###################################
196 groups of orthologs
332 in-paralogs from A.carolinensis
199 in-paralogs from C.trachomatis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 923 bits
Score difference with first non-orthologous sequence - A.carolinensis:668 C.trachomatis:923

G1KJ05              	100.00%		O84022              	100.00%
Bootstrap support for G1KJ05 as seed ortholog is 100%.
Bootstrap support for O84022 as seed ortholog is 100%.

Group of orthologs #2. Best score 794 bits
Score difference with first non-orthologous sequence - A.carolinensis:794 C.trachomatis:794

G1KPJ7              	100.00%		O84250              	100.00%
H9GA02              	58.88%		
H9GKI5              	31.52%		
Bootstrap support for G1KPJ7 as seed ortholog is 100%.
Bootstrap support for O84250 as seed ortholog is 100%.

Group of orthologs #3. Best score 715 bits
Score difference with first non-orthologous sequence - A.carolinensis:157 C.trachomatis:715

G1KRX3              	100.00%		P17821              	100.00%
Bootstrap support for G1KRX3 as seed ortholog is 99%.
Bootstrap support for P17821 as seed ortholog is 100%.

Group of orthologs #4. Best score 620 bits
Score difference with first non-orthologous sequence - A.carolinensis:620 C.trachomatis:620

H9G4Z1              	100.00%		O84716              	100.00%
H9GN52              	44.08%		
Bootstrap support for H9G4Z1 as seed ortholog is 100%.
Bootstrap support for O84716 as seed ortholog is 100%.

Group of orthologs #5. Best score 547 bits
Score difference with first non-orthologous sequence - A.carolinensis:466 C.trachomatis:359

H9GFC4              	100.00%		P0C0Z7              	100.00%
Bootstrap support for H9GFC4 as seed ortholog is 100%.
Bootstrap support for P0C0Z7 as seed ortholog is 100%.

Group of orthologs #6. Best score 515 bits
Score difference with first non-orthologous sequence - A.carolinensis:515 C.trachomatis:515

H9G5M3              	100.00%		O84057              	100.00%
H9GM16              	73.46%		
Bootstrap support for H9G5M3 as seed ortholog is 100%.
Bootstrap support for O84057 as seed ortholog is 100%.

Group of orthologs #7. Best score 510 bits
Score difference with first non-orthologous sequence - A.carolinensis:17 C.trachomatis:510

G1KFW0              	100.00%		O84444              	100.00%
Bootstrap support for G1KFW0 as seed ortholog is 63%.
Alternative seed ortholog is G1KIH6 (17 bits away from this cluster)
Bootstrap support for O84444 as seed ortholog is 100%.

Group of orthologs #8. Best score 483 bits
Score difference with first non-orthologous sequence - A.carolinensis:483 C.trachomatis:483

G1KJB7              	100.00%		O84863              	100.00%
Bootstrap support for G1KJB7 as seed ortholog is 100%.
Bootstrap support for O84863 as seed ortholog is 100%.

Group of orthologs #9. Best score 482 bits
Score difference with first non-orthologous sequence - A.carolinensis:482 C.trachomatis:482

H9GVY1              	100.00%		O84066              	100.00%
Bootstrap support for H9GVY1 as seed ortholog is 100%.
Bootstrap support for O84066 as seed ortholog is 100%.

Group of orthologs #10. Best score 471 bits
Score difference with first non-orthologous sequence - A.carolinensis:278 C.trachomatis:471

G1KUT8              	100.00%		O84304              	100.00%
Bootstrap support for G1KUT8 as seed ortholog is 99%.
Bootstrap support for O84304 as seed ortholog is 100%.

Group of orthologs #11. Best score 464 bits
Score difference with first non-orthologous sequence - A.carolinensis:464 C.trachomatis:464

H9G6Z3              	100.00%		O84754              	100.00%
G1KQ51              	24.68%		
Bootstrap support for H9G6Z3 as seed ortholog is 100%.
Bootstrap support for O84754 as seed ortholog is 100%.

Group of orthologs #12. Best score 463 bits
Score difference with first non-orthologous sequence - A.carolinensis:292 C.trachomatis:463

H9GA61              	100.00%		P0CD71              	100.00%
Bootstrap support for H9GA61 as seed ortholog is 100%.
Bootstrap support for P0CD71 as seed ortholog is 100%.

Group of orthologs #13. Best score 461 bits
Score difference with first non-orthologous sequence - A.carolinensis:461 C.trachomatis:461

H9GL04              	100.00%		O84348              	100.00%
Bootstrap support for H9GL04 as seed ortholog is 100%.
Bootstrap support for O84348 as seed ortholog is 100%.

Group of orthologs #14. Best score 456 bits
Score difference with first non-orthologous sequence - A.carolinensis:456 C.trachomatis:456

H9G776              	100.00%		O84834              	100.00%
Bootstrap support for H9G776 as seed ortholog is 100%.
Bootstrap support for O84834 as seed ortholog is 100%.

Group of orthologs #15. Best score 446 bits
Score difference with first non-orthologous sequence - A.carolinensis:15 C.trachomatis:446

H9GFG9              	100.00%		O84848              	100.00%
Bootstrap support for H9GFG9 as seed ortholog is 56%.
Alternative seed ortholog is G1KHA6 (15 bits away from this cluster)
Bootstrap support for O84848 as seed ortholog is 100%.

Group of orthologs #16. Best score 441 bits
Score difference with first non-orthologous sequence - A.carolinensis:441 C.trachomatis:441

H9G724              	100.00%		O84585              	100.00%
H9G3E4              	28.83%		
Bootstrap support for H9G724 as seed ortholog is 100%.
Bootstrap support for O84585 as seed ortholog is 100%.

Group of orthologs #17. Best score 441 bits
Score difference with first non-orthologous sequence - A.carolinensis:249 C.trachomatis:441

G1KDF6              	100.00%		O84460              	100.00%
Bootstrap support for G1KDF6 as seed ortholog is 100%.
Bootstrap support for O84460 as seed ortholog is 100%.

Group of orthologs #18. Best score 438 bits
Score difference with first non-orthologous sequence - A.carolinensis:328 C.trachomatis:438

H9GLE6              	100.00%		O84211              	100.00%
Bootstrap support for H9GLE6 as seed ortholog is 100%.
Bootstrap support for O84211 as seed ortholog is 100%.

Group of orthologs #19. Best score 430 bits
Score difference with first non-orthologous sequence - A.carolinensis:430 C.trachomatis:430

H9GNR8              	100.00%		Q59321              	100.00%
G1KL32              	66.15%		
Bootstrap support for H9GNR8 as seed ortholog is 100%.
Bootstrap support for Q59321 as seed ortholog is 100%.

Group of orthologs #20. Best score 408 bits
Score difference with first non-orthologous sequence - A.carolinensis:408 C.trachomatis:408

G1KCA1              	100.00%		O84849              	100.00%
Bootstrap support for G1KCA1 as seed ortholog is 100%.
Bootstrap support for O84849 as seed ortholog is 100%.

Group of orthologs #21. Best score 404 bits
Score difference with first non-orthologous sequence - A.carolinensis:166 C.trachomatis:404

G1KGN0              	100.00%		O84126              	100.00%
Bootstrap support for G1KGN0 as seed ortholog is 100%.
Bootstrap support for O84126 as seed ortholog is 100%.

Group of orthologs #22. Best score 403 bits
Score difference with first non-orthologous sequence - A.carolinensis:253 C.trachomatis:403

G1KR37              	100.00%		O84546              	100.00%
Bootstrap support for G1KR37 as seed ortholog is 100%.
Bootstrap support for O84546 as seed ortholog is 100%.

Group of orthologs #23. Best score 385 bits
Score difference with first non-orthologous sequence - A.carolinensis:385 C.trachomatis:385

H9GBY4              	100.00%		O84310              	100.00%
Bootstrap support for H9GBY4 as seed ortholog is 100%.
Bootstrap support for O84310 as seed ortholog is 100%.

Group of orthologs #24. Best score 373 bits
Score difference with first non-orthologous sequence - A.carolinensis:230 C.trachomatis:373

G1KBU9              	100.00%		O84098              	100.00%
Bootstrap support for G1KBU9 as seed ortholog is 100%.
Bootstrap support for O84098 as seed ortholog is 100%.

Group of orthologs #25. Best score 372 bits
Score difference with first non-orthologous sequence - A.carolinensis:372 C.trachomatis:372

G1KHM5              	100.00%		O84831              	100.00%
Bootstrap support for G1KHM5 as seed ortholog is 100%.
Bootstrap support for O84831 as seed ortholog is 100%.

