###################################
1430 groups of orthologs
2335 in-paralogs from A.carolinensis
1511 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
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Group of orthologs #1. Best score 3735 bits
Score difference with first non-orthologous sequence - A.carolinensis:2466 P.jiroveci:3735

H9G3B2              	100.00%		L0PGR1              	100.00%
Bootstrap support for H9G3B2 as seed ortholog is 100%.
Bootstrap support for L0PGR1 as seed ortholog is 100%.

Group of orthologs #2. Best score 3062 bits
Score difference with first non-orthologous sequence - A.carolinensis:3062 P.jiroveci:3062

H9GLH2              	100.00%		L0PCQ0              	100.00%
Bootstrap support for H9GLH2 as seed ortholog is 100%.
Bootstrap support for L0PCQ0 as seed ortholog is 100%.

Group of orthologs #3. Best score 1984 bits
Score difference with first non-orthologous sequence - A.carolinensis:1984 P.jiroveci:1984

H9GLG5              	100.00%		L0PB90              	100.00%
Bootstrap support for H9GLG5 as seed ortholog is 100%.
Bootstrap support for L0PB90 as seed ortholog is 100%.

Group of orthologs #4. Best score 1837 bits
Score difference with first non-orthologous sequence - A.carolinensis:1837 P.jiroveci:1837

H9GJ88              	100.00%		L0PBF5              	100.00%
H9G6C1              	34.83%		
Bootstrap support for H9GJ88 as seed ortholog is 100%.
Bootstrap support for L0PBF5 as seed ortholog is 100%.

Group of orthologs #5. Best score 1828 bits
Score difference with first non-orthologous sequence - A.carolinensis:1828 P.jiroveci:1828

G1KPU9              	100.00%		L0PEL4              	100.00%
Bootstrap support for G1KPU9 as seed ortholog is 100%.
Bootstrap support for L0PEL4 as seed ortholog is 100%.

Group of orthologs #6. Best score 1757 bits
Score difference with first non-orthologous sequence - A.carolinensis:1757 P.jiroveci:780

H9G3S7              	100.00%		L0PHB1              	100.00%
Bootstrap support for H9G3S7 as seed ortholog is 100%.
Bootstrap support for L0PHB1 as seed ortholog is 100%.

Group of orthologs #7. Best score 1693 bits
Score difference with first non-orthologous sequence - A.carolinensis:1693 P.jiroveci:1693

G1KIU6              	100.00%		L0PGI2              	100.00%
H9G678              	7.00%		
Bootstrap support for G1KIU6 as seed ortholog is 100%.
Bootstrap support for L0PGI2 as seed ortholog is 100%.

Group of orthologs #8. Best score 1693 bits
Score difference with first non-orthologous sequence - A.carolinensis:1693 P.jiroveci:1693

H9GGK2              	100.00%		L0PGJ4              	100.00%
Bootstrap support for H9GGK2 as seed ortholog is 100%.
Bootstrap support for L0PGJ4 as seed ortholog is 100%.

Group of orthologs #9. Best score 1420 bits
Score difference with first non-orthologous sequence - A.carolinensis:686 P.jiroveci:1420

G1KR53              	100.00%		L0PG77              	100.00%
Bootstrap support for G1KR53 as seed ortholog is 100%.
Bootstrap support for L0PG77 as seed ortholog is 100%.

Group of orthologs #10. Best score 1418 bits
Score difference with first non-orthologous sequence - A.carolinensis:1418 P.jiroveci:1418

H9GN15              	100.00%		L0PFL5              	100.00%
Bootstrap support for H9GN15 as seed ortholog is 100%.
Bootstrap support for L0PFL5 as seed ortholog is 100%.

Group of orthologs #11. Best score 1339 bits
Score difference with first non-orthologous sequence - A.carolinensis:1339 P.jiroveci:1339

H9GFG8              	100.00%		L0PG53              	100.00%
Bootstrap support for H9GFG8 as seed ortholog is 100%.
Bootstrap support for L0PG53 as seed ortholog is 100%.

Group of orthologs #12. Best score 1314 bits
Score difference with first non-orthologous sequence - A.carolinensis:1314 P.jiroveci:1314

H9G3T4              	100.00%		L0PEQ1              	100.00%
Bootstrap support for H9G3T4 as seed ortholog is 100%.
Bootstrap support for L0PEQ1 as seed ortholog is 100%.

Group of orthologs #13. Best score 1287 bits
Score difference with first non-orthologous sequence - A.carolinensis:1287 P.jiroveci:1287

H9G5S6              	100.00%		L0PCG8              	100.00%
Bootstrap support for H9G5S6 as seed ortholog is 100%.
Bootstrap support for L0PCG8 as seed ortholog is 100%.

Group of orthologs #14. Best score 1233 bits
Score difference with first non-orthologous sequence - A.carolinensis:1164 P.jiroveci:1233

H9G6E3              	100.00%		L0PFU4              	100.00%
Bootstrap support for H9G6E3 as seed ortholog is 100%.
Bootstrap support for L0PFU4 as seed ortholog is 100%.

Group of orthologs #15. Best score 1230 bits
Score difference with first non-orthologous sequence - A.carolinensis:1230 P.jiroveci:1230

H9GDF6              	100.00%		L0PB43              	100.00%
Bootstrap support for H9GDF6 as seed ortholog is 100%.
Bootstrap support for L0PB43 as seed ortholog is 100%.

Group of orthologs #16. Best score 1189 bits
Score difference with first non-orthologous sequence - A.carolinensis:1189 P.jiroveci:1189

H9GEY4              	100.00%		L0P818              	100.00%
G1KAM2              	40.04%		
Bootstrap support for H9GEY4 as seed ortholog is 100%.
Bootstrap support for L0P818 as seed ortholog is 100%.

Group of orthologs #17. Best score 1175 bits
Score difference with first non-orthologous sequence - A.carolinensis:568 P.jiroveci:1175

G1KQY4              	100.00%		L0PEW0              	100.00%
Bootstrap support for G1KQY4 as seed ortholog is 100%.
Bootstrap support for L0PEW0 as seed ortholog is 100%.

Group of orthologs #18. Best score 1164 bits
Score difference with first non-orthologous sequence - A.carolinensis:1164 P.jiroveci:1164

G1KH37              	100.00%		L0PBE4              	100.00%
Bootstrap support for G1KH37 as seed ortholog is 100%.
Bootstrap support for L0PBE4 as seed ortholog is 100%.

Group of orthologs #19. Best score 1144 bits
Score difference with first non-orthologous sequence - A.carolinensis:1144 P.jiroveci:1144

G1KXJ4              	100.00%		L0PDK3              	100.00%
Bootstrap support for G1KXJ4 as seed ortholog is 100%.
Bootstrap support for L0PDK3 as seed ortholog is 100%.

Group of orthologs #20. Best score 1138 bits
Score difference with first non-orthologous sequence - A.carolinensis:1138 P.jiroveci:1138

G1KK90              	100.00%		L0P7C3              	100.00%
Bootstrap support for G1KK90 as seed ortholog is 100%.
Bootstrap support for L0P7C3 as seed ortholog is 100%.

Group of orthologs #21. Best score 1135 bits
Score difference with first non-orthologous sequence - A.carolinensis:1135 P.jiroveci:1135

H9G776              	100.00%		L0PBY6              	100.00%
Bootstrap support for H9G776 as seed ortholog is 100%.
Bootstrap support for L0PBY6 as seed ortholog is 100%.

Group of orthologs #22. Best score 1069 bits
Score difference with first non-orthologous sequence - A.carolinensis:279 P.jiroveci:1069

G1KE14              	100.00%		L0PCK0              	100.00%
                    	       		L0P7U1              	99.05%
Bootstrap support for G1KE14 as seed ortholog is 99%.
Bootstrap support for L0PCK0 as seed ortholog is 100%.

Group of orthologs #23. Best score 1065 bits
Score difference with first non-orthologous sequence - A.carolinensis:674 P.jiroveci:624

G1KBM0              	100.00%		L0PG21              	100.00%
H9GHV8              	75.34%		
Bootstrap support for G1KBM0 as seed ortholog is 100%.
Bootstrap support for L0PG21 as seed ortholog is 100%.

Group of orthologs #24. Best score 1031 bits
Score difference with first non-orthologous sequence - A.carolinensis:1031 P.jiroveci:1031

G1KCW2              	100.00%		L0P7P6              	100.00%
Bootstrap support for G1KCW2 as seed ortholog is 100%.
Bootstrap support for L0P7P6 as seed ortholog is 100%.

Group of orthologs #25. Best score 969 bits
Score difference with first non-orthologous sequence - A.carolinensis:278 P.jiroveci:969

G1KGP8              	100.00%		L0PG61              	100.00%
Bootstrap support for G1KGP8 as seed ortholog is 99%.
Bootstrap support for L0PG61 as seed ortholog is 100%.

Group of orthologs #26. Best score 966 bits
Score difference with first non-orthologous sequence - A.carolinensis:966 P.jiroveci:966

H9GB84              	100.00%		L0P9F0              	100.00%
Bootstrap support for H9GB84 as seed ortholog is 100%.
Bootstrap support for L0P9F0 as seed ortholog is 100%.

Group of orthologs #27. Best score 963 bits
Score difference with first non-orthologous sequence - A.carolinensis:537 P.jiroveci:881

G1K8V7              	100.00%		L0PAG9              	100.00%
H9GJJ3              	52.88%		
Bootstrap support for G1K8V7 as seed ortholog is 100%.
Bootstrap support for L0PAG9 as seed ortholog is 100%.

Group of orthologs #28. Best score 962 bits
Score difference with first non-orthologous sequence - A.carolinensis:259 P.jiroveci:748

H9G9N5              	100.00%		L0PEK6              	100.00%
G1KRK2              	43.13%		
Bootstrap support for H9G9N5 as seed ortholog is 100%.
Bootstrap support for L0PEK6 as seed ortholog is 100%.

Group of orthologs #29. Best score 958 bits
Score difference with first non-orthologous sequence - A.carolinensis:793 P.jiroveci:958

G1KD44              	100.00%		L0PFN4              	100.00%
Bootstrap support for G1KD44 as seed ortholog is 100%.
Bootstrap support for L0PFN4 as seed ortholog is 100%.

Group of orthologs #30. Best score 947 bits
Score difference with first non-orthologous sequence - A.carolinensis:500 P.jiroveci:947

G1KU94              	100.00%		L0PDI4              	100.00%
H9GMI6              	70.84%		
G1KSP5              	69.79%		
L7MZS4              	15.91%		
L7MZQ6              	15.74%		
L7N034              	15.19%		
G1KTX1              	14.88%		
H9GJ77              	14.13%		
G1KIW2              	10.73%		
G1KH46              	10.49%		
Bootstrap support for G1KU94 as seed ortholog is 100%.
Bootstrap support for L0PDI4 as seed ortholog is 100%.

Group of orthologs #31. Best score 942 bits
Score difference with first non-orthologous sequence - A.carolinensis:942 P.jiroveci:942

H9GKR3              	100.00%		L0P915              	100.00%
Bootstrap support for H9GKR3 as seed ortholog is 100%.
Bootstrap support for L0P915 as seed ortholog is 100%.

Group of orthologs #32. Best score 937 bits
Score difference with first non-orthologous sequence - A.carolinensis:247 P.jiroveci:469

H9GDL8              	100.00%		L0PB13              	100.00%
Bootstrap support for H9GDL8 as seed ortholog is 99%.
Bootstrap support for L0PB13 as seed ortholog is 100%.

Group of orthologs #33. Best score 930 bits
Score difference with first non-orthologous sequence - A.carolinensis:930 P.jiroveci:638

G1KBX2              	100.00%		L0P7V0              	100.00%
Bootstrap support for G1KBX2 as seed ortholog is 100%.
Bootstrap support for L0P7V0 as seed ortholog is 100%.

Group of orthologs #34. Best score 907 bits
Score difference with first non-orthologous sequence - A.carolinensis:907 P.jiroveci:907

G1KCY0              	100.00%		L0PAK7              	100.00%
                    	       		L0P8F2              	66.72%
Bootstrap support for G1KCY0 as seed ortholog is 100%.
Bootstrap support for L0PAK7 as seed ortholog is 100%.

Group of orthologs #35. Best score 887 bits
Score difference with first non-orthologous sequence - A.carolinensis:228 P.jiroveci:373

G1K8N6              	100.00%		L0PFC8              	100.00%
Bootstrap support for G1K8N6 as seed ortholog is 100%.
Bootstrap support for L0PFC8 as seed ortholog is 100%.

Group of orthologs #36. Best score 883 bits
Score difference with first non-orthologous sequence - A.carolinensis:883 P.jiroveci:883

G1KCM2              	100.00%		L0PG12              	100.00%
Bootstrap support for G1KCM2 as seed ortholog is 100%.
Bootstrap support for L0PG12 as seed ortholog is 100%.

Group of orthologs #37. Best score 871 bits
Score difference with first non-orthologous sequence - A.carolinensis:871 P.jiroveci:871

G1KJ75              	100.00%		L0P9H4              	100.00%
Bootstrap support for G1KJ75 as seed ortholog is 100%.
Bootstrap support for L0P9H4 as seed ortholog is 100%.

Group of orthologs #38. Best score 865 bits
Score difference with first non-orthologous sequence - A.carolinensis:865 P.jiroveci:865

H9G6H3              	100.00%		L0PCC4              	100.00%
Bootstrap support for H9G6H3 as seed ortholog is 100%.
Bootstrap support for L0PCC4 as seed ortholog is 100%.

Group of orthologs #39. Best score 860 bits
Score difference with first non-orthologous sequence - A.carolinensis:242 P.jiroveci:860

H9G3B6              	100.00%		L0PAW9              	100.00%
G1KQE0              	31.01%		L0PBZ0              	72.59%
Bootstrap support for H9G3B6 as seed ortholog is 100%.
Bootstrap support for L0PAW9 as seed ortholog is 100%.

Group of orthologs #40. Best score 860 bits
Score difference with first non-orthologous sequence - A.carolinensis:860 P.jiroveci:860

G1KFI2              	100.00%		L0PAN4              	100.00%
Bootstrap support for G1KFI2 as seed ortholog is 100%.
Bootstrap support for L0PAN4 as seed ortholog is 100%.

Group of orthologs #41. Best score 854 bits
Score difference with first non-orthologous sequence - A.carolinensis:109 P.jiroveci:358

G1KKU7              	100.00%		L0PAJ7              	100.00%
Bootstrap support for G1KKU7 as seed ortholog is 99%.
Bootstrap support for L0PAJ7 as seed ortholog is 100%.

Group of orthologs #42. Best score 853 bits
Score difference with first non-orthologous sequence - A.carolinensis:729 P.jiroveci:607

H9GN00              	100.00%		L0PCW9              	100.00%
H9GAI7              	66.37%		
Bootstrap support for H9GN00 as seed ortholog is 100%.
Bootstrap support for L0PCW9 as seed ortholog is 100%.

Group of orthologs #43. Best score 849 bits
Score difference with first non-orthologous sequence - A.carolinensis:276 P.jiroveci:849

H9G5M3              	100.00%		L0PFQ2              	100.00%
H9GM16              	66.35%		L0PGR4              	100.00%
Bootstrap support for H9G5M3 as seed ortholog is 99%.
Bootstrap support for L0PFQ2 as seed ortholog is 100%.
Bootstrap support for L0PGR4 as seed ortholog is 100%.

Group of orthologs #44. Best score 847 bits
Score difference with first non-orthologous sequence - A.carolinensis:371 P.jiroveci:692

G1KRX3              	100.00%		L0PFS2              	100.00%
Bootstrap support for G1KRX3 as seed ortholog is 100%.
Bootstrap support for L0PFS2 as seed ortholog is 100%.

Group of orthologs #45. Best score 841 bits
Score difference with first non-orthologous sequence - A.carolinensis:481 P.jiroveci:347

G1KC44              	100.00%		L0PGL4              	100.00%
                    	       		L0P7Q7              	24.17%
Bootstrap support for G1KC44 as seed ortholog is 100%.
Bootstrap support for L0PGL4 as seed ortholog is 100%.

Group of orthologs #46. Best score 838 bits
Score difference with first non-orthologous sequence - A.carolinensis:170 P.jiroveci:838

H9G6Z3              	100.00%		L0PDQ4              	100.00%
Bootstrap support for H9G6Z3 as seed ortholog is 99%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #47. Best score 834 bits
Score difference with first non-orthologous sequence - A.carolinensis:834 P.jiroveci:834

G1KBY6              	100.00%		L0PDF1              	100.00%
Bootstrap support for G1KBY6 as seed ortholog is 100%.
Bootstrap support for L0PDF1 as seed ortholog is 100%.

Group of orthologs #48. Best score 829 bits
Score difference with first non-orthologous sequence - A.carolinensis:829 P.jiroveci:829

G1KJ76              	100.00%		L0PBD7              	100.00%
H9G7Y0              	77.05%		
Bootstrap support for G1KJ76 as seed ortholog is 100%.
Bootstrap support for L0PBD7 as seed ortholog is 100%.

Group of orthologs #49. Best score 829 bits
Score difference with first non-orthologous sequence - A.carolinensis:829 P.jiroveci:829

G1KTI3              	100.00%		L0PAV3              	100.00%
Bootstrap support for G1KTI3 as seed ortholog is 100%.
Bootstrap support for L0PAV3 as seed ortholog is 100%.

Group of orthologs #50. Best score 824 bits
Score difference with first non-orthologous sequence - A.carolinensis:824 P.jiroveci:659

G1KJ05              	100.00%		L0PBQ6              	100.00%
Bootstrap support for G1KJ05 as seed ortholog is 100%.
Bootstrap support for L0PBQ6 as seed ortholog is 100%.

Group of orthologs #51. Best score 821 bits
Score difference with first non-orthologous sequence - A.carolinensis:173 P.jiroveci:623

H9G8M3              	100.00%		L0PFV0              	100.00%
Bootstrap support for H9G8M3 as seed ortholog is 99%.
Bootstrap support for L0PFV0 as seed ortholog is 100%.

Group of orthologs #52. Best score 811 bits
Score difference with first non-orthologous sequence - A.carolinensis:811 P.jiroveci:811

H9G8G2              	100.00%		L0PC43              	100.00%
                    	       		L0PCW3              	45.42%
Bootstrap support for H9G8G2 as seed ortholog is 100%.
Bootstrap support for L0PC43 as seed ortholog is 100%.

Group of orthologs #53. Best score 808 bits
Score difference with first non-orthologous sequence - A.carolinensis:808 P.jiroveci:808

G1K915              	100.00%		L0PE96              	100.00%
Bootstrap support for G1K915 as seed ortholog is 100%.
Bootstrap support for L0PE96 as seed ortholog is 100%.

Group of orthologs #54. Best score 808 bits
Score difference with first non-orthologous sequence - A.carolinensis:689 P.jiroveci:808

H9GJG9              	100.00%		L0PGL8              	100.00%
Bootstrap support for H9GJG9 as seed ortholog is 100%.
Bootstrap support for L0PGL8 as seed ortholog is 100%.

Group of orthologs #55. Best score 802 bits
Score difference with first non-orthologous sequence - A.carolinensis:802 P.jiroveci:802

G1KS74              	100.00%		L0PEU6              	100.00%
G1KSI7              	66.95%		
Bootstrap support for G1KS74 as seed ortholog is 100%.
Bootstrap support for L0PEU6 as seed ortholog is 100%.

Group of orthologs #56. Best score 799 bits
Score difference with first non-orthologous sequence - A.carolinensis:799 P.jiroveci:799

H9GBY4              	100.00%		L0PH89              	100.00%
Bootstrap support for H9GBY4 as seed ortholog is 100%.
Bootstrap support for L0PH89 as seed ortholog is 100%.

Group of orthologs #57. Best score 798 bits
Score difference with first non-orthologous sequence - A.carolinensis:798 P.jiroveci:798

G1KRH8              	100.00%		L0PC93              	100.00%
Bootstrap support for G1KRH8 as seed ortholog is 100%.
Bootstrap support for L0PC93 as seed ortholog is 100%.

Group of orthologs #58. Best score 795 bits
Score difference with first non-orthologous sequence - A.carolinensis:795 P.jiroveci:795

H9GK16              	100.00%		L0PC54              	100.00%
Bootstrap support for H9GK16 as seed ortholog is 100%.
Bootstrap support for L0PC54 as seed ortholog is 100%.

Group of orthologs #59. Best score 791 bits
Score difference with first non-orthologous sequence - A.carolinensis:791 P.jiroveci:791

G1KM74              	100.00%		L0PAP2              	100.00%
Bootstrap support for G1KM74 as seed ortholog is 100%.
Bootstrap support for L0PAP2 as seed ortholog is 100%.

Group of orthologs #60. Best score 785 bits
Score difference with first non-orthologous sequence - A.carolinensis:785 P.jiroveci:185

G1KUT8              	100.00%		L0PDB3              	100.00%
Bootstrap support for G1KUT8 as seed ortholog is 100%.
Bootstrap support for L0PDB3 as seed ortholog is 99%.

Group of orthologs #61. Best score 785 bits
Score difference with first non-orthologous sequence - A.carolinensis:785 P.jiroveci:785

H9GFX2              	100.00%		L0P7X5              	100.00%
Bootstrap support for H9GFX2 as seed ortholog is 100%.
Bootstrap support for L0P7X5 as seed ortholog is 100%.

Group of orthologs #62. Best score 783 bits
Score difference with first non-orthologous sequence - A.carolinensis:698 P.jiroveci:783

H9G990              	100.00%		L0PBA5              	100.00%
G1KEW8              	60.54%		
Bootstrap support for H9G990 as seed ortholog is 100%.
Bootstrap support for L0PBA5 as seed ortholog is 100%.

Group of orthologs #63. Best score 779 bits
Score difference with first non-orthologous sequence - A.carolinensis:779 P.jiroveci:779

G1KDG4              	100.00%		L0P710              	100.00%
Bootstrap support for G1KDG4 as seed ortholog is 100%.
Bootstrap support for L0P710 as seed ortholog is 100%.

Group of orthologs #64. Best score 779 bits
Score difference with first non-orthologous sequence - A.carolinensis:688 P.jiroveci:779

G1KDZ0              	100.00%		L0P7V1              	100.00%
Bootstrap support for G1KDZ0 as seed ortholog is 100%.
Bootstrap support for L0P7V1 as seed ortholog is 100%.

Group of orthologs #65. Best score 777 bits
Score difference with first non-orthologous sequence - A.carolinensis:777 P.jiroveci:777

H9GGR8              	100.00%		L0PFF9              	100.00%
Bootstrap support for H9GGR8 as seed ortholog is 100%.
Bootstrap support for L0PFF9 as seed ortholog is 100%.

Group of orthologs #66. Best score 771 bits
Score difference with first non-orthologous sequence - A.carolinensis:771 P.jiroveci:771

G1KUF6              	100.00%		L0PBF3              	100.00%
Bootstrap support for G1KUF6 as seed ortholog is 100%.
Bootstrap support for L0PBF3 as seed ortholog is 100%.

Group of orthologs #67. Best score 766 bits
Score difference with first non-orthologous sequence - A.carolinensis:766 P.jiroveci:299

G1KMR9              	100.00%		L0P833              	100.00%
Bootstrap support for G1KMR9 as seed ortholog is 100%.
Bootstrap support for L0P833 as seed ortholog is 100%.

Group of orthologs #68. Best score 765 bits
Score difference with first non-orthologous sequence - A.carolinensis:626 P.jiroveci:765

G1KG91              	100.00%		L0PBL6              	100.00%
Bootstrap support for G1KG91 as seed ortholog is 100%.
Bootstrap support for L0PBL6 as seed ortholog is 100%.

Group of orthologs #69. Best score 764 bits
Score difference with first non-orthologous sequence - A.carolinensis:670 P.jiroveci:764

H9GJ08              	100.00%		L0P9R9              	100.00%
Bootstrap support for H9GJ08 as seed ortholog is 100%.
Bootstrap support for L0P9R9 as seed ortholog is 100%.

Group of orthologs #70. Best score 760 bits
Score difference with first non-orthologous sequence - A.carolinensis:760 P.jiroveci:760

G1KGN1              	100.00%		L0PA62              	100.00%
Bootstrap support for G1KGN1 as seed ortholog is 100%.
Bootstrap support for L0PA62 as seed ortholog is 100%.

Group of orthologs #71. Best score 759 bits
Score difference with first non-orthologous sequence - A.carolinensis:759 P.jiroveci:759

G1KRU6              	100.00%		L0PF68              	100.00%
Bootstrap support for G1KRU6 as seed ortholog is 100%.
Bootstrap support for L0PF68 as seed ortholog is 100%.

Group of orthologs #72. Best score 750 bits
Score difference with first non-orthologous sequence - A.carolinensis:750 P.jiroveci:750

H9G5H0              	100.00%		L0P9W2              	100.00%
Bootstrap support for H9G5H0 as seed ortholog is 100%.
Bootstrap support for L0P9W2 as seed ortholog is 100%.

Group of orthologs #73. Best score 749 bits
Score difference with first non-orthologous sequence - A.carolinensis:108 P.jiroveci:749

H9GB68              	100.00%		L0PAC9              	100.00%
G1KLR7              	22.12%		
H9GC97              	15.78%		
Bootstrap support for H9GB68 as seed ortholog is 65%.
Alternative seed ortholog is H9GFQ2 (108 bits away from this cluster)
Bootstrap support for L0PAC9 as seed ortholog is 100%.

Group of orthologs #74. Best score 748 bits
Score difference with first non-orthologous sequence - A.carolinensis:400 P.jiroveci:748

G1KQV3              	100.00%		L0PBR4              	100.00%
L7MZZ9              	100.00%		
H9GPI3              	90.68%		
H9GP30              	90.06%		
H9GPI6              	83.85%		
H9G4P7              	12.94%		
Bootstrap support for G1KQV3 as seed ortholog is 100%.
Bootstrap support for L7MZZ9 as seed ortholog is 100%.
Bootstrap support for L0PBR4 as seed ortholog is 100%.

Group of orthologs #75. Best score 747 bits
Score difference with first non-orthologous sequence - A.carolinensis:747 P.jiroveci:747

H9G3B3              	100.00%		L0PFJ0              	100.00%
G1KPY4              	17.72%		
Bootstrap support for H9G3B3 as seed ortholog is 100%.
Bootstrap support for L0PFJ0 as seed ortholog is 100%.

Group of orthologs #76. Best score 745 bits
Score difference with first non-orthologous sequence - A.carolinensis:745 P.jiroveci:668

G1KHM5              	100.00%		L0PA93              	100.00%
Bootstrap support for G1KHM5 as seed ortholog is 100%.
Bootstrap support for L0PA93 as seed ortholog is 100%.

Group of orthologs #77. Best score 739 bits
Score difference with first non-orthologous sequence - A.carolinensis:739 P.jiroveci:739

H9G5G7              	100.00%		L0P7K0              	100.00%
Bootstrap support for H9G5G7 as seed ortholog is 100%.
Bootstrap support for L0P7K0 as seed ortholog is 100%.

Group of orthologs #78. Best score 732 bits
Score difference with first non-orthologous sequence - A.carolinensis:373 P.jiroveci:732

G1K8S0              	100.00%		L0PC37              	100.00%
Bootstrap support for G1K8S0 as seed ortholog is 100%.
Bootstrap support for L0PC37 as seed ortholog is 100%.

Group of orthologs #79. Best score 730 bits
Score difference with first non-orthologous sequence - A.carolinensis:730 P.jiroveci:730

G1KD17              	100.00%		L0PE57              	100.00%
G1KCS6              	27.67%		
Bootstrap support for G1KD17 as seed ortholog is 100%.
Bootstrap support for L0PE57 as seed ortholog is 100%.

Group of orthologs #80. Best score 730 bits
Score difference with first non-orthologous sequence - A.carolinensis:730 P.jiroveci:730

H9G5W8              	100.00%		L0P773              	100.00%
Bootstrap support for H9G5W8 as seed ortholog is 100%.
Bootstrap support for L0P773 as seed ortholog is 100%.

Group of orthologs #81. Best score 729 bits
Score difference with first non-orthologous sequence - A.carolinensis:729 P.jiroveci:729

G1KFW0              	100.00%		L0PBP8              	100.00%
Bootstrap support for G1KFW0 as seed ortholog is 100%.
Bootstrap support for L0PBP8 as seed ortholog is 100%.

Group of orthologs #82. Best score 728 bits
Score difference with first non-orthologous sequence - A.carolinensis:342 P.jiroveci:728

G1KG75              	100.00%		L0P9P7              	100.00%
Bootstrap support for G1KG75 as seed ortholog is 100%.
Bootstrap support for L0P9P7 as seed ortholog is 100%.

Group of orthologs #83. Best score 725 bits
Score difference with first non-orthologous sequence - A.carolinensis:725 P.jiroveci:725

G1KBP3              	100.00%		L0PBW3              	100.00%
Bootstrap support for G1KBP3 as seed ortholog is 100%.
Bootstrap support for L0PBW3 as seed ortholog is 100%.

Group of orthologs #84. Best score 720 bits
Score difference with first non-orthologous sequence - A.carolinensis:222 P.jiroveci:720

G1KLI0              	100.00%		L0PB85              	100.00%
H9G384              	40.69%		
Bootstrap support for G1KLI0 as seed ortholog is 99%.
Bootstrap support for L0PB85 as seed ortholog is 100%.

Group of orthologs #85. Best score 706 bits
Score difference with first non-orthologous sequence - A.carolinensis:323 P.jiroveci:416

H9G598              	100.00%		L0P7L0              	100.00%
                    	       		L0PCI7              	39.57%
Bootstrap support for H9G598 as seed ortholog is 100%.
Bootstrap support for L0P7L0 as seed ortholog is 100%.

Group of orthologs #86. Best score 705 bits
Score difference with first non-orthologous sequence - A.carolinensis:705 P.jiroveci:705

H9G560              	100.00%		L0P8L6              	100.00%
Bootstrap support for H9G560 as seed ortholog is 100%.
Bootstrap support for L0P8L6 as seed ortholog is 100%.

Group of orthologs #87. Best score 703 bits
Score difference with first non-orthologous sequence - A.carolinensis:432 P.jiroveci:703

G1KDS7              	100.00%		L0PBV5              	100.00%
Bootstrap support for G1KDS7 as seed ortholog is 100%.
Bootstrap support for L0PBV5 as seed ortholog is 100%.

Group of orthologs #88. Best score 702 bits
Score difference with first non-orthologous sequence - A.carolinensis:702 P.jiroveci:702

H9G9K0              	100.00%		L0PDF3              	100.00%
G1KTH7              	51.86%		
Bootstrap support for H9G9K0 as seed ortholog is 100%.
Bootstrap support for L0PDF3 as seed ortholog is 100%.

Group of orthologs #89. Best score 701 bits
Score difference with first non-orthologous sequence - A.carolinensis:701 P.jiroveci:701

G1KRA6              	100.00%		L0P7R6              	100.00%
                    	       		L0PHF8              	100.00%
Bootstrap support for G1KRA6 as seed ortholog is 100%.
Bootstrap support for L0P7R6 as seed ortholog is 100%.
Bootstrap support for L0PHF8 as seed ortholog is 100%.

Group of orthologs #90. Best score 701 bits
Score difference with first non-orthologous sequence - A.carolinensis:701 P.jiroveci:701

G1KHJ5              	100.00%		L0PG27              	100.00%
Bootstrap support for G1KHJ5 as seed ortholog is 100%.
Bootstrap support for L0PG27 as seed ortholog is 100%.

Group of orthologs #91. Best score 699 bits
Score difference with first non-orthologous sequence - A.carolinensis:699 P.jiroveci:699

G1KPJ7              	100.00%		L0PAQ3              	100.00%
H9GA02              	63.81%		
H9GKI5              	39.72%		
Bootstrap support for G1KPJ7 as seed ortholog is 100%.
Bootstrap support for L0PAQ3 as seed ortholog is 100%.

Group of orthologs #92. Best score 695 bits
Score difference with first non-orthologous sequence - A.carolinensis:695 P.jiroveci:278

G1KBB1              	100.00%		L0PEL5              	100.00%
                    	       		L0PGC2              	52.00%
Bootstrap support for G1KBB1 as seed ortholog is 100%.
Bootstrap support for L0PEL5 as seed ortholog is 100%.

Group of orthologs #93. Best score 689 bits
Score difference with first non-orthologous sequence - A.carolinensis:689 P.jiroveci:689

H9G787              	100.00%		L0PDK6              	100.00%
Bootstrap support for H9G787 as seed ortholog is 100%.
Bootstrap support for L0PDK6 as seed ortholog is 100%.

Group of orthologs #94. Best score 681 bits
Score difference with first non-orthologous sequence - A.carolinensis:416 P.jiroveci:681

G1KSW1              	100.00%		L0PG32              	100.00%
Bootstrap support for G1KSW1 as seed ortholog is 100%.
Bootstrap support for L0PG32 as seed ortholog is 100%.

Group of orthologs #95. Best score 680 bits
Score difference with first non-orthologous sequence - A.carolinensis:212 P.jiroveci:598

G1KQV5              	100.00%		L0PA91              	100.00%
H9G3X4              	49.35%		
L7MZG9              	49.35%		
G1K932              	48.05%		
L7MZF2              	45.45%		
H9GKG3              	44.16%		
H9GIX5              	38.96%		
H9G4Y6              	20.78%		
Bootstrap support for G1KQV5 as seed ortholog is 100%.
Bootstrap support for L0PA91 as seed ortholog is 100%.

Group of orthologs #96. Best score 680 bits
Score difference with first non-orthologous sequence - A.carolinensis:83 P.jiroveci:175

G1KPY0              	100.00%		L0P9U6              	100.00%
Bootstrap support for G1KPY0 as seed ortholog is 95%.
Bootstrap support for L0P9U6 as seed ortholog is 99%.

Group of orthologs #97. Best score 680 bits
Score difference with first non-orthologous sequence - A.carolinensis:466 P.jiroveci:466

H9GJS5              	100.00%		L0P976              	100.00%
Bootstrap support for H9GJS5 as seed ortholog is 100%.
Bootstrap support for L0P976 as seed ortholog is 100%.

Group of orthologs #98. Best score 678 bits
Score difference with first non-orthologous sequence - A.carolinensis:678 P.jiroveci:678

H9GNR8              	100.00%		L0PC65              	100.00%
G1KL32              	50.19%		
Bootstrap support for H9GNR8 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #99. Best score 678 bits
Score difference with first non-orthologous sequence - A.carolinensis:678 P.jiroveci:678

G1KJW5              	100.00%		L0P971              	100.00%
Bootstrap support for G1KJW5 as seed ortholog is 100%.
Bootstrap support for L0P971 as seed ortholog is 100%.

Group of orthologs #100. Best score 676 bits
Score difference with first non-orthologous sequence - A.carolinensis:400 P.jiroveci:676

G1KPF8              	100.00%		L0PBW7              	100.00%
Bootstrap support for G1KPF8 as seed ortholog is 100%.
Bootstrap support for L0PBW7 as seed ortholog is 100%.

Group of orthologs #101. Best score 676 bits
Score difference with first non-orthologous sequence - A.carolinensis:469 P.jiroveci:479

H9G3Z1              	100.00%		L0PG45              	100.00%
Bootstrap support for H9G3Z1 as seed ortholog is 100%.
Bootstrap support for L0PG45 as seed ortholog is 100%.

Group of orthologs #102. Best score 675 bits
Score difference with first non-orthologous sequence - A.carolinensis:451 P.jiroveci:464

G1KCR7              	100.00%		L0P945              	100.00%
Bootstrap support for G1KCR7 as seed ortholog is 100%.
Bootstrap support for L0P945 as seed ortholog is 100%.

Group of orthologs #103. Best score 670 bits
Score difference with first non-orthologous sequence - A.carolinensis:485 P.jiroveci:490

H9G992              	100.00%		L0PER6              	100.00%
Bootstrap support for H9G992 as seed ortholog is 100%.
Bootstrap support for L0PER6 as seed ortholog is 100%.

Group of orthologs #104. Best score 669 bits
Score difference with first non-orthologous sequence - A.carolinensis:669 P.jiroveci:669

G1KNY7              	100.00%		L0P8G2              	100.00%
G1KRG9              	58.88%		
Bootstrap support for G1KNY7 as seed ortholog is 100%.
Bootstrap support for L0P8G2 as seed ortholog is 100%.

Group of orthologs #105. Best score 669 bits
Score difference with first non-orthologous sequence - A.carolinensis:669 P.jiroveci:348

H9G724              	100.00%		L0P9U5              	100.00%
H9G3E4              	6.26%		
Bootstrap support for H9G724 as seed ortholog is 100%.
Bootstrap support for L0P9U5 as seed ortholog is 100%.

Group of orthologs #106. Best score 668 bits
Score difference with first non-orthologous sequence - A.carolinensis:668 P.jiroveci:668

G1KDP3              	100.00%		L0PBY5              	100.00%
Bootstrap support for G1KDP3 as seed ortholog is 100%.
Bootstrap support for L0PBY5 as seed ortholog is 100%.

Group of orthologs #107. Best score 667 bits
Score difference with first non-orthologous sequence - A.carolinensis:199 P.jiroveci:667

H9GTI8              	100.00%		L0PGU1              	100.00%
G1KUL8              	13.77%		
Bootstrap support for H9GTI8 as seed ortholog is 99%.
Bootstrap support for L0PGU1 as seed ortholog is 100%.

Group of orthologs #108. Best score 665 bits
Score difference with first non-orthologous sequence - A.carolinensis:607 P.jiroveci:665

H9GPG9              	100.00%		L0P8M6              	100.00%
G1KF46              	53.22%		
Bootstrap support for H9GPG9 as seed ortholog is 100%.
Bootstrap support for L0P8M6 as seed ortholog is 100%.

Group of orthologs #109. Best score 664 bits
Score difference with first non-orthologous sequence - A.carolinensis:330 P.jiroveci:664

G1KUJ8              	100.00%		L0PC79              	100.00%
G1KI22              	18.82%		
G1KP65              	10.28%		
Bootstrap support for G1KUJ8 as seed ortholog is 100%.
Bootstrap support for L0PC79 as seed ortholog is 100%.

Group of orthologs #110. Best score 663 bits
Score difference with first non-orthologous sequence - A.carolinensis:663 P.jiroveci:663

G1KGA3              	100.00%		L0PDI6              	100.00%
Bootstrap support for G1KGA3 as seed ortholog is 100%.
Bootstrap support for L0PDI6 as seed ortholog is 100%.

Group of orthologs #111. Best score 656 bits
Score difference with first non-orthologous sequence - A.carolinensis:560 P.jiroveci:656

H9GDP5              	100.00%		L0PA41              	100.00%
Bootstrap support for H9GDP5 as seed ortholog is 100%.
Bootstrap support for L0PA41 as seed ortholog is 100%.

Group of orthologs #112. Best score 654 bits
Score difference with first non-orthologous sequence - A.carolinensis:654 P.jiroveci:357

H9GCX9              	100.00%		L0PFG7              	100.00%
Bootstrap support for H9GCX9 as seed ortholog is 100%.
Bootstrap support for L0PFG7 as seed ortholog is 100%.

Group of orthologs #113. Best score 652 bits
Score difference with first non-orthologous sequence - A.carolinensis:383 P.jiroveci:382

G1KAN3              	100.00%		L0PE26              	100.00%
Bootstrap support for G1KAN3 as seed ortholog is 100%.
Bootstrap support for L0PE26 as seed ortholog is 100%.

Group of orthologs #114. Best score 646 bits
Score difference with first non-orthologous sequence - A.carolinensis:646 P.jiroveci:646

G1KSW6              	100.00%		L0PAS8              	100.00%
Bootstrap support for G1KSW6 as seed ortholog is 100%.
Bootstrap support for L0PAS8 as seed ortholog is 100%.

Group of orthologs #115. Best score 643 bits
Score difference with first non-orthologous sequence - A.carolinensis:643 P.jiroveci:514

H9GI11              	100.00%		L0PIF0              	100.00%
H9G8M7              	26.03%		
H9GST8              	16.00%		
H9GB69              	14.70%		
H9GMD1              	13.30%		
H9GTU5              	11.55%		
H9GM33              	10.99%		
H9GMG9              	8.17%		
Bootstrap support for H9GI11 as seed ortholog is 100%.
Bootstrap support for L0PIF0 as seed ortholog is 100%.

Group of orthologs #116. Best score 643 bits
Score difference with first non-orthologous sequence - A.carolinensis:643 P.jiroveci:643

G1KID2              	100.00%		L0PEQ8              	100.00%
H9GAR9              	56.05%		
G1KHK4              	51.58%		
Bootstrap support for G1KID2 as seed ortholog is 100%.
Bootstrap support for L0PEQ8 as seed ortholog is 100%.

Group of orthologs #117. Best score 636 bits
Score difference with first non-orthologous sequence - A.carolinensis:636 P.jiroveci:636

G1KSI5              	100.00%		L0PDG3              	100.00%
Bootstrap support for G1KSI5 as seed ortholog is 100%.
Bootstrap support for L0PDG3 as seed ortholog is 100%.

Group of orthologs #118. Best score 632 bits
Score difference with first non-orthologous sequence - A.carolinensis:632 P.jiroveci:632

G1KDD4              	100.00%		L0P7V2              	100.00%
Bootstrap support for G1KDD4 as seed ortholog is 100%.
Bootstrap support for L0P7V2 as seed ortholog is 100%.

Group of orthologs #119. Best score 631 bits
Score difference with first non-orthologous sequence - A.carolinensis:631 P.jiroveci:631

G1KM79              	100.00%		L0P8C8              	100.00%
Bootstrap support for G1KM79 as seed ortholog is 100%.
Bootstrap support for L0P8C8 as seed ortholog is 100%.

Group of orthologs #120. Best score 626 bits
Score difference with first non-orthologous sequence - A.carolinensis:506 P.jiroveci:626

H9GDQ8              	100.00%		L0PEP7              	100.00%
Bootstrap support for H9GDQ8 as seed ortholog is 100%.
Bootstrap support for L0PEP7 as seed ortholog is 100%.

Group of orthologs #121. Best score 624 bits
Score difference with first non-orthologous sequence - A.carolinensis:624 P.jiroveci:624

H9G7M9              	100.00%		L0PF80              	100.00%
Bootstrap support for H9G7M9 as seed ortholog is 100%.
Bootstrap support for L0PF80 as seed ortholog is 100%.

Group of orthologs #122. Best score 622 bits
Score difference with first non-orthologous sequence - A.carolinensis:622 P.jiroveci:395

G1KAI3              	100.00%		L0P8L4              	100.00%
H9GDC9              	34.93%		
Bootstrap support for G1KAI3 as seed ortholog is 100%.
Bootstrap support for L0P8L4 as seed ortholog is 100%.

Group of orthologs #123. Best score 619 bits
Score difference with first non-orthologous sequence - A.carolinensis:619 P.jiroveci:619

G1KBJ0              	100.00%		L0PCV7              	100.00%
Bootstrap support for G1KBJ0 as seed ortholog is 100%.
Bootstrap support for L0PCV7 as seed ortholog is 100%.

Group of orthologs #124. Best score 619 bits
Score difference with first non-orthologous sequence - A.carolinensis:337 P.jiroveci:619

H9GIQ9              	100.00%		L0PD31              	100.00%
Bootstrap support for H9GIQ9 as seed ortholog is 100%.
Bootstrap support for L0PD31 as seed ortholog is 100%.

Group of orthologs #125. Best score 618 bits
Score difference with first non-orthologous sequence - A.carolinensis:541 P.jiroveci:618

G1KRY7              	100.00%		L0PD32              	100.00%
                    	       		L0PD26              	93.68%
Bootstrap support for G1KRY7 as seed ortholog is 100%.
Bootstrap support for L0PD32 as seed ortholog is 100%.

Group of orthologs #126. Best score 617 bits
Score difference with first non-orthologous sequence - A.carolinensis:617 P.jiroveci:617

H9GDA6              	100.00%		L0P9S1              	100.00%
Bootstrap support for H9GDA6 as seed ortholog is 100%.
Bootstrap support for L0P9S1 as seed ortholog is 100%.

Group of orthologs #127. Best score 617 bits
Score difference with first non-orthologous sequence - A.carolinensis:617 P.jiroveci:617

H9GF92              	100.00%		L0PBJ1              	100.00%
Bootstrap support for H9GF92 as seed ortholog is 100%.
Bootstrap support for L0PBJ1 as seed ortholog is 100%.

Group of orthologs #128. Best score 614 bits
Score difference with first non-orthologous sequence - A.carolinensis:246 P.jiroveci:384

G1KAA2              	100.00%		L0P8E7              	100.00%
Bootstrap support for G1KAA2 as seed ortholog is 100%.
Bootstrap support for L0P8E7 as seed ortholog is 100%.

Group of orthologs #129. Best score 613 bits
Score difference with first non-orthologous sequence - A.carolinensis:521 P.jiroveci:613

G1KJE3              	100.00%		L0PFW1              	100.00%
G1KJ35              	79.75%		
G1KM20              	76.36%		
G1KK12              	68.33%		
H9GGK6              	46.13%		
Bootstrap support for G1KJE3 as seed ortholog is 100%.
Bootstrap support for L0PFW1 as seed ortholog is 100%.

Group of orthologs #130. Best score 609 bits
Score difference with first non-orthologous sequence - A.carolinensis:609 P.jiroveci:544

H9GFC4              	100.00%		L0PDM6              	100.00%
Bootstrap support for H9GFC4 as seed ortholog is 100%.
Bootstrap support for L0PDM6 as seed ortholog is 100%.

Group of orthologs #131. Best score 606 bits
Score difference with first non-orthologous sequence - A.carolinensis:606 P.jiroveci:606

G1KEH8              	100.00%		L0PA85              	100.00%
Bootstrap support for G1KEH8 as seed ortholog is 100%.
Bootstrap support for L0PA85 as seed ortholog is 100%.

Group of orthologs #132. Best score 597 bits
Score difference with first non-orthologous sequence - A.carolinensis:364 P.jiroveci:409

H9GP00              	100.00%		L0P853              	100.00%
                    	       		L0P8M8              	55.04%
Bootstrap support for H9GP00 as seed ortholog is 100%.
Bootstrap support for L0P853 as seed ortholog is 100%.

Group of orthologs #133. Best score 597 bits
Score difference with first non-orthologous sequence - A.carolinensis:597 P.jiroveci:597

G1KRC2              	100.00%		L0PBN0              	100.00%
Bootstrap support for G1KRC2 as seed ortholog is 100%.
Bootstrap support for L0PBN0 as seed ortholog is 100%.

Group of orthologs #134. Best score 595 bits
Score difference with first non-orthologous sequence - A.carolinensis:595 P.jiroveci:595

H9GMK0              	100.00%		L0P8W6              	100.00%
Bootstrap support for H9GMK0 as seed ortholog is 100%.
Bootstrap support for L0P8W6 as seed ortholog is 100%.

Group of orthologs #135. Best score 591 bits
Score difference with first non-orthologous sequence - A.carolinensis:591 P.jiroveci:591

H9GH66              	100.00%		L0P7T0              	100.00%
H9G579              	28.98%		
Bootstrap support for H9GH66 as seed ortholog is 100%.
Bootstrap support for L0P7T0 as seed ortholog is 100%.

Group of orthologs #136. Best score 588 bits
Score difference with first non-orthologous sequence - A.carolinensis:246 P.jiroveci:588

G1K898              	100.00%		L0PC44              	100.00%
Bootstrap support for G1K898 as seed ortholog is 99%.
Bootstrap support for L0PC44 as seed ortholog is 100%.

Group of orthologs #137. Best score 588 bits
Score difference with first non-orthologous sequence - A.carolinensis:148 P.jiroveci:316

G1KUJ3              	100.00%		L0PDY0              	100.00%
Bootstrap support for G1KUJ3 as seed ortholog is 99%.
Bootstrap support for L0PDY0 as seed ortholog is 100%.

Group of orthologs #138. Best score 587 bits
Score difference with first non-orthologous sequence - A.carolinensis:587 P.jiroveci:587

H9GAV3              	100.00%		L0PAX4              	100.00%
Bootstrap support for H9GAV3 as seed ortholog is 100%.
Bootstrap support for L0PAX4 as seed ortholog is 100%.

Group of orthologs #139. Best score 587 bits
Score difference with first non-orthologous sequence - A.carolinensis:197 P.jiroveci:226

H9GLD7              	100.00%		L0PEK2              	100.00%
Bootstrap support for H9GLD7 as seed ortholog is 100%.
Bootstrap support for L0PEK2 as seed ortholog is 99%.

Group of orthologs #140. Best score 583 bits
Score difference with first non-orthologous sequence - A.carolinensis:583 P.jiroveci:583

G1KHV4              	100.00%		L0P917              	100.00%
                    	       		L0PF20              	85.77%
Bootstrap support for G1KHV4 as seed ortholog is 100%.
Bootstrap support for L0P917 as seed ortholog is 100%.

Group of orthologs #141. Best score 581 bits
Score difference with first non-orthologous sequence - A.carolinensis:108 P.jiroveci:581

G1KMD1              	100.00%		L0P9J9              	100.00%
Bootstrap support for G1KMD1 as seed ortholog is 98%.
Bootstrap support for L0P9J9 as seed ortholog is 100%.

Group of orthologs #142. Best score 581 bits
Score difference with first non-orthologous sequence - A.carolinensis:351 P.jiroveci:581

G1KP80              	100.00%		L0PAR0              	100.00%
Bootstrap support for G1KP80 as seed ortholog is 100%.
Bootstrap support for L0PAR0 as seed ortholog is 100%.

Group of orthologs #143. Best score 579 bits
Score difference with first non-orthologous sequence - A.carolinensis:579 P.jiroveci:579

G1KJB7              	100.00%		L0PES7              	100.00%
Bootstrap support for G1KJB7 as seed ortholog is 100%.
Bootstrap support for L0PES7 as seed ortholog is 100%.

Group of orthologs #144. Best score 578 bits
Score difference with first non-orthologous sequence - A.carolinensis:489 P.jiroveci:578

H9GGK1              	100.00%		L0PB97              	100.00%
Bootstrap support for H9GGK1 as seed ortholog is 100%.
Bootstrap support for L0PB97 as seed ortholog is 100%.

Group of orthologs #145. Best score 577 bits
Score difference with first non-orthologous sequence - A.carolinensis:577 P.jiroveci:198

G1KHF3              	100.00%		L0PBH4              	100.00%
H9G5Z7              	12.77%		
G1KIW6              	7.09%		
Bootstrap support for G1KHF3 as seed ortholog is 100%.
Bootstrap support for L0PBH4 as seed ortholog is 100%.

Group of orthologs #146. Best score 577 bits
Score difference with first non-orthologous sequence - A.carolinensis:126 P.jiroveci:577

H9G9G7              	100.00%		L0PBW1              	100.00%
H9GBL6              	56.30%		
Bootstrap support for H9G9G7 as seed ortholog is 99%.
Bootstrap support for L0PBW1 as seed ortholog is 100%.

Group of orthologs #147. Best score 576 bits
Score difference with first non-orthologous sequence - A.carolinensis:576 P.jiroveci:576

G1KG63              	100.00%		L0PDD5              	100.00%
Bootstrap support for G1KG63 as seed ortholog is 100%.
Bootstrap support for L0PDD5 as seed ortholog is 100%.

Group of orthologs #148. Best score 576 bits
Score difference with first non-orthologous sequence - A.carolinensis:486 P.jiroveci:508

H9G9D7              	100.00%		L0PCS2              	100.00%
Bootstrap support for H9G9D7 as seed ortholog is 100%.
Bootstrap support for L0PCS2 as seed ortholog is 100%.

Group of orthologs #149. Best score 574 bits
Score difference with first non-orthologous sequence - A.carolinensis:574 P.jiroveci:574

G1KE39              	100.00%		L0PG37              	100.00%
H9G394              	48.30%		
G1KS59              	6.44%		
Bootstrap support for G1KE39 as seed ortholog is 100%.
Bootstrap support for L0PG37 as seed ortholog is 100%.

Group of orthologs #150. Best score 572 bits
Score difference with first non-orthologous sequence - A.carolinensis:238 P.jiroveci:372

G1KPX6              	100.00%		L0PC64              	100.00%
Bootstrap support for G1KPX6 as seed ortholog is 100%.
Bootstrap support for L0PC64 as seed ortholog is 100%.

Group of orthologs #151. Best score 571 bits
Score difference with first non-orthologous sequence - A.carolinensis:51 P.jiroveci:571

G1KJ85              	100.00%		L0PF72              	100.00%
Bootstrap support for G1KJ85 as seed ortholog is 86%.
Bootstrap support for L0PF72 as seed ortholog is 100%.

Group of orthologs #152. Best score 571 bits
Score difference with first non-orthologous sequence - A.carolinensis:571 P.jiroveci:571

H9GNN2              	100.00%		L0PFI9              	100.00%
Bootstrap support for H9GNN2 as seed ortholog is 100%.
Bootstrap support for L0PFI9 as seed ortholog is 100%.

Group of orthologs #153. Best score 569 bits
Score difference with first non-orthologous sequence - A.carolinensis:569 P.jiroveci:569

G1KGV0              	100.00%		L0PDR3              	100.00%
Bootstrap support for G1KGV0 as seed ortholog is 100%.
Bootstrap support for L0PDR3 as seed ortholog is 100%.

Group of orthologs #154. Best score 569 bits
Score difference with first non-orthologous sequence - A.carolinensis:569 P.jiroveci:569

H9GHZ3              	100.00%		L0PCT1              	100.00%
Bootstrap support for H9GHZ3 as seed ortholog is 100%.
Bootstrap support for L0PCT1 as seed ortholog is 100%.

Group of orthologs #155. Best score 568 bits
Score difference with first non-orthologous sequence - A.carolinensis:130 P.jiroveci:568

G1KH03              	100.00%		L0P9D4              	100.00%
Bootstrap support for G1KH03 as seed ortholog is 99%.
Bootstrap support for L0P9D4 as seed ortholog is 100%.

Group of orthologs #156. Best score 568 bits
Score difference with first non-orthologous sequence - A.carolinensis:568 P.jiroveci:568

G1KRM3              	100.00%		L0PDU2              	100.00%
Bootstrap support for G1KRM3 as seed ortholog is 100%.
Bootstrap support for L0PDU2 as seed ortholog is 100%.

Group of orthologs #157. Best score 566 bits
Score difference with first non-orthologous sequence - A.carolinensis:566 P.jiroveci:566

H9GVY1              	100.00%		L0PHB7              	100.00%
Bootstrap support for H9GVY1 as seed ortholog is 100%.
Bootstrap support for L0PHB7 as seed ortholog is 100%.

Group of orthologs #158. Best score 563 bits
Score difference with first non-orthologous sequence - A.carolinensis:563 P.jiroveci:563

G1KEH7              	100.00%		L0PA45              	100.00%
Bootstrap support for G1KEH7 as seed ortholog is 100%.
Bootstrap support for L0PA45 as seed ortholog is 100%.

Group of orthologs #159. Best score 561 bits
Score difference with first non-orthologous sequence - A.carolinensis:561 P.jiroveci:561

H9GS32              	100.00%		L0PBM4              	100.00%
Bootstrap support for H9GS32 as seed ortholog is 100%.
Bootstrap support for L0PBM4 as seed ortholog is 100%.

Group of orthologs #160. Best score 560 bits
Score difference with first non-orthologous sequence - A.carolinensis:71 P.jiroveci:26

G1KM32              	100.00%		L0PGY9              	100.00%
H9G8L6              	69.60%		
Bootstrap support for G1KM32 as seed ortholog is 95%.
Bootstrap support for L0PGY9 as seed ortholog is 74%.
Alternative seed ortholog is L0PCK5 (26 bits away from this cluster)

Group of orthologs #161. Best score 555 bits
Score difference with first non-orthologous sequence - A.carolinensis:555 P.jiroveci:555

H9G532              	100.00%		L0P8P8              	100.00%
Bootstrap support for H9G532 as seed ortholog is 100%.
Bootstrap support for L0P8P8 as seed ortholog is 100%.

Group of orthologs #162. Best score 555 bits
Score difference with first non-orthologous sequence - A.carolinensis:555 P.jiroveci:555

H9G366              	100.00%		L0PG02              	100.00%
Bootstrap support for H9G366 as seed ortholog is 100%.
Bootstrap support for L0PG02 as seed ortholog is 100%.

Group of orthologs #163. Best score 551 bits
Score difference with first non-orthologous sequence - A.carolinensis:417 P.jiroveci:197

G1KB14              	100.00%		L0P7D9              	100.00%
H9G796              	88.35%		
Bootstrap support for G1KB14 as seed ortholog is 100%.
Bootstrap support for L0P7D9 as seed ortholog is 100%.

Group of orthologs #164. Best score 551 bits
Score difference with first non-orthologous sequence - A.carolinensis:551 P.jiroveci:383

G1K9T7              	100.00%		L0PCD8              	100.00%
Bootstrap support for G1K9T7 as seed ortholog is 100%.
Bootstrap support for L0PCD8 as seed ortholog is 100%.

Group of orthologs #165. Best score 548 bits
Score difference with first non-orthologous sequence - A.carolinensis:329 P.jiroveci:375

G1KK81              	100.00%		L0PGA5              	100.00%
Bootstrap support for G1KK81 as seed ortholog is 100%.
Bootstrap support for L0PGA5 as seed ortholog is 100%.

Group of orthologs #166. Best score 545 bits
Score difference with first non-orthologous sequence - A.carolinensis:545 P.jiroveci:545

G1KGC0              	100.00%		L0PFT7              	100.00%
Bootstrap support for G1KGC0 as seed ortholog is 100%.
Bootstrap support for L0PFT7 as seed ortholog is 100%.

Group of orthologs #167. Best score 545 bits
Score difference with first non-orthologous sequence - A.carolinensis:545 P.jiroveci:545

H9GB53              	100.00%		L0PBV4              	100.00%
Bootstrap support for H9GB53 as seed ortholog is 100%.
Bootstrap support for L0PBV4 as seed ortholog is 100%.

Group of orthologs #168. Best score 539 bits
Score difference with first non-orthologous sequence - A.carolinensis:539 P.jiroveci:539

H9GEM3              	100.00%		L0P9U3              	100.00%
Bootstrap support for H9GEM3 as seed ortholog is 100%.
Bootstrap support for L0P9U3 as seed ortholog is 100%.

Group of orthologs #169. Best score 537 bits
Score difference with first non-orthologous sequence - A.carolinensis:537 P.jiroveci:537

H9GNC3              	100.00%		L0P802              	100.00%
H9G6I5              	48.97%		
G1KLR8              	48.43%		
Bootstrap support for H9GNC3 as seed ortholog is 100%.
Bootstrap support for L0P802 as seed ortholog is 100%.

Group of orthologs #170. Best score 537 bits
Score difference with first non-orthologous sequence - A.carolinensis:537 P.jiroveci:537

H9GJJ0              	100.00%		L0PBR9              	100.00%
H9G9N0              	35.88%		
Bootstrap support for H9GJJ0 as seed ortholog is 100%.
Bootstrap support for L0PBR9 as seed ortholog is 100%.

Group of orthologs #171. Best score 535 bits
Score difference with first non-orthologous sequence - A.carolinensis:459 P.jiroveci:535

H9GCG4              	100.00%		L0PCA7              	100.00%
Bootstrap support for H9GCG4 as seed ortholog is 100%.
Bootstrap support for L0PCA7 as seed ortholog is 100%.

Group of orthologs #172. Best score 534 bits
Score difference with first non-orthologous sequence - A.carolinensis:534 P.jiroveci:534

G1KI99              	100.00%		L0PAN9              	100.00%
                    	       		L0PID8              	82.74%
Bootstrap support for G1KI99 as seed ortholog is 100%.
Bootstrap support for L0PAN9 as seed ortholog is 100%.

Group of orthologs #173. Best score 529 bits
Score difference with first non-orthologous sequence - A.carolinensis:205 P.jiroveci:317

H9GD09              	100.00%		L0P7V6              	100.00%
Bootstrap support for H9GD09 as seed ortholog is 100%.
Bootstrap support for L0P7V6 as seed ortholog is 100%.

Group of orthologs #174. Best score 527 bits
Score difference with first non-orthologous sequence - A.carolinensis:329 P.jiroveci:527

G1KA18              	100.00%		L0PB12              	100.00%
Bootstrap support for G1KA18 as seed ortholog is 100%.
Bootstrap support for L0PB12 as seed ortholog is 100%.

Group of orthologs #175. Best score 527 bits
Score difference with first non-orthologous sequence - A.carolinensis:300 P.jiroveci:284

G1KC65              	100.00%		L0PEP2              	100.00%
Bootstrap support for G1KC65 as seed ortholog is 100%.
Bootstrap support for L0PEP2 as seed ortholog is 100%.

Group of orthologs #176. Best score 527 bits
Score difference with first non-orthologous sequence - A.carolinensis:279 P.jiroveci:527

G1KGB0              	100.00%		L0PET9              	100.00%
Bootstrap support for G1KGB0 as seed ortholog is 100%.
Bootstrap support for L0PET9 as seed ortholog is 100%.

Group of orthologs #177. Best score 526 bits
Score difference with first non-orthologous sequence - A.carolinensis:526 P.jiroveci:526

G1KFD9              	100.00%		L0PEZ0              	100.00%
Bootstrap support for G1KFD9 as seed ortholog is 100%.
Bootstrap support for L0PEZ0 as seed ortholog is 100%.

Group of orthologs #178. Best score 525 bits
Score difference with first non-orthologous sequence - A.carolinensis:189 P.jiroveci:525

H9GKW3              	100.00%		L0P905              	100.00%
H9GH89              	30.60%		
G1KAR7              	10.29%		
H9GAG9              	8.60%		
H9G4H8              	7.27%		
H9G7V8              	6.63%		
G1KCJ5              	5.76%		
Bootstrap support for H9GKW3 as seed ortholog is 99%.
Bootstrap support for L0P905 as seed ortholog is 100%.

Group of orthologs #179. Best score 524 bits
Score difference with first non-orthologous sequence - A.carolinensis:289 P.jiroveci:524

G1KNK5              	100.00%		L0PBI1              	100.00%
G1KLL7              	49.04%		
G1KDG7              	43.04%		
Bootstrap support for G1KNK5 as seed ortholog is 100%.
Bootstrap support for L0PBI1 as seed ortholog is 100%.

Group of orthologs #180. Best score 523 bits
Score difference with first non-orthologous sequence - A.carolinensis:523 P.jiroveci:523

H9GB95              	100.00%		L0PCX1              	100.00%
H9GEV2              	100.00%		
Bootstrap support for H9GB95 as seed ortholog is 100%.
Bootstrap support for H9GEV2 as seed ortholog is 100%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #181. Best score 522 bits
Score difference with first non-orthologous sequence - A.carolinensis:270 P.jiroveci:146

G1KNY1              	100.00%		L0P718              	100.00%
Bootstrap support for G1KNY1 as seed ortholog is 100%.
Bootstrap support for L0P718 as seed ortholog is 99%.

Group of orthologs #182. Best score 521 bits
Score difference with first non-orthologous sequence - A.carolinensis:296 P.jiroveci:521

H9GEZ2              	100.00%		L0P9I8              	100.00%
Bootstrap support for H9GEZ2 as seed ortholog is 100%.
Bootstrap support for L0P9I8 as seed ortholog is 100%.

Group of orthologs #183. Best score 518 bits
Score difference with first non-orthologous sequence - A.carolinensis:518 P.jiroveci:518

H9GG35              	100.00%		L0PEA0              	100.00%
Bootstrap support for H9GG35 as seed ortholog is 100%.
Bootstrap support for L0PEA0 as seed ortholog is 100%.

