
Bootstrap support for H9K042 as seed ortholog is 98%.
Bootstrap support for P66370 as seed ortholog is 100%.

Group of orthologs #124. Best score 99 bits
Score difference with first non-orthologous sequence - A.mellifera:2 C.trachomatis:99

H9KC16              	100.00%		O84843              	100.00%
Bootstrap support for H9KC16 as seed ortholog is 48%.
Alternative seed ortholog is H9K7W0 (2 bits away from this cluster)
Bootstrap support for O84843 as seed ortholog is 100%.

Group of orthologs #125. Best score 98 bits
Score difference with first non-orthologous sequence - A.mellifera:98 C.trachomatis:98

H9JZF0              	100.00%		O84771              	100.00%
Bootstrap support for H9JZF0 as seed ortholog is 100%.
Bootstrap support for O84771 as seed ortholog is 100%.

Group of orthologs #126. Best score 98 bits
Score difference with first non-orthologous sequence - A.mellifera:52 C.trachomatis:98

H9KEV4              	100.00%		P0CE06              	100.00%
Bootstrap support for H9KEV4 as seed ortholog is 97%.
Bootstrap support for P0CE06 as seed ortholog is 100%.

Group of orthologs #127. Best score 98 bits
Score difference with first non-orthologous sequence - A.mellifera:7 C.trachomatis:98

H9KSB2              	100.00%		O84358              	100.00%
Bootstrap support for H9KSB2 as seed ortholog is 56%.
Alternative seed ortholog is H9K0T4 (7 bits away from this cluster)
Bootstrap support for O84358 as seed ortholog is 100%.

Group of orthologs #128. Best score 97 bits
Score difference with first non-orthologous sequence - A.mellifera:97 C.trachomatis:97

H9KF58              	100.00%		O84301              	100.00%
Bootstrap support for H9KF58 as seed ortholog is 100%.
Bootstrap support for O84301 as seed ortholog is 100%.

Group of orthologs #129. Best score 96 bits
Score difference with first non-orthologous sequence - A.mellifera:96 C.trachomatis:96

H9KNG5              	100.00%		O84435              	100.00%
Bootstrap support for H9KNG5 as seed ortholog is 100%.
Bootstrap support for O84435 as seed ortholog is 100%.

Group of orthologs #130. Best score 95 bits
Score difference with first non-orthologous sequence - A.mellifera:95 C.trachomatis:95

H9JZ17              	100.00%		O84687              	100.00%
Bootstrap support for H9JZ17 as seed ortholog is 100%.
Bootstrap support for O84687 as seed ortholog is 100%.

Group of orthologs #131. Best score 95 bits
Score difference with first non-orthologous sequence - A.mellifera:48 C.trachomatis:95

H9KMZ3              	100.00%		O84390              	100.00%
Bootstrap support for H9KMZ3 as seed ortholog is 99%.
Bootstrap support for O84390 as seed ortholog is 100%.

Group of orthologs #132. Best score 94 bits
Score difference with first non-orthologous sequence - A.mellifera:94 C.trachomatis:94

H9K2B2              	100.00%		O84578              	100.00%
Bootstrap support for H9K2B2 as seed ortholog is 100%.
Bootstrap support for O84578 as seed ortholog is 100%.

Group of orthologs #133. Best score 94 bits
Score difference with first non-orthologous sequence - A.mellifera:11 C.trachomatis:94

H9KKR4              	100.00%		O84530              	100.00%
Bootstrap support for H9KKR4 as seed ortholog is 62%.
Alternative seed ortholog is H9KCY0 (11 bits away from this cluster)
Bootstrap support for O84530 as seed ortholog is 100%.

Group of orthologs #134. Best score 92 bits
Score difference with first non-orthologous sequence - A.mellifera:92 C.trachomatis:92

H9KQB4              	100.00%		O84782              	100.00%
H9K233              	13.45%		
Bootstrap support for H9KQB4 as seed ortholog is 100%.
Bootstrap support for O84782 as seed ortholog is 100%.

