###################################
268 groups of orthologs
328 in-paralogs from A.capsulata
290 in-paralogs from M.jannaschii
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 642 bits
Score difference with first non-orthologous sequence - A.capsulata:240 M.jannaschii:642

C0NZL8              	100.00%		Q58445              	100.00%
Bootstrap support for C0NZL8 as seed ortholog is 99%.
Bootstrap support for Q58445 as seed ortholog is 100%.

Group of orthologs #2. Best score 577 bits
Score difference with first non-orthologous sequence - A.capsulata:464 M.jannaschii:577

C0NT97              	100.00%		Q57670              	100.00%
Bootstrap support for C0NT97 as seed ortholog is 100%.
Bootstrap support for Q57670 as seed ortholog is 100%.

Group of orthologs #3. Best score 546 bits
Score difference with first non-orthologous sequence - A.capsulata:237 M.jannaschii:546

C0P096              	100.00%		Q58623              	100.00%
Bootstrap support for C0P096 as seed ortholog is 100%.
Bootstrap support for Q58623 as seed ortholog is 100%.

Group of orthologs #4. Best score 517 bits
Score difference with first non-orthologous sequence - A.capsulata:383 M.jannaschii:517

C0NSJ0              	100.00%		Q57669              	100.00%
Bootstrap support for C0NSJ0 as seed ortholog is 100%.
Bootstrap support for Q57669 as seed ortholog is 100%.

Group of orthologs #5. Best score 512 bits
Score difference with first non-orthologous sequence - A.capsulata:69 M.jannaschii:512

C0NF61              	100.00%		Q58556              	100.00%
Bootstrap support for C0NF61 as seed ortholog is 90%.
Bootstrap support for Q58556 as seed ortholog is 100%.

Group of orthologs #6. Best score 497 bits
Score difference with first non-orthologous sequence - A.capsulata:188 M.jannaschii:497

C0NL66              	100.00%		Q58357              	100.00%
Bootstrap support for C0NL66 as seed ortholog is 99%.
Bootstrap support for Q58357 as seed ortholog is 100%.

Group of orthologs #7. Best score 486 bits
Score difference with first non-orthologous sequence - A.capsulata:486 M.jannaschii:486

C0NDY9              	100.00%		Q58574              	100.00%
Bootstrap support for C0NDY9 as seed ortholog is 100%.
Bootstrap support for Q58574 as seed ortholog is 100%.

Group of orthologs #8. Best score 470 bits
Score difference with first non-orthologous sequence - A.capsulata:212 M.jannaschii:353

P40911              	100.00%		Q57770              	100.00%
Bootstrap support for P40911 as seed ortholog is 100%.
Bootstrap support for Q57770 as seed ortholog is 100%.

Group of orthologs #9. Best score 467 bits
Score difference with first non-orthologous sequence - A.capsulata:368 M.jannaschii:467

C0NJB5              	100.00%		Q58129              	100.00%
Bootstrap support for C0NJB5 as seed ortholog is 100%.
Bootstrap support for Q58129 as seed ortholog is 100%.

Group of orthologs #10. Best score 452 bits
Score difference with first non-orthologous sequence - A.capsulata:452 M.jannaschii:452

C0NAB0              	100.00%		Q60173              	100.00%
Bootstrap support for C0NAB0 as seed ortholog is 100%.
Bootstrap support for Q60173 as seed ortholog is 100%.

Group of orthologs #11. Best score 451 bits
Score difference with first non-orthologous sequence - A.capsulata:451 M.jannaschii:451

C0NE28              	100.00%		Q57681              	100.00%
Bootstrap support for C0NE28 as seed ortholog is 100%.
Bootstrap support for Q57681 as seed ortholog is 100%.

Group of orthologs #12. Best score 439 bits
Score difference with first non-orthologous sequence - A.capsulata:439 M.jannaschii:439

C0NQY7              	100.00%		Q58536              	100.00%
Bootstrap support for C0NQY7 as seed ortholog is 100%.
Bootstrap support for Q58536 as seed ortholog is 100%.

Group of orthologs #13. Best score 439 bits
Score difference with first non-orthologous sequence - A.capsulata:247 M.jannaschii:290

C0NU24              	100.00%		Q57725              	100.00%
Bootstrap support for C0NU24 as seed ortholog is 100%.
Bootstrap support for Q57725 as seed ortholog is 100%.

Group of orthologs #14. Best score 413 bits
Score difference with first non-orthologous sequence - A.capsulata:30 M.jannaschii:413

C0NW13              	100.00%		Q58405              	100.00%
Bootstrap support for C0NW13 as seed ortholog is 79%.
Bootstrap support for Q58405 as seed ortholog is 100%.

Group of orthologs #15. Best score 410 bits
Score difference with first non-orthologous sequence - A.capsulata:410 M.jannaschii:410

C0NBL4              	100.00%		Q58672              	100.00%
C0NA31              	26.23%		
Bootstrap support for C0NBL4 as seed ortholog is 100%.
Bootstrap support for Q58672 as seed ortholog is 100%.

Group of orthologs #16. Best score 403 bits
Score difference with first non-orthologous sequence - A.capsulata:403 M.jannaschii:403

C0NSJ2              	100.00%		Q60179              	100.00%
Bootstrap support for C0NSJ2 as seed ortholog is 100%.
Bootstrap support for Q60179 as seed ortholog is 100%.

Group of orthologs #17. Best score 388 bits
Score difference with first non-orthologous sequence - A.capsulata:388 M.jannaschii:388

C0NH95              	100.00%		Q58050              	100.00%
Bootstrap support for C0NH95 as seed ortholog is 100%.
Bootstrap support for Q58050 as seed ortholog is 100%.

Group of orthologs #18. Best score 383 bits
Score difference with first non-orthologous sequence - A.capsulata:256 M.jannaschii:383

C0NAD8              	100.00%		Q58657              	100.00%
Bootstrap support for C0NAD8 as seed ortholog is 100%.
Bootstrap support for Q58657 as seed ortholog is 100%.

Group of orthologs #19. Best score 368 bits
Score difference with first non-orthologous sequence - A.capsulata:368 M.jannaschii:368

C0NSR5              	100.00%		Q57710              	100.00%
Bootstrap support for C0NSR5 as seed ortholog is 100%.
Bootstrap support for Q57710 as seed ortholog is 100%.

Group of orthologs #20. Best score 357 bits
Score difference with first non-orthologous sequence - A.capsulata:13 M.jannaschii:357

C0NDN0              	100.00%		Q58576              	100.00%
Bootstrap support for C0NDN0 as seed ortholog is 75%.
Bootstrap support for Q58576 as seed ortholog is 100%.

Group of orthologs #21. Best score 348 bits
Score difference with first non-orthologous sequence - A.capsulata:124 M.jannaschii:348

C0NT27              	100.00%		Q58374              	100.00%
Bootstrap support for C0NT27 as seed ortholog is 98%.
Bootstrap support for Q58374 as seed ortholog is 100%.

Group of orthologs #22. Best score 346 bits
Score difference with first non-orthologous sequence - A.capsulata:346 M.jannaschii:346

C0NDZ9              	100.00%		Q58090              	100.00%
Bootstrap support for C0NDZ9 as seed ortholog is 100%.
Bootstrap support for Q58090 as seed ortholog is 100%.

Group of orthologs #23. Best score 345 bits
Score difference with first non-orthologous sequence - A.capsulata:118 M.jannaschii:345

C0NSN4              	100.00%		Q58448              	100.00%
C0NNR3              	17.50%		
C0NFC9              	5.61%		
Bootstrap support for C0NSN4 as seed ortholog is 82%.
Bootstrap support for Q58448 as seed ortholog is 100%.

Group of orthologs #24. Best score 343 bits
Score difference with first non-orthologous sequence - A.capsulata:131 M.jannaschii:343

C0NIB7              	100.00%		Q58424              	100.00%
Bootstrap support for C0NIB7 as seed ortholog is 99%.
Bootstrap support for Q58424 as seed ortholog is 100%.

Group of orthologs #25. Best score 331 bits
Score difference with first non-orthologous sequence - A.capsulata:331 M.jannaschii:331

C0NUD8              	100.00%		Q58722              	100.00%
C0NR50              	9.64%		
Bootstrap support for C0NUD8 as seed ortholog is 100%.
Bootstrap support for Q58722 as seed ortholog is 100%.

Group of orthologs #26. Best score 321 bits
Score difference with first non-orthologous sequence - A.capsulata:321 M.jannaschii:321

C0NJC3              	100.00%		Q58783              	100.00%
Bootstrap support for C0NJC3 as seed ortholog is 100%.
Bootstrap support for Q58783 as seed ortholog is 100%.

Group of orthologs #27. Best score 319 bits
Score difference with first non-orthologous sequence - A.capsulata:319 M.jannaschii:174

C0NTR5              	100.00%		Q57565              	100.00%
Bootstrap support for C0NTR5 as seed ortholog is 100%.
Bootstrap support for Q57565 as seed ortholog is 100%.

Group of orthologs #28. Best score 319 bits
Score difference with first non-orthologous sequence - A.capsulata:191 M.jannaschii:319

C0NUQ9              	100.00%		Q60356              	100.00%
Bootstrap support for C0NUQ9 as seed ortholog is 99%.
Bootstrap support for Q60356 as seed ortholog is 100%.

Group of orthologs #29. Best score 317 bits
Score difference with first non-orthologous sequence - A.capsulata:10 M.jannaschii:317

C0NZC9              	100.00%		Q59037              	100.00%
Bootstrap support for C0NZC9 as seed ortholog is 53%.
Alternative seed ortholog is C0ND64 (10 bits away from this cluster)
Bootstrap support for Q59037 as seed ortholog is 100%.

Group of orthologs #30. Best score 316 bits
Score difference with first non-orthologous sequence - A.capsulata:316 M.jannaschii:316

C0P131              	100.00%		Q58815              	100.00%
Bootstrap support for C0P131 as seed ortholog is 100%.
Bootstrap support for Q58815 as seed ortholog is 100%.