Group of orthologs #184. Best score 515 bits
Score difference with first non-orthologous sequence - A.carolinensis:335 P.jiroveci:515

G1KFC2              	100.00%		L0P6Y2              	100.00%
Bootstrap support for G1KFC2 as seed ortholog is 100%.
Bootstrap support for L0P6Y2 as seed ortholog is 100%.

Group of orthologs #185. Best score 515 bits
Score difference with first non-orthologous sequence - A.carolinensis:350 P.jiroveci:515

G1KPF5              	100.00%		L0PC99              	100.00%
Bootstrap support for G1KPF5 as seed ortholog is 100%.
Bootstrap support for L0PC99 as seed ortholog is 100%.

Group of orthologs #186. Best score 514 bits
Score difference with first non-orthologous sequence - A.carolinensis:206 P.jiroveci:514

H9GBQ6              	100.00%		L0P8E8              	100.00%
                    	       		L0PEB0              	100.00%
Bootstrap support for H9GBQ6 as seed ortholog is 99%.
Bootstrap support for L0P8E8 as seed ortholog is 100%.
Bootstrap support for L0PEB0 as seed ortholog is 100%.

Group of orthologs #187. Best score 514 bits
Score difference with first non-orthologous sequence - A.carolinensis:274 P.jiroveci:514

H9GGS3              	100.00%		L0PBP3              	100.00%
G1K8E1              	49.68%		
Bootstrap support for H9GGS3 as seed ortholog is 100%.
Bootstrap support for L0PBP3 as seed ortholog is 100%.

Group of orthologs #188. Best score 513 bits
Score difference with first non-orthologous sequence - A.carolinensis:513 P.jiroveci:152

G1KTL9              	100.00%		L0PGE8              	100.00%
Bootstrap support for G1KTL9 as seed ortholog is 100%.
Bootstrap support for L0PGE8 as seed ortholog is 99%.

Group of orthologs #189. Best score 512 bits
Score difference with first non-orthologous sequence - A.carolinensis:371 P.jiroveci:512

H9GHC9              	100.00%		L0PFQ5              	100.00%
Bootstrap support for H9GHC9 as seed ortholog is 100%.
Bootstrap support for L0PFQ5 as seed ortholog is 100%.

Group of orthologs #190. Best score 511 bits
Score difference with first non-orthologous sequence - A.carolinensis:130 P.jiroveci:511

G1KN81              	100.00%		L0P9A8              	100.00%
                    	       		L0PHB9              	76.20%
Bootstrap support for G1KN81 as seed ortholog is 99%.
Bootstrap support for L0P9A8 as seed ortholog is 100%.

Group of orthologs #191. Best score 511 bits
Score difference with first non-orthologous sequence - A.carolinensis:305 P.jiroveci:511

G1KRM0              	100.00%		L0P7B5              	100.00%
H9GBM6              	25.85%		
Bootstrap support for G1KRM0 as seed ortholog is 100%.
Bootstrap support for L0P7B5 as seed ortholog is 100%.

Group of orthologs #192. Best score 511 bits
Score difference with first non-orthologous sequence - A.carolinensis:511 P.jiroveci:454

G1K905              	100.00%		L0P7R1              	100.00%
Bootstrap support for G1K905 as seed ortholog is 100%.
Bootstrap support for L0P7R1 as seed ortholog is 100%.

Group of orthologs #193. Best score 510 bits
Score difference with first non-orthologous sequence - A.carolinensis:510 P.jiroveci:510

G1K9E2              	100.00%		L0P6X8              	100.00%
Bootstrap support for G1K9E2 as seed ortholog is 100%.
Bootstrap support for L0P6X8 as seed ortholog is 100%.

Group of orthologs #194. Best score 510 bits
Score difference with first non-orthologous sequence - A.carolinensis:410 P.jiroveci:510

G1KPL5              	100.00%		L0PB50              	100.00%
Bootstrap support for G1KPL5 as seed ortholog is 100%.
Bootstrap support for L0PB50 as seed ortholog is 100%.

Group of orthologs #195. Best score 510 bits
Score difference with first non-orthologous sequence - A.carolinensis:338 P.jiroveci:510

G1KTP4              	100.00%		L0PAA4              	100.00%
Bootstrap support for G1KTP4 as seed ortholog is 100%.
Bootstrap support for L0PAA4 as seed ortholog is 100%.

Group of orthologs #196. Best score 508 bits
Score difference with first non-orthologous sequence - A.carolinensis:233 P.jiroveci:353

G1K869              	100.00%		L0PE41              	100.00%
Bootstrap support for G1K869 as seed ortholog is 99%.
Bootstrap support for L0PE41 as seed ortholog is 100%.

Group of orthologs #197. Best score 506 bits
Score difference with first non-orthologous sequence - A.carolinensis:506 P.jiroveci:506

H9GHV0              	100.00%		L0P969              	100.00%
Bootstrap support for H9GHV0 as seed ortholog is 100%.
Bootstrap support for L0P969 as seed ortholog is 100%.

Group of orthologs #198. Best score 505 bits
Score difference with first non-orthologous sequence - A.carolinensis:45 P.jiroveci:450

G1KAV5              	100.00%		L0P890              	100.00%
H9GDS4              	61.59%		
Bootstrap support for G1KAV5 as seed ortholog is 88%.
Bootstrap support for L0P890 as seed ortholog is 100%.

Group of orthologs #199. Best score 505 bits
Score difference with first non-orthologous sequence - A.carolinensis:505 P.jiroveci:505

H9G5K6              	100.00%		L0PAS3              	100.00%
G1KMU3              	42.66%		
Bootstrap support for H9G5K6 as seed ortholog is 100%.
Bootstrap support for L0PAS3 as seed ortholog is 100%.

Group of orthologs #200. Best score 505 bits
Score difference with first non-orthologous sequence - A.carolinensis:505 P.jiroveci:505

H9GF04              	100.00%		L0PAL6              	100.00%
Bootstrap support for H9GF04 as seed ortholog is 100%.
Bootstrap support for L0PAL6 as seed ortholog is 100%.

Group of orthologs #201. Best score 503 bits
Score difference with first non-orthologous sequence - A.carolinensis:503 P.jiroveci:503

G1KAQ2              	100.00%		L0PC09              	100.00%
Bootstrap support for G1KAQ2 as seed ortholog is 100%.
Bootstrap support for L0PC09 as seed ortholog is 100%.

Group of orthologs #202. Best score 503 bits
Score difference with first non-orthologous sequence - A.carolinensis:439 P.jiroveci:503

H9G8H7              	100.00%		L0P7N1              	100.00%
Bootstrap support for H9G8H7 as seed ortholog is 100%.
Bootstrap support for L0P7N1 as seed ortholog is 100%.

Group of orthologs #203. Best score 503 bits
Score difference with first non-orthologous sequence - A.carolinensis:503 P.jiroveci:503

H9GFF3              	100.00%		L0PEL0              	100.00%
Bootstrap support for H9GFF3 as seed ortholog is 100%.
Bootstrap support for L0PEL0 as seed ortholog is 100%.

Group of orthologs #204. Best score 500 bits
Score difference with first non-orthologous sequence - A.carolinensis:420 P.jiroveci:436

H9G7H0              	100.00%		L0P992              	100.00%
Bootstrap support for H9G7H0 as seed ortholog is 100%.
Bootstrap support for L0P992 as seed ortholog is 100%.

Group of orthologs #205. Best score 497 bits
Score difference with first non-orthologous sequence - A.carolinensis:497 P.jiroveci:280

H9GJ82              	100.00%		L0PF08              	100.00%
H9GG17              	65.34%		
H9GGZ5              	61.90%		
Bootstrap support for H9GJ82 as seed ortholog is 100%.
Bootstrap support for L0PF08 as seed ortholog is 100%.

Group of orthologs #206. Best score 496 bits
Score difference with first non-orthologous sequence - A.carolinensis:383 P.jiroveci:404

G1KRH3              	100.00%		L0PDG5              	100.00%
Bootstrap support for G1KRH3 as seed ortholog is 100%.
Bootstrap support for L0PDG5 as seed ortholog is 100%.

Group of orthologs #207. Best score 495 bits
Score difference with first non-orthologous sequence - A.carolinensis:53 P.jiroveci:495

G1KPA4              	100.00%		L0PBN5              	100.00%
Bootstrap support for G1KPA4 as seed ortholog is 82%.
Bootstrap support for L0PBN5 as seed ortholog is 100%.

Group of orthologs #208. Best score 494 bits
Score difference with first non-orthologous sequence - A.carolinensis:428 P.jiroveci:445

H9GA61              	100.00%		L0P9G2              	100.00%
Bootstrap support for H9GA61 as seed ortholog is 100%.
Bootstrap support for L0P9G2 as seed ortholog is 100%.

Group of orthologs #209. Best score 493 bits
Score difference with first non-orthologous sequence - A.carolinensis:493 P.jiroveci:493

H9GL09              	100.00%		L0P8F1              	100.00%
G1KHE3              	78.18%		
H9GAX8              	77.66%		
G1KDP8              	70.39%		
Bootstrap support for H9GL09 as seed ortholog is 100%.
Bootstrap support for L0P8F1 as seed ortholog is 100%.

Group of orthologs #210. Best score 493 bits
Score difference with first non-orthologous sequence - A.carolinensis:493 P.jiroveci:493

G1KDD8              	100.00%		L0P8Z9              	100.00%
Bootstrap support for G1KDD8 as seed ortholog is 100%.
Bootstrap support for L0P8Z9 as seed ortholog is 100%.

Group of orthologs #211. Best score 492 bits
Score difference with first non-orthologous sequence - A.carolinensis:301 P.jiroveci:52

H9GMP4              	100.00%		L0PAI4              	100.00%
G1K960              	57.42%		
H9GB85              	53.18%		
Bootstrap support for H9GMP4 as seed ortholog is 100%.
Bootstrap support for L0PAI4 as seed ortholog is 83%.

Group of orthologs #212. Best score 492 bits
Score difference with first non-orthologous sequence - A.carolinensis:451 P.jiroveci:492

H9GFR0              	100.00%		L0P9V7              	100.00%
G1KP05              	37.27%		
Bootstrap support for H9GFR0 as seed ortholog is 100%.
Bootstrap support for L0P9V7 as seed ortholog is 100%.

Group of orthologs #213. Best score 492 bits
Score difference with first non-orthologous sequence - A.carolinensis:408 P.jiroveci:492

H9GKC7              	100.00%		L0PDH7              	100.00%
Bootstrap support for H9GKC7 as seed ortholog is 100%.
Bootstrap support for L0PDH7 as seed ortholog is 100%.

Group of orthologs #214. Best score 491 bits
Score difference with first non-orthologous sequence - A.carolinensis:346 P.jiroveci:370

H9GHI1              	100.00%		L0PE30              	100.00%
G1KCJ4              	75.48%		
H9GDW6              	22.29%		
Bootstrap support for H9GHI1 as seed ortholog is 100%.
Bootstrap support for L0PE30 as seed ortholog is 100%.

Group of orthologs #215. Best score 490 bits
Score difference with first non-orthologous sequence - A.carolinensis:490 P.jiroveci:309

G1KAG5              	100.00%		L0PFN9              	100.00%
H9GGN6              	68.80%		
Bootstrap support for G1KAG5 as seed ortholog is 100%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #216. Best score 489 bits
Score difference with first non-orthologous sequence - A.carolinensis:225 P.jiroveci:356

G1KMA1              	100.00%		L0PB67              	100.00%
G1KSU7              	73.46%		
Bootstrap support for G1KMA1 as seed ortholog is 100%.
Bootstrap support for L0PB67 as seed ortholog is 100%.

Group of orthologs #217. Best score 488 bits
Score difference with first non-orthologous sequence - A.carolinensis:488 P.jiroveci:488

H9GMI4              	100.00%		L0PG55              	100.00%
G1KBK2              	65.30%		
Bootstrap support for H9GMI4 as seed ortholog is 100%.
Bootstrap support for L0PG55 as seed ortholog is 100%.

Group of orthologs #218. Best score 488 bits
Score difference with first non-orthologous sequence - A.carolinensis:47 P.jiroveci:488

H9GEM1              	100.00%		L0PA75              	100.00%
Bootstrap support for H9GEM1 as seed ortholog is 91%.
Bootstrap support for L0PA75 as seed ortholog is 100%.

Group of orthologs #219. Best score 486 bits
Score difference with first non-orthologous sequence - A.carolinensis:286 P.jiroveci:486

G1KR13              	100.00%		L0P7Y5              	100.00%
Bootstrap support for G1KR13 as seed ortholog is 100%.
Bootstrap support for L0P7Y5 as seed ortholog is 100%.

Group of orthologs #220. Best score 485 bits
Score difference with first non-orthologous sequence - A.carolinensis:485 P.jiroveci:485

G1KGH9              	100.00%		L0PB35              	100.00%
Bootstrap support for G1KGH9 as seed ortholog is 100%.
Bootstrap support for L0PB35 as seed ortholog is 100%.

Group of orthologs #221. Best score 481 bits
Score difference with first non-orthologous sequence - A.carolinensis:481 P.jiroveci:481

G1K9S9              	100.00%		L0PAC4              	100.00%
                    	       		L0P871              	98.19%
Bootstrap support for G1K9S9 as seed ortholog is 100%.
Bootstrap support for L0PAC4 as seed ortholog is 100%.

Group of orthologs #222. Best score 479 bits
Score difference with first non-orthologous sequence - A.carolinensis:234 P.jiroveci:379

G1KA24              	100.00%		L0PC38              	100.00%
Bootstrap support for G1KA24 as seed ortholog is 100%.
Bootstrap support for L0PC38 as seed ortholog is 100%.

Group of orthologs #223. Best score 479 bits
Score difference with first non-orthologous sequence - A.carolinensis:479 P.jiroveci:267

G1KN02              	100.00%		L0PED9              	100.00%
Bootstrap support for G1KN02 as seed ortholog is 100%.
Bootstrap support for L0PED9 as seed ortholog is 100%.

Group of orthologs #224. Best score 477 bits
Score difference with first non-orthologous sequence - A.carolinensis:119 P.jiroveci:133

H9G4C5              	100.00%		L0P6T3              	100.00%
Bootstrap support for H9G4C5 as seed ortholog is 99%.
Bootstrap support for L0P6T3 as seed ortholog is 99%.

Group of orthologs #225. Best score 475 bits
Score difference with first non-orthologous sequence - A.carolinensis:475 P.jiroveci:475

G1KMX9              	100.00%		L0PCY5              	100.00%
Bootstrap support for G1KMX9 as seed ortholog is 100%.
Bootstrap support for L0PCY5 as seed ortholog is 100%.

Group of orthologs #226. Best score 475 bits
Score difference with first non-orthologous sequence - A.carolinensis:475 P.jiroveci:475

G1KT22              	100.00%		L0PDC9              	100.00%
Bootstrap support for G1KT22 as seed ortholog is 100%.
Bootstrap support for L0PDC9 as seed ortholog is 100%.

Group of orthologs #227. Best score 470 bits
Score difference with first non-orthologous sequence - A.carolinensis:470 P.jiroveci:470

H9GJW8              	100.00%		L0PFC2              	100.00%
Bootstrap support for H9GJW8 as seed ortholog is 100%.
Bootstrap support for L0PFC2 as seed ortholog is 100%.

Group of orthologs #228. Best score 469 bits
Score difference with first non-orthologous sequence - A.carolinensis:372 P.jiroveci:469

H9GP54              	100.00%		L0PCS3              	100.00%
Bootstrap support for H9GP54 as seed ortholog is 100%.
Bootstrap support for L0PCS3 as seed ortholog is 100%.

Group of orthologs #229. Best score 468 bits
Score difference with first non-orthologous sequence - A.carolinensis:415 P.jiroveci:468

G1KEX2              	100.00%		L0P9C8              	100.00%
Bootstrap support for G1KEX2 as seed ortholog is 100%.
Bootstrap support for L0P9C8 as seed ortholog is 100%.

Group of orthologs #230. Best score 468 bits
Score difference with first non-orthologous sequence - A.carolinensis:468 P.jiroveci:468

G1KTL7              	100.00%		L0PER3              	100.00%
Bootstrap support for G1KTL7 as seed ortholog is 100%.
Bootstrap support for L0PER3 as seed ortholog is 100%.

Group of orthologs #231. Best score 468 bits
Score difference with first non-orthologous sequence - A.carolinensis:468 P.jiroveci:468

H9GBE5              	100.00%		L0P921              	100.00%
Bootstrap support for H9GBE5 as seed ortholog is 100%.
Bootstrap support for L0P921 as seed ortholog is 100%.

Group of orthologs #232. Best score 468 bits
Score difference with first non-orthologous sequence - A.carolinensis:340 P.jiroveci:99

H9GLS6              	100.00%		L0PFW2              	100.00%
Bootstrap support for H9GLS6 as seed ortholog is 100%.
Bootstrap support for L0PFW2 as seed ortholog is 99%.

Group of orthologs #233. Best score 467 bits
Score difference with first non-orthologous sequence - A.carolinensis:467 P.jiroveci:467

G1KT84              	100.00%		L0PGH3              	100.00%
H9GE03              	39.55%		
Bootstrap support for G1KT84 as seed ortholog is 100%.
Bootstrap support for L0PGH3 as seed ortholog is 100%.

Group of orthologs #234. Best score 467 bits
Score difference with first non-orthologous sequence - A.carolinensis:467 P.jiroveci:467

G1KMW7              	100.00%		L0PBT8              	100.00%
Bootstrap support for G1KMW7 as seed ortholog is 100%.
Bootstrap support for L0PBT8 as seed ortholog is 100%.

Group of orthologs #235. Best score 467 bits
Score difference with first non-orthologous sequence - A.carolinensis:467 P.jiroveci:467

H9GAJ6              	100.00%		L0PHY6              	100.00%
Bootstrap support for H9GAJ6 as seed ortholog is 100%.
Bootstrap support for L0PHY6 as seed ortholog is 100%.

Group of orthologs #236. Best score 467 bits
Score difference with first non-orthologous sequence - A.carolinensis:467 P.jiroveci:467

H9GL93              	100.00%		L0PCL9              	100.00%
Bootstrap support for H9GL93 as seed ortholog is 100%.
Bootstrap support for L0PCL9 as seed ortholog is 100%.

Group of orthologs #237. Best score 463 bits
Score difference with first non-orthologous sequence - A.carolinensis:334 P.jiroveci:284

G1KEI2              	100.00%		L0P8N1              	100.00%
Bootstrap support for G1KEI2 as seed ortholog is 100%.
Bootstrap support for L0P8N1 as seed ortholog is 100%.

Group of orthologs #238. Best score 463 bits
Score difference with first non-orthologous sequence - A.carolinensis:463 P.jiroveci:463

G1KU87              	100.00%		L0PBV8              	100.00%
Bootstrap support for G1KU87 as seed ortholog is 100%.
Bootstrap support for L0PBV8 as seed ortholog is 100%.

Group of orthologs #239. Best score 460 bits
Score difference with first non-orthologous sequence - A.carolinensis:460 P.jiroveci:460

H9GLE6              	100.00%		L0PBN1              	100.00%
Bootstrap support for H9GLE6 as seed ortholog is 100%.
Bootstrap support for L0PBN1 as seed ortholog is 100%.

Group of orthologs #240. Best score 458 bits
Score difference with first non-orthologous sequence - A.carolinensis:298 P.jiroveci:317

H9G755              	100.00%		L0PDA0              	100.00%
Bootstrap support for H9G755 as seed ortholog is 100%.
Bootstrap support for L0PDA0 as seed ortholog is 100%.

Group of orthologs #241. Best score 457 bits
Score difference with first non-orthologous sequence - A.carolinensis:457 P.jiroveci:457

H9G7T2              	100.00%		L0PFM4              	100.00%
Bootstrap support for H9G7T2 as seed ortholog is 100%.
Bootstrap support for L0PFM4 as seed ortholog is 100%.

Group of orthologs #242. Best score 456 bits
Score difference with first non-orthologous sequence - A.carolinensis:456 P.jiroveci:456

G1KH63              	100.00%		L0PF49              	100.00%
Bootstrap support for G1KH63 as seed ortholog is 100%.
Bootstrap support for L0PF49 as seed ortholog is 100%.

Group of orthologs #243. Best score 455 bits
Score difference with first non-orthologous sequence - A.carolinensis:455 P.jiroveci:455

G1KKI9              	100.00%		L0PC82              	100.00%
H9GFS9              	39.40%		
Bootstrap support for G1KKI9 as seed ortholog is 100%.
Bootstrap support for L0PC82 as seed ortholog is 100%.

Group of orthologs #244. Best score 453 bits
Score difference with first non-orthologous sequence - A.carolinensis:453 P.jiroveci:453

G1KC62              	100.00%		L0P7D2              	100.00%
G1KC31              	11.92%		
H9G7T3              	9.81%		
Bootstrap support for G1KC62 as seed ortholog is 100%.
Bootstrap support for L0P7D2 as seed ortholog is 100%.

Group of orthologs #245. Best score 451 bits
Score difference with first non-orthologous sequence - A.carolinensis:451 P.jiroveci:451

G1KEL4              	100.00%		L0PFR4              	100.00%
H9GN05              	21.00%		
Bootstrap support for G1KEL4 as seed ortholog is 100%.
Bootstrap support for L0PFR4 as seed ortholog is 100%.

Group of orthologs #246. Best score 448 bits
Score difference with first non-orthologous sequence - A.carolinensis:448 P.jiroveci:448

G1KSE7              	100.00%		L0PFZ9              	100.00%
Bootstrap support for G1KSE7 as seed ortholog is 100%.
Bootstrap support for L0PFZ9 as seed ortholog is 100%.

Group of orthologs #247. Best score 448 bits
Score difference with first non-orthologous sequence - A.carolinensis:146 P.jiroveci:448

H9GF12              	100.00%		L0P8R6              	100.00%
Bootstrap support for H9GF12 as seed ortholog is 99%.
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #248. Best score 446 bits
Score difference with first non-orthologous sequence - A.carolinensis:35 P.jiroveci:217

H9G9V0              	100.00%		L0PAW8              	100.00%
Bootstrap support for H9G9V0 as seed ortholog is 70%.
Alternative seed ortholog is G1KR16 (35 bits away from this cluster)
Bootstrap support for L0PAW8 as seed ortholog is 99%.

Group of orthologs #249. Best score 445 bits
Score difference with first non-orthologous sequence - A.carolinensis:267 P.jiroveci:445

H9G9H2              	100.00%		L0P6W8              	100.00%
                    	       		L0PH46              	100.00%
Bootstrap support for H9G9H2 as seed ortholog is 100%.
Bootstrap support for L0P6W8 as seed ortholog is 100%.
Bootstrap support for L0PH46 as seed ortholog is 100%.

Group of orthologs #250. Best score 445 bits
Score difference with first non-orthologous sequence - A.carolinensis:445 P.jiroveci:445

G1KJR2              	100.00%		L0PG96              	100.00%
Bootstrap support for G1KJR2 as seed ortholog is 100%.
Bootstrap support for L0PG96 as seed ortholog is 100%.

Group of orthologs #251. Best score 443 bits
Score difference with first non-orthologous sequence - A.carolinensis:180 P.jiroveci:443

G1KCQ3              	100.00%		L0PCE9              	100.00%
Bootstrap support for G1KCQ3 as seed ortholog is 99%.
Bootstrap support for L0PCE9 as seed ortholog is 100%.

Group of orthologs #252. Best score 441 bits
Score difference with first non-orthologous sequence - A.carolinensis:441 P.jiroveci:441

H9GAV9              	100.00%		L0P6R7              	100.00%
Bootstrap support for H9GAV9 as seed ortholog is 100%.
Bootstrap support for L0P6R7 as seed ortholog is 100%.

Group of orthologs #253. Best score 440 bits
Score difference with first non-orthologous sequence - A.carolinensis:440 P.jiroveci:440

G1KHL5              	100.00%		L0P6T8              	100.00%
H9G7W7              	56.06%		
Bootstrap support for G1KHL5 as seed ortholog is 100%.
Bootstrap support for L0P6T8 as seed ortholog is 100%.

Group of orthologs #254. Best score 440 bits
Score difference with first non-orthologous sequence - A.carolinensis:326 P.jiroveci:348

H9GPH4              	100.00%		L0PFE7              	100.00%
Bootstrap support for H9GPH4 as seed ortholog is 100%.
Bootstrap support for L0PFE7 as seed ortholog is 100%.

Group of orthologs #255. Best score 439 bits
Score difference with first non-orthologous sequence - A.carolinensis:104 P.jiroveci:342

H9GB13              	100.00%		L0PGV4              	100.00%
H9G8G9              	46.84%		
Bootstrap support for H9GB13 as seed ortholog is 99%.
Bootstrap support for L0PGV4 as seed ortholog is 100%.

Group of orthologs #256. Best score 438 bits
Score difference with first non-orthologous sequence - A.carolinensis:270 P.jiroveci:346

H9GNX6              	100.00%		L0PAL3              	100.00%
G1KG81              	38.32%		
G1KHN8              	25.69%		
Bootstrap support for H9GNX6 as seed ortholog is 100%.
Bootstrap support for L0PAL3 as seed ortholog is 100%.

Group of orthologs #257. Best score 436 bits
Score difference with first non-orthologous sequence - A.carolinensis:37 P.jiroveci:436

G1KM02              	100.00%		L0PDJ1              	100.00%
H9GL00              	27.81%		
Bootstrap support for G1KM02 as seed ortholog is 77%.
Bootstrap support for L0PDJ1 as seed ortholog is 100%.

Group of orthologs #258. Best score 436 bits
Score difference with first non-orthologous sequence - A.carolinensis:436 P.jiroveci:436

G1KTQ4              	100.00%		L0P9C9              	100.00%
Bootstrap support for G1KTQ4 as seed ortholog is 100%.
Bootstrap support for L0P9C9 as seed ortholog is 100%.

Group of orthologs #259. Best score 436 bits
Score difference with first non-orthologous sequence - A.carolinensis:436 P.jiroveci:436

H9GHQ2              	100.00%		L0PEE3              	100.00%
Bootstrap support for H9GHQ2 as seed ortholog is 100%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #260. Best score 435 bits
Score difference with first non-orthologous sequence - A.carolinensis:26 P.jiroveci:290

H9G8C8              	100.00%		L0P9H5              	100.00%
G1KFF4              	39.22%		L0P8S4              	54.09%
G1KHZ5              	13.60%		
H9GNA6              	10.54%		
H9G4Z4              	10.29%		
Bootstrap support for H9G8C8 as seed ortholog is 94%.
Bootstrap support for L0P9H5 as seed ortholog is 100%.

Group of orthologs #261. Best score 434 bits
Score difference with first non-orthologous sequence - A.carolinensis:263 P.jiroveci:434

G1KKF5              	100.00%		L0PHE4              	100.00%
G1KB09              	74.06%		
Bootstrap support for G1KKF5 as seed ortholog is 100%.
Bootstrap support for L0PHE4 as seed ortholog is 100%.

Group of orthologs #262. Best score 433 bits
Score difference with first non-orthologous sequence - A.carolinensis:125 P.jiroveci:433

G1KIE4              	100.00%		L0PGN1              	100.00%
L7MZU7              	55.56%		
Bootstrap support for G1KIE4 as seed ortholog is 99%.
Bootstrap support for L0PGN1 as seed ortholog is 100%.

Group of orthologs #263. Best score 433 bits
Score difference with first non-orthologous sequence - A.carolinensis:433 P.jiroveci:433

G1KLI8              	100.00%		L0PFY1              	100.00%
H9G8Z1              	62.89%		
Bootstrap support for G1KLI8 as seed ortholog is 100%.
Bootstrap support for L0PFY1 as seed ortholog is 100%.

Group of orthologs #264. Best score 432 bits
Score difference with first non-orthologous sequence - A.carolinensis:326 P.jiroveci:432

H9G3J5              	100.00%		L0PAL8              	100.00%
Bootstrap support for H9G3J5 as seed ortholog is 100%.
Bootstrap support for L0PAL8 as seed ortholog is 100%.

Group of orthologs #265. Best score 431 bits
Score difference with first non-orthologous sequence - A.carolinensis:431 P.jiroveci:431

H9GEE9              	100.00%		L0PEX5              	100.00%
Bootstrap support for H9GEE9 as seed ortholog is 100%.
Bootstrap support for L0PEX5 as seed ortholog is 100%.

Group of orthologs #266. Best score 428 bits
Score difference with first non-orthologous sequence - A.carolinensis:428 P.jiroveci:428

G1KMP5              	100.00%		L0PGU0              	100.00%
Bootstrap support for G1KMP5 as seed ortholog is 100%.
Bootstrap support for L0PGU0 as seed ortholog is 100%.

Group of orthologs #267. Best score 427 bits
Score difference with first non-orthologous sequence - A.carolinensis:427 P.jiroveci:427

H9G7U2              	100.00%		L0PAH2              	100.00%
Bootstrap support for H9G7U2 as seed ortholog is 100%.
Bootstrap support for L0PAH2 as seed ortholog is 100%.

Group of orthologs #268. Best score 426 bits
Score difference with first non-orthologous sequence - A.carolinensis:304 P.jiroveci:426

G1KHV5              	100.00%		L0PD24              	100.00%
Bootstrap support for G1KHV5 as seed ortholog is 100%.
Bootstrap support for L0PD24 as seed ortholog is 100%.

Group of orthologs #269. Best score 424 bits
Score difference with first non-orthologous sequence - A.carolinensis:424 P.jiroveci:424

G1KPL7              	100.00%		L0PG82              	100.00%
Bootstrap support for G1KPL7 as seed ortholog is 100%.
Bootstrap support for L0PG82 as seed ortholog is 100%.

Group of orthologs #270. Best score 422 bits
Score difference with first non-orthologous sequence - A.carolinensis:39 P.jiroveci:127

H9GK58              	100.00%		L0PGJ9              	100.00%
Bootstrap support for H9GK58 as seed ortholog is 75%.
Bootstrap support for L0PGJ9 as seed ortholog is 99%.

Group of orthologs #271. Best score 421 bits
Score difference with first non-orthologous sequence - A.carolinensis:421 P.jiroveci:421

G1KY92              	100.00%		L0PBL0              	100.00%
G1KDF1              	26.95%		
Bootstrap support for G1KY92 as seed ortholog is 100%.
Bootstrap support for L0PBL0 as seed ortholog is 100%.

Group of orthologs #272. Best score 421 bits
Score difference with first non-orthologous sequence - A.carolinensis:337 P.jiroveci:421

G1KRB6              	100.00%		L0P7Z6              	100.00%
Bootstrap support for G1KRB6 as seed ortholog is 100%.
Bootstrap support for L0P7Z6 as seed ortholog is 100%.

Group of orthologs #273. Best score 421 bits
Score difference with first non-orthologous sequence - A.carolinensis:421 P.jiroveci:88

H9G5W0              	100.00%		L0PFS3              	100.00%
Bootstrap support for H9G5W0 as seed ortholog is 100%.
Bootstrap support for L0PFS3 as seed ortholog is 99%.

Group of orthologs #274. Best score 420 bits
Score difference with first non-orthologous sequence - A.carolinensis:420 P.jiroveci:420

G1KFD1              	100.00%		L0PF23              	100.00%
Bootstrap support for G1KFD1 as seed ortholog is 100%.
Bootstrap support for L0PF23 as seed ortholog is 100%.

Group of orthologs #275. Best score 420 bits
Score difference with first non-orthologous sequence - A.carolinensis:420 P.jiroveci:420

H9G404              	100.00%		L0PCQ7              	100.00%
Bootstrap support for H9G404 as seed ortholog is 100%.
Bootstrap support for L0PCQ7 as seed ortholog is 100%.

Group of orthologs #276. Best score 419 bits
Score difference with first non-orthologous sequence - A.carolinensis:419 P.jiroveci:419

H9GN49              	100.00%		L0PF52              	100.00%
G1KQ55              	65.59%		
Bootstrap support for H9GN49 as seed ortholog is 100%.
Bootstrap support for L0PF52 as seed ortholog is 100%.

Group of orthologs #277. Best score 419 bits
Score difference with first non-orthologous sequence - A.carolinensis:419 P.jiroveci:419

H9GFJ6              	100.00%		L0P9I4              	100.00%
Bootstrap support for H9GFJ6 as seed ortholog is 100%.
Bootstrap support for L0P9I4 as seed ortholog is 100%.

Group of orthologs #278. Best score 418 bits
Score difference with first non-orthologous sequence - A.carolinensis:418 P.jiroveci:418

G1KHK5              	100.00%		L0PEE4              	100.00%
G1K9N7              	46.95%		
Bootstrap support for G1KHK5 as seed ortholog is 100%.
Bootstrap support for L0PEE4 as seed ortholog is 100%.

Group of orthologs #279. Best score 416 bits
Score difference with first non-orthologous sequence - A.carolinensis:416 P.jiroveci:416

H9G9W9              	100.00%		L0PDM0              	100.00%
H9GCE8              	60.19%		
Bootstrap support for H9G9W9 as seed ortholog is 100%.
Bootstrap support for L0PDM0 as seed ortholog is 100%.

Group of orthologs #280. Best score 416 bits
Score difference with first non-orthologous sequence - A.carolinensis:138 P.jiroveci:416

H9GJI6              	100.00%		L0PFJ5              	100.00%
Bootstrap support for H9GJI6 as seed ortholog is 99%.
Bootstrap support for L0PFJ5 as seed ortholog is 100%.

Group of orthologs #281. Best score 415 bits
Score difference with first non-orthologous sequence - A.carolinensis:415 P.jiroveci:415

G1KCS7              	100.00%		L0P9J7              	100.00%
Bootstrap support for G1KCS7 as seed ortholog is 100%.
Bootstrap support for L0P9J7 as seed ortholog is 100%.

Group of orthologs #282. Best score 414 bits
Score difference with first non-orthologous sequence - A.carolinensis:254 P.jiroveci:414

G1KLD8              	100.00%		L0PDT0              	100.00%
Bootstrap support for G1KLD8 as seed ortholog is 100%.
Bootstrap support for L0PDT0 as seed ortholog is 100%.

Group of orthologs #283. Best score 413 bits
Score difference with first non-orthologous sequence - A.carolinensis:413 P.jiroveci:413

G1K8H8              	100.00%		L0PGA8              	100.00%
Bootstrap support for G1K8H8 as seed ortholog is 100%.
Bootstrap support for L0PGA8 as seed ortholog is 100%.

Group of orthologs #284. Best score 412 bits
Score difference with first non-orthologous sequence - A.carolinensis:412 P.jiroveci:412

H9GPM9              	100.00%		L0P8X3              	100.00%
Bootstrap support for H9GPM9 as seed ortholog is 100%.
Bootstrap support for L0P8X3 as seed ortholog is 100%.

Group of orthologs #285. Best score 411 bits
Score difference with first non-orthologous sequence - A.carolinensis:97 P.jiroveci:5

H9GJL9              	100.00%		L0PAN3              	100.00%
H9G5W4              	53.70%		
G1KSD4              	45.86%		
Bootstrap support for H9GJL9 as seed ortholog is 99%.
Bootstrap support for L0PAN3 as seed ortholog is 73%.
Alternative seed ortholog is L0PE81 (5 bits away from this cluster)

Group of orthologs #286. Best score 411 bits
Score difference with first non-orthologous sequence - A.carolinensis:411 P.jiroveci:411

G1KD96              	100.00%		L0PB32              	100.00%
H9GB92              	55.46%		
Bootstrap support for G1KD96 as seed ortholog is 100%.
Bootstrap support for L0PB32 as seed ortholog is 100%.

Group of orthologs #287. Best score 411 bits
Score difference with first non-orthologous sequence - A.carolinensis:197 P.jiroveci:411

G1KKY7              	100.00%		L0PBF6              	100.00%
G1KFQ1              	52.37%		
Bootstrap support for G1KKY7 as seed ortholog is 100%.
Bootstrap support for L0PBF6 as seed ortholog is 100%.

Group of orthologs #288. Best score 411 bits
Score difference with first non-orthologous sequence - A.carolinensis:411 P.jiroveci:411

G1KGH2              	100.00%		L0P8Z3              	100.00%
Bootstrap support for G1KGH2 as seed ortholog is 100%.
Bootstrap support for L0P8Z3 as seed ortholog is 100%.

Group of orthologs #289. Best score 410 bits
Score difference with first non-orthologous sequence - A.carolinensis:151 P.jiroveci:69

G1K9N8              	100.00%		L0P6V9              	100.00%
Bootstrap support for G1K9N8 as seed ortholog is 100%.
Bootstrap support for L0P6V9 as seed ortholog is 99%.

Group of orthologs #290. Best score 410 bits
Score difference with first non-orthologous sequence - A.carolinensis:410 P.jiroveci:410

H9G3D8              	100.00%		L0PAE9              	100.00%
Bootstrap support for H9G3D8 as seed ortholog is 100%.
Bootstrap support for L0PAE9 as seed ortholog is 100%.

Group of orthologs #291. Best score 410 bits
Score difference with first non-orthologous sequence - A.carolinensis:160 P.jiroveci:410

H9GGH8              	100.00%		L0PA15              	100.00%
Bootstrap support for H9GGH8 as seed ortholog is 99%.
Bootstrap support for L0PA15 as seed ortholog is 100%.

Group of orthologs #292. Best score 409 bits
Score difference with first non-orthologous sequence - A.carolinensis:409 P.jiroveci:352

H9G545              	100.00%		L0P7M4              	100.00%
H9GD50              	24.01%		L0PH62              	50.21%
Bootstrap support for H9G545 as seed ortholog is 100%.
Bootstrap support for L0P7M4 as seed ortholog is 100%.

Group of orthologs #293. Best score 408 bits
Score difference with first non-orthologous sequence - A.carolinensis:408 P.jiroveci:408

G1KSS2              	100.00%		L0PAN7              	100.00%
Bootstrap support for G1KSS2 as seed ortholog is 100%.
Bootstrap support for L0PAN7 as seed ortholog is 100%.

Group of orthologs #294. Best score 408 bits
Score difference with first non-orthologous sequence - A.carolinensis:269 P.jiroveci:408

H9GIA0              	100.00%		L0PCN1              	100.00%
Bootstrap support for H9GIA0 as seed ortholog is 100%.
Bootstrap support for L0PCN1 as seed ortholog is 100%.

Group of orthologs #295. Best score 407 bits
Score difference with first non-orthologous sequence - A.carolinensis:99 P.jiroveci:407

G1KFT1              	100.00%		L0PFB1              	100.00%
G1KJX3              	56.07%		
Bootstrap support for G1KFT1 as seed ortholog is 99%.
Bootstrap support for L0PFB1 as seed ortholog is 100%.

Group of orthologs #296. Best score 406 bits
Score difference with first non-orthologous sequence - A.carolinensis:322 P.jiroveci:406

H9G883              	100.00%		L0PBI2              	100.00%
Bootstrap support for H9G883 as seed ortholog is 100%.
Bootstrap support for L0PBI2 as seed ortholog is 100%.

Group of orthologs #297. Best score 406 bits
Score difference with first non-orthologous sequence - A.carolinensis:128 P.jiroveci:406

H9GD67              	100.00%		L0PCL4              	100.00%
Bootstrap support for H9GD67 as seed ortholog is 99%.
Bootstrap support for L0PCL4 as seed ortholog is 100%.

Group of orthologs #298. Best score 405 bits
Score difference with first non-orthologous sequence - A.carolinensis:405 P.jiroveci:405

G1KP01              	100.00%		L0PE98              	100.00%
G1KQQ1              	11.19%		
Bootstrap support for G1KP01 as seed ortholog is 100%.
Bootstrap support for L0PE98 as seed ortholog is 100%.

Group of orthologs #299. Best score 405 bits
Score difference with first non-orthologous sequence - A.carolinensis:200 P.jiroveci:405

H9GJT7              	100.00%		L0PGJ5              	100.00%
Bootstrap support for H9GJT7 as seed ortholog is 100%.
Bootstrap support for L0PGJ5 as seed ortholog is 100%.

Group of orthologs #300. Best score 405 bits
Score difference with first non-orthologous sequence - A.carolinensis:282 P.jiroveci:405

H9GQK6              	100.00%		L0PCP3              	100.00%
Bootstrap support for H9GQK6 as seed ortholog is 100%.
Bootstrap support for L0PCP3 as seed ortholog is 100%.

Group of orthologs #301. Best score 403 bits
Score difference with first non-orthologous sequence - A.carolinensis:403 P.jiroveci:403

G1KGU2              	100.00%		L0PE52              	100.00%
                    	       		L0PIN5              	49.25%
Bootstrap support for G1KGU2 as seed ortholog is 100%.
Bootstrap support for L0PE52 as seed ortholog is 100%.

Group of orthologs #302. Best score 403 bits
Score difference with first non-orthologous sequence - A.carolinensis:403 P.jiroveci:403

G1KMH2              	100.00%		L0PG48              	100.00%
Bootstrap support for G1KMH2 as seed ortholog is 100%.
Bootstrap support for L0PG48 as seed ortholog is 100%.

Group of orthologs #303. Best score 401 bits
Score difference with first non-orthologous sequence - A.carolinensis:401 P.jiroveci:401

H9G508              	100.00%		L0PAH9              	100.00%
                    	       		L0PAZ7              	29.37%
Bootstrap support for H9G508 as seed ortholog is 100%.
Bootstrap support for L0PAH9 as seed ortholog is 100%.

Group of orthologs #304. Best score 401 bits
Score difference with first non-orthologous sequence - A.carolinensis:4 P.jiroveci:75

H9GA76              	100.00%		L0PAY3              	100.00%
G1KH44              	35.85%		
Bootstrap support for H9GA76 as seed ortholog is 53%.
Alternative seed ortholog is H9GH90 (4 bits away from this cluster)
Bootstrap support for L0PAY3 as seed ortholog is 99%.

Group of orthologs #305. Best score 401 bits
Score difference with first non-orthologous sequence - A.carolinensis:401 P.jiroveci:401

H9GDW2              	100.00%		L0PI13              	100.00%
H9G7I9              	38.83%		
Bootstrap support for H9GDW2 as seed ortholog is 100%.
Bootstrap support for L0PI13 as seed ortholog is 100%.

Group of orthologs #306. Best score 401 bits
Score difference with first non-orthologous sequence - A.carolinensis:233 P.jiroveci:401

H9GNJ6              	100.00%		L0PEA7              	100.00%
Bootstrap support for H9GNJ6 as seed ortholog is 99%.
Bootstrap support for L0PEA7 as seed ortholog is 100%.

Group of orthologs #307. Best score 400 bits
Score difference with first non-orthologous sequence - A.carolinensis:178 P.jiroveci:400

G1KSE2              	100.00%		L0P702              	100.00%
G1KAL5              	39.91%		
Bootstrap support for G1KSE2 as seed ortholog is 99%.
Bootstrap support for L0P702 as seed ortholog is 100%.

Group of orthologs #308. Best score 400 bits
Score difference with first non-orthologous sequence - A.carolinensis:330 P.jiroveci:400

H9GMS9              	100.00%		L0PCT5              	100.00%
Bootstrap support for H9GMS9 as seed ortholog is 100%.
Bootstrap support for L0PCT5 as seed ortholog is 100%.

Group of orthologs #309. Best score 399 bits
Score difference with first non-orthologous sequence - A.carolinensis:399 P.jiroveci:399

G1KBN1              	100.00%		L0PAB3              	100.00%
Bootstrap support for G1KBN1 as seed ortholog is 100%.
Bootstrap support for L0PAB3 as seed ortholog is 100%.

Group of orthologs #310. Best score 399 bits
Score difference with first non-orthologous sequence - A.carolinensis:399 P.jiroveci:399

G1KSG6              	100.00%		L0PCV8              	100.00%
Bootstrap support for G1KSG6 as seed ortholog is 100%.
Bootstrap support for L0PCV8 as seed ortholog is 100%.

Group of orthologs #311. Best score 399 bits
Score difference with first non-orthologous sequence - A.carolinensis:399 P.jiroveci:399

H9G967              	100.00%		L0PCP1              	100.00%
Bootstrap support for H9G967 as seed ortholog is 100%.
Bootstrap support for L0PCP1 as seed ortholog is 100%.

Group of orthologs #312. Best score 398 bits
Score difference with first non-orthologous sequence - A.carolinensis:188 P.jiroveci:398

H9G4X7              	100.00%		L0PBM9              	100.00%
Bootstrap support for H9G4X7 as seed ortholog is 99%.
Bootstrap support for L0PBM9 as seed ortholog is 100%.

Group of orthologs #313. Best score 398 bits
Score difference with first non-orthologous sequence - A.carolinensis:136 P.jiroveci:398

H9GIU3              	100.00%		L0PG07              	100.00%
Bootstrap support for H9GIU3 as seed ortholog is 99%.
Bootstrap support for L0PG07 as seed ortholog is 100%.

Group of orthologs #314. Best score 396 bits
Score difference with first non-orthologous sequence - A.carolinensis:396 P.jiroveci:396

G1KFX0              	100.00%		L0PEY9              	100.00%
Bootstrap support for G1KFX0 as seed ortholog is 100%.
Bootstrap support for L0PEY9 as seed ortholog is 100%.

Group of orthologs #315. Best score 395 bits
Score difference with first non-orthologous sequence - A.carolinensis:395 P.jiroveci:395

H9GFZ2              	100.00%		L0PIC6              	100.00%
Bootstrap support for H9GFZ2 as seed ortholog is 100%.
Bootstrap support for L0PIC6 as seed ortholog is 100%.

Group of orthologs #316. Best score 394 bits
Score difference with first non-orthologous sequence - A.carolinensis:274 P.jiroveci:299

H9GM00              	100.00%		L0PA57              	100.00%
Bootstrap support for H9GM00 as seed ortholog is 100%.
Bootstrap support for L0PA57 as seed ortholog is 100%.

Group of orthologs #317. Best score 392 bits
Score difference with first non-orthologous sequence - A.carolinensis:392 P.jiroveci:192

G1KLB3              	100.00%		L0PBH6              	100.00%
G1KI97              	58.94%		
G1KE05              	54.69%		
H9GKB9              	46.37%		
Bootstrap support for G1KLB3 as seed ortholog is 100%.
Bootstrap support for L0PBH6 as seed ortholog is 100%.

Group of orthologs #318. Best score 391 bits
Score difference with first non-orthologous sequence - A.carolinensis:391 P.jiroveci:391

H9GAA9              	100.00%		L0P961              	100.00%
H9GGA9              	84.75%		
H9GE13              	78.85%		
G1KBC2              	67.71%		
Bootstrap support for H9GAA9 as seed ortholog is 100%.
Bootstrap support for L0P961 as seed ortholog is 100%.

Group of orthologs #319. Best score 390 bits
Score difference with first non-orthologous sequence - A.carolinensis:298 P.jiroveci:390

G1KFE6              	100.00%		L0PB23              	100.00%
Bootstrap support for G1KFE6 as seed ortholog is 100%.
Bootstrap support for L0PB23 as seed ortholog is 100%.

Group of orthologs #320. Best score 388 bits
Score difference with first non-orthologous sequence - A.carolinensis:171 P.jiroveci:67

G1KPR4              	100.00%		L0PA13              	100.00%
Bootstrap support for G1KPR4 as seed ortholog is 99%.
Bootstrap support for L0PA13 as seed ortholog is 89%.

Group of orthologs #321. Best score 388 bits
Score difference with first non-orthologous sequence - A.carolinensis:388 P.jiroveci:388

H9G3X3              	100.00%		L0PHJ7              	100.00%
Bootstrap support for H9G3X3 as seed ortholog is 100%.
Bootstrap support for L0PHJ7 as seed ortholog is 100%.

Group of orthologs #322. Best score 387 bits
Score difference with first non-orthologous sequence - A.carolinensis:258 P.jiroveci:295

G1KFG6              	100.00%		L0PBY2              	100.00%
G1K8X8              	35.17%		
Bootstrap support for G1KFG6 as seed ortholog is 100%.
Bootstrap support for L0PBY2 as seed ortholog is 100%.

Group of orthologs #323. Best score 387 bits
Score difference with first non-orthologous sequence - A.carolinensis:387 P.jiroveci:387

G1KUJ6              	100.00%		L0PID0              	100.00%
H9GEU2              	88.41%		
Bootstrap support for G1KUJ6 as seed ortholog is 100%.
Bootstrap support for L0PID0 as seed ortholog is 100%.

Group of orthologs #324. Best score 386 bits
Score difference with first non-orthologous sequence - A.carolinensis:386 P.jiroveci:386

H9G7U9              	100.00%		L0PB96              	100.00%
Bootstrap support for H9G7U9 as seed ortholog is 100%.
Bootstrap support for L0PB96 as seed ortholog is 100%.

Group of orthologs #325. Best score 384 bits
Score difference with first non-orthologous sequence - A.carolinensis:384 P.jiroveci:384

H9G531              	100.00%		L0PAM5              	100.00%
H9GP15              	27.28%		
Bootstrap support for H9G531 as seed ortholog is 100%.
Bootstrap support for L0PAM5 as seed ortholog is 100%.

Group of orthologs #326. Best score 384 bits
Score difference with first non-orthologous sequence - A.carolinensis:316 P.jiroveci:279

H9GGR3              	100.00%		L0P7T8              	100.00%
Bootstrap support for H9GGR3 as seed ortholog is 100%.
Bootstrap support for L0P7T8 as seed ortholog is 100%.

Group of orthologs #327. Best score 384 bits
Score difference with first non-orthologous sequence - A.carolinensis:320 P.jiroveci:384

H9GG41              	100.00%		L0PFD9              	100.00%
Bootstrap support for H9GG41 as seed ortholog is 100%.
Bootstrap support for L0PFD9 as seed ortholog is 100%.

Group of orthologs #328. Best score 383 bits
Score difference with first non-orthologous sequence - A.carolinensis:383 P.jiroveci:383

H9GB07              	100.00%		L0PB68              	100.00%
Bootstrap support for H9GB07 as seed ortholog is 100%.
Bootstrap support for L0PB68 as seed ortholog is 100%.

Group of orthologs #329. Best score 382 bits
Score difference with first non-orthologous sequence - A.carolinensis:382 P.jiroveci:123

G1KGR0              	100.00%		L0PD82              	100.00%
Bootstrap support for G1KGR0 as seed ortholog is 100%.
Bootstrap support for L0PD82 as seed ortholog is 99%.

Group of orthologs #330. Best score 381 bits
Score difference with first non-orthologous sequence - A.carolinensis:61 P.jiroveci:220

H9G541              	100.00%		L0P9Z0              	100.00%
H9GLX1              	78.63%		
Bootstrap support for H9G541 as seed ortholog is 94%.
Bootstrap support for L0P9Z0 as seed ortholog is 100%.

Group of orthologs #331. Best score 381 bits
Score difference with first non-orthologous sequence - A.carolinensis:381 P.jiroveci:381

G1KM76              	100.00%		L0P9B4              	100.00%
Bootstrap support for G1KM76 as seed ortholog is 100%.
Bootstrap support for L0P9B4 as seed ortholog is 100%.

Group of orthologs #332. Best score 381 bits
Score difference with first non-orthologous sequence - A.carolinensis:292 P.jiroveci:381

G1KHF6              	100.00%		L0PFP2              	100.00%
Bootstrap support for G1KHF6 as seed ortholog is 100%.
Bootstrap support for L0PFP2 as seed ortholog is 100%.

Group of orthologs #333. Best score 381 bits
Score difference with first non-orthologous sequence - A.carolinensis:381 P.jiroveci:381

H9GC51              	100.00%		L0PFP6              	100.00%
Bootstrap support for H9GC51 as seed ortholog is 100%.
Bootstrap support for L0PFP6 as seed ortholog is 100%.

Group of orthologs #334. Best score 379 bits
Score difference with first non-orthologous sequence - A.carolinensis:379 P.jiroveci:379

H9GQB6              	100.00%		L0PFQ8              	100.00%
Bootstrap support for H9GQB6 as seed ortholog is 100%.
Bootstrap support for L0PFQ8 as seed ortholog is 100%.

Group of orthologs #335. Best score 378 bits
Score difference with first non-orthologous sequence - A.carolinensis:378 P.jiroveci:378

H9G9N8              	100.00%		L0PBA9              	100.00%
H9GK05              	47.02%		
H9G7S6              	30.11%		
Bootstrap support for H9G9N8 as seed ortholog is 100%.
Bootstrap support for L0PBA9 as seed ortholog is 100%.

Group of orthologs #336. Best score 377 bits
Score difference with first non-orthologous sequence - A.carolinensis:97 P.jiroveci:21

G1KSP2              	100.00%		L0PCW4              	100.00%
H9GFA4              	47.94%		
G1K945              	43.24%		
Bootstrap support for G1KSP2 as seed ortholog is 99%.
Bootstrap support for L0PCW4 as seed ortholog is 75%.

Group of orthologs #337. Best score 377 bits
Score difference with first non-orthologous sequence - A.carolinensis:253 P.jiroveci:254

H9GBX5              	100.00%		L0P7Z7              	100.00%
Bootstrap support for H9GBX5 as seed ortholog is 100%.
Bootstrap support for L0P7Z7 as seed ortholog is 100%.

Group of orthologs #338. Best score 377 bits
Score difference with first non-orthologous sequence - A.carolinensis:377 P.jiroveci:377

H9GK11              	100.00%		L0PA23              	100.00%
Bootstrap support for H9GK11 as seed ortholog is 100%.
Bootstrap support for L0PA23 as seed ortholog is 100%.

Group of orthologs #339. Best score 376 bits
Score difference with first non-orthologous sequence - A.carolinensis:255 P.jiroveci:376

G1KLW0              	100.00%		L0PDQ3              	100.00%
G1KSS5              	68.38%		
Bootstrap support for G1KLW0 as seed ortholog is 100%.
Bootstrap support for L0PDQ3 as seed ortholog is 100%.

Group of orthologs #340. Best score 375 bits
Score difference with first non-orthologous sequence - A.carolinensis:28 P.jiroveci:375

H9G782              	100.00%		L0PH29              	100.00%
H9GC86              	53.58%		
Bootstrap support for H9G782 as seed ortholog is 82%.
Bootstrap support for L0PH29 as seed ortholog is 100%.

Group of orthologs #341. Best score 374 bits
Score difference with first non-orthologous sequence - A.carolinensis:374 P.jiroveci:374

G1KGM0              	100.00%		L0PCR5              	100.00%
G1KSL0              	52.66%		L0P9C2              	56.61%
Bootstrap support for G1KGM0 as seed ortholog is 100%.
Bootstrap support for L0PCR5 as seed ortholog is 100%.

Group of orthologs #342. Best score 374 bits
Score difference with first non-orthologous sequence - A.carolinensis:290 P.jiroveci:374

H9GNJ9              	100.00%		L0PG01              	100.00%
H9GIT1              	35.40%		L0P7J0              	81.79%
Bootstrap support for H9GNJ9 as seed ortholog is 100%.
Bootstrap support for L0PG01 as seed ortholog is 100%.

Group of orthologs #343. Best score 373 bits
Score difference with first non-orthologous sequence - A.carolinensis:373 P.jiroveci:373

G1KAW7              	100.00%		L0PGF5              	100.00%
Bootstrap support for G1KAW7 as seed ortholog is 100%.
Bootstrap support for L0PGF5 as seed ortholog is 100%.

Group of orthologs #344. Best score 373 bits
Score difference with first non-orthologous sequence - A.carolinensis:181 P.jiroveci:373

H9G473              	100.00%		L0PE19              	100.00%
Bootstrap support for H9G473 as seed ortholog is 100%.
Bootstrap support for L0PE19 as seed ortholog is 100%.

Group of orthologs #345. Best score 373 bits
Score difference with first non-orthologous sequence - A.carolinensis:43 P.jiroveci:373

H9GJP1              	100.00%		L0P9Y8              	100.00%
Bootstrap support for H9GJP1 as seed ortholog is 83%.
Bootstrap support for L0P9Y8 as seed ortholog is 100%.

Group of orthologs #346. Best score 372 bits
Score difference with first non-orthologous sequence - A.carolinensis:189 P.jiroveci:372

H9GLA0              	100.00%		L0P7X9              	100.00%
H9GUU0              	35.73%		L0PBE2              	80.72%
G1KKL8              	7.11%		
Bootstrap support for H9GLA0 as seed ortholog is 99%.
Bootstrap support for L0P7X9 as seed ortholog is 100%.

Group of orthologs #347. Best score 372 bits
Score difference with first non-orthologous sequence - A.carolinensis:372 P.jiroveci:372

H9GL61              	100.00%		L0P958              	100.00%
Bootstrap support for H9GL61 as seed ortholog is 100%.
Bootstrap support for L0P958 as seed ortholog is 100%.

Group of orthologs #348. Best score 371 bits
Score difference with first non-orthologous sequence - A.carolinensis:116 P.jiroveci:134

H9G7C1              	100.00%		L0PBU4              	100.00%
G1KGA8              	70.35%		
H9GCA9              	67.01%		
Bootstrap support for H9G7C1 as seed ortholog is 100%.
Bootstrap support for L0PBU4 as seed ortholog is 99%.

Group of orthologs #349. Best score 371 bits
Score difference with first non-orthologous sequence - A.carolinensis:371 P.jiroveci:371

G1KIH6              	100.00%		L0P6U2              	100.00%
Bootstrap support for G1KIH6 as seed ortholog is 100%.
Bootstrap support for L0P6U2 as seed ortholog is 100%.

Group of orthologs #350. Best score 371 bits
Score difference with first non-orthologous sequence - A.carolinensis:371 P.jiroveci:371

H9GIX0              	100.00%		L0PEI4              	100.00%
Bootstrap support for H9GIX0 as seed ortholog is 100%.
Bootstrap support for L0PEI4 as seed ortholog is 100%.

Group of orthologs #351. Best score 371 bits
Score difference with first non-orthologous sequence - A.carolinensis:371 P.jiroveci:371

H9GMX6              	100.00%		L0PB18              	100.00%
Bootstrap support for H9GMX6 as seed ortholog is 100%.
Bootstrap support for L0PB18 as seed ortholog is 100%.

Group of orthologs #352. Best score 369 bits
Score difference with first non-orthologous sequence - A.carolinensis:369 P.jiroveci:369

H9GBR4              	100.00%		L0PDS0              	100.00%
Bootstrap support for H9GBR4 as seed ortholog is 100%.
Bootstrap support for L0PDS0 as seed ortholog is 100%.

Group of orthologs #353. Best score 367 bits
Score difference with first non-orthologous sequence - A.carolinensis:367 P.jiroveci:367

G1KH40              	100.00%		L0PCB2              	100.00%
Bootstrap support for G1KH40 as seed ortholog is 100%.
Bootstrap support for L0PCB2 as seed ortholog is 100%.

Group of orthologs #354. Best score 367 bits
Score difference with first non-orthologous sequence - A.carolinensis:367 P.jiroveci:196

G1KVL1              	100.00%		L0PAU1              	100.00%
Bootstrap support for G1KVL1 as seed ortholog is 100%.
Bootstrap support for L0PAU1 as seed ortholog is 99%.

Group of orthologs #355. Best score 365 bits
Score difference with first non-orthologous sequence - A.carolinensis:257 P.jiroveci:310

G1KQB6              	100.00%		L0PI36              	100.00%
Bootstrap support for G1KQB6 as seed ortholog is 100%.
Bootstrap support for L0PI36 as seed ortholog is 100%.

Group of orthologs #356. Best score 365 bits
Score difference with first non-orthologous sequence - A.carolinensis:365 P.jiroveci:365

H9G5X6              	100.00%		L0PC90              	100.00%
Bootstrap support for H9G5X6 as seed ortholog is 100%.
Bootstrap support for L0PC90 as seed ortholog is 100%.

Group of orthologs #357. Best score 365 bits
Score difference with first non-orthologous sequence - A.carolinensis:365 P.jiroveci:365

H9GIE0              	100.00%		L0P9K9              	100.00%
Bootstrap support for H9GIE0 as seed ortholog is 100%.
Bootstrap support for L0P9K9 as seed ortholog is 100%.

Group of orthologs #358. Best score 364 bits
Score difference with first non-orthologous sequence - A.carolinensis:364 P.jiroveci:364

H9GE45              	100.00%		L0PDM3              	100.00%
Bootstrap support for H9GE45 as seed ortholog is 100%.
Bootstrap support for L0PDM3 as seed ortholog is 100%.

Group of orthologs #359. Best score 363 bits
Score difference with first non-orthologous sequence - A.carolinensis:240 P.jiroveci:363

G1KE75              	100.00%		L0PG24              	100.00%
Bootstrap support for G1KE75 as seed ortholog is 100%.
Bootstrap support for L0PG24 as seed ortholog is 100%.

Group of orthologs #360. Best score 363 bits
Score difference with first non-orthologous sequence - A.carolinensis:227 P.jiroveci:363

H9G8S3              	100.00%		L0PHI3              	100.00%
Bootstrap support for H9G8S3 as seed ortholog is 100%.
Bootstrap support for L0PHI3 as seed ortholog is 100%.

Group of orthologs #361. Best score 363 bits
Score difference with first non-orthologous sequence - A.carolinensis:295 P.jiroveci:363

H9GDH5              	100.00%		L0PIR9              	100.00%
Bootstrap support for H9GDH5 as seed ortholog is 100%.
Bootstrap support for L0PIR9 as seed ortholog is 100%.

Group of orthologs #362. Best score 362 bits
Score difference with first non-orthologous sequence - A.carolinensis:362 P.jiroveci:362

G1KCN8              	100.00%		L0PCT6              	100.00%
G1KBT6              	70.61%		
Bootstrap support for G1KCN8 as seed ortholog is 100%.
Bootstrap support for L0PCT6 as seed ortholog is 100%.

Group of orthologs #363. Best score 361 bits
Score difference with first non-orthologous sequence - A.carolinensis:305 P.jiroveci:361

G1KPY9              	100.00%		L0PEX9              	100.00%
H9GNU7              	51.31%		
Bootstrap support for G1KPY9 as seed ortholog is 100%.
Bootstrap support for L0PEX9 as seed ortholog is 100%.

Group of orthologs #364. Best score 361 bits
Score difference with first non-orthologous sequence - A.carolinensis:308 P.jiroveci:361

H9GHX9              	100.00%		L0PDF2              	100.00%
H9GHC6              	32.06%		
Bootstrap support for H9GHX9 as seed ortholog is 100%.
Bootstrap support for L0PDF2 as seed ortholog is 100%.

Group of orthologs #365. Best score 361 bits
Score difference with first non-orthologous sequence - A.carolinensis:252 P.jiroveci:361

G1KCC9              	100.00%		L0P7P4              	100.00%
Bootstrap support for G1KCC9 as seed ortholog is 100%.
Bootstrap support for L0P7P4 as seed ortholog is 100%.

Group of orthologs #366. Best score 361 bits
Score difference with first non-orthologous sequence - A.carolinensis:361 P.jiroveci:361

H9GL04              	100.00%		L0PEK9              	100.00%
Bootstrap support for H9GL04 as seed ortholog is 100%.
Bootstrap support for L0PEK9 as seed ortholog is 100%.

Group of orthologs #367. Best score 359 bits
Score difference with first non-orthologous sequence - A.carolinensis:359 P.jiroveci:359

G1KTQ6              	100.00%		L0PBE9              	100.00%
Bootstrap support for G1KTQ6 as seed ortholog is 100%.
Bootstrap support for L0PBE9 as seed ortholog is 100%.

