###################################
996 groups of orthologs
1156 in-paralogs from A.darlingi
1067 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3724 bits
Score difference with first non-orthologous sequence - A.darlingi:2514 P.jiroveci:3724

E3X1D9              	100.00%		L0PGR1              	100.00%
Bootstrap support for E3X1D9 as seed ortholog is 100%.
Bootstrap support for L0PGR1 as seed ortholog is 100%.

Group of orthologs #2. Best score 3627 bits
Score difference with first non-orthologous sequence - A.darlingi:3627 P.jiroveci:3627

E3X2Z0              	100.00%		L0PCQ0              	100.00%
Bootstrap support for E3X2Z0 as seed ortholog is 100%.
Bootstrap support for L0PCQ0 as seed ortholog is 100%.

Group of orthologs #3. Best score 2087 bits
Score difference with first non-orthologous sequence - A.darlingi:1149 P.jiroveci:938

E3WPJ7              	100.00%		L0PHB1              	100.00%
Bootstrap support for E3WPJ7 as seed ortholog is 100%.
Bootstrap support for L0PHB1 as seed ortholog is 100%.

Group of orthologs #4. Best score 1897 bits
Score difference with first non-orthologous sequence - A.darlingi:1897 P.jiroveci:1169

E3X5H8              	100.00%		L0PB90              	100.00%
Bootstrap support for E3X5H8 as seed ortholog is 100%.
Bootstrap support for L0PB90 as seed ortholog is 100%.

Group of orthologs #5. Best score 1823 bits
Score difference with first non-orthologous sequence - A.darlingi:1823 P.jiroveci:1823

E3X526              	100.00%		L0PEQ1              	100.00%
Bootstrap support for E3X526 as seed ortholog is 100%.
Bootstrap support for L0PEQ1 as seed ortholog is 100%.

Group of orthologs #6. Best score 1779 bits
Score difference with first non-orthologous sequence - A.darlingi:1779 P.jiroveci:1779

E3XDC1              	100.00%		L0PBF5              	100.00%
Bootstrap support for E3XDC1 as seed ortholog is 100%.
Bootstrap support for L0PBF5 as seed ortholog is 100%.

Group of orthologs #7. Best score 1512 bits
Score difference with first non-orthologous sequence - A.darlingi:1512 P.jiroveci:1512

E3WPE3              	100.00%		L0PGJ4              	100.00%
Bootstrap support for E3WPE3 as seed ortholog is 100%.
Bootstrap support for L0PGJ4 as seed ortholog is 100%.

Group of orthologs #8. Best score 1403 bits
Score difference with first non-orthologous sequence - A.darlingi:1403 P.jiroveci:1403

E3X9S4              	100.00%		L0PG53              	100.00%
Bootstrap support for E3X9S4 as seed ortholog is 100%.
Bootstrap support for L0PG53 as seed ortholog is 100%.

Group of orthologs #9. Best score 1341 bits
Score difference with first non-orthologous sequence - A.darlingi:645 P.jiroveci:946

E3X721              	100.00%		L0PG77              	100.00%
Bootstrap support for E3X721 as seed ortholog is 100%.
Bootstrap support for L0PG77 as seed ortholog is 100%.

Group of orthologs #10. Best score 1228 bits
Score difference with first non-orthologous sequence - A.darlingi:1228 P.jiroveci:1228

E3X0X9              	100.00%		L0P7C3              	100.00%
Bootstrap support for E3X0X9 as seed ortholog is 100%.
Bootstrap support for L0P7C3 as seed ortholog is 100%.

Group of orthologs #11. Best score 1223 bits
Score difference with first non-orthologous sequence - A.darlingi:1121 P.jiroveci:1139

E3XFT7              	100.00%		L0PCG8              	100.00%
Bootstrap support for E3XFT7 as seed ortholog is 100%.
Bootstrap support for L0PCG8 as seed ortholog is 100%.

Group of orthologs #12. Best score 1198 bits
Score difference with first non-orthologous sequence - A.darlingi:1198 P.jiroveci:1198

E3XE36              	100.00%		L0PEL4              	100.00%
Bootstrap support for E3XE36 as seed ortholog is 100%.
Bootstrap support for L0PEL4 as seed ortholog is 100%.

Group of orthologs #13. Best score 1175 bits
Score difference with first non-orthologous sequence - A.darlingi:1175 P.jiroveci:1175

E3X4B6              	100.00%		L0P818              	100.00%
Bootstrap support for E3X4B6 as seed ortholog is 100%.
Bootstrap support for L0P818 as seed ortholog is 100%.

Group of orthologs #14. Best score 1146 bits
Score difference with first non-orthologous sequence - A.darlingi:539 P.jiroveci:1146

E3X238              	100.00%		L0PBE4              	100.00%
Bootstrap support for E3X238 as seed ortholog is 100%.
Bootstrap support for L0PBE4 as seed ortholog is 100%.

Group of orthologs #15. Best score 1133 bits
Score difference with first non-orthologous sequence - A.darlingi:878 P.jiroveci:1133

E3X445              	100.00%		L0PDK3              	100.00%
Bootstrap support for E3X445 as seed ortholog is 100%.
Bootstrap support for L0PDK3 as seed ortholog is 100%.

Group of orthologs #16. Best score 1110 bits
Score difference with first non-orthologous sequence - A.darlingi:1110 P.jiroveci:1110

E3XB30              	100.00%		L0P928              	100.00%
Bootstrap support for E3XB30 as seed ortholog is 100%.
Bootstrap support for L0P928 as seed ortholog is 100%.

Group of orthologs #17. Best score 1088 bits
Score difference with first non-orthologous sequence - A.darlingi:537 P.jiroveci:1088

E3WVU5              	100.00%		L0PEW0              	100.00%
Bootstrap support for E3WVU5 as seed ortholog is 100%.
Bootstrap support for L0PEW0 as seed ortholog is 100%.

Group of orthologs #18. Best score 1083 bits
Score difference with first non-orthologous sequence - A.darlingi:1083 P.jiroveci:1083

E3XFH0              	100.00%		L0PFU4              	100.00%
Bootstrap support for E3XFH0 as seed ortholog is 100%.
Bootstrap support for L0PFU4 as seed ortholog is 100%.

Group of orthologs #19. Best score 1067 bits
Score difference with first non-orthologous sequence - A.darlingi:1067 P.jiroveci:1067

E3WJ53              	100.00%		L0PBY6              	100.00%
Bootstrap support for E3WJ53 as seed ortholog is 100%.
Bootstrap support for L0PBY6 as seed ortholog is 100%.

Group of orthologs #20. Best score 1037 bits
Score difference with first non-orthologous sequence - A.darlingi:1037 P.jiroveci:413

E3WU69              	100.00%		L0PB13              	100.00%
Bootstrap support for E3WU69 as seed ortholog is 100%.
Bootstrap support for L0PB13 as seed ortholog is 100%.

Group of orthologs #21. Best score 1018 bits
Score difference with first non-orthologous sequence - A.darlingi:603 P.jiroveci:571

E3X8A3              	100.00%		L0PG21              	100.00%
Bootstrap support for E3X8A3 as seed ortholog is 100%.
Bootstrap support for L0PG21 as seed ortholog is 100%.

Group of orthologs #22. Best score 974 bits
Score difference with first non-orthologous sequence - A.darlingi:417 P.jiroveci:354

E3WJN3              	100.00%		L0PDB3              	100.00%
Bootstrap support for E3WJN3 as seed ortholog is 100%.
Bootstrap support for L0PDB3 as seed ortholog is 100%.

Group of orthologs #23. Best score 972 bits
Score difference with first non-orthologous sequence - A.darlingi:807 P.jiroveci:972

E3WSI4              	100.00%		L0PFN4              	100.00%
Bootstrap support for E3WSI4 as seed ortholog is 100%.
Bootstrap support for L0PFN4 as seed ortholog is 100%.

Group of orthologs #24. Best score 943 bits
Score difference with first non-orthologous sequence - A.darlingi:943 P.jiroveci:943

E3WLP8              	100.00%		L0PEK6              	100.00%
Bootstrap support for E3WLP8 as seed ortholog is 100%.
Bootstrap support for L0PEK6 as seed ortholog is 100%.

Group of orthologs #25. Best score 921 bits
Score difference with first non-orthologous sequence - A.darlingi:921 P.jiroveci:921

E3XE66              	100.00%		L0P9F0              	100.00%
Bootstrap support for E3XE66 as seed ortholog is 100%.
Bootstrap support for L0P9F0 as seed ortholog is 100%.

Group of orthologs #26. Best score 888 bits
Score difference with first non-orthologous sequence - A.darlingi:549 P.jiroveci:888

E3WSW1              	100.00%		L0PAW9              	100.00%
E3WRL8              	90.77%		L0PBZ0              	71.02%
Bootstrap support for E3WSW1 as seed ortholog is 100%.
Bootstrap support for L0PAW9 as seed ortholog is 100%.

Group of orthologs #27. Best score 882 bits
Score difference with first non-orthologous sequence - A.darlingi:882 P.jiroveci:882

E3X7P3              	100.00%		L0PFL5              	100.00%
Bootstrap support for E3X7P3 as seed ortholog is 100%.
Bootstrap support for L0PFL5 as seed ortholog is 100%.

Group of orthologs #28. Best score 874 bits
Score difference with first non-orthologous sequence - A.darlingi:874 P.jiroveci:115

E3WME3              	100.00%		L0P8X7              	100.00%
Bootstrap support for E3WME3 as seed ortholog is 100%.
Bootstrap support for L0P8X7 as seed ortholog is 100%.

Group of orthologs #29. Best score 863 bits
Score difference with first non-orthologous sequence - A.darlingi:863 P.jiroveci:863

E3WKQ7              	100.00%		L0P9H4              	100.00%
Bootstrap support for E3WKQ7 as seed ortholog is 100%.
Bootstrap support for L0P9H4 as seed ortholog is 100%.

Group of orthologs #30. Best score 843 bits
Score difference with first non-orthologous sequence - A.darlingi:843 P.jiroveci:686

E3WTZ7              	100.00%		L0PFS2              	100.00%
Bootstrap support for E3WTZ7 as seed ortholog is 100%.
Bootstrap support for L0PFS2 as seed ortholog is 100%.

Group of orthologs #31. Best score 838 bits
Score difference with first non-orthologous sequence - A.darlingi:400 P.jiroveci:430

E3WUL3              	100.00%		L0PEL5              	100.00%
                    	       		L0PGC2              	47.79%
Bootstrap support for E3WUL3 as seed ortholog is 100%.
Bootstrap support for L0PEL5 as seed ortholog is 100%.

Group of orthologs #32. Best score 836 bits
Score difference with first non-orthologous sequence - A.darlingi:836 P.jiroveci:836

E3WXG2              	100.00%		L0PDF1              	100.00%
Bootstrap support for E3WXG2 as seed ortholog is 100%.
Bootstrap support for L0PDF1 as seed ortholog is 100%.

Group of orthologs #33. Best score 831 bits
Score difference with first non-orthologous sequence - A.darlingi:609 P.jiroveci:831

E3XFQ7              	100.00%		L0PD55              	100.00%
Bootstrap support for E3XFQ7 as seed ortholog is 100%.
Bootstrap support for L0PD55 as seed ortholog is 100%.

Group of orthologs #34. Best score 825 bits
Score difference with first non-orthologous sequence - A.darlingi:825 P.jiroveci:825

E3X6H8              	100.00%		L0PCC4              	100.00%
Bootstrap support for E3X6H8 as seed ortholog is 100%.
Bootstrap support for L0PCC4 as seed ortholog is 100%.

Group of orthologs #35. Best score 822 bits
Score difference with first non-orthologous sequence - A.darlingi:822 P.jiroveci:628

E3X940              	100.00%		L0PFV0              	100.00%
Bootstrap support for E3X940 as seed ortholog is 100%.
Bootstrap support for L0PFV0 as seed ortholog is 100%.

Group of orthologs #36. Best score 819 bits
Score difference with first non-orthologous sequence - A.darlingi:819 P.jiroveci:819

E3WY41              	100.00%		L0PG12              	100.00%
Bootstrap support for E3WY41 as seed ortholog is 100%.
Bootstrap support for L0PG12 as seed ortholog is 100%.

Group of orthologs #37. Best score 816 bits
Score difference with first non-orthologous sequence - A.darlingi:351 P.jiroveci:219

E3X5A7              	100.00%		L0PFC8              	100.00%
Bootstrap support for E3X5A7 as seed ortholog is 100%.
Bootstrap support for L0PFC8 as seed ortholog is 99%.

Group of orthologs #38. Best score 816 bits
Score difference with first non-orthologous sequence - A.darlingi:486 P.jiroveci:495

E3X9V9              	100.00%		L0PCW9              	100.00%
Bootstrap support for E3X9V9 as seed ortholog is 100%.
Bootstrap support for L0PCW9 as seed ortholog is 100%.

Group of orthologs #39. Best score 807 bits
Score difference with first non-orthologous sequence - A.darlingi:225 P.jiroveci:807

E3WK16              	100.00%		L0PGR4              	100.00%
                    	       		L0PFQ2              	92.36%
Bootstrap support for E3WK16 as seed ortholog is 99%.
Bootstrap support for L0PGR4 as seed ortholog is 100%.

Group of orthologs #40. Best score 807 bits
Score difference with first non-orthologous sequence - A.darlingi:807 P.jiroveci:807

E3XAD1              	100.00%		L0PH89              	100.00%
Bootstrap support for E3XAD1 as seed ortholog is 100%.
Bootstrap support for L0PH89 as seed ortholog is 100%.

Group of orthologs #41. Best score 801 bits
Score difference with first non-orthologous sequence - A.darlingi:505 P.jiroveci:694

E3WUU2              	100.00%		L0PAG9              	100.00%
Bootstrap support for E3WUU2 as seed ortholog is 100%.
Bootstrap support for L0PAG9 as seed ortholog is 100%.

Group of orthologs #42. Best score 801 bits
Score difference with first non-orthologous sequence - A.darlingi:801 P.jiroveci:801

E3X059              	100.00%		L0PFF9              	100.00%
Bootstrap support for E3X059 as seed ortholog is 100%.
Bootstrap support for L0PFF9 as seed ortholog is 100%.

Group of orthologs #43. Best score 795 bits
Score difference with first non-orthologous sequence - A.darlingi:414 P.jiroveci:795

E3WW65              	100.00%		L0PDQ4              	100.00%
Bootstrap support for E3WW65 as seed ortholog is 100%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #44. Best score 788 bits
Score difference with first non-orthologous sequence - A.darlingi:788 P.jiroveci:788

E3XFU5              	100.00%		L0PAV3              	100.00%
Bootstrap support for E3XFU5 as seed ortholog is 100%.
Bootstrap support for L0PAV3 as seed ortholog is 100%.

Group of orthologs #45. Best score 780 bits
Score difference with first non-orthologous sequence - A.darlingi:253 P.jiroveci:780

E3WWK9              	100.00%		L0PDI4              	100.00%
Bootstrap support for E3WWK9 as seed ortholog is 99%.
Bootstrap support for L0PDI4 as seed ortholog is 100%.

Group of orthologs #46. Best score 774 bits
Score difference with first non-orthologous sequence - A.darlingi:774 P.jiroveci:774

E3WQ58              	100.00%		L0PC43              	100.00%
                    	       		L0PCW3              	46.29%
Bootstrap support for E3WQ58 as seed ortholog is 100%.
Bootstrap support for L0PC43 as seed ortholog is 100%.

Group of orthologs #47. Best score 772 bits
Score difference with first non-orthologous sequence - A.darlingi:772 P.jiroveci:772

E3WND7              	100.00%		L0P7X5              	100.00%
Bootstrap support for E3WND7 as seed ortholog is 100%.
Bootstrap support for L0P7X5 as seed ortholog is 100%.

Group of orthologs #48. Best score 761 bits
Score difference with first non-orthologous sequence - A.darlingi:761 P.jiroveci:761

E3WQP8              	100.00%		L0PE96              	100.00%
Bootstrap support for E3WQP8 as seed ortholog is 100%.
Bootstrap support for L0PE96 as seed ortholog is 100%.

Group of orthologs #49. Best score 758 bits
Score difference with first non-orthologous sequence - A.darlingi:758 P.jiroveci:758

E3WVR2              	100.00%		L0P7V1              	100.00%
Bootstrap support for E3WVR2 as seed ortholog is 100%.
Bootstrap support for L0P7V1 as seed ortholog is 100%.

Group of orthologs #50. Best score 754 bits
Score difference with first non-orthologous sequence - A.darlingi:618 P.jiroveci:754

E3XDM8              	100.00%		L0PBA5              	100.00%
E3X3C9              	71.19%		
Bootstrap support for E3XDM8 as seed ortholog is 100%.
Bootstrap support for L0PBA5 as seed ortholog is 100%.

Group of orthologs #51. Best score 751 bits
Score difference with first non-orthologous sequence - A.darlingi:751 P.jiroveci:407

E3WN89              	100.00%		L0P9U5              	100.00%
Bootstrap support for E3WN89 as seed ortholog is 100%.
Bootstrap support for L0P9U5 as seed ortholog is 100%.

Group of orthologs #52. Best score 748 bits
Score difference with first non-orthologous sequence - A.darlingi:748 P.jiroveci:293

E3XFR5              	100.00%		L0P833              	100.00%
Bootstrap support for E3XFR5 as seed ortholog is 100%.
Bootstrap support for L0P833 as seed ortholog is 100%.

Group of orthologs #53. Best score 747 bits
Score difference with first non-orthologous sequence - A.darlingi:246 P.jiroveci:747

E3XFJ3              	100.00%		L0PBR4              	100.00%
Bootstrap support for E3XFJ3 as seed ortholog is 100%.
Bootstrap support for L0PBR4 as seed ortholog is 100%.

Group of orthologs #54. Best score 736 bits
Score difference with first non-orthologous sequence - A.darlingi:736 P.jiroveci:736

E3WK82              	100.00%		L0PFJ0              	100.00%
Bootstrap support for E3WK82 as seed ortholog is 100%.
Bootstrap support for L0PFJ0 as seed ortholog is 100%.

Group of orthologs #55. Best score 735 bits
Score difference with first non-orthologous sequence - A.darlingi:735 P.jiroveci:735

E3WSS4              	100.00%		L0PEU6              	100.00%
Bootstrap support for E3WSS4 as seed ortholog is 100%.
Bootstrap support for L0PEU6 as seed ortholog is 100%.

Group of orthologs #56. Best score 731 bits
Score difference with first non-orthologous sequence - A.darlingi:504 P.jiroveci:731

E3XB28              	100.00%		L0PBV5              	100.00%
Bootstrap support for E3XB28 as seed ortholog is 100%.
Bootstrap support for L0PBV5 as seed ortholog is 100%.

Group of orthologs #57. Best score 730 bits
Score difference with first non-orthologous sequence - A.darlingi:601 P.jiroveci:479

E3X9S6              	100.00%		L0PBP8              	100.00%
Bootstrap support for E3X9S6 as seed ortholog is 100%.
Bootstrap support for L0PBP8 as seed ortholog is 100%.

Group of orthologs #58. Best score 717 bits
Score difference with first non-orthologous sequence - A.darlingi:717 P.jiroveci:717

E3X3Y6              	100.00%		L0PAQ3              	100.00%
Bootstrap support for E3X3Y6 as seed ortholog is 100%.
Bootstrap support for L0PAQ3 as seed ortholog is 100%.

Group of orthologs #59. Best score 713 bits
Score difference with first non-orthologous sequence - A.darlingi:505 P.jiroveci:713

E3XE77              	100.00%		L0PA62              	100.00%
Bootstrap support for E3XE77 as seed ortholog is 100%.
Bootstrap support for L0PA62 as seed ortholog is 100%.

Group of orthologs #60. Best score 710 bits
Score difference with first non-orthologous sequence - A.darlingi:710 P.jiroveci:203

E3XD74              	100.00%		L0PAP2              	100.00%
Bootstrap support for E3XD74 as seed ortholog is 100%.
Bootstrap support for L0PAP2 as seed ortholog is 88%.

Group of orthologs #61. Best score 707 bits
Score difference with first non-orthologous sequence - A.darlingi:707 P.jiroveci:707

E3WXD2              	100.00%		L0P7K0              	100.00%
Bootstrap support for E3WXD2 as seed ortholog is 100%.
Bootstrap support for L0P7K0 as seed ortholog is 100%.

Group of orthologs #62. Best score 706 bits
Score difference with first non-orthologous sequence - A.darlingi:706 P.jiroveci:706

E3X9Y3              	100.00%		L0PAN4              	100.00%
Bootstrap support for E3X9Y3 as seed ortholog is 100%.
Bootstrap support for L0PAN4 as seed ortholog is 100%.

Group of orthologs #63. Best score 698 bits
Score difference with first non-orthologous sequence - A.darlingi:698 P.jiroveci:698

E3XF01              	100.00%		L0P7R6              	100.00%
                    	       		L0PHF8              	100.00%
Bootstrap support for E3XF01 as seed ortholog is 100%.
Bootstrap support for L0P7R6 as seed ortholog is 100%.
Bootstrap support for L0PHF8 as seed ortholog is 100%.

Group of orthologs #64. Best score 697 bits
Score difference with first non-orthologous sequence - A.darlingi:697 P.jiroveci:697

E3X9L6              	100.00%		L0P9R9              	100.00%
Bootstrap support for E3X9L6 as seed ortholog is 100%.
Bootstrap support for L0P9R9 as seed ortholog is 100%.

Group of orthologs #65. Best score 695 bits
Score difference with first non-orthologous sequence - A.darlingi:695 P.jiroveci:695

E3XDV9              	100.00%		L0PBD7              	100.00%
Bootstrap support for E3XDV9 as seed ortholog is 100%.
Bootstrap support for L0PBD7 as seed ortholog is 100%.

Group of orthologs #66. Best score 681 bits
Score difference with first non-orthologous sequence - A.darlingi:455 P.jiroveci:681

E3WKG5              	100.00%		L0PGA5              	100.00%
Bootstrap support for E3WKG5 as seed ortholog is 100%.
Bootstrap support for L0PGA5 as seed ortholog is 100%.

Group of orthologs #67. Best score 681 bits
Score difference with first non-orthologous sequence - A.darlingi:681 P.jiroveci:681

E3WRK2              	100.00%		L0PDF3              	100.00%
Bootstrap support for E3WRK2 as seed ortholog is 100%.
Bootstrap support for L0PDF3 as seed ortholog is 100%.

Group of orthologs #68. Best score 681 bits
Score difference with first non-orthologous sequence - A.darlingi:436 P.jiroveci:681

E3WWS3              	100.00%		L0PC37              	100.00%
Bootstrap support for E3WWS3 as seed ortholog is 100%.
Bootstrap support for L0PC37 as seed ortholog is 100%.

Group of orthologs #69. Best score 677 bits
Score difference with first non-orthologous sequence - A.darlingi:581 P.jiroveci:677

E3XF75              	100.00%		L0P7L0              	100.00%
                    	       		L0PCI7              	40.88%
Bootstrap support for E3XF75 as seed ortholog is 100%.
Bootstrap support for L0P7L0 as seed ortholog is 100%.

Group of orthologs #70. Best score 676 bits
Score difference with first non-orthologous sequence - A.darlingi:127 P.jiroveci:477

E3WWI7              	100.00%		L0PA91              	100.00%
E3WRS7              	94.19%		
E3XBU6              	55.81%		
E3XEE3              	45.35%		
E3WRS8              	34.88%		
Bootstrap support for E3WWI7 as seed ortholog is 100%.
Bootstrap support for L0PA91 as seed ortholog is 100%.

Group of orthologs #71. Best score 666 bits
Score difference with first non-orthologous sequence - A.darlingi:666 P.jiroveci:666

E3X6V5              	100.00%		L0PC54              	100.00%
Bootstrap support for E3X6V5 as seed ortholog is 100%.
Bootstrap support for L0PC54 as seed ortholog is 100%.

Group of orthologs #72. Best score 658 bits
Score difference with first non-orthologous sequence - A.darlingi:387 P.jiroveci:658

E3X6B1              	100.00%		L0PCT0              	100.00%
Bootstrap support for E3X6B1 as seed ortholog is 100%.
Bootstrap support for L0PCT0 as seed ortholog is 100%.

Group of orthologs #73. Best score 656 bits
Score difference with first non-orthologous sequence - A.darlingi:435 P.jiroveci:656

E3WUX0              	100.00%		L0P945              	100.00%
Bootstrap support for E3WUX0 as seed ortholog is 100%.
Bootstrap support for L0P945 as seed ortholog is 100%.

Group of orthologs #74. Best score 656 bits
Score difference with first non-orthologous sequence - A.darlingi:656 P.jiroveci:656

E3WQW3              	100.00%		L0PF68              	100.00%
Bootstrap support for E3WQW3 as seed ortholog is 100%.
Bootstrap support for L0PF68 as seed ortholog is 100%.

Group of orthologs #75. Best score 652 bits
Score difference with first non-orthologous sequence - A.darlingi:430 P.jiroveci:338

E3XFB7              	100.00%		L0PG32              	100.00%
Bootstrap support for E3XFB7 as seed ortholog is 100%.
Bootstrap support for L0PG32 as seed ortholog is 100%.

Group of orthologs #76. Best score 648 bits
Score difference with first non-orthologous sequence - A.darlingi:487 P.jiroveci:648

E3XEL5              	100.00%		L0PER6              	100.00%
Bootstrap support for E3XEL5 as seed ortholog is 100%.
Bootstrap support for L0PER6 as seed ortholog is 100%.

Group of orthologs #77. Best score 643 bits
Score difference with first non-orthologous sequence - A.darlingi:643 P.jiroveci:643

E3X4T2              	100.00%		L0PDG3              	100.00%
Bootstrap support for E3X4T2 as seed ortholog is 100%.
Bootstrap support for L0PDG3 as seed ortholog is 100%.

Group of orthologs #78. Best score 639 bits
Score difference with first non-orthologous sequence - A.darlingi:526 P.jiroveci:477

E3XBW5              	100.00%		L0PIF0              	100.00%
Bootstrap support for E3XBW5 as seed ortholog is 100%.
Bootstrap support for L0PIF0 as seed ortholog is 100%.

Group of orthologs #79. Best score 628 bits
Score difference with first non-orthologous sequence - A.darlingi:424 P.jiroveci:628

E3XDB2              	100.00%		L0P976              	100.00%
Bootstrap support for E3XDB2 as seed ortholog is 100%.
Bootstrap support for L0P976 as seed ortholog is 100%.

Group of orthologs #80. Best score 628 bits
Score difference with first non-orthologous sequence - A.darlingi:583 P.jiroveci:628

E3XFN3              	100.00%		L0PDM6              	100.00%
Bootstrap support for E3XFN3 as seed ortholog is 100%.
Bootstrap support for L0PDM6 as seed ortholog is 100%.

Group of orthologs #81. Best score 626 bits
Score difference with first non-orthologous sequence - A.darlingi:626 P.jiroveci:626

E3WR35              	100.00%		L0PG19              	100.00%
Bootstrap support for E3WR35 as seed ortholog is 100%.
Bootstrap support for L0PG19 as seed ortholog is 100%.

Group of orthologs #82. Best score 621 bits
Score difference with first non-orthologous sequence - A.darlingi:621 P.jiroveci:621

E3X5D2              	100.00%		L0PC79              	100.00%
E3X5D1              	33.75%		
E3X9E3              	26.85%		
Bootstrap support for E3X5D2 as seed ortholog is 100%.
Bootstrap support for L0PC79 as seed ortholog is 100%.

Group of orthologs #83. Best score 617 bits
Score difference with first non-orthologous sequence - A.darlingi:617 P.jiroveci:617

E3WNT4              	100.00%		L0PB96              	100.00%
Bootstrap support for E3WNT4 as seed ortholog is 100%.
Bootstrap support for L0PB96 as seed ortholog is 100%.

Group of orthologs #84. Best score 613 bits
Score difference with first non-orthologous sequence - A.darlingi:613 P.jiroveci:613

E3WT48              	100.00%		L0PDK6              	100.00%
Bootstrap support for E3WT48 as seed ortholog is 100%.
Bootstrap support for L0PDK6 as seed ortholog is 100%.

Group of orthologs #85. Best score 611 bits
Score difference with first non-orthologous sequence - A.darlingi:611 P.jiroveci:611

E3X525              	100.00%		L0PBJ1              	100.00%
Bootstrap support for E3X525 as seed ortholog is 100%.
Bootstrap support for L0PBJ1 as seed ortholog is 100%.

Group of orthologs #86. Best score 611 bits
Score difference with first non-orthologous sequence - A.darlingi:611 P.jiroveci:611

E3XAS4              	100.00%		L0PBY5              	100.00%
Bootstrap support for E3XAS4 as seed ortholog is 100%.
Bootstrap support for L0PBY5 as seed ortholog is 100%.

Group of orthologs #87. Best score 604 bits
Score difference with first non-orthologous sequence - A.darlingi:604 P.jiroveci:604

E3XG87              	100.00%		L0P8G2              	100.00%
Bootstrap support for E3XG87 as seed ortholog is 100%.
Bootstrap support for L0P8G2 as seed ortholog is 100%.

Group of orthologs #88. Best score 600 bits
Score difference with first non-orthologous sequence - A.darlingi:600 P.jiroveci:600

E3X0T6              	100.00%		L0PB98              	100.00%
Bootstrap support for E3X0T6 as seed ortholog is 100%.
Bootstrap support for L0PB98 as seed ortholog is 100%.

Group of orthologs #89. Best score 598 bits
Score difference with first non-orthologous sequence - A.darlingi:598 P.jiroveci:339

E3WPH5              	100.00%		L0PE26              	100.00%
Bootstrap support for E3WPH5 as seed ortholog is 100%.
Bootstrap support for L0PE26 as seed ortholog is 100%.

Group of orthologs #90. Best score 596 bits
Score difference with first non-orthologous sequence - A.darlingi:459 P.jiroveci:596

E3WVM7              	100.00%		L0PGS4              	100.00%
Bootstrap support for E3WVM7 as seed ortholog is 100%.
Bootstrap support for L0PGS4 as seed ortholog is 100%.

Group of orthologs #91. Best score 585 bits
Score difference with first non-orthologous sequence - A.darlingi:585 P.jiroveci:585

E3WPM6              	100.00%		L0PEK9              	100.00%
Bootstrap support for E3WPM6 as seed ortholog is 100%.
Bootstrap support for L0PEK9 as seed ortholog is 100%.

Group of orthologs #92. Best score 581 bits
Score difference with first non-orthologous sequence - A.darlingi:581 P.jiroveci:581

E3WKG6              	100.00%		L0PGT9              	100.00%
E3WJW3              	18.45%		
Bootstrap support for E3WKG6 as seed ortholog is 100%.
Bootstrap support for L0PGT9 as seed ortholog is 100%.

Group of orthologs #93. Best score 581 bits
Score difference with first non-orthologous sequence - A.darlingi:362 P.jiroveci:430

E3X472              	100.00%		L0P8E7              	100.00%
Bootstrap support for E3X472 as seed ortholog is 100%.
Bootstrap support for L0P8E7 as seed ortholog is 100%.

Group of orthologs #94. Best score 576 bits
Score difference with first non-orthologous sequence - A.darlingi:576 P.jiroveci:576

E3WLT6              	100.00%		L0PA85              	100.00%
Bootstrap support for E3WLT6 as seed ortholog is 100%.
Bootstrap support for L0PA85 as seed ortholog is 100%.

Group of orthologs #95. Best score 571 bits
Score difference with first non-orthologous sequence - A.darlingi:366 P.jiroveci:318

E3X1V9              	100.00%		L0P853              	100.00%
                    	       		L0P8M8              	57.74%
Bootstrap support for E3X1V9 as seed ortholog is 100%.
Bootstrap support for L0P853 as seed ortholog is 100%.

Group of orthologs #96. Best score 571 bits
Score difference with first non-orthologous sequence - A.darlingi:571 P.jiroveci:571

E3WQA3              	100.00%		L0PDR3              	100.00%
Bootstrap support for E3WQA3 as seed ortholog is 100%.
Bootstrap support for L0PDR3 as seed ortholog is 100%.

Group of orthologs #97. Best score 570 bits
Score difference with first non-orthologous sequence - A.darlingi:348 P.jiroveci:570

E3XDW7              	100.00%		L0PG07              	100.00%
Bootstrap support for E3XDW7 as seed ortholog is 100%.
Bootstrap support for L0PG07 as seed ortholog is 100%.

Group of orthologs #98. Best score 569 bits
Score difference with first non-orthologous sequence - A.darlingi:569 P.jiroveci:569

E3WVX0              	100.00%		L0P9S1              	100.00%
Bootstrap support for E3WVX0 as seed ortholog is 100%.
Bootstrap support for L0P9S1 as seed ortholog is 100%.

Group of orthologs #99. Best score 569 bits
Score difference with first non-orthologous sequence - A.darlingi:336 P.jiroveci:51

E3X1Z0              	100.00%		L0PC64              	100.00%
Bootstrap support for E3X1Z0 as seed ortholog is 100%.
Bootstrap support for L0PC64 as seed ortholog is 97%.

Group of orthologs #100. Best score 568 bits
Score difference with first non-orthologous sequence - A.darlingi:568 P.jiroveci:62

E3WJD3              	100.00%		L0P9J9              	100.00%
Bootstrap support for E3WJD3 as seed ortholog is 100%.
Bootstrap support for L0P9J9 as seed ortholog is 63%.
Alternative seed ortholog is L0PF72 (62 bits away from this cluster)

Group of orthologs #101. Best score 567 bits
Score difference with first non-orthologous sequence - A.darlingi:567 P.jiroveci:567

E3WSB6              	100.00%		L0P8L6              	100.00%
Bootstrap support for E3WSB6 as seed ortholog is 100%.
Bootstrap support for L0P8L6 as seed ortholog is 100%.

Group of orthologs #102. Best score 565 bits
Score difference with first non-orthologous sequence - A.darlingi:565 P.jiroveci:565

E3XAI4              	100.00%		L0PF80              	100.00%
Bootstrap support for E3XAI4 as seed ortholog is 100%.
Bootstrap support for L0PF80 as seed ortholog is 100%.

Group of orthologs #103. Best score 564 bits
Score difference with first non-orthologous sequence - A.darlingi:476 P.jiroveci:472

E3WPI7              	100.00%		L0PCS2              	100.00%
Bootstrap support for E3WPI7 as seed ortholog is 100%.
Bootstrap support for L0PCS2 as seed ortholog is 100%.

Group of orthologs #104. Best score 563 bits
Score difference with first non-orthologous sequence - A.darlingi:563 P.jiroveci:563

E3WVS1              	100.00%		L0PES7              	100.00%
Bootstrap support for E3WVS1 as seed ortholog is 100%.
Bootstrap support for L0PES7 as seed ortholog is 100%.

Group of orthologs #105. Best score 560 bits
Score difference with first non-orthologous sequence - A.darlingi:560 P.jiroveci:560

E3XF55              	100.00%		L0PBN0              	100.00%
Bootstrap support for E3XF55 as seed ortholog is 100%.
Bootstrap support for L0PBN0 as seed ortholog is 100%.

Group of orthologs #106. Best score 555 bits
Score difference with first non-orthologous sequence - A.darlingi:555 P.jiroveci:555

E3X470              	100.00%		L0PA45              	100.00%
Bootstrap support for E3X470 as seed ortholog is 100%.
Bootstrap support for L0PA45 as seed ortholog is 100%.

Group of orthologs #107. Best score 553 bits
Score difference with first non-orthologous sequence - A.darlingi:553 P.jiroveci:553

E3WQT1              	100.00%		L0P7N3              	100.00%
Bootstrap support for E3WQT1 as seed ortholog is 100%.
Bootstrap support for L0P7N3 as seed ortholog is 100%.

Group of orthologs #108. Best score 553 bits
Score difference with first non-orthologous sequence - A.darlingi:553 P.jiroveci:553

E3X5F9              	100.00%		L0PA93              	100.00%
Bootstrap support for E3X5F9 as seed ortholog is 100%.
Bootstrap support for L0PA93 as seed ortholog is 100%.

Group of orthologs #109. Best score 552 bits
Score difference with first non-orthologous sequence - A.darlingi:552 P.jiroveci:552

E3X144              	100.00%		L0P8M6              	100.00%
Bootstrap support for E3X144 as seed ortholog is 100%.
Bootstrap support for L0P8M6 as seed ortholog is 100%.

Group of orthologs #110. Best score 550 bits
Score difference with first non-orthologous sequence - A.darlingi:227 P.jiroveci:170

E3WLG7              	100.00%		L0PEK2              	100.00%
Bootstrap support for E3WLG7 as seed ortholog is 99%.
Bootstrap support for L0PEK2 as seed ortholog is 99%.

Group of orthologs #111. Best score 549 bits
Score difference with first non-orthologous sequence - A.darlingi:549 P.jiroveci:549

E3X918              	100.00%		L0P917              	100.00%
                    	       		L0PF20              	86.38%
Bootstrap support for E3X918 as seed ortholog is 100%.
Bootstrap support for L0P917 as seed ortholog is 100%.

Group of orthologs #112. Best score 549 bits
Score difference with first non-orthologous sequence - A.darlingi:549 P.jiroveci:549

E3XBS5              	100.00%		L0PAX4              	100.00%
Bootstrap support for E3XBS5 as seed ortholog is 100%.
Bootstrap support for L0PAX4 as seed ortholog is 100%.

Group of orthologs #113. Best score 540 bits
Score difference with first non-orthologous sequence - A.darlingi:463 P.jiroveci:540

E3WZH9              	100.00%		L0P802              	100.00%
Bootstrap support for E3WZH9 as seed ortholog is 100%.
Bootstrap support for L0P802 as seed ortholog is 100%.

Group of orthologs #114. Best score 537 bits
Score difference with first non-orthologous sequence - A.darlingi:537 P.jiroveci:537

E3X115              	100.00%		L0PG27              	100.00%
Bootstrap support for E3X115 as seed ortholog is 100%.
Bootstrap support for L0PG27 as seed ortholog is 100%.

Group of orthologs #115. Best score 533 bits
Score difference with first non-orthologous sequence - A.darlingi:533 P.jiroveci:533

E3WUM7              	100.00%		L0PCV7              	100.00%
Bootstrap support for E3WUM7 as seed ortholog is 100%.
Bootstrap support for L0PCV7 as seed ortholog is 100%.

Group of orthologs #116. Best score 532 bits
Score difference with first non-orthologous sequence - A.darlingi:216 P.jiroveci:532

E3XDE6              	100.00%		L0PDY0              	100.00%
Bootstrap support for E3XDE6 as seed ortholog is 100%.
Bootstrap support for L0PDY0 as seed ortholog is 100%.

Group of orthologs #117. Best score 529 bits
Score difference with first non-orthologous sequence - A.darlingi:529 P.jiroveci:529

E3WYS7              	100.00%		L0PFI9              	100.00%
Bootstrap support for E3WYS7 as seed ortholog is 100%.
Bootstrap support for L0PFI9 as seed ortholog is 100%.

Group of orthologs #118. Best score 525 bits
Score difference with first non-orthologous sequence - A.darlingi:329 P.jiroveci:525

E3WWB1              	100.00%		L0P6X8              	100.00%
Bootstrap support for E3WWB1 as seed ortholog is 100%.
Bootstrap support for L0P6X8 as seed ortholog is 100%.

Group of orthologs #119. Best score 524 bits
Score difference with first non-orthologous sequence - A.darlingi:104 P.jiroveci:459

E3WVE4              	100.00%		L0PBW1              	100.00%
Bootstrap support for E3WVE4 as seed ortholog is 96%.
Bootstrap support for L0PBW1 as seed ortholog is 100%.

Group of orthologs #120. Best score 523 bits
Score difference with first non-orthologous sequence - A.darlingi:291 P.jiroveci:523

E3WZM3              	100.00%		L0PAR0              	100.00%
Bootstrap support for E3WZM3 as seed ortholog is 100%.
Bootstrap support for L0PAR0 as seed ortholog is 100%.

Group of orthologs #121. Best score 520 bits
Score difference with first non-orthologous sequence - A.darlingi:520 P.jiroveci:520

E3WP73              	100.00%		L0PCX1              	100.00%
Bootstrap support for E3WP73 as seed ortholog is 100%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #122. Best score 519 bits
Score difference with first non-orthologous sequence - A.darlingi:519 P.jiroveci:519

E3X1L6              	100.00%		L0PCA7              	100.00%
Bootstrap support for E3X1L6 as seed ortholog is 100%.
Bootstrap support for L0PCA7 as seed ortholog is 100%.

Group of orthologs #123. Best score 516 bits
Score difference with first non-orthologous sequence - A.darlingi:516 P.jiroveci:516

E3X8A9              	100.00%		L0PC44              	100.00%
Bootstrap support for E3X8A9 as seed ortholog is 100%.
Bootstrap support for L0PC44 as seed ortholog is 100%.

Group of orthologs #124. Best score 515 bits
Score difference with first non-orthologous sequence - A.darlingi:65 P.jiroveci:72

E3XAK6              	100.00%		L0P9U6              	100.00%
Bootstrap support for E3XAK6 as seed ortholog is 90%.
Bootstrap support for L0P9U6 as seed ortholog is 93%.

Group of orthologs #125. Best score 514 bits
Score difference with first non-orthologous sequence - A.darlingi:514 P.jiroveci:514

E3X863              	100.00%		L0P6Y2              	100.00%
Bootstrap support for E3X863 as seed ortholog is 100%.
Bootstrap support for L0P6Y2 as seed ortholog is 100%.

Group of orthologs #126. Best score 513 bits
Score difference with first non-orthologous sequence - A.darlingi:513 P.jiroveci:513

E3XB60              	100.00%		L0P8W6              	100.00%
Bootstrap support for E3XB60 as seed ortholog is 100%.
Bootstrap support for L0P8W6 as seed ortholog is 100%.

Group of orthologs #127. Best score 512 bits
Score difference with first non-orthologous sequence - A.darlingi:293 P.jiroveci:512

E3WJ96              	100.00%		L0PG45              	100.00%
Bootstrap support for E3WJ96 as seed ortholog is 100%.
Bootstrap support for L0PG45 as seed ortholog is 100%.