Group of orthologs #26. Best score 371 bits
Score difference with first non-orthologous sequence - A.carolinensis:271 C.trachomatis:371

H9GAC4              	100.00%		O84591              	100.00%
Bootstrap support for H9GAC4 as seed ortholog is 100%.
Bootstrap support for O84591 as seed ortholog is 100%.

Group of orthologs #27. Best score 370 bits
Score difference with first non-orthologous sequence - A.carolinensis:370 C.trachomatis:370

H9GG09              	100.00%		P0CE13              	100.00%
H9GBL1              	31.21%		
Bootstrap support for H9GG09 as seed ortholog is 100%.
Bootstrap support for P0CE13 as seed ortholog is 100%.

Group of orthologs #28. Best score 343 bits
Score difference with first non-orthologous sequence - A.carolinensis:343 C.trachomatis:343

H9G967              	100.00%		P0CD73              	100.00%
Bootstrap support for H9G967 as seed ortholog is 100%.
Bootstrap support for P0CD73 as seed ortholog is 100%.

Group of orthologs #29. Best score 336 bits
Score difference with first non-orthologous sequence - A.carolinensis:336 C.trachomatis:336

G1K8H8              	100.00%		O84829              	100.00%
Bootstrap support for G1K8H8 as seed ortholog is 100%.
Bootstrap support for O84829 as seed ortholog is 100%.

Group of orthologs #30. Best score 327 bits
Score difference with first non-orthologous sequence - A.carolinensis:327 C.trachomatis:327

H9G9B4              	100.00%		O84711              	100.00%
Bootstrap support for H9G9B4 as seed ortholog is 100%.
Bootstrap support for O84711 as seed ortholog is 100%.

Group of orthologs #31. Best score 314 bits
Score difference with first non-orthologous sequence - A.carolinensis:201 C.trachomatis:314

G1KEK4              	100.00%		O84006              	100.00%
Bootstrap support for G1KEK4 as seed ortholog is 99%.
Bootstrap support for O84006 as seed ortholog is 100%.

Group of orthologs #32. Best score 314 bits
Score difference with first non-orthologous sequence - A.carolinensis:180 C.trachomatis:314

H9GBU1              	100.00%		O84035              	100.00%
Bootstrap support for H9GBU1 as seed ortholog is 99%.
Bootstrap support for O84035 as seed ortholog is 100%.

Group of orthologs #33. Best score 314 bits
Score difference with first non-orthologous sequence - A.carolinensis:240 C.trachomatis:314

H9GCX9              	100.00%		O84786              	100.00%
Bootstrap support for H9GCX9 as seed ortholog is 100%.
Bootstrap support for O84786 as seed ortholog is 100%.

Group of orthologs #34. Best score 313 bits
Score difference with first non-orthologous sequence - A.carolinensis:313 C.trachomatis:313

H9G640              	100.00%		P0CE09              	100.00%
G1KR53              	21.90%		
Bootstrap support for H9G640 as seed ortholog is 100%.
Bootstrap support for P0CE09 as seed ortholog is 100%.

Group of orthologs #35. Best score 310 bits
Score difference with first non-orthologous sequence - A.carolinensis:103 C.trachomatis:310

G1KLD8              	100.00%		O84248              	100.00%
Bootstrap support for G1KLD8 as seed ortholog is 99%.
Bootstrap support for O84248 as seed ortholog is 100%.

Group of orthologs #36. Best score 308 bits
Score difference with first non-orthologous sequence - A.carolinensis:308 C.trachomatis:308

H9G7C6              	100.00%		P0CD78              	100.00%
Bootstrap support for H9G7C6 as seed ortholog is 100%.
Bootstrap support for P0CD78 as seed ortholog is 100%.

Group of orthologs #37. Best score 304 bits
Score difference with first non-orthologous sequence - A.carolinensis:304 C.trachomatis:304

H9GHQ2              	100.00%		P0CE21              	100.00%
Bootstrap support for H9GHQ2 as seed ortholog is 100%.
Bootstrap support for P0CE21 as seed ortholog is 100%.

Group of orthologs #38. Best score 294 bits
Score difference with first non-orthologous sequence - A.carolinensis:294 C.trachomatis:294

G1KQV8              	100.00%		O84315              	100.00%
Bootstrap support for G1KQV8 as seed ortholog is 100%.
Bootstrap support for O84315 as seed ortholog is 100%.

Group of orthologs #39. Best score 294 bits
Score difference with first non-orthologous sequence - A.carolinensis:294 C.trachomatis:294

H9GEE9              	100.00%		O84775              	100.00%
Bootstrap support for H9GEE9 as seed ortholog is 100%.
Bootstrap support for O84775 as seed ortholog is 100%.

Group of orthologs #40. Best score 289 bits
Score difference with first non-orthologous sequence - A.carolinensis:56 C.trachomatis:289

G1KKD1              	100.00%		O84797              	100.00%
Bootstrap support for G1KKD1 as seed ortholog is 81%.
Bootstrap support for O84797 as seed ortholog is 100%.

Group of orthologs #41. Best score 287 bits
Score difference with first non-orthologous sequence - A.carolinensis:117 C.trachomatis:287

G1KR13              	100.00%		O84561              	100.00%
Bootstrap support for G1KR13 as seed ortholog is 99%.
Bootstrap support for O84561 as seed ortholog is 100%.

Group of orthologs #42. Best score 282 bits
Score difference with first non-orthologous sequence - A.carolinensis:282 C.trachomatis:282

H9GLG5              	100.00%		O84316              	100.00%
H9GDF6              	10.68%		
G1KM74              	5.76%		
Bootstrap support for H9GLG5 as seed ortholog is 100%.
Bootstrap support for O84316 as seed ortholog is 100%.

Group of orthologs #43. Best score 280 bits
Score difference with first non-orthologous sequence - A.carolinensis:280 C.trachomatis:280

G1KSW6              	100.00%		O84823              	100.00%
Bootstrap support for G1KSW6 as seed ortholog is 100%.
Bootstrap support for O84823 as seed ortholog is 100%.

Group of orthologs #44. Best score 279 bits
Score difference with first non-orthologous sequence - A.carolinensis:180 C.trachomatis:114

H9GQK6              	100.00%		O84249              	100.00%
Bootstrap support for H9GQK6 as seed ortholog is 99%.
Bootstrap support for O84249 as seed ortholog is 99%.

Group of orthologs #45. Best score 272 bits
Score difference with first non-orthologous sequence - A.carolinensis:272 C.trachomatis:272

G1KDL0              	100.00%		O84360              	100.00%
Bootstrap support for G1KDL0 as seed ortholog is 100%.
Bootstrap support for O84360 as seed ortholog is 100%.

Group of orthologs #46. Best score 270 bits
Score difference with first non-orthologous sequence - A.carolinensis:270 C.trachomatis:270

G1KIP7              	100.00%		O84698              	100.00%
Bootstrap support for G1KIP7 as seed ortholog is 100%.
Bootstrap support for O84698 as seed ortholog is 100%.

Group of orthologs #47. Best score 269 bits
Score difference with first non-orthologous sequence - A.carolinensis:269 C.trachomatis:269

H9GNW4              	100.00%		O84094              	100.00%
Bootstrap support for H9GNW4 as seed ortholog is 100%.
Bootstrap support for O84094 as seed ortholog is 100%.

Group of orthologs #48. Best score 268 bits
Score difference with first non-orthologous sequence - A.carolinensis:268 C.trachomatis:268

G1KMH2              	100.00%		O84188              	100.00%
Bootstrap support for G1KMH2 as seed ortholog is 100%.
Bootstrap support for O84188 as seed ortholog is 100%.

Group of orthologs #49. Best score 264 bits
Score difference with first non-orthologous sequence - A.carolinensis:178 C.trachomatis:264

G1KET7              	100.00%		O84381              	100.00%
Bootstrap support for G1KET7 as seed ortholog is 100%.
Bootstrap support for O84381 as seed ortholog is 100%.

Group of orthologs #50. Best score 264 bits
Score difference with first non-orthologous sequence - A.carolinensis:264 C.trachomatis:264

H9G532              	100.00%		P0CD72              	100.00%
Bootstrap support for H9G532 as seed ortholog is 100%.
Bootstrap support for P0CD72 as seed ortholog is 100%.

Group of orthologs #51. Best score 263 bits
Score difference with first non-orthologous sequence - A.carolinensis:263 C.trachomatis:263

H9G843              	100.00%		O84828              	100.00%
G1KQ74              	63.41%		
H9G845              	56.47%		
G1KQT2              	21.45%		
Bootstrap support for H9G843 as seed ortholog is 100%.
Bootstrap support for O84828 as seed ortholog is 100%.

