###################################
1686 groups of orthologs
1843 in-paralogs from A.capsulata
2061 in-paralogs from C.reinhardtii
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3492 bits
Score difference with first non-orthologous sequence - A.capsulata:3492 C.reinhardtii:3492

C0NBJ8              	100.00%		A8HPL0              	100.00%
Bootstrap support for C0NBJ8 as seed ortholog is 100%.
Bootstrap support for A8HPL0 as seed ortholog is 100%.

Group of orthologs #2. Best score 2109 bits
Score difference with first non-orthologous sequence - A.capsulata:2109 C.reinhardtii:979

C0NYC5              	100.00%		A8IWA6              	100.00%
Bootstrap support for C0NYC5 as seed ortholog is 100%.
Bootstrap support for A8IWA6 as seed ortholog is 100%.

Group of orthologs #3. Best score 1816 bits
Score difference with first non-orthologous sequence - A.capsulata:652 C.reinhardtii:1816

C0NG17              	100.00%		A8JI25              	100.00%
Bootstrap support for C0NG17 as seed ortholog is 100%.
Bootstrap support for A8JI25 as seed ortholog is 100%.

Group of orthologs #4. Best score 1453 bits
Score difference with first non-orthologous sequence - A.capsulata:1453 C.reinhardtii:1453

C0NAF9              	100.00%		A8I4S9              	100.00%
Bootstrap support for C0NAF9 as seed ortholog is 100%.
Bootstrap support for A8I4S9 as seed ortholog is 100%.

Group of orthologs #5. Best score 1418 bits
Score difference with first non-orthologous sequence - A.capsulata:1418 C.reinhardtii:2

C0NFT4              	100.00%		Q9SMH5              	100.00%
Bootstrap support for C0NFT4 as seed ortholog is 100%.
Bootstrap support for Q9SMH5 as seed ortholog is 49%.
Alternative seed ortholog is A8JHU7 (2 bits away from this cluster)

Group of orthologs #6. Best score 1228 bits
Score difference with first non-orthologous sequence - A.capsulata:1228 C.reinhardtii:1228

C0P0A1              	100.00%		A8IY03              	100.00%
Bootstrap support for C0P0A1 as seed ortholog is 100%.
Bootstrap support for A8IY03 as seed ortholog is 100%.

Group of orthologs #7. Best score 1218 bits
Score difference with first non-orthologous sequence - A.capsulata:1218 C.reinhardtii:1218

C0NGR3              	100.00%		A8IDG4              	100.00%
Bootstrap support for C0NGR3 as seed ortholog is 100%.
Bootstrap support for A8IDG4 as seed ortholog is 100%.

Group of orthologs #8. Best score 1177 bits
Score difference with first non-orthologous sequence - A.capsulata:1177 C.reinhardtii:1177

C0NAX2              	100.00%		A8HRR9              	100.00%
Bootstrap support for C0NAX2 as seed ortholog is 100%.
Bootstrap support for A8HRR9 as seed ortholog is 100%.

Group of orthologs #9. Best score 1143 bits
Score difference with first non-orthologous sequence - A.capsulata:1143 C.reinhardtii:1143

C0NB61              	100.00%		A8I9Z6              	100.00%
Bootstrap support for C0NB61 as seed ortholog is 100%.
Bootstrap support for A8I9Z6 as seed ortholog is 100%.

Group of orthologs #10. Best score 1120 bits
Score difference with first non-orthologous sequence - A.capsulata:397 C.reinhardtii:1120

C0NEY2              	100.00%		A8IRZ2              	100.00%
Bootstrap support for C0NEY2 as seed ortholog is 100%.
Bootstrap support for A8IRZ2 as seed ortholog is 100%.

Group of orthologs #11. Best score 1096 bits
Score difference with first non-orthologous sequence - A.capsulata:1096 C.reinhardtii:1096

C0NIM9              	100.00%		A8JDR3              	100.00%
Bootstrap support for C0NIM9 as seed ortholog is 100%.
Bootstrap support for A8JDR3 as seed ortholog is 100%.

Group of orthologs #12. Best score 1093 bits
Score difference with first non-orthologous sequence - A.capsulata:858 C.reinhardtii:1093

C0NGX6              	100.00%		A8JH01              	100.00%
Bootstrap support for C0NGX6 as seed ortholog is 100%.
Bootstrap support for A8JH01 as seed ortholog is 100%.

Group of orthologs #13. Best score 1051 bits
Score difference with first non-orthologous sequence - A.capsulata:238 C.reinhardtii:932

C0NH60              	100.00%		A8HMQ1              	100.00%
Bootstrap support for C0NH60 as seed ortholog is 100%.
Bootstrap support for A8HMQ1 as seed ortholog is 100%.

Group of orthologs #14. Best score 1046 bits
Score difference with first non-orthologous sequence - A.capsulata:1046 C.reinhardtii:1046

C0NX13              	100.00%		A8JD08              	100.00%
Bootstrap support for C0NX13 as seed ortholog is 100%.
Bootstrap support for A8JD08 as seed ortholog is 100%.

Group of orthologs #15. Best score 1045 bits
Score difference with first non-orthologous sequence - A.capsulata:639 C.reinhardtii:900

C0NSN4              	100.00%		A8JHX9              	100.00%
Bootstrap support for C0NSN4 as seed ortholog is 100%.
Bootstrap support for A8JHX9 as seed ortholog is 100%.

Group of orthologs #16. Best score 1044 bits
Score difference with first non-orthologous sequence - A.capsulata:720 C.reinhardtii:920

C0NNR3              	100.00%		A8JCA8              	100.00%
Bootstrap support for C0NNR3 as seed ortholog is 100%.
Bootstrap support for A8JCA8 as seed ortholog is 100%.

Group of orthologs #17. Best score 1043 bits
Score difference with first non-orthologous sequence - A.capsulata:936 C.reinhardtii:966

C0NL66              	100.00%		A8J9F3              	100.00%
Bootstrap support for C0NL66 as seed ortholog is 100%.
Bootstrap support for A8J9F3 as seed ortholog is 100%.

Group of orthologs #18. Best score 1038 bits
Score difference with first non-orthologous sequence - A.capsulata:1038 C.reinhardtii:1038

C0NZ30              	100.00%		A8IVM9              	100.00%
Bootstrap support for C0NZ30 as seed ortholog is 100%.
Bootstrap support for A8IVM9 as seed ortholog is 100%.

Group of orthologs #19. Best score 1026 bits
Score difference with first non-orthologous sequence - A.capsulata:1026 C.reinhardtii:1026

C0NTC0              	100.00%		A8I8Y6              	100.00%
Bootstrap support for C0NTC0 as seed ortholog is 100%.
Bootstrap support for A8I8Y6 as seed ortholog is 100%.

Group of orthologs #20. Best score 1007 bits
Score difference with first non-orthologous sequence - A.capsulata:1007 C.reinhardtii:754

C0NWD8              	100.00%		A8HPJ0              	100.00%
Bootstrap support for C0NWD8 as seed ortholog is 100%.
Bootstrap support for A8HPJ0 as seed ortholog is 100%.

Group of orthologs #21. Best score 985 bits
Score difference with first non-orthologous sequence - A.capsulata:985 C.reinhardtii:985

C0NYN4              	100.00%		A8INS0              	100.00%
Bootstrap support for C0NYN4 as seed ortholog is 100%.
Bootstrap support for A8INS0 as seed ortholog is 100%.

Group of orthologs #22. Best score 952 bits
Score difference with first non-orthologous sequence - A.capsulata:952 C.reinhardtii:952

C0NJQ4              	100.00%		A8IVG0              	100.00%
Bootstrap support for C0NJQ4 as seed ortholog is 100%.
Bootstrap support for A8IVG0 as seed ortholog is 100%.

Group of orthologs #23. Best score 949 bits
Score difference with first non-orthologous sequence - A.capsulata:949 C.reinhardtii:949

C0NJY1              	100.00%		A8IY70              	100.00%
C0P187              	24.24%		
Bootstrap support for C0NJY1 as seed ortholog is 100%.
Bootstrap support for A8IY70 as seed ortholog is 100%.

Group of orthologs #24. Best score 948 bits
Score difference with first non-orthologous sequence - A.capsulata:948 C.reinhardtii:948

C0NC57              	100.00%		A8IWF9              	100.00%
Bootstrap support for C0NC57 as seed ortholog is 100%.
Bootstrap support for A8IWF9 as seed ortholog is 100%.

Group of orthologs #25. Best score 944 bits
Score difference with first non-orthologous sequence - A.capsulata:944 C.reinhardtii:944

C0NMV4              	100.00%		A8JCP5              	100.00%
Bootstrap support for C0NMV4 as seed ortholog is 100%.
Bootstrap support for A8JCP5 as seed ortholog is 100%.

Group of orthologs #26. Best score 926 bits
Score difference with first non-orthologous sequence - A.capsulata:526 C.reinhardtii:547

C0NN96              	100.00%		A8IK98              	100.00%
Bootstrap support for C0NN96 as seed ortholog is 100%.
Bootstrap support for A8IK98 as seed ortholog is 100%.

Group of orthologs #27. Best score 922 bits
Score difference with first non-orthologous sequence - A.capsulata:271 C.reinhardtii:348

C0NYC6              	100.00%		A8JEU4              	100.00%
Bootstrap support for C0NYC6 as seed ortholog is 100%.
Bootstrap support for A8JEU4 as seed ortholog is 100%.

Group of orthologs #28. Best score 920 bits
Score difference with first non-orthologous sequence - A.capsulata:920 C.reinhardtii:920

C0NDA2              	100.00%		A8IFY3              	100.00%
Bootstrap support for C0NDA2 as seed ortholog is 100%.
Bootstrap support for A8IFY3 as seed ortholog is 100%.

Group of orthologs #29. Best score 916 bits
Score difference with first non-orthologous sequence - A.capsulata:773 C.reinhardtii:596

C0NAG1              	100.00%		A8HXT4              	100.00%
Bootstrap support for C0NAG1 as seed ortholog is 100%.
Bootstrap support for A8HXT4 as seed ortholog is 100%.

Group of orthologs #30. Best score 914 bits
Score difference with first non-orthologous sequence - A.capsulata:914 C.reinhardtii:914

C0NNJ3              	100.00%		A8I9D7              	100.00%
Bootstrap support for C0NNJ3 as seed ortholog is 100%.
Bootstrap support for A8I9D7 as seed ortholog is 100%.

Group of orthologs #31. Best score 913 bits
Score difference with first non-orthologous sequence - A.capsulata:555 C.reinhardtii:545

C0NF61              	100.00%		A8HW56              	100.00%
Bootstrap support for C0NF61 as seed ortholog is 100%.
Bootstrap support for A8HW56 as seed ortholog is 100%.

Group of orthologs #32. Best score 908 bits
Score difference with first non-orthologous sequence - A.capsulata:789 C.reinhardtii:908

C0NXC0              	100.00%		A8JGS8              	100.00%
Bootstrap support for C0NXC0 as seed ortholog is 100%.
Bootstrap support for A8JGS8 as seed ortholog is 100%.

Group of orthologs #33. Best score 889 bits
Score difference with first non-orthologous sequence - A.capsulata:795 C.reinhardtii:612

C0NUQ9              	100.00%		A8HP06              	100.00%
Bootstrap support for C0NUQ9 as seed ortholog is 100%.
Bootstrap support for A8HP06 as seed ortholog is 100%.

Group of orthologs #34. Best score 872 bits
Score difference with first non-orthologous sequence - A.capsulata:872 C.reinhardtii:872

C0NHG0              	100.00%		A8JEV6              	100.00%
Bootstrap support for C0NHG0 as seed ortholog is 100%.
Bootstrap support for A8JEV6 as seed ortholog is 100%.

Group of orthologs #35. Best score 856 bits
Score difference with first non-orthologous sequence - A.capsulata:340 C.reinhardtii:345

C0NIT7              	100.00%		A8JGT9              	100.00%
Bootstrap support for C0NIT7 as seed ortholog is 100%.
Bootstrap support for A8JGT9 as seed ortholog is 100%.

Group of orthologs #36. Best score 854 bits
Score difference with first non-orthologous sequence - A.capsulata:854 C.reinhardtii:854

C0NVC4              	100.00%		A8J7V3              	100.00%
Bootstrap support for C0NVC4 as seed ortholog is 100%.
Bootstrap support for A8J7V3 as seed ortholog is 100%.

Group of orthologs #37. Best score 852 bits
Score difference with first non-orthologous sequence - A.capsulata:852 C.reinhardtii:852

C0NQM3              	100.00%		A8J2W2              	100.00%
Bootstrap support for C0NQM3 as seed ortholog is 100%.
Bootstrap support for A8J2W2 as seed ortholog is 100%.

Group of orthologs #38. Best score 847 bits
Score difference with first non-orthologous sequence - A.capsulata:451 C.reinhardtii:434

C0NAA4              	100.00%		A8I542              	100.00%
Bootstrap support for C0NAA4 as seed ortholog is 100%.
Bootstrap support for A8I542 as seed ortholog is 100%.

Group of orthologs #39. Best score 843 bits
Score difference with first non-orthologous sequence - A.capsulata:732 C.reinhardtii:843

C0NSN0              	100.00%		A8HZ23              	100.00%
Bootstrap support for C0NSN0 as seed ortholog is 100%.
Bootstrap support for A8HZ23 as seed ortholog is 100%.

Group of orthologs #40. Best score 841 bits
Score difference with first non-orthologous sequence - A.capsulata:841 C.reinhardtii:841

C0NRD2              	100.00%		A8IYK1              	100.00%
                    	       		Q2VA40              	8.50%
Bootstrap support for C0NRD2 as seed ortholog is 100%.
Bootstrap support for A8IYK1 as seed ortholog is 100%.

Group of orthologs #41. Best score 838 bits
Score difference with first non-orthologous sequence - A.capsulata:241 C.reinhardtii:281

C0NS16              	100.00%		A8I7S9              	100.00%
                    	       		A8I7T8              	70.52%
Bootstrap support for C0NS16 as seed ortholog is 100%.
Bootstrap support for A8I7S9 as seed ortholog is 100%.

Group of orthologs #42. Best score 812 bits
Score difference with first non-orthologous sequence - A.capsulata:812 C.reinhardtii:812

C0NMK5              	100.00%		A8J6S7              	100.00%
Bootstrap support for C0NMK5 as seed ortholog is 100%.
Bootstrap support for A8J6S7 as seed ortholog is 100%.

Group of orthologs #43. Best score 801 bits
Score difference with first non-orthologous sequence - A.capsulata:89 C.reinhardtii:642

C0NA24              	100.00%		A8ISZ1              	100.00%
Bootstrap support for C0NA24 as seed ortholog is 91%.
Bootstrap support for A8ISZ1 as seed ortholog is 100%.

Group of orthologs #44. Best score 798 bits
Score difference with first non-orthologous sequence - A.capsulata:205 C.reinhardtii:570

C0NE10              	100.00%		A8J6M5              	100.00%
C0NII4              	7.26%		A8J6M4              	76.98%
Bootstrap support for C0NE10 as seed ortholog is 99%.
Bootstrap support for A8J6M5 as seed ortholog is 100%.

Group of orthologs #45. Best score 798 bits
Score difference with first non-orthologous sequence - A.capsulata:657 C.reinhardtii:798

C0NPC9              	100.00%		A8J1C1              	100.00%
Bootstrap support for C0NPC9 as seed ortholog is 100%.
Bootstrap support for A8J1C1 as seed ortholog is 100%.

Group of orthologs #46. Best score 780 bits
Score difference with first non-orthologous sequence - A.capsulata:780 C.reinhardtii:289

C0NKY1              	100.00%		A8JA18              	100.00%
Bootstrap support for C0NKY1 as seed ortholog is 100%.
Bootstrap support for A8JA18 as seed ortholog is 99%.

Group of orthologs #47. Best score 780 bits
Score difference with first non-orthologous sequence - A.capsulata:780 C.reinhardtii:780

C0NKD5              	100.00%		A8JEP9              	100.00%
Bootstrap support for C0NKD5 as seed ortholog is 100%.
Bootstrap support for A8JEP9 as seed ortholog is 100%.

Group of orthologs #48. Best score 777 bits
Score difference with first non-orthologous sequence - A.capsulata:547 C.reinhardtii:618

C0NXJ3              	100.00%		A8I8N8              	100.00%
Bootstrap support for C0NXJ3 as seed ortholog is 100%.
Bootstrap support for A8I8N8 as seed ortholog is 100%.

Group of orthologs #49. Best score 774 bits
Score difference with first non-orthologous sequence - A.capsulata:104 C.reinhardtii:85

C0NDY5              	100.00%		A8IE86              	100.00%
Bootstrap support for C0NDY5 as seed ortholog is 91%.
Bootstrap support for A8IE86 as seed ortholog is 91%.

Group of orthologs #50. Best score 773 bits
Score difference with first non-orthologous sequence - A.capsulata:323 C.reinhardtii:132

C0P013              	100.00%		A8IZU0              	100.00%
Bootstrap support for C0P013 as seed ortholog is 100%.
Bootstrap support for A8IZU0 as seed ortholog is 99%.

Group of orthologs #51. Best score 765 bits
Score difference with first non-orthologous sequence - A.capsulata:390 C.reinhardtii:405

C0NL49              	100.00%		A8J568              	100.00%
Bootstrap support for C0NL49 as seed ortholog is 99%.
Bootstrap support for A8J568 as seed ortholog is 100%.

Group of orthologs #52. Best score 756 bits
Score difference with first non-orthologous sequence - A.capsulata:462 C.reinhardtii:756

C0NZC9              	100.00%		A8JDQ4              	100.00%
Bootstrap support for C0NZC9 as seed ortholog is 100%.
Bootstrap support for A8JDQ4 as seed ortholog is 100%.

Group of orthologs #53. Best score 745 bits
Score difference with first non-orthologous sequence - A.capsulata:377 C.reinhardtii:447

C0NKB3              	100.00%		A8IXZ0              	100.00%
Bootstrap support for C0NKB3 as seed ortholog is 100%.
Bootstrap support for A8IXZ0 as seed ortholog is 100%.

Group of orthologs #54. Best score 735 bits
Score difference with first non-orthologous sequence - A.capsulata:735 C.reinhardtii:735

C0NT97              	100.00%		A8I164              	100.00%
Bootstrap support for C0NT97 as seed ortholog is 100%.
Bootstrap support for A8I164 as seed ortholog is 100%.

Group of orthologs #55. Best score 734 bits
Score difference with first non-orthologous sequence - A.capsulata:582 C.reinhardtii:734

C0NSR5              	100.00%		A8IAC7              	100.00%
Bootstrap support for C0NSR5 as seed ortholog is 100%.
Bootstrap support for A8IAC7 as seed ortholog is 100%.

Group of orthologs #56. Best score 730 bits
Score difference with first non-orthologous sequence - A.capsulata:730 C.reinhardtii:215

C0NKB7              	100.00%		A8I972              	100.00%
Bootstrap support for C0NKB7 as seed ortholog is 100%.
Bootstrap support for A8I972 as seed ortholog is 100%.

Group of orthologs #57. Best score 729 bits
Score difference with first non-orthologous sequence - A.capsulata:603 C.reinhardtii:660

C0NPY7              	100.00%		A8JI26              	100.00%
Bootstrap support for C0NPY7 as seed ortholog is 100%.
Bootstrap support for A8JI26 as seed ortholog is 100%.

Group of orthologs #58. Best score 728 bits
Score difference with first non-orthologous sequence - A.capsulata:125 C.reinhardtii:49

C0NM04              	100.00%		A8IVJ6              	100.00%
                    	       		A8IVJ3              	38.13%
Bootstrap support for C0NM04 as seed ortholog is 96%.
Bootstrap support for A8IVJ6 as seed ortholog is 76%.

Group of orthologs #59. Best score 726 bits
Score difference with first non-orthologous sequence - A.capsulata:726 C.reinhardtii:484

C0NPQ6              	100.00%		A8JCF0              	100.00%
Bootstrap support for C0NPQ6 as seed ortholog is 100%.
Bootstrap support for A8JCF0 as seed ortholog is 100%.

Group of orthologs #60. Best score 725 bits
Score difference with first non-orthologous sequence - A.capsulata:725 C.reinhardtii:725

C0NFU2              	100.00%		A8J3A4              	100.00%
Bootstrap support for C0NFU2 as seed ortholog is 100%.
Bootstrap support for A8J3A4 as seed ortholog is 100%.

Group of orthologs #61. Best score 722 bits
Score difference with first non-orthologous sequence - A.capsulata:128 C.reinhardtii:722

C0NA31              	100.00%		A8IX80              	100.00%
Bootstrap support for C0NA31 as seed ortholog is 99%.
Bootstrap support for A8IX80 as seed ortholog is 100%.

Group of orthologs #62. Best score 721 bits
Score difference with first non-orthologous sequence - A.capsulata:721 C.reinhardtii:721

C0P0C4              	100.00%		A8HW52              	100.00%
                    	       		A8IHX1              	59.55%
Bootstrap support for C0P0C4 as seed ortholog is 100%.
Bootstrap support for A8HW52 as seed ortholog is 100%.

Group of orthologs #63. Best score 717 bits
Score difference with first non-orthologous sequence - A.capsulata:717 C.reinhardtii:717

C0NTN6              	100.00%		A8IRW5              	100.00%
Bootstrap support for C0NTN6 as seed ortholog is 100%.
Bootstrap support for A8IRW5 as seed ortholog is 100%.

Group of orthologs #64. Best score 716 bits
Score difference with first non-orthologous sequence - A.capsulata:716 C.reinhardtii:208

C0NE85              	100.00%		A8J8K0              	100.00%
Bootstrap support for C0NE85 as seed ortholog is 100%.
Bootstrap support for A8J8K0 as seed ortholog is 99%.

Group of orthologs #65. Best score 709 bits
Score difference with first non-orthologous sequence - A.capsulata:709 C.reinhardtii:633

C0NCI8              	100.00%		A8IUL6              	100.00%
Bootstrap support for C0NCI8 as seed ortholog is 100%.
Bootstrap support for A8IUL6 as seed ortholog is 100%.

Group of orthologs #66. Best score 705 bits
Score difference with first non-orthologous sequence - A.capsulata:705 C.reinhardtii:705

C0NAM8              	100.00%		A8IG58              	100.00%
Bootstrap support for C0NAM8 as seed ortholog is 100%.
Bootstrap support for A8IG58 as seed ortholog is 100%.

Group of orthologs #67. Best score 704 bits
Score difference with first non-orthologous sequence - A.capsulata:704 C.reinhardtii:115

C0P0C5              	100.00%		A8IQU3              	100.00%
Bootstrap support for C0P0C5 as seed ortholog is 100%.
Bootstrap support for A8IQU3 as seed ortholog is 99%.

Group of orthologs #68. Best score 703 bits
Score difference with first non-orthologous sequence - A.capsulata:703 C.reinhardtii:703

C0NTE1              	100.00%		A8J3Y6              	100.00%
Bootstrap support for C0NTE1 as seed ortholog is 100%.
Bootstrap support for A8J3Y6 as seed ortholog is 100%.

Group of orthologs #69. Best score 697 bits
Score difference with first non-orthologous sequence - A.capsulata:697 C.reinhardtii:697

C0NHQ2              	100.00%		Q6X898              	100.00%
Bootstrap support for C0NHQ2 as seed ortholog is 100%.
Bootstrap support for Q6X898 as seed ortholog is 100%.

Group of orthologs #70. Best score 696 bits
Score difference with first non-orthologous sequence - A.capsulata:696 C.reinhardtii:696

C0P0E1              	100.00%		A8IVJ7              	100.00%
Bootstrap support for C0P0E1 as seed ortholog is 100%.
Bootstrap support for A8IVJ7 as seed ortholog is 100%.

Group of orthologs #71. Best score 695 bits
Score difference with first non-orthologous sequence - A.capsulata:695 C.reinhardtii:619

C0NI75              	100.00%		A8J7J2              	100.00%
Bootstrap support for C0NI75 as seed ortholog is 100%.
Bootstrap support for A8J7J2 as seed ortholog is 100%.

Group of orthologs #72. Best score 692 bits
Score difference with first non-orthologous sequence - A.capsulata:41 C.reinhardtii:461

C0P074              	100.00%		Q540H1              	100.00%
Bootstrap support for C0P074 as seed ortholog is 90%.
Bootstrap support for Q540H1 as seed ortholog is 100%.

Group of orthologs #73. Best score 688 bits
Score difference with first non-orthologous sequence - A.capsulata:688 C.reinhardtii:402

C0NFY5              	100.00%		A8IH85              	100.00%
Bootstrap support for C0NFY5 as seed ortholog is 100%.
Bootstrap support for A8IH85 as seed ortholog is 100%.

Group of orthologs #74. Best score 683 bits
Score difference with first non-orthologous sequence - A.capsulata:683 C.reinhardtii:683

C0NC44              	100.00%		A8JH39              	100.00%
Bootstrap support for C0NC44 as seed ortholog is 100%.
Bootstrap support for A8JH39 as seed ortholog is 100%.

Group of orthologs #75. Best score 681 bits
Score difference with first non-orthologous sequence - A.capsulata:681 C.reinhardtii:681

C0NW13              	100.00%		A8II42              	100.00%
Bootstrap support for C0NW13 as seed ortholog is 100%.
Bootstrap support for A8II42 as seed ortholog is 100%.

Group of orthologs #76. Best score 680 bits
Score difference with first non-orthologous sequence - A.capsulata:680 C.reinhardtii:680

C0NFR8              	100.00%		A8JHA4              	100.00%
Bootstrap support for C0NFR8 as seed ortholog is 100%.
Bootstrap support for A8JHA4 as seed ortholog is 100%.

Group of orthologs #77. Best score 671 bits
Score difference with first non-orthologous sequence - A.capsulata:238 C.reinhardtii:179

P53455              	100.00%		A8JAV1              	100.00%
Bootstrap support for P53455 as seed ortholog is 100%.
Bootstrap support for A8JAV1 as seed ortholog is 100%.

Group of orthologs #78. Best score 668 bits
Score difference with first non-orthologous sequence - A.capsulata:668 C.reinhardtii:668

C0NJX0              	100.00%		A8ICJ1              	100.00%
Bootstrap support for C0NJX0 as seed ortholog is 100%.
Bootstrap support for A8ICJ1 as seed ortholog is 100%.

Group of orthologs #79. Best score 659 bits
Score difference with first non-orthologous sequence - A.capsulata:659 C.reinhardtii:593

C0NLW6              	100.00%		A8IIP9              	100.00%
Bootstrap support for C0NLW6 as seed ortholog is 100%.
Bootstrap support for A8IIP9 as seed ortholog is 100%.

Group of orthologs #80. Best score 654 bits
Score difference with first non-orthologous sequence - A.capsulata:654 C.reinhardtii:654

C0NGY5              	100.00%		A8IM71              	100.00%
Bootstrap support for C0NGY5 as seed ortholog is 100%.
Bootstrap support for A8IM71 as seed ortholog is 100%.

Group of orthologs #81. Best score 653 bits
Score difference with first non-orthologous sequence - A.capsulata:653 C.reinhardtii:653

C0NAD8              	100.00%		A8I232              	100.00%
Bootstrap support for C0NAD8 as seed ortholog is 100%.
Bootstrap support for A8I232 as seed ortholog is 100%.

Group of orthologs #82. Best score 647 bits
Score difference with first non-orthologous sequence - A.capsulata:507 C.reinhardtii:647

C0NBX7              	100.00%		A8IIS1              	100.00%
Bootstrap support for C0NBX7 as seed ortholog is 100%.
Bootstrap support for A8IIS1 as seed ortholog is 100%.

Group of orthologs #83. Best score 646 bits
Score difference with first non-orthologous sequence - A.capsulata:299 C.reinhardtii:330

C0NKA9              	100.00%		A8IJV9              	100.00%
C0NW33              	25.95%		A8IZL7              	41.72%
                    	       		A8IS11              	35.25%
                    	       		A8J0V2              	29.58%
Bootstrap support for C0NKA9 as seed ortholog is 99%.
Bootstrap support for A8IJV9 as seed ortholog is 100%.

Group of orthologs #84. Best score 646 bits
Score difference with first non-orthologous sequence - A.capsulata:646 C.reinhardtii:561

C0NGE6              	100.00%		A8HQ74              	100.00%
Bootstrap support for C0NGE6 as seed ortholog is 100%.
Bootstrap support for A8HQ74 as seed ortholog is 100%.

Group of orthologs #85. Best score 646 bits
Score difference with first non-orthologous sequence - A.capsulata:646 C.reinhardtii:546

C0NSJ0              	100.00%		A8IA45              	100.00%
Bootstrap support for C0NSJ0 as seed ortholog is 100%.
Bootstrap support for A8IA45 as seed ortholog is 100%.

Group of orthologs #86. Best score 645 bits
Score difference with first non-orthologous sequence - A.capsulata:645 C.reinhardtii:600

C0NJD4              	100.00%		A8HP46              	100.00%
Bootstrap support for C0NJD4 as seed ortholog is 100%.
Bootstrap support for A8HP46 as seed ortholog is 100%.

Group of orthologs #87. Best score 643 bits
Score difference with first non-orthologous sequence - A.capsulata:302 C.reinhardtii:540

C0NJX2              	100.00%		A8JCQ8              	100.00%
                    	       		A8JCV8              	29.50%
                    	       		A8JFR9              	23.62%
Bootstrap support for C0NJX2 as seed ortholog is 100%.
Bootstrap support for A8JCQ8 as seed ortholog is 100%.

Group of orthologs #88. Best score 643 bits
Score difference with first non-orthologous sequence - A.capsulata:563 C.reinhardtii:111

C0NG27              	100.00%		A8IU68              	100.00%
Bootstrap support for C0NG27 as seed ortholog is 100%.
Bootstrap support for A8IU68 as seed ortholog is 96%.

Group of orthologs #89. Best score 642 bits
Score difference with first non-orthologous sequence - A.capsulata:642 C.reinhardtii:642

C0NKM8              	100.00%		A8IVW3              	100.00%
Bootstrap support for C0NKM8 as seed ortholog is 100%.
Bootstrap support for A8IVW3 as seed ortholog is 100%.

Group of orthologs #90. Best score 641 bits
Score difference with first non-orthologous sequence - A.capsulata:641 C.reinhardtii:546

C0NQG6              	100.00%		A8J524              	100.00%
Bootstrap support for C0NQG6 as seed ortholog is 100%.
Bootstrap support for A8J524 as seed ortholog is 100%.

Group of orthologs #91. Best score 635 bits
Score difference with first non-orthologous sequence - A.capsulata:213 C.reinhardtii:269

C0NDN3              	100.00%		A8JC09              	100.00%
Bootstrap support for C0NDN3 as seed ortholog is 100%.
Bootstrap support for A8JC09 as seed ortholog is 100%.

Group of orthologs #92. Best score 634 bits
Score difference with first non-orthologous sequence - A.capsulata:634 C.reinhardtii:171

C0NKL8              	100.00%		A8J0R6              	100.00%
Bootstrap support for C0NKL8 as seed ortholog is 100%.
Bootstrap support for A8J0R6 as seed ortholog is 99%.

Group of orthologs #93. Best score 633 bits
Score difference with first non-orthologous sequence - A.capsulata:345 C.reinhardtii:458

C0NUR0              	100.00%		A8IV67              	100.00%
Bootstrap support for C0NUR0 as seed ortholog is 100%.
Bootstrap support for A8IV67 as seed ortholog is 100%.

Group of orthologs #94. Best score 631 bits
Score difference with first non-orthologous sequence - A.capsulata:365 C.reinhardtii:371

C0NIX7              	100.00%		A8IT25              	100.00%
Bootstrap support for C0NIX7 as seed ortholog is 100%.
Bootstrap support for A8IT25 as seed ortholog is 100%.

Group of orthologs #95. Best score 631 bits
Score difference with first non-orthologous sequence - A.capsulata:631 C.reinhardtii:631

C0P131              	100.00%		A8IZE7              	100.00%
Bootstrap support for C0P131 as seed ortholog is 100%.
Bootstrap support for A8IZE7 as seed ortholog is 100%.

Group of orthologs #96. Best score 630 bits
Score difference with first non-orthologous sequence - A.capsulata:630 C.reinhardtii:630

C0NI99              	100.00%		A8J0N7              	100.00%
Bootstrap support for C0NI99 as seed ortholog is 100%.
Bootstrap support for A8J0N7 as seed ortholog is 100%.

Group of orthologs #97. Best score 625 bits
Score difference with first non-orthologous sequence - A.capsulata:625 C.reinhardtii:625

C0NJZ2              	100.00%		A8J4W8              	100.00%
Bootstrap support for C0NJZ2 as seed ortholog is 100%.
Bootstrap support for A8J4W8 as seed ortholog is 100%.

Group of orthologs #98. Best score 624 bits
Score difference with first non-orthologous sequence - A.capsulata:624 C.reinhardtii:624

C0NI02              	100.00%		A8IAN1              	100.00%
Bootstrap support for C0NI02 as seed ortholog is 100%.
Bootstrap support for A8IAN1 as seed ortholog is 100%.

Group of orthologs #99. Best score 623 bits
Score difference with first non-orthologous sequence - A.capsulata:623 C.reinhardtii:623

C0NGQ9              	100.00%		A8J014              	100.00%
Bootstrap support for C0NGQ9 as seed ortholog is 100%.
Bootstrap support for A8J014 as seed ortholog is 100%.

Group of orthologs #100. Best score 621 bits
Score difference with first non-orthologous sequence - A.capsulata:621 C.reinhardtii:621

C0NDH4              	100.00%		A8J189              	100.00%
Bootstrap support for C0NDH4 as seed ortholog is 100%.
Bootstrap support for A8J189 as seed ortholog is 100%.

Group of orthologs #101. Best score 621 bits
Score difference with first non-orthologous sequence - A.capsulata:408 C.reinhardtii:621

C0NJE7              	100.00%		A8J3N3              	100.00%
Bootstrap support for C0NJE7 as seed ortholog is 99%.
Bootstrap support for A8J3N3 as seed ortholog is 100%.

Group of orthologs #102. Best score 621 bits
Score difference with first non-orthologous sequence - A.capsulata:349 C.reinhardtii:352

C0NI62              	100.00%		A8J7C8              	100.00%
Bootstrap support for C0NI62 as seed ortholog is 100%.
Bootstrap support for A8J7C8 as seed ortholog is 100%.

Group of orthologs #103. Best score 618 bits
Score difference with first non-orthologous sequence - A.capsulata:618 C.reinhardtii:618

C0NLK4              	100.00%		A8IDE6              	100.00%
Bootstrap support for C0NLK4 as seed ortholog is 100%.
Bootstrap support for A8IDE6 as seed ortholog is 100%.

Group of orthologs #104. Best score 612 bits
Score difference with first non-orthologous sequence - A.capsulata:612 C.reinhardtii:381

C0NWU5              	100.00%		A8I0G3              	100.00%
Bootstrap support for C0NWU5 as seed ortholog is 100%.
Bootstrap support for A8I0G3 as seed ortholog is 100%.

Group of orthologs #105. Best score 610 bits
Score difference with first non-orthologous sequence - A.capsulata:610 C.reinhardtii:610

C0P057              	100.00%		A8II71              	100.00%
Bootstrap support for C0P057 as seed ortholog is 100%.
Bootstrap support for A8II71 as seed ortholog is 100%.

Group of orthologs #106. Best score 609 bits
Score difference with first non-orthologous sequence - A.capsulata:609 C.reinhardtii:609

C0NE67              	100.00%		A8IED9              	100.00%
Bootstrap support for C0NE67 as seed ortholog is 100%.
Bootstrap support for A8IED9 as seed ortholog is 100%.

Group of orthologs #107. Best score 609 bits
Score difference with first non-orthologous sequence - A.capsulata:369 C.reinhardtii:165

C0NXA8              	100.00%		A8HQA8              	100.00%
Bootstrap support for C0NXA8 as seed ortholog is 100%.
Bootstrap support for A8HQA8 as seed ortholog is 99%.

Group of orthologs #108. Best score 608 bits
Score difference with first non-orthologous sequence - A.capsulata:608 C.reinhardtii:366

C0NP36              	100.00%		A8IDL8              	100.00%
Bootstrap support for C0NP36 as seed ortholog is 100%.
Bootstrap support for A8IDL8 as seed ortholog is 100%.

Group of orthologs #109. Best score 605 bits
Score difference with first non-orthologous sequence - A.capsulata:334 C.reinhardtii:605

C0NXA1              	100.00%		A8HW07              	100.00%
Bootstrap support for C0NXA1 as seed ortholog is 100%.
Bootstrap support for A8HW07 as seed ortholog is 100%.

Group of orthologs #110. Best score 604 bits
Score difference with first non-orthologous sequence - A.capsulata:604 C.reinhardtii:604

C0NE71              	100.00%		Q8VZZ5              	100.00%
Bootstrap support for C0NE71 as seed ortholog is 100%.
Bootstrap support for Q8VZZ5 as seed ortholog is 100%.

Group of orthologs #111. Best score 603 bits
Score difference with first non-orthologous sequence - A.capsulata:603 C.reinhardtii:536

C0NUR1              	100.00%		A8JE04              	100.00%
Bootstrap support for C0NUR1 as seed ortholog is 100%.
Bootstrap support for A8JE04 as seed ortholog is 100%.

Group of orthologs #112. Best score 600 bits
Score difference with first non-orthologous sequence - A.capsulata:469 C.reinhardtii:600

C0P0H4              	100.00%		A8JH46              	100.00%
Bootstrap support for C0P0H4 as seed ortholog is 100%.
Bootstrap support for A8JH46 as seed ortholog is 100%.

Group of orthologs #113. Best score 597 bits
Score difference with first non-orthologous sequence - A.capsulata:100 C.reinhardtii:85

C0NT99              	100.00%		A8JBN7              	100.00%
Bootstrap support for C0NT99 as seed ortholog is 99%.
Bootstrap support for A8JBN7 as seed ortholog is 99%.

Group of orthologs #114. Best score 594 bits
Score difference with first non-orthologous sequence - A.capsulata:594 C.reinhardtii:171

C0NGZ7              	100.00%		A8HPT4              	100.00%
Bootstrap support for C0NGZ7 as seed ortholog is 100%.
Bootstrap support for A8HPT4 as seed ortholog is 99%.

Group of orthologs #115. Best score 592 bits
Score difference with first non-orthologous sequence - A.capsulata:16 C.reinhardtii:54

C0NMB4              	100.00%		Q8W4V3              	100.00%
Bootstrap support for C0NMB4 as seed ortholog is 63%.
Alternative seed ortholog is C0NGS5 (16 bits away from this cluster)
Bootstrap support for Q8W4V3 as seed ortholog is 90%.

Group of orthologs #116. Best score 591 bits
Score difference with first non-orthologous sequence - A.capsulata:591 C.reinhardtii:129

C0NBN9              	100.00%		A8JGB2              	100.00%
C0NP73              	11.30%		
Bootstrap support for C0NBN9 as seed ortholog is 100%.
Bootstrap support for A8JGB2 as seed ortholog is 98%.

Group of orthologs #117. Best score 591 bits
Score difference with first non-orthologous sequence - A.capsulata:292 C.reinhardtii:416

C0NAB1              	100.00%		A8IR41              	100.00%
Bootstrap support for C0NAB1 as seed ortholog is 100%.
Bootstrap support for A8IR41 as seed ortholog is 100%.

Group of orthologs #118. Best score 591 bits
Score difference with first non-orthologous sequence - A.capsulata:591 C.reinhardtii:591

C0NL89              	100.00%		A8I175              	100.00%
Bootstrap support for C0NL89 as seed ortholog is 100%.
Bootstrap support for A8I175 as seed ortholog is 100%.

Group of orthologs #119. Best score 589 bits
Score difference with first non-orthologous sequence - A.capsulata:214 C.reinhardtii:402

C0NDN0              	100.00%		A8IHB3              	100.00%
Bootstrap support for C0NDN0 as seed ortholog is 100%.
Bootstrap support for A8IHB3 as seed ortholog is 100%.

Group of orthologs #120. Best score 584 bits
Score difference with first non-orthologous sequence - A.capsulata:584 C.reinhardtii:584

C0NE03              	100.00%		A8IEL6              	100.00%
Bootstrap support for C0NE03 as seed ortholog is 100%.
Bootstrap support for A8IEL6 as seed ortholog is 100%.

Group of orthologs #121. Best score 584 bits
Score difference with first non-orthologous sequence - A.capsulata:584 C.reinhardtii:98

C0P0B3              	100.00%		A8IMK1              	100.00%
Bootstrap support for C0P0B3 as seed ortholog is 100%.
Bootstrap support for A8IMK1 as seed ortholog is 99%.

Group of orthologs #122. Best score 579 bits
Score difference with first non-orthologous sequence - A.capsulata:579 C.reinhardtii:579

C0NSE6              	100.00%		A8I793              	100.00%
Bootstrap support for C0NSE6 as seed ortholog is 100%.
Bootstrap support for A8I793 as seed ortholog is 100%.

Group of orthologs #123. Best score 578 bits
Score difference with first non-orthologous sequence - A.capsulata:423 C.reinhardtii:447

C0ND64              	100.00%		A8HZ26              	100.00%
Bootstrap support for C0ND64 as seed ortholog is 100%.
Bootstrap support for A8HZ26 as seed ortholog is 100%.

Group of orthologs #124. Best score 578 bits
Score difference with first non-orthologous sequence - A.capsulata:284 C.reinhardtii:432

C0NV44              	100.00%		A8IIP7              	100.00%
Bootstrap support for C0NV44 as seed ortholog is 100%.
Bootstrap support for A8IIP7 as seed ortholog is 100%.

Group of orthologs #125. Best score 574 bits
Score difference with first non-orthologous sequence - A.capsulata:574 C.reinhardtii:574

C0NC04              	100.00%		A8HXM5              	100.00%
Bootstrap support for C0NC04 as seed ortholog is 100%.
Bootstrap support for A8HXM5 as seed ortholog is 100%.

Group of orthologs #126. Best score 574 bits
Score difference with first non-orthologous sequence - A.capsulata:448 C.reinhardtii:574

C0NVX4              	100.00%		A8JAG5              	100.00%
Bootstrap support for C0NVX4 as seed ortholog is 100%.
Bootstrap support for A8JAG5 as seed ortholog is 100%.

Group of orthologs #127. Best score 573 bits
Score difference with first non-orthologous sequence - A.capsulata:19 C.reinhardtii:80

C0NMC7              	100.00%		A8IHD9              	100.00%
Bootstrap support for C0NMC7 as seed ortholog is 68%.
Alternative seed ortholog is C0NQT9 (19 bits away from this cluster)
Bootstrap support for A8IHD9 as seed ortholog is 92%.

Group of orthologs #128. Best score 573 bits
Score difference with first non-orthologous sequence - A.capsulata:407 C.reinhardtii:573

C0NIQ0              	100.00%		A8JG07              	100.00%
Bootstrap support for C0NIQ0 as seed ortholog is 100%.
Bootstrap support for A8JG07 as seed ortholog is 100%.

Group of orthologs #129. Best score 569 bits
Score difference with first non-orthologous sequence - A.capsulata:569 C.reinhardtii:569

C0NE28              	100.00%		A8JG58              	100.00%
Bootstrap support for C0NE28 as seed ortholog is 100%.
Bootstrap support for A8JG58 as seed ortholog is 100%.

Group of orthologs #130. Best score 568 bits
Score difference with first non-orthologous sequence - A.capsulata:568 C.reinhardtii:568

C0NLA6              	100.00%		A2PZC1              	100.00%
                    	       		A8J4Y6              	93.46%
Bootstrap support for C0NLA6 as seed ortholog is 100%.
Bootstrap support for A2PZC1 as seed ortholog is 100%.

Group of orthologs #131. Best score 567 bits
Score difference with first non-orthologous sequence - A.capsulata:567 C.reinhardtii:567

C0NHY4              	100.00%		A8IGM5              	100.00%
Bootstrap support for C0NHY4 as seed ortholog is 100%.
Bootstrap support for A8IGM5 as seed ortholog is 100%.

Group of orthologs #132. Best score 566 bits
Score difference with first non-orthologous sequence - A.capsulata:566 C.reinhardtii:332

C0NTA9              	100.00%		A8HPZ4              	100.00%
Bootstrap support for C0NTA9 as seed ortholog is 100%.
Bootstrap support for A8HPZ4 as seed ortholog is 100%.

Group of orthologs #133. Best score 566 bits
Score difference with first non-orthologous sequence - A.capsulata:566 C.reinhardtii:566

C0NBP9              	100.00%		Q6V9A8              	100.00%
Bootstrap support for C0NBP9 as seed ortholog is 100%.
Bootstrap support for Q6V9A8 as seed ortholog is 100%.

Group of orthologs #134. Best score 563 bits
Score difference with first non-orthologous sequence - A.capsulata:563 C.reinhardtii:563

C0NJV7              	100.00%		A8J1K0              	100.00%
                    	       		A8J9X3              	48.89%
                    	       		A8IST3              	35.15%
Bootstrap support for C0NJV7 as seed ortholog is 100%.
Bootstrap support for A8J1K0 as seed ortholog is 100%.

Group of orthologs #135. Best score 563 bits
Score difference with first non-orthologous sequence - A.capsulata:354 C.reinhardtii:563

C0NKS5              	100.00%		A8JF35              	100.00%
Bootstrap support for C0NKS5 as seed ortholog is 100%.
Bootstrap support for A8JF35 as seed ortholog is 100%.

Group of orthologs #136. Best score 562 bits
Score difference with first non-orthologous sequence - A.capsulata:562 C.reinhardtii:562

C0NV80              	100.00%		A8IUN1              	100.00%
Bootstrap support for C0NV80 as seed ortholog is 100%.
Bootstrap support for A8IUN1 as seed ortholog is 100%.

Group of orthologs #137. Best score 562 bits
Score difference with first non-orthologous sequence - A.capsulata:350 C.reinhardtii:379

C0NN27              	100.00%		A8J3L9              	100.00%
Bootstrap support for C0NN27 as seed ortholog is 100%.
Bootstrap support for A8J3L9 as seed ortholog is 100%.

Group of orthologs #138. Best score 561 bits
Score difference with first non-orthologous sequence - A.capsulata:561 C.reinhardtii:319

C0NSR0              	100.00%		A8IPH5              	100.00%
Bootstrap support for C0NSR0 as seed ortholog is 100%.
Bootstrap support for A8IPH5 as seed ortholog is 100%.

Group of orthologs #139. Best score 560 bits
Score difference with first non-orthologous sequence - A.capsulata:163 C.reinhardtii:560

C0NJB6              	100.00%		A8IDJ7              	100.00%
Bootstrap support for C0NJB6 as seed ortholog is 96%.
Bootstrap support for A8IDJ7 as seed ortholog is 100%.

Group of orthologs #140. Best score 559 bits
Score difference with first non-orthologous sequence - A.capsulata:559 C.reinhardtii:559

C0NST7              	100.00%		A8HYL9              	100.00%
Bootstrap support for C0NST7 as seed ortholog is 100%.
Bootstrap support for A8HYL9 as seed ortholog is 100%.

Group of orthologs #141. Best score 559 bits
Score difference with first non-orthologous sequence - A.capsulata:559 C.reinhardtii:559

C0NQ11              	100.00%		A8J0X7              	100.00%
Bootstrap support for C0NQ11 as seed ortholog is 100%.
Bootstrap support for A8J0X7 as seed ortholog is 100%.

Group of orthologs #142. Best score 559 bits
Score difference with first non-orthologous sequence - A.capsulata:180 C.reinhardtii:559

C0NLY7              	100.00%		A8JH25              	100.00%
Bootstrap support for C0NLY7 as seed ortholog is 99%.
Bootstrap support for A8JH25 as seed ortholog is 100%.

Group of orthologs #143. Best score 559 bits
Score difference with first non-orthologous sequence - A.capsulata:559 C.reinhardtii:559

C0NUW5              	100.00%		A8J8Z1              	100.00%
Bootstrap support for C0NUW5 as seed ortholog is 100%.
Bootstrap support for A8J8Z1 as seed ortholog is 100%.

Group of orthologs #144. Best score 558 bits
Score difference with first non-orthologous sequence - A.capsulata:558 C.reinhardtii:558

C0NNF3              	100.00%		A8I0Z4              	100.00%
Bootstrap support for C0NNF3 as seed ortholog is 100%.
Bootstrap support for A8I0Z4 as seed ortholog is 100%.

Group of orthologs #145. Best score 558 bits
Score difference with first non-orthologous sequence - A.capsulata:558 C.reinhardtii:558

C0NXA3              	100.00%		A8JHM2              	100.00%
Bootstrap support for C0NXA3 as seed ortholog is 100%.
Bootstrap support for A8JHM2 as seed ortholog is 100%.

Group of orthologs #146. Best score 551 bits
Score difference with first non-orthologous sequence - A.capsulata:551 C.reinhardtii:551

C0NDC6              	100.00%		A8ID84              	100.00%
Bootstrap support for C0NDC6 as seed ortholog is 100%.
Bootstrap support for A8ID84 as seed ortholog is 100%.

Group of orthologs #147. Best score 551 bits
Score difference with first non-orthologous sequence - A.capsulata:551 C.reinhardtii:401

C0NWI6              	100.00%		A8J9Q1              	100.00%
Bootstrap support for C0NWI6 as seed ortholog is 100%.
Bootstrap support for A8J9Q1 as seed ortholog is 100%.

Group of orthologs #148. Best score 550 bits
Score difference with first non-orthologous sequence - A.capsulata:229 C.reinhardtii:199

C0NAF4              	100.00%		A8IBY2              	100.00%
Bootstrap support for C0NAF4 as seed ortholog is 99%.
Bootstrap support for A8IBY2 as seed ortholog is 99%.

Group of orthologs #149. Best score 548 bits
Score difference with first non-orthologous sequence - A.capsulata:548 C.reinhardtii:548

C0NTH1              	100.00%		A8HYC0              	100.00%
Bootstrap support for C0NTH1 as seed ortholog is 100%.
Bootstrap support for A8HYC0 as seed ortholog is 100%.

Group of orthologs #150. Best score 547 bits
Score difference with first non-orthologous sequence - A.capsulata:251 C.reinhardtii:423

C0NH66              	100.00%		A8J6S4              	100.00%
Bootstrap support for C0NH66 as seed ortholog is 100%.
Bootstrap support for A8J6S4 as seed ortholog is 100%.

Group of orthologs #151. Best score 545 bits
Score difference with first non-orthologous sequence - A.capsulata:221 C.reinhardtii:192

C0NQT6              	100.00%		A8J040              	100.00%
Bootstrap support for C0NQT6 as seed ortholog is 99%.
Bootstrap support for A8J040 as seed ortholog is 99%.

Group of orthologs #152. Best score 545 bits
Score difference with first non-orthologous sequence - A.capsulata:545 C.reinhardtii:545

C0NAB0              	100.00%		A8JH98              	100.00%
Bootstrap support for C0NAB0 as seed ortholog is 100%.
Bootstrap support for A8JH98 as seed ortholog is 100%.

Group of orthologs #153. Best score 542 bits
Score difference with first non-orthologous sequence - A.capsulata:542 C.reinhardtii:501

C0NV68              	100.00%		A8I9M8              	100.00%
Bootstrap support for C0NV68 as seed ortholog is 100%.
Bootstrap support for A8I9M8 as seed ortholog is 100%.

Group of orthologs #154. Best score 542 bits
Score difference with first non-orthologous sequence - A.capsulata:542 C.reinhardtii:542

C0NAW4              	100.00%		A8J9S7              	100.00%
Bootstrap support for C0NAW4 as seed ortholog is 100%.
Bootstrap support for A8J9S7 as seed ortholog is 100%.

Group of orthologs #155. Best score 542 bits
Score difference with first non-orthologous sequence - A.capsulata:421 C.reinhardtii:193

C0NZL9              	100.00%		A8IE89              	100.00%
Bootstrap support for C0NZL9 as seed ortholog is 100%.
Bootstrap support for A8IE89 as seed ortholog is 99%.

Group of orthologs #156. Best score 542 bits
Score difference with first non-orthologous sequence - A.capsulata:542 C.reinhardtii:542

C0P1C1              	100.00%		A8JHE3              	100.00%
Bootstrap support for C0P1C1 as seed ortholog is 100%.
Bootstrap support for A8JHE3 as seed ortholog is 100%.

Group of orthologs #157. Best score 540 bits
Score difference with first non-orthologous sequence - A.capsulata:540 C.reinhardtii:439

C0NJB5              	100.00%		A8J4L1              	100.00%
Bootstrap support for C0NJB5 as seed ortholog is 100%.
Bootstrap support for A8J4L1 as seed ortholog is 100%.

Group of orthologs #158. Best score 538 bits
Score difference with first non-orthologous sequence - A.capsulata:234 C.reinhardtii:27

C0NN06              	100.00%		A8J829              	100.00%
Bootstrap support for C0NN06 as seed ortholog is 99%.
Bootstrap support for A8J829 as seed ortholog is 53%.
Alternative seed ortholog is A8JBB5 (27 bits away from this cluster)

Group of orthologs #159. Best score 537 bits
Score difference with first non-orthologous sequence - A.capsulata:243 C.reinhardtii:329

C0NN82              	100.00%		A8I675              	100.00%
Bootstrap support for C0NN82 as seed ortholog is 100%.
Bootstrap support for A8I675 as seed ortholog is 100%.

Group of orthologs #160. Best score 537 bits
Score difference with first non-orthologous sequence - A.capsulata:537 C.reinhardtii:537

C0NRR2              	100.00%		A8I8X8              	100.00%
Bootstrap support for C0NRR2 as seed ortholog is 100%.
Bootstrap support for A8I8X8 as seed ortholog is 100%.

Group of orthologs #161. Best score 537 bits
Score difference with first non-orthologous sequence - A.capsulata:203 C.reinhardtii:365

C0NUK7              	100.00%		A8IA39              	100.00%
Bootstrap support for C0NUK7 as seed ortholog is 99%.
Bootstrap support for A8IA39 as seed ortholog is 100%.

Group of orthologs #162. Best score 537 bits
Score difference with first non-orthologous sequence - A.capsulata:277 C.reinhardtii:271

C0NCA6              	100.00%		Q9XGU3              	100.00%
Bootstrap support for C0NCA6 as seed ortholog is 100%.
Bootstrap support for Q9XGU3 as seed ortholog is 100%.

Group of orthologs #163. Best score 535 bits
Score difference with first non-orthologous sequence - A.capsulata:535 C.reinhardtii:290

C0NCM7              	100.00%		A8I6G3              	100.00%
Bootstrap support for C0NCM7 as seed ortholog is 100%.
Bootstrap support for A8I6G3 as seed ortholog is 100%.

Group of orthologs #164. Best score 532 bits
Score difference with first non-orthologous sequence - A.capsulata:298 C.reinhardtii:252

C0NNC3              	100.00%		A8IWA5              	100.00%
Bootstrap support for C0NNC3 as seed ortholog is 100%.
Bootstrap support for A8IWA5 as seed ortholog is 100%.

Group of orthologs #165. Best score 532 bits
Score difference with first non-orthologous sequence - A.capsulata:532 C.reinhardtii:376

C0NG75              	100.00%		P26526              	100.00%
Bootstrap support for C0NG75 as seed ortholog is 100%.
Bootstrap support for P26526 as seed ortholog is 100%.

Group of orthologs #166. Best score 528 bits
Score difference with first non-orthologous sequence - A.capsulata:528 C.reinhardtii:217

C0NT96              	100.00%		A8J6K6              	100.00%
C0NKN2              	6.35%		
Bootstrap support for C0NT96 as seed ortholog is 100%.
Bootstrap support for A8J6K6 as seed ortholog is 99%.

Group of orthologs #167. Best score 528 bits
Score difference with first non-orthologous sequence - A.capsulata:528 C.reinhardtii:528

C0NRH1              	100.00%		A8HPT8              	100.00%
Bootstrap support for C0NRH1 as seed ortholog is 100%.
Bootstrap support for A8HPT8 as seed ortholog is 100%.

Group of orthologs #168. Best score 527 bits
Score difference with first non-orthologous sequence - A.capsulata:527 C.reinhardtii:416

C0NQQ8              	100.00%		A8I8V5              	100.00%
C0P0P7              	26.62%		
Bootstrap support for C0NQQ8 as seed ortholog is 100%.
Bootstrap support for A8I8V5 as seed ortholog is 100%.

Group of orthologs #169. Best score 527 bits
Score difference with first non-orthologous sequence - A.capsulata:527 C.reinhardtii:527

C0NFV4              	100.00%		A8JIR0              	100.00%
Bootstrap support for C0NFV4 as seed ortholog is 100%.
Bootstrap support for A8JIR0 as seed ortholog is 100%.

Group of orthologs #170. Best score 525 bits
Score difference with first non-orthologous sequence - A.capsulata:71 C.reinhardtii:525

C0NLJ4              	100.00%		A8J4P9              	100.00%
Bootstrap support for C0NLJ4 as seed ortholog is 88%.
Bootstrap support for A8J4P9 as seed ortholog is 100%.

Group of orthologs #171. Best score 525 bits
Score difference with first non-orthologous sequence - A.capsulata:525 C.reinhardtii:525

C0NIW4              	100.00%		A8JH37              	100.00%
Bootstrap support for C0NIW4 as seed ortholog is 100%.
Bootstrap support for A8JH37 as seed ortholog is 100%.

Group of orthologs #172. Best score 524 bits
Score difference with first non-orthologous sequence - A.capsulata:396 C.reinhardtii:524

C0NTW1              	100.00%		A8HP93              	100.00%
Bootstrap support for C0NTW1 as seed ortholog is 100%.
Bootstrap support for A8HP93 as seed ortholog is 100%.

Group of orthologs #173. Best score 522 bits
Score difference with first non-orthologous sequence - A.capsulata:522 C.reinhardtii:522

C0NTU7              	100.00%		A8HXA2              	100.00%
Bootstrap support for C0NTU7 as seed ortholog is 100%.
Bootstrap support for A8HXA2 as seed ortholog is 100%.

Group of orthologs #174. Best score 521 bits
Score difference with first non-orthologous sequence - A.capsulata:102 C.reinhardtii:420

C0P090              	100.00%		A8JHC9              	100.00%
Bootstrap support for C0P090 as seed ortholog is 99%.
Bootstrap support for A8JHC9 as seed ortholog is 100%.

Group of orthologs #175. Best score 517 bits
Score difference with first non-orthologous sequence - A.capsulata:347 C.reinhardtii:161

C0P0H6              	100.00%		A8J979              	100.00%
Bootstrap support for C0P0H6 as seed ortholog is 100%.
Bootstrap support for A8J979 as seed ortholog is 99%.

Group of orthologs #176. Best score 514 bits
Score difference with first non-orthologous sequence - A.capsulata:514 C.reinhardtii:459

C0NUD2              	100.00%		A8J709              	100.00%
Bootstrap support for C0NUD2 as seed ortholog is 100%.
Bootstrap support for A8J709 as seed ortholog is 100%.