Group of orthologs #128. Best score 511 bits
Score difference with first non-orthologous sequence - A.darlingi:159 P.jiroveci:511

E3WSV7              	100.00%		L0PET9              	100.00%
Bootstrap support for E3WSV7 as seed ortholog is 99%.
Bootstrap support for L0PET9 as seed ortholog is 100%.

Group of orthologs #129. Best score 510 bits
Score difference with first non-orthologous sequence - A.darlingi:97 P.jiroveci:10

E3XDU6              	100.00%		L0PGY9              	100.00%
Bootstrap support for E3XDU6 as seed ortholog is 99%.
Bootstrap support for L0PGY9 as seed ortholog is 61%.
Alternative seed ortholog is L0PCK5 (10 bits away from this cluster)

Group of orthologs #130. Best score 509 bits
Score difference with first non-orthologous sequence - A.darlingi:78 P.jiroveci:390

E3WQX3              	100.00%		L0PG61              	100.00%
                    	       		L0PAC9              	7.95%
Bootstrap support for E3WQX3 as seed ortholog is 98%.
Bootstrap support for L0PG61 as seed ortholog is 99%.

Group of orthologs #131. Best score 507 bits
Score difference with first non-orthologous sequence - A.darlingi:507 P.jiroveci:166

E3X9N0              	100.00%		L0PBP3              	100.00%
Bootstrap support for E3X9N0 as seed ortholog is 100%.
Bootstrap support for L0PBP3 as seed ortholog is 99%.

Group of orthologs #132. Best score 506 bits
Score difference with first non-orthologous sequence - A.darlingi:397 P.jiroveci:446

E3WWC9              	100.00%		L0PBU6              	100.00%
Bootstrap support for E3WWC9 as seed ortholog is 100%.
Bootstrap support for L0PBU6 as seed ortholog is 100%.

Group of orthologs #133. Best score 504 bits
Score difference with first non-orthologous sequence - A.darlingi:504 P.jiroveci:504

E3WJJ3              	100.00%		L0P9D4              	100.00%
Bootstrap support for E3WJJ3 as seed ortholog is 100%.
Bootstrap support for L0P9D4 as seed ortholog is 100%.

Group of orthologs #134. Best score 503 bits
Score difference with first non-orthologous sequence - A.darlingi:503 P.jiroveci:369

E3X9N9              	100.00%		L0P7R1              	100.00%
Bootstrap support for E3X9N9 as seed ortholog is 100%.
Bootstrap support for L0P7R1 as seed ortholog is 100%.

Group of orthologs #135. Best score 502 bits
Score difference with first non-orthologous sequence - A.darlingi:502 P.jiroveci:502

E3X1B0              	100.00%		L0PCP1              	100.00%
Bootstrap support for E3X1B0 as seed ortholog is 100%.
Bootstrap support for L0PCP1 as seed ortholog is 100%.

Group of orthologs #136. Best score 499 bits
Score difference with first non-orthologous sequence - A.darlingi:499 P.jiroveci:499

E3WRH9              	100.00%		L0PAP1              	100.00%
Bootstrap support for E3WRH9 as seed ortholog is 100%.
Bootstrap support for L0PAP1 as seed ortholog is 100%.

Group of orthologs #137. Best score 498 bits
Score difference with first non-orthologous sequence - A.darlingi:498 P.jiroveci:498

E3WUV4              	100.00%		L0PBW3              	100.00%
Bootstrap support for E3WUV4 as seed ortholog is 100%.
Bootstrap support for L0PBW3 as seed ortholog is 100%.

Group of orthologs #138. Best score 498 bits
Score difference with first non-orthologous sequence - A.darlingi:498 P.jiroveci:498

E3X7U0              	100.00%		L0PBR9              	100.00%
Bootstrap support for E3X7U0 as seed ortholog is 100%.
Bootstrap support for L0PBR9 as seed ortholog is 100%.

Group of orthologs #139. Best score 495 bits
Score difference with first non-orthologous sequence - A.darlingi:495 P.jiroveci:495

E3X5T6              	100.00%		L0PFQ5              	100.00%
Bootstrap support for E3X5T6 as seed ortholog is 100%.
Bootstrap support for L0PFQ5 as seed ortholog is 100%.

Group of orthologs #140. Best score 495 bits
Score difference with first non-orthologous sequence - A.darlingi:274 P.jiroveci:495

E3XCB9              	100.00%		L0PB12              	100.00%
Bootstrap support for E3XCB9 as seed ortholog is 100%.
Bootstrap support for L0PB12 as seed ortholog is 100%.

Group of orthologs #141. Best score 492 bits
Score difference with first non-orthologous sequence - A.darlingi:492 P.jiroveci:492

E3WMX7              	100.00%		L0P6R7              	100.00%
Bootstrap support for E3WMX7 as seed ortholog is 100%.
Bootstrap support for L0P6R7 as seed ortholog is 100%.

Group of orthologs #142. Best score 492 bits
Score difference with first non-orthologous sequence - A.darlingi:492 P.jiroveci:492

E3WJ46              	100.00%		L0PF08              	100.00%
Bootstrap support for E3WJ46 as seed ortholog is 100%.
Bootstrap support for L0PF08 as seed ortholog is 100%.

Group of orthologs #143. Best score 492 bits
Score difference with first non-orthologous sequence - A.darlingi:374 P.jiroveci:377

E3WN16              	100.00%		L0PE30              	100.00%
Bootstrap support for E3WN16 as seed ortholog is 100%.
Bootstrap support for L0PE30 as seed ortholog is 100%.

Group of orthologs #144. Best score 490 bits
Score difference with first non-orthologous sequence - A.darlingi:490 P.jiroveci:490

E3WTW2              	100.00%		L0PFN9              	100.00%
Bootstrap support for E3WTW2 as seed ortholog is 100%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #145. Best score 488 bits
Score difference with first non-orthologous sequence - A.darlingi:488 P.jiroveci:488

E3XAB0              	100.00%		L0P7B5              	100.00%
Bootstrap support for E3XAB0 as seed ortholog is 100%.
Bootstrap support for L0P7B5 as seed ortholog is 100%.

Group of orthologs #146. Best score 488 bits
Score difference with first non-orthologous sequence - A.darlingi:126 P.jiroveci:488

E3XD75              	100.00%		L0PB85              	100.00%
Bootstrap support for E3XD75 as seed ortholog is 99%.
Bootstrap support for L0PB85 as seed ortholog is 100%.

Group of orthologs #147. Best score 487 bits
Score difference with first non-orthologous sequence - A.darlingi:287 P.jiroveci:487

E3WJ36              	100.00%		L0P9I8              	100.00%
Bootstrap support for E3WJ36 as seed ortholog is 100%.
Bootstrap support for L0P9I8 as seed ortholog is 100%.

Group of orthologs #148. Best score 487 bits
Score difference with first non-orthologous sequence - A.darlingi:487 P.jiroveci:487

E3XAZ7              	100.00%		L0PEL0              	100.00%
Bootstrap support for E3XAZ7 as seed ortholog is 100%.
Bootstrap support for L0PEL0 as seed ortholog is 100%.

Group of orthologs #149. Best score 487 bits
Score difference with first non-orthologous sequence - A.darlingi:487 P.jiroveci:404

E3XF90              	100.00%		L0PER3              	100.00%
Bootstrap support for E3XF90 as seed ortholog is 100%.
Bootstrap support for L0PER3 as seed ortholog is 100%.

Group of orthologs #150. Best score 486 bits
Score difference with first non-orthologous sequence - A.darlingi:408 P.jiroveci:425

E3X213              	100.00%		L0PDG5              	100.00%
Bootstrap support for E3X213 as seed ortholog is 100%.
Bootstrap support for L0PDG5 as seed ortholog is 100%.

Group of orthologs #151. Best score 486 bits
Score difference with first non-orthologous sequence - A.darlingi:486 P.jiroveci:309

E3WZY3              	100.00%		L0PGL8              	100.00%
Bootstrap support for E3WZY3 as seed ortholog is 100%.
Bootstrap support for L0PGL8 as seed ortholog is 99%.

Group of orthologs #152. Best score 480 bits
Score difference with first non-orthologous sequence - A.darlingi:415 P.jiroveci:389

E3WJ22              	100.00%		L0PA41              	100.00%
Bootstrap support for E3WJ22 as seed ortholog is 100%.
Bootstrap support for L0PA41 as seed ortholog is 100%.

Group of orthologs #153. Best score 479 bits
Score difference with first non-orthologous sequence - A.darlingi:342 P.jiroveci:298

E3WZR6              	100.00%		L0PCD8              	100.00%
Bootstrap support for E3WZR6 as seed ortholog is 100%.
Bootstrap support for L0PCD8 as seed ortholog is 100%.

Group of orthologs #154. Best score 479 bits
Score difference with first non-orthologous sequence - A.darlingi:479 P.jiroveci:479

E3X7H5              	100.00%		L0P7T0              	100.00%
Bootstrap support for E3X7H5 as seed ortholog is 100%.
Bootstrap support for L0P7T0 as seed ortholog is 100%.

Group of orthologs #155. Best score 478 bits
Score difference with first non-orthologous sequence - A.darlingi:381 P.jiroveci:478

E3XBW7              	100.00%		L0PD32              	100.00%
                    	       		L0PD26              	94.32%
Bootstrap support for E3XBW7 as seed ortholog is 100%.
Bootstrap support for L0PD32 as seed ortholog is 100%.

Group of orthologs #156. Best score 477 bits
Score difference with first non-orthologous sequence - A.darlingi:217 P.jiroveci:277

E3XFF7              	100.00%		L0PBN5              	100.00%
Bootstrap support for E3XFF7 as seed ortholog is 99%.
Bootstrap support for L0PBN5 as seed ortholog is 100%.

Group of orthologs #157. Best score 474 bits
Score difference with first non-orthologous sequence - A.darlingi:337 P.jiroveci:397

E3WQQ9              	100.00%		L0PG55              	100.00%
Bootstrap support for E3WQQ9 as seed ortholog is 100%.
Bootstrap support for L0PG55 as seed ortholog is 100%.

Group of orthologs #158. Best score 473 bits
Score difference with first non-orthologous sequence - A.darlingi:358 P.jiroveci:473

E3WM93              	100.00%		L0PGH3              	100.00%
E3XGD1              	49.40%		
Bootstrap support for E3WM93 as seed ortholog is 100%.
Bootstrap support for L0PGH3 as seed ortholog is 100%.

Group of orthologs #159. Best score 473 bits
Score difference with first non-orthologous sequence - A.darlingi:317 P.jiroveci:213

E3WNJ8              	100.00%		L0PA75              	100.00%
Bootstrap support for E3WNJ8 as seed ortholog is 100%.
Bootstrap support for L0PA75 as seed ortholog is 100%.

Group of orthologs #160. Best score 473 bits
Score difference with first non-orthologous sequence - A.darlingi:473 P.jiroveci:473

E3X7W7              	100.00%		L0PCT1              	100.00%
Bootstrap support for E3X7W7 as seed ortholog is 100%.
Bootstrap support for L0PCT1 as seed ortholog is 100%.

Group of orthologs #161. Best score 472 bits
Score difference with first non-orthologous sequence - A.darlingi:411 P.jiroveci:190

E3WNX3              	100.00%		L0PDH7              	100.00%
Bootstrap support for E3WNX3 as seed ortholog is 100%.
Bootstrap support for L0PDH7 as seed ortholog is 100%.

Group of orthologs #162. Best score 471 bits
Score difference with first non-orthologous sequence - A.darlingi:393 P.jiroveci:471

E3X733              	100.00%		L0PB50              	100.00%
Bootstrap support for E3X733 as seed ortholog is 100%.
Bootstrap support for L0PB50 as seed ortholog is 100%.

Group of orthologs #163. Best score 470 bits
Score difference with first non-orthologous sequence - A.darlingi:470 P.jiroveci:470

E3WZR3              	100.00%		L0PHY6              	100.00%
Bootstrap support for E3WZR3 as seed ortholog is 100%.
Bootstrap support for L0PHY6 as seed ortholog is 100%.

Group of orthologs #164. Best score 465 bits
Score difference with first non-orthologous sequence - A.darlingi:357 P.jiroveci:133

E3WKP8              	100.00%		L0P890              	100.00%
Bootstrap support for E3WKP8 as seed ortholog is 100%.
Bootstrap support for L0P890 as seed ortholog is 99%.

Group of orthologs #165. Best score 465 bits
Score difference with first non-orthologous sequence - A.darlingi:465 P.jiroveci:465

E3XEC7              	100.00%		L0PDC9              	100.00%
Bootstrap support for E3XEC7 as seed ortholog is 100%.
Bootstrap support for L0PDC9 as seed ortholog is 100%.

Group of orthologs #166. Best score 463 bits
Score difference with first non-orthologous sequence - A.darlingi:463 P.jiroveci:463

E3XDS7              	100.00%		L0PCY5              	100.00%
E3WXX0              	11.23%		
Bootstrap support for E3XDS7 as seed ortholog is 100%.
Bootstrap support for L0PCY5 as seed ortholog is 100%.

Group of orthologs #167. Best score 463 bits
Score difference with first non-orthologous sequence - A.darlingi:216 P.jiroveci:392

E3X7M8              	100.00%		L0PB67              	100.00%
Bootstrap support for E3X7M8 as seed ortholog is 100%.
Bootstrap support for L0PB67 as seed ortholog is 100%.

Group of orthologs #168. Best score 463 bits
Score difference with first non-orthologous sequence - A.darlingi:30 P.jiroveci:463

E3X5V6              	100.00%		L0PGU1              	100.00%
Bootstrap support for E3X5V6 as seed ortholog is 75%.
Bootstrap support for L0PGU1 as seed ortholog is 100%.

Group of orthologs #169. Best score 461 bits
Score difference with first non-orthologous sequence - A.darlingi:461 P.jiroveci:461

E3WR62              	100.00%		L0PAN9              	100.00%
                    	       		L0PID8              	83.65%
Bootstrap support for E3WR62 as seed ortholog is 100%.
Bootstrap support for L0PAN9 as seed ortholog is 100%.

Group of orthologs #170. Best score 460 bits
Score difference with first non-orthologous sequence - A.darlingi:175 P.jiroveci:122

E3XFL0              	100.00%		L0P6T3              	100.00%
Bootstrap support for E3XFL0 as seed ortholog is 100%.
Bootstrap support for L0P6T3 as seed ortholog is 99%.

Group of orthologs #171. Best score 456 bits
Score difference with first non-orthologous sequence - A.darlingi:142 P.jiroveci:80

E3WKG2              	100.00%		L0PGE8              	100.00%
Bootstrap support for E3WKG2 as seed ortholog is 99%.
Bootstrap support for L0PGE8 as seed ortholog is 90%.

Group of orthologs #172. Best score 455 bits
Score difference with first non-orthologous sequence - A.darlingi:389 P.jiroveci:455

E3XB25              	100.00%		L0P9C8              	100.00%
Bootstrap support for E3XB25 as seed ortholog is 100%.
Bootstrap support for L0P9C8 as seed ortholog is 100%.

Group of orthologs #173. Best score 454 bits
Score difference with first non-orthologous sequence - A.darlingi:454 P.jiroveci:454

E3X2Q7              	100.00%		L0P9U3              	100.00%
Bootstrap support for E3X2Q7 as seed ortholog is 100%.
Bootstrap support for L0P9U3 as seed ortholog is 100%.

Group of orthologs #174. Best score 453 bits
Score difference with first non-orthologous sequence - A.darlingi:294 P.jiroveci:105

E3XBN4              	100.00%		L0P9V7              	100.00%
Bootstrap support for E3XBN4 as seed ortholog is 100%.
Bootstrap support for L0P9V7 as seed ortholog is 97%.

Group of orthologs #175. Best score 447 bits
Score difference with first non-orthologous sequence - A.darlingi:447 P.jiroveci:447

E3WZ45              	100.00%		L0PDM3              	100.00%
Bootstrap support for E3WZ45 as seed ortholog is 100%.
Bootstrap support for L0PDM3 as seed ortholog is 100%.

Group of orthologs #176. Best score 446 bits
Score difference with first non-orthologous sequence - A.darlingi:446 P.jiroveci:446

E3X2U2              	100.00%		L0PDU2              	100.00%
Bootstrap support for E3X2U2 as seed ortholog is 100%.
Bootstrap support for L0PDU2 as seed ortholog is 100%.

Group of orthologs #177. Best score 445 bits
Score difference with first non-orthologous sequence - A.darlingi:445 P.jiroveci:317

E3WPA6              	100.00%		L0PBI1              	100.00%
Bootstrap support for E3WPA6 as seed ortholog is 100%.
Bootstrap support for L0PBI1 as seed ortholog is 100%.

Group of orthologs #178. Best score 441 bits
Score difference with first non-orthologous sequence - A.darlingi:441 P.jiroveci:441

E3XG51              	100.00%		L0P7D2              	100.00%
Bootstrap support for E3XG51 as seed ortholog is 100%.
Bootstrap support for L0P7D2 as seed ortholog is 100%.

Group of orthologs #179. Best score 438 bits
Score difference with first non-orthologous sequence - A.darlingi:218 P.jiroveci:438

E3WKJ2              	100.00%		L0P905              	100.00%
E3WN05              	26.17%		
E3WKJ4              	21.61%		
E3WQJ7              	21.01%		
E3WTL6              	18.84%		
E3X1H0              	5.12%		
Bootstrap support for E3WKJ2 as seed ortholog is 99%.
Bootstrap support for L0P905 as seed ortholog is 100%.

Group of orthologs #180. Best score 437 bits
Score difference with first non-orthologous sequence - A.darlingi:301 P.jiroveci:212

E3X3G9              	100.00%		L0PEP2              	100.00%
Bootstrap support for E3X3G9 as seed ortholog is 100%.
Bootstrap support for L0PEP2 as seed ortholog is 99%.

Group of orthologs #181. Best score 436 bits
Score difference with first non-orthologous sequence - A.darlingi:436 P.jiroveci:49

E3X4T8              	100.00%		L0PFW2              	100.00%
Bootstrap support for E3X4T8 as seed ortholog is 100%.
Bootstrap support for L0PFW2 as seed ortholog is 90%.

Group of orthologs #182. Best score 435 bits
Score difference with first non-orthologous sequence - A.darlingi:168 P.jiroveci:435

E3WQD8              	100.00%		L0PF23              	100.00%
E3WS11              	15.13%		
Bootstrap support for E3WQD8 as seed ortholog is 99%.
Bootstrap support for L0PF23 as seed ortholog is 100%.

Group of orthologs #183. Best score 433 bits
Score difference with first non-orthologous sequence - A.darlingi:336 P.jiroveci:226

E3WLG8              	100.00%		L0PFB1              	100.00%
Bootstrap support for E3WLG8 as seed ortholog is 100%.
Bootstrap support for L0PFB1 as seed ortholog is 100%.

Group of orthologs #184. Best score 433 bits
Score difference with first non-orthologous sequence - A.darlingi:433 P.jiroveci:433

E3WVK1              	100.00%		L0PEQ8              	100.00%
Bootstrap support for E3WVK1 as seed ortholog is 100%.
Bootstrap support for L0PEQ8 as seed ortholog is 100%.

Group of orthologs #185. Best score 431 bits
Score difference with first non-orthologous sequence - A.darlingi:83 P.jiroveci:431

E3XFR7              	100.00%		L0P9G2              	100.00%
Bootstrap support for E3XFR7 as seed ortholog is 99%.
Bootstrap support for L0P9G2 as seed ortholog is 100%.

Group of orthologs #186. Best score 431 bits
Score difference with first non-orthologous sequence - A.darlingi:431 P.jiroveci:431

E3XCJ7              	100.00%		L0PCS3              	100.00%
Bootstrap support for E3XCJ7 as seed ortholog is 100%.
Bootstrap support for L0PCS3 as seed ortholog is 100%.

Group of orthologs #187. Best score 428 bits
Score difference with first non-orthologous sequence - A.darlingi:428 P.jiroveci:428

E3X0R8              	100.00%		L0P921              	100.00%
Bootstrap support for E3X0R8 as seed ortholog is 100%.
Bootstrap support for L0P921 as seed ortholog is 100%.

Group of orthologs #188. Best score 428 bits
Score difference with first non-orthologous sequence - A.darlingi:428 P.jiroveci:71

E3XDB7              	100.00%		L0PFS3              	100.00%
Bootstrap support for E3XDB7 as seed ortholog is 100%.
Bootstrap support for L0PFS3 as seed ortholog is 98%.

Group of orthologs #189. Best score 425 bits
Score difference with first non-orthologous sequence - A.darlingi:425 P.jiroveci:425

E3XEP6              	100.00%		L0P773              	100.00%
Bootstrap support for E3XEP6 as seed ortholog is 100%.
Bootstrap support for L0P773 as seed ortholog is 100%.

Group of orthologs #190. Best score 424 bits
Score difference with first non-orthologous sequence - A.darlingi:367 P.jiroveci:424

E3X705              	100.00%		L0P7N1              	100.00%
Bootstrap support for E3X705 as seed ortholog is 100%.
Bootstrap support for L0P7N1 as seed ortholog is 100%.

Group of orthologs #191. Best score 424 bits
Score difference with first non-orthologous sequence - A.darlingi:187 P.jiroveci:424

E3XEV8              	100.00%		L0PB68              	100.00%
Bootstrap support for E3XEV8 as seed ortholog is 100%.
Bootstrap support for L0PB68 as seed ortholog is 100%.

Group of orthologs #192. Best score 423 bits
Score difference with first non-orthologous sequence - A.darlingi:314 P.jiroveci:378

E3WIV6              	100.00%		L0P8C2              	100.00%
Bootstrap support for E3WIV6 as seed ortholog is 100%.
Bootstrap support for L0P8C2 as seed ortholog is 100%.

Group of orthologs #193. Best score 422 bits
Score difference with first non-orthologous sequence - A.darlingi:422 P.jiroveci:422

E3WZK4              	100.00%		L0PC65              	100.00%
Bootstrap support for E3WZK4 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #194. Best score 421 bits
Score difference with first non-orthologous sequence - A.darlingi:5 P.jiroveci:101

E3WNF9              	100.00%		L0PAW8              	100.00%
Bootstrap support for E3WNF9 as seed ortholog is 53%.
Alternative seed ortholog is E3X0G4 (5 bits away from this cluster)
Bootstrap support for L0PAW8 as seed ortholog is 97%.

Group of orthologs #195. Best score 421 bits
Score difference with first non-orthologous sequence - A.darlingi:218 P.jiroveci:311

E3X6F1              	100.00%		L0PEM1              	100.00%
Bootstrap support for E3X6F1 as seed ortholog is 100%.
Bootstrap support for L0PEM1 as seed ortholog is 100%.

Group of orthologs #196. Best score 418 bits
Score difference with first non-orthologous sequence - A.darlingi:138 P.jiroveci:225

E3WWF2              	100.00%		L0P8E8              	100.00%
                    	       		L0PEB0              	100.00%
Bootstrap support for E3WWF2 as seed ortholog is 99%.
Bootstrap support for L0P8E8 as seed ortholog is 100%.
Bootstrap support for L0PEB0 as seed ortholog is 100%.

Group of orthologs #197. Best score 417 bits
Score difference with first non-orthologous sequence - A.darlingi:417 P.jiroveci:417

E3WYT0              	100.00%		L0PCV8              	100.00%
Bootstrap support for E3WYT0 as seed ortholog is 100%.
Bootstrap support for L0PCV8 as seed ortholog is 100%.

Group of orthologs #198. Best score 416 bits
Score difference with first non-orthologous sequence - A.darlingi:416 P.jiroveci:416

E3WME0              	100.00%		L0P9C9              	100.00%
Bootstrap support for E3WME0 as seed ortholog is 100%.
Bootstrap support for L0P9C9 as seed ortholog is 100%.

Group of orthologs #199. Best score 416 bits
Score difference with first non-orthologous sequence - A.darlingi:416 P.jiroveci:416

E3X252              	100.00%		L0PFT7              	100.00%
Bootstrap support for E3X252 as seed ortholog is 100%.
Bootstrap support for L0PFT7 as seed ortholog is 100%.

Group of orthologs #200. Best score 415 bits
Score difference with first non-orthologous sequence - A.darlingi:96 P.jiroveci:253

E3X5P1              	100.00%		L0PGV4              	100.00%
Bootstrap support for E3X5P1 as seed ortholog is 99%.
Bootstrap support for L0PGV4 as seed ortholog is 100%.

Group of orthologs #201. Best score 414 bits
Score difference with first non-orthologous sequence - A.darlingi:414 P.jiroveci:414

E3X5C0              	100.00%		L0P9J7              	100.00%
Bootstrap support for E3X5C0 as seed ortholog is 100%.
Bootstrap support for L0P9J7 as seed ortholog is 100%.

Group of orthologs #202. Best score 412 bits
Score difference with first non-orthologous sequence - A.darlingi:412 P.jiroveci:357

E3XA70              	100.00%		L0P7M4              	100.00%
                    	       		L0PH62              	49.58%
Bootstrap support for E3XA70 as seed ortholog is 100%.
Bootstrap support for L0P7M4 as seed ortholog is 100%.

Group of orthologs #203. Best score 411 bits
Score difference with first non-orthologous sequence - A.darlingi:411 P.jiroveci:411

E3WKT7              	100.00%		L0PFZ9              	100.00%
Bootstrap support for E3WKT7 as seed ortholog is 100%.
Bootstrap support for L0PFZ9 as seed ortholog is 100%.

Group of orthologs #204. Best score 411 bits
Score difference with first non-orthologous sequence - A.darlingi:268 P.jiroveci:411

E3WPJ0              	100.00%		L0PCN1              	100.00%
Bootstrap support for E3WPJ0 as seed ortholog is 100%.
Bootstrap support for L0PCN1 as seed ortholog is 100%.

Group of orthologs #205. Best score 411 bits
Score difference with first non-orthologous sequence - A.darlingi:411 P.jiroveci:411

E3WNT2              	100.00%		L0PDJ1              	100.00%
Bootstrap support for E3WNT2 as seed ortholog is 100%.
Bootstrap support for L0PDJ1 as seed ortholog is 100%.

Group of orthologs #206. Best score 411 bits
Score difference with first non-orthologous sequence - A.darlingi:305 P.jiroveci:322

E3X3C3              	100.00%		L0PAL3              	100.00%
Bootstrap support for E3X3C3 as seed ortholog is 100%.
Bootstrap support for L0PAL3 as seed ortholog is 100%.

Group of orthologs #207. Best score 410 bits
Score difference with first non-orthologous sequence - A.darlingi:73 P.jiroveci:29

E3X5Q4              	100.00%		L0PE81              	100.00%
Bootstrap support for E3X5Q4 as seed ortholog is 91%.
Bootstrap support for L0PE81 as seed ortholog is 79%.

Group of orthologs #208. Best score 410 bits
Score difference with first non-orthologous sequence - A.darlingi:410 P.jiroveci:410

E3XFP2              	100.00%		L0PGU0              	100.00%
Bootstrap support for E3XFP2 as seed ortholog is 100%.
Bootstrap support for L0PGU0 as seed ortholog is 100%.

Group of orthologs #209. Best score 409 bits
Score difference with first non-orthologous sequence - A.darlingi:409 P.jiroveci:409

E3WW53              	100.00%		L0PG48              	100.00%
Bootstrap support for E3WW53 as seed ortholog is 100%.
Bootstrap support for L0PG48 as seed ortholog is 100%.

Group of orthologs #210. Best score 408 bits
Score difference with first non-orthologous sequence - A.darlingi:321 P.jiroveci:408

E3X928              	100.00%		L0P7T8              	100.00%
Bootstrap support for E3X928 as seed ortholog is 100%.
Bootstrap support for L0P7T8 as seed ortholog is 100%.

Group of orthologs #211. Best score 406 bits
Score difference with first non-orthologous sequence - A.darlingi:406 P.jiroveci:406

E3WRX8              	100.00%		L0PFD9              	100.00%
Bootstrap support for E3WRX8 as seed ortholog is 100%.
Bootstrap support for L0PFD9 as seed ortholog is 100%.

Group of orthologs #212. Best score 405 bits
Score difference with first non-orthologous sequence - A.darlingi:75 P.jiroveci:106

E3XAY4              	100.00%		L0PAY3              	100.00%
Bootstrap support for E3XAY4 as seed ortholog is 99%.
Bootstrap support for L0PAY3 as seed ortholog is 99%.

Group of orthologs #213. Best score 404 bits
Score difference with first non-orthologous sequence - A.darlingi:404 P.jiroveci:404

E3WJT0              	100.00%		L0PGJ5              	100.00%
Bootstrap support for E3WJT0 as seed ortholog is 100%.
Bootstrap support for L0PGJ5 as seed ortholog is 100%.

Group of orthologs #214. Best score 403 bits
Score difference with first non-orthologous sequence - A.darlingi:181 P.jiroveci:250

E3WPT4              	100.00%		L0PC38              	100.00%
Bootstrap support for E3WPT4 as seed ortholog is 99%.
Bootstrap support for L0PC38 as seed ortholog is 100%.

Group of orthologs #215. Best score 403 bits
Score difference with first non-orthologous sequence - A.darlingi:352 P.jiroveci:300

E3X469              	100.00%		L0P7S7              	100.00%
Bootstrap support for E3X469 as seed ortholog is 100%.
Bootstrap support for L0P7S7 as seed ortholog is 100%.

Group of orthologs #216. Best score 403 bits
Score difference with first non-orthologous sequence - A.darlingi:403 P.jiroveci:403

E3WXR9              	100.00%		L0PFY1              	100.00%
Bootstrap support for E3WXR9 as seed ortholog is 100%.
Bootstrap support for L0PFY1 as seed ortholog is 100%.

Group of orthologs #217. Best score 401 bits
Score difference with first non-orthologous sequence - A.darlingi:401 P.jiroveci:401

E3WSC6              	100.00%		L0PI13              	100.00%
E3X2A2              	25.65%		
Bootstrap support for E3WSC6 as seed ortholog is 100%.
Bootstrap support for L0PI13 as seed ortholog is 100%.

Group of orthologs #218. Best score 401 bits
Score difference with first non-orthologous sequence - A.darlingi:401 P.jiroveci:401

E3WX13              	100.00%		L0PEE3              	100.00%
Bootstrap support for E3WX13 as seed ortholog is 100%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #219. Best score 399 bits
Score difference with first non-orthologous sequence - A.darlingi:174 P.jiroveci:399

E3X138              	100.00%		L0PBF6              	100.00%
Bootstrap support for E3X138 as seed ortholog is 100%.
Bootstrap support for L0PBF6 as seed ortholog is 100%.

Group of orthologs #220. Best score 396 bits
Score difference with first non-orthologous sequence - A.darlingi:123 P.jiroveci:163

E3WLG2              	100.00%		L0P6U6              	100.00%
Bootstrap support for E3WLG2 as seed ortholog is 99%.
Bootstrap support for L0P6U6 as seed ortholog is 99%.

Group of orthologs #221. Best score 396 bits
Score difference with first non-orthologous sequence - A.darlingi:396 P.jiroveci:396

E3XF37              	100.00%		L0P8Z3              	100.00%
Bootstrap support for E3XF37 as seed ortholog is 100%.
Bootstrap support for L0P8Z3 as seed ortholog is 100%.

Group of orthologs #222. Best score 394 bits
Score difference with first non-orthologous sequence - A.darlingi:394 P.jiroveci:394

E3X2D2              	100.00%		L0PBE9              	100.00%
Bootstrap support for E3X2D2 as seed ortholog is 100%.
Bootstrap support for L0PBE9 as seed ortholog is 100%.

Group of orthologs #223. Best score 394 bits
Score difference with first non-orthologous sequence - A.darlingi:213 P.jiroveci:1

E3X978              	100.00%		L0PAI4              	100.00%
Bootstrap support for E3X978 as seed ortholog is 99%.
Bootstrap support for L0PAI4 as seed ortholog is 51%.
Alternative seed ortholog is L0PEY0 (1 bits away from this cluster)

Group of orthologs #224. Best score 393 bits
Score difference with first non-orthologous sequence - A.darlingi:393 P.jiroveci:393

E3XC37              	100.00%		L0PCQ7              	100.00%
Bootstrap support for E3XC37 as seed ortholog is 100%.
Bootstrap support for L0PCQ7 as seed ortholog is 100%.

Group of orthologs #225. Best score 391 bits
Score difference with first non-orthologous sequence - A.darlingi:267 P.jiroveci:289

E3WM89              	100.00%		L0PFE7              	100.00%
Bootstrap support for E3WM89 as seed ortholog is 100%.
Bootstrap support for L0PFE7 as seed ortholog is 100%.

Group of orthologs #226. Best score 390 bits
Score difference with first non-orthologous sequence - A.darlingi:390 P.jiroveci:390

E3X668              	100.00%		L0PGA8              	100.00%
Bootstrap support for E3X668 as seed ortholog is 100%.
Bootstrap support for L0PGA8 as seed ortholog is 100%.

Group of orthologs #227. Best score 388 bits
Score difference with first non-orthologous sequence - A.darlingi:231 P.jiroveci:301

E3X1D0              	100.00%		L0PDA0              	100.00%
Bootstrap support for E3X1D0 as seed ortholog is 100%.
Bootstrap support for L0PDA0 as seed ortholog is 100%.

Group of orthologs #228. Best score 387 bits
Score difference with first non-orthologous sequence - A.darlingi:387 P.jiroveci:387

E3X4U8              	100.00%		L0PFQ8              	100.00%
Bootstrap support for E3X4U8 as seed ortholog is 100%.
Bootstrap support for L0PFQ8 as seed ortholog is 100%.

Group of orthologs #229. Best score 386 bits
Score difference with first non-orthologous sequence - A.darlingi:386 P.jiroveci:186

E3WK05              	100.00%		L0PBH4              	100.00%
Bootstrap support for E3WK05 as seed ortholog is 100%.
Bootstrap support for L0PBH4 as seed ortholog is 98%.

Group of orthologs #230. Best score 383 bits
Score difference with first non-orthologous sequence - A.darlingi:383 P.jiroveci:383

E3XFQ3              	100.00%		L0P7Z6              	100.00%
Bootstrap support for E3XFQ3 as seed ortholog is 100%.
Bootstrap support for L0P7Z6 as seed ortholog is 100%.

Group of orthologs #231. Best score 381 bits
Score difference with first non-orthologous sequence - A.darlingi:381 P.jiroveci:381

E3XA56              	100.00%		L0PEX5              	100.00%
Bootstrap support for E3XA56 as seed ortholog is 100%.
Bootstrap support for L0PEX5 as seed ortholog is 100%.

Group of orthologs #232. Best score 376 bits
Score difference with first non-orthologous sequence - A.darlingi:317 P.jiroveci:293

E3WYL5              	100.00%		L0PBY2              	100.00%
E3WZ11              	38.40%		
Bootstrap support for E3WYL5 as seed ortholog is 100%.
Bootstrap support for L0PBY2 as seed ortholog is 100%.

Group of orthologs #233. Best score 376 bits
Score difference with first non-orthologous sequence - A.darlingi:376 P.jiroveci:376

E3X1G1              	100.00%		L0PCR5              	100.00%
                    	       		L0P9C2              	56.48%
Bootstrap support for E3X1G1 as seed ortholog is 100%.
Bootstrap support for L0PCR5 as seed ortholog is 100%.

Group of orthologs #234. Best score 376 bits
Score difference with first non-orthologous sequence - A.darlingi:376 P.jiroveci:376

B6DDR9              	100.00%		L0PID0              	100.00%
Bootstrap support for B6DDR9 as seed ortholog is 100%.
Bootstrap support for L0PID0 as seed ortholog is 100%.

Group of orthologs #235. Best score 375 bits
Score difference with first non-orthologous sequence - A.darlingi:375 P.jiroveci:375

E3X0R9              	100.00%		L0P7L7              	100.00%
Bootstrap support for E3X0R9 as seed ortholog is 100%.
Bootstrap support for L0P7L7 as seed ortholog is 100%.

Group of orthologs #236. Best score 374 bits
Score difference with first non-orthologous sequence - A.darlingi:104 P.jiroveci:374

E3X611              	100.00%		L0PE41              	100.00%
Bootstrap support for E3X611 as seed ortholog is 81%.
Bootstrap support for L0PE41 as seed ortholog is 100%.

Group of orthologs #237. Best score 369 bits
Score difference with first non-orthologous sequence - A.darlingi:248 P.jiroveci:305

E3WUX1              	100.00%		L0P942              	100.00%
                    	       		L0P7J6              	58.91%
Bootstrap support for E3WUX1 as seed ortholog is 100%.
Bootstrap support for L0P942 as seed ortholog is 100%.

Group of orthologs #238. Best score 367 bits
Score difference with first non-orthologous sequence - A.darlingi:367 P.jiroveci:367

E3WQZ4              	100.00%		L0PCH8              	100.00%
Bootstrap support for E3WQZ4 as seed ortholog is 100%.
Bootstrap support for L0PCH8 as seed ortholog is 100%.

Group of orthologs #239. Best score 366 bits
Score difference with first non-orthologous sequence - A.darlingi:366 P.jiroveci:366

E3XFV9              	100.00%		L0PAH9              	100.00%
                    	       		L0PAZ7              	32.90%
Bootstrap support for E3XFV9 as seed ortholog is 100%.
Bootstrap support for L0PAH9 as seed ortholog is 100%.

Group of orthologs #240. Best score 366 bits
Score difference with first non-orthologous sequence - A.darlingi:366 P.jiroveci:366

E3XBC4              	100.00%		L0PAL6              	100.00%
Bootstrap support for E3XBC4 as seed ortholog is 100%.
Bootstrap support for L0PAL6 as seed ortholog is 100%.

Group of orthologs #241. Best score 363 bits
Score difference with first non-orthologous sequence - A.darlingi:157 P.jiroveci:363

E3WWG2              	100.00%		L0P6W8              	100.00%
                    	       		L0PH46              	100.00%
Bootstrap support for E3WWG2 as seed ortholog is 99%.
Bootstrap support for L0P6W8 as seed ortholog is 100%.
Bootstrap support for L0PH46 as seed ortholog is 100%.

Group of orthologs #242. Best score 363 bits
Score difference with first non-orthologous sequence - A.darlingi:363 P.jiroveci:363

E3X9I3              	100.00%		L0PEE4              	100.00%
Bootstrap support for E3X9I3 as seed ortholog is 100%.
Bootstrap support for L0PEE4 as seed ortholog is 100%.

Group of orthologs #243. Best score 357 bits
Score difference with first non-orthologous sequence - A.darlingi:357 P.jiroveci:357

E3WP12              	100.00%		L0P9I4              	100.00%
Bootstrap support for E3WP12 as seed ortholog is 100%.
Bootstrap support for L0P9I4 as seed ortholog is 100%.

Group of orthologs #244. Best score 357 bits
Score difference with first non-orthologous sequence - A.darlingi:357 P.jiroveci:120

E3X8M1              	100.00%		L0PD82              	100.00%
Bootstrap support for E3X8M1 as seed ortholog is 100%.
Bootstrap support for L0PD82 as seed ortholog is 99%.

Group of orthologs #245. Best score 356 bits
Score difference with first non-orthologous sequence - A.darlingi:214 P.jiroveci:356

E3X3E3              	100.00%		L0PCP3              	100.00%
Bootstrap support for E3X3E3 as seed ortholog is 100%.
Bootstrap support for L0PCP3 as seed ortholog is 100%.

Group of orthologs #246. Best score 354 bits
Score difference with first non-orthologous sequence - A.darlingi:90 P.jiroveci:354

E3WZ23              	100.00%		L0PBA8              	100.00%
Bootstrap support for E3WZ23 as seed ortholog is 99%.
Bootstrap support for L0PBA8 as seed ortholog is 100%.

Group of orthologs #247. Best score 354 bits
Score difference with first non-orthologous sequence - A.darlingi:292 P.jiroveci:354

E3X1E0              	100.00%		L0PBN1              	100.00%
Bootstrap support for E3X1E0 as seed ortholog is 100%.
Bootstrap support for L0PBN1 as seed ortholog is 100%.

Group of orthologs #248. Best score 354 bits
Score difference with first non-orthologous sequence - A.darlingi:286 P.jiroveci:354

E3XDI3              	100.00%		L0P8G8              	100.00%
Bootstrap support for E3XDI3 as seed ortholog is 100%.
Bootstrap support for L0P8G8 as seed ortholog is 100%.

Group of orthologs #249. Best score 352 bits
Score difference with first non-orthologous sequence - A.darlingi:352 P.jiroveci:352

E3WKK3              	100.00%		L0PAU1              	100.00%
Bootstrap support for E3WKK3 as seed ortholog is 100%.
Bootstrap support for L0PAU1 as seed ortholog is 100%.

Group of orthologs #250. Best score 351 bits
Score difference with first non-orthologous sequence - A.darlingi:351 P.jiroveci:351

E3XF07              	100.00%		L0PIN5              	100.00%
                    	       		L0PE52              	90.48%
Bootstrap support for E3XF07 as seed ortholog is 100%.
Bootstrap support for L0PIN5 as seed ortholog is 100%.

Group of orthologs #251. Best score 350 bits
Score difference with first non-orthologous sequence - A.darlingi:350 P.jiroveci:350

E3X2Y7              	100.00%		L0PGC4              	100.00%
Bootstrap support for E3X2Y7 as seed ortholog is 100%.
Bootstrap support for L0PGC4 as seed ortholog is 100%.

Group of orthologs #252. Best score 349 bits
Score difference with first non-orthologous sequence - A.darlingi:214 P.jiroveci:349

E3WL08              	100.00%		L0P8N1              	100.00%
Bootstrap support for E3WL08 as seed ortholog is 100%.
Bootstrap support for L0P8N1 as seed ortholog is 100%.

Group of orthologs #253. Best score 349 bits
Score difference with first non-orthologous sequence - A.darlingi:349 P.jiroveci:349

E3XF56              	100.00%		L0P8A6              	100.00%
Bootstrap support for E3XF56 as seed ortholog is 100%.
Bootstrap support for L0P8A6 as seed ortholog is 100%.

