###################################
164 groups of orthologs
199 in-paralogs from A.capsulata
165 in-paralogs from C.trachomatis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 855 bits
Score difference with first non-orthologous sequence - A.capsulata:575 C.trachomatis:855

C0NL66              	100.00%		O84022              	100.00%
Bootstrap support for C0NL66 as seed ortholog is 100%.
Bootstrap support for O84022 as seed ortholog is 100%.

Group of orthologs #2. Best score 743 bits
Score difference with first non-orthologous sequence - A.capsulata:743 C.trachomatis:743

C0NRD2              	100.00%		O84250              	100.00%
Bootstrap support for C0NRD2 as seed ortholog is 100%.
Bootstrap support for O84250 as seed ortholog is 100%.

Group of orthologs #3. Best score 686 bits
Score difference with first non-orthologous sequence - A.capsulata:255 C.trachomatis:686

C0NLF6              	100.00%		O84348              	100.00%
Bootstrap support for C0NLF6 as seed ortholog is 99%.
Bootstrap support for O84348 as seed ortholog is 100%.

Group of orthologs #4. Best score 685 bits
Score difference with first non-orthologous sequence - A.capsulata:21 C.trachomatis:169

C0NKY1              	100.00%		O84115              	100.00%
Bootstrap support for C0NKY1 as seed ortholog is 66%.
Alternative seed ortholog is C0NKB7 (21 bits away from this cluster)
Bootstrap support for O84115 as seed ortholog is 99%.

Group of orthologs #5. Best score 684 bits
Score difference with first non-orthologous sequence - A.capsulata:139 C.trachomatis:627

C0P013              	100.00%		P17821              	100.00%
Bootstrap support for C0P013 as seed ortholog is 99%.
Bootstrap support for P17821 as seed ortholog is 100%.

Group of orthologs #6. Best score 547 bits
Score difference with first non-orthologous sequence - A.capsulata:465 C.trachomatis:362

C0P0B3              	100.00%		P0C0Z7              	100.00%
Bootstrap support for C0P0B3 as seed ortholog is 100%.
Bootstrap support for P0C0Z7 as seed ortholog is 100%.

Group of orthologs #7. Best score 529 bits
Score difference with first non-orthologous sequence - A.capsulata:529 C.trachomatis:529

C0NJQ4              	100.00%		O84057              	100.00%
Bootstrap support for C0NJQ4 as seed ortholog is 100%.
Bootstrap support for O84057 as seed ortholog is 100%.

Group of orthologs #8. Best score 510 bits
Score difference with first non-orthologous sequence - A.capsulata:143 C.trachomatis:510

C0NUK7              	100.00%		O84444              	100.00%
Bootstrap support for C0NUK7 as seed ortholog is 99%.
Bootstrap support for O84444 as seed ortholog is 100%.

Group of orthologs #9. Best score 505 bits
Score difference with first non-orthologous sequence - A.capsulata:372 C.trachomatis:505

C0NG27              	100.00%		O84304              	100.00%
Bootstrap support for C0NG27 as seed ortholog is 100%.
Bootstrap support for O84304 as seed ortholog is 100%.

Group of orthologs #10. Best score 500 bits
Score difference with first non-orthologous sequence - A.capsulata:372 C.trachomatis:500

C0NZL9              	100.00%		O84067              	100.00%
Bootstrap support for C0NZL9 as seed ortholog is 100%.
Bootstrap support for O84067 as seed ortholog is 100%.

Group of orthologs #11. Best score 485 bits
Score difference with first non-orthologous sequence - A.capsulata:485 C.trachomatis:485

C0NIM9              	100.00%		O84834              	100.00%
Bootstrap support for C0NIM9 as seed ortholog is 100%.
Bootstrap support for O84834 as seed ortholog is 100%.

Group of orthologs #12. Best score 483 bits
Score difference with first non-orthologous sequence - A.capsulata:483 C.trachomatis:483

C0NZR4              	100.00%		O84211              	100.00%
Bootstrap support for C0NZR4 as seed ortholog is 100%.
Bootstrap support for O84211 as seed ortholog is 100%.

Group of orthologs #13. Best score 467 bits
Score difference with first non-orthologous sequence - A.capsulata:467 C.trachomatis:467

C0NKL8              	100.00%		O84754              	100.00%
Bootstrap support for C0NKL8 as seed ortholog is 100%.
Bootstrap support for O84754 as seed ortholog is 100%.

Group of orthologs #14. Best score 466 bits
Score difference with first non-orthologous sequence - A.capsulata:466 C.trachomatis:466

C0NI02              	100.00%		O84755              	100.00%
Bootstrap support for C0NI02 as seed ortholog is 100%.
Bootstrap support for O84755 as seed ortholog is 100%.

Group of orthologs #15. Best score 462 bits
Score difference with first non-orthologous sequence - A.capsulata:462 C.trachomatis:462

C0NZU1              	100.00%		P0CD73              	100.00%
Bootstrap support for C0NZU1 as seed ortholog is 100%.
Bootstrap support for P0CD73 as seed ortholog is 100%.

Group of orthologs #16. Best score 451 bits
Score difference with first non-orthologous sequence - A.capsulata:294 C.trachomatis:451

C0NJ54              	100.00%		P0CD71              	100.00%
Bootstrap support for C0NJ54 as seed ortholog is 100%.
Bootstrap support for P0CD71 as seed ortholog is 100%.

Group of orthologs #17. Best score 450 bits
Score difference with first non-orthologous sequence - A.capsulata:450 C.trachomatis:450

C0NRH1              	100.00%		O84863              	100.00%
Bootstrap support for C0NRH1 as seed ortholog is 100%.
Bootstrap support for O84863 as seed ortholog is 100%.

Group of orthologs #18. Best score 422 bits
Score difference with first non-orthologous sequence - A.capsulata:107 C.trachomatis:422

C0NGZ9              	100.00%		O84585              	100.00%
Bootstrap support for C0NGZ9 as seed ortholog is 98%.
Bootstrap support for O84585 as seed ortholog is 100%.