Group of orthologs #177. Best score 512 bits
Score difference with first non-orthologous sequence - A.capsulata:512 C.reinhardtii:512

C0NAW3              	100.00%		A8HRS5              	100.00%
Bootstrap support for C0NAW3 as seed ortholog is 100%.
Bootstrap support for A8HRS5 as seed ortholog is 100%.

Group of orthologs #178. Best score 510 bits
Score difference with first non-orthologous sequence - A.capsulata:159 C.reinhardtii:425

C0NGX8              	100.00%		A8IYG8              	100.00%
Bootstrap support for C0NGX8 as seed ortholog is 100%.
Bootstrap support for A8IYG8 as seed ortholog is 100%.

Group of orthologs #179. Best score 510 bits
Score difference with first non-orthologous sequence - A.capsulata:510 C.reinhardtii:288

C0NZD6              	100.00%		A8J1T4              	100.00%
Bootstrap support for C0NZD6 as seed ortholog is 100%.
Bootstrap support for A8J1T4 as seed ortholog is 100%.

Group of orthologs #180. Best score 508 bits
Score difference with first non-orthologous sequence - A.capsulata:508 C.reinhardtii:103

C0NJR6              	100.00%		A8HS40              	100.00%
Bootstrap support for C0NJR6 as seed ortholog is 100%.
Bootstrap support for A8HS40 as seed ortholog is 98%.

Group of orthologs #181. Best score 508 bits
Score difference with first non-orthologous sequence - A.capsulata:508 C.reinhardtii:508

C0NUA4              	100.00%		A8ISE2              	100.00%
Bootstrap support for C0NUA4 as seed ortholog is 100%.
Bootstrap support for A8ISE2 as seed ortholog is 100%.

Group of orthologs #182. Best score 507 bits
Score difference with first non-orthologous sequence - A.capsulata:507 C.reinhardtii:507

C0NGR0              	100.00%		A8J5K4              	100.00%
Bootstrap support for C0NGR0 as seed ortholog is 100%.
Bootstrap support for A8J5K4 as seed ortholog is 100%.

Group of orthologs #183. Best score 507 bits
Score difference with first non-orthologous sequence - A.capsulata:507 C.reinhardtii:507

C0NU66              	100.00%		A8J3N8              	100.00%
Bootstrap support for C0NU66 as seed ortholog is 100%.
Bootstrap support for A8J3N8 as seed ortholog is 100%.

Group of orthologs #184. Best score 503 bits
Score difference with first non-orthologous sequence - A.capsulata:503 C.reinhardtii:503

C0NY68              	100.00%		A8IF08              	100.00%
Bootstrap support for C0NY68 as seed ortholog is 100%.
Bootstrap support for A8IF08 as seed ortholog is 100%.

Group of orthologs #185. Best score 502 bits
Score difference with first non-orthologous sequence - A.capsulata:502 C.reinhardtii:231

C0NLW7              	100.00%		A8IBN3              	100.00%
Bootstrap support for C0NLW7 as seed ortholog is 100%.
Bootstrap support for A8IBN3 as seed ortholog is 100%.

Group of orthologs #186. Best score 500 bits
Score difference with first non-orthologous sequence - A.capsulata:500 C.reinhardtii:500

C0NJC3              	100.00%		A8IXE0              	100.00%
Bootstrap support for C0NJC3 as seed ortholog is 100%.
Bootstrap support for A8IXE0 as seed ortholog is 100%.

Group of orthologs #187. Best score 499 bits
Score difference with first non-orthologous sequence - A.capsulata:424 C.reinhardtii:428

C0NSS5              	100.00%		A8HME6              	100.00%
Bootstrap support for C0NSS5 as seed ortholog is 100%.
Bootstrap support for A8HME6 as seed ortholog is 100%.

Group of orthologs #188. Best score 498 bits
Score difference with first non-orthologous sequence - A.capsulata:162 C.reinhardtii:112

C0NSW3              	100.00%		A8IJ19              	100.00%
C0NMH9              	6.56%		
Bootstrap support for C0NSW3 as seed ortholog is 99%.
Bootstrap support for A8IJ19 as seed ortholog is 99%.

Group of orthologs #189. Best score 495 bits
Score difference with first non-orthologous sequence - A.capsulata:131 C.reinhardtii:101

C0NRT5              	100.00%		A8JBP0              	100.00%
Bootstrap support for C0NRT5 as seed ortholog is 99%.
Bootstrap support for A8JBP0 as seed ortholog is 99%.

Group of orthologs #190. Best score 493 bits
Score difference with first non-orthologous sequence - A.capsulata:493 C.reinhardtii:360

C0P0L3              	100.00%		A8HM38              	100.00%
Bootstrap support for C0P0L3 as seed ortholog is 100%.
Bootstrap support for A8HM38 as seed ortholog is 100%.

Group of orthologs #191. Best score 493 bits
Score difference with first non-orthologous sequence - A.capsulata:493 C.reinhardtii:493

C0NQT5              	100.00%		A8ID74              	100.00%
Bootstrap support for C0NQT5 as seed ortholog is 100%.
Bootstrap support for A8ID74 as seed ortholog is 100%.

Group of orthologs #192. Best score 493 bits
Score difference with first non-orthologous sequence - A.capsulata:221 C.reinhardtii:144

C0NV39              	100.00%		A8IJV1              	100.00%
Bootstrap support for C0NV39 as seed ortholog is 100%.
Bootstrap support for A8IJV1 as seed ortholog is 99%.

Group of orthologs #193. Best score 493 bits
Score difference with first non-orthologous sequence - A.capsulata:493 C.reinhardtii:493

C0NX23              	100.00%		A8JH35              	100.00%
Bootstrap support for C0NX23 as seed ortholog is 100%.
Bootstrap support for A8JH35 as seed ortholog is 100%.

Group of orthologs #194. Best score 490 bits
Score difference with first non-orthologous sequence - A.capsulata:87 C.reinhardtii:235

C0NH74              	100.00%		A8I985              	100.00%
Bootstrap support for C0NH74 as seed ortholog is 92%.
Bootstrap support for A8I985 as seed ortholog is 100%.

Group of orthologs #195. Best score 486 bits
Score difference with first non-orthologous sequence - A.capsulata:486 C.reinhardtii:486

C0NT68              	100.00%		A8JES3              	100.00%
Bootstrap support for C0NT68 as seed ortholog is 100%.
Bootstrap support for A8JES3 as seed ortholog is 100%.

Group of orthologs #196. Best score 485 bits
Score difference with first non-orthologous sequence - A.capsulata:485 C.reinhardtii:485

C0NP87              	100.00%		A8IWV0              	100.00%
Bootstrap support for C0NP87 as seed ortholog is 100%.
Bootstrap support for A8IWV0 as seed ortholog is 100%.

Group of orthologs #197. Best score 484 bits
Score difference with first non-orthologous sequence - A.capsulata:83 C.reinhardtii:21

C0NBF3              	100.00%		A8J3G7              	100.00%
Bootstrap support for C0NBF3 as seed ortholog is 99%.
Bootstrap support for A8J3G7 as seed ortholog is 72%.
Alternative seed ortholog is A8J122 (21 bits away from this cluster)

Group of orthologs #198. Best score 483 bits
Score difference with first non-orthologous sequence - A.capsulata:483 C.reinhardtii:483

C0NXA6              	100.00%		A8J9T2              	100.00%
Bootstrap support for C0NXA6 as seed ortholog is 100%.
Bootstrap support for A8J9T2 as seed ortholog is 100%.

Group of orthologs #199. Best score 482 bits
Score difference with first non-orthologous sequence - A.capsulata:239 C.reinhardtii:166

C0NGZ9              	100.00%		A8HVM3              	100.00%
Bootstrap support for C0NGZ9 as seed ortholog is 100%.
Bootstrap support for A8HVM3 as seed ortholog is 99%.

Group of orthologs #200. Best score 481 bits
Score difference with first non-orthologous sequence - A.capsulata:250 C.reinhardtii:259

C0NHT4              	100.00%		A8JIJ1              	100.00%
Bootstrap support for C0NHT4 as seed ortholog is 100%.
Bootstrap support for A8JIJ1 as seed ortholog is 100%.

Group of orthologs #201. Best score 481 bits
Score difference with first non-orthologous sequence - A.capsulata:245 C.reinhardtii:6

C0P096              	100.00%		Q93Z22              	100.00%
Bootstrap support for C0P096 as seed ortholog is 99%.
Bootstrap support for Q93Z22 as seed ortholog is 90%.

Group of orthologs #202. Best score 479 bits
Score difference with first non-orthologous sequence - A.capsulata:401 C.reinhardtii:479

C0NYN0              	100.00%		A8ILF4              	100.00%
Bootstrap support for C0NYN0 as seed ortholog is 100%.
Bootstrap support for A8ILF4 as seed ortholog is 100%.

Group of orthologs #203. Best score 478 bits
Score difference with first non-orthologous sequence - A.capsulata:478 C.reinhardtii:478

C0NGA1              	100.00%		A8JCR1              	100.00%
Bootstrap support for C0NGA1 as seed ortholog is 100%.
Bootstrap support for A8JCR1 as seed ortholog is 100%.

Group of orthologs #204. Best score 477 bits
Score difference with first non-orthologous sequence - A.capsulata:477 C.reinhardtii:477

C0NTB9              	100.00%		A8HS05              	100.00%
Bootstrap support for C0NTB9 as seed ortholog is 100%.
Bootstrap support for A8HS05 as seed ortholog is 100%.

Group of orthologs #205. Best score 476 bits
Score difference with first non-orthologous sequence - A.capsulata:476 C.reinhardtii:476

C0NZU1              	100.00%		A8IBR6              	100.00%
Bootstrap support for C0NZU1 as seed ortholog is 100%.
Bootstrap support for A8IBR6 as seed ortholog is 100%.

Group of orthologs #206. Best score 473 bits
Score difference with first non-orthologous sequence - A.capsulata:109 C.reinhardtii:473

C0NNE8              	100.00%		A8IAY6              	100.00%
Bootstrap support for C0NNE8 as seed ortholog is 98%.
Bootstrap support for A8IAY6 as seed ortholog is 100%.

Group of orthologs #207. Best score 472 bits
Score difference with first non-orthologous sequence - A.capsulata:472 C.reinhardtii:472

C0NQG7              	100.00%		A8I093              	100.00%
Bootstrap support for C0NQG7 as seed ortholog is 100%.
Bootstrap support for A8I093 as seed ortholog is 100%.

Group of orthologs #208. Best score 470 bits
Score difference with first non-orthologous sequence - A.capsulata:131 C.reinhardtii:97

C0NUD8              	100.00%		A8HYH7              	100.00%
Bootstrap support for C0NUD8 as seed ortholog is 99%.
Bootstrap support for A8HYH7 as seed ortholog is 99%.

Group of orthologs #209. Best score 470 bits
Score difference with first non-orthologous sequence - A.capsulata:84 C.reinhardtii:470

C0NIQ4              	100.00%		A8J9E6              	100.00%
Bootstrap support for C0NIQ4 as seed ortholog is 99%.
Bootstrap support for A8J9E6 as seed ortholog is 100%.

Group of orthologs #210. Best score 469 bits
Score difference with first non-orthologous sequence - A.capsulata:469 C.reinhardtii:469

C0NJ74              	100.00%		A8HYU5              	100.00%
Bootstrap support for C0NJ74 as seed ortholog is 100%.
Bootstrap support for A8HYU5 as seed ortholog is 100%.

Group of orthologs #211. Best score 468 bits
Score difference with first non-orthologous sequence - A.capsulata:327 C.reinhardtii:89

C0NG26              	100.00%		A8JF80              	100.00%
Bootstrap support for C0NG26 as seed ortholog is 100%.
Bootstrap support for A8JF80 as seed ortholog is 99%.

Group of orthologs #212. Best score 467 bits
Score difference with first non-orthologous sequence - A.capsulata:96 C.reinhardtii:315

C0NBI9              	100.00%		Q6VTH1              	100.00%
                    	       		A8II54              	11.55%
Bootstrap support for C0NBI9 as seed ortholog is 98%.
Bootstrap support for Q6VTH1 as seed ortholog is 100%.

Group of orthologs #213. Best score 467 bits
Score difference with first non-orthologous sequence - A.capsulata:467 C.reinhardtii:467

C0NBD1              	100.00%		A8J168              	100.00%
Bootstrap support for C0NBD1 as seed ortholog is 100%.
Bootstrap support for A8J168 as seed ortholog is 100%.

Group of orthologs #214. Best score 465 bits
Score difference with first non-orthologous sequence - A.capsulata:465 C.reinhardtii:465

C0NC78              	100.00%		A8HRF8              	100.00%
Bootstrap support for C0NC78 as seed ortholog is 100%.
Bootstrap support for A8HRF8 as seed ortholog is 100%.

Group of orthologs #215. Best score 460 bits
Score difference with first non-orthologous sequence - A.capsulata:172 C.reinhardtii:237

C0NAR9              	100.00%		A8IT35              	100.00%
C0NXX2              	100.00%		A8IT38              	100.00%
C0NP81              	44.72%		A8J8F1              	16.02%
C0NZT3              	18.33%		A8J6J3              	11.75%
C0NLG9              	11.70%		A8IZY4              	11.35%
Bootstrap support for C0NAR9 as seed ortholog is 97%.
Bootstrap support for C0NXX2 as seed ortholog is 97%.
Bootstrap support for A8IT35 as seed ortholog is 99%.
Bootstrap support for A8IT38 as seed ortholog is 99%.

Group of orthologs #216. Best score 459 bits
Score difference with first non-orthologous sequence - A.capsulata:250 C.reinhardtii:301

C0NR45              	100.00%		A8IHM8              	100.00%
Bootstrap support for C0NR45 as seed ortholog is 100%.
Bootstrap support for A8IHM8 as seed ortholog is 100%.

Group of orthologs #217. Best score 458 bits
Score difference with first non-orthologous sequence - A.capsulata:401 C.reinhardtii:458

C0NNB4              	100.00%		A8ITK3              	100.00%
Bootstrap support for C0NNB4 as seed ortholog is 100%.
Bootstrap support for A8ITK3 as seed ortholog is 100%.

Group of orthologs #218. Best score 458 bits
Score difference with first non-orthologous sequence - A.capsulata:458 C.reinhardtii:458

C0NBC7              	100.00%		A8JAP7              	100.00%
Bootstrap support for C0NBC7 as seed ortholog is 100%.
Bootstrap support for A8JAP7 as seed ortholog is 100%.

Group of orthologs #219. Best score 456 bits
Score difference with first non-orthologous sequence - A.capsulata:228 C.reinhardtii:228

C0NF35              	100.00%		A8ICS4              	100.00%
Bootstrap support for C0NF35 as seed ortholog is 100%.
Bootstrap support for A8ICS4 as seed ortholog is 100%.

Group of orthologs #220. Best score 456 bits
Score difference with first non-orthologous sequence - A.capsulata:456 C.reinhardtii:456

C0ND01              	100.00%		A8IJJ8              	100.00%
Bootstrap support for C0ND01 as seed ortholog is 100%.
Bootstrap support for A8IJJ8 as seed ortholog is 100%.

Group of orthologs #221. Best score 456 bits
Score difference with first non-orthologous sequence - A.capsulata:290 C.reinhardtii:184

C0NGS1              	100.00%		A8IAJ1              	100.00%
Bootstrap support for C0NGS1 as seed ortholog is 100%.
Bootstrap support for A8IAJ1 as seed ortholog is 100%.

Group of orthologs #222. Best score 455 bits
Score difference with first non-orthologous sequence - A.capsulata:63 C.reinhardtii:69

C0NFQ6              	100.00%		A8JDN1              	100.00%
Bootstrap support for C0NFQ6 as seed ortholog is 97%.
Bootstrap support for A8JDN1 as seed ortholog is 97%.

Group of orthologs #223. Best score 455 bits
Score difference with first non-orthologous sequence - A.capsulata:235 C.reinhardtii:401

C0P0H5              	100.00%		A8IPE0              	100.00%
Bootstrap support for C0P0H5 as seed ortholog is 100%.
Bootstrap support for A8IPE0 as seed ortholog is 100%.

Group of orthologs #224. Best score 454 bits
Score difference with first non-orthologous sequence - A.capsulata:454 C.reinhardtii:330

C0NJ54              	100.00%		P17746              	100.00%
                    	       		A8HXR2              	9.09%
Bootstrap support for C0NJ54 as seed ortholog is 100%.
Bootstrap support for P17746 as seed ortholog is 100%.

Group of orthologs #225. Best score 454 bits
Score difference with first non-orthologous sequence - A.capsulata:395 C.reinhardtii:246

C0NXH6              	100.00%		A8JFR4              	100.00%
Bootstrap support for C0NXH6 as seed ortholog is 100%.
Bootstrap support for A8JFR4 as seed ortholog is 100%.

Group of orthologs #226. Best score 453 bits
Score difference with first non-orthologous sequence - A.capsulata:453 C.reinhardtii:453

C0NC53              	100.00%		A8IDM1              	100.00%
Bootstrap support for C0NC53 as seed ortholog is 100%.
Bootstrap support for A8IDM1 as seed ortholog is 100%.

Group of orthologs #227. Best score 453 bits
Score difference with first non-orthologous sequence - A.capsulata:453 C.reinhardtii:453

C0NYX1              	100.00%		A8IRK2              	100.00%
Bootstrap support for C0NYX1 as seed ortholog is 100%.
Bootstrap support for A8IRK2 as seed ortholog is 100%.

Group of orthologs #228. Best score 452 bits
Score difference with first non-orthologous sequence - A.capsulata:452 C.reinhardtii:29

C0NFK8              	100.00%		A8ILR9              	100.00%
Bootstrap support for C0NFK8 as seed ortholog is 100%.
Bootstrap support for A8ILR9 as seed ortholog is 81%.

Group of orthologs #229. Best score 452 bits
Score difference with first non-orthologous sequence - A.capsulata:32 C.reinhardtii:141

C0NX00              	100.00%		A8IIL1              	100.00%
Bootstrap support for C0NX00 as seed ortholog is 73%.
Alternative seed ortholog is C0NHG2 (32 bits away from this cluster)
Bootstrap support for A8IIL1 as seed ortholog is 99%.

Group of orthologs #230. Best score 451 bits
Score difference with first non-orthologous sequence - A.capsulata:451 C.reinhardtii:451

C0NUL1              	100.00%		A8I9R1              	100.00%
Bootstrap support for C0NUL1 as seed ortholog is 100%.
Bootstrap support for A8I9R1 as seed ortholog is 100%.

Group of orthologs #231. Best score 448 bits
Score difference with first non-orthologous sequence - A.capsulata:355 C.reinhardtii:341

C0NJ63              	100.00%		A8HZA9              	100.00%
Bootstrap support for C0NJ63 as seed ortholog is 100%.
Bootstrap support for A8HZA9 as seed ortholog is 100%.

Group of orthologs #232. Best score 445 bits
Score difference with first non-orthologous sequence - A.capsulata:445 C.reinhardtii:445

C0NQE8              	100.00%		A8IRV6              	100.00%
Bootstrap support for C0NQE8 as seed ortholog is 100%.
Bootstrap support for A8IRV6 as seed ortholog is 100%.

Group of orthologs #233. Best score 445 bits
Score difference with first non-orthologous sequence - A.capsulata:348 C.reinhardtii:376

C0NLK3              	100.00%		A8IY20              	100.00%
Bootstrap support for C0NLK3 as seed ortholog is 100%.
Bootstrap support for A8IY20 as seed ortholog is 100%.

Group of orthologs #234. Best score 441 bits
Score difference with first non-orthologous sequence - A.capsulata:363 C.reinhardtii:288

C0NUF9              	100.00%		A8J1B6              	100.00%
Bootstrap support for C0NUF9 as seed ortholog is 100%.
Bootstrap support for A8J1B6 as seed ortholog is 100%.

Group of orthologs #235. Best score 440 bits
Score difference with first non-orthologous sequence - A.capsulata:440 C.reinhardtii:440

C0NF46              	100.00%		A8IID0              	100.00%
Bootstrap support for C0NF46 as seed ortholog is 100%.
Bootstrap support for A8IID0 as seed ortholog is 100%.

Group of orthologs #236. Best score 438 bits
Score difference with first non-orthologous sequence - A.capsulata:438 C.reinhardtii:218

C0NED0              	100.00%		A8JGK6              	100.00%
Bootstrap support for C0NED0 as seed ortholog is 100%.
Bootstrap support for A8JGK6 as seed ortholog is 99%.

Group of orthologs #237. Best score 434 bits
Score difference with first non-orthologous sequence - A.capsulata:434 C.reinhardtii:434

C0NYL2              	100.00%		A8J5R5              	100.00%
Bootstrap support for C0NYL2 as seed ortholog is 100%.
Bootstrap support for A8J5R5 as seed ortholog is 100%.

Group of orthologs #238. Best score 433 bits
Score difference with first non-orthologous sequence - A.capsulata:125 C.reinhardtii:57

C0NMW6              	100.00%		A8I263              	100.00%
Bootstrap support for C0NMW6 as seed ortholog is 99%.
Bootstrap support for A8I263 as seed ortholog is 92%.

Group of orthologs #239. Best score 433 bits
Score difference with first non-orthologous sequence - A.capsulata:339 C.reinhardtii:433

C0NXJ2              	100.00%		A8J146              	100.00%
Bootstrap support for C0NXJ2 as seed ortholog is 100%.
Bootstrap support for A8J146 as seed ortholog is 100%.

Group of orthologs #240. Best score 432 bits
Score difference with first non-orthologous sequence - A.capsulata:432 C.reinhardtii:432

C0NZZ0              	100.00%		A8IE23              	100.00%
Bootstrap support for C0NZZ0 as seed ortholog is 100%.
Bootstrap support for A8IE23 as seed ortholog is 100%.

Group of orthologs #241. Best score 431 bits
Score difference with first non-orthologous sequence - A.capsulata:431 C.reinhardtii:431

C0NT48              	100.00%		A8J1D2              	100.00%
Bootstrap support for C0NT48 as seed ortholog is 100%.
Bootstrap support for A8J1D2 as seed ortholog is 100%.

Group of orthologs #242. Best score 428 bits
Score difference with first non-orthologous sequence - A.capsulata:428 C.reinhardtii:428

C0NLW4              	100.00%		A8IBR0              	100.00%
Bootstrap support for C0NLW4 as seed ortholog is 100%.
Bootstrap support for A8IBR0 as seed ortholog is 100%.

Group of orthologs #243. Best score 428 bits
Score difference with first non-orthologous sequence - A.capsulata:428 C.reinhardtii:428

C0NSD3              	100.00%		A8I7H0              	100.00%
Bootstrap support for C0NSD3 as seed ortholog is 100%.
Bootstrap support for A8I7H0 as seed ortholog is 100%.

Group of orthologs #244. Best score 426 bits
Score difference with first non-orthologous sequence - A.capsulata:426 C.reinhardtii:426

C0NYV1              	100.00%		A8I1W3              	100.00%
Bootstrap support for C0NYV1 as seed ortholog is 100%.
Bootstrap support for A8I1W3 as seed ortholog is 100%.

Group of orthologs #245. Best score 424 bits
Score difference with first non-orthologous sequence - A.capsulata:424 C.reinhardtii:424

C0NEV9              	100.00%		A8IA86              	100.00%
Bootstrap support for C0NEV9 as seed ortholog is 100%.
Bootstrap support for A8IA86 as seed ortholog is 100%.

Group of orthologs #246. Best score 423 bits
Score difference with first non-orthologous sequence - A.capsulata:254 C.reinhardtii:302

C0NE87              	100.00%		A8I9J2              	100.00%
Bootstrap support for C0NE87 as seed ortholog is 99%.
Bootstrap support for A8I9J2 as seed ortholog is 100%.

Group of orthologs #247. Best score 423 bits
Score difference with first non-orthologous sequence - A.capsulata:423 C.reinhardtii:250

C0NTR5              	100.00%		A8HS79              	100.00%
Bootstrap support for C0NTR5 as seed ortholog is 100%.
Bootstrap support for A8HS79 as seed ortholog is 100%.

Group of orthologs #248. Best score 423 bits
Score difference with first non-orthologous sequence - A.capsulata:423 C.reinhardtii:423

C0NN00              	100.00%		A8IWF2              	100.00%
Bootstrap support for C0NN00 as seed ortholog is 100%.
Bootstrap support for A8IWF2 as seed ortholog is 100%.

Group of orthologs #249. Best score 423 bits
Score difference with first non-orthologous sequence - A.capsulata:375 C.reinhardtii:358

C0NTH7              	100.00%		A8J5R1              	100.00%
Bootstrap support for C0NTH7 as seed ortholog is 100%.
Bootstrap support for A8J5R1 as seed ortholog is 100%.

Group of orthologs #250. Best score 422 bits
Score difference with first non-orthologous sequence - A.capsulata:228 C.reinhardtii:368

C0NJR8              	100.00%		A8J3F9              	100.00%
Bootstrap support for C0NJR8 as seed ortholog is 100%.
Bootstrap support for A8J3F9 as seed ortholog is 100%.

Group of orthologs #251. Best score 421 bits
Score difference with first non-orthologous sequence - A.capsulata:421 C.reinhardtii:421

C0NSV1              	100.00%		A8JF71              	100.00%
Bootstrap support for C0NSV1 as seed ortholog is 100%.
Bootstrap support for A8JF71 as seed ortholog is 100%.

Group of orthologs #252. Best score 420 bits
Score difference with first non-orthologous sequence - A.capsulata:420 C.reinhardtii:420

C0NSJ2              	100.00%		A8IFZ9              	100.00%
Bootstrap support for C0NSJ2 as seed ortholog is 100%.
Bootstrap support for A8IFZ9 as seed ortholog is 100%.

Group of orthologs #253. Best score 420 bits
Score difference with first non-orthologous sequence - A.capsulata:420 C.reinhardtii:128

C0NRN1              	100.00%		A8JHR9              	100.00%
Bootstrap support for C0NRN1 as seed ortholog is 100%.
Bootstrap support for A8JHR9 as seed ortholog is 99%.

Group of orthologs #254. Best score 420 bits
Score difference with first non-orthologous sequence - A.capsulata:333 C.reinhardtii:420

C0NZE1              	100.00%		A8JBG4              	100.00%
Bootstrap support for C0NZE1 as seed ortholog is 100%.
Bootstrap support for A8JBG4 as seed ortholog is 100%.

Group of orthologs #255. Best score 420 bits
Score difference with first non-orthologous sequence - A.capsulata:420 C.reinhardtii:420

C0P194              	100.00%		A8JCG5              	100.00%
Bootstrap support for C0P194 as seed ortholog is 100%.
Bootstrap support for A8JCG5 as seed ortholog is 100%.

Group of orthologs #256. Best score 419 bits
Score difference with first non-orthologous sequence - A.capsulata:224 C.reinhardtii:419

C0NPM8              	100.00%		A8JHA8              	100.00%
Bootstrap support for C0NPM8 as seed ortholog is 99%.
Bootstrap support for A8JHA8 as seed ortholog is 100%.

Group of orthologs #257. Best score 417 bits
Score difference with first non-orthologous sequence - A.capsulata:417 C.reinhardtii:417

C0NTH0              	100.00%		A8HNF4              	100.00%
Bootstrap support for C0NTH0 as seed ortholog is 100%.
Bootstrap support for A8HNF4 as seed ortholog is 100%.

Group of orthologs #258. Best score 416 bits
Score difference with first non-orthologous sequence - A.capsulata:332 C.reinhardtii:297

C0NYI6              	100.00%		A8IT31              	100.00%
C0NJR5              	35.63%		
Bootstrap support for C0NYI6 as seed ortholog is 100%.
Bootstrap support for A8IT31 as seed ortholog is 100%.

Group of orthologs #259. Best score 415 bits
Score difference with first non-orthologous sequence - A.capsulata:225 C.reinhardtii:212

C0NZ02              	100.00%		A8JBC7              	100.00%
Bootstrap support for C0NZ02 as seed ortholog is 100%.
Bootstrap support for A8JBC7 as seed ortholog is 100%.

Group of orthologs #260. Best score 413 bits
Score difference with first non-orthologous sequence - A.capsulata:413 C.reinhardtii:413

C0NPQ1              	100.00%		A8IWM1              	100.00%
C0NEI5              	8.75%		
Bootstrap support for C0NPQ1 as seed ortholog is 100%.
Bootstrap support for A8IWM1 as seed ortholog is 100%.

Group of orthologs #261. Best score 410 bits
Score difference with first non-orthologous sequence - A.capsulata:410 C.reinhardtii:410

C0NEP5              	100.00%		A8HQU3              	100.00%
Bootstrap support for C0NEP5 as seed ortholog is 100%.
Bootstrap support for A8HQU3 as seed ortholog is 100%.

Group of orthologs #262. Best score 409 bits
Score difference with first non-orthologous sequence - A.capsulata:409 C.reinhardtii:327

C0NB99              	100.00%		A8IRV0              	100.00%
Bootstrap support for C0NB99 as seed ortholog is 100%.
Bootstrap support for A8IRV0 as seed ortholog is 100%.

Group of orthologs #263. Best score 408 bits
Score difference with first non-orthologous sequence - A.capsulata:408 C.reinhardtii:408

C0NCX5              	100.00%		A8IJG8              	100.00%
Bootstrap support for C0NCX5 as seed ortholog is 100%.
Bootstrap support for A8IJG8 as seed ortholog is 100%.

Group of orthologs #264. Best score 407 bits
Score difference with first non-orthologous sequence - A.capsulata:278 C.reinhardtii:407

C0NXY6              	100.00%		A8ITF6              	100.00%
Bootstrap support for C0NXY6 as seed ortholog is 100%.
Bootstrap support for A8ITF6 as seed ortholog is 100%.

Group of orthologs #265. Best score 406 bits
Score difference with first non-orthologous sequence - A.capsulata:406 C.reinhardtii:76

C0NIA2              	100.00%		A8HZZ4              	100.00%
Bootstrap support for C0NIA2 as seed ortholog is 100%.
Bootstrap support for A8HZZ4 as seed ortholog is 96%.

Group of orthologs #266. Best score 405 bits
Score difference with first non-orthologous sequence - A.capsulata:405 C.reinhardtii:405

C0NSV8              	100.00%		A8IUI9              	100.00%
Bootstrap support for C0NSV8 as seed ortholog is 100%.
Bootstrap support for A8IUI9 as seed ortholog is 100%.

Group of orthologs #267. Best score 404 bits
Score difference with first non-orthologous sequence - A.capsulata:146 C.reinhardtii:103

C0NRF2              	100.00%		A8ISF0              	100.00%
Bootstrap support for C0NRF2 as seed ortholog is 99%.
Bootstrap support for A8ISF0 as seed ortholog is 99%.

Group of orthologs #268. Best score 404 bits
Score difference with first non-orthologous sequence - A.capsulata:404 C.reinhardtii:404

C0NGI0              	100.00%		A8J8C7              	100.00%
Bootstrap support for C0NGI0 as seed ortholog is 100%.
Bootstrap support for A8J8C7 as seed ortholog is 100%.

Group of orthologs #269. Best score 403 bits
Score difference with first non-orthologous sequence - A.capsulata:403 C.reinhardtii:403

C0NQY8              	100.00%		A8IWJ8              	100.00%
Bootstrap support for C0NQY8 as seed ortholog is 100%.
Bootstrap support for A8IWJ8 as seed ortholog is 100%.

Group of orthologs #270. Best score 402 bits
Score difference with first non-orthologous sequence - A.capsulata:328 C.reinhardtii:402

C0NE91              	100.00%		A8IRT6              	100.00%
Bootstrap support for C0NE91 as seed ortholog is 100%.
Bootstrap support for A8IRT6 as seed ortholog is 100%.

Group of orthologs #271. Best score 402 bits
Score difference with first non-orthologous sequence - A.capsulata:402 C.reinhardtii:347

C0NEL3              	100.00%		A8J5Y9              	100.00%
Bootstrap support for C0NEL3 as seed ortholog is 100%.
Bootstrap support for A8J5Y9 as seed ortholog is 100%.

Group of orthologs #272. Best score 401 bits
Score difference with first non-orthologous sequence - A.capsulata:401 C.reinhardtii:191

C0NRY6              	100.00%		A8J280              	100.00%
Bootstrap support for C0NRY6 as seed ortholog is 100%.
Bootstrap support for A8J280 as seed ortholog is 99%.

Group of orthologs #273. Best score 400 bits
Score difference with first non-orthologous sequence - A.capsulata:400 C.reinhardtii:164

C0NJH1              	100.00%		A8I495              	100.00%
Bootstrap support for C0NJH1 as seed ortholog is 100%.
Bootstrap support for A8I495 as seed ortholog is 99%.

Group of orthologs #274. Best score 399 bits
Score difference with first non-orthologous sequence - A.capsulata:10 C.reinhardtii:399

C0NGY7              	100.00%		A8J1X8              	100.00%
Bootstrap support for C0NGY7 as seed ortholog is 64%.
Alternative seed ortholog is C0NBX5 (10 bits away from this cluster)
Bootstrap support for A8J1X8 as seed ortholog is 100%.

Group of orthologs #275. Best score 398 bits
Score difference with first non-orthologous sequence - A.capsulata:193 C.reinhardtii:6

C0NKY0              	100.00%		A8IRS6              	100.00%
Bootstrap support for C0NKY0 as seed ortholog is 99%.
Bootstrap support for A8IRS6 as seed ortholog is 60%.
Alternative seed ortholog is A8IBD5 (6 bits away from this cluster)

Group of orthologs #276. Best score 398 bits
Score difference with first non-orthologous sequence - A.capsulata:398 C.reinhardtii:158

C0NXN7              	100.00%		A8J1Z0              	100.00%
Bootstrap support for C0NXN7 as seed ortholog is 100%.
Bootstrap support for A8J1Z0 as seed ortholog is 99%.

Group of orthologs #277. Best score 397 bits
Score difference with first non-orthologous sequence - A.capsulata:397 C.reinhardtii:397

C0NBF2              	100.00%		A8HPA0              	100.00%
Bootstrap support for C0NBF2 as seed ortholog is 100%.
Bootstrap support for A8HPA0 as seed ortholog is 100%.

Group of orthologs #278. Best score 397 bits
Score difference with first non-orthologous sequence - A.capsulata:397 C.reinhardtii:48

C0NN56              	100.00%		A8I305              	100.00%
Bootstrap support for C0NN56 as seed ortholog is 100%.
Bootstrap support for A8I305 as seed ortholog is 90%.

Group of orthologs #279. Best score 397 bits
Score difference with first non-orthologous sequence - A.capsulata:291 C.reinhardtii:295

C0NEW1              	100.00%		A8J5P7              	100.00%
Bootstrap support for C0NEW1 as seed ortholog is 100%.
Bootstrap support for A8J5P7 as seed ortholog is 100%.

Group of orthologs #280. Best score 396 bits
Score difference with first non-orthologous sequence - A.capsulata:396 C.reinhardtii:396

C0NCW5              	100.00%		A8J5T5              	100.00%
Bootstrap support for C0NCW5 as seed ortholog is 100%.
Bootstrap support for A8J5T5 as seed ortholog is 100%.

Group of orthologs #281. Best score 396 bits
Score difference with first non-orthologous sequence - A.capsulata:396 C.reinhardtii:396

C0NZU8              	100.00%		A8IBJ5              	100.00%
Bootstrap support for C0NZU8 as seed ortholog is 100%.
Bootstrap support for A8IBJ5 as seed ortholog is 100%.

Group of orthologs #282. Best score 396 bits
Score difference with first non-orthologous sequence - A.capsulata:161 C.reinhardtii:188

C0NNM5              	100.00%		A8J3P5              	100.00%
Bootstrap support for C0NNM5 as seed ortholog is 99%.
Bootstrap support for A8J3P5 as seed ortholog is 100%.

Group of orthologs #283. Best score 396 bits
Score difference with first non-orthologous sequence - A.capsulata:343 C.reinhardtii:396

C0NVN2              	100.00%		A8JGX1              	100.00%
Bootstrap support for C0NVN2 as seed ortholog is 100%.
Bootstrap support for A8JGX1 as seed ortholog is 100%.

Group of orthologs #284. Best score 395 bits
Score difference with first non-orthologous sequence - A.capsulata:203 C.reinhardtii:191

C0NNU4              	100.00%		A8J3M6              	100.00%
Bootstrap support for C0NNU4 as seed ortholog is 100%.
Bootstrap support for A8J3M6 as seed ortholog is 99%.

Group of orthologs #285. Best score 395 bits
Score difference with first non-orthologous sequence - A.capsulata:182 C.reinhardtii:128

C0NUM3              	100.00%		A8IZ49              	100.00%
Bootstrap support for C0NUM3 as seed ortholog is 99%.
Bootstrap support for A8IZ49 as seed ortholog is 99%.

Group of orthologs #286. Best score 393 bits
Score difference with first non-orthologous sequence - A.capsulata:393 C.reinhardtii:393

C0NTG5              	100.00%		A8J0I0              	100.00%
Bootstrap support for C0NTG5 as seed ortholog is 100%.
Bootstrap support for A8J0I0 as seed ortholog is 100%.

Group of orthologs #287. Best score 393 bits
Score difference with first non-orthologous sequence - A.capsulata:393 C.reinhardtii:393

C0NSB0              	100.00%		A8J5U1              	100.00%
Bootstrap support for C0NSB0 as seed ortholog is 100%.
Bootstrap support for A8J5U1 as seed ortholog is 100%.

Group of orthologs #288. Best score 392 bits
Score difference with first non-orthologous sequence - A.capsulata:392 C.reinhardtii:392

C0P1C9              	100.00%		A8J6Q7              	100.00%
Bootstrap support for C0P1C9 as seed ortholog is 100%.
Bootstrap support for A8J6Q7 as seed ortholog is 100%.

Group of orthologs #289. Best score 391 bits
Score difference with first non-orthologous sequence - A.capsulata:391 C.reinhardtii:319

C0NLE4              	100.00%		A8II65              	100.00%
                    	       		A8IB03              	72.69%
                    	       		A8IB05              	72.69%
                    	       		A8II76              	68.28%
Bootstrap support for C0NLE4 as seed ortholog is 100%.
Bootstrap support for A8II65 as seed ortholog is 100%.

Group of orthologs #290. Best score 390 bits
Score difference with first non-orthologous sequence - A.capsulata:390 C.reinhardtii:390

C0NL18              	100.00%		A8IW34              	100.00%
Bootstrap support for C0NL18 as seed ortholog is 100%.
Bootstrap support for A8IW34 as seed ortholog is 100%.

Group of orthologs #291. Best score 389 bits
Score difference with first non-orthologous sequence - A.capsulata:261 C.reinhardtii:389

C0NLI0              	100.00%		Q8LP71              	100.00%
                    	       		Q8LP69              	65.23%
                    	       		A8ISD6              	64.97%
                    	       		A8ISD7              	64.97%
Bootstrap support for C0NLI0 as seed ortholog is 100%.
Bootstrap support for Q8LP71 as seed ortholog is 100%.

Group of orthologs #292. Best score 389 bits
Score difference with first non-orthologous sequence - A.capsulata:389 C.reinhardtii:389

C0NME4              	100.00%		A8HUI3              	100.00%
Bootstrap support for C0NME4 as seed ortholog is 100%.
Bootstrap support for A8HUI3 as seed ortholog is 100%.

Group of orthologs #293. Best score 388 bits
Score difference with first non-orthologous sequence - A.capsulata:388 C.reinhardtii:388

C0NBQ1              	100.00%		A8ILT1              	100.00%
Bootstrap support for C0NBQ1 as seed ortholog is 100%.
Bootstrap support for A8ILT1 as seed ortholog is 100%.

Group of orthologs #294. Best score 388 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.reinhardtii:81

C0NJA3              	100.00%		Q6Q242              	100.00%
Bootstrap support for C0NJA3 as seed ortholog is 99%.
Bootstrap support for Q6Q242 as seed ortholog is 99%.

Group of orthologs #295. Best score 386 bits
Score difference with first non-orthologous sequence - A.capsulata:386 C.reinhardtii:386

C0NLB7              	100.00%		A8IKA1              	100.00%
Bootstrap support for C0NLB7 as seed ortholog is 100%.
Bootstrap support for A8IKA1 as seed ortholog is 100%.

Group of orthologs #296. Best score 385 bits
Score difference with first non-orthologous sequence - A.capsulata:385 C.reinhardtii:4

C0NQX1              	100.00%		A8J7G2              	100.00%
Bootstrap support for C0NQX1 as seed ortholog is 100%.
Bootstrap support for A8J7G2 as seed ortholog is 63%.
Alternative seed ortholog is A8J9N6 (4 bits away from this cluster)

Group of orthologs #297. Best score 384 bits
Score difference with first non-orthologous sequence - A.capsulata:184 C.reinhardtii:110

C0NQL1              	100.00%		A8IV98              	100.00%
Bootstrap support for C0NQL1 as seed ortholog is 99%.
Bootstrap support for A8IV98 as seed ortholog is 99%.

Group of orthologs #298. Best score 384 bits
Score difference with first non-orthologous sequence - A.capsulata:384 C.reinhardtii:215

C0NMS4              	100.00%		A8JB97              	100.00%
Bootstrap support for C0NMS4 as seed ortholog is 100%.
Bootstrap support for A8JB97 as seed ortholog is 99%.

Group of orthologs #299. Best score 384 bits
Score difference with first non-orthologous sequence - A.capsulata:384 C.reinhardtii:384

C0NR28              	100.00%		A8JBB8              	100.00%
Bootstrap support for C0NR28 as seed ortholog is 100%.
Bootstrap support for A8JBB8 as seed ortholog is 100%.

Group of orthologs #300. Best score 383 bits
Score difference with first non-orthologous sequence - A.capsulata:383 C.reinhardtii:136

C0NTW5              	100.00%		A8IET6              	100.00%
Bootstrap support for C0NTW5 as seed ortholog is 100%.
Bootstrap support for A8IET6 as seed ortholog is 99%.

Group of orthologs #301. Best score 383 bits
Score difference with first non-orthologous sequence - A.capsulata:383 C.reinhardtii:383

C0NRC1              	100.00%		A8IW43              	100.00%
Bootstrap support for C0NRC1 as seed ortholog is 100%.
Bootstrap support for A8IW43 as seed ortholog is 100%.

Group of orthologs #302. Best score 382 bits
Score difference with first non-orthologous sequence - A.capsulata:98 C.reinhardtii:382

C0NAK7              	100.00%		A8IGM2              	100.00%
Bootstrap support for C0NAK7 as seed ortholog is 97%.
Bootstrap support for A8IGM2 as seed ortholog is 100%.

Group of orthologs #303. Best score 380 bits
Score difference with first non-orthologous sequence - A.capsulata:136 C.reinhardtii:167

C0NJN4              	100.00%		A8HQF5              	100.00%
Bootstrap support for C0NJN4 as seed ortholog is 99%.
Bootstrap support for A8HQF5 as seed ortholog is 99%.

Group of orthologs #304. Best score 380 bits
Score difference with first non-orthologous sequence - A.capsulata:380 C.reinhardtii:380

C0NV20              	100.00%		A8JGK5              	100.00%
Bootstrap support for C0NV20 as seed ortholog is 100%.
Bootstrap support for A8JGK5 as seed ortholog is 100%.

Group of orthologs #305. Best score 379 bits
Score difference with first non-orthologous sequence - A.capsulata:379 C.reinhardtii:379

C0NR08              	100.00%		A8J3M3              	100.00%
Bootstrap support for C0NR08 as seed ortholog is 100%.
Bootstrap support for A8J3M3 as seed ortholog is 100%.

Group of orthologs #306. Best score 379 bits
Score difference with first non-orthologous sequence - A.capsulata:275 C.reinhardtii:255

C0NZ91              	100.00%		A8ITS8              	100.00%
Bootstrap support for C0NZ91 as seed ortholog is 100%.
Bootstrap support for A8ITS8 as seed ortholog is 100%.

Group of orthologs #307. Best score 377 bits
Score difference with first non-orthologous sequence - A.capsulata:377 C.reinhardtii:377

C0NRL6              	100.00%		A8HPR5              	100.00%
C0NX33              	32.73%		A8J484              	42.97%
Bootstrap support for C0NRL6 as seed ortholog is 100%.
Bootstrap support for A8HPR5 as seed ortholog is 100%.

Group of orthologs #308. Best score 376 bits
Score difference with first non-orthologous sequence - A.capsulata:376 C.reinhardtii:24

C0NM72              	100.00%		A8HWC2              	100.00%
Bootstrap support for C0NM72 as seed ortholog is 100%.
Bootstrap support for A8HWC2 as seed ortholog is 71%.
Alternative seed ortholog is A8IUW1 (24 bits away from this cluster)

Group of orthologs #309. Best score 375 bits
Score difference with first non-orthologous sequence - A.capsulata:375 C.reinhardtii:375

C0NK09              	100.00%		A8IYU6              	100.00%
                    	       		A8IYU5              	22.17%
Bootstrap support for C0NK09 as seed ortholog is 100%.
Bootstrap support for A8IYU6 as seed ortholog is 100%.

Group of orthologs #310. Best score 374 bits
Score difference with first non-orthologous sequence - A.capsulata:374 C.reinhardtii:374

C0P0F2              	100.00%		A8JHC1              	100.00%
Bootstrap support for C0P0F2 as seed ortholog is 100%.
Bootstrap support for A8JHC1 as seed ortholog is 100%.

Group of orthologs #311. Best score 373 bits
Score difference with first non-orthologous sequence - A.capsulata:373 C.reinhardtii:373

C0NWY5              	100.00%		A8JH34              	100.00%
                    	       		A8JH33              	69.54%
                    	       		A8IDC5              	58.69%
                    	       		A8IDD2              	51.98%
Bootstrap support for C0NWY5 as seed ortholog is 100%.
Bootstrap support for A8JH34 as seed ortholog is 100%.

Group of orthologs #312. Best score 373 bits
Score difference with first non-orthologous sequence - A.capsulata:42 C.reinhardtii:83

C0NNK4              	100.00%		A8J0R7              	100.00%
Bootstrap support for C0NNK4 as seed ortholog is 90%.
Bootstrap support for A8J0R7 as seed ortholog is 99%.

Group of orthologs #313. Best score 373 bits
Score difference with first non-orthologous sequence - A.capsulata:11 C.reinhardtii:373

C0NVF6              	100.00%		A8J537              	100.00%
Bootstrap support for C0NVF6 as seed ortholog is 62%.
Alternative seed ortholog is C0NZ19 (11 bits away from this cluster)
Bootstrap support for A8J537 as seed ortholog is 100%.

Group of orthologs #314. Best score 370 bits
Score difference with first non-orthologous sequence - A.capsulata:180 C.reinhardtii:370

C0NUB7              	100.00%		A8IA67              	100.00%
Bootstrap support for C0NUB7 as seed ortholog is 99%.
Bootstrap support for A8IA67 as seed ortholog is 100%.

Group of orthologs #315. Best score 370 bits
Score difference with first non-orthologous sequence - A.capsulata:370 C.reinhardtii:370

C0NQY7              	100.00%		A8JFT1              	100.00%
Bootstrap support for C0NQY7 as seed ortholog is 100%.
Bootstrap support for A8JFT1 as seed ortholog is 100%.

Group of orthologs #316. Best score 370 bits
Score difference with first non-orthologous sequence - A.capsulata:215 C.reinhardtii:194

C0NYT2              	100.00%		A8JHL1              	100.00%
Bootstrap support for C0NYT2 as seed ortholog is 99%.
Bootstrap support for A8JHL1 as seed ortholog is 99%.

Group of orthologs #317. Best score 369 bits
Score difference with first non-orthologous sequence - A.capsulata:369 C.reinhardtii:369

C0NSD5              	100.00%		A8I161              	100.00%
Bootstrap support for C0NSD5 as seed ortholog is 100%.
Bootstrap support for A8I161 as seed ortholog is 100%.

Group of orthologs #318. Best score 369 bits
Score difference with first non-orthologous sequence - A.capsulata:369 C.reinhardtii:369

C0NSB3              	100.00%		A8J5F7              	100.00%
Bootstrap support for C0NSB3 as seed ortholog is 100%.
Bootstrap support for A8J5F7 as seed ortholog is 100%.

Group of orthologs #319. Best score 368 bits
Score difference with first non-orthologous sequence - A.capsulata:368 C.reinhardtii:368

C0NGC3              	100.00%		A8J2Z6              	100.00%
Bootstrap support for C0NGC3 as seed ortholog is 100%.
Bootstrap support for A8J2Z6 as seed ortholog is 100%.

Group of orthologs #320. Best score 368 bits
Score difference with first non-orthologous sequence - A.capsulata:368 C.reinhardtii:368

C0NYR4              	100.00%		A8IQ05              	100.00%
Bootstrap support for C0NYR4 as seed ortholog is 100%.
Bootstrap support for A8IQ05 as seed ortholog is 100%.

Group of orthologs #321. Best score 366 bits
Score difference with first non-orthologous sequence - A.capsulata:366 C.reinhardtii:366

C0NEB4              	100.00%		A8JCY9              	100.00%
Bootstrap support for C0NEB4 as seed ortholog is 100%.
Bootstrap support for A8JCY9 as seed ortholog is 100%.

Group of orthologs #322. Best score 365 bits
Score difference with first non-orthologous sequence - A.capsulata:365 C.reinhardtii:365

C0NKC5              	100.00%		A8JF90              	100.00%
                    	       		A8JF89              	40.06%
                    	       		A8J6D9              	24.16%
                    	       		A8JF52              	19.87%
                    	       		A8IQ59              	13.37%
                    	       		A8JIU8              	7.01%
                    	       		A8IVU6              	6.71%
                    	       		A8IHW3              	6.15%
                    	       		A8ISH7              	5.66%
Bootstrap support for C0NKC5 as seed ortholog is 100%.
Bootstrap support for A8JF90 as seed ortholog is 100%.

Group of orthologs #323. Best score 364 bits
Score difference with first non-orthologous sequence - A.capsulata:39 C.reinhardtii:364

C0NJW7              	100.00%		A8J6J6              	100.00%
C0NLB5              	10.04%		
C0NVA0              	5.36%		
Bootstrap support for C0NJW7 as seed ortholog is 84%.
Bootstrap support for A8J6J6 as seed ortholog is 100%.

Group of orthologs #324. Best score 364 bits
Score difference with first non-orthologous sequence - A.capsulata:364 C.reinhardtii:364

C0NLP3              	100.00%		A8IMP6              	100.00%
Bootstrap support for C0NLP3 as seed ortholog is 100%.
Bootstrap support for A8IMP6 as seed ortholog is 100%.

Group of orthologs #325. Best score 364 bits
Score difference with first non-orthologous sequence - A.capsulata:364 C.reinhardtii:364

C0NHJ0              	100.00%		A8J027              	100.00%
Bootstrap support for C0NHJ0 as seed ortholog is 100%.
Bootstrap support for A8J027 as seed ortholog is 100%.

Group of orthologs #326. Best score 364 bits
Score difference with first non-orthologous sequence - A.capsulata:364 C.reinhardtii:364

C0ND28              	100.00%		A8J5W8              	100.00%
Bootstrap support for C0ND28 as seed ortholog is 100%.
Bootstrap support for A8J5W8 as seed ortholog is 100%.

Group of orthologs #327. Best score 364 bits
Score difference with first non-orthologous sequence - A.capsulata:364 C.reinhardtii:364

C0NV40              	100.00%		A8IZ78              	100.00%
Bootstrap support for C0NV40 as seed ortholog is 100%.
Bootstrap support for A8IZ78 as seed ortholog is 100%.

Group of orthologs #328. Best score 363 bits
Score difference with first non-orthologous sequence - A.capsulata:363 C.reinhardtii:363

C0NLI3              	100.00%		A8J7Z3              	100.00%
C0NMF9              	19.38%		A8JD38              	7.64%
C0NKK8              	16.26%		
Bootstrap support for C0NLI3 as seed ortholog is 100%.
Bootstrap support for A8J7Z3 as seed ortholog is 100%.

Group of orthologs #329. Best score 363 bits
Score difference with first non-orthologous sequence - A.capsulata:264 C.reinhardtii:172

C0NFH8              	100.00%		A8J7E4              	100.00%
Bootstrap support for C0NFH8 as seed ortholog is 100%.
Bootstrap support for A8J7E4 as seed ortholog is 99%.

Group of orthologs #330. Best score 362 bits
Score difference with first non-orthologous sequence - A.capsulata:8 C.reinhardtii:75

C0NH76              	100.00%		Q9FXT7              	100.00%
                    	       		A8IKD6              	24.59%
                    	       		A8IKE3              	21.08%
Bootstrap support for C0NH76 as seed ortholog is 41%.
Alternative seed ortholog is C0NML9 (8 bits away from this cluster)
Bootstrap support for Q9FXT7 as seed ortholog is 97%.

Group of orthologs #331. Best score 362 bits
Score difference with first non-orthologous sequence - A.capsulata:31 C.reinhardtii:34

C0NSA0              	100.00%		A8I1P3              	100.00%
Bootstrap support for C0NSA0 as seed ortholog is 81%.
Bootstrap support for A8I1P3 as seed ortholog is 82%.

Group of orthologs #332. Best score 361 bits
Score difference with first non-orthologous sequence - A.capsulata:361 C.reinhardtii:361

C0NU30              	100.00%		A8HQF0              	100.00%
Bootstrap support for C0NU30 as seed ortholog is 100%.
Bootstrap support for A8HQF0 as seed ortholog is 100%.

Group of orthologs #333. Best score 361 bits
Score difference with first non-orthologous sequence - A.capsulata:361 C.reinhardtii:361

C0NXR7              	100.00%		A8HQI5              	100.00%
Bootstrap support for C0NXR7 as seed ortholog is 100%.
Bootstrap support for A8HQI5 as seed ortholog is 100%.

Group of orthologs #334. Best score 361 bits
Score difference with first non-orthologous sequence - A.capsulata:125 C.reinhardtii:205

C0NKW4              	100.00%		A8J240              	100.00%
Bootstrap support for C0NKW4 as seed ortholog is 99%.
Bootstrap support for A8J240 as seed ortholog is 99%.

Group of orthologs #335. Best score 361 bits
Score difference with first non-orthologous sequence - A.capsulata:361 C.reinhardtii:119

C0NJB1              	100.00%		A8JC04              	100.00%
Bootstrap support for C0NJB1 as seed ortholog is 100%.
Bootstrap support for A8JC04 as seed ortholog is 99%.

Group of orthologs #336. Best score 361 bits
Score difference with first non-orthologous sequence - A.capsulata:221 C.reinhardtii:305

C0NPB1              	100.00%		A8JDN9              	100.00%
Bootstrap support for C0NPB1 as seed ortholog is 99%.
Bootstrap support for A8JDN9 as seed ortholog is 100%.

Group of orthologs #337. Best score 359 bits
Score difference with first non-orthologous sequence - A.capsulata:359 C.reinhardtii:359

C0NFB0              	100.00%		A8I0M0              	100.00%
Bootstrap support for C0NFB0 as seed ortholog is 100%.
Bootstrap support for A8I0M0 as seed ortholog is 100%.

Group of orthologs #338. Best score 359 bits
Score difference with first non-orthologous sequence - A.capsulata:17 C.reinhardtii:359

C0NTE0              	100.00%		A8JG41              	100.00%
Bootstrap support for C0NTE0 as seed ortholog is 64%.
Alternative seed ortholog is C0NWB0 (17 bits away from this cluster)
Bootstrap support for A8JG41 as seed ortholog is 100%.

Group of orthologs #339. Best score 358 bits
Score difference with first non-orthologous sequence - A.capsulata:176 C.reinhardtii:193

C0NQH7              	100.00%		A8HQS1              	100.00%
Bootstrap support for C0NQH7 as seed ortholog is 99%.
Bootstrap support for A8HQS1 as seed ortholog is 99%.

Group of orthologs #340. Best score 358 bits
Score difference with first non-orthologous sequence - A.capsulata:250 C.reinhardtii:358

C0NPP2              	100.00%		A8IB70              	100.00%
Bootstrap support for C0NPP2 as seed ortholog is 99%.
Bootstrap support for A8IB70 as seed ortholog is 100%.

Group of orthologs #341. Best score 358 bits
Score difference with first non-orthologous sequence - A.capsulata:358 C.reinhardtii:358

C0NQK6              	100.00%		A8IFG0              	100.00%
Bootstrap support for C0NQK6 as seed ortholog is 100%.
Bootstrap support for A8IFG0 as seed ortholog is 100%.

Group of orthologs #342. Best score 358 bits
Score difference with first non-orthologous sequence - A.capsulata:358 C.reinhardtii:358

C0NCZ8              	100.00%		A8J4I7              	100.00%
Bootstrap support for C0NCZ8 as seed ortholog is 100%.
Bootstrap support for A8J4I7 as seed ortholog is 100%.

Group of orthologs #343. Best score 356 bits
Score difference with first non-orthologous sequence - A.capsulata:217 C.reinhardtii:136

C0ND75              	100.00%		A8J5F6              	100.00%
Bootstrap support for C0ND75 as seed ortholog is 100%.
Bootstrap support for A8J5F6 as seed ortholog is 99%.

Group of orthologs #344. Best score 356 bits
Score difference with first non-orthologous sequence - A.capsulata:356 C.reinhardtii:356

C0NWB8              	100.00%		A8J4X2              	100.00%
Bootstrap support for C0NWB8 as seed ortholog is 100%.
Bootstrap support for A8J4X2 as seed ortholog is 100%.

Group of orthologs #345. Best score 355 bits
Score difference with first non-orthologous sequence - A.capsulata:355 C.reinhardtii:355

C0NF54              	100.00%		A8I274              	100.00%
Bootstrap support for C0NF54 as seed ortholog is 100%.
Bootstrap support for A8I274 as seed ortholog is 100%.

Group of orthologs #346. Best score 353 bits
Score difference with first non-orthologous sequence - A.capsulata:120 C.reinhardtii:168

C0NV42              	100.00%		A8IEF3              	100.00%
Bootstrap support for C0NV42 as seed ortholog is 99%.
Bootstrap support for A8IEF3 as seed ortholog is 100%.

Group of orthologs #347. Best score 353 bits
Score difference with first non-orthologous sequence - A.capsulata:353 C.reinhardtii:353

C0NT40              	100.00%		A8JG39              	100.00%
Bootstrap support for C0NT40 as seed ortholog is 100%.
Bootstrap support for A8JG39 as seed ortholog is 100%.