Group of orthologs #254. Best score 348 bits
Score difference with first non-orthologous sequence - A.darlingi:348 P.jiroveci:348

E3WYJ0              	100.00%		L0PBC5              	100.00%
E3X5N7              	33.24%		
Bootstrap support for E3WYJ0 as seed ortholog is 100%.
Bootstrap support for L0PBC5 as seed ortholog is 100%.

Group of orthologs #255. Best score 348 bits
Score difference with first non-orthologous sequence - A.darlingi:80 P.jiroveci:348

E3XB64              	100.00%		L0PA09              	100.00%
Bootstrap support for E3XB64 as seed ortholog is 98%.
Bootstrap support for L0PA09 as seed ortholog is 100%.

Group of orthologs #256. Best score 346 bits
Score difference with first non-orthologous sequence - A.darlingi:266 P.jiroveci:282

E3XEI0              	100.00%		L0PA57              	100.00%
Bootstrap support for E3XEI0 as seed ortholog is 100%.
Bootstrap support for L0PA57 as seed ortholog is 100%.

Group of orthologs #257. Best score 344 bits
Score difference with first non-orthologous sequence - A.darlingi:109 P.jiroveci:344

E3WPD3              	100.00%		L0P9Y8              	100.00%
Bootstrap support for E3WPD3 as seed ortholog is 99%.
Bootstrap support for L0P9Y8 as seed ortholog is 100%.

Group of orthologs #258. Best score 344 bits
Score difference with first non-orthologous sequence - A.darlingi:344 P.jiroveci:344

E3WL30              	100.00%		L0PG37              	100.00%
Bootstrap support for E3WL30 as seed ortholog is 100%.
Bootstrap support for L0PG37 as seed ortholog is 100%.

Group of orthologs #259. Best score 344 bits
Score difference with first non-orthologous sequence - A.darlingi:344 P.jiroveci:344

E3WXX9              	100.00%		L0PEY9              	100.00%
Bootstrap support for E3WXX9 as seed ortholog is 100%.
Bootstrap support for L0PEY9 as seed ortholog is 100%.

Group of orthologs #260. Best score 341 bits
Score difference with first non-orthologous sequence - A.darlingi:341 P.jiroveci:341

E3X5B3              	100.00%		L0PAU5              	100.00%
Bootstrap support for E3X5B3 as seed ortholog is 100%.
Bootstrap support for L0PAU5 as seed ortholog is 100%.

Group of orthologs #261. Best score 340 bits
Score difference with first non-orthologous sequence - A.darlingi:340 P.jiroveci:147

E3X552              	100.00%		L0PEA7              	100.00%
Bootstrap support for E3X552 as seed ortholog is 100%.
Bootstrap support for L0PEA7 as seed ortholog is 99%.

Group of orthologs #262. Best score 340 bits
Score difference with first non-orthologous sequence - A.darlingi:340 P.jiroveci:340

E3XCY6              	100.00%		L0PCL9              	100.00%
Bootstrap support for E3XCY6 as seed ortholog is 100%.
Bootstrap support for L0PCL9 as seed ortholog is 100%.

Group of orthologs #263. Best score 339 bits
Score difference with first non-orthologous sequence - A.darlingi:339 P.jiroveci:223

E3WJ00              	100.00%		L0PA00              	100.00%
Bootstrap support for E3WJ00 as seed ortholog is 100%.
Bootstrap support for L0PA00 as seed ortholog is 100%.

Group of orthologs #264. Best score 339 bits
Score difference with first non-orthologous sequence - A.darlingi:339 P.jiroveci:339

E3WN72              	100.00%		L0PDI1              	100.00%
Bootstrap support for E3WN72 as seed ortholog is 100%.
Bootstrap support for L0PDI1 as seed ortholog is 100%.

Group of orthologs #265. Best score 338 bits
Score difference with first non-orthologous sequence - A.darlingi:272 P.jiroveci:163

E3WMF8              	100.00%		L0PCJ5              	100.00%
Bootstrap support for E3WMF8 as seed ortholog is 100%.
Bootstrap support for L0PCJ5 as seed ortholog is 99%.

Group of orthologs #266. Best score 338 bits
Score difference with first non-orthologous sequence - A.darlingi:185 P.jiroveci:80

E3WP11              	100.00%		L0PGJ9              	100.00%
Bootstrap support for E3WP11 as seed ortholog is 100%.
Bootstrap support for L0PGJ9 as seed ortholog is 95%.

Group of orthologs #267. Best score 338 bits
Score difference with first non-orthologous sequence - A.darlingi:338 P.jiroveci:338

E3X1L1              	100.00%		L0P9U8              	100.00%
Bootstrap support for E3X1L1 as seed ortholog is 100%.
Bootstrap support for L0P9U8 as seed ortholog is 100%.

Group of orthologs #268. Best score 337 bits
Score difference with first non-orthologous sequence - A.darlingi:337 P.jiroveci:337

E3XA51              	100.00%		L0PFM4              	100.00%
Bootstrap support for E3XA51 as seed ortholog is 100%.
Bootstrap support for L0PFM4 as seed ortholog is 100%.

Group of orthologs #269. Best score 336 bits
Score difference with first non-orthologous sequence - A.darlingi:336 P.jiroveci:336

E3XAC4              	100.00%		L0PDC7              	100.00%
Bootstrap support for E3XAC4 as seed ortholog is 100%.
Bootstrap support for L0PDC7 as seed ortholog is 100%.

Group of orthologs #270. Best score 335 bits
Score difference with first non-orthologous sequence - A.darlingi:259 P.jiroveci:278

E3WRR4              	100.00%		L0PEF5              	100.00%
Bootstrap support for E3WRR4 as seed ortholog is 100%.
Bootstrap support for L0PEF5 as seed ortholog is 100%.

Group of orthologs #271. Best score 334 bits
Score difference with first non-orthologous sequence - A.darlingi:334 P.jiroveci:334

E3XAX1              	100.00%		L0PA65              	100.00%
Bootstrap support for E3XAX1 as seed ortholog is 100%.
Bootstrap support for L0PA65 as seed ortholog is 100%.

Group of orthologs #272. Best score 333 bits
Score difference with first non-orthologous sequence - A.darlingi:102 P.jiroveci:111

E3WS82              	100.00%		L0PF10              	100.00%
Bootstrap support for E3WS82 as seed ortholog is 99%.
Bootstrap support for L0PF10 as seed ortholog is 99%.

Group of orthologs #273. Best score 330 bits
Score difference with first non-orthologous sequence - A.darlingi:330 P.jiroveci:330

E3X520              	100.00%		L0PCB2              	100.00%
Bootstrap support for E3X520 as seed ortholog is 100%.
Bootstrap support for L0PCB2 as seed ortholog is 100%.

Group of orthologs #274. Best score 329 bits
Score difference with first non-orthologous sequence - A.darlingi:155 P.jiroveci:138

E3WP69              	100.00%		L0P9K4              	100.00%
Bootstrap support for E3WP69 as seed ortholog is 99%.
Bootstrap support for L0P9K4 as seed ortholog is 99%.

Group of orthologs #275. Best score 328 bits
Score difference with first non-orthologous sequence - A.darlingi:53 P.jiroveci:328

E3WLQ9              	100.00%		L0PCQ8              	100.00%
Bootstrap support for E3WLQ9 as seed ortholog is 93%.
Bootstrap support for L0PCQ8 as seed ortholog is 100%.

Group of orthologs #276. Best score 328 bits
Score difference with first non-orthologous sequence - A.darlingi:169 P.jiroveci:328

E3WWD2              	100.00%		L0PE19              	100.00%
Bootstrap support for E3WWD2 as seed ortholog is 100%.
Bootstrap support for L0PE19 as seed ortholog is 100%.

Group of orthologs #277. Best score 327 bits
Score difference with first non-orthologous sequence - A.darlingi:140 P.jiroveci:327

E3WQ06              	100.00%		L0PD18              	100.00%
Bootstrap support for E3WQ06 as seed ortholog is 99%.
Bootstrap support for L0PD18 as seed ortholog is 100%.

Group of orthologs #278. Best score 327 bits
Score difference with first non-orthologous sequence - A.darlingi:327 P.jiroveci:327

E3XCS5              	100.00%		L0PES3              	100.00%
Bootstrap support for E3XCS5 as seed ortholog is 100%.
Bootstrap support for L0PES3 as seed ortholog is 100%.

Group of orthologs #279. Best score 326 bits
Score difference with first non-orthologous sequence - A.darlingi:215 P.jiroveci:326

E3WVF1              	100.00%		L0PHI3              	100.00%
Bootstrap support for E3WVF1 as seed ortholog is 99%.
Bootstrap support for L0PHI3 as seed ortholog is 100%.

Group of orthologs #280. Best score 324 bits
Score difference with first non-orthologous sequence - A.darlingi:91 P.jiroveci:324

E3WP58              	100.00%		L0PBU4              	100.00%
Bootstrap support for E3WP58 as seed ortholog is 99%.
Bootstrap support for L0PBU4 as seed ortholog is 100%.

Group of orthologs #281. Best score 324 bits
Score difference with first non-orthologous sequence - A.darlingi:324 P.jiroveci:324

E3X813              	100.00%		L0PF30              	100.00%
Bootstrap support for E3X813 as seed ortholog is 100%.
Bootstrap support for L0PF30 as seed ortholog is 100%.

Group of orthologs #282. Best score 324 bits
Score difference with first non-orthologous sequence - A.darlingi:324 P.jiroveci:324

E3XF31              	100.00%		L0PCG4              	100.00%
Bootstrap support for E3XF31 as seed ortholog is 100%.
Bootstrap support for L0PCG4 as seed ortholog is 100%.

Group of orthologs #283. Best score 324 bits
Score difference with first non-orthologous sequence - A.darlingi:324 P.jiroveci:324

E3XFF2              	100.00%		L0PG82              	100.00%
Bootstrap support for E3XFF2 as seed ortholog is 100%.
Bootstrap support for L0PG82 as seed ortholog is 100%.

Group of orthologs #284. Best score 322 bits
Score difference with first non-orthologous sequence - A.darlingi:51 P.jiroveci:322

E3X529              	100.00%		L0PFJ5              	100.00%
Bootstrap support for E3X529 as seed ortholog is 83%.
Bootstrap support for L0PFJ5 as seed ortholog is 100%.

Group of orthologs #285. Best score 321 bits
Score difference with first non-orthologous sequence - A.darlingi:173 P.jiroveci:175

E3XED4              	100.00%		L0P9H5              	100.00%
                    	       		L0P8S4              	56.71%
Bootstrap support for E3XED4 as seed ortholog is 99%.
Bootstrap support for L0P9H5 as seed ortholog is 99%.

Group of orthologs #286. Best score 321 bits
Score difference with first non-orthologous sequence - A.darlingi:58 P.jiroveci:321

E3XFQ2              	100.00%		L0PGR0              	100.00%
Bootstrap support for E3XFQ2 as seed ortholog is 85%.
Bootstrap support for L0PGR0 as seed ortholog is 100%.

Group of orthologs #287. Best score 318 bits
Score difference with first non-orthologous sequence - A.darlingi:318 P.jiroveci:318

E3WZI9              	100.00%		L0PAP4              	100.00%
Bootstrap support for E3WZI9 as seed ortholog is 100%.
Bootstrap support for L0PAP4 as seed ortholog is 100%.

Group of orthologs #288. Best score 317 bits
Score difference with first non-orthologous sequence - A.darlingi:317 P.jiroveci:317

E3WQZ5              	100.00%		L0PDF2              	100.00%
Bootstrap support for E3WQZ5 as seed ortholog is 100%.
Bootstrap support for L0PDF2 as seed ortholog is 100%.

Group of orthologs #289. Best score 316 bits
Score difference with first non-orthologous sequence - A.darlingi:213 P.jiroveci:316

E3X1F8              	100.00%		L0PBM9              	100.00%
Bootstrap support for E3X1F8 as seed ortholog is 99%.
Bootstrap support for L0PBM9 as seed ortholog is 100%.

Group of orthologs #290. Best score 316 bits
Score difference with first non-orthologous sequence - A.darlingi:316 P.jiroveci:316

E3X714              	100.00%		L0PD03              	100.00%
Bootstrap support for E3X714 as seed ortholog is 100%.
Bootstrap support for L0PD03 as seed ortholog is 100%.

Group of orthologs #291. Best score 316 bits
Score difference with first non-orthologous sequence - A.darlingi:316 P.jiroveci:316

E3X7K8              	100.00%		L0PFI2              	100.00%
Bootstrap support for E3X7K8 as seed ortholog is 100%.
Bootstrap support for L0PFI2 as seed ortholog is 100%.

Group of orthologs #292. Best score 314 bits
Score difference with first non-orthologous sequence - A.darlingi:314 P.jiroveci:314

E3WPU0              	100.00%		L0PDY1              	100.00%
E3WPT7              	28.68%		
Bootstrap support for E3WPU0 as seed ortholog is 100%.
Bootstrap support for L0PDY1 as seed ortholog is 100%.

Group of orthologs #293. Best score 314 bits
Score difference with first non-orthologous sequence - A.darlingi:217 P.jiroveci:314

E3WTY9              	100.00%		L0P7P4              	100.00%
Bootstrap support for E3WTY9 as seed ortholog is 100%.
Bootstrap support for L0P7P4 as seed ortholog is 100%.

Group of orthologs #294. Best score 314 bits
Score difference with first non-orthologous sequence - A.darlingi:314 P.jiroveci:314

E3X769              	100.00%		L0P9B4              	100.00%
Bootstrap support for E3X769 as seed ortholog is 100%.
Bootstrap support for L0P9B4 as seed ortholog is 100%.

Group of orthologs #295. Best score 314 bits
Score difference with first non-orthologous sequence - A.darlingi:314 P.jiroveci:314

E3X6J4              	100.00%		L0PBP4              	100.00%
Bootstrap support for E3X6J4 as seed ortholog is 100%.
Bootstrap support for L0PBP4 as seed ortholog is 100%.

Group of orthologs #296. Best score 313 bits
Score difference with first non-orthologous sequence - A.darlingi:204 P.jiroveci:313

E3WR17              	100.00%		L0PFE9              	100.00%
Bootstrap support for E3WR17 as seed ortholog is 99%.
Bootstrap support for L0PFE9 as seed ortholog is 100%.

Group of orthologs #297. Best score 312 bits
Score difference with first non-orthologous sequence - A.darlingi:312 P.jiroveci:312

E3WKE0              	100.00%		L0PAF9              	100.00%
Bootstrap support for E3WKE0 as seed ortholog is 100%.
Bootstrap support for L0PAF9 as seed ortholog is 100%.

Group of orthologs #298. Best score 312 bits
Score difference with first non-orthologous sequence - A.darlingi:312 P.jiroveci:312

E3X248              	100.00%		L0PA88              	100.00%
Bootstrap support for E3X248 as seed ortholog is 100%.
Bootstrap support for L0PA88 as seed ortholog is 100%.

Group of orthologs #299. Best score 310 bits
Score difference with first non-orthologous sequence - A.darlingi:310 P.jiroveci:310

E3XDJ1              	100.00%		L0PG01              	100.00%
                    	       		L0P7J0              	82.38%
Bootstrap support for E3XDJ1 as seed ortholog is 100%.
Bootstrap support for L0PG01 as seed ortholog is 100%.

Group of orthologs #300. Best score 310 bits
Score difference with first non-orthologous sequence - A.darlingi:310 P.jiroveci:310

E3WVU2              	100.00%		L0P9X4              	100.00%
Bootstrap support for E3WVU2 as seed ortholog is 100%.
Bootstrap support for L0P9X4 as seed ortholog is 100%.

Group of orthologs #301. Best score 307 bits
Score difference with first non-orthologous sequence - A.darlingi:307 P.jiroveci:307

E3WTP3              	100.00%		L0P7I8              	100.00%
Bootstrap support for E3WTP3 as seed ortholog is 100%.
Bootstrap support for L0P7I8 as seed ortholog is 100%.

Group of orthologs #302. Best score 307 bits
Score difference with first non-orthologous sequence - A.darlingi:307 P.jiroveci:307

E3WSU5              	100.00%		L0PDI6              	100.00%
Bootstrap support for E3WSU5 as seed ortholog is 100%.
Bootstrap support for L0PDI6 as seed ortholog is 100%.

Group of orthologs #303. Best score 306 bits
Score difference with first non-orthologous sequence - A.darlingi:245 P.jiroveci:187

E3WKC3              	100.00%		L0PDV0              	100.00%
Bootstrap support for E3WKC3 as seed ortholog is 100%.
Bootstrap support for L0PDV0 as seed ortholog is 99%.

Group of orthologs #304. Best score 305 bits
Score difference with first non-orthologous sequence - A.darlingi:305 P.jiroveci:305

E3X2D3              	100.00%		L0PD17              	100.00%
Bootstrap support for E3X2D3 as seed ortholog is 100%.
Bootstrap support for L0PD17 as seed ortholog is 100%.

Group of orthologs #305. Best score 304 bits
Score difference with first non-orthologous sequence - A.darlingi:116 P.jiroveci:304

E3X331              	100.00%		L0P7X9              	100.00%
E3XBP8              	10.02%		L0PBE2              	81.71%
Bootstrap support for E3X331 as seed ortholog is 97%.
Bootstrap support for L0P7X9 as seed ortholog is 100%.

Group of orthologs #306. Best score 304 bits
Score difference with first non-orthologous sequence - A.darlingi:304 P.jiroveci:304

E3WXC2              	100.00%		L0PDZ2              	100.00%
Bootstrap support for E3WXC2 as seed ortholog is 100%.
Bootstrap support for L0PDZ2 as seed ortholog is 100%.

Group of orthologs #307. Best score 303 bits
Score difference with first non-orthologous sequence - A.darlingi:303 P.jiroveci:303

E3WTX3              	100.00%		L0PFC9              	100.00%
Bootstrap support for E3WTX3 as seed ortholog is 100%.
Bootstrap support for L0PFC9 as seed ortholog is 100%.

Group of orthologs #308. Best score 302 bits
Score difference with first non-orthologous sequence - A.darlingi:302 P.jiroveci:302

E3X0U7              	100.00%		L0PEZ2              	100.00%
                    	       		L0PH30              	100.00%
Bootstrap support for E3X0U7 as seed ortholog is 100%.
Bootstrap support for L0PEZ2 as seed ortholog is 100%.
Bootstrap support for L0PH30 as seed ortholog is 100%.

Group of orthologs #309. Best score 302 bits
Score difference with first non-orthologous sequence - A.darlingi:302 P.jiroveci:302

E3WJ92              	100.00%		L0P8Z9              	100.00%
Bootstrap support for E3WJ92 as seed ortholog is 100%.
Bootstrap support for L0P8Z9 as seed ortholog is 100%.

Group of orthologs #310. Best score 302 bits
Score difference with first non-orthologous sequence - A.darlingi:302 P.jiroveci:302

E3WPI9              	100.00%		L0PAG0              	100.00%
Bootstrap support for E3WPI9 as seed ortholog is 100%.
Bootstrap support for L0PAG0 as seed ortholog is 100%.

Group of orthologs #311. Best score 302 bits
Score difference with first non-orthologous sequence - A.darlingi:302 P.jiroveci:302

E3X850              	100.00%		L0P8N3              	100.00%
Bootstrap support for E3X850 as seed ortholog is 100%.
Bootstrap support for L0P8N3 as seed ortholog is 100%.

Group of orthologs #312. Best score 301 bits
Score difference with first non-orthologous sequence - A.darlingi:99 P.jiroveci:301

E3XBN8              	100.00%		L0P891              	100.00%
Bootstrap support for E3XBN8 as seed ortholog is 100%.
Bootstrap support for L0P891 as seed ortholog is 100%.

Group of orthologs #313. Best score 300 bits
Score difference with first non-orthologous sequence - A.darlingi:250 P.jiroveci:300

E3X7W8              	100.00%		L0PB00              	100.00%
Bootstrap support for E3X7W8 as seed ortholog is 100%.
Bootstrap support for L0PB00 as seed ortholog is 100%.

Group of orthologs #314. Best score 295 bits
Score difference with first non-orthologous sequence - A.darlingi:295 P.jiroveci:295

E3WJ89              	100.00%		L0PBQ9              	100.00%
Bootstrap support for E3WJ89 as seed ortholog is 100%.
Bootstrap support for L0PBQ9 as seed ortholog is 100%.

Group of orthologs #315. Best score 295 bits
Score difference with first non-orthologous sequence - A.darlingi:236 P.jiroveci:295

E3WKF3              	100.00%		L0PDL9              	100.00%
Bootstrap support for E3WKF3 as seed ortholog is 100%.
Bootstrap support for L0PDL9 as seed ortholog is 100%.

Group of orthologs #316. Best score 294 bits
Score difference with first non-orthologous sequence - A.darlingi:294 P.jiroveci:294

E3XAF1              	100.00%		L0P8N0              	100.00%
Bootstrap support for E3XAF1 as seed ortholog is 100%.
Bootstrap support for L0P8N0 as seed ortholog is 100%.

Group of orthologs #317. Best score 293 bits
Score difference with first non-orthologous sequence - A.darlingi:293 P.jiroveci:293

E3WK95              	100.00%		L0P9X7              	100.00%
Bootstrap support for E3WK95 as seed ortholog is 100%.
Bootstrap support for L0P9X7 as seed ortholog is 100%.

Group of orthologs #318. Best score 292 bits
Score difference with first non-orthologous sequence - A.darlingi:292 P.jiroveci:292

E3WLH5              	100.00%		L0P9G9              	100.00%
Bootstrap support for E3WLH5 as seed ortholog is 100%.
Bootstrap support for L0P9G9 as seed ortholog is 100%.

Group of orthologs #319. Best score 292 bits
Score difference with first non-orthologous sequence - A.darlingi:292 P.jiroveci:292

E3WQM1              	100.00%		L0PCV1              	100.00%
Bootstrap support for E3WQM1 as seed ortholog is 100%.
Bootstrap support for L0PCV1 as seed ortholog is 100%.

Group of orthologs #320. Best score 292 bits
Score difference with first non-orthologous sequence - A.darlingi:59 P.jiroveci:159

E3X1H3              	100.00%		L0P9Z0              	100.00%
Bootstrap support for E3X1H3 as seed ortholog is 91%.
Bootstrap support for L0P9Z0 as seed ortholog is 99%.

Group of orthologs #321. Best score 291 bits
Score difference with first non-orthologous sequence - A.darlingi:291 P.jiroveci:291

E3WZQ8              	100.00%		L0PC62              	100.00%
Bootstrap support for E3WZQ8 as seed ortholog is 100%.
Bootstrap support for L0PC62 as seed ortholog is 100%.

Group of orthologs #322. Best score 291 bits
Score difference with first non-orthologous sequence - A.darlingi:291 P.jiroveci:291

E3XEP5              	100.00%		L0P8W7              	100.00%
Bootstrap support for E3XEP5 as seed ortholog is 100%.
Bootstrap support for L0P8W7 as seed ortholog is 100%.

Group of orthologs #323. Best score 291 bits
Score difference with first non-orthologous sequence - A.darlingi:27 P.jiroveci:102

E3XFW7              	100.00%		L0PAY5              	100.00%
Bootstrap support for E3XFW7 as seed ortholog is 75%.
Bootstrap support for L0PAY5 as seed ortholog is 99%.

Group of orthologs #324. Best score 288 bits
Score difference with first non-orthologous sequence - A.darlingi:288 P.jiroveci:288

E3X1M2              	100.00%		L0PBB7              	100.00%
Bootstrap support for E3X1M2 as seed ortholog is 100%.
Bootstrap support for L0PBB7 as seed ortholog is 100%.

Group of orthologs #325. Best score 287 bits
Score difference with first non-orthologous sequence - A.darlingi:287 P.jiroveci:287

E3WWC1              	100.00%		L0P861              	100.00%
Bootstrap support for E3WWC1 as seed ortholog is 100%.
Bootstrap support for L0P861 as seed ortholog is 100%.

Group of orthologs #326. Best score 287 bits
Score difference with first non-orthologous sequence - A.darlingi:287 P.jiroveci:287

E3XBI2              	100.00%		L0PIR9              	100.00%
Bootstrap support for E3XBI2 as seed ortholog is 100%.
Bootstrap support for L0PIR9 as seed ortholog is 100%.

Group of orthologs #327. Best score 286 bits
Score difference with first non-orthologous sequence - A.darlingi:286 P.jiroveci:286

E3WJA9              	100.00%		L0PBD2              	100.00%
Bootstrap support for E3WJA9 as seed ortholog is 100%.
Bootstrap support for L0PBD2 as seed ortholog is 100%.

Group of orthologs #328. Best score 286 bits
Score difference with first non-orthologous sequence - A.darlingi:286 P.jiroveci:286

E3WT10              	100.00%		L0PF92              	100.00%
Bootstrap support for E3WT10 as seed ortholog is 100%.
Bootstrap support for L0PF92 as seed ortholog is 100%.

Group of orthologs #329. Best score 285 bits
Score difference with first non-orthologous sequence - A.darlingi:285 P.jiroveci:285

E3WUP7              	100.00%		L0PA23              	100.00%
Bootstrap support for E3WUP7 as seed ortholog is 100%.
Bootstrap support for L0PA23 as seed ortholog is 100%.

Group of orthologs #330. Best score 285 bits
Score difference with first non-orthologous sequence - A.darlingi:285 P.jiroveci:285

E3X7L6              	100.00%		L0PDI7              	100.00%
Bootstrap support for E3X7L6 as seed ortholog is 100%.
Bootstrap support for L0PDI7 as seed ortholog is 100%.

Group of orthologs #331. Best score 284 bits
Score difference with first non-orthologous sequence - A.darlingi:284 P.jiroveci:284

E3X048              	100.00%		L0PAJ2              	100.00%
Bootstrap support for E3X048 as seed ortholog is 100%.
Bootstrap support for L0PAJ2 as seed ortholog is 100%.

Group of orthologs #332. Best score 282 bits
Score difference with first non-orthologous sequence - A.darlingi:282 P.jiroveci:282

E3WPG5              	100.00%		L0P9Z7              	100.00%
Bootstrap support for E3WPG5 as seed ortholog is 100%.
Bootstrap support for L0P9Z7 as seed ortholog is 100%.

Group of orthologs #333. Best score 282 bits
Score difference with first non-orthologous sequence - A.darlingi:282 P.jiroveci:282

E3WRR8              	100.00%		L0P865              	100.00%
Bootstrap support for E3WRR8 as seed ortholog is 100%.
Bootstrap support for L0P865 as seed ortholog is 100%.

Group of orthologs #334. Best score 282 bits
Score difference with first non-orthologous sequence - A.darlingi:85 P.jiroveci:171

E3WK00              	100.00%		L0PGH8              	100.00%
Bootstrap support for E3WK00 as seed ortholog is 99%.
Bootstrap support for L0PGH8 as seed ortholog is 100%.

Group of orthologs #335. Best score 282 bits
Score difference with first non-orthologous sequence - A.darlingi:58 P.jiroveci:51

E3XCG0              	100.00%		L0PD71              	100.00%
Bootstrap support for E3XCG0 as seed ortholog is 93%.
Bootstrap support for L0PD71 as seed ortholog is 91%.

Group of orthologs #336. Best score 281 bits
Score difference with first non-orthologous sequence - A.darlingi:281 P.jiroveci:281

E3WPH9              	100.00%		L0PBD0              	100.00%
Bootstrap support for E3WPH9 as seed ortholog is 100%.
Bootstrap support for L0PBD0 as seed ortholog is 100%.

Group of orthologs #337. Best score 281 bits
Score difference with first non-orthologous sequence - A.darlingi:209 P.jiroveci:281

E3X9Y0              	100.00%		L0PBQ1              	100.00%
Bootstrap support for E3X9Y0 as seed ortholog is 100%.
Bootstrap support for L0PBQ1 as seed ortholog is 100%.

Group of orthologs #338. Best score 280 bits
Score difference with first non-orthologous sequence - A.darlingi:280 P.jiroveci:280

E3XCB0              	100.00%		L0P9W3              	100.00%
Bootstrap support for E3XCB0 as seed ortholog is 100%.
Bootstrap support for L0P9W3 as seed ortholog is 100%.

Group of orthologs #339. Best score 279 bits
Score difference with first non-orthologous sequence - A.darlingi:279 P.jiroveci:169

E3WJS9              	100.00%		L0P9B8              	100.00%
Bootstrap support for E3WJS9 as seed ortholog is 100%.
Bootstrap support for L0P9B8 as seed ortholog is 99%.

Group of orthologs #340. Best score 279 bits
Score difference with first non-orthologous sequence - A.darlingi:279 P.jiroveci:279

E3WMS5              	100.00%		L0PG34              	100.00%
Bootstrap support for E3WMS5 as seed ortholog is 100%.
Bootstrap support for L0PG34 as seed ortholog is 100%.

Group of orthologs #341. Best score 279 bits
Score difference with first non-orthologous sequence - A.darlingi:220 P.jiroveci:197

E3X610              	100.00%		L0PHJ3              	100.00%
Bootstrap support for E3X610 as seed ortholog is 100%.
Bootstrap support for L0PHJ3 as seed ortholog is 100%.

Group of orthologs #342. Best score 278 bits
Score difference with first non-orthologous sequence - A.darlingi:278 P.jiroveci:278

E3WVM3              	100.00%		L0P983              	100.00%
Bootstrap support for E3WVM3 as seed ortholog is 100%.
Bootstrap support for L0P983 as seed ortholog is 100%.

Group of orthologs #343. Best score 278 bits
Score difference with first non-orthologous sequence - A.darlingi:278 P.jiroveci:278

E3X609              	100.00%		L0PFY3              	100.00%
Bootstrap support for E3X609 as seed ortholog is 100%.
Bootstrap support for L0PFY3 as seed ortholog is 100%.

Group of orthologs #344. Best score 278 bits
Score difference with first non-orthologous sequence - A.darlingi:278 P.jiroveci:278

E3XGD3              	100.00%		L0PDA9              	100.00%
Bootstrap support for E3XGD3 as seed ortholog is 100%.
Bootstrap support for L0PDA9 as seed ortholog is 100%.

Group of orthologs #345. Best score 276 bits
Score difference with first non-orthologous sequence - A.darlingi:276 P.jiroveci:276

E3X900              	100.00%		L0PBT9              	100.00%
                    	       		L0P9Y0              	43.69%
Bootstrap support for E3X900 as seed ortholog is 100%.
Bootstrap support for L0PBT9 as seed ortholog is 100%.

Group of orthologs #346. Best score 276 bits
Score difference with first non-orthologous sequence - A.darlingi:276 P.jiroveci:276

E3WLU3              	100.00%		L0PDL6              	100.00%
Bootstrap support for E3WLU3 as seed ortholog is 100%.
Bootstrap support for L0PDL6 as seed ortholog is 100%.

Group of orthologs #347. Best score 276 bits
Score difference with first non-orthologous sequence - A.darlingi:164 P.jiroveci:169

E3WTR2              	100.00%		L0P7Z7              	100.00%
Bootstrap support for E3WTR2 as seed ortholog is 99%.
Bootstrap support for L0P7Z7 as seed ortholog is 99%.

Group of orthologs #348. Best score 276 bits
Score difference with first non-orthologous sequence - A.darlingi:76 P.jiroveci:276

E3WX20              	100.00%		L0PBM5              	100.00%
Bootstrap support for E3WX20 as seed ortholog is 91%.
Bootstrap support for L0PBM5 as seed ortholog is 100%.

Group of orthologs #349. Best score 275 bits
Score difference with first non-orthologous sequence - A.darlingi:275 P.jiroveci:275

E3X746              	100.00%		L0P912              	100.00%
                    	       		L0P908              	89.74%
Bootstrap support for E3X746 as seed ortholog is 100%.
Bootstrap support for L0P912 as seed ortholog is 100%.

Group of orthologs #350. Best score 275 bits
Score difference with first non-orthologous sequence - A.darlingi:275 P.jiroveci:275

E3WXY5              	100.00%		L0PFY2              	100.00%
Bootstrap support for E3WXY5 as seed ortholog is 100%.
Bootstrap support for L0PFY2 as seed ortholog is 100%.

Group of orthologs #351. Best score 275 bits
Score difference with first non-orthologous sequence - A.darlingi:275 P.jiroveci:275

E3X227              	100.00%		L0PCY0              	100.00%
Bootstrap support for E3X227 as seed ortholog is 100%.
Bootstrap support for L0PCY0 as seed ortholog is 100%.

Group of orthologs #352. Best score 275 bits
Score difference with first non-orthologous sequence - A.darlingi:275 P.jiroveci:275

E3X6G0              	100.00%		L0PHG9              	100.00%
Bootstrap support for E3X6G0 as seed ortholog is 100%.
Bootstrap support for L0PHG9 as seed ortholog is 100%.

Group of orthologs #353. Best score 274 bits
Score difference with first non-orthologous sequence - A.darlingi:199 P.jiroveci:168

E3X6Z3              	100.00%		L0PIJ3              	100.00%
                    	       		L0PEP1              	82.30%
Bootstrap support for E3X6Z3 as seed ortholog is 99%.
Bootstrap support for L0PIJ3 as seed ortholog is 99%.

Group of orthologs #354. Best score 274 bits
Score difference with first non-orthologous sequence - A.darlingi:274 P.jiroveci:274

E3WQV9              	100.00%		L0PE74              	100.00%
Bootstrap support for E3WQV9 as seed ortholog is 100%.
Bootstrap support for L0PE74 as seed ortholog is 100%.

Group of orthologs #355. Best score 274 bits
Score difference with first non-orthologous sequence - A.darlingi:156 P.jiroveci:207

E3X1Q2              	100.00%		L0P9F6              	100.00%
Bootstrap support for E3X1Q2 as seed ortholog is 99%.
Bootstrap support for L0P9F6 as seed ortholog is 100%.

Group of orthologs #356. Best score 274 bits
Score difference with first non-orthologous sequence - A.darlingi:274 P.jiroveci:274

E3WWI1              	100.00%		L0PEV9              	100.00%
Bootstrap support for E3WWI1 as seed ortholog is 100%.
Bootstrap support for L0PEV9 as seed ortholog is 100%.

Group of orthologs #357. Best score 274 bits
Score difference with first non-orthologous sequence - A.darlingi:228 P.jiroveci:113

E3WZ88              	100.00%		L0PHK8              	100.00%
Bootstrap support for E3WZ88 as seed ortholog is 100%.
Bootstrap support for L0PHK8 as seed ortholog is 99%.

Group of orthologs #358. Best score 272 bits
Score difference with first non-orthologous sequence - A.darlingi:187 P.jiroveci:272

E3WN17              	100.00%		L0PCT5              	100.00%
Bootstrap support for E3WN17 as seed ortholog is 99%.
Bootstrap support for L0PCT5 as seed ortholog is 100%.

Group of orthologs #359. Best score 272 bits
Score difference with first non-orthologous sequence - A.darlingi:272 P.jiroveci:272

E3X3H0              	100.00%		L0P8R5              	100.00%
Bootstrap support for E3X3H0 as seed ortholog is 100%.
Bootstrap support for L0P8R5 as seed ortholog is 100%.

Group of orthologs #360. Best score 272 bits
Score difference with first non-orthologous sequence - A.darlingi:272 P.jiroveci:272

E3X9S2              	100.00%		L0PBI2              	100.00%
Bootstrap support for E3X9S2 as seed ortholog is 100%.
Bootstrap support for L0PBI2 as seed ortholog is 100%.

Group of orthologs #361. Best score 271 bits
Score difference with first non-orthologous sequence - A.darlingi:48 P.jiroveci:102

E3WJY7              	100.00%		L0PA26              	100.00%
Bootstrap support for E3WJY7 as seed ortholog is 92%.
Bootstrap support for L0PA26 as seed ortholog is 99%.

Group of orthologs #362. Best score 271 bits
Score difference with first non-orthologous sequence - A.darlingi:81 P.jiroveci:175

E3WNG0              	100.00%		L0P8B4              	100.00%
Bootstrap support for E3WNG0 as seed ortholog is 97%.
Bootstrap support for L0P8B4 as seed ortholog is 99%.

Group of orthologs #363. Best score 271 bits
Score difference with first non-orthologous sequence - A.darlingi:145 P.jiroveci:177

E3XCM6              	100.00%		L0P8I7              	100.00%
Bootstrap support for E3XCM6 as seed ortholog is 100%.
Bootstrap support for L0P8I7 as seed ortholog is 100%.

Group of orthologs #364. Best score 270 bits
Score difference with first non-orthologous sequence - A.darlingi:270 P.jiroveci:270

E3WLN6              	100.00%		L0PB10              	100.00%
Bootstrap support for E3WLN6 as seed ortholog is 100%.
Bootstrap support for L0PB10 as seed ortholog is 100%.

Group of orthologs #365. Best score 270 bits
Score difference with first non-orthologous sequence - A.darlingi:197 P.jiroveci:197

E3WSL6              	100.00%		L0PBK1              	100.00%
Bootstrap support for E3WSL6 as seed ortholog is 99%.
Bootstrap support for L0PBK1 as seed ortholog is 99%.

Group of orthologs #366. Best score 270 bits
Score difference with first non-orthologous sequence - A.darlingi:270 P.jiroveci:270

E3WZU1              	100.00%		L0PDV1              	100.00%
Bootstrap support for E3WZU1 as seed ortholog is 100%.
Bootstrap support for L0PDV1 as seed ortholog is 100%.

Group of orthologs #367. Best score 270 bits
Score difference with first non-orthologous sequence - A.darlingi:270 P.jiroveci:270

E3X0Q1              	100.00%		L0PD68              	100.00%
Bootstrap support for E3X0Q1 as seed ortholog is 100%.
Bootstrap support for L0PD68 as seed ortholog is 100%.

Group of orthologs #368. Best score 268 bits
Score difference with first non-orthologous sequence - A.darlingi:268 P.jiroveci:268

E3WJF0              	100.00%		L0PG44              	100.00%
Bootstrap support for E3WJF0 as seed ortholog is 100%.
Bootstrap support for L0PG44 as seed ortholog is 100%.

Group of orthologs #369. Best score 267 bits
Score difference with first non-orthologous sequence - A.darlingi:189 P.jiroveci:267

E3X504              	100.00%		L0PEY7              	100.00%
                    	       		L0PGE3              	91.56%
Bootstrap support for E3X504 as seed ortholog is 100%.
Bootstrap support for L0PEY7 as seed ortholog is 100%.

Group of orthologs #370. Best score 267 bits
Score difference with first non-orthologous sequence - A.darlingi:159 P.jiroveci:267

E3X8M0              	100.00%		L0PDT8              	100.00%
                    	       		L0P9R2              	89.90%
Bootstrap support for E3X8M0 as seed ortholog is 100%.
Bootstrap support for L0PDT8 as seed ortholog is 100%.

Group of orthologs #371. Best score 267 bits
Score difference with first non-orthologous sequence - A.darlingi:267 P.jiroveci:267

E3WQG2              	100.00%		L0PGV8              	100.00%
Bootstrap support for E3WQG2 as seed ortholog is 100%.
Bootstrap support for L0PGV8 as seed ortholog is 100%.

Group of orthologs #372. Best score 267 bits
Score difference with first non-orthologous sequence - A.darlingi:267 P.jiroveci:267

E3X658              	100.00%		L0P8R8              	100.00%
Bootstrap support for E3X658 as seed ortholog is 100%.
Bootstrap support for L0P8R8 as seed ortholog is 100%.

Group of orthologs #373. Best score 267 bits
Score difference with first non-orthologous sequence - A.darlingi:267 P.jiroveci:267

E3X7Z4              	100.00%		L0PCW8              	100.00%
Bootstrap support for E3X7Z4 as seed ortholog is 100%.
Bootstrap support for L0PCW8 as seed ortholog is 100%.

Group of orthologs #374. Best score 266 bits
Score difference with first non-orthologous sequence - A.darlingi:266 P.jiroveci:266

E3X3H1              	100.00%		L0PBZ7              	100.00%
Bootstrap support for E3X3H1 as seed ortholog is 100%.
Bootstrap support for L0PBZ7 as seed ortholog is 100%.

Group of orthologs #375. Best score 265 bits
Score difference with first non-orthologous sequence - A.darlingi:31 P.jiroveci:27

E3WP66              	100.00%		L0PAI9              	100.00%
E3WX14              	18.14%		
Bootstrap support for E3WP66 as seed ortholog is 79%.
Bootstrap support for L0PAI9 as seed ortholog is 76%.

Group of orthologs #376. Best score 263 bits
Score difference with first non-orthologous sequence - A.darlingi:218 P.jiroveci:161

E3WUW4              	100.00%		L0PF24              	100.00%
E3XAX7              	100.00%		
Bootstrap support for E3WUW4 as seed ortholog is 100%.
Bootstrap support for E3XAX7 as seed ortholog is 100%.
Bootstrap support for L0PF24 as seed ortholog is 100%.

Group of orthologs #377. Best score 263 bits
Score difference with first non-orthologous sequence - A.darlingi:263 P.jiroveci:263

E3X220              	100.00%		L0P961              	100.00%
Bootstrap support for E3X220 as seed ortholog is 100%.
Bootstrap support for L0P961 as seed ortholog is 100%.

Group of orthologs #378. Best score 262 bits
Score difference with first non-orthologous sequence - A.darlingi:262 P.jiroveci:212

E3WJ43              	100.00%		L0PC30              	100.00%
Bootstrap support for E3WJ43 as seed ortholog is 100%.
Bootstrap support for L0PC30 as seed ortholog is 100%.

Group of orthologs #379. Best score 261 bits
Score difference with first non-orthologous sequence - A.darlingi:261 P.jiroveci:261

E3WMZ5              	100.00%		L0PF71              	100.00%
Bootstrap support for E3WMZ5 as seed ortholog is 100%.
Bootstrap support for L0PF71 as seed ortholog is 100%.