Group of orthologs #19. Best score 417 bits
Score difference with first non-orthologous sequence - A.capsulata:417 C.trachomatis:417

C0NSB3              	100.00%		O84066              	100.00%
Bootstrap support for C0NSB3 as seed ortholog is 100%.
Bootstrap support for O84066 as seed ortholog is 100%.

Group of orthologs #20. Best score 414 bits
Score difference with first non-orthologous sequence - A.capsulata:414 C.trachomatis:414

C0NGZ7              	100.00%		O84848              	100.00%
C0NJR6              	100.00%		
Bootstrap support for C0NGZ7 as seed ortholog is 100%.
Bootstrap support for C0NJR6 as seed ortholog is 100%.
Bootstrap support for O84848 as seed ortholog is 100%.

Group of orthologs #21. Best score 395 bits
Score difference with first non-orthologous sequence - A.capsulata:395 C.trachomatis:395

C0NDY9              	100.00%		Q59321              	100.00%
Bootstrap support for C0NDY9 as seed ortholog is 100%.
Bootstrap support for Q59321 as seed ortholog is 100%.

Group of orthologs #22. Best score 393 bits
Score difference with first non-orthologous sequence - A.capsulata:243 C.trachomatis:393

C0NGH3              	100.00%		O84098              	100.00%
Bootstrap support for C0NGH3 as seed ortholog is 100%.
Bootstrap support for O84098 as seed ortholog is 100%.

Group of orthologs #23. Best score 362 bits
Score difference with first non-orthologous sequence - A.capsulata:362 C.trachomatis:362

C0NSJ2              	100.00%		O84172              	100.00%
Bootstrap support for C0NSJ2 as seed ortholog is 100%.
Bootstrap support for O84172 as seed ortholog is 100%.

Group of orthologs #24. Best score 358 bits
Score difference with first non-orthologous sequence - A.capsulata:358 C.trachomatis:358

C0NRN1              	100.00%		P0CE13              	100.00%
Bootstrap support for C0NRN1 as seed ortholog is 100%.
Bootstrap support for P0CE13 as seed ortholog is 100%.

Group of orthologs #25. Best score 354 bits
Score difference with first non-orthologous sequence - A.capsulata:354 C.trachomatis:354

C0NAB0              	100.00%		O84591              	100.00%
Bootstrap support for C0NAB0 as seed ortholog is 100%.
Bootstrap support for O84591 as seed ortholog is 100%.

Group of orthologs #26. Best score 354 bits
Score difference with first non-orthologous sequence - A.capsulata:354 C.trachomatis:354

C0NT97              	100.00%		O84310              	100.00%
Bootstrap support for C0NT97 as seed ortholog is 100%.
Bootstrap support for O84310 as seed ortholog is 100%.

Group of orthologs #27. Best score 316 bits
Score difference with first non-orthologous sequence - A.capsulata:127 C.trachomatis:316

C0NZ02              	100.00%		O84248              	100.00%
Bootstrap support for C0NZ02 as seed ortholog is 99%.
Bootstrap support for O84248 as seed ortholog is 100%.

Group of orthologs #28. Best score 311 bits
Score difference with first non-orthologous sequence - A.capsulata:311 C.trachomatis:311

C0NQY8              	100.00%		O84829              	100.00%
Bootstrap support for C0NQY8 as seed ortholog is 100%.
Bootstrap support for O84829 as seed ortholog is 100%.

Group of orthologs #29. Best score 310 bits
Score difference with first non-orthologous sequence - A.capsulata:139 C.trachomatis:310

C0NI62              	100.00%		O84786              	100.00%
Bootstrap support for C0NI62 as seed ortholog is 99%.
Bootstrap support for O84786 as seed ortholog is 100%.

Group of orthologs #30. Best score 305 bits
Score difference with first non-orthologous sequence - A.capsulata:233 C.trachomatis:305

C0P0P7              	100.00%		O84035              	100.00%
C0NQQ8              	46.45%		
Bootstrap support for C0P0P7 as seed ortholog is 100%.
Bootstrap support for O84035 as seed ortholog is 100%.

Group of orthologs #31. Best score 304 bits
Score difference with first non-orthologous sequence - A.capsulata:157 C.trachomatis:252

C0NZD6              	100.00%		O84561              	100.00%
Bootstrap support for C0NZD6 as seed ortholog is 99%.
Bootstrap support for O84561 as seed ortholog is 100%.

Group of orthologs #32. Best score 297 bits
Score difference with first non-orthologous sequence - A.capsulata:297 C.trachomatis:297

C0NJB1              	100.00%		P0CD78              	100.00%
Bootstrap support for C0NJB1 as seed ortholog is 100%.
Bootstrap support for P0CD78 as seed ortholog is 100%.

Group of orthologs #33. Best score 293 bits
Score difference with first non-orthologous sequence - A.capsulata:293 C.trachomatis:293

C0NAI8              	100.00%		O84831              	100.00%
Bootstrap support for C0NAI8 as seed ortholog is 100%.
Bootstrap support for O84831 as seed ortholog is 100%.

Group of orthologs #34. Best score 292 bits
Score difference with first non-orthologous sequence - A.capsulata:292 C.trachomatis:292

C0P131              	100.00%		O84823              	100.00%
Bootstrap support for C0P131 as seed ortholog is 100%.
Bootstrap support for O84823 as seed ortholog is 100%.

Group of orthologs #35. Best score 291 bits
Score difference with first non-orthologous sequence - A.capsulata:6 C.trachomatis:291

C0NG18              	100.00%		O84797              	100.00%
Bootstrap support for C0NG18 as seed ortholog is 52%.
Alternative seed ortholog is C0NWV4 (6 bits away from this cluster)
Bootstrap support for O84797 as seed ortholog is 100%.

Group of orthologs #36. Best score 282 bits
Score difference with first non-orthologous sequence - A.capsulata:282 C.trachomatis:282

C0NAS1              	100.00%		O84188              	100.00%
Bootstrap support for C0NAS1 as seed ortholog is 100%.
Bootstrap support for O84188 as seed ortholog is 100%.

Group of orthologs #37. Best score 275 bits
Score difference with first non-orthologous sequence - A.capsulata:180 C.trachomatis:275

C0NMK9              	100.00%		O84546              	100.00%
Bootstrap support for C0NMK9 as seed ortholog is 100%.
Bootstrap support for O84546 as seed ortholog is 100%.