Group of orthologs #135. Best score 89 bits
Score difference with first non-orthologous sequence - A.mellifera:89 C.trachomatis:89

H9KNI9              	100.00%		P0CD79              	100.00%
Bootstrap support for H9KNI9 as seed ortholog is 100%.
Bootstrap support for P0CD79 as seed ortholog is 100%.

Group of orthologs #136. Best score 89 bits
Score difference with first non-orthologous sequence - A.mellifera:89 C.trachomatis:89

H9KRU6              	100.00%		O84535              	100.00%
Bootstrap support for H9KRU6 as seed ortholog is 100%.
Bootstrap support for O84535 as seed ortholog is 100%.

Group of orthologs #137. Best score 89 bits
Score difference with first non-orthologous sequence - A.mellifera:89 C.trachomatis:89

H9KSX6              	100.00%		O84391              	100.00%
Bootstrap support for H9KSX6 as seed ortholog is 100%.
Bootstrap support for O84391 as seed ortholog is 100%.

Group of orthologs #138. Best score 87 bits
Score difference with first non-orthologous sequence - A.mellifera:87 C.trachomatis:87

H9KCM1              	100.00%		O84595              	100.00%
H9KKH4              	41.52%		
Bootstrap support for H9KCM1 as seed ortholog is 100%.
Bootstrap support for O84595 as seed ortholog is 100%.

Group of orthologs #139. Best score 85 bits
Score difference with first non-orthologous sequence - A.mellifera:85 C.trachomatis:85

H9K998              	100.00%		O84650              	100.00%
H9K7I2              	8.54%		
Bootstrap support for H9K998 as seed ortholog is 100%.
Bootstrap support for O84650 as seed ortholog is 100%.

Group of orthologs #140. Best score 84 bits
Score difference with first non-orthologous sequence - A.mellifera:84 C.trachomatis:84

H9JZ32              	100.00%		O84750              	100.00%
Bootstrap support for H9JZ32 as seed ortholog is 100%.
Bootstrap support for O84750 as seed ortholog is 100%.

Group of orthologs #141. Best score 84 bits
Score difference with first non-orthologous sequence - A.mellifera:5 C.trachomatis:84

H9KKD5              	100.00%		O84544              	100.00%
Bootstrap support for H9KKD5 as seed ortholog is 60%.
Alternative seed ortholog is H9KFL4 (5 bits away from this cluster)
Bootstrap support for O84544 as seed ortholog is 100%.

Group of orthologs #142. Best score 83 bits
Score difference with first non-orthologous sequence - A.mellifera:83 C.trachomatis:83

H9KMI3              	100.00%		O84658              	100.00%
Bootstrap support for H9KMI3 as seed ortholog is 100%.
Bootstrap support for O84658 as seed ortholog is 100%.

Group of orthologs #143. Best score 83 bits
Score difference with first non-orthologous sequence - A.mellifera:83 C.trachomatis:83

H9KS68              	100.00%		O84294              	100.00%
Bootstrap support for H9KS68 as seed ortholog is 100%.
Bootstrap support for O84294 as seed ortholog is 100%.

Group of orthologs #144. Best score 82 bits
Score difference with first non-orthologous sequence - A.mellifera:82 C.trachomatis:82

H9K3X7              	100.00%		O84307              	100.00%
H9KDG5              	27.42%		
Bootstrap support for H9K3X7 as seed ortholog is 100%.
Bootstrap support for O84307 as seed ortholog is 100%.

Group of orthologs #145. Best score 81 bits
Score difference with first non-orthologous sequence - A.mellifera:81 C.trachomatis:81

H9K429              	100.00%		O84499              	100.00%
Bootstrap support for H9K429 as seed ortholog is 100%.
Bootstrap support for O84499 as seed ortholog is 100%.

Group of orthologs #146. Best score 81 bits
Score difference with first non-orthologous sequence - A.mellifera:7 C.trachomatis:81

H9KDY3              	100.00%		O84469              	100.00%
Bootstrap support for H9KDY3 as seed ortholog is 55%.
Alternative seed ortholog is H9KIB3 (7 bits away from this cluster)
Bootstrap support for O84469 as seed ortholog is 100%.