Group of orthologs #380. Best score 261 bits
Score difference with first non-orthologous sequence - A.darlingi:261 P.jiroveci:261

E3X3H2              	100.00%		L0PBT3              	100.00%
Bootstrap support for E3X3H2 as seed ortholog is 100%.
Bootstrap support for L0PBT3 as seed ortholog is 100%.

Group of orthologs #381. Best score 260 bits
Score difference with first non-orthologous sequence - A.darlingi:260 P.jiroveci:260

E3WYF5              	100.00%		L0PBE0              	100.00%
E3WUR4              	6.46%		
Bootstrap support for E3WYF5 as seed ortholog is 100%.
Bootstrap support for L0PBE0 as seed ortholog is 100%.

Group of orthologs #382. Best score 260 bits
Score difference with first non-orthologous sequence - A.darlingi:183 P.jiroveci:260

E3WMU4              	100.00%		L0PB23              	100.00%
Bootstrap support for E3WMU4 as seed ortholog is 99%.
Bootstrap support for L0PB23 as seed ortholog is 100%.

Group of orthologs #383. Best score 259 bits
Score difference with first non-orthologous sequence - A.darlingi:218 P.jiroveci:178

E3XBX6              	100.00%		L0PCJ2              	100.00%
Bootstrap support for E3XBX6 as seed ortholog is 100%.
Bootstrap support for L0PCJ2 as seed ortholog is 100%.

Group of orthologs #384. Best score 258 bits
Score difference with first non-orthologous sequence - A.darlingi:258 P.jiroveci:258

E3WPJ3              	100.00%		L0PBX2              	100.00%
Bootstrap support for E3WPJ3 as seed ortholog is 100%.
Bootstrap support for L0PBX2 as seed ortholog is 100%.

Group of orthologs #385. Best score 256 bits
Score difference with first non-orthologous sequence - A.darlingi:256 P.jiroveci:256

E3WVL4              	100.00%		L0PG08              	100.00%
Bootstrap support for E3WVL4 as seed ortholog is 100%.
Bootstrap support for L0PG08 as seed ortholog is 100%.

Group of orthologs #386. Best score 256 bits
Score difference with first non-orthologous sequence - A.darlingi:256 P.jiroveci:256

E3WZ56              	100.00%		L0PF46              	100.00%
Bootstrap support for E3WZ56 as seed ortholog is 100%.
Bootstrap support for L0PF46 as seed ortholog is 100%.

Group of orthologs #387. Best score 255 bits
Score difference with first non-orthologous sequence - A.darlingi:255 P.jiroveci:255

E3WJU7              	100.00%		L0P723              	100.00%
Bootstrap support for E3WJU7 as seed ortholog is 100%.
Bootstrap support for L0P723 as seed ortholog is 100%.

Group of orthologs #388. Best score 254 bits
Score difference with first non-orthologous sequence - A.darlingi:254 P.jiroveci:254

E3WXT2              	100.00%		L0PFC0              	100.00%
Bootstrap support for E3WXT2 as seed ortholog is 100%.
Bootstrap support for L0PFC0 as seed ortholog is 100%.

Group of orthologs #389. Best score 254 bits
Score difference with first non-orthologous sequence - A.darlingi:254 P.jiroveci:254

E3WZJ3              	100.00%		L0PFI8              	100.00%
Bootstrap support for E3WZJ3 as seed ortholog is 100%.
Bootstrap support for L0PFI8 as seed ortholog is 100%.

Group of orthologs #390. Best score 254 bits
Score difference with first non-orthologous sequence - A.darlingi:254 P.jiroveci:254

E3X8Q4              	100.00%		L0PCM9              	100.00%
Bootstrap support for E3X8Q4 as seed ortholog is 100%.
Bootstrap support for L0PCM9 as seed ortholog is 100%.

Group of orthologs #391. Best score 253 bits
Score difference with first non-orthologous sequence - A.darlingi:253 P.jiroveci:120

E3WKC9              	100.00%		L0PDB7              	100.00%
Bootstrap support for E3WKC9 as seed ortholog is 100%.
Bootstrap support for L0PDB7 as seed ortholog is 99%.

Group of orthologs #392. Best score 253 bits
Score difference with first non-orthologous sequence - A.darlingi:253 P.jiroveci:253

E3WUP8              	100.00%		L0PAM2              	100.00%
Bootstrap support for E3WUP8 as seed ortholog is 100%.
Bootstrap support for L0PAM2 as seed ortholog is 100%.

Group of orthologs #393. Best score 252 bits
Score difference with first non-orthologous sequence - A.darlingi:117 P.jiroveci:154

E3WSW6              	100.00%		L0PBM6              	100.00%
Bootstrap support for E3WSW6 as seed ortholog is 99%.
Bootstrap support for L0PBM6 as seed ortholog is 99%.

Group of orthologs #394. Best score 252 bits
Score difference with first non-orthologous sequence - A.darlingi:252 P.jiroveci:115

E3X1I9              	100.00%		L0PB03              	100.00%
Bootstrap support for E3X1I9 as seed ortholog is 100%.
Bootstrap support for L0PB03 as seed ortholog is 99%.

Group of orthologs #395. Best score 252 bits
Score difference with first non-orthologous sequence - A.darlingi:252 P.jiroveci:252

E3XCF2              	100.00%		L0P9M9              	100.00%
Bootstrap support for E3XCF2 as seed ortholog is 100%.
Bootstrap support for L0P9M9 as seed ortholog is 100%.

Group of orthologs #396. Best score 252 bits
Score difference with first non-orthologous sequence - A.darlingi:252 P.jiroveci:252

E3X8V2              	100.00%		L0PES4              	100.00%
Bootstrap support for E3X8V2 as seed ortholog is 100%.
Bootstrap support for L0PES4 as seed ortholog is 100%.

Group of orthologs #397. Best score 251 bits
Score difference with first non-orthologous sequence - A.darlingi:251 P.jiroveci:251

E3XAM1              	100.00%		L0PEB2              	100.00%
Bootstrap support for E3XAM1 as seed ortholog is 100%.
Bootstrap support for L0PEB2 as seed ortholog is 100%.

Group of orthologs #398. Best score 250 bits
Score difference with first non-orthologous sequence - A.darlingi:77 P.jiroveci:17

E3WPK4              	100.00%		L0P6X2              	100.00%
Bootstrap support for E3WPK4 as seed ortholog is 99%.
Bootstrap support for L0P6X2 as seed ortholog is 73%.
Alternative seed ortholog is L0PER5 (17 bits away from this cluster)

Group of orthologs #399. Best score 250 bits
Score difference with first non-orthologous sequence - A.darlingi:250 P.jiroveci:250

E3WP01              	100.00%		L0P9C4              	100.00%
Bootstrap support for E3WP01 as seed ortholog is 100%.
Bootstrap support for L0P9C4 as seed ortholog is 100%.

Group of orthologs #400. Best score 250 bits
Score difference with first non-orthologous sequence - A.darlingi:250 P.jiroveci:250

E3WJI7              	100.00%		L0PFZ0              	100.00%
Bootstrap support for E3WJI7 as seed ortholog is 100%.
Bootstrap support for L0PFZ0 as seed ortholog is 100%.

Group of orthologs #401. Best score 250 bits
Score difference with first non-orthologous sequence - A.darlingi:250 P.jiroveci:250

E3WZJ1              	100.00%		L0PAC0              	100.00%
Bootstrap support for E3WZJ1 as seed ortholog is 100%.
Bootstrap support for L0PAC0 as seed ortholog is 100%.

Group of orthologs #402. Best score 250 bits
Score difference with first non-orthologous sequence - A.darlingi:67 P.jiroveci:72

E3WZR0              	100.00%		L0PDD3              	100.00%
Bootstrap support for E3WZR0 as seed ortholog is 99%.
Bootstrap support for L0PDD3 as seed ortholog is 99%.

Group of orthologs #403. Best score 248 bits
Score difference with first non-orthologous sequence - A.darlingi:147 P.jiroveci:9

E3X6P2              	100.00%		L0P9E4              	100.00%
Bootstrap support for E3X6P2 as seed ortholog is 100%.
Bootstrap support for L0P9E4 as seed ortholog is 65%.
Alternative seed ortholog is L0PC59 (9 bits away from this cluster)

Group of orthologs #404. Best score 248 bits
Score difference with first non-orthologous sequence - A.darlingi:248 P.jiroveci:248

E3X9C5              	100.00%		L0P8L5              	100.00%
Bootstrap support for E3X9C5 as seed ortholog is 100%.
Bootstrap support for L0P8L5 as seed ortholog is 100%.

Group of orthologs #405. Best score 246 bits
Score difference with first non-orthologous sequence - A.darlingi:246 P.jiroveci:246

E3X1G4              	100.00%		L0PF44              	100.00%
Bootstrap support for E3X1G4 as seed ortholog is 100%.
Bootstrap support for L0PF44 as seed ortholog is 100%.

Group of orthologs #406. Best score 245 bits
Score difference with first non-orthologous sequence - A.darlingi:151 P.jiroveci:151

E3X2Q8              	100.00%		L0PDR6              	100.00%
Bootstrap support for E3X2Q8 as seed ortholog is 100%.
Bootstrap support for L0PDR6 as seed ortholog is 99%.

Group of orthologs #407. Best score 244 bits
Score difference with first non-orthologous sequence - A.darlingi:202 P.jiroveci:193

E3WW66              	100.00%		L0P895              	100.00%
Bootstrap support for E3WW66 as seed ortholog is 100%.
Bootstrap support for L0P895 as seed ortholog is 100%.

Group of orthologs #408. Best score 244 bits
Score difference with first non-orthologous sequence - A.darlingi:244 P.jiroveci:244

E3X6G2              	100.00%		L0P870              	100.00%
Bootstrap support for E3X6G2 as seed ortholog is 100%.
Bootstrap support for L0P870 as seed ortholog is 100%.

Group of orthologs #409. Best score 244 bits
Score difference with first non-orthologous sequence - A.darlingi:244 P.jiroveci:244

E3X491              	100.00%		L0PBA4              	100.00%
Bootstrap support for E3X491 as seed ortholog is 100%.
Bootstrap support for L0PBA4 as seed ortholog is 100%.

Group of orthologs #410. Best score 243 bits
Score difference with first non-orthologous sequence - A.darlingi:243 P.jiroveci:243

E3WLN9              	100.00%		L0PA63              	100.00%
Bootstrap support for E3WLN9 as seed ortholog is 100%.
Bootstrap support for L0PA63 as seed ortholog is 100%.

Group of orthologs #411. Best score 243 bits
Score difference with first non-orthologous sequence - A.darlingi:243 P.jiroveci:243

E3WKV2              	100.00%		L0PF73              	100.00%
Bootstrap support for E3WKV2 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #412. Best score 243 bits
Score difference with first non-orthologous sequence - A.darlingi:243 P.jiroveci:243

E3WMD9              	100.00%		L0PG93              	100.00%
Bootstrap support for E3WMD9 as seed ortholog is 100%.
Bootstrap support for L0PG93 as seed ortholog is 100%.

Group of orthologs #413. Best score 243 bits
Score difference with first non-orthologous sequence - A.darlingi:243 P.jiroveci:243

E3X8M8              	100.00%		L0PBK2              	100.00%
Bootstrap support for E3X8M8 as seed ortholog is 100%.
Bootstrap support for L0PBK2 as seed ortholog is 100%.

Group of orthologs #414. Best score 243 bits
Score difference with first non-orthologous sequence - A.darlingi:243 P.jiroveci:243

E3XBX7              	100.00%		L0PF79              	100.00%
Bootstrap support for E3XBX7 as seed ortholog is 100%.
Bootstrap support for L0PF79 as seed ortholog is 100%.

Group of orthologs #415. Best score 242 bits
Score difference with first non-orthologous sequence - A.darlingi:242 P.jiroveci:131

E3XET9              	100.00%		L0PBF0              	100.00%
                    	       		L0P6V9              	10.60%
Bootstrap support for E3XET9 as seed ortholog is 100%.
Bootstrap support for L0PBF0 as seed ortholog is 100%.

Group of orthologs #416. Best score 242 bits
Score difference with first non-orthologous sequence - A.darlingi:242 P.jiroveci:242

E3WRR6              	100.00%		L0P914              	100.00%
Bootstrap support for E3WRR6 as seed ortholog is 100%.
Bootstrap support for L0P914 as seed ortholog is 100%.

Group of orthologs #417. Best score 242 bits
Score difference with first non-orthologous sequence - A.darlingi:127 P.jiroveci:242

E3WXZ2              	100.00%		L0PBM0              	100.00%
Bootstrap support for E3WXZ2 as seed ortholog is 99%.
Bootstrap support for L0PBM0 as seed ortholog is 100%.

Group of orthologs #418. Best score 242 bits
Score difference with first non-orthologous sequence - A.darlingi:242 P.jiroveci:242

E3X8V8              	100.00%		L0PCH0              	100.00%
Bootstrap support for E3X8V8 as seed ortholog is 100%.
Bootstrap support for L0PCH0 as seed ortholog is 100%.

Group of orthologs #419. Best score 242 bits
Score difference with first non-orthologous sequence - A.darlingi:242 P.jiroveci:242

E3X9D0              	100.00%		L0PFW4              	100.00%
Bootstrap support for E3X9D0 as seed ortholog is 100%.
Bootstrap support for L0PFW4 as seed ortholog is 100%.

Group of orthologs #420. Best score 241 bits
Score difference with first non-orthologous sequence - A.darlingi:72 P.jiroveci:241

E3WJN7              	100.00%		L0PDT0              	100.00%
Bootstrap support for E3WJN7 as seed ortholog is 94%.
Bootstrap support for L0PDT0 as seed ortholog is 100%.

Group of orthologs #421. Best score 241 bits
Score difference with first non-orthologous sequence - A.darlingi:241 P.jiroveci:241

E3X2S9              	100.00%		L0P9S4              	100.00%
Bootstrap support for E3X2S9 as seed ortholog is 100%.
Bootstrap support for L0P9S4 as seed ortholog is 100%.

Group of orthologs #422. Best score 240 bits
Score difference with first non-orthologous sequence - A.darlingi:82 P.jiroveci:91

E3XCC0              	100.00%		L0P966              	100.00%
Bootstrap support for E3XCC0 as seed ortholog is 95%.
Bootstrap support for L0P966 as seed ortholog is 98%.

Group of orthologs #423. Best score 239 bits
Score difference with first non-orthologous sequence - A.darlingi:113 P.jiroveci:166

E3WL55              	100.00%		L0PH42              	100.00%
Bootstrap support for E3WL55 as seed ortholog is 98%.
Bootstrap support for L0PH42 as seed ortholog is 99%.

Group of orthologs #424. Best score 239 bits
Score difference with first non-orthologous sequence - A.darlingi:239 P.jiroveci:239

E3WZF7              	100.00%		L0P8B2              	100.00%
Bootstrap support for E3WZF7 as seed ortholog is 100%.
Bootstrap support for L0P8B2 as seed ortholog is 100%.

Group of orthologs #425. Best score 239 bits
Score difference with first non-orthologous sequence - A.darlingi:239 P.jiroveci:239

E3WSU6              	100.00%		L0PGN1              	100.00%
Bootstrap support for E3WSU6 as seed ortholog is 100%.
Bootstrap support for L0PGN1 as seed ortholog is 100%.

Group of orthologs #426. Best score 239 bits
Score difference with first non-orthologous sequence - A.darlingi:182 P.jiroveci:239

E3XAH9              	100.00%		L0PBH8              	100.00%
Bootstrap support for E3XAH9 as seed ortholog is 99%.
Bootstrap support for L0PBH8 as seed ortholog is 100%.

Group of orthologs #427. Best score 238 bits
Score difference with first non-orthologous sequence - A.darlingi:238 P.jiroveci:238

E3XAB1              	100.00%		L0P790              	100.00%
Bootstrap support for E3XAB1 as seed ortholog is 100%.
Bootstrap support for L0P790 as seed ortholog is 100%.

Group of orthologs #428. Best score 238 bits
Score difference with first non-orthologous sequence - A.darlingi:238 P.jiroveci:238

E3XB37              	100.00%		L0PF83              	100.00%
Bootstrap support for E3XB37 as seed ortholog is 100%.
Bootstrap support for L0PF83 as seed ortholog is 100%.

Group of orthologs #429. Best score 238 bits
Score difference with first non-orthologous sequence - A.darlingi:137 P.jiroveci:238

E3XB65              	100.00%		L0PGL1              	100.00%
Bootstrap support for E3XB65 as seed ortholog is 99%.
Bootstrap support for L0PGL1 as seed ortholog is 100%.

Group of orthologs #430. Best score 238 bits
Score difference with first non-orthologous sequence - A.darlingi:153 P.jiroveci:184

E3XDG1              	100.00%		L0PFE0              	100.00%
Bootstrap support for E3XDG1 as seed ortholog is 99%.
Bootstrap support for L0PFE0 as seed ortholog is 100%.

Group of orthologs #431. Best score 237 bits
Score difference with first non-orthologous sequence - A.darlingi:237 P.jiroveci:237

E3WXM0              	100.00%		L0P9B6              	100.00%
Bootstrap support for E3WXM0 as seed ortholog is 100%.
Bootstrap support for L0P9B6 as seed ortholog is 100%.

Group of orthologs #432. Best score 237 bits
Score difference with first non-orthologous sequence - A.darlingi:237 P.jiroveci:237

E3X2M9              	100.00%		L0PDB6              	100.00%
Bootstrap support for E3X2M9 as seed ortholog is 100%.
Bootstrap support for L0PDB6 as seed ortholog is 100%.

Group of orthologs #433. Best score 237 bits
Score difference with first non-orthologous sequence - A.darlingi:237 P.jiroveci:237

E3X7F5              	100.00%		L0PD44              	100.00%
Bootstrap support for E3X7F5 as seed ortholog is 100%.
Bootstrap support for L0PD44 as seed ortholog is 100%.

Group of orthologs #434. Best score 236 bits
Score difference with first non-orthologous sequence - A.darlingi:236 P.jiroveci:236

E3WYU5              	100.00%		L0PBP9              	100.00%
Bootstrap support for E3WYU5 as seed ortholog is 100%.
Bootstrap support for L0PBP9 as seed ortholog is 100%.

Group of orthologs #435. Best score 236 bits
Score difference with first non-orthologous sequence - A.darlingi:236 P.jiroveci:236

E3X3J9              	100.00%		L0PEY2              	100.00%
Bootstrap support for E3X3J9 as seed ortholog is 100%.
Bootstrap support for L0PEY2 as seed ortholog is 100%.

Group of orthologs #436. Best score 235 bits
Score difference with first non-orthologous sequence - A.darlingi:235 P.jiroveci:235

E3WT33              	100.00%		L0PB28              	100.00%
Bootstrap support for E3WT33 as seed ortholog is 100%.
Bootstrap support for L0PB28 as seed ortholog is 100%.

Group of orthologs #437. Best score 235 bits
Score difference with first non-orthologous sequence - A.darlingi:235 P.jiroveci:235

E3WVW1              	100.00%		L0PH54              	100.00%
Bootstrap support for E3WVW1 as seed ortholog is 100%.
Bootstrap support for L0PH54 as seed ortholog is 100%.

Group of orthologs #438. Best score 235 bits
Score difference with first non-orthologous sequence - A.darlingi:235 P.jiroveci:235

E3X6B8              	100.00%		L0P9T5              	100.00%
Bootstrap support for E3X6B8 as seed ortholog is 100%.
Bootstrap support for L0P9T5 as seed ortholog is 100%.

Group of orthologs #439. Best score 233 bits
Score difference with first non-orthologous sequence - A.darlingi:233 P.jiroveci:233

E3WR40              	100.00%		L0PCR8              	100.00%
                    	       		L0PH75              	91.01%
Bootstrap support for E3WR40 as seed ortholog is 100%.
Bootstrap support for L0PCR8 as seed ortholog is 100%.

Group of orthologs #440. Best score 233 bits
Score difference with first non-orthologous sequence - A.darlingi:233 P.jiroveci:233

E3WZI7              	100.00%		L0P9S7              	100.00%
Bootstrap support for E3WZI7 as seed ortholog is 100%.
Bootstrap support for L0P9S7 as seed ortholog is 100%.

Group of orthologs #441. Best score 233 bits
Score difference with first non-orthologous sequence - A.darlingi:233 P.jiroveci:233

E3XAL5              	100.00%		L0PCX5              	100.00%
Bootstrap support for E3XAL5 as seed ortholog is 100%.
Bootstrap support for L0PCX5 as seed ortholog is 100%.

Group of orthologs #442. Best score 232 bits
Score difference with first non-orthologous sequence - A.darlingi:232 P.jiroveci:232

E3WPY7              	100.00%		L0P896              	100.00%
Bootstrap support for E3WPY7 as seed ortholog is 100%.
Bootstrap support for L0P896 as seed ortholog is 100%.

Group of orthologs #443. Best score 230 bits
Score difference with first non-orthologous sequence - A.darlingi:230 P.jiroveci:230

E3WJB8              	100.00%		L0PIV4              	100.00%
Bootstrap support for E3WJB8 as seed ortholog is 100%.
Bootstrap support for L0PIV4 as seed ortholog is 100%.

Group of orthologs #444. Best score 230 bits
Score difference with first non-orthologous sequence - A.darlingi:230 P.jiroveci:230

E3X1A3              	100.00%		L0PBN2              	100.00%
Bootstrap support for E3X1A3 as seed ortholog is 100%.
Bootstrap support for L0PBN2 as seed ortholog is 100%.

Group of orthologs #445. Best score 229 bits
Score difference with first non-orthologous sequence - A.darlingi:229 P.jiroveci:229

E3X1I7              	100.00%		L0PGD7              	100.00%
                    	       		L0PGQ0              	62.62%
Bootstrap support for E3X1I7 as seed ortholog is 100%.
Bootstrap support for L0PGD7 as seed ortholog is 100%.

Group of orthologs #446. Best score 229 bits
Score difference with first non-orthologous sequence - A.darlingi:153 P.jiroveci:147

E3WRF8              	100.00%		L0PFK0              	100.00%
Bootstrap support for E3WRF8 as seed ortholog is 99%.
Bootstrap support for L0PFK0 as seed ortholog is 100%.

Group of orthologs #447. Best score 229 bits
Score difference with first non-orthologous sequence - A.darlingi:229 P.jiroveci:229

E3WZ10              	100.00%		L0P8K8              	100.00%
Bootstrap support for E3WZ10 as seed ortholog is 100%.
Bootstrap support for L0P8K8 as seed ortholog is 100%.

Group of orthologs #448. Best score 229 bits
Score difference with first non-orthologous sequence - A.darlingi:110 P.jiroveci:229

E3X4B7              	100.00%		L0PCG0              	100.00%
Bootstrap support for E3X4B7 as seed ortholog is 99%.
Bootstrap support for L0PCG0 as seed ortholog is 100%.

Group of orthologs #449. Best score 229 bits
Score difference with first non-orthologous sequence - A.darlingi:229 P.jiroveci:229

E3X605              	100.00%		L0PHL1              	100.00%
Bootstrap support for E3X605 as seed ortholog is 100%.
Bootstrap support for L0PHL1 as seed ortholog is 100%.

Group of orthologs #450. Best score 229 bits
Score difference with first non-orthologous sequence - A.darlingi:229 P.jiroveci:229

E3X8B2              	100.00%		L0PGG0              	100.00%
Bootstrap support for E3X8B2 as seed ortholog is 100%.
Bootstrap support for L0PGG0 as seed ortholog is 100%.

Group of orthologs #451. Best score 228 bits
Score difference with first non-orthologous sequence - A.darlingi:228 P.jiroveci:228

E3WNX5              	100.00%		L0PB11              	100.00%
Bootstrap support for E3WNX5 as seed ortholog is 100%.
Bootstrap support for L0PB11 as seed ortholog is 100%.

Group of orthologs #452. Best score 228 bits
Score difference with first non-orthologous sequence - A.darlingi:228 P.jiroveci:228

E3WYM0              	100.00%		L0PCI8              	100.00%
Bootstrap support for E3WYM0 as seed ortholog is 100%.
Bootstrap support for L0PCI8 as seed ortholog is 100%.

Group of orthologs #453. Best score 227 bits
Score difference with first non-orthologous sequence - A.darlingi:227 P.jiroveci:227

B6DDV2              	100.00%		L0PAE8              	100.00%
Bootstrap support for B6DDV2 as seed ortholog is 100%.
Bootstrap support for L0PAE8 as seed ortholog is 100%.

Group of orthologs #454. Best score 226 bits
Score difference with first non-orthologous sequence - A.darlingi:226 P.jiroveci:105

E3WUG5              	100.00%		L0P9G1              	100.00%
Bootstrap support for E3WUG5 as seed ortholog is 100%.
Bootstrap support for L0P9G1 as seed ortholog is 99%.

Group of orthologs #455. Best score 226 bits
Score difference with first non-orthologous sequence - A.darlingi:226 P.jiroveci:226

E3X2H8              	100.00%		L0PCC1              	100.00%
Bootstrap support for E3X2H8 as seed ortholog is 100%.
Bootstrap support for L0PCC1 as seed ortholog is 100%.

Group of orthologs #456. Best score 226 bits
Score difference with first non-orthologous sequence - A.darlingi:160 P.jiroveci:226

E3X7A9              	100.00%		L0PAL2              	100.00%
Bootstrap support for E3X7A9 as seed ortholog is 99%.
Bootstrap support for L0PAL2 as seed ortholog is 100%.

Group of orthologs #457. Best score 225 bits
Score difference with first non-orthologous sequence - A.darlingi:114 P.jiroveci:225

E3WRY3              	100.00%		L0P962              	100.00%
Bootstrap support for E3WRY3 as seed ortholog is 96%.
Bootstrap support for L0P962 as seed ortholog is 100%.

Group of orthologs #458. Best score 225 bits
Score difference with first non-orthologous sequence - A.darlingi:225 P.jiroveci:225

E3XDS3              	100.00%		L0P9L7              	100.00%
Bootstrap support for E3XDS3 as seed ortholog is 100%.
Bootstrap support for L0P9L7 as seed ortholog is 100%.

Group of orthologs #459. Best score 224 bits
Score difference with first non-orthologous sequence - A.darlingi:224 P.jiroveci:168

E3X5Z5              	100.00%		L0PAC4              	100.00%
E3X5Q2              	40.47%		L0P871              	98.43%
Bootstrap support for E3X5Z5 as seed ortholog is 100%.
Bootstrap support for L0PAC4 as seed ortholog is 99%.

Group of orthologs #460. Best score 224 bits
Score difference with first non-orthologous sequence - A.darlingi:224 P.jiroveci:224

E3WSC5              	100.00%		L0PEI5              	100.00%
Bootstrap support for E3WSC5 as seed ortholog is 100%.
Bootstrap support for L0PEI5 as seed ortholog is 100%.

Group of orthologs #461. Best score 223 bits
Score difference with first non-orthologous sequence - A.darlingi:223 P.jiroveci:223

E3WPP8              	100.00%		L0P7Q3              	100.00%
Bootstrap support for E3WPP8 as seed ortholog is 100%.
Bootstrap support for L0P7Q3 as seed ortholog is 100%.

Group of orthologs #462. Best score 223 bits
Score difference with first non-orthologous sequence - A.darlingi:223 P.jiroveci:223

E3WP46              	100.00%		L0P9N8              	100.00%
Bootstrap support for E3WP46 as seed ortholog is 100%.
Bootstrap support for L0P9N8 as seed ortholog is 100%.

Group of orthologs #463. Best score 222 bits
Score difference with first non-orthologous sequence - A.darlingi:152 P.jiroveci:138

E3WPI8              	100.00%		L0P863              	100.00%
Bootstrap support for E3WPI8 as seed ortholog is 99%.
Bootstrap support for L0P863 as seed ortholog is 99%.

Group of orthologs #464. Best score 222 bits
Score difference with first non-orthologous sequence - A.darlingi:222 P.jiroveci:222

E3XBW2              	100.00%		L0P702              	100.00%
Bootstrap support for E3XBW2 as seed ortholog is 100%.
Bootstrap support for L0P702 as seed ortholog is 100%.

Group of orthologs #465. Best score 221 bits
Score difference with first non-orthologous sequence - A.darlingi:221 P.jiroveci:221

E3WJ20              	100.00%		L0P9S5              	100.00%
Bootstrap support for E3WJ20 as seed ortholog is 100%.
Bootstrap support for L0P9S5 as seed ortholog is 100%.

Group of orthologs #466. Best score 220 bits
Score difference with first non-orthologous sequence - A.darlingi:220 P.jiroveci:220

E3XC18              	100.00%		L0PI61              	100.00%
E3WNR9              	69.11%		L0PA50              	19.34%
Bootstrap support for E3XC18 as seed ortholog is 100%.
Bootstrap support for L0PI61 as seed ortholog is 100%.

Group of orthologs #467. Best score 220 bits
Score difference with first non-orthologous sequence - A.darlingi:220 P.jiroveci:220

E3X673              	100.00%		L0P9K2              	100.00%
Bootstrap support for E3X673 as seed ortholog is 100%.
Bootstrap support for L0P9K2 as seed ortholog is 100%.

Group of orthologs #468. Best score 219 bits
Score difference with first non-orthologous sequence - A.darlingi:81 P.jiroveci:219

E3X6E6              	100.00%		L0PC75              	100.00%
Bootstrap support for E3X6E6 as seed ortholog is 99%.
Bootstrap support for L0PC75 as seed ortholog is 100%.

Group of orthologs #469. Best score 219 bits
Score difference with first non-orthologous sequence - A.darlingi:219 P.jiroveci:127

E3X5A0              	100.00%		L0PDR1              	100.00%
Bootstrap support for E3X5A0 as seed ortholog is 100%.
Bootstrap support for L0PDR1 as seed ortholog is 99%.

Group of orthologs #470. Best score 218 bits
Score difference with first non-orthologous sequence - A.darlingi:218 P.jiroveci:218

E3X9R0              	100.00%		L0PB82              	100.00%
Bootstrap support for E3X9R0 as seed ortholog is 100%.
Bootstrap support for L0PB82 as seed ortholog is 100%.

Group of orthologs #471. Best score 217 bits
Score difference with first non-orthologous sequence - A.darlingi:217 P.jiroveci:217

E3WWW1              	100.00%		L0PI09              	100.00%
Bootstrap support for E3WWW1 as seed ortholog is 100%.
Bootstrap support for L0PI09 as seed ortholog is 100%.

Group of orthologs #472. Best score 216 bits
Score difference with first non-orthologous sequence - A.darlingi:216 P.jiroveci:216

E3WU04              	100.00%		L0PBB0              	100.00%
Bootstrap support for E3WU04 as seed ortholog is 100%.
Bootstrap support for L0PBB0 as seed ortholog is 100%.

Group of orthologs #473. Best score 216 bits
Score difference with first non-orthologous sequence - A.darlingi:216 P.jiroveci:216

E3X8W2              	100.00%		L0PGE7              	100.00%
Bootstrap support for E3X8W2 as seed ortholog is 100%.
Bootstrap support for L0PGE7 as seed ortholog is 100%.

Group of orthologs #474. Best score 215 bits
Score difference with first non-orthologous sequence - A.darlingi:118 P.jiroveci:215

E3WYB9              	100.00%		L0PEQ4              	100.00%
Bootstrap support for E3WYB9 as seed ortholog is 99%.
Bootstrap support for L0PEQ4 as seed ortholog is 100%.

Group of orthologs #475. Best score 215 bits
Score difference with first non-orthologous sequence - A.darlingi:215 P.jiroveci:215

E3XFG2              	100.00%		L0PH55              	100.00%
Bootstrap support for E3XFG2 as seed ortholog is 100%.
Bootstrap support for L0PH55 as seed ortholog is 100%.

Group of orthologs #476. Best score 214 bits
Score difference with first non-orthologous sequence - A.darlingi:214 P.jiroveci:214

E3WQN8              	100.00%		L0P9F7              	100.00%
                    	       		L0PGP0              	83.73%
Bootstrap support for E3WQN8 as seed ortholog is 100%.
Bootstrap support for L0P9F7 as seed ortholog is 100%.

Group of orthologs #477. Best score 213 bits
Score difference with first non-orthologous sequence - A.darlingi:72 P.jiroveci:141

E3X7B8              	100.00%		L0PFK8              	100.00%
                    	       		L0PCW4              	13.33%
Bootstrap support for E3X7B8 as seed ortholog is 95%.
Bootstrap support for L0PFK8 as seed ortholog is 99%.

Group of orthologs #478. Best score 213 bits
Score difference with first non-orthologous sequence - A.darlingi:213 P.jiroveci:213

E3WV64              	100.00%		L0P7H2              	100.00%
Bootstrap support for E3WV64 as seed ortholog is 100%.
Bootstrap support for L0P7H2 as seed ortholog is 100%.

Group of orthologs #479. Best score 213 bits
Score difference with first non-orthologous sequence - A.darlingi:213 P.jiroveci:213

E3X1L2              	100.00%		L0PBV8              	100.00%
Bootstrap support for E3X1L2 as seed ortholog is 100%.
Bootstrap support for L0PBV8 as seed ortholog is 100%.

Group of orthologs #480. Best score 212 bits
Score difference with first non-orthologous sequence - A.darlingi:212 P.jiroveci:212

E3WTX5              	100.00%		L0PAJ0              	100.00%
Bootstrap support for E3WTX5 as seed ortholog is 100%.
Bootstrap support for L0PAJ0 as seed ortholog is 100%.

Group of orthologs #481. Best score 212 bits
Score difference with first non-orthologous sequence - A.darlingi:212 P.jiroveci:212

E3WZX2              	100.00%		L0P949              	100.00%
Bootstrap support for E3WZX2 as seed ortholog is 100%.
Bootstrap support for L0P949 as seed ortholog is 100%.

Group of orthologs #482. Best score 212 bits
Score difference with first non-orthologous sequence - A.darlingi:212 P.jiroveci:212

E3X9H2              	100.00%		L0PBS5              	100.00%
Bootstrap support for E3X9H2 as seed ortholog is 100%.
Bootstrap support for L0PBS5 as seed ortholog is 100%.

Group of orthologs #483. Best score 212 bits
Score difference with first non-orthologous sequence - A.darlingi:130 P.jiroveci:212

E3XEA0              	100.00%		L0PG86              	100.00%
Bootstrap support for E3XEA0 as seed ortholog is 99%.
Bootstrap support for L0PG86 as seed ortholog is 100%.

Group of orthologs #484. Best score 208 bits
Score difference with first non-orthologous sequence - A.darlingi:208 P.jiroveci:208

E3WUD4              	100.00%		L0PE58              	100.00%
Bootstrap support for E3WUD4 as seed ortholog is 100%.
Bootstrap support for L0PE58 as seed ortholog is 100%.

Group of orthologs #485. Best score 208 bits
Score difference with first non-orthologous sequence - A.darlingi:208 P.jiroveci:208

E3X3N0              	100.00%		L0PA36              	100.00%
Bootstrap support for E3X3N0 as seed ortholog is 100%.
Bootstrap support for L0PA36 as seed ortholog is 100%.

Group of orthologs #486. Best score 207 bits
Score difference with first non-orthologous sequence - A.darlingi:207 P.jiroveci:207

E3WJI8              	100.00%		L0PEW5              	100.00%
Bootstrap support for E3WJI8 as seed ortholog is 100%.
Bootstrap support for L0PEW5 as seed ortholog is 100%.

Group of orthologs #487. Best score 207 bits
Score difference with first non-orthologous sequence - A.darlingi:207 P.jiroveci:207

E3X5P3              	100.00%		L0PGD6              	100.00%
Bootstrap support for E3X5P3 as seed ortholog is 100%.
Bootstrap support for L0PGD6 as seed ortholog is 100%.

Group of orthologs #488. Best score 207 bits
Score difference with first non-orthologous sequence - A.darlingi:207 P.jiroveci:207

E3X9E8              	100.00%		L0PEL2              	100.00%
Bootstrap support for E3X9E8 as seed ortholog is 100%.
Bootstrap support for L0PEL2 as seed ortholog is 100%.

Group of orthologs #489. Best score 206 bits
Score difference with first non-orthologous sequence - A.darlingi:206 P.jiroveci:73

E3XAK7              	100.00%		L0PG10              	100.00%
E3X8K5              	18.55%		
Bootstrap support for E3XAK7 as seed ortholog is 100%.
Bootstrap support for L0PG10 as seed ortholog is 98%.

Group of orthologs #490. Best score 205 bits
Score difference with first non-orthologous sequence - A.darlingi:205 P.jiroveci:113

E3WLF4              	100.00%		L0PBV6              	100.00%
Bootstrap support for E3WLF4 as seed ortholog is 100%.
Bootstrap support for L0PBV6 as seed ortholog is 99%.

Group of orthologs #491. Best score 205 bits
Score difference with first non-orthologous sequence - A.darlingi:205 P.jiroveci:205

E3WSH1              	100.00%		L0PCU5              	100.00%
Bootstrap support for E3WSH1 as seed ortholog is 100%.
Bootstrap support for L0PCU5 as seed ortholog is 100%.

Group of orthologs #492. Best score 205 bits
Score difference with first non-orthologous sequence - A.darlingi:100 P.jiroveci:115

E3WUW1              	100.00%		L0PD63              	100.00%
Bootstrap support for E3WUW1 as seed ortholog is 99%.
Bootstrap support for L0PD63 as seed ortholog is 99%.

Group of orthologs #493. Best score 205 bits
Score difference with first non-orthologous sequence - A.darlingi:205 P.jiroveci:205

E3WVL9              	100.00%		L0PFS1              	100.00%
Bootstrap support for E3WVL9 as seed ortholog is 100%.
Bootstrap support for L0PFS1 as seed ortholog is 100%.

Group of orthologs #494. Best score 205 bits
Score difference with first non-orthologous sequence - A.darlingi:126 P.jiroveci:205

E3X4Q6              	100.00%		L0PE04              	100.00%
Bootstrap support for E3X4Q6 as seed ortholog is 99%.
Bootstrap support for L0PE04 as seed ortholog is 100%.

Group of orthologs #495. Best score 205 bits
Score difference with first non-orthologous sequence - A.darlingi:205 P.jiroveci:205

E3XBL2              	100.00%		L0PA86              	100.00%
Bootstrap support for E3XBL2 as seed ortholog is 100%.
Bootstrap support for L0PA86 as seed ortholog is 100%.

Group of orthologs #496. Best score 204 bits
Score difference with first non-orthologous sequence - A.darlingi:204 P.jiroveci:204

E3WV79              	100.00%		L0P9D6              	100.00%
Bootstrap support for E3WV79 as seed ortholog is 100%.
Bootstrap support for L0P9D6 as seed ortholog is 100%.

Group of orthologs #497. Best score 204 bits
Score difference with first non-orthologous sequence - A.darlingi:204 P.jiroveci:204

E3XAZ6              	100.00%		L0PD24              	100.00%
Bootstrap support for E3XAZ6 as seed ortholog is 100%.
Bootstrap support for L0PD24 as seed ortholog is 100%.

Group of orthologs #498. Best score 203 bits
Score difference with first non-orthologous sequence - A.darlingi:203 P.jiroveci:203

E3WKN8              	100.00%		L0P9Z4              	100.00%
Bootstrap support for E3WKN8 as seed ortholog is 100%.
Bootstrap support for L0P9Z4 as seed ortholog is 100%.

Group of orthologs #499. Best score 202 bits
Score difference with first non-orthologous sequence - A.darlingi:202 P.jiroveci:202

E3WZV7              	100.00%		L0PEY5              	100.00%
Bootstrap support for E3WZV7 as seed ortholog is 100%.
Bootstrap support for L0PEY5 as seed ortholog is 100%.

Group of orthologs #500. Best score 202 bits
Score difference with first non-orthologous sequence - A.darlingi:202 P.jiroveci:202

E3X6P1              	100.00%		L0PBY9              	100.00%
Bootstrap support for E3X6P1 as seed ortholog is 100%.
Bootstrap support for L0PBY9 as seed ortholog is 100%.

Group of orthologs #501. Best score 201 bits
Score difference with first non-orthologous sequence - A.darlingi:201 P.jiroveci:201

E3WMD8              	100.00%		L0P8F0              	100.00%
Bootstrap support for E3WMD8 as seed ortholog is 100%.
Bootstrap support for L0P8F0 as seed ortholog is 100%.

Group of orthologs #502. Best score 201 bits
Score difference with first non-orthologous sequence - A.darlingi:201 P.jiroveci:201

E3WJE9              	100.00%		L0PD35              	100.00%
Bootstrap support for E3WJE9 as seed ortholog is 100%.
Bootstrap support for L0PD35 as seed ortholog is 100%.

Group of orthologs #503. Best score 201 bits
Score difference with first non-orthologous sequence - A.darlingi:201 P.jiroveci:201

E3X8B0              	100.00%		L0PAC1              	100.00%
Bootstrap support for E3X8B0 as seed ortholog is 100%.
Bootstrap support for L0PAC1 as seed ortholog is 100%.

Group of orthologs #504. Best score 200 bits
Score difference with first non-orthologous sequence - A.darlingi:200 P.jiroveci:200

E3WYC7              	100.00%		L0PB84              	100.00%
Bootstrap support for E3WYC7 as seed ortholog is 100%.
Bootstrap support for L0PB84 as seed ortholog is 100%.

Group of orthologs #505. Best score 200 bits
Score difference with first non-orthologous sequence - A.darlingi:200 P.jiroveci:200

E3WW54              	100.00%		L0PE05              	100.00%
Bootstrap support for E3WW54 as seed ortholog is 100%.
Bootstrap support for L0PE05 as seed ortholog is 100%.

Group of orthologs #506. Best score 200 bits
Score difference with first non-orthologous sequence - A.darlingi:200 P.jiroveci:200

E3X795              	100.00%		L0P8G7              	100.00%
Bootstrap support for E3X795 as seed ortholog is 100%.
Bootstrap support for L0P8G7 as seed ortholog is 100%.

Group of orthologs #507. Best score 200 bits
Score difference with first non-orthologous sequence - A.darlingi:200 P.jiroveci:200

E3X7K4              	100.00%		L0PC53              	100.00%
Bootstrap support for E3X7K4 as seed ortholog is 100%.
Bootstrap support for L0PC53 as seed ortholog is 100%.