Group of orthologs #31. Best score 311 bits
Score difference with first non-orthologous sequence - A.capsulata:311 M.jannaschii:311

C0NAG1              	100.00%		Q58628              	100.00%
Bootstrap support for C0NAG1 as seed ortholog is 100%.
Bootstrap support for Q58628 as seed ortholog is 100%.

Group of orthologs #32. Best score 298 bits
Score difference with first non-orthologous sequence - A.capsulata:298 M.jannaschii:298

C0NBC7              	100.00%		Q59011              	100.00%
Bootstrap support for C0NBC7 as seed ortholog is 100%.
Bootstrap support for Q59011 as seed ortholog is 100%.

Group of orthologs #33. Best score 297 bits
Score difference with first non-orthologous sequence - A.capsulata:297 M.jannaschii:297

C0NGC3              	100.00%		Q58575              	100.00%
Bootstrap support for C0NGC3 as seed ortholog is 100%.
Bootstrap support for Q58575 as seed ortholog is 100%.

Group of orthologs #34. Best score 295 bits
Score difference with first non-orthologous sequence - A.capsulata:295 M.jannaschii:295

C0P0P7              	100.00%		Q58659              	100.00%
C0NQQ8              	47.02%		
Bootstrap support for C0P0P7 as seed ortholog is 100%.
Bootstrap support for Q58659 as seed ortholog is 100%.

Group of orthologs #35. Best score 295 bits
Score difference with first non-orthologous sequence - A.capsulata:224 M.jannaschii:295

C0NZW4              	100.00%		Q58530              	100.00%
Bootstrap support for C0NZW4 as seed ortholog is 100%.
Bootstrap support for Q58530 as seed ortholog is 100%.

Group of orthologs #36. Best score 289 bits
Score difference with first non-orthologous sequence - A.capsulata:94 M.jannaschii:289

C0NG27              	100.00%		Q58413              	100.00%
Bootstrap support for C0NG27 as seed ortholog is 92%.
Bootstrap support for Q58413 as seed ortholog is 100%.

Group of orthologs #37. Best score 279 bits
Score difference with first non-orthologous sequence - A.capsulata:279 M.jannaschii:279

C0NE67              	100.00%		Q57612              	100.00%
Bootstrap support for C0NE67 as seed ortholog is 100%.
Bootstrap support for Q57612 as seed ortholog is 100%.

Group of orthologs #38. Best score 278 bits
Score difference with first non-orthologous sequence - A.capsulata:278 M.jannaschii:278

C0NXL8              	100.00%		Q58201              	100.00%
Bootstrap support for C0NXL8 as seed ortholog is 100%.
Bootstrap support for Q58201 as seed ortholog is 100%.

Group of orthologs #39. Best score 277 bits
Score difference with first non-orthologous sequence - A.capsulata:277 M.jannaschii:277

C0NRL6              	100.00%		Q58224              	100.00%
C0NX33              	48.27%		
Bootstrap support for C0NRL6 as seed ortholog is 100%.
Bootstrap support for Q58224 as seed ortholog is 100%.

Group of orthologs #40. Best score 277 bits
Score difference with first non-orthologous sequence - A.capsulata:277 M.jannaschii:277

C0NQY8              	100.00%		Q58643              	100.00%
Bootstrap support for C0NQY8 as seed ortholog is 100%.
Bootstrap support for Q58643 as seed ortholog is 100%.

Group of orthologs #41. Best score 272 bits
Score difference with first non-orthologous sequence - A.capsulata:272 M.jannaschii:272

C0NEA4              	100.00%		Q57658              	100.00%
Bootstrap support for C0NEA4 as seed ortholog is 100%.
Bootstrap support for Q57658 as seed ortholog is 100%.

Group of orthologs #42. Best score 270 bits
Score difference with first non-orthologous sequence - A.capsulata:270 M.jannaschii:270

C0NHA0              	100.00%		Q58475              	100.00%
Bootstrap support for C0NHA0 as seed ortholog is 100%.
Bootstrap support for Q58475 as seed ortholog is 100%.

Group of orthologs #43. Best score 270 bits
Score difference with first non-orthologous sequence - A.capsulata:270 M.jannaschii:270

C0NQW8              	100.00%		Q58425              	100.00%
Bootstrap support for C0NQW8 as seed ortholog is 100%.
Bootstrap support for Q58425 as seed ortholog is 100%.

Group of orthologs #44. Best score 269 bits
Score difference with first non-orthologous sequence - A.capsulata:269 M.jannaschii:269

C0NHN7              	100.00%		Q57657              	100.00%
Bootstrap support for C0NHN7 as seed ortholog is 100%.
Bootstrap support for Q57657 as seed ortholog is 100%.

Group of orthologs #45. Best score 263 bits
Score difference with first non-orthologous sequence - A.capsulata:263 M.jannaschii:263

C0NE03              	100.00%		Q60175              	100.00%
Bootstrap support for C0NE03 as seed ortholog is 100%.
Bootstrap support for Q60175 as seed ortholog is 100%.

Group of orthologs #46. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:260 M.jannaschii:260

C0NUD1              	100.00%		Q58508              	100.00%
Bootstrap support for C0NUD1 as seed ortholog is 100%.
Bootstrap support for Q58508 as seed ortholog is 100%.

Group of orthologs #47. Best score 257 bits
Score difference with first non-orthologous sequence - A.capsulata:166 M.jannaschii:257

C0NLW7              	100.00%		Q58635              	100.00%
Bootstrap support for C0NLW7 as seed ortholog is 99%.
Bootstrap support for Q58635 as seed ortholog is 100%.

Group of orthologs #48. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:253 M.jannaschii:253

C0NL77              	100.00%		Q60174              	100.00%
Bootstrap support for C0NL77 as seed ortholog is 100%.
Bootstrap support for Q60174 as seed ortholog is 100%.

Group of orthologs #49. Best score 252 bits
Score difference with first non-orthologous sequence - A.capsulata:74 M.jannaschii:252

C0NSW3              	100.00%		Q58806              	100.00%
C0NMH9              	37.25%		
C0P037              	8.95%		
C0NUM3              	5.61%		
Bootstrap support for C0NSW3 as seed ortholog is 94%.
Bootstrap support for Q58806 as seed ortholog is 100%.

Group of orthologs #50. Best score 250 bits
Score difference with first non-orthologous sequence - A.capsulata:250 M.jannaschii:250

C0NQL9              	100.00%		Q60178              	100.00%
Bootstrap support for C0NQL9 as seed ortholog is 100%.
Bootstrap support for Q60178 as seed ortholog is 100%.

Group of orthologs #51. Best score 250 bits
Score difference with first non-orthologous sequence - A.capsulata:137 M.jannaschii:130

C0NXH6              	100.00%		Q58131              	100.00%
Bootstrap support for C0NXH6 as seed ortholog is 99%.
Bootstrap support for Q58131 as seed ortholog is 99%.

Group of orthologs #52. Best score 243 bits
Score difference with first non-orthologous sequence - A.capsulata:19 M.jannaschii:243

C0NXP5              	100.00%		Q58130              	100.00%
                    	       		Q58991              	14.46%
Bootstrap support for C0NXP5 as seed ortholog is 68%.
Alternative seed ortholog is C0NNK4 (19 bits away from this cluster)
Bootstrap support for Q58130 as seed ortholog is 100%.

Group of orthologs #53. Best score 243 bits
Score difference with first non-orthologous sequence - A.capsulata:177 M.jannaschii:243

C0NHZ5              	100.00%		Q58728              	100.00%
Bootstrap support for C0NHZ5 as seed ortholog is 100%.
Bootstrap support for Q58728 as seed ortholog is 100%.

Group of orthologs #54. Best score 242 bits
Score difference with first non-orthologous sequence - A.capsulata:242 M.jannaschii:242

C0NCM7              	100.00%		Q58884              	100.00%
C0NP36              	6.25%		Q58371              	22.32%
C0NWU5              	6.07%		Q57809              	17.33%
C0NTA9              	5.90%		Q60275              	5.99%
Bootstrap support for C0NCM7 as seed ortholog is 100%.
Bootstrap support for Q58884 as seed ortholog is 100%.

Group of orthologs #55. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:122 M.jannaschii:238

C0NBD1              	100.00%		Q57911              	100.00%
Bootstrap support for C0NBD1 as seed ortholog is 99%.
Bootstrap support for Q57911 as seed ortholog is 100%.

Group of orthologs #56. Best score 237 bits
Score difference with first non-orthologous sequence - A.capsulata:237 M.jannaschii:168

C0NJA3              	100.00%		Q49593              	100.00%
C0NB28              	8.06%		
Bootstrap support for C0NJA3 as seed ortholog is 100%.
Bootstrap support for Q49593 as seed ortholog is 100%.

Group of orthologs #57. Best score 237 bits
Score difference with first non-orthologous sequence - A.capsulata:134 M.jannaschii:237

C0NLI8              	100.00%		Q57568              	100.00%
Bootstrap support for C0NLI8 as seed ortholog is 99%.
Bootstrap support for Q57568 as seed ortholog is 100%.

Group of orthologs #58. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:44 M.jannaschii:150

C0NPB1              	100.00%		Q57731              	100.00%
Bootstrap support for C0NPB1 as seed ortholog is 89%.
Bootstrap support for Q57731 as seed ortholog is 99%.

Group of orthologs #59. Best score 233 bits
Score difference with first non-orthologous sequence - A.capsulata:3 M.jannaschii:149

C0NXA8              	100.00%		Q58083              	100.00%
C0NAF4              	11.43%		
C0NQL1              	6.22%		
Bootstrap support for C0NXA8 as seed ortholog is 52%.
Alternative seed ortholog is C0NV39 (3 bits away from this cluster)
Bootstrap support for Q58083 as seed ortholog is 100%.

Group of orthologs #60. Best score 232 bits
Score difference with first non-orthologous sequence - A.capsulata:29 M.jannaschii:232

C0NNE2              	100.00%		P81291              	100.00%
                    	       		Q58409              	26.73%
Bootstrap support for C0NNE2 as seed ortholog is 72%.
Alternative seed ortholog is C0NZQ0 (29 bits away from this cluster)
Bootstrap support for P81291 as seed ortholog is 100%.