Group of orthologs #147. Best score 80 bits
Score difference with first non-orthologous sequence - A.mellifera:80 C.trachomatis:80

H9K046              	100.00%		O84357              	100.00%
Bootstrap support for H9K046 as seed ortholog is 100%.
Bootstrap support for O84357 as seed ortholog is 100%.

Group of orthologs #148. Best score 78 bits
Score difference with first non-orthologous sequence - A.mellifera:78 C.trachomatis:78

H9K9K1              	100.00%		O84533              	100.00%
Bootstrap support for H9K9K1 as seed ortholog is 100%.
Bootstrap support for O84533 as seed ortholog is 100%.

Group of orthologs #149. Best score 78 bits
Score difference with first non-orthologous sequence - A.mellifera:78 C.trachomatis:78

H9KHI8              	100.00%		O84027              	100.00%
Bootstrap support for H9KHI8 as seed ortholog is 100%.
Bootstrap support for O84027 as seed ortholog is 100%.

Group of orthologs #150. Best score 77 bits
Score difference with first non-orthologous sequence - A.mellifera:20 C.trachomatis:77

H9K3L8              	100.00%		O84781              	100.00%
H9K6N1              	100.00%		
H9K857              	34.55%		
H9KPY3              	18.89%		
Bootstrap support for H9K3L8 as seed ortholog is 68%.
Alternative seed ortholog is H9K6E6 (20 bits away from this cluster)
Bootstrap support for H9K6N1 as seed ortholog is 69%.
Alternative seed ortholog is H9K6E6 (20 bits away from this cluster)
Bootstrap support for O84781 as seed ortholog is 100%.

Group of orthologs #151. Best score 77 bits
Score difference with first non-orthologous sequence - A.mellifera:77 C.trachomatis:77

H9KAU3              	100.00%		P0C0Z8              	100.00%
Bootstrap support for H9KAU3 as seed ortholog is 100%.
Bootstrap support for P0C0Z8 as seed ortholog is 100%.

Group of orthologs #152. Best score 77 bits
Score difference with first non-orthologous sequence - A.mellifera:77 C.trachomatis:77

H9KR72              	100.00%		O84547              	100.00%
Bootstrap support for H9KR72 as seed ortholog is 100%.
Bootstrap support for O84547 as seed ortholog is 100%.

Group of orthologs #153. Best score 74 bits
Score difference with first non-orthologous sequence - A.mellifera:74 C.trachomatis:74

H9KRJ5              	100.00%		O84338              	100.00%
H9KIQ0              	23.49%		
H9KTF7              	20.90%		
H9KA69              	6.74%		
Bootstrap support for H9KRJ5 as seed ortholog is 100%.
Bootstrap support for O84338 as seed ortholog is 100%.

Group of orthologs #154. Best score 74 bits
Score difference with first non-orthologous sequence - A.mellifera:74 C.trachomatis:74

H9K4L5              	100.00%		O84703              	100.00%
Bootstrap support for H9K4L5 as seed ortholog is 100%.
Bootstrap support for O84703 as seed ortholog is 100%.

Group of orthologs #155. Best score 74 bits
Score difference with first non-orthologous sequence - A.mellifera:74 C.trachomatis:74

H9KHJ0              	100.00%		O84803              	100.00%
Bootstrap support for H9KHJ0 as seed ortholog is 100%.
Bootstrap support for O84803 as seed ortholog is 100%.

Group of orthologs #156. Best score 74 bits
Score difference with first non-orthologous sequence - A.mellifera:11 C.trachomatis:74

H9KJU6              	100.00%		O84611              	100.00%
Bootstrap support for H9KJU6 as seed ortholog is 63%.
Alternative seed ortholog is H9KKX4 (11 bits away from this cluster)
Bootstrap support for O84611 as seed ortholog is 100%.

Group of orthologs #157. Best score 73 bits
Score difference with first non-orthologous sequence - A.mellifera:73 C.trachomatis:73

H9K5C7              	100.00%		O84212              	100.00%
H9KDL6              	26.58%		
H9KHE3              	8.86%		
H9K7Q6              	7.09%		
Bootstrap support for H9K5C7 as seed ortholog is 100%.
Bootstrap support for O84212 as seed ortholog is 100%.