Group of orthologs #52. Best score 262 bits
Score difference with first non-orthologous sequence - A.carolinensis:262 C.trachomatis:262

H9GI74              	100.00%		O84451              	100.00%
Bootstrap support for H9GI74 as seed ortholog is 100%.
Bootstrap support for O84451 as seed ortholog is 100%.

Group of orthologs #53. Best score 260 bits
Score difference with first non-orthologous sequence - A.carolinensis:126 C.trachomatis:260

H9G4C5              	100.00%		O84642              	100.00%
G1KC46              	22.32%		
Bootstrap support for H9G4C5 as seed ortholog is 99%.
Bootstrap support for O84642 as seed ortholog is 100%.

Group of orthologs #54. Best score 255 bits
Score difference with first non-orthologous sequence - A.carolinensis:255 C.trachomatis:76

G1KED9              	100.00%		O84026              	100.00%
G1K8Y0              	11.00%		
Bootstrap support for G1KED9 as seed ortholog is 100%.
Bootstrap support for O84026 as seed ortholog is 99%.

Group of orthologs #55. Best score 255 bits
Score difference with first non-orthologous sequence - A.carolinensis:255 C.trachomatis:255

H9GEV2              	100.00%		O84439              	100.00%
H9GB95              	51.83%		
Bootstrap support for H9GEV2 as seed ortholog is 100%.
Bootstrap support for O84439 as seed ortholog is 100%.

Group of orthologs #56. Best score 253 bits
Score difference with first non-orthologous sequence - A.carolinensis:253 C.trachomatis:253

G1KB84              	100.00%		O84007              	100.00%
Bootstrap support for G1KB84 as seed ortholog is 100%.
Bootstrap support for O84007 as seed ortholog is 100%.

Group of orthologs #57. Best score 248 bits
Score difference with first non-orthologous sequence - A.carolinensis:248 C.trachomatis:248

G1K8A3              	100.00%		P36431              	100.00%
Bootstrap support for G1K8A3 as seed ortholog is 100%.
Bootstrap support for P36431 as seed ortholog is 100%.

Group of orthologs #58. Best score 248 bits
Score difference with first non-orthologous sequence - A.carolinensis:248 C.trachomatis:248

G1KH08              	100.00%		O84289              	100.00%
Bootstrap support for G1KH08 as seed ortholog is 100%.
Bootstrap support for O84289 as seed ortholog is 100%.

Group of orthologs #59. Best score 248 bits
Score difference with first non-orthologous sequence - A.carolinensis:66 C.trachomatis:248

G1KS30              	100.00%		O84423              	100.00%
Bootstrap support for G1KS30 as seed ortholog is 94%.
Bootstrap support for O84423 as seed ortholog is 100%.

Group of orthologs #60. Best score 243 bits
Score difference with first non-orthologous sequence - A.carolinensis:243 C.trachomatis:243

G1K898              	100.00%		O84787              	100.00%
G1KF26              	6.05%		
Bootstrap support for G1K898 as seed ortholog is 100%.
Bootstrap support for O84787 as seed ortholog is 100%.

Group of orthologs #61. Best score 242 bits
Score difference with first non-orthologous sequence - A.carolinensis:186 C.trachomatis:242

H9G863              	100.00%		O84297              	100.00%
H9GCD8              	53.15%		
Bootstrap support for H9G863 as seed ortholog is 99%.
Bootstrap support for O84297 as seed ortholog is 100%.

Group of orthologs #62. Best score 241 bits
Score difference with first non-orthologous sequence - A.carolinensis:241 C.trachomatis:90

G1KT20              	100.00%		O84058              	100.00%
Bootstrap support for G1KT20 as seed ortholog is 100%.
Bootstrap support for O84058 as seed ortholog is 98%.

Group of orthologs #63. Best score 238 bits
Score difference with first non-orthologous sequence - A.carolinensis:136 C.trachomatis:238

H9GEL7              	100.00%		O84352              	100.00%
G1KKC5              	16.81%		
Bootstrap support for H9GEL7 as seed ortholog is 100%.
Bootstrap support for O84352 as seed ortholog is 100%.

Group of orthologs #64. Best score 238 bits
Score difference with first non-orthologous sequence - A.carolinensis:135 C.trachomatis:238

H9GKM4              	100.00%		O84548              	100.00%
Bootstrap support for H9GKM4 as seed ortholog is 99%.
Bootstrap support for O84548 as seed ortholog is 100%.

Group of orthologs #65. Best score 236 bits
Score difference with first non-orthologous sequence - A.carolinensis:170 C.trachomatis:236

H9G545              	100.00%		O84309              	100.00%
H9GD50              	40.85%		
Bootstrap support for H9G545 as seed ortholog is 99%.
Bootstrap support for O84309 as seed ortholog is 100%.

Group of orthologs #66. Best score 232 bits
Score difference with first non-orthologous sequence - A.carolinensis:232 C.trachomatis:232

G1KCW0              	100.00%		O84296              	100.00%
Bootstrap support for G1KCW0 as seed ortholog is 100%.
Bootstrap support for O84296 as seed ortholog is 100%.

Group of orthologs #67. Best score 231 bits
Score difference with first non-orthologous sequence - A.carolinensis:231 C.trachomatis:132

G1KCV6              	100.00%		O84406              	100.00%
H9GP93              	53.60%		
H9GF06              	30.07%		
G1KC01              	26.91%		
G1KI25              	24.89%		
G1K9W9              	18.92%		
H9GI31              	18.47%		
Bootstrap support for G1KCV6 as seed ortholog is 100%.
Bootstrap support for O84406 as seed ortholog is 99%.

Group of orthologs #68. Best score 225 bits
Score difference with first non-orthologous sequence - A.carolinensis:225 C.trachomatis:225

G1KZE7              	100.00%		O84562              	100.00%
Bootstrap support for G1KZE7 as seed ortholog is 100%.
Bootstrap support for O84562 as seed ortholog is 100%.

Group of orthologs #69. Best score 216 bits
Score difference with first non-orthologous sequence - A.carolinensis:216 C.trachomatis:94

G1KAG5              	100.00%		O84028              	100.00%
H9GGN6              	79.84%		
G1KWE1              	38.24%		
Bootstrap support for G1KAG5 as seed ortholog is 100%.
Bootstrap support for O84028 as seed ortholog is 99%.

Group of orthologs #70. Best score 216 bits
Score difference with first non-orthologous sequence - A.carolinensis:216 C.trachomatis:216

H9GB21              	100.00%		O84081              	100.00%
G1KL48              	53.67%		
Bootstrap support for H9GB21 as seed ortholog is 100%.
Bootstrap support for O84081 as seed ortholog is 100%.

Group of orthologs #71. Best score 209 bits
Score difference with first non-orthologous sequence - A.carolinensis:114 C.trachomatis:209

H9GMN0              	100.00%		O84266              	100.00%
H9GBR3              	24.17%		
G1K966              	14.16%		
H9G3U3              	11.75%		
H9G837              	11.52%		
H9G4P2              	7.15%		
Bootstrap support for H9GMN0 as seed ortholog is 99%.
Bootstrap support for O84266 as seed ortholog is 100%.

Group of orthologs #72. Best score 205 bits
Score difference with first non-orthologous sequence - A.carolinensis:205 C.trachomatis:67

G1KRA1              	100.00%		O84712              	100.00%
Bootstrap support for G1KRA1 as seed ortholog is 100%.
Bootstrap support for O84712 as seed ortholog is 99%.

Group of orthologs #73. Best score 204 bits
Score difference with first non-orthologous sequence - A.carolinensis:204 C.trachomatis:204

G1KJ75              	100.00%		O84596              	100.00%
Bootstrap support for G1KJ75 as seed ortholog is 100%.
Bootstrap support for O84596 as seed ortholog is 100%.

Group of orthologs #74. Best score 204 bits
Score difference with first non-orthologous sequence - A.carolinensis:204 C.trachomatis:204

H9G5T2              	100.00%		O84638              	100.00%
Bootstrap support for H9G5T2 as seed ortholog is 100%.
Bootstrap support for O84638 as seed ortholog is 100%.

Group of orthologs #75. Best score 201 bits
Score difference with first non-orthologous sequence - A.carolinensis:201 C.trachomatis:201

G1KRB6              	100.00%		O84196              	100.00%
Bootstrap support for G1KRB6 as seed ortholog is 100%.
Bootstrap support for O84196 as seed ortholog is 100%.

Group of orthologs #76. Best score 196 bits
Score difference with first non-orthologous sequence - A.carolinensis:196 C.trachomatis:196

G1KM69              	100.00%		O84065              	100.00%
Bootstrap support for G1KM69 as seed ortholog is 100%.
Bootstrap support for O84065 as seed ortholog is 100%.