Group of orthologs #348. Best score 353 bits
Score difference with first non-orthologous sequence - A.capsulata:353 C.reinhardtii:10

C0NXP6              	100.00%		A8JGF7              	100.00%
Bootstrap support for C0NXP6 as seed ortholog is 100%.
Bootstrap support for A8JGF7 as seed ortholog is 59%.
Alternative seed ortholog is A8I2V9 (10 bits away from this cluster)

Group of orthologs #349. Best score 352 bits
Score difference with first non-orthologous sequence - A.capsulata:352 C.reinhardtii:352

C0NI53              	100.00%		A8I988              	100.00%
Bootstrap support for C0NI53 as seed ortholog is 100%.
Bootstrap support for A8I988 as seed ortholog is 100%.

Group of orthologs #350. Best score 351 bits
Score difference with first non-orthologous sequence - A.capsulata:351 C.reinhardtii:351

C0NWL5              	100.00%		A8J0K7              	100.00%
Bootstrap support for C0NWL5 as seed ortholog is 100%.
Bootstrap support for A8J0K7 as seed ortholog is 100%.

Group of orthologs #351. Best score 350 bits
Score difference with first non-orthologous sequence - A.capsulata:350 C.reinhardtii:350

C0NZM2              	100.00%		A8J5W3              	100.00%
Bootstrap support for C0NZM2 as seed ortholog is 100%.
Bootstrap support for A8J5W3 as seed ortholog is 100%.

Group of orthologs #352. Best score 349 bits
Score difference with first non-orthologous sequence - A.capsulata:349 C.reinhardtii:349

C0NFI6              	100.00%		A8JD25              	100.00%
Bootstrap support for C0NFI6 as seed ortholog is 100%.
Bootstrap support for A8JD25 as seed ortholog is 100%.

Group of orthologs #353. Best score 348 bits
Score difference with first non-orthologous sequence - A.capsulata:348 C.reinhardtii:348

C0NFU6              	100.00%		A8HM54              	100.00%
Bootstrap support for C0NFU6 as seed ortholog is 100%.
Bootstrap support for A8HM54 as seed ortholog is 100%.

Group of orthologs #354. Best score 348 bits
Score difference with first non-orthologous sequence - A.capsulata:348 C.reinhardtii:348

C0NX78              	100.00%		A8J1S8              	100.00%
Bootstrap support for C0NX78 as seed ortholog is 100%.
Bootstrap support for A8J1S8 as seed ortholog is 100%.

Group of orthologs #355. Best score 347 bits
Score difference with first non-orthologous sequence - A.capsulata:258 C.reinhardtii:347

C0NDX5              	100.00%		A8JA80              	100.00%
Bootstrap support for C0NDX5 as seed ortholog is 100%.
Bootstrap support for A8JA80 as seed ortholog is 100%.

Group of orthologs #356. Best score 347 bits
Score difference with first non-orthologous sequence - A.capsulata:43 C.reinhardtii:178

C0NND7              	100.00%		A8J7X9              	100.00%
Bootstrap support for C0NND7 as seed ortholog is 89%.
Bootstrap support for A8J7X9 as seed ortholog is 99%.

Group of orthologs #357. Best score 347 bits
Score difference with first non-orthologous sequence - A.capsulata:347 C.reinhardtii:130

C0NYD8              	100.00%		Q9S7V1              	100.00%
Bootstrap support for C0NYD8 as seed ortholog is 100%.
Bootstrap support for Q9S7V1 as seed ortholog is 99%.

Group of orthologs #358. Best score 346 bits
Score difference with first non-orthologous sequence - A.capsulata:346 C.reinhardtii:58

C0NBG1              	100.00%		A8JGV6              	100.00%
C0NAA6              	17.42%		
Bootstrap support for C0NBG1 as seed ortholog is 100%.
Bootstrap support for A8JGV6 as seed ortholog is 99%.

Group of orthologs #359. Best score 346 bits
Score difference with first non-orthologous sequence - A.capsulata:346 C.reinhardtii:346

C0NR03              	100.00%		A8IVK1              	100.00%
Bootstrap support for C0NR03 as seed ortholog is 100%.
Bootstrap support for A8IVK1 as seed ortholog is 100%.

Group of orthologs #360. Best score 346 bits
Score difference with first non-orthologous sequence - A.capsulata:67 C.reinhardtii:156

C0NVJ3              	100.00%		A8JB47              	100.00%
Bootstrap support for C0NVJ3 as seed ortholog is 96%.
Bootstrap support for A8JB47 as seed ortholog is 99%.

Group of orthologs #361. Best score 343 bits
Score difference with first non-orthologous sequence - A.capsulata:343 C.reinhardtii:121

C0NUV0              	100.00%		A8HXH6              	100.00%
Bootstrap support for C0NUV0 as seed ortholog is 100%.
Bootstrap support for A8HXH6 as seed ortholog is 98%.

Group of orthologs #362. Best score 342 bits
Score difference with first non-orthologous sequence - A.capsulata:342 C.reinhardtii:188

C0NLI8              	100.00%		A8II74              	100.00%
Bootstrap support for C0NLI8 as seed ortholog is 100%.
Bootstrap support for A8II74 as seed ortholog is 99%.

Group of orthologs #363. Best score 342 bits
Score difference with first non-orthologous sequence - A.capsulata:342 C.reinhardtii:100

P40911              	100.00%		A8HX38              	100.00%
Bootstrap support for P40911 as seed ortholog is 100%.
Bootstrap support for A8HX38 as seed ortholog is 98%.

Group of orthologs #364. Best score 341 bits
Score difference with first non-orthologous sequence - A.capsulata:341 C.reinhardtii:71

C0NLY4              	100.00%		A8IG50              	100.00%
Bootstrap support for C0NLY4 as seed ortholog is 100%.
Bootstrap support for A8IG50 as seed ortholog is 93%.

Group of orthologs #365. Best score 341 bits
Score difference with first non-orthologous sequence - A.capsulata:341 C.reinhardtii:341

C0NUK3              	100.00%		A8HYQ1              	100.00%
Bootstrap support for C0NUK3 as seed ortholog is 100%.
Bootstrap support for A8HYQ1 as seed ortholog is 100%.

Group of orthologs #366. Best score 340 bits
Score difference with first non-orthologous sequence - A.capsulata:340 C.reinhardtii:340

C0NDT9              	100.00%		A8HUE0              	100.00%
Bootstrap support for C0NDT9 as seed ortholog is 100%.
Bootstrap support for A8HUE0 as seed ortholog is 100%.

Group of orthologs #367. Best score 338 bits
Score difference with first non-orthologous sequence - A.capsulata:240 C.reinhardtii:338

C0NWV2              	100.00%		A8HNP3              	100.00%
Bootstrap support for C0NWV2 as seed ortholog is 100%.
Bootstrap support for A8HNP3 as seed ortholog is 100%.

Group of orthologs #368. Best score 338 bits
Score difference with first non-orthologous sequence - A.capsulata:229 C.reinhardtii:338

C0NU24              	100.00%		A8J1U3              	100.00%
Bootstrap support for C0NU24 as seed ortholog is 99%.
Bootstrap support for A8J1U3 as seed ortholog is 100%.

Group of orthologs #369. Best score 337 bits
Score difference with first non-orthologous sequence - A.capsulata:337 C.reinhardtii:337

C0NPZ2              	100.00%		A8ILL5              	100.00%
Bootstrap support for C0NPZ2 as seed ortholog is 100%.
Bootstrap support for A8ILL5 as seed ortholog is 100%.

Group of orthologs #370. Best score 337 bits
Score difference with first non-orthologous sequence - A.capsulata:151 C.reinhardtii:90

C0NA43              	100.00%		A8J8H3              	100.00%
Bootstrap support for C0NA43 as seed ortholog is 99%.
Bootstrap support for A8J8H3 as seed ortholog is 97%.

Group of orthologs #371. Best score 336 bits
Score difference with first non-orthologous sequence - A.capsulata:336 C.reinhardtii:336

C0NSF3              	100.00%		A8J9T5              	100.00%
Bootstrap support for C0NSF3 as seed ortholog is 100%.
Bootstrap support for A8J9T5 as seed ortholog is 100%.

Group of orthologs #372. Best score 336 bits
Score difference with first non-orthologous sequence - A.capsulata:336 C.reinhardtii:336

C0NVN1              	100.00%		A8JD96              	100.00%
Bootstrap support for C0NVN1 as seed ortholog is 100%.
Bootstrap support for A8JD96 as seed ortholog is 100%.

Group of orthologs #373. Best score 335 bits
Score difference with first non-orthologous sequence - A.capsulata:209 C.reinhardtii:102

C0NPN5              	100.00%		A8HME7              	100.00%
Bootstrap support for C0NPN5 as seed ortholog is 99%.
Bootstrap support for A8HME7 as seed ortholog is 95%.

Group of orthologs #374. Best score 335 bits
Score difference with first non-orthologous sequence - A.capsulata:115 C.reinhardtii:267

C0NAR6              	100.00%		Q84X74              	100.00%
Bootstrap support for C0NAR6 as seed ortholog is 99%.
Bootstrap support for Q84X74 as seed ortholog is 100%.

Group of orthologs #375. Best score 334 bits
Score difference with first non-orthologous sequence - A.capsulata:285 C.reinhardtii:334

C0NBX0              	100.00%		A8HQY5              	100.00%
Bootstrap support for C0NBX0 as seed ortholog is 100%.
Bootstrap support for A8HQY5 as seed ortholog is 100%.

Group of orthologs #376. Best score 334 bits
Score difference with first non-orthologous sequence - A.capsulata:227 C.reinhardtii:171

C0NQE1              	100.00%		A8JD37              	100.00%
Bootstrap support for C0NQE1 as seed ortholog is 99%.
Bootstrap support for A8JD37 as seed ortholog is 99%.

Group of orthologs #377. Best score 334 bits
Score difference with first non-orthologous sequence - A.capsulata:334 C.reinhardtii:334

C0NZT7              	100.00%		A8JCM8              	100.00%
Bootstrap support for C0NZT7 as seed ortholog is 100%.
Bootstrap support for A8JCM8 as seed ortholog is 100%.

Group of orthologs #378. Best score 333 bits
Score difference with first non-orthologous sequence - A.capsulata:15 C.reinhardtii:211

C0P008              	100.00%		A8JH58              	100.00%
C0NX06              	44.80%		A8HRV2              	6.56%
Bootstrap support for C0P008 as seed ortholog is 61%.
Alternative seed ortholog is C0P0B7 (15 bits away from this cluster)
Bootstrap support for A8JH58 as seed ortholog is 100%.

Group of orthologs #379. Best score 333 bits
Score difference with first non-orthologous sequence - A.capsulata:244 C.reinhardtii:333

C0P161              	100.00%		A8HY93              	100.00%
Bootstrap support for C0P161 as seed ortholog is 100%.
Bootstrap support for A8HY93 as seed ortholog is 100%.

Group of orthologs #380. Best score 332 bits
Score difference with first non-orthologous sequence - A.capsulata:332 C.reinhardtii:332

C0NMK7              	100.00%		A8HQJ4              	100.00%
Bootstrap support for C0NMK7 as seed ortholog is 100%.
Bootstrap support for A8HQJ4 as seed ortholog is 100%.

Group of orthologs #381. Best score 332 bits
Score difference with first non-orthologous sequence - A.capsulata:236 C.reinhardtii:220

C0NHE6              	100.00%		A8IRX5              	100.00%
Bootstrap support for C0NHE6 as seed ortholog is 100%.
Bootstrap support for A8IRX5 as seed ortholog is 100%.

Group of orthologs #382. Best score 332 bits
Score difference with first non-orthologous sequence - A.capsulata:332 C.reinhardtii:332

C0NL77              	100.00%		A8J506              	100.00%
Bootstrap support for C0NL77 as seed ortholog is 100%.
Bootstrap support for A8J506 as seed ortholog is 100%.

Group of orthologs #383. Best score 332 bits
Score difference with first non-orthologous sequence - A.capsulata:176 C.reinhardtii:332

C0NWZ0              	100.00%		A8J0X4              	100.00%
Bootstrap support for C0NWZ0 as seed ortholog is 99%.
Bootstrap support for A8J0X4 as seed ortholog is 100%.

Group of orthologs #384. Best score 331 bits
Score difference with first non-orthologous sequence - A.capsulata:80 C.reinhardtii:56

C0NEE9              	100.00%		A8I2H7              	100.00%
Bootstrap support for C0NEE9 as seed ortholog is 92%.
Bootstrap support for A8I2H7 as seed ortholog is 91%.

Group of orthologs #385. Best score 331 bits
Score difference with first non-orthologous sequence - A.capsulata:195 C.reinhardtii:130

C0NU41              	100.00%		A8HYZ5              	100.00%
Bootstrap support for C0NU41 as seed ortholog is 100%.
Bootstrap support for A8HYZ5 as seed ortholog is 99%.

Group of orthologs #386. Best score 331 bits
Score difference with first non-orthologous sequence - A.capsulata:270 C.reinhardtii:331

C0NEZ5              	100.00%		A8J1F4              	100.00%
Bootstrap support for C0NEZ5 as seed ortholog is 100%.
Bootstrap support for A8J1F4 as seed ortholog is 100%.

Group of orthologs #387. Best score 331 bits
Score difference with first non-orthologous sequence - A.capsulata:331 C.reinhardtii:262

C0NGZ5              	100.00%		A8J6M3              	100.00%
Bootstrap support for C0NGZ5 as seed ortholog is 100%.
Bootstrap support for A8J6M3 as seed ortholog is 100%.

Group of orthologs #388. Best score 330 bits
Score difference with first non-orthologous sequence - A.capsulata:283 C.reinhardtii:330

C0NN44              	100.00%		A8HNQ7              	100.00%
Bootstrap support for C0NN44 as seed ortholog is 100%.
Bootstrap support for A8HNQ7 as seed ortholog is 100%.

Group of orthologs #389. Best score 330 bits
Score difference with first non-orthologous sequence - A.capsulata:330 C.reinhardtii:330

C0NVX9              	100.00%		A8HME4              	100.00%
Bootstrap support for C0NVX9 as seed ortholog is 100%.
Bootstrap support for A8HME4 as seed ortholog is 100%.

Group of orthologs #390. Best score 330 bits
Score difference with first non-orthologous sequence - A.capsulata:330 C.reinhardtii:330

C0NUL9              	100.00%		A8JBB2              	100.00%
Bootstrap support for C0NUL9 as seed ortholog is 100%.
Bootstrap support for A8JBB2 as seed ortholog is 100%.

Group of orthologs #391. Best score 329 bits
Score difference with first non-orthologous sequence - A.capsulata:329 C.reinhardtii:329

C0NI46              	100.00%		A8JIP9              	100.00%
Bootstrap support for C0NI46 as seed ortholog is 100%.
Bootstrap support for A8JIP9 as seed ortholog is 100%.

Group of orthologs #392. Best score 328 bits
Score difference with first non-orthologous sequence - A.capsulata:328 C.reinhardtii:328

C0NEA1              	100.00%		A8JFC4              	100.00%
Bootstrap support for C0NEA1 as seed ortholog is 100%.
Bootstrap support for A8JFC4 as seed ortholog is 100%.

Group of orthologs #393. Best score 327 bits
Score difference with first non-orthologous sequence - A.capsulata:327 C.reinhardtii:327

C0NYL1              	100.00%		A8IVR6              	100.00%
                    	       		A8J104              	5.59%
Bootstrap support for C0NYL1 as seed ortholog is 100%.
Bootstrap support for A8IVR6 as seed ortholog is 100%.

Group of orthologs #394. Best score 327 bits
Score difference with first non-orthologous sequence - A.capsulata:327 C.reinhardtii:327

C0NTA4              	100.00%		A8IX41              	100.00%
Bootstrap support for C0NTA4 as seed ortholog is 100%.
Bootstrap support for A8IX41 as seed ortholog is 100%.

Group of orthologs #395. Best score 327 bits
Score difference with first non-orthologous sequence - A.capsulata:327 C.reinhardtii:235

C0NXU1              	100.00%		A8J2Z9              	100.00%
Bootstrap support for C0NXU1 as seed ortholog is 100%.
Bootstrap support for A8J2Z9 as seed ortholog is 100%.

Group of orthologs #396. Best score 326 bits
Score difference with first non-orthologous sequence - A.capsulata:199 C.reinhardtii:166

C0NTS2              	100.00%		A8I768              	100.00%
Bootstrap support for C0NTS2 as seed ortholog is 99%.
Bootstrap support for A8I768 as seed ortholog is 99%.

Group of orthologs #397. Best score 326 bits
Score difference with first non-orthologous sequence - A.capsulata:326 C.reinhardtii:326

C0NQ24              	100.00%		A8IWK3              	100.00%
Bootstrap support for C0NQ24 as seed ortholog is 100%.
Bootstrap support for A8IWK3 as seed ortholog is 100%.

Group of orthologs #398. Best score 325 bits
Score difference with first non-orthologous sequence - A.capsulata:158 C.reinhardtii:325

C0NIB7              	100.00%		A8ITU7              	100.00%
Bootstrap support for C0NIB7 as seed ortholog is 99%.
Bootstrap support for A8ITU7 as seed ortholog is 100%.

Group of orthologs #399. Best score 325 bits
Score difference with first non-orthologous sequence - A.capsulata:325 C.reinhardtii:325

C0NXS3              	100.00%		A8HVA6              	100.00%
Bootstrap support for C0NXS3 as seed ortholog is 100%.
Bootstrap support for A8HVA6 as seed ortholog is 100%.

Group of orthologs #400. Best score 324 bits
Score difference with first non-orthologous sequence - A.capsulata:119 C.reinhardtii:324

C0NDG1              	100.00%		A8JAE8              	100.00%
                    	       		A8J9E5              	31.20%
Bootstrap support for C0NDG1 as seed ortholog is 99%.
Bootstrap support for A8JAE8 as seed ortholog is 100%.

Group of orthologs #401. Best score 324 bits
Score difference with first non-orthologous sequence - A.capsulata:235 C.reinhardtii:201

C0NB15              	100.00%		A8HY75              	100.00%
Bootstrap support for C0NB15 as seed ortholog is 100%.
Bootstrap support for A8HY75 as seed ortholog is 100%.

Group of orthologs #402. Best score 324 bits
Score difference with first non-orthologous sequence - A.capsulata:324 C.reinhardtii:324

C0NUD0              	100.00%		A8I4P5              	100.00%
Bootstrap support for C0NUD0 as seed ortholog is 100%.
Bootstrap support for A8I4P5 as seed ortholog is 100%.

Group of orthologs #403. Best score 324 bits
Score difference with first non-orthologous sequence - A.capsulata:91 C.reinhardtii:108

C0NMG7              	100.00%		A8JAG8              	100.00%
Bootstrap support for C0NMG7 as seed ortholog is 63%.
Alternative seed ortholog is C0NUS8 (91 bits away from this cluster)
Bootstrap support for A8JAG8 as seed ortholog is 84%.

Group of orthologs #404. Best score 324 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.reinhardtii:122

C0NY00              	100.00%		A8JGD2              	100.00%
Bootstrap support for C0NY00 as seed ortholog is 91%.
Bootstrap support for A8JGD2 as seed ortholog is 99%.

Group of orthologs #405. Best score 323 bits
Score difference with first non-orthologous sequence - A.capsulata:323 C.reinhardtii:323

C0NQC7              	100.00%		A8HX04              	100.00%
Bootstrap support for C0NQC7 as seed ortholog is 100%.
Bootstrap support for A8HX04 as seed ortholog is 100%.

Group of orthologs #406. Best score 323 bits
Score difference with first non-orthologous sequence - A.capsulata:323 C.reinhardtii:323

C0P0F6              	100.00%		A8HS48              	100.00%
Bootstrap support for C0P0F6 as seed ortholog is 100%.
Bootstrap support for A8HS48 as seed ortholog is 100%.

Group of orthologs #407. Best score 322 bits
Score difference with first non-orthologous sequence - A.capsulata:279 C.reinhardtii:322

C0NAK8              	100.00%		A8J7S6              	100.00%
Bootstrap support for C0NAK8 as seed ortholog is 100%.
Bootstrap support for A8J7S6 as seed ortholog is 100%.

Group of orthologs #408. Best score 318 bits
Score difference with first non-orthologous sequence - A.capsulata:171 C.reinhardtii:128

C0NDH3              	100.00%		A8J1V5              	100.00%
                    	       		A8HYH4              	16.17%
Bootstrap support for C0NDH3 as seed ortholog is 99%.
Bootstrap support for A8J1V5 as seed ortholog is 99%.

Group of orthologs #409. Best score 317 bits
Score difference with first non-orthologous sequence - A.capsulata:317 C.reinhardtii:271

C0NDH1              	100.00%		A8JHU0              	100.00%
C0P046              	11.11%		P93106              	11.33%
Bootstrap support for C0NDH1 as seed ortholog is 100%.
Bootstrap support for A8JHU0 as seed ortholog is 100%.

Group of orthologs #410. Best score 317 bits
Score difference with first non-orthologous sequence - A.capsulata:317 C.reinhardtii:317

C0NAP1              	100.00%		A8IK52              	100.00%
Bootstrap support for C0NAP1 as seed ortholog is 100%.
Bootstrap support for A8IK52 as seed ortholog is 100%.

Group of orthologs #411. Best score 316 bits
Score difference with first non-orthologous sequence - A.capsulata:66 C.reinhardtii:110

C0NX54              	100.00%		A8JFV3              	100.00%
Bootstrap support for C0NX54 as seed ortholog is 96%.
Bootstrap support for A8JFV3 as seed ortholog is 99%.

Group of orthologs #412. Best score 314 bits
Score difference with first non-orthologous sequence - A.capsulata:314 C.reinhardtii:314

C0NQJ1              	100.00%		A8J9F0              	100.00%
                    	       		A8J5Q2              	48.51%
Bootstrap support for C0NQJ1 as seed ortholog is 100%.
Bootstrap support for A8J9F0 as seed ortholog is 100%.

Group of orthologs #413. Best score 314 bits
Score difference with first non-orthologous sequence - A.capsulata:314 C.reinhardtii:314

C0NCI7              	100.00%		A8HMQ7              	100.00%
Bootstrap support for C0NCI7 as seed ortholog is 100%.
Bootstrap support for A8HMQ7 as seed ortholog is 100%.

Group of orthologs #414. Best score 314 bits
Score difference with first non-orthologous sequence - A.capsulata:314 C.reinhardtii:314

C0NHJ7              	100.00%		A8HTR3              	100.00%
Bootstrap support for C0NHJ7 as seed ortholog is 100%.
Bootstrap support for A8HTR3 as seed ortholog is 100%.

Group of orthologs #415. Best score 313 bits
Score difference with first non-orthologous sequence - A.capsulata:313 C.reinhardtii:313

C0NF45              	100.00%		A8IDY0              	100.00%
Bootstrap support for C0NF45 as seed ortholog is 100%.
Bootstrap support for A8IDY0 as seed ortholog is 100%.

Group of orthologs #416. Best score 313 bits
Score difference with first non-orthologous sequence - A.capsulata:313 C.reinhardtii:232

C0NYE5              	100.00%		A8J8V5              	100.00%
Bootstrap support for C0NYE5 as seed ortholog is 100%.
Bootstrap support for A8J8V5 as seed ortholog is 100%.

Group of orthologs #417. Best score 311 bits
Score difference with first non-orthologous sequence - A.capsulata:48 C.reinhardtii:56

C0NWY8              	100.00%		A8JFG3              	100.00%
                    	       		A7LGV1              	28.26%
Bootstrap support for C0NWY8 as seed ortholog is 90%.
Bootstrap support for A8JFG3 as seed ortholog is 87%.

Group of orthologs #418. Best score 311 bits
Score difference with first non-orthologous sequence - A.capsulata:311 C.reinhardtii:311

C0NZB7              	100.00%		A8I5X1              	100.00%
Bootstrap support for C0NZB7 as seed ortholog is 100%.
Bootstrap support for A8I5X1 as seed ortholog is 100%.

Group of orthologs #419. Best score 311 bits
Score difference with first non-orthologous sequence - A.capsulata:222 C.reinhardtii:240

C0NJH7              	100.00%		A8JI52              	100.00%
Bootstrap support for C0NJH7 as seed ortholog is 100%.
Bootstrap support for A8JI52 as seed ortholog is 100%.

Group of orthologs #420. Best score 310 bits
Score difference with first non-orthologous sequence - A.capsulata:310 C.reinhardtii:310

C0NAY2              	100.00%		A8IAS5              	100.00%
C0NLP1              	21.50%		
Bootstrap support for C0NAY2 as seed ortholog is 100%.
Bootstrap support for A8IAS5 as seed ortholog is 100%.

Group of orthologs #421. Best score 309 bits
Score difference with first non-orthologous sequence - A.capsulata:309 C.reinhardtii:309

C0NCN3              	100.00%		A8I8V6              	100.00%
Bootstrap support for C0NCN3 as seed ortholog is 100%.
Bootstrap support for A8I8V6 as seed ortholog is 100%.

Group of orthologs #422. Best score 309 bits
Score difference with first non-orthologous sequence - A.capsulata:309 C.reinhardtii:309

C0NHZ2              	100.00%		A8J633              	100.00%
Bootstrap support for C0NHZ2 as seed ortholog is 100%.
Bootstrap support for A8J633 as seed ortholog is 100%.

Group of orthologs #423. Best score 309 bits
Score difference with first non-orthologous sequence - A.capsulata:309 C.reinhardtii:267

C0NLB3              	100.00%		A8J6K9              	100.00%
Bootstrap support for C0NLB3 as seed ortholog is 100%.
Bootstrap support for A8J6K9 as seed ortholog is 100%.

Group of orthologs #424. Best score 309 bits
Score difference with first non-orthologous sequence - A.capsulata:309 C.reinhardtii:309

C0NBQ4              	100.00%		A8JHW6              	100.00%
Bootstrap support for C0NBQ4 as seed ortholog is 100%.
Bootstrap support for A8JHW6 as seed ortholog is 100%.

Group of orthologs #425. Best score 309 bits
Score difference with first non-orthologous sequence - A.capsulata:166 C.reinhardtii:125

C0P0C9              	100.00%		A8JHQ7              	100.00%
Bootstrap support for C0P0C9 as seed ortholog is 100%.
Bootstrap support for A8JHQ7 as seed ortholog is 100%.

Group of orthologs #426. Best score 308 bits
Score difference with first non-orthologous sequence - A.capsulata:308 C.reinhardtii:308

C0ND21              	100.00%		A8J3U8              	100.00%
Bootstrap support for C0ND21 as seed ortholog is 100%.
Bootstrap support for A8J3U8 as seed ortholog is 100%.

Group of orthologs #427. Best score 308 bits
Score difference with first non-orthologous sequence - A.capsulata:193 C.reinhardtii:145

C0NME1              	100.00%		A8ISU1              	100.00%
Bootstrap support for C0NME1 as seed ortholog is 100%.
Bootstrap support for A8ISU1 as seed ortholog is 99%.

Group of orthologs #428. Best score 307 bits
Score difference with first non-orthologous sequence - A.capsulata:307 C.reinhardtii:307

C0NZE4              	100.00%		A8HN48              	100.00%
Bootstrap support for C0NZE4 as seed ortholog is 100%.
Bootstrap support for A8HN48 as seed ortholog is 100%.

Group of orthologs #429. Best score 307 bits
Score difference with first non-orthologous sequence - A.capsulata:307 C.reinhardtii:307

C0NJL9              	100.00%		A8J4X1              	100.00%
Bootstrap support for C0NJL9 as seed ortholog is 100%.
Bootstrap support for A8J4X1 as seed ortholog is 100%.

Group of orthologs #430. Best score 305 bits
Score difference with first non-orthologous sequence - A.capsulata:130 C.reinhardtii:305

C0NDB7              	100.00%		A8I520              	100.00%
                    	       		A8J1W3              	20.24%
Bootstrap support for C0NDB7 as seed ortholog is 99%.
Bootstrap support for A8I520 as seed ortholog is 100%.

Group of orthologs #431. Best score 305 bits
Score difference with first non-orthologous sequence - A.capsulata:305 C.reinhardtii:305

C0NAK0              	100.00%		A8HYL2              	100.00%
Bootstrap support for C0NAK0 as seed ortholog is 100%.
Bootstrap support for A8HYL2 as seed ortholog is 100%.

Group of orthologs #432. Best score 305 bits
Score difference with first non-orthologous sequence - A.capsulata:188 C.reinhardtii:305

C0NRW7              	100.00%		A8IYT7              	100.00%
Bootstrap support for C0NRW7 as seed ortholog is 100%.
Bootstrap support for A8IYT7 as seed ortholog is 100%.

Group of orthologs #433. Best score 301 bits
Score difference with first non-orthologous sequence - A.capsulata:301 C.reinhardtii:301

C0NCP4              	100.00%		A8IZK3              	100.00%
Bootstrap support for C0NCP4 as seed ortholog is 100%.
Bootstrap support for A8IZK3 as seed ortholog is 100%.

Group of orthologs #434. Best score 301 bits
Score difference with first non-orthologous sequence - A.capsulata:232 C.reinhardtii:206

C0NIG5              	100.00%		A8JD99              	100.00%
Bootstrap support for C0NIG5 as seed ortholog is 100%.
Bootstrap support for A8JD99 as seed ortholog is 100%.

Group of orthologs #435. Best score 300 bits
Score difference with first non-orthologous sequence - A.capsulata:300 C.reinhardtii:300

C0NT66              	100.00%		A8HQI6              	100.00%
Bootstrap support for C0NT66 as seed ortholog is 100%.
Bootstrap support for A8HQI6 as seed ortholog is 100%.

Group of orthologs #436. Best score 299 bits
Score difference with first non-orthologous sequence - A.capsulata:92 C.reinhardtii:299

C0NST2              	100.00%		A8J629              	100.00%
C0NP40              	11.27%		A8J4L6              	29.61%
Bootstrap support for C0NST2 as seed ortholog is 99%.
Bootstrap support for A8J629 as seed ortholog is 100%.

Group of orthologs #437. Best score 299 bits
Score difference with first non-orthologous sequence - A.capsulata:156 C.reinhardtii:299

C0NAW9              	100.00%		A8JDY3              	100.00%
C0NVD2              	17.74%		
Bootstrap support for C0NAW9 as seed ortholog is 99%.
Bootstrap support for A8JDY3 as seed ortholog is 100%.

Group of orthologs #438. Best score 299 bits
Score difference with first non-orthologous sequence - A.capsulata:299 C.reinhardtii:299

C0NJP2              	100.00%		A8HWK6              	100.00%
Bootstrap support for C0NJP2 as seed ortholog is 100%.
Bootstrap support for A8HWK6 as seed ortholog is 100%.

Group of orthologs #439. Best score 299 bits
Score difference with first non-orthologous sequence - A.capsulata:299 C.reinhardtii:299

C0NCT1              	100.00%		A8IWJ1              	100.00%
Bootstrap support for C0NCT1 as seed ortholog is 100%.
Bootstrap support for A8IWJ1 as seed ortholog is 100%.

Group of orthologs #440. Best score 299 bits
Score difference with first non-orthologous sequence - A.capsulata:175 C.reinhardtii:130

C0NDR4              	100.00%		A8IYJ4              	100.00%
Bootstrap support for C0NDR4 as seed ortholog is 99%.
Bootstrap support for A8IYJ4 as seed ortholog is 97%.

Group of orthologs #441. Best score 299 bits
Score difference with first non-orthologous sequence - A.capsulata:299 C.reinhardtii:299

C0NGU1              	100.00%		A8IWA3              	100.00%
Bootstrap support for C0NGU1 as seed ortholog is 100%.
Bootstrap support for A8IWA3 as seed ortholog is 100%.

Group of orthologs #442. Best score 298 bits
Score difference with first non-orthologous sequence - A.capsulata:224 C.reinhardtii:298

C0NB31              	100.00%		A8J760              	100.00%
Bootstrap support for C0NB31 as seed ortholog is 100%.
Bootstrap support for A8J760 as seed ortholog is 100%.

Group of orthologs #443. Best score 297 bits
Score difference with first non-orthologous sequence - A.capsulata:297 C.reinhardtii:169

C0NCI6              	100.00%		A8IL38              	100.00%
Bootstrap support for C0NCI6 as seed ortholog is 100%.
Bootstrap support for A8IL38 as seed ortholog is 99%.

Group of orthologs #444. Best score 297 bits
Score difference with first non-orthologous sequence - A.capsulata:225 C.reinhardtii:297

C0NMR6              	100.00%		A8HT40              	100.00%
Bootstrap support for C0NMR6 as seed ortholog is 99%.
Bootstrap support for A8HT40 as seed ortholog is 100%.

Group of orthologs #445. Best score 297 bits
Score difference with first non-orthologous sequence - A.capsulata:297 C.reinhardtii:186

C0NI03              	100.00%		A8JGX0              	100.00%
Bootstrap support for C0NI03 as seed ortholog is 100%.
Bootstrap support for A8JGX0 as seed ortholog is 100%.

Group of orthologs #446. Best score 296 bits
Score difference with first non-orthologous sequence - A.capsulata:296 C.reinhardtii:296

C0NMM3              	100.00%		A8J244              	100.00%
C0NHP7              	24.05%		
Bootstrap support for C0NMM3 as seed ortholog is 100%.
Bootstrap support for A8J244 as seed ortholog is 100%.

Group of orthologs #447. Best score 296 bits
Score difference with first non-orthologous sequence - A.capsulata:296 C.reinhardtii:296

C0NEL8              	100.00%		A8I901              	100.00%
Bootstrap support for C0NEL8 as seed ortholog is 100%.
Bootstrap support for A8I901 as seed ortholog is 100%.

Group of orthologs #448. Best score 296 bits
Score difference with first non-orthologous sequence - A.capsulata:296 C.reinhardtii:252

C0NF40              	100.00%		A8J2I5              	100.00%
Bootstrap support for C0NF40 as seed ortholog is 100%.
Bootstrap support for A8J2I5 as seed ortholog is 100%.

Group of orthologs #449. Best score 296 bits
Score difference with first non-orthologous sequence - A.capsulata:184 C.reinhardtii:152

C0NI39              	100.00%		A8J2Y5              	100.00%
Bootstrap support for C0NI39 as seed ortholog is 100%.
Bootstrap support for A8J2Y5 as seed ortholog is 98%.

Group of orthologs #450. Best score 296 bits
Score difference with first non-orthologous sequence - A.capsulata:296 C.reinhardtii:296

C0NFG9              	100.00%		A8JB14              	100.00%
Bootstrap support for C0NFG9 as seed ortholog is 100%.
Bootstrap support for A8JB14 as seed ortholog is 100%.

Group of orthologs #451. Best score 296 bits
Score difference with first non-orthologous sequence - A.capsulata:296 C.reinhardtii:296

C0NRM3              	100.00%		A8J5E0              	100.00%
Bootstrap support for C0NRM3 as seed ortholog is 100%.
Bootstrap support for A8J5E0 as seed ortholog is 100%.

Group of orthologs #452. Best score 295 bits
Score difference with first non-orthologous sequence - A.capsulata:295 C.reinhardtii:295

C0NL23              	100.00%		A8IDH5              	100.00%
Bootstrap support for C0NL23 as seed ortholog is 100%.
Bootstrap support for A8IDH5 as seed ortholog is 100%.

Group of orthologs #453. Best score 295 bits
Score difference with first non-orthologous sequence - A.capsulata:295 C.reinhardtii:295

C0NXA5              	100.00%		A8IVE2              	100.00%
Bootstrap support for C0NXA5 as seed ortholog is 100%.
Bootstrap support for A8IVE2 as seed ortholog is 100%.

Group of orthologs #454. Best score 294 bits
Score difference with first non-orthologous sequence - A.capsulata:294 C.reinhardtii:111

C0NKL1              	100.00%		A8IR24              	100.00%
Bootstrap support for C0NKL1 as seed ortholog is 100%.
Bootstrap support for A8IR24 as seed ortholog is 99%.

Group of orthologs #455. Best score 294 bits
Score difference with first non-orthologous sequence - A.capsulata:203 C.reinhardtii:294

C0NZ25              	100.00%		A8HQB6              	100.00%
Bootstrap support for C0NZ25 as seed ortholog is 99%.
Bootstrap support for A8HQB6 as seed ortholog is 100%.

Group of orthologs #456. Best score 294 bits
Score difference with first non-orthologous sequence - A.capsulata:294 C.reinhardtii:294

C0NY87              	100.00%		A8IRL9              	100.00%
Bootstrap support for C0NY87 as seed ortholog is 100%.
Bootstrap support for A8IRL9 as seed ortholog is 100%.

Group of orthologs #457. Best score 292 bits
Score difference with first non-orthologous sequence - A.capsulata:247 C.reinhardtii:234

C0NQQ9              	100.00%		A8J980              	100.00%
Bootstrap support for C0NQQ9 as seed ortholog is 100%.
Bootstrap support for A8J980 as seed ortholog is 100%.

Group of orthologs #458. Best score 290 bits
Score difference with first non-orthologous sequence - A.capsulata:290 C.reinhardtii:290

C0NQN2              	100.00%		A8HTE5              	100.00%
C0NYJ3              	41.79%		
Bootstrap support for C0NQN2 as seed ortholog is 100%.
Bootstrap support for A8HTE5 as seed ortholog is 100%.

Group of orthologs #459. Best score 290 bits
Score difference with first non-orthologous sequence - A.capsulata:33 C.reinhardtii:38

C0NXM2              	100.00%		A8IVZ2              	100.00%
                    	       		A8IHK0              	67.36%
Bootstrap support for C0NXM2 as seed ortholog is 80%.
Bootstrap support for A8IVZ2 as seed ortholog is 80%.

Group of orthologs #460. Best score 290 bits
Score difference with first non-orthologous sequence - A.capsulata:290 C.reinhardtii:176

C0NTZ0              	100.00%		A8HQP0              	100.00%
Bootstrap support for C0NTZ0 as seed ortholog is 100%.
Bootstrap support for A8HQP0 as seed ortholog is 100%.

Group of orthologs #461. Best score 290 bits
Score difference with first non-orthologous sequence - A.capsulata:290 C.reinhardtii:290

C0NZD5              	100.00%		A8HPD2              	100.00%
Bootstrap support for C0NZD5 as seed ortholog is 100%.
Bootstrap support for A8HPD2 as seed ortholog is 100%.

Group of orthologs #462. Best score 290 bits
Score difference with first non-orthologous sequence - A.capsulata:290 C.reinhardtii:290

C0NDY9              	100.00%		A8J825              	100.00%
Bootstrap support for C0NDY9 as seed ortholog is 100%.
Bootstrap support for A8J825 as seed ortholog is 100%.

Group of orthologs #463. Best score 290 bits
Score difference with first non-orthologous sequence - A.capsulata:127 C.reinhardtii:101

C0P083              	100.00%		A8IRT2              	100.00%
Bootstrap support for C0P083 as seed ortholog is 100%.
Bootstrap support for A8IRT2 as seed ortholog is 99%.

Group of orthologs #464. Best score 289 bits
Score difference with first non-orthologous sequence - A.capsulata:289 C.reinhardtii:289

C0NP86              	100.00%		A8J386              	100.00%
                    	       		A8HUP5              	7.20%
Bootstrap support for C0NP86 as seed ortholog is 100%.
Bootstrap support for A8J386 as seed ortholog is 100%.

Group of orthologs #465. Best score 289 bits
Score difference with first non-orthologous sequence - A.capsulata:289 C.reinhardtii:289

C0NU89              	100.00%		A8J982              	100.00%
                    	       		A8J988              	36.50%
Bootstrap support for C0NU89 as seed ortholog is 100%.
Bootstrap support for A8J982 as seed ortholog is 100%.

Group of orthologs #466. Best score 289 bits
Score difference with first non-orthologous sequence - A.capsulata:289 C.reinhardtii:289

C0NFU1              	100.00%		A8J7D9              	100.00%
Bootstrap support for C0NFU1 as seed ortholog is 100%.
Bootstrap support for A8J7D9 as seed ortholog is 100%.

Group of orthologs #467. Best score 289 bits
Score difference with first non-orthologous sequence - A.capsulata:289 C.reinhardtii:289

C0NMF7              	100.00%		A8J2W0              	100.00%
Bootstrap support for C0NMF7 as seed ortholog is 100%.
Bootstrap support for A8J2W0 as seed ortholog is 100%.

Group of orthologs #468. Best score 289 bits
Score difference with first non-orthologous sequence - A.capsulata:131 C.reinhardtii:160

C0NYZ7              	100.00%		A8IIN4              	100.00%
Bootstrap support for C0NYZ7 as seed ortholog is 99%.
Bootstrap support for A8IIN4 as seed ortholog is 99%.

Group of orthologs #469. Best score 288 bits
Score difference with first non-orthologous sequence - A.capsulata:288 C.reinhardtii:288

C0NCG1              	100.00%		A8I982              	100.00%
Bootstrap support for C0NCG1 as seed ortholog is 100%.
Bootstrap support for A8I982 as seed ortholog is 100%.

Group of orthologs #470. Best score 288 bits
Score difference with first non-orthologous sequence - A.capsulata:288 C.reinhardtii:288

C0NER3              	100.00%		A8IAX2              	100.00%
Bootstrap support for C0NER3 as seed ortholog is 100%.
Bootstrap support for A8IAX2 as seed ortholog is 100%.

Group of orthologs #471. Best score 288 bits
Score difference with first non-orthologous sequence - A.capsulata:288 C.reinhardtii:288

C0NCU7              	100.00%		A8IYH8              	100.00%
Bootstrap support for C0NCU7 as seed ortholog is 100%.
Bootstrap support for A8IYH8 as seed ortholog is 100%.

Group of orthologs #472. Best score 288 bits
Score difference with first non-orthologous sequence - A.capsulata:288 C.reinhardtii:288

C0NW35              	100.00%		A8ITM6              	100.00%
Bootstrap support for C0NW35 as seed ortholog is 100%.
Bootstrap support for A8ITM6 as seed ortholog is 100%.

Group of orthologs #473. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:287 C.reinhardtii:206

C0NUJ2              	100.00%		A8J7E8              	100.00%
                    	       		A8JA94              	48.28%
Bootstrap support for C0NUJ2 as seed ortholog is 100%.
Bootstrap support for A8J7E8 as seed ortholog is 100%.

Group of orthologs #474. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:287 C.reinhardtii:188

C0NHS3              	100.00%		A8IIJ6              	100.00%
Bootstrap support for C0NHS3 as seed ortholog is 100%.
Bootstrap support for A8IIJ6 as seed ortholog is 100%.

Group of orthologs #475. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:287 C.reinhardtii:198

C0NQL4              	100.00%		A8I7S0              	100.00%
Bootstrap support for C0NQL4 as seed ortholog is 100%.
Bootstrap support for A8I7S0 as seed ortholog is 99%.

Group of orthologs #476. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:53 C.reinhardtii:97

C0NE89              	100.00%		A8IYY0              	100.00%
Bootstrap support for C0NE89 as seed ortholog is 89%.
Bootstrap support for A8IYY0 as seed ortholog is 97%.

Group of orthologs #477. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:287 C.reinhardtii:287

C0NV64              	100.00%		A8IJX8              	100.00%
Bootstrap support for C0NV64 as seed ortholog is 100%.
Bootstrap support for A8IJX8 as seed ortholog is 100%.

Group of orthologs #478. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:287 C.reinhardtii:188

C0NRI0              	100.00%		A8J6P3              	100.00%
Bootstrap support for C0NRI0 as seed ortholog is 100%.
Bootstrap support for A8J6P3 as seed ortholog is 100%.

Group of orthologs #479. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:287 C.reinhardtii:99

C0NP68              	100.00%		A8J9S9              	100.00%
Bootstrap support for C0NP68 as seed ortholog is 100%.
Bootstrap support for A8J9S9 as seed ortholog is 99%.

Group of orthologs #480. Best score 286 bits
Score difference with first non-orthologous sequence - A.capsulata:286 C.reinhardtii:286

C0NVG7              	100.00%		Q6DN05              	100.00%
Bootstrap support for C0NVG7 as seed ortholog is 100%.
Bootstrap support for Q6DN05 as seed ortholog is 100%.

Group of orthologs #481. Best score 285 bits
Score difference with first non-orthologous sequence - A.capsulata:285 C.reinhardtii:285

C0P017              	100.00%		A8HR57              	100.00%
Bootstrap support for C0P017 as seed ortholog is 100%.
Bootstrap support for A8HR57 as seed ortholog is 100%.

Group of orthologs #482. Best score 284 bits
Score difference with first non-orthologous sequence - A.capsulata:284 C.reinhardtii:284

C0NEQ5              	100.00%		A8J7N7              	100.00%
Bootstrap support for C0NEQ5 as seed ortholog is 100%.
Bootstrap support for A8J7N7 as seed ortholog is 100%.

Group of orthologs #483. Best score 283 bits
Score difference with first non-orthologous sequence - A.capsulata:283 C.reinhardtii:283

C0NJ57              	100.00%		A8IIM2              	100.00%
Bootstrap support for C0NJ57 as seed ortholog is 100%.
Bootstrap support for A8IIM2 as seed ortholog is 100%.

Group of orthologs #484. Best score 282 bits
Score difference with first non-orthologous sequence - A.capsulata:282 C.reinhardtii:282

C0NEK2              	100.00%		A8HY46              	100.00%
C0NN03              	49.11%		
Bootstrap support for C0NEK2 as seed ortholog is 100%.
Bootstrap support for A8HY46 as seed ortholog is 100%.

Group of orthologs #485. Best score 282 bits
Score difference with first non-orthologous sequence - A.capsulata:138 C.reinhardtii:194

C0NEM8              	100.00%		A8I7N8              	100.00%
C0NYY5              	14.42%		
Bootstrap support for C0NEM8 as seed ortholog is 99%.
Bootstrap support for A8I7N8 as seed ortholog is 100%.

Group of orthologs #486. Best score 282 bits
Score difference with first non-orthologous sequence - A.capsulata:282 C.reinhardtii:282

C0NSS6              	100.00%		A8J7F2              	100.00%
Bootstrap support for C0NSS6 as seed ortholog is 100%.
Bootstrap support for A8J7F2 as seed ortholog is 100%.

Group of orthologs #487. Best score 282 bits
Score difference with first non-orthologous sequence - A.capsulata:189 C.reinhardtii:202

C0NZA8              	100.00%		A8J5L0              	100.00%
Bootstrap support for C0NZA8 as seed ortholog is 99%.
Bootstrap support for A8J5L0 as seed ortholog is 99%.

Group of orthologs #488. Best score 281 bits
Score difference with first non-orthologous sequence - A.capsulata:281 C.reinhardtii:281

C0NLR5              	100.00%		A8JGF8              	100.00%
Bootstrap support for C0NLR5 as seed ortholog is 100%.
Bootstrap support for A8JGF8 as seed ortholog is 100%.

Group of orthologs #489. Best score 280 bits
Score difference with first non-orthologous sequence - A.capsulata:32 C.reinhardtii:100

C0NC93              	100.00%		A8IQC5              	100.00%
Bootstrap support for C0NC93 as seed ortholog is 65%.
Alternative seed ortholog is C0NWL8 (32 bits away from this cluster)
Bootstrap support for A8IQC5 as seed ortholog is 98%.

Group of orthologs #490. Best score 280 bits
Score difference with first non-orthologous sequence - A.capsulata:280 C.reinhardtii:280

C0NTA2              	100.00%		A8JAA6              	100.00%
Bootstrap support for C0NTA2 as seed ortholog is 100%.
Bootstrap support for A8JAA6 as seed ortholog is 100%.

Group of orthologs #491. Best score 280 bits
Score difference with first non-orthologous sequence - A.capsulata:57 C.reinhardtii:79

C0NP79              	100.00%		A8JI60              	100.00%
Bootstrap support for C0NP79 as seed ortholog is 90%.
Bootstrap support for A8JI60 as seed ortholog is 95%.

Group of orthologs #492. Best score 280 bits
Score difference with first non-orthologous sequence - A.capsulata:280 C.reinhardtii:280

C0NU20              	100.00%		A8JFD5              	100.00%
Bootstrap support for C0NU20 as seed ortholog is 100%.
Bootstrap support for A8JFD5 as seed ortholog is 100%.

Group of orthologs #493. Best score 279 bits
Score difference with first non-orthologous sequence - A.capsulata:279 C.reinhardtii:279

C0NKW7              	100.00%		A8IB25              	100.00%
Bootstrap support for C0NKW7 as seed ortholog is 100%.
Bootstrap support for A8IB25 as seed ortholog is 100%.

Group of orthologs #494. Best score 279 bits
Score difference with first non-orthologous sequence - A.capsulata:279 C.reinhardtii:279

C0NRR1              	100.00%		A8I523              	100.00%
Bootstrap support for C0NRR1 as seed ortholog is 100%.
Bootstrap support for A8I523 as seed ortholog is 100%.

Group of orthologs #495. Best score 279 bits
Score difference with first non-orthologous sequence - A.capsulata:279 C.reinhardtii:187

C0NQI1              	100.00%		A8IKQ0              	100.00%
Bootstrap support for C0NQI1 as seed ortholog is 100%.
Bootstrap support for A8IKQ0 as seed ortholog is 99%.

Group of orthologs #496. Best score 277 bits
Score difference with first non-orthologous sequence - A.capsulata:21 C.reinhardtii:277

C0NKE4              	100.00%		A8IX13              	100.00%
Bootstrap support for C0NKE4 as seed ortholog is 62%.
Alternative seed ortholog is C0NMS8 (21 bits away from this cluster)
Bootstrap support for A8IX13 as seed ortholog is 100%.

Group of orthologs #497. Best score 277 bits
Score difference with first non-orthologous sequence - A.capsulata:277 C.reinhardtii:277

C0NTA0              	100.00%		A8IP78              	100.00%
Bootstrap support for C0NTA0 as seed ortholog is 100%.
Bootstrap support for A8IP78 as seed ortholog is 100%.

Group of orthologs #498. Best score 276 bits
Score difference with first non-orthologous sequence - A.capsulata:276 C.reinhardtii:125

C0NV23              	100.00%		A8IXB8              	100.00%
Bootstrap support for C0NV23 as seed ortholog is 100%.
Bootstrap support for A8IXB8 as seed ortholog is 99%.

Group of orthologs #499. Best score 275 bits
Score difference with first non-orthologous sequence - A.capsulata:275 C.reinhardtii:7

C0NZN7              	100.00%		A8ILT7              	100.00%
                    	       		A8J399              	14.59%
                    	       		A8J0U2              	8.66%
                    	       		A8J0U4              	8.63%
                    	       		A8J0U0              	7.58%
                    	       		A8J0U1              	7.54%
                    	       		A8JH07              	6.10%
                    	       		Q8LP67              	6.10%
Bootstrap support for C0NZN7 as seed ortholog is 100%.
Bootstrap support for A8ILT7 as seed ortholog is 61%.
Alternative seed ortholog is A8J993 (7 bits away from this cluster)

Group of orthologs #500. Best score 275 bits
Score difference with first non-orthologous sequence - A.capsulata:275 C.reinhardtii:77

C0NH52              	100.00%		A8IS24              	100.00%
Bootstrap support for C0NH52 as seed ortholog is 100%.
Bootstrap support for A8IS24 as seed ortholog is 93%.

Group of orthologs #501. Best score 274 bits
Score difference with first non-orthologous sequence - A.capsulata:274 C.reinhardtii:274

C0NHA4              	100.00%		A8J567              	100.00%
Bootstrap support for C0NHA4 as seed ortholog is 100%.
Bootstrap support for A8J567 as seed ortholog is 100%.

Group of orthologs #502. Best score 274 bits
Score difference with first non-orthologous sequence - A.capsulata:274 C.reinhardtii:274

C0NFD8              	100.00%		A8JGW6              	100.00%
Bootstrap support for C0NFD8 as seed ortholog is 100%.
Bootstrap support for A8JGW6 as seed ortholog is 100%.

Group of orthologs #503. Best score 273 bits
Score difference with first non-orthologous sequence - A.capsulata:273 C.reinhardtii:273

C0NBU6              	100.00%		A8J7F8              	100.00%
Bootstrap support for C0NBU6 as seed ortholog is 100%.
Bootstrap support for A8J7F8 as seed ortholog is 100%.

Group of orthologs #504. Best score 273 bits
Score difference with first non-orthologous sequence - A.capsulata:206 C.reinhardtii:273

C0NDL3              	100.00%		A8J7I3              	100.00%
Bootstrap support for C0NDL3 as seed ortholog is 100%.
Bootstrap support for A8J7I3 as seed ortholog is 100%.

Group of orthologs #505. Best score 272 bits
Score difference with first non-orthologous sequence - A.capsulata:272 C.reinhardtii:190

C0NEL6              	100.00%		A8IY94              	100.00%
Bootstrap support for C0NEL6 as seed ortholog is 100%.
Bootstrap support for A8IY94 as seed ortholog is 100%.

Group of orthologs #506. Best score 272 bits
Score difference with first non-orthologous sequence - A.capsulata:272 C.reinhardtii:272

C0NRU2              	100.00%		A8ID63              	100.00%
Bootstrap support for C0NRU2 as seed ortholog is 100%.
Bootstrap support for A8ID63 as seed ortholog is 100%.

Group of orthologs #507. Best score 272 bits
Score difference with first non-orthologous sequence - A.capsulata:272 C.reinhardtii:272

C0NW02              	100.00%		A8IAM0              	100.00%
Bootstrap support for C0NW02 as seed ortholog is 100%.
Bootstrap support for A8IAM0 as seed ortholog is 100%.

Group of orthologs #508. Best score 272 bits
Score difference with first non-orthologous sequence - A.capsulata:272 C.reinhardtii:272

C0NFS0              	100.00%		A8JCM5              	100.00%
Bootstrap support for C0NFS0 as seed ortholog is 100%.
Bootstrap support for A8JCM5 as seed ortholog is 100%.

Group of orthologs #509. Best score 271 bits
Score difference with first non-orthologous sequence - A.capsulata:271 C.reinhardtii:271

C0NCY2              	100.00%		A8HR70              	100.00%
Bootstrap support for C0NCY2 as seed ortholog is 100%.
Bootstrap support for A8HR70 as seed ortholog is 100%.

Group of orthologs #510. Best score 271 bits
Score difference with first non-orthologous sequence - A.capsulata:271 C.reinhardtii:271

C0NWZ3              	100.00%		A8JHY6              	100.00%
Bootstrap support for C0NWZ3 as seed ortholog is 100%.
Bootstrap support for A8JHY6 as seed ortholog is 100%.

Group of orthologs #511. Best score 270 bits
Score difference with first non-orthologous sequence - A.capsulata:270 C.reinhardtii:270

C0NCW0              	100.00%		A8IAK4              	100.00%
Bootstrap support for C0NCW0 as seed ortholog is 100%.
Bootstrap support for A8IAK4 as seed ortholog is 100%.

Group of orthologs #512. Best score 270 bits
Score difference with first non-orthologous sequence - A.capsulata:270 C.reinhardtii:270

C0NN26              	100.00%		A8HMC0              	100.00%
Bootstrap support for C0NN26 as seed ortholog is 100%.
Bootstrap support for A8HMC0 as seed ortholog is 100%.

Group of orthologs #513. Best score 270 bits
Score difference with first non-orthologous sequence - A.capsulata:219 C.reinhardtii:200

C0NAW2              	100.00%		A8IWL4              	100.00%
Bootstrap support for C0NAW2 as seed ortholog is 100%.
Bootstrap support for A8IWL4 as seed ortholog is 100%.

Group of orthologs #514. Best score 269 bits
Score difference with first non-orthologous sequence - A.capsulata:127 C.reinhardtii:269

C0NZ78              	100.00%		A8IEL8              	100.00%
C0NYB0              	8.71%		
C0NIS8              	8.58%		
Bootstrap support for C0NZ78 as seed ortholog is 99%.
Bootstrap support for A8IEL8 as seed ortholog is 100%.

Group of orthologs #515. Best score 269 bits
Score difference with first non-orthologous sequence - A.capsulata:269 C.reinhardtii:269

C0NB93              	100.00%		A8ITF3              	100.00%
Bootstrap support for C0NB93 as seed ortholog is 100%.
Bootstrap support for A8ITF3 as seed ortholog is 100%.

Group of orthologs #516. Best score 269 bits
Score difference with first non-orthologous sequence - A.capsulata:161 C.reinhardtii:152

C0NFP2              	100.00%		A8ILX2              	100.00%
Bootstrap support for C0NFP2 as seed ortholog is 100%.
Bootstrap support for A8ILX2 as seed ortholog is 100%.

Group of orthologs #517. Best score 269 bits
Score difference with first non-orthologous sequence - A.capsulata:269 C.reinhardtii:269

C0NHM8              	100.00%		A8IS72              	100.00%
Bootstrap support for C0NHM8 as seed ortholog is 100%.
Bootstrap support for A8IS72 as seed ortholog is 100%.

Group of orthologs #518. Best score 269 bits
Score difference with first non-orthologous sequence - A.capsulata:269 C.reinhardtii:269

C0NQY6              	100.00%		A8JDM6              	100.00%
Bootstrap support for C0NQY6 as seed ortholog is 100%.
Bootstrap support for A8JDM6 as seed ortholog is 100%.

Group of orthologs #519. Best score 269 bits
Score difference with first non-orthologous sequence - A.capsulata:113 C.reinhardtii:62

C0NXT7              	100.00%		A8JBJ3              	100.00%
Bootstrap support for C0NXT7 as seed ortholog is 100%.
Bootstrap support for A8JBJ3 as seed ortholog is 99%.

Group of orthologs #520. Best score 267 bits
Score difference with first non-orthologous sequence - A.capsulata:114 C.reinhardtii:267

C0NJ13              	100.00%		A8J8Y2              	100.00%
C0NWP8              	9.01%		
Bootstrap support for C0NJ13 as seed ortholog is 95%.
Bootstrap support for A8J8Y2 as seed ortholog is 100%.

Group of orthologs #521. Best score 267 bits
Score difference with first non-orthologous sequence - A.capsulata:146 C.reinhardtii:121

C0NPH4              	100.00%		A8HN42              	100.00%
Bootstrap support for C0NPH4 as seed ortholog is 100%.
Bootstrap support for A8HN42 as seed ortholog is 100%.

Group of orthologs #522. Best score 267 bits
Score difference with first non-orthologous sequence - A.capsulata:267 C.reinhardtii:267

C0NV29              	100.00%		A8IRE2              	100.00%
Bootstrap support for C0NV29 as seed ortholog is 100%.
Bootstrap support for A8IRE2 as seed ortholog is 100%.

Group of orthologs #523. Best score 267 bits
Score difference with first non-orthologous sequence - A.capsulata:186 C.reinhardtii:191

C0NMQ9              	100.00%		A8JDD2              	100.00%
Bootstrap support for C0NMQ9 as seed ortholog is 100%.
Bootstrap support for A8JDD2 as seed ortholog is 100%.

Group of orthologs #524. Best score 267 bits
Score difference with first non-orthologous sequence - A.capsulata:200 C.reinhardtii:211

C0NL04              	100.00%		A8JFH6              	100.00%
Bootstrap support for C0NL04 as seed ortholog is 100%.
Bootstrap support for A8JFH6 as seed ortholog is 100%.