Group of orthologs #158. Best score 72 bits
Score difference with first non-orthologous sequence - A.mellifera:72 C.trachomatis:72

H9KQ50              	100.00%		O84351              	100.00%
                    	       		O84872              	8.11%
Bootstrap support for H9KQ50 as seed ortholog is 100%.
Bootstrap support for O84351 as seed ortholog is 100%.

Group of orthologs #159. Best score 72 bits
Score difference with first non-orthologous sequence - A.mellifera:72 C.trachomatis:72

H9K4L1              	100.00%		P36424              	100.00%
Bootstrap support for H9K4L1 as seed ortholog is 100%.
Bootstrap support for P36424 as seed ortholog is 100%.

Group of orthologs #160. Best score 72 bits
Score difference with first non-orthologous sequence - A.mellifera:72 C.trachomatis:72

H9KGM9              	100.00%		O84221              	100.00%
Bootstrap support for H9KGM9 as seed ortholog is 100%.
Bootstrap support for O84221 as seed ortholog is 100%.

Group of orthologs #161. Best score 72 bits
Score difference with first non-orthologous sequence - A.mellifera:72 C.trachomatis:72

H9KRB6              	100.00%		O84321              	100.00%
Bootstrap support for H9KRB6 as seed ortholog is 100%.
Bootstrap support for O84321 as seed ortholog is 100%.

Group of orthologs #162. Best score 70 bits
Score difference with first non-orthologous sequence - A.mellifera:70 C.trachomatis:70

H9KQX6              	100.00%		O84689              	100.00%
Bootstrap support for H9KQX6 as seed ortholog is 100%.
Bootstrap support for O84689 as seed ortholog is 100%.

Group of orthologs #163. Best score 70 bits
Score difference with first non-orthologous sequence - A.mellifera:70 C.trachomatis:70

H9KS07              	100.00%		O84557              	100.00%
Bootstrap support for H9KS07 as seed ortholog is 100%.
Bootstrap support for O84557 as seed ortholog is 100%.

Group of orthologs #164. Best score 69 bits
Score difference with first non-orthologous sequence - A.mellifera:69 C.trachomatis:69

H9KKH6              	100.00%		O84189              	100.00%
Bootstrap support for H9KKH6 as seed ortholog is 100%.
Bootstrap support for O84189 as seed ortholog is 100%.

Group of orthologs #165. Best score 69 bits
Score difference with first non-orthologous sequence - A.mellifera:69 C.trachomatis:69

H9KSL2              	100.00%		O84719              	100.00%
Bootstrap support for H9KSL2 as seed ortholog is 100%.
Bootstrap support for O84719 as seed ortholog is 100%.

Group of orthologs #166. Best score 68 bits
Score difference with first non-orthologous sequence - A.mellifera:68 C.trachomatis:68

H9K686              	100.00%		P0CD81              	100.00%
Bootstrap support for H9K686 as seed ortholog is 100%.
Bootstrap support for P0CD81 as seed ortholog is 100%.

Group of orthologs #167. Best score 67 bits
Score difference with first non-orthologous sequence - A.mellifera:67 C.trachomatis:67

H9K3Y7              	100.00%		O84842              	100.00%
Bootstrap support for H9K3Y7 as seed ortholog is 100%.
Bootstrap support for O84842 as seed ortholog is 100%.

Group of orthologs #168. Best score 67 bits
Score difference with first non-orthologous sequence - A.mellifera:12 C.trachomatis:67

H9KCB7              	100.00%		O84395              	100.00%
Bootstrap support for H9KCB7 as seed ortholog is 61%.
Alternative seed ortholog is H9KDL0 (12 bits away from this cluster)
Bootstrap support for O84395 as seed ortholog is 100%.

Group of orthologs #169. Best score 67 bits
Score difference with first non-orthologous sequence - A.mellifera:67 C.trachomatis:67

H9KFI8              	100.00%		O84851              	100.00%
Bootstrap support for H9KFI8 as seed ortholog is 100%.
Bootstrap support for O84851 as seed ortholog is 100%.