Group of orthologs #38. Best score 270 bits
Score difference with first non-orthologous sequence - A.capsulata:270 C.trachomatis:270

C0NYR4              	100.00%		O84828              	100.00%
Bootstrap support for C0NYR4 as seed ortholog is 100%.
Bootstrap support for O84828 as seed ortholog is 100%.

Group of orthologs #39. Best score 269 bits
Score difference with first non-orthologous sequence - A.capsulata:269 C.trachomatis:269

C0NMB4              	100.00%		O84439              	100.00%
C0NGS5              	40.25%		
Bootstrap support for C0NMB4 as seed ortholog is 100%.
Bootstrap support for O84439 as seed ortholog is 100%.

Group of orthologs #40. Best score 265 bits
Score difference with first non-orthologous sequence - A.capsulata:265 C.trachomatis:265

C0NTZ0              	100.00%		O84315              	100.00%
Bootstrap support for C0NTZ0 as seed ortholog is 100%.
Bootstrap support for O84315 as seed ortholog is 100%.

Group of orthologs #41. Best score 264 bits
Score difference with first non-orthologous sequence - A.capsulata:264 C.trachomatis:264

C0NLY4              	100.00%		O84775              	100.00%
Bootstrap support for C0NLY4 as seed ortholog is 100%.
Bootstrap support for O84775 as seed ortholog is 100%.

Group of orthologs #42. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:260 C.trachomatis:260

C0NWL7              	100.00%		O84451              	100.00%
Bootstrap support for C0NWL7 as seed ortholog is 100%.
Bootstrap support for O84451 as seed ortholog is 100%.

Group of orthologs #43. Best score 259 bits
Score difference with first non-orthologous sequence - A.capsulata:259 C.trachomatis:259

C0P0A1              	100.00%		P0CE09              	100.00%
C0NB61              	16.96%		
C0NSE6              	5.48%		
Bootstrap support for C0P0A1 as seed ortholog is 100%.
Bootstrap support for P0CE09 as seed ortholog is 100%.

Group of orthologs #44. Best score 258 bits
Score difference with first non-orthologous sequence - A.capsulata:258 C.trachomatis:258

C0NZZ0              	100.00%		P0CD72              	100.00%
Bootstrap support for C0NZZ0 as seed ortholog is 100%.
Bootstrap support for P0CD72 as seed ortholog is 100%.

Group of orthologs #45. Best score 256 bits
Score difference with first non-orthologous sequence - A.capsulata:157 C.trachomatis:83

C0NZ91              	100.00%		O84058              	100.00%
Bootstrap support for C0NZ91 as seed ortholog is 100%.
Bootstrap support for O84058 as seed ortholog is 98%.

Group of orthologs #46. Best score 255 bits
Score difference with first non-orthologous sequence - A.capsulata:255 C.trachomatis:255

C0NZL8              	100.00%		O84316              	100.00%
C0NL49              	9.50%		
C0NEY2              	6.11%		
Bootstrap support for C0NZL8 as seed ortholog is 100%.
Bootstrap support for O84316 as seed ortholog is 100%.

Group of orthologs #47. Best score 252 bits
Score difference with first non-orthologous sequence - A.capsulata:61 C.trachomatis:252

C0NIG0              	100.00%		O84352              	100.00%
C0NDN3              	11.02%		
Bootstrap support for C0NIG0 as seed ortholog is 92%.
Bootstrap support for O84352 as seed ortholog is 100%.

Group of orthologs #48. Best score 250 bits
Score difference with first non-orthologous sequence - A.capsulata:250 C.trachomatis:250

C0NTW5              	100.00%		O84787              	100.00%
Bootstrap support for C0NTW5 as seed ortholog is 100%.
Bootstrap support for O84787 as seed ortholog is 100%.

Group of orthologs #49. Best score 250 bits
Score difference with first non-orthologous sequence - A.capsulata:158 C.trachomatis:250

C0NYZ7              	100.00%		O84006              	100.00%
Bootstrap support for C0NYZ7 as seed ortholog is 99%.
Bootstrap support for O84006 as seed ortholog is 100%.

Group of orthologs #50. Best score 242 bits
Score difference with first non-orthologous sequence - A.capsulata:242 C.trachomatis:242

C0NGC3              	100.00%		O84373              	100.00%
Bootstrap support for C0NGC3 as seed ortholog is 100%.
Bootstrap support for O84373 as seed ortholog is 100%.

Group of orthologs #51. Best score 241 bits
Score difference with first non-orthologous sequence - A.capsulata:115 C.trachomatis:80

C0NDH3              	100.00%		O84249              	100.00%
Bootstrap support for C0NDH3 as seed ortholog is 99%.
Bootstrap support for O84249 as seed ortholog is 96%.

Group of orthologs #52. Best score 237 bits
Score difference with first non-orthologous sequence - A.capsulata:237 C.trachomatis:237

C0NMW6              	100.00%		O84642              	100.00%
C0NCV0              	12.52%		
Bootstrap support for C0NMW6 as seed ortholog is 100%.
Bootstrap support for O84642 as seed ortholog is 100%.

Group of orthologs #53. Best score 233 bits
Score difference with first non-orthologous sequence - A.capsulata:156 C.trachomatis:233

C0NUQ9              	100.00%		O84596              	100.00%
Bootstrap support for C0NUQ9 as seed ortholog is 99%.
Bootstrap support for O84596 as seed ortholog is 100%.

Group of orthologs #54. Best score 232 bits
Score difference with first non-orthologous sequence - A.capsulata:51 C.trachomatis:232

C0NLF5              	100.00%		O84345              	100.00%
Bootstrap support for C0NLF5 as seed ortholog is 90%.
Bootstrap support for O84345 as seed ortholog is 100%.

Group of orthologs #55. Best score 231 bits
Score difference with first non-orthologous sequence - A.capsulata:163 C.trachomatis:231

C0NJH1              	100.00%		O84094              	100.00%
Bootstrap support for C0NJH1 as seed ortholog is 99%.
Bootstrap support for O84094 as seed ortholog is 100%.