Group of orthologs #368. Best score 358 bits
Score difference with first non-orthologous sequence - A.carolinensis:358 P.jiroveci:358

G1KGY6              	100.00%		L0P8R8              	100.00%
Bootstrap support for G1KGY6 as seed ortholog is 100%.
Bootstrap support for L0P8R8 as seed ortholog is 100%.

Group of orthologs #369. Best score 357 bits
Score difference with first non-orthologous sequence - A.carolinensis:265 P.jiroveci:357

H9GNP1              	100.00%		L0PD17              	100.00%
G1KCI7              	42.64%		
Bootstrap support for H9GNP1 as seed ortholog is 100%.
Bootstrap support for L0PD17 as seed ortholog is 100%.

Group of orthologs #370. Best score 356 bits
Score difference with first non-orthologous sequence - A.carolinensis:32 P.jiroveci:76

H9GEI7              	100.00%		L0PFY3              	100.00%
Bootstrap support for H9GEI7 as seed ortholog is 73%.
Alternative seed ortholog is H9GBU7 (32 bits away from this cluster)
Bootstrap support for L0PFY3 as seed ortholog is 96%.

Group of orthologs #371. Best score 355 bits
Score difference with first non-orthologous sequence - A.carolinensis:355 P.jiroveci:355

G1KU18              	100.00%		L0PBX2              	100.00%
Bootstrap support for G1KU18 as seed ortholog is 100%.
Bootstrap support for L0PBX2 as seed ortholog is 100%.

Group of orthologs #372. Best score 355 bits
Score difference with first non-orthologous sequence - A.carolinensis:70 P.jiroveci:355

H9G437              	100.00%		L0PG34              	100.00%
Bootstrap support for H9G437 as seed ortholog is 94%.
Bootstrap support for L0PG34 as seed ortholog is 100%.

Group of orthologs #373. Best score 354 bits
Score difference with first non-orthologous sequence - A.carolinensis:354 P.jiroveci:354

G1K8W3              	100.00%		L0PAI0              	100.00%
Bootstrap support for G1K8W3 as seed ortholog is 100%.
Bootstrap support for L0PAI0 as seed ortholog is 100%.

Group of orthologs #374. Best score 353 bits
Score difference with first non-orthologous sequence - A.carolinensis:353 P.jiroveci:353

G1K9D1              	100.00%		L0PES3              	100.00%
Bootstrap support for G1K9D1 as seed ortholog is 100%.
Bootstrap support for L0PES3 as seed ortholog is 100%.

Group of orthologs #375. Best score 353 bits
Score difference with first non-orthologous sequence - A.carolinensis:221 P.jiroveci:353

H9GEG0              	100.00%		L0PA88              	100.00%
Bootstrap support for H9GEG0 as seed ortholog is 100%.
Bootstrap support for L0PA88 as seed ortholog is 100%.

Group of orthologs #376. Best score 352 bits
Score difference with first non-orthologous sequence - A.carolinensis:352 P.jiroveci:264

G1KR37              	100.00%		L0P8W4              	100.00%
Bootstrap support for G1KR37 as seed ortholog is 100%.
Bootstrap support for L0P8W4 as seed ortholog is 100%.

Group of orthologs #377. Best score 352 bits
Score difference with first non-orthologous sequence - A.carolinensis:106 P.jiroveci:121

G1KSN0              	100.00%		L0PF10              	100.00%
Bootstrap support for G1KSN0 as seed ortholog is 99%.
Bootstrap support for L0PF10 as seed ortholog is 99%.

Group of orthologs #378. Best score 352 bits
Score difference with first non-orthologous sequence - A.carolinensis:150 P.jiroveci:352

H9G4A1              	100.00%		L0PD18              	100.00%
Bootstrap support for H9G4A1 as seed ortholog is 99%.
Bootstrap support for L0PD18 as seed ortholog is 100%.

Group of orthologs #379. Best score 351 bits
Score difference with first non-orthologous sequence - A.carolinensis:176 P.jiroveci:351

G1KQM3              	100.00%		L0PCW8              	100.00%
Bootstrap support for G1KQM3 as seed ortholog is 99%.
Bootstrap support for L0PCW8 as seed ortholog is 100%.

Group of orthologs #380. Best score 351 bits
Score difference with first non-orthologous sequence - A.carolinensis:351 P.jiroveci:351

H9G5M5              	100.00%		L0PAC7              	100.00%
Bootstrap support for H9G5M5 as seed ortholog is 100%.
Bootstrap support for L0PAC7 as seed ortholog is 100%.

Group of orthologs #381. Best score 351 bits
Score difference with first non-orthologous sequence - A.carolinensis:290 P.jiroveci:351

H9GD75              	100.00%		L0PGT9              	100.00%
Bootstrap support for H9GD75 as seed ortholog is 100%.
Bootstrap support for L0PGT9 as seed ortholog is 100%.

Group of orthologs #382. Best score 350 bits
Score difference with first non-orthologous sequence - A.carolinensis:350 P.jiroveci:350

H9GJA7              	100.00%		L0P912              	100.00%
                    	       		L0P908              	89.32%
Bootstrap support for H9GJA7 as seed ortholog is 100%.
Bootstrap support for L0P912 as seed ortholog is 100%.

Group of orthologs #383. Best score 349 bits
Score difference with first non-orthologous sequence - A.carolinensis:203 P.jiroveci:115

G1KHY9              	100.00%		L0PBM6              	100.00%
Bootstrap support for G1KHY9 as seed ortholog is 99%.
Bootstrap support for L0PBM6 as seed ortholog is 98%.

Group of orthologs #384. Best score 349 bits
Score difference with first non-orthologous sequence - A.carolinensis:349 P.jiroveci:349

G1KIP5              	100.00%		L0PBP4              	100.00%
Bootstrap support for G1KIP5 as seed ortholog is 100%.
Bootstrap support for L0PBP4 as seed ortholog is 100%.

Group of orthologs #385. Best score 349 bits
Score difference with first non-orthologous sequence - A.carolinensis:349 P.jiroveci:349

H9G5Y1              	100.00%		L0P9S4              	100.00%
Bootstrap support for H9G5Y1 as seed ortholog is 100%.
Bootstrap support for L0P9S4 as seed ortholog is 100%.

Group of orthologs #386. Best score 349 bits
Score difference with first non-orthologous sequence - A.carolinensis:46 P.jiroveci:349

H9GAY0              	100.00%		L0PA09              	100.00%
Bootstrap support for H9GAY0 as seed ortholog is 90%.
Bootstrap support for L0PA09 as seed ortholog is 100%.

Group of orthologs #387. Best score 348 bits
Score difference with first non-orthologous sequence - A.carolinensis:348 P.jiroveci:348

G1KJ03              	100.00%		L0PBC5              	100.00%
H9GFP3              	42.01%		
Bootstrap support for G1KJ03 as seed ortholog is 100%.
Bootstrap support for L0PBC5 as seed ortholog is 100%.

Group of orthologs #388. Best score 348 bits
Score difference with first non-orthologous sequence - A.carolinensis:348 P.jiroveci:348

G1KIR2              	100.00%		L0PF74              	100.00%
Bootstrap support for G1KIR2 as seed ortholog is 100%.
Bootstrap support for L0PF74 as seed ortholog is 100%.

Group of orthologs #389. Best score 348 bits
Score difference with first non-orthologous sequence - A.carolinensis:348 P.jiroveci:348

H9G3F8              	100.00%		L0PBQ1              	100.00%
Bootstrap support for H9G3F8 as seed ortholog is 100%.
Bootstrap support for L0PBQ1 as seed ortholog is 100%.

Group of orthologs #390. Best score 347 bits
Score difference with first non-orthologous sequence - A.carolinensis:347 P.jiroveci:347

H9G591              	100.00%		L0P9B6              	100.00%
Bootstrap support for H9G591 as seed ortholog is 100%.
Bootstrap support for L0P9B6 as seed ortholog is 100%.

Group of orthologs #391. Best score 347 bits
Score difference with first non-orthologous sequence - A.carolinensis:180 P.jiroveci:347

H9G7Q7              	100.00%		L0PEF1              	100.00%
Bootstrap support for H9G7Q7 as seed ortholog is 99%.
Bootstrap support for L0PEF1 as seed ortholog is 100%.

Group of orthologs #392. Best score 347 bits
Score difference with first non-orthologous sequence - A.carolinensis:347 P.jiroveci:347

H9GL71              	100.00%		L0P9K4              	100.00%
Bootstrap support for H9GL71 as seed ortholog is 100%.
Bootstrap support for L0P9K4 as seed ortholog is 100%.

Group of orthologs #393. Best score 346 bits
Score difference with first non-orthologous sequence - A.carolinensis:346 P.jiroveci:346

H9GLA5              	100.00%		L0P8A6              	100.00%
Bootstrap support for H9GLA5 as seed ortholog is 100%.
Bootstrap support for L0P8A6 as seed ortholog is 100%.

Group of orthologs #394. Best score 345 bits
Score difference with first non-orthologous sequence - A.carolinensis:58 P.jiroveci:345

G1KIR5              	100.00%		L0PB24              	100.00%
H9G9N1              	57.55%		
Bootstrap support for G1KIR5 as seed ortholog is 95%.
Bootstrap support for L0PB24 as seed ortholog is 100%.

Group of orthologs #395. Best score 343 bits
Score difference with first non-orthologous sequence - A.carolinensis:294 P.jiroveci:259

G1KPI0              	100.00%		L0P8N0              	100.00%
H9G615              	34.50%		
Bootstrap support for G1KPI0 as seed ortholog is 100%.
Bootstrap support for L0P8N0 as seed ortholog is 100%.

Group of orthologs #396. Best score 342 bits
Score difference with first non-orthologous sequence - A.carolinensis:342 P.jiroveci:208

G1KRP5              	100.00%		L0PAW2              	100.00%
Bootstrap support for G1KRP5 as seed ortholog is 100%.
Bootstrap support for L0PAW2 as seed ortholog is 100%.

Group of orthologs #397. Best score 341 bits
Score difference with first non-orthologous sequence - A.carolinensis:59 P.jiroveci:341

G1KR56              	100.00%		L0PG19              	100.00%
H9GMA9              	9.29%		
Bootstrap support for G1KR56 as seed ortholog is 85%.
Bootstrap support for L0PG19 as seed ortholog is 100%.

Group of orthologs #398. Best score 341 bits
Score difference with first non-orthologous sequence - A.carolinensis:341 P.jiroveci:341

H9G9Y5              	100.00%		L0PBB7              	100.00%
Bootstrap support for H9G9Y5 as seed ortholog is 100%.
Bootstrap support for L0PBB7 as seed ortholog is 100%.

Group of orthologs #399. Best score 339 bits
Score difference with first non-orthologous sequence - A.carolinensis:60 P.jiroveci:339

H9G625              	100.00%		L0PBM5              	100.00%
H9G6X2              	41.45%		
G1KFD0              	40.71%		
Bootstrap support for H9G625 as seed ortholog is 86%.
Bootstrap support for L0PBM5 as seed ortholog is 100%.

Group of orthologs #400. Best score 339 bits
Score difference with first non-orthologous sequence - A.carolinensis:245 P.jiroveci:339

H9GCE5              	100.00%		L0PEF5              	100.00%
Bootstrap support for H9GCE5 as seed ortholog is 100%.
Bootstrap support for L0PEF5 as seed ortholog is 100%.

Group of orthologs #401. Best score 339 bits
Score difference with first non-orthologous sequence - A.carolinensis:226 P.jiroveci:339

H9GMF2              	100.00%		L0PBS9              	100.00%
Bootstrap support for H9GMF2 as seed ortholog is 100%.
Bootstrap support for L0PBS9 as seed ortholog is 100%.

Group of orthologs #402. Best score 339 bits
Score difference with first non-orthologous sequence - A.carolinensis:339 P.jiroveci:339

H9GS13              	100.00%		L0PA00              	100.00%
Bootstrap support for H9GS13 as seed ortholog is 100%.
Bootstrap support for L0PA00 as seed ortholog is 100%.

Group of orthologs #403. Best score 338 bits
Score difference with first non-orthologous sequence - A.carolinensis:338 P.jiroveci:338

H9GFJ2              	100.00%		L0PF30              	100.00%
Bootstrap support for H9GFJ2 as seed ortholog is 100%.
Bootstrap support for L0PF30 as seed ortholog is 100%.

Group of orthologs #404. Best score 337 bits
Score difference with first non-orthologous sequence - A.carolinensis:177 P.jiroveci:337

G1KCQ9              	100.00%		L0PA42              	100.00%
Bootstrap support for G1KCQ9 as seed ortholog is 100%.
Bootstrap support for L0PA42 as seed ortholog is 100%.

Group of orthologs #405. Best score 337 bits
Score difference with first non-orthologous sequence - A.carolinensis:156 P.jiroveci:337

G1KQ00              	100.00%		L0PEG2              	100.00%
Bootstrap support for G1KQ00 as seed ortholog is 99%.
Bootstrap support for L0PEG2 as seed ortholog is 100%.

Group of orthologs #406. Best score 336 bits
Score difference with first non-orthologous sequence - A.carolinensis:336 P.jiroveci:336

G1KEM6              	100.00%		L0P8T4              	100.00%
Bootstrap support for G1KEM6 as seed ortholog is 100%.
Bootstrap support for L0P8T4 as seed ortholog is 100%.

Group of orthologs #407. Best score 336 bits
Score difference with first non-orthologous sequence - A.carolinensis:336 P.jiroveci:336

G1KBH5              	100.00%		L0PEB2              	100.00%
Bootstrap support for G1KBH5 as seed ortholog is 100%.
Bootstrap support for L0PEB2 as seed ortholog is 100%.

Group of orthologs #408. Best score 336 bits
Score difference with first non-orthologous sequence - A.carolinensis:336 P.jiroveci:336

G1KAB7              	100.00%		L0PGC4              	100.00%
Bootstrap support for G1KAB7 as seed ortholog is 100%.
Bootstrap support for L0PGC4 as seed ortholog is 100%.

Group of orthologs #409. Best score 336 bits
Score difference with first non-orthologous sequence - A.carolinensis:86 P.jiroveci:101

H9G960              	100.00%		L0PA26              	100.00%
Bootstrap support for H9G960 as seed ortholog is 99%.
Bootstrap support for L0PA26 as seed ortholog is 99%.

Group of orthologs #410. Best score 335 bits
Score difference with first non-orthologous sequence - A.carolinensis:335 P.jiroveci:335

G1KYP4              	100.00%		L0PED5              	100.00%
Bootstrap support for G1KYP4 as seed ortholog is 100%.
Bootstrap support for L0PED5 as seed ortholog is 100%.

Group of orthologs #411. Best score 334 bits
Score difference with first non-orthologous sequence - A.carolinensis:334 P.jiroveci:259

H9G4S4              	100.00%		L0PCU5              	100.00%
Bootstrap support for H9G4S4 as seed ortholog is 100%.
Bootstrap support for L0PCU5 as seed ortholog is 100%.

Group of orthologs #412. Best score 333 bits
Score difference with first non-orthologous sequence - A.carolinensis:333 P.jiroveci:333

G1KIC6              	100.00%		L0PD41              	100.00%
Bootstrap support for G1KIC6 as seed ortholog is 100%.
Bootstrap support for L0PD41 as seed ortholog is 100%.

Group of orthologs #413. Best score 333 bits
Score difference with first non-orthologous sequence - A.carolinensis:333 P.jiroveci:333

G1KL44              	100.00%		L0PB54              	100.00%
Bootstrap support for G1KL44 as seed ortholog is 100%.
Bootstrap support for L0PB54 as seed ortholog is 100%.

Group of orthologs #414. Best score 333 bits
Score difference with first non-orthologous sequence - A.carolinensis:333 P.jiroveci:333

H9GAN7              	100.00%		L0PCQ8              	100.00%
Bootstrap support for H9GAN7 as seed ortholog is 100%.
Bootstrap support for L0PCQ8 as seed ortholog is 100%.

Group of orthologs #415. Best score 332 bits
Score difference with first non-orthologous sequence - A.carolinensis:332 P.jiroveci:332

H9GAU9              	100.00%		L0PFI2              	100.00%
Bootstrap support for H9GAU9 as seed ortholog is 100%.
Bootstrap support for L0PFI2 as seed ortholog is 100%.

Group of orthologs #416. Best score 331 bits
Score difference with first non-orthologous sequence - A.carolinensis:331 P.jiroveci:145

G1KKJ7              	100.00%		L0PB21              	100.00%
G1KM58              	82.10%		
Bootstrap support for G1KKJ7 as seed ortholog is 100%.
Bootstrap support for L0PB21 as seed ortholog is 100%.

Group of orthologs #417. Best score 331 bits
Score difference with first non-orthologous sequence - A.carolinensis:331 P.jiroveci:331

H9GJY9              	100.00%		L0PBY3              	100.00%
G1KFI9              	40.47%		
Bootstrap support for H9GJY9 as seed ortholog is 100%.
Bootstrap support for L0PBY3 as seed ortholog is 100%.

Group of orthologs #418. Best score 331 bits
Score difference with first non-orthologous sequence - A.carolinensis:331 P.jiroveci:331

G1KMV0              	100.00%		L0PCY9              	100.00%
Bootstrap support for G1KMV0 as seed ortholog is 100%.
Bootstrap support for L0PCY9 as seed ortholog is 100%.

Group of orthologs #419. Best score 331 bits
Score difference with first non-orthologous sequence - A.carolinensis:168 P.jiroveci:331

H9GKU8              	100.00%		L0P983              	100.00%
Bootstrap support for H9GKU8 as seed ortholog is 99%.
Bootstrap support for L0P983 as seed ortholog is 100%.

Group of orthologs #420. Best score 331 bits
Score difference with first non-orthologous sequence - A.carolinensis:331 P.jiroveci:284

H9GIQ5              	100.00%		L0PC30              	100.00%
Bootstrap support for H9GIQ5 as seed ortholog is 100%.
Bootstrap support for L0PC30 as seed ortholog is 100%.

Group of orthologs #421. Best score 330 bits
Score difference with first non-orthologous sequence - A.carolinensis:330 P.jiroveci:330

H9GFJ7              	100.00%		L0P7N5              	100.00%
H9G4K2              	45.41%		
Bootstrap support for H9GFJ7 as seed ortholog is 100%.
Bootstrap support for L0P7N5 as seed ortholog is 100%.

Group of orthologs #422. Best score 329 bits
Score difference with first non-orthologous sequence - A.carolinensis:329 P.jiroveci:329

G1KKL4              	100.00%		L0PD99              	100.00%
Bootstrap support for G1KKL4 as seed ortholog is 100%.
Bootstrap support for L0PD99 as seed ortholog is 100%.

Group of orthologs #423. Best score 329 bits
Score difference with first non-orthologous sequence - A.carolinensis:91 P.jiroveci:160

G1KNN9              	100.00%		L0PCJ5              	100.00%
Bootstrap support for G1KNN9 as seed ortholog is 98%.
Bootstrap support for L0PCJ5 as seed ortholog is 99%.

Group of orthologs #424. Best score 329 bits
Score difference with first non-orthologous sequence - A.carolinensis:329 P.jiroveci:329

H9G7V5              	100.00%		L0PHL3              	100.00%
Bootstrap support for H9G7V5 as seed ortholog is 100%.
Bootstrap support for L0PHL3 as seed ortholog is 100%.

Group of orthologs #425. Best score 329 bits
Score difference with first non-orthologous sequence - A.carolinensis:329 P.jiroveci:329

H9GNY9              	100.00%		L0PF46              	100.00%
Bootstrap support for H9GNY9 as seed ortholog is 100%.
Bootstrap support for L0PF46 as seed ortholog is 100%.

Group of orthologs #426. Best score 327 bits
Score difference with first non-orthologous sequence - A.carolinensis:327 P.jiroveci:327

G1KLM0              	100.00%		L0PBN2              	100.00%
Bootstrap support for G1KLM0 as seed ortholog is 100%.
Bootstrap support for L0PBN2 as seed ortholog is 100%.

Group of orthologs #427. Best score 326 bits
Score difference with first non-orthologous sequence - A.carolinensis:263 P.jiroveci:326

G1KHV6              	100.00%		L0P8G8              	100.00%
Bootstrap support for G1KHV6 as seed ortholog is 100%.
Bootstrap support for L0P8G8 as seed ortholog is 100%.

Group of orthologs #428. Best score 326 bits
Score difference with first non-orthologous sequence - A.carolinensis:326 P.jiroveci:326

G1KC43              	100.00%		L0PF71              	100.00%
Bootstrap support for G1KC43 as seed ortholog is 100%.
Bootstrap support for L0PF71 as seed ortholog is 100%.

Group of orthologs #429. Best score 326 bits
Score difference with first non-orthologous sequence - A.carolinensis:235 P.jiroveci:326

H9GJM9              	100.00%		L0PGL1              	100.00%
Bootstrap support for H9GJM9 as seed ortholog is 99%.
Bootstrap support for L0PGL1 as seed ortholog is 100%.

Group of orthologs #430. Best score 324 bits
Score difference with first non-orthologous sequence - A.carolinensis:258 P.jiroveci:324

H9GFM4              	100.00%		L0PB00              	100.00%
Bootstrap support for H9GFM4 as seed ortholog is 100%.
Bootstrap support for L0PB00 as seed ortholog is 100%.

Group of orthologs #431. Best score 323 bits
Score difference with first non-orthologous sequence - A.carolinensis:194 P.jiroveci:323

G1KT20              	100.00%		L0PC17              	100.00%
                    	       		L0PD22              	51.81%
Bootstrap support for G1KT20 as seed ortholog is 100%.
Bootstrap support for L0PC17 as seed ortholog is 100%.

Group of orthologs #432. Best score 323 bits
Score difference with first non-orthologous sequence - A.carolinensis:323 P.jiroveci:323

G1KBP6              	100.00%		L0P8N3              	100.00%
Bootstrap support for G1KBP6 as seed ortholog is 100%.
Bootstrap support for L0P8N3 as seed ortholog is 100%.

Group of orthologs #433. Best score 323 bits
Score difference with first non-orthologous sequence - A.carolinensis:323 P.jiroveci:323

G1KR05              	100.00%		L0PAU5              	100.00%
Bootstrap support for G1KR05 as seed ortholog is 100%.
Bootstrap support for L0PAU5 as seed ortholog is 100%.

Group of orthologs #434. Best score 323 bits
Score difference with first non-orthologous sequence - A.carolinensis:112 P.jiroveci:323

H9GNG0              	100.00%		L0P891              	100.00%
Bootstrap support for H9GNG0 as seed ortholog is 99%.
Bootstrap support for L0P891 as seed ortholog is 100%.

Group of orthologs #435. Best score 323 bits
Score difference with first non-orthologous sequence - A.carolinensis:323 P.jiroveci:323

H9GLA9              	100.00%		L0PCG4              	100.00%
Bootstrap support for H9GLA9 as seed ortholog is 100%.
Bootstrap support for L0PCG4 as seed ortholog is 100%.

Group of orthologs #436. Best score 322 bits
Score difference with first non-orthologous sequence - A.carolinensis:322 P.jiroveci:322

G1KQV8              	100.00%		L0PEZ2              	100.00%
                    	       		L0PH30              	85.07%
Bootstrap support for G1KQV8 as seed ortholog is 100%.
Bootstrap support for L0PEZ2 as seed ortholog is 100%.

Group of orthologs #437. Best score 322 bits
Score difference with first non-orthologous sequence - A.carolinensis:322 P.jiroveci:322

G1KGS3              	100.00%		L0PAF9              	100.00%
Bootstrap support for G1KGS3 as seed ortholog is 100%.
Bootstrap support for L0PAF9 as seed ortholog is 100%.

Group of orthologs #438. Best score 322 bits
Score difference with first non-orthologous sequence - A.carolinensis:322 P.jiroveci:322

G1KGA7              	100.00%		L0PCK3              	100.00%
Bootstrap support for G1KGA7 as seed ortholog is 100%.
Bootstrap support for L0PCK3 as seed ortholog is 100%.

Group of orthologs #439. Best score 321 bits
Score difference with first non-orthologous sequence - A.carolinensis:148 P.jiroveci:321

G1K908              	100.00%		L0PBD0              	100.00%
G1KRV4              	16.77%		
Bootstrap support for G1K908 as seed ortholog is 98%.
Bootstrap support for L0PBD0 as seed ortholog is 100%.

Group of orthologs #440. Best score 320 bits
Score difference with first non-orthologous sequence - A.carolinensis:242 P.jiroveci:102

H9GUW4              	100.00%		L0PAF4              	100.00%
L7N020              	93.81%		
H9G7K7              	76.24%		
H9GG73              	57.09%		
H9GMX2              	51.14%		
H9GFY6              	23.53%		
Bootstrap support for H9GUW4 as seed ortholog is 99%.
Bootstrap support for L0PAF4 as seed ortholog is 94%.

Group of orthologs #441. Best score 320 bits
Score difference with first non-orthologous sequence - A.carolinensis:58 P.jiroveci:320

G1KRC9              	100.00%		L0P942              	100.00%
G1KIX7              	33.56%		L0P7J6              	60.72%
Bootstrap support for G1KRC9 as seed ortholog is 89%.
Bootstrap support for L0P942 as seed ortholog is 100%.

Group of orthologs #442. Best score 320 bits
Score difference with first non-orthologous sequence - A.carolinensis:320 P.jiroveci:320

G1KI41              	100.00%		L0PBD2              	100.00%
Bootstrap support for G1KI41 as seed ortholog is 100%.
Bootstrap support for L0PBD2 as seed ortholog is 100%.

Group of orthologs #443. Best score 319 bits
Score difference with first non-orthologous sequence - A.carolinensis:319 P.jiroveci:319

G1KJJ5              	100.00%		L0PCV1              	100.00%
Bootstrap support for G1KJJ5 as seed ortholog is 100%.
Bootstrap support for L0PCV1 as seed ortholog is 100%.

Group of orthologs #444. Best score 318 bits
Score difference with first non-orthologous sequence - A.carolinensis:192 P.jiroveci:101

G1KKC5              	100.00%		L0P6U6              	100.00%
H9GEL7              	8.21%		
Bootstrap support for G1KKC5 as seed ortholog is 99%.
Bootstrap support for L0P6U6 as seed ortholog is 99%.

Group of orthologs #445. Best score 318 bits
Score difference with first non-orthologous sequence - A.carolinensis:52 P.jiroveci:124

G1KG95              	100.00%		L0PBP2              	100.00%
Bootstrap support for G1KG95 as seed ortholog is 94%.
Bootstrap support for L0PBP2 as seed ortholog is 99%.

Group of orthologs #446. Best score 318 bits
Score difference with first non-orthologous sequence - A.carolinensis:224 P.jiroveci:272

G1KKL1              	100.00%		L0PBU6              	100.00%
Bootstrap support for G1KKL1 as seed ortholog is 100%.
Bootstrap support for L0PBU6 as seed ortholog is 100%.

Group of orthologs #447. Best score 317 bits
Score difference with first non-orthologous sequence - A.carolinensis:317 P.jiroveci:317

G1KC48              	100.00%		L0PAL9              	100.00%
G1KJ53              	28.50%		L0PBY7              	41.47%
Bootstrap support for G1KC48 as seed ortholog is 100%.
Bootstrap support for L0PAL9 as seed ortholog is 100%.

Group of orthologs #448. Best score 317 bits
Score difference with first non-orthologous sequence - A.carolinensis:317 P.jiroveci:317

H9GTE8              	100.00%		L0PHK3              	100.00%
Bootstrap support for H9GTE8 as seed ortholog is 100%.
Bootstrap support for L0PHK3 as seed ortholog is 100%.

Group of orthologs #449. Best score 316 bits
Score difference with first non-orthologous sequence - A.carolinensis:187 P.jiroveci:316

G1K9P2              	100.00%		L0PF98              	100.00%
G1KD33              	21.29%		
Bootstrap support for G1K9P2 as seed ortholog is 99%.
Bootstrap support for L0PF98 as seed ortholog is 100%.

Group of orthologs #450. Best score 316 bits
Score difference with first non-orthologous sequence - A.carolinensis:316 P.jiroveci:316

G1K8J3              	100.00%		L0PBZ7              	100.00%
Bootstrap support for G1K8J3 as seed ortholog is 100%.
Bootstrap support for L0PBZ7 as seed ortholog is 100%.

Group of orthologs #451. Best score 316 bits
Score difference with first non-orthologous sequence - A.carolinensis:316 P.jiroveci:316

G1KCR5              	100.00%		L0P8J2              	100.00%
Bootstrap support for G1KCR5 as seed ortholog is 100%.
Bootstrap support for L0P8J2 as seed ortholog is 100%.

Group of orthologs #452. Best score 315 bits
Score difference with first non-orthologous sequence - A.carolinensis:6 P.jiroveci:315

H9GJC5              	100.00%		L0PGR0              	100.00%
G1KD36              	51.26%		
Bootstrap support for H9GJC5 as seed ortholog is 56%.
Alternative seed ortholog is G1KB02 (6 bits away from this cluster)
Bootstrap support for L0PGR0 as seed ortholog is 100%.

Group of orthologs #453. Best score 315 bits
Score difference with first non-orthologous sequence - A.carolinensis:315 P.jiroveci:315

G1KHU7              	100.00%		L0PA65              	100.00%
Bootstrap support for G1KHU7 as seed ortholog is 100%.
Bootstrap support for L0PA65 as seed ortholog is 100%.

Group of orthologs #454. Best score 315 bits
Score difference with first non-orthologous sequence - A.carolinensis:315 P.jiroveci:315

H9GEN5              	100.00%		L0PBQ9              	100.00%
Bootstrap support for H9GEN5 as seed ortholog is 100%.
Bootstrap support for L0PBQ9 as seed ortholog is 100%.

Group of orthologs #455. Best score 314 bits
Score difference with first non-orthologous sequence - A.carolinensis:148 P.jiroveci:79

G1KCI9              	100.00%		L0PB70              	100.00%
H9G409              	33.33%		
G1KL40              	26.77%		
Bootstrap support for G1KCI9 as seed ortholog is 100%.
Bootstrap support for L0PB70 as seed ortholog is 98%.

Group of orthologs #456. Best score 314 bits
Score difference with first non-orthologous sequence - A.carolinensis:314 P.jiroveci:314

G1KDC4              	100.00%		L0P9X7              	100.00%
Bootstrap support for G1KDC4 as seed ortholog is 100%.
Bootstrap support for L0P9X7 as seed ortholog is 100%.

Group of orthologs #457. Best score 314 bits
Score difference with first non-orthologous sequence - A.carolinensis:314 P.jiroveci:314

H9GMT9              	100.00%		L0P7S7              	100.00%
Bootstrap support for H9GMT9 as seed ortholog is 100%.
Bootstrap support for L0P7S7 as seed ortholog is 100%.

Group of orthologs #458. Best score 310 bits
Score difference with first non-orthologous sequence - A.carolinensis:310 P.jiroveci:310

G1KHH7              	100.00%		L0PAG0              	100.00%
Bootstrap support for G1KHH7 as seed ortholog is 100%.
Bootstrap support for L0PAG0 as seed ortholog is 100%.

Group of orthologs #459. Best score 310 bits
Score difference with first non-orthologous sequence - A.carolinensis:310 P.jiroveci:310

H9G865              	100.00%		L0PDL9              	100.00%
Bootstrap support for H9G865 as seed ortholog is 100%.
Bootstrap support for L0PDL9 as seed ortholog is 100%.

Group of orthologs #460. Best score 309 bits
Score difference with first non-orthologous sequence - A.carolinensis:309 P.jiroveci:309

G1K9N5              	100.00%		L0PDC7              	100.00%
H9GE26              	33.77%		
Bootstrap support for G1K9N5 as seed ortholog is 100%.
Bootstrap support for L0PDC7 as seed ortholog is 100%.

Group of orthologs #461. Best score 309 bits
Score difference with first non-orthologous sequence - A.carolinensis:309 P.jiroveci:309

G1KT53              	100.00%		L0PF92              	100.00%
Bootstrap support for G1KT53 as seed ortholog is 100%.
Bootstrap support for L0PF92 as seed ortholog is 100%.

Group of orthologs #462. Best score 309 bits
Score difference with first non-orthologous sequence - A.carolinensis:309 P.jiroveci:309

H9G5J2              	100.00%		L0PDI1              	100.00%
Bootstrap support for H9G5J2 as seed ortholog is 100%.
Bootstrap support for L0PDI1 as seed ortholog is 100%.

Group of orthologs #463. Best score 307 bits
Score difference with first non-orthologous sequence - A.carolinensis:307 P.jiroveci:307

G1KJX9              	100.00%		L0P8R5              	100.00%
Bootstrap support for G1KJX9 as seed ortholog is 100%.
Bootstrap support for L0P8R5 as seed ortholog is 100%.

Group of orthologs #464. Best score 307 bits
Score difference with first non-orthologous sequence - A.carolinensis:307 P.jiroveci:307

G1KQY1              	100.00%		L0PHG9              	100.00%
Bootstrap support for G1KQY1 as seed ortholog is 100%.
Bootstrap support for L0PHG9 as seed ortholog is 100%.

Group of orthologs #465. Best score 307 bits
Score difference with first non-orthologous sequence - A.carolinensis:307 P.jiroveci:307

H9G605              	100.00%		L0P9X4              	100.00%
Bootstrap support for H9G605 as seed ortholog is 100%.
Bootstrap support for L0P9X4 as seed ortholog is 100%.

Group of orthologs #466. Best score 307 bits
Score difference with first non-orthologous sequence - A.carolinensis:307 P.jiroveci:307

H9G4K6              	100.00%		L0PC62              	100.00%
Bootstrap support for H9G4K6 as seed ortholog is 100%.
Bootstrap support for L0PC62 as seed ortholog is 100%.

Group of orthologs #467. Best score 306 bits
Score difference with first non-orthologous sequence - A.carolinensis:306 P.jiroveci:306

H9GBS4              	100.00%		L0PIV4              	100.00%
Bootstrap support for H9GBS4 as seed ortholog is 100%.
Bootstrap support for L0PIV4 as seed ortholog is 100%.

Group of orthologs #468. Best score 305 bits
Score difference with first non-orthologous sequence - A.carolinensis:305 P.jiroveci:305

G1K9U3              	100.00%		L0P9Z7              	100.00%
H9G856              	73.27%		
Bootstrap support for G1K9U3 as seed ortholog is 100%.
Bootstrap support for L0P9Z7 as seed ortholog is 100%.

Group of orthologs #469. Best score 305 bits
Score difference with first non-orthologous sequence - A.carolinensis:305 P.jiroveci:182

H9GGY6              	100.00%		L0P9F3              	100.00%
G1KEJ6              	16.34%		
Bootstrap support for H9GGY6 as seed ortholog is 100%.
Bootstrap support for L0P9F3 as seed ortholog is 99%.

Group of orthologs #470. Best score 305 bits
Score difference with first non-orthologous sequence - A.carolinensis:305 P.jiroveci:305

H9G8L0              	100.00%		L0PFG1              	100.00%
Bootstrap support for H9G8L0 as seed ortholog is 100%.
Bootstrap support for L0PFG1 as seed ortholog is 100%.

Group of orthologs #471. Best score 304 bits
Score difference with first non-orthologous sequence - A.carolinensis:99 P.jiroveci:50

H9GF46              	100.00%		L0PD03              	100.00%
G1KD73              	59.64%		
Bootstrap support for H9GF46 as seed ortholog is 99%.
Bootstrap support for L0PD03 as seed ortholog is 95%.

Group of orthologs #472. Best score 304 bits
Score difference with first non-orthologous sequence - A.carolinensis:304 P.jiroveci:304

G1KTV9              	100.00%		L0PGL6              	100.00%
Bootstrap support for G1KTV9 as seed ortholog is 100%.
Bootstrap support for L0PGL6 as seed ortholog is 100%.

Group of orthologs #473. Best score 302 bits
Score difference with first non-orthologous sequence - A.carolinensis:96 P.jiroveci:34

G1KKF6              	100.00%		L0PAY5              	100.00%
Bootstrap support for G1KKF6 as seed ortholog is 99%.
Bootstrap support for L0PAY5 as seed ortholog is 81%.

Group of orthologs #474. Best score 302 bits
Score difference with first non-orthologous sequence - A.carolinensis:302 P.jiroveci:302

H9GJ97              	100.00%		L0PAP4              	100.00%
Bootstrap support for H9GJ97 as seed ortholog is 100%.
Bootstrap support for L0PAP4 as seed ortholog is 100%.

Group of orthologs #475. Best score 301 bits
Score difference with first non-orthologous sequence - A.carolinensis:301 P.jiroveci:128

G1KYR0              	100.00%		L0PH51              	100.00%
Bootstrap support for G1KYR0 as seed ortholog is 100%.
Bootstrap support for L0PH51 as seed ortholog is 99%.

Group of orthologs #476. Best score 301 bits
Score difference with first non-orthologous sequence - A.carolinensis:301 P.jiroveci:301

H9GNQ9              	100.00%		L0PA60              	100.00%
Bootstrap support for H9GNQ9 as seed ortholog is 100%.
Bootstrap support for L0PA60 as seed ortholog is 100%.

Group of orthologs #477. Best score 300 bits
Score difference with first non-orthologous sequence - A.carolinensis:300 P.jiroveci:300

G1KW67              	100.00%		L0PGN2              	100.00%
G1KHC7              	16.13%		
Bootstrap support for G1KW67 as seed ortholog is 100%.
Bootstrap support for L0PGN2 as seed ortholog is 100%.

Group of orthologs #478. Best score 299 bits
Score difference with first non-orthologous sequence - A.carolinensis:63 P.jiroveci:299

G1KIV8              	100.00%		L0PG89              	100.00%
H9GJA6              	18.39%		
H9GRK3              	13.03%		
G1KH55              	11.69%		
H9G9A1              	11.49%		
H9GPN8              	5.36%		
G1KN80              	5.17%		
Bootstrap support for G1KIV8 as seed ortholog is 94%.
Bootstrap support for L0PG89 as seed ortholog is 100%.

Group of orthologs #479. Best score 299 bits
Score difference with first non-orthologous sequence - A.carolinensis:299 P.jiroveci:299

H9GA94              	100.00%		L0PFZ0              	100.00%
Bootstrap support for H9GA94 as seed ortholog is 100%.
Bootstrap support for L0PFZ0 as seed ortholog is 100%.

Group of orthologs #480. Best score 299 bits
Score difference with first non-orthologous sequence - A.carolinensis:299 P.jiroveci:299

H9GC48              	100.00%		L0PF79              	100.00%
Bootstrap support for H9GC48 as seed ortholog is 100%.
Bootstrap support for L0PF79 as seed ortholog is 100%.

Group of orthologs #481. Best score 298 bits
Score difference with first non-orthologous sequence - A.carolinensis:298 P.jiroveci:298

G1KKR6              	100.00%		L0PFI8              	100.00%
Bootstrap support for G1KKR6 as seed ortholog is 100%.
Bootstrap support for L0PFI8 as seed ortholog is 100%.

Group of orthologs #482. Best score 297 bits
Score difference with first non-orthologous sequence - A.carolinensis:297 P.jiroveci:297

H9GDW7              	100.00%		L0PEJ1              	100.00%
G1KPP0              	37.38%		
G1KCZ9              	13.63%		
Bootstrap support for H9GDW7 as seed ortholog is 100%.
Bootstrap support for L0PEJ1 as seed ortholog is 100%.

Group of orthologs #483. Best score 296 bits
Score difference with first non-orthologous sequence - A.carolinensis:204 P.jiroveci:227

H9G980              	100.00%		L0PAL2              	100.00%
Bootstrap support for H9G980 as seed ortholog is 100%.
Bootstrap support for L0PAL2 as seed ortholog is 100%.

Group of orthologs #484. Best score 295 bits
Score difference with first non-orthologous sequence - A.carolinensis:97 P.jiroveci:242

G1KEV8              	100.00%		L0P8I7              	100.00%
Bootstrap support for G1KEV8 as seed ortholog is 99%.
Bootstrap support for L0P8I7 as seed ortholog is 100%.

Group of orthologs #485. Best score 295 bits
Score difference with first non-orthologous sequence - A.carolinensis:237 P.jiroveci:295

G1KRH9              	100.00%		L0P8X1              	100.00%
Bootstrap support for G1KRH9 as seed ortholog is 100%.
Bootstrap support for L0P8X1 as seed ortholog is 100%.

Group of orthologs #486. Best score 295 bits
Score difference with first non-orthologous sequence - A.carolinensis:243 P.jiroveci:253

G1KU10              	100.00%		L0P8I1              	100.00%
Bootstrap support for G1KU10 as seed ortholog is 100%.
Bootstrap support for L0P8I1 as seed ortholog is 100%.

Group of orthologs #487. Best score 295 bits
Score difference with first non-orthologous sequence - A.carolinensis:295 P.jiroveci:295

H9G7D3              	100.00%		L0PDA9              	100.00%
Bootstrap support for H9G7D3 as seed ortholog is 100%.
Bootstrap support for L0PDA9 as seed ortholog is 100%.

Group of orthologs #488. Best score 295 bits
Score difference with first non-orthologous sequence - A.carolinensis:295 P.jiroveci:251

H9G833              	100.00%		L0PHG7              	100.00%
Bootstrap support for H9G833 as seed ortholog is 100%.
Bootstrap support for L0PHG7 as seed ortholog is 100%.

Group of orthologs #489. Best score 295 bits
Score difference with first non-orthologous sequence - A.carolinensis:295 P.jiroveci:295

H9GHL0              	100.00%		L0PAJ2              	100.00%
Bootstrap support for H9GHL0 as seed ortholog is 100%.
Bootstrap support for L0PAJ2 as seed ortholog is 100%.

Group of orthologs #490. Best score 294 bits
Score difference with first non-orthologous sequence - A.carolinensis:294 P.jiroveci:294

G1KQR1              	100.00%		L0P870              	100.00%
Bootstrap support for G1KQR1 as seed ortholog is 100%.
Bootstrap support for L0P870 as seed ortholog is 100%.

Group of orthologs #491. Best score 294 bits
Score difference with first non-orthologous sequence - A.carolinensis:294 P.jiroveci:294

H9GBV1              	100.00%		L0PAC0              	100.00%
Bootstrap support for H9GBV1 as seed ortholog is 100%.
Bootstrap support for L0PAC0 as seed ortholog is 100%.

Group of orthologs #492. Best score 293 bits
Score difference with first non-orthologous sequence - A.carolinensis:293 P.jiroveci:293

G1KBI4              	100.00%		L0PG22              	100.00%
                    	       		L0PB04              	71.07%
Bootstrap support for G1KBI4 as seed ortholog is 100%.
Bootstrap support for L0PG22 as seed ortholog is 100%.

Group of orthologs #493. Best score 293 bits
Score difference with first non-orthologous sequence - A.carolinensis:293 P.jiroveci:293

H9GF80              	100.00%		L0PBT9              	100.00%
                    	       		L0P9Y0              	42.18%
Bootstrap support for H9GF80 as seed ortholog is 100%.
Bootstrap support for L0PBT9 as seed ortholog is 100%.

Group of orthologs #494. Best score 293 bits
Score difference with first non-orthologous sequence - A.carolinensis:242 P.jiroveci:293

G1KET8              	100.00%		L0P8L5              	100.00%
Bootstrap support for G1KET8 as seed ortholog is 100%.
Bootstrap support for L0P8L5 as seed ortholog is 100%.

Group of orthologs #495. Best score 293 bits
Score difference with first non-orthologous sequence - A.carolinensis:201 P.jiroveci:293

G1K9C4              	100.00%		L0PEC0              	100.00%
Bootstrap support for G1K9C4 as seed ortholog is 100%.
Bootstrap support for L0PEC0 as seed ortholog is 100%.

Group of orthologs #496. Best score 293 bits
Score difference with first non-orthologous sequence - A.carolinensis:293 P.jiroveci:293

H9GFA7              	100.00%		L0PCI3              	100.00%
Bootstrap support for H9GFA7 as seed ortholog is 100%.
Bootstrap support for L0PCI3 as seed ortholog is 100%.

Group of orthologs #497. Best score 292 bits
Score difference with first non-orthologous sequence - A.carolinensis:162 P.jiroveci:292

G1KFG3              	100.00%		L0PEP1              	100.00%
H9G5F2              	23.85%		L0PIJ3              	81.59%
Bootstrap support for G1KFG3 as seed ortholog is 99%.
Bootstrap support for L0PEP1 as seed ortholog is 100%.

Group of orthologs #498. Best score 292 bits
Score difference with first non-orthologous sequence - A.carolinensis:292 P.jiroveci:292

H9GHN5              	100.00%		L0PDY1              	100.00%
G1KE41              	45.01%		
H9GJV9              	43.48%		
Bootstrap support for H9GHN5 as seed ortholog is 100%.
Bootstrap support for L0PDY1 as seed ortholog is 100%.

Group of orthologs #499. Best score 292 bits
Score difference with first non-orthologous sequence - A.carolinensis:73 P.jiroveci:110

H9GM81              	100.00%		L0P966              	100.00%
Bootstrap support for H9GM81 as seed ortholog is 93%.
Bootstrap support for L0P966 as seed ortholog is 99%.

Group of orthologs #500. Best score 291 bits
Score difference with first non-orthologous sequence - A.carolinensis:203 P.jiroveci:230

H9GK81              	100.00%		L0PFE0              	100.00%
Bootstrap support for H9GK81 as seed ortholog is 100%.
Bootstrap support for L0PFE0 as seed ortholog is 100%.

Group of orthologs #501. Best score 291 bits
Score difference with first non-orthologous sequence - A.carolinensis:291 P.jiroveci:291

H9GQD1              	100.00%		L0PB28              	100.00%
Bootstrap support for H9GQD1 as seed ortholog is 100%.
Bootstrap support for L0PB28 as seed ortholog is 100%.

Group of orthologs #502. Best score 290 bits
Score difference with first non-orthologous sequence - A.carolinensis:167 P.jiroveci:290

G1KRD8              	100.00%		L0P865              	100.00%
Bootstrap support for G1KRD8 as seed ortholog is 100%.
Bootstrap support for L0P865 as seed ortholog is 100%.

Group of orthologs #503. Best score 290 bits
Score difference with first non-orthologous sequence - A.carolinensis:290 P.jiroveci:290

H9G5T2              	100.00%		L0PEY2              	100.00%
Bootstrap support for H9G5T2 as seed ortholog is 100%.
Bootstrap support for L0PEY2 as seed ortholog is 100%.

Group of orthologs #504. Best score 290 bits
Score difference with first non-orthologous sequence - A.carolinensis:100 P.jiroveci:239

H9G5A9              	100.00%		L0PH42              	100.00%
Bootstrap support for H9G5A9 as seed ortholog is 99%.
Bootstrap support for L0PH42 as seed ortholog is 100%.

Group of orthologs #505. Best score 290 bits
Score difference with first non-orthologous sequence - A.carolinensis:290 P.jiroveci:290

H9GGQ7              	100.00%		L0PFX9              	100.00%
Bootstrap support for H9GGQ7 as seed ortholog is 100%.
Bootstrap support for L0PFX9 as seed ortholog is 100%.

Group of orthologs #506. Best score 290 bits
Score difference with first non-orthologous sequence - A.carolinensis:198 P.jiroveci:207

H9GL15              	100.00%		L0PE04              	100.00%
Bootstrap support for H9GL15 as seed ortholog is 100%.
Bootstrap support for L0PE04 as seed ortholog is 100%.

Group of orthologs #507. Best score 289 bits
Score difference with first non-orthologous sequence - A.carolinensis:113 P.jiroveci:289

G1KD04              	100.00%		L0P8B4              	100.00%
H9G3T9              	45.75%		
Bootstrap support for G1KD04 as seed ortholog is 99%.
Bootstrap support for L0P8B4 as seed ortholog is 100%.

Group of orthologs #508. Best score 289 bits
Score difference with first non-orthologous sequence - A.carolinensis:289 P.jiroveci:289

G1KB76              	100.00%		L0PEM6              	100.00%
G1KTM0              	64.15%		
Bootstrap support for G1KB76 as seed ortholog is 100%.
Bootstrap support for L0PEM6 as seed ortholog is 100%.

Group of orthologs #509. Best score 289 bits
Score difference with first non-orthologous sequence - A.carolinensis:289 P.jiroveci:289

G1KIH0              	100.00%		L0PDT4              	100.00%
H9GJG6              	47.83%		
Bootstrap support for G1KIH0 as seed ortholog is 100%.
Bootstrap support for L0PDT4 as seed ortholog is 100%.

Group of orthologs #510. Best score 288 bits
Score difference with first non-orthologous sequence - A.carolinensis:217 P.jiroveci:288

H9G892              	100.00%		L0PDZ2              	100.00%
Bootstrap support for H9G892 as seed ortholog is 100%.
Bootstrap support for L0PDZ2 as seed ortholog is 100%.

Group of orthologs #511. Best score 287 bits
Score difference with first non-orthologous sequence - A.carolinensis:287 P.jiroveci:287

G1KPH8              	100.00%		L0PA63              	100.00%
Bootstrap support for G1KPH8 as seed ortholog is 100%.
Bootstrap support for L0PA63 as seed ortholog is 100%.

Group of orthologs #512. Best score 287 bits
Score difference with first non-orthologous sequence - A.carolinensis:287 P.jiroveci:287

H9GNT7              	100.00%		L0PAP1              	100.00%
Bootstrap support for H9GNT7 as seed ortholog is 100%.
Bootstrap support for L0PAP1 as seed ortholog is 100%.

Group of orthologs #513. Best score 287 bits
Score difference with first non-orthologous sequence - A.carolinensis:287 P.jiroveci:287

H9GMK7              	100.00%		L0PEG1              	100.00%
Bootstrap support for H9GMK7 as seed ortholog is 100%.
Bootstrap support for L0PEG1 as seed ortholog is 100%.

Group of orthologs #514. Best score 285 bits
Score difference with first non-orthologous sequence - A.carolinensis:285 P.jiroveci:285

G1KGM6              	100.00%		L0PF83              	100.00%
Bootstrap support for G1KGM6 as seed ortholog is 100%.
Bootstrap support for L0PF83 as seed ortholog is 100%.

Group of orthologs #515. Best score 285 bits
Score difference with first non-orthologous sequence - A.carolinensis:285 P.jiroveci:285

G1KH05              	100.00%		L0PFE1              	100.00%
Bootstrap support for G1KH05 as seed ortholog is 100%.
Bootstrap support for L0PFE1 as seed ortholog is 100%.

Group of orthologs #516. Best score 284 bits
Score difference with first non-orthologous sequence - A.carolinensis:284 P.jiroveci:284

G1KFL4              	100.00%		L0P8B2              	100.00%
Bootstrap support for G1KFL4 as seed ortholog is 100%.
Bootstrap support for L0P8B2 as seed ortholog is 100%.

Group of orthologs #517. Best score 283 bits
Score difference with first non-orthologous sequence - A.carolinensis:194 P.jiroveci:283

G1KHK9              	100.00%		L0PEM3              	100.00%
Bootstrap support for G1KHK9 as seed ortholog is 100%.
Bootstrap support for L0PEM3 as seed ortholog is 100%.

Group of orthologs #518. Best score 283 bits
Score difference with first non-orthologous sequence - A.carolinensis:182 P.jiroveci:283

H9GN87              	100.00%		L0PDL6              	100.00%
Bootstrap support for H9GN87 as seed ortholog is 100%.
Bootstrap support for L0PDL6 as seed ortholog is 100%.

Group of orthologs #519. Best score 283 bits
Score difference with first non-orthologous sequence - A.carolinensis:283 P.jiroveci:283

H9GMU9              	100.00%		L0PEB1              	100.00%
Bootstrap support for H9GMU9 as seed ortholog is 100%.
Bootstrap support for L0PEB1 as seed ortholog is 100%.

Group of orthologs #520. Best score 282 bits
Score difference with first non-orthologous sequence - A.carolinensis:282 P.jiroveci:282

G1KLA0              	100.00%		L0PB86              	100.00%
Bootstrap support for G1KLA0 as seed ortholog is 100%.
Bootstrap support for L0PB86 as seed ortholog is 100%.

Group of orthologs #521. Best score 280 bits
Score difference with first non-orthologous sequence - A.carolinensis:280 P.jiroveci:280

G1KB07              	100.00%		L0PBE0              	100.00%
Bootstrap support for G1KB07 as seed ortholog is 100%.
Bootstrap support for L0PBE0 as seed ortholog is 100%.

Group of orthologs #522. Best score 280 bits
Score difference with first non-orthologous sequence - A.carolinensis:95 P.jiroveci:280

G1KPV4              	100.00%		L0PCG0              	100.00%
Bootstrap support for G1KPV4 as seed ortholog is 99%.
Bootstrap support for L0PCG0 as seed ortholog is 100%.

Group of orthologs #523. Best score 280 bits
Score difference with first non-orthologous sequence - A.carolinensis:84 P.jiroveci:181

H9G4Y0              	100.00%		L0PC59              	100.00%
Bootstrap support for H9G4Y0 as seed ortholog is 100%.
Bootstrap support for L0PC59 as seed ortholog is 100%.

Group of orthologs #524. Best score 280 bits
Score difference with first non-orthologous sequence - A.carolinensis:280 P.jiroveci:280

H9GBK0              	100.00%		L0P7Q3              	100.00%
Bootstrap support for H9GBK0 as seed ortholog is 100%.
Bootstrap support for L0P7Q3 as seed ortholog is 100%.

Group of orthologs #525. Best score 279 bits
Score difference with first non-orthologous sequence - A.carolinensis:155 P.jiroveci:279

G1KLN3              	100.00%		L0P9F6              	100.00%
G1KAL3              	43.73%		
G1KEX8              	40.11%		
H9GJB1              	32.59%		
Bootstrap support for G1KLN3 as seed ortholog is 99%.
Bootstrap support for L0P9F6 as seed ortholog is 100%.

Group of orthologs #526. Best score 279 bits
Score difference with first non-orthologous sequence - A.carolinensis:121 P.jiroveci:222

H9GM45              	100.00%		L0PGP6              	100.00%
G1KJF6              	47.01%		
H9GBE7              	15.67%		
Bootstrap support for H9GM45 as seed ortholog is 100%.
Bootstrap support for L0PGP6 as seed ortholog is 100%.

Group of orthologs #527. Best score 279 bits
Score difference with first non-orthologous sequence - A.carolinensis:279 P.jiroveci:279

H9GBY8              	100.00%		L0P9T2              	100.00%
G1KD11              	35.96%		
Bootstrap support for H9GBY8 as seed ortholog is 100%.
Bootstrap support for L0P9T2 as seed ortholog is 100%.

Group of orthologs #528. Best score 279 bits
Score difference with first non-orthologous sequence - A.carolinensis:279 P.jiroveci:279

G1KE62              	100.00%		L0PEV9              	100.00%
Bootstrap support for G1KE62 as seed ortholog is 100%.
Bootstrap support for L0PEV9 as seed ortholog is 100%.

Group of orthologs #529. Best score 279 bits
Score difference with first non-orthologous sequence - A.carolinensis:227 P.jiroveci:279

G1KQL2              	100.00%		L0PHN0              	100.00%
Bootstrap support for G1KQL2 as seed ortholog is 100%.
Bootstrap support for L0PHN0 as seed ortholog is 100%.

Group of orthologs #530. Best score 279 bits
Score difference with first non-orthologous sequence - A.carolinensis:279 P.jiroveci:279

H9GI36              	100.00%		L0P9S7              	100.00%
Bootstrap support for H9GI36 as seed ortholog is 100%.
Bootstrap support for L0P9S7 as seed ortholog is 100%.

Group of orthologs #531. Best score 279 bits
Score difference with first non-orthologous sequence - A.carolinensis:221 P.jiroveci:279

H9GFX3              	100.00%		L0PHJ3              	100.00%
Bootstrap support for H9GFX3 as seed ortholog is 100%.
Bootstrap support for L0PHJ3 as seed ortholog is 100%.

Group of orthologs #532. Best score 278 bits
Score difference with first non-orthologous sequence - A.carolinensis:278 P.jiroveci:278

G1K8Q0              	100.00%		L0PAQ1              	100.00%
Bootstrap support for G1K8Q0 as seed ortholog is 100%.
Bootstrap support for L0PAQ1 as seed ortholog is 100%.

Group of orthologs #533. Best score 278 bits
Score difference with first non-orthologous sequence - A.carolinensis:153 P.jiroveci:278

G1KPJ5              	100.00%		L0P8F8              	100.00%
Bootstrap support for G1KPJ5 as seed ortholog is 99%.
Bootstrap support for L0P8F8 as seed ortholog is 100%.

Group of orthologs #534. Best score 278 bits
Score difference with first non-orthologous sequence - A.carolinensis:278 P.jiroveci:278

H9GNR5              	100.00%		L0PCY0              	100.00%
Bootstrap support for H9GNR5 as seed ortholog is 100%.
Bootstrap support for L0PCY0 as seed ortholog is 100%.

Group of orthologs #535. Best score 277 bits
Score difference with first non-orthologous sequence - A.carolinensis:175 P.jiroveci:277

H9GP40              	100.00%		L0PGF2              	100.00%
G1KND1              	43.11%		
G1KG14              	32.36%		
Bootstrap support for H9GP40 as seed ortholog is 99%.
Bootstrap support for L0PGF2 as seed ortholog is 100%.

Group of orthologs #536. Best score 277 bits
Score difference with first non-orthologous sequence - A.carolinensis:277 P.jiroveci:133

G1KS92              	100.00%		L0PB03              	100.00%
Bootstrap support for G1KS92 as seed ortholog is 100%.
Bootstrap support for L0PB03 as seed ortholog is 99%.

Group of orthologs #537. Best score 275 bits
Score difference with first non-orthologous sequence - A.carolinensis:105 P.jiroveci:275

H9G5R6              	100.00%		L0PCJ2              	100.00%
H9GBG4              	11.35%		
Bootstrap support for H9G5R6 as seed ortholog is 99%.
Bootstrap support for L0PCJ2 as seed ortholog is 100%.

Group of orthologs #538. Best score 275 bits
Score difference with first non-orthologous sequence - A.carolinensis:275 P.jiroveci:164

H9GJ35              	100.00%		L0PE17              	100.00%
Bootstrap support for H9GJ35 as seed ortholog is 100%.
Bootstrap support for L0PE17 as seed ortholog is 100%.

Group of orthologs #539. Best score 275 bits
Score difference with first non-orthologous sequence - A.carolinensis:176 P.jiroveci:153

H9GNE3              	100.00%		L0PDB7              	100.00%
Bootstrap support for H9GNE3 as seed ortholog is 100%.
Bootstrap support for L0PDB7 as seed ortholog is 100%.

Group of orthologs #540. Best score 275 bits
Score difference with first non-orthologous sequence - A.carolinensis:218 P.jiroveci:223

H9GN07              	100.00%		L0PHK8              	100.00%
Bootstrap support for H9GN07 as seed ortholog is 100%.
Bootstrap support for L0PHK8 as seed ortholog is 100%.

Group of orthologs #541. Best score 274 bits
Score difference with first non-orthologous sequence - A.carolinensis:59 P.jiroveci:274

G1K896              	100.00%		L0PAA3              	100.00%
G1KFW4              	41.43%		
Bootstrap support for G1K896 as seed ortholog is 91%.
Bootstrap support for L0PAA3 as seed ortholog is 100%.

Group of orthologs #542. Best score 274 bits
Score difference with first non-orthologous sequence - A.carolinensis:274 P.jiroveci:274

H9G8C1              	100.00%		L0PBT3              	100.00%
Bootstrap support for H9G8C1 as seed ortholog is 100%.
Bootstrap support for L0PBT3 as seed ortholog is 100%.

Group of orthologs #543. Best score 272 bits
Score difference with first non-orthologous sequence - A.carolinensis:72 P.jiroveci:2

G1KGJ7              	100.00%		L0PAI9              	100.00%
H9G445              	17.60%		
G1K9J0              	17.27%		
H9G448              	17.11%		
H9GH16              	15.46%		
G1KMB7              	8.22%		
G1KN43              	7.40%		
G1K9W5              	5.43%		
Bootstrap support for G1KGJ7 as seed ortholog is 96%.
Bootstrap support for L0PAI9 as seed ortholog is 50%.
Alternative seed ortholog is L0PCM1 (2 bits away from this cluster)

Group of orthologs #544. Best score 272 bits
Score difference with first non-orthologous sequence - A.carolinensis:112 P.jiroveci:163

G1KFW9              	100.00%		L0P9E4              	100.00%
G1KHJ4              	87.50%		
G1KBA4              	38.54%		
Bootstrap support for G1KFW9 as seed ortholog is 99%.
Bootstrap support for L0P9E4 as seed ortholog is 100%.

Group of orthologs #545. Best score 272 bits
Score difference with first non-orthologous sequence - A.carolinensis:272 P.jiroveci:272

H9GC04              	100.00%		L0P9C4              	100.00%
H9G523              	56.08%		
Bootstrap support for H9GC04 as seed ortholog is 100%.
Bootstrap support for L0P9C4 as seed ortholog is 100%.

Group of orthologs #546. Best score 271 bits
Score difference with first non-orthologous sequence - A.carolinensis:271 P.jiroveci:271

H9G7J7              	100.00%		L0PI09              	100.00%
Bootstrap support for H9G7J7 as seed ortholog is 100%.
Bootstrap support for L0PI09 as seed ortholog is 100%.

Group of orthologs #547. Best score 270 bits
Score difference with first non-orthologous sequence - A.carolinensis:37 P.jiroveci:90

G1KN11              	100.00%		L0PDD3              	100.00%
Bootstrap support for G1KN11 as seed ortholog is 91%.
Bootstrap support for L0PDD3 as seed ortholog is 99%.

Group of orthologs #548. Best score 269 bits
Score difference with first non-orthologous sequence - A.carolinensis:269 P.jiroveci:269

H9G6F4              	100.00%		L0PDJ2              	100.00%
Bootstrap support for H9G6F4 as seed ortholog is 100%.
Bootstrap support for L0PDJ2 as seed ortholog is 100%.

Group of orthologs #549. Best score 269 bits
Score difference with first non-orthologous sequence - A.carolinensis:269 P.jiroveci:269

H9GN01              	100.00%		L0P9B8              	100.00%
Bootstrap support for H9GN01 as seed ortholog is 100%.
Bootstrap support for L0P9B8 as seed ortholog is 100%.

Group of orthologs #550. Best score 268 bits
Score difference with first non-orthologous sequence - A.carolinensis:268 P.jiroveci:268

G1KF69              	100.00%		L0PA72              	100.00%
H9G8E3              	57.23%		
Bootstrap support for G1KF69 as seed ortholog is 100%.
Bootstrap support for L0PA72 as seed ortholog is 100%.

Group of orthologs #551. Best score 268 bits
Score difference with first non-orthologous sequence - A.carolinensis:268 P.jiroveci:268

H9GP29              	100.00%		L0PE74              	100.00%
G1KTU1              	46.68%		
Bootstrap support for H9GP29 as seed ortholog is 100%.
Bootstrap support for L0PE74 as seed ortholog is 100%.

Group of orthologs #552. Best score 268 bits
Score difference with first non-orthologous sequence - A.carolinensis:268 P.jiroveci:268

H9G398              	100.00%		L0PGV8              	100.00%
Bootstrap support for H9G398 as seed ortholog is 100%.
Bootstrap support for L0PGV8 as seed ortholog is 100%.

Group of orthologs #553. Best score 267 bits
Score difference with first non-orthologous sequence - A.carolinensis:159 P.jiroveci:267

H9G743              	100.00%		L0PDR6              	100.00%
H9G6I0              	81.62%		
H9GAQ1              	77.98%		
Bootstrap support for H9G743 as seed ortholog is 99%.
Bootstrap support for L0PDR6 as seed ortholog is 100%.