Group of orthologs #77. Best score 191 bits
Score difference with first non-orthologous sequence - A.carolinensis:5 C.trachomatis:191

H9GAW2              	100.00%		O84345              	100.00%
H9G7Q2              	67.14%		
H9GUF5              	44.29%		
H9GK58              	35.87%		
Bootstrap support for H9GAW2 as seed ortholog is 56%.
Alternative seed ortholog is H9G9G4 (5 bits away from this cluster)
Bootstrap support for O84345 as seed ortholog is 100%.

Group of orthologs #78. Best score 191 bits
Score difference with first non-orthologous sequence - A.carolinensis:63 C.trachomatis:191

H9GMS0              	100.00%		P38004              	100.00%
Bootstrap support for H9GMS0 as seed ortholog is 98%.
Bootstrap support for P38004 as seed ortholog is 100%.

Group of orthologs #79. Best score 190 bits
Score difference with first non-orthologous sequence - A.carolinensis:190 C.trachomatis:190

G1KJL8              	100.00%		O84812              	100.00%
G1KHA3              	58.99%		
H9GBN3              	6.53%		
Bootstrap support for G1KJL8 as seed ortholog is 100%.
Bootstrap support for O84812 as seed ortholog is 100%.

Group of orthologs #80. Best score 189 bits
Score difference with first non-orthologous sequence - A.carolinensis:189 C.trachomatis:189

G1K8S0              	100.00%		O84402              	100.00%
H9G8N8              	13.97%		
Bootstrap support for G1K8S0 as seed ortholog is 100%.
Bootstrap support for O84402 as seed ortholog is 100%.

Group of orthologs #81. Best score 189 bits
Score difference with first non-orthologous sequence - A.carolinensis:189 C.trachomatis:100

G1KMS6              	100.00%		O84755              	100.00%
G1KKR0              	66.14%		
Bootstrap support for G1KMS6 as seed ortholog is 100%.
Bootstrap support for O84755 as seed ortholog is 94%.

Group of orthologs #82. Best score 188 bits
Score difference with first non-orthologous sequence - A.carolinensis:77 C.trachomatis:188

G1KM26              	100.00%		O84247              	100.00%
Bootstrap support for G1KM26 as seed ortholog is 99%.
Bootstrap support for O84247 as seed ortholog is 100%.

Group of orthologs #83. Best score 186 bits
Score difference with first non-orthologous sequence - A.carolinensis:53 C.trachomatis:127

H9GKW0              	100.00%		O84859              	100.00%
Bootstrap support for H9GKW0 as seed ortholog is 94%.
Bootstrap support for O84859 as seed ortholog is 99%.

Group of orthologs #84. Best score 183 bits
Score difference with first non-orthologous sequence - A.carolinensis:96 C.trachomatis:183

H9G7G6              	100.00%		O84608              	100.00%
G1KQP3              	58.72%		
G1KGP1              	45.87%		
Bootstrap support for H9G7G6 as seed ortholog is 99%.
Bootstrap support for O84608 as seed ortholog is 100%.

Group of orthologs #85. Best score 182 bits
Score difference with first non-orthologous sequence - A.carolinensis:182 C.trachomatis:182

H9GAG2              	100.00%		O84332              	100.00%
Bootstrap support for H9GAG2 as seed ortholog is 100%.
Bootstrap support for O84332 as seed ortholog is 100%.

Group of orthologs #86. Best score 177 bits
Score difference with first non-orthologous sequence - A.carolinensis:177 C.trachomatis:177

G1KTV2              	100.00%		P18584              	100.00%
H9GID9              	38.79%		
H9GES8              	36.02%		
H9GE75              	22.42%		
Bootstrap support for G1KTV2 as seed ortholog is 100%.
Bootstrap support for P18584 as seed ortholog is 100%.

Group of orthologs #87. Best score 174 bits
Score difference with first non-orthologous sequence - A.carolinensis:174 C.trachomatis:90

G1KDP4              	100.00%		O84055              	100.00%
Bootstrap support for G1KDP4 as seed ortholog is 100%.
Bootstrap support for O84055 as seed ortholog is 99%.

Group of orthologs #88. Best score 171 bits
Score difference with first non-orthologous sequence - A.carolinensis:171 C.trachomatis:171

G1KLK2              	100.00%		O84383              	100.00%
Bootstrap support for G1KLK2 as seed ortholog is 100%.
Bootstrap support for O84383 as seed ortholog is 100%.

Group of orthologs #89. Best score 165 bits
Score difference with first non-orthologous sequence - A.carolinensis:32 C.trachomatis:165

G1KT22              	100.00%		O84676              	100.00%
                    	       		O84722              	12.21%
Bootstrap support for G1KT22 as seed ortholog is 79%.
Bootstrap support for O84676 as seed ortholog is 100%.

Group of orthologs #90. Best score 159 bits
Score difference with first non-orthologous sequence - A.carolinensis:6 C.trachomatis:159

G1KKY2              	100.00%		O84049              	100.00%
Bootstrap support for G1KKY2 as seed ortholog is 55%.
Alternative seed ortholog is H9GAV6 (6 bits away from this cluster)
Bootstrap support for O84049 as seed ortholog is 100%.

Group of orthologs #91. Best score 159 bits
Score difference with first non-orthologous sequence - A.carolinensis:159 C.trachomatis:159

G1KVL1              	100.00%		O84734              	100.00%
Bootstrap support for G1KVL1 as seed ortholog is 100%.
Bootstrap support for O84734 as seed ortholog is 100%.

Group of orthologs #92. Best score 155 bits
Score difference with first non-orthologous sequence - A.carolinensis:155 C.trachomatis:155

H9GT82              	100.00%		O84720              	100.00%
H9G570              	25.55%		
Bootstrap support for H9GT82 as seed ortholog is 100%.
Bootstrap support for O84720 as seed ortholog is 100%.

Group of orthologs #93. Best score 155 bits
Score difference with first non-orthologous sequence - A.carolinensis:155 C.trachomatis:155

G1KAH1              	100.00%		O84874              	100.00%
Bootstrap support for G1KAH1 as seed ortholog is 100%.
Bootstrap support for O84874 as seed ortholog is 100%.

Group of orthologs #94. Best score 155 bits
Score difference with first non-orthologous sequence - A.carolinensis:155 C.trachomatis:155

H9GFV7              	100.00%		O84456              	100.00%
Bootstrap support for H9GFV7 as seed ortholog is 100%.
Bootstrap support for O84456 as seed ortholog is 100%.

Group of orthologs #95. Best score 154 bits
Score difference with first non-orthologous sequence - A.carolinensis:154 C.trachomatis:154

G1KKI6              	100.00%		O84123              	100.00%
Bootstrap support for G1KKI6 as seed ortholog is 100%.
Bootstrap support for O84123 as seed ortholog is 100%.

Group of orthologs #96. Best score 153 bits
Score difference with first non-orthologous sequence - A.carolinensis:153 C.trachomatis:32

G1KFC2              	100.00%		O84260              	100.00%
G1KFF5              	8.02%		
Bootstrap support for G1KFC2 as seed ortholog is 100%.
Bootstrap support for O84260 as seed ortholog is 80%.

Group of orthologs #97. Best score 148 bits
Score difference with first non-orthologous sequence - A.carolinensis:148 C.trachomatis:148

H9G5U9              	100.00%		O84727              	100.00%
H9G5Z0              	76.86%		
G1KLQ6              	38.83%		
Bootstrap support for H9G5U9 as seed ortholog is 100%.
Bootstrap support for O84727 as seed ortholog is 100%.

Group of orthologs #98. Best score 148 bits
Score difference with first non-orthologous sequence - A.carolinensis:148 C.trachomatis:148

G1KQY1              	100.00%		O84752              	100.00%
Bootstrap support for G1KQY1 as seed ortholog is 100%.
Bootstrap support for O84752 as seed ortholog is 100%.

Group of orthologs #99. Best score 146 bits
Score difference with first non-orthologous sequence - A.carolinensis:146 C.trachomatis:146

G1KQY6              	100.00%		O84234              	100.00%
H9G9L7              	100.00%		
G1KQ50              	41.67%		
G1KR76              	39.35%		
H9G7K9              	35.48%		
G1KNV1              	33.42%		
G1K866              	33.25%		
G1KJU7              	33.25%		
G1KNG2              	32.82%		
G1K865              	32.22%		
H9GIA8              	30.93%		
H9GNM7              	30.58%		
G1KJK5              	27.41%		
G1KIB2              	27.23%		
G1KMN4              	23.11%		
G1KKT4              	21.21%		
G1K9X3              	19.24%		
G1KY99              	19.07%		
H9GL13              	18.47%		
H9GPB9              	13.71%		
H9GF91              	12.03%		
Bootstrap support for G1KQY6 as seed ortholog is 100%.
Bootstrap support for H9G9L7 as seed ortholog is 100%.
Bootstrap support for O84234 as seed ortholog is 100%.