Group of orthologs #56. Best score 230 bits
Score difference with first non-orthologous sequence - A.capsulata:169 C.trachomatis:230

C0NSJ0              	100.00%		O84309              	100.00%
Bootstrap support for C0NSJ0 as seed ortholog is 99%.
Bootstrap support for O84309 as seed ortholog is 100%.

Group of orthologs #57. Best score 229 bits
Score difference with first non-orthologous sequence - A.capsulata:188 C.trachomatis:229

C0P081              	100.00%		O84711              	100.00%
Bootstrap support for C0P081 as seed ortholog is 100%.
Bootstrap support for O84711 as seed ortholog is 100%.

Group of orthologs #58. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:223 C.trachomatis:223

C0NZN7              	100.00%		O84698              	100.00%
Bootstrap support for C0NZN7 as seed ortholog is 100%.
Bootstrap support for O84698 as seed ortholog is 100%.

Group of orthologs #59. Best score 219 bits
Score difference with first non-orthologous sequence - A.capsulata:136 C.trachomatis:219

C0NK94              	100.00%		P36431              	100.00%
Bootstrap support for C0NK94 as seed ortholog is 99%.
Bootstrap support for P36431 as seed ortholog is 100%.

Group of orthologs #60. Best score 219 bits
Score difference with first non-orthologous sequence - A.capsulata:219 C.trachomatis:219

C0NXP6              	100.00%		O84562              	100.00%
Bootstrap support for C0NXP6 as seed ortholog is 100%.
Bootstrap support for O84562 as seed ortholog is 100%.

Group of orthologs #61. Best score 217 bits
Score difference with first non-orthologous sequence - A.capsulata:217 C.trachomatis:217

C0NL12              	100.00%		O84423              	100.00%
Bootstrap support for C0NL12 as seed ortholog is 100%.
Bootstrap support for O84423 as seed ortholog is 100%.

Group of orthologs #62. Best score 215 bits
Score difference with first non-orthologous sequence - A.capsulata:215 C.trachomatis:85

C0NIX9              	100.00%		O84026              	100.00%
Bootstrap support for C0NIX9 as seed ortholog is 100%.
Bootstrap support for O84026 as seed ortholog is 98%.

Group of orthologs #63. Best score 213 bits
Score difference with first non-orthologous sequence - A.capsulata:213 C.trachomatis:213

C0NVN2              	100.00%		O84196              	100.00%
Bootstrap support for C0NVN2 as seed ortholog is 100%.
Bootstrap support for O84196 as seed ortholog is 100%.

Group of orthologs #64. Best score 213 bits
Score difference with first non-orthologous sequence - A.capsulata:213 C.trachomatis:213

C0NYL1              	100.00%		P0CE21              	100.00%
Bootstrap support for C0NYL1 as seed ortholog is 100%.
Bootstrap support for P0CE21 as seed ortholog is 100%.

Group of orthologs #65. Best score 209 bits
Score difference with first non-orthologous sequence - A.capsulata:209 C.trachomatis:209

C0NK86              	100.00%		O84360              	100.00%
Bootstrap support for C0NK86 as seed ortholog is 100%.
Bootstrap support for O84360 as seed ortholog is 100%.

Group of orthologs #66. Best score 207 bits
Score difference with first non-orthologous sequence - A.capsulata:207 C.trachomatis:207

C0NQL9              	100.00%		O84638              	100.00%
Bootstrap support for C0NQL9 as seed ortholog is 100%.
Bootstrap support for O84638 as seed ortholog is 100%.

Group of orthologs #67. Best score 204 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.trachomatis:204

C0NE91              	100.00%		O84734              	100.00%
Bootstrap support for C0NE91 as seed ortholog is 99%.
Bootstrap support for O84734 as seed ortholog is 100%.

Group of orthologs #68. Best score 204 bits
Score difference with first non-orthologous sequence - A.capsulata:48 C.trachomatis:204

C0NJR1              	100.00%		O84296              	100.00%
Bootstrap support for C0NJR1 as seed ortholog is 94%.
Bootstrap support for O84296 as seed ortholog is 100%.

Group of orthologs #69. Best score 204 bits
Score difference with first non-orthologous sequence - A.capsulata:156 C.trachomatis:204

C0NZD5              	100.00%		O84297              	100.00%
Bootstrap support for C0NZD5 as seed ortholog is 99%.
Bootstrap support for O84297 as seed ortholog is 100%.

Group of orthologs #70. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:198 C.trachomatis:198

C0NT48              	100.00%		O84812              	100.00%
Bootstrap support for C0NT48 as seed ortholog is 100%.
Bootstrap support for O84812 as seed ortholog is 100%.

Group of orthologs #71. Best score 189 bits
Score difference with first non-orthologous sequence - A.capsulata:189 C.trachomatis:189

C0NXN7              	100.00%		O84859              	100.00%
Bootstrap support for C0NXN7 as seed ortholog is 100%.
Bootstrap support for O84859 as seed ortholog is 100%.

Group of orthologs #72. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 C.trachomatis:185

C0ND66              	100.00%		O84460              	100.00%
C0ND88              	23.95%		
Bootstrap support for C0ND66 as seed ortholog is 100%.
Bootstrap support for O84460 as seed ortholog is 100%.

Group of orthologs #73. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:104 C.trachomatis:185

C0NJK5              	100.00%		O84530              	100.00%
Bootstrap support for C0NJK5 as seed ortholog is 99%.
Bootstrap support for O84530 as seed ortholog is 100%.

Group of orthologs #74. Best score 183 bits
Score difference with first non-orthologous sequence - A.capsulata:183 C.trachomatis:183

C0NA48              	100.00%		O84266              	100.00%
C0NBI9              	17.66%		
C0NV77              	16.67%		
C0NH66              	8.37%		
Bootstrap support for C0NA48 as seed ortholog is 100%.
Bootstrap support for O84266 as seed ortholog is 100%.

Group of orthologs #75. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:58 C.trachomatis:180

C0NY78              	100.00%		O84247              	100.00%
Bootstrap support for C0NY78 as seed ortholog is 96%.
Bootstrap support for O84247 as seed ortholog is 100%.