Group of orthologs #554. Best score 266 bits
Score difference with first non-orthologous sequence - A.carolinensis:20 P.jiroveci:49

G1KS45              	100.00%		L0P6X2              	100.00%
H9GQE1              	71.09%		
G1KJU4              	54.69%		
H9GKL1              	12.50%		
H9GLP8              	6.25%		
Bootstrap support for G1KS45 as seed ortholog is 75%.
Bootstrap support for L0P6X2 as seed ortholog is 96%.

Group of orthologs #555. Best score 266 bits
Score difference with first non-orthologous sequence - A.carolinensis:139 P.jiroveci:266

G1K983              	100.00%		L0PBM0              	100.00%
G1KD54              	9.51%		
Bootstrap support for G1K983 as seed ortholog is 99%.
Bootstrap support for L0PBM0 as seed ortholog is 100%.

Group of orthologs #556. Best score 266 bits
Score difference with first non-orthologous sequence - A.carolinensis:266 P.jiroveci:266

H9GDD8              	100.00%		L0P9N7              	100.00%
H9GPZ0              	11.98%		
Bootstrap support for H9GDD8 as seed ortholog is 100%.
Bootstrap support for L0P9N7 as seed ortholog is 100%.

Group of orthologs #557. Best score 266 bits
Score difference with first non-orthologous sequence - A.carolinensis:266 P.jiroveci:266

G1KVK5              	100.00%		L0PES4              	100.00%
Bootstrap support for G1KVK5 as seed ortholog is 100%.
Bootstrap support for L0PES4 as seed ortholog is 100%.

Group of orthologs #558. Best score 266 bits
Score difference with first non-orthologous sequence - A.carolinensis:266 P.jiroveci:266

H9GJF4              	100.00%		L0P9U8              	100.00%
Bootstrap support for H9GJF4 as seed ortholog is 100%.
Bootstrap support for L0P9U8 as seed ortholog is 100%.

Group of orthologs #559. Best score 265 bits
Score difference with first non-orthologous sequence - A.carolinensis:11 P.jiroveci:82

H9G3P4              	100.00%		L0PB47              	100.00%
Bootstrap support for H9G3P4 as seed ortholog is 60%.
Alternative seed ortholog is H9GG30 (11 bits away from this cluster)
Bootstrap support for L0PB47 as seed ortholog is 99%.

Group of orthologs #560. Best score 264 bits
Score difference with first non-orthologous sequence - A.carolinensis:264 P.jiroveci:264

H9GI74              	100.00%		L0PDV1              	100.00%
Bootstrap support for H9GI74 as seed ortholog is 100%.
Bootstrap support for L0PDV1 as seed ortholog is 100%.

Group of orthologs #561. Best score 263 bits
Score difference with first non-orthologous sequence - A.carolinensis:263 P.jiroveci:263

H9G4H9              	100.00%		L0P6P2              	100.00%
H9GFK5              	45.52%		
Bootstrap support for H9G4H9 as seed ortholog is 100%.
Bootstrap support for L0P6P2 as seed ortholog is 100%.

Group of orthologs #562. Best score 262 bits
Score difference with first non-orthologous sequence - A.carolinensis:262 P.jiroveci:262

G1KKZ2              	100.00%		L0P7W4              	100.00%
Bootstrap support for G1KKZ2 as seed ortholog is 100%.
Bootstrap support for L0P7W4 as seed ortholog is 100%.

Group of orthologs #563. Best score 262 bits
Score difference with first non-orthologous sequence - A.carolinensis:91 P.jiroveci:262

H9GK01              	100.00%		L0P962              	100.00%
Bootstrap support for H9GK01 as seed ortholog is 97%.
Bootstrap support for L0P962 as seed ortholog is 100%.

Group of orthologs #564. Best score 261 bits
Score difference with first non-orthologous sequence - A.carolinensis:187 P.jiroveci:261

H9GFK4              	100.00%		L0PBA8              	100.00%
Bootstrap support for H9GFK4 as seed ortholog is 100%.
Bootstrap support for L0PBA8 as seed ortholog is 100%.

Group of orthologs #565. Best score 260 bits
Score difference with first non-orthologous sequence - A.carolinensis:175 P.jiroveci:260

G1KIV1              	100.00%		L0PBH8              	100.00%
Bootstrap support for G1KIV1 as seed ortholog is 99%.
Bootstrap support for L0PBH8 as seed ortholog is 100%.

Group of orthologs #566. Best score 259 bits
Score difference with first non-orthologous sequence - A.carolinensis:113 P.jiroveci:259

G1KKZ4              	100.00%		L0PDF9              	100.00%
G1KS72              	91.85%		
G1KIR3              	65.86%		
G1KL82              	53.74%		
G1KIH5              	50.22%		
G1KRZ5              	43.17%		
H9GCG2              	25.55%		
G1KEY8              	17.62%		
G1KVG1              	10.57%		
H9G611              	9.91%		
H9GPC5              	5.51%		
Bootstrap support for G1KKZ4 as seed ortholog is 99%.
Bootstrap support for L0PDF9 as seed ortholog is 100%.

Group of orthologs #567. Best score 259 bits
Score difference with first non-orthologous sequence - A.carolinensis:50 P.jiroveci:259

H9G5Z1              	100.00%		L0P967              	100.00%
H9GTH2              	51.88%		
Bootstrap support for H9G5Z1 as seed ortholog is 86%.
Bootstrap support for L0P967 as seed ortholog is 100%.

Group of orthologs #568. Best score 259 bits
Score difference with first non-orthologous sequence - A.carolinensis:259 P.jiroveci:259

G1KB61              	100.00%		L0P9M9              	100.00%
Bootstrap support for G1KB61 as seed ortholog is 100%.
Bootstrap support for L0P9M9 as seed ortholog is 100%.

Group of orthologs #569. Best score 259 bits
Score difference with first non-orthologous sequence - A.carolinensis:259 P.jiroveci:259

G1KGM7              	100.00%		L0P9T5              	100.00%
Bootstrap support for G1KGM7 as seed ortholog is 100%.
Bootstrap support for L0P9T5 as seed ortholog is 100%.

Group of orthologs #570. Best score 259 bits
Score difference with first non-orthologous sequence - A.carolinensis:259 P.jiroveci:259

G1KIC4              	100.00%		L0PB11              	100.00%
Bootstrap support for G1KIC4 as seed ortholog is 100%.
Bootstrap support for L0PB11 as seed ortholog is 100%.

Group of orthologs #571. Best score 259 bits
Score difference with first non-orthologous sequence - A.carolinensis:193 P.jiroveci:259

H9G3C7              	100.00%		L0P949              	100.00%
Bootstrap support for H9G3C7 as seed ortholog is 100%.
Bootstrap support for L0P949 as seed ortholog is 100%.

Group of orthologs #572. Best score 257 bits
Score difference with first non-orthologous sequence - A.carolinensis:257 P.jiroveci:257

H9GJC6              	100.00%		L0PGD7              	100.00%
H9GDN1              	54.39%		L0PGQ0              	56.74%
H9GN40              	43.27%		
Bootstrap support for H9GJC6 as seed ortholog is 100%.
Bootstrap support for L0PGD7 as seed ortholog is 100%.

Group of orthologs #573. Best score 257 bits
Score difference with first non-orthologous sequence - A.carolinensis:189 P.jiroveci:186

H9G7Q9              	100.00%		L0PF24              	100.00%
G1KD23              	83.73%		
H9GAL1              	60.24%		
Bootstrap support for H9G7Q9 as seed ortholog is 100%.
Bootstrap support for L0PF24 as seed ortholog is 100%.

Group of orthologs #574. Best score 257 bits
Score difference with first non-orthologous sequence - A.carolinensis:257 P.jiroveci:257

G1K8A3              	100.00%		L0PBY9              	100.00%
Bootstrap support for G1K8A3 as seed ortholog is 100%.
Bootstrap support for L0PBY9 as seed ortholog is 100%.

Group of orthologs #575. Best score 256 bits
Score difference with first non-orthologous sequence - A.carolinensis:256 P.jiroveci:256

H9G9U6              	100.00%		L0PAM2              	100.00%
Bootstrap support for H9G9U6 as seed ortholog is 100%.
Bootstrap support for L0PAM2 as seed ortholog is 100%.

Group of orthologs #576. Best score 255 bits
Score difference with first non-orthologous sequence - A.carolinensis:110 P.jiroveci:255

H9GH71              	100.00%		L0PDT8              	100.00%
                    	       		L0P9R2              	90.20%
Bootstrap support for H9GH71 as seed ortholog is 99%.
Bootstrap support for L0PDT8 as seed ortholog is 100%.

Group of orthologs #577. Best score 255 bits
Score difference with first non-orthologous sequence - A.carolinensis:255 P.jiroveci:255

G1KG72              	100.00%		L0P914              	100.00%
Bootstrap support for G1KG72 as seed ortholog is 100%.
Bootstrap support for L0P914 as seed ortholog is 100%.

Group of orthologs #578. Best score 255 bits
Score difference with first non-orthologous sequence - A.carolinensis:255 P.jiroveci:255

G1KFK6              	100.00%		L0PB61              	100.00%
Bootstrap support for G1KFK6 as seed ortholog is 100%.
Bootstrap support for L0PB61 as seed ortholog is 100%.

Group of orthologs #579. Best score 255 bits
Score difference with first non-orthologous sequence - A.carolinensis:165 P.jiroveci:151

G1KLU0              	100.00%		L0PFY7              	100.00%
Bootstrap support for G1KLU0 as seed ortholog is 100%.
Bootstrap support for L0PFY7 as seed ortholog is 99%.

Group of orthologs #580. Best score 255 bits
Score difference with first non-orthologous sequence - A.carolinensis:255 P.jiroveci:255

H9G791              	100.00%		L0PCC1              	100.00%
Bootstrap support for H9G791 as seed ortholog is 100%.
Bootstrap support for L0PCC1 as seed ortholog is 100%.

Group of orthologs #581. Best score 253 bits
Score difference with first non-orthologous sequence - A.carolinensis:253 P.jiroveci:253

G1KB84              	100.00%		L0PGV2              	100.00%
                    	       		L0PG40              	61.41%
Bootstrap support for G1KB84 as seed ortholog is 100%.
Bootstrap support for L0PGV2 as seed ortholog is 100%.

Group of orthologs #582. Best score 252 bits
Score difference with first non-orthologous sequence - A.carolinensis:252 P.jiroveci:252

G1KIF0              	100.00%		L0P9W3              	100.00%
Bootstrap support for G1KIF0 as seed ortholog is 100%.
Bootstrap support for L0P9W3 as seed ortholog is 100%.

Group of orthologs #583. Best score 251 bits
Score difference with first non-orthologous sequence - A.carolinensis:104 P.jiroveci:251

G1KLJ0              	100.00%		L0P9S5              	100.00%
G1KI39              	74.25%		
G1K9B0              	62.66%		
H9GNH2              	36.91%		
H9G7C5              	28.33%		
Bootstrap support for G1KLJ0 as seed ortholog is 100%.
Bootstrap support for L0P9S5 as seed ortholog is 100%.

Group of orthologs #584. Best score 251 bits
Score difference with first non-orthologous sequence - A.carolinensis:207 P.jiroveci:192

G1KFK8              	100.00%		L0P895              	100.00%
Bootstrap support for G1KFK8 as seed ortholog is 100%.
Bootstrap support for L0P895 as seed ortholog is 100%.

Group of orthologs #585. Best score 251 bits
Score difference with first non-orthologous sequence - A.carolinensis:251 P.jiroveci:251

G1KK03              	100.00%		L0PDS2              	100.00%
Bootstrap support for G1KK03 as seed ortholog is 100%.
Bootstrap support for L0PDS2 as seed ortholog is 100%.

Group of orthologs #586. Best score 250 bits
Score difference with first non-orthologous sequence - A.carolinensis:250 P.jiroveci:250

G1KFQ3              	100.00%		L0PDN4              	100.00%
Bootstrap support for G1KFQ3 as seed ortholog is 100%.
Bootstrap support for L0PDN4 as seed ortholog is 100%.

Group of orthologs #587. Best score 249 bits
Score difference with first non-orthologous sequence - A.carolinensis:249 P.jiroveci:58

G1KEL7              	100.00%		L0PAQ7              	100.00%
Bootstrap support for G1KEL7 as seed ortholog is 100%.
Bootstrap support for L0PAQ7 as seed ortholog is 97%.

Group of orthologs #588. Best score 249 bits
Score difference with first non-orthologous sequence - A.carolinensis:249 P.jiroveci:249

H9GE47              	100.00%		L0PCX5              	100.00%
Bootstrap support for H9GE47 as seed ortholog is 100%.
Bootstrap support for L0PCX5 as seed ortholog is 100%.

Group of orthologs #589. Best score 248 bits
Score difference with first non-orthologous sequence - A.carolinensis:67 P.jiroveci:194

G1KAB3              	100.00%		L0P876              	100.00%
H9G8V3              	59.70%		
Bootstrap support for G1KAB3 as seed ortholog is 99%.
Bootstrap support for L0P876 as seed ortholog is 100%.

Group of orthologs #590. Best score 248 bits
Score difference with first non-orthologous sequence - A.carolinensis:198 P.jiroveci:140

G1KKL0              	100.00%		L0PFS8              	100.00%
Bootstrap support for G1KKL0 as seed ortholog is 100%.
Bootstrap support for L0PFS8 as seed ortholog is 100%.

Group of orthologs #591. Best score 248 bits
Score difference with first non-orthologous sequence - A.carolinensis:177 P.jiroveci:248

G1KPQ9              	100.00%		L0PBS3              	100.00%
Bootstrap support for G1KPQ9 as seed ortholog is 100%.
Bootstrap support for L0PBS3 as seed ortholog is 100%.

Group of orthologs #592. Best score 248 bits
Score difference with first non-orthologous sequence - A.carolinensis:248 P.jiroveci:248

H9G589              	100.00%		L0PE61              	100.00%
Bootstrap support for H9G589 as seed ortholog is 100%.
Bootstrap support for L0PE61 as seed ortholog is 100%.

Group of orthologs #593. Best score 248 bits
Score difference with first non-orthologous sequence - A.carolinensis:248 P.jiroveci:248

H9GML4              	100.00%		L0PC61              	100.00%
Bootstrap support for H9GML4 as seed ortholog is 100%.
Bootstrap support for L0PC61 as seed ortholog is 100%.

Group of orthologs #594. Best score 247 bits
Score difference with first non-orthologous sequence - A.carolinensis:247 P.jiroveci:247

G1KK10              	100.00%		L0PID4              	100.00%
H9G3U6              	97.54%		L0PGF7              	31.60%
Bootstrap support for G1KK10 as seed ortholog is 100%.
Bootstrap support for L0PID4 as seed ortholog is 100%.

Group of orthologs #595. Best score 247 bits
Score difference with first non-orthologous sequence - A.carolinensis:247 P.jiroveci:247

G1KIW0              	100.00%		L0P9J6              	100.00%
                    	       		L0PH67              	86.59%
Bootstrap support for G1KIW0 as seed ortholog is 100%.
Bootstrap support for L0P9J6 as seed ortholog is 100%.

Group of orthologs #596. Best score 247 bits
Score difference with first non-orthologous sequence - A.carolinensis:247 P.jiroveci:199

G1KQQ6              	100.00%		L0PBG0              	100.00%
Bootstrap support for G1KQQ6 as seed ortholog is 100%.
Bootstrap support for L0PBG0 as seed ortholog is 100%.

Group of orthologs #597. Best score 246 bits
Score difference with first non-orthologous sequence - A.carolinensis:246 P.jiroveci:246

G1KBN9              	100.00%		L0PD38              	100.00%
G1KVB1              	18.15%		
Bootstrap support for G1KBN9 as seed ortholog is 100%.
Bootstrap support for L0PD38 as seed ortholog is 100%.

Group of orthologs #598. Best score 246 bits
Score difference with first non-orthologous sequence - A.carolinensis:246 P.jiroveci:142

G1K9Z4              	100.00%		L0PBV6              	100.00%
Bootstrap support for G1K9Z4 as seed ortholog is 100%.
Bootstrap support for L0PBV6 as seed ortholog is 100%.

Group of orthologs #599. Best score 246 bits
Score difference with first non-orthologous sequence - A.carolinensis:199 P.jiroveci:246

G1K9D7              	100.00%		L0PFC0              	100.00%
Bootstrap support for G1K9D7 as seed ortholog is 100%.
Bootstrap support for L0PFC0 as seed ortholog is 100%.

Group of orthologs #600. Best score 246 bits
Score difference with first non-orthologous sequence - A.carolinensis:101 P.jiroveci:201

G1KHM0              	100.00%		L0PA17              	100.00%
Bootstrap support for G1KHM0 as seed ortholog is 100%.
Bootstrap support for L0PA17 as seed ortholog is 100%.

Group of orthologs #601. Best score 246 bits
Score difference with first non-orthologous sequence - A.carolinensis:101 P.jiroveci:246

G1KHF7              	100.00%		L0PAG1              	100.00%
Bootstrap support for G1KHF7 as seed ortholog is 99%.
Bootstrap support for L0PAG1 as seed ortholog is 100%.

Group of orthologs #602. Best score 246 bits
Score difference with first non-orthologous sequence - A.carolinensis:125 P.jiroveci:246

G1KMN2              	100.00%		L0PAM8              	100.00%
Bootstrap support for G1KMN2 as seed ortholog is 99%.
Bootstrap support for L0PAM8 as seed ortholog is 100%.

Group of orthologs #603. Best score 246 bits
Score difference with first non-orthologous sequence - A.carolinensis:246 P.jiroveci:246

H9GDH3              	100.00%		L0PAG8              	100.00%
Bootstrap support for H9GDH3 as seed ortholog is 100%.
Bootstrap support for L0PAG8 as seed ortholog is 100%.

Group of orthologs #604. Best score 246 bits
Score difference with first non-orthologous sequence - A.carolinensis:246 P.jiroveci:246

H9GQ08              	100.00%		L0PCG1              	100.00%
Bootstrap support for H9GQ08 as seed ortholog is 100%.
Bootstrap support for L0PCG1 as seed ortholog is 100%.

Group of orthologs #605. Best score 245 bits
Score difference with first non-orthologous sequence - A.carolinensis:245 P.jiroveci:245

G1KA50              	100.00%		L0PBA4              	100.00%
Bootstrap support for G1KA50 as seed ortholog is 100%.
Bootstrap support for L0PBA4 as seed ortholog is 100%.

Group of orthologs #606. Best score 245 bits
Score difference with first non-orthologous sequence - A.carolinensis:245 P.jiroveci:245

H9GNW4              	100.00%		L0P9P0              	100.00%
Bootstrap support for H9GNW4 as seed ortholog is 100%.
Bootstrap support for L0P9P0 as seed ortholog is 100%.

Group of orthologs #607. Best score 245 bits
Score difference with first non-orthologous sequence - A.carolinensis:245 P.jiroveci:245

H9GT63              	100.00%		L0P720              	100.00%
Bootstrap support for H9GT63 as seed ortholog is 100%.
Bootstrap support for L0P720 as seed ortholog is 100%.

Group of orthologs #608. Best score 245 bits
Score difference with first non-orthologous sequence - A.carolinensis:245 P.jiroveci:245

H9GN10              	100.00%		L0PD02              	100.00%
Bootstrap support for H9GN10 as seed ortholog is 100%.
Bootstrap support for L0PD02 as seed ortholog is 100%.

Group of orthologs #609. Best score 245 bits
Score difference with first non-orthologous sequence - A.carolinensis:245 P.jiroveci:166

H9GPQ0              	100.00%		L0PG93              	100.00%
Bootstrap support for H9GPQ0 as seed ortholog is 100%.
Bootstrap support for L0PG93 as seed ortholog is 99%.

Group of orthologs #610. Best score 244 bits
Score difference with first non-orthologous sequence - A.carolinensis:244 P.jiroveci:244

G1KCN3              	100.00%		L0P723              	100.00%
Bootstrap support for G1KCN3 as seed ortholog is 100%.
Bootstrap support for L0P723 as seed ortholog is 100%.

Group of orthologs #611. Best score 243 bits
Score difference with first non-orthologous sequence - A.carolinensis:61 P.jiroveci:171

H9GNH8              	100.00%		L0PB10              	100.00%
Bootstrap support for H9GNH8 as seed ortholog is 97%.
Bootstrap support for L0PB10 as seed ortholog is 100%.

Group of orthologs #612. Best score 242 bits
Score difference with first non-orthologous sequence - A.carolinensis:184 P.jiroveci:242

G1KTV1              	100.00%		L0P7P7              	100.00%
Bootstrap support for G1KTV1 as seed ortholog is 100%.
Bootstrap support for L0P7P7 as seed ortholog is 100%.

Group of orthologs #613. Best score 242 bits
Score difference with first non-orthologous sequence - A.carolinensis:242 P.jiroveci:242

G1KP81              	100.00%		L0PEC6              	100.00%
Bootstrap support for G1KP81 as seed ortholog is 100%.
Bootstrap support for L0PEC6 as seed ortholog is 100%.

Group of orthologs #614. Best score 241 bits
Score difference with first non-orthologous sequence - A.carolinensis:241 P.jiroveci:241

G1K8Q9              	100.00%		L0PDI2              	100.00%
Bootstrap support for G1K8Q9 as seed ortholog is 100%.
Bootstrap support for L0PDI2 as seed ortholog is 100%.

Group of orthologs #615. Best score 241 bits
Score difference with first non-orthologous sequence - A.carolinensis:241 P.jiroveci:241

G1KBW8              	100.00%		L0PHK5              	100.00%
Bootstrap support for G1KBW8 as seed ortholog is 100%.
Bootstrap support for L0PHK5 as seed ortholog is 100%.

Group of orthologs #616. Best score 241 bits
Score difference with first non-orthologous sequence - A.carolinensis:241 P.jiroveci:241

H9GHG3              	100.00%		L0P7H2              	100.00%
Bootstrap support for H9GHG3 as seed ortholog is 100%.
Bootstrap support for L0P7H2 as seed ortholog is 100%.

Group of orthologs #617. Best score 241 bits
Score difference with first non-orthologous sequence - A.carolinensis:241 P.jiroveci:241

H9GLL6              	100.00%		L0P896              	100.00%
Bootstrap support for H9GLL6 as seed ortholog is 100%.
Bootstrap support for L0P896 as seed ortholog is 100%.

Group of orthologs #618. Best score 240 bits
Score difference with first non-orthologous sequence - A.carolinensis:240 P.jiroveci:240

H9G5L9              	100.00%		L0PG68              	100.00%
Bootstrap support for H9G5L9 as seed ortholog is 100%.
Bootstrap support for L0PG68 as seed ortholog is 100%.

Group of orthologs #619. Best score 240 bits
Score difference with first non-orthologous sequence - A.carolinensis:240 P.jiroveci:240

H9GAG2              	100.00%		L0PF73              	100.00%
Bootstrap support for H9GAG2 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #620. Best score 239 bits
Score difference with first non-orthologous sequence - A.carolinensis:138 P.jiroveci:239

H9G7H9              	100.00%		L0P9F9              	100.00%
Bootstrap support for H9G7H9 as seed ortholog is 100%.
Bootstrap support for L0P9F9 as seed ortholog is 100%.

Group of orthologs #621. Best score 239 bits
Score difference with first non-orthologous sequence - A.carolinensis:239 P.jiroveci:239

H9GM39              	100.00%		L0P834              	100.00%
Bootstrap support for H9GM39 as seed ortholog is 100%.
Bootstrap support for L0P834 as seed ortholog is 100%.

Group of orthologs #622. Best score 238 bits
Score difference with first non-orthologous sequence - A.carolinensis:151 P.jiroveci:164

H9G6I9              	100.00%		L0PFE3              	100.00%
H9GLY2              	39.04%		
G1KT62              	37.93%		
G1KTF0              	35.59%		
Bootstrap support for H9G6I9 as seed ortholog is 99%.
Bootstrap support for L0PFE3 as seed ortholog is 99%.

Group of orthologs #623. Best score 237 bits
Score difference with first non-orthologous sequence - A.carolinensis:237 P.jiroveci:237

H9GI93              	100.00%		L0PCH0              	100.00%
H9GC24              	31.19%		
Bootstrap support for H9GI93 as seed ortholog is 100%.
Bootstrap support for L0PCH0 as seed ortholog is 100%.

Group of orthologs #624. Best score 237 bits
Score difference with first non-orthologous sequence - A.carolinensis:237 P.jiroveci:237

H9G6W8              	100.00%		L0PE58              	100.00%
Bootstrap support for H9G6W8 as seed ortholog is 100%.
Bootstrap support for L0PE58 as seed ortholog is 100%.

Group of orthologs #625. Best score 237 bits
Score difference with first non-orthologous sequence - A.carolinensis:237 P.jiroveci:105

H9GLA3              	100.00%		L0P9G1              	100.00%
Bootstrap support for H9GLA3 as seed ortholog is 100%.
Bootstrap support for L0P9G1 as seed ortholog is 99%.

Group of orthologs #626. Best score 237 bits
Score difference with first non-orthologous sequence - A.carolinensis:237 P.jiroveci:237

H9GMJ6              	100.00%		L0PGQ4              	100.00%
Bootstrap support for H9GMJ6 as seed ortholog is 100%.
Bootstrap support for L0PGQ4 as seed ortholog is 100%.

Group of orthologs #627. Best score 236 bits
Score difference with first non-orthologous sequence - A.carolinensis:236 P.jiroveci:86

H9GLF3              	100.00%		L0PG10              	100.00%
Bootstrap support for H9GLF3 as seed ortholog is 100%.
Bootstrap support for L0PG10 as seed ortholog is 99%.

Group of orthologs #628. Best score 235 bits
Score difference with first non-orthologous sequence - A.carolinensis:235 P.jiroveci:235

H9GLR1              	100.00%		L0PBZ6              	100.00%
Bootstrap support for H9GLR1 as seed ortholog is 100%.
Bootstrap support for L0PBZ6 as seed ortholog is 100%.

Group of orthologs #629. Best score 234 bits
Score difference with first non-orthologous sequence - A.carolinensis:234 P.jiroveci:234

G1KIG2              	100.00%		L0P8F0              	100.00%
Bootstrap support for G1KIG2 as seed ortholog is 100%.
Bootstrap support for L0P8F0 as seed ortholog is 100%.

Group of orthologs #630. Best score 234 bits
Score difference with first non-orthologous sequence - A.carolinensis:234 P.jiroveci:234

G1KL50              	100.00%		L0P968              	100.00%
Bootstrap support for G1KL50 as seed ortholog is 100%.
Bootstrap support for L0P968 as seed ortholog is 100%.

Group of orthologs #631. Best score 234 bits
Score difference with first non-orthologous sequence - A.carolinensis:234 P.jiroveci:234

G1KJU1              	100.00%		L0PAZ5              	100.00%
Bootstrap support for G1KJU1 as seed ortholog is 100%.
Bootstrap support for L0PAZ5 as seed ortholog is 100%.

Group of orthologs #632. Best score 234 bits
Score difference with first non-orthologous sequence - A.carolinensis:234 P.jiroveci:234

H9G4I5              	100.00%		L0P9K2              	100.00%
Bootstrap support for H9G4I5 as seed ortholog is 100%.
Bootstrap support for L0P9K2 as seed ortholog is 100%.

Group of orthologs #633. Best score 233 bits
Score difference with first non-orthologous sequence - A.carolinensis:233 P.jiroveci:233

G1KFY2              	100.00%		L0PFZ1              	100.00%
G1K899              	44.58%		
Bootstrap support for G1KFY2 as seed ortholog is 100%.
Bootstrap support for L0PFZ1 as seed ortholog is 100%.

Group of orthologs #634. Best score 233 bits
Score difference with first non-orthologous sequence - A.carolinensis:233 P.jiroveci:233

G1K8X1              	100.00%		L0P9L7              	100.00%
Bootstrap support for G1K8X1 as seed ortholog is 100%.
Bootstrap support for L0P9L7 as seed ortholog is 100%.

Group of orthologs #635. Best score 233 bits
Score difference with first non-orthologous sequence - A.carolinensis:233 P.jiroveci:233

H9GLS5              	100.00%		L0P8K8              	100.00%
Bootstrap support for H9GLS5 as seed ortholog is 100%.
Bootstrap support for L0P8K8 as seed ortholog is 100%.

Group of orthologs #636. Best score 232 bits
Score difference with first non-orthologous sequence - A.carolinensis:64 P.jiroveci:232

G1KMH4              	100.00%		L0PC75              	100.00%
G1KI94              	83.33%		
H9G6A0              	22.84%		
Bootstrap support for G1KMH4 as seed ortholog is 99%.
Bootstrap support for L0PC75 as seed ortholog is 100%.

Group of orthologs #637. Best score 232 bits
Score difference with first non-orthologous sequence - A.carolinensis:116 P.jiroveci:151

G1K9G3              	100.00%		L0PGN9              	100.00%
H9GHB4              	91.36%		
Bootstrap support for G1K9G3 as seed ortholog is 99%.
Bootstrap support for L0PGN9 as seed ortholog is 99%.

Group of orthologs #638. Best score 232 bits
Score difference with first non-orthologous sequence - A.carolinensis:54 P.jiroveci:48

G1KSK4              	100.00%		L0PFJ7              	100.00%
Bootstrap support for G1KSK4 as seed ortholog is 92%.
Bootstrap support for L0PFJ7 as seed ortholog is 81%.

Group of orthologs #639. Best score 231 bits
Score difference with first non-orthologous sequence - A.carolinensis:155 P.jiroveci:231

G1KJK7              	100.00%		L0PFQ3              	100.00%
Bootstrap support for G1KJK7 as seed ortholog is 100%.
Bootstrap support for L0PFQ3 as seed ortholog is 100%.

Group of orthologs #640. Best score 230 bits
Score difference with first non-orthologous sequence - A.carolinensis:139 P.jiroveci:230

H9GCS7              	100.00%		L0PEQ4              	100.00%
H9GUD4              	33.43%		
Bootstrap support for H9GCS7 as seed ortholog is 100%.
Bootstrap support for L0PEQ4 as seed ortholog is 100%.

Group of orthologs #641. Best score 230 bits
Score difference with first non-orthologous sequence - A.carolinensis:18 P.jiroveci:230

G1KJY1              	100.00%		L0P9R8              	100.00%
Bootstrap support for G1KJY1 as seed ortholog is 57%.
Alternative seed ortholog is H9GMP6 (18 bits away from this cluster)
Bootstrap support for L0P9R8 as seed ortholog is 100%.

Group of orthologs #642. Best score 230 bits
Score difference with first non-orthologous sequence - A.carolinensis:230 P.jiroveci:230

G1KKV8              	100.00%		L0PHL1              	100.00%
Bootstrap support for G1KKV8 as seed ortholog is 100%.
Bootstrap support for L0PHL1 as seed ortholog is 100%.

Group of orthologs #643. Best score 230 bits
Score difference with first non-orthologous sequence - A.carolinensis:185 P.jiroveci:230

G1KU55              	100.00%		L0PD44              	100.00%
Bootstrap support for G1KU55 as seed ortholog is 100%.
Bootstrap support for L0PD44 as seed ortholog is 100%.

Group of orthologs #644. Best score 230 bits
Score difference with first non-orthologous sequence - A.carolinensis:230 P.jiroveci:230

H9GCL0              	100.00%		L0PEW5              	100.00%
Bootstrap support for H9GCL0 as seed ortholog is 100%.
Bootstrap support for L0PEW5 as seed ortholog is 100%.

Group of orthologs #645. Best score 230 bits
Score difference with first non-orthologous sequence - A.carolinensis:230 P.jiroveci:230

H9GJN0              	100.00%		L0P9I2              	100.00%
Bootstrap support for H9GJN0 as seed ortholog is 100%.
Bootstrap support for L0P9I2 as seed ortholog is 100%.

Group of orthologs #646. Best score 229 bits
Score difference with first non-orthologous sequence - A.carolinensis:126 P.jiroveci:229

G1KMN0              	100.00%		L0PCI8              	100.00%
H9GDP6              	50.10%		
H9GBN7              	45.11%		
H9G7M5              	42.00%		
Bootstrap support for G1KMN0 as seed ortholog is 99%.
Bootstrap support for L0PCI8 as seed ortholog is 100%.

Group of orthologs #647. Best score 229 bits
Score difference with first non-orthologous sequence - A.carolinensis:229 P.jiroveci:229

G1KIC8              	100.00%		L0PH55              	100.00%
Bootstrap support for G1KIC8 as seed ortholog is 100%.
Bootstrap support for L0PH55 as seed ortholog is 100%.

Group of orthologs #648. Best score 229 bits
Score difference with first non-orthologous sequence - A.carolinensis:229 P.jiroveci:229

G1KJT6              	100.00%		L0PG81              	100.00%
Bootstrap support for G1KJT6 as seed ortholog is 100%.
Bootstrap support for L0PG81 as seed ortholog is 100%.

Group of orthologs #649. Best score 228 bits
Score difference with first non-orthologous sequence - A.carolinensis:228 P.jiroveci:228

G1K936              	100.00%		L0P9N2              	100.00%
Bootstrap support for G1K936 as seed ortholog is 100%.
Bootstrap support for L0P9N2 as seed ortholog is 100%.

Group of orthologs #650. Best score 228 bits
Score difference with first non-orthologous sequence - A.carolinensis:228 P.jiroveci:228

H9GMH9              	100.00%		L0P9Y7              	100.00%
Bootstrap support for H9GMH9 as seed ortholog is 100%.
Bootstrap support for L0P9Y7 as seed ortholog is 100%.

Group of orthologs #651. Best score 227 bits
Score difference with first non-orthologous sequence - A.carolinensis:143 P.jiroveci:227

G1KA05              	100.00%		L0P9I3              	100.00%
Bootstrap support for G1KA05 as seed ortholog is 99%.
Bootstrap support for L0P9I3 as seed ortholog is 100%.

Group of orthologs #652. Best score 227 bits
Score difference with first non-orthologous sequence - A.carolinensis:227 P.jiroveci:227

G1KQT0              	100.00%		L0PA05              	100.00%
Bootstrap support for G1KQT0 as seed ortholog is 100%.
Bootstrap support for L0PA05 as seed ortholog is 100%.

Group of orthologs #653. Best score 227 bits
Score difference with first non-orthologous sequence - A.carolinensis:227 P.jiroveci:227

G1KP93              	100.00%		L0PFE6              	100.00%
Bootstrap support for G1KP93 as seed ortholog is 100%.
Bootstrap support for L0PFE6 as seed ortholog is 100%.

Group of orthologs #654. Best score 226 bits
Score difference with first non-orthologous sequence - A.carolinensis:61 P.jiroveci:77

G1KDU2              	100.00%		L0PGE5              	100.00%
G1KUK1              	100.00%		
G1KHL8              	93.53%		
G1KKD6              	63.53%		
Bootstrap support for G1KDU2 as seed ortholog is 99%.
Bootstrap support for G1KUK1 as seed ortholog is 99%.
Bootstrap support for L0PGE5 as seed ortholog is 99%.

Group of orthologs #655. Best score 226 bits
Score difference with first non-orthologous sequence - A.carolinensis:84 P.jiroveci:226

H9GL94              	100.00%		L0P848              	100.00%
H9GJT3              	39.00%		L0P867              	89.56%
Bootstrap support for H9GL94 as seed ortholog is 98%.
Bootstrap support for L0P848 as seed ortholog is 100%.

Group of orthologs #656. Best score 226 bits
Score difference with first non-orthologous sequence - A.carolinensis:226 P.jiroveci:226

G1KAJ4              	100.00%		L0PFR9              	100.00%
Bootstrap support for G1KAJ4 as seed ortholog is 100%.
Bootstrap support for L0PFR9 as seed ortholog is 100%.

Group of orthologs #657. Best score 225 bits
Score difference with first non-orthologous sequence - A.carolinensis:225 P.jiroveci:225

G1K874              	100.00%		L0PBS5              	100.00%
Bootstrap support for G1K874 as seed ortholog is 100%.
Bootstrap support for L0PBS5 as seed ortholog is 100%.

Group of orthologs #658. Best score 225 bits
Score difference with first non-orthologous sequence - A.carolinensis:225 P.jiroveci:225

G1KTZ1              	100.00%		L0PEM0              	100.00%
Bootstrap support for G1KTZ1 as seed ortholog is 100%.
Bootstrap support for L0PEM0 as seed ortholog is 100%.

Group of orthologs #659. Best score 224 bits
Score difference with first non-orthologous sequence - A.carolinensis:224 P.jiroveci:224

G1K9A2              	100.00%		L0PCU0              	100.00%
Bootstrap support for G1K9A2 as seed ortholog is 100%.
Bootstrap support for L0PCU0 as seed ortholog is 100%.

Group of orthologs #660. Best score 224 bits
Score difference with first non-orthologous sequence - A.carolinensis:224 P.jiroveci:224

H9GEL9              	100.00%		L0PDP2              	100.00%
Bootstrap support for H9GEL9 as seed ortholog is 100%.
Bootstrap support for L0PDP2 as seed ortholog is 100%.

Group of orthologs #661. Best score 223 bits
Score difference with first non-orthologous sequence - A.carolinensis:148 P.jiroveci:223

G1KNG5              	100.00%		L0PAW4              	100.00%
G1KI92              	56.56%		
Bootstrap support for G1KNG5 as seed ortholog is 100%.
Bootstrap support for L0PAW4 as seed ortholog is 100%.

Group of orthologs #662. Best score 223 bits
Score difference with first non-orthologous sequence - A.carolinensis:223 P.jiroveci:223

G1K9D5              	100.00%		L0PAL5              	100.00%
Bootstrap support for G1K9D5 as seed ortholog is 100%.
Bootstrap support for L0PAL5 as seed ortholog is 100%.

Group of orthologs #663. Best score 223 bits
Score difference with first non-orthologous sequence - A.carolinensis:223 P.jiroveci:223

H9G6E9              	100.00%		L0P901              	100.00%
Bootstrap support for H9G6E9 as seed ortholog is 100%.
Bootstrap support for L0P901 as seed ortholog is 100%.

Group of orthologs #664. Best score 223 bits
Score difference with first non-orthologous sequence - A.carolinensis:223 P.jiroveci:223

H9G6L8              	100.00%		L0PGE7              	100.00%
Bootstrap support for H9G6L8 as seed ortholog is 100%.
Bootstrap support for L0PGE7 as seed ortholog is 100%.

Group of orthologs #665. Best score 222 bits
Score difference with first non-orthologous sequence - A.carolinensis:222 P.jiroveci:222

G1KAL4              	100.00%		L0PAJ0              	100.00%
L7MZQ1              	39.82%		
G1KY95              	17.70%		
Bootstrap support for G1KAL4 as seed ortholog is 100%.
Bootstrap support for L0PAJ0 as seed ortholog is 100%.

Group of orthologs #666. Best score 222 bits
Score difference with first non-orthologous sequence - A.carolinensis:222 P.jiroveci:222

G1KTG9              	100.00%		L0PI61              	100.00%
G1KUI3              	58.14%		L0PA50              	18.89%
Bootstrap support for G1KTG9 as seed ortholog is 100%.
Bootstrap support for L0PI61 as seed ortholog is 100%.

Group of orthologs #667. Best score 222 bits
Score difference with first non-orthologous sequence - A.carolinensis:222 P.jiroveci:222

G1KJL2              	100.00%		L0PA36              	100.00%
Bootstrap support for G1KJL2 as seed ortholog is 100%.
Bootstrap support for L0PA36 as seed ortholog is 100%.

Group of orthologs #668. Best score 222 bits
Score difference with first non-orthologous sequence - A.carolinensis:222 P.jiroveci:222

H9GCE9              	100.00%		L0PBT0              	100.00%
Bootstrap support for H9GCE9 as seed ortholog is 100%.
Bootstrap support for L0PBT0 as seed ortholog is 100%.

Group of orthologs #669. Best score 222 bits
Score difference with first non-orthologous sequence - A.carolinensis:222 P.jiroveci:222

H9GHZ9              	100.00%		L0PEJ3              	100.00%
Bootstrap support for H9GHZ9 as seed ortholog is 100%.
Bootstrap support for L0PEJ3 as seed ortholog is 100%.

Group of orthologs #670. Best score 220 bits
Score difference with first non-orthologous sequence - A.carolinensis:97 P.jiroveci:161

H9G954              	100.00%		L0PHW8              	100.00%
Bootstrap support for H9G954 as seed ortholog is 100%.
Bootstrap support for L0PHW8 as seed ortholog is 100%.

Group of orthologs #671. Best score 219 bits
Score difference with first non-orthologous sequence - A.carolinensis:219 P.jiroveci:219

G1KQP4              	100.00%		L0PDL5              	100.00%
H9GK67              	70.90%		
G1KLD7              	69.05%		
Bootstrap support for G1KQP4 as seed ortholog is 100%.
Bootstrap support for L0PDL5 as seed ortholog is 100%.

Group of orthologs #672. Best score 219 bits
Score difference with first non-orthologous sequence - A.carolinensis:149 P.jiroveci:219

G1K996              	100.00%		L0PE77              	100.00%
Bootstrap support for G1K996 as seed ortholog is 100%.
Bootstrap support for L0PE77 as seed ortholog is 100%.

Group of orthologs #673. Best score 219 bits
Score difference with first non-orthologous sequence - A.carolinensis:125 P.jiroveci:157

G1KTR0              	100.00%		L0PAF0              	100.00%
Bootstrap support for G1KTR0 as seed ortholog is 99%.
Bootstrap support for L0PAF0 as seed ortholog is 99%.

Group of orthologs #674. Best score 218 bits
Score difference with first non-orthologous sequence - A.carolinensis:218 P.jiroveci:218

G1KU14              	100.00%		L0P9U1              	100.00%
G1KP11              	97.75%		
Bootstrap support for G1KU14 as seed ortholog is 100%.
Bootstrap support for L0P9U1 as seed ortholog is 100%.

Group of orthologs #675. Best score 218 bits
Score difference with first non-orthologous sequence - A.carolinensis:135 P.jiroveci:218

H9G7T9              	100.00%		L0P858              	100.00%
                    	       		L0PDX5              	68.85%
Bootstrap support for H9G7T9 as seed ortholog is 99%.
Bootstrap support for L0P858 as seed ortholog is 100%.

Group of orthologs #676. Best score 218 bits
Score difference with first non-orthologous sequence - A.carolinensis:218 P.jiroveci:218

G1KBE1              	100.00%		L0PFL8              	100.00%
Bootstrap support for G1KBE1 as seed ortholog is 100%.
Bootstrap support for L0PFL8 as seed ortholog is 100%.

Group of orthologs #677. Best score 218 bits
Score difference with first non-orthologous sequence - A.carolinensis:218 P.jiroveci:218

H9G543              	100.00%		L0PA86              	100.00%
Bootstrap support for H9G543 as seed ortholog is 100%.
Bootstrap support for L0PA86 as seed ortholog is 100%.

Group of orthologs #678. Best score 218 bits
Score difference with first non-orthologous sequence - A.carolinensis:218 P.jiroveci:218

H9G7J8              	100.00%		L0PGJ8              	100.00%
Bootstrap support for H9G7J8 as seed ortholog is 100%.
Bootstrap support for L0PGJ8 as seed ortholog is 100%.

Group of orthologs #679. Best score 218 bits
Score difference with first non-orthologous sequence - A.carolinensis:52 P.jiroveci:168

H9GLW3              	100.00%		L0PHH9              	100.00%
Bootstrap support for H9GLW3 as seed ortholog is 98%.
Bootstrap support for L0PHH9 as seed ortholog is 100%.

Group of orthologs #680. Best score 217 bits
Score difference with first non-orthologous sequence - A.carolinensis:217 P.jiroveci:217

H9GCK5              	100.00%		L0PDX6              	100.00%
Bootstrap support for H9GCK5 as seed ortholog is 100%.
Bootstrap support for L0PDX6 as seed ortholog is 100%.

Group of orthologs #681. Best score 217 bits
Score difference with first non-orthologous sequence - A.carolinensis:104 P.jiroveci:217

H9GGP4              	100.00%		L0PD63              	100.00%
Bootstrap support for H9GGP4 as seed ortholog is 100%.
Bootstrap support for L0PD63 as seed ortholog is 100%.

Group of orthologs #682. Best score 216 bits
Score difference with first non-orthologous sequence - A.carolinensis:84 P.jiroveci:216

G1KCR3              	100.00%		L0P9G0              	100.00%
G1KDV8              	9.42%		
G1KGF4              	9.28%		
Bootstrap support for G1KCR3 as seed ortholog is 95%.
Bootstrap support for L0P9G0 as seed ortholog is 100%.

Group of orthologs #683. Best score 215 bits
Score difference with first non-orthologous sequence - A.carolinensis:215 P.jiroveci:109

G1K9X5              	100.00%		L0PFD8              	100.00%
G1KGD5              	28.09%		
G1KS75              	20.15%		
Bootstrap support for G1K9X5 as seed ortholog is 100%.
Bootstrap support for L0PFD8 as seed ortholog is 99%.

Group of orthologs #684. Best score 215 bits
Score difference with first non-orthologous sequence - A.carolinensis:215 P.jiroveci:215

G1KCP6              	100.00%		L0PCR8              	100.00%
                    	       		L0PH75              	91.41%
Bootstrap support for G1KCP6 as seed ortholog is 100%.
Bootstrap support for L0PCR8 as seed ortholog is 100%.

Group of orthologs #685. Best score 215 bits
Score difference with first non-orthologous sequence - A.carolinensis:141 P.jiroveci:215

G1KNE8              	100.00%		L0PB84              	100.00%
Bootstrap support for G1KNE8 as seed ortholog is 100%.
Bootstrap support for L0PB84 as seed ortholog is 100%.

Group of orthologs #686. Best score 215 bits
Score difference with first non-orthologous sequence - A.carolinensis:215 P.jiroveci:215

G1KU96              	100.00%		L0PD58              	100.00%
Bootstrap support for G1KU96 as seed ortholog is 100%.
Bootstrap support for L0PD58 as seed ortholog is 100%.

Group of orthologs #687. Best score 214 bits
Score difference with first non-orthologous sequence - A.carolinensis:214 P.jiroveci:214

G1KA45              	100.00%		L0PCF4              	100.00%
G1KA95              	45.54%		L0P926              	60.67%
Bootstrap support for G1KA45 as seed ortholog is 100%.
Bootstrap support for L0PCF4 as seed ortholog is 100%.

Group of orthologs #688. Best score 214 bits
Score difference with first non-orthologous sequence - A.carolinensis:214 P.jiroveci:214

G1K9I4              	100.00%		L0PFU0              	100.00%
Bootstrap support for G1K9I4 as seed ortholog is 100%.
Bootstrap support for L0PFU0 as seed ortholog is 100%.

Group of orthologs #689. Best score 214 bits
Score difference with first non-orthologous sequence - A.carolinensis:214 P.jiroveci:214

G1KT52              	100.00%		L0PG39              	100.00%
Bootstrap support for G1KT52 as seed ortholog is 100%.
Bootstrap support for L0PG39 as seed ortholog is 100%.

Group of orthologs #690. Best score 214 bits
Score difference with first non-orthologous sequence - A.carolinensis:121 P.jiroveci:136

H9G6B8              	100.00%		L0PBK1              	100.00%
Bootstrap support for H9G6B8 as seed ortholog is 99%.
Bootstrap support for L0PBK1 as seed ortholog is 99%.

Group of orthologs #691. Best score 214 bits
Score difference with first non-orthologous sequence - A.carolinensis:166 P.jiroveci:118

H9G9J7              	100.00%		L0PDB2              	100.00%
Bootstrap support for H9G9J7 as seed ortholog is 99%.
Bootstrap support for L0PDB2 as seed ortholog is 99%.

Group of orthologs #692. Best score 213 bits
Score difference with first non-orthologous sequence - A.carolinensis:38 P.jiroveci:213

G1KKD1              	100.00%		L0PIP5              	100.00%
Bootstrap support for G1KKD1 as seed ortholog is 85%.
Bootstrap support for L0PIP5 as seed ortholog is 100%.

Group of orthologs #693. Best score 212 bits
Score difference with first non-orthologous sequence - A.carolinensis:78 P.jiroveci:155

H9GK45              	100.00%		L0P8M4              	100.00%
G1K8R8              	74.67%		
H9GDR1              	18.67%		
Bootstrap support for H9GK45 as seed ortholog is 99%.
Bootstrap support for L0P8M4 as seed ortholog is 99%.

Group of orthologs #694. Best score 212 bits
Score difference with first non-orthologous sequence - A.carolinensis:108 P.jiroveci:212

G1KJL4              	100.00%		L0P839              	100.00%
Bootstrap support for G1KJL4 as seed ortholog is 100%.
Bootstrap support for L0P839 as seed ortholog is 100%.

Group of orthologs #695. Best score 212 bits
Score difference with first non-orthologous sequence - A.carolinensis:84 P.jiroveci:212

H9G3I7              	100.00%		L0PE21              	100.00%
Bootstrap support for H9G3I7 as seed ortholog is 97%.
Bootstrap support for L0PE21 as seed ortholog is 100%.

Group of orthologs #696. Best score 211 bits
Score difference with first non-orthologous sequence - A.carolinensis:93 P.jiroveci:95

H9GM06              	100.00%		L0PGH8              	100.00%
H9GMF1              	67.25%		
H9GGV0              	27.18%		
Bootstrap support for H9GM06 as seed ortholog is 99%.
Bootstrap support for L0PGH8 as seed ortholog is 99%.

Group of orthologs #697. Best score 211 bits
Score difference with first non-orthologous sequence - A.carolinensis:84 P.jiroveci:211

G1KA01              	100.00%		L0PGL3              	100.00%
H9GPD8              	43.64%		
Bootstrap support for G1KA01 as seed ortholog is 98%.
Bootstrap support for L0PGL3 as seed ortholog is 100%.

Group of orthologs #698. Best score 211 bits
Score difference with first non-orthologous sequence - A.carolinensis:211 P.jiroveci:211

G1KMG4              	100.00%		L0PBB0              	100.00%
G1KYQ9              	15.34%		
Bootstrap support for G1KMG4 as seed ortholog is 100%.
Bootstrap support for L0PBB0 as seed ortholog is 100%.

Group of orthologs #699. Best score 211 bits
Score difference with first non-orthologous sequence - A.carolinensis:211 P.jiroveci:211

H9GEI1              	100.00%		L0PG86              	100.00%
Bootstrap support for H9GEI1 as seed ortholog is 100%.
Bootstrap support for L0PG86 as seed ortholog is 100%.

Group of orthologs #700. Best score 211 bits
Score difference with first non-orthologous sequence - A.carolinensis:211 P.jiroveci:211

H9GGV4              	100.00%		L0PFP0              	100.00%
Bootstrap support for H9GGV4 as seed ortholog is 100%.
Bootstrap support for L0PFP0 as seed ortholog is 100%.

Group of orthologs #701. Best score 210 bits
Score difference with first non-orthologous sequence - A.carolinensis:87 P.jiroveci:128

H9GDZ9              	100.00%		L0PFN2              	100.00%
H9GRN3              	37.08%		
Bootstrap support for H9GDZ9 as seed ortholog is 100%.
Bootstrap support for L0PFN2 as seed ortholog is 100%.

Group of orthologs #702. Best score 210 bits
Score difference with first non-orthologous sequence - A.carolinensis:210 P.jiroveci:210

G1KNC6              	100.00%		L0P919              	100.00%
Bootstrap support for G1KNC6 as seed ortholog is 100%.
Bootstrap support for L0P919 as seed ortholog is 100%.

Group of orthologs #703. Best score 210 bits
Score difference with first non-orthologous sequence - A.carolinensis:210 P.jiroveci:210

G1KRF8              	100.00%		L0PC53              	100.00%
Bootstrap support for G1KRF8 as seed ortholog is 100%.
Bootstrap support for L0PC53 as seed ortholog is 100%.

Group of orthologs #704. Best score 210 bits
Score difference with first non-orthologous sequence - A.carolinensis:210 P.jiroveci:210

H9GN46              	100.00%		L0PGN8              	100.00%
Bootstrap support for H9GN46 as seed ortholog is 100%.
Bootstrap support for L0PGN8 as seed ortholog is 100%.

Group of orthologs #705. Best score 209 bits
Score difference with first non-orthologous sequence - A.carolinensis:163 P.jiroveci:209

G1KJ42              	100.00%		L0P9D6              	100.00%
G1KVP9              	95.96%		
Bootstrap support for G1KJ42 as seed ortholog is 100%.
Bootstrap support for L0P9D6 as seed ortholog is 100%.

Group of orthologs #706. Best score 209 bits
Score difference with first non-orthologous sequence - A.carolinensis:209 P.jiroveci:209

G1KS44              	100.00%		L0PD65              	100.00%
H9G4C4              	37.04%		
Bootstrap support for G1KS44 as seed ortholog is 100%.
Bootstrap support for L0PD65 as seed ortholog is 100%.

Group of orthologs #707. Best score 208 bits
Score difference with first non-orthologous sequence - A.carolinensis:51 P.jiroveci:12

G1KEK3              	100.00%		L0PCN5              	100.00%
G1KII7              	28.48%		L0P7B6              	92.63%
G1KJJ4              	25.85%		
G1KHQ5              	9.19%		
H9GCJ3              	6.96%		
H9G5F3              	6.82%		
G1KE65              	6.30%		
Bootstrap support for G1KEK3 as seed ortholog is 89%.
Bootstrap support for L0PCN5 as seed ortholog is 63%.
Alternative seed ortholog is L0PGT4 (12 bits away from this cluster)

Group of orthologs #708. Best score 208 bits
Score difference with first non-orthologous sequence - A.carolinensis:208 P.jiroveci:208

G1KS81              	100.00%		L0PC20              	100.00%
H9GKT4              	32.42%		
Bootstrap support for G1KS81 as seed ortholog is 100%.
Bootstrap support for L0PC20 as seed ortholog is 100%.

Group of orthologs #709. Best score 208 bits
Score difference with first non-orthologous sequence - A.carolinensis:137 P.jiroveci:208

G1KR85              	100.00%		L0PBD5              	100.00%
Bootstrap support for G1KR85 as seed ortholog is 99%.
Bootstrap support for L0PBD5 as seed ortholog is 100%.

Group of orthologs #710. Best score 208 bits
Score difference with first non-orthologous sequence - A.carolinensis:99 P.jiroveci:208

H9G3P3              	100.00%		L0PF53              	100.00%
Bootstrap support for H9G3P3 as seed ortholog is 99%.
Bootstrap support for L0PF53 as seed ortholog is 100%.

Group of orthologs #711. Best score 208 bits
Score difference with first non-orthologous sequence - A.carolinensis:144 P.jiroveci:132

H9G820              	100.00%		L0PAZ8              	100.00%
Bootstrap support for H9G820 as seed ortholog is 100%.
Bootstrap support for L0PAZ8 as seed ortholog is 99%.

Group of orthologs #712. Best score 208 bits
Score difference with first non-orthologous sequence - A.carolinensis:208 P.jiroveci:208

H9G3Y0              	100.00%		L0PFV3              	100.00%
Bootstrap support for H9G3Y0 as seed ortholog is 100%.
Bootstrap support for L0PFV3 as seed ortholog is 100%.

Group of orthologs #713. Best score 207 bits
Score difference with first non-orthologous sequence - A.carolinensis:207 P.jiroveci:207

G1KPU4              	100.00%		L0P9Q8              	100.00%
H9GNY5              	30.21%		
Bootstrap support for G1KPU4 as seed ortholog is 100%.
Bootstrap support for L0P9Q8 as seed ortholog is 100%.

Group of orthologs #714. Best score 206 bits
Score difference with first non-orthologous sequence - A.carolinensis:43 P.jiroveci:206

G1K9D4              	100.00%		L0PC02              	100.00%
H9GLN6              	41.06%		
Bootstrap support for G1K9D4 as seed ortholog is 85%.
Bootstrap support for L0PC02 as seed ortholog is 100%.

Group of orthologs #715. Best score 206 bits
Score difference with first non-orthologous sequence - A.carolinensis:99 P.jiroveci:206

G1KDE4              	100.00%		L0PE53              	100.00%
G1KST4              	36.23%		
Bootstrap support for G1KDE4 as seed ortholog is 96%.
Bootstrap support for L0PE53 as seed ortholog is 100%.

Group of orthologs #716. Best score 206 bits
Score difference with first non-orthologous sequence - A.carolinensis:206 P.jiroveci:206

G1KKI6              	100.00%		L0PBE8              	100.00%
Bootstrap support for G1KKI6 as seed ortholog is 100%.
Bootstrap support for L0PBE8 as seed ortholog is 100%.

Group of orthologs #717. Best score 206 bits
Score difference with first non-orthologous sequence - A.carolinensis:206 P.jiroveci:206

G1KKR3              	100.00%		L0PE89              	100.00%
Bootstrap support for G1KKR3 as seed ortholog is 100%.
Bootstrap support for L0PE89 as seed ortholog is 100%.

Group of orthologs #718. Best score 206 bits
Score difference with first non-orthologous sequence - A.carolinensis:206 P.jiroveci:206

H9GUL0              	100.00%		L0P9G9              	100.00%
Bootstrap support for H9GUL0 as seed ortholog is 100%.
Bootstrap support for L0P9G9 as seed ortholog is 100%.

Group of orthologs #719. Best score 205 bits
Score difference with first non-orthologous sequence - A.carolinensis:205 P.jiroveci:205

H9GFN5              	100.00%		L0PDR1              	100.00%
Bootstrap support for H9GFN5 as seed ortholog is 100%.
Bootstrap support for L0PDR1 as seed ortholog is 100%.

Group of orthologs #720. Best score 205 bits
Score difference with first non-orthologous sequence - A.carolinensis:105 P.jiroveci:205

H9GVU7              	100.00%		L0PCQ6              	100.00%
Bootstrap support for H9GVU7 as seed ortholog is 99%.
Bootstrap support for L0PCQ6 as seed ortholog is 100%.

Group of orthologs #721. Best score 204 bits
Score difference with first non-orthologous sequence - A.carolinensis:204 P.jiroveci:204

G1KQ03              	100.00%		L0P804              	100.00%
H9GN99              	67.56%		
Bootstrap support for G1KQ03 as seed ortholog is 100%.
Bootstrap support for L0P804 as seed ortholog is 100%.

Group of orthologs #722. Best score 204 bits
Score difference with first non-orthologous sequence - A.carolinensis:204 P.jiroveci:204

G1KBJ5              	100.00%		L0P910              	100.00%
Bootstrap support for G1KBJ5 as seed ortholog is 100%.
Bootstrap support for L0P910 as seed ortholog is 100%.

Group of orthologs #723. Best score 204 bits
Score difference with first non-orthologous sequence - A.carolinensis:204 P.jiroveci:204

G1KTY7              	100.00%		L0PC18              	100.00%
Bootstrap support for G1KTY7 as seed ortholog is 100%.
Bootstrap support for L0PC18 as seed ortholog is 100%.

Group of orthologs #724. Best score 203 bits
Score difference with first non-orthologous sequence - A.carolinensis:103 P.jiroveci:151

G1KAU9              	100.00%		L0P7B1              	100.00%
H9GUD0              	64.86%		
Bootstrap support for G1KAU9 as seed ortholog is 99%.
Bootstrap support for L0P7B1 as seed ortholog is 100%.

Group of orthologs #725. Best score 203 bits
Score difference with first non-orthologous sequence - A.carolinensis:203 P.jiroveci:203

G1KBJ4              	100.00%		L0PAC1              	100.00%
Bootstrap support for G1KBJ4 as seed ortholog is 100%.
Bootstrap support for L0PAC1 as seed ortholog is 100%.

Group of orthologs #726. Best score 203 bits
Score difference with first non-orthologous sequence - A.carolinensis:203 P.jiroveci:203

H9GCP7              	100.00%		L0PFN0              	100.00%
Bootstrap support for H9GCP7 as seed ortholog is 100%.
Bootstrap support for L0PFN0 as seed ortholog is 100%.

Group of orthologs #727. Best score 202 bits
Score difference with first non-orthologous sequence - A.carolinensis:202 P.jiroveci:202

G1KIS2              	100.00%		L0PH33              	100.00%
G1KJA9              	54.26%		
H9G853              	46.67%		
H9GFW3              	18.33%		
H9G425              	17.84%		
G1KU13              	16.91%		
H9GKS9              	16.42%		
H9GI85              	16.05%		
Bootstrap support for G1KIS2 as seed ortholog is 100%.
Bootstrap support for L0PH33 as seed ortholog is 100%.

Group of orthologs #728. Best score 202 bits
Score difference with first non-orthologous sequence - A.carolinensis:202 P.jiroveci:202

G1KT98              	100.00%		L0P7L9              	100.00%
Bootstrap support for G1KT98 as seed ortholog is 100%.
Bootstrap support for L0P7L9 as seed ortholog is 100%.

Group of orthologs #729. Best score 202 bits
Score difference with first non-orthologous sequence - A.carolinensis:202 P.jiroveci:202

H9GAJ4              	100.00%		L0PCB3              	100.00%
Bootstrap support for H9GAJ4 as seed ortholog is 100%.
Bootstrap support for L0PCB3 as seed ortholog is 100%.

Group of orthologs #730. Best score 202 bits
Score difference with first non-orthologous sequence - A.carolinensis:202 P.jiroveci:202

H9GJB6              	100.00%		L0PD35              	100.00%
Bootstrap support for H9GJB6 as seed ortholog is 100%.
Bootstrap support for L0PD35 as seed ortholog is 100%.

Group of orthologs #731. Best score 201 bits
Score difference with first non-orthologous sequence - A.carolinensis:71 P.jiroveci:201

G1KCU5              	100.00%		L0PEI5              	100.00%
H9G9U0              	35.14%		
Bootstrap support for G1KCU5 as seed ortholog is 99%.
Bootstrap support for L0PEI5 as seed ortholog is 100%.

Group of orthologs #732. Best score 201 bits
Score difference with first non-orthologous sequence - A.carolinensis:201 P.jiroveci:201

H9GJJ2              	100.00%		L0PBN7              	100.00%
G1KP89              	6.21%		
Bootstrap support for H9GJJ2 as seed ortholog is 100%.
Bootstrap support for L0PBN7 as seed ortholog is 100%.

Group of orthologs #733. Best score 201 bits
Score difference with first non-orthologous sequence - A.carolinensis:201 P.jiroveci:201

G1K8X2              	100.00%		L0PH54              	100.00%
Bootstrap support for G1K8X2 as seed ortholog is 100%.
Bootstrap support for L0PH54 as seed ortholog is 100%.

Group of orthologs #734. Best score 201 bits
Score difference with first non-orthologous sequence - A.carolinensis:201 P.jiroveci:201

G1KND4              	100.00%		L0PB31              	100.00%
Bootstrap support for G1KND4 as seed ortholog is 100%.
Bootstrap support for L0PB31 as seed ortholog is 100%.

Group of orthologs #735. Best score 201 bits
Score difference with first non-orthologous sequence - A.carolinensis:201 P.jiroveci:201

G1KNB5              	100.00%		L0PET6              	100.00%
Bootstrap support for G1KNB5 as seed ortholog is 100%.
Bootstrap support for L0PET6 as seed ortholog is 100%.

Group of orthologs #736. Best score 201 bits
Score difference with first non-orthologous sequence - A.carolinensis:201 P.jiroveci:201

H9GP68              	100.00%		L0P9Y2              	100.00%
Bootstrap support for H9GP68 as seed ortholog is 100%.
Bootstrap support for L0P9Y2 as seed ortholog is 100%.