Group of orthologs #61. Best score 232 bits
Score difference with first non-orthologous sequence - A.capsulata:232 M.jannaschii:232

C0NUV0              	100.00%		Q57772              	100.00%
Bootstrap support for C0NUV0 as seed ortholog is 100%.
Bootstrap support for Q57772 as seed ortholog is 100%.

Group of orthologs #62. Best score 228 bits
Score difference with first non-orthologous sequence - A.capsulata:53 M.jannaschii:228

C0NKS5              	100.00%		Q58772              	100.00%
Bootstrap support for C0NKS5 as seed ortholog is 88%.
Bootstrap support for Q58772 as seed ortholog is 100%.

Group of orthologs #63. Best score 226 bits
Score difference with first non-orthologous sequence - A.capsulata:226 M.jannaschii:226

C0NHK3              	100.00%		Q58820              	100.00%
Bootstrap support for C0NHK3 as seed ortholog is 100%.
Bootstrap support for Q58820 as seed ortholog is 100%.

Group of orthologs #64. Best score 224 bits
Score difference with first non-orthologous sequence - A.capsulata:224 M.jannaschii:224

C0NE02              	100.00%		Q57645              	100.00%
Bootstrap support for C0NE02 as seed ortholog is 100%.
Bootstrap support for Q57645 as seed ortholog is 100%.

Group of orthologs #65. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:223 M.jannaschii:223

C0NE71              	100.00%		Q58239              	100.00%
Bootstrap support for C0NE71 as seed ortholog is 100%.
Bootstrap support for Q58239 as seed ortholog is 100%.

Group of orthologs #66. Best score 217 bits
Score difference with first non-orthologous sequence - A.capsulata:217 M.jannaschii:217

C0NYR4              	100.00%		Q57663              	100.00%
Bootstrap support for C0NYR4 as seed ortholog is 100%.
Bootstrap support for Q57663 as seed ortholog is 100%.

Group of orthologs #67. Best score 215 bits
Score difference with first non-orthologous sequence - A.capsulata:215 M.jannaschii:215

C0NDC6              	100.00%		P54014              	100.00%
Bootstrap support for C0NDC6 as seed ortholog is 100%.
Bootstrap support for P54014 as seed ortholog is 100%.

Group of orthologs #68. Best score 213 bits
Score difference with first non-orthologous sequence - A.capsulata:213 M.jannaschii:213

C0NIE7              	100.00%		Q58373              	100.00%
Bootstrap support for C0NIE7 as seed ortholog is 100%.
Bootstrap support for Q58373 as seed ortholog is 100%.

Group of orthologs #69. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:121 M.jannaschii:211

C0NMX2              	100.00%		Q58595              	100.00%
                    	       		Q58787              	37.10%
                    	       		Q57926              	21.09%
Bootstrap support for C0NMX2 as seed ortholog is 99%.
Bootstrap support for Q58595 as seed ortholog is 100%.

Group of orthologs #70. Best score 207 bits
Score difference with first non-orthologous sequence - A.capsulata:207 M.jannaschii:207

C0NI03              	100.00%		Q57761              	100.00%
Bootstrap support for C0NI03 as seed ortholog is 100%.
Bootstrap support for Q57761 as seed ortholog is 100%.

Group of orthologs #71. Best score 202 bits
Score difference with first non-orthologous sequence - A.capsulata:127 M.jannaschii:79

C0P108              	100.00%		Q57896              	100.00%
Bootstrap support for C0P108 as seed ortholog is 99%.
Bootstrap support for Q57896 as seed ortholog is 96%.

Group of orthologs #72. Best score 201 bits
Score difference with first non-orthologous sequence - A.capsulata:69 M.jannaschii:201

C0NP94              	100.00%		Q58950              	100.00%
Bootstrap support for C0NP94 as seed ortholog is 96%.
Bootstrap support for Q58950 as seed ortholog is 100%.

Group of orthologs #73. Best score 200 bits
Score difference with first non-orthologous sequence - A.capsulata:102 M.jannaschii:200

C0NR03              	100.00%		P54017              	100.00%
Bootstrap support for C0NR03 as seed ortholog is 99%.
Bootstrap support for P54017 as seed ortholog is 100%.

Group of orthologs #74. Best score 200 bits
Score difference with first non-orthologous sequence - A.capsulata:200 M.jannaschii:200

C0NV23              	100.00%		Q58542              	100.00%
Bootstrap support for C0NV23 as seed ortholog is 100%.
Bootstrap support for Q58542 as seed ortholog is 100%.

Group of orthologs #75. Best score 197 bits
Score difference with first non-orthologous sequence - A.capsulata:197 M.jannaschii:197

C0NX78              	100.00%		Q58347              	100.00%
Bootstrap support for C0NX78 as seed ortholog is 100%.
Bootstrap support for Q58347 as seed ortholog is 100%.

Group of orthologs #76. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:196 M.jannaschii:196

C0NYL1              	100.00%		Q57572              	100.00%
Bootstrap support for C0NYL1 as seed ortholog is 100%.
Bootstrap support for Q57572 as seed ortholog is 100%.

Group of orthologs #77. Best score 194 bits
Score difference with first non-orthologous sequence - A.capsulata:194 M.jannaschii:129

C0NIU2              	100.00%		Q58291              	100.00%
Bootstrap support for C0NIU2 as seed ortholog is 100%.
Bootstrap support for Q58291 as seed ortholog is 99%.

Group of orthologs #78. Best score 193 bits
Score difference with first non-orthologous sequence - A.capsulata:193 M.jannaschii:193

C0NC71              	100.00%		Q58524              	100.00%
Bootstrap support for C0NC71 as seed ortholog is 100%.
Bootstrap support for Q58524 as seed ortholog is 100%.

Group of orthologs #79. Best score 193 bits
Score difference with first non-orthologous sequence - A.capsulata:86 M.jannaschii:193

C0NYZ7              	100.00%		Q58560              	100.00%
Bootstrap support for C0NYZ7 as seed ortholog is 98%.
Bootstrap support for Q58560 as seed ortholog is 100%.

Group of orthologs #80. Best score 192 bits
Score difference with first non-orthologous sequence - A.capsulata:192 M.jannaschii:192

C0NQK4              	100.00%		Q57854              	100.00%
Bootstrap support for C0NQK4 as seed ortholog is 100%.
Bootstrap support for Q57854 as seed ortholog is 100%.

Group of orthologs #81. Best score 190 bits
Score difference with first non-orthologous sequence - A.capsulata:190 M.jannaschii:190

C0NJB1              	100.00%		Q58058              	100.00%
Bootstrap support for C0NJB1 as seed ortholog is 100%.
Bootstrap support for Q58058 as seed ortholog is 100%.

Group of orthologs #82. Best score 190 bits
Score difference with first non-orthologous sequence - A.capsulata:190 M.jannaschii:190

C0NWD8              	100.00%		Q58295              	100.00%
Bootstrap support for C0NWD8 as seed ortholog is 100%.
Bootstrap support for Q58295 as seed ortholog is 100%.

Group of orthologs #83. Best score 188 bits
Score difference with first non-orthologous sequence - A.capsulata:188 M.jannaschii:188

C0NKL8              	100.00%		Q57984              	100.00%
Bootstrap support for C0NKL8 as seed ortholog is 100%.
Bootstrap support for Q57984 as seed ortholog is 100%.

Group of orthologs #84. Best score 188 bits
Score difference with first non-orthologous sequence - A.capsulata:188 M.jannaschii:188

C0NL37              	100.00%		Q58670              	100.00%
Bootstrap support for C0NL37 as seed ortholog is 100%.
Bootstrap support for Q58670 as seed ortholog is 100%.

Group of orthologs #85. Best score 188 bits
Score difference with first non-orthologous sequence - A.capsulata:188 M.jannaschii:188

C0NYV9              	100.00%		Q58715              	100.00%
Bootstrap support for C0NYV9 as seed ortholog is 100%.
Bootstrap support for Q58715 as seed ortholog is 100%.

Group of orthologs #86. Best score 186 bits
Score difference with first non-orthologous sequence - A.capsulata:186 M.jannaschii:186

C0NE81              	100.00%		Q57991              	100.00%
Bootstrap support for C0NE81 as seed ortholog is 100%.
Bootstrap support for Q57991 as seed ortholog is 100%.

Group of orthologs #87. Best score 186 bits
Score difference with first non-orthologous sequence - A.capsulata:6 M.jannaschii:186

C0NRU2              	100.00%		Q60177              	100.00%
Bootstrap support for C0NRU2 as seed ortholog is 59%.
Alternative seed ortholog is C0NLB3 (6 bits away from this cluster)
Bootstrap support for Q60177 as seed ortholog is 100%.

Group of orthologs #88. Best score 184 bits
Score difference with first non-orthologous sequence - A.capsulata:184 M.jannaschii:184

C0NED0              	100.00%		Q58633              	100.00%
                    	       		Q57626              	10.51%
Bootstrap support for C0NED0 as seed ortholog is 100%.
Bootstrap support for Q58633 as seed ortholog is 100%.

Group of orthologs #89. Best score 184 bits
Score difference with first non-orthologous sequence - A.capsulata:184 M.jannaschii:184

C0NF40              	100.00%		P54063              	100.00%
Bootstrap support for C0NF40 as seed ortholog is 100%.
Bootstrap support for P54063 as seed ortholog is 100%.

Group of orthologs #90. Best score 183 bits
Score difference with first non-orthologous sequence - A.capsulata:89 M.jannaschii:183

C0NF46              	100.00%		Q58105              	100.00%
C0NGR0              	14.01%		
Bootstrap support for C0NF46 as seed ortholog is 99%.
Bootstrap support for Q58105 as seed ortholog is 100%.

Group of orthologs #91. Best score 183 bits
Score difference with first non-orthologous sequence - A.capsulata:183 M.jannaschii:183

C0NV09              	100.00%		Q57624              	100.00%
Bootstrap support for C0NV09 as seed ortholog is 100%.
Bootstrap support for Q57624 as seed ortholog is 100%.

Group of orthologs #92. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 M.jannaschii:181

C0NGS5              	100.00%		Q58992              	100.00%
C0NMB4              	53.54%		
Bootstrap support for C0NGS5 as seed ortholog is 100%.
Bootstrap support for Q58992 as seed ortholog is 100%.