Group of orthologs #100. Best score 144 bits
Score difference with first non-orthologous sequence - A.carolinensis:50 C.trachomatis:144

G1KPS6              	100.00%		O84200              	100.00%
Bootstrap support for G1KPS6 as seed ortholog is 89%.
Bootstrap support for O84200 as seed ortholog is 100%.

Group of orthologs #101. Best score 144 bits
Score difference with first non-orthologous sequence - A.carolinensis:144 C.trachomatis:144

H9G976              	100.00%		O84632              	100.00%
Bootstrap support for H9G976 as seed ortholog is 100%.
Bootstrap support for O84632 as seed ortholog is 100%.

Group of orthologs #102. Best score 143 bits
Score difference with first non-orthologous sequence - A.carolinensis:143 C.trachomatis:143

G1KRS6              	100.00%		O84241              	100.00%
Bootstrap support for G1KRS6 as seed ortholog is 100%.
Bootstrap support for O84241 as seed ortholog is 100%.

Group of orthologs #103. Best score 143 bits
Score difference with first non-orthologous sequence - A.carolinensis:89 C.trachomatis:143

H9GDH3              	100.00%		O84589              	100.00%
Bootstrap support for H9GDH3 as seed ortholog is 98%.
Bootstrap support for O84589 as seed ortholog is 100%.

Group of orthologs #104. Best score 136 bits
Score difference with first non-orthologous sequence - A.carolinensis:136 C.trachomatis:136

H9GFA7              	100.00%		O84492              	100.00%
Bootstrap support for H9GFA7 as seed ortholog is 100%.
Bootstrap support for O84492 as seed ortholog is 100%.

Group of orthologs #105. Best score 133 bits
Score difference with first non-orthologous sequence - A.carolinensis:133 C.trachomatis:133

G1KK12              	100.00%		O84732              	100.00%
G1KJ35              	80.32%		
G1KJE3              	80.03%		
G1KM20              	79.17%		
H9GGK6              	61.97%		
H9GUW4              	7.85%		
G1KAI3              	7.81%		
H9GN00              	7.38%		
H9GMX2              	7.18%		
H9GAI7              	6.75%		
H9GG73              	6.66%		
H9GDC9              	6.56%		
L7N020              	6.08%		
Bootstrap support for G1KK12 as seed ortholog is 100%.
Bootstrap support for O84732 as seed ortholog is 100%.

Group of orthologs #106. Best score 132 bits
Score difference with first non-orthologous sequence - A.carolinensis:132 C.trachomatis:132

G1K8A5              	100.00%		O84835              	100.00%
G1KIC0              	100.00%		
Bootstrap support for G1K8A5 as seed ortholog is 100%.
Bootstrap support for G1KIC0 as seed ortholog is 100%.
Bootstrap support for O84835 as seed ortholog is 100%.

Group of orthologs #107. Best score 130 bits
Score difference with first non-orthologous sequence - A.carolinensis:130 C.trachomatis:130

G1KRF7              	100.00%		O84864              	100.00%
G1K940              	10.56%		
G1KFT5              	9.63%		
H9GTE3              	6.73%		
H9G3S8              	6.21%		
G1KRJ0              	6.21%		
G1KBS4              	5.49%		
Bootstrap support for G1KRF7 as seed ortholog is 100%.
Bootstrap support for O84864 as seed ortholog is 100%.

Group of orthologs #108. Best score 127 bits
Score difference with first non-orthologous sequence - A.carolinensis:38 C.trachomatis:127

G1KDM8              	100.00%		O84530              	100.00%
Bootstrap support for G1KDM8 as seed ortholog is 87%.
Bootstrap support for O84530 as seed ortholog is 100%.

Group of orthologs #109. Best score 126 bits
Score difference with first non-orthologous sequence - A.carolinensis:39 C.trachomatis:126

G1KC24              	100.00%		O84130              	100.00%
G1KI68              	16.82%		
Bootstrap support for G1KC24 as seed ortholog is 86%.
Bootstrap support for O84130 as seed ortholog is 100%.

Group of orthologs #110. Best score 126 bits
Score difference with first non-orthologous sequence - A.carolinensis:126 C.trachomatis:126

H9GB70              	100.00%		O84478              	100.00%
Bootstrap support for H9GB70 as seed ortholog is 100%.
Bootstrap support for O84478 as seed ortholog is 100%.

Group of orthologs #111. Best score 123 bits
Score difference with first non-orthologous sequence - A.carolinensis:123 C.trachomatis:123

H9GAM7              	100.00%		O84274              	100.00%
Bootstrap support for H9GAM7 as seed ortholog is 100%.
Bootstrap support for O84274 as seed ortholog is 100%.

Group of orthologs #112. Best score 117 bits
Score difference with first non-orthologous sequence - A.carolinensis:68 C.trachomatis:117

H9G839              	100.00%		P66370              	100.00%
Bootstrap support for H9G839 as seed ortholog is 99%.
Bootstrap support for P66370 as seed ortholog is 100%.

Group of orthologs #113. Best score 116 bits
Score difference with first non-orthologous sequence - A.carolinensis:37 C.trachomatis:116

G1KAF8              	100.00%		O84508              	100.00%
Bootstrap support for G1KAF8 as seed ortholog is 97%.
Bootstrap support for O84508 as seed ortholog is 100%.

Group of orthologs #114. Best score 116 bits
Score difference with first non-orthologous sequence - A.carolinensis:116 C.trachomatis:116

H9G668              	100.00%		O84771              	100.00%
Bootstrap support for H9G668 as seed ortholog is 100%.
Bootstrap support for O84771 as seed ortholog is 100%.

Group of orthologs #115. Best score 115 bits
Score difference with first non-orthologous sequence - A.carolinensis:115 C.trachomatis:115

H9GA94              	100.00%		O84391              	100.00%
Bootstrap support for H9GA94 as seed ortholog is 100%.
Bootstrap support for O84391 as seed ortholog is 100%.

Group of orthologs #116. Best score 111 bits
Score difference with first non-orthologous sequence - A.carolinensis:111 C.trachomatis:111

H9GMH9              	100.00%		O84301              	100.00%
Bootstrap support for H9GMH9 as seed ortholog is 100%.
Bootstrap support for O84301 as seed ortholog is 100%.

Group of orthologs #117. Best score 110 bits
Score difference with first non-orthologous sequence - A.carolinensis:110 C.trachomatis:110

H9GF12              	100.00%		O84649              	100.00%
H9G5D6              	14.72%		
Bootstrap support for H9GF12 as seed ortholog is 100%.
Bootstrap support for O84649 as seed ortholog is 100%.

Group of orthologs #118. Best score 108 bits
Score difference with first non-orthologous sequence - A.carolinensis:108 C.trachomatis:108

G1KAJ4              	100.00%		O84215              	100.00%
Bootstrap support for G1KAJ4 as seed ortholog is 100%.
Bootstrap support for O84215 as seed ortholog is 100%.

Group of orthologs #119. Best score 108 bits
Score difference with first non-orthologous sequence - A.carolinensis:108 C.trachomatis:108

H9GDC5              	100.00%		P55137              	100.00%
Bootstrap support for H9GDC5 as seed ortholog is 100%.
Bootstrap support for P55137 as seed ortholog is 100%.

Group of orthologs #120. Best score 106 bits
Score difference with first non-orthologous sequence - A.carolinensis:106 C.trachomatis:106

H9GG32              	100.00%		O84350              	100.00%
Bootstrap support for H9GG32 as seed ortholog is 100%.
Bootstrap support for O84350 as seed ortholog is 100%.

Group of orthologs #121. Best score 104 bits
Score difference with first non-orthologous sequence - A.carolinensis:58 C.trachomatis:104

G1KFD7              	100.00%		P0CE06              	100.00%
Bootstrap support for G1KFD7 as seed ortholog is 98%.
Bootstrap support for P0CE06 as seed ortholog is 100%.

Group of orthologs #122. Best score 102 bits
Score difference with first non-orthologous sequence - A.carolinensis:13 C.trachomatis:102

G1KF93              	100.00%		O84599              	100.00%
Bootstrap support for G1KF93 as seed ortholog is 63%.
Alternative seed ortholog is G1KJK7 (13 bits away from this cluster)
Bootstrap support for O84599 as seed ortholog is 100%.

Group of orthologs #123. Best score 102 bits
Score difference with first non-orthologous sequence - A.carolinensis:48 C.trachomatis:102

H9GF07              	100.00%		O84096              	100.00%
Bootstrap support for H9GF07 as seed ortholog is 94%.
Bootstrap support for O84096 as seed ortholog is 100%.