Group of orthologs #737. Best score 200 bits
Score difference with first non-orthologous sequence - A.carolinensis:200 P.jiroveci:200

G1K918              	100.00%		L0PDJ6              	100.00%
H9GIY2              	37.79%		
G1KSN8              	14.29%		
Bootstrap support for G1K918 as seed ortholog is 100%.
Bootstrap support for L0PDJ6 as seed ortholog is 100%.

Group of orthologs #738. Best score 200 bits
Score difference with first non-orthologous sequence - A.carolinensis:95 P.jiroveci:67

H9G8P3              	100.00%		L0PDS3              	100.00%
G1KML2              	60.00%		
Bootstrap support for H9G8P3 as seed ortholog is 99%.
Bootstrap support for L0PDS3 as seed ortholog is 96%.

Group of orthologs #739. Best score 200 bits
Score difference with first non-orthologous sequence - A.carolinensis:113 P.jiroveci:200

G1KEP6              	100.00%		L0PF75              	100.00%
Bootstrap support for G1KEP6 as seed ortholog is 99%.
Bootstrap support for L0PF75 as seed ortholog is 100%.

Group of orthologs #740. Best score 199 bits
Score difference with first non-orthologous sequence - A.carolinensis:199 P.jiroveci:199

G1KIM5              	100.00%		L0PB94              	100.00%
G1K8G1              	38.73%		
H9GHT4              	35.08%		
Bootstrap support for G1KIM5 as seed ortholog is 100%.
Bootstrap support for L0PB94 as seed ortholog is 100%.

Group of orthologs #741. Best score 198 bits
Score difference with first non-orthologous sequence - A.carolinensis:198 P.jiroveci:198

G1KHH2              	100.00%		L0PBL3              	100.00%
G1KAR9              	59.65%		
G1KN00              	46.85%		
Bootstrap support for G1KHH2 as seed ortholog is 100%.
Bootstrap support for L0PBL3 as seed ortholog is 100%.

Group of orthologs #742. Best score 198 bits
Score difference with first non-orthologous sequence - A.carolinensis:198 P.jiroveci:198

H9GHA8              	100.00%		L0PB66              	100.00%
H9GDQ7              	61.90%		
Bootstrap support for H9GHA8 as seed ortholog is 100%.
Bootstrap support for L0PB66 as seed ortholog is 100%.

Group of orthologs #743. Best score 198 bits
Score difference with first non-orthologous sequence - A.carolinensis:198 P.jiroveci:198

G1KCP0              	100.00%		L0P8C9              	100.00%
Bootstrap support for G1KCP0 as seed ortholog is 100%.
Bootstrap support for L0P8C9 as seed ortholog is 100%.

Group of orthologs #744. Best score 198 bits
Score difference with first non-orthologous sequence - A.carolinensis:198 P.jiroveci:198

G1KTG6              	100.00%		L0P8P0              	100.00%
Bootstrap support for G1KTG6 as seed ortholog is 100%.
Bootstrap support for L0P8P0 as seed ortholog is 100%.

Group of orthologs #745. Best score 198 bits
Score difference with first non-orthologous sequence - A.carolinensis:124 P.jiroveci:198

G1KL72              	100.00%		L0PGD9              	100.00%
Bootstrap support for G1KL72 as seed ortholog is 99%.
Bootstrap support for L0PGD9 as seed ortholog is 100%.

Group of orthologs #746. Best score 198 bits
Score difference with first non-orthologous sequence - A.carolinensis:198 P.jiroveci:198

G1KTQ7              	100.00%		L0PCK9              	100.00%
Bootstrap support for G1KTQ7 as seed ortholog is 100%.
Bootstrap support for L0PCK9 as seed ortholog is 100%.

Group of orthologs #747. Best score 197 bits
Score difference with first non-orthologous sequence - A.carolinensis:197 P.jiroveci:197

H9G6Z6              	100.00%		L0P9I0              	100.00%
Bootstrap support for H9G6Z6 as seed ortholog is 100%.
Bootstrap support for L0P9I0 as seed ortholog is 100%.

Group of orthologs #748. Best score 197 bits
Score difference with first non-orthologous sequence - A.carolinensis:95 P.jiroveci:125

H9GGQ5              	100.00%		L0PA51              	100.00%
Bootstrap support for H9GGQ5 as seed ortholog is 99%.
Bootstrap support for L0PA51 as seed ortholog is 100%.

Group of orthologs #749. Best score 196 bits
Score difference with first non-orthologous sequence - A.carolinensis:196 P.jiroveci:196

G1KMQ3              	100.00%		L0PBC7              	100.00%
Bootstrap support for G1KMQ3 as seed ortholog is 100%.
Bootstrap support for L0PBC7 as seed ortholog is 100%.

Group of orthologs #750. Best score 196 bits
Score difference with first non-orthologous sequence - A.carolinensis:196 P.jiroveci:196

H9GFV7              	100.00%		L0PFS1              	100.00%
Bootstrap support for H9GFV7 as seed ortholog is 100%.
Bootstrap support for L0PFS1 as seed ortholog is 100%.

Group of orthologs #751. Best score 195 bits
Score difference with first non-orthologous sequence - A.carolinensis:195 P.jiroveci:195

H9GD27              	100.00%		L0P9Z4              	100.00%
H9GE69              	47.37%		
Bootstrap support for H9GD27 as seed ortholog is 100%.
Bootstrap support for L0P9Z4 as seed ortholog is 100%.

Group of orthologs #752. Best score 195 bits
Score difference with first non-orthologous sequence - A.carolinensis:129 P.jiroveci:195

H9GC37              	100.00%		L0PD33              	100.00%
H9G7P7              	54.99%		
Bootstrap support for H9GC37 as seed ortholog is 99%.
Bootstrap support for L0PD33 as seed ortholog is 100%.

Group of orthologs #753. Best score 195 bits
Score difference with first non-orthologous sequence - A.carolinensis:95 P.jiroveci:195

H9GIL6              	100.00%		L0PE03              	100.00%
Bootstrap support for H9GIL6 as seed ortholog is 99%.
Bootstrap support for L0PE03 as seed ortholog is 100%.

Group of orthologs #754. Best score 194 bits
Score difference with first non-orthologous sequence - A.carolinensis:47 P.jiroveci:194

G1KSX7              	100.00%		L0PEN4              	100.00%
H9GG97              	21.56%		
Bootstrap support for G1KSX7 as seed ortholog is 83%.
Bootstrap support for L0PEN4 as seed ortholog is 100%.

Group of orthologs #755. Best score 194 bits
Score difference with first non-orthologous sequence - A.carolinensis:194 P.jiroveci:126

H9G4B5              	100.00%		L0PCH8              	100.00%
Bootstrap support for H9G4B5 as seed ortholog is 100%.
Bootstrap support for L0PCH8 as seed ortholog is 99%.

Group of orthologs #756. Best score 194 bits
Score difference with first non-orthologous sequence - A.carolinensis:194 P.jiroveci:194

H9G891              	100.00%		L0PD68              	100.00%
Bootstrap support for H9G891 as seed ortholog is 100%.
Bootstrap support for L0PD68 as seed ortholog is 100%.

Group of orthologs #757. Best score 194 bits
Score difference with first non-orthologous sequence - A.carolinensis:102 P.jiroveci:128

H9GN03              	100.00%		L0P863              	100.00%
Bootstrap support for H9GN03 as seed ortholog is 99%.
Bootstrap support for L0P863 as seed ortholog is 99%.

Group of orthologs #758. Best score 193 bits
Score difference with first non-orthologous sequence - A.carolinensis:41 P.jiroveci:96

G1KL93              	100.00%		L0PAY4              	100.00%
G1KL94              	100.00%		
G1KZA1              	100.00%		
H9GM46              	58.67%		
L7N021              	54.67%		
H9G7D4              	53.33%		
L7MTM8              	53.33%		
L7MTL8              	52.00%		
Bootstrap support for G1KL93 as seed ortholog is 98%.
Bootstrap support for G1KL94 as seed ortholog is 98%.
Bootstrap support for G1KZA1 as seed ortholog is 98%.
Bootstrap support for L0PAY4 as seed ortholog is 100%.

Group of orthologs #759. Best score 193 bits
Score difference with first non-orthologous sequence - A.carolinensis:62 P.jiroveci:137

H9GA56              	100.00%		L0PCC3              	100.00%
G1K852              	76.07%		
G1KUL1              	73.08%		
Bootstrap support for H9GA56 as seed ortholog is 98%.
Bootstrap support for L0PCC3 as seed ortholog is 100%.

Group of orthologs #760. Best score 193 bits
Score difference with first non-orthologous sequence - A.carolinensis:193 P.jiroveci:193

H9G8L7              	100.00%		L0PBL8              	100.00%
                    	       		L0PDU3              	68.27%
Bootstrap support for H9G8L7 as seed ortholog is 100%.
Bootstrap support for L0PBL8 as seed ortholog is 100%.

Group of orthologs #761. Best score 193 bits
Score difference with first non-orthologous sequence - A.carolinensis:193 P.jiroveci:193

G1KB17              	100.00%		L0PE85              	100.00%
Bootstrap support for G1KB17 as seed ortholog is 100%.
Bootstrap support for L0PE85 as seed ortholog is 100%.

Group of orthologs #762. Best score 192 bits
Score difference with first non-orthologous sequence - A.carolinensis:63 P.jiroveci:141

G1KNK0              	100.00%		L0PEJ9              	100.00%
Bootstrap support for G1KNK0 as seed ortholog is 92%.
Bootstrap support for L0PEJ9 as seed ortholog is 99%.

Group of orthologs #763. Best score 192 bits
Score difference with first non-orthologous sequence - A.carolinensis:103 P.jiroveci:192

G1KTR6              	100.00%		L0PGG0              	100.00%
Bootstrap support for G1KTR6 as seed ortholog is 99%.
Bootstrap support for L0PGG0 as seed ortholog is 100%.

Group of orthologs #764. Best score 192 bits
Score difference with first non-orthologous sequence - A.carolinensis:192 P.jiroveci:192

H9G4A3              	100.00%		L0PFH7              	100.00%
Bootstrap support for H9G4A3 as seed ortholog is 100%.
Bootstrap support for L0PFH7 as seed ortholog is 100%.

Group of orthologs #765. Best score 192 bits
Score difference with first non-orthologous sequence - A.carolinensis:192 P.jiroveci:192

H9GNI8              	100.00%		L0PAJ6              	100.00%
Bootstrap support for H9GNI8 as seed ortholog is 100%.
Bootstrap support for L0PAJ6 as seed ortholog is 100%.

Group of orthologs #766. Best score 192 bits
Score difference with first non-orthologous sequence - A.carolinensis:192 P.jiroveci:192

H9GJY1              	100.00%		L0PGR5              	100.00%
Bootstrap support for H9GJY1 as seed ortholog is 100%.
Bootstrap support for L0PGR5 as seed ortholog is 100%.

Group of orthologs #767. Best score 191 bits
Score difference with first non-orthologous sequence - A.carolinensis:142 P.jiroveci:191

G1KMQ7              	100.00%		L0PEH9              	100.00%
Bootstrap support for G1KMQ7 as seed ortholog is 100%.
Bootstrap support for L0PEH9 as seed ortholog is 100%.

Group of orthologs #768. Best score 191 bits
Score difference with first non-orthologous sequence - A.carolinensis:191 P.jiroveci:54

G1KU31              	100.00%		L0PGX9              	100.00%
Bootstrap support for G1KU31 as seed ortholog is 100%.
Bootstrap support for L0PGX9 as seed ortholog is 92%.

Group of orthologs #769. Best score 191 bits
Score difference with first non-orthologous sequence - A.carolinensis:55 P.jiroveci:191

H9G778              	100.00%		L0PBS7              	100.00%
Bootstrap support for H9G778 as seed ortholog is 90%.
Bootstrap support for L0PBS7 as seed ortholog is 100%.

Group of orthologs #770. Best score 190 bits
Score difference with first non-orthologous sequence - A.carolinensis:190 P.jiroveci:190

H9GN04              	100.00%		L0PEB9              	100.00%
                    	       		L0PA79              	57.08%
Bootstrap support for H9GN04 as seed ortholog is 100%.
Bootstrap support for L0PEB9 as seed ortholog is 100%.

Group of orthologs #771. Best score 190 bits
Score difference with first non-orthologous sequence - A.carolinensis:190 P.jiroveci:190

G1KAS0              	100.00%		L0PCV5              	100.00%
Bootstrap support for G1KAS0 as seed ortholog is 100%.
Bootstrap support for L0PCV5 as seed ortholog is 100%.

Group of orthologs #772. Best score 190 bits
Score difference with first non-orthologous sequence - A.carolinensis:190 P.jiroveci:190

G1KEV0              	100.00%		L0PEK7              	100.00%
Bootstrap support for G1KEV0 as seed ortholog is 100%.
Bootstrap support for L0PEK7 as seed ortholog is 100%.

Group of orthologs #773. Best score 189 bits
Score difference with first non-orthologous sequence - A.carolinensis:189 P.jiroveci:189

G1KQX9              	100.00%		L0PC50              	100.00%
Bootstrap support for G1KQX9 as seed ortholog is 100%.
Bootstrap support for L0PC50 as seed ortholog is 100%.

Group of orthologs #774. Best score 189 bits
Score difference with first non-orthologous sequence - A.carolinensis:189 P.jiroveci:189

G1KTP6              	100.00%		L0PCJ8              	100.00%
Bootstrap support for G1KTP6 as seed ortholog is 100%.
Bootstrap support for L0PCJ8 as seed ortholog is 100%.

Group of orthologs #775. Best score 189 bits
Score difference with first non-orthologous sequence - A.carolinensis:87 P.jiroveci:189

H9GLY8              	100.00%		L0PDE4              	100.00%
Bootstrap support for H9GLY8 as seed ortholog is 99%.
Bootstrap support for L0PDE4 as seed ortholog is 100%.

Group of orthologs #776. Best score 188 bits
Score difference with first non-orthologous sequence - A.carolinensis:188 P.jiroveci:188

G1KL92              	100.00%		L0P859              	100.00%
                    	       		L0P7K4              	98.43%
Bootstrap support for G1KL92 as seed ortholog is 100%.
Bootstrap support for L0P859 as seed ortholog is 100%.

Group of orthologs #777. Best score 188 bits
Score difference with first non-orthologous sequence - A.carolinensis:39 P.jiroveci:188

G1K958              	100.00%		L0PCY2              	100.00%
Bootstrap support for G1K958 as seed ortholog is 80%.
Bootstrap support for L0PCY2 as seed ortholog is 100%.

Group of orthologs #778. Best score 188 bits
Score difference with first non-orthologous sequence - A.carolinensis:188 P.jiroveci:188

H9G6I7              	100.00%		L0PAM3              	100.00%
Bootstrap support for H9G6I7 as seed ortholog is 100%.
Bootstrap support for L0PAM3 as seed ortholog is 100%.

Group of orthologs #779. Best score 188 bits
Score difference with first non-orthologous sequence - A.carolinensis:188 P.jiroveci:188

H9G596              	100.00%		L0PDS6              	100.00%
Bootstrap support for H9G596 as seed ortholog is 100%.
Bootstrap support for L0PDS6 as seed ortholog is 100%.

Group of orthologs #780. Best score 188 bits
Score difference with first non-orthologous sequence - A.carolinensis:188 P.jiroveci:188

H9G898              	100.00%		L0PFH3              	100.00%
Bootstrap support for H9G898 as seed ortholog is 100%.
Bootstrap support for L0PFH3 as seed ortholog is 100%.

Group of orthologs #781. Best score 188 bits
Score difference with first non-orthologous sequence - A.carolinensis:188 P.jiroveci:188

H9GSX2              	100.00%		L0PGT2              	100.00%
Bootstrap support for H9GSX2 as seed ortholog is 100%.
Bootstrap support for L0PGT2 as seed ortholog is 100%.

Group of orthologs #782. Best score 187 bits
Score difference with first non-orthologous sequence - A.carolinensis:187 P.jiroveci:187

H9GNX3              	100.00%		L0PC96              	100.00%
Bootstrap support for H9GNX3 as seed ortholog is 100%.
Bootstrap support for L0PC96 as seed ortholog is 100%.

Group of orthologs #783. Best score 186 bits
Score difference with first non-orthologous sequence - A.carolinensis:186 P.jiroveci:186

G1K952              	100.00%		L0PCE0              	100.00%
G1KF86              	29.28%		
Bootstrap support for G1K952 as seed ortholog is 100%.
Bootstrap support for L0PCE0 as seed ortholog is 100%.

Group of orthologs #784. Best score 186 bits
Score difference with first non-orthologous sequence - A.carolinensis:186 P.jiroveci:186

G1KED9              	100.00%		L0PGW6              	100.00%
G1K8Y0              	21.79%		
Bootstrap support for G1KED9 as seed ortholog is 100%.
Bootstrap support for L0PGW6 as seed ortholog is 100%.

Group of orthologs #785. Best score 186 bits
Score difference with first non-orthologous sequence - A.carolinensis:186 P.jiroveci:186

G1KC79              	100.00%		L0P8C3              	100.00%
Bootstrap support for G1KC79 as seed ortholog is 100%.
Bootstrap support for L0P8C3 as seed ortholog is 100%.

Group of orthologs #786. Best score 186 bits
Score difference with first non-orthologous sequence - A.carolinensis:186 P.jiroveci:186

G1K8V0              	100.00%		L0PFD7              	100.00%
Bootstrap support for G1K8V0 as seed ortholog is 100%.
Bootstrap support for L0PFD7 as seed ortholog is 100%.

Group of orthologs #787. Best score 185 bits
Score difference with first non-orthologous sequence - A.carolinensis:51 P.jiroveci:185

G1KTG1              	100.00%		L0PAP9              	100.00%
G1KCY8              	44.19%		
Bootstrap support for G1KTG1 as seed ortholog is 99%.
Bootstrap support for L0PAP9 as seed ortholog is 100%.

Group of orthologs #788. Best score 185 bits
Score difference with first non-orthologous sequence - A.carolinensis:185 P.jiroveci:66

G1KTF5              	100.00%		L0PFQ4              	100.00%
Bootstrap support for G1KTF5 as seed ortholog is 100%.
Bootstrap support for L0PFQ4 as seed ortholog is 99%.

Group of orthologs #789. Best score 185 bits
Score difference with first non-orthologous sequence - A.carolinensis:185 P.jiroveci:185

H9G4H7              	100.00%		L0PA07              	100.00%
Bootstrap support for H9G4H7 as seed ortholog is 100%.
Bootstrap support for L0PA07 as seed ortholog is 100%.

Group of orthologs #790. Best score 185 bits
Score difference with first non-orthologous sequence - A.carolinensis:185 P.jiroveci:185

H9GB37              	100.00%		L0P784              	100.00%
Bootstrap support for H9GB37 as seed ortholog is 100%.
Bootstrap support for L0P784 as seed ortholog is 100%.

Group of orthologs #791. Best score 185 bits
Score difference with first non-orthologous sequence - A.carolinensis:185 P.jiroveci:185

H9GIB8              	100.00%		L0PC80              	100.00%
Bootstrap support for H9GIB8 as seed ortholog is 100%.
Bootstrap support for L0PC80 as seed ortholog is 100%.

Group of orthologs #792. Best score 185 bits
Score difference with first non-orthologous sequence - A.carolinensis:185 P.jiroveci:185

H9GJF7              	100.00%		L0PGJ6              	100.00%
Bootstrap support for H9GJF7 as seed ortholog is 100%.
Bootstrap support for L0PGJ6 as seed ortholog is 100%.

Group of orthologs #793. Best score 184 bits
Score difference with first non-orthologous sequence - A.carolinensis:184 P.jiroveci:184

G1KBT5              	100.00%		L0PB62              	100.00%
Bootstrap support for G1KBT5 as seed ortholog is 100%.
Bootstrap support for L0PB62 as seed ortholog is 100%.

Group of orthologs #794. Best score 183 bits
Score difference with first non-orthologous sequence - A.carolinensis:183 P.jiroveci:183

G1KRA1              	100.00%		L0PC06              	100.00%
Bootstrap support for G1KRA1 as seed ortholog is 100%.
Bootstrap support for L0PC06 as seed ortholog is 100%.

Group of orthologs #795. Best score 183 bits
Score difference with first non-orthologous sequence - A.carolinensis:183 P.jiroveci:183

H9GG94              	100.00%		L0PE97              	100.00%
Bootstrap support for H9GG94 as seed ortholog is 100%.
Bootstrap support for L0PE97 as seed ortholog is 100%.

Group of orthologs #796. Best score 182 bits
Score difference with first non-orthologous sequence - A.carolinensis:124 P.jiroveci:182

H9GEE7              	100.00%		L0PBU7              	100.00%
Bootstrap support for H9GEE7 as seed ortholog is 100%.
Bootstrap support for L0PBU7 as seed ortholog is 100%.

Group of orthologs #797. Best score 181 bits
Score difference with first non-orthologous sequence - A.carolinensis:181 P.jiroveci:181

H9GGF4              	100.00%		L0PHT7              	100.00%
G1KDI3              	19.39%		
Bootstrap support for H9GGF4 as seed ortholog is 100%.
Bootstrap support for L0PHT7 as seed ortholog is 100%.

Group of orthologs #798. Best score 180 bits
Score difference with first non-orthologous sequence - A.carolinensis:180 P.jiroveci:180

G1KL91              	100.00%		L0PCF8              	100.00%
G1KFL5              	58.78%		
Bootstrap support for G1KL91 as seed ortholog is 100%.
Bootstrap support for L0PCF8 as seed ortholog is 100%.

Group of orthologs #799. Best score 180 bits
Score difference with first non-orthologous sequence - A.carolinensis:180 P.jiroveci:180

H9GKJ0              	100.00%		L0PA28              	100.00%
G1K8M1              	28.65%		
Bootstrap support for H9GKJ0 as seed ortholog is 100%.
Bootstrap support for L0PA28 as seed ortholog is 100%.

Group of orthologs #800. Best score 180 bits
Score difference with first non-orthologous sequence - A.carolinensis:180 P.jiroveci:180

G1KJY5              	100.00%		L0P780              	100.00%
Bootstrap support for G1KJY5 as seed ortholog is 100%.
Bootstrap support for L0P780 as seed ortholog is 100%.

Group of orthologs #801. Best score 179 bits
Score difference with first non-orthologous sequence - A.carolinensis:179 P.jiroveci:179

G1KC81              	100.00%		L0P8V3              	100.00%
Bootstrap support for G1KC81 as seed ortholog is 100%.
Bootstrap support for L0P8V3 as seed ortholog is 100%.

Group of orthologs #802. Best score 179 bits
Score difference with first non-orthologous sequence - A.carolinensis:100 P.jiroveci:84

H9GAT7              	100.00%		L0P7L3              	100.00%
Bootstrap support for H9GAT7 as seed ortholog is 99%.
Bootstrap support for L0P7L3 as seed ortholog is 99%.

Group of orthologs #803. Best score 179 bits
Score difference with first non-orthologous sequence - A.carolinensis:106 P.jiroveci:179

H9GB33              	100.00%		L0P838              	100.00%
Bootstrap support for H9GB33 as seed ortholog is 99%.
Bootstrap support for L0P838 as seed ortholog is 100%.

Group of orthologs #804. Best score 178 bits
Score difference with first non-orthologous sequence - A.carolinensis:26 P.jiroveci:92

G1KCB5              	100.00%		L0PGM0              	100.00%
G1KEF1              	56.93%		
H9GIW0              	48.02%		
Bootstrap support for G1KCB5 as seed ortholog is 88%.
Bootstrap support for L0PGM0 as seed ortholog is 99%.

Group of orthologs #805. Best score 178 bits
Score difference with first non-orthologous sequence - A.carolinensis:93 P.jiroveci:178

G1KPZ4              	100.00%		L0PFZ6              	100.00%
                    	       		L0P7L2              	96.09%
Bootstrap support for G1KPZ4 as seed ortholog is 99%.
Bootstrap support for L0PFZ6 as seed ortholog is 100%.

Group of orthologs #806. Best score 178 bits
Score difference with first non-orthologous sequence - A.carolinensis:178 P.jiroveci:178

G1KJZ6              	100.00%		L0P740              	100.00%
Bootstrap support for G1KJZ6 as seed ortholog is 100%.
Bootstrap support for L0P740 as seed ortholog is 100%.

Group of orthologs #807. Best score 178 bits
Score difference with first non-orthologous sequence - A.carolinensis:178 P.jiroveci:178

G1KIQ1              	100.00%		L0PBI8              	100.00%
Bootstrap support for G1KIQ1 as seed ortholog is 100%.
Bootstrap support for L0PBI8 as seed ortholog is 100%.

Group of orthologs #808. Best score 177 bits
Score difference with first non-orthologous sequence - A.carolinensis:177 P.jiroveci:177

H9GGT4              	100.00%		L0PBJ0              	100.00%
Bootstrap support for H9GGT4 as seed ortholog is 100%.
Bootstrap support for L0PBJ0 as seed ortholog is 100%.

Group of orthologs #809. Best score 177 bits
Score difference with first non-orthologous sequence - A.carolinensis:177 P.jiroveci:177

H9GK35              	100.00%		L0PG23              	100.00%
Bootstrap support for H9GK35 as seed ortholog is 100%.
Bootstrap support for L0PG23 as seed ortholog is 100%.

Group of orthologs #810. Best score 177 bits
Score difference with first non-orthologous sequence - A.carolinensis:177 P.jiroveci:177

H9GP06              	100.00%		L0PGK0              	100.00%
Bootstrap support for H9GP06 as seed ortholog is 100%.
Bootstrap support for L0PGK0 as seed ortholog is 100%.

Group of orthologs #811. Best score 176 bits
Score difference with first non-orthologous sequence - A.carolinensis:80 P.jiroveci:176

H9GKX8              	100.00%		L0PBL1              	100.00%
H9GMN9              	32.85%		
H9GSZ4              	27.89%		
Bootstrap support for H9GKX8 as seed ortholog is 99%.
Bootstrap support for L0PBL1 as seed ortholog is 100%.

Group of orthologs #812. Best score 176 bits
Score difference with first non-orthologous sequence - A.carolinensis:176 P.jiroveci:176

G1KH08              	100.00%		L0PDL8              	100.00%
                    	       		L0PD52              	90.69%
Bootstrap support for G1KH08 as seed ortholog is 100%.
Bootstrap support for L0PDL8 as seed ortholog is 100%.

Group of orthologs #813. Best score 176 bits
Score difference with first non-orthologous sequence - A.carolinensis:176 P.jiroveci:176

G1KKB1              	100.00%		L0PFS4              	100.00%
H9G4C8              	73.43%		
Bootstrap support for G1KKB1 as seed ortholog is 100%.
Bootstrap support for L0PFS4 as seed ortholog is 100%.

Group of orthologs #814. Best score 176 bits
Score difference with first non-orthologous sequence - A.carolinensis:127 P.jiroveci:176

H9GB28              	100.00%		L0PFW7              	100.00%
H9GJS6              	9.72%		
Bootstrap support for H9GB28 as seed ortholog is 100%.
Bootstrap support for L0PFW7 as seed ortholog is 100%.

Group of orthologs #815. Best score 176 bits
Score difference with first non-orthologous sequence - A.carolinensis:176 P.jiroveci:176

G1KHD7              	100.00%		L0PB59              	100.00%
Bootstrap support for G1KHD7 as seed ortholog is 100%.
Bootstrap support for L0PB59 as seed ortholog is 100%.

Group of orthologs #816. Best score 176 bits
Score difference with first non-orthologous sequence - A.carolinensis:176 P.jiroveci:176

G1KEK4              	100.00%		L0PEA1              	100.00%
Bootstrap support for G1KEK4 as seed ortholog is 100%.
Bootstrap support for L0PEA1 as seed ortholog is 100%.

Group of orthologs #817. Best score 176 bits
Score difference with first non-orthologous sequence - A.carolinensis:51 P.jiroveci:176

G1KLX2              	100.00%		L0PC81              	100.00%
Bootstrap support for G1KLX2 as seed ortholog is 91%.
Bootstrap support for L0PC81 as seed ortholog is 100%.

Group of orthologs #818. Best score 176 bits
Score difference with first non-orthologous sequence - A.carolinensis:176 P.jiroveci:176

H9GKC3              	100.00%		L0P8D5              	100.00%
Bootstrap support for H9GKC3 as seed ortholog is 100%.
Bootstrap support for L0P8D5 as seed ortholog is 100%.

Group of orthologs #819. Best score 175 bits
Score difference with first non-orthologous sequence - A.carolinensis:101 P.jiroveci:175

H9GSM5              	100.00%		L0PET2              	100.00%
                    	       		L0PAE5              	87.95%
Bootstrap support for H9GSM5 as seed ortholog is 99%.
Bootstrap support for L0PET2 as seed ortholog is 100%.

Group of orthologs #820. Best score 175 bits
Score difference with first non-orthologous sequence - A.carolinensis:50 P.jiroveci:125

G1KMH7              	100.00%		L0PAS2              	100.00%
Bootstrap support for G1KMH7 as seed ortholog is 97%.
Bootstrap support for L0PAS2 as seed ortholog is 100%.

Group of orthologs #821. Best score 175 bits
Score difference with first non-orthologous sequence - A.carolinensis:122 P.jiroveci:175

H9GK96              	100.00%		L0PBL5              	100.00%
Bootstrap support for H9GK96 as seed ortholog is 99%.
Bootstrap support for L0PBL5 as seed ortholog is 100%.

Group of orthologs #822. Best score 174 bits
Score difference with first non-orthologous sequence - A.carolinensis:174 P.jiroveci:174

G1KHL1              	100.00%		L0PFG0              	100.00%
G1KUJ7              	75.85%		
H9G382              	21.26%		
G1KU75              	15.46%		
Bootstrap support for G1KHL1 as seed ortholog is 100%.
Bootstrap support for L0PFG0 as seed ortholog is 100%.

Group of orthologs #823. Best score 174 bits
Score difference with first non-orthologous sequence - A.carolinensis:174 P.jiroveci:174

H9G3B8              	100.00%		L0P8J4              	100.00%
H9G8I1              	58.74%		
Bootstrap support for H9G3B8 as seed ortholog is 100%.
Bootstrap support for L0P8J4 as seed ortholog is 100%.

Group of orthologs #824. Best score 174 bits
Score difference with first non-orthologous sequence - A.carolinensis:174 P.jiroveci:174

H9GUT1              	100.00%		L0PE09              	100.00%
H9GJM0              	15.22%		
Bootstrap support for H9GUT1 as seed ortholog is 100%.
Bootstrap support for L0PE09 as seed ortholog is 100%.

Group of orthologs #825. Best score 174 bits
Score difference with first non-orthologous sequence - A.carolinensis:66 P.jiroveci:174

G1KKZ7              	100.00%		L0PBX9              	100.00%
Bootstrap support for G1KKZ7 as seed ortholog is 89%.
Bootstrap support for L0PBX9 as seed ortholog is 100%.

Group of orthologs #826. Best score 174 bits
Score difference with first non-orthologous sequence - A.carolinensis:174 P.jiroveci:174

G1KPL2              	100.00%		L0PGZ5              	100.00%
Bootstrap support for G1KPL2 as seed ortholog is 100%.
Bootstrap support for L0PGZ5 as seed ortholog is 100%.

Group of orthologs #827. Best score 174 bits
Score difference with first non-orthologous sequence - A.carolinensis:174 P.jiroveci:174

H9G7K1              	100.00%		L0PG54              	100.00%
Bootstrap support for H9G7K1 as seed ortholog is 100%.
Bootstrap support for L0PG54 as seed ortholog is 100%.

Group of orthologs #828. Best score 174 bits
Score difference with first non-orthologous sequence - A.carolinensis:18 P.jiroveci:55

H9G9G4              	100.00%		L0PG51              	100.00%
Bootstrap support for H9G9G4 as seed ortholog is 78%.
Bootstrap support for L0PG51 as seed ortholog is 90%.

Group of orthologs #829. Best score 173 bits
Score difference with first non-orthologous sequence - A.carolinensis:173 P.jiroveci:173

H9G4J8              	100.00%		L0PB81              	100.00%
G1KXR4              	87.50%		
Bootstrap support for H9G4J8 as seed ortholog is 100%.
Bootstrap support for L0PB81 as seed ortholog is 100%.

Group of orthologs #830. Best score 173 bits
Score difference with first non-orthologous sequence - A.carolinensis:173 P.jiroveci:173

H9GDF7              	100.00%		L0PFK7              	100.00%
G1KVX1              	71.89%		
Bootstrap support for H9GDF7 as seed ortholog is 100%.
Bootstrap support for L0PFK7 as seed ortholog is 100%.

Group of orthologs #831. Best score 173 bits
Score difference with first non-orthologous sequence - A.carolinensis:42 P.jiroveci:173

H9GL40              	100.00%		L0P8Q5              	100.00%
Bootstrap support for H9GL40 as seed ortholog is 83%.
Bootstrap support for L0P8Q5 as seed ortholog is 100%.

Group of orthologs #832. Best score 173 bits
Score difference with first non-orthologous sequence - A.carolinensis:173 P.jiroveci:173

H9GP61              	100.00%		L0PHR2              	100.00%
Bootstrap support for H9GP61 as seed ortholog is 100%.
Bootstrap support for L0PHR2 as seed ortholog is 100%.

Group of orthologs #833. Best score 172 bits
Score difference with first non-orthologous sequence - A.carolinensis:100 P.jiroveci:172

G1KBI8              	100.00%		L0PBU8              	100.00%
Bootstrap support for G1KBI8 as seed ortholog is 78%.
Bootstrap support for L0PBU8 as seed ortholog is 100%.

Group of orthologs #834. Best score 172 bits
Score difference with first non-orthologous sequence - A.carolinensis:172 P.jiroveci:172

G1KU91              	100.00%		L0PB17              	100.00%
Bootstrap support for G1KU91 as seed ortholog is 100%.
Bootstrap support for L0PB17 as seed ortholog is 100%.

Group of orthologs #835. Best score 172 bits
Score difference with first non-orthologous sequence - A.carolinensis:172 P.jiroveci:172

H9G8G7              	100.00%		L0PEL2              	100.00%
Bootstrap support for H9G8G7 as seed ortholog is 100%.
Bootstrap support for L0PEL2 as seed ortholog is 100%.

Group of orthologs #836. Best score 171 bits
Score difference with first non-orthologous sequence - A.carolinensis:171 P.jiroveci:171

H9GKB0              	100.00%		L0PC66              	100.00%
G1KG47              	27.53%		L0PBN8              	73.42%
Bootstrap support for H9GKB0 as seed ortholog is 100%.
Bootstrap support for L0PC66 as seed ortholog is 100%.

Group of orthologs #837. Best score 171 bits
Score difference with first non-orthologous sequence - A.carolinensis:171 P.jiroveci:124

H9GDA5              	100.00%		L0PE37              	100.00%
Bootstrap support for H9GDA5 as seed ortholog is 100%.
Bootstrap support for L0PE37 as seed ortholog is 99%.

Group of orthologs #838. Best score 170 bits
Score difference with first non-orthologous sequence - A.carolinensis:9 P.jiroveci:115

G1K9Y7              	100.00%		L0PIS9              	100.00%
H9G4C7              	66.53%		
H9G7V1              	14.23%		
G1KT46              	10.04%		
H9GGD7              	8.79%		
G1KNA1              	5.02%		
Bootstrap support for G1K9Y7 as seed ortholog is 60%.
Alternative seed ortholog is H9GK52 (9 bits away from this cluster)
Bootstrap support for L0PIS9 as seed ortholog is 99%.

Group of orthologs #839. Best score 170 bits
Score difference with first non-orthologous sequence - A.carolinensis:83 P.jiroveci:53

G1K9L3              	100.00%		L0PDC4              	100.00%
                    	       		L0PBK4              	11.04%
Bootstrap support for G1K9L3 as seed ortholog is 99%.
Bootstrap support for L0PDC4 as seed ortholog is 92%.

Group of orthologs #840. Best score 170 bits
Score difference with first non-orthologous sequence - A.carolinensis:170 P.jiroveci:170

G1KFZ4              	100.00%		L0PDA4              	100.00%
Bootstrap support for G1KFZ4 as seed ortholog is 100%.
Bootstrap support for L0PDA4 as seed ortholog is 100%.

Group of orthologs #841. Best score 170 bits
Score difference with first non-orthologous sequence - A.carolinensis:7 P.jiroveci:170

H9G7L0              	100.00%		L0PEX1              	100.00%
Bootstrap support for H9G7L0 as seed ortholog is 63%.
Alternative seed ortholog is G1KC24 (7 bits away from this cluster)
Bootstrap support for L0PEX1 as seed ortholog is 100%.

Group of orthologs #842. Best score 170 bits
Score difference with first non-orthologous sequence - A.carolinensis:170 P.jiroveci:170

H9GM24              	100.00%		L0PFC3              	100.00%
Bootstrap support for H9GM24 as seed ortholog is 100%.
Bootstrap support for L0PFC3 as seed ortholog is 100%.

Group of orthologs #843. Best score 169 bits
Score difference with first non-orthologous sequence - A.carolinensis:169 P.jiroveci:169

G1KTG4              	100.00%		L0PBX0              	100.00%
H9GJ54              	25.24%		
Bootstrap support for G1KTG4 as seed ortholog is 100%.
Bootstrap support for L0PBX0 as seed ortholog is 100%.

Group of orthologs #844. Best score 169 bits
Score difference with first non-orthologous sequence - A.carolinensis:118 P.jiroveci:169

G1KMR7              	100.00%		L0PD40              	100.00%
Bootstrap support for G1KMR7 as seed ortholog is 99%.
Bootstrap support for L0PD40 as seed ortholog is 100%.

Group of orthologs #845. Best score 169 bits
Score difference with first non-orthologous sequence - A.carolinensis:65 P.jiroveci:52

G1KSG7              	100.00%		L0PAQ4              	100.00%
Bootstrap support for G1KSG7 as seed ortholog is 96%.
Bootstrap support for L0PAQ4 as seed ortholog is 92%.

Group of orthologs #846. Best score 169 bits
Score difference with first non-orthologous sequence - A.carolinensis:53 P.jiroveci:169

H9G9X2              	100.00%		L0P9Z5              	100.00%
Bootstrap support for H9G9X2 as seed ortholog is 88%.
Bootstrap support for L0P9Z5 as seed ortholog is 100%.

Group of orthologs #847. Best score 169 bits
Score difference with first non-orthologous sequence - A.carolinensis:169 P.jiroveci:169

H9GIR8              	100.00%		L0P8D9              	100.00%
Bootstrap support for H9GIR8 as seed ortholog is 100%.
Bootstrap support for L0P8D9 as seed ortholog is 100%.

Group of orthologs #848. Best score 169 bits
Score difference with first non-orthologous sequence - A.carolinensis:110 P.jiroveci:169

H9GLX9              	100.00%		L0PC70              	100.00%
Bootstrap support for H9GLX9 as seed ortholog is 100%.
Bootstrap support for L0PC70 as seed ortholog is 100%.

Group of orthologs #849. Best score 169 bits
Score difference with first non-orthologous sequence - A.carolinensis:68 P.jiroveci:169

H9GK85              	100.00%		L0PEI1              	100.00%
Bootstrap support for H9GK85 as seed ortholog is 99%.
Bootstrap support for L0PEI1 as seed ortholog is 100%.

Group of orthologs #850. Best score 168 bits
Score difference with first non-orthologous sequence - A.carolinensis:104 P.jiroveci:168

G1K8M7              	100.00%		L0PD97              	100.00%
G1K8T2              	71.04%		
G1KN59              	6.13%		
Bootstrap support for G1K8M7 as seed ortholog is 99%.
Bootstrap support for L0PD97 as seed ortholog is 100%.

Group of orthologs #851. Best score 168 bits
Score difference with first non-orthologous sequence - A.carolinensis:92 P.jiroveci:168

G1KP37              	100.00%		L0PAG4              	100.00%
G1KMA3              	58.20%		
Bootstrap support for G1KP37 as seed ortholog is 99%.
Bootstrap support for L0PAG4 as seed ortholog is 100%.

Group of orthologs #852. Best score 168 bits
Score difference with first non-orthologous sequence - A.carolinensis:168 P.jiroveci:168

G1KPD7              	100.00%		L0PE43              	100.00%
Bootstrap support for G1KPD7 as seed ortholog is 100%.
Bootstrap support for L0PE43 as seed ortholog is 100%.

Group of orthologs #853. Best score 168 bits
Score difference with first non-orthologous sequence - A.carolinensis:168 P.jiroveci:168

H9GH05              	100.00%		L0PB82              	100.00%
Bootstrap support for H9GH05 as seed ortholog is 100%.
Bootstrap support for L0PB82 as seed ortholog is 100%.

Group of orthologs #854. Best score 168 bits
Score difference with first non-orthologous sequence - A.carolinensis:168 P.jiroveci:168

H9GFL5              	100.00%		L0PGP5              	100.00%
Bootstrap support for H9GFL5 as seed ortholog is 100%.
Bootstrap support for L0PGP5 as seed ortholog is 100%.

Group of orthologs #855. Best score 167 bits
Score difference with first non-orthologous sequence - A.carolinensis:6 P.jiroveci:127

G1KIX2              	100.00%		L0PFZ5              	100.00%
Bootstrap support for G1KIX2 as seed ortholog is 43%.
Alternative seed ortholog is H9GCV8 (6 bits away from this cluster)
Bootstrap support for L0PFZ5 as seed ortholog is 100%.

Group of orthologs #856. Best score 167 bits
Score difference with first non-orthologous sequence - A.carolinensis:167 P.jiroveci:167

G1KSP3              	100.00%		L0P7U2              	100.00%
Bootstrap support for G1KSP3 as seed ortholog is 100%.
Bootstrap support for L0P7U2 as seed ortholog is 100%.

Group of orthologs #857. Best score 167 bits
Score difference with first non-orthologous sequence - A.carolinensis:167 P.jiroveci:167

H9GF42              	100.00%		L0PCZ4              	100.00%
Bootstrap support for H9GF42 as seed ortholog is 100%.
Bootstrap support for L0PCZ4 as seed ortholog is 100%.

Group of orthologs #858. Best score 167 bits
Score difference with first non-orthologous sequence - A.carolinensis:167 P.jiroveci:167

H9GNK7              	100.00%		L0P9W6              	100.00%
Bootstrap support for H9GNK7 as seed ortholog is 100%.
Bootstrap support for L0P9W6 as seed ortholog is 100%.

Group of orthologs #859. Best score 166 bits
Score difference with first non-orthologous sequence - A.carolinensis:58 P.jiroveci:53

H9G8X2              	100.00%		L0PDB8              	100.00%
H9G5T9              	42.37%		
H9G6N5              	34.73%		
H9GC54              	16.41%		
H9G7H8              	8.40%		
Bootstrap support for H9G8X2 as seed ortholog is 95%.
Bootstrap support for L0PDB8 as seed ortholog is 96%.

Group of orthologs #860. Best score 166 bits
Score difference with first non-orthologous sequence - A.carolinensis:166 P.jiroveci:166

G1KCD0              	100.00%		L0PEA9              	100.00%
G1KRN1              	36.97%		
Bootstrap support for G1KCD0 as seed ortholog is 100%.
Bootstrap support for L0PEA9 as seed ortholog is 100%.

Group of orthologs #861. Best score 166 bits
Score difference with first non-orthologous sequence - A.carolinensis:166 P.jiroveci:166

G1KKW5              	100.00%		L0PAR2              	100.00%
Bootstrap support for G1KKW5 as seed ortholog is 100%.
Bootstrap support for L0PAR2 as seed ortholog is 100%.

Group of orthologs #862. Best score 166 bits
Score difference with first non-orthologous sequence - A.carolinensis:166 P.jiroveci:166

H9G7Y5              	100.00%		L0PC68              	100.00%
Bootstrap support for H9G7Y5 as seed ortholog is 100%.
Bootstrap support for L0PC68 as seed ortholog is 100%.

Group of orthologs #863. Best score 165 bits
Score difference with first non-orthologous sequence - A.carolinensis:165 P.jiroveci:165

G1K8L0              	100.00%		L0PFW9              	100.00%
H9GK03              	33.22%		
Bootstrap support for G1K8L0 as seed ortholog is 100%.
Bootstrap support for L0PFW9 as seed ortholog is 100%.

Group of orthologs #864. Best score 165 bits
Score difference with first non-orthologous sequence - A.carolinensis:84 P.jiroveci:95

G1KU17              	100.00%		L0PFK9              	100.00%
H9GFI4              	27.13%		
Bootstrap support for G1KU17 as seed ortholog is 98%.
Bootstrap support for L0PFK9 as seed ortholog is 99%.

Group of orthologs #865. Best score 165 bits
Score difference with first non-orthologous sequence - A.carolinensis:165 P.jiroveci:165

G1KDV3              	100.00%		L0PDP9              	100.00%
Bootstrap support for G1KDV3 as seed ortholog is 100%.
Bootstrap support for L0PDP9 as seed ortholog is 100%.

Group of orthologs #866. Best score 165 bits
Score difference with first non-orthologous sequence - A.carolinensis:50 P.jiroveci:120

G1KFF9              	100.00%		L0PDG6              	100.00%
Bootstrap support for G1KFF9 as seed ortholog is 91%.
Bootstrap support for L0PDG6 as seed ortholog is 99%.

Group of orthologs #867. Best score 164 bits
Score difference with first non-orthologous sequence - A.carolinensis:103 P.jiroveci:87

G1K8A4              	100.00%		L0PEX6              	100.00%
H9GMP8              	16.86%		
G1KLP1              	5.23%		
Bootstrap support for G1K8A4 as seed ortholog is 99%.
Bootstrap support for L0PEX6 as seed ortholog is 99%.

Group of orthologs #868. Best score 164 bits
Score difference with first non-orthologous sequence - A.carolinensis:164 P.jiroveci:164

G1KH96              	100.00%		L0PA27              	100.00%
G1KD62              	45.28%		
Bootstrap support for G1KH96 as seed ortholog is 100%.
Bootstrap support for L0PA27 as seed ortholog is 100%.

Group of orthologs #869. Best score 164 bits
Score difference with first non-orthologous sequence - A.carolinensis:164 P.jiroveci:164

G1K8P8              	100.00%		L0PE02              	100.00%
Bootstrap support for G1K8P8 as seed ortholog is 100%.
Bootstrap support for L0PE02 as seed ortholog is 100%.

Group of orthologs #870. Best score 164 bits
Score difference with first non-orthologous sequence - A.carolinensis:164 P.jiroveci:164

G1KD50              	100.00%		L0PEX0              	100.00%
Bootstrap support for G1KD50 as seed ortholog is 100%.
Bootstrap support for L0PEX0 as seed ortholog is 100%.

Group of orthologs #871. Best score 164 bits
Score difference with first non-orthologous sequence - A.carolinensis:164 P.jiroveci:164

G1KI51              	100.00%		L0PA78              	100.00%
Bootstrap support for G1KI51 as seed ortholog is 100%.
Bootstrap support for L0PA78 as seed ortholog is 100%.

Group of orthologs #872. Best score 163 bits
Score difference with first non-orthologous sequence - A.carolinensis:163 P.jiroveci:163

G1KAT5              	100.00%		L0PBL9              	100.00%
Bootstrap support for G1KAT5 as seed ortholog is 100%.
Bootstrap support for L0PBL9 as seed ortholog is 100%.

Group of orthologs #873. Best score 163 bits
Score difference with first non-orthologous sequence - A.carolinensis:163 P.jiroveci:163

H9GJ60              	100.00%		L0P9G6              	100.00%
Bootstrap support for H9GJ60 as seed ortholog is 100%.
Bootstrap support for L0P9G6 as seed ortholog is 100%.

Group of orthologs #874. Best score 163 bits
Score difference with first non-orthologous sequence - A.carolinensis:163 P.jiroveci:163

H9GMW4              	100.00%		L0P8P5              	100.00%
Bootstrap support for H9GMW4 as seed ortholog is 100%.
Bootstrap support for L0P8P5 as seed ortholog is 100%.

Group of orthologs #875. Best score 162 bits
Score difference with first non-orthologous sequence - A.carolinensis:162 P.jiroveci:162

H9GFS5              	100.00%		L0P8S1              	100.00%
H9GDP4              	44.44%		
H9GC17              	39.68%		
Bootstrap support for H9GFS5 as seed ortholog is 100%.
Bootstrap support for L0P8S1 as seed ortholog is 100%.

Group of orthologs #876. Best score 162 bits
Score difference with first non-orthologous sequence - A.carolinensis:162 P.jiroveci:162

G1KMS6              	100.00%		L0PF66              	100.00%
G1KKR0              	66.97%		
Bootstrap support for G1KMS6 as seed ortholog is 100%.
Bootstrap support for L0PF66 as seed ortholog is 100%.

Group of orthologs #877. Best score 162 bits
Score difference with first non-orthologous sequence - A.carolinensis:162 P.jiroveci:162

G1KD39              	100.00%		L0PF39              	100.00%
Bootstrap support for G1KD39 as seed ortholog is 100%.
Bootstrap support for L0PF39 as seed ortholog is 100%.

Group of orthologs #878. Best score 162 bits
Score difference with first non-orthologous sequence - A.carolinensis:162 P.jiroveci:162

G1KI76              	100.00%		L0PBK8              	100.00%
Bootstrap support for G1KI76 as seed ortholog is 100%.
Bootstrap support for L0PBK8 as seed ortholog is 100%.

Group of orthologs #879. Best score 162 bits
Score difference with first non-orthologous sequence - A.carolinensis:120 P.jiroveci:162

H9G4J3              	100.00%		L0P7Z9              	100.00%
Bootstrap support for H9G4J3 as seed ortholog is 100%.
Bootstrap support for L0P7Z9 as seed ortholog is 100%.

Group of orthologs #880. Best score 162 bits
Score difference with first non-orthologous sequence - A.carolinensis:162 P.jiroveci:162

H9GA26              	100.00%		L0PE13              	100.00%
Bootstrap support for H9GA26 as seed ortholog is 100%.
Bootstrap support for L0PE13 as seed ortholog is 100%.

Group of orthologs #881. Best score 161 bits
Score difference with first non-orthologous sequence - A.carolinensis:112 P.jiroveci:161

G1KDG1              	100.00%		L0PD70              	100.00%
                    	       		L0P9Q7              	81.85%
Bootstrap support for G1KDG1 as seed ortholog is 99%.
Bootstrap support for L0PD70 as seed ortholog is 100%.

Group of orthologs #882. Best score 161 bits
Score difference with first non-orthologous sequence - A.carolinensis:161 P.jiroveci:161

G1KPU1              	100.00%		L0PAB8              	100.00%
Bootstrap support for G1KPU1 as seed ortholog is 100%.
Bootstrap support for L0PAB8 as seed ortholog is 100%.

Group of orthologs #883. Best score 161 bits
Score difference with first non-orthologous sequence - A.carolinensis:161 P.jiroveci:161

G1KZ99              	100.00%		L0PBD4              	100.00%
Bootstrap support for G1KZ99 as seed ortholog is 100%.
Bootstrap support for L0PBD4 as seed ortholog is 100%.

Group of orthologs #884. Best score 161 bits
Score difference with first non-orthologous sequence - A.carolinensis:161 P.jiroveci:161

H9G4E2              	100.00%		L0PCP5              	100.00%
Bootstrap support for H9G4E2 as seed ortholog is 100%.
Bootstrap support for L0PCP5 as seed ortholog is 100%.

Group of orthologs #885. Best score 161 bits
Score difference with first non-orthologous sequence - A.carolinensis:161 P.jiroveci:161

H9G7E1              	100.00%		L0PCU6              	100.00%
Bootstrap support for H9G7E1 as seed ortholog is 100%.
Bootstrap support for L0PCU6 as seed ortholog is 100%.

Group of orthologs #886. Best score 161 bits
Score difference with first non-orthologous sequence - A.carolinensis:161 P.jiroveci:161

H9GDF5              	100.00%		L0P7V8              	100.00%
Bootstrap support for H9GDF5 as seed ortholog is 100%.
Bootstrap support for L0P7V8 as seed ortholog is 100%.

Group of orthologs #887. Best score 160 bits
Score difference with first non-orthologous sequence - A.carolinensis:160 P.jiroveci:160

H9G3C9              	100.00%		L0P8Y0              	100.00%
Bootstrap support for H9G3C9 as seed ortholog is 100%.
Bootstrap support for L0P8Y0 as seed ortholog is 100%.

Group of orthologs #888. Best score 160 bits
Score difference with first non-orthologous sequence - A.carolinensis:160 P.jiroveci:160

G1KSY0              	100.00%		L0PFY6              	100.00%
Bootstrap support for G1KSY0 as seed ortholog is 100%.
Bootstrap support for L0PFY6 as seed ortholog is 100%.

Group of orthologs #889. Best score 160 bits
Score difference with first non-orthologous sequence - A.carolinensis:160 P.jiroveci:160

H9GHN1              	100.00%		L0PD43              	100.00%
Bootstrap support for H9GHN1 as seed ortholog is 100%.
Bootstrap support for L0PD43 as seed ortholog is 100%.

Group of orthologs #890. Best score 159 bits
Score difference with first non-orthologous sequence - A.carolinensis:44 P.jiroveci:111

G1KF28              	100.00%		L0PE79              	100.00%
G1KQH0              	100.00%		
H9GP94              	100.00%		
H9G8B9              	87.68%		
H9GNS2              	75.35%		
G1KBI1              	74.78%		
G1K8X3              	32.70%		
G1KL05              	30.33%		
G1KPD4              	15.35%		
G1KCB1              	13.49%		
G1KCH3              	13.49%		
H9GQ35              	12.56%		
G1KPH1              	11.16%		
G1KU67              	9.77%		
Bootstrap support for G1KF28 as seed ortholog is 97%.
Bootstrap support for G1KQH0 as seed ortholog is 97%.
Bootstrap support for H9GP94 as seed ortholog is 96%.
Bootstrap support for L0PE79 as seed ortholog is 99%.

Group of orthologs #891. Best score 159 bits
Score difference with first non-orthologous sequence - A.carolinensis:159 P.jiroveci:17

L7MTL6              	100.00%		L0PBR7              	100.00%
L7MZJ7              	100.00%		
H9GVS6              	97.67%		
H9GM44              	97.67%		
H9GM54              	97.67%		
H9GRD7              	96.51%		
Bootstrap support for L7MTL6 as seed ortholog is 100%.
Bootstrap support for L7MZJ7 as seed ortholog is 100%.
Bootstrap support for L0PBR7 as seed ortholog is 93%.

Group of orthologs #892. Best score 159 bits
Score difference with first non-orthologous sequence - A.carolinensis:68 P.jiroveci:73

G1KLL9              	100.00%		L0P9Y3              	100.00%
G1KD34              	34.74%		
G1K8U8              	34.27%		
G1KV16              	33.80%		
Bootstrap support for G1KLL9 as seed ortholog is 96%.
Bootstrap support for L0P9Y3 as seed ortholog is 94%.

Group of orthologs #893. Best score 159 bits
Score difference with first non-orthologous sequence - A.carolinensis:159 P.jiroveci:159

G1KKS2              	100.00%		L0P7D0              	100.00%
H9GUA7              	25.16%		
Bootstrap support for G1KKS2 as seed ortholog is 100%.
Bootstrap support for L0P7D0 as seed ortholog is 100%.

Group of orthologs #894. Best score 159 bits
Score difference with first non-orthologous sequence - A.carolinensis:159 P.jiroveci:159

H9GBN4              	100.00%		L0PFY9              	100.00%
H9GCT3              	100.00%		
Bootstrap support for H9GBN4 as seed ortholog is 100%.
Bootstrap support for H9GCT3 as seed ortholog is 100%.
Bootstrap support for L0PFY9 as seed ortholog is 100%.

Group of orthologs #895. Best score 159 bits
Score difference with first non-orthologous sequence - A.carolinensis:159 P.jiroveci:159

G1K986              	100.00%		L0P948              	100.00%
Bootstrap support for G1K986 as seed ortholog is 100%.
Bootstrap support for L0P948 as seed ortholog is 100%.

Group of orthologs #896. Best score 159 bits
Score difference with first non-orthologous sequence - A.carolinensis:159 P.jiroveci:159

G1KAU8              	100.00%		L0PEN8              	100.00%
Bootstrap support for G1KAU8 as seed ortholog is 100%.
Bootstrap support for L0PEN8 as seed ortholog is 100%.

Group of orthologs #897. Best score 159 bits
Score difference with first non-orthologous sequence - A.carolinensis:159 P.jiroveci:159

G1KF33              	100.00%		L0PFL1              	100.00%
Bootstrap support for G1KF33 as seed ortholog is 100%.
Bootstrap support for L0PFL1 as seed ortholog is 100%.

Group of orthologs #898. Best score 159 bits
Score difference with first non-orthologous sequence - A.carolinensis:159 P.jiroveci:159

H9GBL0              	100.00%		L0P9X0              	100.00%
Bootstrap support for H9GBL0 as seed ortholog is 100%.
Bootstrap support for L0P9X0 as seed ortholog is 100%.

Group of orthologs #899. Best score 159 bits
Score difference with first non-orthologous sequence - A.carolinensis:159 P.jiroveci:159

H9GP98              	100.00%		L0PD11              	100.00%
Bootstrap support for H9GP98 as seed ortholog is 100%.
Bootstrap support for L0PD11 as seed ortholog is 100%.

Group of orthologs #900. Best score 159 bits
Score difference with first non-orthologous sequence - A.carolinensis:63 P.jiroveci:159

H9GVW9              	100.00%		L0PDL7              	100.00%
Bootstrap support for H9GVW9 as seed ortholog is 98%.
Bootstrap support for L0PDL7 as seed ortholog is 100%.

Group of orthologs #901. Best score 158 bits
Score difference with first non-orthologous sequence - A.carolinensis:158 P.jiroveci:158

H9G5P6              	100.00%		L0PI55              	100.00%
                    	       		L0P840              	83.49%
Bootstrap support for H9G5P6 as seed ortholog is 100%.
Bootstrap support for L0PI55 as seed ortholog is 100%.

Group of orthologs #902. Best score 158 bits
Score difference with first non-orthologous sequence - A.carolinensis:67 P.jiroveci:104

G1K9G0              	100.00%		L0PBF9              	100.00%
Bootstrap support for G1K9G0 as seed ortholog is 98%.
Bootstrap support for L0PBF9 as seed ortholog is 99%.

Group of orthologs #903. Best score 158 bits
Score difference with first non-orthologous sequence - A.carolinensis:158 P.jiroveci:34

G1K8D9              	100.00%		L0PCJ0              	100.00%
Bootstrap support for G1K8D9 as seed ortholog is 100%.
Bootstrap support for L0PCJ0 as seed ortholog is 72%.
Alternative seed ortholog is L0PGZ6 (34 bits away from this cluster)

Group of orthologs #904. Best score 158 bits
Score difference with first non-orthologous sequence - A.carolinensis:77 P.jiroveci:112

H9GMV0              	100.00%		L0P9D2              	100.00%
Bootstrap support for H9GMV0 as seed ortholog is 99%.
Bootstrap support for L0P9D2 as seed ortholog is 100%.

Group of orthologs #905. Best score 157 bits
Score difference with first non-orthologous sequence - A.carolinensis:64 P.jiroveci:157

H9GHY3              	100.00%		L0P9F8              	100.00%
G1KMU9              	20.46%		
Bootstrap support for H9GHY3 as seed ortholog is 99%.
Bootstrap support for L0P9F8 as seed ortholog is 100%.

Group of orthologs #906. Best score 157 bits
Score difference with first non-orthologous sequence - A.carolinensis:157 P.jiroveci:157

G1KII4              	100.00%		L0PGF9              	100.00%
Bootstrap support for G1KII4 as seed ortholog is 100%.
Bootstrap support for L0PGF9 as seed ortholog is 100%.

Group of orthologs #907. Best score 157 bits
Score difference with first non-orthologous sequence - A.carolinensis:157 P.jiroveci:157

G1KN99              	100.00%		L0PCA8              	100.00%
Bootstrap support for G1KN99 as seed ortholog is 100%.
Bootstrap support for L0PCA8 as seed ortholog is 100%.

Group of orthologs #908. Best score 157 bits
Score difference with first non-orthologous sequence - A.carolinensis:43 P.jiroveci:43

G1KYS9              	100.00%		L0PGL7              	100.00%
Bootstrap support for G1KYS9 as seed ortholog is 90%.
Bootstrap support for L0PGL7 as seed ortholog is 94%.

Group of orthologs #909. Best score 156 bits
Score difference with first non-orthologous sequence - A.carolinensis:89 P.jiroveci:156

G1KN60              	100.00%		L0PAV2              	100.00%
H9GIR6              	52.02%		
G1KG94              	49.33%		
G1KX10              	23.40%		
G1KTC4              	7.58%		
G1KK21              	6.23%		
G1KK24              	5.56%		
Bootstrap support for G1KN60 as seed ortholog is 99%.
Bootstrap support for L0PAV2 as seed ortholog is 100%.

Group of orthologs #910. Best score 156 bits
Score difference with first non-orthologous sequence - A.carolinensis:156 P.jiroveci:156

H9G7R0              	100.00%		L0PAW6              	100.00%
G1K9B4              	23.44%		
H9GJ46              	13.88%		
G1KN88              	8.13%		
Bootstrap support for H9G7R0 as seed ortholog is 100%.
Bootstrap support for L0PAW6 as seed ortholog is 100%.

Group of orthologs #911. Best score 156 bits
Score difference with first non-orthologous sequence - A.carolinensis:156 P.jiroveci:156

G1KUP0              	100.00%		L0PDR9              	100.00%
                    	       		L0P8I3              	71.99%
Bootstrap support for G1KUP0 as seed ortholog is 100%.
Bootstrap support for L0PDR9 as seed ortholog is 100%.

Group of orthologs #912. Best score 156 bits
Score difference with first non-orthologous sequence - A.carolinensis:41 P.jiroveci:156

G1KAI5              	100.00%		L0PDJ7              	100.00%
Bootstrap support for G1KAI5 as seed ortholog is 96%.
Bootstrap support for L0PDJ7 as seed ortholog is 100%.

Group of orthologs #913. Best score 156 bits
Score difference with first non-orthologous sequence - A.carolinensis:156 P.jiroveci:156

G1K9V4              	100.00%		L0PFG9              	100.00%
Bootstrap support for G1K9V4 as seed ortholog is 100%.
Bootstrap support for L0PFG9 as seed ortholog is 100%.

Group of orthologs #914. Best score 156 bits
Score difference with first non-orthologous sequence - A.carolinensis:156 P.jiroveci:156

G1KDS0              	100.00%		L0PFQ7              	100.00%
Bootstrap support for G1KDS0 as seed ortholog is 100%.
Bootstrap support for L0PFQ7 as seed ortholog is 100%.

Group of orthologs #915. Best score 156 bits
Score difference with first non-orthologous sequence - A.carolinensis:156 P.jiroveci:156

G1KFQ7              	100.00%		L0PF65              	100.00%
Bootstrap support for G1KFQ7 as seed ortholog is 100%.
Bootstrap support for L0PF65 as seed ortholog is 100%.

Group of orthologs #916. Best score 156 bits
Score difference with first non-orthologous sequence - A.carolinensis:156 P.jiroveci:156

G1KNX3              	100.00%		L0PDH1              	100.00%
Bootstrap support for G1KNX3 as seed ortholog is 100%.
Bootstrap support for L0PDH1 as seed ortholog is 100%.