Group of orthologs #93. Best score 174 bits
Score difference with first non-orthologous sequence - A.capsulata:174 M.jannaschii:174

C0NZL2              	100.00%		Q58938              	100.00%
Bootstrap support for C0NZL2 as seed ortholog is 100%.
Bootstrap support for Q58938 as seed ortholog is 100%.

Group of orthologs #94. Best score 173 bits
Score difference with first non-orthologous sequence - A.capsulata:173 M.jannaschii:173

C0NXU1              	100.00%		Q58839              	100.00%
Bootstrap support for C0NXU1 as seed ortholog is 100%.
Bootstrap support for Q58839 as seed ortholog is 100%.

Group of orthologs #95. Best score 172 bits
Score difference with first non-orthologous sequence - A.capsulata:172 M.jannaschii:172

C0NGZ5              	100.00%		Q59046              	100.00%
Bootstrap support for C0NGZ5 as seed ortholog is 100%.
Bootstrap support for Q59046 as seed ortholog is 100%.

Group of orthologs #96. Best score 172 bits
Score difference with first non-orthologous sequence - A.capsulata:172 M.jannaschii:172

C0NVX9              	100.00%		P54045              	100.00%
Bootstrap support for C0NVX9 as seed ortholog is 100%.
Bootstrap support for P54045 as seed ortholog is 100%.

Group of orthologs #97. Best score 169 bits
Score difference with first non-orthologous sequence - A.capsulata:33 M.jannaschii:169

C0P151              	100.00%		Q59050              	100.00%
Bootstrap support for C0P151 as seed ortholog is 84%.
Bootstrap support for Q59050 as seed ortholog is 100%.

Group of orthologs #98. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:168 M.jannaschii:168

C0NCG1              	100.00%		P54060              	100.00%
Bootstrap support for C0NCG1 as seed ortholog is 100%.
Bootstrap support for P54060 as seed ortholog is 100%.

Group of orthologs #99. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:109 M.jannaschii:168

C0NSB0              	100.00%		Q58810              	100.00%
Bootstrap support for C0NSB0 as seed ortholog is 99%.
Bootstrap support for Q58810 as seed ortholog is 100%.

Group of orthologs #100. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:85 M.jannaschii:166

C0NIQ4              	100.00%		Q58725              	100.00%
C0NX86              	38.69%		
Bootstrap support for C0NIQ4 as seed ortholog is 99%.
Bootstrap support for Q58725 as seed ortholog is 100%.

Group of orthologs #101. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:66 M.jannaschii:166

C0NLY7              	100.00%		Q57635              	100.00%
C0NW53              	13.36%		
Bootstrap support for C0NLY7 as seed ortholog is 86%.
Bootstrap support for Q57635 as seed ortholog is 100%.

Group of orthologs #102. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 M.jannaschii:166

C0NEV9              	100.00%		Q58108              	100.00%
Bootstrap support for C0NEV9 as seed ortholog is 100%.
Bootstrap support for Q58108 as seed ortholog is 100%.

Group of orthologs #103. Best score 164 bits
Score difference with first non-orthologous sequence - A.capsulata:99 M.jannaschii:164

C0NIK7              	100.00%		Q58944              	100.00%
Bootstrap support for C0NIK7 as seed ortholog is 98%.
Bootstrap support for Q58944 as seed ortholog is 100%.

Group of orthologs #104. Best score 159 bits
Score difference with first non-orthologous sequence - A.capsulata:159 M.jannaschii:159

C0NJM9              	100.00%		Q57686              	100.00%
Bootstrap support for C0NJM9 as seed ortholog is 100%.
Bootstrap support for Q57686 as seed ortholog is 100%.

Group of orthologs #105. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:118 M.jannaschii:158

C0NJU4              	100.00%		Q58767              	100.00%
Bootstrap support for C0NJU4 as seed ortholog is 99%.
Bootstrap support for Q58767 as seed ortholog is 100%.

Group of orthologs #106. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:158 M.jannaschii:158

C0NMP7              	100.00%		Q58369              	100.00%
Bootstrap support for C0NMP7 as seed ortholog is 100%.
Bootstrap support for Q58369 as seed ortholog is 100%.

Group of orthologs #107. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:158 M.jannaschii:158

C0NSM2              	100.00%		Q58626              	100.00%
Bootstrap support for C0NSM2 as seed ortholog is 100%.
Bootstrap support for Q58626 as seed ortholog is 100%.

Group of orthologs #108. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 M.jannaschii:155

C0ND66              	100.00%		Q57689              	100.00%
C0ND88              	25.14%		
Bootstrap support for C0ND66 as seed ortholog is 100%.
Bootstrap support for Q57689 as seed ortholog is 100%.

Group of orthologs #109. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 M.jannaschii:155

C0NAG5              	100.00%		P54040              	100.00%
Bootstrap support for C0NAG5 as seed ortholog is 100%.
Bootstrap support for P54040 as seed ortholog is 100%.

Group of orthologs #110. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 M.jannaschii:155

C0NL18              	100.00%		Q57981              	100.00%
Bootstrap support for C0NL18 as seed ortholog is 100%.
Bootstrap support for Q57981 as seed ortholog is 100%.

Group of orthologs #111. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:9 M.jannaschii:155

C0NQX0              	100.00%		Q58694              	100.00%
Bootstrap support for C0NQX0 as seed ortholog is 56%.
Alternative seed ortholog is C0NXY6 (9 bits away from this cluster)
Bootstrap support for Q58694 as seed ortholog is 100%.

Group of orthologs #112. Best score 154 bits
Score difference with first non-orthologous sequence - A.capsulata:154 M.jannaschii:154

C0NKW7              	100.00%		P54109              	100.00%
Bootstrap support for C0NKW7 as seed ortholog is 100%.
Bootstrap support for P54109 as seed ortholog is 100%.

Group of orthologs #113. Best score 153 bits
Score difference with first non-orthologous sequence - A.capsulata:153 M.jannaschii:153

C0NFU1              	100.00%		Q58473              	100.00%
Bootstrap support for C0NFU1 as seed ortholog is 100%.
Bootstrap support for Q58473 as seed ortholog is 100%.

Group of orthologs #114. Best score 152 bits
Score difference with first non-orthologous sequence - A.capsulata:152 M.jannaschii:152

C0NBT1              	100.00%		P54012              	100.00%
Bootstrap support for C0NBT1 as seed ortholog is 100%.
Bootstrap support for P54012 as seed ortholog is 100%.

Group of orthologs #115. Best score 152 bits
Score difference with first non-orthologous sequence - A.capsulata:152 M.jannaschii:152

C0NSV1              	100.00%		Q58558              	100.00%
Bootstrap support for C0NSV1 as seed ortholog is 100%.
Bootstrap support for Q58558 as seed ortholog is 100%.

Group of orthologs #116. Best score 151 bits
Score difference with first non-orthologous sequence - A.capsulata:151 M.jannaschii:151

C0NLP3              	100.00%		P54039              	100.00%
Bootstrap support for C0NLP3 as seed ortholog is 100%.
Bootstrap support for P54039 as seed ortholog is 100%.

Group of orthologs #117. Best score 149 bits
Score difference with first non-orthologous sequence - A.capsulata:95 M.jannaschii:149

C0NHS0              	100.00%		Q60182              	100.00%
Bootstrap support for C0NHS0 as seed ortholog is 99%.
Bootstrap support for Q60182 as seed ortholog is 100%.

Group of orthologs #118. Best score 149 bits
Score difference with first non-orthologous sequence - A.capsulata:149 M.jannaschii:149

C0NSG9              	100.00%		Q57834              	100.00%
Bootstrap support for C0NSG9 as seed ortholog is 100%.
Bootstrap support for Q57834 as seed ortholog is 100%.

Group of orthologs #119. Best score 147 bits
Score difference with first non-orthologous sequence - A.capsulata:147 M.jannaschii:18

C0NJ51              	100.00%		Q58516              	100.00%
Bootstrap support for C0NJ51 as seed ortholog is 100%.
Bootstrap support for Q58516 as seed ortholog is 56%.
Alternative seed ortholog is Q58456 (18 bits away from this cluster)

Group of orthologs #120. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 M.jannaschii:144

C0NQV8              	100.00%		P54062              	100.00%
Bootstrap support for C0NQV8 as seed ortholog is 100%.
Bootstrap support for P54062 as seed ortholog is 100%.

Group of orthologs #121. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 M.jannaschii:144

C0NVE4              	100.00%		P54021              	100.00%
Bootstrap support for C0NVE4 as seed ortholog is 100%.
Bootstrap support for P54021 as seed ortholog is 100%.

Group of orthologs #122. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 M.jannaschii:144

C0NUV9              	100.00%		Q58192              	100.00%
Bootstrap support for C0NUV9 as seed ortholog is 100%.
Bootstrap support for Q58192 as seed ortholog is 100%.

Group of orthologs #123. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 M.jannaschii:143

C0NWV6              	100.00%		Q58601              	100.00%
Bootstrap support for C0NWV6 as seed ortholog is 100%.
Bootstrap support for Q58601 as seed ortholog is 100%.

Group of orthologs #124. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:141 M.jannaschii:141

C0NPH6              	100.00%		Q58296              	100.00%
                    	       		Q58080              	10.38%
Bootstrap support for C0NPH6 as seed ortholog is 100%.
Bootstrap support for Q58296 as seed ortholog is 100%.

Group of orthologs #125. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:141 M.jannaschii:141

C0NTG5              	100.00%		P54015              	100.00%
Bootstrap support for C0NTG5 as seed ortholog is 100%.
Bootstrap support for P54015 as seed ortholog is 100%.

Group of orthologs #126. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 M.jannaschii:138

C0NFT8              	100.00%		Q57989              	100.00%
Bootstrap support for C0NFT8 as seed ortholog is 100%.
Bootstrap support for Q57989 as seed ortholog is 100%.

Group of orthologs #127. Best score 137 bits
Score difference with first non-orthologous sequence - A.capsulata:137 M.jannaschii:137

C0NTN5              	100.00%		Q58661              	100.00%
Bootstrap support for C0NTN5 as seed ortholog is 100%.
Bootstrap support for Q58661 as seed ortholog is 100%.