Group of orthologs #508. Best score 199 bits
Score difference with first non-orthologous sequence - A.darlingi:81 P.jiroveci:96

E3XA09              	100.00%		L0PGP6              	100.00%
Bootstrap support for E3XA09 as seed ortholog is 99%.
Bootstrap support for L0PGP6 as seed ortholog is 100%.

Group of orthologs #509. Best score 198 bits
Score difference with first non-orthologous sequence - A.darlingi:198 P.jiroveci:198

E3WKH7              	100.00%		L0PFP0              	100.00%
E3WU55              	32.49%		
E3X540              	7.94%		
Bootstrap support for E3WKH7 as seed ortholog is 100%.
Bootstrap support for L0PFP0 as seed ortholog is 100%.

Group of orthologs #510. Best score 198 bits
Score difference with first non-orthologous sequence - A.darlingi:198 P.jiroveci:198

E3WN78              	100.00%		L0PHK5              	100.00%
Bootstrap support for E3WN78 as seed ortholog is 100%.
Bootstrap support for L0PHK5 as seed ortholog is 100%.

Group of orthologs #511. Best score 198 bits
Score difference with first non-orthologous sequence - A.darlingi:107 P.jiroveci:133

E3X8M3              	100.00%		L0PAF0              	100.00%
Bootstrap support for E3X8M3 as seed ortholog is 99%.
Bootstrap support for L0PAF0 as seed ortholog is 99%.

Group of orthologs #512. Best score 197 bits
Score difference with first non-orthologous sequence - A.darlingi:197 P.jiroveci:197

E3WS60              	100.00%		L0PDS6              	100.00%
Bootstrap support for E3WS60 as seed ortholog is 100%.
Bootstrap support for L0PDS6 as seed ortholog is 100%.

Group of orthologs #513. Best score 197 bits
Score difference with first non-orthologous sequence - A.darlingi:197 P.jiroveci:197

E3WU61              	100.00%		L0PD65              	100.00%
Bootstrap support for E3WU61 as seed ortholog is 100%.
Bootstrap support for L0PD65 as seed ortholog is 100%.

Group of orthologs #514. Best score 197 bits
Score difference with first non-orthologous sequence - A.darlingi:197 P.jiroveci:197

E3WWK4              	100.00%		L0PDJ6              	100.00%
Bootstrap support for E3WWK4 as seed ortholog is 100%.
Bootstrap support for L0PDJ6 as seed ortholog is 100%.

Group of orthologs #515. Best score 197 bits
Score difference with first non-orthologous sequence - A.darlingi:197 P.jiroveci:121

E3X2E2              	100.00%		L0PFS8              	100.00%
Bootstrap support for E3X2E2 as seed ortholog is 100%.
Bootstrap support for L0PFS8 as seed ortholog is 100%.

Group of orthologs #516. Best score 196 bits
Score difference with first non-orthologous sequence - A.darlingi:196 P.jiroveci:196

E3WYB3              	100.00%		L0PB48              	100.00%
                    	       		L0PD43              	100.00%
Bootstrap support for E3WYB3 as seed ortholog is 100%.
Bootstrap support for L0PB48 as seed ortholog is 100%.
Bootstrap support for L0PD43 as seed ortholog is 100%.

Group of orthologs #517. Best score 196 bits
Score difference with first non-orthologous sequence - A.darlingi:123 P.jiroveci:196

E3WT68              	100.00%		L0PFQ3              	100.00%
Bootstrap support for E3WT68 as seed ortholog is 99%.
Bootstrap support for L0PFQ3 as seed ortholog is 100%.

Group of orthologs #518. Best score 196 bits
Score difference with first non-orthologous sequence - A.darlingi:196 P.jiroveci:196

E3XA55              	100.00%		L0PBT0              	100.00%
Bootstrap support for E3XA55 as seed ortholog is 100%.
Bootstrap support for L0PBT0 as seed ortholog is 100%.

Group of orthologs #519. Best score 195 bits
Score difference with first non-orthologous sequence - A.darlingi:195 P.jiroveci:73

E3WU78              	100.00%		L0PDS3              	100.00%
Bootstrap support for E3WU78 as seed ortholog is 100%.
Bootstrap support for L0PDS3 as seed ortholog is 97%.

Group of orthologs #520. Best score 195 bits
Score difference with first non-orthologous sequence - A.darlingi:195 P.jiroveci:111

E3X175              	100.00%		L0P839              	100.00%
Bootstrap support for E3X175 as seed ortholog is 100%.
Bootstrap support for L0P839 as seed ortholog is 99%.

Group of orthologs #521. Best score 194 bits
Score difference with first non-orthologous sequence - A.darlingi:194 P.jiroveci:194

E3X0M3              	100.00%		L0PD58              	100.00%
E3WSJ5              	91.89%		
Bootstrap support for E3X0M3 as seed ortholog is 100%.
Bootstrap support for L0PD58 as seed ortholog is 100%.

Group of orthologs #522. Best score 193 bits
Score difference with first non-orthologous sequence - A.darlingi:123 P.jiroveci:193

E3WNX6              	100.00%		L0P9I3              	100.00%
Bootstrap support for E3WNX6 as seed ortholog is 99%.
Bootstrap support for L0P9I3 as seed ortholog is 100%.

Group of orthologs #523. Best score 193 bits
Score difference with first non-orthologous sequence - A.darlingi:193 P.jiroveci:193

E3X8Y7              	100.00%		L0PFR9              	100.00%
Bootstrap support for E3X8Y7 as seed ortholog is 100%.
Bootstrap support for L0PFR9 as seed ortholog is 100%.

Group of orthologs #524. Best score 192 bits
Score difference with first non-orthologous sequence - A.darlingi:47 P.jiroveci:4

E3WQ47              	100.00%		L0PCN5              	100.00%
E3X192              	7.77%		L0P7B6              	92.77%
Bootstrap support for E3WQ47 as seed ortholog is 85%.
Bootstrap support for L0PCN5 as seed ortholog is 53%.
Alternative seed ortholog is L0PGT4 (4 bits away from this cluster)

Group of orthologs #525. Best score 192 bits
Score difference with first non-orthologous sequence - A.darlingi:192 P.jiroveci:192

E3WT13              	100.00%		L0PFL8              	100.00%
Bootstrap support for E3WT13 as seed ortholog is 100%.
Bootstrap support for L0PFL8 as seed ortholog is 100%.

Group of orthologs #526. Best score 191 bits
Score difference with first non-orthologous sequence - A.darlingi:191 P.jiroveci:144

E3WJ12              	100.00%		L0P7B2              	100.00%
                    	       		L0P9D3              	98.94%
Bootstrap support for E3WJ12 as seed ortholog is 100%.
Bootstrap support for L0P7B2 as seed ortholog is 99%.

Group of orthologs #527. Best score 191 bits
Score difference with first non-orthologous sequence - A.darlingi:191 P.jiroveci:191

E3WKN7              	100.00%		L0PCB3              	100.00%
Bootstrap support for E3WKN7 as seed ortholog is 100%.
Bootstrap support for L0PCB3 as seed ortholog is 100%.

Group of orthologs #528. Best score 191 bits
Score difference with first non-orthologous sequence - A.darlingi:48 P.jiroveci:191

E3WPX9              	100.00%		L0PBL5              	100.00%
Bootstrap support for E3WPX9 as seed ortholog is 89%.
Bootstrap support for L0PBL5 as seed ortholog is 100%.

Group of orthologs #529. Best score 191 bits
Score difference with first non-orthologous sequence - A.darlingi:80 P.jiroveci:191

E3X117              	100.00%		L0PFZ1              	100.00%
Bootstrap support for E3X117 as seed ortholog is 89%.
Bootstrap support for L0PFZ1 as seed ortholog is 100%.

Group of orthologs #530. Best score 190 bits
Score difference with first non-orthologous sequence - A.darlingi:190 P.jiroveci:190

E3X6C5              	100.00%		L0PDI2              	100.00%
Bootstrap support for E3X6C5 as seed ortholog is 100%.
Bootstrap support for L0PDI2 as seed ortholog is 100%.

Group of orthologs #531. Best score 189 bits
Score difference with first non-orthologous sequence - A.darlingi:189 P.jiroveci:189

E3WRV1              	100.00%		L0PFE1              	100.00%
Bootstrap support for E3WRV1 as seed ortholog is 100%.
Bootstrap support for L0PFE1 as seed ortholog is 100%.

Group of orthologs #532. Best score 189 bits
Score difference with first non-orthologous sequence - A.darlingi:189 P.jiroveci:189

E3X6W6              	100.00%		L0PFE6              	100.00%
Bootstrap support for E3X6W6 as seed ortholog is 100%.
Bootstrap support for L0PFE6 as seed ortholog is 100%.

Group of orthologs #533. Best score 189 bits
Score difference with first non-orthologous sequence - A.darlingi:189 P.jiroveci:189

E3XFT4              	100.00%		L0P901              	100.00%
Bootstrap support for E3XFT4 as seed ortholog is 100%.
Bootstrap support for L0P901 as seed ortholog is 100%.

Group of orthologs #534. Best score 188 bits
Score difference with first non-orthologous sequence - A.darlingi:188 P.jiroveci:188

E3WZE2              	100.00%		L0PHH2              	100.00%
E3WW95              	13.27%		
Bootstrap support for E3WZE2 as seed ortholog is 100%.
Bootstrap support for L0PHH2 as seed ortholog is 100%.

Group of orthologs #535. Best score 188 bits
Score difference with first non-orthologous sequence - A.darlingi:188 P.jiroveci:188

E3WW63              	100.00%		L0PCU0              	100.00%
Bootstrap support for E3WW63 as seed ortholog is 100%.
Bootstrap support for L0PCU0 as seed ortholog is 100%.

Group of orthologs #536. Best score 188 bits
Score difference with first non-orthologous sequence - A.darlingi:188 P.jiroveci:188

E3WS39              	100.00%		L0PIC6              	100.00%
Bootstrap support for E3WS39 as seed ortholog is 100%.
Bootstrap support for L0PIC6 as seed ortholog is 100%.

Group of orthologs #537. Best score 188 bits
Score difference with first non-orthologous sequence - A.darlingi:188 P.jiroveci:188

E3X1Q3              	100.00%		L0PB66              	100.00%
Bootstrap support for E3X1Q3 as seed ortholog is 100%.
Bootstrap support for L0PB66 as seed ortholog is 100%.

Group of orthologs #538. Best score 188 bits
Score difference with first non-orthologous sequence - A.darlingi:188 P.jiroveci:188

E3X8M7              	100.00%		L0P7N5              	100.00%
Bootstrap support for E3X8M7 as seed ortholog is 100%.
Bootstrap support for L0P7N5 as seed ortholog is 100%.

Group of orthologs #539. Best score 187 bits
Score difference with first non-orthologous sequence - A.darlingi:187 P.jiroveci:187

E3WWA0              	100.00%		L0P9U1              	100.00%
Bootstrap support for E3WWA0 as seed ortholog is 100%.
Bootstrap support for L0P9U1 as seed ortholog is 100%.

Group of orthologs #540. Best score 187 bits
Score difference with first non-orthologous sequence - A.darlingi:187 P.jiroveci:187

E3WSG4              	100.00%		L0PGD9              	100.00%
Bootstrap support for E3WSG4 as seed ortholog is 100%.
Bootstrap support for L0PGD9 as seed ortholog is 100%.

Group of orthologs #541. Best score 186 bits
Score difference with first non-orthologous sequence - A.darlingi:120 P.jiroveci:97

E3X9M1              	100.00%		L0PDC4              	100.00%
                    	       		L0PBK4              	8.74%
Bootstrap support for E3X9M1 as seed ortholog is 99%.
Bootstrap support for L0PDC4 as seed ortholog is 99%.

Group of orthologs #542. Best score 186 bits
Score difference with first non-orthologous sequence - A.darlingi:90 P.jiroveci:186

E3WQ17              	100.00%		L0PF53              	100.00%
Bootstrap support for E3WQ17 as seed ortholog is 99%.
Bootstrap support for L0PF53 as seed ortholog is 100%.

Group of orthologs #543. Best score 186 bits
Score difference with first non-orthologous sequence - A.darlingi:104 P.jiroveci:130

E3X3M3              	100.00%		L0PCG1              	100.00%
Bootstrap support for E3X3M3 as seed ortholog is 100%.
Bootstrap support for L0PCG1 as seed ortholog is 99%.

Group of orthologs #544. Best score 186 bits
Score difference with first non-orthologous sequence - A.darlingi:186 P.jiroveci:186

E3XB77              	100.00%		L0PD40              	100.00%
Bootstrap support for E3XB77 as seed ortholog is 100%.
Bootstrap support for L0PD40 as seed ortholog is 100%.

Group of orthologs #545. Best score 185 bits
Score difference with first non-orthologous sequence - A.darlingi:185 P.jiroveci:185

E3WP36              	100.00%		L0PFV3              	100.00%
Bootstrap support for E3WP36 as seed ortholog is 100%.
Bootstrap support for L0PFV3 as seed ortholog is 100%.

Group of orthologs #546. Best score 185 bits
Score difference with first non-orthologous sequence - A.darlingi:185 P.jiroveci:185

E3XA90              	100.00%		L0PDW5              	100.00%
Bootstrap support for E3XA90 as seed ortholog is 100%.
Bootstrap support for L0PDW5 as seed ortholog is 100%.

Group of orthologs #547. Best score 185 bits
Score difference with first non-orthologous sequence - A.darlingi:64 P.jiroveci:96

E3XFW1              	100.00%		L0PAY4              	100.00%
Bootstrap support for E3XFW1 as seed ortholog is 99%.
Bootstrap support for L0PAY4 as seed ortholog is 100%.

Group of orthologs #548. Best score 184 bits
Score difference with first non-orthologous sequence - A.darlingi:14 P.jiroveci:184

E3XFE2              	100.00%		L0P967              	100.00%
Bootstrap support for E3XFE2 as seed ortholog is 62%.
Alternative seed ortholog is E3XA66 (14 bits away from this cluster)
Bootstrap support for L0P967 as seed ortholog is 100%.

Group of orthologs #549. Best score 183 bits
Score difference with first non-orthologous sequence - A.darlingi:183 P.jiroveci:54

E3X1F5              	100.00%		L0PGX9              	100.00%
Bootstrap support for E3X1F5 as seed ortholog is 100%.
Bootstrap support for L0PGX9 as seed ortholog is 92%.

Group of orthologs #550. Best score 182 bits
Score difference with first non-orthologous sequence - A.darlingi:90 P.jiroveci:68

E3X3Z5              	100.00%		L0PCC3              	100.00%
Bootstrap support for E3X3Z5 as seed ortholog is 99%.
Bootstrap support for L0PCC3 as seed ortholog is 99%.

Group of orthologs #551. Best score 181 bits
Score difference with first non-orthologous sequence - A.darlingi:77 P.jiroveci:181

E3X664              	100.00%		L0PG76              	100.00%
                    	       		L0PE70              	54.22%
Bootstrap support for E3X664 as seed ortholog is 97%.
Bootstrap support for L0PG76 as seed ortholog is 100%.

Group of orthologs #552. Best score 181 bits
Score difference with first non-orthologous sequence - A.darlingi:181 P.jiroveci:181

E3WWG3              	100.00%		L0PGF9              	100.00%
Bootstrap support for E3WWG3 as seed ortholog is 100%.
Bootstrap support for L0PGF9 as seed ortholog is 100%.

Group of orthologs #553. Best score 181 bits
Score difference with first non-orthologous sequence - A.darlingi:181 P.jiroveci:181

E3WZH5              	100.00%		L0PDM9              	100.00%
Bootstrap support for E3WZH5 as seed ortholog is 100%.
Bootstrap support for L0PDM9 as seed ortholog is 100%.

Group of orthologs #554. Best score 181 bits
Score difference with first non-orthologous sequence - A.darlingi:181 P.jiroveci:181

E3X5N1              	100.00%		L0P8R6              	100.00%
Bootstrap support for E3X5N1 as seed ortholog is 100%.
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #555. Best score 180 bits
Score difference with first non-orthologous sequence - A.darlingi:180 P.jiroveci:129

E3WRC6              	100.00%		L0PC80              	100.00%
Bootstrap support for E3WRC6 as seed ortholog is 100%.
Bootstrap support for L0PC80 as seed ortholog is 100%.

Group of orthologs #556. Best score 180 bits
Score difference with first non-orthologous sequence - A.darlingi:27 P.jiroveci:180

E3XAY2              	100.00%		L0PDF9              	100.00%
Bootstrap support for E3XAY2 as seed ortholog is 98%.
Bootstrap support for L0PDF9 as seed ortholog is 100%.

Group of orthologs #557. Best score 180 bits
Score difference with first non-orthologous sequence - A.darlingi:180 P.jiroveci:180

E3XFL3              	100.00%		L0PA07              	100.00%
Bootstrap support for E3XFL3 as seed ortholog is 100%.
Bootstrap support for L0PA07 as seed ortholog is 100%.

Group of orthologs #558. Best score 179 bits
Score difference with first non-orthologous sequence - A.darlingi:179 P.jiroveci:179

E3XA68              	100.00%		L0PE09              	100.00%
Bootstrap support for E3XA68 as seed ortholog is 100%.
Bootstrap support for L0PE09 as seed ortholog is 100%.

Group of orthologs #559. Best score 178 bits
Score difference with first non-orthologous sequence - A.darlingi:178 P.jiroveci:178

E3XBD4              	100.00%		L0PE53              	100.00%
E3WYK3              	36.90%		
Bootstrap support for E3XBD4 as seed ortholog is 100%.
Bootstrap support for L0PE53 as seed ortholog is 100%.

Group of orthologs #560. Best score 178 bits
Score difference with first non-orthologous sequence - A.darlingi:55 P.jiroveci:47

E3WKL2              	100.00%		L0PDN2              	100.00%
Bootstrap support for E3WKL2 as seed ortholog is 89%.
Bootstrap support for L0PDN2 as seed ortholog is 84%.

Group of orthologs #561. Best score 178 bits
Score difference with first non-orthologous sequence - A.darlingi:178 P.jiroveci:178

E3X231              	100.00%		L0PGJ6              	100.00%
Bootstrap support for E3X231 as seed ortholog is 100%.
Bootstrap support for L0PGJ6 as seed ortholog is 100%.

Group of orthologs #562. Best score 178 bits
Score difference with first non-orthologous sequence - A.darlingi:178 P.jiroveci:178

E3XFG8              	100.00%		L0PE85              	100.00%
Bootstrap support for E3XFG8 as seed ortholog is 100%.
Bootstrap support for L0PE85 as seed ortholog is 100%.

Group of orthologs #563. Best score 177 bits
Score difference with first non-orthologous sequence - A.darlingi:42 P.jiroveci:177

E3XAL8              	100.00%		L0PAP9              	100.00%
Bootstrap support for E3XAL8 as seed ortholog is 98%.
Bootstrap support for L0PAP9 as seed ortholog is 100%.

Group of orthologs #564. Best score 177 bits
Score difference with first non-orthologous sequence - A.darlingi:177 P.jiroveci:115

E3XF11              	100.00%		L0PA51              	100.00%
Bootstrap support for E3XF11 as seed ortholog is 100%.
Bootstrap support for L0PA51 as seed ortholog is 100%.

Group of orthologs #565. Best score 176 bits
Score difference with first non-orthologous sequence - A.darlingi:102 P.jiroveci:176

E3WR50              	100.00%		L0P838              	100.00%
Bootstrap support for E3WR50 as seed ortholog is 99%.
Bootstrap support for L0P838 as seed ortholog is 100%.

Group of orthologs #566. Best score 175 bits
Score difference with first non-orthologous sequence - A.darlingi:175 P.jiroveci:175

E3WMG6              	100.00%		L0PDN4              	100.00%
Bootstrap support for E3WMG6 as seed ortholog is 100%.
Bootstrap support for L0PDN4 as seed ortholog is 100%.

Group of orthologs #567. Best score 174 bits
Score difference with first non-orthologous sequence - A.darlingi:174 P.jiroveci:174

E3WUX4              	100.00%		L0P740              	100.00%
Bootstrap support for E3WUX4 as seed ortholog is 100%.
Bootstrap support for L0P740 as seed ortholog is 100%.

Group of orthologs #568. Best score 174 bits
Score difference with first non-orthologous sequence - A.darlingi:174 P.jiroveci:174

E3XA42              	100.00%		L0PC06              	100.00%
Bootstrap support for E3XA42 as seed ortholog is 100%.
Bootstrap support for L0PC06 as seed ortholog is 100%.

Group of orthologs #569. Best score 173 bits
Score difference with first non-orthologous sequence - A.darlingi:173 P.jiroveci:173

E3WUZ7              	100.00%		L0PB24              	100.00%
Bootstrap support for E3WUZ7 as seed ortholog is 100%.
Bootstrap support for L0PB24 as seed ortholog is 100%.

Group of orthologs #570. Best score 173 bits
Score difference with first non-orthologous sequence - A.darlingi:68 P.jiroveci:109

E3WXL3              	100.00%		L0PB47              	100.00%
Bootstrap support for E3WXL3 as seed ortholog is 96%.
Bootstrap support for L0PB47 as seed ortholog is 99%.

Group of orthologs #571. Best score 173 bits
Score difference with first non-orthologous sequence - A.darlingi:173 P.jiroveci:173

E3WVJ8              	100.00%		L0PEX9              	100.00%
Bootstrap support for E3WVJ8 as seed ortholog is 100%.
Bootstrap support for L0PEX9 as seed ortholog is 100%.

Group of orthologs #572. Best score 173 bits
Score difference with first non-orthologous sequence - A.darlingi:173 P.jiroveci:173

E3X9F9              	100.00%		L0PD41              	100.00%
Bootstrap support for E3X9F9 as seed ortholog is 100%.
Bootstrap support for L0PD41 as seed ortholog is 100%.

Group of orthologs #573. Best score 172 bits
Score difference with first non-orthologous sequence - A.darlingi:73 P.jiroveci:39

E3WWS5              	100.00%		L0PAS2              	100.00%
Bootstrap support for E3WWS5 as seed ortholog is 99%.
Bootstrap support for L0PAS2 as seed ortholog is 95%.

Group of orthologs #574. Best score 172 bits
Score difference with first non-orthologous sequence - A.darlingi:172 P.jiroveci:172

E3X573              	100.00%		L0PEA1              	100.00%
Bootstrap support for E3X573 as seed ortholog is 100%.
Bootstrap support for L0PEA1 as seed ortholog is 100%.

Group of orthologs #575. Best score 171 bits
Score difference with first non-orthologous sequence - A.darlingi:171 P.jiroveci:171

E3X2N2              	100.00%		L0PBL8              	100.00%
                    	       		L0PDU3              	68.73%
Bootstrap support for E3X2N2 as seed ortholog is 100%.
Bootstrap support for L0PBL8 as seed ortholog is 100%.

Group of orthologs #576. Best score 171 bits
Score difference with first non-orthologous sequence - A.darlingi:171 P.jiroveci:171

E3X7F8              	100.00%		L0PAM3              	100.00%
Bootstrap support for E3X7F8 as seed ortholog is 100%.
Bootstrap support for L0PAM3 as seed ortholog is 100%.

Group of orthologs #577. Best score 170 bits
Score difference with first non-orthologous sequence - A.darlingi:96 P.jiroveci:170

E3WUX6              	100.00%		L0PFZ6              	100.00%
                    	       		L0P7L2              	96.16%
Bootstrap support for E3WUX6 as seed ortholog is 99%.
Bootstrap support for L0PFZ6 as seed ortholog is 100%.

Group of orthologs #578. Best score 170 bits
Score difference with first non-orthologous sequence - A.darlingi:170 P.jiroveci:170

E3X8J6              	100.00%		L0PFH7              	100.00%
Bootstrap support for E3X8J6 as seed ortholog is 100%.
Bootstrap support for L0PFH7 as seed ortholog is 100%.

Group of orthologs #579. Best score 169 bits
Score difference with first non-orthologous sequence - A.darlingi:169 P.jiroveci:169

E3WJ19              	100.00%		L0P835              	100.00%
                    	       		L0P8K6              	44.40%
Bootstrap support for E3WJ19 as seed ortholog is 100%.
Bootstrap support for L0P835 as seed ortholog is 100%.

Group of orthologs #580. Best score 169 bits
Score difference with first non-orthologous sequence - A.darlingi:110 P.jiroveci:169

E3WXS4              	100.00%		L0PBU7              	100.00%
Bootstrap support for E3WXS4 as seed ortholog is 100%.
Bootstrap support for L0PBU7 as seed ortholog is 100%.

Group of orthologs #581. Best score 169 bits
Score difference with first non-orthologous sequence - A.darlingi:169 P.jiroveci:169

E3XD91              	100.00%		L0PBZ1              	100.00%
Bootstrap support for E3XD91 as seed ortholog is 100%.
Bootstrap support for L0PBZ1 as seed ortholog is 100%.

Group of orthologs #582. Best score 168 bits
Score difference with first non-orthologous sequence - A.darlingi:168 P.jiroveci:168

E3X9E7              	100.00%		L0PC60              	100.00%
                    	       		L0P8Z0              	53.43%
Bootstrap support for E3X9E7 as seed ortholog is 100%.
Bootstrap support for L0PC60 as seed ortholog is 100%.

Group of orthologs #583. Best score 168 bits
Score difference with first non-orthologous sequence - A.darlingi:168 P.jiroveci:168

E3WLN7              	100.00%		L0PDL5              	100.00%
Bootstrap support for E3WLN7 as seed ortholog is 100%.
Bootstrap support for L0PDL5 as seed ortholog is 100%.

Group of orthologs #584. Best score 168 bits
Score difference with first non-orthologous sequence - A.darlingi:168 P.jiroveci:168

E3WYC5              	100.00%		L0P8Y0              	100.00%
Bootstrap support for E3WYC5 as seed ortholog is 100%.
Bootstrap support for L0P8Y0 as seed ortholog is 100%.

Group of orthologs #585. Best score 168 bits
Score difference with first non-orthologous sequence - A.darlingi:77 P.jiroveci:48

E3X627              	100.00%		L0PGT3              	100.00%
Bootstrap support for E3X627 as seed ortholog is 99%.
Bootstrap support for L0PGT3 as seed ortholog is 97%.

Group of orthologs #586. Best score 168 bits
Score difference with first non-orthologous sequence - A.darlingi:168 P.jiroveci:168

E3XDI6              	100.00%		L0PBU8              	100.00%
Bootstrap support for E3XDI6 as seed ortholog is 100%.
Bootstrap support for L0PBU8 as seed ortholog is 100%.

Group of orthologs #587. Best score 167 bits
Score difference with first non-orthologous sequence - A.darlingi:167 P.jiroveci:167

E3WLW8              	100.00%		L0PAR8              	100.00%
Bootstrap support for E3WLW8 as seed ortholog is 100%.
Bootstrap support for L0PAR8 as seed ortholog is 100%.

Group of orthologs #588. Best score 167 bits
Score difference with first non-orthologous sequence - A.darlingi:167 P.jiroveci:167

E3WZK2              	100.00%		L0PBH6              	100.00%
Bootstrap support for E3WZK2 as seed ortholog is 100%.
Bootstrap support for L0PBH6 as seed ortholog is 100%.

Group of orthologs #589. Best score 167 bits
Score difference with first non-orthologous sequence - A.darlingi:167 P.jiroveci:167

E3XEG0              	100.00%		L0P6R0              	100.00%
Bootstrap support for E3XEG0 as seed ortholog is 100%.
Bootstrap support for L0P6R0 as seed ortholog is 100%.

Group of orthologs #590. Best score 167 bits
Score difference with first non-orthologous sequence - A.darlingi:113 P.jiroveci:167

E3XBX0              	100.00%		L0PBX0              	100.00%
Bootstrap support for E3XBX0 as seed ortholog is 99%.
Bootstrap support for L0PBX0 as seed ortholog is 100%.

Group of orthologs #591. Best score 166 bits
Score difference with first non-orthologous sequence - A.darlingi:166 P.jiroveci:166

E3WKZ2              	100.00%		L0P9I0              	100.00%
Bootstrap support for E3WKZ2 as seed ortholog is 100%.
Bootstrap support for L0P9I0 as seed ortholog is 100%.

Group of orthologs #592. Best score 166 bits
Score difference with first non-orthologous sequence - A.darlingi:166 P.jiroveci:166

E3X6A2              	100.00%		L0PAM5              	100.00%
Bootstrap support for E3X6A2 as seed ortholog is 100%.
Bootstrap support for L0PAM5 as seed ortholog is 100%.

Group of orthologs #593. Best score 166 bits
Score difference with first non-orthologous sequence - A.darlingi:166 P.jiroveci:166

E3X9Z3              	100.00%		L0P805              	100.00%
Bootstrap support for E3X9Z3 as seed ortholog is 100%.
Bootstrap support for L0P805 as seed ortholog is 100%.

Group of orthologs #594. Best score 165 bits
Score difference with first non-orthologous sequence - A.darlingi:41 P.jiroveci:96

E3X8U8              	100.00%		L0PDG6              	100.00%
E3XFE0              	59.74%		
Bootstrap support for E3X8U8 as seed ortholog is 88%.
Bootstrap support for L0PDG6 as seed ortholog is 99%.

Group of orthologs #595. Best score 165 bits
Score difference with first non-orthologous sequence - A.darlingi:165 P.jiroveci:165

B6DDS4              	100.00%		L0P9N4              	100.00%
Bootstrap support for B6DDS4 as seed ortholog is 100%.
Bootstrap support for L0P9N4 as seed ortholog is 100%.

Group of orthologs #596. Best score 164 bits
Score difference with first non-orthologous sequence - A.darlingi:33 P.jiroveci:164

E3WZM0              	100.00%		L0P848              	100.00%
E3WRJ2              	16.40%		L0P867              	90.67%
Bootstrap support for E3WZM0 as seed ortholog is 79%.
Bootstrap support for L0P848 as seed ortholog is 100%.

Group of orthologs #597. Best score 164 bits
Score difference with first non-orthologous sequence - A.darlingi:164 P.jiroveci:164

E3WJI1              	100.00%		L0PFY9              	100.00%
Bootstrap support for E3WJI1 as seed ortholog is 100%.
Bootstrap support for L0PFY9 as seed ortholog is 100%.

Group of orthologs #598. Best score 164 bits
Score difference with first non-orthologous sequence - A.darlingi:164 P.jiroveci:164

E3WYW7              	100.00%		L0PBI9              	100.00%
Bootstrap support for E3WYW7 as seed ortholog is 100%.
Bootstrap support for L0PBI9 as seed ortholog is 100%.

Group of orthologs #599. Best score 164 bits
Score difference with first non-orthologous sequence - A.darlingi:164 P.jiroveci:164

E3X2H4              	100.00%		L0PBC8              	100.00%
Bootstrap support for E3X2H4 as seed ortholog is 100%.
Bootstrap support for L0PBC8 as seed ortholog is 100%.

Group of orthologs #600. Best score 164 bits
Score difference with first non-orthologous sequence - A.darlingi:164 P.jiroveci:62

E3XD41              	100.00%		L0PFW9              	100.00%
Bootstrap support for E3XD41 as seed ortholog is 100%.
Bootstrap support for L0PFW9 as seed ortholog is 99%.

Group of orthologs #601. Best score 163 bits
Score difference with first non-orthologous sequence - A.darlingi:163 P.jiroveci:163

E3WKV7              	100.00%		L0PD51              	100.00%
Bootstrap support for E3WKV7 as seed ortholog is 100%.
Bootstrap support for L0PD51 as seed ortholog is 100%.

Group of orthologs #602. Best score 163 bits
Score difference with first non-orthologous sequence - A.darlingi:72 P.jiroveci:99

E3X2F0              	100.00%		L0PDE1              	100.00%
Bootstrap support for E3X2F0 as seed ortholog is 98%.
Bootstrap support for L0PDE1 as seed ortholog is 99%.

Group of orthologs #603. Best score 163 bits
Score difference with first non-orthologous sequence - A.darlingi:163 P.jiroveci:163

E3XBW8              	100.00%		L0PFX5              	100.00%
Bootstrap support for E3XBW8 as seed ortholog is 100%.
Bootstrap support for L0PFX5 as seed ortholog is 100%.

Group of orthologs #604. Best score 162 bits
Score difference with first non-orthologous sequence - A.darlingi:105 P.jiroveci:115

E3WP78              	100.00%		L0PFE3              	100.00%
Bootstrap support for E3WP78 as seed ortholog is 99%.
Bootstrap support for L0PFE3 as seed ortholog is 99%.

Group of orthologs #605. Best score 162 bits
Score difference with first non-orthologous sequence - A.darlingi:100 P.jiroveci:162

E3X402              	100.00%		L0PDB2              	100.00%
Bootstrap support for E3X402 as seed ortholog is 99%.
Bootstrap support for L0PDB2 as seed ortholog is 100%.

Group of orthologs #606. Best score 161 bits
Score difference with first non-orthologous sequence - A.darlingi:161 P.jiroveci:161

E3WN20              	100.00%		L0P8D5              	100.00%
Bootstrap support for E3WN20 as seed ortholog is 100%.
Bootstrap support for L0P8D5 as seed ortholog is 100%.

Group of orthologs #607. Best score 161 bits
Score difference with first non-orthologous sequence - A.darlingi:161 P.jiroveci:161

E3WMW9              	100.00%		L0PA78              	100.00%
Bootstrap support for E3WMW9 as seed ortholog is 100%.
Bootstrap support for L0PA78 as seed ortholog is 100%.

Group of orthologs #608. Best score 161 bits
Score difference with first non-orthologous sequence - A.darlingi:88 P.jiroveci:74

E3X4I9              	100.00%		L0P9T6              	100.00%
Bootstrap support for E3X4I9 as seed ortholog is 99%.
Bootstrap support for L0P9T6 as seed ortholog is 99%.

Group of orthologs #609. Best score 161 bits
Score difference with first non-orthologous sequence - A.darlingi:161 P.jiroveci:161

E3WZY4              	100.00%		L0PGZ5              	100.00%
Bootstrap support for E3WZY4 as seed ortholog is 100%.
Bootstrap support for L0PGZ5 as seed ortholog is 100%.

Group of orthologs #610. Best score 161 bits
Score difference with first non-orthologous sequence - A.darlingi:108 P.jiroveci:161

E3X8V1              	100.00%		L0PFW7              	100.00%
Bootstrap support for E3X8V1 as seed ortholog is 99%.
Bootstrap support for L0PFW7 as seed ortholog is 100%.

Group of orthologs #611. Best score 160 bits
Score difference with first non-orthologous sequence - A.darlingi:25 P.jiroveci:20

E3WRP6              	100.00%		L0P8M4              	100.00%
Bootstrap support for E3WRP6 as seed ortholog is 82%.
Bootstrap support for L0P8M4 as seed ortholog is 80%.

Group of orthologs #612. Best score 160 bits
Score difference with first non-orthologous sequence - A.darlingi:160 P.jiroveci:160

E3X0U8              	100.00%		L0PB62              	100.00%
Bootstrap support for E3X0U8 as seed ortholog is 100%.
Bootstrap support for L0PB62 as seed ortholog is 100%.

Group of orthologs #613. Best score 159 bits
Score difference with first non-orthologous sequence - A.darlingi:159 P.jiroveci:159

E3WP91              	100.00%		L0PAL5              	100.00%
Bootstrap support for E3WP91 as seed ortholog is 100%.
Bootstrap support for L0PAL5 as seed ortholog is 100%.

Group of orthologs #614. Best score 159 bits
Score difference with first non-orthologous sequence - A.darlingi:21 P.jiroveci:48

E3WUI5              	100.00%		L0P9H7              	100.00%
Bootstrap support for E3WUI5 as seed ortholog is 78%.
Bootstrap support for L0P9H7 as seed ortholog is 95%.

Group of orthologs #615. Best score 159 bits
Score difference with first non-orthologous sequence - A.darlingi:159 P.jiroveci:97

E3X413              	100.00%		L0PD33              	100.00%
Bootstrap support for E3X413 as seed ortholog is 100%.
Bootstrap support for L0PD33 as seed ortholog is 99%.

Group of orthologs #616. Best score 159 bits
Score difference with first non-orthologous sequence - A.darlingi:159 P.jiroveci:159

E3XDZ2              	100.00%		L0P8C9              	100.00%
Bootstrap support for E3XDZ2 as seed ortholog is 100%.
Bootstrap support for L0P8C9 as seed ortholog is 100%.

Group of orthologs #617. Best score 159 bits
Score difference with first non-orthologous sequence - A.darlingi:159 P.jiroveci:159

E3X8K8              	100.00%		L0PGK0              	100.00%
Bootstrap support for E3X8K8 as seed ortholog is 100%.
Bootstrap support for L0PGK0 as seed ortholog is 100%.

Group of orthologs #618. Best score 158 bits
Score difference with first non-orthologous sequence - A.darlingi:158 P.jiroveci:158

E3WYS3              	100.00%		L0PCP9              	100.00%
Bootstrap support for E3WYS3 as seed ortholog is 100%.
Bootstrap support for L0PCP9 as seed ortholog is 100%.

Group of orthologs #619. Best score 158 bits
Score difference with first non-orthologous sequence - A.darlingi:158 P.jiroveci:158

E3X4J0              	100.00%		L0PGW6              	100.00%
Bootstrap support for E3X4J0 as seed ortholog is 100%.
Bootstrap support for L0PGW6 as seed ortholog is 100%.

Group of orthologs #620. Best score 157 bits
Score difference with first non-orthologous sequence - A.darlingi:157 P.jiroveci:157

E3X1E3              	100.00%		L0P9N2              	100.00%
Bootstrap support for E3X1E3 as seed ortholog is 100%.
Bootstrap support for L0P9N2 as seed ortholog is 100%.

Group of orthologs #621. Best score 157 bits
Score difference with first non-orthologous sequence - A.darlingi:82 P.jiroveci:96

E3X145              	100.00%		L0PAZ8              	100.00%
Bootstrap support for E3X145 as seed ortholog is 99%.
Bootstrap support for L0PAZ8 as seed ortholog is 99%.

Group of orthologs #622. Best score 157 bits
Score difference with first non-orthologous sequence - A.darlingi:157 P.jiroveci:157

E3XG04              	100.00%		L0PEG0              	100.00%
Bootstrap support for E3XG04 as seed ortholog is 100%.
Bootstrap support for L0PEG0 as seed ortholog is 100%.

Group of orthologs #623. Best score 156 bits
Score difference with first non-orthologous sequence - A.darlingi:156 P.jiroveci:156

E3WJ17              	100.00%		L0PEN3              	100.00%
Bootstrap support for E3WJ17 as seed ortholog is 100%.
Bootstrap support for L0PEN3 as seed ortholog is 100%.

Group of orthologs #624. Best score 156 bits
Score difference with first non-orthologous sequence - A.darlingi:156 P.jiroveci:156

E3WTY8              	100.00%		L0PCV5              	100.00%
Bootstrap support for E3WTY8 as seed ortholog is 100%.
Bootstrap support for L0PCV5 as seed ortholog is 100%.

Group of orthologs #625. Best score 155 bits
Score difference with first non-orthologous sequence - A.darlingi:155 P.jiroveci:155

E3WM75              	100.00%		L0PAF8              	100.00%
                    	       		L0PGI7              	57.43%
Bootstrap support for E3WM75 as seed ortholog is 100%.
Bootstrap support for L0PAF8 as seed ortholog is 100%.

Group of orthologs #626. Best score 155 bits
Score difference with first non-orthologous sequence - A.darlingi:155 P.jiroveci:155

E3X410              	100.00%		L0PB81              	100.00%
Bootstrap support for E3X410 as seed ortholog is 100%.
Bootstrap support for L0PB81 as seed ortholog is 100%.

Group of orthologs #627. Best score 155 bits
Score difference with first non-orthologous sequence - A.darlingi:155 P.jiroveci:155

E3XFD4              	100.00%		L0PBL3              	100.00%
Bootstrap support for E3XFD4 as seed ortholog is 100%.
Bootstrap support for L0PBL3 as seed ortholog is 100%.

Group of orthologs #628. Best score 155 bits
Score difference with first non-orthologous sequence - A.darlingi:155 P.jiroveci:155

E3XE50              	100.00%		L0PG54              	100.00%
Bootstrap support for E3XE50 as seed ortholog is 100%.
Bootstrap support for L0PG54 as seed ortholog is 100%.

Group of orthologs #629. Best score 154 bits
Score difference with first non-orthologous sequence - A.darlingi:154 P.jiroveci:154

E3XB96              	100.00%		L0PCF8              	100.00%
Bootstrap support for E3XB96 as seed ortholog is 100%.
Bootstrap support for L0PCF8 as seed ortholog is 100%.

Group of orthologs #630. Best score 154 bits
Score difference with first non-orthologous sequence - A.darlingi:154 P.jiroveci:154

E3XEQ7              	100.00%		L0PCG3              	100.00%
Bootstrap support for E3XEQ7 as seed ortholog is 100%.
Bootstrap support for L0PCG3 as seed ortholog is 100%.

Group of orthologs #631. Best score 154 bits
Score difference with first non-orthologous sequence - A.darlingi:154 P.jiroveci:154

E3XCK4              	100.00%		L0PFJ7              	100.00%
Bootstrap support for E3XCK4 as seed ortholog is 100%.
Bootstrap support for L0PFJ7 as seed ortholog is 100%.

Group of orthologs #632. Best score 153 bits
Score difference with first non-orthologous sequence - A.darlingi:48 P.jiroveci:65

E3XCU4              	100.00%		L0PDB8              	100.00%
E3XBR3              	8.65%		
Bootstrap support for E3XCU4 as seed ortholog is 95%.
Bootstrap support for L0PDB8 as seed ortholog is 98%.

Group of orthologs #633. Best score 153 bits
Score difference with first non-orthologous sequence - A.darlingi:153 P.jiroveci:153

E3WTH0              	100.00%		L0P965              	100.00%
Bootstrap support for E3WTH0 as seed ortholog is 100%.
Bootstrap support for L0P965 as seed ortholog is 100%.