Group of orthologs #917. Best score 156 bits
Score difference with first non-orthologous sequence - A.carolinensis:156 P.jiroveci:156

H9G8A4              	100.00%		L0PDZ3              	100.00%
Bootstrap support for H9G8A4 as seed ortholog is 100%.
Bootstrap support for L0PDZ3 as seed ortholog is 100%.

Group of orthologs #918. Best score 155 bits
Score difference with first non-orthologous sequence - A.carolinensis:16 P.jiroveci:67

H9G7N6              	100.00%		L0PGT3              	100.00%
G1KFF2              	8.52%		
Bootstrap support for H9G7N6 as seed ortholog is 76%.
Bootstrap support for L0PGT3 as seed ortholog is 99%.

Group of orthologs #919. Best score 155 bits
Score difference with first non-orthologous sequence - A.carolinensis:7 P.jiroveci:155

G1KBY7              	100.00%		L0PH23              	100.00%
Bootstrap support for G1KBY7 as seed ortholog is 59%.
Alternative seed ortholog is H9GA59 (7 bits away from this cluster)
Bootstrap support for L0PH23 as seed ortholog is 100%.

Group of orthologs #920. Best score 155 bits
Score difference with first non-orthologous sequence - A.carolinensis:155 P.jiroveci:38

G1KD75              	100.00%		L0PGP9              	100.00%
Bootstrap support for G1KD75 as seed ortholog is 100%.
Bootstrap support for L0PGP9 as seed ortholog is 85%.

Group of orthologs #921. Best score 155 bits
Score difference with first non-orthologous sequence - A.carolinensis:155 P.jiroveci:155

G1KQ25              	100.00%		L0PGI9              	100.00%
Bootstrap support for G1KQ25 as seed ortholog is 100%.
Bootstrap support for L0PGI9 as seed ortholog is 100%.

Group of orthologs #922. Best score 154 bits
Score difference with first non-orthologous sequence - A.carolinensis:154 P.jiroveci:154

H9G4S6              	100.00%		L0PDW9              	100.00%
H9GP24              	25.23%		
Bootstrap support for H9G4S6 as seed ortholog is 100%.
Bootstrap support for L0PDW9 as seed ortholog is 100%.

Group of orthologs #923. Best score 154 bits
Score difference with first non-orthologous sequence - A.carolinensis:6 P.jiroveci:71

G1KAI8              	100.00%		L0PCI0              	100.00%
Bootstrap support for G1KAI8 as seed ortholog is 73%.
Alternative seed ortholog is G1KR43 (6 bits away from this cluster)
Bootstrap support for L0PCI0 as seed ortholog is 92%.

Group of orthologs #924. Best score 154 bits
Score difference with first non-orthologous sequence - A.carolinensis:154 P.jiroveci:154

H9GG52              	100.00%		L0PFW4              	100.00%
Bootstrap support for H9GG52 as seed ortholog is 100%.
Bootstrap support for L0PFW4 as seed ortholog is 100%.

Group of orthologs #925. Best score 153 bits
Score difference with first non-orthologous sequence - A.carolinensis:153 P.jiroveci:153

G1KS11              	100.00%		L0PBI9              	100.00%
H9GBK1              	87.69%		
Bootstrap support for G1KS11 as seed ortholog is 100%.
Bootstrap support for L0PBI9 as seed ortholog is 100%.

Group of orthologs #926. Best score 153 bits
Score difference with first non-orthologous sequence - A.carolinensis:55 P.jiroveci:153

H9GDG5              	100.00%		L0PF33              	100.00%
Bootstrap support for H9GDG5 as seed ortholog is 99%.
Bootstrap support for L0PF33 as seed ortholog is 100%.

Group of orthologs #927. Best score 152 bits
Score difference with first non-orthologous sequence - A.carolinensis:152 P.jiroveci:152

H9GJU4              	100.00%		L0P7U6              	100.00%
Bootstrap support for H9GJU4 as seed ortholog is 100%.
Bootstrap support for L0P7U6 as seed ortholog is 100%.

Group of orthologs #928. Best score 152 bits
Score difference with first non-orthologous sequence - A.carolinensis:152 P.jiroveci:152

H9GKD2              	100.00%		L0P852              	100.00%
Bootstrap support for H9GKD2 as seed ortholog is 100%.
Bootstrap support for L0P852 as seed ortholog is 100%.

Group of orthologs #929. Best score 151 bits
Score difference with first non-orthologous sequence - A.carolinensis:151 P.jiroveci:151

G1KB59              	100.00%		L0PA22              	100.00%
Bootstrap support for G1KB59 as seed ortholog is 100%.
Bootstrap support for L0PA22 as seed ortholog is 100%.

Group of orthologs #930. Best score 151 bits
Score difference with first non-orthologous sequence - A.carolinensis:151 P.jiroveci:151

G1KKH2              	100.00%		L0P9D1              	100.00%
Bootstrap support for G1KKH2 as seed ortholog is 100%.
Bootstrap support for L0P9D1 as seed ortholog is 100%.

Group of orthologs #931. Best score 151 bits
Score difference with first non-orthologous sequence - A.carolinensis:151 P.jiroveci:151

G1KH65              	100.00%		L0PEL6              	100.00%
Bootstrap support for G1KH65 as seed ortholog is 100%.
Bootstrap support for L0PEL6 as seed ortholog is 100%.

Group of orthologs #932. Best score 151 bits
Score difference with first non-orthologous sequence - A.carolinensis:151 P.jiroveci:151

G1KHE7              	100.00%		L0PHD0              	100.00%
Bootstrap support for G1KHE7 as seed ortholog is 100%.
Bootstrap support for L0PHD0 as seed ortholog is 100%.

Group of orthologs #933. Best score 151 bits
Score difference with first non-orthologous sequence - A.carolinensis:151 P.jiroveci:151

G1KMC4              	100.00%		L0PCG3              	100.00%
Bootstrap support for G1KMC4 as seed ortholog is 100%.
Bootstrap support for L0PCG3 as seed ortholog is 100%.

Group of orthologs #934. Best score 151 bits
Score difference with first non-orthologous sequence - A.carolinensis:77 P.jiroveci:151

H9G8F5              	100.00%		L0PDB9              	100.00%
Bootstrap support for H9G8F5 as seed ortholog is 96%.
Bootstrap support for L0PDB9 as seed ortholog is 100%.

Group of orthologs #935. Best score 151 bits
Score difference with first non-orthologous sequence - A.carolinensis:151 P.jiroveci:151

H9GDA0              	100.00%		L0PEG0              	100.00%
Bootstrap support for H9GDA0 as seed ortholog is 100%.
Bootstrap support for L0PEG0 as seed ortholog is 100%.

Group of orthologs #936. Best score 151 bits
Score difference with first non-orthologous sequence - A.carolinensis:151 P.jiroveci:151

H9GI72              	100.00%		L0PCN2              	100.00%
Bootstrap support for H9GI72 as seed ortholog is 100%.
Bootstrap support for L0PCN2 as seed ortholog is 100%.

Group of orthologs #937. Best score 150 bits
Score difference with first non-orthologous sequence - A.carolinensis:150 P.jiroveci:150

H9GHZ2              	100.00%		L0P9G8              	100.00%
                    	       		L0PDI0              	53.61%
Bootstrap support for H9GHZ2 as seed ortholog is 100%.
Bootstrap support for L0P9G8 as seed ortholog is 100%.

Group of orthologs #938. Best score 149 bits
Score difference with first non-orthologous sequence - A.carolinensis:149 P.jiroveci:149

G1K9S8              	100.00%		L0PG38              	100.00%
H9G4J1              	87.59%		
Bootstrap support for G1K9S8 as seed ortholog is 100%.
Bootstrap support for L0PG38 as seed ortholog is 100%.

Group of orthologs #939. Best score 149 bits
Score difference with first non-orthologous sequence - A.carolinensis:149 P.jiroveci:149

G1KHD1              	100.00%		L0PB34              	100.00%
G1KJ02              	61.73%		
Bootstrap support for G1KHD1 as seed ortholog is 100%.
Bootstrap support for L0PB34 as seed ortholog is 100%.

Group of orthologs #940. Best score 149 bits
Score difference with first non-orthologous sequence - A.carolinensis:54 P.jiroveci:149

H9GAP7              	100.00%		L0P7E9              	100.00%
H9GPM1              	6.00%		
Bootstrap support for H9GAP7 as seed ortholog is 98%.
Bootstrap support for L0P7E9 as seed ortholog is 100%.

Group of orthologs #941. Best score 149 bits
Score difference with first non-orthologous sequence - A.carolinensis:149 P.jiroveci:149

G1K8R3              	100.00%		L0PBP9              	100.00%
Bootstrap support for G1K8R3 as seed ortholog is 100%.
Bootstrap support for L0PBP9 as seed ortholog is 100%.

Group of orthologs #942. Best score 149 bits
Score difference with first non-orthologous sequence - A.carolinensis:149 P.jiroveci:149

G1KSE6              	100.00%		L0P8G7              	100.00%
Bootstrap support for G1KSE6 as seed ortholog is 100%.
Bootstrap support for L0P8G7 as seed ortholog is 100%.

Group of orthologs #943. Best score 149 bits
Score difference with first non-orthologous sequence - A.carolinensis:149 P.jiroveci:149

G1KUF2              	100.00%		L0PA48              	100.00%
Bootstrap support for G1KUF2 as seed ortholog is 100%.
Bootstrap support for L0PA48 as seed ortholog is 100%.

Group of orthologs #944. Best score 149 bits
Score difference with first non-orthologous sequence - A.carolinensis:39 P.jiroveci:77

H9GCF2              	100.00%		L0PAG6              	100.00%
Bootstrap support for H9GCF2 as seed ortholog is 89%.
Bootstrap support for L0PAG6 as seed ortholog is 98%.

Group of orthologs #945. Best score 149 bits
Score difference with first non-orthologous sequence - A.carolinensis:149 P.jiroveci:149

H9G8U8              	100.00%		L0PEV3              	100.00%
Bootstrap support for H9G8U8 as seed ortholog is 100%.
Bootstrap support for L0PEV3 as seed ortholog is 100%.

Group of orthologs #946. Best score 148 bits
Score difference with first non-orthologous sequence - A.carolinensis:148 P.jiroveci:148

G1KFC8              	100.00%		L0PDI9              	100.00%
H9G7M8              	36.72%		
Bootstrap support for G1KFC8 as seed ortholog is 100%.
Bootstrap support for L0PDI9 as seed ortholog is 100%.

Group of orthologs #947. Best score 148 bits
Score difference with first non-orthologous sequence - A.carolinensis:148 P.jiroveci:148

G1K8L7              	100.00%		L0P872              	100.00%
Bootstrap support for G1K8L7 as seed ortholog is 100%.
Bootstrap support for L0P872 as seed ortholog is 100%.

Group of orthologs #948. Best score 148 bits
Score difference with first non-orthologous sequence - A.carolinensis:40 P.jiroveci:103

G1KKH0              	100.00%		L0PDE1              	100.00%
Bootstrap support for G1KKH0 as seed ortholog is 92%.
Bootstrap support for L0PDE1 as seed ortholog is 99%.

Group of orthologs #949. Best score 148 bits
Score difference with first non-orthologous sequence - A.carolinensis:148 P.jiroveci:148

G1KRW2              	100.00%		L0P8J7              	100.00%
Bootstrap support for G1KRW2 as seed ortholog is 100%.
Bootstrap support for L0P8J7 as seed ortholog is 100%.

Group of orthologs #950. Best score 148 bits
Score difference with first non-orthologous sequence - A.carolinensis:76 P.jiroveci:148

H9G9T7              	100.00%		L0P8I2              	100.00%
Bootstrap support for H9G9T7 as seed ortholog is 99%.
Bootstrap support for L0P8I2 as seed ortholog is 100%.

Group of orthologs #951. Best score 148 bits
Score difference with first non-orthologous sequence - A.carolinensis:148 P.jiroveci:148

H9GDB9              	100.00%		L0PFD5              	100.00%
Bootstrap support for H9GDB9 as seed ortholog is 100%.
Bootstrap support for L0PFD5 as seed ortholog is 100%.

Group of orthologs #952. Best score 147 bits
Score difference with first non-orthologous sequence - A.carolinensis:4 P.jiroveci:147

G1KB62              	100.00%		L0PCJ7              	100.00%
G1K9Z9              	5.59%		
Bootstrap support for G1KB62 as seed ortholog is 50%.
Alternative seed ortholog is G1KCA0 (4 bits away from this cluster)
Bootstrap support for L0PCJ7 as seed ortholog is 100%.

Group of orthologs #953. Best score 147 bits
Score difference with first non-orthologous sequence - A.carolinensis:147 P.jiroveci:147

G1KAB8              	100.00%		L0PDV9              	100.00%
Bootstrap support for G1KAB8 as seed ortholog is 100%.
Bootstrap support for L0PDV9 as seed ortholog is 100%.

Group of orthologs #954. Best score 147 bits
Score difference with first non-orthologous sequence - A.carolinensis:147 P.jiroveci:147

G1KPS4              	100.00%		L0P9U0              	100.00%
Bootstrap support for G1KPS4 as seed ortholog is 100%.
Bootstrap support for L0P9U0 as seed ortholog is 100%.

Group of orthologs #955. Best score 147 bits
Score difference with first non-orthologous sequence - A.carolinensis:44 P.jiroveci:147

H9GMS0              	100.00%		L0P903              	100.00%
Bootstrap support for H9GMS0 as seed ortholog is 91%.
Bootstrap support for L0P903 as seed ortholog is 100%.

Group of orthologs #956. Best score 146 bits
Score difference with first non-orthologous sequence - A.carolinensis:146 P.jiroveci:146

G1K8M8              	100.00%		L0PD01              	100.00%
                    	       		L0PF42              	100.00%
Bootstrap support for G1K8M8 as seed ortholog is 100%.
Bootstrap support for L0PD01 as seed ortholog is 100%.
Bootstrap support for L0PF42 as seed ortholog is 100%.

Group of orthologs #957. Best score 146 bits
Score difference with first non-orthologous sequence - A.carolinensis:146 P.jiroveci:146

H9G5Y4              	100.00%		L0PEB8              	100.00%
G1KRT3              	37.78%		
Bootstrap support for H9G5Y4 as seed ortholog is 100%.
Bootstrap support for L0PEB8 as seed ortholog is 100%.

Group of orthologs #958. Best score 145 bits
Score difference with first non-orthologous sequence - A.carolinensis:145 P.jiroveci:145

G1KIR1              	100.00%		L0PAS7              	100.00%
Bootstrap support for G1KIR1 as seed ortholog is 100%.
Bootstrap support for L0PAS7 as seed ortholog is 100%.

Group of orthologs #959. Best score 145 bits
Score difference with first non-orthologous sequence - A.carolinensis:145 P.jiroveci:145

H9G4B0              	100.00%		L0PFP7              	100.00%
Bootstrap support for H9G4B0 as seed ortholog is 100%.
Bootstrap support for L0PFP7 as seed ortholog is 100%.

Group of orthologs #960. Best score 144 bits
Score difference with first non-orthologous sequence - A.carolinensis:74 P.jiroveci:144

G1KED3              	100.00%		L0P805              	100.00%
G1KA67              	50.78%		
G1KMR8              	45.57%		
Bootstrap support for G1KED3 as seed ortholog is 99%.
Bootstrap support for L0P805 as seed ortholog is 100%.

Group of orthologs #961. Best score 144 bits
Score difference with first non-orthologous sequence - A.carolinensis:144 P.jiroveci:144

G1KI09              	100.00%		L0PEQ2              	100.00%
H9G5N6              	24.61%		L0P999              	59.60%
Bootstrap support for G1KI09 as seed ortholog is 100%.
Bootstrap support for L0PEQ2 as seed ortholog is 100%.

Group of orthologs #962. Best score 144 bits
Score difference with first non-orthologous sequence - A.carolinensis:20 P.jiroveci:144

H9GHF9              	100.00%		L0PG65              	100.00%
G1KXE6              	8.28%		
G1KNP7              	5.59%		
Bootstrap support for H9GHF9 as seed ortholog is 68%.
Alternative seed ortholog is G1KGW1 (20 bits away from this cluster)
Bootstrap support for L0PG65 as seed ortholog is 100%.

Group of orthologs #963. Best score 144 bits
Score difference with first non-orthologous sequence - A.carolinensis:144 P.jiroveci:144

G1K9Z3              	100.00%		L0PFP4              	100.00%
Bootstrap support for G1K9Z3 as seed ortholog is 100%.
Bootstrap support for L0PFP4 as seed ortholog is 100%.

Group of orthologs #964. Best score 144 bits
Score difference with first non-orthologous sequence - A.carolinensis:144 P.jiroveci:144

H9G4G4              	100.00%		L0PAY0              	100.00%
Bootstrap support for H9G4G4 as seed ortholog is 100%.
Bootstrap support for L0PAY0 as seed ortholog is 100%.

Group of orthologs #965. Best score 144 bits
Score difference with first non-orthologous sequence - A.carolinensis:144 P.jiroveci:144

H9G9J8              	100.00%		L0PCQ2              	100.00%
Bootstrap support for H9G9J8 as seed ortholog is 100%.
Bootstrap support for L0PCQ2 as seed ortholog is 100%.

Group of orthologs #966. Best score 143 bits
Score difference with first non-orthologous sequence - A.carolinensis:143 P.jiroveci:143

G1KI69              	100.00%		L0PCC8              	100.00%
Bootstrap support for G1KI69 as seed ortholog is 100%.
Bootstrap support for L0PCC8 as seed ortholog is 100%.

Group of orthologs #967. Best score 143 bits
Score difference with first non-orthologous sequence - A.carolinensis:143 P.jiroveci:143

G1KUJ1              	100.00%		L0P7Y4              	100.00%
Bootstrap support for G1KUJ1 as seed ortholog is 100%.
Bootstrap support for L0P7Y4 as seed ortholog is 100%.

Group of orthologs #968. Best score 143 bits
Score difference with first non-orthologous sequence - A.carolinensis:143 P.jiroveci:143

G1KWA2              	100.00%		L0P733              	100.00%
Bootstrap support for G1KWA2 as seed ortholog is 100%.
Bootstrap support for L0P733 as seed ortholog is 100%.

Group of orthologs #969. Best score 143 bits
Score difference with first non-orthologous sequence - A.carolinensis:143 P.jiroveci:143

G1KTN9              	100.00%		L0PFS7              	100.00%
Bootstrap support for G1KTN9 as seed ortholog is 100%.
Bootstrap support for L0PFS7 as seed ortholog is 100%.

Group of orthologs #970. Best score 143 bits
Score difference with first non-orthologous sequence - A.carolinensis:143 P.jiroveci:143

G1KTJ4              	100.00%		L0PG78              	100.00%
Bootstrap support for G1KTJ4 as seed ortholog is 100%.
Bootstrap support for L0PG78 as seed ortholog is 100%.

Group of orthologs #971. Best score 143 bits
Score difference with first non-orthologous sequence - A.carolinensis:143 P.jiroveci:143

H9G4E9              	100.00%		L0PEG7              	100.00%
Bootstrap support for H9G4E9 as seed ortholog is 100%.
Bootstrap support for L0PEG7 as seed ortholog is 100%.

Group of orthologs #972. Best score 143 bits
Score difference with first non-orthologous sequence - A.carolinensis:93 P.jiroveci:143

H9GBV6              	100.00%		L0PA67              	100.00%
Bootstrap support for H9GBV6 as seed ortholog is 99%.
Bootstrap support for L0PA67 as seed ortholog is 100%.

Group of orthologs #973. Best score 142 bits
Score difference with first non-orthologous sequence - A.carolinensis:142 P.jiroveci:142

G1K922              	100.00%		L0PFW3              	100.00%
Bootstrap support for G1K922 as seed ortholog is 100%.
Bootstrap support for L0PFW3 as seed ortholog is 100%.

Group of orthologs #974. Best score 142 bits
Score difference with first non-orthologous sequence - A.carolinensis:142 P.jiroveci:142

H9GCB0              	100.00%		L0PFH2              	100.00%
Bootstrap support for H9GCB0 as seed ortholog is 100%.
Bootstrap support for L0PFH2 as seed ortholog is 100%.

Group of orthologs #975. Best score 141 bits
Score difference with first non-orthologous sequence - A.carolinensis:141 P.jiroveci:141

H9G4Z9              	100.00%		L0P9V3              	100.00%
Bootstrap support for H9G4Z9 as seed ortholog is 100%.
Bootstrap support for L0P9V3 as seed ortholog is 100%.

Group of orthologs #976. Best score 141 bits
Score difference with first non-orthologous sequence - A.carolinensis:60 P.jiroveci:141

H9GID7              	100.00%		L0PBZ4              	100.00%
Bootstrap support for H9GID7 as seed ortholog is 98%.
Bootstrap support for L0PBZ4 as seed ortholog is 100%.

Group of orthologs #977. Best score 140 bits
Score difference with first non-orthologous sequence - A.carolinensis:1 P.jiroveci:140

H9GNV4              	100.00%		L0PFI0              	100.00%
G1KIN1              	72.57%		
Bootstrap support for H9GNV4 as seed ortholog is 54%.
Alternative seed ortholog is H9GKK5 (1 bits away from this cluster)
Bootstrap support for L0PFI0 as seed ortholog is 100%.

Group of orthologs #978. Best score 140 bits
Score difference with first non-orthologous sequence - A.carolinensis:140 P.jiroveci:140

H9GJW6              	100.00%		L0P778              	100.00%
Bootstrap support for H9GJW6 as seed ortholog is 100%.
Bootstrap support for L0P778 as seed ortholog is 100%.

Group of orthologs #979. Best score 139 bits
Score difference with first non-orthologous sequence - A.carolinensis:139 P.jiroveci:139

G1KNA8              	100.00%		L0PDW7              	100.00%
                    	       		L0PIN1              	58.90%
Bootstrap support for G1KNA8 as seed ortholog is 100%.
Bootstrap support for L0PDW7 as seed ortholog is 100%.

Group of orthologs #980. Best score 139 bits
Score difference with first non-orthologous sequence - A.carolinensis:139 P.jiroveci:139

H9GLC9              	100.00%		L0PE48              	100.00%
H9GT41              	49.78%		
Bootstrap support for H9GLC9 as seed ortholog is 100%.
Bootstrap support for L0PE48 as seed ortholog is 100%.

Group of orthologs #981. Best score 139 bits
Score difference with first non-orthologous sequence - A.carolinensis:139 P.jiroveci:139

G1KFJ6              	100.00%		L0P9F2              	100.00%
Bootstrap support for G1KFJ6 as seed ortholog is 100%.
Bootstrap support for L0P9F2 as seed ortholog is 100%.

Group of orthologs #982. Best score 139 bits
Score difference with first non-orthologous sequence - A.carolinensis:139 P.jiroveci:139

G1KLR6              	100.00%		L0PA83              	100.00%
Bootstrap support for G1KLR6 as seed ortholog is 100%.
Bootstrap support for L0PA83 as seed ortholog is 100%.

Group of orthologs #983. Best score 138 bits
Score difference with first non-orthologous sequence - A.carolinensis:138 P.jiroveci:138

G1KG78              	100.00%		L0P938              	100.00%
G1KWU6              	60.77%		
Bootstrap support for G1KG78 as seed ortholog is 100%.
Bootstrap support for L0P938 as seed ortholog is 100%.

Group of orthologs #984. Best score 138 bits
Score difference with first non-orthologous sequence - A.carolinensis:138 P.jiroveci:138

G1KMB0              	100.00%		L0PGF6              	100.00%
H9GLA1              	51.71%		
Bootstrap support for G1KMB0 as seed ortholog is 100%.
Bootstrap support for L0PGF6 as seed ortholog is 100%.

Group of orthologs #985. Best score 138 bits
Score difference with first non-orthologous sequence - A.carolinensis:138 P.jiroveci:138

H9GJ58              	100.00%		L0PE36              	100.00%
G1KDY4              	45.74%		
Bootstrap support for H9GJ58 as seed ortholog is 100%.
Bootstrap support for L0PE36 as seed ortholog is 100%.

Group of orthologs #986. Best score 138 bits
Score difference with first non-orthologous sequence - A.carolinensis:138 P.jiroveci:138

G1K9Q3              	100.00%		L0PEZ4              	100.00%
Bootstrap support for G1K9Q3 as seed ortholog is 100%.
Bootstrap support for L0PEZ4 as seed ortholog is 100%.

Group of orthologs #987. Best score 138 bits
Score difference with first non-orthologous sequence - A.carolinensis:72 P.jiroveci:138

G1KJP8              	100.00%		L0PCT4              	100.00%
Bootstrap support for G1KJP8 as seed ortholog is 94%.
Bootstrap support for L0PCT4 as seed ortholog is 100%.

Group of orthologs #988. Best score 137 bits
Score difference with first non-orthologous sequence - A.carolinensis:137 P.jiroveci:137

G1KGY5              	100.00%		L0PE18              	100.00%
G1KL08              	28.66%		
G1KL23              	24.89%		
G1KYZ2              	24.71%		
G1KVS9              	24.08%		
G1KUY8              	23.63%		
D2X2H8              	14.11%		
D2X2H9              	13.48%		
G1KDB8              	12.13%		
H9GHC5              	11.41%		
L7MZQ8              	10.33%		
H9GGH4              	9.88%		
G1KCY5              	9.79%		
H9GB75              	9.61%		
H9G4C9              	8.81%		
Bootstrap support for G1KGY5 as seed ortholog is 100%.
Bootstrap support for L0PE18 as seed ortholog is 100%.

Group of orthologs #989. Best score 137 bits
Score difference with first non-orthologous sequence - A.carolinensis:137 P.jiroveci:89

G1KDF2              	100.00%		L0P800              	100.00%
G1KH23              	55.88%		
Bootstrap support for G1KDF2 as seed ortholog is 100%.
Bootstrap support for L0P800 as seed ortholog is 99%.

Group of orthologs #990. Best score 137 bits
Score difference with first non-orthologous sequence - A.carolinensis:137 P.jiroveci:137

H9GK39              	100.00%		L0PEC9              	100.00%
H9GQZ2              	48.00%		
Bootstrap support for H9GK39 as seed ortholog is 100%.
Bootstrap support for L0PEC9 as seed ortholog is 100%.

Group of orthologs #991. Best score 137 bits
Score difference with first non-orthologous sequence - A.carolinensis:96 P.jiroveci:137

H9GEX0              	100.00%		L0PAA1              	100.00%
Bootstrap support for H9GEX0 as seed ortholog is 100%.
Bootstrap support for L0PAA1 as seed ortholog is 100%.

Group of orthologs #992. Best score 137 bits
Score difference with first non-orthologous sequence - A.carolinensis:137 P.jiroveci:137

H9GU45              	100.00%		L0P799              	100.00%
Bootstrap support for H9GU45 as seed ortholog is 100%.
Bootstrap support for L0P799 as seed ortholog is 100%.

Group of orthologs #993. Best score 136 bits
Score difference with first non-orthologous sequence - A.carolinensis:136 P.jiroveci:136

G1KMN5              	100.00%		L0PFR0              	100.00%
Bootstrap support for G1KMN5 as seed ortholog is 100%.
Bootstrap support for L0PFR0 as seed ortholog is 100%.

Group of orthologs #994. Best score 136 bits
Score difference with first non-orthologous sequence - A.carolinensis:136 P.jiroveci:136

H9GBL9              	100.00%		L0PCP9              	100.00%
Bootstrap support for H9GBL9 as seed ortholog is 100%.
Bootstrap support for L0PCP9 as seed ortholog is 100%.

Group of orthologs #995. Best score 136 bits
Score difference with first non-orthologous sequence - A.carolinensis:136 P.jiroveci:136

H9GIH2              	100.00%		L0PC24              	100.00%
Bootstrap support for H9GIH2 as seed ortholog is 100%.
Bootstrap support for L0PC24 as seed ortholog is 100%.

Group of orthologs #996. Best score 135 bits
Score difference with first non-orthologous sequence - A.carolinensis:135 P.jiroveci:135

G1KDL4              	100.00%		L0PCA3              	100.00%
H9G8G1              	21.61%		
G1KR67              	21.34%		
Bootstrap support for G1KDL4 as seed ortholog is 100%.
Bootstrap support for L0PCA3 as seed ortholog is 100%.

Group of orthologs #997. Best score 134 bits
Score difference with first non-orthologous sequence - A.carolinensis:134 P.jiroveci:134

G1KI95              	100.00%		L0PAM9              	100.00%
H9GFQ4              	53.54%		
Bootstrap support for G1KI95 as seed ortholog is 100%.
Bootstrap support for L0PAM9 as seed ortholog is 100%.

Group of orthologs #998. Best score 134 bits
Score difference with first non-orthologous sequence - A.carolinensis:134 P.jiroveci:134

G1KNE5              	100.00%		L0P6Q5              	100.00%
H9G7H2              	55.63%		
Bootstrap support for G1KNE5 as seed ortholog is 100%.
Bootstrap support for L0P6Q5 as seed ortholog is 100%.

Group of orthologs #999. Best score 134 bits
Score difference with first non-orthologous sequence - A.carolinensis:134 P.jiroveci:134

G1KMC8              	100.00%		L0PFX0              	100.00%
H9GKX3              	53.36%		
Bootstrap support for G1KMC8 as seed ortholog is 100%.
Bootstrap support for L0PFX0 as seed ortholog is 100%.

Group of orthologs #1000. Best score 134 bits
Score difference with first non-orthologous sequence - A.carolinensis:134 P.jiroveci:134

G1K8F2              	100.00%		L0P6S2              	100.00%
Bootstrap support for G1K8F2 as seed ortholog is 100%.
Bootstrap support for L0P6S2 as seed ortholog is 100%.

Group of orthologs #1001. Best score 134 bits
Score difference with first non-orthologous sequence - A.carolinensis:134 P.jiroveci:134

G1KG18              	100.00%		L0PIT4              	100.00%
Bootstrap support for G1KG18 as seed ortholog is 100%.
Bootstrap support for L0PIT4 as seed ortholog is 100%.

Group of orthologs #1002. Best score 134 bits
Score difference with first non-orthologous sequence - A.carolinensis:134 P.jiroveci:134

H9G395              	100.00%		L0PFX5              	100.00%
Bootstrap support for H9G395 as seed ortholog is 100%.
Bootstrap support for L0PFX5 as seed ortholog is 100%.

Group of orthologs #1003. Best score 133 bits
Score difference with first non-orthologous sequence - A.carolinensis:133 P.jiroveci:133

G1KA62              	100.00%		L0P8K4              	100.00%
G1KRB1              	17.67%		
Bootstrap support for G1KA62 as seed ortholog is 100%.
Bootstrap support for L0P8K4 as seed ortholog is 100%.

Group of orthologs #1004. Best score 133 bits
Score difference with first non-orthologous sequence - A.carolinensis:25 P.jiroveci:133

G1K8E9              	100.00%		L0P963              	100.00%
Bootstrap support for G1K8E9 as seed ortholog is 65%.
Alternative seed ortholog is G1KFC3 (25 bits away from this cluster)
Bootstrap support for L0P963 as seed ortholog is 100%.

Group of orthologs #1005. Best score 133 bits
Score difference with first non-orthologous sequence - A.carolinensis:133 P.jiroveci:133

G1KD10              	100.00%		L0P9B0              	100.00%
Bootstrap support for G1KD10 as seed ortholog is 100%.
Bootstrap support for L0P9B0 as seed ortholog is 100%.

Group of orthologs #1006. Best score 133 bits
Score difference with first non-orthologous sequence - A.carolinensis:133 P.jiroveci:133

H9G663              	100.00%		L0P9F5              	100.00%
Bootstrap support for H9G663 as seed ortholog is 100%.
Bootstrap support for L0P9F5 as seed ortholog is 100%.

Group of orthologs #1007. Best score 133 bits
Score difference with first non-orthologous sequence - A.carolinensis:133 P.jiroveci:133

H9G4C6              	100.00%		L0PEV4              	100.00%
Bootstrap support for H9G4C6 as seed ortholog is 100%.
Bootstrap support for L0PEV4 as seed ortholog is 100%.

Group of orthologs #1008. Best score 133 bits
Score difference with first non-orthologous sequence - A.carolinensis:133 P.jiroveci:133

H9G6G4              	100.00%		L0PF36              	100.00%
Bootstrap support for H9G6G4 as seed ortholog is 100%.
Bootstrap support for L0PF36 as seed ortholog is 100%.

Group of orthologs #1009. Best score 132 bits
Score difference with first non-orthologous sequence - A.carolinensis:132 P.jiroveci:132

G1K8T7              	100.00%		L0PFH1              	100.00%
Bootstrap support for G1K8T7 as seed ortholog is 100%.
Bootstrap support for L0PFH1 as seed ortholog is 100%.

Group of orthologs #1010. Best score 132 bits
Score difference with first non-orthologous sequence - A.carolinensis:132 P.jiroveci:132

G1KTU3              	100.00%		L0P9B3              	100.00%
Bootstrap support for G1KTU3 as seed ortholog is 100%.
Bootstrap support for L0P9B3 as seed ortholog is 100%.

Group of orthologs #1011. Best score 132 bits
Score difference with first non-orthologous sequence - A.carolinensis:132 P.jiroveci:132

H9G5E4              	100.00%		L0PEI9              	100.00%
Bootstrap support for H9G5E4 as seed ortholog is 100%.
Bootstrap support for L0PEI9 as seed ortholog is 100%.

Group of orthologs #1012. Best score 132 bits
Score difference with first non-orthologous sequence - A.carolinensis:132 P.jiroveci:132

H9GJ90              	100.00%		L0P7A1              	100.00%
Bootstrap support for H9GJ90 as seed ortholog is 100%.
Bootstrap support for L0P7A1 as seed ortholog is 100%.

Group of orthologs #1013. Best score 132 bits
Score difference with first non-orthologous sequence - A.carolinensis:132 P.jiroveci:132

H9GIW9              	100.00%		L0P8A3              	100.00%
Bootstrap support for H9GIW9 as seed ortholog is 100%.
Bootstrap support for L0P8A3 as seed ortholog is 100%.

Group of orthologs #1014. Best score 131 bits
Score difference with first non-orthologous sequence - A.carolinensis:40 P.jiroveci:131

G1KA55              	100.00%		L0P9S9              	100.00%
G1KAF9              	50.10%		L0PDT3              	43.80%
G1KIX3              	40.15%		
G1KF79              	37.11%		
G1KAK5              	35.01%		
H9GBJ2              	23.58%		
Bootstrap support for G1KA55 as seed ortholog is 80%.
Bootstrap support for L0P9S9 as seed ortholog is 100%.

Group of orthologs #1015. Best score 131 bits
Score difference with first non-orthologous sequence - A.carolinensis:131 P.jiroveci:131

G1KKH6              	100.00%		L0PEJ6              	100.00%
Bootstrap support for G1KKH6 as seed ortholog is 100%.
Bootstrap support for L0PEJ6 as seed ortholog is 100%.

Group of orthologs #1016. Best score 131 bits
Score difference with first non-orthologous sequence - A.carolinensis:131 P.jiroveci:131

H9G4S9              	100.00%		L0PCI2              	100.00%
Bootstrap support for H9G4S9 as seed ortholog is 100%.
Bootstrap support for L0PCI2 as seed ortholog is 100%.

Group of orthologs #1017. Best score 130 bits
Score difference with first non-orthologous sequence - A.carolinensis:130 P.jiroveci:130

H9GD86              	100.00%		L0P940              	100.00%
Bootstrap support for H9GD86 as seed ortholog is 100%.
Bootstrap support for L0P940 as seed ortholog is 100%.

Group of orthologs #1018. Best score 130 bits
Score difference with first non-orthologous sequence - A.carolinensis:130 P.jiroveci:130

H9GHI2              	100.00%		L0PC08              	100.00%
Bootstrap support for H9GHI2 as seed ortholog is 100%.
Bootstrap support for L0PC08 as seed ortholog is 100%.

Group of orthologs #1019. Best score 130 bits
Score difference with first non-orthologous sequence - A.carolinensis:130 P.jiroveci:130

H9GM50              	100.00%		L0PAZ1              	100.00%
Bootstrap support for H9GM50 as seed ortholog is 100%.
Bootstrap support for L0PAZ1 as seed ortholog is 100%.

Group of orthologs #1020. Best score 129 bits
Score difference with first non-orthologous sequence - A.carolinensis:129 P.jiroveci:129

G1KBQ0              	100.00%		L0PGC9              	100.00%
G1KPR5              	80.32%		
H9GMB9              	71.81%		
Bootstrap support for G1KBQ0 as seed ortholog is 100%.
Bootstrap support for L0PGC9 as seed ortholog is 100%.

Group of orthologs #1021. Best score 129 bits
Score difference with first non-orthologous sequence - A.carolinensis:62 P.jiroveci:129

H9GB58              	100.00%		L0PD60              	100.00%
Bootstrap support for H9GB58 as seed ortholog is 84%.
Bootstrap support for L0PD60 as seed ortholog is 100%.

Group of orthologs #1022. Best score 129 bits
Score difference with first non-orthologous sequence - A.carolinensis:84 P.jiroveci:129

H9GF78              	100.00%		L0PG59              	100.00%
Bootstrap support for H9GF78 as seed ortholog is 99%.
Bootstrap support for L0PG59 as seed ortholog is 100%.

Group of orthologs #1023. Best score 128 bits
Score difference with first non-orthologous sequence - A.carolinensis:66 P.jiroveci:128

G1KEW1              	100.00%		L0PBU1              	100.00%
H9GM20              	75.12%		
Bootstrap support for G1KEW1 as seed ortholog is 99%.
Bootstrap support for L0PBU1 as seed ortholog is 100%.

Group of orthologs #1024. Best score 128 bits
Score difference with first non-orthologous sequence - A.carolinensis:128 P.jiroveci:76

G1KCW0              	100.00%		L0PD77              	100.00%
Bootstrap support for G1KCW0 as seed ortholog is 100%.
Bootstrap support for L0PD77 as seed ortholog is 98%.

Group of orthologs #1025. Best score 128 bits
Score difference with first non-orthologous sequence - A.carolinensis:128 P.jiroveci:128

G1KK62              	100.00%		L0PA35              	100.00%
Bootstrap support for G1KK62 as seed ortholog is 100%.
Bootstrap support for L0PA35 as seed ortholog is 100%.

Group of orthologs #1026. Best score 128 bits
Score difference with first non-orthologous sequence - A.carolinensis:128 P.jiroveci:128

G1KQT1              	100.00%		L0PG87              	100.00%
Bootstrap support for G1KQT1 as seed ortholog is 100%.
Bootstrap support for L0PG87 as seed ortholog is 100%.

Group of orthologs #1027. Best score 128 bits
Score difference with first non-orthologous sequence - A.carolinensis:128 P.jiroveci:128

H9GMP0              	100.00%		L0PCZ0              	100.00%
Bootstrap support for H9GMP0 as seed ortholog is 100%.
Bootstrap support for L0PCZ0 as seed ortholog is 100%.

Group of orthologs #1028. Best score 127 bits
Score difference with first non-orthologous sequence - A.carolinensis:58 P.jiroveci:69

G1KE76              	100.00%		L0P8G0              	100.00%
Bootstrap support for G1KE76 as seed ortholog is 99%.
Bootstrap support for L0P8G0 as seed ortholog is 99%.

Group of orthologs #1029. Best score 127 bits
Score difference with first non-orthologous sequence - A.carolinensis:127 P.jiroveci:127

G1KQZ8              	100.00%		L0PBR1              	100.00%
Bootstrap support for G1KQZ8 as seed ortholog is 100%.
Bootstrap support for L0PBR1 as seed ortholog is 100%.

Group of orthologs #1030. Best score 127 bits
Score difference with first non-orthologous sequence - A.carolinensis:127 P.jiroveci:127

H9G9R7              	100.00%		L0PAW7              	100.00%
Bootstrap support for H9G9R7 as seed ortholog is 100%.
Bootstrap support for L0PAW7 as seed ortholog is 100%.

Group of orthologs #1031. Best score 127 bits
Score difference with first non-orthologous sequence - A.carolinensis:127 P.jiroveci:127

H9GER7              	100.00%		L0P8W1              	100.00%
Bootstrap support for H9GER7 as seed ortholog is 100%.
Bootstrap support for L0P8W1 as seed ortholog is 100%.

Group of orthologs #1032. Best score 127 bits
Score difference with first non-orthologous sequence - A.carolinensis:127 P.jiroveci:127

H9GEV5              	100.00%		L0PFM7              	100.00%
Bootstrap support for H9GEV5 as seed ortholog is 100%.
Bootstrap support for L0PFM7 as seed ortholog is 100%.

Group of orthologs #1033. Best score 126 bits
Score difference with first non-orthologous sequence - A.carolinensis:126 P.jiroveci:126

G1KBP9              	100.00%		L0P8G3              	100.00%
G1KS32              	40.67%		
Bootstrap support for G1KBP9 as seed ortholog is 100%.
Bootstrap support for L0P8G3 as seed ortholog is 100%.

Group of orthologs #1034. Best score 126 bits
Score difference with first non-orthologous sequence - A.carolinensis:126 P.jiroveci:126

H9GLC5              	100.00%		L0PFD1              	100.00%
Bootstrap support for H9GLC5 as seed ortholog is 100%.
Bootstrap support for L0PFD1 as seed ortholog is 100%.

Group of orthologs #1035. Best score 125 bits
Score difference with first non-orthologous sequence - A.carolinensis:49 P.jiroveci:125

L7N025              	100.00%		L0P9W5              	100.00%
H9GSJ5              	72.83%		
Bootstrap support for L7N025 as seed ortholog is 85%.
Bootstrap support for L0P9W5 as seed ortholog is 100%.

Group of orthologs #1036. Best score 125 bits
Score difference with first non-orthologous sequence - A.carolinensis:125 P.jiroveci:125

H9G4Q8              	100.00%		L0PDW5              	100.00%
Bootstrap support for H9G4Q8 as seed ortholog is 100%.
Bootstrap support for L0PDW5 as seed ortholog is 100%.

Group of orthologs #1037. Best score 125 bits
Score difference with first non-orthologous sequence - A.carolinensis:125 P.jiroveci:125

H9GFJ8              	100.00%		L0PBK2              	100.00%
Bootstrap support for H9GFJ8 as seed ortholog is 100%.
Bootstrap support for L0PBK2 as seed ortholog is 100%.

Group of orthologs #1038. Best score 124 bits
Score difference with first non-orthologous sequence - A.carolinensis:124 P.jiroveci:74

G1KIA2              	100.00%		L0P990              	100.00%
G1KP71              	44.86%		
H9GGS7              	26.79%		
Bootstrap support for G1KIA2 as seed ortholog is 100%.
Bootstrap support for L0P990 as seed ortholog is 98%.

Group of orthologs #1039. Best score 124 bits
Score difference with first non-orthologous sequence - A.carolinensis:64 P.jiroveci:39

G1KA98              	100.00%		L0PFG2              	100.00%
G1KLS5              	35.55%		
Bootstrap support for G1KA98 as seed ortholog is 97%.
Bootstrap support for L0PFG2 as seed ortholog is 90%.

Group of orthologs #1040. Best score 124 bits
Score difference with first non-orthologous sequence - A.carolinensis:124 P.jiroveci:66

H9G9K2              	100.00%		L0PCC6              	100.00%
H9GAI1              	39.61%		
Bootstrap support for H9G9K2 as seed ortholog is 100%.
Bootstrap support for L0PCC6 as seed ortholog is 98%.

Group of orthologs #1041. Best score 124 bits
Score difference with first non-orthologous sequence - A.carolinensis:124 P.jiroveci:124

L7MZX1              	100.00%		L0PFZ7              	100.00%
H9GI63              	56.31%		
Bootstrap support for L7MZX1 as seed ortholog is 100%.
Bootstrap support for L0PFZ7 as seed ortholog is 100%.

Group of orthologs #1042. Best score 124 bits
Score difference with first non-orthologous sequence - A.carolinensis:124 P.jiroveci:124

G1KQW9              	100.00%		L0PB69              	100.00%
Bootstrap support for G1KQW9 as seed ortholog is 100%.
Bootstrap support for L0PB69 as seed ortholog is 100%.

Group of orthologs #1043. Best score 124 bits
Score difference with first non-orthologous sequence - A.carolinensis:124 P.jiroveci:124

H9G494              	100.00%		L0PB27              	100.00%
Bootstrap support for H9G494 as seed ortholog is 100%.
Bootstrap support for L0PB27 as seed ortholog is 100%.

Group of orthologs #1044. Best score 124 bits
Score difference with first non-orthologous sequence - A.carolinensis:124 P.jiroveci:124

H9G7B6              	100.00%		L0PBA3              	100.00%
Bootstrap support for H9G7B6 as seed ortholog is 100%.
Bootstrap support for L0PBA3 as seed ortholog is 100%.

Group of orthologs #1045. Best score 124 bits
Score difference with first non-orthologous sequence - A.carolinensis:48 P.jiroveci:72

H9GUU8              	100.00%		L0PDW3              	100.00%
Bootstrap support for H9GUU8 as seed ortholog is 97%.
Bootstrap support for L0PDW3 as seed ortholog is 99%.

Group of orthologs #1046. Best score 123 bits
Score difference with first non-orthologous sequence - A.carolinensis:123 P.jiroveci:123

G1KMC9              	100.00%		L0PC89              	100.00%
G1KUJ2              	28.08%		
G1KK15              	27.59%		
Bootstrap support for G1KMC9 as seed ortholog is 100%.
Bootstrap support for L0PC89 as seed ortholog is 100%.

Group of orthologs #1047. Best score 123 bits
Score difference with first non-orthologous sequence - A.carolinensis:123 P.jiroveci:123

G1KFM5              	100.00%		L0PDZ4              	100.00%
G1KBC9              	67.25%		
Bootstrap support for G1KFM5 as seed ortholog is 100%.
Bootstrap support for L0PDZ4 as seed ortholog is 100%.

Group of orthologs #1048. Best score 123 bits
Score difference with first non-orthologous sequence - A.carolinensis:123 P.jiroveci:123

G1KQC4              	100.00%		L0PET8              	100.00%
Bootstrap support for G1KQC4 as seed ortholog is 100%.
Bootstrap support for L0PET8 as seed ortholog is 100%.

Group of orthologs #1049. Best score 123 bits
Score difference with first non-orthologous sequence - A.carolinensis:123 P.jiroveci:123

H9G658              	100.00%		L0P795              	100.00%
Bootstrap support for H9G658 as seed ortholog is 100%.
Bootstrap support for L0P795 as seed ortholog is 100%.

Group of orthologs #1050. Best score 123 bits
Score difference with first non-orthologous sequence - A.carolinensis:123 P.jiroveci:123

H9G5U3              	100.00%		L0PD37              	100.00%
Bootstrap support for H9G5U3 as seed ortholog is 100%.
Bootstrap support for L0PD37 as seed ortholog is 100%.

Group of orthologs #1051. Best score 123 bits
Score difference with first non-orthologous sequence - A.carolinensis:123 P.jiroveci:123

H9GIF0              	100.00%		L0PDE3              	100.00%
Bootstrap support for H9GIF0 as seed ortholog is 100%.
Bootstrap support for L0PDE3 as seed ortholog is 100%.

Group of orthologs #1052. Best score 123 bits
Score difference with first non-orthologous sequence - A.carolinensis:123 P.jiroveci:123

H9GPK6              	100.00%		L0PBQ0              	100.00%
Bootstrap support for H9GPK6 as seed ortholog is 100%.
Bootstrap support for L0PBQ0 as seed ortholog is 100%.

Group of orthologs #1053. Best score 122 bits
Score difference with first non-orthologous sequence - A.carolinensis:35 P.jiroveci:122

H9GGL2              	100.00%		L0PA43              	100.00%
H9GPJ1              	35.68%		
Bootstrap support for H9GGL2 as seed ortholog is 91%.
Bootstrap support for L0PA43 as seed ortholog is 100%.

Group of orthologs #1054. Best score 122 bits
Score difference with first non-orthologous sequence - A.carolinensis:55 P.jiroveci:45

G1KDQ9              	100.00%		L0PF38              	100.00%
Bootstrap support for G1KDQ9 as seed ortholog is 97%.
Bootstrap support for L0PF38 as seed ortholog is 94%.

Group of orthologs #1055. Best score 122 bits
Score difference with first non-orthologous sequence - A.carolinensis:41 P.jiroveci:122

G1KKH8              	100.00%		L0PE76              	100.00%
Bootstrap support for G1KKH8 as seed ortholog is 92%.
Bootstrap support for L0PE76 as seed ortholog is 100%.

Group of orthologs #1056. Best score 122 bits
Score difference with first non-orthologous sequence - A.carolinensis:122 P.jiroveci:122

G1KMQ6              	100.00%		L0PFP3              	100.00%
Bootstrap support for G1KMQ6 as seed ortholog is 100%.
Bootstrap support for L0PFP3 as seed ortholog is 100%.

Group of orthologs #1057. Best score 122 bits
Score difference with first non-orthologous sequence - A.carolinensis:122 P.jiroveci:122

G1KPK3              	100.00%		L0PFV4              	100.00%
Bootstrap support for G1KPK3 as seed ortholog is 100%.
Bootstrap support for L0PFV4 as seed ortholog is 100%.

Group of orthologs #1058. Best score 122 bits
Score difference with first non-orthologous sequence - A.carolinensis:122 P.jiroveci:122

G1KRS2              	100.00%		L0PEZ7              	100.00%
Bootstrap support for G1KRS2 as seed ortholog is 100%.
Bootstrap support for L0PEZ7 as seed ortholog is 100%.

Group of orthologs #1059. Best score 122 bits
Score difference with first non-orthologous sequence - A.carolinensis:122 P.jiroveci:122

G1KRH5              	100.00%		L0PFD0              	100.00%
Bootstrap support for G1KRH5 as seed ortholog is 100%.
Bootstrap support for L0PFD0 as seed ortholog is 100%.

Group of orthologs #1060. Best score 122 bits
Score difference with first non-orthologous sequence - A.carolinensis:122 P.jiroveci:122

H9G4L1              	100.00%		L0PFZ8              	100.00%
Bootstrap support for H9G4L1 as seed ortholog is 100%.
Bootstrap support for L0PFZ8 as seed ortholog is 100%.

Group of orthologs #1061. Best score 122 bits
Score difference with first non-orthologous sequence - A.carolinensis:122 P.jiroveci:122

H9GC25              	100.00%		L0P9M3              	100.00%
Bootstrap support for H9GC25 as seed ortholog is 100%.
Bootstrap support for L0P9M3 as seed ortholog is 100%.

Group of orthologs #1062. Best score 121 bits
Score difference with first non-orthologous sequence - A.carolinensis:121 P.jiroveci:121

G1KHY8              	100.00%		L0PG76              	100.00%
                    	       		L0PE70              	58.67%
Bootstrap support for G1KHY8 as seed ortholog is 100%.
Bootstrap support for L0PG76 as seed ortholog is 100%.

Group of orthologs #1063. Best score 121 bits
Score difference with first non-orthologous sequence - A.carolinensis:121 P.jiroveci:121

G1KC93              	100.00%		L0PAK9              	100.00%
Bootstrap support for G1KC93 as seed ortholog is 100%.
Bootstrap support for L0PAK9 as seed ortholog is 100%.

Group of orthologs #1064. Best score 121 bits
Score difference with first non-orthologous sequence - A.carolinensis:121 P.jiroveci:121

G1KH95              	100.00%		L0PIR4              	100.00%
Bootstrap support for G1KH95 as seed ortholog is 100%.
Bootstrap support for L0PIR4 as seed ortholog is 100%.

Group of orthologs #1065. Best score 121 bits
Score difference with first non-orthologous sequence - A.carolinensis:34 P.jiroveci:121

H9GTX6              	100.00%		L0PGC0              	100.00%
Bootstrap support for H9GTX6 as seed ortholog is 71%.
Alternative seed ortholog is G1KHS0 (34 bits away from this cluster)
Bootstrap support for L0PGC0 as seed ortholog is 100%.

Group of orthologs #1066. Best score 120 bits
Score difference with first non-orthologous sequence - A.carolinensis:120 P.jiroveci:120

G1K8G0              	100.00%		L0PG46              	100.00%
Bootstrap support for G1K8G0 as seed ortholog is 100%.
Bootstrap support for L0PG46 as seed ortholog is 100%.

Group of orthologs #1067. Best score 120 bits
Score difference with first non-orthologous sequence - A.carolinensis:120 P.jiroveci:120

G1KDI0              	100.00%		L0PCI9              	100.00%
Bootstrap support for G1KDI0 as seed ortholog is 100%.
Bootstrap support for L0PCI9 as seed ortholog is 100%.

Group of orthologs #1068. Best score 119 bits
Score difference with first non-orthologous sequence - A.carolinensis:119 P.jiroveci:119

H9GPX5              	100.00%		L0P6Z5              	100.00%
G1KFC1              	60.66%		
H9G9U8              	43.89%		
H9GT97              	31.47%		
Bootstrap support for H9GPX5 as seed ortholog is 100%.
Bootstrap support for L0P6Z5 as seed ortholog is 100%.

Group of orthologs #1069. Best score 119 bits
Score difference with first non-orthologous sequence - A.carolinensis:119 P.jiroveci:119

G1KF24              	100.00%		L0PAF2              	100.00%
G1KHY0              	13.21%		
Bootstrap support for G1KF24 as seed ortholog is 100%.
Bootstrap support for L0PAF2 as seed ortholog is 100%.

Group of orthologs #1070. Best score 119 bits
Score difference with first non-orthologous sequence - A.carolinensis:119 P.jiroveci:119

G1K9A6              	100.00%		L0PAB2              	100.00%
Bootstrap support for G1K9A6 as seed ortholog is 100%.
Bootstrap support for L0PAB2 as seed ortholog is 100%.

Group of orthologs #1071. Best score 119 bits
Score difference with first non-orthologous sequence - A.carolinensis:10 P.jiroveci:119

G1KGJ8              	100.00%		L0P984              	100.00%
Bootstrap support for G1KGJ8 as seed ortholog is 60%.
Alternative seed ortholog is G1KUF3 (10 bits away from this cluster)
Bootstrap support for L0P984 as seed ortholog is 100%.

Group of orthologs #1072. Best score 119 bits
Score difference with first non-orthologous sequence - A.carolinensis:119 P.jiroveci:119

G1KQ81              	100.00%		L0PEZ8              	100.00%
Bootstrap support for G1KQ81 as seed ortholog is 100%.
Bootstrap support for L0PEZ8 as seed ortholog is 100%.

Group of orthologs #1073. Best score 119 bits
Score difference with first non-orthologous sequence - A.carolinensis:119 P.jiroveci:119

H9G8D2              	100.00%		L0P9T6              	100.00%
Bootstrap support for H9G8D2 as seed ortholog is 100%.
Bootstrap support for L0P9T6 as seed ortholog is 100%.

Group of orthologs #1074. Best score 119 bits
Score difference with first non-orthologous sequence - A.carolinensis:119 P.jiroveci:119

H9GP66              	100.00%		L0P9A1              	100.00%
Bootstrap support for H9GP66 as seed ortholog is 100%.
Bootstrap support for L0P9A1 as seed ortholog is 100%.

Group of orthologs #1075. Best score 118 bits
Score difference with first non-orthologous sequence - A.carolinensis:118 P.jiroveci:118

G1KNV8              	100.00%		L0P9A7              	100.00%
Bootstrap support for G1KNV8 as seed ortholog is 100%.
Bootstrap support for L0P9A7 as seed ortholog is 100%.

Group of orthologs #1076. Best score 118 bits
Score difference with first non-orthologous sequence - A.carolinensis:118 P.jiroveci:118

G1KRS9              	100.00%		L0PD00              	100.00%
Bootstrap support for G1KRS9 as seed ortholog is 100%.
Bootstrap support for L0PD00 as seed ortholog is 100%.

Group of orthologs #1077. Best score 118 bits
Score difference with first non-orthologous sequence - A.carolinensis:118 P.jiroveci:118

H9GCI9              	100.00%		L0PCY1              	100.00%
Bootstrap support for H9GCI9 as seed ortholog is 100%.
Bootstrap support for L0PCY1 as seed ortholog is 100%.

Group of orthologs #1078. Best score 118 bits
Score difference with first non-orthologous sequence - A.carolinensis:118 P.jiroveci:118

H9GNV5              	100.00%		L0PCT7              	100.00%
Bootstrap support for H9GNV5 as seed ortholog is 100%.
Bootstrap support for L0PCT7 as seed ortholog is 100%.

Group of orthologs #1079. Best score 117 bits
Score difference with first non-orthologous sequence - A.carolinensis:117 P.jiroveci:117

L7MZL4              	100.00%		L0PEP9              	100.00%
H9GPU7              	76.72%		
Bootstrap support for L7MZL4 as seed ortholog is 100%.
Bootstrap support for L0PEP9 as seed ortholog is 100%.

Group of orthologs #1080. Best score 117 bits
Score difference with first non-orthologous sequence - A.carolinensis:117 P.jiroveci:117

H9GDP0              	100.00%		L0P816              	100.00%
Bootstrap support for H9GDP0 as seed ortholog is 100%.
Bootstrap support for L0P816 as seed ortholog is 100%.

Group of orthologs #1081. Best score 117 bits
Score difference with first non-orthologous sequence - A.carolinensis:117 P.jiroveci:117

H9GGP6              	100.00%		L0PDE5              	100.00%
Bootstrap support for H9GGP6 as seed ortholog is 100%.
Bootstrap support for L0PDE5 as seed ortholog is 100%.

Group of orthologs #1082. Best score 116 bits
Score difference with first non-orthologous sequence - A.carolinensis:56 P.jiroveci:57

H9GAK1              	100.00%		L0P982              	100.00%
H9GAM3              	61.51%		
G1KG44              	32.69%		
H9GN12              	24.37%		
H9GAE6              	22.05%		
H9GGA4              	8.32%		
G1KET3              	8.32%		
G1KLQ4              	5.61%		
Bootstrap support for H9GAK1 as seed ortholog is 95%.
Bootstrap support for L0P982 as seed ortholog is 94%.

Group of orthologs #1083. Best score 116 bits
Score difference with first non-orthologous sequence - A.carolinensis:12 P.jiroveci:20

G1KRM4              	100.00%		L0P9W8              	100.00%
H9GHQ5              	79.07%		L0PH99              	63.28%
G1KB40              	12.85%		
H9GG99              	11.09%		
Bootstrap support for G1KRM4 as seed ortholog is 62%.
Alternative seed ortholog is G1KQC8 (12 bits away from this cluster)
Bootstrap support for L0P9W8 as seed ortholog is 66%.
Alternative seed ortholog is L0P8C2 (20 bits away from this cluster)

Group of orthologs #1084. Best score 116 bits
Score difference with first non-orthologous sequence - A.carolinensis:116 P.jiroveci:116

H9G9S6              	100.00%		L0PAX2              	100.00%
G1KL98              	15.20%		
Bootstrap support for H9G9S6 as seed ortholog is 100%.
Bootstrap support for L0PAX2 as seed ortholog is 100%.

Group of orthologs #1085. Best score 116 bits
Score difference with first non-orthologous sequence - A.carolinensis:116 P.jiroveci:116

G1KFU2              	100.00%		L0P9E5              	100.00%
Bootstrap support for G1KFU2 as seed ortholog is 100%.
Bootstrap support for L0P9E5 as seed ortholog is 100%.

Group of orthologs #1086. Best score 116 bits
Score difference with first non-orthologous sequence - A.carolinensis:116 P.jiroveci:116

G1KR89              	100.00%		L0PAK0              	100.00%
Bootstrap support for G1KR89 as seed ortholog is 100%.
Bootstrap support for L0PAK0 as seed ortholog is 100%.

Group of orthologs #1087. Best score 116 bits
Score difference with first non-orthologous sequence - A.carolinensis:116 P.jiroveci:116

H9GCL8              	100.00%		L0P9T1              	100.00%
Bootstrap support for H9GCL8 as seed ortholog is 100%.
Bootstrap support for L0P9T1 as seed ortholog is 100%.

Group of orthologs #1088. Best score 116 bits
Score difference with first non-orthologous sequence - A.carolinensis:116 P.jiroveci:116

H9GIQ7              	100.00%		L0PH76              	100.00%
Bootstrap support for H9GIQ7 as seed ortholog is 100%.
Bootstrap support for L0PH76 as seed ortholog is 100%.

Group of orthologs #1089. Best score 115 bits
Score difference with first non-orthologous sequence - A.carolinensis:115 P.jiroveci:115

G1KNE9              	100.00%		L0P935              	100.00%
Bootstrap support for G1KNE9 as seed ortholog is 100%.
Bootstrap support for L0P935 as seed ortholog is 100%.

Group of orthologs #1090. Best score 115 bits
Score difference with first non-orthologous sequence - A.carolinensis:115 P.jiroveci:115

H9GAB4              	100.00%		L0PHQ1              	100.00%
Bootstrap support for H9GAB4 as seed ortholog is 100%.
Bootstrap support for L0PHQ1 as seed ortholog is 100%.

Group of orthologs #1091. Best score 114 bits
Score difference with first non-orthologous sequence - A.carolinensis:40 P.jiroveci:114

G1KKE0              	100.00%		L0P8R0              	100.00%
G1KZ58              	58.78%		L0P8P3              	87.57%
G1KTV7              	52.67%		
H9G9W6              	51.15%		
G1KH67              	43.51%		
Bootstrap support for G1KKE0 as seed ortholog is 96%.
Bootstrap support for L0P8R0 as seed ortholog is 100%.

Group of orthologs #1092. Best score 114 bits
Score difference with first non-orthologous sequence - A.carolinensis:60 P.jiroveci:114

G1KTU9              	100.00%		L0P8J9              	100.00%
G1K8N3              	31.11%		
Bootstrap support for G1KTU9 as seed ortholog is 95%.
Bootstrap support for L0P8J9 as seed ortholog is 100%.

Group of orthologs #1093. Best score 114 bits
Score difference with first non-orthologous sequence - A.carolinensis:114 P.jiroveci:114

H9G5U8              	100.00%		L0PFV2              	100.00%
Bootstrap support for H9G5U8 as seed ortholog is 100%.
Bootstrap support for L0PFV2 as seed ortholog is 100%.

Group of orthologs #1094. Best score 114 bits
Score difference with first non-orthologous sequence - A.carolinensis:114 P.jiroveci:114

H9G8G5              	100.00%		L0PEH7              	100.00%
Bootstrap support for H9G8G5 as seed ortholog is 100%.
Bootstrap support for L0PEH7 as seed ortholog is 100%.

Group of orthologs #1095. Best score 114 bits
Score difference with first non-orthologous sequence - A.carolinensis:114 P.jiroveci:114

H9GCJ0              	100.00%		L0PFI5              	100.00%
Bootstrap support for H9GCJ0 as seed ortholog is 100%.
Bootstrap support for L0PFI5 as seed ortholog is 100%.

Group of orthologs #1096. Best score 114 bits
Score difference with first non-orthologous sequence - A.carolinensis:114 P.jiroveci:114

H9GP11              	100.00%		L0PBH3              	100.00%
Bootstrap support for H9GP11 as seed ortholog is 100%.
Bootstrap support for L0PBH3 as seed ortholog is 100%.

Group of orthologs #1097. Best score 113 bits
Score difference with first non-orthologous sequence - A.carolinensis:113 P.jiroveci:113

G1KKT0              	100.00%		L0PGM7              	100.00%
                    	       		L0PGY6              	94.75%
Bootstrap support for G1KKT0 as seed ortholog is 100%.
Bootstrap support for L0PGM7 as seed ortholog is 100%.