Group of orthologs #525. Best score 267 bits
Score difference with first non-orthologous sequence - A.capsulata:156 C.reinhardtii:163

C0NU38              	100.00%		A8JBX4              	100.00%
Bootstrap support for C0NU38 as seed ortholog is 99%.
Bootstrap support for A8JBX4 as seed ortholog is 99%.

Group of orthologs #526. Best score 266 bits
Score difference with first non-orthologous sequence - A.capsulata:266 C.reinhardtii:266

C0NHK6              	100.00%		A8J0V5              	100.00%
Bootstrap support for C0NHK6 as seed ortholog is 100%.
Bootstrap support for A8J0V5 as seed ortholog is 100%.

Group of orthologs #527. Best score 266 bits
Score difference with first non-orthologous sequence - A.capsulata:266 C.reinhardtii:87

C0NQL3              	100.00%		A8JII8              	100.00%
Bootstrap support for C0NQL3 as seed ortholog is 100%.
Bootstrap support for A8JII8 as seed ortholog is 96%.

Group of orthologs #528. Best score 265 bits
Score difference with first non-orthologous sequence - A.capsulata:265 C.reinhardtii:265

C0NVD9              	100.00%		A8IQV5              	100.00%
Bootstrap support for C0NVD9 as seed ortholog is 100%.
Bootstrap support for A8IQV5 as seed ortholog is 100%.

Group of orthologs #529. Best score 264 bits
Score difference with first non-orthologous sequence - A.capsulata:264 C.reinhardtii:173

C0NI50              	100.00%		A8HNC2              	100.00%
Bootstrap support for C0NI50 as seed ortholog is 100%.
Bootstrap support for A8HNC2 as seed ortholog is 99%.

Group of orthologs #530. Best score 264 bits
Score difference with first non-orthologous sequence - A.capsulata:264 C.reinhardtii:219

C0NCT8              	100.00%		A8ICB3              	100.00%
Bootstrap support for C0NCT8 as seed ortholog is 100%.
Bootstrap support for A8ICB3 as seed ortholog is 100%.

Group of orthologs #531. Best score 264 bits
Score difference with first non-orthologous sequence - A.capsulata:264 C.reinhardtii:150

C0NHD9              	100.00%		A8IK69              	100.00%
Bootstrap support for C0NHD9 as seed ortholog is 100%.
Bootstrap support for A8IK69 as seed ortholog is 100%.

Group of orthologs #532. Best score 262 bits
Score difference with first non-orthologous sequence - A.capsulata:128 C.reinhardtii:183

C0NI95              	100.00%		A8J3F7              	100.00%
Bootstrap support for C0NI95 as seed ortholog is 99%.
Bootstrap support for A8J3F7 as seed ortholog is 100%.

Group of orthologs #533. Best score 262 bits
Score difference with first non-orthologous sequence - A.capsulata:262 C.reinhardtii:262

C0NS33              	100.00%		A8J7D8              	100.00%
Bootstrap support for C0NS33 as seed ortholog is 100%.
Bootstrap support for A8J7D8 as seed ortholog is 100%.

Group of orthologs #534. Best score 262 bits
Score difference with first non-orthologous sequence - A.capsulata:34 C.reinhardtii:262

C0NMG3              	100.00%		Q6V9B0              	100.00%
Bootstrap support for C0NMG3 as seed ortholog is 95%.
Bootstrap support for Q6V9B0 as seed ortholog is 100%.

Group of orthologs #535. Best score 261 bits
Score difference with first non-orthologous sequence - A.capsulata:207 C.reinhardtii:261

C0NFC7              	100.00%		A8I9S6              	100.00%
Bootstrap support for C0NFC7 as seed ortholog is 100%.
Bootstrap support for A8I9S6 as seed ortholog is 100%.

Group of orthologs #536. Best score 261 bits
Score difference with first non-orthologous sequence - A.capsulata:261 C.reinhardtii:261

C0NPH6              	100.00%		A8HZX4              	100.00%
Bootstrap support for C0NPH6 as seed ortholog is 100%.
Bootstrap support for A8HZX4 as seed ortholog is 100%.

Group of orthologs #537. Best score 261 bits
Score difference with first non-orthologous sequence - A.capsulata:261 C.reinhardtii:261

C0NRR4              	100.00%		A8I7W6              	100.00%
Bootstrap support for C0NRR4 as seed ortholog is 100%.
Bootstrap support for A8I7W6 as seed ortholog is 100%.

Group of orthologs #538. Best score 261 bits
Score difference with first non-orthologous sequence - A.capsulata:261 C.reinhardtii:261

C0NQ87              	100.00%		A8IM30              	100.00%
Bootstrap support for C0NQ87 as seed ortholog is 100%.
Bootstrap support for A8IM30 as seed ortholog is 100%.

Group of orthologs #539. Best score 261 bits
Score difference with first non-orthologous sequence - A.capsulata:261 C.reinhardtii:261

C0NF41              	100.00%		A8JIP6              	100.00%
Bootstrap support for C0NF41 as seed ortholog is 100%.
Bootstrap support for A8JIP6 as seed ortholog is 100%.

Group of orthologs #540. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:89 C.reinhardtii:29

C0ND96              	100.00%		A8JB50              	100.00%
C0P0M5              	5.64%		
Bootstrap support for C0ND96 as seed ortholog is 98%.
Bootstrap support for A8JB50 as seed ortholog is 83%.

Group of orthologs #541. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:102 C.reinhardtii:260

C0NHH1              	100.00%		A8I9K8              	100.00%
Bootstrap support for C0NHH1 as seed ortholog is 97%.
Bootstrap support for A8I9K8 as seed ortholog is 100%.

Group of orthologs #542. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:260 C.reinhardtii:260

C0NAS1              	100.00%		A8J6N3              	100.00%
Bootstrap support for C0NAS1 as seed ortholog is 100%.
Bootstrap support for A8J6N3 as seed ortholog is 100%.

Group of orthologs #543. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:207 C.reinhardtii:260

C0NSR3              	100.00%		A8JF53              	100.00%
Bootstrap support for C0NSR3 as seed ortholog is 99%.
Bootstrap support for A8JF53 as seed ortholog is 100%.

Group of orthologs #544. Best score 259 bits
Score difference with first non-orthologous sequence - A.capsulata:89 C.reinhardtii:259

C0NG61              	100.00%		A8JFA4              	100.00%
Bootstrap support for C0NG61 as seed ortholog is 98%.
Bootstrap support for A8JFA4 as seed ortholog is 100%.

Group of orthologs #545. Best score 259 bits
Score difference with first non-orthologous sequence - A.capsulata:29 C.reinhardtii:259

C0NS87              	100.00%		A8JGM8              	100.00%
Bootstrap support for C0NS87 as seed ortholog is 69%.
Alternative seed ortholog is C0NZA7 (29 bits away from this cluster)
Bootstrap support for A8JGM8 as seed ortholog is 100%.

Group of orthologs #546. Best score 258 bits
Score difference with first non-orthologous sequence - A.capsulata:258 C.reinhardtii:258

C0NZX2              	100.00%		A8JH50              	100.00%
Bootstrap support for C0NZX2 as seed ortholog is 100%.
Bootstrap support for A8JH50 as seed ortholog is 100%.

Group of orthologs #547. Best score 257 bits
Score difference with first non-orthologous sequence - A.capsulata:257 C.reinhardtii:130

C0NIS9              	100.00%		A8I8J2              	100.00%
Bootstrap support for C0NIS9 as seed ortholog is 100%.
Bootstrap support for A8I8J2 as seed ortholog is 99%.

Group of orthologs #548. Best score 257 bits
Score difference with first non-orthologous sequence - A.capsulata:257 C.reinhardtii:257

C0NJD3              	100.00%		A8IC90              	100.00%
Bootstrap support for C0NJD3 as seed ortholog is 100%.
Bootstrap support for A8IC90 as seed ortholog is 100%.

Group of orthologs #549. Best score 257 bits
Score difference with first non-orthologous sequence - A.capsulata:257 C.reinhardtii:257

C0NRE7              	100.00%		A8J0Z8              	100.00%
Bootstrap support for C0NRE7 as seed ortholog is 100%.
Bootstrap support for A8J0Z8 as seed ortholog is 100%.

Group of orthologs #550. Best score 256 bits
Score difference with first non-orthologous sequence - A.capsulata:256 C.reinhardtii:256

C0NU34              	100.00%		A8J2N5              	100.00%
Bootstrap support for C0NU34 as seed ortholog is 100%.
Bootstrap support for A8J2N5 as seed ortholog is 100%.

Group of orthologs #551. Best score 255 bits
Score difference with first non-orthologous sequence - A.capsulata:255 C.reinhardtii:255

C0ND48              	100.00%		A8ISG1              	100.00%
Bootstrap support for C0ND48 as seed ortholog is 100%.
Bootstrap support for A8ISG1 as seed ortholog is 100%.

Group of orthologs #552. Best score 255 bits
Score difference with first non-orthologous sequence - A.capsulata:255 C.reinhardtii:255

C0NGQ6              	100.00%		A8IWJ5              	100.00%
Bootstrap support for C0NGQ6 as seed ortholog is 100%.
Bootstrap support for A8IWJ5 as seed ortholog is 100%.

Group of orthologs #553. Best score 255 bits
Score difference with first non-orthologous sequence - A.capsulata:255 C.reinhardtii:255

C0NCN9              	100.00%		A8JDZ0              	100.00%
Bootstrap support for C0NCN9 as seed ortholog is 100%.
Bootstrap support for A8JDZ0 as seed ortholog is 100%.

Group of orthologs #554. Best score 254 bits
Score difference with first non-orthologous sequence - A.capsulata:254 C.reinhardtii:254

C0NSE7              	100.00%		A8I1A7              	100.00%
Bootstrap support for C0NSE7 as seed ortholog is 100%.
Bootstrap support for A8I1A7 as seed ortholog is 100%.

Group of orthologs #555. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:21 C.reinhardtii:253

C0NH28              	100.00%		A8JCH8              	100.00%
C0NWD3              	19.21%		
C0NQ44              	16.81%		
C0NGY0              	13.74%		
Bootstrap support for C0NH28 as seed ortholog is 57%.
Alternative seed ortholog is C0NAB2 (21 bits away from this cluster)
Bootstrap support for A8JCH8 as seed ortholog is 100%.

Group of orthologs #556. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:253 C.reinhardtii:253

C0NKI2              	100.00%		A8I4T2              	100.00%
Bootstrap support for C0NKI2 as seed ortholog is 100%.
Bootstrap support for A8I4T2 as seed ortholog is 100%.

Group of orthologs #557. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:253 C.reinhardtii:253

C0NJY5              	100.00%		A8J1G8              	100.00%
Bootstrap support for C0NJY5 as seed ortholog is 100%.
Bootstrap support for A8J1G8 as seed ortholog is 100%.

Group of orthologs #558. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:143 C.reinhardtii:168

C0NMK9              	100.00%		A8J1A0              	100.00%
Bootstrap support for C0NMK9 as seed ortholog is 99%.
Bootstrap support for A8J1A0 as seed ortholog is 99%.

Group of orthologs #559. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:253 C.reinhardtii:253

C0P138              	100.00%		A8J0I7              	100.00%
Bootstrap support for C0P138 as seed ortholog is 100%.
Bootstrap support for A8J0I7 as seed ortholog is 100%.

Group of orthologs #560. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:253 C.reinhardtii:253

C0NQQ6              	100.00%		A8JGS3              	100.00%
Bootstrap support for C0NQQ6 as seed ortholog is 100%.
Bootstrap support for A8JGS3 as seed ortholog is 100%.

Group of orthologs #561. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:67 C.reinhardtii:24

C0NY44              	100.00%		A8JBH0              	100.00%
Bootstrap support for C0NY44 as seed ortholog is 94%.
Bootstrap support for A8JBH0 as seed ortholog is 71%.
Alternative seed ortholog is A8I872 (24 bits away from this cluster)

Group of orthologs #562. Best score 252 bits
Score difference with first non-orthologous sequence - A.capsulata:252 C.reinhardtii:252

C0NDW4              	100.00%		A8IQD6              	100.00%
Bootstrap support for C0NDW4 as seed ortholog is 100%.
Bootstrap support for A8IQD6 as seed ortholog is 100%.

Group of orthologs #563. Best score 252 bits
Score difference with first non-orthologous sequence - A.capsulata:252 C.reinhardtii:252

C0NHA0              	100.00%		A8IMY5              	100.00%
Bootstrap support for C0NHA0 as seed ortholog is 100%.
Bootstrap support for A8IMY5 as seed ortholog is 100%.

Group of orthologs #564. Best score 252 bits
Score difference with first non-orthologous sequence - A.capsulata:169 C.reinhardtii:2

C0NXS2              	100.00%		A8HRQ4              	100.00%
Bootstrap support for C0NXS2 as seed ortholog is 100%.
Bootstrap support for A8HRQ4 as seed ortholog is 45%.
Alternative seed ortholog is A8IKV5 (2 bits away from this cluster)

Group of orthologs #565. Best score 252 bits
Score difference with first non-orthologous sequence - A.capsulata:252 C.reinhardtii:252

C0NVZ4              	100.00%		A8JAS9              	100.00%
Bootstrap support for C0NVZ4 as seed ortholog is 100%.
Bootstrap support for A8JAS9 as seed ortholog is 100%.

Group of orthologs #566. Best score 251 bits
Score difference with first non-orthologous sequence - A.capsulata:251 C.reinhardtii:251

C0NI59              	100.00%		A8I843              	100.00%
Bootstrap support for C0NI59 as seed ortholog is 100%.
Bootstrap support for A8I843 as seed ortholog is 100%.

Group of orthologs #567. Best score 251 bits
Score difference with first non-orthologous sequence - A.capsulata:147 C.reinhardtii:150

C0NCA7              	100.00%		A8JC30              	100.00%
Bootstrap support for C0NCA7 as seed ortholog is 100%.
Bootstrap support for A8JC30 as seed ortholog is 100%.

Group of orthologs #568. Best score 251 bits
Score difference with first non-orthologous sequence - A.capsulata:251 C.reinhardtii:251

C0NDE1              	100.00%		A8JEW4              	100.00%
Bootstrap support for C0NDE1 as seed ortholog is 100%.
Bootstrap support for A8JEW4 as seed ortholog is 100%.

Group of orthologs #569. Best score 250 bits
Score difference with first non-orthologous sequence - A.capsulata:250 C.reinhardtii:192

C0NI42              	100.00%		A8HQG9              	100.00%
Bootstrap support for C0NI42 as seed ortholog is 100%.
Bootstrap support for A8HQG9 as seed ortholog is 99%.

Group of orthologs #570. Best score 250 bits
Score difference with first non-orthologous sequence - A.capsulata:250 C.reinhardtii:250

C0NEA5              	100.00%		A8IWJ3              	100.00%
Bootstrap support for C0NEA5 as seed ortholog is 100%.
Bootstrap support for A8IWJ3 as seed ortholog is 100%.

Group of orthologs #571. Best score 250 bits
Score difference with first non-orthologous sequence - A.capsulata:91 C.reinhardtii:105

C0NP16              	100.00%		A8IRR7              	100.00%
Bootstrap support for C0NP16 as seed ortholog is 97%.
Bootstrap support for A8IRR7 as seed ortholog is 97%.

Group of orthologs #572. Best score 250 bits
Score difference with first non-orthologous sequence - A.capsulata:250 C.reinhardtii:250

C0P0L9              	100.00%		A8J7E9              	100.00%
Bootstrap support for C0P0L9 as seed ortholog is 100%.
Bootstrap support for A8J7E9 as seed ortholog is 100%.

Group of orthologs #573. Best score 248 bits
Score difference with first non-orthologous sequence - A.capsulata:248 C.reinhardtii:248

C0NCS0              	100.00%		O65000              	100.00%
                    	       		Q9FE26              	28.42%
Bootstrap support for C0NCS0 as seed ortholog is 100%.
Bootstrap support for O65000 as seed ortholog is 100%.

Group of orthologs #574. Best score 248 bits
Score difference with first non-orthologous sequence - A.capsulata:248 C.reinhardtii:52

C0NT32              	100.00%		A8IXK0              	100.00%
Bootstrap support for C0NT32 as seed ortholog is 100%.
Bootstrap support for A8IXK0 as seed ortholog is 87%.

Group of orthologs #575. Best score 248 bits
Score difference with first non-orthologous sequence - A.capsulata:248 C.reinhardtii:248

C0NCH9              	100.00%		O48949              	100.00%
Bootstrap support for C0NCH9 as seed ortholog is 100%.
Bootstrap support for O48949 as seed ortholog is 100%.

Group of orthologs #576. Best score 248 bits
Score difference with first non-orthologous sequence - A.capsulata:84 C.reinhardtii:74

C0NR36              	100.00%		A8JAQ0              	100.00%
Bootstrap support for C0NR36 as seed ortholog is 98%.
Bootstrap support for A8JAQ0 as seed ortholog is 98%.

Group of orthologs #577. Best score 248 bits
Score difference with first non-orthologous sequence - A.capsulata:162 C.reinhardtii:248

C0NXY3              	100.00%		A8J6H8              	100.00%
Bootstrap support for C0NXY3 as seed ortholog is 99%.
Bootstrap support for A8J6H8 as seed ortholog is 100%.

Group of orthologs #578. Best score 247 bits
Score difference with first non-orthologous sequence - A.capsulata:247 C.reinhardtii:247

C0NAN1              	100.00%		A8IL16              	100.00%
Bootstrap support for C0NAN1 as seed ortholog is 100%.
Bootstrap support for A8IL16 as seed ortholog is 100%.

Group of orthologs #579. Best score 247 bits
Score difference with first non-orthologous sequence - A.capsulata:247 C.reinhardtii:247

C0NLZ0              	100.00%		A8HSQ9              	100.00%
Bootstrap support for C0NLZ0 as seed ortholog is 100%.
Bootstrap support for A8HSQ9 as seed ortholog is 100%.

Group of orthologs #580. Best score 247 bits
Score difference with first non-orthologous sequence - A.capsulata:247 C.reinhardtii:247

C0P1A0              	100.00%		A8IH03              	100.00%
Bootstrap support for C0P1A0 as seed ortholog is 100%.
Bootstrap support for A8IH03 as seed ortholog is 100%.

Group of orthologs #581. Best score 247 bits
Score difference with first non-orthologous sequence - A.capsulata:247 C.reinhardtii:247

C0NV27              	100.00%		A8JBY6              	100.00%
Bootstrap support for C0NV27 as seed ortholog is 100%.
Bootstrap support for A8JBY6 as seed ortholog is 100%.

Group of orthologs #582. Best score 246 bits
Score difference with first non-orthologous sequence - A.capsulata:246 C.reinhardtii:246

C0NNF5              	100.00%		A8HZC5              	100.00%
Bootstrap support for C0NNF5 as seed ortholog is 100%.
Bootstrap support for A8HZC5 as seed ortholog is 100%.

Group of orthologs #583. Best score 246 bits
Score difference with first non-orthologous sequence - A.capsulata:21 C.reinhardtii:37

C0NPQ3              	100.00%		A8IL29              	100.00%
Bootstrap support for C0NPQ3 as seed ortholog is 82%.
Bootstrap support for A8IL29 as seed ortholog is 96%.

Group of orthologs #584. Best score 246 bits
Score difference with first non-orthologous sequence - A.capsulata:246 C.reinhardtii:246

C0NH34              	100.00%		A8J2W1              	100.00%
Bootstrap support for C0NH34 as seed ortholog is 100%.
Bootstrap support for A8J2W1 as seed ortholog is 100%.

Group of orthologs #585. Best score 245 bits
Score difference with first non-orthologous sequence - A.capsulata:245 C.reinhardtii:245

C0NKX2              	100.00%		A8IZ93              	100.00%
C0NDH6              	7.56%		
C0NJY6              	6.35%		
Bootstrap support for C0NKX2 as seed ortholog is 100%.
Bootstrap support for A8IZ93 as seed ortholog is 100%.

Group of orthologs #586. Best score 245 bits
Score difference with first non-orthologous sequence - A.capsulata:245 C.reinhardtii:245

C0NUY8              	100.00%		A8I3J7              	100.00%
Bootstrap support for C0NUY8 as seed ortholog is 100%.
Bootstrap support for A8I3J7 as seed ortholog is 100%.

Group of orthologs #587. Best score 245 bits
Score difference with first non-orthologous sequence - A.capsulata:245 C.reinhardtii:245

C0P146              	100.00%		A8IYG7              	100.00%
Bootstrap support for C0P146 as seed ortholog is 100%.
Bootstrap support for A8IYG7 as seed ortholog is 100%.

Group of orthologs #588. Best score 245 bits
Score difference with first non-orthologous sequence - A.capsulata:245 C.reinhardtii:192

C0NVE4              	100.00%		A8J768              	100.00%
Bootstrap support for C0NVE4 as seed ortholog is 100%.
Bootstrap support for A8J768 as seed ortholog is 100%.

Group of orthologs #589. Best score 244 bits
Score difference with first non-orthologous sequence - A.capsulata:244 C.reinhardtii:111

C0NEJ7              	100.00%		A8HXA6              	100.00%
                    	       		A8J448              	5.26%
Bootstrap support for C0NEJ7 as seed ortholog is 100%.
Bootstrap support for A8HXA6 as seed ortholog is 99%.

Group of orthologs #590. Best score 243 bits
Score difference with first non-orthologous sequence - A.capsulata:243 C.reinhardtii:150

C0NQD2              	100.00%		A8ICN2              	100.00%
                    	       		A8HNN4              	56.37%
                    	       		A8HNN6              	54.86%
Bootstrap support for C0NQD2 as seed ortholog is 100%.
Bootstrap support for A8ICN2 as seed ortholog is 99%.

Group of orthologs #591. Best score 243 bits
Score difference with first non-orthologous sequence - A.capsulata:123 C.reinhardtii:243

C0NMY3              	100.00%		A8IZZ4              	100.00%
                    	       		A8JF17              	5.36%
Bootstrap support for C0NMY3 as seed ortholog is 100%.
Bootstrap support for A8IZZ4 as seed ortholog is 100%.

Group of orthologs #592. Best score 243 bits
Score difference with first non-orthologous sequence - A.capsulata:102 C.reinhardtii:62

C0NX46              	100.00%		A8J1Y2              	100.00%
Bootstrap support for C0NX46 as seed ortholog is 98%.
Bootstrap support for A8J1Y2 as seed ortholog is 94%.

Group of orthologs #593. Best score 242 bits
Score difference with first non-orthologous sequence - A.capsulata:81 C.reinhardtii:51

C0NL20              	100.00%		A8J8R3              	100.00%
                    	       		A8J8R1              	44.94%
Bootstrap support for C0NL20 as seed ortholog is 91%.
Bootstrap support for A8J8R3 as seed ortholog is 87%.

Group of orthologs #594. Best score 242 bits
Score difference with first non-orthologous sequence - A.capsulata:242 C.reinhardtii:242

C0NRR5              	100.00%		A8J9Q3              	100.00%
Bootstrap support for C0NRR5 as seed ortholog is 100%.
Bootstrap support for A8J9Q3 as seed ortholog is 100%.

Group of orthologs #595. Best score 242 bits
Score difference with first non-orthologous sequence - A.capsulata:242 C.reinhardtii:242

C0NUN7              	100.00%		A8J8U1              	100.00%
Bootstrap support for C0NUN7 as seed ortholog is 100%.
Bootstrap support for A8J8U1 as seed ortholog is 100%.

Group of orthologs #596. Best score 241 bits
Score difference with first non-orthologous sequence - A.capsulata:130 C.reinhardtii:71

P60206              	100.00%		A8IDP6              	100.00%
Bootstrap support for P60206 as seed ortholog is 100%.
Bootstrap support for A8IDP6 as seed ortholog is 99%.

Group of orthologs #597. Best score 241 bits
Score difference with first non-orthologous sequence - A.capsulata:101 C.reinhardtii:42

C0NYV5              	100.00%		A8JHI5              	100.00%
Bootstrap support for C0NYV5 as seed ortholog is 99%.
Bootstrap support for A8JHI5 as seed ortholog is 95%.

Group of orthologs #598. Best score 240 bits
Score difference with first non-orthologous sequence - A.capsulata:240 C.reinhardtii:240

C0NZH9              	100.00%		A6YCJ2              	100.00%
Bootstrap support for C0NZH9 as seed ortholog is 100%.
Bootstrap support for A6YCJ2 as seed ortholog is 100%.

Group of orthologs #599. Best score 240 bits
Score difference with first non-orthologous sequence - A.capsulata:5 C.reinhardtii:68

C0P103              	100.00%		A8IZJ9              	100.00%
Bootstrap support for C0P103 as seed ortholog is 55%.
Alternative seed ortholog is C0NAU3 (5 bits away from this cluster)
Bootstrap support for A8IZJ9 as seed ortholog is 94%.

Group of orthologs #600. Best score 239 bits
Score difference with first non-orthologous sequence - A.capsulata:239 C.reinhardtii:239

C0NFT5              	100.00%		A8J0M8              	100.00%
                    	       		A8JA83              	6.58%
Bootstrap support for C0NFT5 as seed ortholog is 100%.
Bootstrap support for A8J0M8 as seed ortholog is 100%.

Group of orthologs #601. Best score 239 bits
Score difference with first non-orthologous sequence - A.capsulata:239 C.reinhardtii:239

C0NJ73              	100.00%		A8J9V0              	100.00%
Bootstrap support for C0NJ73 as seed ortholog is 100%.
Bootstrap support for A8J9V0 as seed ortholog is 100%.

Group of orthologs #602. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:238 C.reinhardtii:238

C0NYK0              	100.00%		A8I3V3              	100.00%
                    	       		A8IXF1              	47.83%
Bootstrap support for C0NYK0 as seed ortholog is 100%.
Bootstrap support for A8I3V3 as seed ortholog is 100%.

Group of orthologs #603. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:238 C.reinhardtii:238

C0NJN5              	100.00%		A8HYG6              	100.00%
Bootstrap support for C0NJN5 as seed ortholog is 100%.
Bootstrap support for A8HYG6 as seed ortholog is 100%.

Group of orthologs #604. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:60 C.reinhardtii:238

C0NMK2              	100.00%		A8IQP6              	100.00%
Bootstrap support for C0NMK2 as seed ortholog is 88%.
Bootstrap support for A8IQP6 as seed ortholog is 100%.

Group of orthologs #605. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:238 C.reinhardtii:238

C0NFB5              	100.00%		A8JBN4              	100.00%
Bootstrap support for C0NFB5 as seed ortholog is 100%.
Bootstrap support for A8JBN4 as seed ortholog is 100%.

Group of orthologs #606. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:238 C.reinhardtii:238

C0NZX6              	100.00%		A8IN95              	100.00%
Bootstrap support for C0NZX6 as seed ortholog is 100%.
Bootstrap support for A8IN95 as seed ortholog is 100%.

Group of orthologs #607. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:238 C.reinhardtii:238

C0NGG2              	100.00%		Q6V9B1              	100.00%
Bootstrap support for C0NGG2 as seed ortholog is 100%.
Bootstrap support for Q6V9B1 as seed ortholog is 100%.

Group of orthologs #608. Best score 237 bits
Score difference with first non-orthologous sequence - A.capsulata:237 C.reinhardtii:237

C0NC88              	100.00%		A8HXN9              	100.00%
Bootstrap support for C0NC88 as seed ortholog is 100%.
Bootstrap support for A8HXN9 as seed ortholog is 100%.

Group of orthologs #609. Best score 237 bits
Score difference with first non-orthologous sequence - A.capsulata:121 C.reinhardtii:141

C0NG01              	100.00%		A8J8S6              	100.00%
Bootstrap support for C0NG01 as seed ortholog is 99%.
Bootstrap support for A8J8S6 as seed ortholog is 99%.

Group of orthologs #610. Best score 237 bits
Score difference with first non-orthologous sequence - A.capsulata:237 C.reinhardtii:237

C0NZ31              	100.00%		A8J326              	100.00%
Bootstrap support for C0NZ31 as seed ortholog is 100%.
Bootstrap support for A8J326 as seed ortholog is 100%.

Group of orthologs #611. Best score 236 bits
Score difference with first non-orthologous sequence - A.capsulata:236 C.reinhardtii:236

C0NR17              	100.00%		A8IHG8              	100.00%
Bootstrap support for C0NR17 as seed ortholog is 100%.
Bootstrap support for A8IHG8 as seed ortholog is 100%.

Group of orthologs #612. Best score 236 bits
Score difference with first non-orthologous sequence - A.capsulata:236 C.reinhardtii:236

C0NWL7              	100.00%		A8I629              	100.00%
Bootstrap support for C0NWL7 as seed ortholog is 100%.
Bootstrap support for A8I629 as seed ortholog is 100%.

Group of orthologs #613. Best score 236 bits
Score difference with first non-orthologous sequence - A.capsulata:236 C.reinhardtii:236

C0NS59              	100.00%		A8IKB7              	100.00%
Bootstrap support for C0NS59 as seed ortholog is 100%.
Bootstrap support for A8IKB7 as seed ortholog is 100%.

Group of orthologs #614. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:160 C.reinhardtii:50

C0NAE6              	100.00%		A8J282              	100.00%
                    	       		A8JDL5              	100.00%
                    	       		A8IY43              	5.78%
Bootstrap support for C0NAE6 as seed ortholog is 100%.
Bootstrap support for A8J282 as seed ortholog is 96%.
Bootstrap support for A8JDL5 as seed ortholog is 98%.

Group of orthologs #615. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:235 C.reinhardtii:235

C0NNS9              	100.00%		A8HXG8              	100.00%
Bootstrap support for C0NNS9 as seed ortholog is 100%.
Bootstrap support for A8HXG8 as seed ortholog is 100%.

Group of orthologs #616. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:235 C.reinhardtii:235

C0NBK9              	100.00%		A8J149              	100.00%
Bootstrap support for C0NBK9 as seed ortholog is 100%.
Bootstrap support for A8J149 as seed ortholog is 100%.

Group of orthologs #617. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:235 C.reinhardtii:76

C0NGE5              	100.00%		A8J698              	100.00%
Bootstrap support for C0NGE5 as seed ortholog is 100%.
Bootstrap support for A8J698 as seed ortholog is 77%.

Group of orthologs #618. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:121 C.reinhardtii:111

C0NSF5              	100.00%		A8J435              	100.00%
Bootstrap support for C0NSF5 as seed ortholog is 99%.
Bootstrap support for A8J435 as seed ortholog is 99%.

Group of orthologs #619. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:235 C.reinhardtii:235

C0NYW7              	100.00%		A8J3T9              	100.00%
Bootstrap support for C0NYW7 as seed ortholog is 100%.
Bootstrap support for A8J3T9 as seed ortholog is 100%.

Group of orthologs #620. Best score 234 bits
Score difference with first non-orthologous sequence - A.capsulata:234 C.reinhardtii:234

C0NPD0              	100.00%		A8IVD4              	100.00%
C0NMC0              	9.31%		A8J7L6              	39.06%
Bootstrap support for C0NPD0 as seed ortholog is 100%.
Bootstrap support for A8IVD4 as seed ortholog is 100%.

Group of orthologs #621. Best score 234 bits
Score difference with first non-orthologous sequence - A.capsulata:234 C.reinhardtii:234

C0NYG0              	100.00%		A8J9L2              	100.00%
                    	       		A8I3R2              	8.37%
Bootstrap support for C0NYG0 as seed ortholog is 100%.
Bootstrap support for A8J9L2 as seed ortholog is 100%.

Group of orthologs #622. Best score 234 bits
Score difference with first non-orthologous sequence - A.capsulata:234 C.reinhardtii:182

C0NAG5              	100.00%		A8HQ81              	100.00%
Bootstrap support for C0NAG5 as seed ortholog is 100%.
Bootstrap support for A8HQ81 as seed ortholog is 100%.

Group of orthologs #623. Best score 234 bits
Score difference with first non-orthologous sequence - A.capsulata:234 C.reinhardtii:123

C0NIN6              	100.00%		A8IBU9              	100.00%
Bootstrap support for C0NIN6 as seed ortholog is 100%.
Bootstrap support for A8IBU9 as seed ortholog is 99%.

Group of orthologs #624. Best score 233 bits
Score difference with first non-orthologous sequence - A.capsulata:233 C.reinhardtii:233

C0NM58              	100.00%		A8HN92              	100.00%
Bootstrap support for C0NM58 as seed ortholog is 100%.
Bootstrap support for A8HN92 as seed ortholog is 100%.

Group of orthologs #625. Best score 233 bits
Score difference with first non-orthologous sequence - A.capsulata:167 C.reinhardtii:54

C0NIU6              	100.00%		A8IJE8              	100.00%
Bootstrap support for C0NIU6 as seed ortholog is 99%.
Bootstrap support for A8IJE8 as seed ortholog is 86%.

Group of orthologs #626. Best score 233 bits
Score difference with first non-orthologous sequence - A.capsulata:233 C.reinhardtii:233

C0NNE1              	100.00%		A8J8T5              	100.00%
Bootstrap support for C0NNE1 as seed ortholog is 100%.
Bootstrap support for A8J8T5 as seed ortholog is 100%.

Group of orthologs #627. Best score 232 bits
Score difference with first non-orthologous sequence - A.capsulata:90 C.reinhardtii:39

C0NL60              	100.00%		A8HSA7              	100.00%
                    	       		A8J9M0              	96.88%
                    	       		A8IK09              	93.75%
                    	       		A8HWY2              	87.50%
Bootstrap support for C0NL60 as seed ortholog is 100%.
Bootstrap support for A8HSA7 as seed ortholog is 99%.

Group of orthologs #628. Best score 232 bits
Score difference with first non-orthologous sequence - A.capsulata:122 C.reinhardtii:93

C0NR51              	100.00%		A8HPT5              	100.00%
Bootstrap support for C0NR51 as seed ortholog is 94%.
Bootstrap support for A8HPT5 as seed ortholog is 95%.

Group of orthologs #629. Best score 232 bits
Score difference with first non-orthologous sequence - A.capsulata:232 C.reinhardtii:165

C0NXM8              	100.00%		A8IT87              	100.00%
Bootstrap support for C0NXM8 as seed ortholog is 100%.
Bootstrap support for A8IT87 as seed ortholog is 99%.

Group of orthologs #630. Best score 231 bits
Score difference with first non-orthologous sequence - A.capsulata:231 C.reinhardtii:231

C0NQW8              	100.00%		A8IMN5              	100.00%
Bootstrap support for C0NQW8 as seed ortholog is 100%.
Bootstrap support for A8IMN5 as seed ortholog is 100%.

Group of orthologs #631. Best score 230 bits
Score difference with first non-orthologous sequence - A.capsulata:230 C.reinhardtii:230

C0NIF0              	100.00%		A8ITM4              	100.00%
C0NF18              	12.59%		
Bootstrap support for C0NIF0 as seed ortholog is 100%.
Bootstrap support for A8ITM4 as seed ortholog is 100%.

Group of orthologs #632. Best score 230 bits
Score difference with first non-orthologous sequence - A.capsulata:230 C.reinhardtii:230

C0NBT1              	100.00%		A8IGY1              	100.00%
Bootstrap support for C0NBT1 as seed ortholog is 100%.
Bootstrap support for A8IGY1 as seed ortholog is 100%.

Group of orthologs #633. Best score 230 bits
Score difference with first non-orthologous sequence - A.capsulata:230 C.reinhardtii:230

C0NVZ9              	100.00%		A8IE29              	100.00%
Bootstrap support for C0NVZ9 as seed ortholog is 100%.
Bootstrap support for A8IE29 as seed ortholog is 100%.

Group of orthologs #634. Best score 230 bits
Score difference with first non-orthologous sequence - A.capsulata:230 C.reinhardtii:230

C0NQK4              	100.00%		A8J786              	100.00%
Bootstrap support for C0NQK4 as seed ortholog is 100%.
Bootstrap support for A8J786 as seed ortholog is 100%.

Group of orthologs #635. Best score 229 bits
Score difference with first non-orthologous sequence - A.capsulata:229 C.reinhardtii:229

C0NYZ4              	100.00%		A8JCT4              	100.00%
Bootstrap support for C0NYZ4 as seed ortholog is 100%.
Bootstrap support for A8JCT4 as seed ortholog is 100%.

Group of orthologs #636. Best score 228 bits
Score difference with first non-orthologous sequence - A.capsulata:157 C.reinhardtii:61

C0NKL7              	100.00%		A8IVQ7              	100.00%
Bootstrap support for C0NKL7 as seed ortholog is 100%.
Bootstrap support for A8IVQ7 as seed ortholog is 98%.

Group of orthologs #637. Best score 228 bits
Score difference with first non-orthologous sequence - A.capsulata:228 C.reinhardtii:228

C0NZA3              	100.00%		A8IGR4              	100.00%
Bootstrap support for C0NZA3 as seed ortholog is 100%.
Bootstrap support for A8IGR4 as seed ortholog is 100%.

Group of orthologs #638. Best score 227 bits
Score difference with first non-orthologous sequence - A.capsulata:227 C.reinhardtii:227

C0NB62              	100.00%		A8I9G5              	100.00%
Bootstrap support for C0NB62 as seed ortholog is 100%.
Bootstrap support for A8I9G5 as seed ortholog is 100%.

Group of orthologs #639. Best score 227 bits
Score difference with first non-orthologous sequence - A.capsulata:152 C.reinhardtii:227

C0NBA9              	100.00%		A8I9D0              	100.00%
Bootstrap support for C0NBA9 as seed ortholog is 99%.
Bootstrap support for A8I9D0 as seed ortholog is 100%.

Group of orthologs #640. Best score 227 bits
Score difference with first non-orthologous sequence - A.capsulata:227 C.reinhardtii:227

C0NGD3              	100.00%		A8JCS3              	100.00%
Bootstrap support for C0NGD3 as seed ortholog is 100%.
Bootstrap support for A8JCS3 as seed ortholog is 100%.

Group of orthologs #641. Best score 227 bits
Score difference with first non-orthologous sequence - A.capsulata:227 C.reinhardtii:227

C0NUD1              	100.00%		A8JAV5              	100.00%
Bootstrap support for C0NUD1 as seed ortholog is 100%.
Bootstrap support for A8JAV5 as seed ortholog is 100%.

Group of orthologs #642. Best score 226 bits
Score difference with first non-orthologous sequence - A.capsulata:226 C.reinhardtii:226

C0NA56              	100.00%		A8IRX1              	100.00%
Bootstrap support for C0NA56 as seed ortholog is 100%.
Bootstrap support for A8IRX1 as seed ortholog is 100%.

Group of orthologs #643. Best score 226 bits
Score difference with first non-orthologous sequence - A.capsulata:226 C.reinhardtii:226

C0NDT0              	100.00%		A8J409              	100.00%
Bootstrap support for C0NDT0 as seed ortholog is 100%.
Bootstrap support for A8J409 as seed ortholog is 100%.

Group of orthologs #644. Best score 225 bits
Score difference with first non-orthologous sequence - A.capsulata:225 C.reinhardtii:225

C0NNW0              	100.00%		A8IWM5              	100.00%
Bootstrap support for C0NNW0 as seed ortholog is 100%.
Bootstrap support for A8IWM5 as seed ortholog is 100%.

Group of orthologs #645. Best score 225 bits
Score difference with first non-orthologous sequence - A.capsulata:147 C.reinhardtii:225

C0NV12              	100.00%		A8IT96              	100.00%
Bootstrap support for C0NV12 as seed ortholog is 100%.
Bootstrap support for A8IT96 as seed ortholog is 100%.

Group of orthologs #646. Best score 225 bits
Score difference with first non-orthologous sequence - A.capsulata:225 C.reinhardtii:225

C0NQD0              	100.00%		A8J7Y2              	100.00%
Bootstrap support for C0NQD0 as seed ortholog is 100%.
Bootstrap support for A8J7Y2 as seed ortholog is 100%.

Group of orthologs #647. Best score 225 bits
Score difference with first non-orthologous sequence - A.capsulata:20 C.reinhardtii:17

C0NPQ8              	100.00%		A8J9T9              	100.00%
Bootstrap support for C0NPQ8 as seed ortholog is 67%.
Alternative seed ortholog is C0NBV1 (20 bits away from this cluster)
Bootstrap support for A8J9T9 as seed ortholog is 66%.
Alternative seed ortholog is A8JEV2 (17 bits away from this cluster)

Group of orthologs #648. Best score 224 bits
Score difference with first non-orthologous sequence - A.capsulata:224 C.reinhardtii:224

C0NCU0              	100.00%		A8I9R7              	100.00%
Bootstrap support for C0NCU0 as seed ortholog is 100%.
Bootstrap support for A8I9R7 as seed ortholog is 100%.

Group of orthologs #649. Best score 224 bits
Score difference with first non-orthologous sequence - A.capsulata:92 C.reinhardtii:100

C0NRH4              	100.00%		A8HQ77              	100.00%
Bootstrap support for C0NRH4 as seed ortholog is 100%.
Bootstrap support for A8HQ77 as seed ortholog is 99%.

Group of orthologs #650. Best score 224 bits
Score difference with first non-orthologous sequence - A.capsulata:224 C.reinhardtii:224

C0NAG0              	100.00%		A8JCR0              	100.00%
Bootstrap support for C0NAG0 as seed ortholog is 100%.
Bootstrap support for A8JCR0 as seed ortholog is 100%.

Group of orthologs #651. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:166 C.reinhardtii:223

C0NM54              	100.00%		A8HYK4              	100.00%
Bootstrap support for C0NM54 as seed ortholog is 100%.
Bootstrap support for A8HYK4 as seed ortholog is 100%.

Group of orthologs #652. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:223 C.reinhardtii:223

C0NSS3              	100.00%		A8HSZ0              	100.00%
Bootstrap support for C0NSS3 as seed ortholog is 100%.
Bootstrap support for A8HSZ0 as seed ortholog is 100%.

Group of orthologs #653. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:223 C.reinhardtii:223

C0NMF6              	100.00%		A8IKZ2              	100.00%
Bootstrap support for C0NMF6 as seed ortholog is 100%.
Bootstrap support for A8IKZ2 as seed ortholog is 100%.

Group of orthologs #654. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:223 C.reinhardtii:168

C0NX47              	100.00%		A8HVP2              	100.00%
Bootstrap support for C0NX47 as seed ortholog is 100%.
Bootstrap support for A8HVP2 as seed ortholog is 100%.

Group of orthologs #655. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:223 C.reinhardtii:223

C0NLV9              	100.00%		A8ITI8              	100.00%
Bootstrap support for C0NLV9 as seed ortholog is 100%.
Bootstrap support for A8ITI8 as seed ortholog is 100%.

Group of orthologs #656. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:57 C.reinhardtii:72

C0NLF5              	100.00%		Q66YD3              	100.00%
Bootstrap support for C0NLF5 as seed ortholog is 85%.
Bootstrap support for Q66YD3 as seed ortholog is 99%.

Group of orthologs #657. Best score 222 bits
Score difference with first non-orthologous sequence - A.capsulata:41 C.reinhardtii:128

C0NZE9              	100.00%		A8J8V7              	100.00%
C0NA62              	41.19%		
Bootstrap support for C0NZE9 as seed ortholog is 85%.
Bootstrap support for A8J8V7 as seed ortholog is 99%.

Group of orthologs #658. Best score 222 bits
Score difference with first non-orthologous sequence - A.capsulata:111 C.reinhardtii:104

C0NC86              	100.00%		A8HTR9              	100.00%
Bootstrap support for C0NC86 as seed ortholog is 98%.
Bootstrap support for A8HTR9 as seed ortholog is 98%.

Group of orthologs #659. Best score 222 bits
Score difference with first non-orthologous sequence - A.capsulata:222 C.reinhardtii:222

C0NST9              	100.00%		A8HVQ1              	100.00%
Bootstrap support for C0NST9 as seed ortholog is 100%.
Bootstrap support for A8HVQ1 as seed ortholog is 100%.

Group of orthologs #660. Best score 222 bits
Score difference with first non-orthologous sequence - A.capsulata:222 C.reinhardtii:222

C0NL86              	100.00%		A8IR47              	100.00%
Bootstrap support for C0NL86 as seed ortholog is 100%.
Bootstrap support for A8IR47 as seed ortholog is 100%.

Group of orthologs #661. Best score 222 bits
Score difference with first non-orthologous sequence - A.capsulata:125 C.reinhardtii:168

C0NRY9              	100.00%		A8IC07              	100.00%
Bootstrap support for C0NRY9 as seed ortholog is 99%.
Bootstrap support for A8IC07 as seed ortholog is 99%.

Group of orthologs #662. Best score 222 bits
Score difference with first non-orthologous sequence - A.capsulata:222 C.reinhardtii:222

C0NT20              	100.00%		A8J7L1              	100.00%
Bootstrap support for C0NT20 as seed ortholog is 100%.
Bootstrap support for A8J7L1 as seed ortholog is 100%.

Group of orthologs #663. Best score 222 bits
Score difference with first non-orthologous sequence - A.capsulata:222 C.reinhardtii:222

C0NT33              	100.00%		A8JEG5              	100.00%
Bootstrap support for C0NT33 as seed ortholog is 100%.
Bootstrap support for A8JEG5 as seed ortholog is 100%.

Group of orthologs #664. Best score 222 bits
Score difference with first non-orthologous sequence - A.capsulata:84 C.reinhardtii:54

C0NWY7              	100.00%		A8JFI8              	100.00%
Bootstrap support for C0NWY7 as seed ortholog is 99%.
Bootstrap support for A8JFI8 as seed ortholog is 99%.

Group of orthologs #665. Best score 221 bits
Score difference with first non-orthologous sequence - A.capsulata:221 C.reinhardtii:165

C0NAJ6              	100.00%		A8ICC8              	100.00%
Bootstrap support for C0NAJ6 as seed ortholog is 100%.
Bootstrap support for A8ICC8 as seed ortholog is 100%.

Group of orthologs #666. Best score 221 bits
Score difference with first non-orthologous sequence - A.capsulata:221 C.reinhardtii:221

C0NL48              	100.00%		A8J018              	100.00%
Bootstrap support for C0NL48 as seed ortholog is 100%.
Bootstrap support for A8J018 as seed ortholog is 100%.

Group of orthologs #667. Best score 220 bits
Score difference with first non-orthologous sequence - A.capsulata:80 C.reinhardtii:20

C0NMF5              	100.00%		A8IXI7              	100.00%
Bootstrap support for C0NMF5 as seed ortholog is 96%.
Bootstrap support for A8IXI7 as seed ortholog is 69%.
Alternative seed ortholog is A8HW48 (20 bits away from this cluster)

Group of orthologs #668. Best score 220 bits
Score difference with first non-orthologous sequence - A.capsulata:50 C.reinhardtii:41

C0NF31              	100.00%		A8JFY4              	100.00%
Bootstrap support for C0NF31 as seed ortholog is 98%.
Bootstrap support for A8JFY4 as seed ortholog is 94%.

Group of orthologs #669. Best score 219 bits
Score difference with first non-orthologous sequence - A.capsulata:219 C.reinhardtii:219

C0NAC2              	100.00%		A8HWI6              	100.00%
Bootstrap support for C0NAC2 as seed ortholog is 100%.
Bootstrap support for A8HWI6 as seed ortholog is 100%.

Group of orthologs #670. Best score 219 bits
Score difference with first non-orthologous sequence - A.capsulata:219 C.reinhardtii:25

C0NP52              	100.00%		A8JJ26              	100.00%
Bootstrap support for C0NP52 as seed ortholog is 100%.
Bootstrap support for A8JJ26 as seed ortholog is 82%.

Group of orthologs #671. Best score 218 bits
Score difference with first non-orthologous sequence - A.capsulata:218 C.reinhardtii:218

C0NJH6              	100.00%		A8HT69              	100.00%
Bootstrap support for C0NJH6 as seed ortholog is 100%.
Bootstrap support for A8HT69 as seed ortholog is 100%.

Group of orthologs #672. Best score 218 bits
Score difference with first non-orthologous sequence - A.capsulata:218 C.reinhardtii:218

C0NC43              	100.00%		A8J597              	100.00%
Bootstrap support for C0NC43 as seed ortholog is 100%.
Bootstrap support for A8J597 as seed ortholog is 100%.

Group of orthologs #673. Best score 217 bits
Score difference with first non-orthologous sequence - A.capsulata:217 C.reinhardtii:217

C0NCK7              	100.00%		A8HY57              	100.00%
Bootstrap support for C0NCK7 as seed ortholog is 100%.
Bootstrap support for A8HY57 as seed ortholog is 100%.

Group of orthologs #674. Best score 217 bits
Score difference with first non-orthologous sequence - A.capsulata:217 C.reinhardtii:217

C0NNP2              	100.00%		A8I728              	100.00%
Bootstrap support for C0NNP2 as seed ortholog is 100%.
Bootstrap support for A8I728 as seed ortholog is 100%.

Group of orthologs #675. Best score 217 bits
Score difference with first non-orthologous sequence - A.capsulata:174 C.reinhardtii:217

C0NZ37              	100.00%		A8IJ34              	100.00%
Bootstrap support for C0NZ37 as seed ortholog is 100%.
Bootstrap support for A8IJ34 as seed ortholog is 100%.

Group of orthologs #676. Best score 217 bits
Score difference with first non-orthologous sequence - A.capsulata:217 C.reinhardtii:217

C0NDR5              	100.00%		A8JHH1              	100.00%
Bootstrap support for C0NDR5 as seed ortholog is 100%.
Bootstrap support for A8JHH1 as seed ortholog is 100%.

Group of orthologs #677. Best score 216 bits
Score difference with first non-orthologous sequence - A.capsulata:102 C.reinhardtii:216

C0NMD6              	100.00%		A8J434              	100.00%
                    	       		A8IEE5              	36.74%
                    	       		A8ISA9              	33.56%
Bootstrap support for C0NMD6 as seed ortholog is 99%.
Bootstrap support for A8J434 as seed ortholog is 100%.

Group of orthologs #678. Best score 216 bits
Score difference with first non-orthologous sequence - A.capsulata:216 C.reinhardtii:216

C0NJ86              	100.00%		A8IVS6              	100.00%
Bootstrap support for C0NJ86 as seed ortholog is 100%.
Bootstrap support for A8IVS6 as seed ortholog is 100%.

Group of orthologs #679. Best score 215 bits
Score difference with first non-orthologous sequence - A.capsulata:144 C.reinhardtii:77

C0NBB3              	100.00%		A8JD64              	100.00%
                    	       		A8HUU9              	6.71%
Bootstrap support for C0NBB3 as seed ortholog is 100%.
Bootstrap support for A8JD64 as seed ortholog is 99%.

Group of orthologs #680. Best score 215 bits
Score difference with first non-orthologous sequence - A.capsulata:32 C.reinhardtii:215

C0NJG0              	100.00%		A8HPM0              	100.00%
Bootstrap support for C0NJG0 as seed ortholog is 81%.
Bootstrap support for A8HPM0 as seed ortholog is 100%.

Group of orthologs #681. Best score 215 bits
Score difference with first non-orthologous sequence - A.capsulata:215 C.reinhardtii:215

C0NCS9              	100.00%		A8J032              	100.00%
Bootstrap support for C0NCS9 as seed ortholog is 100%.
Bootstrap support for A8J032 as seed ortholog is 100%.

Group of orthologs #682. Best score 215 bits
Score difference with first non-orthologous sequence - A.capsulata:215 C.reinhardtii:161

C0NQV8              	100.00%		A8IJQ4              	100.00%
Bootstrap support for C0NQV8 as seed ortholog is 100%.
Bootstrap support for A8IJQ4 as seed ortholog is 100%.

Group of orthologs #683. Best score 215 bits
Score difference with first non-orthologous sequence - A.capsulata:215 C.reinhardtii:215

C0NYP3              	100.00%		A8IVP3              	100.00%
Bootstrap support for C0NYP3 as seed ortholog is 100%.
Bootstrap support for A8IVP3 as seed ortholog is 100%.

Group of orthologs #684. Best score 215 bits
Score difference with first non-orthologous sequence - A.capsulata:215 C.reinhardtii:215

C0NG42              	100.00%		A8JG49              	100.00%
Bootstrap support for C0NG42 as seed ortholog is 100%.
Bootstrap support for A8JG49 as seed ortholog is 100%.

Group of orthologs #685. Best score 215 bits
Score difference with first non-orthologous sequence - A.capsulata:215 C.reinhardtii:215

C0NYM4              	100.00%		A8JHC3              	100.00%
Bootstrap support for C0NYM4 as seed ortholog is 100%.
Bootstrap support for A8JHC3 as seed ortholog is 100%.

Group of orthologs #686. Best score 214 bits
Score difference with first non-orthologous sequence - A.capsulata:214 C.reinhardtii:214

C0ND66              	100.00%		A8J387              	100.00%
C0ND88              	22.77%		
Bootstrap support for C0ND66 as seed ortholog is 100%.
Bootstrap support for A8J387 as seed ortholog is 100%.

Group of orthologs #687. Best score 214 bits
Score difference with first non-orthologous sequence - A.capsulata:214 C.reinhardtii:214

C0NNJ2              	100.00%		A8I0A0              	100.00%
Bootstrap support for C0NNJ2 as seed ortholog is 100%.
Bootstrap support for A8I0A0 as seed ortholog is 100%.

Group of orthologs #688. Best score 213 bits
Score difference with first non-orthologous sequence - A.capsulata:122 C.reinhardtii:213

C0ND08              	100.00%		A8I3T3              	100.00%
Bootstrap support for C0ND08 as seed ortholog is 99%.
Bootstrap support for A8I3T3 as seed ortholog is 100%.

Group of orthologs #689. Best score 213 bits
Score difference with first non-orthologous sequence - A.capsulata:213 C.reinhardtii:213

C0NFR7              	100.00%		A8J1Q1              	100.00%
Bootstrap support for C0NFR7 as seed ortholog is 100%.
Bootstrap support for A8J1Q1 as seed ortholog is 100%.

Group of orthologs #690. Best score 213 bits
Score difference with first non-orthologous sequence - A.capsulata:213 C.reinhardtii:119

C0NIX9              	100.00%		A8J2F9              	100.00%
Bootstrap support for C0NIX9 as seed ortholog is 100%.
Bootstrap support for A8J2F9 as seed ortholog is 99%.

Group of orthologs #691. Best score 213 bits
Score difference with first non-orthologous sequence - A.capsulata:213 C.reinhardtii:213

C0NR06              	100.00%		A8IXD1              	100.00%
Bootstrap support for C0NR06 as seed ortholog is 100%.
Bootstrap support for A8IXD1 as seed ortholog is 100%.

Group of orthologs #692. Best score 213 bits
Score difference with first non-orthologous sequence - A.capsulata:103 C.reinhardtii:213

C0NNC6              	100.00%		A8J2L2              	100.00%
Bootstrap support for C0NNC6 as seed ortholog is 99%.
Bootstrap support for A8J2L2 as seed ortholog is 100%.

Group of orthologs #693. Best score 213 bits
Score difference with first non-orthologous sequence - A.capsulata:45 C.reinhardtii:38

C0NJR1              	100.00%		A8JAX1              	100.00%
Bootstrap support for C0NJR1 as seed ortholog is 90%.
Bootstrap support for A8JAX1 as seed ortholog is 88%.

Group of orthologs #694. Best score 213 bits
Score difference with first non-orthologous sequence - A.capsulata:213 C.reinhardtii:213

C0NJF2              	100.00%		A8JBC8              	100.00%
Bootstrap support for C0NJF2 as seed ortholog is 100%.
Bootstrap support for A8JBC8 as seed ortholog is 100%.

Group of orthologs #695. Best score 212 bits
Score difference with first non-orthologous sequence - A.capsulata:212 C.reinhardtii:212

C0NCM8              	100.00%		A8J7Z6              	100.00%
C0NYB3              	6.14%		
Bootstrap support for C0NCM8 as seed ortholog is 100%.
Bootstrap support for A8J7Z6 as seed ortholog is 100%.

Group of orthologs #696. Best score 212 bits
Score difference with first non-orthologous sequence - A.capsulata:149 C.reinhardtii:145

C0NAE4              	100.00%		A8IR43              	100.00%
Bootstrap support for C0NAE4 as seed ortholog is 99%.
Bootstrap support for A8IR43 as seed ortholog is 99%.

Group of orthologs #697. Best score 212 bits
Score difference with first non-orthologous sequence - A.capsulata:212 C.reinhardtii:212

C0NLZ2              	100.00%		A8HYM2              	100.00%
Bootstrap support for C0NLZ2 as seed ortholog is 100%.
Bootstrap support for A8HYM2 as seed ortholog is 100%.

Group of orthologs #698. Best score 212 bits
Score difference with first non-orthologous sequence - A.capsulata:212 C.reinhardtii:212

C0NVL7              	100.00%		A8HP11              	100.00%
Bootstrap support for C0NVL7 as seed ortholog is 100%.
Bootstrap support for A8HP11 as seed ortholog is 100%.

Group of orthologs #699. Best score 212 bits
Score difference with first non-orthologous sequence - A.capsulata:34 C.reinhardtii:212

C0NTK4              	100.00%		A8HYI5              	100.00%
Bootstrap support for C0NTK4 as seed ortholog is 84%.
Bootstrap support for A8HYI5 as seed ortholog is 100%.

Group of orthologs #700. Best score 212 bits
Score difference with first non-orthologous sequence - A.capsulata:30 C.reinhardtii:107

C0NBL0              	100.00%		A8JBH9              	100.00%
Bootstrap support for C0NBL0 as seed ortholog is 82%.
Bootstrap support for A8JBH9 as seed ortholog is 99%.

Group of orthologs #701. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:165 C.reinhardtii:211

C0NUT0              	100.00%		A8IFE2              	100.00%
C0NFI8              	47.02%		
Bootstrap support for C0NUT0 as seed ortholog is 99%.
Bootstrap support for A8IFE2 as seed ortholog is 100%.

Group of orthologs #702. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:77 C.reinhardtii:22

C0NI40              	100.00%		A8HPX8              	100.00%
Bootstrap support for C0NI40 as seed ortholog is 62%.
Alternative seed ortholog is C0NAN2 (77 bits away from this cluster)
Bootstrap support for A8HPX8 as seed ortholog is 90%.

Group of orthologs #703. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:211 C.reinhardtii:211

C0NRZ7              	100.00%		A8IYI0              	100.00%
Bootstrap support for C0NRZ7 as seed ortholog is 100%.
Bootstrap support for A8IYI0 as seed ortholog is 100%.

Group of orthologs #704. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:211 C.reinhardtii:211

C0NCN6              	100.00%		Q6V9B3              	100.00%
Bootstrap support for C0NCN6 as seed ortholog is 100%.
Bootstrap support for Q6V9B3 as seed ortholog is 100%.