Group of orthologs #128. Best score 136 bits
Score difference with first non-orthologous sequence - A.capsulata:136 M.jannaschii:136

C0NBP9              	100.00%		Q57935              	100.00%
                    	       		Q58433              	12.72%
Bootstrap support for C0NBP9 as seed ortholog is 100%.
Bootstrap support for Q57935 as seed ortholog is 100%.

Group of orthologs #129. Best score 136 bits
Score difference with first non-orthologous sequence - A.capsulata:70 M.jannaschii:136

C0NQK3              	100.00%		Q58339              	100.00%
Bootstrap support for C0NQK3 as seed ortholog is 97%.
Bootstrap support for Q58339 as seed ortholog is 100%.

Group of orthologs #130. Best score 135 bits
Score difference with first non-orthologous sequence - A.capsulata:135 M.jannaschii:135

C0NCP4              	100.00%		Q57963              	100.00%
Bootstrap support for C0NCP4 as seed ortholog is 100%.
Bootstrap support for Q57963 as seed ortholog is 100%.

Group of orthologs #131. Best score 135 bits
Score difference with first non-orthologous sequence - A.capsulata:135 M.jannaschii:135

C0NFV8              	100.00%		P54018              	100.00%
Bootstrap support for C0NFV8 as seed ortholog is 100%.
Bootstrap support for P54018 as seed ortholog is 100%.

Group of orthologs #132. Best score 135 bits
Score difference with first non-orthologous sequence - A.capsulata:135 M.jannaschii:91

C0NL35              	100.00%		Q58365              	100.00%
Bootstrap support for C0NL35 as seed ortholog is 100%.
Bootstrap support for Q58365 as seed ortholog is 99%.

Group of orthologs #133. Best score 135 bits
Score difference with first non-orthologous sequence - A.capsulata:135 M.jannaschii:135

C0NN35              	100.00%		Q58406              	100.00%
Bootstrap support for C0NN35 as seed ortholog is 100%.
Bootstrap support for Q58406 as seed ortholog is 100%.

Group of orthologs #134. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 M.jannaschii:134

C0NCP0              	100.00%		Q59020              	100.00%
Bootstrap support for C0NCP0 as seed ortholog is 100%.
Bootstrap support for Q59020 as seed ortholog is 100%.

Group of orthologs #135. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:132 M.jannaschii:132

C0NIZ7              	100.00%		Q57916              	100.00%
Bootstrap support for C0NIZ7 as seed ortholog is 100%.
Bootstrap support for Q57916 as seed ortholog is 100%.

Group of orthologs #136. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:79 M.jannaschii:132

C0NJ86              	100.00%		Q58859              	100.00%
Bootstrap support for C0NJ86 as seed ortholog is 98%.
Bootstrap support for Q58859 as seed ortholog is 100%.

Group of orthologs #137. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:132 M.jannaschii:132

C0NX47              	100.00%		P54019              	100.00%
Bootstrap support for C0NX47 as seed ortholog is 100%.
Bootstrap support for P54019 as seed ortholog is 100%.

Group of orthologs #138. Best score 131 bits
Score difference with first non-orthologous sequence - A.capsulata:131 M.jannaschii:131

C0NCI7              	100.00%		Q58435              	100.00%
Bootstrap support for C0NCI7 as seed ortholog is 100%.
Bootstrap support for Q58435 as seed ortholog is 100%.

Group of orthologs #139. Best score 131 bits
Score difference with first non-orthologous sequence - A.capsulata:131 M.jannaschii:131

C0ND01              	100.00%		Q58881              	100.00%
Bootstrap support for C0ND01 as seed ortholog is 100%.
Bootstrap support for Q58881 as seed ortholog is 100%.

Group of orthologs #140. Best score 130 bits
Score difference with first non-orthologous sequence - A.capsulata:24 M.jannaschii:130

C0NI39              	100.00%		Q58771              	100.00%
Bootstrap support for C0NI39 as seed ortholog is 69%.
Alternative seed ortholog is C0NQK7 (24 bits away from this cluster)
Bootstrap support for Q58771 as seed ortholog is 100%.

Group of orthologs #141. Best score 130 bits
Score difference with first non-orthologous sequence - A.capsulata:130 M.jannaschii:130

C0NUH8              	100.00%		Q58020              	100.00%
Bootstrap support for C0NUH8 as seed ortholog is 100%.
Bootstrap support for Q58020 as seed ortholog is 100%.

Group of orthologs #142. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:48 M.jannaschii:43

C0NJX8              	100.00%		Q60317              	100.00%
                    	       		Q58097              	24.20%
Bootstrap support for C0NJX8 as seed ortholog is 89%.
Bootstrap support for Q60317 as seed ortholog is 85%.

Group of orthologs #143. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 M.jannaschii:128

C0NDY5              	100.00%		Q59056              	100.00%
C0NU04              	18.52%		
C0NXH3              	16.59%		
C0NUN2              	14.79%		
Bootstrap support for C0NDY5 as seed ortholog is 100%.
Bootstrap support for Q59056 as seed ortholog is 100%.

Group of orthologs #144. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 M.jannaschii:128

C0NMI3              	100.00%		Q58146              	100.00%
Bootstrap support for C0NMI3 as seed ortholog is 100%.
Bootstrap support for Q58146 as seed ortholog is 100%.

Group of orthologs #145. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 M.jannaschii:128

C0NUD0              	100.00%		P54034              	100.00%
Bootstrap support for C0NUD0 as seed ortholog is 100%.
Bootstrap support for P54034 as seed ortholog is 100%.

Group of orthologs #146. Best score 127 bits
Score difference with first non-orthologous sequence - A.capsulata:64 M.jannaschii:127

C0NP68              	100.00%		Q57664              	100.00%
                    	       		Q58455              	7.94%
Bootstrap support for C0NP68 as seed ortholog is 95%.
Bootstrap support for Q57664 as seed ortholog is 100%.

Group of orthologs #147. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:62 M.jannaschii:126

C0NBF4              	100.00%		P54037              	100.00%
Bootstrap support for C0NBF4 as seed ortholog is 99%.
Bootstrap support for P54037 as seed ortholog is 100%.

Group of orthologs #148. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:124 M.jannaschii:52

C0NJR8              	100.00%		Q58501              	100.00%
C0NI64              	9.70%		
Bootstrap support for C0NJR8 as seed ortholog is 100%.
Bootstrap support for Q58501 as seed ortholog is 89%.

Group of orthologs #149. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:79 M.jannaschii:124

C0NLR5              	100.00%		P54020              	100.00%
Bootstrap support for C0NLR5 as seed ortholog is 99%.
Bootstrap support for P54020 as seed ortholog is 100%.

Group of orthologs #150. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:41 M.jannaschii:123

C0P0V2              	100.00%		Q58639              	100.00%
C0NE10              	26.99%		
C0NII4              	23.83%		
C0NLI2              	21.21%		
C0NNA5              	12.85%		
Bootstrap support for C0P0V2 as seed ortholog is 74%.
Alternative seed ortholog is C0NIG0 (41 bits away from this cluster)
Bootstrap support for Q58639 as seed ortholog is 100%.

Group of orthologs #151. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:123 M.jannaschii:123

C0NBK9              	100.00%		Q57638              	100.00%
Bootstrap support for C0NBK9 as seed ortholog is 100%.
Bootstrap support for Q57638 as seed ortholog is 100%.

Group of orthologs #152. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:123 M.jannaschii:123

C0NV64              	100.00%		Q57930              	100.00%
Bootstrap support for C0NV64 as seed ortholog is 100%.
Bootstrap support for Q57930 as seed ortholog is 100%.

Group of orthologs #153. Best score 120 bits
Score difference with first non-orthologous sequence - A.capsulata:120 M.jannaschii:120

C0NEP3              	100.00%		P54041              	100.00%
Bootstrap support for C0NEP3 as seed ortholog is 100%.
Bootstrap support for P54041 as seed ortholog is 100%.

Group of orthologs #154. Best score 120 bits
Score difference with first non-orthologous sequence - A.capsulata:120 M.jannaschii:70

C0NI47              	100.00%		Q58692              	100.00%
Bootstrap support for C0NI47 as seed ortholog is 100%.
Bootstrap support for Q58692 as seed ortholog is 96%.

Group of orthologs #155. Best score 119 bits
Score difference with first non-orthologous sequence - A.capsulata:32 M.jannaschii:119

C0NN00              	100.00%		Q58718              	100.00%
Bootstrap support for C0NN00 as seed ortholog is 84%.
Bootstrap support for Q58718 as seed ortholog is 100%.

Group of orthologs #156. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 M.jannaschii:118

C0NQI6              	100.00%		Q58109              	100.00%
Bootstrap support for C0NQI6 as seed ortholog is 100%.
Bootstrap support for Q58109 as seed ortholog is 100%.

Group of orthologs #157. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:54 M.jannaschii:116

C0NLL4              	100.00%		Q57757              	100.00%
C0NLY2              	100.00%		
Bootstrap support for C0NLL4 as seed ortholog is 91%.
Bootstrap support for C0NLY2 as seed ortholog is 93%.
Bootstrap support for Q57757 as seed ortholog is 100%.

Group of orthologs #158. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 M.jannaschii:116

C0NPZ2              	100.00%		Q57581              	100.00%
Bootstrap support for C0NPZ2 as seed ortholog is 100%.
Bootstrap support for Q57581 as seed ortholog is 100%.

Group of orthologs #159. Best score 115 bits
Score difference with first non-orthologous sequence - A.capsulata:115 M.jannaschii:115

C0NBL2              	100.00%		P54057              	100.00%
Bootstrap support for C0NBL2 as seed ortholog is 100%.
Bootstrap support for P54057 as seed ortholog is 100%.

Group of orthologs #160. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:4 M.jannaschii:114

C0NDH6              	100.00%		Q58761              	100.00%
C0NKX2              	20.02%		
Bootstrap support for C0NDH6 as seed ortholog is 45%.
Alternative seed ortholog is C0NJY6 (4 bits away from this cluster)
Bootstrap support for Q58761 as seed ortholog is 100%.