Group of orthologs #170. Best score 64 bits
Score difference with first non-orthologous sequence - A.mellifera:64 C.trachomatis:64

H9K8M9              	100.00%		O84379              	100.00%
H9K2G1              	38.81%		
Bootstrap support for H9K8M9 as seed ortholog is 100%.
Bootstrap support for O84379 as seed ortholog is 100%.

Group of orthologs #171. Best score 61 bits
Score difference with first non-orthologous sequence - A.mellifera:61 C.trachomatis:61

H9KQ26              	100.00%		O84218              	100.00%
H9KSG4              	44.84%		
H9KIF9              	5.10%		
Bootstrap support for H9KQ26 as seed ortholog is 100%.
Bootstrap support for O84218 as seed ortholog is 100%.

Group of orthologs #172. Best score 61 bits
Score difference with first non-orthologous sequence - A.mellifera:61 C.trachomatis:61

H9K127              	100.00%		P0A4C8              	100.00%
Bootstrap support for H9K127 as seed ortholog is 100%.
Bootstrap support for P0A4C8 as seed ortholog is 100%.

Group of orthologs #173. Best score 60 bits
Score difference with first non-orthologous sequence - A.mellifera:60 C.trachomatis:60

H9K4T9              	100.00%		P0CE04              	100.00%
Bootstrap support for H9K4T9 as seed ortholog is 100%.
Bootstrap support for P0CE04 as seed ortholog is 100%.

Group of orthologs #174. Best score 59 bits
Score difference with first non-orthologous sequence - A.mellifera:59 C.trachomatis:59

H9K3P2              	100.00%		O84792              	100.00%
Bootstrap support for H9K3P2 as seed ortholog is 100%.
Bootstrap support for O84792 as seed ortholog is 100%.

Group of orthologs #175. Best score 59 bits
Score difference with first non-orthologous sequence - A.mellifera:59 C.trachomatis:59

H9K8I9              	100.00%		O84684              	100.00%
Bootstrap support for H9K8I9 as seed ortholog is 100%.
Bootstrap support for O84684 as seed ortholog is 100%.

Group of orthologs #176. Best score 58 bits
Score difference with first non-orthologous sequence - A.mellifera:58 C.trachomatis:58

H9JZS2              	100.00%		O84494              	100.00%
Bootstrap support for H9JZS2 as seed ortholog is 100%.
Bootstrap support for O84494 as seed ortholog is 100%.

Group of orthologs #177. Best score 57 bits
Score difference with first non-orthologous sequence - A.mellifera:15 C.trachomatis:57

H9K499              	100.00%		O84459              	100.00%
Bootstrap support for H9K499 as seed ortholog is 70%.
Alternative seed ortholog is H9KFK7 (15 bits away from this cluster)
Bootstrap support for O84459 as seed ortholog is 100%.

Group of orthologs #178. Best score 57 bits
Score difference with first non-orthologous sequence - A.mellifera:57 C.trachomatis:57

H9K6K8              	100.00%		O84537              	100.00%
Bootstrap support for H9K6K8 as seed ortholog is 100%.
Bootstrap support for O84537 as seed ortholog is 100%.

Group of orthologs #179. Best score 56 bits
Score difference with first non-orthologous sequence - A.mellifera:56 C.trachomatis:56

H9K1E2              	100.00%		O84682              	100.00%
O61367              	99.40%		
H9KEP9              	60.51%		
H9KI57              	10.66%		
Bootstrap support for H9K1E2 as seed ortholog is 100%.
Bootstrap support for O84682 as seed ortholog is 100%.

Group of orthologs #180. Best score 56 bits
Score difference with first non-orthologous sequence - A.mellifera:56 C.trachomatis:56

H9K5M3              	100.00%		O84496              	100.00%
H9KMF4              	18.10%		
Bootstrap support for H9K5M3 as seed ortholog is 100%.
Bootstrap support for O84496 as seed ortholog is 100%.