Group of orthologs #634. Best score 153 bits
Score difference with first non-orthologous sequence - A.darlingi:153 P.jiroveci:153

E3WMS4              	100.00%		L0PF97              	100.00%
Bootstrap support for E3WMS4 as seed ortholog is 100%.
Bootstrap support for L0PF97 as seed ortholog is 100%.

Group of orthologs #635. Best score 152 bits
Score difference with first non-orthologous sequence - A.darlingi:152 P.jiroveci:152

E3WYM3              	100.00%		L0P9A8              	100.00%
                    	       		L0PHB9              	100.00%
Bootstrap support for E3WYM3 as seed ortholog is 100%.
Bootstrap support for L0P9A8 as seed ortholog is 100%.
Bootstrap support for L0PHB9 as seed ortholog is 100%.

Group of orthologs #636. Best score 152 bits
Score difference with first non-orthologous sequence - A.darlingi:104 P.jiroveci:152

E3WYH2              	100.00%		L0P7Y5              	100.00%
Bootstrap support for E3WYH2 as seed ortholog is 98%.
Bootstrap support for L0P7Y5 as seed ortholog is 100%.

Group of orthologs #637. Best score 151 bits
Score difference with first non-orthologous sequence - A.darlingi:68 P.jiroveci:98

E3X6K8              	100.00%		L0P9Z5              	100.00%
Bootstrap support for E3X6K8 as seed ortholog is 92%.
Bootstrap support for L0P9Z5 as seed ortholog is 97%.

Group of orthologs #638. Best score 151 bits
Score difference with first non-orthologous sequence - A.darlingi:151 P.jiroveci:151

E3XDE8              	100.00%		L0P8P5              	100.00%
Bootstrap support for E3XDE8 as seed ortholog is 100%.
Bootstrap support for L0P8P5 as seed ortholog is 100%.

Group of orthologs #639. Best score 151 bits
Score difference with first non-orthologous sequence - A.darlingi:151 P.jiroveci:151

E3XF99              	100.00%		L0PFY6              	100.00%
Bootstrap support for E3XF99 as seed ortholog is 100%.
Bootstrap support for L0PFY6 as seed ortholog is 100%.

Group of orthologs #640. Best score 150 bits
Score difference with first non-orthologous sequence - A.darlingi:150 P.jiroveci:150

E3WXF5              	100.00%		L0PE97              	100.00%
Bootstrap support for E3WXF5 as seed ortholog is 100%.
Bootstrap support for L0PE97 as seed ortholog is 100%.

Group of orthologs #641. Best score 149 bits
Score difference with first non-orthologous sequence - A.darlingi:149 P.jiroveci:149

E3WJF7              	100.00%		L0PFD7              	100.00%
Bootstrap support for E3WJF7 as seed ortholog is 100%.
Bootstrap support for L0PFD7 as seed ortholog is 100%.

Group of orthologs #642. Best score 149 bits
Score difference with first non-orthologous sequence - A.darlingi:149 P.jiroveci:149

E3WYW5              	100.00%		L0P6S2              	100.00%
Bootstrap support for E3WYW5 as seed ortholog is 100%.
Bootstrap support for L0P6S2 as seed ortholog is 100%.

Group of orthologs #643. Best score 149 bits
Score difference with first non-orthologous sequence - A.darlingi:76 P.jiroveci:90

E3XG47              	100.00%		L0P7L3              	100.00%
Bootstrap support for E3XG47 as seed ortholog is 96%.
Bootstrap support for L0P7L3 as seed ortholog is 98%.

Group of orthologs #644. Best score 148 bits
Score difference with first non-orthologous sequence - A.darlingi:148 P.jiroveci:148

E3WQL3              	100.00%		L0PEB9              	100.00%
                    	       		L0PA79              	59.68%
Bootstrap support for E3WQL3 as seed ortholog is 100%.
Bootstrap support for L0PEB9 as seed ortholog is 100%.

Group of orthologs #645. Best score 148 bits
Score difference with first non-orthologous sequence - A.darlingi:148 P.jiroveci:148

E3WXG1              	100.00%		L0PEL6              	100.00%
Bootstrap support for E3WXG1 as seed ortholog is 100%.
Bootstrap support for L0PEL6 as seed ortholog is 100%.

Group of orthologs #646. Best score 148 bits
Score difference with first non-orthologous sequence - A.darlingi:148 P.jiroveci:148

E3X146              	100.00%		L0PDY2              	100.00%
Bootstrap support for E3X146 as seed ortholog is 100%.
Bootstrap support for L0PDY2 as seed ortholog is 100%.

Group of orthologs #647. Best score 148 bits
Score difference with first non-orthologous sequence - A.darlingi:148 P.jiroveci:148

E3XCA5              	100.00%		L0PAD9              	100.00%
Bootstrap support for E3XCA5 as seed ortholog is 100%.
Bootstrap support for L0PAD9 as seed ortholog is 100%.

Group of orthologs #648. Best score 147 bits
Score difference with first non-orthologous sequence - A.darlingi:147 P.jiroveci:147

E3WLI5              	100.00%		L0PBN7              	100.00%
Bootstrap support for E3WLI5 as seed ortholog is 100%.
Bootstrap support for L0PBN7 as seed ortholog is 100%.

Group of orthologs #649. Best score 147 bits
Score difference with first non-orthologous sequence - A.darlingi:147 P.jiroveci:147

E3WJZ3              	100.00%		L0PFJ8              	100.00%
Bootstrap support for E3WJZ3 as seed ortholog is 100%.
Bootstrap support for L0PFJ8 as seed ortholog is 100%.

Group of orthologs #650. Best score 147 bits
Score difference with first non-orthologous sequence - A.darlingi:147 P.jiroveci:147

E3X1G5              	100.00%		L0PA27              	100.00%
Bootstrap support for E3X1G5 as seed ortholog is 100%.
Bootstrap support for L0PA27 as seed ortholog is 100%.

Group of orthologs #651. Best score 147 bits
Score difference with first non-orthologous sequence - A.darlingi:147 P.jiroveci:147

E3X5N5              	100.00%		L0P9I2              	100.00%
Bootstrap support for E3X5N5 as seed ortholog is 100%.
Bootstrap support for L0P9I2 as seed ortholog is 100%.

Group of orthologs #652. Best score 146 bits
Score difference with first non-orthologous sequence - A.darlingi:146 P.jiroveci:146

B6DDT9              	100.00%		L0P8H6              	100.00%
Bootstrap support for B6DDT9 as seed ortholog is 100%.
Bootstrap support for L0P8H6 as seed ortholog is 100%.

Group of orthologs #653. Best score 146 bits
Score difference with first non-orthologous sequence - A.darlingi:146 P.jiroveci:146

E3WTU6              	100.00%		L0PE03              	100.00%
Bootstrap support for E3WTU6 as seed ortholog is 100%.
Bootstrap support for L0PE03 as seed ortholog is 100%.

Group of orthologs #654. Best score 146 bits
Score difference with first non-orthologous sequence - A.darlingi:146 P.jiroveci:146

E3X9T8              	100.00%		L0PC18              	100.00%
Bootstrap support for E3X9T8 as seed ortholog is 100%.
Bootstrap support for L0PC18 as seed ortholog is 100%.

Group of orthologs #655. Best score 146 bits
Score difference with first non-orthologous sequence - A.darlingi:146 P.jiroveci:146

E3XCZ8              	100.00%		L0PC68              	100.00%
Bootstrap support for E3XCZ8 as seed ortholog is 100%.
Bootstrap support for L0PC68 as seed ortholog is 100%.

Group of orthologs #656. Best score 145 bits
Score difference with first non-orthologous sequence - A.darlingi:145 P.jiroveci:145

E3WKK2              	100.00%		L0PD70              	100.00%
                    	       		L0P9Q7              	82.31%
Bootstrap support for E3WKK2 as seed ortholog is 100%.
Bootstrap support for L0PD70 as seed ortholog is 100%.

Group of orthologs #657. Best score 145 bits
Score difference with first non-orthologous sequence - A.darlingi:145 P.jiroveci:145

E3X1G2              	100.00%		L0PC96              	100.00%
Bootstrap support for E3X1G2 as seed ortholog is 100%.
Bootstrap support for L0PC96 as seed ortholog is 100%.

Group of orthologs #658. Best score 145 bits
Score difference with first non-orthologous sequence - A.darlingi:145 P.jiroveci:145

E3X812              	100.00%		L0PDN5              	100.00%
Bootstrap support for E3X812 as seed ortholog is 100%.
Bootstrap support for L0PDN5 as seed ortholog is 100%.

Group of orthologs #659. Best score 144 bits
Score difference with first non-orthologous sequence - A.darlingi:60 P.jiroveci:68

E3WUA4              	100.00%		L0PE79              	100.00%
E3WZ14              	100.00%		
E3XA60              	15.02%		
E3XBP6              	12.45%		
Bootstrap support for E3WUA4 as seed ortholog is 96%.
Bootstrap support for E3WZ14 as seed ortholog is 97%.
Bootstrap support for L0PE79 as seed ortholog is 98%.

Group of orthologs #660. Best score 144 bits
Score difference with first non-orthologous sequence - A.darlingi:144 P.jiroveci:12

E3WSZ6              	100.00%		L0PGP9              	100.00%
Bootstrap support for E3WSZ6 as seed ortholog is 100%.
Bootstrap support for L0PGP9 as seed ortholog is 64%.
Alternative seed ortholog is L0PA33 (12 bits away from this cluster)

Group of orthologs #661. Best score 144 bits
Score difference with first non-orthologous sequence - A.darlingi:102 P.jiroveci:144

E3X1H6              	100.00%		L0PAR2              	100.00%
Bootstrap support for E3X1H6 as seed ortholog is 99%.
Bootstrap support for L0PAR2 as seed ortholog is 100%.

Group of orthologs #662. Best score 144 bits
Score difference with first non-orthologous sequence - A.darlingi:53 P.jiroveci:144

E3X8J8              	100.00%		L0P7E9              	100.00%
Bootstrap support for E3X8J8 as seed ortholog is 98%.
Bootstrap support for L0P7E9 as seed ortholog is 100%.

Group of orthologs #663. Best score 143 bits
Score difference with first non-orthologous sequence - A.darlingi:143 P.jiroveci:143

E3WRA5              	100.00%		L0PD37              	100.00%
Bootstrap support for E3WRA5 as seed ortholog is 100%.
Bootstrap support for L0PD37 as seed ortholog is 100%.

Group of orthologs #664. Best score 143 bits
Score difference with first non-orthologous sequence - A.darlingi:55 P.jiroveci:143

E3WWL1              	100.00%		L0PF33              	100.00%
Bootstrap support for E3WWL1 as seed ortholog is 99%.
Bootstrap support for L0PF33 as seed ortholog is 100%.

Group of orthologs #665. Best score 143 bits
Score difference with first non-orthologous sequence - A.darlingi:25 P.jiroveci:143

E3WYH6              	100.00%		L0PD97              	100.00%
Bootstrap support for E3WYH6 as seed ortholog is 83%.
Bootstrap support for L0PD97 as seed ortholog is 100%.

Group of orthologs #666. Best score 143 bits
Score difference with first non-orthologous sequence - A.darlingi:143 P.jiroveci:143

E3WWS2              	100.00%		L0PHA7              	100.00%
Bootstrap support for E3WWS2 as seed ortholog is 100%.
Bootstrap support for L0PHA7 as seed ortholog is 100%.

Group of orthologs #667. Best score 143 bits
Score difference with first non-orthologous sequence - A.darlingi:8 P.jiroveci:98

E3X1C1              	100.00%		L0PFZ5              	100.00%
Bootstrap support for E3X1C1 as seed ortholog is 59%.
Alternative seed ortholog is E3WMF3 (8 bits away from this cluster)
Bootstrap support for L0PFZ5 as seed ortholog is 99%.

Group of orthologs #668. Best score 143 bits
Score difference with first non-orthologous sequence - A.darlingi:143 P.jiroveci:143

E3XAZ8              	100.00%		L0P9B3              	100.00%
Bootstrap support for E3XAZ8 as seed ortholog is 100%.
Bootstrap support for L0P9B3 as seed ortholog is 100%.

Group of orthologs #669. Best score 143 bits
Score difference with first non-orthologous sequence - A.darlingi:143 P.jiroveci:143

E3X9A9              	100.00%		L0PFH3              	100.00%
Bootstrap support for E3X9A9 as seed ortholog is 100%.
Bootstrap support for L0PFH3 as seed ortholog is 100%.

Group of orthologs #670. Best score 142 bits
Score difference with first non-orthologous sequence - A.darlingi:142 P.jiroveci:142

E3X902              	100.00%		L0PFL0              	100.00%
Bootstrap support for E3X902 as seed ortholog is 100%.
Bootstrap support for L0PFL0 as seed ortholog is 100%.

Group of orthologs #671. Best score 142 bits
Score difference with first non-orthologous sequence - A.darlingi:142 P.jiroveci:142

E3XF95              	100.00%		L0P9D1              	100.00%
Bootstrap support for E3XF95 as seed ortholog is 100%.
Bootstrap support for L0P9D1 as seed ortholog is 100%.

Group of orthologs #672. Best score 142 bits
Score difference with first non-orthologous sequence - A.darlingi:142 P.jiroveci:102

E3XEG1              	100.00%		L0PEN8              	100.00%
Bootstrap support for E3XEG1 as seed ortholog is 100%.
Bootstrap support for L0PEN8 as seed ortholog is 97%.

Group of orthologs #673. Best score 141 bits
Score difference with first non-orthologous sequence - A.darlingi:141 P.jiroveci:141

E3WRP5              	100.00%		L0P8V3              	100.00%
Bootstrap support for E3WRP5 as seed ortholog is 100%.
Bootstrap support for L0P8V3 as seed ortholog is 100%.

Group of orthologs #674. Best score 141 bits
Score difference with first non-orthologous sequence - A.darlingi:141 P.jiroveci:141

E3WTS3              	100.00%		L0PCC8              	100.00%
Bootstrap support for E3WTS3 as seed ortholog is 100%.
Bootstrap support for L0PCC8 as seed ortholog is 100%.

Group of orthologs #675. Best score 141 bits
Score difference with first non-orthologous sequence - A.darlingi:141 P.jiroveci:141

E3X063              	100.00%		L0PCY2              	100.00%
Bootstrap support for E3X063 as seed ortholog is 100%.
Bootstrap support for L0PCY2 as seed ortholog is 100%.

Group of orthologs #676. Best score 141 bits
Score difference with first non-orthologous sequence - A.darlingi:34 P.jiroveci:39

E3X2Z5              	100.00%		L0PIS9              	100.00%
Bootstrap support for E3X2Z5 as seed ortholog is 88%.
Bootstrap support for L0PIS9 as seed ortholog is 96%.

Group of orthologs #677. Best score 140 bits
Score difference with first non-orthologous sequence - A.darlingi:72 P.jiroveci:140

E3X2I8              	100.00%		L0PAG1              	100.00%
E3X2I7              	58.21%		
Bootstrap support for E3X2I8 as seed ortholog is 96%.
Bootstrap support for L0PAG1 as seed ortholog is 100%.

Group of orthologs #678. Best score 140 bits
Score difference with first non-orthologous sequence - A.darlingi:140 P.jiroveci:140

E3WXW4              	100.00%		L0PCU6              	100.00%
Bootstrap support for E3WXW4 as seed ortholog is 100%.
Bootstrap support for L0PCU6 as seed ortholog is 100%.

Group of orthologs #679. Best score 140 bits
Score difference with first non-orthologous sequence - A.darlingi:140 P.jiroveci:140

E3X6A0              	100.00%		L0PIR4              	100.00%
Bootstrap support for E3X6A0 as seed ortholog is 100%.
Bootstrap support for L0PIR4 as seed ortholog is 100%.

Group of orthologs #680. Best score 139 bits
Score difference with first non-orthologous sequence - A.darlingi:139 P.jiroveci:139

E3WMF4              	100.00%		L0PAB8              	100.00%
Bootstrap support for E3WMF4 as seed ortholog is 100%.
Bootstrap support for L0PAB8 as seed ortholog is 100%.

Group of orthologs #681. Best score 139 bits
Score difference with first non-orthologous sequence - A.darlingi:139 P.jiroveci:35

E3WY68              	100.00%		L0PCJ0              	100.00%
Bootstrap support for E3WY68 as seed ortholog is 100%.
Bootstrap support for L0PCJ0 as seed ortholog is 71%.
Alternative seed ortholog is L0PGZ6 (35 bits away from this cluster)

Group of orthologs #682. Best score 139 bits
Score difference with first non-orthologous sequence - A.darlingi:139 P.jiroveci:139

E3X7K9              	100.00%		L0PD14              	100.00%
Bootstrap support for E3X7K9 as seed ortholog is 100%.
Bootstrap support for L0PD14 as seed ortholog is 100%.

Group of orthologs #683. Best score 138 bits
Score difference with first non-orthologous sequence - A.darlingi:138 P.jiroveci:138

E3WLR6              	100.00%		L0PD11              	100.00%
Bootstrap support for E3WLR6 as seed ortholog is 100%.
Bootstrap support for L0PD11 as seed ortholog is 100%.

Group of orthologs #684. Best score 138 bits
Score difference with first non-orthologous sequence - A.darlingi:138 P.jiroveci:138

E3WVK2              	100.00%		L0PG84              	100.00%
Bootstrap support for E3WVK2 as seed ortholog is 100%.
Bootstrap support for L0PG84 as seed ortholog is 100%.

Group of orthologs #685. Best score 137 bits
Score difference with first non-orthologous sequence - A.darlingi:137 P.jiroveci:137

E3WJ87              	100.00%		L0PFH2              	100.00%
E3WWF6              	40.83%		
Bootstrap support for E3WJ87 as seed ortholog is 100%.
Bootstrap support for L0PFH2 as seed ortholog is 100%.

Group of orthologs #686. Best score 137 bits
Score difference with first non-orthologous sequence - A.darlingi:137 P.jiroveci:137

E3WLR0              	100.00%		L0P919              	100.00%
Bootstrap support for E3WLR0 as seed ortholog is 100%.
Bootstrap support for L0P919 as seed ortholog is 100%.

Group of orthologs #687. Best score 137 bits
Score difference with first non-orthologous sequence - A.darlingi:137 P.jiroveci:137

E3WSY0              	100.00%		L0PDI9              	100.00%
Bootstrap support for E3WSY0 as seed ortholog is 100%.
Bootstrap support for L0PDI9 as seed ortholog is 100%.

Group of orthologs #688. Best score 137 bits
Score difference with first non-orthologous sequence - A.darlingi:137 P.jiroveci:137

E3WZB5              	100.00%		L0PBG3              	100.00%
Bootstrap support for E3WZB5 as seed ortholog is 100%.
Bootstrap support for L0PBG3 as seed ortholog is 100%.

Group of orthologs #689. Best score 137 bits
Score difference with first non-orthologous sequence - A.darlingi:137 P.jiroveci:137

E3X5X7              	100.00%		L0P9X0              	100.00%
Bootstrap support for E3X5X7 as seed ortholog is 100%.
Bootstrap support for L0P9X0 as seed ortholog is 100%.

Group of orthologs #690. Best score 136 bits
Score difference with first non-orthologous sequence - A.darlingi:136 P.jiroveci:136

E3WV20              	100.00%		L0P9E5              	100.00%
Bootstrap support for E3WV20 as seed ortholog is 100%.
Bootstrap support for L0P9E5 as seed ortholog is 100%.

Group of orthologs #691. Best score 136 bits
Score difference with first non-orthologous sequence - A.darlingi:32 P.jiroveci:136

E3X1N5              	100.00%		L0P746              	100.00%
Bootstrap support for E3X1N5 as seed ortholog is 79%.
Bootstrap support for L0P746 as seed ortholog is 100%.

Group of orthologs #692. Best score 136 bits
Score difference with first non-orthologous sequence - A.darlingi:136 P.jiroveci:136

E3X453              	100.00%		L0PA22              	100.00%
Bootstrap support for E3X453 as seed ortholog is 100%.
Bootstrap support for L0PA22 as seed ortholog is 100%.

Group of orthologs #693. Best score 136 bits
Score difference with first non-orthologous sequence - A.darlingi:2 P.jiroveci:136

E3XGD8              	100.00%		L0PEX1              	100.00%
Bootstrap support for E3XGD8 as seed ortholog is 51%.
Alternative seed ortholog is E3WZ07 (2 bits away from this cluster)
Bootstrap support for L0PEX1 as seed ortholog is 100%.

Group of orthologs #694. Best score 135 bits
Score difference with first non-orthologous sequence - A.darlingi:135 P.jiroveci:135

E3X7Y6              	100.00%		L0P872              	100.00%
Bootstrap support for E3X7Y6 as seed ortholog is 100%.
Bootstrap support for L0P872 as seed ortholog is 100%.

Group of orthologs #695. Best score 134 bits
Score difference with first non-orthologous sequence - A.darlingi:134 P.jiroveci:134

E3X9M4              	100.00%		L0PEN7              	100.00%
Bootstrap support for E3X9M4 as seed ortholog is 100%.
Bootstrap support for L0PEN7 as seed ortholog is 100%.

Group of orthologs #696. Best score 134 bits
Score difference with first non-orthologous sequence - A.darlingi:48 P.jiroveci:134

E3XFL2              	100.00%		L0PFZ8              	100.00%
Bootstrap support for E3XFL2 as seed ortholog is 98%.
Bootstrap support for L0PFZ8 as seed ortholog is 100%.

Group of orthologs #697. Best score 133 bits
Score difference with first non-orthologous sequence - A.darlingi:133 P.jiroveci:133

E3WKI8              	100.00%		L0PFP1              	100.00%
                    	       		L0PC71              	76.19%
Bootstrap support for E3WKI8 as seed ortholog is 100%.
Bootstrap support for L0PFP1 as seed ortholog is 100%.

Group of orthologs #698. Best score 133 bits
Score difference with first non-orthologous sequence - A.darlingi:133 P.jiroveci:133

E3X0Z8              	100.00%		L0P6Q5              	100.00%
Bootstrap support for E3X0Z8 as seed ortholog is 100%.
Bootstrap support for L0P6Q5 as seed ortholog is 100%.

Group of orthologs #699. Best score 133 bits
Score difference with first non-orthologous sequence - A.darlingi:133 P.jiroveci:133

E3WUY3              	100.00%		L0PFS7              	100.00%
Bootstrap support for E3WUY3 as seed ortholog is 100%.
Bootstrap support for L0PFS7 as seed ortholog is 100%.

Group of orthologs #700. Best score 132 bits
Score difference with first non-orthologous sequence - A.darlingi:132 P.jiroveci:132

E3WX41              	100.00%		L0PD09              	100.00%
E3X207              	20.75%		
E3WRP7              	13.89%		
E3XAH3              	10.05%		
E3XE14              	9.07%		
E3WN67              	8.25%		
Bootstrap support for E3WX41 as seed ortholog is 100%.
Bootstrap support for L0PD09 as seed ortholog is 100%.

Group of orthologs #701. Best score 132 bits
Score difference with first non-orthologous sequence - A.darlingi:132 P.jiroveci:132

E3XG00              	100.00%		L0PAA1              	100.00%
Bootstrap support for E3XG00 as seed ortholog is 100%.
Bootstrap support for L0PAA1 as seed ortholog is 100%.

Group of orthologs #702. Best score 131 bits
Score difference with first non-orthologous sequence - A.darlingi:131 P.jiroveci:131

E3WRX5              	100.00%		L0P9F5              	100.00%
Bootstrap support for E3WRX5 as seed ortholog is 100%.
Bootstrap support for L0P9F5 as seed ortholog is 100%.

Group of orthologs #703. Best score 131 bits
Score difference with first non-orthologous sequence - A.darlingi:36 P.jiroveci:131

E3WR34              	100.00%		L0PGN9              	100.00%
Bootstrap support for E3WR34 as seed ortholog is 83%.
Bootstrap support for L0PGN9 as seed ortholog is 100%.

Group of orthologs #704. Best score 131 bits
Score difference with first non-orthologous sequence - A.darlingi:82 P.jiroveci:131

E3X4W0              	100.00%		L0P9L0              	100.00%
Bootstrap support for E3X4W0 as seed ortholog is 99%.
Bootstrap support for L0P9L0 as seed ortholog is 100%.

Group of orthologs #705. Best score 131 bits
Score difference with first non-orthologous sequence - A.darlingi:131 P.jiroveci:131

E3X7L2              	100.00%		L0PEI9              	100.00%
Bootstrap support for E3X7L2 as seed ortholog is 100%.
Bootstrap support for L0PEI9 as seed ortholog is 100%.

Group of orthologs #706. Best score 130 bits
Score difference with first non-orthologous sequence - A.darlingi:130 P.jiroveci:130

E3XA89              	100.00%		L0P7U6              	100.00%
Bootstrap support for E3XA89 as seed ortholog is 100%.
Bootstrap support for L0P7U6 as seed ortholog is 100%.

Group of orthologs #707. Best score 129 bits
Score difference with first non-orthologous sequence - A.darlingi:129 P.jiroveci:129

E3WQK1              	100.00%		L0PBE8              	100.00%
Bootstrap support for E3WQK1 as seed ortholog is 100%.
Bootstrap support for L0PBE8 as seed ortholog is 100%.

Group of orthologs #708. Best score 129 bits
Score difference with first non-orthologous sequence - A.darlingi:129 P.jiroveci:129

E3WNL3              	100.00%		L0PGB3              	100.00%
Bootstrap support for E3WNL3 as seed ortholog is 100%.
Bootstrap support for L0PGB3 as seed ortholog is 100%.

Group of orthologs #709. Best score 129 bits
Score difference with first non-orthologous sequence - A.darlingi:129 P.jiroveci:129

E3WWS8              	100.00%		L0PF38              	100.00%
Bootstrap support for E3WWS8 as seed ortholog is 100%.
Bootstrap support for L0PF38 as seed ortholog is 100%.

Group of orthologs #710. Best score 129 bits
Score difference with first non-orthologous sequence - A.darlingi:129 P.jiroveci:36

E3X2A5              	100.00%		L0PGL3              	100.00%
Bootstrap support for E3X2A5 as seed ortholog is 100%.
Bootstrap support for L0PGL3 as seed ortholog is 52%.
Alternative seed ortholog is L0PAL8 (36 bits away from this cluster)

Group of orthologs #711. Best score 129 bits
Score difference with first non-orthologous sequence - A.darlingi:129 P.jiroveci:129

E3XAV2              	100.00%		L0P9Q6              	100.00%
Bootstrap support for E3XAV2 as seed ortholog is 100%.
Bootstrap support for L0P9Q6 as seed ortholog is 100%.

Group of orthologs #712. Best score 129 bits
Score difference with first non-orthologous sequence - A.darlingi:129 P.jiroveci:129

E3XGC2              	100.00%		L0PCC0              	100.00%
Bootstrap support for E3XGC2 as seed ortholog is 100%.
Bootstrap support for L0PCC0 as seed ortholog is 100%.

Group of orthologs #713. Best score 128 bits
Score difference with first non-orthologous sequence - A.darlingi:55 P.jiroveci:128

E3WY91              	100.00%		L0PE18              	100.00%
E3WY90              	26.87%		
E3WSP9              	20.77%		
E3WY89              	20.18%		
E3WY93              	18.01%		
E3X243              	17.22%		
E3X374              	14.96%		
E3WJH1              	11.02%		
E3X185              	7.48%		
E3XF35              	7.28%		
E3WYC2              	7.19%		
E3X186              	6.69%		
E3WY92              	6.00%		
E3WUA8              	5.61%		
Bootstrap support for E3WY91 as seed ortholog is 89%.
Bootstrap support for L0PE18 as seed ortholog is 100%.

Group of orthologs #714. Best score 128 bits
Score difference with first non-orthologous sequence - A.darlingi:68 P.jiroveci:64

E3WYC0              	100.00%		L0P8G0              	100.00%
Bootstrap support for E3WYC0 as seed ortholog is 99%.
Bootstrap support for L0P8G0 as seed ortholog is 99%.

Group of orthologs #715. Best score 128 bits
Score difference with first non-orthologous sequence - A.darlingi:128 P.jiroveci:128

E3WWG5              	100.00%		L0PG04              	100.00%
Bootstrap support for E3WWG5 as seed ortholog is 100%.
Bootstrap support for L0PG04 as seed ortholog is 100%.

Group of orthologs #716. Best score 128 bits
Score difference with first non-orthologous sequence - A.darlingi:128 P.jiroveci:128

E3XA91              	100.00%		L0PCP0              	100.00%
Bootstrap support for E3XA91 as seed ortholog is 100%.
Bootstrap support for L0PCP0 as seed ortholog is 100%.

Group of orthologs #717. Best score 127 bits
Score difference with first non-orthologous sequence - A.darlingi:127 P.jiroveci:127

E3WK61              	100.00%		L0PAW7              	100.00%
Bootstrap support for E3WK61 as seed ortholog is 100%.
Bootstrap support for L0PAW7 as seed ortholog is 100%.

Group of orthologs #718. Best score 127 bits
Score difference with first non-orthologous sequence - A.darlingi:127 P.jiroveci:127

E3WUZ4              	100.00%		L0PBD4              	100.00%
Bootstrap support for E3WUZ4 as seed ortholog is 100%.
Bootstrap support for L0PBD4 as seed ortholog is 100%.

Group of orthologs #719. Best score 127 bits
Score difference with first non-orthologous sequence - A.darlingi:64 P.jiroveci:127

E3WVZ8              	100.00%		L0PBI4              	100.00%
Bootstrap support for E3WVZ8 as seed ortholog is 98%.
Bootstrap support for L0PBI4 as seed ortholog is 100%.

Group of orthologs #720. Best score 126 bits
Score difference with first non-orthologous sequence - A.darlingi:126 P.jiroveci:126

E3X7C4              	100.00%		L0PBH3              	100.00%
Bootstrap support for E3X7C4 as seed ortholog is 100%.
Bootstrap support for L0PBH3 as seed ortholog is 100%.

Group of orthologs #721. Best score 126 bits
Score difference with first non-orthologous sequence - A.darlingi:40 P.jiroveci:60

E3X5F3              	100.00%		L0PFN2              	100.00%
Bootstrap support for E3X5F3 as seed ortholog is 99%.
Bootstrap support for L0PFN2 as seed ortholog is 99%.

Group of orthologs #722. Best score 125 bits
Score difference with first non-orthologous sequence - A.darlingi:125 P.jiroveci:125

E3WMV8              	100.00%		L0PD00              	100.00%
Bootstrap support for E3WMV8 as seed ortholog is 100%.
Bootstrap support for L0PD00 as seed ortholog is 100%.

Group of orthologs #723. Best score 125 bits
Score difference with first non-orthologous sequence - A.darlingi:64 P.jiroveci:125

E3WNV2              	100.00%		L0PF58              	100.00%
Bootstrap support for E3WNV2 as seed ortholog is 98%.
Bootstrap support for L0PF58 as seed ortholog is 100%.

Group of orthologs #724. Best score 124 bits
Score difference with first non-orthologous sequence - A.darlingi:124 P.jiroveci:124

E3WT67              	100.00%		L0PF42              	100.00%
                    	       		L0PD01              	98.56%
Bootstrap support for E3WT67 as seed ortholog is 100%.
Bootstrap support for L0PF42 as seed ortholog is 100%.

Group of orthologs #725. Best score 124 bits
Score difference with first non-orthologous sequence - A.darlingi:124 P.jiroveci:124

E3X1V2              	100.00%		L0PCN2              	100.00%
Bootstrap support for E3X1V2 as seed ortholog is 100%.
Bootstrap support for L0PCN2 as seed ortholog is 100%.

Group of orthologs #726. Best score 123 bits
Score difference with first non-orthologous sequence - A.darlingi:76 P.jiroveci:123

E3WU44              	100.00%		L0PG59              	100.00%
Bootstrap support for E3WU44 as seed ortholog is 99%.
Bootstrap support for L0PG59 as seed ortholog is 100%.

Group of orthologs #727. Best score 123 bits
Score difference with first non-orthologous sequence - A.darlingi:123 P.jiroveci:123

E3X0Q0              	100.00%		L0PEV4              	100.00%
Bootstrap support for E3X0Q0 as seed ortholog is 100%.
Bootstrap support for L0PEV4 as seed ortholog is 100%.

Group of orthologs #728. Best score 123 bits
Score difference with first non-orthologous sequence - A.darlingi:123 P.jiroveci:123

E3X2C7              	100.00%		L0PDN3              	100.00%
Bootstrap support for E3X2C7 as seed ortholog is 100%.
Bootstrap support for L0PDN3 as seed ortholog is 100%.

Group of orthologs #729. Best score 122 bits
Score difference with first non-orthologous sequence - A.darlingi:122 P.jiroveci:122

E3X4X6              	100.00%		L0PFM7              	100.00%
Bootstrap support for E3X4X6 as seed ortholog is 100%.
Bootstrap support for L0PFM7 as seed ortholog is 100%.

Group of orthologs #730. Best score 121 bits
Score difference with first non-orthologous sequence - A.darlingi:121 P.jiroveci:121

E3WPY4              	100.00%		L0PCT7              	100.00%
Bootstrap support for E3WPY4 as seed ortholog is 100%.
Bootstrap support for L0PCT7 as seed ortholog is 100%.

Group of orthologs #731. Best score 121 bits
Score difference with first non-orthologous sequence - A.darlingi:121 P.jiroveci:121

E3WX91              	100.00%		L0P7C7              	100.00%
Bootstrap support for E3WX91 as seed ortholog is 100%.
Bootstrap support for L0P7C7 as seed ortholog is 100%.

Group of orthologs #732. Best score 121 bits
Score difference with first non-orthologous sequence - A.darlingi:121 P.jiroveci:121

E3X023              	100.00%		L0PAN5              	100.00%
Bootstrap support for E3X023 as seed ortholog is 100%.
Bootstrap support for L0PAN5 as seed ortholog is 100%.

Group of orthologs #733. Best score 121 bits
Score difference with first non-orthologous sequence - A.darlingi:121 P.jiroveci:121

E3X193              	100.00%		L0PDA4              	100.00%
Bootstrap support for E3X193 as seed ortholog is 100%.
Bootstrap support for L0PDA4 as seed ortholog is 100%.

Group of orthologs #734. Best score 120 bits
Score difference with first non-orthologous sequence - A.darlingi:65 P.jiroveci:120

E3WJK9              	100.00%		L0PEN4              	100.00%
E3WLD2              	14.02%		
E3WJL1              	13.92%		
E3WXZ5              	12.41%		
E3WWD7              	11.87%		
E3WMA3              	11.65%		
E3WWD8              	10.90%		
E3X9A8              	9.71%		
Bootstrap support for E3WJK9 as seed ortholog is 91%.
Bootstrap support for L0PEN4 as seed ortholog is 100%.

Group of orthologs #735. Best score 120 bits
Score difference with first non-orthologous sequence - A.darlingi:120 P.jiroveci:76

E3WJ73              	100.00%		L0PEJ9              	100.00%
Bootstrap support for E3WJ73 as seed ortholog is 100%.
Bootstrap support for L0PEJ9 as seed ortholog is 95%.

Group of orthologs #736. Best score 120 bits
Score difference with first non-orthologous sequence - A.darlingi:120 P.jiroveci:120

E3WRV3              	100.00%		L0PCB4              	100.00%
Bootstrap support for E3WRV3 as seed ortholog is 100%.
Bootstrap support for L0PCB4 as seed ortholog is 100%.

Group of orthologs #737. Best score 120 bits
Score difference with first non-orthologous sequence - A.darlingi:120 P.jiroveci:120

E3WUD3              	100.00%		L0PCJ8              	100.00%
Bootstrap support for E3WUD3 as seed ortholog is 100%.
Bootstrap support for L0PCJ8 as seed ortholog is 100%.

Group of orthologs #738. Best score 120 bits
Score difference with first non-orthologous sequence - A.darlingi:1 P.jiroveci:120

E3WXG8              	100.00%		L0PC81              	100.00%
Bootstrap support for E3WXG8 as seed ortholog is 54%.
Alternative seed ortholog is E3X599 (1 bits away from this cluster)
Bootstrap support for L0PC81 as seed ortholog is 100%.

Group of orthologs #739. Best score 120 bits
Score difference with first non-orthologous sequence - A.darlingi:120 P.jiroveci:120

E3WZU4              	100.00%		L0PA67              	100.00%
Bootstrap support for E3WZU4 as seed ortholog is 100%.
Bootstrap support for L0PA67 as seed ortholog is 100%.

Group of orthologs #740. Best score 119 bits
Score difference with first non-orthologous sequence - A.darlingi:119 P.jiroveci:119

E3WVX6              	100.00%		L0P9Y2              	100.00%
Bootstrap support for E3WVX6 as seed ortholog is 100%.
Bootstrap support for L0P9Y2 as seed ortholog is 100%.

Group of orthologs #741. Best score 118 bits
Score difference with first non-orthologous sequence - A.darlingi:118 P.jiroveci:118

E3X0J5              	100.00%		L0P9U0              	100.00%
Bootstrap support for E3X0J5 as seed ortholog is 100%.
Bootstrap support for L0P9U0 as seed ortholog is 100%.

Group of orthologs #742. Best score 118 bits
Score difference with first non-orthologous sequence - A.darlingi:118 P.jiroveci:118

E3XE51              	100.00%		L0PCZ5              	100.00%
Bootstrap support for E3XE51 as seed ortholog is 100%.
Bootstrap support for L0PCZ5 as seed ortholog is 100%.

Group of orthologs #743. Best score 117 bits
Score difference with first non-orthologous sequence - A.darlingi:117 P.jiroveci:117

E3WJY1              	100.00%		L0P7T7              	100.00%
Bootstrap support for E3WJY1 as seed ortholog is 100%.
Bootstrap support for L0P7T7 as seed ortholog is 100%.

Group of orthologs #744. Best score 117 bits
Score difference with first non-orthologous sequence - A.darlingi:117 P.jiroveci:117

E3X9P3              	100.00%		L0PFG0              	100.00%
Bootstrap support for E3X9P3 as seed ortholog is 100%.
Bootstrap support for L0PFG0 as seed ortholog is 100%.

Group of orthologs #745. Best score 117 bits
Score difference with first non-orthologous sequence - A.darlingi:117 P.jiroveci:117

E3XC58              	100.00%		L0PCZ4              	100.00%
Bootstrap support for E3XC58 as seed ortholog is 100%.
Bootstrap support for L0PCZ4 as seed ortholog is 100%.

Group of orthologs #746. Best score 116 bits
Score difference with first non-orthologous sequence - A.darlingi:116 P.jiroveci:40

E3WPT9              	100.00%		L0PFG2              	100.00%
Bootstrap support for E3WPT9 as seed ortholog is 100%.
Bootstrap support for L0PFG2 as seed ortholog is 91%.

Group of orthologs #747. Best score 116 bits
Score difference with first non-orthologous sequence - A.darlingi:116 P.jiroveci:116

E3WVW3              	100.00%		L0PB27              	100.00%
Bootstrap support for E3WVW3 as seed ortholog is 100%.
Bootstrap support for L0PB27 as seed ortholog is 100%.

Group of orthologs #748. Best score 116 bits
Score difference with first non-orthologous sequence - A.darlingi:116 P.jiroveci:63

E3XEA4              	100.00%		L0PD77              	100.00%
Bootstrap support for E3XEA4 as seed ortholog is 100%.
Bootstrap support for L0PD77 as seed ortholog is 97%.

Group of orthologs #749. Best score 115 bits
Score difference with first non-orthologous sequence - A.darlingi:57 P.jiroveci:66

E3X5H6              	100.00%		L0P8R0              	100.00%
                    	       		L0P8P3              	87.50%
Bootstrap support for E3X5H6 as seed ortholog is 99%.
Bootstrap support for L0P8R0 as seed ortholog is 99%.

Group of orthologs #750. Best score 115 bits
Score difference with first non-orthologous sequence - A.darlingi:115 P.jiroveci:115

E3XAL4              	100.00%		L0PA35              	100.00%
E3XAL6              	18.81%		
Bootstrap support for E3XAL4 as seed ortholog is 100%.
Bootstrap support for L0PA35 as seed ortholog is 100%.

Group of orthologs #751. Best score 114 bits
Score difference with first non-orthologous sequence - A.darlingi:114 P.jiroveci:114

E3X0K2              	100.00%		L0P7Q7              	100.00%
                    	       		L0PGL4              	94.71%
Bootstrap support for E3X0K2 as seed ortholog is 100%.
Bootstrap support for L0P7Q7 as seed ortholog is 100%.

Group of orthologs #752. Best score 114 bits
Score difference with first non-orthologous sequence - A.darlingi:114 P.jiroveci:114

B6DDU4              	100.00%		L0PBR1              	100.00%
Bootstrap support for B6DDU4 as seed ortholog is 100%.
Bootstrap support for L0PBR1 as seed ortholog is 100%.

Group of orthologs #753. Best score 114 bits
Score difference with first non-orthologous sequence - A.darlingi:114 P.jiroveci:114

E3WTS7              	100.00%		L0P990              	100.00%
Bootstrap support for E3WTS7 as seed ortholog is 100%.
Bootstrap support for L0P990 as seed ortholog is 100%.

Group of orthologs #754. Best score 114 bits
Score difference with first non-orthologous sequence - A.darlingi:114 P.jiroveci:114

E3WSH2              	100.00%		L0PDX0              	100.00%
Bootstrap support for E3WSH2 as seed ortholog is 100%.
Bootstrap support for L0PDX0 as seed ortholog is 100%.

Group of orthologs #755. Best score 114 bits
Score difference with first non-orthologous sequence - A.darlingi:114 P.jiroveci:114

E3XEM6              	100.00%		L0PA97              	100.00%
Bootstrap support for E3XEM6 as seed ortholog is 100%.
Bootstrap support for L0PA97 as seed ortholog is 100%.

Group of orthologs #756. Best score 113 bits
Score difference with first non-orthologous sequence - A.darlingi:113 P.jiroveci:113

E3XFX5              	100.00%		L0PCX3              	100.00%
E3X2L1              	18.32%		
Bootstrap support for E3XFX5 as seed ortholog is 100%.
Bootstrap support for L0PCX3 as seed ortholog is 100%.