Group of orthologs #705. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:211 C.reinhardtii:211

C0NUM5              	100.00%		A8JAY5              	100.00%
Bootstrap support for C0NUM5 as seed ortholog is 100%.
Bootstrap support for A8JAY5 as seed ortholog is 100%.

Group of orthologs #706. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:115 C.reinhardtii:211

C0NWB4              	100.00%		A8JAW4              	100.00%
Bootstrap support for C0NWB4 as seed ortholog is 99%.
Bootstrap support for A8JAW4 as seed ortholog is 100%.

Group of orthologs #707. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:119 C.reinhardtii:68

C0NRL0              	100.00%		A8JGI0              	100.00%
Bootstrap support for C0NRL0 as seed ortholog is 100%.
Bootstrap support for A8JGI0 as seed ortholog is 99%.

Group of orthologs #708. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:159 C.reinhardtii:114

C0NYU7              	100.00%		A8JGJ7              	100.00%
Bootstrap support for C0NYU7 as seed ortholog is 99%.
Bootstrap support for A8JGJ7 as seed ortholog is 96%.

Group of orthologs #709. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:210 C.reinhardtii:210

C0NB90              	100.00%		A8HYQ9              	100.00%
C0P1F3              	45.04%		
Bootstrap support for C0NB90 as seed ortholog is 100%.
Bootstrap support for A8HYQ9 as seed ortholog is 100%.

Group of orthologs #710. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:210 C.reinhardtii:49

C0NRD4              	100.00%		A8JEC6              	100.00%
C0NCD1              	21.99%		
Bootstrap support for C0NRD4 as seed ortholog is 100%.
Bootstrap support for A8JEC6 as seed ortholog is 81%.

Group of orthologs #711. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:210 C.reinhardtii:210

C0NVE6              	100.00%		A8HSU7              	100.00%
Bootstrap support for C0NVE6 as seed ortholog is 100%.
Bootstrap support for A8HSU7 as seed ortholog is 100%.

Group of orthologs #712. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:210 C.reinhardtii:162

C0NBF4              	100.00%		A8J9W0              	100.00%
Bootstrap support for C0NBF4 as seed ortholog is 100%.
Bootstrap support for A8J9W0 as seed ortholog is 100%.

Group of orthologs #713. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:210 C.reinhardtii:73

C0NE84              	100.00%		A8JEL2              	100.00%
Bootstrap support for C0NE84 as seed ortholog is 100%.
Bootstrap support for A8JEL2 as seed ortholog is 99%.

Group of orthologs #714. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:210 C.reinhardtii:210

C0NZI1              	100.00%		A8IWT5              	100.00%
Bootstrap support for C0NZI1 as seed ortholog is 100%.
Bootstrap support for A8IWT5 as seed ortholog is 100%.

Group of orthologs #715. Best score 209 bits
Score difference with first non-orthologous sequence - A.capsulata:209 C.reinhardtii:209

C0NCG7              	100.00%		A8IJQ1              	100.00%
Bootstrap support for C0NCG7 as seed ortholog is 100%.
Bootstrap support for A8IJQ1 as seed ortholog is 100%.

Group of orthologs #716. Best score 209 bits
Score difference with first non-orthologous sequence - A.capsulata:123 C.reinhardtii:121

C0NS69              	100.00%		A8HQ87              	100.00%
Bootstrap support for C0NS69 as seed ortholog is 100%.
Bootstrap support for A8HQ87 as seed ortholog is 100%.

Group of orthologs #717. Best score 209 bits
Score difference with first non-orthologous sequence - A.capsulata:209 C.reinhardtii:209

C0NBZ5              	100.00%		A8J5F4              	100.00%
Bootstrap support for C0NBZ5 as seed ortholog is 100%.
Bootstrap support for A8J5F4 as seed ortholog is 100%.

Group of orthologs #718. Best score 209 bits
Score difference with first non-orthologous sequence - A.capsulata:209 C.reinhardtii:209

C0NID8              	100.00%		A8J2J9              	100.00%
Bootstrap support for C0NID8 as seed ortholog is 100%.
Bootstrap support for A8J2J9 as seed ortholog is 100%.

Group of orthologs #719. Best score 209 bits
Score difference with first non-orthologous sequence - A.capsulata:209 C.reinhardtii:209

C0NT74              	100.00%		A8JEP4              	100.00%
Bootstrap support for C0NT74 as seed ortholog is 100%.
Bootstrap support for A8JEP4 as seed ortholog is 100%.

Group of orthologs #720. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:55 C.reinhardtii:45

C0NFF4              	100.00%		A8I7C5              	100.00%
C0NLL6              	14.58%		
Bootstrap support for C0NFF4 as seed ortholog is 93%.
Bootstrap support for A8I7C5 as seed ortholog is 90%.

Group of orthologs #721. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:208 C.reinhardtii:208

C0NH47              	100.00%		A8HUT2              	100.00%
Bootstrap support for C0NH47 as seed ortholog is 100%.
Bootstrap support for A8HUT2 as seed ortholog is 100%.

Group of orthologs #722. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:208 C.reinhardtii:208

C0NAI3              	100.00%		A8IZH0              	100.00%
Bootstrap support for C0NAI3 as seed ortholog is 100%.
Bootstrap support for A8IZH0 as seed ortholog is 100%.

Group of orthologs #723. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:208 C.reinhardtii:208

C0NB46              	100.00%		A8J131              	100.00%
Bootstrap support for C0NB46 as seed ortholog is 100%.
Bootstrap support for A8J131 as seed ortholog is 100%.

Group of orthologs #724. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:208 C.reinhardtii:208

C0NFV8              	100.00%		A8J493              	100.00%
Bootstrap support for C0NFV8 as seed ortholog is 100%.
Bootstrap support for A8J493 as seed ortholog is 100%.

Group of orthologs #725. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:5 C.reinhardtii:61

C0NLJ3              	100.00%		A8J0B6              	100.00%
Bootstrap support for C0NLJ3 as seed ortholog is 56%.
Alternative seed ortholog is C0NJI7 (5 bits away from this cluster)
Bootstrap support for A8J0B6 as seed ortholog is 95%.

Group of orthologs #726. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:77 C.reinhardtii:70

C0NUK0              	100.00%		A8J6A0              	100.00%
Bootstrap support for C0NUK0 as seed ortholog is 100%.
Bootstrap support for A8J6A0 as seed ortholog is 98%.

Group of orthologs #727. Best score 206 bits
Score difference with first non-orthologous sequence - A.capsulata:206 C.reinhardtii:206

C0NF78              	100.00%		A8J6L8              	100.00%
Bootstrap support for C0NF78 as seed ortholog is 100%.
Bootstrap support for A8J6L8 as seed ortholog is 100%.

Group of orthologs #728. Best score 206 bits
Score difference with first non-orthologous sequence - A.capsulata:206 C.reinhardtii:206

C0NNC4              	100.00%		A8JB59              	100.00%
Bootstrap support for C0NNC4 as seed ortholog is 100%.
Bootstrap support for A8JB59 as seed ortholog is 100%.

Group of orthologs #729. Best score 205 bits
Score difference with first non-orthologous sequence - A.capsulata:205 C.reinhardtii:205

C0NW27              	100.00%		A8J000              	100.00%
                    	       		A8IR49              	56.42%
Bootstrap support for C0NW27 as seed ortholog is 100%.
Bootstrap support for A8J000 as seed ortholog is 100%.

Group of orthologs #730. Best score 205 bits
Score difference with first non-orthologous sequence - A.capsulata:205 C.reinhardtii:205

C0NFH2              	100.00%		A8HQT5              	100.00%
Bootstrap support for C0NFH2 as seed ortholog is 100%.
Bootstrap support for A8HQT5 as seed ortholog is 100%.

Group of orthologs #731. Best score 205 bits
Score difference with first non-orthologous sequence - A.capsulata:205 C.reinhardtii:116

C0NRV7              	100.00%		A8I5H6              	100.00%
Bootstrap support for C0NRV7 as seed ortholog is 100%.
Bootstrap support for A8I5H6 as seed ortholog is 99%.

Group of orthologs #732. Best score 205 bits
Score difference with first non-orthologous sequence - A.capsulata:205 C.reinhardtii:205

C0NRX0              	100.00%		A8IHL3              	100.00%
Bootstrap support for C0NRX0 as seed ortholog is 100%.
Bootstrap support for A8IHL3 as seed ortholog is 100%.

Group of orthologs #733. Best score 205 bits
Score difference with first non-orthologous sequence - A.capsulata:205 C.reinhardtii:205

C0NFA2              	100.00%		A8J9U3              	100.00%
Bootstrap support for C0NFA2 as seed ortholog is 100%.
Bootstrap support for A8J9U3 as seed ortholog is 100%.

Group of orthologs #734. Best score 204 bits
Score difference with first non-orthologous sequence - A.capsulata:204 C.reinhardtii:204

C0NFD3              	100.00%		Q5S7Y5              	100.00%
Bootstrap support for C0NFD3 as seed ortholog is 100%.
Bootstrap support for Q5S7Y5 as seed ortholog is 100%.

Group of orthologs #735. Best score 204 bits
Score difference with first non-orthologous sequence - A.capsulata:204 C.reinhardtii:204

C0P059              	100.00%		A8JAN2              	100.00%
Bootstrap support for C0P059 as seed ortholog is 100%.
Bootstrap support for A8JAN2 as seed ortholog is 100%.

Group of orthologs #736. Best score 203 bits
Score difference with first non-orthologous sequence - A.capsulata:203 C.reinhardtii:203

C0NBZ0              	100.00%		Q19VH4              	100.00%
                    	       		Q19VH5              	93.14%
                    	       		A8I0H0              	48.53%
                    	       		A8I0G7              	21.08%
Bootstrap support for C0NBZ0 as seed ortholog is 100%.
Bootstrap support for Q19VH4 as seed ortholog is 100%.

Group of orthologs #737. Best score 203 bits
Score difference with first non-orthologous sequence - A.capsulata:203 C.reinhardtii:203

C0NL12              	100.00%		A8IB12              	100.00%
Bootstrap support for C0NL12 as seed ortholog is 100%.
Bootstrap support for A8IB12 as seed ortholog is 100%.

Group of orthologs #738. Best score 203 bits
Score difference with first non-orthologous sequence - A.capsulata:203 C.reinhardtii:203

C0NEP3              	100.00%		A8JE07              	100.00%
Bootstrap support for C0NEP3 as seed ortholog is 100%.
Bootstrap support for A8JE07 as seed ortholog is 100%.

Group of orthologs #739. Best score 203 bits
Score difference with first non-orthologous sequence - A.capsulata:146 C.reinhardtii:203

C0NZL1              	100.00%		A8J977              	100.00%
Bootstrap support for C0NZL1 as seed ortholog is 99%.
Bootstrap support for A8J977 as seed ortholog is 100%.

Group of orthologs #740. Best score 202 bits
Score difference with first non-orthologous sequence - A.capsulata:202 C.reinhardtii:202

C0NQ86              	100.00%		A8I4H4              	100.00%
Bootstrap support for C0NQ86 as seed ortholog is 100%.
Bootstrap support for A8I4H4 as seed ortholog is 100%.

Group of orthologs #741. Best score 202 bits
Score difference with first non-orthologous sequence - A.capsulata:202 C.reinhardtii:202

C0NXS9              	100.00%		A8IZE1              	100.00%
Bootstrap support for C0NXS9 as seed ortholog is 100%.
Bootstrap support for A8IZE1 as seed ortholog is 100%.

Group of orthologs #742. Best score 201 bits
Score difference with first non-orthologous sequence - A.capsulata:201 C.reinhardtii:201

C0NJ52              	100.00%		A8HVL0              	100.00%
Bootstrap support for C0NJ52 as seed ortholog is 100%.
Bootstrap support for A8HVL0 as seed ortholog is 100%.

Group of orthologs #743. Best score 201 bits
Score difference with first non-orthologous sequence - A.capsulata:201 C.reinhardtii:201

C0NP76              	100.00%		A8I029              	100.00%
Bootstrap support for C0NP76 as seed ortholog is 100%.
Bootstrap support for A8I029 as seed ortholog is 100%.

Group of orthologs #744. Best score 201 bits
Score difference with first non-orthologous sequence - A.capsulata:201 C.reinhardtii:201

C0NG66              	100.00%		A8J6I6              	100.00%
Bootstrap support for C0NG66 as seed ortholog is 100%.
Bootstrap support for A8J6I6 as seed ortholog is 100%.

Group of orthologs #745. Best score 201 bits
Score difference with first non-orthologous sequence - A.capsulata:201 C.reinhardtii:201

C0NG13              	100.00%		A8J7U7              	100.00%
Bootstrap support for C0NG13 as seed ortholog is 100%.
Bootstrap support for A8J7U7 as seed ortholog is 100%.

Group of orthologs #746. Best score 201 bits
Score difference with first non-orthologous sequence - A.capsulata:201 C.reinhardtii:201

C0NUK1              	100.00%		A8IZL5              	100.00%
Bootstrap support for C0NUK1 as seed ortholog is 100%.
Bootstrap support for A8IZL5 as seed ortholog is 100%.

Group of orthologs #747. Best score 201 bits
Score difference with first non-orthologous sequence - A.capsulata:201 C.reinhardtii:201

C0NW85              	100.00%		A8J593              	100.00%
Bootstrap support for C0NW85 as seed ortholog is 100%.
Bootstrap support for A8J593 as seed ortholog is 100%.

Group of orthologs #748. Best score 200 bits
Score difference with first non-orthologous sequence - A.capsulata:89 C.reinhardtii:83

C0NGH2              	100.00%		A8IT08              	100.00%
                    	       		O24451              	94.93%
Bootstrap support for C0NGH2 as seed ortholog is 98%.
Bootstrap support for A8IT08 as seed ortholog is 99%.

Group of orthologs #749. Best score 200 bits
Score difference with first non-orthologous sequence - A.capsulata:200 C.reinhardtii:200

C0NTN5              	100.00%		A8J9H8              	100.00%
                    	       		A8JH12              	14.81%
Bootstrap support for C0NTN5 as seed ortholog is 100%.
Bootstrap support for A8J9H8 as seed ortholog is 100%.

Group of orthologs #750. Best score 200 bits
Score difference with first non-orthologous sequence - A.capsulata:44 C.reinhardtii:64

C0P165              	100.00%		A8J3X0              	100.00%
                    	       		A8IL00              	6.72%
Bootstrap support for C0P165 as seed ortholog is 83%.
Bootstrap support for A8J3X0 as seed ortholog is 95%.

Group of orthologs #751. Best score 200 bits
Score difference with first non-orthologous sequence - A.capsulata:42 C.reinhardtii:125

C0NV05              	100.00%		A8I9B0              	100.00%
Bootstrap support for C0NV05 as seed ortholog is 91%.
Bootstrap support for A8I9B0 as seed ortholog is 99%.

Group of orthologs #752. Best score 200 bits
Score difference with first non-orthologous sequence - A.capsulata:88 C.reinhardtii:29

C0NE86              	100.00%		A8J513              	100.00%
Bootstrap support for C0NE86 as seed ortholog is 97%.
Bootstrap support for A8J513 as seed ortholog is 56%.
Alternative seed ortholog is A2BCY1 (29 bits away from this cluster)

Group of orthologs #753. Best score 200 bits
Score difference with first non-orthologous sequence - A.capsulata:200 C.reinhardtii:200

C0NMI8              	100.00%		A8J3I4              	100.00%
Bootstrap support for C0NMI8 as seed ortholog is 100%.
Bootstrap support for A8J3I4 as seed ortholog is 100%.

Group of orthologs #754. Best score 199 bits
Score difference with first non-orthologous sequence - A.capsulata:199 C.reinhardtii:199

C0NA68              	100.00%		A8IV36              	100.00%
Bootstrap support for C0NA68 as seed ortholog is 100%.
Bootstrap support for A8IV36 as seed ortholog is 100%.

Group of orthologs #755. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:198 C.reinhardtii:76

C0NFV9              	100.00%		A8HYT0              	100.00%
Bootstrap support for C0NFV9 as seed ortholog is 100%.
Bootstrap support for A8HYT0 as seed ortholog is 96%.

Group of orthologs #756. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:198 C.reinhardtii:198

C0NEG2              	100.00%		A8IL60              	100.00%
Bootstrap support for C0NEG2 as seed ortholog is 100%.
Bootstrap support for A8IL60 as seed ortholog is 100%.

Group of orthologs #757. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:198 C.reinhardtii:198

C0NVD4              	100.00%		A8HT57              	100.00%
Bootstrap support for C0NVD4 as seed ortholog is 100%.
Bootstrap support for A8HT57 as seed ortholog is 100%.

Group of orthologs #758. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:198 C.reinhardtii:198

C0NQZ0              	100.00%		A8IHT5              	100.00%
Bootstrap support for C0NQZ0 as seed ortholog is 100%.
Bootstrap support for A8IHT5 as seed ortholog is 100%.

Group of orthologs #759. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:198 C.reinhardtii:198

C0NR38              	100.00%		A8IR74              	100.00%
Bootstrap support for C0NR38 as seed ortholog is 100%.
Bootstrap support for A8IR74 as seed ortholog is 100%.

Group of orthologs #760. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:43 C.reinhardtii:59

C0NEE4              	100.00%		A8J876              	100.00%
Bootstrap support for C0NEE4 as seed ortholog is 84%.
Bootstrap support for A8J876 as seed ortholog is 88%.

Group of orthologs #761. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:3 C.reinhardtii:72

C0NTV9              	100.00%		A8IYA3              	100.00%
Bootstrap support for C0NTV9 as seed ortholog is 56%.
Alternative seed ortholog is C0NWZ8 (3 bits away from this cluster)
Bootstrap support for A8IYA3 as seed ortholog is 99%.

Group of orthologs #762. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:198 C.reinhardtii:198

C0NJR2              	100.00%		A8JH28              	100.00%
Bootstrap support for C0NJR2 as seed ortholog is 100%.
Bootstrap support for A8JH28 as seed ortholog is 100%.

Group of orthologs #763. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:198 C.reinhardtii:198

C0NL37              	100.00%		A8JG68              	100.00%
Bootstrap support for C0NL37 as seed ortholog is 100%.
Bootstrap support for A8JG68 as seed ortholog is 100%.

Group of orthologs #764. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:198 C.reinhardtii:198

C0NPL7              	100.00%		A8JF38              	100.00%
Bootstrap support for C0NPL7 as seed ortholog is 100%.
Bootstrap support for A8JF38 as seed ortholog is 100%.

Group of orthologs #765. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:198 C.reinhardtii:198

C0NWG8              	100.00%		A8JBG7              	100.00%
Bootstrap support for C0NWG8 as seed ortholog is 100%.
Bootstrap support for A8JBG7 as seed ortholog is 100%.

Group of orthologs #766. Best score 197 bits
Score difference with first non-orthologous sequence - A.capsulata:133 C.reinhardtii:101

C0NJX8              	100.00%		A8HQU6              	100.00%
Bootstrap support for C0NJX8 as seed ortholog is 99%.
Bootstrap support for A8HQU6 as seed ortholog is 99%.

Group of orthologs #767. Best score 197 bits
Score difference with first non-orthologous sequence - A.capsulata:197 C.reinhardtii:197

C0NKT0              	100.00%		A8II11              	100.00%
Bootstrap support for C0NKT0 as seed ortholog is 100%.
Bootstrap support for A8II11 as seed ortholog is 100%.

Group of orthologs #768. Best score 197 bits
Score difference with first non-orthologous sequence - A.capsulata:197 C.reinhardtii:197

C0NZ53              	100.00%		A8IT69              	100.00%
Bootstrap support for C0NZ53 as seed ortholog is 100%.
Bootstrap support for A8IT69 as seed ortholog is 100%.

Group of orthologs #769. Best score 197 bits
Score difference with first non-orthologous sequence - A.capsulata:197 C.reinhardtii:197

C0NW29              	100.00%		A8JGI9              	100.00%
Bootstrap support for C0NW29 as seed ortholog is 100%.
Bootstrap support for A8JGI9 as seed ortholog is 100%.

Group of orthologs #770. Best score 197 bits
Score difference with first non-orthologous sequence - A.capsulata:76 C.reinhardtii:48

C0NYE4              	100.00%		A8JGY3              	100.00%
Bootstrap support for C0NYE4 as seed ortholog is 99%.
Bootstrap support for A8JGY3 as seed ortholog is 95%.

Group of orthologs #771. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:196 C.reinhardtii:105

C0NDE3              	100.00%		A8IS90              	100.00%
                    	       		A8J654              	6.41%
Bootstrap support for C0NDE3 as seed ortholog is 100%.
Bootstrap support for A8IS90 as seed ortholog is 99%.

Group of orthologs #772. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:66 C.reinhardtii:196

C0NRK3              	100.00%		A8JGU7              	100.00%
C0NCL0              	8.59%		
Bootstrap support for C0NRK3 as seed ortholog is 91%.
Bootstrap support for A8JGU7 as seed ortholog is 100%.

Group of orthologs #773. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:13 C.reinhardtii:107

C0NGP2              	100.00%		A8IT81              	100.00%
Bootstrap support for C0NGP2 as seed ortholog is 56%.
Alternative seed ortholog is C0NXC3 (13 bits away from this cluster)
Bootstrap support for A8IT81 as seed ortholog is 99%.

Group of orthologs #774. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:196 C.reinhardtii:196

C0NM64              	100.00%		A8IEP3              	100.00%
Bootstrap support for C0NM64 as seed ortholog is 100%.
Bootstrap support for A8IEP3 as seed ortholog is 100%.

Group of orthologs #775. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:196 C.reinhardtii:196

C0NQL9              	100.00%		A8I980              	100.00%
Bootstrap support for C0NQL9 as seed ortholog is 100%.
Bootstrap support for A8I980 as seed ortholog is 100%.

Group of orthologs #776. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:196 C.reinhardtii:196

C0NP82              	100.00%		A8IGJ8              	100.00%
Bootstrap support for C0NP82 as seed ortholog is 100%.
Bootstrap support for A8IGJ8 as seed ortholog is 100%.

Group of orthologs #777. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:117 C.reinhardtii:26

C0NIP9              	100.00%		A8J0P9              	100.00%
Bootstrap support for C0NIP9 as seed ortholog is 99%.
Bootstrap support for A8J0P9 as seed ortholog is 85%.

Group of orthologs #778. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:196 C.reinhardtii:196

C0NVF9              	100.00%		A8IYQ8              	100.00%
Bootstrap support for C0NVF9 as seed ortholog is 100%.
Bootstrap support for A8IYQ8 as seed ortholog is 100%.

Group of orthologs #779. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:195 C.reinhardtii:195

C0NRA6              	100.00%		A8ICF1              	100.00%
C0NBF0              	13.54%		
Bootstrap support for C0NRA6 as seed ortholog is 100%.
Bootstrap support for A8ICF1 as seed ortholog is 100%.

Group of orthologs #780. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:106 C.reinhardtii:64

C0NBP7              	100.00%		A8I0R6              	100.00%
Bootstrap support for C0NBP7 as seed ortholog is 99%.
Bootstrap support for A8I0R6 as seed ortholog is 98%.

Group of orthologs #781. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:195 C.reinhardtii:195

C0NGS3              	100.00%		A8HVU5              	100.00%
Bootstrap support for C0NGS3 as seed ortholog is 100%.
Bootstrap support for A8HVU5 as seed ortholog is 100%.

Group of orthologs #782. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:195 C.reinhardtii:103

C0P0E9              	100.00%		A8HNG4              	100.00%
Bootstrap support for C0P0E9 as seed ortholog is 100%.
Bootstrap support for A8HNG4 as seed ortholog is 99%.

Group of orthologs #783. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:139 C.reinhardtii:109

C0NNH9              	100.00%		A8INH7              	100.00%
Bootstrap support for C0NNH9 as seed ortholog is 99%.
Bootstrap support for A8INH7 as seed ortholog is 99%.

Group of orthologs #784. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:195 C.reinhardtii:195

C0NDY4              	100.00%		A8JH26              	100.00%
Bootstrap support for C0NDY4 as seed ortholog is 100%.
Bootstrap support for A8JH26 as seed ortholog is 100%.

Group of orthologs #785. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:195 C.reinhardtii:195

C0NQR6              	100.00%		A8JDP4              	100.00%
Bootstrap support for C0NQR6 as seed ortholog is 100%.
Bootstrap support for A8JDP4 as seed ortholog is 100%.

Group of orthologs #786. Best score 194 bits
Score difference with first non-orthologous sequence - A.capsulata:107 C.reinhardtii:78

C0NNY6              	100.00%		A8HM62              	100.00%
Bootstrap support for C0NNY6 as seed ortholog is 99%.
Bootstrap support for A8HM62 as seed ortholog is 99%.

Group of orthologs #787. Best score 194 bits
Score difference with first non-orthologous sequence - A.capsulata:194 C.reinhardtii:194

C0NN36              	100.00%		A8I320              	100.00%
Bootstrap support for C0NN36 as seed ortholog is 100%.
Bootstrap support for A8I320 as seed ortholog is 100%.

Group of orthologs #788. Best score 194 bits
Score difference with first non-orthologous sequence - A.capsulata:194 C.reinhardtii:194

C0NUP2              	100.00%		A8JBD9              	100.00%
Bootstrap support for C0NUP2 as seed ortholog is 100%.
Bootstrap support for A8JBD9 as seed ortholog is 100%.

Group of orthologs #789. Best score 193 bits
Score difference with first non-orthologous sequence - A.capsulata:107 C.reinhardtii:193

C0NII1              	100.00%		A8I4A8              	100.00%
Bootstrap support for C0NII1 as seed ortholog is 99%.
Bootstrap support for A8I4A8 as seed ortholog is 100%.

Group of orthologs #790. Best score 193 bits
Score difference with first non-orthologous sequence - A.capsulata:193 C.reinhardtii:193

C0NSX9              	100.00%		A8HPG2              	100.00%
Bootstrap support for C0NSX9 as seed ortholog is 100%.
Bootstrap support for A8HPG2 as seed ortholog is 100%.

Group of orthologs #791. Best score 193 bits
Score difference with first non-orthologous sequence - A.capsulata:193 C.reinhardtii:193

C0P069              	100.00%		A8I2G3              	100.00%
Bootstrap support for C0P069 as seed ortholog is 100%.
Bootstrap support for A8I2G3 as seed ortholog is 100%.

Group of orthologs #792. Best score 193 bits
Score difference with first non-orthologous sequence - A.capsulata:193 C.reinhardtii:193

C0NT47              	100.00%		A8J0Y7              	100.00%
Bootstrap support for C0NT47 as seed ortholog is 100%.
Bootstrap support for A8J0Y7 as seed ortholog is 100%.

Group of orthologs #793. Best score 192 bits
Score difference with first non-orthologous sequence - A.capsulata:192 C.reinhardtii:192

C0NMT1              	100.00%		A8I665              	100.00%
Bootstrap support for C0NMT1 as seed ortholog is 100%.
Bootstrap support for A8I665 as seed ortholog is 100%.

Group of orthologs #794. Best score 192 bits
Score difference with first non-orthologous sequence - A.capsulata:192 C.reinhardtii:192

C0NYD7              	100.00%		A8JB85              	100.00%
Bootstrap support for C0NYD7 as seed ortholog is 100%.
Bootstrap support for A8JB85 as seed ortholog is 100%.

Group of orthologs #795. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:191 C.reinhardtii:191

C0NCL3              	100.00%		Q8RUT6              	100.00%
                    	       		A8J1H0              	28.56%
                    	       		A8HSA2              	28.56%
                    	       		A8IUV9              	21.83%
                    	       		A8JFV7              	21.06%
                    	       		A8JFM1              	12.13%
                    	       		Q6QBS6              	10.03%
                    	       		Q6QBS7              	8.16%
Bootstrap support for C0NCL3 as seed ortholog is 100%.
Bootstrap support for Q8RUT6 as seed ortholog is 100%.

Group of orthologs #796. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:191 C.reinhardtii:20

C0ND92              	100.00%		A8HVA3              	100.00%
C0NL59              	85.71%		A8HSB0              	93.33%
                    	       		A8JJH1              	40.00%
                    	       		A8J9L9              	26.67%
                    	       		A8JIN9              	20.00%
Bootstrap support for C0ND92 as seed ortholog is 100%.
Bootstrap support for A8HVA3 as seed ortholog is 99%.

Group of orthologs #797. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:191 C.reinhardtii:191

C0NAK1              	100.00%		Q948T5              	100.00%
                    	       		A8IG47              	22.20%
                    	       		A8HVX7              	7.54%
Bootstrap support for C0NAK1 as seed ortholog is 100%.
Bootstrap support for Q948T5 as seed ortholog is 100%.

Group of orthologs #798. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:43 C.reinhardtii:191

C0NEK7              	100.00%		A8HYD8              	100.00%
Bootstrap support for C0NEK7 as seed ortholog is 82%.
Bootstrap support for A8HYD8 as seed ortholog is 100%.

Group of orthologs #799. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:191 C.reinhardtii:191

C0NAJ4              	100.00%		A8IWB0              	100.00%
Bootstrap support for C0NAJ4 as seed ortholog is 100%.
Bootstrap support for A8IWB0 as seed ortholog is 100%.

Group of orthologs #800. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:191 C.reinhardtii:191

C0NEZ0              	100.00%		A8IWV3              	100.00%
Bootstrap support for C0NEZ0 as seed ortholog is 100%.
Bootstrap support for A8IWV3 as seed ortholog is 100%.

Group of orthologs #801. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:191 C.reinhardtii:191

C0NH80              	100.00%		A8IW48              	100.00%
Bootstrap support for C0NH80 as seed ortholog is 100%.
Bootstrap support for A8IW48 as seed ortholog is 100%.

Group of orthologs #802. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:191 C.reinhardtii:191

C0NZM0              	100.00%		A8IZ68              	100.00%
Bootstrap support for C0NZM0 as seed ortholog is 100%.
Bootstrap support for A8IZ68 as seed ortholog is 100%.

Group of orthologs #803. Best score 190 bits
Score difference with first non-orthologous sequence - A.capsulata:46 C.reinhardtii:91

C0NQE5              	100.00%		A8JGH0              	100.00%
C0NP32              	39.59%		A8JGH3              	33.97%
C0NCM5              	16.10%		A8J1F3              	21.81%
                    	       		A8JGH2              	21.73%
                    	       		A8JGH4              	21.53%
Bootstrap support for C0NQE5 as seed ortholog is 83%.
Bootstrap support for A8JGH0 as seed ortholog is 94%.

Group of orthologs #804. Best score 190 bits
Score difference with first non-orthologous sequence - A.capsulata:190 C.reinhardtii:190

C0NE46              	100.00%		A8J9B2              	100.00%
Bootstrap support for C0NE46 as seed ortholog is 100%.
Bootstrap support for A8J9B2 as seed ortholog is 100%.

Group of orthologs #805. Best score 189 bits
Score difference with first non-orthologous sequence - A.capsulata:189 C.reinhardtii:189

C0NB16              	100.00%		A8J304              	100.00%
Bootstrap support for C0NB16 as seed ortholog is 100%.
Bootstrap support for A8J304 as seed ortholog is 100%.

Group of orthologs #806. Best score 189 bits
Score difference with first non-orthologous sequence - A.capsulata:94 C.reinhardtii:3

C0NJK6              	100.00%		A8IX31              	100.00%
Bootstrap support for C0NJK6 as seed ortholog is 99%.
Bootstrap support for A8IX31 as seed ortholog is 57%.
Alternative seed ortholog is A8JER8 (3 bits away from this cluster)

Group of orthologs #807. Best score 189 bits
Score difference with first non-orthologous sequence - A.capsulata:189 C.reinhardtii:189

C0NNH7              	100.00%		A8IZA4              	100.00%
Bootstrap support for C0NNH7 as seed ortholog is 100%.
Bootstrap support for A8IZA4 as seed ortholog is 100%.

Group of orthologs #808. Best score 189 bits
Score difference with first non-orthologous sequence - A.capsulata:189 C.reinhardtii:189

C0NJK5              	100.00%		Q8HTL2              	100.00%
Bootstrap support for C0NJK5 as seed ortholog is 100%.
Bootstrap support for Q8HTL2 as seed ortholog is 100%.

Group of orthologs #809. Best score 188 bits
Score difference with first non-orthologous sequence - A.capsulata:188 C.reinhardtii:80

C0NZ93              	100.00%		A8HSB5              	100.00%
                    	       		A8HWF6              	100.00%
                    	       		Q42680              	100.00%
                    	       		A8IR81              	98.44%
                    	       		A8HWM8              	97.10%
                    	       		A8JJE0              	71.88%
Bootstrap support for C0NZ93 as seed ortholog is 100%.
Bootstrap support for A8HSB5 as seed ortholog is 100%.
Bootstrap support for A8HWF6 as seed ortholog is 100%.
Bootstrap support for Q42680 as seed ortholog is 100%.

Group of orthologs #810. Best score 188 bits
Score difference with first non-orthologous sequence - A.capsulata:188 C.reinhardtii:188

C0NX45              	100.00%		A8HPN6              	100.00%
Bootstrap support for C0NX45 as seed ortholog is 100%.
Bootstrap support for A8HPN6 as seed ortholog is 100%.

Group of orthologs #811. Best score 188 bits
Score difference with first non-orthologous sequence - A.capsulata:100 C.reinhardtii:188

C0NFC4              	100.00%		A8J8G5              	100.00%
Bootstrap support for C0NFC4 as seed ortholog is 99%.
Bootstrap support for A8J8G5 as seed ortholog is 100%.

Group of orthologs #812. Best score 188 bits
Score difference with first non-orthologous sequence - A.capsulata:188 C.reinhardtii:188

C0NIE1              	100.00%		Q84JV7              	100.00%
Bootstrap support for C0NIE1 as seed ortholog is 100%.
Bootstrap support for Q84JV7 as seed ortholog is 100%.

Group of orthologs #813. Best score 188 bits
Score difference with first non-orthologous sequence - A.capsulata:12 C.reinhardtii:188

C0P033              	100.00%		A8JHB7              	100.00%
Bootstrap support for C0P033 as seed ortholog is 59%.
Alternative seed ortholog is C0NKN3 (12 bits away from this cluster)
Bootstrap support for A8JHB7 as seed ortholog is 100%.

Group of orthologs #814. Best score 187 bits
Score difference with first non-orthologous sequence - A.capsulata:84 C.reinhardtii:58

C0NBE1              	100.00%		A8HSJ3              	100.00%
                    	       		A8IPQ9              	19.80%
                    	       		A8IHF4              	19.07%
                    	       		A8I2U7              	17.24%
                    	       		A8J365              	14.43%
                    	       		A8JI59              	12.10%
                    	       		A8JD03              	11.98%
                    	       		A8IPF1              	9.54%
Bootstrap support for C0NBE1 as seed ortholog is 97%.
Bootstrap support for A8HSJ3 as seed ortholog is 90%.

Group of orthologs #815. Best score 187 bits
Score difference with first non-orthologous sequence - A.capsulata:109 C.reinhardtii:187

C0NJB4              	100.00%		A8IU79              	100.00%
Bootstrap support for C0NJB4 as seed ortholog is 99%.
Bootstrap support for A8IU79 as seed ortholog is 100%.

Group of orthologs #816. Best score 187 bits
Score difference with first non-orthologous sequence - A.capsulata:187 C.reinhardtii:22

C0NAK3              	100.00%		A8J5V8              	100.00%
Bootstrap support for C0NAK3 as seed ortholog is 100%.
Bootstrap support for A8J5V8 as seed ortholog is 82%.

Group of orthologs #817. Best score 186 bits
Score difference with first non-orthologous sequence - A.capsulata:186 C.reinhardtii:73

C0NID1              	100.00%		A8JAQ8              	100.00%
                    	       		A8JAR0              	42.37%
Bootstrap support for C0NID1 as seed ortholog is 100%.
Bootstrap support for A8JAQ8 as seed ortholog is 99%.

Group of orthologs #818. Best score 186 bits
Score difference with first non-orthologous sequence - A.capsulata:186 C.reinhardtii:186

C0NE27              	100.00%		A8ISQ2              	100.00%
Bootstrap support for C0NE27 as seed ortholog is 100%.
Bootstrap support for A8ISQ2 as seed ortholog is 100%.

Group of orthologs #819. Best score 186 bits
Score difference with first non-orthologous sequence - A.capsulata:115 C.reinhardtii:186

C0NFE5              	100.00%		A8J8Y6              	100.00%
Bootstrap support for C0NFE5 as seed ortholog is 99%.
Bootstrap support for A8J8Y6 as seed ortholog is 100%.

Group of orthologs #820. Best score 186 bits
Score difference with first non-orthologous sequence - A.capsulata:186 C.reinhardtii:186

C0NUS4              	100.00%		A8IZD4              	100.00%
Bootstrap support for C0NUS4 as seed ortholog is 100%.
Bootstrap support for A8IZD4 as seed ortholog is 100%.

Group of orthologs #821. Best score 186 bits
Score difference with first non-orthologous sequence - A.capsulata:68 C.reinhardtii:35

C0NGR4              	100.00%		Q6V8K6              	100.00%
Bootstrap support for C0NGR4 as seed ortholog is 99%.
Bootstrap support for Q6V8K6 as seed ortholog is 81%.

Group of orthologs #822. Best score 186 bits
Score difference with first non-orthologous sequence - A.capsulata:186 C.reinhardtii:186

C0NWA3              	100.00%		A8JDZ8              	100.00%
Bootstrap support for C0NWA3 as seed ortholog is 100%.
Bootstrap support for A8JDZ8 as seed ortholog is 100%.

Group of orthologs #823. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 C.reinhardtii:185

C0NC23              	100.00%		A8ISK5              	100.00%
Bootstrap support for C0NC23 as seed ortholog is 100%.
Bootstrap support for A8ISK5 as seed ortholog is 100%.

Group of orthologs #824. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:11 C.reinhardtii:185

C0NC95              	100.00%		A8J6J0              	100.00%
Bootstrap support for C0NC95 as seed ortholog is 61%.
Alternative seed ortholog is C0NPZ3 (11 bits away from this cluster)
Bootstrap support for A8J6J0 as seed ortholog is 100%.

Group of orthologs #825. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 C.reinhardtii:185

C0NPH5              	100.00%		A8J588              	100.00%
Bootstrap support for C0NPH5 as seed ortholog is 100%.
Bootstrap support for A8J588 as seed ortholog is 100%.

Group of orthologs #826. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 C.reinhardtii:94

C0P118              	100.00%		A8JGY1              	100.00%
Bootstrap support for C0P118 as seed ortholog is 100%.
Bootstrap support for A8JGY1 as seed ortholog is 99%.

Group of orthologs #827. Best score 184 bits
Score difference with first non-orthologous sequence - A.capsulata:32 C.reinhardtii:184

C0NQG3              	100.00%		A8I7X6              	100.00%
                    	       		A8I5J8              	18.77%
Bootstrap support for C0NQG3 as seed ortholog is 79%.
Bootstrap support for A8I7X6 as seed ortholog is 100%.

Group of orthologs #828. Best score 184 bits
Score difference with first non-orthologous sequence - A.capsulata:184 C.reinhardtii:184

C0NWW7              	100.00%		A8J1X5              	100.00%
                    	       		A8IVY4              	13.52%
Bootstrap support for C0NWW7 as seed ortholog is 100%.
Bootstrap support for A8J1X5 as seed ortholog is 100%.

Group of orthologs #829. Best score 184 bits
Score difference with first non-orthologous sequence - A.capsulata:184 C.reinhardtii:184

C0NR87              	100.00%		A8HVT9              	100.00%
Bootstrap support for C0NR87 as seed ortholog is 100%.
Bootstrap support for A8HVT9 as seed ortholog is 100%.

Group of orthologs #830. Best score 184 bits
Score difference with first non-orthologous sequence - A.capsulata:184 C.reinhardtii:184

C0NYX0              	100.00%		A8I1Q7              	100.00%
Bootstrap support for C0NYX0 as seed ortholog is 100%.
Bootstrap support for A8I1Q7 as seed ortholog is 100%.

Group of orthologs #831. Best score 184 bits
Score difference with first non-orthologous sequence - A.capsulata:184 C.reinhardtii:184

C0P0U7              	100.00%		A8I0J4              	100.00%
Bootstrap support for C0P0U7 as seed ortholog is 100%.
Bootstrap support for A8I0J4 as seed ortholog is 100%.

Group of orthologs #832. Best score 184 bits
Score difference with first non-orthologous sequence - A.capsulata:184 C.reinhardtii:55

C0NQ19              	100.00%		A8IZV8              	100.00%
Bootstrap support for C0NQ19 as seed ortholog is 100%.
Bootstrap support for A8IZV8 as seed ortholog is 99%.

Group of orthologs #833. Best score 183 bits
Score difference with first non-orthologous sequence - A.capsulata:183 C.reinhardtii:59

C0NL40              	100.00%		A8I7J8              	100.00%
Bootstrap support for C0NL40 as seed ortholog is 100%.
Bootstrap support for A8I7J8 as seed ortholog is 99%.

Group of orthologs #834. Best score 183 bits
Score difference with first non-orthologous sequence - A.capsulata:183 C.reinhardtii:183

C0NKA0              	100.00%		A8J3Q6              	100.00%
Bootstrap support for C0NKA0 as seed ortholog is 100%.
Bootstrap support for A8J3Q6 as seed ortholog is 100%.

Group of orthologs #835. Best score 183 bits
Score difference with first non-orthologous sequence - A.capsulata:183 C.reinhardtii:183

C0NKR5              	100.00%		A8JB76              	100.00%
Bootstrap support for C0NKR5 as seed ortholog is 100%.
Bootstrap support for A8JB76 as seed ortholog is 100%.

Group of orthologs #836. Best score 183 bits
Score difference with first non-orthologous sequence - A.capsulata:183 C.reinhardtii:183

C0NMX9              	100.00%		A8JAL7              	100.00%
Bootstrap support for C0NMX9 as seed ortholog is 100%.
Bootstrap support for A8JAL7 as seed ortholog is 100%.

Group of orthologs #837. Best score 183 bits
Score difference with first non-orthologous sequence - A.capsulata:183 C.reinhardtii:183

C0P0G8              	100.00%		A8JAP4              	100.00%
Bootstrap support for C0P0G8 as seed ortholog is 100%.
Bootstrap support for A8JAP4 as seed ortholog is 100%.

Group of orthologs #838. Best score 182 bits
Score difference with first non-orthologous sequence - A.capsulata:182 C.reinhardtii:182

C0NQS8              	100.00%		A8HMY5              	100.00%
                    	       		A8HMX6              	29.25%
Bootstrap support for C0NQS8 as seed ortholog is 100%.
Bootstrap support for A8HMY5 as seed ortholog is 100%.

Group of orthologs #839. Best score 182 bits
Score difference with first non-orthologous sequence - A.capsulata:182 C.reinhardtii:182

C0NS11              	100.00%		A8JDC7              	100.00%
                    	       		A8JDC6              	43.06%
Bootstrap support for C0NS11 as seed ortholog is 100%.
Bootstrap support for A8JDC7 as seed ortholog is 100%.

Group of orthologs #840. Best score 182 bits
Score difference with first non-orthologous sequence - A.capsulata:182 C.reinhardtii:182

C0NDD9              	100.00%		A8J0C5              	100.00%
Bootstrap support for C0NDD9 as seed ortholog is 100%.
Bootstrap support for A8J0C5 as seed ortholog is 100%.

Group of orthologs #841. Best score 182 bits
Score difference with first non-orthologous sequence - A.capsulata:182 C.reinhardtii:182

C0NUF8              	100.00%		A8IIC7              	100.00%
Bootstrap support for C0NUF8 as seed ortholog is 100%.
Bootstrap support for A8IIC7 as seed ortholog is 100%.

Group of orthologs #842. Best score 182 bits
Score difference with first non-orthologous sequence - A.capsulata:182 C.reinhardtii:182

C0NM17              	100.00%		A8J4E2              	100.00%
Bootstrap support for C0NM17 as seed ortholog is 100%.
Bootstrap support for A8J4E2 as seed ortholog is 100%.

Group of orthologs #843. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:35 C.reinhardtii:119

C0NBR7              	100.00%		A7UCH9              	100.00%
                    	       		A8JB12              	38.01%
Bootstrap support for C0NBR7 as seed ortholog is 89%.
Bootstrap support for A7UCH9 as seed ortholog is 99%.

Group of orthologs #844. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 C.reinhardtii:25

C0NYR8              	100.00%		A8HQL6              	100.00%
                    	       		A8JH17              	6.86%
Bootstrap support for C0NYR8 as seed ortholog is 100%.
Bootstrap support for A8HQL6 as seed ortholog is 74%.
Alternative seed ortholog is A8IBE0 (25 bits away from this cluster)

Group of orthologs #845. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 C.reinhardtii:23

C0NC13              	100.00%		A8IC82              	100.00%
Bootstrap support for C0NC13 as seed ortholog is 100%.
Bootstrap support for A8IC82 as seed ortholog is 74%.
Alternative seed ortholog is A8IHG6 (23 bits away from this cluster)

Group of orthologs #846. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 C.reinhardtii:181

C0NIB6              	100.00%		A8IN82              	100.00%
Bootstrap support for C0NIB6 as seed ortholog is 100%.
Bootstrap support for A8IN82 as seed ortholog is 100%.

Group of orthologs #847. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:7 C.reinhardtii:124

C0NIF9              	100.00%		A8IX73              	100.00%
Bootstrap support for C0NIF9 as seed ortholog is 50%.
Alternative seed ortholog is C0NPR1 (7 bits away from this cluster)
Bootstrap support for A8IX73 as seed ortholog is 99%.

Group of orthologs #848. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 C.reinhardtii:181

C0NZL2              	100.00%		A8IAT4              	100.00%
Bootstrap support for C0NZL2 as seed ortholog is 100%.
Bootstrap support for A8IAT4 as seed ortholog is 100%.

Group of orthologs #849. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 C.reinhardtii:85

C0NCC8              	100.00%		A8JDZ2              	100.00%
Bootstrap support for C0NCC8 as seed ortholog is 100%.
Bootstrap support for A8JDZ2 as seed ortholog is 99%.

Group of orthologs #850. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:97 C.reinhardtii:113

C0NQP9              	100.00%		A8IZG4              	100.00%
Bootstrap support for C0NQP9 as seed ortholog is 96%.
Bootstrap support for A8IZG4 as seed ortholog is 98%.

Group of orthologs #851. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 C.reinhardtii:181

C0NZE5              	100.00%		A8ITA7              	100.00%
Bootstrap support for C0NZE5 as seed ortholog is 100%.
Bootstrap support for A8ITA7 as seed ortholog is 100%.

Group of orthologs #852. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 C.reinhardtii:181

C0NTP9              	100.00%		Q5K1Y0              	100.00%
Bootstrap support for C0NTP9 as seed ortholog is 100%.
Bootstrap support for Q5K1Y0 as seed ortholog is 100%.

Group of orthologs #853. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:180 C.reinhardtii:180

C0NCN1              	100.00%		A8HNB9              	100.00%
Bootstrap support for C0NCN1 as seed ortholog is 100%.
Bootstrap support for A8HNB9 as seed ortholog is 100%.

Group of orthologs #854. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:26 C.reinhardtii:69

C0ND57              	100.00%		A8HQK6              	100.00%
Bootstrap support for C0ND57 as seed ortholog is 80%.
Bootstrap support for A8HQK6 as seed ortholog is 84%.

Group of orthologs #855. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:180 C.reinhardtii:31

C0NA61              	100.00%		A8INA5              	100.00%
Bootstrap support for C0NA61 as seed ortholog is 100%.
Bootstrap support for A8INA5 as seed ortholog is 73%.
Alternative seed ortholog is A8I0G0 (31 bits away from this cluster)

Group of orthologs #856. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:180 C.reinhardtii:180

C0NCE5              	100.00%		A8J308              	100.00%
Bootstrap support for C0NCE5 as seed ortholog is 100%.
Bootstrap support for A8J308 as seed ortholog is 100%.

Group of orthologs #857. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:180 C.reinhardtii:180

C0NBT0              	100.00%		A8JH92              	100.00%
Bootstrap support for C0NBT0 as seed ortholog is 100%.
Bootstrap support for A8JH92 as seed ortholog is 100%.

Group of orthologs #858. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:180 C.reinhardtii:56

C0P081              	100.00%		A8J8T9              	100.00%
Bootstrap support for C0P081 as seed ortholog is 100%.
Bootstrap support for A8J8T9 as seed ortholog is 95%.

Group of orthologs #859. Best score 179 bits
Score difference with first non-orthologous sequence - A.capsulata:124 C.reinhardtii:84

C0NYZ9              	100.00%		A8HM32              	100.00%
Bootstrap support for C0NYZ9 as seed ortholog is 99%.
Bootstrap support for A8HM32 as seed ortholog is 97%.

Group of orthologs #860. Best score 179 bits
Score difference with first non-orthologous sequence - A.capsulata:179 C.reinhardtii:179

C0P041              	100.00%		A8J888              	100.00%
Bootstrap support for C0P041 as seed ortholog is 100%.
Bootstrap support for A8J888 as seed ortholog is 100%.

Group of orthologs #861. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:178 C.reinhardtii:178

C0NGD0              	100.00%		A8JHP2              	100.00%
                    	       		A8J6T0              	23.82%
Bootstrap support for C0NGD0 as seed ortholog is 100%.
Bootstrap support for A8JHP2 as seed ortholog is 100%.

Group of orthologs #862. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:178 C.reinhardtii:178

C0NFM0              	100.00%		A8IU94              	100.00%
Bootstrap support for C0NFM0 as seed ortholog is 100%.
Bootstrap support for A8IU94 as seed ortholog is 100%.

Group of orthologs #863. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:178 C.reinhardtii:178

C0NJ96              	100.00%		A8J591              	100.00%
Bootstrap support for C0NJ96 as seed ortholog is 100%.
Bootstrap support for A8J591 as seed ortholog is 100%.

Group of orthologs #864. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:102 C.reinhardtii:119

C0NNW7              	100.00%		A8JA68              	100.00%
Bootstrap support for C0NNW7 as seed ortholog is 98%.
Bootstrap support for A8JA68 as seed ortholog is 99%.

Group of orthologs #865. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:178 C.reinhardtii:178

C0NDU7              	100.00%		Q9ATG8              	100.00%
Bootstrap support for C0NDU7 as seed ortholog is 100%.
Bootstrap support for Q9ATG8 as seed ortholog is 100%.

Group of orthologs #866. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:178 C.reinhardtii:66

C0NQU3              	100.00%		A8JBD8              	100.00%
Bootstrap support for C0NQU3 as seed ortholog is 100%.
Bootstrap support for A8JBD8 as seed ortholog is 98%.

Group of orthologs #867. Best score 177 bits
Score difference with first non-orthologous sequence - A.capsulata:177 C.reinhardtii:37

C0NFT8              	100.00%		A8JFB1              	100.00%
Bootstrap support for C0NFT8 as seed ortholog is 100%.
Bootstrap support for A8JFB1 as seed ortholog is 91%.

Group of orthologs #868. Best score 177 bits
Score difference with first non-orthologous sequence - A.capsulata:177 C.reinhardtii:177

C0NWC5              	100.00%		A8JED2              	100.00%
Bootstrap support for C0NWC5 as seed ortholog is 100%.
Bootstrap support for A8JED2 as seed ortholog is 100%.

Group of orthologs #869. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:176 C.reinhardtii:176

C0NI55              	100.00%		Q70ZL8              	100.00%
C0NJZ8              	44.97%		A8J0K1              	78.18%
Bootstrap support for C0NI55 as seed ortholog is 100%.
Bootstrap support for Q70ZL8 as seed ortholog is 100%.

Group of orthologs #870. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:176 C.reinhardtii:176

C0NG63              	100.00%		A8HPU0              	100.00%
Bootstrap support for C0NG63 as seed ortholog is 100%.
Bootstrap support for A8HPU0 as seed ortholog is 100%.

Group of orthologs #871. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:176 C.reinhardtii:176

C0NUA6              	100.00%		A8JBW7              	100.00%
Bootstrap support for C0NUA6 as seed ortholog is 100%.
Bootstrap support for A8JBW7 as seed ortholog is 100%.

Group of orthologs #872. Best score 175 bits
Score difference with first non-orthologous sequence - A.capsulata:34 C.reinhardtii:110

C0NU37              	100.00%		A8INA8              	100.00%
C0NFW8              	7.91%		
Bootstrap support for C0NU37 as seed ortholog is 86%.
Bootstrap support for A8INA8 as seed ortholog is 99%.

Group of orthologs #873. Best score 175 bits
Score difference with first non-orthologous sequence - A.capsulata:104 C.reinhardtii:175

C0P0U8              	100.00%		A8JCI5              	100.00%
C0NTK0              	25.29%		
Bootstrap support for C0P0U8 as seed ortholog is 99%.
Bootstrap support for A8JCI5 as seed ortholog is 100%.

Group of orthologs #874. Best score 175 bits
Score difference with first non-orthologous sequence - A.capsulata:175 C.reinhardtii:175

C0NB30              	100.00%		A8ITV6              	100.00%
Bootstrap support for C0NB30 as seed ortholog is 100%.
Bootstrap support for A8ITV6 as seed ortholog is 100%.

Group of orthologs #875. Best score 175 bits
Score difference with first non-orthologous sequence - A.capsulata:53 C.reinhardtii:89

C0NB00              	100.00%		A8J3I5              	100.00%
Bootstrap support for C0NB00 as seed ortholog is 91%.
Bootstrap support for A8J3I5 as seed ortholog is 99%.

Group of orthologs #876. Best score 175 bits
Score difference with first non-orthologous sequence - A.capsulata:175 C.reinhardtii:56

C0NC54              	100.00%		A8JDV9              	100.00%
Bootstrap support for C0NC54 as seed ortholog is 100%.
Bootstrap support for A8JDV9 as seed ortholog is 91%.

Group of orthologs #877. Best score 175 bits
Score difference with first non-orthologous sequence - A.capsulata:175 C.reinhardtii:175

C0NSS2              	100.00%		A8J426              	100.00%
Bootstrap support for C0NSS2 as seed ortholog is 100%.
Bootstrap support for A8J426 as seed ortholog is 100%.

Group of orthologs #878. Best score 174 bits
Score difference with first non-orthologous sequence - A.capsulata:174 C.reinhardtii:174

C0NP54              	100.00%		A8HMC7              	100.00%
C0NDA3              	14.93%		A8J1N2              	7.71%
C0NLZ5              	11.23%		A8J6W6              	6.67%
Bootstrap support for C0NP54 as seed ortholog is 100%.
Bootstrap support for A8HMC7 as seed ortholog is 100%.

Group of orthologs #879. Best score 174 bits
Score difference with first non-orthologous sequence - A.capsulata:174 C.reinhardtii:43

C0NLA7              	100.00%		A8I424              	100.00%
                    	       		A8IFX8              	44.67%
                    	       		A8J502              	40.16%
                    	       		A8IZ39              	24.59%
Bootstrap support for C0NLA7 as seed ortholog is 100%.
Bootstrap support for A8I424 as seed ortholog is 93%.

Group of orthologs #880. Best score 174 bits
Score difference with first non-orthologous sequence - A.capsulata:174 C.reinhardtii:174

C0NSQ8              	100.00%		A8JD32              	100.00%
Bootstrap support for C0NSQ8 as seed ortholog is 100%.
Bootstrap support for A8JD32 as seed ortholog is 100%.

Group of orthologs #881. Best score 173 bits
Score difference with first non-orthologous sequence - A.capsulata:173 C.reinhardtii:173

C0NHB9              	100.00%		A8HP30              	100.00%
Bootstrap support for C0NHB9 as seed ortholog is 100%.
Bootstrap support for A8HP30 as seed ortholog is 100%.

Group of orthologs #882. Best score 173 bits
Score difference with first non-orthologous sequence - A.capsulata:173 C.reinhardtii:173

C0NLE3              	100.00%		A8HSS0              	100.00%
Bootstrap support for C0NLE3 as seed ortholog is 100%.
Bootstrap support for A8HSS0 as seed ortholog is 100%.

Group of orthologs #883. Best score 173 bits
Score difference with first non-orthologous sequence - A.capsulata:173 C.reinhardtii:173

C0NMD1              	100.00%		A8HZ94              	100.00%
Bootstrap support for C0NMD1 as seed ortholog is 100%.
Bootstrap support for A8HZ94 as seed ortholog is 100%.

Group of orthologs #884. Best score 173 bits
Score difference with first non-orthologous sequence - A.capsulata:173 C.reinhardtii:173

C0NSS1              	100.00%		A8I297              	100.00%
Bootstrap support for C0NSS1 as seed ortholog is 100%.
Bootstrap support for A8I297 as seed ortholog is 100%.

Group of orthologs #885. Best score 172 bits
Score difference with first non-orthologous sequence - A.capsulata:68 C.reinhardtii:59

C0NWA1              	100.00%		A8HXK7              	100.00%
Bootstrap support for C0NWA1 as seed ortholog is 97%.
Bootstrap support for A8HXK7 as seed ortholog is 94%.

Group of orthologs #886. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:171 C.reinhardtii:171

C0NLV2              	100.00%		A8HN61              	100.00%
Bootstrap support for C0NLV2 as seed ortholog is 100%.
Bootstrap support for A8HN61 as seed ortholog is 100%.

Group of orthologs #887. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:171 C.reinhardtii:171

C0NG23              	100.00%		A8IWU0              	100.00%
Bootstrap support for C0NG23 as seed ortholog is 100%.
Bootstrap support for A8IWU0 as seed ortholog is 100%.

Group of orthologs #888. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:171 C.reinhardtii:171

C0NAP7              	100.00%		A8J339              	100.00%
Bootstrap support for C0NAP7 as seed ortholog is 100%.
Bootstrap support for A8J339 as seed ortholog is 100%.

Group of orthologs #889. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:171 C.reinhardtii:171

C0NV74              	100.00%		A8I243              	100.00%
Bootstrap support for C0NV74 as seed ortholog is 100%.
Bootstrap support for A8I243 as seed ortholog is 100%.

Group of orthologs #890. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:171 C.reinhardtii:171

C0NFZ2              	100.00%		A8J3B2              	100.00%
Bootstrap support for C0NFZ2 as seed ortholog is 100%.
Bootstrap support for A8J3B2 as seed ortholog is 100%.

Group of orthologs #891. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:171 C.reinhardtii:171

C0NAL6              	100.00%		A8JEE6              	100.00%
Bootstrap support for C0NAL6 as seed ortholog is 100%.
Bootstrap support for A8JEE6 as seed ortholog is 100%.

Group of orthologs #892. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:171 C.reinhardtii:171

C0NL50              	100.00%		A8J505              	100.00%
Bootstrap support for C0NL50 as seed ortholog is 100%.
Bootstrap support for A8J505 as seed ortholog is 100%.

Group of orthologs #893. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:171 C.reinhardtii:171

C0NR92              	100.00%		A8J166              	100.00%
Bootstrap support for C0NR92 as seed ortholog is 100%.
Bootstrap support for A8J166 as seed ortholog is 100%.