Group of orthologs #124. Best score 100 bits
Score difference with first non-orthologous sequence - A.carolinensis:100 C.trachomatis:100

G1KFV3              	100.00%		O84033              	100.00%
Bootstrap support for G1KFV3 as seed ortholog is 100%.
Bootstrap support for O84033 as seed ortholog is 100%.

Group of orthologs #125. Best score 97 bits
Score difference with first non-orthologous sequence - A.carolinensis:97 C.trachomatis:97

G1KR54              	100.00%		O84782              	100.00%
G1KKY7              	17.55%		
G1KFQ1              	15.92%		
G1KTP4              	13.20%		
G1K9C4              	6.94%		
Bootstrap support for G1KR54 as seed ortholog is 100%.
Bootstrap support for O84782 as seed ortholog is 100%.

Group of orthologs #126. Best score 97 bits
Score difference with first non-orthologous sequence - A.carolinensis:5 C.trachomatis:97

H9GJF6              	100.00%		O84442              	100.00%
G1KJY1              	14.38%		
H9GDL4              	6.22%		
Bootstrap support for H9GJF6 as seed ortholog is 51%.
Alternative seed ortholog is H9GHB7 (5 bits away from this cluster)
Bootstrap support for O84442 as seed ortholog is 100%.

Group of orthologs #127. Best score 97 bits
Score difference with first non-orthologous sequence - A.carolinensis:97 C.trachomatis:97

G1KU46              	100.00%		O84212              	100.00%
H9GE87              	5.60%		
Bootstrap support for G1KU46 as seed ortholog is 100%.
Bootstrap support for O84212 as seed ortholog is 100%.

Group of orthologs #128. Best score 97 bits
Score difference with first non-orthologous sequence - A.carolinensis:28 C.trachomatis:97

H9GA36              	100.00%		P0CE03              	100.00%
Bootstrap support for H9GA36 as seed ortholog is 94%.
Bootstrap support for P0CE03 as seed ortholog is 100%.

Group of orthologs #129. Best score 96 bits
Score difference with first non-orthologous sequence - A.carolinensis:8 C.trachomatis:96

G1KDU6              	100.00%		O84358              	100.00%
Bootstrap support for G1KDU6 as seed ortholog is 56%.
Alternative seed ortholog is G1KHV6 (8 bits away from this cluster)
Bootstrap support for O84358 as seed ortholog is 100%.

Group of orthologs #130. Best score 95 bits
Score difference with first non-orthologous sequence - A.carolinensis:95 C.trachomatis:95

G1K9F1              	100.00%		O84390              	100.00%
H9G6Z1              	22.42%		
Bootstrap support for G1K9F1 as seed ortholog is 100%.
Bootstrap support for O84390 as seed ortholog is 100%.

Group of orthologs #131. Best score 95 bits
Score difference with first non-orthologous sequence - A.carolinensis:14 C.trachomatis:95

H9GKD2              	100.00%		O84665              	100.00%
Bootstrap support for H9GKD2 as seed ortholog is 64%.
Alternative seed ortholog is H9G3D2 (14 bits away from this cluster)
Bootstrap support for O84665 as seed ortholog is 100%.

Group of orthologs #132. Best score 90 bits
Score difference with first non-orthologous sequence - A.carolinensis:90 C.trachomatis:90

G1KJD2              	100.00%		O84719              	100.00%
G1KXW7              	75.43%		
G1KQ41              	73.88%		
Bootstrap support for G1KJD2 as seed ortholog is 100%.
Bootstrap support for O84719 as seed ortholog is 100%.

Group of orthologs #133. Best score 90 bits
Score difference with first non-orthologous sequence - A.carolinensis:90 C.trachomatis:90

G1K9Q3              	100.00%		O84533              	100.00%
Bootstrap support for G1K9Q3 as seed ortholog is 100%.
Bootstrap support for O84533 as seed ortholog is 100%.

Group of orthologs #134. Best score 90 bits
Score difference with first non-orthologous sequence - A.carolinensis:90 C.trachomatis:90

G1KTL7              	100.00%		O84843              	100.00%
Bootstrap support for G1KTL7 as seed ortholog is 100%.
Bootstrap support for O84843 as seed ortholog is 100%.

Group of orthologs #135. Best score 90 bits
Score difference with first non-orthologous sequence - A.carolinensis:21 C.trachomatis:90

H9GKP4              	100.00%		O84469              	100.00%
Bootstrap support for H9GKP4 as seed ortholog is 70%.
Alternative seed ortholog is H9G3C7 (21 bits away from this cluster)
Bootstrap support for O84469 as seed ortholog is 100%.

Group of orthologs #136. Best score 88 bits
Score difference with first non-orthologous sequence - A.carolinensis:88 C.trachomatis:18

H9GBD1              	100.00%		O84154              	100.00%
G1KVJ8              	25.86%		
Bootstrap support for H9GBD1 as seed ortholog is 100%.
Bootstrap support for O84154 as seed ortholog is 75%.

Group of orthologs #137. Best score 88 bits
Score difference with first non-orthologous sequence - A.carolinensis:88 C.trachomatis:88

H9G6W9              	100.00%		O84435              	100.00%
Bootstrap support for H9G6W9 as seed ortholog is 100%.
Bootstrap support for O84435 as seed ortholog is 100%.

Group of orthologs #138. Best score 87 bits
Score difference with first non-orthologous sequence - A.carolinensis:87 C.trachomatis:87

G1KEF8              	100.00%		O84415              	100.00%
                    	       		O84710              	9.10%
Bootstrap support for G1KEF8 as seed ortholog is 100%.
Bootstrap support for O84415 as seed ortholog is 100%.

Group of orthologs #139. Best score 87 bits
Score difference with first non-orthologous sequence - A.carolinensis:87 C.trachomatis:87

G1KGM3              	100.00%		O84499              	100.00%
Bootstrap support for G1KGM3 as seed ortholog is 100%.
Bootstrap support for O84499 as seed ortholog is 100%.

Group of orthologs #140. Best score 87 bits
Score difference with first non-orthologous sequence - A.carolinensis:87 C.trachomatis:87

H9GMC5              	100.00%		O84463              	100.00%
Bootstrap support for H9GMC5 as seed ortholog is 100%.
Bootstrap support for O84463 as seed ortholog is 100%.

Group of orthologs #141. Best score 86 bits
Score difference with first non-orthologous sequence - A.carolinensis:86 C.trachomatis:86

G1KA62              	100.00%		P36424              	100.00%
G1KRB1              	30.03%		
Bootstrap support for G1KA62 as seed ortholog is 100%.
Bootstrap support for P36424 as seed ortholog is 100%.

Group of orthologs #142. Best score 85 bits
Score difference with first non-orthologous sequence - A.carolinensis:85 C.trachomatis:85

G1KKX6              	100.00%		O84865              	100.00%
Bootstrap support for G1KKX6 as seed ortholog is 100%.
Bootstrap support for O84865 as seed ortholog is 100%.

Group of orthologs #143. Best score 84 bits
Score difference with first non-orthologous sequence - A.carolinensis:25 C.trachomatis:84

G1KTQ4              	100.00%		O84822              	100.00%
Bootstrap support for G1KTQ4 as seed ortholog is 69%.
Alternative seed ortholog is G1KHK5 (25 bits away from this cluster)
Bootstrap support for O84822 as seed ortholog is 100%.

Group of orthologs #144. Best score 84 bits
Score difference with first non-orthologous sequence - A.carolinensis:84 C.trachomatis:84

H9G9U7              	100.00%		O84294              	100.00%
Bootstrap support for H9G9U7 as seed ortholog is 100%.
Bootstrap support for O84294 as seed ortholog is 100%.

Group of orthologs #145. Best score 83 bits
Score difference with first non-orthologous sequence - A.carolinensis:83 C.trachomatis:83

H9G7H1              	100.00%		O84357              	100.00%
Bootstrap support for H9G7H1 as seed ortholog is 100%.
Bootstrap support for O84357 as seed ortholog is 100%.

Group of orthologs #146. Best score 81 bits
Score difference with first non-orthologous sequence - A.carolinensis:81 C.trachomatis:81

H9G473              	100.00%		O84338              	100.00%
H9GNG0              	23.03%		
H9GCW3              	20.84%		
G1KCC9              	5.12%		
Bootstrap support for H9G473 as seed ortholog is 100%.
Bootstrap support for O84338 as seed ortholog is 100%.