Group of orthologs #76. Best score 179 bits
Score difference with first non-orthologous sequence - A.capsulata:179 C.trachomatis:179

C0NTR5              	100.00%		O84028              	100.00%
Bootstrap support for C0NTR5 as seed ortholog is 100%.
Bootstrap support for O84028 as seed ortholog is 100%.

Group of orthologs #77. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:35 C.trachomatis:176

C0P0C5              	100.00%		O84676              	100.00%
                    	       		O84722              	10.78%
Bootstrap support for C0P0C5 as seed ortholog is 82%.
Bootstrap support for O84676 as seed ortholog is 100%.

Group of orthologs #78. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:176 C.trachomatis:176

C0NUM5              	100.00%		O84065              	100.00%
Bootstrap support for C0NUM5 as seed ortholog is 100%.
Bootstrap support for O84065 as seed ortholog is 100%.

Group of orthologs #79. Best score 169 bits
Score difference with first non-orthologous sequence - A.capsulata:169 C.trachomatis:32

C0NAK3              	100.00%		O84712              	100.00%
Bootstrap support for C0NAK3 as seed ortholog is 100%.
Bootstrap support for O84712 as seed ortholog is 91%.

Group of orthologs #80. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:168 C.trachomatis:168

C0P0C4              	100.00%		O84874              	100.00%
Bootstrap support for C0P0C4 as seed ortholog is 100%.
Bootstrap support for O84874 as seed ortholog is 100%.

Group of orthologs #81. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:42 C.trachomatis:163

C0NN06              	100.00%		O84732              	100.00%
C0NLB1              	7.41%		
C0NPK1              	5.68%		
Bootstrap support for C0NN06 as seed ortholog is 77%.
Bootstrap support for O84732 as seed ortholog is 100%.

Group of orthologs #82. Best score 154 bits
Score difference with first non-orthologous sequence - A.capsulata:154 C.trachomatis:154

C0NV09              	100.00%		O84007              	100.00%
Bootstrap support for C0NV09 as seed ortholog is 100%.
Bootstrap support for O84007 as seed ortholog is 100%.

Group of orthologs #83. Best score 145 bits
Score difference with first non-orthologous sequence - A.capsulata:145 C.trachomatis:145

C0NEA4              	100.00%		O84368              	100.00%
Bootstrap support for C0NEA4 as seed ortholog is 100%.
Bootstrap support for O84368 as seed ortholog is 100%.

Group of orthologs #84. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 C.trachomatis:144

C0NSM2              	100.00%		O84126              	100.00%
C0NAG1              	7.03%		
Bootstrap support for C0NSM2 as seed ortholog is 100%.
Bootstrap support for O84126 as seed ortholog is 100%.

Group of orthologs #85. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:141 C.trachomatis:141

C0NFK8              	100.00%		O84835              	100.00%
Bootstrap support for C0NFK8 as seed ortholog is 100%.
Bootstrap support for O84835 as seed ortholog is 100%.

Group of orthologs #86. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:52 C.trachomatis:139

C0NI45              	100.00%		O84782              	100.00%
Bootstrap support for C0NI45 as seed ortholog is 89%.
Bootstrap support for O84782 as seed ortholog is 100%.

Group of orthologs #87. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 C.trachomatis:138

C0NZQ5              	100.00%		O84704              	100.00%
Bootstrap support for C0NZQ5 as seed ortholog is 100%.
Bootstrap support for O84704 as seed ortholog is 100%.

Group of orthologs #88. Best score 136 bits
Score difference with first non-orthologous sequence - A.capsulata:136 C.trachomatis:136

C0NB30              	100.00%		O84720              	100.00%
Bootstrap support for C0NB30 as seed ortholog is 100%.
Bootstrap support for O84720 as seed ortholog is 100%.

Group of orthologs #89. Best score 135 bits
Score difference with first non-orthologous sequence - A.capsulata:6 C.trachomatis:85

C0NTC5              	100.00%		P38004              	100.00%
Bootstrap support for C0NTC5 as seed ortholog is 59%.
Alternative seed ortholog is C0NU38 (6 bits away from this cluster)
Bootstrap support for P38004 as seed ortholog is 99%.

Group of orthologs #90. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 C.trachomatis:134

C0NFD3              	100.00%		O84332              	100.00%
Bootstrap support for C0NFD3 as seed ortholog is 100%.
Bootstrap support for O84332 as seed ortholog is 100%.

Group of orthologs #91. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:132 C.trachomatis:132

C0NFL8              	100.00%		O84096              	100.00%
Bootstrap support for C0NFL8 as seed ortholog is 100%.
Bootstrap support for O84096 as seed ortholog is 100%.

Group of orthologs #92. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:11 C.trachomatis:129

C0NBD1              	100.00%		O84843              	100.00%
Bootstrap support for C0NBD1 as seed ortholog is 77%.
Bootstrap support for O84843 as seed ortholog is 100%.

Group of orthologs #93. Best score 125 bits
Score difference with first non-orthologous sequence - A.capsulata:125 C.trachomatis:125

C0NZZ8              	100.00%		O84619              	100.00%
Bootstrap support for C0NZZ8 as seed ortholog is 100%.
Bootstrap support for O84619 as seed ortholog is 100%.

Group of orthologs #94. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:123 C.trachomatis:123

C0NNU5              	100.00%		P55137              	100.00%
Bootstrap support for C0NNU5 as seed ortholog is 100%.
Bootstrap support for P55137 as seed ortholog is 100%.

Group of orthologs #95. Best score 121 bits
Score difference with first non-orthologous sequence - A.capsulata:121 C.trachomatis:121

C0P041              	100.00%		O84589              	100.00%
Bootstrap support for C0P041 as seed ortholog is 100%.
Bootstrap support for O84589 as seed ortholog is 100%.

Group of orthologs #96. Best score 120 bits
Score difference with first non-orthologous sequence - A.capsulata:48 C.trachomatis:120

C0NYE4              	100.00%		O84130              	100.00%
Bootstrap support for C0NYE4 as seed ortholog is 94%.
Bootstrap support for O84130 as seed ortholog is 100%.