Group of orthologs #894. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:171 C.reinhardtii:171

C0NVX1              	100.00%		A8JB06              	100.00%
Bootstrap support for C0NVX1 as seed ortholog is 100%.
Bootstrap support for A8JB06 as seed ortholog is 100%.

Group of orthologs #895. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:171 C.reinhardtii:171

C0NXT6              	100.00%		A8JCZ5              	100.00%
Bootstrap support for C0NXT6 as seed ortholog is 100%.
Bootstrap support for A8JCZ5 as seed ortholog is 100%.

Group of orthologs #896. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:170 C.reinhardtii:79

C0NLU9              	100.00%		A8JF41              	100.00%
                    	       		A8JFD4              	100.00%
                    	       		A8JF43              	77.39%
                    	       		A8JF44              	73.69%
                    	       		A8J8V9              	30.17%
                    	       		A8J8I0              	21.40%
                    	       		A8IN15              	11.02%
                    	       		A8J3Q3              	6.24%
                    	       		A8HTD7              	5.55%
Bootstrap support for C0NLU9 as seed ortholog is 100%.
Bootstrap support for A8JF41 as seed ortholog is 92%.
Bootstrap support for A8JFD4 as seed ortholog is 92%.

Group of orthologs #897. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:170 C.reinhardtii:170

C0NFE0              	100.00%		A8HPN5              	100.00%
Bootstrap support for C0NFE0 as seed ortholog is 100%.
Bootstrap support for A8HPN5 as seed ortholog is 100%.

Group of orthologs #898. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:54 C.reinhardtii:23

C0NPD2              	100.00%		A8IIQ2              	100.00%
Bootstrap support for C0NPD2 as seed ortholog is 87%.
Bootstrap support for A8IIQ2 as seed ortholog is 69%.
Alternative seed ortholog is A8HW48 (23 bits away from this cluster)

Group of orthologs #899. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:170 C.reinhardtii:170

C0NCM9              	100.00%		A8J5Q8              	100.00%
Bootstrap support for C0NCM9 as seed ortholog is 100%.
Bootstrap support for A8J5Q8 as seed ortholog is 100%.

Group of orthologs #900. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:23 C.reinhardtii:170

C0NMT6              	100.00%		A8IUI1              	100.00%
Bootstrap support for C0NMT6 as seed ortholog is 72%.
Alternative seed ortholog is C0NXY9 (23 bits away from this cluster)
Bootstrap support for A8IUI1 as seed ortholog is 100%.

Group of orthologs #901. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:170 C.reinhardtii:121

C0NL35              	100.00%		A8J3D3              	100.00%
Bootstrap support for C0NL35 as seed ortholog is 100%.
Bootstrap support for A8J3D3 as seed ortholog is 99%.

Group of orthologs #902. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:170 C.reinhardtii:170

C0NH79              	100.00%		Q6V506              	100.00%
Bootstrap support for C0NH79 as seed ortholog is 100%.
Bootstrap support for Q6V506 as seed ortholog is 100%.

Group of orthologs #903. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:170 C.reinhardtii:51

C0NI23              	100.00%		O22448              	100.00%
Bootstrap support for C0NI23 as seed ortholog is 100%.
Bootstrap support for O22448 as seed ortholog is 97%.

Group of orthologs #904. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:170 C.reinhardtii:170

C0NWI0              	100.00%		A8JFC3              	100.00%
Bootstrap support for C0NWI0 as seed ortholog is 100%.
Bootstrap support for A8JFC3 as seed ortholog is 100%.

Group of orthologs #905. Best score 169 bits
Score difference with first non-orthologous sequence - A.capsulata:60 C.reinhardtii:169

C0NMR3              	100.00%		A8J3X9              	100.00%
Bootstrap support for C0NMR3 as seed ortholog is 98%.
Bootstrap support for A8J3X9 as seed ortholog is 100%.

Group of orthologs #906. Best score 169 bits
Score difference with first non-orthologous sequence - A.capsulata:98 C.reinhardtii:169

C0NL11              	100.00%		A8JC02              	100.00%
Bootstrap support for C0NL11 as seed ortholog is 98%.
Bootstrap support for A8JC02 as seed ortholog is 100%.

Group of orthologs #907. Best score 169 bits
Score difference with first non-orthologous sequence - A.capsulata:169 C.reinhardtii:169

C0NJK8              	100.00%		A8JGE8              	100.00%
Bootstrap support for C0NJK8 as seed ortholog is 100%.
Bootstrap support for A8JGE8 as seed ortholog is 100%.

Group of orthologs #908. Best score 169 bits
Score difference with first non-orthologous sequence - A.capsulata:169 C.reinhardtii:169

C0NRM5              	100.00%		A8J9P9              	100.00%
Bootstrap support for C0NRM5 as seed ortholog is 100%.
Bootstrap support for A8J9P9 as seed ortholog is 100%.

Group of orthologs #909. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:168 C.reinhardtii:168

C0NCE3              	100.00%		A8HN50              	100.00%
Bootstrap support for C0NCE3 as seed ortholog is 100%.
Bootstrap support for A8HN50 as seed ortholog is 100%.

Group of orthologs #910. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:102 C.reinhardtii:168

C0NEC0              	100.00%		A8I4H7              	100.00%
Bootstrap support for C0NEC0 as seed ortholog is 99%.
Bootstrap support for A8I4H7 as seed ortholog is 100%.

Group of orthologs #911. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:168 C.reinhardtii:39

C0NJU4              	100.00%		A8HX47              	100.00%
Bootstrap support for C0NJU4 as seed ortholog is 100%.
Bootstrap support for A8HX47 as seed ortholog is 90%.

Group of orthologs #912. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:168 C.reinhardtii:168

C0NVQ4              	100.00%		A8I2D8              	100.00%
Bootstrap support for C0NVQ4 as seed ortholog is 100%.
Bootstrap support for A8I2D8 as seed ortholog is 100%.

Group of orthologs #913. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:168 C.reinhardtii:121

C0NTI1              	100.00%		A8IFL6              	100.00%
Bootstrap support for C0NTI1 as seed ortholog is 100%.
Bootstrap support for A8IFL6 as seed ortholog is 99%.

Group of orthologs #914. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:168 C.reinhardtii:168

C0NLZ4              	100.00%		A8J801              	100.00%
Bootstrap support for C0NLZ4 as seed ortholog is 100%.
Bootstrap support for A8J801 as seed ortholog is 100%.

Group of orthologs #915. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:168 C.reinhardtii:168

C0NPZ7              	100.00%		A8JAD3              	100.00%
Bootstrap support for C0NPZ7 as seed ortholog is 100%.
Bootstrap support for A8JAD3 as seed ortholog is 100%.

Group of orthologs #916. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:56 C.reinhardtii:45

C0P0S3              	100.00%		A8JBP5              	100.00%
Bootstrap support for C0P0S3 as seed ortholog is 91%.
Bootstrap support for A8JBP5 as seed ortholog is 88%.

Group of orthologs #917. Best score 167 bits
Score difference with first non-orthologous sequence - A.capsulata:167 C.reinhardtii:48

C0NZ94              	100.00%		A8IW75              	100.00%
                    	       		A8IW84              	99.26%
                    	       		A8HV98              	60.00%
                    	       		A8IJS4              	60.00%
                    	       		A8IR69              	60.00%
                    	       		A8HWX1              	59.26%
                    	       		A8HWE3              	59.26%
                    	       		A8HWX5              	59.26%
                    	       		A8IR79              	59.26%
                    	       		A8JIN6              	59.26%
                    	       		A8JDE1              	58.52%
                    	       		A8HSB2              	57.78%
                    	       		A8JDH1              	57.04%
                    	       		A8JDC9              	57.04%
                    	       		A8JDC0              	56.30%
                    	       		A8IJR6              	55.56%
                    	       		A8JJQ6              	54.07%
                    	       		A8JJS0              	43.70%
                    	       		A8JJV5              	20.74%
                    	       		A8JJN6              	15.56%
                    	       		A8JCT1              	9.63%
Bootstrap support for C0NZ94 as seed ortholog is 100%.
Bootstrap support for A8IW75 as seed ortholog is 99%.

Group of orthologs #918. Best score 167 bits
Score difference with first non-orthologous sequence - A.capsulata:44 C.reinhardtii:10

C0NWZ6              	100.00%		A8IPJ0              	100.00%
Bootstrap support for C0NWZ6 as seed ortholog is 84%.
Bootstrap support for A8IPJ0 as seed ortholog is 73%.
Alternative seed ortholog is A8JI17 (10 bits away from this cluster)

Group of orthologs #919. Best score 167 bits
Score difference with first non-orthologous sequence - A.capsulata:167 C.reinhardtii:167

C0NJU0              	100.00%		A8J7L7              	100.00%
Bootstrap support for C0NJU0 as seed ortholog is 100%.
Bootstrap support for A8J7L7 as seed ortholog is 100%.

Group of orthologs #920. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 C.reinhardtii:27

C0NPL9              	100.00%		A8IHW0              	100.00%
                    	       		A8HPG3              	17.30%
                    	       		A8HNF6              	12.91%
                    	       		A8IIZ1              	12.09%
Bootstrap support for C0NPL9 as seed ortholog is 100%.
Bootstrap support for A8IHW0 as seed ortholog is 98%.

Group of orthologs #921. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 C.reinhardtii:166

C0NF13              	100.00%		A8HUP9              	100.00%
Bootstrap support for C0NF13 as seed ortholog is 100%.
Bootstrap support for A8HUP9 as seed ortholog is 100%.

Group of orthologs #922. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 C.reinhardtii:126

C0NM33              	100.00%		A8IG64              	100.00%
Bootstrap support for C0NM33 as seed ortholog is 100%.
Bootstrap support for A8IG64 as seed ortholog is 100%.

Group of orthologs #923. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 C.reinhardtii:166

C0NYM9              	100.00%		A8HP79              	100.00%
Bootstrap support for C0NYM9 as seed ortholog is 100%.
Bootstrap support for A8HP79 as seed ortholog is 100%.

Group of orthologs #924. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 C.reinhardtii:166

C0NW49              	100.00%		A8IXF4              	100.00%
Bootstrap support for C0NW49 as seed ortholog is 100%.
Bootstrap support for A8IXF4 as seed ortholog is 100%.

Group of orthologs #925. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 C.reinhardtii:166

C0NYQ7              	100.00%		A8JEN9              	100.00%
Bootstrap support for C0NYQ7 as seed ortholog is 100%.
Bootstrap support for A8JEN9 as seed ortholog is 100%.

Group of orthologs #926. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 C.reinhardtii:166

C0P0X7              	100.00%		A8JJH8              	100.00%
Bootstrap support for C0P0X7 as seed ortholog is 100%.
Bootstrap support for A8JJH8 as seed ortholog is 100%.

Group of orthologs #927. Best score 165 bits
Score difference with first non-orthologous sequence - A.capsulata:165 C.reinhardtii:165

C0NQ56              	100.00%		A8HNU4              	100.00%
Bootstrap support for C0NQ56 as seed ortholog is 100%.
Bootstrap support for A8HNU4 as seed ortholog is 100%.

Group of orthologs #928. Best score 165 bits
Score difference with first non-orthologous sequence - A.capsulata:165 C.reinhardtii:165

C0NSX6              	100.00%		A8HMG7              	100.00%
Bootstrap support for C0NSX6 as seed ortholog is 100%.
Bootstrap support for A8HMG7 as seed ortholog is 100%.

Group of orthologs #929. Best score 165 bits
Score difference with first non-orthologous sequence - A.capsulata:63 C.reinhardtii:68

C0NH54              	100.00%		A8JBM6              	100.00%
Bootstrap support for C0NH54 as seed ortholog is 94%.
Bootstrap support for A8JBM6 as seed ortholog is 97%.

Group of orthologs #930. Best score 165 bits
Score difference with first non-orthologous sequence - A.capsulata:1 C.reinhardtii:57

C0NIN9              	100.00%		A8JEQ5              	100.00%
Bootstrap support for C0NIN9 as seed ortholog is 50%.
Alternative seed ortholog is C0NLR3 (1 bits away from this cluster)
Bootstrap support for A8JEQ5 as seed ortholog is 90%.

Group of orthologs #931. Best score 165 bits
Score difference with first non-orthologous sequence - A.capsulata:165 C.reinhardtii:165

C0NRA8              	100.00%		A8J7C2              	100.00%
Bootstrap support for C0NRA8 as seed ortholog is 100%.
Bootstrap support for A8J7C2 as seed ortholog is 100%.

Group of orthologs #932. Best score 165 bits
Score difference with first non-orthologous sequence - A.capsulata:165 C.reinhardtii:165

C0NYN6              	100.00%		A8J1L5              	100.00%
Bootstrap support for C0NYN6 as seed ortholog is 100%.
Bootstrap support for A8J1L5 as seed ortholog is 100%.

Group of orthologs #933. Best score 165 bits
Score difference with first non-orthologous sequence - A.capsulata:165 C.reinhardtii:165

C0NVC6              	100.00%		A8JGK1              	100.00%
Bootstrap support for C0NVC6 as seed ortholog is 100%.
Bootstrap support for A8JGK1 as seed ortholog is 100%.

Group of orthologs #934. Best score 164 bits
Score difference with first non-orthologous sequence - A.capsulata:164 C.reinhardtii:62

C0NH53              	100.00%		A8J664              	100.00%
C0P0X9              	7.22%		
Bootstrap support for C0NH53 as seed ortholog is 100%.
Bootstrap support for A8J664 as seed ortholog is 89%.

Group of orthologs #935. Best score 164 bits
Score difference with first non-orthologous sequence - A.capsulata:164 C.reinhardtii:164

C0NTE4              	100.00%		A8IRW0              	100.00%
                    	       		A8I563              	25.50%
Bootstrap support for C0NTE4 as seed ortholog is 100%.
Bootstrap support for A8IRW0 as seed ortholog is 100%.

Group of orthologs #936. Best score 164 bits
Score difference with first non-orthologous sequence - A.capsulata:164 C.reinhardtii:164

C0NDS9              	100.00%		A8HY98              	100.00%
Bootstrap support for C0NDS9 as seed ortholog is 100%.
Bootstrap support for A8HY98 as seed ortholog is 100%.

Group of orthologs #937. Best score 164 bits
Score difference with first non-orthologous sequence - A.capsulata:164 C.reinhardtii:164

C0NCD4              	100.00%		A8I4E1              	100.00%
Bootstrap support for C0NCD4 as seed ortholog is 100%.
Bootstrap support for A8I4E1 as seed ortholog is 100%.

Group of orthologs #938. Best score 164 bits
Score difference with first non-orthologous sequence - A.capsulata:164 C.reinhardtii:164

C0NMP8              	100.00%		A8IJ00              	100.00%
Bootstrap support for C0NMP8 as seed ortholog is 100%.
Bootstrap support for A8IJ00 as seed ortholog is 100%.

Group of orthologs #939. Best score 164 bits
Score difference with first non-orthologous sequence - A.capsulata:164 C.reinhardtii:164

C0NR72              	100.00%		A8J9D4              	100.00%
Bootstrap support for C0NR72 as seed ortholog is 100%.
Bootstrap support for A8J9D4 as seed ortholog is 100%.

Group of orthologs #940. Best score 164 bits
Score difference with first non-orthologous sequence - A.capsulata:164 C.reinhardtii:164

C0NVK9              	100.00%		A8J7E2              	100.00%
Bootstrap support for C0NVK9 as seed ortholog is 100%.
Bootstrap support for A8J7E2 as seed ortholog is 100%.

Group of orthologs #941. Best score 164 bits
Score difference with first non-orthologous sequence - A.capsulata:103 C.reinhardtii:164

C0NYS5              	100.00%		A8JEV0              	100.00%
Bootstrap support for C0NYS5 as seed ortholog is 100%.
Bootstrap support for A8JEV0 as seed ortholog is 100%.

Group of orthologs #942. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:163 C.reinhardtii:54

C0NBS3              	100.00%		A8I9K7              	100.00%
                    	       		A8J055              	9.05%
Bootstrap support for C0NBS3 as seed ortholog is 100%.
Bootstrap support for A8I9K7 as seed ortholog is 99%.

Group of orthologs #943. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:163 C.reinhardtii:163

C0NTM9              	100.00%		A8IRW9              	100.00%
                    	       		A8IRW7              	8.85%
Bootstrap support for C0NTM9 as seed ortholog is 100%.
Bootstrap support for A8IRW9 as seed ortholog is 100%.

Group of orthologs #944. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:163 C.reinhardtii:163

C0NG68              	100.00%		A8HNS4              	100.00%
Bootstrap support for C0NG68 as seed ortholog is 100%.
Bootstrap support for A8HNS4 as seed ortholog is 100%.

Group of orthologs #945. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:99 C.reinhardtii:20

C0NN45              	100.00%		A8HZE6              	100.00%
Bootstrap support for C0NN45 as seed ortholog is 98%.
Bootstrap support for A8HZE6 as seed ortholog is 63%.
Alternative seed ortholog is A8IZM6 (20 bits away from this cluster)

Group of orthologs #946. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:163 C.reinhardtii:163

C0NKW9              	100.00%		A8I8K9              	100.00%
Bootstrap support for C0NKW9 as seed ortholog is 100%.
Bootstrap support for A8I8K9 as seed ortholog is 100%.

Group of orthologs #947. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:163 C.reinhardtii:121

C0NP10              	100.00%		A8J3U2              	100.00%
Bootstrap support for C0NP10 as seed ortholog is 100%.
Bootstrap support for A8J3U2 as seed ortholog is 99%.

Group of orthologs #948. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:163 C.reinhardtii:163

C0NZI0              	100.00%		A8J3C7              	100.00%
Bootstrap support for C0NZI0 as seed ortholog is 100%.
Bootstrap support for A8J3C7 as seed ortholog is 100%.

Group of orthologs #949. Best score 162 bits
Score difference with first non-orthologous sequence - A.capsulata:26 C.reinhardtii:67

C0NWQ9              	100.00%		A8IX47              	100.00%
C0NQX6              	10.24%		A8IX35              	72.89%
Bootstrap support for C0NWQ9 as seed ortholog is 75%.
Bootstrap support for A8IX47 as seed ortholog is 93%.

Group of orthologs #950. Best score 162 bits
Score difference with first non-orthologous sequence - A.capsulata:162 C.reinhardtii:162

C0NM49              	100.00%		A8I0A3              	100.00%
Bootstrap support for C0NM49 as seed ortholog is 100%.
Bootstrap support for A8I0A3 as seed ortholog is 100%.

Group of orthologs #951. Best score 162 bits
Score difference with first non-orthologous sequence - A.capsulata:162 C.reinhardtii:23

C0NUF5              	100.00%		A8HQM1              	100.00%
Bootstrap support for C0NUF5 as seed ortholog is 100%.
Bootstrap support for A8HQM1 as seed ortholog is 67%.
Alternative seed ortholog is A8HXL0 (23 bits away from this cluster)

Group of orthologs #952. Best score 162 bits
Score difference with first non-orthologous sequence - A.capsulata:162 C.reinhardtii:162

C0NGL0              	100.00%		A8IUH9              	100.00%
Bootstrap support for C0NGL0 as seed ortholog is 100%.
Bootstrap support for A8IUH9 as seed ortholog is 100%.

Group of orthologs #953. Best score 162 bits
Score difference with first non-orthologous sequence - A.capsulata:83 C.reinhardtii:162

C0NE66              	100.00%		A8J344              	100.00%
Bootstrap support for C0NE66 as seed ortholog is 98%.
Bootstrap support for A8J344 as seed ortholog is 100%.

Group of orthologs #954. Best score 162 bits
Score difference with first non-orthologous sequence - A.capsulata:162 C.reinhardtii:109

C0NQU7              	100.00%		A8J9A9              	100.00%
Bootstrap support for C0NQU7 as seed ortholog is 100%.
Bootstrap support for A8J9A9 as seed ortholog is 99%.

Group of orthologs #955. Best score 162 bits
Score difference with first non-orthologous sequence - A.capsulata:162 C.reinhardtii:162

C0NWA5              	100.00%		A8JIP7              	100.00%
Bootstrap support for C0NWA5 as seed ortholog is 100%.
Bootstrap support for A8JIP7 as seed ortholog is 100%.

Group of orthologs #956. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 C.reinhardtii:161

C0NNC2              	100.00%		A8IA37              	100.00%
C0P0D5              	25.46%		
Bootstrap support for C0NNC2 as seed ortholog is 100%.
Bootstrap support for A8IA37 as seed ortholog is 100%.

Group of orthologs #957. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 C.reinhardtii:161

C0NIA1              	100.00%		A8HTX3              	100.00%
Bootstrap support for C0NIA1 as seed ortholog is 100%.
Bootstrap support for A8HTX3 as seed ortholog is 100%.

Group of orthologs #958. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:55 C.reinhardtii:161

C0NNT2              	100.00%		A8I0Q7              	100.00%
Bootstrap support for C0NNT2 as seed ortholog is 94%.
Bootstrap support for A8I0Q7 as seed ortholog is 100%.

Group of orthologs #959. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 C.reinhardtii:112

C0NIU2              	100.00%		A8ILJ9              	100.00%
Bootstrap support for C0NIU2 as seed ortholog is 100%.
Bootstrap support for A8ILJ9 as seed ortholog is 99%.

Group of orthologs #960. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 C.reinhardtii:63

C0NM03              	100.00%		A8IE44              	100.00%
Bootstrap support for C0NM03 as seed ortholog is 100%.
Bootstrap support for A8IE44 as seed ortholog is 97%.

Group of orthologs #961. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 C.reinhardtii:161

C0P0L1              	100.00%		A8IC04              	100.00%
Bootstrap support for C0P0L1 as seed ortholog is 100%.
Bootstrap support for A8IC04 as seed ortholog is 100%.

Group of orthologs #962. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 C.reinhardtii:161

C0NW69              	100.00%		A8JBV1              	100.00%
Bootstrap support for C0NW69 as seed ortholog is 100%.
Bootstrap support for A8JBV1 as seed ortholog is 100%.

Group of orthologs #963. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 C.reinhardtii:161

C0NXD3              	100.00%		A8JBN5              	100.00%
Bootstrap support for C0NXD3 as seed ortholog is 100%.
Bootstrap support for A8JBN5 as seed ortholog is 100%.

Group of orthologs #964. Best score 160 bits
Score difference with first non-orthologous sequence - A.capsulata:160 C.reinhardtii:160

C0NQX7              	100.00%		A8J0T9              	100.00%
                    	       		A8ISJ2              	27.27%
Bootstrap support for C0NQX7 as seed ortholog is 100%.
Bootstrap support for A8J0T9 as seed ortholog is 100%.

Group of orthologs #965. Best score 160 bits
Score difference with first non-orthologous sequence - A.capsulata:160 C.reinhardtii:160

C0NP91              	100.00%		A8IB34              	100.00%
Bootstrap support for C0NP91 as seed ortholog is 100%.
Bootstrap support for A8IB34 as seed ortholog is 100%.

Group of orthologs #966. Best score 160 bits
Score difference with first non-orthologous sequence - A.capsulata:87 C.reinhardtii:82

C0NTH3              	100.00%		A8J3B0              	100.00%
Bootstrap support for C0NTH3 as seed ortholog is 98%.
Bootstrap support for A8J3B0 as seed ortholog is 98%.

Group of orthologs #967. Best score 160 bits
Score difference with first non-orthologous sequence - A.capsulata:160 C.reinhardtii:160

C0NTC1              	100.00%		A8JE85              	100.00%
Bootstrap support for C0NTC1 as seed ortholog is 100%.
Bootstrap support for A8JE85 as seed ortholog is 100%.

Group of orthologs #968. Best score 159 bits
Score difference with first non-orthologous sequence - A.capsulata:159 C.reinhardtii:19

C0NBI3              	100.00%		A8I1K5              	100.00%
                    	       		A8HXY3              	18.70%
Bootstrap support for C0NBI3 as seed ortholog is 100%.
Bootstrap support for A8I1K5 as seed ortholog is 79%.

Group of orthologs #969. Best score 159 bits
Score difference with first non-orthologous sequence - A.capsulata:24 C.reinhardtii:159

C0NU86              	100.00%		A8HQN4              	100.00%
Bootstrap support for C0NU86 as seed ortholog is 70%.
Alternative seed ortholog is C0NIY0 (24 bits away from this cluster)
Bootstrap support for A8HQN4 as seed ortholog is 100%.

Group of orthologs #970. Best score 159 bits
Score difference with first non-orthologous sequence - A.capsulata:159 C.reinhardtii:159

C0NL28              	100.00%		A8J805              	100.00%
Bootstrap support for C0NL28 as seed ortholog is 100%.
Bootstrap support for A8J805 as seed ortholog is 100%.

Group of orthologs #971. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:158 C.reinhardtii:158

C0NKA1              	100.00%		A8HYU2              	100.00%
Bootstrap support for C0NKA1 as seed ortholog is 100%.
Bootstrap support for A8HYU2 as seed ortholog is 100%.

Group of orthologs #972. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:158 C.reinhardtii:158

C0NH91              	100.00%		A8JIN8              	100.00%
Bootstrap support for C0NH91 as seed ortholog is 100%.
Bootstrap support for A8JIN8 as seed ortholog is 100%.

Group of orthologs #973. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:158 C.reinhardtii:158

C0NLF4              	100.00%		A8JG06              	100.00%
Bootstrap support for C0NLF4 as seed ortholog is 100%.
Bootstrap support for A8JG06 as seed ortholog is 100%.

Group of orthologs #974. Best score 157 bits
Score difference with first non-orthologous sequence - A.capsulata:157 C.reinhardtii:157

C0NBR5              	100.00%		A8HQE3              	100.00%
Bootstrap support for C0NBR5 as seed ortholog is 100%.
Bootstrap support for A8HQE3 as seed ortholog is 100%.

Group of orthologs #975. Best score 157 bits
Score difference with first non-orthologous sequence - A.capsulata:157 C.reinhardtii:157

C0NE75              	100.00%		A8J239              	100.00%
Bootstrap support for C0NE75 as seed ortholog is 100%.
Bootstrap support for A8J239 as seed ortholog is 100%.

Group of orthologs #976. Best score 157 bits
Score difference with first non-orthologous sequence - A.capsulata:71 C.reinhardtii:157

C0NBV0              	100.00%		A8J5M2              	100.00%
Bootstrap support for C0NBV0 as seed ortholog is 94%.
Bootstrap support for A8J5M2 as seed ortholog is 100%.

Group of orthologs #977. Best score 157 bits
Score difference with first non-orthologous sequence - A.capsulata:157 C.reinhardtii:93

C0NBZ4              	100.00%		A8J5W6              	100.00%
Bootstrap support for C0NBZ4 as seed ortholog is 100%.
Bootstrap support for A8J5W6 as seed ortholog is 99%.

Group of orthologs #978. Best score 157 bits
Score difference with first non-orthologous sequence - A.capsulata:157 C.reinhardtii:4

C0NMP7              	100.00%		A8JFY9              	100.00%
Bootstrap support for C0NMP7 as seed ortholog is 100%.
Bootstrap support for A8JFY9 as seed ortholog is 52%.
Alternative seed ortholog is A8JFJ2 (4 bits away from this cluster)

Group of orthologs #979. Best score 156 bits
Score difference with first non-orthologous sequence - A.capsulata:156 C.reinhardtii:156

C0NCX8              	100.00%		A8I1Y7              	100.00%
Bootstrap support for C0NCX8 as seed ortholog is 100%.
Bootstrap support for A8I1Y7 as seed ortholog is 100%.

Group of orthologs #980. Best score 156 bits
Score difference with first non-orthologous sequence - A.capsulata:156 C.reinhardtii:156

C0NKC3              	100.00%		A8HP90              	100.00%
Bootstrap support for C0NKC3 as seed ortholog is 100%.
Bootstrap support for A8HP90 as seed ortholog is 100%.

Group of orthologs #981. Best score 156 bits
Score difference with first non-orthologous sequence - A.capsulata:156 C.reinhardtii:156

C0NP78              	100.00%		A8HQD2              	100.00%
Bootstrap support for C0NP78 as seed ortholog is 100%.
Bootstrap support for A8HQD2 as seed ortholog is 100%.

Group of orthologs #982. Best score 156 bits
Score difference with first non-orthologous sequence - A.capsulata:156 C.reinhardtii:109

C0NHJ3              	100.00%		A8IYP2              	100.00%
Bootstrap support for C0NHJ3 as seed ortholog is 100%.
Bootstrap support for A8IYP2 as seed ortholog is 99%.

Group of orthologs #983. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 C.reinhardtii:155

C0NS80              	100.00%		A8I032              	100.00%
Bootstrap support for C0NS80 as seed ortholog is 100%.
Bootstrap support for A8I032 as seed ortholog is 100%.

Group of orthologs #984. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:6 C.reinhardtii:39

C0NUA0              	100.00%		A8HYY7              	100.00%
Bootstrap support for C0NUA0 as seed ortholog is 57%.
Alternative seed ortholog is C0NJ29 (6 bits away from this cluster)
Bootstrap support for A8HYY7 as seed ortholog is 85%.

Group of orthologs #985. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 C.reinhardtii:155

C0NM87              	100.00%		A8IM74              	100.00%
Bootstrap support for C0NM87 as seed ortholog is 100%.
Bootstrap support for A8IM74 as seed ortholog is 100%.

Group of orthologs #986. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:18 C.reinhardtii:25

C0NTC5              	100.00%		A8I6B9              	100.00%
Bootstrap support for C0NTC5 as seed ortholog is 71%.
Alternative seed ortholog is C0P191 (18 bits away from this cluster)
Bootstrap support for A8I6B9 as seed ortholog is 73%.
Alternative seed ortholog is A8IWD2 (25 bits away from this cluster)

Group of orthologs #987. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 C.reinhardtii:41

C0NJM6              	100.00%		A8IXQ0              	100.00%
Bootstrap support for C0NJM6 as seed ortholog is 100%.
Bootstrap support for A8IXQ0 as seed ortholog is 79%.

Group of orthologs #988. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 C.reinhardtii:155

C0P0D6              	100.00%		A8IDI5              	100.00%
Bootstrap support for C0P0D6 as seed ortholog is 100%.
Bootstrap support for A8IDI5 as seed ortholog is 100%.

Group of orthologs #989. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 C.reinhardtii:155

C0NZQ5              	100.00%		A8JAA8              	100.00%
Bootstrap support for C0NZQ5 as seed ortholog is 100%.
Bootstrap support for A8JAA8 as seed ortholog is 100%.

Group of orthologs #990. Best score 154 bits
Score difference with first non-orthologous sequence - A.capsulata:88 C.reinhardtii:50

C0NJJ8              	100.00%		A8HZM9              	100.00%
                    	       		A8J0L0              	25.39%
Bootstrap support for C0NJJ8 as seed ortholog is 99%.
Bootstrap support for A8HZM9 as seed ortholog is 92%.

Group of orthologs #991. Best score 154 bits
Score difference with first non-orthologous sequence - A.capsulata:154 C.reinhardtii:24

C0NID5              	100.00%		A8HPX6              	100.00%
Bootstrap support for C0NID5 as seed ortholog is 100%.
Bootstrap support for A8HPX6 as seed ortholog is 79%.

Group of orthologs #992. Best score 154 bits
Score difference with first non-orthologous sequence - A.capsulata:154 C.reinhardtii:154

C0NR70              	100.00%		A8I4N9              	100.00%
Bootstrap support for C0NR70 as seed ortholog is 100%.
Bootstrap support for A8I4N9 as seed ortholog is 100%.

Group of orthologs #993. Best score 154 bits
Score difference with first non-orthologous sequence - A.capsulata:154 C.reinhardtii:154

C0NXA4              	100.00%		A8IRC0              	100.00%
Bootstrap support for C0NXA4 as seed ortholog is 100%.
Bootstrap support for A8IRC0 as seed ortholog is 100%.

Group of orthologs #994. Best score 153 bits
Score difference with first non-orthologous sequence - A.capsulata:8 C.reinhardtii:67

C0NFK4              	100.00%		A8J1X0              	100.00%
                    	       		A8ISP5              	10.93%
                    	       		A8JHJ5              	7.29%
Bootstrap support for C0NFK4 as seed ortholog is 60%.
Alternative seed ortholog is C0NCW1 (8 bits away from this cluster)
Bootstrap support for A8J1X0 as seed ortholog is 97%.

Group of orthologs #995. Best score 153 bits
Score difference with first non-orthologous sequence - A.capsulata:153 C.reinhardtii:153

C0NIM4              	100.00%		A8JGD1              	100.00%
                    	       		Q7XXT3              	34.89%
Bootstrap support for C0NIM4 as seed ortholog is 100%.
Bootstrap support for A8JGD1 as seed ortholog is 100%.

Group of orthologs #996. Best score 153 bits
Score difference with first non-orthologous sequence - A.capsulata:153 C.reinhardtii:153

C0NE81              	100.00%		A8I0V1              	100.00%
Bootstrap support for C0NE81 as seed ortholog is 100%.
Bootstrap support for A8I0V1 as seed ortholog is 100%.

Group of orthologs #997. Best score 153 bits
Score difference with first non-orthologous sequence - A.capsulata:153 C.reinhardtii:15

C0NW74              	100.00%		A8HVK4              	100.00%
Bootstrap support for C0NW74 as seed ortholog is 100%.
Bootstrap support for A8HVK4 as seed ortholog is 20%.
Alternative seed ortholog is A8JCX9 (15 bits away from this cluster)

Group of orthologs #998. Best score 153 bits
Score difference with first non-orthologous sequence - A.capsulata:153 C.reinhardtii:153

C0NYF4              	100.00%		A8IQD4              	100.00%
Bootstrap support for C0NYF4 as seed ortholog is 100%.
Bootstrap support for A8IQD4 as seed ortholog is 100%.

Group of orthologs #999. Best score 153 bits
Score difference with first non-orthologous sequence - A.capsulata:153 C.reinhardtii:153

C0NYP9              	100.00%		A8IUV7              	100.00%
Bootstrap support for C0NYP9 as seed ortholog is 100%.
Bootstrap support for A8IUV7 as seed ortholog is 100%.

Group of orthologs #1000. Best score 153 bits
Score difference with first non-orthologous sequence - A.capsulata:153 C.reinhardtii:153

C0NHN5              	100.00%		A8JDV2              	100.00%
Bootstrap support for C0NHN5 as seed ortholog is 100%.
Bootstrap support for A8JDV2 as seed ortholog is 100%.

Group of orthologs #1001. Best score 153 bits
Score difference with first non-orthologous sequence - A.capsulata:153 C.reinhardtii:43

C0NYX7              	100.00%		A8J901              	100.00%
Bootstrap support for C0NYX7 as seed ortholog is 100%.
Bootstrap support for A8J901 as seed ortholog is 89%.

Group of orthologs #1002. Best score 152 bits
Score difference with first non-orthologous sequence - A.capsulata:23 C.reinhardtii:68

C0NHT9              	100.00%		Q6UPR1              	100.00%
                    	       		A8IHF8              	7.04%
Bootstrap support for C0NHT9 as seed ortholog is 90%.
Bootstrap support for Q6UPR1 as seed ortholog is 92%.

Group of orthologs #1003. Best score 152 bits
Score difference with first non-orthologous sequence - A.capsulata:152 C.reinhardtii:152

C0NQI6              	100.00%		A8I4F6              	100.00%
Bootstrap support for C0NQI6 as seed ortholog is 100%.
Bootstrap support for A8I4F6 as seed ortholog is 100%.

Group of orthologs #1004. Best score 152 bits
Score difference with first non-orthologous sequence - A.capsulata:152 C.reinhardtii:152

C0NJ23              	100.00%		A8JGN6              	100.00%
Bootstrap support for C0NJ23 as seed ortholog is 100%.
Bootstrap support for A8JGN6 as seed ortholog is 100%.

Group of orthologs #1005. Best score 152 bits
Score difference with first non-orthologous sequence - A.capsulata:35 C.reinhardtii:88

C0NYR5              	100.00%		A8JGV4              	100.00%
Bootstrap support for C0NYR5 as seed ortholog is 88%.
Bootstrap support for A8JGV4 as seed ortholog is 99%.

Group of orthologs #1006. Best score 151 bits
Score difference with first non-orthologous sequence - A.capsulata:151 C.reinhardtii:151

C0NHH9              	100.00%		A8ISB8              	100.00%
Bootstrap support for C0NHH9 as seed ortholog is 100%.
Bootstrap support for A8ISB8 as seed ortholog is 100%.

Group of orthologs #1007. Best score 151 bits
Score difference with first non-orthologous sequence - A.capsulata:151 C.reinhardtii:151

C0NPL2              	100.00%		A8IRD7              	100.00%
Bootstrap support for C0NPL2 as seed ortholog is 100%.
Bootstrap support for A8IRD7 as seed ortholog is 100%.

Group of orthologs #1008. Best score 151 bits
Score difference with first non-orthologous sequence - A.capsulata:151 C.reinhardtii:151

C0NQE3              	100.00%		A8J5A8              	100.00%
Bootstrap support for C0NQE3 as seed ortholog is 100%.
Bootstrap support for A8J5A8 as seed ortholog is 100%.

Group of orthologs #1009. Best score 151 bits
Score difference with first non-orthologous sequence - A.capsulata:151 C.reinhardtii:151

C0NZX5              	100.00%		A8ITR2              	100.00%
Bootstrap support for C0NZX5 as seed ortholog is 100%.
Bootstrap support for A8ITR2 as seed ortholog is 100%.

Group of orthologs #1010. Best score 151 bits
Score difference with first non-orthologous sequence - A.capsulata:151 C.reinhardtii:93

C0NMK8              	100.00%		A8JDH3              	100.00%
Bootstrap support for C0NMK8 as seed ortholog is 100%.
Bootstrap support for A8JDH3 as seed ortholog is 99%.

Group of orthologs #1011. Best score 150 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.reinhardtii:150

C0NLG1              	100.00%		A8HNJ4              	100.00%
                    	       		A8JDZ5              	15.43%
                    	       		A8IUU0              	9.47%
                    	       		A8JBI1              	9.26%
                    	       		A8IS88              	7.61%
Bootstrap support for C0NLG1 as seed ortholog is 93%.
Bootstrap support for A8HNJ4 as seed ortholog is 100%.

Group of orthologs #1012. Best score 150 bits
Score difference with first non-orthologous sequence - A.capsulata:150 C.reinhardtii:150

C0NP77              	100.00%		A8IS13              	100.00%
                    	       		A8HSX7              	61.98%
Bootstrap support for C0NP77 as seed ortholog is 100%.
Bootstrap support for A8IS13 as seed ortholog is 100%.

Group of orthologs #1013. Best score 150 bits
Score difference with first non-orthologous sequence - A.capsulata:150 C.reinhardtii:150

C0NFL2              	100.00%		A8J862              	100.00%
C0NRJ3              	35.66%		
Bootstrap support for C0NFL2 as seed ortholog is 100%.
Bootstrap support for A8J862 as seed ortholog is 100%.

Group of orthologs #1014. Best score 150 bits
Score difference with first non-orthologous sequence - A.capsulata:150 C.reinhardtii:150

C0NE16              	100.00%		A8IJ79              	100.00%
Bootstrap support for C0NE16 as seed ortholog is 100%.
Bootstrap support for A8IJ79 as seed ortholog is 100%.

Group of orthologs #1015. Best score 150 bits
Score difference with first non-orthologous sequence - A.capsulata:150 C.reinhardtii:150

C0NE02              	100.00%		A8JBL3              	100.00%
Bootstrap support for C0NE02 as seed ortholog is 100%.
Bootstrap support for A8JBL3 as seed ortholog is 100%.

Group of orthologs #1016. Best score 150 bits
Score difference with first non-orthologous sequence - A.capsulata:58 C.reinhardtii:30

C0NWP3              	100.00%		A8IZB7              	100.00%
Bootstrap support for C0NWP3 as seed ortholog is 95%.
Bootstrap support for A8IZB7 as seed ortholog is 81%.

Group of orthologs #1017. Best score 150 bits
Score difference with first non-orthologous sequence - A.capsulata:150 C.reinhardtii:150

C0NQ40              	100.00%		A8JBQ5              	100.00%
Bootstrap support for C0NQ40 as seed ortholog is 100%.
Bootstrap support for A8JBQ5 as seed ortholog is 100%.

Group of orthologs #1018. Best score 149 bits
Score difference with first non-orthologous sequence - A.capsulata:149 C.reinhardtii:149

C0NIY5              	100.00%		A8J4K2              	100.00%
                    	       		A8HVF8              	12.17%
Bootstrap support for C0NIY5 as seed ortholog is 100%.
Bootstrap support for A8J4K2 as seed ortholog is 100%.

Group of orthologs #1019. Best score 149 bits
Score difference with first non-orthologous sequence - A.capsulata:149 C.reinhardtii:149

C0NU08              	100.00%		A8IJK3              	100.00%
Bootstrap support for C0NU08 as seed ortholog is 100%.
Bootstrap support for A8IJK3 as seed ortholog is 100%.

Group of orthologs #1020. Best score 149 bits
Score difference with first non-orthologous sequence - A.capsulata:149 C.reinhardtii:149

C0NLR4              	100.00%		A8J951              	100.00%
Bootstrap support for C0NLR4 as seed ortholog is 100%.
Bootstrap support for A8J951 as seed ortholog is 100%.

Group of orthologs #1021. Best score 149 bits
Score difference with first non-orthologous sequence - A.capsulata:149 C.reinhardtii:149

C0NWR5              	100.00%		A8JFM6              	100.00%
Bootstrap support for C0NWR5 as seed ortholog is 100%.
Bootstrap support for A8JFM6 as seed ortholog is 100%.

Group of orthologs #1022. Best score 149 bits
Score difference with first non-orthologous sequence - A.capsulata:149 C.reinhardtii:149

C0NW39              	100.00%		Q84TR5              	100.00%
Bootstrap support for C0NW39 as seed ortholog is 100%.
Bootstrap support for Q84TR5 as seed ortholog is 100%.

Group of orthologs #1023. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 C.reinhardtii:83

C0NE64              	100.00%		A8ILL7              	100.00%
                    	       		A8I318              	26.48%
                    	       		A8ILM1              	22.65%
Bootstrap support for C0NE64 as seed ortholog is 100%.
Bootstrap support for A8ILL7 as seed ortholog is 98%.

Group of orthologs #1024. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 C.reinhardtii:9

C0NBM2              	100.00%		A8IAG8              	100.00%
Bootstrap support for C0NBM2 as seed ortholog is 100%.
Bootstrap support for A8IAG8 as seed ortholog is 94%.

Group of orthologs #1025. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 C.reinhardtii:37

C0NIZ0              	100.00%		A8I797              	100.00%
Bootstrap support for C0NIZ0 as seed ortholog is 100%.
Bootstrap support for A8I797 as seed ortholog is 84%.

Group of orthologs #1026. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 C.reinhardtii:68

C0NRN4              	100.00%		A8HRZ9              	100.00%
Bootstrap support for C0NRN4 as seed ortholog is 100%.
Bootstrap support for A8HRZ9 as seed ortholog is 99%.

Group of orthologs #1027. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 C.reinhardtii:148

C0NRI1              	100.00%		A8HXH0              	100.00%
Bootstrap support for C0NRI1 as seed ortholog is 100%.
Bootstrap support for A8HXH0 as seed ortholog is 100%.

Group of orthologs #1028. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 C.reinhardtii:148

C0NW31              	100.00%		A8HUC3              	100.00%
Bootstrap support for C0NW31 as seed ortholog is 100%.
Bootstrap support for A8HUC3 as seed ortholog is 100%.

Group of orthologs #1029. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 C.reinhardtii:148

C0NH92              	100.00%		A8J4Q3              	100.00%
Bootstrap support for C0NH92 as seed ortholog is 100%.
Bootstrap support for A8J4Q3 as seed ortholog is 100%.

Group of orthologs #1030. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 C.reinhardtii:148

C0NSI6              	100.00%		A8IZN2              	100.00%
Bootstrap support for C0NSI6 as seed ortholog is 100%.
Bootstrap support for A8IZN2 as seed ortholog is 100%.

Group of orthologs #1031. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 C.reinhardtii:148

C0NFQ1              	100.00%		A8JIN2              	100.00%
Bootstrap support for C0NFQ1 as seed ortholog is 100%.
Bootstrap support for A8JIN2 as seed ortholog is 100%.

Group of orthologs #1032. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 C.reinhardtii:148

C0P150              	100.00%		A8J212              	100.00%
Bootstrap support for C0P150 as seed ortholog is 100%.
Bootstrap support for A8J212 as seed ortholog is 100%.

Group of orthologs #1033. Best score 147 bits
Score difference with first non-orthologous sequence - A.capsulata:147 C.reinhardtii:98

C0NT51              	100.00%		A8HMR3              	100.00%
                    	       		A8IR06              	100.00%
Bootstrap support for C0NT51 as seed ortholog is 100%.
Bootstrap support for A8HMR3 as seed ortholog is 100%.
Bootstrap support for A8IR06 as seed ortholog is 99%.

Group of orthologs #1034. Best score 147 bits
Score difference with first non-orthologous sequence - A.capsulata:147 C.reinhardtii:147

C0NI19              	100.00%		A8HPE7              	100.00%
Bootstrap support for C0NI19 as seed ortholog is 100%.
Bootstrap support for A8HPE7 as seed ortholog is 100%.

Group of orthologs #1035. Best score 147 bits
Score difference with first non-orthologous sequence - A.capsulata:147 C.reinhardtii:147

C0NM32              	100.00%		A8IF73              	100.00%
Bootstrap support for C0NM32 as seed ortholog is 100%.
Bootstrap support for A8IF73 as seed ortholog is 100%.

Group of orthologs #1036. Best score 146 bits
Score difference with first non-orthologous sequence - A.capsulata:146 C.reinhardtii:146

C0NJM4              	100.00%		A8IBT5              	100.00%
Bootstrap support for C0NJM4 as seed ortholog is 100%.
Bootstrap support for A8IBT5 as seed ortholog is 100%.

Group of orthologs #1037. Best score 146 bits
Score difference with first non-orthologous sequence - A.capsulata:146 C.reinhardtii:146

C0NBC4              	100.00%		A8JFA0              	100.00%
Bootstrap support for C0NBC4 as seed ortholog is 100%.
Bootstrap support for A8JFA0 as seed ortholog is 100%.

Group of orthologs #1038. Best score 146 bits
Score difference with first non-orthologous sequence - A.capsulata:146 C.reinhardtii:146

C0P1B9              	100.00%		A8J1W0              	100.00%
Bootstrap support for C0P1B9 as seed ortholog is 100%.
Bootstrap support for A8J1W0 as seed ortholog is 100%.

Group of orthologs #1039. Best score 146 bits
Score difference with first non-orthologous sequence - A.capsulata:146 C.reinhardtii:146

C0NMG1              	100.00%		Q944M9              	100.00%
Bootstrap support for C0NMG1 as seed ortholog is 100%.
Bootstrap support for Q944M9 as seed ortholog is 100%.

Group of orthologs #1040. Best score 146 bits
Score difference with first non-orthologous sequence - A.capsulata:146 C.reinhardtii:146

C0P047              	100.00%		A8JFB7              	100.00%
Bootstrap support for C0P047 as seed ortholog is 100%.
Bootstrap support for A8JFB7 as seed ortholog is 100%.

Group of orthologs #1041. Best score 145 bits
Score difference with first non-orthologous sequence - A.capsulata:145 C.reinhardtii:145

C0NB33              	100.00%		A8I0I1              	100.00%
Bootstrap support for C0NB33 as seed ortholog is 100%.
Bootstrap support for A8I0I1 as seed ortholog is 100%.

Group of orthologs #1042. Best score 145 bits
Score difference with first non-orthologous sequence - A.capsulata:145 C.reinhardtii:145

C0NAI7              	100.00%		A8IY93              	100.00%
Bootstrap support for C0NAI7 as seed ortholog is 100%.
Bootstrap support for A8IY93 as seed ortholog is 100%.

Group of orthologs #1043. Best score 145 bits
Score difference with first non-orthologous sequence - A.capsulata:145 C.reinhardtii:145

C0NGE1              	100.00%		A8JAH8              	100.00%
Bootstrap support for C0NGE1 as seed ortholog is 100%.
Bootstrap support for A8JAH8 as seed ortholog is 100%.

Group of orthologs #1044. Best score 145 bits
Score difference with first non-orthologous sequence - A.capsulata:145 C.reinhardtii:145

C0NXQ4              	100.00%		A8IUN8              	100.00%
Bootstrap support for C0NXQ4 as seed ortholog is 100%.
Bootstrap support for A8IUN8 as seed ortholog is 100%.

Group of orthologs #1045. Best score 145 bits
Score difference with first non-orthologous sequence - A.capsulata:145 C.reinhardtii:145

C0NUH8              	100.00%		A8J7H3              	100.00%
Bootstrap support for C0NUH8 as seed ortholog is 100%.
Bootstrap support for A8J7H3 as seed ortholog is 100%.

Group of orthologs #1046. Best score 145 bits
Score difference with first non-orthologous sequence - A.capsulata:145 C.reinhardtii:58

C0NWW6              	100.00%		A8J7D5              	100.00%
Bootstrap support for C0NWW6 as seed ortholog is 100%.
Bootstrap support for A8J7D5 as seed ortholog is 93%.

Group of orthologs #1047. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:64 C.reinhardtii:144

C0NN24              	100.00%		A8J216              	100.00%
Bootstrap support for C0NN24 as seed ortholog is 99%.
Bootstrap support for A8J216 as seed ortholog is 100%.

Group of orthologs #1048. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 C.reinhardtii:144

C0NKT8              	100.00%		A8J7S5              	100.00%
Bootstrap support for C0NKT8 as seed ortholog is 100%.
Bootstrap support for A8J7S5 as seed ortholog is 100%.

Group of orthologs #1049. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 C.reinhardtii:144

C0NWM3              	100.00%		A8J2G4              	100.00%
Bootstrap support for C0NWM3 as seed ortholog is 100%.
Bootstrap support for A8J2G4 as seed ortholog is 100%.

Group of orthologs #1050. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 C.reinhardtii:31

C0NN15              	100.00%		A8JFP4              	100.00%
Bootstrap support for C0NN15 as seed ortholog is 100%.
Bootstrap support for A8JFP4 as seed ortholog is 74%.
Alternative seed ortholog is A8IJP0 (31 bits away from this cluster)

Group of orthologs #1051. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 C.reinhardtii:144

C0NJL7              	100.00%		Q8VZX3              	100.00%
Bootstrap support for C0NJL7 as seed ortholog is 100%.
Bootstrap support for Q8VZX3 as seed ortholog is 100%.

Group of orthologs #1052. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 C.reinhardtii:143

C0NES6              	100.00%		A8J7C5              	100.00%
                    	       		A8J7C6              	49.53%
                    	       		A8J7C7              	29.41%
Bootstrap support for C0NES6 as seed ortholog is 100%.
Bootstrap support for A8J7C5 as seed ortholog is 100%.

Group of orthologs #1053. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:40 C.reinhardtii:25

C0NDN1              	100.00%		A8HN23              	100.00%
Bootstrap support for C0NDN1 as seed ortholog is 93%.
Bootstrap support for A8HN23 as seed ortholog is 84%.

Group of orthologs #1054. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 C.reinhardtii:143

C0NW00              	100.00%		A8HXK0              	100.00%
Bootstrap support for C0NW00 as seed ortholog is 100%.
Bootstrap support for A8HXK0 as seed ortholog is 100%.

Group of orthologs #1055. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 C.reinhardtii:143

C0NUW6              	100.00%		A8IC58              	100.00%
Bootstrap support for C0NUW6 as seed ortholog is 100%.
Bootstrap support for A8IC58 as seed ortholog is 100%.

Group of orthologs #1056. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 C.reinhardtii:143

C0NKX8              	100.00%		A8JGX8              	100.00%
Bootstrap support for C0NKX8 as seed ortholog is 100%.
Bootstrap support for A8JGX8 as seed ortholog is 100%.

Group of orthologs #1057. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 C.reinhardtii:143

C0NMN5              	100.00%		A8JH29              	100.00%
Bootstrap support for C0NMN5 as seed ortholog is 100%.
Bootstrap support for A8JH29 as seed ortholog is 100%.

Group of orthologs #1058. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 C.reinhardtii:143

C0NTR7              	100.00%		A8JHR1              	100.00%
Bootstrap support for C0NTR7 as seed ortholog is 100%.
Bootstrap support for A8JHR1 as seed ortholog is 100%.

Group of orthologs #1059. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 C.reinhardtii:143

C0P0H0              	100.00%		A8JGJ2              	100.00%
Bootstrap support for C0P0H0 as seed ortholog is 100%.
Bootstrap support for A8JGJ2 as seed ortholog is 100%.

Group of orthologs #1060. Best score 142 bits
Score difference with first non-orthologous sequence - A.capsulata:142 C.reinhardtii:142

C0NV31              	100.00%		A8IQC1              	100.00%
Bootstrap support for C0NV31 as seed ortholog is 100%.
Bootstrap support for A8IQC1 as seed ortholog is 100%.

Group of orthologs #1061. Best score 142 bits
Score difference with first non-orthologous sequence - A.capsulata:142 C.reinhardtii:98

C0NZD2              	100.00%		A8J8M9              	100.00%
Bootstrap support for C0NZD2 as seed ortholog is 100%.
Bootstrap support for A8J8M9 as seed ortholog is 100%.

Group of orthologs #1062. Best score 142 bits
Score difference with first non-orthologous sequence - A.capsulata:142 C.reinhardtii:91

C0P147              	100.00%		A8JG85              	100.00%
Bootstrap support for C0P147 as seed ortholog is 100%.
Bootstrap support for A8JG85 as seed ortholog is 99%.

Group of orthologs #1063. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:18 C.reinhardtii:65

C0NFJ2              	100.00%		A8I1T0              	100.00%
C0NMU9              	6.11%		
Bootstrap support for C0NFJ2 as seed ortholog is 65%.
Alternative seed ortholog is C0NZ57 (18 bits away from this cluster)
Bootstrap support for A8I1T0 as seed ortholog is 94%.

Group of orthologs #1064. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:141 C.reinhardtii:141

C0NDH9              	100.00%		A8HMV2              	100.00%
Bootstrap support for C0NDH9 as seed ortholog is 100%.
Bootstrap support for A8HMV2 as seed ortholog is 100%.

Group of orthologs #1065. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:141 C.reinhardtii:141

C0NE98              	100.00%		A8IPS8              	100.00%
Bootstrap support for C0NE98 as seed ortholog is 100%.
Bootstrap support for A8IPS8 as seed ortholog is 100%.

Group of orthologs #1066. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:61 C.reinhardtii:59

C0NDM4              	100.00%		A8JFE5              	100.00%
Bootstrap support for C0NDM4 as seed ortholog is 97%.
Bootstrap support for A8JFE5 as seed ortholog is 96%.

Group of orthologs #1067. Best score 140 bits
Score difference with first non-orthologous sequence - A.capsulata:140 C.reinhardtii:74

C0NGZ6              	100.00%		A8ILY4              	100.00%
Bootstrap support for C0NGZ6 as seed ortholog is 100%.
Bootstrap support for A8ILY4 as seed ortholog is 95%.

Group of orthologs #1068. Best score 140 bits
Score difference with first non-orthologous sequence - A.capsulata:140 C.reinhardtii:140

C0NG73              	100.00%		A8ISK2              	100.00%
Bootstrap support for C0NG73 as seed ortholog is 100%.
Bootstrap support for A8ISK2 as seed ortholog is 100%.

Group of orthologs #1069. Best score 140 bits
Score difference with first non-orthologous sequence - A.capsulata:140 C.reinhardtii:140

C0NWA6              	100.00%		A8HY08              	100.00%
Bootstrap support for C0NWA6 as seed ortholog is 100%.
Bootstrap support for A8HY08 as seed ortholog is 100%.

Group of orthologs #1070. Best score 140 bits
Score difference with first non-orthologous sequence - A.capsulata:140 C.reinhardtii:140

C0P045              	100.00%		Q8LL16              	100.00%
Bootstrap support for C0P045 as seed ortholog is 100%.
Bootstrap support for Q8LL16 as seed ortholog is 100%.

Group of orthologs #1071. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 C.reinhardtii:139

C0NFR6              	100.00%		A8HRV5              	100.00%
Bootstrap support for C0NFR6 as seed ortholog is 100%.
Bootstrap support for A8HRV5 as seed ortholog is 100%.

Group of orthologs #1072. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 C.reinhardtii:139

C0NG60              	100.00%		A8HUC0              	100.00%
Bootstrap support for C0NG60 as seed ortholog is 100%.
Bootstrap support for A8HUC0 as seed ortholog is 100%.

Group of orthologs #1073. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 C.reinhardtii:139

C0NHI4              	100.00%		A8I5V9              	100.00%
Bootstrap support for C0NHI4 as seed ortholog is 100%.
Bootstrap support for A8I5V9 as seed ortholog is 100%.

Group of orthologs #1074. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 C.reinhardtii:139

C0NKC8              	100.00%		A8IW01              	100.00%
Bootstrap support for C0NKC8 as seed ortholog is 100%.
Bootstrap support for A8IW01 as seed ortholog is 100%.

Group of orthologs #1075. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 C.reinhardtii:139

C0NTL8              	100.00%		A8IF69              	100.00%
Bootstrap support for C0NTL8 as seed ortholog is 100%.
Bootstrap support for A8IF69 as seed ortholog is 100%.

Group of orthologs #1076. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 C.reinhardtii:139

C0NCQ1              	100.00%		A8JF84              	100.00%
Bootstrap support for C0NCQ1 as seed ortholog is 100%.
Bootstrap support for A8JF84 as seed ortholog is 100%.

Group of orthologs #1077. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 C.reinhardtii:70

C0NJB8              	100.00%		A8JA38              	100.00%
Bootstrap support for C0NJB8 as seed ortholog is 100%.
Bootstrap support for A8JA38 as seed ortholog is 95%.

Group of orthologs #1078. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:7 C.reinhardtii:30

C0NP25              	100.00%		A8IYT3              	100.00%
                    	       		A8I2Y2              	16.63%
                    	       		A8J0I9              	5.61%
Bootstrap support for C0NP25 as seed ortholog is 54%.
Alternative seed ortholog is C0NT91 (7 bits away from this cluster)
Bootstrap support for A8IYT3 as seed ortholog is 85%.

Group of orthologs #1079. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 C.reinhardtii:138

C0NKT5              	100.00%		A8JCA4              	100.00%
                    	       		A8I108              	21.22%
Bootstrap support for C0NKT5 as seed ortholog is 100%.
Bootstrap support for A8JCA4 as seed ortholog is 100%.

Group of orthologs #1080. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 C.reinhardtii:138

C0NDB1              	100.00%		A8HYN9              	100.00%
Bootstrap support for C0NDB1 as seed ortholog is 100%.
Bootstrap support for A8HYN9 as seed ortholog is 100%.