Group of orthologs #161. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:112 M.jannaschii:112

C0NFR7              	100.00%		Q58032              	100.00%
Bootstrap support for C0NFR7 as seed ortholog is 100%.
Bootstrap support for Q58032 as seed ortholog is 100%.

Group of orthologs #162. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:111 M.jannaschii:111

C0NDT9              	100.00%		Q60357              	100.00%
Bootstrap support for C0NDT9 as seed ortholog is 100%.
Bootstrap support for Q60357 as seed ortholog is 100%.

Group of orthologs #163. Best score 110 bits
Score difference with first non-orthologous sequence - A.capsulata:110 M.jannaschii:110

C0P0E1              	100.00%		P61159              	100.00%
                    	       		Q60314              	12.76%
Bootstrap support for C0P0E1 as seed ortholog is 100%.
Bootstrap support for P61159 as seed ortholog is 100%.

Group of orthologs #164. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 M.jannaschii:109

C0NQR6              	100.00%		P54042              	100.00%
Bootstrap support for C0NQR6 as seed ortholog is 100%.
Bootstrap support for P54042 as seed ortholog is 100%.

Group of orthologs #165. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 M.jannaschii:109

C0NPG2              	100.00%		Q58087              	100.00%
Bootstrap support for C0NPG2 as seed ortholog is 100%.
Bootstrap support for Q58087 as seed ortholog is 100%.

Group of orthologs #166. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 M.jannaschii:108

C0NIU4              	100.00%		Q57625              	100.00%
Bootstrap support for C0NIU4 as seed ortholog is 100%.
Bootstrap support for Q57625 as seed ortholog is 100%.

Group of orthologs #167. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 M.jannaschii:108

C0NJV7              	100.00%		Q57675              	100.00%
Bootstrap support for C0NJV7 as seed ortholog is 100%.
Bootstrap support for Q57675 as seed ortholog is 100%.

Group of orthologs #168. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 M.jannaschii:106

C0ND28              	100.00%		Q58294              	100.00%
Bootstrap support for C0ND28 as seed ortholog is 100%.
Bootstrap support for Q58294 as seed ortholog is 100%.

Group of orthologs #169. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 M.jannaschii:106

C0NSF3              	100.00%		Q58018              	100.00%
Bootstrap support for C0NSF3 as seed ortholog is 100%.
Bootstrap support for Q58018 as seed ortholog is 100%.

Group of orthologs #170. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 M.jannaschii:106

C0NTE1              	100.00%		Q58660              	100.00%
Bootstrap support for C0NTE1 as seed ortholog is 100%.
Bootstrap support for Q58660 as seed ortholog is 100%.

Group of orthologs #171. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 M.jannaschii:105

C0NE70              	100.00%		Q58054              	100.00%
Bootstrap support for C0NE70 as seed ortholog is 100%.
Bootstrap support for Q58054 as seed ortholog is 100%.

Group of orthologs #172. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 M.jannaschii:104

C0NE84              	100.00%		Q57679              	100.00%
Bootstrap support for C0NE84 as seed ortholog is 100%.
Bootstrap support for Q57679 as seed ortholog is 100%.

Group of orthologs #173. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 M.jannaschii:102

C0NCL3              	100.00%		Q58739              	100.00%
                    	       		Q60366              	27.03%
Bootstrap support for C0NCL3 as seed ortholog is 100%.
Bootstrap support for Q58739 as seed ortholog is 100%.

Group of orthologs #174. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 M.jannaschii:32

C0NVD4              	100.00%		Q57749              	100.00%
Bootstrap support for C0NVD4 as seed ortholog is 100%.
Bootstrap support for Q57749 as seed ortholog is 79%.

Group of orthologs #175. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:37 M.jannaschii:101

C0NH90              	100.00%		Q58276              	100.00%
Bootstrap support for C0NH90 as seed ortholog is 91%.
Bootstrap support for Q58276 as seed ortholog is 100%.

Group of orthologs #176. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:100 M.jannaschii:100

C0NIY1              	100.00%		Q57636              	100.00%
Bootstrap support for C0NIY1 as seed ortholog is 100%.
Bootstrap support for Q57636 as seed ortholog is 100%.

Group of orthologs #177. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:12 M.jannaschii:99

C0NSE7              	100.00%		Q58634              	100.00%
Bootstrap support for C0NSE7 as seed ortholog is 64%.
Alternative seed ortholog is C0NCT8 (12 bits away from this cluster)
Bootstrap support for Q58634 as seed ortholog is 100%.

Group of orthologs #178. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 M.jannaschii:48

C0NIA2              	100.00%		Q58874              	100.00%
Bootstrap support for C0NIA2 as seed ortholog is 100%.
Bootstrap support for Q58874 as seed ortholog is 86%.

Group of orthologs #179. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:30 M.jannaschii:97

C0NMW5              	100.00%		Q60358              	100.00%
Bootstrap support for C0NMW5 as seed ortholog is 72%.
Alternative seed ortholog is C0NX41 (30 bits away from this cluster)
Bootstrap support for Q60358 as seed ortholog is 100%.

Group of orthologs #180. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 M.jannaschii:96

C0NIL8              	100.00%		Q58504              	100.00%
Bootstrap support for C0NIL8 as seed ortholog is 100%.
Bootstrap support for Q58504 as seed ortholog is 100%.

Group of orthologs #181. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 M.jannaschii:96

C0NVE6              	100.00%		P54024              	100.00%
Bootstrap support for C0NVE6 as seed ortholog is 100%.
Bootstrap support for P54024 as seed ortholog is 100%.

Group of orthologs #182. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 M.jannaschii:96

C0NYM4              	100.00%		P54036              	100.00%
Bootstrap support for C0NYM4 as seed ortholog is 100%.
Bootstrap support for P54036 as seed ortholog is 100%.

Group of orthologs #183. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:95 M.jannaschii:95

C0NHB9              	100.00%		Q60364              	100.00%
Bootstrap support for C0NHB9 as seed ortholog is 100%.
Bootstrap support for Q60364 as seed ortholog is 100%.

Group of orthologs #184. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 M.jannaschii:94

C0NMG3              	100.00%		Q57936              	100.00%
C0NA22              	44.56%		Q58758              	31.75%
Bootstrap support for C0NMG3 as seed ortholog is 100%.
Bootstrap support for Q57936 as seed ortholog is 100%.

Group of orthologs #185. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 M.jannaschii:42

C0NEB4              	100.00%		Q59002              	100.00%
Bootstrap support for C0NEB4 as seed ortholog is 100%.
Bootstrap support for Q59002 as seed ortholog is 87%.

Group of orthologs #186. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 M.jannaschii:94

C0NRR6              	100.00%		Q58998              	100.00%
Bootstrap support for C0NRR6 as seed ortholog is 100%.
Bootstrap support for Q58998 as seed ortholog is 100%.

Group of orthologs #187. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 M.jannaschii:94

C0NTZ0              	100.00%		Q58370              	100.00%
Bootstrap support for C0NTZ0 as seed ortholog is 100%.
Bootstrap support for Q58370 as seed ortholog is 100%.

Group of orthologs #188. Best score 93 bits
Score difference with first non-orthologous sequence - A.capsulata:93 M.jannaschii:93

C0NCZ8              	100.00%		Q57907              	100.00%
Bootstrap support for C0NCZ8 as seed ortholog is 100%.
Bootstrap support for Q57907 as seed ortholog is 100%.

Group of orthologs #189. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 M.jannaschii:92

C0NDH1              	100.00%		Q60176              	100.00%
C0P046              	46.38%		
Bootstrap support for C0NDH1 as seed ortholog is 100%.
Bootstrap support for Q60176 as seed ortholog is 100%.

Group of orthologs #190. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 M.jannaschii:92

C0NAH4              	100.00%		Q58487              	100.00%
Bootstrap support for C0NAH4 as seed ortholog is 100%.
Bootstrap support for Q58487 as seed ortholog is 100%.

Group of orthologs #191. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 M.jannaschii:92

C0NKI2              	100.00%		P54050              	100.00%
Bootstrap support for C0NKI2 as seed ortholog is 100%.
Bootstrap support for P54050 as seed ortholog is 100%.

Group of orthologs #192. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 M.jannaschii:92

C0NM32              	100.00%		Q59055              	100.00%
Bootstrap support for C0NM32 as seed ortholog is 100%.
Bootstrap support for Q59055 as seed ortholog is 100%.

Group of orthologs #193. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 M.jannaschii:92

C0NSX6              	100.00%		P54038              	100.00%
Bootstrap support for C0NSX6 as seed ortholog is 100%.
Bootstrap support for P54038 as seed ortholog is 100%.

Group of orthologs #194. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:40 M.jannaschii:92

C0NRA4              	100.00%		Q58270              	100.00%
Bootstrap support for C0NRA4 as seed ortholog is 86%.
Bootstrap support for Q58270 as seed ortholog is 100%.

Group of orthologs #195. Best score 90 bits
Score difference with first non-orthologous sequence - A.capsulata:90 M.jannaschii:90

C0NLM4              	100.00%		Q57695              	100.00%
C0NK71              	17.87%		
Bootstrap support for C0NLM4 as seed ortholog is 100%.
Bootstrap support for Q57695 as seed ortholog is 100%.

Group of orthologs #196. Best score 90 bits
Score difference with first non-orthologous sequence - A.capsulata:1 M.jannaschii:90

C0P1G6              	100.00%		Q58705              	100.00%
C0P1H4              	43.68%		
Bootstrap support for C0P1G6 as seed ortholog is 66%.
Alternative seed ortholog is C0P1G7 (1 bits away from this cluster)
Bootstrap support for Q58705 as seed ortholog is 100%.

Group of orthologs #197. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 M.jannaschii:43

C0NCX4              	100.00%		Q57884              	100.00%
Bootstrap support for C0NCX4 as seed ortholog is 100%.
Bootstrap support for Q57884 as seed ortholog is 91%.

Group of orthologs #198. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 M.jannaschii:86

C0NGZ9              	100.00%		Q58597              	100.00%
C0NEJ3              	17.24%		
Bootstrap support for C0NGZ9 as seed ortholog is 100%.
Bootstrap support for Q58597 as seed ortholog is 100%.