Group of orthologs #97. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.trachomatis:116

C0NTN5              	100.00%		O84508              	100.00%
Bootstrap support for C0NTN5 as seed ortholog is 100%.
Bootstrap support for O84508 as seed ortholog is 100%.

Group of orthologs #98. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 C.trachomatis:113

C0NGZ5              	100.00%		O84649              	100.00%
Bootstrap support for C0NGZ5 as seed ortholog is 100%.
Bootstrap support for O84649 as seed ortholog is 100%.

Group of orthologs #99. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:112 C.trachomatis:112

C0NDU7              	100.00%		O84492              	100.00%
Bootstrap support for C0NDU7 as seed ortholog is 100%.
Bootstrap support for O84492 as seed ortholog is 100%.

Group of orthologs #100. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:112 C.trachomatis:112

C0NID5              	100.00%		O84533              	100.00%
Bootstrap support for C0NID5 as seed ortholog is 100%.
Bootstrap support for O84533 as seed ortholog is 100%.

Group of orthologs #101. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 C.trachomatis:109

C0NHI8              	100.00%		O84463              	100.00%
Bootstrap support for C0NHI8 as seed ortholog is 100%.
Bootstrap support for O84463 as seed ortholog is 100%.

Group of orthologs #102. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 C.trachomatis:109

C0NS55              	100.00%		O84578              	100.00%
Bootstrap support for C0NS55 as seed ortholog is 100%.
Bootstrap support for O84578 as seed ortholog is 100%.

Group of orthologs #103. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 C.trachomatis:105

C0NGG8              	100.00%		O84687              	100.00%
Bootstrap support for C0NGG8 as seed ortholog is 100%.
Bootstrap support for O84687 as seed ortholog is 100%.

Group of orthologs #104. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 C.trachomatis:104

C0NEN5              	100.00%		P0CD79              	100.00%
Bootstrap support for C0NEN5 as seed ortholog is 100%.
Bootstrap support for P0CD79 as seed ortholog is 100%.

Group of orthologs #105. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 C.trachomatis:102

C0NYV9              	100.00%		O84234              	100.00%
Bootstrap support for C0NYV9 as seed ortholog is 100%.
Bootstrap support for O84234 as seed ortholog is 100%.

Group of orthologs #106. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:21 C.trachomatis:100

C0NBT9              	100.00%		O84200              	100.00%
Bootstrap support for C0NBT9 as seed ortholog is 64%.
Alternative seed ortholog is C0NZW4 (21 bits away from this cluster)
Bootstrap support for O84200 as seed ortholog is 100%.

Group of orthologs #107. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 C.trachomatis:99

C0NW70              	100.00%		O84478              	100.00%
Bootstrap support for C0NW70 as seed ortholog is 100%.
Bootstrap support for O84478 as seed ortholog is 100%.

Group of orthologs #108. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:30 C.trachomatis:97

C0NWU3              	100.00%		O84781              	100.00%
C0NT67              	19.86%		
C0NXU2              	17.07%		
C0NDM9              	14.27%		
C0P127              	12.25%		
C0NDL6              	11.09%		
C0NIP7              	6.85%		
Bootstrap support for C0NWU3 as seed ortholog is 76%.
Bootstrap support for O84781 as seed ortholog is 100%.

Group of orthologs #109. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 C.trachomatis:96

C0P0U7              	100.00%		O84406              	100.00%
Bootstrap support for C0P0U7 as seed ortholog is 100%.
Bootstrap support for O84406 as seed ortholog is 100%.

Group of orthologs #110. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:95 C.trachomatis:95

C0NPZ3              	100.00%		O84864              	100.00%
Bootstrap support for C0NPZ3 as seed ortholog is 100%.
Bootstrap support for O84864 as seed ortholog is 100%.

Group of orthologs #111. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:95 C.trachomatis:95

C0NTP0              	100.00%		O84320              	100.00%
Bootstrap support for C0NTP0 as seed ortholog is 100%.
Bootstrap support for O84320 as seed ortholog is 100%.

Group of orthologs #112. Best score 93 bits
Score difference with first non-orthologous sequence - A.capsulata:34 C.trachomatis:93

C0NM39              	100.00%		P0CD81              	100.00%
Bootstrap support for C0NM39 as seed ortholog is 93%.
Bootstrap support for P0CD81 as seed ortholog is 100%.

Group of orthologs #113. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 C.trachomatis:92

C0NCI7              	100.00%		O84358              	100.00%
Bootstrap support for C0NCI7 as seed ortholog is 100%.
Bootstrap support for O84358 as seed ortholog is 100%.

Group of orthologs #114. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:36 C.trachomatis:92

C0NV40              	100.00%		O84822              	100.00%
Bootstrap support for C0NV40 as seed ortholog is 79%.
Bootstrap support for O84822 as seed ortholog is 100%.

Group of orthologs #115. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 C.trachomatis:91

C0NIF2              	100.00%		O84241              	100.00%
Bootstrap support for C0NIF2 as seed ortholog is 100%.
Bootstrap support for O84241 as seed ortholog is 100%.

Group of orthologs #116. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 C.trachomatis:91

C0NV37              	100.00%		O84410              	100.00%
Bootstrap support for C0NV37 as seed ortholog is 100%.
Bootstrap support for O84410 as seed ortholog is 100%.

Group of orthologs #117. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:9 C.trachomatis:91

C0NXH6              	100.00%		O84212              	100.00%
Bootstrap support for C0NXH6 as seed ortholog is 60%.
Alternative seed ortholog is C0NUH8 (9 bits away from this cluster)
Bootstrap support for O84212 as seed ortholog is 100%.

Group of orthologs #118. Best score 90 bits
Score difference with first non-orthologous sequence - A.capsulata:90 C.trachomatis:90

C0NFT0              	100.00%		O84321              	100.00%
Bootstrap support for C0NFT0 as seed ortholog is 100%.
Bootstrap support for O84321 as seed ortholog is 100%.

Group of orthologs #119. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 C.trachomatis:89

C0NFT8              	100.00%		O84301              	100.00%
Bootstrap support for C0NFT8 as seed ortholog is 100%.
Bootstrap support for O84301 as seed ortholog is 100%.