Group of orthologs #1081. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 C.reinhardtii:138

C0NSC1              	100.00%		A8HPC5              	100.00%
Bootstrap support for C0NSC1 as seed ortholog is 100%.
Bootstrap support for A8HPC5 as seed ortholog is 100%.

Group of orthologs #1082. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 C.reinhardtii:138

C0NFX0              	100.00%		A8IVC2              	100.00%
Bootstrap support for C0NFX0 as seed ortholog is 100%.
Bootstrap support for A8IVC2 as seed ortholog is 100%.

Group of orthologs #1083. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 C.reinhardtii:82

C0NAW6              	100.00%		A8J1W4              	100.00%
Bootstrap support for C0NAW6 as seed ortholog is 100%.
Bootstrap support for A8J1W4 as seed ortholog is 99%.

Group of orthologs #1084. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 C.reinhardtii:138

C0NP92              	100.00%		A8IWL0              	100.00%
Bootstrap support for C0NP92 as seed ortholog is 100%.
Bootstrap support for A8IWL0 as seed ortholog is 100%.

Group of orthologs #1085. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 C.reinhardtii:138

C0NUV9              	100.00%		A8IM89              	100.00%
Bootstrap support for C0NUV9 as seed ortholog is 100%.
Bootstrap support for A8IM89 as seed ortholog is 100%.

Group of orthologs #1086. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 C.reinhardtii:138

C0NSH7              	100.00%		A8J5T0              	100.00%
Bootstrap support for C0NSH7 as seed ortholog is 100%.
Bootstrap support for A8J5T0 as seed ortholog is 100%.

Group of orthologs #1087. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 C.reinhardtii:138

C0NZU2              	100.00%		A8IY04              	100.00%
Bootstrap support for C0NZU2 as seed ortholog is 100%.
Bootstrap support for A8IY04 as seed ortholog is 100%.

Group of orthologs #1088. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:23 C.reinhardtii:138

C0NIN5              	100.00%		Q9LLJ1              	100.00%
Bootstrap support for C0NIN5 as seed ortholog is 73%.
Alternative seed ortholog is C0NE20 (23 bits away from this cluster)
Bootstrap support for Q9LLJ1 as seed ortholog is 100%.

Group of orthologs #1089. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 C.reinhardtii:138

C0NXQ0              	100.00%		A8JBE3              	100.00%
Bootstrap support for C0NXQ0 as seed ortholog is 100%.
Bootstrap support for A8JBE3 as seed ortholog is 100%.

Group of orthologs #1090. Best score 137 bits
Score difference with first non-orthologous sequence - A.capsulata:137 C.reinhardtii:137

C0NC11              	100.00%		A8HQW1              	100.00%
Bootstrap support for C0NC11 as seed ortholog is 100%.
Bootstrap support for A8HQW1 as seed ortholog is 100%.

Group of orthologs #1091. Best score 137 bits
Score difference with first non-orthologous sequence - A.capsulata:137 C.reinhardtii:137

C0NP15              	100.00%		A8I949              	100.00%
Bootstrap support for C0NP15 as seed ortholog is 100%.
Bootstrap support for A8I949 as seed ortholog is 100%.

Group of orthologs #1092. Best score 137 bits
Score difference with first non-orthologous sequence - A.capsulata:137 C.reinhardtii:137

C0NZR6              	100.00%		A8HMM6              	100.00%
Bootstrap support for C0NZR6 as seed ortholog is 100%.
Bootstrap support for A8HMM6 as seed ortholog is 100%.

Group of orthologs #1093. Best score 137 bits
Score difference with first non-orthologous sequence - A.capsulata:35 C.reinhardtii:40

C0NLI6              	100.00%		A8J856              	100.00%
Bootstrap support for C0NLI6 as seed ortholog is 92%.
Bootstrap support for A8J856 as seed ortholog is 94%.

Group of orthologs #1094. Best score 137 bits
Score difference with first non-orthologous sequence - A.capsulata:137 C.reinhardtii:137

C0NMI1              	100.00%		A8JGL4              	100.00%
Bootstrap support for C0NMI1 as seed ortholog is 100%.
Bootstrap support for A8JGL4 as seed ortholog is 100%.

Group of orthologs #1095. Best score 136 bits
Score difference with first non-orthologous sequence - A.capsulata:136 C.reinhardtii:136

C0NEU5              	100.00%		A8IXQ9              	100.00%
Bootstrap support for C0NEU5 as seed ortholog is 100%.
Bootstrap support for A8IXQ9 as seed ortholog is 100%.

Group of orthologs #1096. Best score 136 bits
Score difference with first non-orthologous sequence - A.capsulata:136 C.reinhardtii:136

C0P003              	100.00%		A8HW92              	100.00%
Bootstrap support for C0P003 as seed ortholog is 100%.
Bootstrap support for A8HW92 as seed ortholog is 100%.

Group of orthologs #1097. Best score 136 bits
Score difference with first non-orthologous sequence - A.capsulata:136 C.reinhardtii:136

C0NPG0              	100.00%		A8IZ74              	100.00%
Bootstrap support for C0NPG0 as seed ortholog is 100%.
Bootstrap support for A8IZ74 as seed ortholog is 100%.

Group of orthologs #1098. Best score 136 bits
Score difference with first non-orthologous sequence - A.capsulata:136 C.reinhardtii:136

C0NN10              	100.00%		A8J2X5              	100.00%
Bootstrap support for C0NN10 as seed ortholog is 100%.
Bootstrap support for A8J2X5 as seed ortholog is 100%.

Group of orthologs #1099. Best score 136 bits
Score difference with first non-orthologous sequence - A.capsulata:136 C.reinhardtii:136

C0NUL8              	100.00%		A8J2P8              	100.00%
Bootstrap support for C0NUL8 as seed ortholog is 100%.
Bootstrap support for A8J2P8 as seed ortholog is 100%.

Group of orthologs #1100. Best score 136 bits
Score difference with first non-orthologous sequence - A.capsulata:63 C.reinhardtii:93

C0NW05              	100.00%		A8JBL7              	100.00%
Bootstrap support for C0NW05 as seed ortholog is 95%.
Bootstrap support for A8JBL7 as seed ortholog is 99%.

Group of orthologs #1101. Best score 135 bits
Score difference with first non-orthologous sequence - A.capsulata:135 C.reinhardtii:135

C0NU02              	100.00%		A8HYH9              	100.00%
                    	       		A8HM37              	16.42%
Bootstrap support for C0NU02 as seed ortholog is 100%.
Bootstrap support for A8HYH9 as seed ortholog is 100%.

Group of orthologs #1102. Best score 135 bits
Score difference with first non-orthologous sequence - A.capsulata:135 C.reinhardtii:135

C0NTW6              	100.00%		A8I5B9              	100.00%
Bootstrap support for C0NTW6 as seed ortholog is 100%.
Bootstrap support for A8I5B9 as seed ortholog is 100%.

Group of orthologs #1103. Best score 135 bits
Score difference with first non-orthologous sequence - A.capsulata:135 C.reinhardtii:135

C0NFN5              	100.00%		A8IZW5              	100.00%
Bootstrap support for C0NFN5 as seed ortholog is 100%.
Bootstrap support for A8IZW5 as seed ortholog is 100%.

Group of orthologs #1104. Best score 135 bits
Score difference with first non-orthologous sequence - A.capsulata:135 C.reinhardtii:135

C0P0M6              	100.00%		A8HXZ5              	100.00%
Bootstrap support for C0P0M6 as seed ortholog is 100%.
Bootstrap support for A8HXZ5 as seed ortholog is 100%.

Group of orthologs #1105. Best score 135 bits
Score difference with first non-orthologous sequence - A.capsulata:135 C.reinhardtii:135

C0NKQ4              	100.00%		A8J1C2              	100.00%
Bootstrap support for C0NKQ4 as seed ortholog is 100%.
Bootstrap support for A8J1C2 as seed ortholog is 100%.

Group of orthologs #1106. Best score 135 bits
Score difference with first non-orthologous sequence - A.capsulata:135 C.reinhardtii:135

C0NHU7              	100.00%		A8JBX6              	100.00%
Bootstrap support for C0NHU7 as seed ortholog is 100%.
Bootstrap support for A8JBX6 as seed ortholog is 100%.

Group of orthologs #1107. Best score 135 bits
Score difference with first non-orthologous sequence - A.capsulata:135 C.reinhardtii:135

C0NV62              	100.00%		A8J577              	100.00%
Bootstrap support for C0NV62 as seed ortholog is 100%.
Bootstrap support for A8J577 as seed ortholog is 100%.

Group of orthologs #1108. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 C.reinhardtii:134

C0P1C6              	100.00%		A8ITZ0              	100.00%
                    	       		A8J3Q5              	100.00%
Bootstrap support for C0P1C6 as seed ortholog is 100%.
Bootstrap support for A8ITZ0 as seed ortholog is 100%.
Bootstrap support for A8J3Q5 as seed ortholog is 100%.

Group of orthologs #1109. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 C.reinhardtii:134

C0NBL2              	100.00%		A8I403              	100.00%
Bootstrap support for C0NBL2 as seed ortholog is 100%.
Bootstrap support for A8I403 as seed ortholog is 100%.

Group of orthologs #1110. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 C.reinhardtii:134

C0NFG8              	100.00%		A8I074              	100.00%
Bootstrap support for C0NFG8 as seed ortholog is 100%.
Bootstrap support for A8I074 as seed ortholog is 100%.

Group of orthologs #1111. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 C.reinhardtii:134

C0NQN7              	100.00%		A8HVC8              	100.00%
Bootstrap support for C0NQN7 as seed ortholog is 100%.
Bootstrap support for A8HVC8 as seed ortholog is 100%.

Group of orthologs #1112. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 C.reinhardtii:134

C0P133              	100.00%		A8HP17              	100.00%
Bootstrap support for C0P133 as seed ortholog is 100%.
Bootstrap support for A8HP17 as seed ortholog is 100%.

Group of orthologs #1113. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 C.reinhardtii:134

C0NAW7              	100.00%		A8J8I6              	100.00%
Bootstrap support for C0NAW7 as seed ortholog is 100%.
Bootstrap support for A8J8I6 as seed ortholog is 100%.

Group of orthologs #1114. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 C.reinhardtii:14

C0NGL4              	100.00%		A8JIH7              	100.00%
                    	       		A8J101              	18.78%
                    	       		A8J5F0              	16.57%
Bootstrap support for C0NGL4 as seed ortholog is 100%.
Bootstrap support for A8JIH7 as seed ortholog is 68%.
Alternative seed ortholog is A8J0P8 (14 bits away from this cluster)

Group of orthologs #1115. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 C.reinhardtii:133

C0NWW0              	100.00%		A8JC43              	100.00%
C0NZA9              	19.79%		
C0NIT9              	7.04%		
Bootstrap support for C0NWW0 as seed ortholog is 100%.
Bootstrap support for A8JC43 as seed ortholog is 100%.

Group of orthologs #1116. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 C.reinhardtii:44

C0NBP5              	100.00%		A8HWF0              	100.00%
Bootstrap support for C0NBP5 as seed ortholog is 100%.
Bootstrap support for A8HWF0 as seed ortholog is 91%.

Group of orthologs #1117. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 C.reinhardtii:133

C0NBA0              	100.00%		A8I678              	100.00%
Bootstrap support for C0NBA0 as seed ortholog is 100%.
Bootstrap support for A8I678 as seed ortholog is 100%.

Group of orthologs #1118. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 C.reinhardtii:133

C0NE37              	100.00%		A8IRU1              	100.00%
Bootstrap support for C0NE37 as seed ortholog is 100%.
Bootstrap support for A8IRU1 as seed ortholog is 100%.

Group of orthologs #1119. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 C.reinhardtii:133

C0NCL2              	100.00%		A8J2C4              	100.00%
Bootstrap support for C0NCL2 as seed ortholog is 100%.
Bootstrap support for A8J2C4 as seed ortholog is 100%.

Group of orthologs #1120. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:17 C.reinhardtii:133

C0NDQ0              	100.00%		A8J1B8              	100.00%
Bootstrap support for C0NDQ0 as seed ortholog is 63%.
Alternative seed ortholog is C0NZZ9 (17 bits away from this cluster)
Bootstrap support for A8J1B8 as seed ortholog is 100%.

Group of orthologs #1121. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 C.reinhardtii:133

C0NV41              	100.00%		A8I9U6              	100.00%
Bootstrap support for C0NV41 as seed ortholog is 100%.
Bootstrap support for A8I9U6 as seed ortholog is 100%.

Group of orthologs #1122. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 C.reinhardtii:133

C0NHQ9              	100.00%		A8J4I9              	100.00%
Bootstrap support for C0NHQ9 as seed ortholog is 100%.
Bootstrap support for A8J4I9 as seed ortholog is 100%.

Group of orthologs #1123. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 C.reinhardtii:65

C0NCC4              	100.00%		A8JH45              	100.00%
Bootstrap support for C0NCC4 as seed ortholog is 100%.
Bootstrap support for A8JH45 as seed ortholog is 99%.

Group of orthologs #1124. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:67 C.reinhardtii:132

C0NHF1              	100.00%		A8IRR3              	100.00%
C0NQ59              	100.00%		A8IRR2              	100.00%
C0NXS8              	19.98%		
Bootstrap support for C0NHF1 as seed ortholog is 92%.
Bootstrap support for C0NQ59 as seed ortholog is 54%.
Alternative seed ortholog is C0NKT2 (67 bits away from this cluster)
Bootstrap support for A8IRR3 as seed ortholog is 100%.
Bootstrap support for A8IRR2 as seed ortholog is 100%.

Group of orthologs #1125. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:132 C.reinhardtii:132

C0NIN8              	100.00%		A8J0G9              	100.00%
C0NDH8              	6.37%		A8J0I1              	30.86%
Bootstrap support for C0NIN8 as seed ortholog is 100%.
Bootstrap support for A8J0G9 as seed ortholog is 100%.

Group of orthologs #1126. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:132 C.reinhardtii:1

C0NFM2              	100.00%		A8HQT1              	100.00%
Bootstrap support for C0NFM2 as seed ortholog is 100%.
Bootstrap support for A8HQT1 as seed ortholog is 56%.
Alternative seed ortholog is A8IHI1 (1 bits away from this cluster)

Group of orthologs #1127. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:132 C.reinhardtii:79

C0NFC3              	100.00%		A8HXD0              	100.00%
Bootstrap support for C0NFC3 as seed ortholog is 100%.
Bootstrap support for A8HXD0 as seed ortholog is 99%.

Group of orthologs #1128. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:47 C.reinhardtii:132

C0NBT9              	100.00%		A8JAR5              	100.00%
Bootstrap support for C0NBT9 as seed ortholog is 78%.
Bootstrap support for A8JAR5 as seed ortholog is 100%.

Group of orthologs #1129. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:132 C.reinhardtii:132

C0NM02              	100.00%		A8JGC0              	100.00%
Bootstrap support for C0NM02 as seed ortholog is 100%.
Bootstrap support for A8JGC0 as seed ortholog is 100%.

Group of orthologs #1130. Best score 131 bits
Score difference with first non-orthologous sequence - A.capsulata:10 C.reinhardtii:131

C0NKV9              	100.00%		A8HXA9              	100.00%
Bootstrap support for C0NKV9 as seed ortholog is 61%.
Alternative seed ortholog is C0NIZ9 (10 bits away from this cluster)
Bootstrap support for A8HXA9 as seed ortholog is 100%.

Group of orthologs #1131. Best score 131 bits
Score difference with first non-orthologous sequence - A.capsulata:131 C.reinhardtii:131

C0NY06              	100.00%		A8I0E2              	100.00%
Bootstrap support for C0NY06 as seed ortholog is 100%.
Bootstrap support for A8I0E2 as seed ortholog is 100%.

Group of orthologs #1132. Best score 131 bits
Score difference with first non-orthologous sequence - A.capsulata:131 C.reinhardtii:131

C0NRV0              	100.00%		A8IV35              	100.00%
Bootstrap support for C0NRV0 as seed ortholog is 100%.
Bootstrap support for A8IV35 as seed ortholog is 100%.

Group of orthologs #1133. Best score 131 bits
Score difference with first non-orthologous sequence - A.capsulata:131 C.reinhardtii:131

C0NGR7              	100.00%		A8JD74              	100.00%
Bootstrap support for C0NGR7 as seed ortholog is 100%.
Bootstrap support for A8JD74 as seed ortholog is 100%.

Group of orthologs #1134. Best score 131 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.reinhardtii:54

C0NH14              	100.00%		Q39568              	100.00%
Bootstrap support for C0NH14 as seed ortholog is 97%.
Bootstrap support for Q39568 as seed ortholog is 95%.

Group of orthologs #1135. Best score 130 bits
Score difference with first non-orthologous sequence - A.capsulata:40 C.reinhardtii:48

C0NFS5              	100.00%		A8J2A5              	100.00%
Bootstrap support for C0NFS5 as seed ortholog is 81%.
Bootstrap support for A8J2A5 as seed ortholog is 84%.

Group of orthologs #1136. Best score 130 bits
Score difference with first non-orthologous sequence - A.capsulata:130 C.reinhardtii:130

C0NZY6              	100.00%		A8I2D0              	100.00%
Bootstrap support for C0NZY6 as seed ortholog is 100%.
Bootstrap support for A8I2D0 as seed ortholog is 100%.

Group of orthologs #1137. Best score 130 bits
Score difference with first non-orthologous sequence - A.capsulata:130 C.reinhardtii:130

C0NFL8              	100.00%		A8JB74              	100.00%
Bootstrap support for C0NFL8 as seed ortholog is 100%.
Bootstrap support for A8JB74 as seed ortholog is 100%.

Group of orthologs #1138. Best score 130 bits
Score difference with first non-orthologous sequence - A.capsulata:36 C.reinhardtii:2

C0NH63              	100.00%		A8JA95              	100.00%
Bootstrap support for C0NH63 as seed ortholog is 77%.
Bootstrap support for A8JA95 as seed ortholog is 48%.
Alternative seed ortholog is A8JI17 (2 bits away from this cluster)

Group of orthologs #1139. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 C.reinhardtii:61

C0P0E0              	100.00%		Q84XW3              	100.00%
                    	       		Q7XJ66              	37.40%
                    	       		A8HN02              	13.30%
                    	       		A8JFB4              	11.11%
Bootstrap support for C0P0E0 as seed ortholog is 100%.
Bootstrap support for Q84XW3 as seed ortholog is 99%.

Group of orthologs #1140. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:10 C.reinhardtii:45

C0NMM6              	100.00%		Q84X75              	100.00%
C0NXU5              	14.21%		
Bootstrap support for C0NMM6 as seed ortholog is 61%.
Alternative seed ortholog is C0NSN2 (10 bits away from this cluster)
Bootstrap support for Q84X75 as seed ortholog is 93%.

Group of orthologs #1141. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 C.reinhardtii:129

C0NE77              	100.00%		A8II85              	100.00%
Bootstrap support for C0NE77 as seed ortholog is 100%.
Bootstrap support for A8II85 as seed ortholog is 100%.

Group of orthologs #1142. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 C.reinhardtii:129

C0NN35              	100.00%		A8I2Y4              	100.00%
Bootstrap support for C0NN35 as seed ortholog is 100%.
Bootstrap support for A8I2Y4 as seed ortholog is 100%.

Group of orthologs #1143. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 C.reinhardtii:129

C0NBB0              	100.00%		A8J0V7              	100.00%
Bootstrap support for C0NBB0 as seed ortholog is 100%.
Bootstrap support for A8J0V7 as seed ortholog is 100%.

Group of orthologs #1144. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 C.reinhardtii:129

C0NI45              	100.00%		A8IW25              	100.00%
Bootstrap support for C0NI45 as seed ortholog is 100%.
Bootstrap support for A8IW25 as seed ortholog is 100%.

Group of orthologs #1145. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 C.reinhardtii:129

C0NNR2              	100.00%		A8J757              	100.00%
Bootstrap support for C0NNR2 as seed ortholog is 100%.
Bootstrap support for A8J757 as seed ortholog is 100%.

Group of orthologs #1146. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 C.reinhardtii:129

C0NFE2              	100.00%		A8JHV0              	100.00%
Bootstrap support for C0NFE2 as seed ortholog is 100%.
Bootstrap support for A8JHV0 as seed ortholog is 100%.

Group of orthologs #1147. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 C.reinhardtii:129

C0NG49              	100.00%		Q6U9W9              	100.00%
Bootstrap support for C0NG49 as seed ortholog is 100%.
Bootstrap support for Q6U9W9 as seed ortholog is 100%.

Group of orthologs #1148. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 C.reinhardtii:129

C0NWS9              	100.00%		A8JCG8              	100.00%
Bootstrap support for C0NWS9 as seed ortholog is 100%.
Bootstrap support for A8JCG8 as seed ortholog is 100%.

Group of orthologs #1149. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:54 C.reinhardtii:128

C0NE73              	100.00%		A8IF06              	100.00%
Bootstrap support for C0NE73 as seed ortholog is 82%.
Bootstrap support for A8IF06 as seed ortholog is 100%.

Group of orthologs #1150. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 C.reinhardtii:128

C0NEZ8              	100.00%		A8ITF5              	100.00%
Bootstrap support for C0NEZ8 as seed ortholog is 100%.
Bootstrap support for A8ITF5 as seed ortholog is 100%.

Group of orthologs #1151. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 C.reinhardtii:128

C0NV14              	100.00%		A8I4K4              	100.00%
Bootstrap support for C0NV14 as seed ortholog is 100%.
Bootstrap support for A8I4K4 as seed ortholog is 100%.

Group of orthologs #1152. Best score 127 bits
Score difference with first non-orthologous sequence - A.capsulata:127 C.reinhardtii:127

C0NFV7              	100.00%		A8J0R4              	100.00%
Bootstrap support for C0NFV7 as seed ortholog is 100%.
Bootstrap support for A8J0R4 as seed ortholog is 100%.

Group of orthologs #1153. Best score 127 bits
Score difference with first non-orthologous sequence - A.capsulata:127 C.reinhardtii:86

C0NCK5              	100.00%		A8J7F5              	100.00%
Bootstrap support for C0NCK5 as seed ortholog is 100%.
Bootstrap support for A8J7F5 as seed ortholog is 99%.

Group of orthologs #1154. Best score 127 bits
Score difference with first non-orthologous sequence - A.capsulata:127 C.reinhardtii:127

C0NTW2              	100.00%		A8JHA6              	100.00%
Bootstrap support for C0NTW2 as seed ortholog is 100%.
Bootstrap support for A8JHA6 as seed ortholog is 100%.

Group of orthologs #1155. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 C.reinhardtii:34

C0NSX5              	100.00%		A8J924              	100.00%
                    	       		A8IT75              	9.21%
Bootstrap support for C0NSX5 as seed ortholog is 100%.
Bootstrap support for A8J924 as seed ortholog is 84%.

Group of orthologs #1156. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 C.reinhardtii:126

C0NXQ7              	100.00%		A8J576              	100.00%
                    	       		A8J0V6              	14.81%
Bootstrap support for C0NXQ7 as seed ortholog is 100%.
Bootstrap support for A8J576 as seed ortholog is 100%.

Group of orthologs #1157. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 C.reinhardtii:126

C0NK10              	100.00%		A8INB8              	100.00%
Bootstrap support for C0NK10 as seed ortholog is 100%.
Bootstrap support for A8INB8 as seed ortholog is 100%.

Group of orthologs #1158. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 C.reinhardtii:126

C0NSY3              	100.00%		A8I7J0              	100.00%
Bootstrap support for C0NSY3 as seed ortholog is 100%.
Bootstrap support for A8I7J0 as seed ortholog is 100%.

Group of orthologs #1159. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 C.reinhardtii:126

C0NDA4              	100.00%		A8J7M2              	100.00%
Bootstrap support for C0NDA4 as seed ortholog is 100%.
Bootstrap support for A8J7M2 as seed ortholog is 100%.

Group of orthologs #1160. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 C.reinhardtii:11

C0NFT0              	100.00%		A8J6G9              	100.00%
Bootstrap support for C0NFT0 as seed ortholog is 100%.
Bootstrap support for A8J6G9 as seed ortholog is 67%.
Alternative seed ortholog is A8ICE4 (11 bits away from this cluster)

Group of orthologs #1161. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 C.reinhardtii:126

C0NXJ0              	100.00%		A8IMK5              	100.00%
Bootstrap support for C0NXJ0 as seed ortholog is 100%.
Bootstrap support for A8IMK5 as seed ortholog is 100%.

Group of orthologs #1162. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 C.reinhardtii:126

C0NM44              	100.00%		A8J7Q4              	100.00%
Bootstrap support for C0NM44 as seed ortholog is 100%.
Bootstrap support for A8J7Q4 as seed ortholog is 100%.

Group of orthologs #1163. Best score 125 bits
Score difference with first non-orthologous sequence - A.capsulata:125 C.reinhardtii:40

C0NVW8              	100.00%		A8J740              	100.00%
                    	       		A8J741              	12.50%
                    	       		A8J746              	9.72%
Bootstrap support for C0NVW8 as seed ortholog is 100%.
Bootstrap support for A8J740 as seed ortholog is 97%.

Group of orthologs #1164. Best score 125 bits
Score difference with first non-orthologous sequence - A.capsulata:125 C.reinhardtii:125

C0NAF8              	100.00%		A8IVF0              	100.00%
Bootstrap support for C0NAF8 as seed ortholog is 100%.
Bootstrap support for A8IVF0 as seed ortholog is 100%.

Group of orthologs #1165. Best score 125 bits
Score difference with first non-orthologous sequence - A.capsulata:125 C.reinhardtii:125

C0NII2              	100.00%		A8IWT0              	100.00%
Bootstrap support for C0NII2 as seed ortholog is 100%.
Bootstrap support for A8IWT0 as seed ortholog is 100%.

Group of orthologs #1166. Best score 125 bits
Score difference with first non-orthologous sequence - A.capsulata:125 C.reinhardtii:125

C0NIW1              	100.00%		A8J507              	100.00%
Bootstrap support for C0NIW1 as seed ortholog is 100%.
Bootstrap support for A8J507 as seed ortholog is 100%.

Group of orthologs #1167. Best score 125 bits
Score difference with first non-orthologous sequence - A.capsulata:5 C.reinhardtii:39

C0NEB3              	100.00%		A8JBR9              	100.00%
Bootstrap support for C0NEB3 as seed ortholog is 53%.
Alternative seed ortholog is C0NVF2 (5 bits away from this cluster)
Bootstrap support for A8JBR9 as seed ortholog is 80%.

Group of orthologs #1168. Best score 125 bits
Score difference with first non-orthologous sequence - A.capsulata:125 C.reinhardtii:60

C0NJY9              	100.00%		A8JAQ9              	100.00%
Bootstrap support for C0NJY9 as seed ortholog is 100%.
Bootstrap support for A8JAQ9 as seed ortholog is 94%.

Group of orthologs #1169. Best score 125 bits
Score difference with first non-orthologous sequence - A.capsulata:125 C.reinhardtii:125

C0P085              	100.00%		A8J3I2              	100.00%
Bootstrap support for C0P085 as seed ortholog is 100%.
Bootstrap support for A8J3I2 as seed ortholog is 100%.

Group of orthologs #1170. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:124 C.reinhardtii:62

C0NE30              	100.00%		Q695H0              	100.00%
C0NIB4              	11.18%		A8J8T7              	10.20%
                    	       		A8JDQ7              	5.23%
Bootstrap support for C0NE30 as seed ortholog is 100%.
Bootstrap support for Q695H0 as seed ortholog is 84%.

Group of orthologs #1171. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:124 C.reinhardtii:124

C0NI63              	100.00%		A8HYS4              	100.00%
                    	       		A8J891              	39.63%
                    	       		A8J8B7              	30.55%
Bootstrap support for C0NI63 as seed ortholog is 100%.
Bootstrap support for A8HYS4 as seed ortholog is 100%.

Group of orthologs #1172. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:124 C.reinhardtii:124

C0NSV7              	100.00%		A8HM76              	100.00%
C0NBI5              	16.18%		A8J9M4              	16.60%
Bootstrap support for C0NSV7 as seed ortholog is 100%.
Bootstrap support for A8HM76 as seed ortholog is 100%.

Group of orthologs #1173. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:124 C.reinhardtii:62

C0NBE0              	100.00%		A8I9M1              	100.00%
C0NEH9              	25.72%		
Bootstrap support for C0NBE0 as seed ortholog is 100%.
Bootstrap support for A8I9M1 as seed ortholog is 93%.

Group of orthologs #1174. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:24 C.reinhardtii:5

C0NJP0              	100.00%		A8HPR9              	100.00%
C0NFN0              	13.25%		
Bootstrap support for C0NJP0 as seed ortholog is 94%.
Bootstrap support for A8HPR9 as seed ortholog is 55%.
Alternative seed ortholog is A8IPI7 (5 bits away from this cluster)

Group of orthologs #1175. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:124 C.reinhardtii:124

C0NQ68              	100.00%		A8IW47              	100.00%
Bootstrap support for C0NQ68 as seed ortholog is 100%.
Bootstrap support for A8IW47 as seed ortholog is 100%.

Group of orthologs #1176. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:124 C.reinhardtii:124

C0NF20              	100.00%		A8J8J1              	100.00%
Bootstrap support for C0NF20 as seed ortholog is 100%.
Bootstrap support for A8J8J1 as seed ortholog is 100%.

Group of orthologs #1177. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:124 C.reinhardtii:124

C0NI70              	100.00%		A8J7K9              	100.00%
Bootstrap support for C0NI70 as seed ortholog is 100%.
Bootstrap support for A8J7K9 as seed ortholog is 100%.

Group of orthologs #1178. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:124 C.reinhardtii:124

C0NCE8              	100.00%		A8JH99              	100.00%
Bootstrap support for C0NCE8 as seed ortholog is 100%.
Bootstrap support for A8JH99 as seed ortholog is 100%.

Group of orthologs #1179. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.reinhardtii:19

C0NF06              	100.00%		A8JGJ4              	100.00%
                    	       		A8HT76              	6.41%
Bootstrap support for C0NF06 as seed ortholog is 79%.
Bootstrap support for A8JGJ4 as seed ortholog is 51%.
Alternative seed ortholog is A8IRA4 (19 bits away from this cluster)

Group of orthologs #1180. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:123 C.reinhardtii:123

C0NJW8              	100.00%		A8HTH0              	100.00%
Bootstrap support for C0NJW8 as seed ortholog is 100%.
Bootstrap support for A8HTH0 as seed ortholog is 100%.

Group of orthologs #1181. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:123 C.reinhardtii:123

C0NYQ1              	100.00%		A8HNQ6              	100.00%
Bootstrap support for C0NYQ1 as seed ortholog is 100%.
Bootstrap support for A8HNQ6 as seed ortholog is 100%.

Group of orthologs #1182. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:123 C.reinhardtii:123

C0NLG4              	100.00%		A8IQT7              	100.00%
Bootstrap support for C0NLG4 as seed ortholog is 100%.
Bootstrap support for A8IQT7 as seed ortholog is 100%.

Group of orthologs #1183. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:123 C.reinhardtii:123

C0NRS6              	100.00%		A8IHQ7              	100.00%
Bootstrap support for C0NRS6 as seed ortholog is 100%.
Bootstrap support for A8IHQ7 as seed ortholog is 100%.

Group of orthologs #1184. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:123 C.reinhardtii:123

C0NDU6              	100.00%		A8JB15              	100.00%
Bootstrap support for C0NDU6 as seed ortholog is 100%.
Bootstrap support for A8JB15 as seed ortholog is 100%.

Group of orthologs #1185. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:123 C.reinhardtii:123

C0NCP1              	100.00%		A8JET7              	100.00%
Bootstrap support for C0NCP1 as seed ortholog is 100%.
Bootstrap support for A8JET7 as seed ortholog is 100%.

Group of orthologs #1186. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:21 C.reinhardtii:43

C0NZK2              	100.00%		A8JES7              	100.00%
Bootstrap support for C0NZK2 as seed ortholog is 64%.
Alternative seed ortholog is C0NHC4 (21 bits away from this cluster)
Bootstrap support for A8JES7 as seed ortholog is 93%.

Group of orthologs #1187. Best score 122 bits
Score difference with first non-orthologous sequence - A.capsulata:39 C.reinhardtii:122

C0NRJ9              	100.00%		A8HZQ4              	100.00%
                    	       		A8HPG8              	35.68%
Bootstrap support for C0NRJ9 as seed ortholog is 92%.
Bootstrap support for A8HZQ4 as seed ortholog is 100%.

Group of orthologs #1188. Best score 122 bits
Score difference with first non-orthologous sequence - A.capsulata:122 C.reinhardtii:122

C0NRQ3              	100.00%		A8ITT6              	100.00%
Bootstrap support for C0NRQ3 as seed ortholog is 100%.
Bootstrap support for A8ITT6 as seed ortholog is 100%.

Group of orthologs #1189. Best score 122 bits
Score difference with first non-orthologous sequence - A.capsulata:55 C.reinhardtii:33

C0NMU7              	100.00%		A8J2A1              	100.00%
Bootstrap support for C0NMU7 as seed ortholog is 91%.
Bootstrap support for A8J2A1 as seed ortholog is 81%.

Group of orthologs #1190. Best score 122 bits
Score difference with first non-orthologous sequence - A.capsulata:122 C.reinhardtii:122

C0NWR4              	100.00%		A8IRX8              	100.00%
Bootstrap support for C0NWR4 as seed ortholog is 100%.
Bootstrap support for A8IRX8 as seed ortholog is 100%.

Group of orthologs #1191. Best score 122 bits
Score difference with first non-orthologous sequence - A.capsulata:122 C.reinhardtii:122

C0NI22              	100.00%		A8JI94              	100.00%
Bootstrap support for C0NI22 as seed ortholog is 100%.
Bootstrap support for A8JI94 as seed ortholog is 100%.

Group of orthologs #1192. Best score 121 bits
Score difference with first non-orthologous sequence - A.capsulata:121 C.reinhardtii:121

C0NN12              	100.00%		A8HQA9              	100.00%
                    	       		A8HMD4              	22.06%
Bootstrap support for C0NN12 as seed ortholog is 100%.
Bootstrap support for A8HQA9 as seed ortholog is 100%.

Group of orthologs #1193. Best score 121 bits
Score difference with first non-orthologous sequence - A.capsulata:121 C.reinhardtii:66

C0NXF4              	100.00%		A8HQM3              	100.00%
Bootstrap support for C0NXF4 as seed ortholog is 100%.
Bootstrap support for A8HQM3 as seed ortholog is 97%.

Group of orthologs #1194. Best score 121 bits
Score difference with first non-orthologous sequence - A.capsulata:121 C.reinhardtii:57

C0NIY1              	100.00%		A8IWN9              	100.00%
Bootstrap support for C0NIY1 as seed ortholog is 100%.
Bootstrap support for A8IWN9 as seed ortholog is 85%.

Group of orthologs #1195. Best score 121 bits
Score difference with first non-orthologous sequence - A.capsulata:13 C.reinhardtii:121

C0NVY1              	100.00%		A8IXR5              	100.00%
Bootstrap support for C0NVY1 as seed ortholog is 65%.
Alternative seed ortholog is C0NTL0 (13 bits away from this cluster)
Bootstrap support for A8IXR5 as seed ortholog is 100%.

Group of orthologs #1196. Best score 120 bits
Score difference with first non-orthologous sequence - A.capsulata:41 C.reinhardtii:120

C0NMT7              	100.00%		A8JFZ7              	100.00%
                    	       		A8JFZ4              	74.68%
                    	       		A8IFQ5              	11.71%
Bootstrap support for C0NMT7 as seed ortholog is 89%.
Bootstrap support for A8JFZ7 as seed ortholog is 100%.

Group of orthologs #1197. Best score 120 bits
Score difference with first non-orthologous sequence - A.capsulata:120 C.reinhardtii:120

C0NDG0              	100.00%		A8J956              	100.00%
Bootstrap support for C0NDG0 as seed ortholog is 100%.
Bootstrap support for A8J956 as seed ortholog is 100%.

Group of orthologs #1198. Best score 119 bits
Score difference with first non-orthologous sequence - A.capsulata:119 C.reinhardtii:119

C0NDZ0              	100.00%		A8JFU8              	100.00%
C0NVZ1              	100.00%		A8HSY2              	100.00%
C0NNR7              	22.15%		A8JD29              	11.93%
Bootstrap support for C0NDZ0 as seed ortholog is 100%.
Bootstrap support for C0NVZ1 as seed ortholog is 100%.
Bootstrap support for A8JFU8 as seed ortholog is 100%.
Bootstrap support for A8HSY2 as seed ortholog is 100%.

Group of orthologs #1199. Best score 119 bits
Score difference with first non-orthologous sequence - A.capsulata:119 C.reinhardtii:119

C0NEY0              	100.00%		A8HTX4              	100.00%
Bootstrap support for C0NEY0 as seed ortholog is 100%.
Bootstrap support for A8HTX4 as seed ortholog is 100%.

Group of orthologs #1200. Best score 119 bits
Score difference with first non-orthologous sequence - A.capsulata:119 C.reinhardtii:119

C0NJH0              	100.00%		A8IF01              	100.00%
Bootstrap support for C0NJH0 as seed ortholog is 100%.
Bootstrap support for A8IF01 as seed ortholog is 100%.

Group of orthologs #1201. Best score 119 bits
Score difference with first non-orthologous sequence - A.capsulata:119 C.reinhardtii:49

C0NE54              	100.00%		A8IY22              	100.00%
Bootstrap support for C0NE54 as seed ortholog is 100%.
Bootstrap support for A8IY22 as seed ortholog is 97%.

Group of orthologs #1202. Best score 119 bits
Score difference with first non-orthologous sequence - A.capsulata:119 C.reinhardtii:119

C0NXF9              	100.00%		A8ICF7              	100.00%
Bootstrap support for C0NXF9 as seed ortholog is 100%.
Bootstrap support for A8ICF7 as seed ortholog is 100%.

Group of orthologs #1203. Best score 119 bits
Score difference with first non-orthologous sequence - A.capsulata:119 C.reinhardtii:119

C0NV37              	100.00%		A8IPC9              	100.00%
Bootstrap support for C0NV37 as seed ortholog is 100%.
Bootstrap support for A8IPC9 as seed ortholog is 100%.

Group of orthologs #1204. Best score 119 bits
Score difference with first non-orthologous sequence - A.capsulata:119 C.reinhardtii:119

C0NPX3              	100.00%		A8JCP3              	100.00%
Bootstrap support for C0NPX3 as seed ortholog is 100%.
Bootstrap support for A8JCP3 as seed ortholog is 100%.

Group of orthologs #1205. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 C.reinhardtii:118

C0NAT8              	100.00%		A8I2Q4              	100.00%
                    	       		A8I2Q6              	89.89%
                    	       		A8JJP0              	88.25%
                    	       		A8JKB0              	47.27%
                    	       		A8JJN9              	37.43%
Bootstrap support for C0NAT8 as seed ortholog is 100%.
Bootstrap support for A8I2Q4 as seed ortholog is 100%.

Group of orthologs #1206. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:29 C.reinhardtii:118

C0NRG7              	100.00%		A8IPD2              	100.00%
                    	       		A8IP24              	44.24%
                    	       		A8J2S4              	40.00%
                    	       		A8J9D6              	19.61%
                    	       		A8JIT4              	14.19%
Bootstrap support for C0NRG7 as seed ortholog is 75%.
Bootstrap support for A8IPD2 as seed ortholog is 100%.

Group of orthologs #1207. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 C.reinhardtii:118

C0NDK3              	100.00%		A8HQ58              	100.00%
Bootstrap support for C0NDK3 as seed ortholog is 100%.
Bootstrap support for A8HQ58 as seed ortholog is 100%.

Group of orthologs #1208. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 C.reinhardtii:118

C0NCE2              	100.00%		A8I3E7              	100.00%
Bootstrap support for C0NCE2 as seed ortholog is 100%.
Bootstrap support for A8I3E7 as seed ortholog is 100%.

Group of orthologs #1209. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 C.reinhardtii:118

C0NJ41              	100.00%		A8HYD5              	100.00%
Bootstrap support for C0NJ41 as seed ortholog is 100%.
Bootstrap support for A8HYD5 as seed ortholog is 100%.

Group of orthologs #1210. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 C.reinhardtii:118

C0NJV2              	100.00%		A8IXT4              	100.00%
Bootstrap support for C0NJV2 as seed ortholog is 100%.
Bootstrap support for A8IXT4 as seed ortholog is 100%.

Group of orthologs #1211. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 C.reinhardtii:118

C0NEE6              	100.00%		A8J3R6              	100.00%
Bootstrap support for C0NEE6 as seed ortholog is 100%.
Bootstrap support for A8J3R6 as seed ortholog is 100%.

Group of orthologs #1212. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 C.reinhardtii:118

C0NQ42              	100.00%		A8IP53              	100.00%
Bootstrap support for C0NQ42 as seed ortholog is 100%.
Bootstrap support for A8IP53 as seed ortholog is 100%.

Group of orthologs #1213. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:76 C.reinhardtii:118

C0NZW3              	100.00%		A8J093              	100.00%
Bootstrap support for C0NZW3 as seed ortholog is 93%.
Bootstrap support for A8J093 as seed ortholog is 100%.

Group of orthologs #1214. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:35 C.reinhardtii:118

C0NQT7              	100.00%		A8JCP0              	100.00%
Bootstrap support for C0NQT7 as seed ortholog is 96%.
Bootstrap support for A8JCP0 as seed ortholog is 100%.

Group of orthologs #1215. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 C.reinhardtii:118

C0NPM0              	100.00%		A8JGX7              	100.00%
Bootstrap support for C0NPM0 as seed ortholog is 100%.
Bootstrap support for A8JGX7 as seed ortholog is 100%.

Group of orthologs #1216. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:4 C.reinhardtii:5

C0NYS0              	100.00%		A8JB79              	100.00%
Bootstrap support for C0NYS0 as seed ortholog is 51%.
Alternative seed ortholog is C0NIT3 (4 bits away from this cluster)
Bootstrap support for A8JB79 as seed ortholog is 54%.
Alternative seed ortholog is A8J5J2 (5 bits away from this cluster)

Group of orthologs #1217. Best score 117 bits
Score difference with first non-orthologous sequence - A.capsulata:30 C.reinhardtii:117

C0NXJ9              	100.00%		A8HNR0              	100.00%
                    	       		A8ITR3              	44.11%
                    	       		A8JFT6              	35.51%
                    	       		A8JFT7              	34.95%
Bootstrap support for C0NXJ9 as seed ortholog is 75%.
Bootstrap support for A8HNR0 as seed ortholog is 100%.

Group of orthologs #1218. Best score 117 bits
Score difference with first non-orthologous sequence - A.capsulata:117 C.reinhardtii:117

C0NUN0              	100.00%		A8JAC9              	100.00%
                    	       		A8HZF2              	14.95%
                    	       		A8I0T2              	9.47%
Bootstrap support for C0NUN0 as seed ortholog is 100%.
Bootstrap support for A8JAC9 as seed ortholog is 100%.

Group of orthologs #1219. Best score 117 bits
Score difference with first non-orthologous sequence - A.capsulata:117 C.reinhardtii:117

C0NEN0              	100.00%		A8ICX2              	100.00%
Bootstrap support for C0NEN0 as seed ortholog is 100%.
Bootstrap support for A8ICX2 as seed ortholog is 100%.

Group of orthologs #1220. Best score 117 bits
Score difference with first non-orthologous sequence - A.capsulata:117 C.reinhardtii:117

C0NGE3              	100.00%		A8IS22              	100.00%
Bootstrap support for C0NGE3 as seed ortholog is 100%.
Bootstrap support for A8IS22 as seed ortholog is 100%.

Group of orthologs #1221. Best score 117 bits
Score difference with first non-orthologous sequence - A.capsulata:117 C.reinhardtii:117

C0NFH9              	100.00%		A8J8R7              	100.00%
Bootstrap support for C0NFH9 as seed ortholog is 100%.
Bootstrap support for A8J8R7 as seed ortholog is 100%.

Group of orthologs #1222. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.reinhardtii:116

C0ND35              	100.00%		A8IYS5              	100.00%
C0NTH2              	25.53%		
C0P0M9              	19.77%		
C0NQN9              	19.27%		
Bootstrap support for C0ND35 as seed ortholog is 100%.
Bootstrap support for A8IYS5 as seed ortholog is 100%.

Group of orthologs #1223. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.reinhardtii:116

C0NFA0              	100.00%		A8JBW4              	100.00%
                    	       		A8J0N4              	20.62%
                    	       		A8J587              	5.00%
Bootstrap support for C0NFA0 as seed ortholog is 100%.
Bootstrap support for A8JBW4 as seed ortholog is 100%.

Group of orthologs #1224. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.reinhardtii:116

C0NCP3              	100.00%		A8ICT1              	100.00%
Bootstrap support for C0NCP3 as seed ortholog is 100%.
Bootstrap support for A8ICT1 as seed ortholog is 100%.

Group of orthologs #1225. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.reinhardtii:116

C0NLG3              	100.00%		A8HWS3              	100.00%
Bootstrap support for C0NLG3 as seed ortholog is 100%.
Bootstrap support for A8HWS3 as seed ortholog is 100%.

Group of orthologs #1226. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.reinhardtii:75

C0NMQ0              	100.00%		A8HVG5              	100.00%
Bootstrap support for C0NMQ0 as seed ortholog is 100%.
Bootstrap support for A8HVG5 as seed ortholog is 99%.

Group of orthologs #1227. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.reinhardtii:25

C0NAX1              	100.00%		A8IUM9              	100.00%
Bootstrap support for C0NAX1 as seed ortholog is 100%.
Bootstrap support for A8IUM9 as seed ortholog is 87%.

Group of orthologs #1228. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.reinhardtii:116

C0NFT6              	100.00%		A8J0D6              	100.00%
Bootstrap support for C0NFT6 as seed ortholog is 100%.
Bootstrap support for A8J0D6 as seed ortholog is 100%.

Group of orthologs #1229. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.reinhardtii:116

C0NFF5              	100.00%		A8J2W3              	100.00%
Bootstrap support for C0NFF5 as seed ortholog is 100%.
Bootstrap support for A8J2W3 as seed ortholog is 100%.

Group of orthologs #1230. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.reinhardtii:116

C0NRE5              	100.00%		A8IWB5              	100.00%
Bootstrap support for C0NRE5 as seed ortholog is 100%.
Bootstrap support for A8IWB5 as seed ortholog is 100%.

Group of orthologs #1231. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.reinhardtii:116

C0NJ27              	100.00%		A8J804              	100.00%
Bootstrap support for C0NJ27 as seed ortholog is 100%.
Bootstrap support for A8J804 as seed ortholog is 100%.

Group of orthologs #1232. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.reinhardtii:116

C0NIU4              	100.00%		A8JCR6              	100.00%
Bootstrap support for C0NIU4 as seed ortholog is 100%.
Bootstrap support for A8JCR6 as seed ortholog is 100%.

Group of orthologs #1233. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:13 C.reinhardtii:12

C0NMP3              	100.00%		A8JB84              	100.00%
Bootstrap support for C0NMP3 as seed ortholog is 62%.
Alternative seed ortholog is C0NJS5 (13 bits away from this cluster)
Bootstrap support for A8JB84 as seed ortholog is 62%.
Alternative seed ortholog is A8I8R5 (12 bits away from this cluster)

Group of orthologs #1234. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 C.reinhardtii:116

C0NP71              	100.00%		A8J9X6              	100.00%
Bootstrap support for C0NP71 as seed ortholog is 100%.
Bootstrap support for A8J9X6 as seed ortholog is 100%.

Group of orthologs #1235. Best score 115 bits
Score difference with first non-orthologous sequence - A.capsulata:115 C.reinhardtii:115

C0NFD0              	100.00%		A8I5Y2              	100.00%
Bootstrap support for C0NFD0 as seed ortholog is 100%.
Bootstrap support for A8I5Y2 as seed ortholog is 100%.

Group of orthologs #1236. Best score 115 bits
Score difference with first non-orthologous sequence - A.capsulata:115 C.reinhardtii:115

C0NDB5              	100.00%		A8ICQ5              	100.00%
Bootstrap support for C0NDB5 as seed ortholog is 100%.
Bootstrap support for A8ICQ5 as seed ortholog is 100%.

Group of orthologs #1237. Best score 115 bits
Score difference with first non-orthologous sequence - A.capsulata:115 C.reinhardtii:115

C0NQ20              	100.00%		A8J3X5              	100.00%
Bootstrap support for C0NQ20 as seed ortholog is 100%.
Bootstrap support for A8J3X5 as seed ortholog is 100%.

Group of orthologs #1238. Best score 115 bits
Score difference with first non-orthologous sequence - A.capsulata:115 C.reinhardtii:115

C0NRH8              	100.00%		A8JHQ6              	100.00%
Bootstrap support for C0NRH8 as seed ortholog is 100%.
Bootstrap support for A8JHQ6 as seed ortholog is 100%.

Group of orthologs #1239. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:28 C.reinhardtii:114

C0NZ08              	100.00%		A8JBX8              	100.00%
                    	       		A8JBX9              	56.74%
                    	       		A8HQC8              	15.87%
Bootstrap support for C0NZ08 as seed ortholog is 76%.
Bootstrap support for A8JBX8 as seed ortholog is 100%.

Group of orthologs #1240. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:39 C.reinhardtii:114

C0NV90              	100.00%		A8HMC1              	100.00%
                    	       		A5YU14              	5.79%
Bootstrap support for C0NV90 as seed ortholog is 84%.
Bootstrap support for A8HMC1 as seed ortholog is 100%.

Group of orthologs #1241. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:114 C.reinhardtii:114

C0NKH3              	100.00%		A8J9M6              	100.00%
C0P036              	15.68%		
Bootstrap support for C0NKH3 as seed ortholog is 100%.
Bootstrap support for A8J9M6 as seed ortholog is 100%.

Group of orthologs #1242. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:114 C.reinhardtii:114

C0NEX5              	100.00%		A8HSS5              	100.00%
Bootstrap support for C0NEX5 as seed ortholog is 100%.
Bootstrap support for A8HSS5 as seed ortholog is 100%.

Group of orthologs #1243. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:114 C.reinhardtii:114

C0NHE0              	100.00%		A8ILG8              	100.00%
Bootstrap support for C0NHE0 as seed ortholog is 100%.
Bootstrap support for A8ILG8 as seed ortholog is 100%.

Group of orthologs #1244. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:114 C.reinhardtii:114

C0NVI1              	100.00%		A8IHQ2              	100.00%
Bootstrap support for C0NVI1 as seed ortholog is 100%.
Bootstrap support for A8IHQ2 as seed ortholog is 100%.

Group of orthologs #1245. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 C.reinhardtii:113

C0NIV5              	100.00%		A8IWP9              	100.00%
C0NMM5              	42.43%		
Bootstrap support for C0NIV5 as seed ortholog is 100%.
Bootstrap support for A8IWP9 as seed ortholog is 100%.

Group of orthologs #1246. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 C.reinhardtii:113

C0ND47              	100.00%		A8I645              	100.00%
Bootstrap support for C0ND47 as seed ortholog is 100%.
Bootstrap support for A8I645 as seed ortholog is 100%.

Group of orthologs #1247. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 C.reinhardtii:113

C0NM50              	100.00%		A8HPP9              	100.00%
Bootstrap support for C0NM50 as seed ortholog is 100%.
Bootstrap support for A8HPP9 as seed ortholog is 100%.

Group of orthologs #1248. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 C.reinhardtii:49

C0NVK2              	100.00%		A8HUK0              	100.00%
Bootstrap support for C0NVK2 as seed ortholog is 100%.
Bootstrap support for A8HUK0 as seed ortholog is 98%.

Group of orthologs #1249. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 C.reinhardtii:113

C0NIS3              	100.00%		A8IS57              	100.00%
Bootstrap support for C0NIS3 as seed ortholog is 100%.
Bootstrap support for A8IS57 as seed ortholog is 100%.

Group of orthologs #1250. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 C.reinhardtii:113

C0NIJ8              	100.00%		A8IZU8              	100.00%
Bootstrap support for C0NIJ8 as seed ortholog is 100%.
Bootstrap support for A8IZU8 as seed ortholog is 100%.

Group of orthologs #1251. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 C.reinhardtii:113

C0NIZ7              	100.00%		A8J0N3              	100.00%
Bootstrap support for C0NIZ7 as seed ortholog is 100%.
Bootstrap support for A8J0N3 as seed ortholog is 100%.

Group of orthologs #1252. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 C.reinhardtii:113

C0NRH5              	100.00%		A8J1A3              	100.00%
Bootstrap support for C0NRH5 as seed ortholog is 100%.
Bootstrap support for A8J1A3 as seed ortholog is 100%.

Group of orthologs #1253. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:44 C.reinhardtii:112

C0NQ12              	100.00%		A8IR40              	100.00%
Bootstrap support for C0NQ12 as seed ortholog is 83%.
Bootstrap support for A8IR40 as seed ortholog is 100%.

Group of orthologs #1254. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:112 C.reinhardtii:112

C0NI38              	100.00%		A8JEH2              	100.00%
Bootstrap support for C0NI38 as seed ortholog is 100%.
Bootstrap support for A8JEH2 as seed ortholog is 100%.

Group of orthologs #1255. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:111 C.reinhardtii:111

C0NV69              	100.00%		A8HQ72              	100.00%
                    	       		A8J8W6              	15.89%
Bootstrap support for C0NV69 as seed ortholog is 100%.
Bootstrap support for A8HQ72 as seed ortholog is 100%.

Group of orthologs #1256. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:111 C.reinhardtii:111

C0NAQ6              	100.00%		A8I0Y2              	100.00%
Bootstrap support for C0NAQ6 as seed ortholog is 100%.
Bootstrap support for A8I0Y2 as seed ortholog is 100%.

Group of orthologs #1257. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:111 C.reinhardtii:111

C0NJ60              	100.00%		A8HQ97              	100.00%
Bootstrap support for C0NJ60 as seed ortholog is 100%.
Bootstrap support for A8HQ97 as seed ortholog is 100%.

Group of orthologs #1258. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:111 C.reinhardtii:111

C0NFY8              	100.00%		A8IJZ3              	100.00%
Bootstrap support for C0NFY8 as seed ortholog is 100%.
Bootstrap support for A8IJZ3 as seed ortholog is 100%.

Group of orthologs #1259. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:111 C.reinhardtii:111

C0NGD9              	100.00%		A8JCC6              	100.00%
Bootstrap support for C0NGD9 as seed ortholog is 100%.
Bootstrap support for A8JCC6 as seed ortholog is 100%.

Group of orthologs #1260. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:111 C.reinhardtii:111

C0NW08              	100.00%		A8JEL8              	100.00%
Bootstrap support for C0NW08 as seed ortholog is 100%.
Bootstrap support for A8JEL8 as seed ortholog is 100%.

Group of orthologs #1261. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:111 C.reinhardtii:111

C0NZM8              	100.00%		A8JFU7              	100.00%
Bootstrap support for C0NZM8 as seed ortholog is 100%.
Bootstrap support for A8JFU7 as seed ortholog is 100%.

Group of orthologs #1262. Best score 110 bits
Score difference with first non-orthologous sequence - A.capsulata:110 C.reinhardtii:110

C0NT73              	100.00%		A8HPV7              	100.00%
Bootstrap support for C0NT73 as seed ortholog is 100%.
Bootstrap support for A8HPV7 as seed ortholog is 100%.

Group of orthologs #1263. Best score 110 bits
Score difference with first non-orthologous sequence - A.capsulata:26 C.reinhardtii:14

C0NU01              	100.00%		A8HWZ1              	100.00%
Bootstrap support for C0NU01 as seed ortholog is 65%.
Alternative seed ortholog is C0NIR4 (26 bits away from this cluster)
Bootstrap support for A8HWZ1 as seed ortholog is 43%.
Alternative seed ortholog is A8J0W7 (14 bits away from this cluster)

Group of orthologs #1264. Best score 110 bits
Score difference with first non-orthologous sequence - A.capsulata:44 C.reinhardtii:1

C0NHG3              	100.00%		A8J5Q5              	100.00%
Bootstrap support for C0NHG3 as seed ortholog is 91%.
Bootstrap support for A8J5Q5 as seed ortholog is 48%.
Alternative seed ortholog is A8JDW9 (1 bits away from this cluster)

Group of orthologs #1265. Best score 110 bits
Score difference with first non-orthologous sequence - A.capsulata:110 C.reinhardtii:43

C0NFE1              	100.00%		A8JBW3              	100.00%
Bootstrap support for C0NFE1 as seed ortholog is 100%.
Bootstrap support for A8JBW3 as seed ortholog is 92%.

Group of orthologs #1266. Best score 110 bits
Score difference with first non-orthologous sequence - A.capsulata:110 C.reinhardtii:110

C0P0R0              	100.00%		A8IIA2              	100.00%
Bootstrap support for C0P0R0 as seed ortholog is 100%.
Bootstrap support for A8IIA2 as seed ortholog is 100%.

Group of orthologs #1267. Best score 110 bits
Score difference with first non-orthologous sequence - A.capsulata:110 C.reinhardtii:110

C0NHG1              	100.00%		A8JEC1              	100.00%
Bootstrap support for C0NHG1 as seed ortholog is 100%.
Bootstrap support for A8JEC1 as seed ortholog is 100%.

Group of orthologs #1268. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 C.reinhardtii:23

C0NUZ2              	100.00%		A8HXE1              	100.00%
                    	       		A8J778              	7.84%
Bootstrap support for C0NUZ2 as seed ortholog is 100%.
Bootstrap support for A8HXE1 as seed ortholog is 95%.

Group of orthologs #1269. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 C.reinhardtii:109

C0NRU6              	100.00%		A8HP50              	100.00%
Bootstrap support for C0NRU6 as seed ortholog is 100%.
Bootstrap support for A8HP50 as seed ortholog is 100%.

Group of orthologs #1270. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 C.reinhardtii:109

C0NHM7              	100.00%		A8IPU0              	100.00%
Bootstrap support for C0NHM7 as seed ortholog is 100%.
Bootstrap support for A8IPU0 as seed ortholog is 100%.

Group of orthologs #1271. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 C.reinhardtii:109

C0NW84              	100.00%		A8HPH8              	100.00%
Bootstrap support for C0NW84 as seed ortholog is 100%.
Bootstrap support for A8HPH8 as seed ortholog is 100%.

Group of orthologs #1272. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 C.reinhardtii:109

C0NQH4              	100.00%		A8I795              	100.00%
Bootstrap support for C0NQH4 as seed ortholog is 100%.
Bootstrap support for A8I795 as seed ortholog is 100%.