Group of orthologs #1098. Best score 113 bits
Score difference with first non-orthologous sequence - A.carolinensis:113 P.jiroveci:113

G1KR68              	100.00%		L0PBK0              	100.00%
Bootstrap support for G1KR68 as seed ortholog is 100%.
Bootstrap support for L0PBK0 as seed ortholog is 100%.

Group of orthologs #1099. Best score 113 bits
Score difference with first non-orthologous sequence - A.carolinensis:113 P.jiroveci:113

G1KU77              	100.00%		L0PG04              	100.00%
Bootstrap support for G1KU77 as seed ortholog is 100%.
Bootstrap support for L0PG04 as seed ortholog is 100%.

Group of orthologs #1100. Best score 113 bits
Score difference with first non-orthologous sequence - A.carolinensis:16 P.jiroveci:113

H9GF07              	100.00%		L0PFI7              	100.00%
Bootstrap support for H9GF07 as seed ortholog is 79%.
Bootstrap support for L0PFI7 as seed ortholog is 100%.

Group of orthologs #1101. Best score 112 bits
Score difference with first non-orthologous sequence - A.carolinensis:112 P.jiroveci:112

G1KE06              	100.00%		L0PD09              	100.00%
H9G5D0              	16.17%		
H9GEC8              	15.00%		
H9GCR6              	11.06%		
G1K9H3              	10.64%		
G1KAX1              	9.15%		
G1KK27              	9.15%		
H9G5W1              	8.72%		
H9GE12              	7.55%		
G1KMT8              	7.13%		
G1KUK3              	7.02%		
G1KL46              	6.17%		
G1KF31              	5.43%		
G1KQP7              	5.21%		
Bootstrap support for G1KE06 as seed ortholog is 100%.
Bootstrap support for L0PD09 as seed ortholog is 100%.

Group of orthologs #1102. Best score 112 bits
Score difference with first non-orthologous sequence - A.carolinensis:112 P.jiroveci:112

G1KLI6              	100.00%		L0PDL0              	100.00%
H9GIF1              	100.00%		L0PIH1              	91.63%
H9GHS7              	52.66%		
G1KGT0              	51.41%		
Bootstrap support for G1KLI6 as seed ortholog is 100%.
Bootstrap support for H9GIF1 as seed ortholog is 100%.
Bootstrap support for L0PDL0 as seed ortholog is 100%.

Group of orthologs #1103. Best score 111 bits
Score difference with first non-orthologous sequence - A.carolinensis:111 P.jiroveci:111

H9G9S5              	100.00%		L0PB30              	100.00%
G1KAF0              	49.59%		
G1KKA2              	47.31%		
G1KF11              	38.89%		
H9GKS4              	5.31%		
Bootstrap support for H9G9S5 as seed ortholog is 100%.
Bootstrap support for L0PB30 as seed ortholog is 100%.

Group of orthologs #1104. Best score 111 bits
Score difference with first non-orthologous sequence - A.carolinensis:111 P.jiroveci:111

G1KFP3              	100.00%		L0PAS5              	100.00%
G1KCY9              	23.71%		
Bootstrap support for G1KFP3 as seed ortholog is 100%.
Bootstrap support for L0PAS5 as seed ortholog is 100%.

Group of orthologs #1105. Best score 111 bits
Score difference with first non-orthologous sequence - A.carolinensis:111 P.jiroveci:111

G1KE61              	100.00%		L0PGP3              	100.00%
Bootstrap support for G1KE61 as seed ortholog is 100%.
Bootstrap support for L0PGP3 as seed ortholog is 100%.

Group of orthologs #1106. Best score 111 bits
Score difference with first non-orthologous sequence - A.carolinensis:111 P.jiroveci:111

G1KTW8              	100.00%		L0PCC2              	100.00%
Bootstrap support for G1KTW8 as seed ortholog is 100%.
Bootstrap support for L0PCC2 as seed ortholog is 100%.

Group of orthologs #1107. Best score 111 bits
Score difference with first non-orthologous sequence - A.carolinensis:111 P.jiroveci:111

G1KY22              	100.00%		L0PAT2              	100.00%
Bootstrap support for G1KY22 as seed ortholog is 100%.
Bootstrap support for L0PAT2 as seed ortholog is 100%.

Group of orthologs #1108. Best score 111 bits
Score difference with first non-orthologous sequence - A.carolinensis:111 P.jiroveci:111

H9G5J6              	100.00%		L0PCK2              	100.00%
Bootstrap support for H9G5J6 as seed ortholog is 100%.
Bootstrap support for L0PCK2 as seed ortholog is 100%.

Group of orthologs #1109. Best score 110 bits
Score difference with first non-orthologous sequence - A.carolinensis:110 P.jiroveci:110

G1KB69              	100.00%		L0PCX3              	100.00%
G1KT72              	23.46%		
H9GNE5              	23.25%		
Bootstrap support for G1KB69 as seed ortholog is 100%.
Bootstrap support for L0PCX3 as seed ortholog is 100%.

Group of orthologs #1110. Best score 110 bits
Score difference with first non-orthologous sequence - A.carolinensis:12 P.jiroveci:110

H9G7U3              	100.00%		L0PD86              	100.00%
G1K9B7              	27.87%		
Bootstrap support for H9G7U3 as seed ortholog is 71%.
Alternative seed ortholog is G1KHP3 (12 bits away from this cluster)
Bootstrap support for L0PD86 as seed ortholog is 100%.

Group of orthologs #1111. Best score 110 bits
Score difference with first non-orthologous sequence - A.carolinensis:110 P.jiroveci:110

G1KP24              	100.00%		L0PCT2              	100.00%
Bootstrap support for G1KP24 as seed ortholog is 100%.
Bootstrap support for L0PCT2 as seed ortholog is 100%.

Group of orthologs #1112. Best score 110 bits
Score difference with first non-orthologous sequence - A.carolinensis:110 P.jiroveci:110

H9G8R2              	100.00%		L0PF00              	100.00%
Bootstrap support for H9G8R2 as seed ortholog is 100%.
Bootstrap support for L0PF00 as seed ortholog is 100%.

Group of orthologs #1113. Best score 109 bits
Score difference with first non-orthologous sequence - A.carolinensis:109 P.jiroveci:109

H9G715              	100.00%		L0P7G9              	100.00%
G1KXG5              	45.73%		
Bootstrap support for H9G715 as seed ortholog is 100%.
Bootstrap support for L0P7G9 as seed ortholog is 100%.

Group of orthologs #1114. Best score 109 bits
Score difference with first non-orthologous sequence - A.carolinensis:109 P.jiroveci:109

H9G6K8              	100.00%		L0PCZ2              	100.00%
G1KW34              	42.95%		
Bootstrap support for H9G6K8 as seed ortholog is 100%.
Bootstrap support for L0PCZ2 as seed ortholog is 100%.

Group of orthologs #1115. Best score 109 bits
Score difference with first non-orthologous sequence - A.carolinensis:109 P.jiroveci:109

H9GPX6              	100.00%		L0P8T2              	100.00%
                    	       		L0PA19              	81.36%
Bootstrap support for H9GPX6 as seed ortholog is 100%.
Bootstrap support for L0P8T2 as seed ortholog is 100%.

Group of orthologs #1116. Best score 109 bits
Score difference with first non-orthologous sequence - A.carolinensis:109 P.jiroveci:109

G1KH75              	100.00%		L0PGR9              	100.00%
Bootstrap support for G1KH75 as seed ortholog is 100%.
Bootstrap support for L0PGR9 as seed ortholog is 100%.

Group of orthologs #1117. Best score 109 bits
Score difference with first non-orthologous sequence - A.carolinensis:109 P.jiroveci:109

H9G705              	100.00%		L0PHM1              	100.00%
Bootstrap support for H9G705 as seed ortholog is 100%.
Bootstrap support for L0PHM1 as seed ortholog is 100%.

Group of orthologs #1118. Best score 109 bits
Score difference with first non-orthologous sequence - A.carolinensis:109 P.jiroveci:109

H9GFK3              	100.00%		L0PF45              	100.00%
Bootstrap support for H9GFK3 as seed ortholog is 100%.
Bootstrap support for L0PF45 as seed ortholog is 100%.

Group of orthologs #1119. Best score 109 bits
Score difference with first non-orthologous sequence - A.carolinensis:109 P.jiroveci:109

H9GKA5              	100.00%		L0PDW8              	100.00%
Bootstrap support for H9GKA5 as seed ortholog is 100%.
Bootstrap support for L0PDW8 as seed ortholog is 100%.

Group of orthologs #1120. Best score 108 bits
Score difference with first non-orthologous sequence - A.carolinensis:22 P.jiroveci:108

H9GKP0              	100.00%		L0P6Z0              	100.00%
G1KMI6              	23.61%		
H9G577              	8.22%		
Bootstrap support for H9GKP0 as seed ortholog is 91%.
Bootstrap support for L0P6Z0 as seed ortholog is 100%.

Group of orthologs #1121. Best score 108 bits
Score difference with first non-orthologous sequence - A.carolinensis:108 P.jiroveci:108

G1KKK9              	100.00%		L0PAT7              	100.00%
G1KA48              	6.17%		
Bootstrap support for G1KKK9 as seed ortholog is 100%.
Bootstrap support for L0PAT7 as seed ortholog is 100%.

Group of orthologs #1122. Best score 108 bits
Score difference with first non-orthologous sequence - A.carolinensis:108 P.jiroveci:108

G1KM18              	100.00%		L0PEW9              	100.00%
Bootstrap support for G1KM18 as seed ortholog is 100%.
Bootstrap support for L0PEW9 as seed ortholog is 100%.

Group of orthologs #1123. Best score 108 bits
Score difference with first non-orthologous sequence - A.carolinensis:108 P.jiroveci:108

H9G9P3              	100.00%		L0P7T7              	100.00%
Bootstrap support for H9G9P3 as seed ortholog is 100%.
Bootstrap support for L0P7T7 as seed ortholog is 100%.

Group of orthologs #1124. Best score 108 bits
Score difference with first non-orthologous sequence - A.carolinensis:108 P.jiroveci:108

H9GB70              	100.00%		L0PFF4              	100.00%
Bootstrap support for H9GB70 as seed ortholog is 100%.
Bootstrap support for L0PFF4 as seed ortholog is 100%.

Group of orthologs #1125. Best score 106 bits
Score difference with first non-orthologous sequence - A.carolinensis:37 P.jiroveci:50

G1KJ89              	100.00%		L0PBE1              	100.00%
G1KJ18              	93.52%		
H9G4Y2              	34.41%		
H9GM47              	32.39%		
H9G622              	31.58%		
H9GTS2              	15.79%		
H9GSI5              	11.74%		
Bootstrap support for G1KJ89 as seed ortholog is 97%.
Bootstrap support for L0PBE1 as seed ortholog is 99%.

Group of orthologs #1126. Best score 106 bits
Score difference with first non-orthologous sequence - A.carolinensis:106 P.jiroveci:106

G1KNC7              	100.00%		L0PDI3              	100.00%
Bootstrap support for G1KNC7 as seed ortholog is 100%.
Bootstrap support for L0PDI3 as seed ortholog is 100%.

Group of orthologs #1127. Best score 106 bits
Score difference with first non-orthologous sequence - A.carolinensis:106 P.jiroveci:106

H9GA96              	100.00%		L0PB99              	100.00%
Bootstrap support for H9GA96 as seed ortholog is 100%.
Bootstrap support for L0PB99 as seed ortholog is 100%.

Group of orthologs #1128. Best score 106 bits
Score difference with first non-orthologous sequence - A.carolinensis:7 P.jiroveci:106

H9GFE5              	100.00%		L0PCM4              	100.00%
Bootstrap support for H9GFE5 as seed ortholog is 73%.
Alternative seed ortholog is G1KHD9 (7 bits away from this cluster)
Bootstrap support for L0PCM4 as seed ortholog is 100%.

Group of orthologs #1129. Best score 105 bits
Score difference with first non-orthologous sequence - A.carolinensis:105 P.jiroveci:38

G1K8N5              	100.00%		L0P9Q9              	100.00%
H9GB24              	65.21%		
G1KF27              	19.59%		
G1KFY5              	16.75%		
Bootstrap support for G1K8N5 as seed ortholog is 100%.
Bootstrap support for L0P9Q9 as seed ortholog is 88%.

Group of orthologs #1130. Best score 105 bits
Score difference with first non-orthologous sequence - A.carolinensis:105 P.jiroveci:105

G1KJN1              	100.00%		L0P9Z6              	100.00%
Bootstrap support for G1KJN1 as seed ortholog is 100%.
Bootstrap support for L0P9Z6 as seed ortholog is 100%.

Group of orthologs #1131. Best score 105 bits
Score difference with first non-orthologous sequence - A.carolinensis:56 P.jiroveci:105

G1KKW4              	100.00%		L0PEE1              	100.00%
Bootstrap support for G1KKW4 as seed ortholog is 99%.
Bootstrap support for L0PEE1 as seed ortholog is 100%.

Group of orthologs #1132. Best score 105 bits
Score difference with first non-orthologous sequence - A.carolinensis:105 P.jiroveci:105

H9G6Y6              	100.00%		L0PEV6              	100.00%
Bootstrap support for H9G6Y6 as seed ortholog is 100%.
Bootstrap support for L0PEV6 as seed ortholog is 100%.

Group of orthologs #1133. Best score 105 bits
Score difference with first non-orthologous sequence - A.carolinensis:55 P.jiroveci:105

H9GMN1              	100.00%		L0PE14              	100.00%
Bootstrap support for H9GMN1 as seed ortholog is 99%.
Bootstrap support for L0PE14 as seed ortholog is 100%.

Group of orthologs #1134. Best score 104 bits
Score difference with first non-orthologous sequence - A.carolinensis:104 P.jiroveci:104

G1KNT9              	100.00%		L0P7Q2              	100.00%
H9GDP1              	56.55%		
Bootstrap support for G1KNT9 as seed ortholog is 100%.
Bootstrap support for L0P7Q2 as seed ortholog is 100%.

Group of orthologs #1135. Best score 104 bits
Score difference with first non-orthologous sequence - A.carolinensis:104 P.jiroveci:104

G1KI50              	100.00%		L0PF86              	100.00%
                    	       		L0PC10              	85.65%
Bootstrap support for G1KI50 as seed ortholog is 100%.
Bootstrap support for L0PF86 as seed ortholog is 100%.

Group of orthologs #1136. Best score 104 bits
Score difference with first non-orthologous sequence - A.carolinensis:104 P.jiroveci:104

G1KVU8              	100.00%		L0PHI8              	100.00%
Bootstrap support for G1KVU8 as seed ortholog is 100%.
Bootstrap support for L0PHI8 as seed ortholog is 100%.

Group of orthologs #1137. Best score 103 bits
Score difference with first non-orthologous sequence - A.carolinensis:103 P.jiroveci:103

H9GJP2              	100.00%		L0PDP1              	100.00%
                    	       		L0PFL7              	55.94%
Bootstrap support for H9GJP2 as seed ortholog is 100%.
Bootstrap support for L0PDP1 as seed ortholog is 100%.

Group of orthologs #1138. Best score 103 bits
Score difference with first non-orthologous sequence - A.carolinensis:103 P.jiroveci:103

G1K8V5              	100.00%		L0PGF4              	100.00%
Bootstrap support for G1K8V5 as seed ortholog is 100%.
Bootstrap support for L0PGF4 as seed ortholog is 100%.

Group of orthologs #1139. Best score 103 bits
Score difference with first non-orthologous sequence - A.carolinensis:103 P.jiroveci:103

G1KS87              	100.00%		L0PDM8              	100.00%
Bootstrap support for G1KS87 as seed ortholog is 100%.
Bootstrap support for L0PDM8 as seed ortholog is 100%.

Group of orthologs #1140. Best score 103 bits
Score difference with first non-orthologous sequence - A.carolinensis:103 P.jiroveci:103

H9GCW7              	100.00%		L0PCX8              	100.00%
Bootstrap support for H9GCW7 as seed ortholog is 100%.
Bootstrap support for L0PCX8 as seed ortholog is 100%.

Group of orthologs #1141. Best score 102 bits
Score difference with first non-orthologous sequence - A.carolinensis:102 P.jiroveci:102

G1KK22              	100.00%		L0PCV9              	100.00%
Bootstrap support for G1KK22 as seed ortholog is 100%.
Bootstrap support for L0PCV9 as seed ortholog is 100%.

Group of orthologs #1142. Best score 102 bits
Score difference with first non-orthologous sequence - A.carolinensis:102 P.jiroveci:102

H9G8X9              	100.00%		L0P8Q1              	100.00%
Bootstrap support for H9G8X9 as seed ortholog is 100%.
Bootstrap support for L0P8Q1 as seed ortholog is 100%.

Group of orthologs #1143. Best score 102 bits
Score difference with first non-orthologous sequence - A.carolinensis:102 P.jiroveci:102

H9GKI1              	100.00%		L0PFT4              	100.00%
Bootstrap support for H9GKI1 as seed ortholog is 100%.
Bootstrap support for L0PFT4 as seed ortholog is 100%.

Group of orthologs #1144. Best score 101 bits
Score difference with first non-orthologous sequence - A.carolinensis:101 P.jiroveci:101

H9G479              	100.00%		L0PF90              	100.00%
G1KP07              	53.73%		
H9GLC2              	49.24%		
Bootstrap support for H9G479 as seed ortholog is 100%.
Bootstrap support for L0PF90 as seed ortholog is 100%.

Group of orthologs #1145. Best score 101 bits
Score difference with first non-orthologous sequence - A.carolinensis:101 P.jiroveci:101

H9G5X2              	100.00%		L0P8J6              	100.00%
Bootstrap support for H9G5X2 as seed ortholog is 100%.
Bootstrap support for L0P8J6 as seed ortholog is 100%.

Group of orthologs #1146. Best score 101 bits
Score difference with first non-orthologous sequence - A.carolinensis:101 P.jiroveci:101

H9G8R1              	100.00%		L0PAM7              	100.00%
Bootstrap support for H9G8R1 as seed ortholog is 100%.
Bootstrap support for L0PAM7 as seed ortholog is 100%.

Group of orthologs #1147. Best score 100 bits
Score difference with first non-orthologous sequence - A.carolinensis:100 P.jiroveci:100

G1KJH1              	100.00%		L0PBQ7              	100.00%
H9GCS2              	49.67%		
H9GKS8              	45.23%		
H9GCM4              	23.28%		
G1KH73              	8.65%		
G1K8L2              	8.20%		
H9GSV7              	6.21%		
Bootstrap support for G1KJH1 as seed ortholog is 100%.
Bootstrap support for L0PBQ7 as seed ortholog is 100%.

Group of orthologs #1148. Best score 100 bits
Score difference with first non-orthologous sequence - A.carolinensis:100 P.jiroveci:100

H9G7V6              	100.00%		L0PC19              	100.00%
G1K9N0              	38.58%		
Bootstrap support for H9G7V6 as seed ortholog is 100%.
Bootstrap support for L0PC19 as seed ortholog is 100%.

Group of orthologs #1149. Best score 100 bits
Score difference with first non-orthologous sequence - A.carolinensis:100 P.jiroveci:100

G1KLC2              	100.00%		L0PD96              	100.00%
Bootstrap support for G1KLC2 as seed ortholog is 100%.
Bootstrap support for L0PD96 as seed ortholog is 100%.

Group of orthologs #1150. Best score 100 bits
Score difference with first non-orthologous sequence - A.carolinensis:4 P.jiroveci:100

G1KMK6              	100.00%		L0PFE9              	100.00%
Bootstrap support for G1KMK6 as seed ortholog is 49%.
Alternative seed ortholog is H9GJC2 (4 bits away from this cluster)
Bootstrap support for L0PFE9 as seed ortholog is 100%.

Group of orthologs #1151. Best score 100 bits
Score difference with first non-orthologous sequence - A.carolinensis:100 P.jiroveci:100

H9GDT8              	100.00%		L0P9X3              	100.00%
Bootstrap support for H9GDT8 as seed ortholog is 100%.
Bootstrap support for L0P9X3 as seed ortholog is 100%.

Group of orthologs #1152. Best score 99 bits
Score difference with first non-orthologous sequence - A.carolinensis:99 P.jiroveci:99

G1KI28              	100.00%		L0PC01              	100.00%
G1KEN8              	46.76%		
G1KHX7              	11.30%		
Bootstrap support for G1KI28 as seed ortholog is 100%.
Bootstrap support for L0PC01 as seed ortholog is 100%.

Group of orthologs #1153. Best score 99 bits
Score difference with first non-orthologous sequence - A.carolinensis:99 P.jiroveci:99

G1K9K8              	100.00%		L0P7W8              	100.00%
                    	       		L0P8R2              	100.00%
Bootstrap support for G1K9K8 as seed ortholog is 100%.
Bootstrap support for L0P7W8 as seed ortholog is 100%.
Bootstrap support for L0P8R2 as seed ortholog is 100%.

Group of orthologs #1154. Best score 99 bits
Score difference with first non-orthologous sequence - A.carolinensis:99 P.jiroveci:99

H9G7M2              	100.00%		L0PHH5              	100.00%
G1KC75              	18.75%		
Bootstrap support for H9G7M2 as seed ortholog is 100%.
Bootstrap support for L0PHH5 as seed ortholog is 100%.

Group of orthologs #1155. Best score 99 bits
Score difference with first non-orthologous sequence - A.carolinensis:99 P.jiroveci:99

H9GHW1              	100.00%		L0PHJ8              	100.00%
                    	       		L0P888              	60.31%
Bootstrap support for H9GHW1 as seed ortholog is 100%.
Bootstrap support for L0PHJ8 as seed ortholog is 100%.

Group of orthologs #1156. Best score 99 bits
Score difference with first non-orthologous sequence - A.carolinensis:99 P.jiroveci:99

G1KFV3              	100.00%		L0PAN5              	100.00%
Bootstrap support for G1KFV3 as seed ortholog is 100%.
Bootstrap support for L0PAN5 as seed ortholog is 100%.

Group of orthologs #1157. Best score 99 bits
Score difference with first non-orthologous sequence - A.carolinensis:30 P.jiroveci:99

G1KNN6              	100.00%		L0PDX9              	100.00%
Bootstrap support for G1KNN6 as seed ortholog is 78%.
Bootstrap support for L0PDX9 as seed ortholog is 100%.

Group of orthologs #1158. Best score 99 bits
Score difference with first non-orthologous sequence - A.carolinensis:99 P.jiroveci:99

H9GAX5              	100.00%		L0PA96              	100.00%
Bootstrap support for H9GAX5 as seed ortholog is 100%.
Bootstrap support for L0PA96 as seed ortholog is 100%.

Group of orthologs #1159. Best score 98 bits
Score difference with first non-orthologous sequence - A.carolinensis:15 P.jiroveci:98

G1KLB9              	100.00%		L0PBU9              	100.00%
H9GDR0              	31.50%		
Bootstrap support for G1KLB9 as seed ortholog is 80%.
Bootstrap support for L0PBU9 as seed ortholog is 100%.

Group of orthologs #1160. Best score 98 bits
Score difference with first non-orthologous sequence - A.carolinensis:98 P.jiroveci:98

G1KP46              	100.00%		L0PBX3              	100.00%
Bootstrap support for G1KP46 as seed ortholog is 100%.
Bootstrap support for L0PBX3 as seed ortholog is 100%.

Group of orthologs #1161. Best score 98 bits
Score difference with first non-orthologous sequence - A.carolinensis:98 P.jiroveci:98

H9GPP3              	100.00%		L0P7Y1              	100.00%
Bootstrap support for H9GPP3 as seed ortholog is 100%.
Bootstrap support for L0P7Y1 as seed ortholog is 100%.

Group of orthologs #1162. Best score 97 bits
Score difference with first non-orthologous sequence - A.carolinensis:97 P.jiroveci:97

G1KB43              	100.00%		L0PGZ1              	100.00%
                    	       		L0PGM3              	86.80%
Bootstrap support for G1KB43 as seed ortholog is 100%.
Bootstrap support for L0PGZ1 as seed ortholog is 100%.

Group of orthologs #1163. Best score 97 bits
Score difference with first non-orthologous sequence - A.carolinensis:97 P.jiroveci:97

G1KFG8              	100.00%		L0PDY4              	100.00%
H9GBI1              	46.69%		
Bootstrap support for G1KFG8 as seed ortholog is 100%.
Bootstrap support for L0PDY4 as seed ortholog is 100%.

Group of orthologs #1164. Best score 97 bits
Score difference with first non-orthologous sequence - A.carolinensis:97 P.jiroveci:97

G1KGP4              	100.00%		L0PFR7              	100.00%
H9G8W7              	5.77%		
Bootstrap support for G1KGP4 as seed ortholog is 100%.
Bootstrap support for L0PFR7 as seed ortholog is 100%.

Group of orthologs #1165. Best score 97 bits
Score difference with first non-orthologous sequence - A.carolinensis:97 P.jiroveci:97

G1KTA0              	100.00%		L0PE10              	100.00%
H9GG23              	56.52%		
Bootstrap support for G1KTA0 as seed ortholog is 100%.
Bootstrap support for L0PE10 as seed ortholog is 100%.

Group of orthologs #1166. Best score 97 bits
Score difference with first non-orthologous sequence - A.carolinensis:43 P.jiroveci:97

G1KPF7              	100.00%		L0PFA1              	100.00%
Bootstrap support for G1KPF7 as seed ortholog is 99%.
Bootstrap support for L0PFA1 as seed ortholog is 100%.

Group of orthologs #1167. Best score 96 bits
Score difference with first non-orthologous sequence - A.carolinensis:96 P.jiroveci:96

G1KAL1              	100.00%		L0PDN8              	100.00%
G1KT13              	5.58%		
Bootstrap support for G1KAL1 as seed ortholog is 100%.
Bootstrap support for L0PDN8 as seed ortholog is 100%.

Group of orthologs #1168. Best score 96 bits
Score difference with first non-orthologous sequence - A.carolinensis:47 P.jiroveci:96

G1KHK3              	100.00%		L0PB42              	100.00%
G1KF49              	87.88%		
Bootstrap support for G1KHK3 as seed ortholog is 99%.
Bootstrap support for L0PB42 as seed ortholog is 100%.

Group of orthologs #1169. Best score 96 bits
Score difference with first non-orthologous sequence - A.carolinensis:40 P.jiroveci:96

G1KNB9              	100.00%		L0P9D3              	100.00%
                    	       		L0P7B2              	60.34%
Bootstrap support for G1KNB9 as seed ortholog is 76%.
Bootstrap support for L0P9D3 as seed ortholog is 100%.

Group of orthologs #1170. Best score 96 bits
Score difference with first non-orthologous sequence - A.carolinensis:27 P.jiroveci:96

H9GM90              	100.00%		L0PDF0              	100.00%
H9GDD3              	9.09%		
Bootstrap support for H9GM90 as seed ortholog is 78%.
Bootstrap support for L0PDF0 as seed ortholog is 100%.

Group of orthologs #1171. Best score 96 bits
Score difference with first non-orthologous sequence - A.carolinensis:96 P.jiroveci:96

G1KDM8              	100.00%		L0PEA3              	100.00%
Bootstrap support for G1KDM8 as seed ortholog is 100%.
Bootstrap support for L0PEA3 as seed ortholog is 100%.

Group of orthologs #1172. Best score 96 bits
Score difference with first non-orthologous sequence - A.carolinensis:96 P.jiroveci:96

G1KL30              	100.00%		L0P746              	100.00%
Bootstrap support for G1KL30 as seed ortholog is 100%.
Bootstrap support for L0P746 as seed ortholog is 100%.

Group of orthologs #1173. Best score 96 bits
Score difference with first non-orthologous sequence - A.carolinensis:96 P.jiroveci:96

G1KSM7              	100.00%		L0PBZ3              	100.00%
Bootstrap support for G1KSM7 as seed ortholog is 100%.
Bootstrap support for L0PBZ3 as seed ortholog is 100%.

Group of orthologs #1174. Best score 96 bits
Score difference with first non-orthologous sequence - A.carolinensis:96 P.jiroveci:96

H9GVB3              	100.00%		L0P8M5              	100.00%
Bootstrap support for H9GVB3 as seed ortholog is 100%.
Bootstrap support for L0P8M5 as seed ortholog is 100%.

Group of orthologs #1175. Best score 95 bits
Score difference with first non-orthologous sequence - A.carolinensis:95 P.jiroveci:33

G1KC38              	100.00%		L0PB92              	100.00%
G1K9I2              	40.24%		
Bootstrap support for G1KC38 as seed ortholog is 100%.
Bootstrap support for L0PB92 as seed ortholog is 88%.

Group of orthologs #1176. Best score 95 bits
Score difference with first non-orthologous sequence - A.carolinensis:95 P.jiroveci:95

G1KAW1              	100.00%		L0PFB0              	100.00%
Bootstrap support for G1KAW1 as seed ortholog is 100%.
Bootstrap support for L0PFB0 as seed ortholog is 100%.

Group of orthologs #1177. Best score 95 bits
Score difference with first non-orthologous sequence - A.carolinensis:36 P.jiroveci:24

G1KL17              	100.00%		L0PEK0              	100.00%
Bootstrap support for G1KL17 as seed ortholog is 93%.
Bootstrap support for L0PEK0 as seed ortholog is 85%.

Group of orthologs #1178. Best score 95 bits
Score difference with first non-orthologous sequence - A.carolinensis:95 P.jiroveci:95

H9G413              	100.00%		L0P868              	100.00%
Bootstrap support for H9G413 as seed ortholog is 100%.
Bootstrap support for L0P868 as seed ortholog is 100%.

Group of orthologs #1179. Best score 95 bits
Score difference with first non-orthologous sequence - A.carolinensis:95 P.jiroveci:95

H9G839              	100.00%		L0P8A1              	100.00%
Bootstrap support for H9G839 as seed ortholog is 100%.
Bootstrap support for L0P8A1 as seed ortholog is 100%.

Group of orthologs #1180. Best score 95 bits
Score difference with first non-orthologous sequence - A.carolinensis:95 P.jiroveci:95

H9G6I4              	100.00%		L0PG13              	100.00%
Bootstrap support for H9G6I4 as seed ortholog is 100%.
Bootstrap support for L0PG13 as seed ortholog is 100%.

Group of orthologs #1181. Best score 95 bits
Score difference with first non-orthologous sequence - A.carolinensis:95 P.jiroveci:95

H9GMV2              	100.00%		L0PFT3              	100.00%
Bootstrap support for H9GMV2 as seed ortholog is 100%.
Bootstrap support for L0PFT3 as seed ortholog is 100%.

Group of orthologs #1182. Best score 94 bits
Score difference with first non-orthologous sequence - A.carolinensis:15 P.jiroveci:94

G1KHL4              	100.00%		L0PF58              	100.00%
G1KR26              	100.00%		
Bootstrap support for G1KHL4 as seed ortholog is 72%.
Alternative seed ortholog is G1KHK8 (15 bits away from this cluster)
Bootstrap support for G1KR26 as seed ortholog is 68%.
Alternative seed ortholog is G1KHK8 (15 bits away from this cluster)
Bootstrap support for L0PF58 as seed ortholog is 100%.

Group of orthologs #1183. Best score 94 bits
Score difference with first non-orthologous sequence - A.carolinensis:94 P.jiroveci:94

H9G653              	100.00%		L0PAD6              	100.00%
G1KSV1              	33.21%		
Bootstrap support for H9G653 as seed ortholog is 100%.
Bootstrap support for L0PAD6 as seed ortholog is 100%.

Group of orthologs #1184. Best score 94 bits
Score difference with first non-orthologous sequence - A.carolinensis:94 P.jiroveci:94

G1K8D7              	100.00%		L0P9H0              	100.00%
Bootstrap support for G1K8D7 as seed ortholog is 100%.
Bootstrap support for L0P9H0 as seed ortholog is 100%.

Group of orthologs #1185. Best score 94 bits
Score difference with first non-orthologous sequence - A.carolinensis:94 P.jiroveci:94

G1KAA5              	100.00%		L0PH07              	100.00%
Bootstrap support for G1KAA5 as seed ortholog is 100%.
Bootstrap support for L0PH07 as seed ortholog is 100%.

Group of orthologs #1186. Best score 94 bits
Score difference with first non-orthologous sequence - A.carolinensis:94 P.jiroveci:94

G1KJT3              	100.00%		L0PF82              	100.00%
Bootstrap support for G1KJT3 as seed ortholog is 100%.
Bootstrap support for L0PF82 as seed ortholog is 100%.

Group of orthologs #1187. Best score 94 bits
Score difference with first non-orthologous sequence - A.carolinensis:94 P.jiroveci:94

G1KWE9              	100.00%		L0PDQ8              	100.00%
Bootstrap support for G1KWE9 as seed ortholog is 100%.
Bootstrap support for L0PDQ8 as seed ortholog is 100%.

Group of orthologs #1188. Best score 94 bits
Score difference with first non-orthologous sequence - A.carolinensis:94 P.jiroveci:94

H9G5Z9              	100.00%		L0PBK9              	100.00%
Bootstrap support for H9G5Z9 as seed ortholog is 100%.
Bootstrap support for L0PBK9 as seed ortholog is 100%.

Group of orthologs #1189. Best score 94 bits
Score difference with first non-orthologous sequence - A.carolinensis:24 P.jiroveci:94

H9GJI5              	100.00%		L0P9W7              	100.00%
Bootstrap support for H9GJI5 as seed ortholog is 88%.
Bootstrap support for L0P9W7 as seed ortholog is 100%.

Group of orthologs #1190. Best score 94 bits
Score difference with first non-orthologous sequence - A.carolinensis:94 P.jiroveci:94

H9GMW6              	100.00%		L0PAT4              	100.00%
Bootstrap support for H9GMW6 as seed ortholog is 100%.
Bootstrap support for L0PAT4 as seed ortholog is 100%.

Group of orthologs #1191. Best score 93 bits
Score difference with first non-orthologous sequence - A.carolinensis:93 P.jiroveci:93

G1KF61              	100.00%		L0PBD3              	100.00%
G1KB70              	50.52%		
H9G537              	42.32%		
Bootstrap support for G1KF61 as seed ortholog is 100%.
Bootstrap support for L0PBD3 as seed ortholog is 100%.

Group of orthologs #1192. Best score 93 bits
Score difference with first non-orthologous sequence - A.carolinensis:50 P.jiroveci:93

H9GG34              	100.00%		L0PF67              	100.00%
G1KU90              	34.88%		
Bootstrap support for H9GG34 as seed ortholog is 94%.
Bootstrap support for L0PF67 as seed ortholog is 100%.

Group of orthologs #1193. Best score 93 bits
Score difference with first non-orthologous sequence - A.carolinensis:93 P.jiroveci:93

G1KGZ9              	100.00%		L0P995              	100.00%
Bootstrap support for G1KGZ9 as seed ortholog is 100%.
Bootstrap support for L0P995 as seed ortholog is 100%.

Group of orthologs #1194. Best score 93 bits
Score difference with first non-orthologous sequence - A.carolinensis:93 P.jiroveci:93

G1KEH0              	100.00%		L0PI42              	100.00%
Bootstrap support for G1KEH0 as seed ortholog is 100%.
Bootstrap support for L0PI42 as seed ortholog is 100%.

Group of orthologs #1195. Best score 93 bits
Score difference with first non-orthologous sequence - A.carolinensis:93 P.jiroveci:93

H9G8B1              	100.00%		L0PFG8              	100.00%
Bootstrap support for H9G8B1 as seed ortholog is 100%.
Bootstrap support for L0PFG8 as seed ortholog is 100%.

Group of orthologs #1196. Best score 93 bits
Score difference with first non-orthologous sequence - A.carolinensis:93 P.jiroveci:93

H9GPG0              	100.00%		L0PFT5              	100.00%
Bootstrap support for H9GPG0 as seed ortholog is 100%.
Bootstrap support for L0PFT5 as seed ortholog is 100%.

Group of orthologs #1197. Best score 92 bits
Score difference with first non-orthologous sequence - A.carolinensis:92 P.jiroveci:92

H9G804              	100.00%		L0P8Y9              	100.00%
H9GLH1              	44.58%		
Bootstrap support for H9G804 as seed ortholog is 100%.
Bootstrap support for L0P8Y9 as seed ortholog is 100%.

Group of orthologs #1198. Best score 92 bits
Score difference with first non-orthologous sequence - A.carolinensis:92 P.jiroveci:92

H9GEZ5              	100.00%		L0PBP6              	100.00%
                    	       		L0PHL6              	91.41%
Bootstrap support for H9GEZ5 as seed ortholog is 100%.
Bootstrap support for L0PBP6 as seed ortholog is 100%.

Group of orthologs #1199. Best score 92 bits
Score difference with first non-orthologous sequence - A.carolinensis:36 P.jiroveci:92

G1KDX4              	100.00%		L0PEF8              	100.00%
Bootstrap support for G1KDX4 as seed ortholog is 83%.
Bootstrap support for L0PEF8 as seed ortholog is 100%.

Group of orthologs #1200. Best score 92 bits
Score difference with first non-orthologous sequence - A.carolinensis:92 P.jiroveci:92

G1KTQ1              	100.00%		L0PAK5              	100.00%
Bootstrap support for G1KTQ1 as seed ortholog is 100%.
Bootstrap support for L0PAK5 as seed ortholog is 100%.

Group of orthologs #1201. Best score 92 bits
Score difference with first non-orthologous sequence - A.carolinensis:92 P.jiroveci:92

H9GCA8              	100.00%		L0P7D7              	100.00%
Bootstrap support for H9GCA8 as seed ortholog is 100%.
Bootstrap support for L0P7D7 as seed ortholog is 100%.

Group of orthologs #1202. Best score 91 bits
Score difference with first non-orthologous sequence - A.carolinensis:91 P.jiroveci:91

G1KCB9              	100.00%		L0PFK1              	100.00%
G1KA36              	38.64%		
Bootstrap support for G1KCB9 as seed ortholog is 100%.
Bootstrap support for L0PFK1 as seed ortholog is 100%.

Group of orthologs #1203. Best score 91 bits
Score difference with first non-orthologous sequence - A.carolinensis:91 P.jiroveci:91

G1KSS8              	100.00%		L0PDD4              	100.00%
H9GMQ3              	55.95%		
Bootstrap support for G1KSS8 as seed ortholog is 100%.
Bootstrap support for L0PDD4 as seed ortholog is 100%.

Group of orthologs #1204. Best score 91 bits
Score difference with first non-orthologous sequence - A.carolinensis:91 P.jiroveci:91

H9GEP0              	100.00%		L0P847              	100.00%
H9GN74              	49.46%		
Bootstrap support for H9GEP0 as seed ortholog is 100%.
Bootstrap support for L0P847 as seed ortholog is 100%.

Group of orthologs #1205. Best score 91 bits
Score difference with first non-orthologous sequence - A.carolinensis:91 P.jiroveci:91

H9GEQ5              	100.00%		L0PAV4              	100.00%
Bootstrap support for H9GEQ5 as seed ortholog is 100%.
Bootstrap support for L0PAV4 as seed ortholog is 100%.

Group of orthologs #1206. Best score 91 bits
Score difference with first non-orthologous sequence - A.carolinensis:91 P.jiroveci:91

H9GM13              	100.00%		L0PF64              	100.00%
Bootstrap support for H9GM13 as seed ortholog is 100%.
Bootstrap support for L0PF64 as seed ortholog is 100%.

Group of orthologs #1207. Best score 90 bits
Score difference with first non-orthologous sequence - A.carolinensis:90 P.jiroveci:90

G1KFS5              	100.00%		L0PG18              	100.00%
H9GJQ3              	58.38%		
Bootstrap support for G1KFS5 as seed ortholog is 100%.
Bootstrap support for L0PG18 as seed ortholog is 100%.

Group of orthologs #1208. Best score 90 bits
Score difference with first non-orthologous sequence - A.carolinensis:25 P.jiroveci:90

H9GFQ3              	100.00%		L0PD48              	100.00%
G1KEK9              	43.07%		
Bootstrap support for H9GFQ3 as seed ortholog is 82%.
Bootstrap support for L0PD48 as seed ortholog is 100%.

Group of orthologs #1209. Best score 90 bits
Score difference with first non-orthologous sequence - A.carolinensis:90 P.jiroveci:90

G1K981              	100.00%		L0PII9              	100.00%
Bootstrap support for G1K981 as seed ortholog is 100%.
Bootstrap support for L0PII9 as seed ortholog is 100%.

Group of orthologs #1210. Best score 90 bits
Score difference with first non-orthologous sequence - A.carolinensis:90 P.jiroveci:90

G1KPB9              	100.00%		L0PFN7              	100.00%
Bootstrap support for G1KPB9 as seed ortholog is 100%.
Bootstrap support for L0PFN7 as seed ortholog is 100%.

Group of orthologs #1211. Best score 90 bits
Score difference with first non-orthologous sequence - A.carolinensis:90 P.jiroveci:90

H9GBX1              	100.00%		L0PCF7              	100.00%
Bootstrap support for H9GBX1 as seed ortholog is 100%.
Bootstrap support for L0PCF7 as seed ortholog is 100%.

Group of orthologs #1212. Best score 90 bits
Score difference with first non-orthologous sequence - A.carolinensis:90 P.jiroveci:90

H9GLK3              	100.00%		L0PEL9              	100.00%
Bootstrap support for H9GLK3 as seed ortholog is 100%.
Bootstrap support for L0PEL9 as seed ortholog is 100%.

Group of orthologs #1213. Best score 89 bits
Score difference with first non-orthologous sequence - A.carolinensis:89 P.jiroveci:89

H9G7S4              	100.00%		L0PCM3              	100.00%
Bootstrap support for H9G7S4 as seed ortholog is 100%.
Bootstrap support for L0PCM3 as seed ortholog is 100%.

Group of orthologs #1214. Best score 89 bits
Score difference with first non-orthologous sequence - A.carolinensis:89 P.jiroveci:89

H9GAL2              	100.00%		L0PEI6              	100.00%
Bootstrap support for H9GAL2 as seed ortholog is 100%.
Bootstrap support for L0PEI6 as seed ortholog is 100%.

Group of orthologs #1215. Best score 89 bits
Score difference with first non-orthologous sequence - A.carolinensis:89 P.jiroveci:33

H9GD61              	100.00%		L0PCQ5              	100.00%
Bootstrap support for H9GD61 as seed ortholog is 100%.
Bootstrap support for L0PCQ5 as seed ortholog is 98%.

Group of orthologs #1216. Best score 88 bits
Score difference with first non-orthologous sequence - A.carolinensis:13 P.jiroveci:88

G1KE58              	100.00%		L0P8W8              	100.00%
                    	       		L0P9K5              	55.56%
Bootstrap support for G1KE58 as seed ortholog is 68%.
Alternative seed ortholog is H9GND7 (13 bits away from this cluster)
Bootstrap support for L0P8W8 as seed ortholog is 100%.

Group of orthologs #1217. Best score 88 bits
Score difference with first non-orthologous sequence - A.carolinensis:88 P.jiroveci:88

H9G5L0              	100.00%		L0PG56              	100.00%
Bootstrap support for H9G5L0 as seed ortholog is 100%.
Bootstrap support for L0PG56 as seed ortholog is 100%.

Group of orthologs #1218. Best score 88 bits
Score difference with first non-orthologous sequence - A.carolinensis:88 P.jiroveci:88

H9GIW3              	100.00%		L0PHU9              	100.00%
Bootstrap support for H9GIW3 as seed ortholog is 100%.
Bootstrap support for L0PHU9 as seed ortholog is 100%.

Group of orthologs #1219. Best score 87 bits
Score difference with first non-orthologous sequence - A.carolinensis:87 P.jiroveci:87

G1KKU5              	100.00%		L0PGW3              	100.00%
Bootstrap support for G1KKU5 as seed ortholog is 100%.
Bootstrap support for L0PGW3 as seed ortholog is 100%.

Group of orthologs #1220. Best score 87 bits
Score difference with first non-orthologous sequence - A.carolinensis:10 P.jiroveci:87

H9G3K7              	100.00%		L0PFE2              	100.00%
Bootstrap support for H9G3K7 as seed ortholog is 61%.
Alternative seed ortholog is H9GPE9 (10 bits away from this cluster)
Bootstrap support for L0PFE2 as seed ortholog is 100%.

Group of orthologs #1221. Best score 87 bits
Score difference with first non-orthologous sequence - A.carolinensis:87 P.jiroveci:87

H9G4L5              	100.00%		L0PFU9              	100.00%
Bootstrap support for H9G4L5 as seed ortholog is 100%.
Bootstrap support for L0PFU9 as seed ortholog is 100%.

Group of orthologs #1222. Best score 87 bits
Score difference with first non-orthologous sequence - A.carolinensis:87 P.jiroveci:87

H9GDL9              	100.00%		L0PAW5              	100.00%
Bootstrap support for H9GDL9 as seed ortholog is 100%.
Bootstrap support for L0PAW5 as seed ortholog is 100%.

Group of orthologs #1223. Best score 87 bits
Score difference with first non-orthologous sequence - A.carolinensis:87 P.jiroveci:87

H9GKG4              	100.00%		L0PEF7              	100.00%
Bootstrap support for H9GKG4 as seed ortholog is 100%.
Bootstrap support for L0PEF7 as seed ortholog is 100%.

Group of orthologs #1224. Best score 87 bits
Score difference with first non-orthologous sequence - A.carolinensis:87 P.jiroveci:87

H9GJQ4              	100.00%		L0PGS9              	100.00%
Bootstrap support for H9GJQ4 as seed ortholog is 100%.
Bootstrap support for L0PGS9 as seed ortholog is 100%.

Group of orthologs #1225. Best score 86 bits
Score difference with first non-orthologous sequence - A.carolinensis:24 P.jiroveci:86

H9GIF3              	100.00%		L0PCN8              	100.00%
H9GFN3              	38.66%		
G1KTI6              	30.67%		
G1K9E6              	8.32%		
Bootstrap support for H9GIF3 as seed ortholog is 74%.
Alternative seed ortholog is G1KDK7 (24 bits away from this cluster)
Bootstrap support for L0PCN8 as seed ortholog is 100%.

Group of orthologs #1226. Best score 86 bits
Score difference with first non-orthologous sequence - A.carolinensis:86 P.jiroveci:86

G1KIB9              	100.00%		L0PGS0              	100.00%
G1KQZ4              	48.22%		
Bootstrap support for G1KIB9 as seed ortholog is 100%.
Bootstrap support for L0PGS0 as seed ortholog is 100%.

Group of orthologs #1227. Best score 86 bits
Score difference with first non-orthologous sequence - A.carolinensis:86 P.jiroveci:86

G1KPS5              	100.00%		L0PDW0              	100.00%
Bootstrap support for G1KPS5 as seed ortholog is 100%.
Bootstrap support for L0PDW0 as seed ortholog is 100%.

Group of orthologs #1228. Best score 85 bits
Score difference with first non-orthologous sequence - A.carolinensis:85 P.jiroveci:85

G1KL99              	100.00%		L0P8Q8              	100.00%
H9GDQ9              	16.28%		
G1KDX8              	15.83%		
Bootstrap support for G1KL99 as seed ortholog is 100%.
Bootstrap support for L0P8Q8 as seed ortholog is 100%.

Group of orthologs #1229. Best score 85 bits
Score difference with first non-orthologous sequence - A.carolinensis:85 P.jiroveci:85

H9GFE2              	100.00%		L0PHZ2              	100.00%
H9GR45              	47.80%		
Bootstrap support for H9GFE2 as seed ortholog is 100%.
Bootstrap support for L0PHZ2 as seed ortholog is 100%.

Group of orthologs #1230. Best score 85 bits
Score difference with first non-orthologous sequence - A.carolinensis:85 P.jiroveci:19

G1KAB0              	100.00%		L0PAT8              	100.00%
Bootstrap support for G1KAB0 as seed ortholog is 100%.
Bootstrap support for L0PAT8 as seed ortholog is 71%.
Alternative seed ortholog is L0PEV0 (19 bits away from this cluster)

Group of orthologs #1231. Best score 85 bits
Score difference with first non-orthologous sequence - A.carolinensis:85 P.jiroveci:85

H9G5I2              	100.00%		L0PD30              	100.00%
Bootstrap support for H9G5I2 as seed ortholog is 100%.
Bootstrap support for L0PD30 as seed ortholog is 100%.

Group of orthologs #1232. Best score 85 bits
Score difference with first non-orthologous sequence - A.carolinensis:85 P.jiroveci:85

H9GHH2              	100.00%		L0PF35              	100.00%
Bootstrap support for H9GHH2 as seed ortholog is 100%.
Bootstrap support for L0PF35 as seed ortholog is 100%.

Group of orthologs #1233. Best score 85 bits
Score difference with first non-orthologous sequence - A.carolinensis:85 P.jiroveci:85

H9GNZ0              	100.00%		L0PF50              	100.00%
Bootstrap support for H9GNZ0 as seed ortholog is 100%.
Bootstrap support for L0PF50 as seed ortholog is 100%.

Group of orthologs #1234. Best score 84 bits
Score difference with first non-orthologous sequence - A.carolinensis:84 P.jiroveci:84

G1KFL8              	100.00%		L0PDG4              	100.00%
Bootstrap support for G1KFL8 as seed ortholog is 100%.
Bootstrap support for L0PDG4 as seed ortholog is 100%.

Group of orthologs #1235. Best score 84 bits
Score difference with first non-orthologous sequence - A.carolinensis:84 P.jiroveci:84

H9GAT4              	100.00%		L0PFF8              	100.00%
Bootstrap support for H9GAT4 as seed ortholog is 100%.
Bootstrap support for L0PFF8 as seed ortholog is 100%.

Group of orthologs #1236. Best score 83 bits
Score difference with first non-orthologous sequence - A.carolinensis:83 P.jiroveci:83

H9GU63              	100.00%		L0P7G0              	100.00%
                    	       		L0PGR6              	9.24%
Bootstrap support for H9GU63 as seed ortholog is 100%.
Bootstrap support for L0P7G0 as seed ortholog is 100%.

Group of orthologs #1237. Best score 83 bits
Score difference with first non-orthologous sequence - A.carolinensis:83 P.jiroveci:83

G1KEV9              	100.00%		L0PBC9              	100.00%
Bootstrap support for G1KEV9 as seed ortholog is 100%.
Bootstrap support for L0PBC9 as seed ortholog is 100%.

Group of orthologs #1238. Best score 83 bits
Score difference with first non-orthologous sequence - A.carolinensis:83 P.jiroveci:83

G1KD45              	100.00%		L0PDC5              	100.00%
Bootstrap support for G1KD45 as seed ortholog is 100%.
Bootstrap support for L0PDC5 as seed ortholog is 100%.

Group of orthologs #1239. Best score 83 bits
Score difference with first non-orthologous sequence - A.carolinensis:83 P.jiroveci:83

H9GEZ1              	100.00%		L0PDS8              	100.00%
Bootstrap support for H9GEZ1 as seed ortholog is 100%.
Bootstrap support for L0PDS8 as seed ortholog is 100%.

Group of orthologs #1240. Best score 83 bits
Score difference with first non-orthologous sequence - A.carolinensis:83 P.jiroveci:83

H9GGL0              	100.00%		L0PE40              	100.00%
Bootstrap support for H9GGL0 as seed ortholog is 100%.
Bootstrap support for L0PE40 as seed ortholog is 100%.

Group of orthologs #1241. Best score 83 bits
Score difference with first non-orthologous sequence - A.carolinensis:83 P.jiroveci:83

H9GJS8              	100.00%		L0PFF3              	100.00%
Bootstrap support for H9GJS8 as seed ortholog is 100%.
Bootstrap support for L0PFF3 as seed ortholog is 100%.

Group of orthologs #1242. Best score 82 bits
Score difference with first non-orthologous sequence - A.carolinensis:82 P.jiroveci:82

G1KB83              	100.00%		L0PB93              	100.00%
Bootstrap support for G1KB83 as seed ortholog is 100%.
Bootstrap support for L0PB93 as seed ortholog is 100%.

Group of orthologs #1243. Best score 82 bits
Score difference with first non-orthologous sequence - A.carolinensis:82 P.jiroveci:82

G1KJK4              	100.00%		L0PGB2              	100.00%
Bootstrap support for G1KJK4 as seed ortholog is 100%.
Bootstrap support for L0PGB2 as seed ortholog is 100%.

Group of orthologs #1244. Best score 82 bits
Score difference with first non-orthologous sequence - A.carolinensis:82 P.jiroveci:82

H9GE72              	100.00%		L0PEX2              	100.00%
Bootstrap support for H9GE72 as seed ortholog is 100%.
Bootstrap support for L0PEX2 as seed ortholog is 100%.

Group of orthologs #1245. Best score 81 bits
Score difference with first non-orthologous sequence - A.carolinensis:81 P.jiroveci:81

G1KTK6              	100.00%		L0PAZ6              	100.00%
G1K9L6              	45.81%		
G1KEV2              	40.28%		
Bootstrap support for G1KTK6 as seed ortholog is 100%.
Bootstrap support for L0PAZ6 as seed ortholog is 100%.

Group of orthologs #1246. Best score 81 bits
Score difference with first non-orthologous sequence - A.carolinensis:81 P.jiroveci:81

G1KSI4              	100.00%		L0PFM9              	100.00%
H9GF93              	7.07%		
Bootstrap support for G1KSI4 as seed ortholog is 100%.
Bootstrap support for L0PFM9 as seed ortholog is 100%.

Group of orthologs #1247. Best score 81 bits
Score difference with first non-orthologous sequence - A.carolinensis:81 P.jiroveci:81

G1KB31              	100.00%		L0PEX4              	100.00%
Bootstrap support for G1KB31 as seed ortholog is 100%.
Bootstrap support for L0PEX4 as seed ortholog is 100%.

Group of orthologs #1248. Best score 81 bits
Score difference with first non-orthologous sequence - A.carolinensis:81 P.jiroveci:81

G1KN25              	100.00%		L0PBX4              	100.00%
Bootstrap support for G1KN25 as seed ortholog is 100%.
Bootstrap support for L0PBX4 as seed ortholog is 100%.

Group of orthologs #1249. Best score 81 bits
Score difference with first non-orthologous sequence - A.carolinensis:81 P.jiroveci:81

G1KUR2              	100.00%		L0P8Z4              	100.00%
Bootstrap support for G1KUR2 as seed ortholog is 100%.
Bootstrap support for L0P8Z4 as seed ortholog is 100%.

Group of orthologs #1250. Best score 81 bits
Score difference with first non-orthologous sequence - A.carolinensis:81 P.jiroveci:25

H9G3V3              	100.00%		L0P9G4              	100.00%
Bootstrap support for H9G3V3 as seed ortholog is 100%.
Bootstrap support for L0P9G4 as seed ortholog is 80%.

Group of orthologs #1251. Best score 81 bits
Score difference with first non-orthologous sequence - A.carolinensis:81 P.jiroveci:81

H9G586              	100.00%		L0P9T3              	100.00%
Bootstrap support for H9G586 as seed ortholog is 100%.
Bootstrap support for L0P9T3 as seed ortholog is 100%.

Group of orthologs #1252. Best score 81 bits
Score difference with first non-orthologous sequence - A.carolinensis:81 P.jiroveci:81

H9G8S2              	100.00%		L0P9M2              	100.00%
Bootstrap support for H9G8S2 as seed ortholog is 100%.
Bootstrap support for L0P9M2 as seed ortholog is 100%.

Group of orthologs #1253. Best score 81 bits
Score difference with first non-orthologous sequence - A.carolinensis:81 P.jiroveci:81

H9GF82              	100.00%		L0P724              	100.00%
Bootstrap support for H9GF82 as seed ortholog is 100%.
Bootstrap support for L0P724 as seed ortholog is 100%.

Group of orthologs #1254. Best score 81 bits
Score difference with first non-orthologous sequence - A.carolinensis:81 P.jiroveci:81

H9GBI3              	100.00%		L0PE66              	100.00%
Bootstrap support for H9GBI3 as seed ortholog is 100%.
Bootstrap support for L0PE66 as seed ortholog is 100%.

Group of orthologs #1255. Best score 80 bits
Score difference with first non-orthologous sequence - A.carolinensis:80 P.jiroveci:80

G1KDT8              	100.00%		L0P883              	100.00%
Bootstrap support for G1KDT8 as seed ortholog is 100%.
Bootstrap support for L0P883 as seed ortholog is 100%.

Group of orthologs #1256. Best score 80 bits
Score difference with first non-orthologous sequence - A.carolinensis:80 P.jiroveci:80

H9GAT2              	100.00%		L0P7C7              	100.00%
Bootstrap support for H9GAT2 as seed ortholog is 100%.
Bootstrap support for L0P7C7 as seed ortholog is 100%.

Group of orthologs #1257. Best score 80 bits
Score difference with first non-orthologous sequence - A.carolinensis:80 P.jiroveci:80

H9G7R7              	100.00%		L0PE12              	100.00%
Bootstrap support for H9G7R7 as seed ortholog is 100%.
Bootstrap support for L0PE12 as seed ortholog is 100%.

Group of orthologs #1258. Best score 80 bits
Score difference with first non-orthologous sequence - A.carolinensis:2 P.jiroveci:80

H9GDN5              	100.00%		L0PA37              	100.00%
Bootstrap support for H9GDN5 as seed ortholog is 42%.
Alternative seed ortholog is G1KMZ3 (2 bits away from this cluster)
Bootstrap support for L0PA37 as seed ortholog is 100%.

Group of orthologs #1259. Best score 79 bits
Score difference with first non-orthologous sequence - A.carolinensis:32 P.jiroveci:79

H9GAB0              	100.00%		L0PFT1              	100.00%
H9G9W0              	64.90%		
H9GAB8              	18.37%		
H9G6T3              	13.88%		
Bootstrap support for H9GAB0 as seed ortholog is 91%.
Bootstrap support for L0PFT1 as seed ortholog is 100%.

Group of orthologs #1260. Best score 79 bits
Score difference with first non-orthologous sequence - A.carolinensis:79 P.jiroveci:79

H9G706              	100.00%		L0PD85              	100.00%
                    	       		L0PGV7              	62.98%
Bootstrap support for H9G706 as seed ortholog is 100%.
Bootstrap support for L0PD85 as seed ortholog is 100%.

Group of orthologs #1261. Best score 79 bits
Score difference with first non-orthologous sequence - A.carolinensis:79 P.jiroveci:79

G1KK77              	100.00%		L0P7T1              	100.00%
Bootstrap support for G1KK77 as seed ortholog is 100%.
Bootstrap support for L0P7T1 as seed ortholog is 100%.

Group of orthologs #1262. Best score 79 bits
Score difference with first non-orthologous sequence - A.carolinensis:79 P.jiroveci:79

G1KHE6              	100.00%		L0PFC7              	100.00%
Bootstrap support for G1KHE6 as seed ortholog is 100%.
Bootstrap support for L0PFC7 as seed ortholog is 100%.

Group of orthologs #1263. Best score 79 bits
Score difference with first non-orthologous sequence - A.carolinensis:79 P.jiroveci:79

G1KPP9              	100.00%		L0PBR0              	100.00%
Bootstrap support for G1KPP9 as seed ortholog is 100%.
Bootstrap support for L0PBR0 as seed ortholog is 100%.

Group of orthologs #1264. Best score 79 bits
Score difference with first non-orthologous sequence - A.carolinensis:79 P.jiroveci:79

H9G6Q5              	100.00%		L0P8R9              	100.00%
Bootstrap support for H9G6Q5 as seed ortholog is 100%.
Bootstrap support for L0P8R9 as seed ortholog is 100%.

Group of orthologs #1265. Best score 79 bits
Score difference with first non-orthologous sequence - A.carolinensis:1 P.jiroveci:79

H9G3V0              	100.00%		L0PDW2              	100.00%
Bootstrap support for H9G3V0 as seed ortholog is 47%.
Alternative seed ortholog is H9G8E9 (1 bits away from this cluster)
Bootstrap support for L0PDW2 as seed ortholog is 100%.

Group of orthologs #1266. Best score 79 bits
Score difference with first non-orthologous sequence - A.carolinensis:79 P.jiroveci:79

H9G818              	100.00%		L0PAW3              	100.00%
Bootstrap support for H9G818 as seed ortholog is 100%.
Bootstrap support for L0PAW3 as seed ortholog is 100%.

Group of orthologs #1267. Best score 79 bits
Score difference with first non-orthologous sequence - A.carolinensis:79 P.jiroveci:79

H9GIE7              	100.00%		L0PAS9              	100.00%
Bootstrap support for H9GIE7 as seed ortholog is 100%.
Bootstrap support for L0PAS9 as seed ortholog is 100%.

Group of orthologs #1268. Best score 79 bits
Score difference with first non-orthologous sequence - A.carolinensis:79 P.jiroveci:79

H9GJ37              	100.00%		L0PDB5              	100.00%
Bootstrap support for H9GJ37 as seed ortholog is 100%.
Bootstrap support for L0PDB5 as seed ortholog is 100%.

Group of orthologs #1269. Best score 78 bits
Score difference with first non-orthologous sequence - A.carolinensis:18 P.jiroveci:78

G1KA81              	100.00%		L0PE88              	100.00%
H9GEW6              	100.00%		
G1KK40              	63.07%		
H9GNW1              	50.88%		
G1KE18              	6.71%		
G1KAK7              	6.38%		
G1KFU6              	5.03%		
Bootstrap support for G1KA81 as seed ortholog is 68%.
Alternative seed ortholog is G1KFK7 (18 bits away from this cluster)
Bootstrap support for H9GEW6 as seed ortholog is 70%.
Alternative seed ortholog is G1KFK7 (18 bits away from this cluster)
Bootstrap support for L0PE88 as seed ortholog is 100%.

Group of orthologs #1270. Best score 78 bits
Score difference with first non-orthologous sequence - A.carolinensis:78 P.jiroveci:78

G1KCJ1              	100.00%		L0PFL2              	100.00%
Bootstrap support for G1KCJ1 as seed ortholog is 100%.
Bootstrap support for L0PFL2 as seed ortholog is 100%.

Group of orthologs #1271. Best score 78 bits
Score difference with first non-orthologous sequence - A.carolinensis:78 P.jiroveci:78

G1KQ82              	100.00%		L0P988              	100.00%
Bootstrap support for G1KQ82 as seed ortholog is 100%.
Bootstrap support for L0P988 as seed ortholog is 100%.

Group of orthologs #1272. Best score 78 bits
Score difference with first non-orthologous sequence - A.carolinensis:31 P.jiroveci:28

H9GFG7              	100.00%		L0PG69              	100.00%
Bootstrap support for H9GFG7 as seed ortholog is 81%.
Bootstrap support for L0PG69 as seed ortholog is 79%.

Group of orthologs #1273. Best score 78 bits
Score difference with first non-orthologous sequence - A.carolinensis:78 P.jiroveci:78

H9GTE2              	100.00%		L0PB39              	100.00%
Bootstrap support for H9GTE2 as seed ortholog is 100%.
Bootstrap support for L0PB39 as seed ortholog is 100%.

Group of orthologs #1274. Best score 77 bits
Score difference with first non-orthologous sequence - A.carolinensis:77 P.jiroveci:77

G1KBH2              	100.00%		L0PCX6              	100.00%
Bootstrap support for G1KBH2 as seed ortholog is 100%.
Bootstrap support for L0PCX6 as seed ortholog is 100%.

Group of orthologs #1275. Best score 77 bits
Score difference with first non-orthologous sequence - A.carolinensis:77 P.jiroveci:77

G1KFW5              	100.00%		L0PBY4              	100.00%
Bootstrap support for G1KFW5 as seed ortholog is 100%.
Bootstrap support for L0PBY4 as seed ortholog is 100%.