Group of orthologs #120. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 C.trachomatis:89

C0NI43              	100.00%		P0CE01              	100.00%
Bootstrap support for C0NI43 as seed ortholog is 100%.
Bootstrap support for P0CE01 as seed ortholog is 100%.

Group of orthologs #121. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:88 C.trachomatis:88

C0NC23              	100.00%		O84294              	100.00%
Bootstrap support for C0NC23 as seed ortholog is 100%.
Bootstrap support for O84294 as seed ortholog is 100%.

Group of orthologs #122. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:88 C.trachomatis:88

C0NQQ6              	100.00%		O84391              	100.00%
Bootstrap support for C0NQQ6 as seed ortholog is 100%.
Bootstrap support for O84391 as seed ortholog is 100%.

Group of orthologs #123. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:88 C.trachomatis:88

C0P132              	100.00%		O84737              	100.00%
Bootstrap support for C0P132 as seed ortholog is 100%.
Bootstrap support for O84737 as seed ortholog is 100%.

Group of orthologs #124. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 C.trachomatis:87

C0NIS9              	100.00%		O84599              	100.00%
Bootstrap support for C0NIS9 as seed ortholog is 100%.
Bootstrap support for O84599 as seed ortholog is 100%.

Group of orthologs #125. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 C.trachomatis:87

C0NMI3              	100.00%		O84608              	100.00%
Bootstrap support for C0NMI3 as seed ortholog is 100%.
Bootstrap support for O84608 as seed ortholog is 100%.

Group of orthologs #126. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 C.trachomatis:87

C0NRV7              	100.00%		O84435              	100.00%
Bootstrap support for C0NRV7 as seed ortholog is 100%.
Bootstrap support for O84435 as seed ortholog is 100%.

Group of orthologs #127. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 C.trachomatis:84

C0NE81              	100.00%		O84367              	100.00%
Bootstrap support for C0NE81 as seed ortholog is 100%.
Bootstrap support for O84367 as seed ortholog is 100%.

Group of orthologs #128. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 C.trachomatis:83

C0NQC7              	100.00%		O84595              	100.00%
Bootstrap support for C0NQC7 as seed ortholog is 100%.
Bootstrap support for O84595 as seed ortholog is 100%.

Group of orthologs #129. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 C.trachomatis:82

C0NI42              	100.00%		O84779              	100.00%
Bootstrap support for C0NI42 as seed ortholog is 100%.
Bootstrap support for O84779 as seed ortholog is 100%.

Group of orthologs #130. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 C.trachomatis:78

C0NEW4              	100.00%		O84353              	100.00%
Bootstrap support for C0NEW4 as seed ortholog is 100%.
Bootstrap support for O84353 as seed ortholog is 100%.

Group of orthologs #131. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 C.trachomatis:74

C0NJ41              	100.00%		O84284              	100.00%
Bootstrap support for C0NJ41 as seed ortholog is 100%.
Bootstrap support for O84284 as seed ortholog is 100%.

Group of orthologs #132. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 C.trachomatis:74

C0NQV4              	100.00%		P0CD84              	100.00%
Bootstrap support for C0NQV4 as seed ortholog is 100%.
Bootstrap support for P0CD84 as seed ortholog is 100%.

Group of orthologs #133. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:72 C.trachomatis:72

C0NFA5              	100.00%		O84658              	100.00%
Bootstrap support for C0NFA5 as seed ortholog is 100%.
Bootstrap support for O84658 as seed ortholog is 100%.

Group of orthologs #134. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:72 C.trachomatis:72

C0NNX5              	100.00%		O84544              	100.00%
Bootstrap support for C0NNX5 as seed ortholog is 100%.
Bootstrap support for O84544 as seed ortholog is 100%.

Group of orthologs #135. Best score 70 bits
Score difference with first non-orthologous sequence - A.capsulata:70 C.trachomatis:70

C0NVX9              	100.00%		P0A4C8              	100.00%
Bootstrap support for C0NVX9 as seed ortholog is 100%.
Bootstrap support for P0A4C8 as seed ortholog is 100%.

Group of orthologs #136. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:20 C.trachomatis:69

C0NJS7              	100.00%		O84395              	100.00%
Bootstrap support for C0NJS7 as seed ortholog is 70%.
Alternative seed ortholog is C0NJX8 (20 bits away from this cluster)
Bootstrap support for O84395 as seed ortholog is 100%.

Group of orthologs #137. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 C.trachomatis:69

C0NVE7              	100.00%		O84127              	100.00%
Bootstrap support for C0NVE7 as seed ortholog is 100%.
Bootstrap support for O84127 as seed ortholog is 100%.

Group of orthologs #138. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 C.trachomatis:68

C0NRR6              	100.00%		O84215              	100.00%
Bootstrap support for C0NRR6 as seed ortholog is 100%.
Bootstrap support for O84215 as seed ortholog is 100%.

Group of orthologs #139. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 C.trachomatis:67

C0NC11              	100.00%		O84189              	100.00%
Bootstrap support for C0NC11 as seed ortholog is 100%.
Bootstrap support for O84189 as seed ortholog is 100%.

Group of orthologs #140. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 C.trachomatis:67

C0NSG1              	100.00%		O84750              	100.00%
Bootstrap support for C0NSG1 as seed ortholog is 100%.
Bootstrap support for O84750 as seed ortholog is 100%.

Group of orthologs #141. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 C.trachomatis:66

C0NG76              	100.00%		O84081              	100.00%
Bootstrap support for C0NG76 as seed ortholog is 100%.
Bootstrap support for O84081 as seed ortholog is 100%.

Group of orthologs #142. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:15 C.trachomatis:64

C0NVE4              	100.00%		P0CE03              	100.00%
Bootstrap support for C0NVE4 as seed ortholog is 68%.
Alternative seed ortholog is C0NJG6 (15 bits away from this cluster)
Bootstrap support for P0CE03 as seed ortholog is 100%.

Group of orthologs #143. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 C.trachomatis:63

C0NCV9              	100.00%		P36424              	100.00%
Bootstrap support for C0NCV9 as seed ortholog is 100%.
Bootstrap support for P36424 as seed ortholog is 100%.