Group of orthologs #199. Best score 85 bits
Score difference with first non-orthologous sequence - A.capsulata:85 M.jannaschii:85

C0NPG1              	100.00%		Q58343              	100.00%
Bootstrap support for C0NPG1 as seed ortholog is 100%.
Bootstrap support for Q58343 as seed ortholog is 100%.

Group of orthologs #200. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:15 M.jannaschii:84

C0NC43              	100.00%		P54030              	100.00%
Bootstrap support for C0NC43 as seed ortholog is 73%.
Alternative seed ortholog is C0NFT0 (15 bits away from this cluster)
Bootstrap support for P54030 as seed ortholog is 100%.

Group of orthologs #201. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 M.jannaschii:84

C0NL48              	100.00%		Q58352              	100.00%
Bootstrap support for C0NL48 as seed ortholog is 100%.
Bootstrap support for Q58352 as seed ortholog is 100%.

Group of orthologs #202. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 M.jannaschii:84

C0NYF4              	100.00%		Q57599              	100.00%
Bootstrap support for C0NYF4 as seed ortholog is 100%.
Bootstrap support for Q57599 as seed ortholog is 100%.

Group of orthologs #203. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 M.jannaschii:84

C0NXT6              	100.00%		Q57977              	100.00%
Bootstrap support for C0NXT6 as seed ortholog is 100%.
Bootstrap support for Q57977 as seed ortholog is 100%.

Group of orthologs #204. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:8 M.jannaschii:84

C0NZ31              	100.00%		Q58936              	100.00%
Bootstrap support for C0NZ31 as seed ortholog is 56%.
Alternative seed ortholog is C0NPD1 (8 bits away from this cluster)
Bootstrap support for Q58936 as seed ortholog is 100%.

Group of orthologs #205. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 M.jannaschii:83

C0NMW8              	100.00%		Q60363              	100.00%
Bootstrap support for C0NMW8 as seed ortholog is 100%.
Bootstrap support for Q60363 as seed ortholog is 100%.

Group of orthologs #206. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 M.jannaschii:82

C0NYR7              	100.00%		Q58172              	100.00%
                    	       		Q57996              	84.62%
Bootstrap support for C0NYR7 as seed ortholog is 100%.
Bootstrap support for Q58172 as seed ortholog is 100%.

Group of orthologs #207. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 M.jannaschii:82

C0NM49              	100.00%		Q58464              	100.00%
Bootstrap support for C0NM49 as seed ortholog is 100%.
Bootstrap support for Q58464 as seed ortholog is 100%.

Group of orthologs #208. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 M.jannaschii:82

C0NZD2              	100.00%		P54029              	100.00%
Bootstrap support for C0NZD2 as seed ortholog is 100%.
Bootstrap support for P54029 as seed ortholog is 100%.

Group of orthologs #209. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 M.jannaschii:82

C0NZZ0              	100.00%		Q59000              	100.00%
Bootstrap support for C0NZZ0 as seed ortholog is 100%.
Bootstrap support for Q59000 as seed ortholog is 100%.

Group of orthologs #210. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 M.jannaschii:81

C0NVE3              	100.00%		Q58029              	100.00%
Bootstrap support for C0NVE3 as seed ortholog is 100%.
Bootstrap support for Q58029 as seed ortholog is 100%.

Group of orthologs #211. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 M.jannaschii:81

C0NU34              	100.00%		Q58619              	100.00%
Bootstrap support for C0NU34 as seed ortholog is 100%.
Bootstrap support for Q58619 as seed ortholog is 100%.

Group of orthologs #212. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 M.jannaschii:80

C0NF18              	100.00%		Q58216              	100.00%
C0NIF0              	25.42%		
Bootstrap support for C0NF18 as seed ortholog is 100%.
Bootstrap support for Q58216 as seed ortholog is 100%.

Group of orthologs #213. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 M.jannaschii:80

C0NWA6              	100.00%		P54051              	100.00%
Bootstrap support for C0NWA6 as seed ortholog is 100%.
Bootstrap support for P54051 as seed ortholog is 100%.

Group of orthologs #214. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 M.jannaschii:79

C0NBA2              	100.00%		Q57955              	100.00%
C0NBF3              	34.22%		
Bootstrap support for C0NBA2 as seed ortholog is 100%.
Bootstrap support for Q57955 as seed ortholog is 100%.

Group of orthologs #215. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 M.jannaschii:78

C0NAA3              	100.00%		P54066              	100.00%
Bootstrap support for C0NAA3 as seed ortholog is 100%.
Bootstrap support for P54066 as seed ortholog is 100%.

Group of orthologs #216. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:8 M.jannaschii:77

C0NBU9              	100.00%		Q57891              	100.00%
Bootstrap support for C0NBU9 as seed ortholog is 59%.
Alternative seed ortholog is C0NES6 (8 bits away from this cluster)
Bootstrap support for Q57891 as seed ortholog is 100%.

Group of orthologs #217. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 M.jannaschii:77

C0NE75              	100.00%		P54016              	100.00%
Bootstrap support for C0NE75 as seed ortholog is 100%.
Bootstrap support for P54016 as seed ortholog is 100%.

Group of orthologs #218. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 M.jannaschii:77

C0NT51              	100.00%		Q58481              	100.00%
Bootstrap support for C0NT51 as seed ortholog is 100%.
Bootstrap support for Q58481 as seed ortholog is 100%.

Group of orthologs #219. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 M.jannaschii:76

C0NUJ2              	100.00%		Q58497              	100.00%
Bootstrap support for C0NUJ2 as seed ortholog is 100%.
Bootstrap support for Q58497 as seed ortholog is 100%.

Group of orthologs #220. Best score 75 bits
Score difference with first non-orthologous sequence - A.capsulata:75 M.jannaschii:75

C0NM44              	100.00%		Q59069              	100.00%
Bootstrap support for C0NM44 as seed ortholog is 100%.
Bootstrap support for Q59069 as seed ortholog is 100%.

Group of orthologs #221. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 M.jannaschii:74

C0NV40              	100.00%		Q58500              	100.00%
                    	       		Q57842              	11.71%
Bootstrap support for C0NV40 as seed ortholog is 100%.
Bootstrap support for Q58500 as seed ortholog is 100%.

Group of orthologs #222. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 M.jannaschii:74

C0NJH0              	100.00%		Q58827              	100.00%
Bootstrap support for C0NJH0 as seed ortholog is 100%.
Bootstrap support for Q58827 as seed ortholog is 100%.

Group of orthologs #223. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 M.jannaschii:74

C0P0F6              	100.00%		P54059              	100.00%
Bootstrap support for C0P0F6 as seed ortholog is 100%.
Bootstrap support for P54059 as seed ortholog is 100%.

Group of orthologs #224. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:20 M.jannaschii:72

C0P198              	100.00%		Q58026              	100.00%
C0NK82              	6.30%		
Bootstrap support for C0P198 as seed ortholog is 65%.
Alternative seed ortholog is C0NWS6 (20 bits away from this cluster)
Bootstrap support for Q58026 as seed ortholog is 100%.

Group of orthologs #225. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:72 M.jannaschii:72

C0NWM3              	100.00%		P54010              	100.00%
Bootstrap support for C0NWM3 as seed ortholog is 100%.
Bootstrap support for P54010 as seed ortholog is 100%.

Group of orthologs #226. Best score 70 bits
Score difference with first non-orthologous sequence - A.capsulata:9 M.jannaschii:70

C0NEJ7              	100.00%		Q58065              	100.00%
Bootstrap support for C0NEJ7 as seed ortholog is 69%.
Alternative seed ortholog is C0NTD3 (9 bits away from this cluster)
Bootstrap support for Q58065 as seed ortholog is 100%.

Group of orthologs #227. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 M.jannaschii:69

C0NFE2              	100.00%		Q58622              	100.00%
Bootstrap support for C0NFE2 as seed ortholog is 100%.
Bootstrap support for Q58622 as seed ortholog is 100%.

Group of orthologs #228. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 M.jannaschii:69

C0NUY8              	100.00%		Q58997              	100.00%
Bootstrap support for C0NUY8 as seed ortholog is 100%.
Bootstrap support for Q58997 as seed ortholog is 100%.

Group of orthologs #229. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:9 M.jannaschii:68

C0NMD6              	100.00%		Q58860              	100.00%
C0NG61              	6.30%		
Bootstrap support for C0NMD6 as seed ortholog is 47%.
Alternative seed ortholog is C0NUL1 (9 bits away from this cluster)
Bootstrap support for Q58860 as seed ortholog is 100%.

Group of orthologs #230. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:18 M.jannaschii:68

C0NZD6              	100.00%		Q58931              	100.00%
Bootstrap support for C0NZD6 as seed ortholog is 34%.
Alternative seed ortholog is C0NS96 (18 bits away from this cluster)
Bootstrap support for Q58931 as seed ortholog is 100%.

Group of orthologs #231. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 M.jannaschii:67

C0NJW6              	100.00%		Q58060              	100.00%
Bootstrap support for C0NJW6 as seed ortholog is 100%.
Bootstrap support for Q58060 as seed ortholog is 100%.

Group of orthologs #232. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:26 M.jannaschii:66

C0NUU3              	100.00%		Q58813              	100.00%
C0NL21              	26.87%		
C0NFN1              	15.12%		
Bootstrap support for C0NUU3 as seed ortholog is 78%.
Bootstrap support for Q58813 as seed ortholog is 100%.

Group of orthologs #233. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:65 M.jannaschii:65

C0NAB3              	100.00%		Q58892              	100.00%
Bootstrap support for C0NAB3 as seed ortholog is 100%.
Bootstrap support for Q58892 as seed ortholog is 100%.

Group of orthologs #234. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:64 M.jannaschii:64

C0NIS9              	100.00%		Q58977              	100.00%
Bootstrap support for C0NIS9 as seed ortholog is 100%.
Bootstrap support for Q58977 as seed ortholog is 100%.

Group of orthologs #235. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:64 M.jannaschii:64

C0NQ40              	100.00%		Q58987              	100.00%
Bootstrap support for C0NQ40 as seed ortholog is 100%.
Bootstrap support for Q58987 as seed ortholog is 100%.