Group of orthologs #757. Best score 113 bits
Score difference with first non-orthologous sequence - A.darlingi:113 P.jiroveci:113

E3WJ55              	100.00%		L0P7W5              	100.00%
Bootstrap support for E3WJ55 as seed ortholog is 100%.
Bootstrap support for L0P7W5 as seed ortholog is 100%.

Group of orthologs #758. Best score 113 bits
Score difference with first non-orthologous sequence - A.darlingi:113 P.jiroveci:113

E3WPY8              	100.00%		L0PD60              	100.00%
Bootstrap support for E3WPY8 as seed ortholog is 100%.
Bootstrap support for L0PD60 as seed ortholog is 100%.

Group of orthologs #759. Best score 113 bits
Score difference with first non-orthologous sequence - A.darlingi:113 P.jiroveci:113

E3WW74              	100.00%		L0P8X1              	100.00%
Bootstrap support for E3WW74 as seed ortholog is 100%.
Bootstrap support for L0P8X1 as seed ortholog is 100%.

Group of orthologs #760. Best score 113 bits
Score difference with first non-orthologous sequence - A.darlingi:113 P.jiroveci:113

E3X239              	100.00%		L0P935              	100.00%
Bootstrap support for E3X239 as seed ortholog is 100%.
Bootstrap support for L0P935 as seed ortholog is 100%.

Group of orthologs #761. Best score 113 bits
Score difference with first non-orthologous sequence - A.darlingi:113 P.jiroveci:113

E3X5A8              	100.00%		L0P8K4              	100.00%
Bootstrap support for E3X5A8 as seed ortholog is 100%.
Bootstrap support for L0P8K4 as seed ortholog is 100%.

Group of orthologs #762. Best score 113 bits
Score difference with first non-orthologous sequence - A.darlingi:113 P.jiroveci:113

E3WZG7              	100.00%		L0PGJ3              	100.00%
Bootstrap support for E3WZG7 as seed ortholog is 100%.
Bootstrap support for L0PGJ3 as seed ortholog is 100%.

Group of orthologs #763. Best score 113 bits
Score difference with first non-orthologous sequence - A.darlingi:113 P.jiroveci:113

E3X291              	100.00%		L0PE43              	100.00%
Bootstrap support for E3X291 as seed ortholog is 100%.
Bootstrap support for L0PE43 as seed ortholog is 100%.

Group of orthologs #764. Best score 113 bits
Score difference with first non-orthologous sequence - A.darlingi:64 P.jiroveci:113

E3XAY3              	100.00%		L0PAB2              	100.00%
Bootstrap support for E3XAY3 as seed ortholog is 97%.
Bootstrap support for L0PAB2 as seed ortholog is 100%.

Group of orthologs #765. Best score 112 bits
Score difference with first non-orthologous sequence - A.darlingi:112 P.jiroveci:112

E3WVE8              	100.00%		L0P968              	100.00%
Bootstrap support for E3WVE8 as seed ortholog is 100%.
Bootstrap support for L0P968 as seed ortholog is 100%.

Group of orthologs #766. Best score 112 bits
Score difference with first non-orthologous sequence - A.darlingi:112 P.jiroveci:112

E3X8K1              	100.00%		L0P8D9              	100.00%
Bootstrap support for E3X8K1 as seed ortholog is 100%.
Bootstrap support for L0P8D9 as seed ortholog is 100%.

Group of orthologs #767. Best score 112 bits
Score difference with first non-orthologous sequence - A.darlingi:112 P.jiroveci:112

E3X5U6              	100.00%		L0PD19              	100.00%
Bootstrap support for E3X5U6 as seed ortholog is 100%.
Bootstrap support for L0PD19 as seed ortholog is 100%.

Group of orthologs #768. Best score 112 bits
Score difference with first non-orthologous sequence - A.darlingi:112 P.jiroveci:112

E3X4I8              	100.00%		L0PEU7              	100.00%
Bootstrap support for E3X4I8 as seed ortholog is 100%.
Bootstrap support for L0PEU7 as seed ortholog is 100%.

Group of orthologs #769. Best score 112 bits
Score difference with first non-orthologous sequence - A.darlingi:112 P.jiroveci:112

E3XDF8              	100.00%		L0P910              	100.00%
Bootstrap support for E3XDF8 as seed ortholog is 100%.
Bootstrap support for L0P910 as seed ortholog is 100%.

Group of orthologs #770. Best score 111 bits
Score difference with first non-orthologous sequence - A.darlingi:46 P.jiroveci:111

E3WLE8              	100.00%		L0PBD5              	100.00%
Bootstrap support for E3WLE8 as seed ortholog is 86%.
Bootstrap support for L0PBD5 as seed ortholog is 100%.

Group of orthologs #771. Best score 111 bits
Score difference with first non-orthologous sequence - A.darlingi:111 P.jiroveci:111

E3X5D6              	100.00%		L0PFD0              	100.00%
Bootstrap support for E3X5D6 as seed ortholog is 100%.
Bootstrap support for L0PFD0 as seed ortholog is 100%.

Group of orthologs #772. Best score 110 bits
Score difference with first non-orthologous sequence - A.darlingi:19 P.jiroveci:110

E3XCL2              	100.00%		L0PBS7              	100.00%
E3XC69              	10.28%		
E3WL47              	6.70%		
Bootstrap support for E3XCL2 as seed ortholog is 60%.
Alternative seed ortholog is E3WQX0 (19 bits away from this cluster)
Bootstrap support for L0PBS7 as seed ortholog is 100%.

Group of orthologs #773. Best score 110 bits
Score difference with first non-orthologous sequence - A.darlingi:110 P.jiroveci:110

E3X5B1              	100.00%		L0P997              	100.00%
Bootstrap support for E3X5B1 as seed ortholog is 100%.
Bootstrap support for L0P997 as seed ortholog is 100%.

Group of orthologs #774. Best score 109 bits
Score difference with first non-orthologous sequence - A.darlingi:109 P.jiroveci:109

E3WKA0              	100.00%		L0PB53              	100.00%
Bootstrap support for E3WKA0 as seed ortholog is 100%.
Bootstrap support for L0PB53 as seed ortholog is 100%.

Group of orthologs #775. Best score 109 bits
Score difference with first non-orthologous sequence - A.darlingi:109 P.jiroveci:109

E3WPE4              	100.00%		L0PAY0              	100.00%
Bootstrap support for E3WPE4 as seed ortholog is 100%.
Bootstrap support for L0PAY0 as seed ortholog is 100%.

Group of orthologs #776. Best score 109 bits
Score difference with first non-orthologous sequence - A.darlingi:109 P.jiroveci:109

E3X9S5              	100.00%		L0PEV6              	100.00%
Bootstrap support for E3X9S5 as seed ortholog is 100%.
Bootstrap support for L0PEV6 as seed ortholog is 100%.

Group of orthologs #777. Best score 109 bits
Score difference with first non-orthologous sequence - A.darlingi:109 P.jiroveci:109

E3XFF0              	100.00%		L0PD86              	100.00%
Bootstrap support for E3XFF0 as seed ortholog is 100%.
Bootstrap support for L0PD86 as seed ortholog is 100%.

Group of orthologs #778. Best score 109 bits
Score difference with first non-orthologous sequence - A.darlingi:109 P.jiroveci:109

E3XG75              	100.00%		L0PH23              	100.00%
Bootstrap support for E3XG75 as seed ortholog is 100%.
Bootstrap support for L0PH23 as seed ortholog is 100%.

Group of orthologs #779. Best score 108 bits
Score difference with first non-orthologous sequence - A.darlingi:108 P.jiroveci:108

E3X9R1              	100.00%		L0PE21              	100.00%
E3X6I3              	29.93%		
E3X406              	27.38%		
E3X6I1              	25.91%		
E3X6I2              	25.77%		
E3WTV4              	24.97%		
Bootstrap support for E3X9R1 as seed ortholog is 100%.
Bootstrap support for L0PE21 as seed ortholog is 100%.

Group of orthologs #780. Best score 108 bits
Score difference with first non-orthologous sequence - A.darlingi:108 P.jiroveci:108

E3WT83              	100.00%		L0PFP3              	100.00%
Bootstrap support for E3WT83 as seed ortholog is 100%.
Bootstrap support for L0PFP3 as seed ortholog is 100%.

Group of orthologs #781. Best score 108 bits
Score difference with first non-orthologous sequence - A.darlingi:108 P.jiroveci:108

E3X6P4              	100.00%		L0P9T1              	100.00%
Bootstrap support for E3X6P4 as seed ortholog is 100%.
Bootstrap support for L0P9T1 as seed ortholog is 100%.

Group of orthologs #782. Best score 107 bits
Score difference with first non-orthologous sequence - A.darlingi:107 P.jiroveci:107

E3WNL6              	100.00%		L0P9F2              	100.00%
Bootstrap support for E3WNL6 as seed ortholog is 100%.
Bootstrap support for L0P9F2 as seed ortholog is 100%.

Group of orthologs #783. Best score 107 bits
Score difference with first non-orthologous sequence - A.darlingi:107 P.jiroveci:107

E3WUY2              	100.00%		L0PEC9              	100.00%
Bootstrap support for E3WUY2 as seed ortholog is 100%.
Bootstrap support for L0PEC9 as seed ortholog is 100%.

Group of orthologs #784. Best score 107 bits
Score difference with first non-orthologous sequence - A.darlingi:57 P.jiroveci:107

E3XF96              	100.00%		L0PFA1              	100.00%
Bootstrap support for E3XF96 as seed ortholog is 99%.
Bootstrap support for L0PFA1 as seed ortholog is 100%.

Group of orthologs #785. Best score 107 bits
Score difference with first non-orthologous sequence - A.darlingi:107 P.jiroveci:107

E3XGE8              	100.00%		L0PGR9              	100.00%
Bootstrap support for E3XGE8 as seed ortholog is 100%.
Bootstrap support for L0PGR9 as seed ortholog is 100%.

Group of orthologs #786. Best score 106 bits
Score difference with first non-orthologous sequence - A.darlingi:106 P.jiroveci:106

E3WLY1              	100.00%		L0PCT4              	100.00%
E3WLR5              	18.71%		
E3WQQ5              	17.71%		
E3WVJ7              	16.04%		
E3WVV3              	12.69%		
E3WNE0              	12.69%		
E3WRQ9              	8.91%		
Bootstrap support for E3WLY1 as seed ortholog is 100%.
Bootstrap support for L0PCT4 as seed ortholog is 100%.

Group of orthologs #787. Best score 106 bits
Score difference with first non-orthologous sequence - A.darlingi:106 P.jiroveci:106

E3X2W7              	100.00%		L0PBH0              	100.00%
                    	       		L0PGS5              	100.00%
Bootstrap support for E3X2W7 as seed ortholog is 100%.
Bootstrap support for L0PBH0 as seed ortholog is 100%.
Bootstrap support for L0PGS5 as seed ortholog is 100%.

Group of orthologs #788. Best score 106 bits
Score difference with first non-orthologous sequence - A.darlingi:106 P.jiroveci:106

E3X6L7              	100.00%		L0PF86              	100.00%
                    	       		L0PC10              	85.53%
Bootstrap support for E3X6L7 as seed ortholog is 100%.
Bootstrap support for L0PF86 as seed ortholog is 100%.

Group of orthologs #789. Best score 106 bits
Score difference with first non-orthologous sequence - A.darlingi:106 P.jiroveci:106

E3WL50              	100.00%		L0PG78              	100.00%
Bootstrap support for E3WL50 as seed ortholog is 100%.
Bootstrap support for L0PG78 as seed ortholog is 100%.

Group of orthologs #790. Best score 106 bits
Score difference with first non-orthologous sequence - A.darlingi:106 P.jiroveci:106

E3WYE3              	100.00%		L0PEV3              	100.00%
Bootstrap support for E3WYE3 as seed ortholog is 100%.
Bootstrap support for L0PEV3 as seed ortholog is 100%.

Group of orthologs #791. Best score 106 bits
Score difference with first non-orthologous sequence - A.darlingi:5 P.jiroveci:106

E3WXR7              	100.00%		L0PG24              	100.00%
Bootstrap support for E3WXR7 as seed ortholog is 55%.
Alternative seed ortholog is E3WL06 (5 bits away from this cluster)
Bootstrap support for L0PG24 as seed ortholog is 100%.

Group of orthologs #792. Best score 106 bits
Score difference with first non-orthologous sequence - A.darlingi:106 P.jiroveci:106

E3X4W7              	100.00%		L0P8S1              	100.00%
Bootstrap support for E3X4W7 as seed ortholog is 100%.
Bootstrap support for L0P8S1 as seed ortholog is 100%.

Group of orthologs #793. Best score 106 bits
Score difference with first non-orthologous sequence - A.darlingi:106 P.jiroveci:106

E3WZZ3              	100.00%		L0PDX2              	100.00%
Bootstrap support for E3WZZ3 as seed ortholog is 100%.
Bootstrap support for L0PDX2 as seed ortholog is 100%.

Group of orthologs #794. Best score 106 bits
Score difference with first non-orthologous sequence - A.darlingi:106 P.jiroveci:106

E3X836              	100.00%		L0PCY1              	100.00%
Bootstrap support for E3X836 as seed ortholog is 100%.
Bootstrap support for L0PCY1 as seed ortholog is 100%.

Group of orthologs #795. Best score 106 bits
Score difference with first non-orthologous sequence - A.darlingi:106 P.jiroveci:106

E3XGD4              	100.00%		L0PCA3              	100.00%
Bootstrap support for E3XGD4 as seed ortholog is 100%.
Bootstrap support for L0PCA3 as seed ortholog is 100%.

Group of orthologs #796. Best score 105 bits
Score difference with first non-orthologous sequence - A.darlingi:105 P.jiroveci:105

E3WN68              	100.00%		L0PE51              	100.00%
Bootstrap support for E3WN68 as seed ortholog is 100%.
Bootstrap support for L0PE51 as seed ortholog is 100%.

Group of orthologs #797. Best score 105 bits
Score difference with first non-orthologous sequence - A.darlingi:105 P.jiroveci:105

E3XB81              	100.00%		L0PG73              	100.00%
Bootstrap support for E3XB81 as seed ortholog is 100%.
Bootstrap support for L0PG73 as seed ortholog is 100%.

Group of orthologs #798. Best score 104 bits
Score difference with first non-orthologous sequence - A.darlingi:17 P.jiroveci:104

E3X572              	100.00%		L0PD22              	100.00%
                    	       		L0PC17              	90.04%
Bootstrap support for E3X572 as seed ortholog is 68%.
Alternative seed ortholog is E3WLG0 (17 bits away from this cluster)
Bootstrap support for L0PD22 as seed ortholog is 100%.

Group of orthologs #799. Best score 103 bits
Score difference with first non-orthologous sequence - A.darlingi:103 P.jiroveci:103

E3WQS9              	100.00%		L0PHJ8              	100.00%
                    	       		L0P888              	60.03%
Bootstrap support for E3WQS9 as seed ortholog is 100%.
Bootstrap support for L0PHJ8 as seed ortholog is 100%.

Group of orthologs #800. Best score 103 bits
Score difference with first non-orthologous sequence - A.darlingi:103 P.jiroveci:103

E3X7P0              	100.00%		L0PGC0              	100.00%
E3X7N9              	42.29%		
Bootstrap support for E3X7P0 as seed ortholog is 100%.
Bootstrap support for L0PGC0 as seed ortholog is 100%.

Group of orthologs #801. Best score 103 bits
Score difference with first non-orthologous sequence - A.darlingi:103 P.jiroveci:103

E3WL05              	100.00%		L0P887              	100.00%
Bootstrap support for E3WL05 as seed ortholog is 100%.
Bootstrap support for L0P887 as seed ortholog is 100%.

Group of orthologs #802. Best score 103 bits
Score difference with first non-orthologous sequence - A.darlingi:103 P.jiroveci:103

E3X4X0              	100.00%		L0P7V8              	100.00%
Bootstrap support for E3X4X0 as seed ortholog is 100%.
Bootstrap support for L0P7V8 as seed ortholog is 100%.

Group of orthologs #803. Best score 103 bits
Score difference with first non-orthologous sequence - A.darlingi:103 P.jiroveci:103

E3X8Y6              	100.00%		L0PAM7              	100.00%
Bootstrap support for E3X8Y6 as seed ortholog is 100%.
Bootstrap support for L0PAM7 as seed ortholog is 100%.

Group of orthologs #804. Best score 103 bits
Score difference with first non-orthologous sequence - A.darlingi:103 P.jiroveci:24

E3X7G6              	100.00%		L0PEK0              	100.00%
Bootstrap support for E3X7G6 as seed ortholog is 100%.
Bootstrap support for L0PEK0 as seed ortholog is 85%.

Group of orthologs #805. Best score 102 bits
Score difference with first non-orthologous sequence - A.darlingi:102 P.jiroveci:102

E3X4J1              	100.00%		L0PF89              	100.00%
E3X4J2              	31.00%		
E3WXV2              	13.60%		
E3X724              	10.29%		
E3X1F2              	5.72%		
Bootstrap support for E3X4J1 as seed ortholog is 100%.
Bootstrap support for L0PF89 as seed ortholog is 100%.

Group of orthologs #806. Best score 102 bits
Score difference with first non-orthologous sequence - A.darlingi:8 P.jiroveci:49

E3WYJ6              	100.00%		L0PHH9              	100.00%
                    	       		L0PA17              	23.11%
Bootstrap support for E3WYJ6 as seed ortholog is 60%.
Alternative seed ortholog is E3WZ43 (8 bits away from this cluster)
Bootstrap support for L0PHH9 as seed ortholog is 93%.

Group of orthologs #807. Best score 102 bits
Score difference with first non-orthologous sequence - A.darlingi:102 P.jiroveci:102

E3X8Y2              	100.00%		L0PFU9              	100.00%
Bootstrap support for E3X8Y2 as seed ortholog is 100%.
Bootstrap support for L0PFU9 as seed ortholog is 100%.

Group of orthologs #808. Best score 101 bits
Score difference with first non-orthologous sequence - A.darlingi:101 P.jiroveci:101

E3WJQ3              	100.00%		L0PA43              	100.00%
Bootstrap support for E3WJQ3 as seed ortholog is 100%.
Bootstrap support for L0PA43 as seed ortholog is 100%.

Group of orthologs #809. Best score 101 bits
Score difference with first non-orthologous sequence - A.darlingi:101 P.jiroveci:101

E3WMV5              	100.00%		L0PAV4              	100.00%
Bootstrap support for E3WMV5 as seed ortholog is 100%.
Bootstrap support for L0PAV4 as seed ortholog is 100%.

Group of orthologs #810. Best score 101 bits
Score difference with first non-orthologous sequence - A.darlingi:101 P.jiroveci:101

E3WQP7              	100.00%		L0PE48              	100.00%
Bootstrap support for E3WQP7 as seed ortholog is 100%.
Bootstrap support for L0PE48 as seed ortholog is 100%.

Group of orthologs #811. Best score 101 bits
Score difference with first non-orthologous sequence - A.darlingi:101 P.jiroveci:101

E3WVE9              	100.00%		L0PEH7              	100.00%
Bootstrap support for E3WVE9 as seed ortholog is 100%.
Bootstrap support for L0PEH7 as seed ortholog is 100%.

Group of orthologs #812. Best score 101 bits
Score difference with first non-orthologous sequence - A.darlingi:101 P.jiroveci:101

E3X8E3              	100.00%		L0PCI0              	100.00%
Bootstrap support for E3X8E3 as seed ortholog is 100%.
Bootstrap support for L0PCI0 as seed ortholog is 100%.

Group of orthologs #813. Best score 101 bits
Score difference with first non-orthologous sequence - A.darlingi:101 P.jiroveci:101

E3XFH2              	100.00%		L0P7Q2              	100.00%
Bootstrap support for E3XFH2 as seed ortholog is 100%.
Bootstrap support for L0P7Q2 as seed ortholog is 100%.

Group of orthologs #814. Best score 100 bits
Score difference with first non-orthologous sequence - A.darlingi:100 P.jiroveci:100

E3X6V7              	100.00%		L0P816              	100.00%
Bootstrap support for E3X6V7 as seed ortholog is 100%.
Bootstrap support for L0P816 as seed ortholog is 100%.

Group of orthologs #815. Best score 99 bits
Score difference with first non-orthologous sequence - A.darlingi:99 P.jiroveci:99

E3X7M9              	100.00%		L0P7W8              	100.00%
                    	       		L0P8R2              	100.00%
Bootstrap support for E3X7M9 as seed ortholog is 100%.
Bootstrap support for L0P7W8 as seed ortholog is 100%.
Bootstrap support for L0P8R2 as seed ortholog is 100%.

Group of orthologs #816. Best score 98 bits
Score difference with first non-orthologous sequence - A.darlingi:98 P.jiroveci:98

E3X0G9              	100.00%		L0P977              	100.00%
                    	       		L0P981              	100.00%
Bootstrap support for E3X0G9 as seed ortholog is 100%.
Bootstrap support for L0P977 as seed ortholog is 100%.
Bootstrap support for L0P981 as seed ortholog is 100%.

Group of orthologs #817. Best score 97 bits
Score difference with first non-orthologous sequence - A.darlingi:97 P.jiroveci:97

E3WNX8              	100.00%		L0PC89              	100.00%
E3X6M6              	17.83%		
E3WQ56              	16.28%		
Bootstrap support for E3WNX8 as seed ortholog is 100%.
Bootstrap support for L0PC89 as seed ortholog is 100%.

Group of orthologs #818. Best score 97 bits
Score difference with first non-orthologous sequence - A.darlingi:97 P.jiroveci:97

E3WPA5              	100.00%		L0PBK9              	100.00%
Bootstrap support for E3WPA5 as seed ortholog is 100%.
Bootstrap support for L0PBK9 as seed ortholog is 100%.

Group of orthologs #819. Best score 97 bits
Score difference with first non-orthologous sequence - A.darlingi:97 P.jiroveci:97

E3WYW6              	100.00%		L0PAS5              	100.00%
Bootstrap support for E3WYW6 as seed ortholog is 100%.
Bootstrap support for L0PAS5 as seed ortholog is 100%.

Group of orthologs #820. Best score 97 bits
Score difference with first non-orthologous sequence - A.darlingi:97 P.jiroveci:97

E3X9G9              	100.00%		L0P8Q8              	100.00%
Bootstrap support for E3X9G9 as seed ortholog is 100%.
Bootstrap support for L0P8Q8 as seed ortholog is 100%.

Group of orthologs #821. Best score 97 bits
Score difference with first non-orthologous sequence - A.darlingi:97 P.jiroveci:97

E3X8P1              	100.00%		L0PCZ2              	100.00%
Bootstrap support for E3X8P1 as seed ortholog is 100%.
Bootstrap support for L0PCZ2 as seed ortholog is 100%.

Group of orthologs #822. Best score 96 bits
Score difference with first non-orthologous sequence - A.darlingi:96 P.jiroveci:29

E3WY20              	100.00%		L0P982              	100.00%
E3X0L4              	12.04%		
E3WP10              	10.77%		
E3WRV6              	8.94%		
E3WM17              	6.02%		
Bootstrap support for E3WY20 as seed ortholog is 100%.
Bootstrap support for L0P982 as seed ortholog is 81%.

Group of orthologs #823. Best score 96 bits
Score difference with first non-orthologous sequence - A.darlingi:96 P.jiroveci:96

E3WYU8              	100.00%		L0PCX0              	100.00%
Bootstrap support for E3WYU8 as seed ortholog is 100%.
Bootstrap support for L0PCX0 as seed ortholog is 100%.

Group of orthologs #824. Best score 95 bits
Score difference with first non-orthologous sequence - A.darlingi:95 P.jiroveci:95

E3WQF8              	100.00%		L0P6Z5              	100.00%
Bootstrap support for E3WQF8 as seed ortholog is 100%.
Bootstrap support for L0P6Z5 as seed ortholog is 100%.

Group of orthologs #825. Best score 95 bits
Score difference with first non-orthologous sequence - A.darlingi:95 P.jiroveci:95

E3WVU3              	100.00%		L0P7G9              	100.00%
Bootstrap support for E3WVU3 as seed ortholog is 100%.
Bootstrap support for L0P7G9 as seed ortholog is 100%.

Group of orthologs #826. Best score 95 bits
Score difference with first non-orthologous sequence - A.darlingi:95 P.jiroveci:95

E3X7J0              	100.00%		L0P8Q1              	100.00%
Bootstrap support for E3X7J0 as seed ortholog is 100%.
Bootstrap support for L0P8Q1 as seed ortholog is 100%.

Group of orthologs #827. Best score 94 bits
Score difference with first non-orthologous sequence - A.darlingi:12 P.jiroveci:94

E3WU92              	100.00%		L0P903              	100.00%
E3X653              	36.72%		
E3WSM7              	6.84%		
Bootstrap support for E3WU92 as seed ortholog is 63%.
Alternative seed ortholog is E3WXS6 (12 bits away from this cluster)
Bootstrap support for L0P903 as seed ortholog is 100%.

Group of orthologs #828. Best score 94 bits
Score difference with first non-orthologous sequence - A.darlingi:94 P.jiroveci:94

E3X5K1              	100.00%		L0P8B5              	100.00%
Bootstrap support for E3X5K1 as seed ortholog is 100%.
Bootstrap support for L0P8B5 as seed ortholog is 100%.

Group of orthologs #829. Best score 94 bits
Score difference with first non-orthologous sequence - A.darlingi:36 P.jiroveci:94

E3X2V8              	100.00%		L0PF75              	100.00%
Bootstrap support for E3X2V8 as seed ortholog is 85%.
Bootstrap support for L0PF75 as seed ortholog is 100%.

Group of orthologs #830. Best score 94 bits
Score difference with first non-orthologous sequence - A.darlingi:94 P.jiroveci:94

E3XBI0              	100.00%		L0P8S6              	100.00%
Bootstrap support for E3XBI0 as seed ortholog is 100%.
Bootstrap support for L0P8S6 as seed ortholog is 100%.

Group of orthologs #831. Best score 94 bits
Score difference with first non-orthologous sequence - A.darlingi:94 P.jiroveci:94

E3XE35              	100.00%		L0PEZ8              	100.00%
Bootstrap support for E3XE35 as seed ortholog is 100%.
Bootstrap support for L0PEZ8 as seed ortholog is 100%.

Group of orthologs #832. Best score 94 bits
Score difference with first non-orthologous sequence - A.darlingi:94 P.jiroveci:94

E3XG99              	100.00%		L0PD23              	100.00%
Bootstrap support for E3XG99 as seed ortholog is 100%.
Bootstrap support for L0PD23 as seed ortholog is 100%.

Group of orthologs #833. Best score 93 bits
Score difference with first non-orthologous sequence - A.darlingi:93 P.jiroveci:93

E3WJA0              	100.00%		L0P9R8              	100.00%
E3WJ98              	11.25%		
Bootstrap support for E3WJA0 as seed ortholog is 100%.
Bootstrap support for L0P9R8 as seed ortholog is 100%.

Group of orthologs #834. Best score 93 bits
Score difference with first non-orthologous sequence - A.darlingi:93 P.jiroveci:93

E3XDA7              	100.00%		L0PG13              	100.00%
Bootstrap support for E3XDA7 as seed ortholog is 100%.
Bootstrap support for L0PG13 as seed ortholog is 100%.

Group of orthologs #835. Best score 92 bits
Score difference with first non-orthologous sequence - A.darlingi:92 P.jiroveci:92

E3WJM0              	100.00%		L0PFW3              	100.00%
Bootstrap support for E3WJM0 as seed ortholog is 100%.
Bootstrap support for L0PFW3 as seed ortholog is 100%.

Group of orthologs #836. Best score 92 bits
Score difference with first non-orthologous sequence - A.darlingi:92 P.jiroveci:92

E3WPY6              	100.00%		L0PAF2              	100.00%
Bootstrap support for E3WPY6 as seed ortholog is 100%.
Bootstrap support for L0PAF2 as seed ortholog is 100%.

Group of orthologs #837. Best score 92 bits
Score difference with first non-orthologous sequence - A.darlingi:92 P.jiroveci:10

E3WZ15              	100.00%		L0PD30              	100.00%
Bootstrap support for E3WZ15 as seed ortholog is 100%.
Bootstrap support for L0PD30 as seed ortholog is 61%.
Alternative seed ortholog is L0P876 (10 bits away from this cluster)

Group of orthologs #838. Best score 92 bits
Score difference with first non-orthologous sequence - A.darlingi:92 P.jiroveci:92

E3X7V1              	100.00%		L0PCH6              	100.00%
Bootstrap support for E3X7V1 as seed ortholog is 100%.
Bootstrap support for L0PCH6 as seed ortholog is 100%.

Group of orthologs #839. Best score 92 bits
Score difference with first non-orthologous sequence - A.darlingi:92 P.jiroveci:92

E3XBN6              	100.00%		L0PC01              	100.00%
Bootstrap support for E3XBN6 as seed ortholog is 100%.
Bootstrap support for L0PC01 as seed ortholog is 100%.

Group of orthologs #840. Best score 91 bits
Score difference with first non-orthologous sequence - A.darlingi:91 P.jiroveci:91

E3X9G3              	100.00%		L0PG49              	100.00%
                    	       		L0PEF9              	84.79%
Bootstrap support for E3X9G3 as seed ortholog is 100%.
Bootstrap support for L0PG49 as seed ortholog is 100%.

Group of orthologs #841. Best score 91 bits
Score difference with first non-orthologous sequence - A.darlingi:36 P.jiroveci:91

E3WIX4              	100.00%		L0PBX5              	100.00%
Bootstrap support for E3WIX4 as seed ortholog is 93%.
Bootstrap support for L0PBX5 as seed ortholog is 100%.

Group of orthologs #842. Best score 91 bits
Score difference with first non-orthologous sequence - A.darlingi:91 P.jiroveci:91

E3WP02              	100.00%		L0PC19              	100.00%
Bootstrap support for E3WP02 as seed ortholog is 100%.
Bootstrap support for L0PC19 as seed ortholog is 100%.

Group of orthologs #843. Best score 91 bits
Score difference with first non-orthologous sequence - A.darlingi:91 P.jiroveci:91

E3WMX4              	100.00%		L0PD92              	100.00%
Bootstrap support for E3WMX4 as seed ortholog is 100%.
Bootstrap support for L0PD92 as seed ortholog is 100%.

Group of orthologs #844. Best score 91 bits
Score difference with first non-orthologous sequence - A.darlingi:91 P.jiroveci:91

E3WVR4              	100.00%		L0P8A1              	100.00%
Bootstrap support for E3WVR4 as seed ortholog is 100%.
Bootstrap support for L0P8A1 as seed ortholog is 100%.

Group of orthologs #845. Best score 91 bits
Score difference with first non-orthologous sequence - A.darlingi:91 P.jiroveci:91

E3X8C2              	100.00%		L0P8W1              	100.00%
Bootstrap support for E3X8C2 as seed ortholog is 100%.
Bootstrap support for L0P8W1 as seed ortholog is 100%.

Group of orthologs #846. Best score 91 bits
Score difference with first non-orthologous sequence - A.darlingi:91 P.jiroveci:13

E3X4V9              	100.00%		L0PEV0              	100.00%
Bootstrap support for E3X4V9 as seed ortholog is 100%.
Bootstrap support for L0PEV0 as seed ortholog is 67%.
Alternative seed ortholog is L0PAT8 (13 bits away from this cluster)

Group of orthologs #847. Best score 90 bits
Score difference with first non-orthologous sequence - A.darlingi:90 P.jiroveci:90

E3WZ20              	100.00%		L0PFL1              	100.00%
Bootstrap support for E3WZ20 as seed ortholog is 100%.
Bootstrap support for L0PFL1 as seed ortholog is 100%.

Group of orthologs #848. Best score 89 bits
Score difference with first non-orthologous sequence - A.darlingi:89 P.jiroveci:89

E3XC01              	100.00%		L0PEQ2              	100.00%
                    	       		L0P999              	61.23%
Bootstrap support for E3XC01 as seed ortholog is 100%.
Bootstrap support for L0PEQ2 as seed ortholog is 100%.

Group of orthologs #849. Best score 89 bits
Score difference with first non-orthologous sequence - A.darlingi:89 P.jiroveci:21

E3WL00              	100.00%		L0P9Q9              	100.00%
Bootstrap support for E3WL00 as seed ortholog is 100%.
Bootstrap support for L0P9Q9 as seed ortholog is 70%.
Alternative seed ortholog is L0P8B9 (21 bits away from this cluster)

Group of orthologs #850. Best score 89 bits
Score difference with first non-orthologous sequence - A.darlingi:89 P.jiroveci:89

E3X315              	100.00%		L0PFR0              	100.00%
Bootstrap support for E3X315 as seed ortholog is 100%.
Bootstrap support for L0PFR0 as seed ortholog is 100%.

Group of orthologs #851. Best score 89 bits
Score difference with first non-orthologous sequence - A.darlingi:89 P.jiroveci:89

E3XAM3              	100.00%		L0P9F1              	100.00%
Bootstrap support for E3XAM3 as seed ortholog is 100%.
Bootstrap support for L0P9F1 as seed ortholog is 100%.

Group of orthologs #852. Best score 88 bits
Score difference with first non-orthologous sequence - A.darlingi:88 P.jiroveci:88

E3X9R9              	100.00%		L0PGL6              	100.00%
Bootstrap support for E3X9R9 as seed ortholog is 100%.
Bootstrap support for L0PGL6 as seed ortholog is 100%.

Group of orthologs #853. Best score 88 bits
Score difference with first non-orthologous sequence - A.darlingi:88 P.jiroveci:88

E3XDD6              	100.00%		L0PEX4              	100.00%
Bootstrap support for E3XDD6 as seed ortholog is 100%.
Bootstrap support for L0PEX4 as seed ortholog is 100%.

Group of orthologs #854. Best score 87 bits
Score difference with first non-orthologous sequence - A.darlingi:87 P.jiroveci:87

E3WQ53              	100.00%		L0PBI8              	100.00%
Bootstrap support for E3WQ53 as seed ortholog is 100%.
Bootstrap support for L0PBI8 as seed ortholog is 100%.

Group of orthologs #855. Best score 87 bits
Score difference with first non-orthologous sequence - A.darlingi:87 P.jiroveci:87

E3WVQ1              	100.00%		L0PAF1              	100.00%
Bootstrap support for E3WVQ1 as seed ortholog is 100%.
Bootstrap support for L0PAF1 as seed ortholog is 100%.

Group of orthologs #856. Best score 87 bits
Score difference with first non-orthologous sequence - A.darlingi:87 P.jiroveci:87

E3X481              	100.00%		L0P9C0              	100.00%
Bootstrap support for E3X481 as seed ortholog is 100%.
Bootstrap support for L0P9C0 as seed ortholog is 100%.

Group of orthologs #857. Best score 86 bits
Score difference with first non-orthologous sequence - A.darlingi:86 P.jiroveci:86

E3X286              	100.00%		L0PC99              	100.00%
                    	       		L0PIP5              	9.52%
Bootstrap support for E3X286 as seed ortholog is 100%.
Bootstrap support for L0PC99 as seed ortholog is 100%.

Group of orthologs #858. Best score 86 bits
Score difference with first non-orthologous sequence - A.darlingi:86 P.jiroveci:86

E3WKP6              	100.00%		L0PFD5              	100.00%
Bootstrap support for E3WKP6 as seed ortholog is 100%.
Bootstrap support for L0PFD5 as seed ortholog is 100%.

Group of orthologs #859. Best score 86 bits
Score difference with first non-orthologous sequence - A.darlingi:30 P.jiroveci:86

E3WSD7              	100.00%		L0PBZ4              	100.00%
Bootstrap support for E3WSD7 as seed ortholog is 88%.
Bootstrap support for L0PBZ4 as seed ortholog is 100%.

Group of orthologs #860. Best score 86 bits
Score difference with first non-orthologous sequence - A.darlingi:86 P.jiroveci:86

E3X6U8              	100.00%		L0PHQ1              	100.00%
Bootstrap support for E3X6U8 as seed ortholog is 100%.
Bootstrap support for L0PHQ1 as seed ortholog is 100%.

Group of orthologs #861. Best score 85 bits
Score difference with first non-orthologous sequence - A.darlingi:33 P.jiroveci:85

E3WY37              	100.00%		L0PFT5              	100.00%
Bootstrap support for E3WY37 as seed ortholog is 93%.
Bootstrap support for L0PFT5 as seed ortholog is 100%.

Group of orthologs #862. Best score 85 bits
Score difference with first non-orthologous sequence - A.darlingi:85 P.jiroveci:85

E3XBS9              	100.00%		L0PA68              	100.00%
Bootstrap support for E3XBS9 as seed ortholog is 100%.
Bootstrap support for L0PA68 as seed ortholog is 100%.

Group of orthologs #863. Best score 84 bits
Score difference with first non-orthologous sequence - A.darlingi:84 P.jiroveci:84

E3WTR3              	100.00%		L0PF93              	100.00%
Bootstrap support for E3WTR3 as seed ortholog is 100%.
Bootstrap support for L0PF93 as seed ortholog is 100%.

Group of orthologs #864. Best score 84 bits
Score difference with first non-orthologous sequence - A.darlingi:84 P.jiroveci:84

E3WUK7              	100.00%		L0PF82              	100.00%
Bootstrap support for E3WUK7 as seed ortholog is 100%.
Bootstrap support for L0PF82 as seed ortholog is 100%.

Group of orthologs #865. Best score 83 bits
Score difference with first non-orthologous sequence - A.darlingi:83 P.jiroveci:83

E3WNY0              	100.00%		L0PAD3              	100.00%
Bootstrap support for E3WNY0 as seed ortholog is 100%.
Bootstrap support for L0PAD3 as seed ortholog is 100%.

Group of orthologs #866. Best score 83 bits
Score difference with first non-orthologous sequence - A.darlingi:83 P.jiroveci:83

E3X5B8              	100.00%		L0PF62              	100.00%
Bootstrap support for E3X5B8 as seed ortholog is 100%.
Bootstrap support for L0PF62 as seed ortholog is 100%.

Group of orthologs #867. Best score 82 bits
Score difference with first non-orthologous sequence - A.darlingi:82 P.jiroveci:82

E3X6D0              	100.00%		L0PGM7              	100.00%
                    	       		L0PGY6              	100.00%
Bootstrap support for E3X6D0 as seed ortholog is 100%.
Bootstrap support for L0PGM7 as seed ortholog is 100%.
Bootstrap support for L0PGY6 as seed ortholog is 100%.

Group of orthologs #868. Best score 82 bits
Score difference with first non-orthologous sequence - A.darlingi:82 P.jiroveci:82

E3WQ09              	100.00%		L0PI42              	100.00%
Bootstrap support for E3WQ09 as seed ortholog is 100%.
Bootstrap support for L0PI42 as seed ortholog is 100%.

Group of orthologs #869. Best score 82 bits
Score difference with first non-orthologous sequence - A.darlingi:82 P.jiroveci:82

E3WSV8              	100.00%		L0PFT3              	100.00%
Bootstrap support for E3WSV8 as seed ortholog is 100%.
Bootstrap support for L0PFT3 as seed ortholog is 100%.

Group of orthologs #870. Best score 82 bits
Score difference with first non-orthologous sequence - A.darlingi:82 P.jiroveci:82

E3X1W8              	100.00%		L0PBQ7              	100.00%
Bootstrap support for E3X1W8 as seed ortholog is 100%.
Bootstrap support for L0PBQ7 as seed ortholog is 100%.

Group of orthologs #871. Best score 82 bits
Score difference with first non-orthologous sequence - A.darlingi:82 P.jiroveci:82

E3XAK4              	100.00%		L0P7A1              	100.00%
Bootstrap support for E3XAK4 as seed ortholog is 100%.
Bootstrap support for L0P7A1 as seed ortholog is 100%.

Group of orthologs #872. Best score 82 bits
Score difference with first non-orthologous sequence - A.darlingi:39 P.jiroveci:82

E3XEY7              	100.00%		L0PBP5              	100.00%
Bootstrap support for E3XEY7 as seed ortholog is 90%.
Bootstrap support for L0PBP5 as seed ortholog is 100%.

Group of orthologs #873. Best score 82 bits
Score difference with first non-orthologous sequence - A.darlingi:82 P.jiroveci:82

E3XEU4              	100.00%		L0PFM9              	100.00%
Bootstrap support for E3XEU4 as seed ortholog is 100%.
Bootstrap support for L0PFM9 as seed ortholog is 100%.

Group of orthologs #874. Best score 81 bits
Score difference with first non-orthologous sequence - A.darlingi:81 P.jiroveci:81

E3WPW7              	100.00%		L0PC66              	100.00%
                    	       		L0PBN8              	83.06%
Bootstrap support for E3WPW7 as seed ortholog is 100%.
Bootstrap support for L0PC66 as seed ortholog is 100%.

Group of orthologs #875. Best score 81 bits
Score difference with first non-orthologous sequence - A.darlingi:81 P.jiroveci:19

E3WSJ2              	100.00%		L0PCZ0              	100.00%
Bootstrap support for E3WSJ2 as seed ortholog is 100%.
Bootstrap support for L0PCZ0 as seed ortholog is 78%.

Group of orthologs #876. Best score 81 bits
Score difference with first non-orthologous sequence - A.darlingi:81 P.jiroveci:81

E3WWP4              	100.00%		L0PDW0              	100.00%
Bootstrap support for E3WWP4 as seed ortholog is 100%.
Bootstrap support for L0PDW0 as seed ortholog is 100%.

Group of orthologs #877. Best score 81 bits
Score difference with first non-orthologous sequence - A.darlingi:81 P.jiroveci:81

E3WVM6              	100.00%		L0PGF4              	100.00%
Bootstrap support for E3WVM6 as seed ortholog is 100%.
Bootstrap support for L0PGF4 as seed ortholog is 100%.