Group of orthologs #181. Best score 56 bits
Score difference with first non-orthologous sequence - A.mellifera:56 C.trachomatis:56

H9K804              	100.00%		O84822              	100.00%
Bootstrap support for H9K804 as seed ortholog is 100%.
Bootstrap support for O84822 as seed ortholog is 100%.

Group of orthologs #182. Best score 55 bits
Score difference with first non-orthologous sequence - A.mellifera:55 C.trachomatis:55

H9KCA0              	100.00%		O84634              	100.00%
Bootstrap support for H9KCA0 as seed ortholog is 100%.
Bootstrap support for O84634 as seed ortholog is 100%.

Group of orthologs #183. Best score 55 bits
Score difference with first non-orthologous sequence - A.mellifera:55 C.trachomatis:55

H9KDC2              	100.00%		O84778              	100.00%
Bootstrap support for H9KDC2 as seed ortholog is 100%.
Bootstrap support for O84778 as seed ortholog is 100%.

Group of orthologs #184. Best score 54 bits
Score difference with first non-orthologous sequence - A.mellifera:54 C.trachomatis:54

H9K1W9              	100.00%		O84532              	100.00%
Bootstrap support for H9K1W9 as seed ortholog is 100%.
Bootstrap support for O84532 as seed ortholog is 100%.

Group of orthologs #185. Best score 54 bits
Score difference with first non-orthologous sequence - A.mellifera:54 C.trachomatis:54

H9KNT1              	100.00%		O84633              	100.00%
Bootstrap support for H9KNT1 as seed ortholog is 100%.
Bootstrap support for O84633 as seed ortholog is 100%.

Group of orthologs #186. Best score 53 bits
Score difference with first non-orthologous sequence - A.mellifera:53 C.trachomatis:53

H9KEY9              	100.00%		O84527              	100.00%
Bootstrap support for H9KEY9 as seed ortholog is 100%.
Bootstrap support for O84527 as seed ortholog is 100%.

Group of orthologs #187. Best score 53 bits
Score difference with first non-orthologous sequence - A.mellifera:53 C.trachomatis:53

H9KHI9              	100.00%		P26623              	100.00%
Bootstrap support for H9KHI9 as seed ortholog is 100%.
Bootstrap support for P26623 as seed ortholog is 100%.

Group of orthologs #188. Best score 52 bits
Score difference with first non-orthologous sequence - A.mellifera:52 C.trachomatis:52

H9KH67              	100.00%		O84680              	100.00%
H9KEV8              	37.85%		
H9KEJ8              	26.44%		
H9K5E0              	20.67%		
H9KL72              	15.57%		
H9KI11              	13.96%		
H9KQY3              	13.96%		
H9K483              	13.83%		
H9K2Z3              	13.29%		
H9K8L9              	12.75%		
H9K6L2              	11.54%		
H9KE12              	11.54%		
H9KQY5              	11.54%		
H9KTT7              	11.41%		
H9K0X0              	11.41%		
H9KD42              	11.14%		
H9KGG0              	11.14%		
H9KSY1              	9.40%		
H9KMX1              	9.26%		
H9KAI0              	6.71%		
H9K2Q1              	6.44%		
H9K794              	5.91%		
Bootstrap support for H9KH67 as seed ortholog is 100%.
Bootstrap support for O84680 as seed ortholog is 100%.

Group of orthologs #189. Best score 52 bits
Score difference with first non-orthologous sequence - A.mellifera:52 C.trachomatis:52

H9KLM8              	100.00%		O84140              	100.00%
H9KSD2              	47.20%		
H9K3Z9              	44.22%		
H9KMZ8              	38.76%		
H9KAA2              	38.14%		
H9K2A1              	35.40%		
Bootstrap support for H9KLM8 as seed ortholog is 100%.
Bootstrap support for O84140 as seed ortholog is 100%.

Group of orthologs #190. Best score 52 bits
Score difference with first non-orthologous sequence - A.mellifera:52 C.trachomatis:52

H9KI37              	100.00%		O84655              	100.00%
Bootstrap support for H9KI37 as seed ortholog is 100%.
Bootstrap support for O84655 as seed ortholog is 100%.