Group of orthologs #147. Best score 81 bits
Score difference with first non-orthologous sequence - A.carolinensis:81 C.trachomatis:81

G1KN68              	100.00%		O84686              	100.00%
Bootstrap support for G1KN68 as seed ortholog is 100%.
Bootstrap support for O84686 as seed ortholog is 100%.

Group of orthologs #148. Best score 79 bits
Score difference with first non-orthologous sequence - A.carolinensis:31 C.trachomatis:79

G1KM83              	100.00%		O84781              	100.00%
G1KB02              	71.28%		
H9GFT0              	63.32%		
G1KD36              	17.63%		
H9GJC5              	17.34%		
Bootstrap support for G1KM83 as seed ortholog is 78%.
Bootstrap support for O84781 as seed ortholog is 100%.

Group of orthologs #149. Best score 79 bits
Score difference with first non-orthologous sequence - A.carolinensis:79 C.trachomatis:79

G1KI22              	100.00%		O84307              	100.00%
G1KUJ8              	48.27%		
G1KP65              	34.08%		
H9GM07              	28.69%		
Bootstrap support for G1KI22 as seed ortholog is 100%.
Bootstrap support for O84307 as seed ortholog is 100%.

Group of orthologs #150. Best score 79 bits
Score difference with first non-orthologous sequence - A.carolinensis:79 C.trachomatis:79

H9GJ52              	100.00%		O84611              	100.00%
Bootstrap support for H9GJ52 as seed ortholog is 100%.
Bootstrap support for O84611 as seed ortholog is 100%.

Group of orthologs #151. Best score 77 bits
Score difference with first non-orthologous sequence - A.carolinensis:77 C.trachomatis:77

G1KMW3              	100.00%		O84468              	100.00%
Bootstrap support for G1KMW3 as seed ortholog is 100%.
Bootstrap support for O84468 as seed ortholog is 100%.

Group of orthologs #152. Best score 77 bits
Score difference with first non-orthologous sequence - A.carolinensis:77 C.trachomatis:77

G1KMX9              	100.00%		O84547              	100.00%
Bootstrap support for G1KMX9 as seed ortholog is 100%.
Bootstrap support for O84547 as seed ortholog is 100%.

Group of orthologs #153. Best score 76 bits
Score difference with first non-orthologous sequence - A.carolinensis:76 C.trachomatis:76

H9G8G7              	100.00%		O84750              	100.00%
Bootstrap support for H9G8G7 as seed ortholog is 100%.
Bootstrap support for O84750 as seed ortholog is 100%.

Group of orthologs #154. Best score 75 bits
Score difference with first non-orthologous sequence - A.carolinensis:75 C.trachomatis:75

H9GEZ1              	100.00%		O84127              	100.00%
Bootstrap support for H9GEZ1 as seed ortholog is 100%.
Bootstrap support for O84127 as seed ortholog is 100%.

Group of orthologs #155. Best score 74 bits
Score difference with first non-orthologous sequence - A.carolinensis:74 C.trachomatis:74

H9G9R7              	100.00%		O84189              	100.00%
Bootstrap support for H9G9R7 as seed ortholog is 100%.
Bootstrap support for O84189 as seed ortholog is 100%.

Group of orthologs #156. Best score 73 bits
Score difference with first non-orthologous sequence - A.carolinensis:73 C.trachomatis:73

H9G7R3              	100.00%		O84036              	100.00%
Bootstrap support for H9G7R3 as seed ortholog is 100%.
Bootstrap support for O84036 as seed ortholog is 100%.

Group of orthologs #157. Best score 72 bits
Score difference with first non-orthologous sequence - A.carolinensis:72 C.trachomatis:72

G1KWS1              	100.00%		O84792              	100.00%
Bootstrap support for G1KWS1 as seed ortholog is 100%.
Bootstrap support for O84792 as seed ortholog is 100%.

Group of orthologs #158. Best score 71 bits
Score difference with first non-orthologous sequence - A.carolinensis:71 C.trachomatis:71

G1KQT0              	100.00%		O84650              	100.00%
G1KJJ5              	15.18%		
H9GFN5              	8.77%		
Bootstrap support for G1KQT0 as seed ortholog is 100%.
Bootstrap support for O84650 as seed ortholog is 100%.

Group of orthologs #159. Best score 71 bits
Score difference with first non-orthologous sequence - A.carolinensis:71 C.trachomatis:71

H9GEK8              	100.00%		O84108              	100.00%
Bootstrap support for H9GEK8 as seed ortholog is 100%.
Bootstrap support for O84108 as seed ortholog is 100%.

Group of orthologs #160. Best score 71 bits
Score difference with first non-orthologous sequence - A.carolinensis:71 C.trachomatis:71

H9GEJ4              	100.00%		O84284              	100.00%
Bootstrap support for H9GEJ4 as seed ortholog is 100%.
Bootstrap support for O84284 as seed ortholog is 100%.

Group of orthologs #161. Best score 68 bits
Score difference with first non-orthologous sequence - A.carolinensis:17 C.trachomatis:68

G1KN99              	100.00%		P0CD81              	100.00%
Bootstrap support for G1KN99 as seed ortholog is 76%.
Bootstrap support for P0CD81 as seed ortholog is 100%.

Group of orthologs #162. Best score 67 bits
Score difference with first non-orthologous sequence - A.carolinensis:67 C.trachomatis:67

H9GJI5              	100.00%		O84544              	100.00%
Bootstrap support for H9GJI5 as seed ortholog is 100%.
Bootstrap support for O84544 as seed ortholog is 100%.

Group of orthologs #163. Best score 67 bits
Score difference with first non-orthologous sequence - A.carolinensis:67 C.trachomatis:67

H9GN10              	100.00%		O84595              	100.00%
Bootstrap support for H9GN10 as seed ortholog is 100%.
Bootstrap support for O84595 as seed ortholog is 100%.

Group of orthologs #164. Best score 65 bits
Score difference with first non-orthologous sequence - A.carolinensis:65 C.trachomatis:65

H9G6W8              	100.00%		P0CE04              	100.00%
Bootstrap support for H9G6W8 as seed ortholog is 100%.
Bootstrap support for P0CE04 as seed ortholog is 100%.

Group of orthologs #165. Best score 65 bits
Score difference with first non-orthologous sequence - A.carolinensis:65 C.trachomatis:65

H9GF82              	100.00%		P0CD84              	100.00%
Bootstrap support for H9GF82 as seed ortholog is 100%.
Bootstrap support for P0CD84 as seed ortholog is 100%.

Group of orthologs #166. Best score 65 bits
Score difference with first non-orthologous sequence - A.carolinensis:65 C.trachomatis:65

H9GS38              	100.00%		P0C0Z8              	100.00%
Bootstrap support for H9GS38 as seed ortholog is 100%.
Bootstrap support for P0C0Z8 as seed ortholog is 100%.

Group of orthologs #167. Best score 64 bits
Score difference with first non-orthologous sequence - A.carolinensis:64 C.trachomatis:64

G1KPL2              	100.00%		O84128              	100.00%
Bootstrap support for G1KPL2 as seed ortholog is 100%.
Bootstrap support for O84128 as seed ortholog is 100%.

Group of orthologs #168. Best score 63 bits
Score difference with first non-orthologous sequence - A.carolinensis:63 C.trachomatis:63

H9G8J0              	100.00%		P26623              	100.00%
G1KV70              	73.42%		
H9G457              	9.81%		
G1KLB9              	6.01%		
Bootstrap support for H9G8J0 as seed ortholog is 100%.
Bootstrap support for P26623 as seed ortholog is 100%.

Group of orthologs #169. Best score 63 bits
Score difference with first non-orthologous sequence - A.carolinensis:63 C.trachomatis:63

G1KJH6              	100.00%		P0CD83              	100.00%
Bootstrap support for G1KJH6 as seed ortholog is 100%.
Bootstrap support for P0CD83 as seed ortholog is 100%.

Group of orthologs #170. Best score 63 bits
Score difference with first non-orthologous sequence - A.carolinensis:63 C.trachomatis:63

H9GEU5              	100.00%		O84842              	100.00%
Bootstrap support for H9GEU5 as seed ortholog is 100%.
Bootstrap support for O84842 as seed ortholog is 100%.

Group of orthologs #171. Best score 62 bits
Score difference with first non-orthologous sequence - A.carolinensis:62 C.trachomatis:62

G1KPC5              	100.00%		O84218              	100.00%
H9GCM6              	37.89%		
G1KKD4              	37.89%		
G1KNK4              	27.89%		
Bootstrap support for G1KPC5 as seed ortholog is 100%.
Bootstrap support for O84218 as seed ortholog is 100%.