Group of orthologs #1276. Best score 77 bits
Score difference with first non-orthologous sequence - A.carolinensis:77 P.jiroveci:77

G1KKH4              	100.00%		L0PA74              	100.00%
Bootstrap support for G1KKH4 as seed ortholog is 100%.
Bootstrap support for L0PA74 as seed ortholog is 100%.

Group of orthologs #1277. Best score 76 bits
Score difference with first non-orthologous sequence - A.carolinensis:34 P.jiroveci:76

H9GDG3              	100.00%		L0PBP5              	100.00%
G1KIQ7              	45.85%		
Bootstrap support for H9GDG3 as seed ortholog is 85%.
Bootstrap support for L0PBP5 as seed ortholog is 100%.

Group of orthologs #1278. Best score 76 bits
Score difference with first non-orthologous sequence - A.carolinensis:76 P.jiroveci:76

H9GKD7              	100.00%		L0PF05              	100.00%
H9GMB6              	19.42%		
Bootstrap support for H9GKD7 as seed ortholog is 100%.
Bootstrap support for L0PF05 as seed ortholog is 100%.

Group of orthologs #1279. Best score 76 bits
Score difference with first non-orthologous sequence - A.carolinensis:76 P.jiroveci:76

G1KEF8              	100.00%		L0PFX1              	100.00%
Bootstrap support for G1KEF8 as seed ortholog is 100%.
Bootstrap support for L0PFX1 as seed ortholog is 100%.

Group of orthologs #1280. Best score 76 bits
Score difference with first non-orthologous sequence - A.carolinensis:76 P.jiroveci:76

G1KTD8              	100.00%		L0P954              	100.00%
Bootstrap support for G1KTD8 as seed ortholog is 100%.
Bootstrap support for L0P954 as seed ortholog is 100%.

Group of orthologs #1281. Best score 76 bits
Score difference with first non-orthologous sequence - A.carolinensis:76 P.jiroveci:76

H9GFA5              	100.00%		L0P9K1              	100.00%
Bootstrap support for H9GFA5 as seed ortholog is 100%.
Bootstrap support for L0P9K1 as seed ortholog is 100%.

Group of orthologs #1282. Best score 76 bits
Score difference with first non-orthologous sequence - A.carolinensis:76 P.jiroveci:76

H9GFM6              	100.00%		L0PDR4              	100.00%
Bootstrap support for H9GFM6 as seed ortholog is 100%.
Bootstrap support for L0PDR4 as seed ortholog is 100%.

Group of orthologs #1283. Best score 76 bits
Score difference with first non-orthologous sequence - A.carolinensis:76 P.jiroveci:76

H9GIP3              	100.00%		L0PCB5              	100.00%
Bootstrap support for H9GIP3 as seed ortholog is 100%.
Bootstrap support for L0PCB5 as seed ortholog is 100%.

Group of orthologs #1284. Best score 76 bits
Score difference with first non-orthologous sequence - A.carolinensis:76 P.jiroveci:76

H9GK07              	100.00%		L0PDY2              	100.00%
Bootstrap support for H9GK07 as seed ortholog is 100%.
Bootstrap support for L0PDY2 as seed ortholog is 100%.

Group of orthologs #1285. Best score 76 bits
Score difference with first non-orthologous sequence - A.carolinensis:76 P.jiroveci:76

H9GPF1              	100.00%		L0P9V4              	100.00%
Bootstrap support for H9GPF1 as seed ortholog is 100%.
Bootstrap support for L0P9V4 as seed ortholog is 100%.

Group of orthologs #1286. Best score 76 bits
Score difference with first non-orthologous sequence - A.carolinensis:76 P.jiroveci:76

H9GS38              	100.00%		L0PD91              	100.00%
Bootstrap support for H9GS38 as seed ortholog is 100%.
Bootstrap support for L0PD91 as seed ortholog is 100%.

Group of orthologs #1287. Best score 75 bits
Score difference with first non-orthologous sequence - A.carolinensis:75 P.jiroveci:75

G1KB99              	100.00%		L0PED2              	100.00%
Bootstrap support for G1KB99 as seed ortholog is 100%.
Bootstrap support for L0PED2 as seed ortholog is 100%.

Group of orthologs #1288. Best score 75 bits
Score difference with first non-orthologous sequence - A.carolinensis:1 P.jiroveci:75

G1KIK6              	100.00%		L0P9U7              	100.00%
Bootstrap support for G1KIK6 as seed ortholog is 50%.
Alternative seed ortholog is H9GET6 (1 bits away from this cluster)
Bootstrap support for L0P9U7 as seed ortholog is 100%.

Group of orthologs #1289. Best score 75 bits
Score difference with first non-orthologous sequence - A.carolinensis:75 P.jiroveci:75

H9GIV5              	100.00%		L0P745              	100.00%
Bootstrap support for H9GIV5 as seed ortholog is 100%.
Bootstrap support for L0P745 as seed ortholog is 100%.

Group of orthologs #1290. Best score 75 bits
Score difference with first non-orthologous sequence - A.carolinensis:75 P.jiroveci:75

H9GCQ0              	100.00%		L0PFK4              	100.00%
Bootstrap support for H9GCQ0 as seed ortholog is 100%.
Bootstrap support for L0PFK4 as seed ortholog is 100%.

Group of orthologs #1291. Best score 74 bits
Score difference with first non-orthologous sequence - A.carolinensis:33 P.jiroveci:74

G1KH06              	100.00%		L0PAD3              	100.00%
G1KAD8              	73.57%		
G1KU25              	6.76%		
G1KCV7              	6.46%		
Bootstrap support for G1KH06 as seed ortholog is 81%.
Bootstrap support for L0PAD3 as seed ortholog is 100%.

Group of orthologs #1292. Best score 74 bits
Score difference with first non-orthologous sequence - A.carolinensis:10 P.jiroveci:74

H9G974              	100.00%		L0PEL1              	100.00%
G1KUH3              	60.85%		
Bootstrap support for H9G974 as seed ortholog is 56%.
Alternative seed ortholog is G1KID6 (10 bits away from this cluster)
Bootstrap support for L0PEL1 as seed ortholog is 100%.

Group of orthologs #1293. Best score 74 bits
Score difference with first non-orthologous sequence - A.carolinensis:74 P.jiroveci:74

G1KDU3              	100.00%		L0PA21              	100.00%
Bootstrap support for G1KDU3 as seed ortholog is 100%.
Bootstrap support for L0PA21 as seed ortholog is 100%.

Group of orthologs #1294. Best score 74 bits
Score difference with first non-orthologous sequence - A.carolinensis:74 P.jiroveci:74

H9GBM8              	100.00%		L0PDE2              	100.00%
Bootstrap support for H9GBM8 as seed ortholog is 100%.
Bootstrap support for L0PDE2 as seed ortholog is 100%.

Group of orthologs #1295. Best score 74 bits
Score difference with first non-orthologous sequence - A.carolinensis:74 P.jiroveci:74

H9GEN0              	100.00%		L0PFR5              	100.00%
Bootstrap support for H9GEN0 as seed ortholog is 100%.
Bootstrap support for L0PFR5 as seed ortholog is 100%.

Group of orthologs #1296. Best score 74 bits
Score difference with first non-orthologous sequence - A.carolinensis:74 P.jiroveci:74

H9GLI2              	100.00%		L0PE06              	100.00%
Bootstrap support for H9GLI2 as seed ortholog is 100%.
Bootstrap support for L0PE06 as seed ortholog is 100%.

Group of orthologs #1297. Best score 73 bits
Score difference with first non-orthologous sequence - A.carolinensis:23 P.jiroveci:73

G1KHX6              	100.00%		L0PBX5              	100.00%
G1KF09              	17.26%		
H9GA31              	11.23%		
H9G5X8              	9.59%		
G1KSV6              	6.30%		
Bootstrap support for G1KHX6 as seed ortholog is 54%.
Alternative seed ortholog is G1KNW8 (23 bits away from this cluster)
Bootstrap support for L0PBX5 as seed ortholog is 100%.

Group of orthologs #1298. Best score 73 bits
Score difference with first non-orthologous sequence - A.carolinensis:73 P.jiroveci:73

G1KU53              	100.00%		L0PI79              	100.00%
H9GVN1              	25.12%		
Bootstrap support for G1KU53 as seed ortholog is 100%.
Bootstrap support for L0PI79 as seed ortholog is 100%.

Group of orthologs #1299. Best score 73 bits
Score difference with first non-orthologous sequence - A.carolinensis:73 P.jiroveci:73

H9G8R8              	100.00%		L0PG35              	100.00%
H9G7P4              	98.96%		
Bootstrap support for H9G8R8 as seed ortholog is 100%.
Bootstrap support for L0PG35 as seed ortholog is 100%.

Group of orthologs #1300. Best score 73 bits
Score difference with first non-orthologous sequence - A.carolinensis:73 P.jiroveci:73

G1KAV2              	100.00%		L0P813              	100.00%
Bootstrap support for G1KAV2 as seed ortholog is 100%.
Bootstrap support for L0P813 as seed ortholog is 100%.

Group of orthologs #1301. Best score 73 bits
Score difference with first non-orthologous sequence - A.carolinensis:73 P.jiroveci:73

G1KET6              	100.00%		L0P7K1              	100.00%
Bootstrap support for G1KET6 as seed ortholog is 100%.
Bootstrap support for L0P7K1 as seed ortholog is 100%.

Group of orthologs #1302. Best score 73 bits
Score difference with first non-orthologous sequence - A.carolinensis:73 P.jiroveci:73

H9GIJ3              	100.00%		L0PCB6              	100.00%
Bootstrap support for H9GIJ3 as seed ortholog is 100%.
Bootstrap support for L0PCB6 as seed ortholog is 100%.

Group of orthologs #1303. Best score 73 bits
Score difference with first non-orthologous sequence - A.carolinensis:73 P.jiroveci:73

H9GHR5              	100.00%		L0PD90              	100.00%
Bootstrap support for H9GHR5 as seed ortholog is 100%.
Bootstrap support for L0PD90 as seed ortholog is 100%.

Group of orthologs #1304. Best score 73 bits
Score difference with first non-orthologous sequence - A.carolinensis:73 P.jiroveci:73

H9GNA4              	100.00%		L0P9L0              	100.00%
Bootstrap support for H9GNA4 as seed ortholog is 100%.
Bootstrap support for L0P9L0 as seed ortholog is 100%.

Group of orthologs #1305. Best score 73 bits
Score difference with first non-orthologous sequence - A.carolinensis:73 P.jiroveci:73

H9GMR7              	100.00%		L0PCJ4              	100.00%
Bootstrap support for H9GMR7 as seed ortholog is 100%.
Bootstrap support for L0PCJ4 as seed ortholog is 100%.

Group of orthologs #1306. Best score 72 bits
Score difference with first non-orthologous sequence - A.carolinensis:13 P.jiroveci:72

H9GDH6              	100.00%		L0P8G6              	100.00%
H9GFM7              	10.13%		
H9GP35              	5.49%		
H9GP32              	5.06%		
Bootstrap support for H9GDH6 as seed ortholog is 64%.
Alternative seed ortholog is H9GCI2 (13 bits away from this cluster)
Bootstrap support for L0P8G6 as seed ortholog is 100%.

Group of orthologs #1307. Best score 72 bits
Score difference with first non-orthologous sequence - A.carolinensis:72 P.jiroveci:72

G1KT03              	100.00%		L0PAP8              	100.00%
Bootstrap support for G1KT03 as seed ortholog is 100%.
Bootstrap support for L0PAP8 as seed ortholog is 100%.

Group of orthologs #1308. Best score 71 bits
Score difference with first non-orthologous sequence - A.carolinensis:71 P.jiroveci:71

G1KC55              	100.00%		L0PCS8              	100.00%
G1KFX6              	62.16%		
G1KC51              	59.23%		
H9GJW3              	7.21%		
Bootstrap support for G1KC55 as seed ortholog is 100%.
Bootstrap support for L0PCS8 as seed ortholog is 100%.

Group of orthologs #1309. Best score 71 bits
Score difference with first non-orthologous sequence - A.carolinensis:10 P.jiroveci:71

H9GS21              	100.00%		L0PAT3              	100.00%
G1KB86              	76.38%		
H9GBS6              	74.80%		
H9G9T2              	55.91%		
Bootstrap support for H9GS21 as seed ortholog is 61%.
Alternative seed ortholog is H9GVR0 (10 bits away from this cluster)
Bootstrap support for L0PAT3 as seed ortholog is 100%.

Group of orthologs #1310. Best score 71 bits
Score difference with first non-orthologous sequence - A.carolinensis:71 P.jiroveci:71

G1KH19              	100.00%		L0P9R4              	100.00%
Bootstrap support for G1KH19 as seed ortholog is 100%.
Bootstrap support for L0P9R4 as seed ortholog is 100%.

Group of orthologs #1311. Best score 71 bits
Score difference with first non-orthologous sequence - A.carolinensis:71 P.jiroveci:71

G1KCN1              	100.00%		L0PE38              	100.00%
Bootstrap support for G1KCN1 as seed ortholog is 100%.
Bootstrap support for L0PE38 as seed ortholog is 100%.

Group of orthologs #1312. Best score 71 bits
Score difference with first non-orthologous sequence - A.carolinensis:71 P.jiroveci:71

H9G854              	100.00%		L0PFF1              	100.00%
Bootstrap support for H9G854 as seed ortholog is 100%.
Bootstrap support for L0PFF1 as seed ortholog is 100%.

Group of orthologs #1313. Best score 71 bits
Score difference with first non-orthologous sequence - A.carolinensis:71 P.jiroveci:71

H9GFP6              	100.00%		L0P944              	100.00%
Bootstrap support for H9GFP6 as seed ortholog is 100%.
Bootstrap support for L0P944 as seed ortholog is 100%.

Group of orthologs #1314. Best score 71 bits
Score difference with first non-orthologous sequence - A.carolinensis:71 P.jiroveci:71

H9GCT9              	100.00%		L0PDZ0              	100.00%
Bootstrap support for H9GCT9 as seed ortholog is 100%.
Bootstrap support for L0PDZ0 as seed ortholog is 100%.

Group of orthologs #1315. Best score 70 bits
Score difference with first non-orthologous sequence - A.carolinensis:16 P.jiroveci:70

H9GR59              	100.00%		L0PBK6              	100.00%
H9G6A7              	83.71%		
H9GPD4              	61.74%		
H9G5G6              	40.15%		
H9G5G9              	20.83%		
G1K9K9              	17.23%		
H9GJN2              	12.12%		
H9GJQ2              	11.36%		
H9GBN6              	9.28%		
H9GIE8              	7.39%		
L7MZV5              	6.82%		
H9GF67              	6.44%		
H9GG51              	6.44%		
L7MZU8              	6.44%		
L7MZV3              	5.49%		
Bootstrap support for H9GR59 as seed ortholog is 69%.
Alternative seed ortholog is G1KTB2 (16 bits away from this cluster)
Bootstrap support for L0PBK6 as seed ortholog is 100%.

Group of orthologs #1316. Best score 70 bits
Score difference with first non-orthologous sequence - A.carolinensis:70 P.jiroveci:70

H9G9Z7              	100.00%		L0PC15              	100.00%
H9GA10              	64.15%		
H9GA12              	61.13%		
H9GPY8              	45.47%		
G1KM68              	26.04%		
G1KUV9              	25.85%		
G1KPT8              	25.47%		
G1KMJ6              	25.09%		
G1KMC5              	23.40%		
G1KRT0              	22.64%		
H9GLU1              	17.17%		
Bootstrap support for H9G9Z7 as seed ortholog is 100%.
Bootstrap support for L0PC15 as seed ortholog is 100%.

Group of orthologs #1317. Best score 70 bits
Score difference with first non-orthologous sequence - A.carolinensis:70 P.jiroveci:70

H9G9T0              	100.00%		L0PHP2              	100.00%
H9G3U3              	97.09%		
H9GBR3              	32.99%		
G1K966              	18.75%		
Bootstrap support for H9G9T0 as seed ortholog is 100%.
Bootstrap support for L0PHP2 as seed ortholog is 100%.

Group of orthologs #1318. Best score 70 bits
Score difference with first non-orthologous sequence - A.carolinensis:70 P.jiroveci:70

G1KJK8              	100.00%		L0PBJ9              	100.00%
                    	       		L0PAV7              	85.96%
Bootstrap support for G1KJK8 as seed ortholog is 100%.
Bootstrap support for L0PBJ9 as seed ortholog is 100%.

Group of orthologs #1319. Best score 70 bits
Score difference with first non-orthologous sequence - A.carolinensis:70 P.jiroveci:70

G1KJI9              	100.00%		L0PEU8              	100.00%
Bootstrap support for G1KJI9 as seed ortholog is 100%.
Bootstrap support for L0PEU8 as seed ortholog is 100%.

Group of orthologs #1320. Best score 70 bits
Score difference with first non-orthologous sequence - A.carolinensis:70 P.jiroveci:70

H9GA35              	100.00%		L0PEH3              	100.00%
Bootstrap support for H9GA35 as seed ortholog is 100%.
Bootstrap support for L0PEH3 as seed ortholog is 100%.

Group of orthologs #1321. Best score 69 bits
Score difference with first non-orthologous sequence - A.carolinensis:69 P.jiroveci:69

G1KKV2              	100.00%		L0PEC4              	100.00%
Bootstrap support for G1KKV2 as seed ortholog is 100%.
Bootstrap support for L0PEC4 as seed ortholog is 100%.

Group of orthologs #1322. Best score 69 bits
Score difference with first non-orthologous sequence - A.carolinensis:69 P.jiroveci:69

H9GCD7              	100.00%		L0PAE3              	100.00%
Bootstrap support for H9GCD7 as seed ortholog is 100%.
Bootstrap support for L0PAE3 as seed ortholog is 100%.

Group of orthologs #1323. Best score 69 bits
Score difference with first non-orthologous sequence - A.carolinensis:69 P.jiroveci:69

H9GIZ7              	100.00%		L0P887              	100.00%
Bootstrap support for H9GIZ7 as seed ortholog is 100%.
Bootstrap support for L0P887 as seed ortholog is 100%.

Group of orthologs #1324. Best score 69 bits
Score difference with first non-orthologous sequence - A.carolinensis:69 P.jiroveci:69

H9GUA5              	100.00%		L0PCP0              	100.00%
Bootstrap support for H9GUA5 as seed ortholog is 100%.
Bootstrap support for L0PCP0 as seed ortholog is 100%.

Group of orthologs #1325. Best score 68 bits
Score difference with first non-orthologous sequence - A.carolinensis:68 P.jiroveci:68

H9GPE8              	100.00%		L0PEG8              	100.00%
Bootstrap support for H9GPE8 as seed ortholog is 100%.
Bootstrap support for L0PEG8 as seed ortholog is 100%.

Group of orthologs #1326. Best score 67 bits
Score difference with first non-orthologous sequence - A.carolinensis:67 P.jiroveci:67

G1KHH5              	100.00%		L0PCL8              	100.00%
G1K8E0              	61.61%		
G1KFT8              	15.73%		
H9G3K5              	14.74%		
H9G7S5              	13.19%		
Bootstrap support for G1KHH5 as seed ortholog is 100%.
Bootstrap support for L0PCL8 as seed ortholog is 100%.

Group of orthologs #1327. Best score 67 bits
Score difference with first non-orthologous sequence - A.carolinensis:67 P.jiroveci:67

H9GHD6              	100.00%		L0PG49              	100.00%
                    	       		L0PEF9              	85.33%
Bootstrap support for H9GHD6 as seed ortholog is 100%.
Bootstrap support for L0PG49 as seed ortholog is 100%.

Group of orthologs #1328. Best score 67 bits
Score difference with first non-orthologous sequence - A.carolinensis:67 P.jiroveci:67

G1K8Y2              	100.00%		L0PAF1              	100.00%
Bootstrap support for G1K8Y2 as seed ortholog is 100%.
Bootstrap support for L0PAF1 as seed ortholog is 100%.

Group of orthologs #1329. Best score 67 bits
Score difference with first non-orthologous sequence - A.carolinensis:67 P.jiroveci:67

G1KDU1              	100.00%		L0PF40              	100.00%
Bootstrap support for G1KDU1 as seed ortholog is 100%.
Bootstrap support for L0PF40 as seed ortholog is 100%.

Group of orthologs #1330. Best score 67 bits
Score difference with first non-orthologous sequence - A.carolinensis:67 P.jiroveci:67

H9G5N9              	100.00%		L0P7F8              	100.00%
Bootstrap support for H9G5N9 as seed ortholog is 100%.
Bootstrap support for L0P7F8 as seed ortholog is 100%.

Group of orthologs #1331. Best score 67 bits
Score difference with first non-orthologous sequence - A.carolinensis:67 P.jiroveci:67

H9GHR1              	100.00%		L0PEB6              	100.00%
Bootstrap support for H9GHR1 as seed ortholog is 100%.
Bootstrap support for L0PEB6 as seed ortholog is 100%.

Group of orthologs #1332. Best score 67 bits
Score difference with first non-orthologous sequence - A.carolinensis:67 P.jiroveci:67

H9GLP7              	100.00%		L0PC72              	100.00%
Bootstrap support for H9GLP7 as seed ortholog is 100%.
Bootstrap support for L0PC72 as seed ortholog is 100%.

Group of orthologs #1333. Best score 66 bits
Score difference with first non-orthologous sequence - A.carolinensis:66 P.jiroveci:66

G1KT26              	100.00%		L0P9X8              	100.00%
H9GUF7              	16.35%		
Bootstrap support for G1KT26 as seed ortholog is 100%.
Bootstrap support for L0P9X8 as seed ortholog is 100%.

Group of orthologs #1334. Best score 66 bits
Score difference with first non-orthologous sequence - A.carolinensis:66 P.jiroveci:66

G1KYQ7              	100.00%		L0PAG5              	100.00%
G1KRX9              	89.15%		
Bootstrap support for G1KYQ7 as seed ortholog is 100%.
Bootstrap support for L0PAG5 as seed ortholog is 100%.

Group of orthologs #1335. Best score 66 bits
Score difference with first non-orthologous sequence - A.carolinensis:66 P.jiroveci:66

H9G518              	100.00%		L0P8B5              	100.00%
Bootstrap support for H9G518 as seed ortholog is 100%.
Bootstrap support for L0P8B5 as seed ortholog is 100%.

Group of orthologs #1336. Best score 66 bits
Score difference with first non-orthologous sequence - A.carolinensis:66 P.jiroveci:66

H9G5V7              	100.00%		L0PEC7              	100.00%
Bootstrap support for H9G5V7 as seed ortholog is 100%.
Bootstrap support for L0PEC7 as seed ortholog is 100%.

Group of orthologs #1337. Best score 66 bits
Score difference with first non-orthologous sequence - A.carolinensis:66 P.jiroveci:21

H9G8Q3              	100.00%		L0PG11              	100.00%
Bootstrap support for H9G8Q3 as seed ortholog is 100%.
Bootstrap support for L0PG11 as seed ortholog is 76%.

Group of orthologs #1338. Best score 66 bits
Score difference with first non-orthologous sequence - A.carolinensis:66 P.jiroveci:66

H9GT88              	100.00%		L0PGK1              	100.00%
Bootstrap support for H9GT88 as seed ortholog is 100%.
Bootstrap support for L0PGK1 as seed ortholog is 100%.

Group of orthologs #1339. Best score 65 bits
Score difference with first non-orthologous sequence - A.carolinensis:65 P.jiroveci:65

H9G994              	100.00%		L0PAE2              	100.00%
H9GAC3              	57.14%		
Bootstrap support for H9G994 as seed ortholog is 100%.
Bootstrap support for L0PAE2 as seed ortholog is 100%.

Group of orthologs #1340. Best score 65 bits
Score difference with first non-orthologous sequence - A.carolinensis:65 P.jiroveci:65

G1KFD7              	100.00%		L0P8D1              	100.00%
Bootstrap support for G1KFD7 as seed ortholog is 100%.
Bootstrap support for L0P8D1 as seed ortholog is 100%.

Group of orthologs #1341. Best score 65 bits
Score difference with first non-orthologous sequence - A.carolinensis:65 P.jiroveci:65

G1KJU0              	100.00%		L0PEY1              	100.00%
Bootstrap support for G1KJU0 as seed ortholog is 100%.
Bootstrap support for L0PEY1 as seed ortholog is 100%.

Group of orthologs #1342. Best score 65 bits
Score difference with first non-orthologous sequence - A.carolinensis:65 P.jiroveci:65

G1KKG4              	100.00%		L0PEB3              	100.00%
Bootstrap support for G1KKG4 as seed ortholog is 100%.
Bootstrap support for L0PEB3 as seed ortholog is 100%.

Group of orthologs #1343. Best score 65 bits
Score difference with first non-orthologous sequence - A.carolinensis:65 P.jiroveci:65

H9G468              	100.00%		L0P937              	100.00%
Bootstrap support for H9G468 as seed ortholog is 100%.
Bootstrap support for L0P937 as seed ortholog is 100%.

Group of orthologs #1344. Best score 65 bits
Score difference with first non-orthologous sequence - A.carolinensis:65 P.jiroveci:65

H9GCW4              	100.00%		L0PAP7              	100.00%
Bootstrap support for H9GCW4 as seed ortholog is 100%.
Bootstrap support for L0PAP7 as seed ortholog is 100%.

Group of orthologs #1345. Best score 65 bits
Score difference with first non-orthologous sequence - A.carolinensis:65 P.jiroveci:65

H9GV54              	100.00%		L0PDW6              	100.00%
Bootstrap support for H9GV54 as seed ortholog is 100%.
Bootstrap support for L0PDW6 as seed ortholog is 100%.

Group of orthologs #1346. Best score 64 bits
Score difference with first non-orthologous sequence - A.carolinensis:64 P.jiroveci:64

G1KVQ5              	100.00%		L0PG94              	100.00%
H9GIS1              	57.17%		
H9GBS9              	36.57%		
H9GMX3              	23.64%		
G1KQQ7              	9.09%		
G1KUV7              	5.25%		
H9GAA7              	5.05%		
Bootstrap support for G1KVQ5 as seed ortholog is 100%.
Bootstrap support for L0PG94 as seed ortholog is 100%.

Group of orthologs #1347. Best score 64 bits
Score difference with first non-orthologous sequence - A.carolinensis:64 P.jiroveci:64

G1KCI0              	100.00%		L0PFS6              	100.00%
H9GLJ8              	52.10%		
Bootstrap support for G1KCI0 as seed ortholog is 100%.
Bootstrap support for L0PFS6 as seed ortholog is 100%.

Group of orthologs #1348. Best score 64 bits
Score difference with first non-orthologous sequence - A.carolinensis:64 P.jiroveci:64

H9G808              	100.00%		L0PB91              	100.00%
G1KLZ6              	53.66%		
Bootstrap support for H9G808 as seed ortholog is 100%.
Bootstrap support for L0PB91 as seed ortholog is 100%.

Group of orthologs #1349. Best score 64 bits
Score difference with first non-orthologous sequence - A.carolinensis:64 P.jiroveci:64

G1K9A3              	100.00%		L0P7Q6              	100.00%
Bootstrap support for G1K9A3 as seed ortholog is 100%.
Bootstrap support for L0P7Q6 as seed ortholog is 100%.

Group of orthologs #1350. Best score 64 bits
Score difference with first non-orthologous sequence - A.carolinensis:64 P.jiroveci:64

G1KLH3              	100.00%		L0P994              	100.00%
Bootstrap support for G1KLH3 as seed ortholog is 100%.
Bootstrap support for L0P994 as seed ortholog is 100%.

Group of orthologs #1351. Best score 64 bits
Score difference with first non-orthologous sequence - A.carolinensis:64 P.jiroveci:64

H9G4M4              	100.00%		L0PBP1              	100.00%
Bootstrap support for H9G4M4 as seed ortholog is 100%.
Bootstrap support for L0PBP1 as seed ortholog is 100%.

Group of orthologs #1352. Best score 64 bits
Score difference with first non-orthologous sequence - A.carolinensis:64 P.jiroveci:64

H9GLR6              	100.00%		L0PG83              	100.00%
Bootstrap support for H9GLR6 as seed ortholog is 100%.
Bootstrap support for L0PG83 as seed ortholog is 100%.

Group of orthologs #1353. Best score 63 bits
Score difference with first non-orthologous sequence - A.carolinensis:63 P.jiroveci:63

H9G714              	100.00%		L0PFT6              	100.00%
                    	       		L0P6V3              	44.90%
Bootstrap support for H9G714 as seed ortholog is 100%.
Bootstrap support for L0PFT6 as seed ortholog is 100%.

Group of orthologs #1354. Best score 63 bits
Score difference with first non-orthologous sequence - A.carolinensis:63 P.jiroveci:63

H9GIY4              	100.00%		L0PHF2              	100.00%
H9GK25              	14.29%		
Bootstrap support for H9GIY4 as seed ortholog is 100%.
Bootstrap support for L0PHF2 as seed ortholog is 100%.

Group of orthologs #1355. Best score 62 bits
Score difference with first non-orthologous sequence - A.carolinensis:62 P.jiroveci:62

G1KVS3              	100.00%		L0PBT4              	100.00%
G1KA11              	46.37%		
G1KJC7              	31.61%		
H9GK22              	23.83%		
Bootstrap support for G1KVS3 as seed ortholog is 100%.
Bootstrap support for L0PBT4 as seed ortholog is 100%.

Group of orthologs #1356. Best score 62 bits
Score difference with first non-orthologous sequence - A.carolinensis:62 P.jiroveci:62

H9GFU2              	100.00%		L0PEV7              	100.00%
G1KC77              	50.44%		
Bootstrap support for H9GFU2 as seed ortholog is 100%.
Bootstrap support for L0PEV7 as seed ortholog is 100%.

Group of orthologs #1357. Best score 62 bits
Score difference with first non-orthologous sequence - A.carolinensis:62 P.jiroveci:62

H9GMT4              	100.00%		L0PF02              	100.00%
G1KEZ7              	60.39%		
Bootstrap support for H9GMT4 as seed ortholog is 100%.
Bootstrap support for L0PF02 as seed ortholog is 100%.

Group of orthologs #1358. Best score 62 bits
Score difference with first non-orthologous sequence - A.carolinensis:62 P.jiroveci:62

G1KG90              	100.00%		L0PBS8              	100.00%
Bootstrap support for G1KG90 as seed ortholog is 100%.
Bootstrap support for L0PBS8 as seed ortholog is 100%.

Group of orthologs #1359. Best score 62 bits
Score difference with first non-orthologous sequence - A.carolinensis:62 P.jiroveci:62

G1KQ35              	100.00%		L0PEH0              	100.00%
Bootstrap support for G1KQ35 as seed ortholog is 100%.
Bootstrap support for L0PEH0 as seed ortholog is 100%.

Group of orthologs #1360. Best score 61 bits
Score difference with first non-orthologous sequence - A.carolinensis:5 P.jiroveci:61

H9GHQ9              	100.00%		L0PC69              	100.00%
H9G4L7              	6.56%		
G1KSY4              	5.02%		
Bootstrap support for H9GHQ9 as seed ortholog is 48%.
Alternative seed ortholog is G1KRH6 (5 bits away from this cluster)
Bootstrap support for L0PC69 as seed ortholog is 100%.

Group of orthologs #1361. Best score 61 bits
Score difference with first non-orthologous sequence - A.carolinensis:61 P.jiroveci:61

H9GSS8              	100.00%		L0PE16              	100.00%
G1KPL8              	72.00%		
Bootstrap support for H9GSS8 as seed ortholog is 100%.
Bootstrap support for L0PE16 as seed ortholog is 100%.

Group of orthologs #1362. Best score 61 bits
Score difference with first non-orthologous sequence - A.carolinensis:61 P.jiroveci:61

G1KDJ7              	100.00%		L0PDY5              	100.00%
Bootstrap support for G1KDJ7 as seed ortholog is 100%.
Bootstrap support for L0PDY5 as seed ortholog is 100%.

Group of orthologs #1363. Best score 61 bits
Score difference with first non-orthologous sequence - A.carolinensis:61 P.jiroveci:61

G1KF71              	100.00%		L0PE07              	100.00%
Bootstrap support for G1KF71 as seed ortholog is 100%.
Bootstrap support for L0PE07 as seed ortholog is 100%.

Group of orthologs #1364. Best score 60 bits
Score difference with first non-orthologous sequence - A.carolinensis:60 P.jiroveci:60

G1KSR5              	100.00%		L0PGK4              	100.00%
Bootstrap support for G1KSR5 as seed ortholog is 100%.
Bootstrap support for L0PGK4 as seed ortholog is 100%.

Group of orthologs #1365. Best score 60 bits
Score difference with first non-orthologous sequence - A.carolinensis:60 P.jiroveci:60

H9GGL1              	100.00%		L0PBW6              	100.00%
Bootstrap support for H9GGL1 as seed ortholog is 100%.
Bootstrap support for L0PBW6 as seed ortholog is 100%.

Group of orthologs #1366. Best score 60 bits
Score difference with first non-orthologous sequence - A.carolinensis:60 P.jiroveci:60

H9GHG4              	100.00%		L0PH05              	100.00%
Bootstrap support for H9GHG4 as seed ortholog is 100%.
Bootstrap support for L0PH05 as seed ortholog is 100%.

Group of orthologs #1367. Best score 59 bits
Score difference with first non-orthologous sequence - A.carolinensis:59 P.jiroveci:59

H9GDP9              	100.00%		L0PA64              	100.00%
H9GAZ8              	36.28%		
G1KRG4              	10.00%		
H9G375              	6.41%		
Bootstrap support for H9GDP9 as seed ortholog is 100%.
Bootstrap support for L0PA64 as seed ortholog is 100%.

Group of orthologs #1368. Best score 59 bits
Score difference with first non-orthologous sequence - A.carolinensis:59 P.jiroveci:59

G1KAZ5              	100.00%		L0PDN1              	100.00%
Bootstrap support for G1KAZ5 as seed ortholog is 100%.
Bootstrap support for L0PDN1 as seed ortholog is 100%.

Group of orthologs #1369. Best score 59 bits
Score difference with first non-orthologous sequence - A.carolinensis:59 P.jiroveci:59

G1KC87              	100.00%		L0PE69              	100.00%
Bootstrap support for G1KC87 as seed ortholog is 100%.
Bootstrap support for L0PE69 as seed ortholog is 100%.

Group of orthologs #1370. Best score 59 bits
Score difference with first non-orthologous sequence - A.carolinensis:59 P.jiroveci:59

H9GC45              	100.00%		L0PEN9              	100.00%
Bootstrap support for H9GC45 as seed ortholog is 100%.
Bootstrap support for L0PEN9 as seed ortholog is 100%.

Group of orthologs #1371. Best score 59 bits
Score difference with first non-orthologous sequence - A.carolinensis:59 P.jiroveci:59

H9GV50              	100.00%		L0PAI2              	100.00%
Bootstrap support for H9GV50 as seed ortholog is 100%.
Bootstrap support for L0PAI2 as seed ortholog is 100%.

Group of orthologs #1372. Best score 58 bits
Score difference with first non-orthologous sequence - A.carolinensis:58 P.jiroveci:58

G1KKI2              	100.00%		L0P929              	100.00%
H9GHJ6              	43.16%		
H9GCZ8              	40.42%		
Bootstrap support for G1KKI2 as seed ortholog is 100%.
Bootstrap support for L0P929 as seed ortholog is 100%.

Group of orthologs #1373. Best score 58 bits
Score difference with first non-orthologous sequence - A.carolinensis:58 P.jiroveci:58

G1KWS4              	100.00%		L0P7S5              	100.00%
Bootstrap support for G1KWS4 as seed ortholog is 100%.
Bootstrap support for L0P7S5 as seed ortholog is 100%.

Group of orthologs #1374. Best score 58 bits
Score difference with first non-orthologous sequence - A.carolinensis:58 P.jiroveci:58

H9GLS8              	100.00%		L0P7Y0              	100.00%
Bootstrap support for H9GLS8 as seed ortholog is 100%.
Bootstrap support for L0P7Y0 as seed ortholog is 100%.

Group of orthologs #1375. Best score 57 bits
Score difference with first non-orthologous sequence - A.carolinensis:57 P.jiroveci:57

G1KI32              	100.00%		L0PGI1              	100.00%
G1KC11              	22.79%		
Bootstrap support for G1KI32 as seed ortholog is 100%.
Bootstrap support for L0PGI1 as seed ortholog is 100%.

Group of orthologs #1376. Best score 57 bits
Score difference with first non-orthologous sequence - A.carolinensis:57 P.jiroveci:57

H9GS41              	100.00%		L0PC31              	100.00%
                    	       		L0PGG5              	100.00%
Bootstrap support for H9GS41 as seed ortholog is 100%.
Bootstrap support for L0PC31 as seed ortholog is 100%.
Bootstrap support for L0PGG5 as seed ortholog is 100%.

Group of orthologs #1377. Best score 57 bits
Score difference with first non-orthologous sequence - A.carolinensis:57 P.jiroveci:57

G1K8C7              	100.00%		L0PGI8              	100.00%
Bootstrap support for G1K8C7 as seed ortholog is 100%.
Bootstrap support for L0PGI8 as seed ortholog is 100%.

Group of orthologs #1378. Best score 57 bits
Score difference with first non-orthologous sequence - A.carolinensis:57 P.jiroveci:57

H9GB23              	100.00%		L0P7U7              	100.00%
Bootstrap support for H9GB23 as seed ortholog is 100%.
Bootstrap support for L0P7U7 as seed ortholog is 100%.

Group of orthologs #1379. Best score 57 bits
Score difference with first non-orthologous sequence - A.carolinensis:57 P.jiroveci:57

H9GB88              	100.00%		L0P8Q3              	100.00%
Bootstrap support for H9GB88 as seed ortholog is 100%.
Bootstrap support for L0P8Q3 as seed ortholog is 100%.

Group of orthologs #1380. Best score 57 bits
Score difference with first non-orthologous sequence - A.carolinensis:57 P.jiroveci:57

H9GCA0              	100.00%		L0P7L1              	100.00%
Bootstrap support for H9GCA0 as seed ortholog is 100%.
Bootstrap support for L0P7L1 as seed ortholog is 100%.

Group of orthologs #1381. Best score 57 bits
Score difference with first non-orthologous sequence - A.carolinensis:57 P.jiroveci:57

H9G9Z4              	100.00%		L0PCW0              	100.00%
Bootstrap support for H9G9Z4 as seed ortholog is 100%.
Bootstrap support for L0PCW0 as seed ortholog is 100%.

Group of orthologs #1382. Best score 57 bits
Score difference with first non-orthologous sequence - A.carolinensis:57 P.jiroveci:57

H9GF09              	100.00%		L0P979              	100.00%
Bootstrap support for H9GF09 as seed ortholog is 100%.
Bootstrap support for L0P979 as seed ortholog is 100%.

Group of orthologs #1383. Best score 56 bits
Score difference with first non-orthologous sequence - A.carolinensis:56 P.jiroveci:56

H9G6R3              	100.00%		L0PCQ9              	100.00%
H9GV33              	41.43%		
H9GGH5              	38.98%		
H9GSV6              	38.98%		
H9G886              	37.42%		
H9GR39              	36.97%		
H9GHU5              	36.30%		
G1KI12              	35.86%		
H9GQN7              	35.86%		
H9GQZ6              	35.52%		
H9GVH6              	35.30%		
H9GT08              	35.19%		
H9GRK6              	34.74%		
H9GQ33              	34.41%		
H9GV16              	34.19%		
L7MZI6              	34.19%		
H9GJF9              	34.08%		
G1KI06              	33.74%		
H9GQB2              	33.74%		
H9GA88              	33.74%		
G1KYL1              	33.63%		
H9GR90              	33.41%		
H9GTT0              	33.18%		
H9GA21              	33.07%		
H9GQD5              	32.63%		
G1KYS2              	32.29%		
H9GVH3              	31.96%		
G1KYA1              	31.85%		
H9GSL2              	31.29%		
H9GJY8              	31.29%		
H9GVH5              	30.96%		
H9GTE4              	30.73%		
H9GQ58              	30.29%		
H9GQN3              	30.18%		
H9GIM6              	30.07%		
G1KYU6              	29.84%		
H9GRP0              	29.84%		
G1KX82              	29.73%		
H9GBZ5              	29.73%		
H9GRR3              	29.29%		
H9GQQ4              	29.06%		
H9GRH7              	28.95%		
H9GQZ7              	28.95%		
G1KVY9              	28.40%		
G1KZD9              	28.40%		
G1KZ70              	27.73%		
G1KVF1              	27.17%		
H9GSD3              	26.73%		
H9GQN9              	25.95%		
H9GRX4              	25.95%		
H9GUK4              	25.84%		
H9GUZ1              	25.39%		
H9GL30              	25.39%		
H9GV03              	25.39%		
H9GJ10              	25.28%		
H9GR55              	25.17%		
G1KVW6              	25.17%		
L7MZF8              	24.83%		
H9GTC8              	24.72%		
H9GPL7              	24.50%		
H9GRP5              	24.39%		
H9GRE4              	24.39%		
H9GRY9              	24.28%		
L7MZH9              	24.16%		
H9GUN6              	24.16%		
H9GUJ1              	24.05%		
H9G3R2              	24.05%		
L7N015              	23.83%		
H9GTR2              	23.72%		
H9GTR3              	23.72%		
G1KXE3              	23.50%		
H9GTJ9              	23.50%		
H9GPB2              	23.50%		
H9GR70              	23.50%		
H9GU31              	23.50%		
L7MZN2              	23.27%		
H9GQW0              	23.27%		
H9GSY0              	23.16%		
G1KW98              	21.16%		
H9GH51              	21.16%		
H9GSF5              	19.71%		
H9GQ65              	17.93%		
H9GGQ1              	16.70%		
H9GUV6              	16.26%		
H9GSL7              	12.81%		
Bootstrap support for H9G6R3 as seed ortholog is 100%.
Bootstrap support for L0PCQ9 as seed ortholog is 100%.

Group of orthologs #1384. Best score 56 bits
Score difference with first non-orthologous sequence - A.carolinensis:56 P.jiroveci:56

G1KT31              	100.00%		L0PB06              	100.00%
Bootstrap support for G1KT31 as seed ortholog is 100%.
Bootstrap support for L0PB06 as seed ortholog is 100%.

Group of orthologs #1385. Best score 56 bits
Score difference with first non-orthologous sequence - A.carolinensis:56 P.jiroveci:56

H9G6S0              	100.00%		L0PAI3              	100.00%
Bootstrap support for H9G6S0 as seed ortholog is 100%.
Bootstrap support for L0PAI3 as seed ortholog is 100%.

Group of orthologs #1386. Best score 56 bits
Score difference with first non-orthologous sequence - A.carolinensis:56 P.jiroveci:56

H9GW20              	100.00%		L0PEM9              	100.00%
Bootstrap support for H9GW20 as seed ortholog is 100%.
Bootstrap support for L0PEM9 as seed ortholog is 100%.

Group of orthologs #1387. Best score 55 bits
Score difference with first non-orthologous sequence - A.carolinensis:55 P.jiroveci:55

H9GHP2              	100.00%		L0P9P6              	100.00%
Bootstrap support for H9GHP2 as seed ortholog is 100%.
Bootstrap support for L0P9P6 as seed ortholog is 100%.

Group of orthologs #1388. Best score 54 bits
Score difference with first non-orthologous sequence - A.carolinensis:54 P.jiroveci:54

G1KQW6              	100.00%		L0PES9              	100.00%
H9GPF7              	80.89%		
G1KLJ7              	23.00%		
G1KRA4              	22.75%		
H9GM66              	22.43%		
Bootstrap support for G1KQW6 as seed ortholog is 100%.
Bootstrap support for L0PES9 as seed ortholog is 100%.

Group of orthologs #1389. Best score 54 bits
Score difference with first non-orthologous sequence - A.carolinensis:54 P.jiroveci:54

G1KDK8              	100.00%		L0PBB5              	100.00%
G1KE50              	100.00%		
H9GJU1              	59.02%		
Bootstrap support for G1KDK8 as seed ortholog is 100%.
Bootstrap support for G1KE50 as seed ortholog is 100%.
Bootstrap support for L0PBB5 as seed ortholog is 100%.

Group of orthologs #1390. Best score 54 bits
Score difference with first non-orthologous sequence - A.carolinensis:54 P.jiroveci:54

G1KCK8              	100.00%		L0PH34              	100.00%
Bootstrap support for G1KCK8 as seed ortholog is 100%.
Bootstrap support for L0PH34 as seed ortholog is 100%.

Group of orthologs #1391. Best score 54 bits
Score difference with first non-orthologous sequence - A.carolinensis:54 P.jiroveci:54

G1KUD7              	100.00%		L0P8V0              	100.00%
Bootstrap support for G1KUD7 as seed ortholog is 100%.
Bootstrap support for L0P8V0 as seed ortholog is 100%.

Group of orthologs #1392. Best score 53 bits
Score difference with first non-orthologous sequence - A.carolinensis:53 P.jiroveci:53

G1KDC2              	100.00%		L0P8T6              	100.00%
G1KQX3              	16.35%		
Bootstrap support for G1KDC2 as seed ortholog is 100%.
Bootstrap support for L0P8T6 as seed ortholog is 100%.

Group of orthologs #1393. Best score 53 bits
Score difference with first non-orthologous sequence - A.carolinensis:53 P.jiroveci:53

H9G8M9              	100.00%		L0PFQ6              	100.00%
G1KZ25              	63.72%		
Bootstrap support for H9G8M9 as seed ortholog is 100%.
Bootstrap support for L0PFQ6 as seed ortholog is 100%.

Group of orthologs #1394. Best score 52 bits
Score difference with first non-orthologous sequence - A.carolinensis:52 P.jiroveci:52

G1KBC8              	100.00%		L0PEM7              	100.00%
G1KB36              	37.25%		
H9GFI8              	16.25%		
G1KN74              	11.50%		
Bootstrap support for G1KBC8 as seed ortholog is 100%.
Bootstrap support for L0PEM7 as seed ortholog is 100%.

Group of orthologs #1395. Best score 52 bits
Score difference with first non-orthologous sequence - A.carolinensis:52 P.jiroveci:52

G1KIC2              	100.00%		L0PEE9              	100.00%
Bootstrap support for G1KIC2 as seed ortholog is 100%.
Bootstrap support for L0PEE9 as seed ortholog is 100%.

Group of orthologs #1396. Best score 52 bits
Score difference with first non-orthologous sequence - A.carolinensis:52 P.jiroveci:52

H9G464              	100.00%		L0PAH6              	100.00%
Bootstrap support for H9G464 as seed ortholog is 100%.
Bootstrap support for L0PAH6 as seed ortholog is 100%.

Group of orthologs #1397. Best score 52 bits
Score difference with first non-orthologous sequence - A.carolinensis:52 P.jiroveci:52

H9GM99              	100.00%		L0P9A3              	100.00%
Bootstrap support for H9GM99 as seed ortholog is 100%.
Bootstrap support for L0P9A3 as seed ortholog is 100%.

Group of orthologs #1398. Best score 52 bits
Score difference with first non-orthologous sequence - A.carolinensis:52 P.jiroveci:52

H9GKZ2              	100.00%		L0PEQ6              	100.00%
Bootstrap support for H9GKZ2 as seed ortholog is 100%.
Bootstrap support for L0PEQ6 as seed ortholog is 100%.

Group of orthologs #1399. Best score 51 bits
Score difference with first non-orthologous sequence - A.carolinensis:51 P.jiroveci:51

G1K8R7              	100.00%		L0PA12              	100.00%
Bootstrap support for G1K8R7 as seed ortholog is 100%.
Bootstrap support for L0PA12 as seed ortholog is 100%.

Group of orthologs #1400. Best score 50 bits
Score difference with first non-orthologous sequence - A.carolinensis:8 P.jiroveci:50

G1KL69              	10.95%		L0P9T4              	100.00%
G1K9J7              	100.00%		L0PFA0              	100.00%
G1KEN3              	8.96%		
H9GU14              	7.46%		
Bootstrap support for G1K9J7 as seed ortholog is 63%.
Alternative seed ortholog is H9GCX3 (8 bits away from this cluster)
Bootstrap support for L0P9T4 as seed ortholog is 100%.
Bootstrap support for L0PFA0 as seed ortholog is 100%.

Group of orthologs #1401. Best score 50 bits
Score difference with first non-orthologous sequence - A.carolinensis:50 P.jiroveci:50

H9GHL4              	100.00%		L0PHA2              	100.00%
H9GA90              	49.47%		
Bootstrap support for H9GHL4 as seed ortholog is 100%.
Bootstrap support for L0PHA2 as seed ortholog is 100%.

Group of orthologs #1402. Best score 50 bits
Score difference with first non-orthologous sequence - A.carolinensis:50 P.jiroveci:50

H9GAH6              	100.00%		L0PA08              	100.00%
Bootstrap support for H9GAH6 as seed ortholog is 100%.
Bootstrap support for L0PA08 as seed ortholog is 100%.

Group of orthologs #1403. Best score 50 bits
Score difference with first non-orthologous sequence - A.carolinensis:50 P.jiroveci:50

H9GJ21              	100.00%		L0PA77              	100.00%
Bootstrap support for H9GJ21 as seed ortholog is 100%.
Bootstrap support for L0PA77 as seed ortholog is 100%.

Group of orthologs #1404. Best score 49 bits
Score difference with first non-orthologous sequence - A.carolinensis:49 P.jiroveci:49

H9GNS6              	100.00%		L0P8Y3              	100.00%
H9GIW8              	33.19%		
H9GAZ6              	31.59%		
G1KTC3              	9.61%		
Bootstrap support for H9GNS6 as seed ortholog is 100%.
Bootstrap support for L0P8Y3 as seed ortholog is 100%.

Group of orthologs #1405. Best score 49 bits
Score difference with first non-orthologous sequence - A.carolinensis:49 P.jiroveci:49

G1KD85              	100.00%		L0PA14              	100.00%
H9GDB0              	39.41%		
Bootstrap support for G1KD85 as seed ortholog is 100%.
Bootstrap support for L0PA14 as seed ortholog is 100%.

Group of orthologs #1406. Best score 49 bits
Score difference with first non-orthologous sequence - A.carolinensis:49 P.jiroveci:49

G1KQS7              	100.00%		L0PAQ5              	100.00%
G1KI14              	33.33%		
Bootstrap support for G1KQS7 as seed ortholog is 100%.
Bootstrap support for L0PAQ5 as seed ortholog is 100%.

Group of orthologs #1407. Best score 49 bits
Score difference with first non-orthologous sequence - A.carolinensis:49 P.jiroveci:49

H9GMA1              	100.00%		L0P8R3              	100.00%
                    	       		L0PB56              	100.00%
Bootstrap support for H9GMA1 as seed ortholog is 100%.
Bootstrap support for L0P8R3 as seed ortholog is 100%.
Bootstrap support for L0PB56 as seed ortholog is 100%.

Group of orthologs #1408. Best score 49 bits
Score difference with first non-orthologous sequence - A.carolinensis:49 P.jiroveci:49

H9G6X7              	100.00%		L0PGZ4              	100.00%
Bootstrap support for H9G6X7 as seed ortholog is 100%.
Bootstrap support for L0PGZ4 as seed ortholog is 100%.

Group of orthologs #1409. Best score 48 bits
Score difference with first non-orthologous sequence - A.carolinensis:48 P.jiroveci:48

G1KDN5              	100.00%		L0PDY6              	100.00%
Bootstrap support for G1KDN5 as seed ortholog is 100%.
Bootstrap support for L0PDY6 as seed ortholog is 100%.

Group of orthologs #1410. Best score 48 bits
Score difference with first non-orthologous sequence - A.carolinensis:48 P.jiroveci:48

G1KHT9              	100.00%		L0PHM6              	100.00%
Bootstrap support for G1KHT9 as seed ortholog is 100%.
Bootstrap support for L0PHM6 as seed ortholog is 100%.

Group of orthologs #1411. Best score 48 bits
Score difference with first non-orthologous sequence - A.carolinensis:48 P.jiroveci:48

H9GHW0              	100.00%		L0PDN9              	100.00%
Bootstrap support for H9GHW0 as seed ortholog is 100%.
Bootstrap support for L0PDN9 as seed ortholog is 100%.

Group of orthologs #1412. Best score 47 bits
Score difference with first non-orthologous sequence - A.carolinensis:47 P.jiroveci:47

G1K8K7              	100.00%		L0PCQ1              	100.00%
G1KFS7              	22.90%		
G1KPM0              	19.78%		
H9GNN4              	19.54%		
H9GAB3              	18.35%		
G1K8A8              	10.07%		
G1K8Y3              	8.87%		
Bootstrap support for G1K8K7 as seed ortholog is 100%.
Bootstrap support for L0PCQ1 as seed ortholog is 100%.

Group of orthologs #1413. Best score 47 bits
Score difference with first non-orthologous sequence - A.carolinensis:47 P.jiroveci:47

G1K8W1              	100.00%		L0PB26              	100.00%
G1KGF2              	11.98%		
H9GFF9              	11.16%		
Bootstrap support for G1K8W1 as seed ortholog is 100%.
Bootstrap support for L0PB26 as seed ortholog is 100%.

Group of orthologs #1414. Best score 47 bits
Score difference with first non-orthologous sequence - A.carolinensis:47 P.jiroveci:47

G1K8F0              	100.00%		L0P9W9              	100.00%
H9GFC5              	33.97%		
Bootstrap support for G1K8F0 as seed ortholog is 100%.
Bootstrap support for L0P9W9 as seed ortholog is 100%.

Group of orthologs #1415. Best score 47 bits
Score difference with first non-orthologous sequence - A.carolinensis:47 P.jiroveci:47

H9GEF3              	100.00%		L0P8A9              	100.00%
Bootstrap support for H9GEF3 as seed ortholog is 100%.
Bootstrap support for L0P8A9 as seed ortholog is 100%.

Group of orthologs #1416. Best score 47 bits
Score difference with first non-orthologous sequence - A.carolinensis:47 P.jiroveci:47

H9GGT5              	100.00%		L0P7X8              	100.00%
Bootstrap support for H9GGT5 as seed ortholog is 100%.
Bootstrap support for L0P7X8 as seed ortholog is 100%.

Group of orthologs #1417. Best score 46 bits
Score difference with first non-orthologous sequence - A.carolinensis:46 P.jiroveci:46

G1KUB7              	100.00%		L0PIF5              	100.00%
Bootstrap support for G1KUB7 as seed ortholog is 100%.
Bootstrap support for L0PIF5 as seed ortholog is 100%.

Group of orthologs #1418. Best score 46 bits
Score difference with first non-orthologous sequence - A.carolinensis:46 P.jiroveci:46

H9GQ41              	100.00%		L0PFI4              	100.00%
Bootstrap support for H9GQ41 as seed ortholog is 100%.
Bootstrap support for L0PFI4 as seed ortholog is 100%.

Group of orthologs #1419. Best score 45 bits
Score difference with first non-orthologous sequence - A.carolinensis:45 P.jiroveci:45

G1KMR0              	100.00%		L0PGA3              	100.00%
Bootstrap support for G1KMR0 as seed ortholog is 100%.
Bootstrap support for L0PGA3 as seed ortholog is 100%.

Group of orthologs #1420. Best score 45 bits
Score difference with first non-orthologous sequence - A.carolinensis:45 P.jiroveci:45

G1KTZ3              	100.00%		L0PBM1              	100.00%
Bootstrap support for G1KTZ3 as seed ortholog is 100%.
Bootstrap support for L0PBM1 as seed ortholog is 100%.

Group of orthologs #1421. Best score 45 bits
Score difference with first non-orthologous sequence - A.carolinensis:45 P.jiroveci:45

H9GB10              	100.00%		L0P881              	100.00%
Bootstrap support for H9GB10 as seed ortholog is 100%.
Bootstrap support for L0P881 as seed ortholog is 100%.

Group of orthologs #1422. Best score 45 bits
Score difference with first non-orthologous sequence - A.carolinensis:45 P.jiroveci:45

H9G708              	100.00%		L0PGU4              	100.00%
Bootstrap support for H9G708 as seed ortholog is 100%.
Bootstrap support for L0PGU4 as seed ortholog is 100%.

Group of orthologs #1423. Best score 45 bits
Score difference with first non-orthologous sequence - A.carolinensis:45 P.jiroveci:45

H9GDW9              	100.00%		L0PFX7              	100.00%
Bootstrap support for H9GDW9 as seed ortholog is 100%.
Bootstrap support for L0PFX7 as seed ortholog is 100%.

Group of orthologs #1424. Best score 44 bits
Score difference with first non-orthologous sequence - A.carolinensis:44 P.jiroveci:44

H9GDV4              	100.00%		L0P8V4              	100.00%
G1KFI6              	36.74%		
Bootstrap support for H9GDV4 as seed ortholog is 100%.
Bootstrap support for L0P8V4 as seed ortholog is 100%.

Group of orthologs #1425. Best score 44 bits
Score difference with first non-orthologous sequence - A.carolinensis:44 P.jiroveci:44

H9GM61              	100.00%		L0P9B7              	100.00%
Bootstrap support for H9GM61 as seed ortholog is 100%.
Bootstrap support for L0P9B7 as seed ortholog is 100%.

Group of orthologs #1426. Best score 43 bits
Score difference with first non-orthologous sequence - A.carolinensis:43 P.jiroveci:43

G1KSC8              	100.00%		L0PAC6              	100.00%
H9GIQ3              	43.18%		
H9GIQ4              	34.66%		
Bootstrap support for G1KSC8 as seed ortholog is 100%.
Bootstrap support for L0PAC6 as seed ortholog is 100%.

Group of orthologs #1427. Best score 43 bits
Score difference with first non-orthologous sequence - A.carolinensis:43 P.jiroveci:43

H9G9E8              	100.00%		L0PAD5              	100.00%
Bootstrap support for H9G9E8 as seed ortholog is 100%.
Bootstrap support for L0PAD5 as seed ortholog is 100%.

Group of orthologs #1428. Best score 41 bits
Score difference with first non-orthologous sequence - A.carolinensis:41 P.jiroveci:41

H9GGV9              	100.00%		L0PAW0              	100.00%
Bootstrap support for H9GGV9 as seed ortholog is 100%.
Bootstrap support for L0PAW0 as seed ortholog is 100%.

Group of orthologs #1429. Best score 40 bits
Score difference with first non-orthologous sequence - A.carolinensis:40 P.jiroveci:40

H9GTA8              	100.00%		L0P7Z3              	100.00%
H9GMT2              	39.80%		
G1KHM6              	38.98%		
L7MZW6              	38.98%		
H9GSH8              	38.78%		
L7MZF5              	38.16%		
H9G3T2              	37.76%		
H9GS35              	37.55%		
H9GEF4              	37.35%		
H9GTH8              	37.14%		
H9G9B5              	36.94%		
H9G6R9              	36.73%		
H9GUK6              	36.53%		
H9GV60              	36.53%		
H9GTB2              	36.53%		
H9G3Q4              	36.33%		
H9GVJ5              	36.33%		
L7MZJ1              	36.33%		
L7MZU2              	36.33%		
L7N031              	36.12%		
H9GI30              	36.12%		
H9GSY2              	36.12%		
H9GUX9              	36.12%		
H9GW03              	36.12%		
L7MZF3              	36.12%		
L7MZG7              	36.12%		
H9GAE1              	36.12%		
H9GU07              	36.12%		
H9GTR4              	35.92%		
H9GU82              	35.92%		
H9GQS5              	35.92%		
H9GTQ6              	35.92%		
H9GUX3              	35.92%		
H9GVM5              	35.92%		
L7MZL3              	35.92%		
H9G8E4              	35.71%		
H9GJY0              	35.71%		
H9GSM8              	35.71%		
L7MZF9              	35.71%		
H9GU32              	35.71%		
H9GVG8              	35.71%		
H9GVJ4              	35.71%		
H9GR12              	35.71%		
H9GGN8              	35.51%		
L7MZE8              	35.51%		
H9G4F2              	35.51%		
H9GEH6              	35.51%		
H9GT48              	35.31%		
H9GTC9              	35.31%		
L7MZL1              	35.31%		
L7N006              	35.31%		
L7N024              	35.31%		
L7N037              	35.31%		
H9G495              	35.31%		
H9GQN6              	35.31%		
H9G3Y7              	35.31%		
H9GVW5              	35.31%		
L7MZT0              	35.31%		
H9GV35              	35.10%		
L7MZS7              	35.10%		
H9GLQ9              	35.10%		
H9GVI0              	35.10%		
H9G9R9              	34.90%		
H9GQB1              	34.90%		
H9GQL0              	34.90%		
H9G4E3              	34.90%		
H9GSE0              	34.90%		
H9GUL7              	34.90%		
L7N036              	34.69%		
H9G9V5              	34.69%		
H9GJ64              	34.69%		
H9GQT7              	34.69%		
L7MZX4              	34.69%		
H9GS15              	34.49%		
H9GV99              	34.49%		
H9GVD7              	34.49%		
H9GCB1              	34.49%		
H9GSF9              	34.49%		
L7MZW4              	34.29%		
H9G443              	34.29%		
H9GMC1              	34.29%		
L7MZK8              	34.29%		
H9GG69              	34.29%		
H9GLI8              	34.08%		
L7MZE3              	34.08%		
H9GQ53              	34.08%		
H9GQY1              	34.08%		
H9GSD6              	33.88%		
H9GP10              	33.88%		
H9GRA5              	33.67%		
H9GFR4              	33.67%		
G1KGH7              	33.47%		
H9GDQ1              	33.47%		
H9GUB4              	33.47%		
H9GQ04              	33.27%		
H9GRT3              	33.06%		
H9GW06              	33.06%		
H9G3R0              	32.65%		
H9GJD9              	32.65%		
H9GVQ8              	32.45%		
H9GT49              	32.04%		
H9GTM9              	31.84%		
H9GTV1              	31.63%		
G1KLA1              	31.43%		
G1KVR1              	31.43%		
L7MZW8              	31.43%		
H9GQ95              	31.22%		
H9GT15              	30.82%		
H9GT39              	30.41%		
G1KWP2              	29.59%		
G1KWU9              	28.37%		
H9GV02              	28.16%		
G1KUQ7              	27.96%		
G1KBD8              	27.76%		
G1KUI2              	27.55%		
G1KCA6              	27.35%		
H9GVX8              	26.12%		
H9GW08              	25.71%		
H9GTI9              	25.10%		
H9GDI2              	24.49%		
H9GNN5              	24.08%		
G1KW52              	22.24%		
L7MZI7              	21.84%		
G1KCV3              	20.20%		
G1KYX8              	18.98%		
H9GB01              	18.98%		
H9GRH0              	17.96%		
H9GDW8              	17.55%		
H9GN29              	15.92%		
H9GVH1              	15.71%		
H9GR07              	15.51%		
G1KXS5              	14.08%		
H9GLE5              	13.47%		
H9GTR9              	12.24%		
H9GFK6              	11.63%		
H9GT68              	11.43%		
G1KPM6              	6.94%		
G1K9H2              	5.31%		
H9GJB2              	5.10%		
Bootstrap support for H9GTA8 as seed ortholog is 100%.
Bootstrap support for L0P7Z3 as seed ortholog is 100%.

Group of orthologs #1430. Best score 40 bits
Score difference with first non-orthologous sequence - A.carolinensis:40 P.jiroveci:40

G1KDI7              	100.00%		L0PAV1              	100.00%
Bootstrap support for G1KDI7 as seed ortholog is 100%.
Bootstrap support for L0PAV1 as seed ortholog is 100%.