Group of orthologs #191. Best score 51 bits
Score difference with first non-orthologous sequence - A.mellifera:51 C.trachomatis:51

H9JZL1              	100.00%		P66480              	100.00%
Bootstrap support for H9JZL1 as seed ortholog is 100%.
Bootstrap support for P66480 as seed ortholog is 100%.

Group of orthologs #192. Best score 51 bits
Score difference with first non-orthologous sequence - A.mellifera:51 C.trachomatis:51

H9KJC0              	100.00%		P0CD80              	100.00%
Bootstrap support for H9KJC0 as seed ortholog is 100%.
Bootstrap support for P0CD80 as seed ortholog is 100%.

Group of orthologs #193. Best score 51 bits
Score difference with first non-orthologous sequence - A.mellifera:51 C.trachomatis:51

H9KKB9              	100.00%		P0CE02              	100.00%
Bootstrap support for H9KKB9 as seed ortholog is 100%.
Bootstrap support for P0CE02 as seed ortholog is 100%.

Group of orthologs #194. Best score 50 bits
Score difference with first non-orthologous sequence - A.mellifera:50 C.trachomatis:50

H9K575              	100.00%		O84618              	100.00%
Bootstrap support for H9K575 as seed ortholog is 100%.
Bootstrap support for O84618 as seed ortholog is 100%.

Group of orthologs #195. Best score 47 bits
Score difference with first non-orthologous sequence - A.mellifera:47 C.trachomatis:47

H9KN94              	100.00%		O84244              	100.00%
Bootstrap support for H9KN94 as seed ortholog is 100%.
Bootstrap support for O84244 as seed ortholog is 100%.

Group of orthologs #196. Best score 46 bits
Score difference with first non-orthologous sequence - A.mellifera:46 C.trachomatis:46

H9K7I3              	100.00%		O84219              	100.00%
Bootstrap support for H9K7I3 as seed ortholog is 100%.
Bootstrap support for O84219 as seed ortholog is 100%.

Group of orthologs #197. Best score 45 bits
Score difference with first non-orthologous sequence - A.mellifera:45 C.trachomatis:45

H9KIN9              	100.00%		O84385              	100.00%
Bootstrap support for H9KIN9 as seed ortholog is 100%.
Bootstrap support for O84385 as seed ortholog is 100%.

Group of orthologs #198. Best score 45 bits
Score difference with first non-orthologous sequence - A.mellifera:45 C.trachomatis:45

H9KNY3              	100.00%		O84470              	100.00%
Bootstrap support for H9KNY3 as seed ortholog is 100%.
Bootstrap support for O84470 as seed ortholog is 100%.

Group of orthologs #199. Best score 45 bits
Score difference with first non-orthologous sequence - A.mellifera:45 C.trachomatis:45

H9KQI9              	100.00%		O84299              	100.00%
Bootstrap support for H9KQI9 as seed ortholog is 100%.
Bootstrap support for O84299 as seed ortholog is 100%.

Group of orthologs #200. Best score 44 bits
Score difference with first non-orthologous sequence - A.mellifera:44 C.trachomatis:44

H9K6J1              	100.00%		O84127              	100.00%
Bootstrap support for H9K6J1 as seed ortholog is 100%.
Bootstrap support for O84127 as seed ortholog is 100%.

Group of orthologs #201. Best score 41 bits
Score difference with first non-orthologous sequence - A.mellifera:41 C.trachomatis:41

H9KJR6              	100.00%		O84366              	100.00%
Bootstrap support for H9KJR6 as seed ortholog is 100%.
Bootstrap support for O84366 as seed ortholog is 100%.

Group of orthologs #202. Best score 40 bits
Score difference with first non-orthologous sequence - A.mellifera:40 C.trachomatis:40

H9KSL5              	100.00%		O84288              	100.00%
H9KIM7              	25.63%		O84115              	32.86%
H9K598              	23.04%		
H9K0I3              	12.33%		
H9K4U3              	8.50%		
Bootstrap support for H9KSL5 as seed ortholog is 100%.
Bootstrap support for O84288 as seed ortholog is 100%.