Group of orthologs #144. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:5 C.trachomatis:63

C0NX47              	100.00%		P0CE04              	100.00%
Bootstrap support for C0NX47 as seed ortholog is 56%.
Alternative seed ortholog is C0NAE5 (5 bits away from this cluster)
Bootstrap support for P0CE04 as seed ortholog is 100%.

Group of orthologs #145. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 C.trachomatis:62

C0ND22              	100.00%		P0CD83              	100.00%
Bootstrap support for C0ND22 as seed ortholog is 100%.
Bootstrap support for P0CD83 as seed ortholog is 100%.

Group of orthologs #146. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 C.trachomatis:62

C0NGW1              	100.00%		O84792              	100.00%
Bootstrap support for C0NGW1 as seed ortholog is 100%.
Bootstrap support for O84792 as seed ortholog is 100%.

Group of orthologs #147. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 C.trachomatis:62

C0NN35              	100.00%		O84547              	100.00%
Bootstrap support for C0NN35 as seed ortholog is 100%.
Bootstrap support for O84547 as seed ortholog is 100%.

Group of orthologs #148. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.trachomatis:59

C0NQC2              	100.00%		O84150              	100.00%
C0P189              	7.34%		
C0NU09              	5.50%		
Bootstrap support for C0NQC2 as seed ortholog is 100%.
Bootstrap support for O84150 as seed ortholog is 100%.

Group of orthologs #149. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.trachomatis:59

C0P046              	100.00%		O84381              	100.00%
C0NDH1              	50.68%		
Bootstrap support for C0P046 as seed ortholog is 100%.
Bootstrap support for O84381 as seed ortholog is 100%.

Group of orthologs #150. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.trachomatis:59

C0NH90              	100.00%		O84390              	100.00%
Bootstrap support for C0NH90 as seed ortholog is 100%.
Bootstrap support for O84390 as seed ortholog is 100%.

Group of orthologs #151. Best score 58 bits
Score difference with first non-orthologous sequence - A.capsulata:58 C.trachomatis:58

C0NUD0              	100.00%		O84527              	100.00%
Bootstrap support for C0NUD0 as seed ortholog is 100%.
Bootstrap support for O84527 as seed ortholog is 100%.

Group of orthologs #152. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 C.trachomatis:57

C0NVE6              	100.00%		O84128              	100.00%
Bootstrap support for C0NVE6 as seed ortholog is 100%.
Bootstrap support for O84128 as seed ortholog is 100%.

Group of orthologs #153. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 C.trachomatis:56

C0NK71              	100.00%		O84366              	100.00%
C0NLM4              	21.23%		
C0NMP1              	13.27%		
Bootstrap support for C0NK71 as seed ortholog is 100%.
Bootstrap support for O84366 as seed ortholog is 100%.

Group of orthologs #154. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 C.trachomatis:56

C0NZZ7              	100.00%		O84693              	100.00%
C0NNC6              	14.78%		
Bootstrap support for C0NZZ7 as seed ortholog is 100%.
Bootstrap support for O84693 as seed ortholog is 100%.

Group of orthologs #155. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 C.trachomatis:55

C0NIH9              	100.00%		O84218              	100.00%
C0NRD9              	26.56%		
C0NHZ1              	23.44%		
C0NTX3              	20.98%		
C0NWS6              	17.77%		
C0NPM2              	15.60%		
C0NQH1              	14.84%		
C0NNM3              	6.43%		
Bootstrap support for C0NIH9 as seed ortholog is 100%.
Bootstrap support for O84218 as seed ortholog is 100%.

Group of orthologs #156. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 C.trachomatis:54

C0NE84              	100.00%		O84611              	100.00%
Bootstrap support for C0NE84 as seed ortholog is 100%.
Bootstrap support for O84611 as seed ortholog is 100%.

Group of orthologs #157. Best score 53 bits
Score difference with first non-orthologous sequence - A.capsulata:53 C.trachomatis:53

C0NJ53              	100.00%		O84840              	100.00%
Bootstrap support for C0NJ53 as seed ortholog is 100%.
Bootstrap support for O84840 as seed ortholog is 100%.

Group of orthologs #158. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 C.trachomatis:52

C0NZD2              	100.00%		P0CE02              	100.00%
Bootstrap support for C0NZD2 as seed ortholog is 100%.
Bootstrap support for P0CE02 as seed ortholog is 100%.

Group of orthologs #159. Best score 51 bits
Score difference with first non-orthologous sequence - A.capsulata:51 C.trachomatis:51

C0NQV8              	100.00%		P66370              	100.00%
Bootstrap support for C0NQV8 as seed ortholog is 100%.
Bootstrap support for P66370 as seed ortholog is 100%.

Group of orthologs #160. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 C.trachomatis:50

C0NFV8              	100.00%		P66480              	100.00%
Bootstrap support for C0NFV8 as seed ortholog is 100%.
Bootstrap support for P66480 as seed ortholog is 100%.

Group of orthologs #161. Best score 46 bits
Score difference with first non-orthologous sequence - A.capsulata:46 C.trachomatis:46

C0NAJ6              	100.00%		O84777              	100.00%
Bootstrap support for C0NAJ6 as seed ortholog is 100%.
Bootstrap support for O84777 as seed ortholog is 100%.

Group of orthologs #162. Best score 43 bits
Score difference with first non-orthologous sequence - A.capsulata:43 C.trachomatis:43

C0NH01              	100.00%		O84833              	100.00%
Bootstrap support for C0NH01 as seed ortholog is 100%.
Bootstrap support for O84833 as seed ortholog is 100%.

Group of orthologs #163. Best score 42 bits
Score difference with first non-orthologous sequence - A.capsulata:42 C.trachomatis:42

C0NNH6              	100.00%		O84029              	100.00%
Bootstrap support for C0NNH6 as seed ortholog is 100%.
Bootstrap support for O84029 as seed ortholog is 100%.

Group of orthologs #164. Best score 42 bits
Score difference with first non-orthologous sequence - A.capsulata:42 C.trachomatis:42

C0NTM9              	100.00%		O84191              	100.00%
Bootstrap support for C0NTM9 as seed ortholog is 100%.
Bootstrap support for O84191 as seed ortholog is 100%.