Group of orthologs #236. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:64 M.jannaschii:64

C0NSS1              	100.00%		Q58625              	100.00%
Bootstrap support for C0NSS1 as seed ortholog is 100%.
Bootstrap support for Q58625 as seed ortholog is 100%.

Group of orthologs #237. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 M.jannaschii:63

C0NJY5              	100.00%		P54067              	100.00%
Bootstrap support for C0NJY5 as seed ortholog is 100%.
Bootstrap support for P54067 as seed ortholog is 100%.

Group of orthologs #238. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 M.jannaschii:62

C0NMP8              	100.00%		Q58040              	100.00%
Bootstrap support for C0NMP8 as seed ortholog is 100%.
Bootstrap support for Q58040 as seed ortholog is 100%.

Group of orthologs #239. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 M.jannaschii:62

C0NQ86              	100.00%		Q57887              	100.00%
Bootstrap support for C0NQ86 as seed ortholog is 100%.
Bootstrap support for Q57887 as seed ortholog is 100%.

Group of orthologs #240. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:61 M.jannaschii:61

C0NQX7              	100.00%		Q58916              	100.00%
                    	       		Q60362              	43.95%
Bootstrap support for C0NQX7 as seed ortholog is 100%.
Bootstrap support for Q58916 as seed ortholog is 100%.

Group of orthologs #241. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:7 M.jannaschii:61

C0NG73              	100.00%		Q57840              	100.00%
Bootstrap support for C0NG73 as seed ortholog is 60%.
Alternative seed ortholog is C0NFX0 (7 bits away from this cluster)
Bootstrap support for Q57840 as seed ortholog is 100%.

Group of orthologs #242. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 M.jannaschii:59

C0NFY5              	100.00%		Q58920              	100.00%
Bootstrap support for C0NFY5 as seed ortholog is 100%.
Bootstrap support for Q58920 as seed ortholog is 100%.

Group of orthologs #243. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 M.jannaschii:57

C0NQY6              	100.00%		Q58927              	100.00%
                    	       		Q58114              	12.10%
Bootstrap support for C0NQY6 as seed ortholog is 100%.
Bootstrap support for Q58927 as seed ortholog is 100%.

Group of orthologs #244. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 M.jannaschii:57

C0NJV0              	100.00%		Q59005              	100.00%
Bootstrap support for C0NJV0 as seed ortholog is 100%.
Bootstrap support for Q59005 as seed ortholog is 100%.

Group of orthologs #245. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:4 M.jannaschii:56

C0NC80              	100.00%		Q58925              	100.00%
C0NMR3              	6.18%		
Bootstrap support for C0NC80 as seed ortholog is 56%.
Alternative seed ortholog is C0NGL0 (4 bits away from this cluster)
Bootstrap support for Q58925 as seed ortholog is 100%.

Group of orthologs #246. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 M.jannaschii:56

C0NIH3              	100.00%		Q58414              	100.00%
C0NQG3              	8.13%		
Bootstrap support for C0NIH3 as seed ortholog is 100%.
Bootstrap support for Q58414 as seed ortholog is 100%.

Group of orthologs #247. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 M.jannaschii:56

C0NQJ6              	100.00%		Q58092              	100.00%
C0NZ02              	18.27%		
Bootstrap support for C0NQJ6 as seed ortholog is 100%.
Bootstrap support for Q58092 as seed ortholog is 100%.

Group of orthologs #248. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 M.jannaschii:56

C0NBJ7              	100.00%		P54053              	100.00%
Bootstrap support for C0NBJ7 as seed ortholog is 100%.
Bootstrap support for P54053 as seed ortholog is 100%.

Group of orthologs #249. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 M.jannaschii:56

C0NTM9              	100.00%		Q57741              	100.00%
Bootstrap support for C0NTM9 as seed ortholog is 100%.
Bootstrap support for Q57741 as seed ortholog is 100%.

Group of orthologs #250. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 M.jannaschii:54

C0NCJ5              	100.00%		P54110              	100.00%
Bootstrap support for C0NCJ5 as seed ortholog is 100%.
Bootstrap support for P54110 as seed ortholog is 100%.

Group of orthologs #251. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 M.jannaschii:54

C0NMF6              	100.00%		P54022              	100.00%
Bootstrap support for C0NMF6 as seed ortholog is 100%.
Bootstrap support for P54022 as seed ortholog is 100%.

Group of orthologs #252. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 M.jannaschii:54

C0NYW7              	100.00%		Q58716              	100.00%
Bootstrap support for C0NYW7 as seed ortholog is 100%.
Bootstrap support for Q58716 as seed ortholog is 100%.

Group of orthologs #253. Best score 53 bits
Score difference with first non-orthologous sequence - A.capsulata:53 M.jannaschii:53

C0NLR4              	100.00%		P54013              	100.00%
Bootstrap support for C0NLR4 as seed ortholog is 100%.
Bootstrap support for P54013 as seed ortholog is 100%.

Group of orthologs #254. Best score 53 bits
Score difference with first non-orthologous sequence - A.capsulata:53 M.jannaschii:53

C0NXA5              	100.00%		P54046              	100.00%
Bootstrap support for C0NXA5 as seed ortholog is 100%.
Bootstrap support for P54046 as seed ortholog is 100%.

Group of orthologs #255. Best score 53 bits
Score difference with first non-orthologous sequence - A.capsulata:1 M.jannaschii:53

C0NUV3              	100.00%		Q58548              	100.00%
Bootstrap support for C0NUV3 as seed ortholog is 52%.
Alternative seed ortholog is C0NM38 (1 bits away from this cluster)
Bootstrap support for Q58548 as seed ortholog is 100%.

Group of orthologs #256. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 M.jannaschii:52

C0NBC8              	100.00%		Q58970              	100.00%
                    	       		Q57690              	16.72%
Bootstrap support for C0NBC8 as seed ortholog is 100%.
Bootstrap support for Q58970 as seed ortholog is 100%.

Group of orthologs #257. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 M.jannaschii:52

C0NV82              	100.00%		Q58922              	100.00%
                    	       		Q58838              	29.07%
Bootstrap support for C0NV82 as seed ortholog is 100%.
Bootstrap support for Q58922 as seed ortholog is 100%.

Group of orthologs #258. Best score 51 bits
Score difference with first non-orthologous sequence - A.capsulata:51 M.jannaschii:51

C0NVQ4              	100.00%		Q57846              	100.00%
Bootstrap support for C0NVQ4 as seed ortholog is 100%.
Bootstrap support for Q57846 as seed ortholog is 100%.

Group of orthologs #259. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 M.jannaschii:50

C0NCQ0              	100.00%		Q58338              	100.00%
                    	       		Q58292              	7.37%
Bootstrap support for C0NCQ0 as seed ortholog is 100%.
Bootstrap support for Q58338 as seed ortholog is 100%.

Group of orthologs #260. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 M.jannaschii:50

C0NCP3              	100.00%		P54061              	100.00%
Bootstrap support for C0NCP3 as seed ortholog is 100%.
Bootstrap support for P54061 as seed ortholog is 100%.

Group of orthologs #261. Best score 49 bits
Score difference with first non-orthologous sequence - A.capsulata:49 M.jannaschii:49

C0NFP2              	100.00%		Q58735              	100.00%
C0NPH4              	21.70%		
C0P0C9              	20.88%		
C0NYV5              	20.05%		
C0NUK0              	19.23%		
C0P083              	19.23%		
C0NYG4              	16.21%		
C0P0H3              	13.74%		
C0NNY9              	13.46%		
C0NHE6              	12.36%		
C0NW21              	11.81%		
C0NMB6              	9.62%		
C0NIZ6              	8.24%		
C0NQ52              	7.42%		
C0NU27              	6.87%		
C0NPJ8              	6.04%		
C0NLY0              	5.49%		
Bootstrap support for C0NFP2 as seed ortholog is 100%.
Bootstrap support for Q58735 as seed ortholog is 100%.

Group of orthologs #262. Best score 49 bits
Score difference with first non-orthologous sequence - A.capsulata:49 M.jannaschii:49

C0NE98              	100.00%		Q59049              	100.00%
Bootstrap support for C0NE98 as seed ortholog is 100%.
Bootstrap support for Q59049 as seed ortholog is 100%.

Group of orthologs #263. Best score 48 bits
Score difference with first non-orthologous sequence - A.capsulata:48 M.jannaschii:48

C0NXQ7              	100.00%		P54028              	100.00%
Bootstrap support for C0NXQ7 as seed ortholog is 100%.
Bootstrap support for P54028 as seed ortholog is 100%.

Group of orthologs #264. Best score 47 bits
Score difference with first non-orthologous sequence - A.capsulata:47 M.jannaschii:47

C0NA64              	100.00%		Q58509              	100.00%
Bootstrap support for C0NA64 as seed ortholog is 100%.
Bootstrap support for Q58509 as seed ortholog is 100%.

Group of orthologs #265. Best score 45 bits
Score difference with first non-orthologous sequence - A.capsulata:45 M.jannaschii:45

C0NMT7              	100.00%		Q58377              	100.00%
Bootstrap support for C0NMT7 as seed ortholog is 100%.
Bootstrap support for Q58377 as seed ortholog is 100%.

Group of orthologs #266. Best score 44 bits
Score difference with first non-orthologous sequence - A.capsulata:44 M.jannaschii:44

C0NZW5              	100.00%		Q57832              	100.00%
Bootstrap support for C0NZW5 as seed ortholog is 100%.
Bootstrap support for Q57832 as seed ortholog is 100%.

Group of orthologs #267. Best score 44 bits
Score difference with first non-orthologous sequence - A.capsulata:44 M.jannaschii:44

C0NY54              	100.00%		Q58452              	100.00%
Bootstrap support for C0NY54 as seed ortholog is 100%.
Bootstrap support for Q58452 as seed ortholog is 100%.

Group of orthologs #268. Best score 41 bits
Score difference with first non-orthologous sequence - A.capsulata:41 M.jannaschii:41

C0P132              	100.00%		Q57751              	100.00%
Bootstrap support for C0P132 as seed ortholog is 100%.
Bootstrap support for Q57751 as seed ortholog is 100%.