Group of orthologs #878. Best score 80 bits
Score difference with first non-orthologous sequence - A.darlingi:80 P.jiroveci:80

E3WL89              	100.00%		L0PHI9              	100.00%
E3X334              	7.57%		
E3WN95              	7.45%		
E3X3F7              	6.19%		
E3X9E9              	5.73%		
E3XB31              	5.62%		
E3WYN9              	5.39%		
Bootstrap support for E3WL89 as seed ortholog is 100%.
Bootstrap support for L0PHI9 as seed ortholog is 100%.

Group of orthologs #879. Best score 80 bits
Score difference with first non-orthologous sequence - A.darlingi:80 P.jiroveci:80

E3WKB9              	100.00%		L0P9V4              	100.00%
Bootstrap support for E3WKB9 as seed ortholog is 100%.
Bootstrap support for L0P9V4 as seed ortholog is 100%.

Group of orthologs #880. Best score 80 bits
Score difference with first non-orthologous sequence - A.darlingi:80 P.jiroveci:36

E3WKS2              	100.00%		L0PCQ5              	100.00%
Bootstrap support for E3WKS2 as seed ortholog is 100%.
Bootstrap support for L0PCQ5 as seed ortholog is 99%.

Group of orthologs #881. Best score 80 bits
Score difference with first non-orthologous sequence - A.darlingi:80 P.jiroveci:80

E3XE52              	100.00%		L0PHI8              	100.00%
Bootstrap support for E3XE52 as seed ortholog is 100%.
Bootstrap support for L0PHI8 as seed ortholog is 100%.

Group of orthologs #882. Best score 79 bits
Score difference with first non-orthologous sequence - A.darlingi:79 P.jiroveci:79

E3X2Q3              	100.00%		L0PIN1              	100.00%
                    	       		L0PDW7              	48.31%
Bootstrap support for E3X2Q3 as seed ortholog is 100%.
Bootstrap support for L0PIN1 as seed ortholog is 100%.

Group of orthologs #883. Best score 79 bits
Score difference with first non-orthologous sequence - A.darlingi:79 P.jiroveci:79

E3XCY8              	100.00%		L0PDB9              	100.00%
Bootstrap support for E3XCY8 as seed ortholog is 100%.
Bootstrap support for L0PDB9 as seed ortholog is 100%.

Group of orthologs #884. Best score 78 bits
Score difference with first non-orthologous sequence - A.darlingi:78 P.jiroveci:78

E3XC13              	100.00%		L0PG18              	100.00%
Bootstrap support for E3XC13 as seed ortholog is 100%.
Bootstrap support for L0PG18 as seed ortholog is 100%.

Group of orthologs #885. Best score 78 bits
Score difference with first non-orthologous sequence - A.darlingi:78 P.jiroveci:78

E3XFM5              	100.00%		L0PDP9              	100.00%
Bootstrap support for E3XFM5 as seed ortholog is 100%.
Bootstrap support for L0PDP9 as seed ortholog is 100%.

Group of orthologs #886. Best score 77 bits
Score difference with first non-orthologous sequence - A.darlingi:25 P.jiroveci:77

E3WZN3              	100.00%		L0PBK6              	100.00%
E3WM57              	34.92%		
E3WRT5              	34.39%		
E3WZN1              	34.39%		
E3WWK3              	34.04%		
E3WYI9              	33.69%		
E3WQV8              	31.39%		
E3WK54              	29.63%		
E3XBD8              	28.92%		
E3XEH3              	27.87%		
E3WRL7              	21.69%		
E3WXN1              	21.69%		
E3WM53              	20.63%		
E3WRL4              	20.28%		
E3WRW7              	18.69%		
E3WRL5              	17.46%		
E3WR81              	16.58%		
E3WNR7              	16.40%		
E3WM09              	15.52%		
E3WY17              	14.99%		
E3X8D8              	10.93%		
E3WVB1              	9.35%		
E3WL85              	8.82%		
E3WP85              	8.29%		
E3WR51              	7.94%		
E3WP21              	7.23%		
E3XAN3              	6.88%		
E3WPU9              	5.64%		
E3XG08              	5.64%		
Bootstrap support for E3WZN3 as seed ortholog is 77%.
Bootstrap support for L0PBK6 as seed ortholog is 100%.

Group of orthologs #887. Best score 77 bits
Score difference with first non-orthologous sequence - A.darlingi:77 P.jiroveci:77

E3WVQ2              	100.00%		L0P8J6              	100.00%
Bootstrap support for E3WVQ2 as seed ortholog is 100%.
Bootstrap support for L0P8J6 as seed ortholog is 100%.

Group of orthologs #888. Best score 77 bits
Score difference with first non-orthologous sequence - A.darlingi:77 P.jiroveci:77

E3X9D7              	100.00%		L0PDZ4              	100.00%
Bootstrap support for E3X9D7 as seed ortholog is 100%.
Bootstrap support for L0PDZ4 as seed ortholog is 100%.

Group of orthologs #889. Best score 76 bits
Score difference with first non-orthologous sequence - A.darlingi:2 P.jiroveci:76

E3WT07              	100.00%		L0PCS6              	100.00%
E3WSY4              	13.23%		
E3WRA1              	13.13%		
E3X005              	8.02%		
Bootstrap support for E3WT07 as seed ortholog is 51%.
Alternative seed ortholog is E3WPS2 (2 bits away from this cluster)
Bootstrap support for L0PCS6 as seed ortholog is 100%.

Group of orthologs #890. Best score 76 bits
Score difference with first non-orthologous sequence - A.darlingi:76 P.jiroveci:76

E3X012              	100.00%		L0PD85              	100.00%
                    	       		L0PGV7              	63.11%
Bootstrap support for E3X012 as seed ortholog is 100%.
Bootstrap support for L0PD85 as seed ortholog is 100%.

Group of orthologs #891. Best score 76 bits
Score difference with first non-orthologous sequence - A.darlingi:76 P.jiroveci:76

E3WJ62              	100.00%		L0P948              	100.00%
Bootstrap support for E3WJ62 as seed ortholog is 100%.
Bootstrap support for L0P948 as seed ortholog is 100%.

Group of orthologs #892. Best score 76 bits
Score difference with first non-orthologous sequence - A.darlingi:76 P.jiroveci:76

E3WUN5              	100.00%		L0PF50              	100.00%
Bootstrap support for E3WUN5 as seed ortholog is 100%.
Bootstrap support for L0PF50 as seed ortholog is 100%.

Group of orthologs #893. Best score 76 bits
Score difference with first non-orthologous sequence - A.darlingi:76 P.jiroveci:24

E3X5C1              	100.00%		L0PFF3              	100.00%
Bootstrap support for E3X5C1 as seed ortholog is 100%.
Bootstrap support for L0PFF3 as seed ortholog is 80%.

Group of orthologs #894. Best score 76 bits
Score difference with first non-orthologous sequence - A.darlingi:76 P.jiroveci:17

E3XDI1              	100.00%		L0PEH9              	100.00%
Bootstrap support for E3XDI1 as seed ortholog is 100%.
Bootstrap support for L0PEH9 as seed ortholog is 71%.
Alternative seed ortholog is L0PD05 (17 bits away from this cluster)

Group of orthologs #895. Best score 75 bits
Score difference with first non-orthologous sequence - A.darlingi:31 P.jiroveci:16

E3XDH6              	100.00%		L0PDF0              	100.00%
Bootstrap support for E3XDH6 as seed ortholog is 89%.
Bootstrap support for L0PDF0 as seed ortholog is 71%.
Alternative seed ortholog is L0PE10 (16 bits away from this cluster)

Group of orthologs #896. Best score 74 bits
Score difference with first non-orthologous sequence - A.darlingi:74 P.jiroveci:74

E3WQG1              	100.00%		L0PAA3              	100.00%
E3X9T7              	15.17%		
Bootstrap support for E3WQG1 as seed ortholog is 100%.
Bootstrap support for L0PAA3 as seed ortholog is 100%.

Group of orthologs #897. Best score 74 bits
Score difference with first non-orthologous sequence - A.darlingi:74 P.jiroveci:74

E3XEB8              	100.00%		L0PGP3              	100.00%
E3WYL4              	35.40%		
Bootstrap support for E3XEB8 as seed ortholog is 100%.
Bootstrap support for L0PGP3 as seed ortholog is 100%.

Group of orthologs #898. Best score 74 bits
Score difference with first non-orthologous sequence - A.darlingi:74 P.jiroveci:32

E3WY09              	100.00%		L0P9G4              	100.00%
Bootstrap support for E3WY09 as seed ortholog is 100%.
Bootstrap support for L0P9G4 as seed ortholog is 85%.

Group of orthologs #899. Best score 74 bits
Score difference with first non-orthologous sequence - A.darlingi:74 P.jiroveci:74

E3XAB9              	100.00%		L0PFF1              	100.00%
Bootstrap support for E3XAB9 as seed ortholog is 100%.
Bootstrap support for L0PFF1 as seed ortholog is 100%.

Group of orthologs #900. Best score 74 bits
Score difference with first non-orthologous sequence - A.darlingi:74 P.jiroveci:74

E3XDY3              	100.00%		L0PF45              	100.00%
Bootstrap support for E3XDY3 as seed ortholog is 100%.
Bootstrap support for L0PF45 as seed ortholog is 100%.

Group of orthologs #901. Best score 74 bits
Score difference with first non-orthologous sequence - A.darlingi:74 P.jiroveci:74

E3XFB8              	100.00%		L0PDY4              	100.00%
Bootstrap support for E3XFB8 as seed ortholog is 100%.
Bootstrap support for L0PDY4 as seed ortholog is 100%.

Group of orthologs #902. Best score 73 bits
Score difference with first non-orthologous sequence - A.darlingi:73 P.jiroveci:73

E3WRK7              	100.00%		L0PAK9              	100.00%
Bootstrap support for E3WRK7 as seed ortholog is 100%.
Bootstrap support for L0PAK9 as seed ortholog is 100%.

Group of orthologs #903. Best score 73 bits
Score difference with first non-orthologous sequence - A.darlingi:11 P.jiroveci:73

E3WWD0              	100.00%		L0P8G6              	100.00%
Bootstrap support for E3WWD0 as seed ortholog is 63%.
Alternative seed ortholog is E3X3B9 (11 bits away from this cluster)
Bootstrap support for L0P8G6 as seed ortholog is 100%.

Group of orthologs #904. Best score 73 bits
Score difference with first non-orthologous sequence - A.darlingi:73 P.jiroveci:73

E3WS28              	100.00%		L0PGK9              	100.00%
Bootstrap support for E3WS28 as seed ortholog is 100%.
Bootstrap support for L0PGK9 as seed ortholog is 100%.

Group of orthologs #905. Best score 73 bits
Score difference with first non-orthologous sequence - A.darlingi:73 P.jiroveci:73

E3WXJ8              	100.00%		L0PDG4              	100.00%
Bootstrap support for E3WXJ8 as seed ortholog is 100%.
Bootstrap support for L0PDG4 as seed ortholog is 100%.

Group of orthologs #906. Best score 73 bits
Score difference with first non-orthologous sequence - A.darlingi:73 P.jiroveci:73

E3X9N4              	100.00%		L0PFB0              	100.00%
Bootstrap support for E3X9N4 as seed ortholog is 100%.
Bootstrap support for L0PFB0 as seed ortholog is 100%.

Group of orthologs #907. Best score 72 bits
Score difference with first non-orthologous sequence - A.darlingi:72 P.jiroveci:72

E3X991              	100.00%		L0PGX3              	100.00%
E3WSE4              	24.92%		
E3X4K1              	18.69%		
Bootstrap support for E3X991 as seed ortholog is 100%.
Bootstrap support for L0PGX3 as seed ortholog is 100%.

Group of orthologs #908. Best score 72 bits
Score difference with first non-orthologous sequence - A.darlingi:72 P.jiroveci:72

E3WL33              	100.00%		L0PE69              	100.00%
Bootstrap support for E3WL33 as seed ortholog is 100%.
Bootstrap support for L0PE69 as seed ortholog is 100%.

Group of orthologs #909. Best score 72 bits
Score difference with first non-orthologous sequence - A.darlingi:72 P.jiroveci:72

E3X6S9              	100.00%		L0PD91              	100.00%
Bootstrap support for E3X6S9 as seed ortholog is 100%.
Bootstrap support for L0PD91 as seed ortholog is 100%.

Group of orthologs #910. Best score 72 bits
Score difference with first non-orthologous sequence - A.darlingi:72 P.jiroveci:72

E3X9N8              	100.00%		L0PE73              	100.00%
Bootstrap support for E3X9N8 as seed ortholog is 100%.
Bootstrap support for L0PE73 as seed ortholog is 100%.

Group of orthologs #911. Best score 71 bits
Score difference with first non-orthologous sequence - A.darlingi:71 P.jiroveci:71

E3WTL7              	100.00%		L0P9T8              	100.00%
E3WKJ3              	27.58%		
Bootstrap support for E3WTL7 as seed ortholog is 100%.
Bootstrap support for L0P9T8 as seed ortholog is 100%.

Group of orthologs #912. Best score 71 bits
Score difference with first non-orthologous sequence - A.darlingi:71 P.jiroveci:71

E3X3B6              	100.00%		L0PFU3              	100.00%
E3XEB1              	20.64%		
Bootstrap support for E3X3B6 as seed ortholog is 100%.
Bootstrap support for L0PFU3 as seed ortholog is 100%.

Group of orthologs #913. Best score 71 bits
Score difference with first non-orthologous sequence - A.darlingi:71 P.jiroveci:71

E3XCX3              	100.00%		L0P8T2              	100.00%
                    	       		L0PA19              	83.24%
Bootstrap support for E3XCX3 as seed ortholog is 100%.
Bootstrap support for L0P8T2 as seed ortholog is 100%.

Group of orthologs #914. Best score 71 bits
Score difference with first non-orthologous sequence - A.darlingi:71 P.jiroveci:71

E3WRK3              	100.00%		L0P813              	100.00%
Bootstrap support for E3WRK3 as seed ortholog is 100%.
Bootstrap support for L0P813 as seed ortholog is 100%.

Group of orthologs #915. Best score 71 bits
Score difference with first non-orthologous sequence - A.darlingi:71 P.jiroveci:71

E3WT85              	100.00%		L0P937              	100.00%
Bootstrap support for E3WT85 as seed ortholog is 100%.
Bootstrap support for L0P937 as seed ortholog is 100%.

Group of orthologs #916. Best score 71 bits
Score difference with first non-orthologous sequence - A.darlingi:71 P.jiroveci:71

E3WSW7              	100.00%		L0PFR5              	100.00%
Bootstrap support for E3WSW7 as seed ortholog is 100%.
Bootstrap support for L0PFR5 as seed ortholog is 100%.

Group of orthologs #917. Best score 71 bits
Score difference with first non-orthologous sequence - A.darlingi:71 P.jiroveci:71

E3X0U3              	100.00%		L0PBR0              	100.00%
Bootstrap support for E3X0U3 as seed ortholog is 100%.
Bootstrap support for L0PBR0 as seed ortholog is 100%.

Group of orthologs #918. Best score 71 bits
Score difference with first non-orthologous sequence - A.darlingi:71 P.jiroveci:71

E3XAF8              	100.00%		L0PAF5              	100.00%
Bootstrap support for E3XAF8 as seed ortholog is 100%.
Bootstrap support for L0PAF5 as seed ortholog is 100%.

Group of orthologs #919. Best score 70 bits
Score difference with first non-orthologous sequence - A.darlingi:70 P.jiroveci:70

E3WLP9              	100.00%		L0PFI7              	100.00%
Bootstrap support for E3WLP9 as seed ortholog is 100%.
Bootstrap support for L0PFI7 as seed ortholog is 100%.

Group of orthologs #920. Best score 70 bits
Score difference with first non-orthologous sequence - A.darlingi:70 P.jiroveci:70

E3WUZ5              	100.00%		L0P733              	100.00%
Bootstrap support for E3WUZ5 as seed ortholog is 100%.
Bootstrap support for L0P733 as seed ortholog is 100%.

Group of orthologs #921. Best score 69 bits
Score difference with first non-orthologous sequence - A.darlingi:69 P.jiroveci:69

E3X4Z0              	100.00%		L0PCQ9              	100.00%
E3XE39              	5.31%		
Bootstrap support for E3X4Z0 as seed ortholog is 100%.
Bootstrap support for L0PCQ9 as seed ortholog is 100%.

Group of orthologs #922. Best score 69 bits
Score difference with first non-orthologous sequence - A.darlingi:69 P.jiroveci:69

E3WNN3              	100.00%		L0PBS8              	100.00%
Bootstrap support for E3WNN3 as seed ortholog is 100%.
Bootstrap support for L0PBS8 as seed ortholog is 100%.

Group of orthologs #923. Best score 69 bits
Score difference with first non-orthologous sequence - A.darlingi:69 P.jiroveci:69

E3WPB2              	100.00%		L0PBU1              	100.00%
Bootstrap support for E3WPB2 as seed ortholog is 100%.
Bootstrap support for L0PBU1 as seed ortholog is 100%.

Group of orthologs #924. Best score 69 bits
Score difference with first non-orthologous sequence - A.darlingi:69 P.jiroveci:69

E3WRR9              	100.00%		L0PHZ2              	100.00%
Bootstrap support for E3WRR9 as seed ortholog is 100%.
Bootstrap support for L0PHZ2 as seed ortholog is 100%.

Group of orthologs #925. Best score 69 bits
Score difference with first non-orthologous sequence - A.darlingi:69 P.jiroveci:69

E3X5X5              	100.00%		L0PGR8              	100.00%
Bootstrap support for E3X5X5 as seed ortholog is 100%.
Bootstrap support for L0PGR8 as seed ortholog is 100%.

Group of orthologs #926. Best score 69 bits
Score difference with first non-orthologous sequence - A.darlingi:8 P.jiroveci:69

E3XFF1              	100.00%		L0PCM4              	100.00%
Bootstrap support for E3XFF1 as seed ortholog is 73%.
Alternative seed ortholog is E3X9S0 (8 bits away from this cluster)
Bootstrap support for L0PCM4 as seed ortholog is 100%.

Group of orthologs #927. Best score 67 bits
Score difference with first non-orthologous sequence - A.darlingi:67 P.jiroveci:67

E3WUX9              	100.00%		L0PAI2              	100.00%
E3XAQ2              	33.67%		
E3WQM7              	32.91%		
E3WW22              	25.26%		
Bootstrap support for E3WUX9 as seed ortholog is 100%.
Bootstrap support for L0PAI2 as seed ortholog is 100%.

Group of orthologs #928. Best score 67 bits
Score difference with first non-orthologous sequence - A.darlingi:67 P.jiroveci:67

E3WYP0              	100.00%		L0PEB8              	100.00%
Bootstrap support for E3WYP0 as seed ortholog is 100%.
Bootstrap support for L0PEB8 as seed ortholog is 100%.

Group of orthologs #929. Best score 67 bits
Score difference with first non-orthologous sequence - A.darlingi:1 P.jiroveci:11

E3XF39              	100.00%		L0PBE1              	100.00%
Bootstrap support for E3XF39 as seed ortholog is 57%.
Alternative seed ortholog is E3WQC2 (1 bits away from this cluster)
Bootstrap support for L0PBE1 as seed ortholog is 64%.
Alternative seed ortholog is L0PF17 (11 bits away from this cluster)

Group of orthologs #930. Best score 66 bits
Score difference with first non-orthologous sequence - A.darlingi:66 P.jiroveci:66

E3X1X4              	100.00%		L0PDZ0              	100.00%
Bootstrap support for E3X1X4 as seed ortholog is 100%.
Bootstrap support for L0PDZ0 as seed ortholog is 100%.

Group of orthologs #931. Best score 66 bits
Score difference with first non-orthologous sequence - A.darlingi:66 P.jiroveci:66

E3X3G8              	100.00%		L0PE66              	100.00%
Bootstrap support for E3X3G8 as seed ortholog is 100%.
Bootstrap support for L0PE66 as seed ortholog is 100%.

Group of orthologs #932. Best score 65 bits
Score difference with first non-orthologous sequence - A.darlingi:65 P.jiroveci:65

E3WJJ4              	100.00%		L0P7P7              	100.00%
Bootstrap support for E3WJJ4 as seed ortholog is 100%.
Bootstrap support for L0P7P7 as seed ortholog is 100%.

Group of orthologs #933. Best score 65 bits
Score difference with first non-orthologous sequence - A.darlingi:65 P.jiroveci:65

E3WSL8              	100.00%		L0P8D1              	100.00%
Bootstrap support for E3WSL8 as seed ortholog is 100%.
Bootstrap support for L0P8D1 as seed ortholog is 100%.

Group of orthologs #934. Best score 65 bits
Score difference with first non-orthologous sequence - A.darlingi:65 P.jiroveci:65

E3WM39              	100.00%		L0PEH3              	100.00%
Bootstrap support for E3WM39 as seed ortholog is 100%.
Bootstrap support for L0PEH3 as seed ortholog is 100%.

Group of orthologs #935. Best score 65 bits
Score difference with first non-orthologous sequence - A.darlingi:65 P.jiroveci:65

E3WP63              	100.00%		L0PD90              	100.00%
Bootstrap support for E3WP63 as seed ortholog is 100%.
Bootstrap support for L0PD90 as seed ortholog is 100%.

Group of orthologs #936. Best score 65 bits
Score difference with first non-orthologous sequence - A.darlingi:65 P.jiroveci:65

E3X1M8              	100.00%		L0PDZ3              	100.00%
Bootstrap support for E3X1M8 as seed ortholog is 100%.
Bootstrap support for L0PDZ3 as seed ortholog is 100%.

Group of orthologs #937. Best score 64 bits
Score difference with first non-orthologous sequence - A.darlingi:64 P.jiroveci:64

E3X9F4              	100.00%		L0P7Y1              	100.00%
Bootstrap support for E3X9F4 as seed ortholog is 100%.
Bootstrap support for L0P7Y1 as seed ortholog is 100%.

Group of orthologs #938. Best score 63 bits
Score difference with first non-orthologous sequence - A.darlingi:63 P.jiroveci:63

E3WRY0              	100.00%		L0PCD9              	100.00%
Bootstrap support for E3WRY0 as seed ortholog is 100%.
Bootstrap support for L0PCD9 as seed ortholog is 100%.

Group of orthologs #939. Best score 62 bits
Score difference with first non-orthologous sequence - A.darlingi:62 P.jiroveci:62

E3X6L2              	100.00%		L0PEW1              	100.00%
                    	       		L0P9F3              	8.32%
Bootstrap support for E3X6L2 as seed ortholog is 100%.
Bootstrap support for L0PEW1 as seed ortholog is 100%.

Group of orthologs #940. Best score 62 bits
Score difference with first non-orthologous sequence - A.darlingi:62 P.jiroveci:62

E3WLQ2              	100.00%		L0PDI5              	100.00%
Bootstrap support for E3WLQ2 as seed ortholog is 100%.
Bootstrap support for L0PDI5 as seed ortholog is 100%.

Group of orthologs #941. Best score 62 bits
Score difference with first non-orthologous sequence - A.darlingi:62 P.jiroveci:62

E3WQ44              	100.00%		L0PGZ4              	100.00%
Bootstrap support for E3WQ44 as seed ortholog is 100%.
Bootstrap support for L0PGZ4 as seed ortholog is 100%.

Group of orthologs #942. Best score 62 bits
Score difference with first non-orthologous sequence - A.darlingi:62 P.jiroveci:62

E3WTZ2              	100.00%		L0PGG4              	100.00%
Bootstrap support for E3WTZ2 as seed ortholog is 100%.
Bootstrap support for L0PGG4 as seed ortholog is 100%.

Group of orthologs #943. Best score 62 bits
Score difference with first non-orthologous sequence - A.darlingi:62 P.jiroveci:62

E3X4W1              	100.00%		L0PAT1              	100.00%
Bootstrap support for E3X4W1 as seed ortholog is 100%.
Bootstrap support for L0PAT1 as seed ortholog is 100%.

Group of orthologs #944. Best score 62 bits
Score difference with first non-orthologous sequence - A.darlingi:62 P.jiroveci:62

E3XAH7              	100.00%		L0P8J7              	100.00%
Bootstrap support for E3XAH7 as seed ortholog is 100%.
Bootstrap support for L0P8J7 as seed ortholog is 100%.

Group of orthologs #945. Best score 62 bits
Score difference with first non-orthologous sequence - A.darlingi:62 P.jiroveci:62

E3XDY6              	100.00%		L0PHE7              	100.00%
Bootstrap support for E3XDY6 as seed ortholog is 100%.
Bootstrap support for L0PHE7 as seed ortholog is 100%.

Group of orthologs #946. Best score 61 bits
Score difference with first non-orthologous sequence - A.darlingi:61 P.jiroveci:61

E3X451              	100.00%		L0P9W7              	100.00%
E3WW92              	8.29%		
Bootstrap support for E3X451 as seed ortholog is 100%.
Bootstrap support for L0P9W7 as seed ortholog is 100%.

Group of orthologs #947. Best score 61 bits
Score difference with first non-orthologous sequence - A.darlingi:61 P.jiroveci:61

E3WW58              	100.00%		L0PDR2              	100.00%
Bootstrap support for E3WW58 as seed ortholog is 100%.
Bootstrap support for L0PDR2 as seed ortholog is 100%.

Group of orthologs #948. Best score 61 bits
Score difference with first non-orthologous sequence - A.darlingi:61 P.jiroveci:61

E3X9Z0              	100.00%		L0PET8              	100.00%
Bootstrap support for E3X9Z0 as seed ortholog is 100%.
Bootstrap support for L0PET8 as seed ortholog is 100%.

Group of orthologs #949. Best score 60 bits
Score difference with first non-orthologous sequence - A.darlingi:60 P.jiroveci:60

E3X924              	100.00%		L0PBY4              	100.00%
Bootstrap support for E3X924 as seed ortholog is 100%.
Bootstrap support for L0PBY4 as seed ortholog is 100%.

Group of orthologs #950. Best score 59 bits
Score difference with first non-orthologous sequence - A.darlingi:59 P.jiroveci:59

E3X0Q2              	100.00%		L0PAV7              	100.00%
                    	       		L0PBJ9              	100.00%
Bootstrap support for E3X0Q2 as seed ortholog is 100%.
Bootstrap support for L0PAV7 as seed ortholog is 100%.
Bootstrap support for L0PBJ9 as seed ortholog is 100%.

Group of orthologs #951. Best score 59 bits
Score difference with first non-orthologous sequence - A.darlingi:59 P.jiroveci:59

E3WT81              	100.00%		L0PBC9              	100.00%
Bootstrap support for E3WT81 as seed ortholog is 100%.
Bootstrap support for L0PBC9 as seed ortholog is 100%.

Group of orthologs #952. Best score 59 bits
Score difference with first non-orthologous sequence - A.darlingi:59 P.jiroveci:59

E3WUA2              	100.00%		L0PBR6              	100.00%
Bootstrap support for E3WUA2 as seed ortholog is 100%.
Bootstrap support for L0PBR6 as seed ortholog is 100%.

Group of orthologs #953. Best score 59 bits
Score difference with first non-orthologous sequence - A.darlingi:59 P.jiroveci:59

E3X4X5              	100.00%		L0PCM3              	100.00%
Bootstrap support for E3X4X5 as seed ortholog is 100%.
Bootstrap support for L0PCM3 as seed ortholog is 100%.

Group of orthologs #954. Best score 59 bits
Score difference with first non-orthologous sequence - A.darlingi:59 P.jiroveci:59

E3X4T7              	100.00%		L0PFK9              	100.00%
Bootstrap support for E3X4T7 as seed ortholog is 100%.
Bootstrap support for L0PFK9 as seed ortholog is 100%.

Group of orthologs #955. Best score 59 bits
Score difference with first non-orthologous sequence - A.darlingi:59 P.jiroveci:59

E3X5F7              	100.00%		L0PFM0              	100.00%
Bootstrap support for E3X5F7 as seed ortholog is 100%.
Bootstrap support for L0PFM0 as seed ortholog is 100%.

Group of orthologs #956. Best score 58 bits
Score difference with first non-orthologous sequence - A.darlingi:58 P.jiroveci:58

E3WME2              	100.00%		L0P9P1              	100.00%
Bootstrap support for E3WME2 as seed ortholog is 100%.
Bootstrap support for L0P9P1 as seed ortholog is 100%.

Group of orthologs #957. Best score 58 bits
Score difference with first non-orthologous sequence - A.darlingi:58 P.jiroveci:58

E3X2I9              	100.00%		L0PG94              	100.00%
Bootstrap support for E3X2I9 as seed ortholog is 100%.
Bootstrap support for L0PG94 as seed ortholog is 100%.

Group of orthologs #958. Best score 57 bits
Score difference with first non-orthologous sequence - A.darlingi:57 P.jiroveci:57

E3WMD5              	100.00%		L0PA11              	100.00%
Bootstrap support for E3WMD5 as seed ortholog is 100%.
Bootstrap support for L0PA11 as seed ortholog is 100%.

Group of orthologs #959. Best score 56 bits
Score difference with first non-orthologous sequence - A.darlingi:56 P.jiroveci:56

E3WNE8              	100.00%		L0PF02              	100.00%
Bootstrap support for E3WNE8 as seed ortholog is 100%.
Bootstrap support for L0PF02 as seed ortholog is 100%.

Group of orthologs #960. Best score 56 bits
Score difference with first non-orthologous sequence - A.darlingi:56 P.jiroveci:56

E3WPM5              	100.00%		L0PEA3              	100.00%
Bootstrap support for E3WPM5 as seed ortholog is 100%.
Bootstrap support for L0PEA3 as seed ortholog is 100%.

Group of orthologs #961. Best score 56 bits
Score difference with first non-orthologous sequence - A.darlingi:56 P.jiroveci:56

E3WUQ2              	100.00%		L0PAE6              	100.00%
Bootstrap support for E3WUQ2 as seed ortholog is 100%.
Bootstrap support for L0PAE6 as seed ortholog is 100%.

Group of orthologs #962. Best score 56 bits
Score difference with first non-orthologous sequence - A.darlingi:56 P.jiroveci:6

E3WS93              	100.00%		L0PDX9              	100.00%
Bootstrap support for E3WS93 as seed ortholog is 100%.
Bootstrap support for L0PDX9 as seed ortholog is 56%.
Alternative seed ortholog is L0P9M7 (6 bits away from this cluster)

Group of orthologs #963. Best score 56 bits
Score difference with first non-orthologous sequence - A.darlingi:56 P.jiroveci:56

E3X0H8              	100.00%		L0PDR4              	100.00%
Bootstrap support for E3X0H8 as seed ortholog is 100%.
Bootstrap support for L0PDR4 as seed ortholog is 100%.

Group of orthologs #964. Best score 56 bits
Score difference with first non-orthologous sequence - A.darlingi:56 P.jiroveci:56

E3XF02              	100.00%		L0PDW6              	100.00%
Bootstrap support for E3XF02 as seed ortholog is 100%.
Bootstrap support for L0PDW6 as seed ortholog is 100%.

Group of orthologs #965. Best score 55 bits
Score difference with first non-orthologous sequence - A.darlingi:55 P.jiroveci:55

E3WVS6              	100.00%		L0PEH2              	100.00%
E3WTH7              	15.17%		
E3XE63              	14.52%		
E3XE64              	13.00%		
E3WVS5              	11.48%		
E3WLG4              	8.99%		
E3XAJ0              	5.63%		
Bootstrap support for E3WVS6 as seed ortholog is 100%.
Bootstrap support for L0PEH2 as seed ortholog is 100%.

Group of orthologs #966. Best score 55 bits
Score difference with first non-orthologous sequence - A.darlingi:55 P.jiroveci:55

E3X1N0              	100.00%		L0PAW3              	100.00%
Bootstrap support for E3X1N0 as seed ortholog is 100%.
Bootstrap support for L0PAW3 as seed ortholog is 100%.

Group of orthologs #967. Best score 54 bits
Score difference with first non-orthologous sequence - A.darlingi:54 P.jiroveci:54

E3XE62              	100.00%		L0PB91              	100.00%
E3WLC0              	64.16%		
Bootstrap support for E3XE62 as seed ortholog is 100%.
Bootstrap support for L0PB91 as seed ortholog is 100%.

Group of orthologs #968. Best score 54 bits
Score difference with first non-orthologous sequence - A.darlingi:54 P.jiroveci:54

E3WSM4              	100.00%		L0PBB5              	100.00%
Bootstrap support for E3WSM4 as seed ortholog is 100%.
Bootstrap support for L0PBB5 as seed ortholog is 100%.

Group of orthologs #969. Best score 54 bits
Score difference with first non-orthologous sequence - A.darlingi:54 P.jiroveci:54

E3XE78              	100.00%		L0P9V3              	100.00%
Bootstrap support for E3XE78 as seed ortholog is 100%.
Bootstrap support for L0P9V3 as seed ortholog is 100%.

Group of orthologs #970. Best score 53 bits
Score difference with first non-orthologous sequence - A.darlingi:53 P.jiroveci:53

E3WYR3              	100.00%		L0P963              	100.00%
Bootstrap support for E3WYR3 as seed ortholog is 100%.
Bootstrap support for L0P963 as seed ortholog is 100%.

Group of orthologs #971. Best score 53 bits
Score difference with first non-orthologous sequence - A.darlingi:53 P.jiroveci:53

E3X648              	100.00%		L0PA03              	100.00%
Bootstrap support for E3X648 as seed ortholog is 100%.
Bootstrap support for L0PA03 as seed ortholog is 100%.

Group of orthologs #972. Best score 53 bits
Score difference with first non-orthologous sequence - A.darlingi:53 P.jiroveci:53

E3X7D2              	100.00%		L0PHM6              	100.00%
Bootstrap support for E3X7D2 as seed ortholog is 100%.
Bootstrap support for L0PHM6 as seed ortholog is 100%.

Group of orthologs #973. Best score 52 bits
Score difference with first non-orthologous sequence - A.darlingi:52 P.jiroveci:52

E3WKC2              	100.00%		L0PAD6              	100.00%
Bootstrap support for E3WKC2 as seed ortholog is 100%.
Bootstrap support for L0PAD6 as seed ortholog is 100%.

Group of orthologs #974. Best score 52 bits
Score difference with first non-orthologous sequence - A.darlingi:52 P.jiroveci:52

E3XDS4              	100.00%		L0PGX1              	100.00%
Bootstrap support for E3XDS4 as seed ortholog is 100%.
Bootstrap support for L0PGX1 as seed ortholog is 100%.

Group of orthologs #975. Best score 51 bits
Score difference with first non-orthologous sequence - A.darlingi:51 P.jiroveci:51

E3WXY6              	100.00%		L0PBX4              	100.00%
Bootstrap support for E3WXY6 as seed ortholog is 100%.
Bootstrap support for L0PBX4 as seed ortholog is 100%.

Group of orthologs #976. Best score 51 bits
Score difference with first non-orthologous sequence - A.darlingi:51 P.jiroveci:51

E3X1S8              	100.00%		L0P933              	100.00%
Bootstrap support for E3X1S8 as seed ortholog is 100%.
Bootstrap support for L0P933 as seed ortholog is 100%.

Group of orthologs #977. Best score 51 bits
Score difference with first non-orthologous sequence - A.darlingi:4 P.jiroveci:51

E3XFX6              	100.00%		L0P8Q3              	100.00%
Bootstrap support for E3XFX6 as seed ortholog is 54%.
Alternative seed ortholog is E3X3Y7 (4 bits away from this cluster)
Bootstrap support for L0P8Q3 as seed ortholog is 100%.

Group of orthologs #978. Best score 50 bits
Score difference with first non-orthologous sequence - A.darlingi:50 P.jiroveci:50

E3X708              	100.00%		L0PG69              	100.00%
E3XF17              	10.24%		
E3XF19              	9.63%		
E3WTE8              	8.66%		
E3XF24              	7.07%		
E3XF22              	6.59%		
E3WS87              	5.73%		
E3WV97              	5.49%		
Bootstrap support for E3X708 as seed ortholog is 100%.
Bootstrap support for L0PG69 as seed ortholog is 100%.

Group of orthologs #979. Best score 50 bits
Score difference with first non-orthologous sequence - A.darlingi:50 P.jiroveci:8

E3WK15              	100.00%		L0P878              	100.00%
Bootstrap support for E3WK15 as seed ortholog is 100%.
Bootstrap support for L0P878 as seed ortholog is 65%.
Alternative seed ortholog is L0P9B0 (8 bits away from this cluster)

Group of orthologs #980. Best score 50 bits
Score difference with first non-orthologous sequence - A.darlingi:50 P.jiroveci:50

E3WNR3              	100.00%		L0PFN8              	100.00%
Bootstrap support for E3WNR3 as seed ortholog is 100%.
Bootstrap support for L0PFN8 as seed ortholog is 100%.

Group of orthologs #981. Best score 50 bits
Score difference with first non-orthologous sequence - A.darlingi:50 P.jiroveci:50

E3WYV6              	100.00%		L0PFE5              	100.00%
Bootstrap support for E3WYV6 as seed ortholog is 100%.
Bootstrap support for L0PFE5 as seed ortholog is 100%.

Group of orthologs #982. Best score 50 bits
Score difference with first non-orthologous sequence - A.darlingi:50 P.jiroveci:50

E3X5K7              	100.00%		L0PEH0              	100.00%
Bootstrap support for E3X5K7 as seed ortholog is 100%.
Bootstrap support for L0PEH0 as seed ortholog is 100%.

Group of orthologs #983. Best score 50 bits
Score difference with first non-orthologous sequence - A.darlingi:50 P.jiroveci:50

E3XCX7              	100.00%		L0P7S0              	100.00%
Bootstrap support for E3XCX7 as seed ortholog is 100%.
Bootstrap support for L0P7S0 as seed ortholog is 100%.

Group of orthologs #984. Best score 49 bits
Score difference with first non-orthologous sequence - A.darlingi:49 P.jiroveci:49

E3WN60              	100.00%		L0PAV1              	100.00%
Bootstrap support for E3WN60 as seed ortholog is 100%.
Bootstrap support for L0PAV1 as seed ortholog is 100%.

Group of orthologs #985. Best score 49 bits
Score difference with first non-orthologous sequence - A.darlingi:49 P.jiroveci:49

E3X2U5              	100.00%		L0P9E6              	100.00%
Bootstrap support for E3X2U5 as seed ortholog is 100%.
Bootstrap support for L0P9E6 as seed ortholog is 100%.

Group of orthologs #986. Best score 48 bits
Score difference with first non-orthologous sequence - A.darlingi:48 P.jiroveci:48

E3WXJ0              	100.00%		L0P858              	100.00%
                    	       		L0PDX5              	74.11%
Bootstrap support for E3WXJ0 as seed ortholog is 100%.
Bootstrap support for L0P858 as seed ortholog is 100%.

Group of orthologs #987. Best score 47 bits
Score difference with first non-orthologous sequence - A.darlingi:47 P.jiroveci:47

E3XCY5              	100.00%		L0PAG5              	100.00%
Bootstrap support for E3XCY5 as seed ortholog is 100%.
Bootstrap support for L0PAG5 as seed ortholog is 100%.

Group of orthologs #988. Best score 45 bits
Score difference with first non-orthologous sequence - A.darlingi:45 P.jiroveci:45

E3WXY0              	100.00%		L0PBN3              	100.00%
Bootstrap support for E3WXY0 as seed ortholog is 100%.
Bootstrap support for L0PBN3 as seed ortholog is 100%.

Group of orthologs #989. Best score 44 bits
Score difference with first non-orthologous sequence - A.darlingi:44 P.jiroveci:44

E3WUX2              	100.00%		L0P9U7              	100.00%
Bootstrap support for E3WUX2 as seed ortholog is 100%.
Bootstrap support for L0P9U7 as seed ortholog is 100%.

Group of orthologs #990. Best score 44 bits
Score difference with first non-orthologous sequence - A.darlingi:44 P.jiroveci:44

E3WUI2              	100.00%		L0PDC2              	100.00%
Bootstrap support for E3WUI2 as seed ortholog is 100%.
Bootstrap support for L0PDC2 as seed ortholog is 100%.

Group of orthologs #991. Best score 43 bits
Score difference with first non-orthologous sequence - A.darlingi:43 P.jiroveci:43

E3X2X0              	100.00%		L0PGU4              	100.00%
Bootstrap support for E3X2X0 as seed ortholog is 100%.
Bootstrap support for L0PGU4 as seed ortholog is 100%.

Group of orthologs #992. Best score 42 bits
Score difference with first non-orthologous sequence - A.darlingi:42 P.jiroveci:42

E3XCL5              	100.00%		L0PD87              	100.00%
Bootstrap support for E3XCL5 as seed ortholog is 100%.
Bootstrap support for L0PD87 as seed ortholog is 100%.

Group of orthologs #993. Best score 41 bits
Score difference with first non-orthologous sequence - A.darlingi:41 P.jiroveci:41

E3WVT3              	100.00%		L0PGY1              	100.00%
Bootstrap support for E3WVT3 as seed ortholog is 100%.
Bootstrap support for L0PGY1 as seed ortholog is 100%.

Group of orthologs #994. Best score 41 bits
Score difference with first non-orthologous sequence - A.darlingi:41 P.jiroveci:41

E3XEH4              	100.00%		L0P724              	100.00%
Bootstrap support for E3XEH4 as seed ortholog is 100%.
Bootstrap support for L0P724 as seed ortholog is 100%.

Group of orthologs #995. Best score 40 bits
Score difference with first non-orthologous sequence - A.darlingi:40 P.jiroveci:40

E3WXW0              	100.00%		L0PC15              	100.00%
E3WXV9              	62.03%		
E3WYU3              	6.08%		
Bootstrap support for E3WXW0 as seed ortholog is 100%.
Bootstrap support for L0PC15 as seed ortholog is 100%.

Group of orthologs #996. Best score 40 bits
Score difference with first non-orthologous sequence - A.darlingi:40 P.jiroveci:40

E3X2H5              	100.00%		L0PC31              	100.00%
                    	       		L0PGG5              	100.00%
Bootstrap support for E3X2H5 as seed ortholog is 100%.
Bootstrap support for L0PC31 as seed ortholog is 100%.
Bootstrap support for L0PGG5 as seed ortholog is 100%.