Group of orthologs #172. Best score 62 bits
Score difference with first non-orthologous sequence - A.carolinensis:62 C.trachomatis:62

G1KHF7              	100.00%		O84633              	100.00%
Bootstrap support for G1KHF7 as seed ortholog is 100%.
Bootstrap support for O84633 as seed ortholog is 100%.

Group of orthologs #173. Best score 61 bits
Score difference with first non-orthologous sequence - A.carolinensis:61 C.trachomatis:61

G1KDU3              	100.00%		P66123              	100.00%
Bootstrap support for G1KDU3 as seed ortholog is 100%.
Bootstrap support for P66123 as seed ortholog is 100%.

Group of orthologs #174. Best score 60 bits
Score difference with first non-orthologous sequence - A.carolinensis:18 C.trachomatis:60

G1K9B3              	100.00%		O84395              	100.00%
Bootstrap support for G1K9B3 as seed ortholog is 65%.
Alternative seed ortholog is H9GMI9 (18 bits away from this cluster)
Bootstrap support for O84395 as seed ortholog is 100%.

Group of orthologs #175. Best score 59 bits
Score difference with first non-orthologous sequence - A.carolinensis:59 C.trachomatis:59

H9GCK9              	100.00%		O84379              	100.00%
H9G6N1              	60.97%		
H9GGF1              	43.28%		
G1KK17              	40.22%		
H9G4U3              	40.22%		
G1KNA9              	32.11%		
Bootstrap support for H9GCK9 as seed ortholog is 100%.
Bootstrap support for O84379 as seed ortholog is 100%.

Group of orthologs #176. Best score 59 bits
Score difference with first non-orthologous sequence - A.carolinensis:59 C.trachomatis:59

H9GDL9              	100.00%		O84532              	100.00%
Bootstrap support for H9GDL9 as seed ortholog is 100%.
Bootstrap support for O84532 as seed ortholog is 100%.

Group of orthologs #177. Best score 59 bits
Score difference with first non-orthologous sequence - A.carolinensis:59 C.trachomatis:59

H9GP33              	100.00%		O84139              	100.00%
Bootstrap support for H9GP33 as seed ortholog is 100%.
Bootstrap support for O84139 as seed ortholog is 100%.

Group of orthologs #178. Best score 58 bits
Score difference with first non-orthologous sequence - A.carolinensis:58 C.trachomatis:58

G1KKG5              	100.00%		O84221              	100.00%
Bootstrap support for G1KKG5 as seed ortholog is 100%.
Bootstrap support for O84221 as seed ortholog is 100%.

Group of orthologs #179. Best score 57 bits
Score difference with first non-orthologous sequence - A.carolinensis:57 C.trachomatis:57

G1K8T7              	100.00%		O84503              	100.00%
Bootstrap support for G1K8T7 as seed ortholog is 100%.
Bootstrap support for O84503 as seed ortholog is 100%.

Group of orthologs #180. Best score 56 bits
Score difference with first non-orthologous sequence - A.carolinensis:56 C.trachomatis:56

G1K988              	100.00%		P0CE02              	100.00%
Bootstrap support for G1K988 as seed ortholog is 100%.
Bootstrap support for P0CE02 as seed ortholog is 100%.

Group of orthologs #181. Best score 56 bits
Score difference with first non-orthologous sequence - A.carolinensis:56 C.trachomatis:56

H9G605              	100.00%		O84527              	100.00%
Bootstrap support for H9G605 as seed ortholog is 100%.
Bootstrap support for O84527 as seed ortholog is 100%.

Group of orthologs #182. Best score 55 bits
Score difference with first non-orthologous sequence - A.carolinensis:55 C.trachomatis:55

H9GIE7              	100.00%		O84239              	100.00%
Bootstrap support for H9GIE7 as seed ortholog is 100%.
Bootstrap support for O84239 as seed ortholog is 100%.

Group of orthologs #183. Best score 55 bits
Score difference with first non-orthologous sequence - A.carolinensis:55 C.trachomatis:55

H9GI82              	100.00%		O84655              	100.00%
Bootstrap support for H9GI82 as seed ortholog is 100%.
Bootstrap support for O84655 as seed ortholog is 100%.

Group of orthologs #184. Best score 54 bits
Score difference with first non-orthologous sequence - A.carolinensis:54 C.trachomatis:54

G1KGR0              	100.00%		O84496              	100.00%
G1KPI0              	22.32%		
H9G615              	10.27%		
Bootstrap support for G1KGR0 as seed ortholog is 100%.
Bootstrap support for O84496 as seed ortholog is 100%.

Group of orthologs #185. Best score 54 bits
Score difference with first non-orthologous sequence - A.carolinensis:3 C.trachomatis:54

G1KFX0              	100.00%		O84689              	100.00%
Bootstrap support for G1KFX0 as seed ortholog is 56%.
Alternative seed ortholog is H9GC07 (3 bits away from this cluster)
Bootstrap support for O84689 as seed ortholog is 100%.

Group of orthologs #186. Best score 54 bits
Score difference with first non-orthologous sequence - A.carolinensis:54 C.trachomatis:54

G1KP02              	100.00%		O84774              	100.00%
Bootstrap support for G1KP02 as seed ortholog is 100%.
Bootstrap support for O84774 as seed ortholog is 100%.

Group of orthologs #187. Best score 52 bits
Score difference with first non-orthologous sequence - A.carolinensis:52 C.trachomatis:52

G1KHF6              	100.00%		P0CD80              	100.00%
H9GKC7              	44.41%		
Bootstrap support for G1KHF6 as seed ortholog is 100%.
Bootstrap support for P0CD80 as seed ortholog is 100%.

Group of orthologs #188. Best score 51 bits
Score difference with first non-orthologous sequence - A.carolinensis:51 C.trachomatis:51

H9G6C9              	100.00%		O84408              	100.00%
Bootstrap support for H9G6C9 as seed ortholog is 100%.
Bootstrap support for O84408 as seed ortholog is 100%.

Group of orthologs #189. Best score 50 bits
Score difference with first non-orthologous sequence - A.carolinensis:7 C.trachomatis:50

G1KMC9              	100.00%		O84459              	100.00%
G1KUJ2              	39.04%		
G1KK15              	38.62%		
Bootstrap support for G1KMC9 as seed ortholog is 62%.
Alternative seed ortholog is G1KMR1 (7 bits away from this cluster)
Bootstrap support for O84459 as seed ortholog is 100%.

Group of orthologs #190. Best score 50 bits
Score difference with first non-orthologous sequence - A.carolinensis:50 C.trachomatis:50

H9GJJ9              	100.00%		O84776              	100.00%
Bootstrap support for H9GJJ9 as seed ortholog is 100%.
Bootstrap support for O84776 as seed ortholog is 100%.

Group of orthologs #191. Best score 49 bits
Score difference with first non-orthologous sequence - A.carolinensis:49 C.trachomatis:49

H9GLK7              	100.00%		O84778              	100.00%
H9GCC5              	69.01%		
Bootstrap support for H9GLK7 as seed ortholog is 100%.
Bootstrap support for O84778 as seed ortholog is 100%.

Group of orthologs #192. Best score 47 bits
Score difference with first non-orthologous sequence - A.carolinensis:47 C.trachomatis:47

G1KK77              	100.00%		O84618              	100.00%
Bootstrap support for G1KK77 as seed ortholog is 100%.
Bootstrap support for O84618 as seed ortholog is 100%.

Group of orthologs #193. Best score 46 bits
Score difference with first non-orthologous sequence - A.carolinensis:46 C.trachomatis:46

G1KKN1              	100.00%		O84808              	100.00%
Bootstrap support for G1KKN1 as seed ortholog is 100%.
Bootstrap support for O84808 as seed ortholog is 100%.

Group of orthologs #194. Best score 44 bits
Score difference with first non-orthologous sequence - A.carolinensis:44 C.trachomatis:44

G1KMX5              	100.00%		O84263              	100.00%
G1KIA5              	33.49%		O84541              	13.89%
Bootstrap support for G1KMX5 as seed ortholog is 100%.
Bootstrap support for O84263 as seed ortholog is 100%.

Group of orthologs #195. Best score 42 bits
Score difference with first non-orthologous sequence - A.carolinensis:42 C.trachomatis:42

H9GE26              	100.00%		O84777              	100.00%
G1K9N5              	70.29%		
Bootstrap support for H9GE26 as seed ortholog is 100%.
Bootstrap support for O84777 as seed ortholog is 100%.

Group of orthologs #196. Best score 40 bits
Score difference with first non-orthologous sequence - A.carolinensis:40 C.trachomatis:40

H9G8M9              	100.00%		O84687              	100.00%
G1KZ25              	64.55%		
Bootstrap support for H9G8M9 as seed ortholog is 100%.
Bootstrap support for O84687 as seed ortholog is 100%.