Group of orthologs #1273. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 C.reinhardtii:109

C0NYR6              	100.00%		A8I586              	100.00%
Bootstrap support for C0NYR6 as seed ortholog is 100%.
Bootstrap support for A8I586 as seed ortholog is 100%.

Group of orthologs #1274. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 C.reinhardtii:109

C0NAB7              	100.00%		A8JHU2              	100.00%
Bootstrap support for C0NAB7 as seed ortholog is 100%.
Bootstrap support for A8JHU2 as seed ortholog is 100%.

Group of orthologs #1275. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:30 C.reinhardtii:108

C0NUH1              	100.00%		A8JGL3              	100.00%
                    	       		A8JGL7              	36.24%
                    	       		A8JGL6              	34.93%
                    	       		A8JGL5              	30.86%
                    	       		A8I7K6              	26.49%
                    	       		A8JJW2              	21.11%
Bootstrap support for C0NUH1 as seed ortholog is 75%.
Bootstrap support for A8JGL3 as seed ortholog is 100%.

Group of orthologs #1276. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 C.reinhardtii:108

C0ND94              	100.00%		A8I7Q4              	100.00%
                    	       		A8JH05              	100.00%
Bootstrap support for C0ND94 as seed ortholog is 100%.
Bootstrap support for A8I7Q4 as seed ortholog is 100%.
Bootstrap support for A8JH05 as seed ortholog is 100%.

Group of orthologs #1277. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 C.reinhardtii:108

C0NJ90              	100.00%		A8HNX3              	100.00%
Bootstrap support for C0NJ90 as seed ortholog is 100%.
Bootstrap support for A8HNX3 as seed ortholog is 100%.

Group of orthologs #1278. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 C.reinhardtii:108

C0NBA1              	100.00%		A8ISL4              	100.00%
Bootstrap support for C0NBA1 as seed ortholog is 100%.
Bootstrap support for A8ISL4 as seed ortholog is 100%.

Group of orthologs #1279. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:14 C.reinhardtii:108

C0NMX2              	100.00%		A8HXS9              	100.00%
Bootstrap support for C0NMX2 as seed ortholog is 62%.
Alternative seed ortholog is C0NF36 (14 bits away from this cluster)
Bootstrap support for A8HXS9 as seed ortholog is 100%.

Group of orthologs #1280. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 C.reinhardtii:108

C0NKG6              	100.00%		A8J2J5              	100.00%
Bootstrap support for C0NKG6 as seed ortholog is 100%.
Bootstrap support for A8J2J5 as seed ortholog is 100%.

Group of orthologs #1281. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 C.reinhardtii:108

C0NRM2              	100.00%		A8J028              	100.00%
Bootstrap support for C0NRM2 as seed ortholog is 100%.
Bootstrap support for A8J028 as seed ortholog is 100%.

Group of orthologs #1282. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 C.reinhardtii:48

C0NFD1              	100.00%		A8JIB4              	100.00%
Bootstrap support for C0NFD1 as seed ortholog is 100%.
Bootstrap support for A8JIB4 as seed ortholog is 92%.

Group of orthologs #1283. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 C.reinhardtii:108

C0NZ58              	100.00%		A8JDZ9              	100.00%
Bootstrap support for C0NZ58 as seed ortholog is 100%.
Bootstrap support for A8JDZ9 as seed ortholog is 100%.

Group of orthologs #1284. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:56 C.reinhardtii:37

C0P167              	100.00%		A8JFB0              	100.00%
Bootstrap support for C0P167 as seed ortholog is 96%.
Bootstrap support for A8JFB0 as seed ortholog is 85%.

Group of orthologs #1285. Best score 107 bits
Score difference with first non-orthologous sequence - A.capsulata:107 C.reinhardtii:107

C0NB70              	100.00%		A8J1V6              	100.00%
C0NEV6              	25.23%		A8I4L7              	28.31%
C0NY42              	22.91%		
Bootstrap support for C0NB70 as seed ortholog is 100%.
Bootstrap support for A8J1V6 as seed ortholog is 100%.

Group of orthologs #1286. Best score 107 bits
Score difference with first non-orthologous sequence - A.capsulata:107 C.reinhardtii:107

C0NWT0              	100.00%		A8HQ71              	100.00%
Bootstrap support for C0NWT0 as seed ortholog is 100%.
Bootstrap support for A8HQ71 as seed ortholog is 100%.

Group of orthologs #1287. Best score 107 bits
Score difference with first non-orthologous sequence - A.capsulata:107 C.reinhardtii:107

C0NFH6              	100.00%		A8IWL1              	100.00%
Bootstrap support for C0NFH6 as seed ortholog is 100%.
Bootstrap support for A8IWL1 as seed ortholog is 100%.

Group of orthologs #1288. Best score 107 bits
Score difference with first non-orthologous sequence - A.capsulata:107 C.reinhardtii:107

C0NTW0              	100.00%		A8I8E3              	100.00%
Bootstrap support for C0NTW0 as seed ortholog is 100%.
Bootstrap support for A8I8E3 as seed ortholog is 100%.

Group of orthologs #1289. Best score 107 bits
Score difference with first non-orthologous sequence - A.capsulata:107 C.reinhardtii:107

C0NNN7              	100.00%		A8ITW0              	100.00%
Bootstrap support for C0NNN7 as seed ortholog is 100%.
Bootstrap support for A8ITW0 as seed ortholog is 100%.

Group of orthologs #1290. Best score 107 bits
Score difference with first non-orthologous sequence - A.capsulata:107 C.reinhardtii:107

C0NP80              	100.00%		A8J8U5              	100.00%
Bootstrap support for C0NP80 as seed ortholog is 100%.
Bootstrap support for A8J8U5 as seed ortholog is 100%.

Group of orthologs #1291. Best score 107 bits
Score difference with first non-orthologous sequence - A.capsulata:107 C.reinhardtii:107

C0NQ76              	100.00%		A8JC18              	100.00%
Bootstrap support for C0NQ76 as seed ortholog is 100%.
Bootstrap support for A8JC18 as seed ortholog is 100%.

Group of orthologs #1292. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 C.reinhardtii:106

C0NSJ1              	100.00%		A8HPZ7              	100.00%
Bootstrap support for C0NSJ1 as seed ortholog is 100%.
Bootstrap support for A8HPZ7 as seed ortholog is 100%.

Group of orthologs #1293. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 C.reinhardtii:106

C0NH97              	100.00%		A8IRB6              	100.00%
Bootstrap support for C0NH97 as seed ortholog is 100%.
Bootstrap support for A8IRB6 as seed ortholog is 100%.

Group of orthologs #1294. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 C.reinhardtii:106

C0NPD3              	100.00%		A8IE61              	100.00%
Bootstrap support for C0NPD3 as seed ortholog is 100%.
Bootstrap support for A8IE61 as seed ortholog is 100%.

Group of orthologs #1295. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 C.reinhardtii:106

C0NUV3              	100.00%		A8I4N7              	100.00%
Bootstrap support for C0NUV3 as seed ortholog is 100%.
Bootstrap support for A8I4N7 as seed ortholog is 100%.

Group of orthologs #1296. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 C.reinhardtii:106

C0NN76              	100.00%		A8IWG3              	100.00%
Bootstrap support for C0NN76 as seed ortholog is 100%.
Bootstrap support for A8IWG3 as seed ortholog is 100%.

Group of orthologs #1297. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 C.reinhardtii:106

C0NQ46              	100.00%		A8J6F4              	100.00%
Bootstrap support for C0NQ46 as seed ortholog is 100%.
Bootstrap support for A8J6F4 as seed ortholog is 100%.

Group of orthologs #1298. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 C.reinhardtii:106

C0NSR8              	100.00%		A8J6H6              	100.00%
Bootstrap support for C0NSR8 as seed ortholog is 100%.
Bootstrap support for A8J6H6 as seed ortholog is 100%.

Group of orthologs #1299. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 C.reinhardtii:106

C0NUR9              	100.00%		A8J5M9              	100.00%
Bootstrap support for C0NUR9 as seed ortholog is 100%.
Bootstrap support for A8J5M9 as seed ortholog is 100%.

Group of orthologs #1300. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:22 C.reinhardtii:21

C0NCT3              	100.00%		A8J3F8              	100.00%
C0NUH0              	6.92%		
Bootstrap support for C0NCT3 as seed ortholog is 71%.
Alternative seed ortholog is C0NJX9 (22 bits away from this cluster)
Bootstrap support for A8J3F8 as seed ortholog is 93%.

Group of orthologs #1301. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 C.reinhardtii:105

C0NPG1              	100.00%		A8JGT3              	100.00%
                    	       		A8J6Q1              	13.32%
Bootstrap support for C0NPG1 as seed ortholog is 100%.
Bootstrap support for A8JGT3 as seed ortholog is 100%.

Group of orthologs #1302. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 C.reinhardtii:105

C0NER9              	100.00%		A8HZM0              	100.00%
Bootstrap support for C0NER9 as seed ortholog is 100%.
Bootstrap support for A8HZM0 as seed ortholog is 100%.

Group of orthologs #1303. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 C.reinhardtii:105

C0NGT9              	100.00%		A8HXD3              	100.00%
Bootstrap support for C0NGT9 as seed ortholog is 100%.
Bootstrap support for A8HXD3 as seed ortholog is 100%.

Group of orthologs #1304. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 C.reinhardtii:105

C0NEU7              	100.00%		A8IFM6              	100.00%
Bootstrap support for C0NEU7 as seed ortholog is 100%.
Bootstrap support for A8IFM6 as seed ortholog is 100%.

Group of orthologs #1305. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 C.reinhardtii:105

C0NTM8              	100.00%		A8IU90              	100.00%
Bootstrap support for C0NTM8 as seed ortholog is 100%.
Bootstrap support for A8IU90 as seed ortholog is 100%.

Group of orthologs #1306. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 C.reinhardtii:104

C0NW70              	100.00%		A8J0C2              	100.00%
                    	       		A8I8S8              	73.85%
                    	       		A8HV32              	26.45%
                    	       		A8IZF5              	10.55%
Bootstrap support for C0NW70 as seed ortholog is 100%.
Bootstrap support for A8J0C2 as seed ortholog is 100%.

Group of orthologs #1307. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:40 C.reinhardtii:43

C0NAS6              	100.00%		A8IZS5              	100.00%
Bootstrap support for C0NAS6 as seed ortholog is 96%.
Bootstrap support for A8IZS5 as seed ortholog is 78%.

Group of orthologs #1308. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 C.reinhardtii:104

C0NMT2              	100.00%		A8IA47              	100.00%
Bootstrap support for C0NMT2 as seed ortholog is 100%.
Bootstrap support for A8IA47 as seed ortholog is 100%.

Group of orthologs #1309. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 C.reinhardtii:45

C0NCV9              	100.00%		A8JES1              	100.00%
Bootstrap support for C0NCV9 as seed ortholog is 100%.
Bootstrap support for A8JES1 as seed ortholog is 96%.

Group of orthologs #1310. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 C.reinhardtii:104

C0NMJ3              	100.00%		A8J6H4              	100.00%
Bootstrap support for C0NMJ3 as seed ortholog is 100%.
Bootstrap support for A8J6H4 as seed ortholog is 100%.

Group of orthologs #1311. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 C.reinhardtii:104

C0NPI9              	100.00%		A8J834              	100.00%
Bootstrap support for C0NPI9 as seed ortholog is 100%.
Bootstrap support for A8J834 as seed ortholog is 100%.

Group of orthologs #1312. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 C.reinhardtii:104

C0NY59              	100.00%		A8J266              	100.00%
Bootstrap support for C0NY59 as seed ortholog is 100%.
Bootstrap support for A8J266 as seed ortholog is 100%.

Group of orthologs #1313. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 C.reinhardtii:104

C0NY23              	100.00%		A8JH66              	100.00%
Bootstrap support for C0NY23 as seed ortholog is 100%.
Bootstrap support for A8JH66 as seed ortholog is 100%.

Group of orthologs #1314. Best score 103 bits
Score difference with first non-orthologous sequence - A.capsulata:103 C.reinhardtii:103

C0NFB8              	100.00%		A8JFR7              	100.00%
                    	       		A8J8S2              	15.59%
                    	       		A8HMB1              	8.28%
                    	       		A8JIN0              	6.48%
Bootstrap support for C0NFB8 as seed ortholog is 100%.
Bootstrap support for A8JFR7 as seed ortholog is 100%.

Group of orthologs #1315. Best score 103 bits
Score difference with first non-orthologous sequence - A.capsulata:103 C.reinhardtii:103

C0NNY8              	100.00%		A8HQ78              	100.00%
Bootstrap support for C0NNY8 as seed ortholog is 100%.
Bootstrap support for A8HQ78 as seed ortholog is 100%.

Group of orthologs #1316. Best score 103 bits
Score difference with first non-orthologous sequence - A.capsulata:103 C.reinhardtii:61

C0NBG8              	100.00%		A8J5G1              	100.00%
Bootstrap support for C0NBG8 as seed ortholog is 100%.
Bootstrap support for A8J5G1 as seed ortholog is 99%.

Group of orthologs #1317. Best score 103 bits
Score difference with first non-orthologous sequence - A.capsulata:103 C.reinhardtii:103

C0NBJ7              	100.00%		A8J8P4              	100.00%
Bootstrap support for C0NBJ7 as seed ortholog is 100%.
Bootstrap support for A8J8P4 as seed ortholog is 100%.

Group of orthologs #1318. Best score 103 bits
Score difference with first non-orthologous sequence - A.capsulata:103 C.reinhardtii:103

C0NDC5              	100.00%		A8JHE7              	100.00%
Bootstrap support for C0NDC5 as seed ortholog is 100%.
Bootstrap support for A8JHE7 as seed ortholog is 100%.

Group of orthologs #1319. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:16 C.reinhardtii:102

C0NCL1              	100.00%		A8I1B6              	100.00%
C0NJL3              	9.95%		
Bootstrap support for C0NCL1 as seed ortholog is 71%.
Alternative seed ortholog is C0NS50 (16 bits away from this cluster)
Bootstrap support for A8I1B6 as seed ortholog is 100%.

Group of orthologs #1320. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 C.reinhardtii:102

C0NEQ4              	100.00%		A8HW43              	100.00%
Bootstrap support for C0NEQ4 as seed ortholog is 100%.
Bootstrap support for A8HW43 as seed ortholog is 100%.

Group of orthologs #1321. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 C.reinhardtii:102

C0NBQ0              	100.00%		A8ICX5              	100.00%
Bootstrap support for C0NBQ0 as seed ortholog is 100%.
Bootstrap support for A8ICX5 as seed ortholog is 100%.

Group of orthologs #1322. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 C.reinhardtii:56

C0NCI5              	100.00%		A8IBU6              	100.00%
Bootstrap support for C0NCI5 as seed ortholog is 100%.
Bootstrap support for A8IBU6 as seed ortholog is 98%.

Group of orthologs #1323. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 C.reinhardtii:102

C0NQQ1              	100.00%		A8I609              	100.00%
Bootstrap support for C0NQQ1 as seed ortholog is 100%.
Bootstrap support for A8I609 as seed ortholog is 100%.

Group of orthologs #1324. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:58 C.reinhardtii:102

C0NBB2              	100.00%		A8J275              	100.00%
Bootstrap support for C0NBB2 as seed ortholog is 98%.
Bootstrap support for A8J275 as seed ortholog is 100%.

Group of orthologs #1325. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:37 C.reinhardtii:102

C0NIU5              	100.00%		A8IZP2              	100.00%
Bootstrap support for C0NIU5 as seed ortholog is 91%.
Bootstrap support for A8IZP2 as seed ortholog is 100%.

Group of orthologs #1326. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 C.reinhardtii:102

C0NSG9              	100.00%		A8J2Z8              	100.00%
Bootstrap support for C0NSG9 as seed ortholog is 100%.
Bootstrap support for A8J2Z8 as seed ortholog is 100%.

Group of orthologs #1327. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:60 C.reinhardtii:18

C0NK46              	100.00%		Q944M8              	100.00%
Bootstrap support for C0NK46 as seed ortholog is 99%.
Bootstrap support for Q944M8 as seed ortholog is 84%.

Group of orthologs #1328. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:33 C.reinhardtii:6

C0NLA4              	100.00%		A8J8E9              	100.00%
                    	       		A8JIJ9              	15.97%
                    	       		A8I2Y6              	14.97%
                    	       		A8J3B9              	14.59%
                    	       		A8JC82              	12.20%
                    	       		A8J8X2              	12.08%
                    	       		A8I334              	11.57%
                    	       		A8J7U6              	10.69%
                    	       		A8ITC1              	9.18%
                    	       		A8J3H7              	7.92%
                    	       		A8I336              	7.55%
                    	       		A8ITC0              	7.17%
                    	       		A8ITD4              	5.91%
Bootstrap support for C0NLA4 as seed ortholog is 82%.
Bootstrap support for A8J8E9 as seed ortholog is 64%.
Alternative seed ortholog is A8J118 (6 bits away from this cluster)

Group of orthologs #1329. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:101 C.reinhardtii:101

C0NT17              	100.00%		A8HY27              	100.00%
C0NAK5              	10.42%		
Bootstrap support for C0NT17 as seed ortholog is 100%.
Bootstrap support for A8HY27 as seed ortholog is 100%.

Group of orthologs #1330. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:101 C.reinhardtii:101

C0NY91              	100.00%		A8JF95              	100.00%
Bootstrap support for C0NY91 as seed ortholog is 100%.
Bootstrap support for A8JF95 as seed ortholog is 100%.

Group of orthologs #1331. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:100 C.reinhardtii:100

C0NMN4              	100.00%		A8J0E8              	100.00%
Bootstrap support for C0NMN4 as seed ortholog is 100%.
Bootstrap support for A8J0E8 as seed ortholog is 100%.

Group of orthologs #1332. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:100 C.reinhardtii:100

C0NSY2              	100.00%		A8ITQ1              	100.00%
Bootstrap support for C0NSY2 as seed ortholog is 100%.
Bootstrap support for A8ITQ1 as seed ortholog is 100%.

Group of orthologs #1333. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:33 C.reinhardtii:100

C0NIB8              	100.00%		A8JB38              	100.00%
Bootstrap support for C0NIB8 as seed ortholog is 79%.
Bootstrap support for A8JB38 as seed ortholog is 100%.

Group of orthologs #1334. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:100 C.reinhardtii:100

C0NV36              	100.00%		A8IZC0              	100.00%
Bootstrap support for C0NV36 as seed ortholog is 100%.
Bootstrap support for A8IZC0 as seed ortholog is 100%.

Group of orthologs #1335. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 C.reinhardtii:3

C0NBA3              	100.00%		A8IZT2              	100.00%
C0NUX2              	5.07%		A8JB54              	12.38%
Bootstrap support for C0NBA3 as seed ortholog is 100%.
Bootstrap support for A8IZT2 as seed ortholog is 54%.
Alternative seed ortholog is A8JBN8 (3 bits away from this cluster)

Group of orthologs #1336. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 C.reinhardtii:99

C0NSQ1              	100.00%		A8I0Z1              	100.00%
C0NTY8              	16.44%		
Bootstrap support for C0NSQ1 as seed ortholog is 100%.
Bootstrap support for A8I0Z1 as seed ortholog is 100%.

Group of orthologs #1337. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 C.reinhardtii:99

C0NU53              	100.00%		A8I6D1              	100.00%
Bootstrap support for C0NU53 as seed ortholog is 100%.
Bootstrap support for A8I6D1 as seed ortholog is 100%.

Group of orthologs #1338. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:21 C.reinhardtii:99

C0NEH4              	100.00%		A8JBU3              	100.00%
Bootstrap support for C0NEH4 as seed ortholog is 69%.
Alternative seed ortholog is C0NH41 (21 bits away from this cluster)
Bootstrap support for A8JBU3 as seed ortholog is 100%.

Group of orthologs #1339. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 C.reinhardtii:99

C0P175              	100.00%		A8ICB0              	100.00%
Bootstrap support for C0P175 as seed ortholog is 100%.
Bootstrap support for A8ICB0 as seed ortholog is 100%.

Group of orthologs #1340. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 C.reinhardtii:28

C0NZU0              	100.00%		A8JAW5              	100.00%
Bootstrap support for C0NZU0 as seed ortholog is 100%.
Bootstrap support for A8JAW5 as seed ortholog is 71%.
Alternative seed ortholog is A8JEJ8 (28 bits away from this cluster)

Group of orthologs #1341. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 C.reinhardtii:99

C0NY98              	100.00%		A8JH16              	100.00%
Bootstrap support for C0NY98 as seed ortholog is 100%.
Bootstrap support for A8JH16 as seed ortholog is 100%.

Group of orthologs #1342. Best score 98 bits
Score difference with first non-orthologous sequence - A.capsulata:43 C.reinhardtii:49

C0NR96              	100.00%		A8I5J0              	100.00%
                    	       		A8JHJ0              	28.69%
                    	       		A8J8T0              	21.84%
                    	       		A8JC79              	19.91%
Bootstrap support for C0NR96 as seed ortholog is 87%.
Bootstrap support for A8I5J0 as seed ortholog is 92%.

Group of orthologs #1343. Best score 98 bits
Score difference with first non-orthologous sequence - A.capsulata:32 C.reinhardtii:23

C0NEP4              	100.00%		A8HZN7              	100.00%
Bootstrap support for C0NEP4 as seed ortholog is 72%.
Alternative seed ortholog is C0NAL4 (32 bits away from this cluster)
Bootstrap support for A8HZN7 as seed ortholog is 64%.
Alternative seed ortholog is A8IDS2 (23 bits away from this cluster)

Group of orthologs #1344. Best score 98 bits
Score difference with first non-orthologous sequence - A.capsulata:98 C.reinhardtii:98

C0NUN6              	100.00%		A8IA96              	100.00%
Bootstrap support for C0NUN6 as seed ortholog is 100%.
Bootstrap support for A8IA96 as seed ortholog is 100%.

Group of orthologs #1345. Best score 98 bits
Score difference with first non-orthologous sequence - A.capsulata:98 C.reinhardtii:98

C0P107              	100.00%		A8J2L7              	100.00%
Bootstrap support for C0P107 as seed ortholog is 100%.
Bootstrap support for A8J2L7 as seed ortholog is 100%.

Group of orthologs #1346. Best score 98 bits
Score difference with first non-orthologous sequence - A.capsulata:98 C.reinhardtii:19

C0NY66              	100.00%		A8JFK9              	100.00%
Bootstrap support for C0NY66 as seed ortholog is 100%.
Bootstrap support for A8JFK9 as seed ortholog is 65%.
Alternative seed ortholog is A8HTY0 (19 bits away from this cluster)

Group of orthologs #1347. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:8 C.reinhardtii:97

C0NQC0              	100.00%		A8J942              	100.00%
                    	       		A8JA41              	31.75%
                    	       		A8IS79              	5.98%
Bootstrap support for C0NQC0 as seed ortholog is 41%.
Alternative seed ortholog is C0NPP1 (8 bits away from this cluster)
Bootstrap support for A8J942 as seed ortholog is 100%.

Group of orthologs #1348. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 C.reinhardtii:6

C0NH87              	100.00%		A8IUX2              	100.00%
                    	       		A8JGU0              	10.07%
Bootstrap support for C0NH87 as seed ortholog is 100%.
Bootstrap support for A8IUX2 as seed ortholog is 55%.
Alternative seed ortholog is A8HYR9 (6 bits away from this cluster)

Group of orthologs #1349. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 C.reinhardtii:97

C0NIS0              	100.00%		A8IZX6              	100.00%
                    	       		A8IZX5              	33.42%
Bootstrap support for C0NIS0 as seed ortholog is 100%.
Bootstrap support for A8IZX6 as seed ortholog is 100%.

Group of orthologs #1350. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:43 C.reinhardtii:30

C0NAH5              	100.00%		A8HPM9              	100.00%
Bootstrap support for C0NAH5 as seed ortholog is 82%.
Bootstrap support for A8HPM9 as seed ortholog is 86%.

Group of orthologs #1351. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:19 C.reinhardtii:35

C0NCR0              	100.00%		A8HWG8              	100.00%
Bootstrap support for C0NCR0 as seed ortholog is 66%.
Alternative seed ortholog is C0NLR3 (19 bits away from this cluster)
Bootstrap support for A8HWG8 as seed ortholog is 51%.
Alternative seed ortholog is A8JHG0 (35 bits away from this cluster)

Group of orthologs #1352. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 C.reinhardtii:97

C0NLB4              	100.00%		A8HPS0              	100.00%
Bootstrap support for C0NLB4 as seed ortholog is 100%.
Bootstrap support for A8HPS0 as seed ortholog is 100%.

Group of orthologs #1353. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 C.reinhardtii:97

C0NE01              	100.00%		A8IXS9              	100.00%
Bootstrap support for C0NE01 as seed ortholog is 100%.
Bootstrap support for A8IXS9 as seed ortholog is 100%.

Group of orthologs #1354. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 C.reinhardtii:97

C0NNU5              	100.00%		A8IJ71              	100.00%
Bootstrap support for C0NNU5 as seed ortholog is 100%.
Bootstrap support for A8IJ71 as seed ortholog is 100%.

Group of orthologs #1355. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 C.reinhardtii:44

C0NT54              	100.00%		A8IGG2              	100.00%
Bootstrap support for C0NT54 as seed ortholog is 100%.
Bootstrap support for A8IGG2 as seed ortholog is 92%.

Group of orthologs #1356. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 C.reinhardtii:97

C0NRS2              	100.00%		A8ITQ5              	100.00%
Bootstrap support for C0NRS2 as seed ortholog is 100%.
Bootstrap support for A8ITQ5 as seed ortholog is 100%.

Group of orthologs #1357. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 C.reinhardtii:96

C0NEQ8              	100.00%		A8J4D3              	100.00%
                    	       		A8IYY5              	35.01%
                    	       		A8IZ00              	21.83%
Bootstrap support for C0NEQ8 as seed ortholog is 100%.
Bootstrap support for A8J4D3 as seed ortholog is 100%.

Group of orthologs #1358. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 C.reinhardtii:96

C0NE70              	100.00%		A8HXC5              	100.00%
Bootstrap support for C0NE70 as seed ortholog is 100%.
Bootstrap support for A8HXC5 as seed ortholog is 100%.

Group of orthologs #1359. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 C.reinhardtii:96

C0NSL9              	100.00%		A8HMG5              	100.00%
Bootstrap support for C0NSL9 as seed ortholog is 100%.
Bootstrap support for A8HMG5 as seed ortholog is 100%.

Group of orthologs #1360. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 C.reinhardtii:43

C0NCW4              	100.00%		A8J2F0              	100.00%
Bootstrap support for C0NCW4 as seed ortholog is 100%.
Bootstrap support for A8J2F0 as seed ortholog is 99%.

Group of orthologs #1361. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 C.reinhardtii:96

C0NTB3              	100.00%		A8ICA8              	100.00%
Bootstrap support for C0NTB3 as seed ortholog is 100%.
Bootstrap support for A8ICA8 as seed ortholog is 100%.

Group of orthologs #1362. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 C.reinhardtii:96

C0NGT2              	100.00%		A8J2R2              	100.00%
Bootstrap support for C0NGT2 as seed ortholog is 100%.
Bootstrap support for A8J2R2 as seed ortholog is 100%.

Group of orthologs #1363. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 C.reinhardtii:96

C0NRL8              	100.00%		A8IY13              	100.00%
Bootstrap support for C0NRL8 as seed ortholog is 100%.
Bootstrap support for A8IY13 as seed ortholog is 100%.

Group of orthologs #1364. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 C.reinhardtii:96

C0NY34              	100.00%		A8IK60              	100.00%
Bootstrap support for C0NY34 as seed ortholog is 100%.
Bootstrap support for A8IK60 as seed ortholog is 100%.

Group of orthologs #1365. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 C.reinhardtii:31

C0NZW1              	100.00%		A8J3W4              	100.00%
Bootstrap support for C0NZW1 as seed ortholog is 100%.
Bootstrap support for A8J3W4 as seed ortholog is 95%.

Group of orthologs #1366. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 C.reinhardtii:96

C0NMW8              	100.00%		A8JI10              	100.00%
Bootstrap support for C0NMW8 as seed ortholog is 100%.
Bootstrap support for A8JI10 as seed ortholog is 100%.

Group of orthologs #1367. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:53 C.reinhardtii:46

C0NRF5              	100.00%		A8I1A4              	100.00%
                    	       		A8IQK4              	21.51%
                    	       		A8IWN3              	14.75%
Bootstrap support for C0NRF5 as seed ortholog is 90%.
Bootstrap support for A8I1A4 as seed ortholog is 88%.

Group of orthologs #1368. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:95 C.reinhardtii:95

C0NPR4              	100.00%		A8J762              	100.00%
                    	       		A8J1R8              	42.35%
                    	       		A8J0T5              	38.78%
Bootstrap support for C0NPR4 as seed ortholog is 100%.
Bootstrap support for A8J762 as seed ortholog is 100%.

Group of orthologs #1369. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:95 C.reinhardtii:95

C0NJZ4              	100.00%		A8HTE8              	100.00%
C0NK44              	84.12%		
Bootstrap support for C0NJZ4 as seed ortholog is 100%.
Bootstrap support for A8HTE8 as seed ortholog is 100%.

Group of orthologs #1370. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:3 C.reinhardtii:95

C0NWR6              	100.00%		A8JIG9              	100.00%
                    	       		A8JAD2              	6.79%
Bootstrap support for C0NWR6 as seed ortholog is 53%.
Alternative seed ortholog is C0NQH3 (3 bits away from this cluster)
Bootstrap support for A8JIG9 as seed ortholog is 100%.

Group of orthologs #1371. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:95 C.reinhardtii:95

C0NHE7              	100.00%		A8IT97              	100.00%
Bootstrap support for C0NHE7 as seed ortholog is 100%.
Bootstrap support for A8IT97 as seed ortholog is 100%.

Group of orthologs #1372. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:95 C.reinhardtii:95

C0NG78              	100.00%		A8J1G4              	100.00%
Bootstrap support for C0NG78 as seed ortholog is 100%.
Bootstrap support for A8J1G4 as seed ortholog is 100%.

Group of orthologs #1373. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:95 C.reinhardtii:95

C0NI43              	100.00%		A8J503              	100.00%
Bootstrap support for C0NI43 as seed ortholog is 100%.
Bootstrap support for A8J503 as seed ortholog is 100%.

Group of orthologs #1374. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 C.reinhardtii:94

C0ND06              	100.00%		A8ILK1              	100.00%
                    	       		A8J6U6              	7.02%
Bootstrap support for C0ND06 as seed ortholog is 100%.
Bootstrap support for A8ILK1 as seed ortholog is 100%.

Group of orthologs #1375. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 C.reinhardtii:94

C0NXV1              	100.00%		A8HRZ0              	100.00%
                    	       		Q39576              	42.96%
Bootstrap support for C0NXV1 as seed ortholog is 100%.
Bootstrap support for A8HRZ0 as seed ortholog is 100%.

Group of orthologs #1376. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:49 C.reinhardtii:94

C0NZ77              	100.00%		A8J139              	100.00%
                    	       		A8J5J7              	15.20%
Bootstrap support for C0NZ77 as seed ortholog is 87%.
Bootstrap support for A8J139 as seed ortholog is 100%.

Group of orthologs #1377. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 C.reinhardtii:94

C0NPM9              	100.00%		A8I4Y6              	100.00%
Bootstrap support for C0NPM9 as seed ortholog is 100%.
Bootstrap support for A8I4Y6 as seed ortholog is 100%.

Group of orthologs #1378. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 C.reinhardtii:94

C0NEK3              	100.00%		A8J3V3              	100.00%
Bootstrap support for C0NEK3 as seed ortholog is 100%.
Bootstrap support for A8J3V3 as seed ortholog is 100%.

Group of orthologs #1379. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 C.reinhardtii:94

C0NXR5              	100.00%		A8IIC5              	100.00%
Bootstrap support for C0NXR5 as seed ortholog is 100%.
Bootstrap support for A8IIC5 as seed ortholog is 100%.

Group of orthologs #1380. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:35 C.reinhardtii:42

C0NJ62              	100.00%		A8JGU6              	100.00%
Bootstrap support for C0NJ62 as seed ortholog is 91%.
Bootstrap support for A8JGU6 as seed ortholog is 95%.

Group of orthologs #1381. Best score 93 bits
Score difference with first non-orthologous sequence - A.capsulata:93 C.reinhardtii:93

C0NE62              	100.00%		A8JIF2              	100.00%
                    	       		A8HMA7              	7.95%
Bootstrap support for C0NE62 as seed ortholog is 100%.
Bootstrap support for A8JIF2 as seed ortholog is 100%.

Group of orthologs #1382. Best score 93 bits
Score difference with first non-orthologous sequence - A.capsulata:93 C.reinhardtii:93

C0NAG7              	100.00%		A8I311              	100.00%
Bootstrap support for C0NAG7 as seed ortholog is 100%.
Bootstrap support for A8I311 as seed ortholog is 100%.

Group of orthologs #1383. Best score 93 bits
Score difference with first non-orthologous sequence - A.capsulata:93 C.reinhardtii:93

C0NJ91              	100.00%		A8J213              	100.00%
Bootstrap support for C0NJ91 as seed ortholog is 100%.
Bootstrap support for A8J213 as seed ortholog is 100%.

Group of orthologs #1384. Best score 93 bits
Score difference with first non-orthologous sequence - A.capsulata:93 C.reinhardtii:93

C0NN05              	100.00%		A8J9F7              	100.00%
Bootstrap support for C0NN05 as seed ortholog is 100%.
Bootstrap support for A8J9F7 as seed ortholog is 100%.

Group of orthologs #1385. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 C.reinhardtii:92

C0NEI6              	100.00%		A8HP70              	100.00%
                    	       		A8J3K9              	6.44%
Bootstrap support for C0NEI6 as seed ortholog is 100%.
Bootstrap support for A8HP70 as seed ortholog is 100%.

Group of orthologs #1386. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 C.reinhardtii:92

C0NCH5              	100.00%		A8IZB3              	100.00%
                    	       		A8JFV4              	22.76%
Bootstrap support for C0NCH5 as seed ortholog is 100%.
Bootstrap support for A8IZB3 as seed ortholog is 100%.

Group of orthologs #1387. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 C.reinhardtii:92

C0NKD6              	100.00%		A8J073              	100.00%
Bootstrap support for C0NKD6 as seed ortholog is 100%.
Bootstrap support for A8J073 as seed ortholog is 100%.

Group of orthologs #1388. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 C.reinhardtii:92

C0NKS0              	100.00%		A8JGS1              	100.00%
Bootstrap support for C0NKS0 as seed ortholog is 100%.
Bootstrap support for A8JGS1 as seed ortholog is 100%.

Group of orthologs #1389. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 C.reinhardtii:92

C0NXC5              	100.00%		A8J756              	100.00%
Bootstrap support for C0NXC5 as seed ortholog is 100%.
Bootstrap support for A8J756 as seed ortholog is 100%.

Group of orthologs #1390. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 C.reinhardtii:91

C0NBY7              	100.00%		A8I6I8              	100.00%
C0NS67              	100.00%		
C0NFS8              	20.18%		
C0NW75              	7.24%		
C0NXS6              	6.61%		
Bootstrap support for C0NBY7 as seed ortholog is 100%.
Bootstrap support for C0NS67 as seed ortholog is 100%.
Bootstrap support for A8I6I8 as seed ortholog is 100%.

Group of orthologs #1391. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 C.reinhardtii:91

C0NLT1              	100.00%		A8J8M8              	100.00%
                    	       		A8J8M6              	25.35%
                    	       		A8I8C6              	10.58%
Bootstrap support for C0NLT1 as seed ortholog is 100%.
Bootstrap support for A8J8M8 as seed ortholog is 100%.

Group of orthologs #1392. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 C.reinhardtii:91

C0NC49              	100.00%		A8HZK8              	100.00%
Bootstrap support for C0NC49 as seed ortholog is 100%.
Bootstrap support for A8HZK8 as seed ortholog is 100%.

Group of orthologs #1393. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 C.reinhardtii:91

C0NGV2              	100.00%		A8I6W9              	100.00%
Bootstrap support for C0NGV2 as seed ortholog is 100%.
Bootstrap support for A8I6W9 as seed ortholog is 100%.

Group of orthologs #1394. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 C.reinhardtii:91

C0NC50              	100.00%		A8J329              	100.00%
Bootstrap support for C0NC50 as seed ortholog is 100%.
Bootstrap support for A8J329 as seed ortholog is 100%.

Group of orthologs #1395. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 C.reinhardtii:91

C0NLL5              	100.00%		A8ITZ3              	100.00%
Bootstrap support for C0NLL5 as seed ortholog is 100%.
Bootstrap support for A8ITZ3 as seed ortholog is 100%.

Group of orthologs #1396. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 C.reinhardtii:33

C0NZ15              	100.00%		A8IR04              	100.00%
Bootstrap support for C0NZ15 as seed ortholog is 100%.
Bootstrap support for A8IR04 as seed ortholog is 95%.

Group of orthologs #1397. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 C.reinhardtii:30

C0NK72              	100.00%		A8JB48              	100.00%
Bootstrap support for C0NK72 as seed ortholog is 100%.
Bootstrap support for A8JB48 as seed ortholog is 92%.

Group of orthologs #1398. Best score 90 bits
Score difference with first non-orthologous sequence - A.capsulata:90 C.reinhardtii:90

C0NKH2              	100.00%		A8HSK5              	100.00%
Bootstrap support for C0NKH2 as seed ortholog is 100%.
Bootstrap support for A8HSK5 as seed ortholog is 100%.

Group of orthologs #1399. Best score 90 bits
Score difference with first non-orthologous sequence - A.capsulata:90 C.reinhardtii:90

C0NH23              	100.00%		A8I388              	100.00%
Bootstrap support for C0NH23 as seed ortholog is 100%.
Bootstrap support for A8I388 as seed ortholog is 100%.

Group of orthologs #1400. Best score 90 bits
Score difference with first non-orthologous sequence - A.capsulata:90 C.reinhardtii:6

C0NME8              	100.00%		A8ICK6              	100.00%
Bootstrap support for C0NME8 as seed ortholog is 100%.
Bootstrap support for A8ICK6 as seed ortholog is 63%.
Alternative seed ortholog is A8JG35 (6 bits away from this cluster)

Group of orthologs #1401. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 C.reinhardtii:3

C0NVY0              	100.00%		A8J163              	100.00%
                    	       		A8J165              	22.70%
Bootstrap support for C0NVY0 as seed ortholog is 100%.
Bootstrap support for A8J163 as seed ortholog is 55%.
Alternative seed ortholog is A8IYH3 (3 bits away from this cluster)

Group of orthologs #1402. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:3 C.reinhardtii:5

C0NG16              	100.00%		A8I7D3              	100.00%
Bootstrap support for C0NG16 as seed ortholog is 79%.
Bootstrap support for A8I7D3 as seed ortholog is 88%.

Group of orthologs #1403. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 C.reinhardtii:89

C0NPK7              	100.00%		A8HNA4              	100.00%
Bootstrap support for C0NPK7 as seed ortholog is 100%.
Bootstrap support for A8HNA4 as seed ortholog is 100%.

Group of orthologs #1404. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 C.reinhardtii:89

C0NF29              	100.00%		A8IDS0              	100.00%
Bootstrap support for C0NF29 as seed ortholog is 100%.
Bootstrap support for A8IDS0 as seed ortholog is 100%.

Group of orthologs #1405. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:15 C.reinhardtii:25

C0NCJ1              	100.00%		A8IN50              	100.00%
Bootstrap support for C0NCJ1 as seed ortholog is 71%.
Alternative seed ortholog is C0NQP1 (15 bits away from this cluster)
Bootstrap support for A8IN50 as seed ortholog is 69%.
Alternative seed ortholog is A8IAZ1 (25 bits away from this cluster)

Group of orthologs #1406. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 C.reinhardtii:89

C0NEV3              	100.00%		A8IT26              	100.00%
Bootstrap support for C0NEV3 as seed ortholog is 100%.
Bootstrap support for A8IT26 as seed ortholog is 100%.

Group of orthologs #1407. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:18 C.reinhardtii:89

C0NZP0              	100.00%		A8HP05              	100.00%
Bootstrap support for C0NZP0 as seed ortholog is 64%.
Alternative seed ortholog is C0NWG9 (18 bits away from this cluster)
Bootstrap support for A8HP05 as seed ortholog is 100%.

Group of orthologs #1408. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 C.reinhardtii:89

C0NRR6              	100.00%		A8IRQ1              	100.00%
Bootstrap support for C0NRR6 as seed ortholog is 100%.
Bootstrap support for A8IRQ1 as seed ortholog is 100%.

Group of orthologs #1409. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 C.reinhardtii:89

C0NHP4              	100.00%		A8J7R5              	100.00%
Bootstrap support for C0NHP4 as seed ortholog is 100%.
Bootstrap support for A8J7R5 as seed ortholog is 100%.

Group of orthologs #1410. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 C.reinhardtii:89

C0NR83              	100.00%		A8J8J3              	100.00%
Bootstrap support for C0NR83 as seed ortholog is 100%.
Bootstrap support for A8J8J3 as seed ortholog is 100%.

Group of orthologs #1411. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:88 C.reinhardtii:88

C0NQ80              	100.00%		A8HQP6              	100.00%
Bootstrap support for C0NQ80 as seed ortholog is 100%.
Bootstrap support for A8HQP6 as seed ortholog is 100%.

Group of orthologs #1412. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:88 C.reinhardtii:88

C0NWN5              	100.00%		A8HRP7              	100.00%
Bootstrap support for C0NWN5 as seed ortholog is 100%.
Bootstrap support for A8HRP7 as seed ortholog is 100%.

Group of orthologs #1413. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:88 C.reinhardtii:88

C0NJM1              	100.00%		A8IYY1              	100.00%
Bootstrap support for C0NJM1 as seed ortholog is 100%.
Bootstrap support for A8IYY1 as seed ortholog is 100%.

Group of orthologs #1414. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:88 C.reinhardtii:88

C0NVE8              	100.00%		A8IJT8              	100.00%
Bootstrap support for C0NVE8 as seed ortholog is 100%.
Bootstrap support for A8IJT8 as seed ortholog is 100%.

Group of orthologs #1415. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:88 C.reinhardtii:2

C0NQT8              	100.00%		A8JFH5              	100.00%
Bootstrap support for C0NQT8 as seed ortholog is 100%.
Bootstrap support for A8JFH5 as seed ortholog is 55%.
Alternative seed ortholog is A8I3E4 (2 bits away from this cluster)

Group of orthologs #1416. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:6 C.reinhardtii:87

C0NU44              	100.00%		A8HSH5              	100.00%
                    	       		A8HMQ5              	11.19%
Bootstrap support for C0NU44 as seed ortholog is 60%.
Alternative seed ortholog is C0NII0 (6 bits away from this cluster)
Bootstrap support for A8HSH5 as seed ortholog is 100%.

Group of orthologs #1417. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 C.reinhardtii:87

C0NAN4              	100.00%		A8IYG3              	100.00%
Bootstrap support for C0NAN4 as seed ortholog is 100%.
Bootstrap support for A8IYG3 as seed ortholog is 100%.

Group of orthologs #1418. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 C.reinhardtii:87

C0NN48              	100.00%		A8IS54              	100.00%
Bootstrap support for C0NN48 as seed ortholog is 100%.
Bootstrap support for A8IS54 as seed ortholog is 100%.

Group of orthologs #1419. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 C.reinhardtii:87

C0NHB5              	100.00%		A8J7X6              	100.00%
Bootstrap support for C0NHB5 as seed ortholog is 100%.
Bootstrap support for A8J7X6 as seed ortholog is 100%.

Group of orthologs #1420. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 C.reinhardtii:87

C0NG36              	100.00%		A8J9L3              	100.00%
Bootstrap support for C0NG36 as seed ortholog is 100%.
Bootstrap support for A8J9L3 as seed ortholog is 100%.

Group of orthologs #1421. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 C.reinhardtii:87

C0P177              	100.00%		A8IC48              	100.00%
Bootstrap support for C0P177 as seed ortholog is 100%.
Bootstrap support for A8IC48 as seed ortholog is 100%.

Group of orthologs #1422. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 C.reinhardtii:45

C0NZM7              	100.00%		A8IYS2              	100.00%
Bootstrap support for C0NZM7 as seed ortholog is 100%.
Bootstrap support for A8IYS2 as seed ortholog is 86%.

Group of orthologs #1423. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 C.reinhardtii:87

C0NTV4              	100.00%		A8J8A6              	100.00%
Bootstrap support for C0NTV4 as seed ortholog is 100%.
Bootstrap support for A8J8A6 as seed ortholog is 100%.

Group of orthologs #1424. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 C.reinhardtii:26

C0NM39              	100.00%		P11094              	100.00%
Bootstrap support for C0NM39 as seed ortholog is 100%.
Bootstrap support for P11094 as seed ortholog is 87%.

Group of orthologs #1425. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 C.reinhardtii:7

C0NQV4              	100.00%		A8JH49              	100.00%
Bootstrap support for C0NQV4 as seed ortholog is 100%.
Bootstrap support for A8JH49 as seed ortholog is 62%.
Alternative seed ortholog is A8I3M4 (7 bits away from this cluster)

Group of orthologs #1426. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 C.reinhardtii:86

C0NMI3              	100.00%		A8I2V3              	100.00%
                    	       		A8JIT5              	50.96%
                    	       		Q9FE86              	49.68%
Bootstrap support for C0NMI3 as seed ortholog is 100%.
Bootstrap support for A8I2V3 as seed ortholog is 100%.

Group of orthologs #1427. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 C.reinhardtii:86

C0NSV3              	100.00%		A8JGU4              	100.00%
C0P0X0              	22.38%		A8J530              	23.96%
Bootstrap support for C0NSV3 as seed ortholog is 100%.
Bootstrap support for A8JGU4 as seed ortholog is 100%.

Group of orthologs #1428. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 C.reinhardtii:86

C0NII6              	100.00%		A8J7V2              	100.00%
                    	       		A8J6Q2              	8.43%
Bootstrap support for C0NII6 as seed ortholog is 100%.
Bootstrap support for A8J7V2 as seed ortholog is 100%.

Group of orthologs #1429. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 C.reinhardtii:86

C0NZ16              	100.00%		A8ISJ7              	100.00%
C0NT88              	7.60%		
Bootstrap support for C0NZ16 as seed ortholog is 100%.
Bootstrap support for A8ISJ7 as seed ortholog is 100%.

Group of orthologs #1430. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 C.reinhardtii:86

C0NUJ0              	100.00%		A8HSP6              	100.00%
Bootstrap support for C0NUJ0 as seed ortholog is 100%.
Bootstrap support for A8HSP6 as seed ortholog is 100%.

Group of orthologs #1431. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 C.reinhardtii:86

C0NR54              	100.00%		A8IDS5              	100.00%
Bootstrap support for C0NR54 as seed ortholog is 100%.
Bootstrap support for A8IDS5 as seed ortholog is 100%.

Group of orthologs #1432. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 C.reinhardtii:86

C0NME2              	100.00%		A8IW37              	100.00%
Bootstrap support for C0NME2 as seed ortholog is 100%.
Bootstrap support for A8IW37 as seed ortholog is 100%.

Group of orthologs #1433. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 C.reinhardtii:86

C0NV56              	100.00%		A8IIM0              	100.00%
Bootstrap support for C0NV56 as seed ortholog is 100%.
Bootstrap support for A8IIM0 as seed ortholog is 100%.

Group of orthologs #1434. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 C.reinhardtii:86

C0NGT3              	100.00%		A8JHW7              	100.00%
Bootstrap support for C0NGT3 as seed ortholog is 100%.
Bootstrap support for A8JHW7 as seed ortholog is 100%.

Group of orthologs #1435. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:26 C.reinhardtii:86

C0NU52              	100.00%		A8J7H0              	100.00%
Bootstrap support for C0NU52 as seed ortholog is 89%.
Bootstrap support for A8J7H0 as seed ortholog is 100%.

Group of orthologs #1436. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 C.reinhardtii:86

C0NWP4              	100.00%		A8J538              	100.00%
Bootstrap support for C0NWP4 as seed ortholog is 100%.
Bootstrap support for A8J538 as seed ortholog is 100%.

Group of orthologs #1437. Best score 85 bits
Score difference with first non-orthologous sequence - A.capsulata:85 C.reinhardtii:85

C0NTP0              	100.00%		A8I8Z4              	100.00%
                    	       		A8J987              	10.62%
Bootstrap support for C0NTP0 as seed ortholog is 100%.
Bootstrap support for A8I8Z4 as seed ortholog is 100%.

Group of orthologs #1438. Best score 85 bits
Score difference with first non-orthologous sequence - A.capsulata:85 C.reinhardtii:85

C0NZF4              	100.00%		A8IUP0              	100.00%
Bootstrap support for C0NZF4 as seed ortholog is 100%.
Bootstrap support for A8IUP0 as seed ortholog is 100%.

Group of orthologs #1439. Best score 85 bits
Score difference with first non-orthologous sequence - A.capsulata:85 C.reinhardtii:85

C0NRP9              	100.00%		A8JCS9              	100.00%
Bootstrap support for C0NRP9 as seed ortholog is 100%.
Bootstrap support for A8JCS9 as seed ortholog is 100%.

Group of orthologs #1440. Best score 85 bits
Score difference with first non-orthologous sequence - A.capsulata:85 C.reinhardtii:85

C0NRH6              	100.00%		A8JF66              	100.00%
Bootstrap support for C0NRH6 as seed ortholog is 100%.
Bootstrap support for A8JF66 as seed ortholog is 100%.

Group of orthologs #1441. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 C.reinhardtii:84

C0NED4              	100.00%		A8I9T9              	100.00%
                    	       		A8I9U1              	73.14%
                    	       		A8J400              	36.00%
Bootstrap support for C0NED4 as seed ortholog is 100%.
Bootstrap support for A8I9T9 as seed ortholog is 100%.

Group of orthologs #1442. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:15 C.reinhardtii:84

C0NYV2              	100.00%		A8HUN2              	100.00%
                    	       		A8JDG6              	5.38%
Bootstrap support for C0NYV2 as seed ortholog is 78%.
Bootstrap support for A8HUN2 as seed ortholog is 100%.

Group of orthologs #1443. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:34 C.reinhardtii:84

C0NS08              	100.00%		A8JGB5              	100.00%
C0NNB8              	11.09%		
Bootstrap support for C0NS08 as seed ortholog is 82%.
Bootstrap support for A8JGB5 as seed ortholog is 100%.

Group of orthologs #1444. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:15 C.reinhardtii:84

C0NPD7              	100.00%		Q5VLJ9              	100.00%
                    	       		A8IR22              	9.20%
Bootstrap support for C0NPD7 as seed ortholog is 68%.
Alternative seed ortholog is C0NYI7 (15 bits away from this cluster)
Bootstrap support for Q5VLJ9 as seed ortholog is 100%.

Group of orthologs #1445. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 C.reinhardtii:84

C0NGS2              	100.00%		A8IJG5              	100.00%
Bootstrap support for C0NGS2 as seed ortholog is 100%.
Bootstrap support for A8IJG5 as seed ortholog is 100%.

Group of orthologs #1446. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 C.reinhardtii:84

C0NBD0              	100.00%		A8IXG3              	100.00%
Bootstrap support for C0NBD0 as seed ortholog is 100%.
Bootstrap support for A8IXG3 as seed ortholog is 100%.

Group of orthologs #1447. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 C.reinhardtii:84

C0NFJ5              	100.00%		A8IU30              	100.00%
Bootstrap support for C0NFJ5 as seed ortholog is 100%.
Bootstrap support for A8IU30 as seed ortholog is 100%.

Group of orthologs #1448. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:23 C.reinhardtii:38

C0NBP8              	100.00%		A8J0N9              	100.00%
Bootstrap support for C0NBP8 as seed ortholog is 84%.
Bootstrap support for A8J0N9 as seed ortholog is 85%.

Group of orthologs #1449. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 C.reinhardtii:84

C0NNP9              	100.00%		A8IDD8              	100.00%
Bootstrap support for C0NNP9 as seed ortholog is 100%.
Bootstrap support for A8IDD8 as seed ortholog is 100%.

Group of orthologs #1450. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 C.reinhardtii:84

C0NL32              	100.00%		A8ITP7              	100.00%
Bootstrap support for C0NL32 as seed ortholog is 100%.
Bootstrap support for A8ITP7 as seed ortholog is 100%.

Group of orthologs #1451. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 C.reinhardtii:84

C0NCJ5              	100.00%		A8JIE5              	100.00%
Bootstrap support for C0NCJ5 as seed ortholog is 100%.
Bootstrap support for A8JIE5 as seed ortholog is 100%.

Group of orthologs #1452. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 C.reinhardtii:84

C0NAI1              	100.00%		Q8GUQ9              	100.00%
Bootstrap support for C0NAI1 as seed ortholog is 100%.
Bootstrap support for Q8GUQ9 as seed ortholog is 100%.

Group of orthologs #1453. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 C.reinhardtii:84

C0NFE6              	100.00%		Q84U22              	100.00%
Bootstrap support for C0NFE6 as seed ortholog is 100%.
Bootstrap support for Q84U22 as seed ortholog is 100%.

Group of orthologs #1454. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 C.reinhardtii:23

C0NL22              	100.00%		A8JCC0              	100.00%
C0NHA2              	8.96%		A8J0X1              	36.97%
                    	       		A8I9Y9              	21.82%
                    	       		A8JCC1              	20.61%
Bootstrap support for C0NL22 as seed ortholog is 100%.
Bootstrap support for A8JCC0 as seed ortholog is 83%.

Group of orthologs #1455. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 C.reinhardtii:83

C0NBW7              	100.00%		A8HY41              	100.00%
                    	       		A8HXX4              	12.92%
Bootstrap support for C0NBW7 as seed ortholog is 100%.
Bootstrap support for A8HY41 as seed ortholog is 100%.

Group of orthologs #1456. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 C.reinhardtii:83

C0NKZ4              	100.00%		A8HX68              	100.00%
C0NIQ6              	8.72%		
Bootstrap support for C0NKZ4 as seed ortholog is 100%.
Bootstrap support for A8HX68 as seed ortholog is 100%.

Group of orthologs #1457. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 C.reinhardtii:83

C0NAD5              	100.00%		A8INC7              	100.00%
Bootstrap support for C0NAD5 as seed ortholog is 100%.
Bootstrap support for A8INC7 as seed ortholog is 100%.

Group of orthologs #1458. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 C.reinhardtii:83

C0NFI1              	100.00%		A8INV6              	100.00%
Bootstrap support for C0NFI1 as seed ortholog is 100%.
Bootstrap support for A8INV6 as seed ortholog is 100%.

Group of orthologs #1459. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 C.reinhardtii:83

C0NGZ0              	100.00%		A8IR64              	100.00%
Bootstrap support for C0NGZ0 as seed ortholog is 100%.
Bootstrap support for A8IR64 as seed ortholog is 100%.

Group of orthologs #1460. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 C.reinhardtii:83

C0NCH6              	100.00%		A8J211              	100.00%
Bootstrap support for C0NCH6 as seed ortholog is 100%.
Bootstrap support for A8J211 as seed ortholog is 100%.

Group of orthologs #1461. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 C.reinhardtii:83

C0P0S5              	100.00%		A8HN52              	100.00%
Bootstrap support for C0P0S5 as seed ortholog is 100%.
Bootstrap support for A8HN52 as seed ortholog is 100%.

Group of orthologs #1462. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:6 C.reinhardtii:28

C0NQN1              	100.00%		A8IVY1              	100.00%
Bootstrap support for C0NQN1 as seed ortholog is 64%.
Alternative seed ortholog is C0NZ40 (6 bits away from this cluster)
Bootstrap support for A8IVY1 as seed ortholog is 42%.
Alternative seed ortholog is A8JDQ0 (28 bits away from this cluster)

Group of orthologs #1463. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 C.reinhardtii:83

C0NKY6              	100.00%		A8J3E1              	100.00%
Bootstrap support for C0NKY6 as seed ortholog is 100%.
Bootstrap support for A8J3E1 as seed ortholog is 100%.

Group of orthologs #1464. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 C.reinhardtii:83

C0NZU6              	100.00%		A8IV58              	100.00%
Bootstrap support for C0NZU6 as seed ortholog is 100%.
Bootstrap support for A8IV58 as seed ortholog is 100%.

Group of orthologs #1465. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 C.reinhardtii:83

C0NGG1              	100.00%		Q6UKY4              	100.00%
Bootstrap support for C0NGG1 as seed ortholog is 100%.
Bootstrap support for Q6UKY4 as seed ortholog is 100%.

Group of orthologs #1466. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 C.reinhardtii:82

C0NXN8              	100.00%		A8HQ80              	100.00%
                    	       		A8J7N6              	5.79%
Bootstrap support for C0NXN8 as seed ortholog is 100%.
Bootstrap support for A8HQ80 as seed ortholog is 100%.

Group of orthologs #1467. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 C.reinhardtii:36

C0NG47              	100.00%		A8HRS8              	100.00%
Bootstrap support for C0NG47 as seed ortholog is 100%.
Bootstrap support for A8HRS8 as seed ortholog is 98%.

Group of orthologs #1468. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 C.reinhardtii:82

C0NRZ0              	100.00%		A8HUN7              	100.00%
Bootstrap support for C0NRZ0 as seed ortholog is 100%.
Bootstrap support for A8HUN7 as seed ortholog is 100%.

Group of orthologs #1469. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:30 C.reinhardtii:24

C0NJ85              	100.00%		A8IR23              	100.00%
Bootstrap support for C0NJ85 as seed ortholog is 85%.
Bootstrap support for A8IR23 as seed ortholog is 85%.

Group of orthologs #1470. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 C.reinhardtii:82

C0NR69              	100.00%		A8I762              	100.00%
Bootstrap support for C0NR69 as seed ortholog is 100%.
Bootstrap support for A8I762 as seed ortholog is 100%.

Group of orthologs #1471. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 C.reinhardtii:23

C0NMQ7              	100.00%		A8IKM0              	100.00%
Bootstrap support for C0NMQ7 as seed ortholog is 100%.
Bootstrap support for A8IKM0 as seed ortholog is 79%.

Group of orthologs #1472. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 C.reinhardtii:82

C0NW82              	100.00%		A8HZJ8              	100.00%
Bootstrap support for C0NW82 as seed ortholog is 100%.
Bootstrap support for A8HZJ8 as seed ortholog is 100%.

Group of orthologs #1473. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 C.reinhardtii:82

C0NUB9              	100.00%		A8IV17              	100.00%
Bootstrap support for C0NUB9 as seed ortholog is 100%.
Bootstrap support for A8IV17 as seed ortholog is 100%.

Group of orthologs #1474. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 C.reinhardtii:81

C0NPE8              	100.00%		A8J7U2              	100.00%
                    	       		A8J7U3              	46.06%
                    	       		A8IX72              	41.91%
Bootstrap support for C0NPE8 as seed ortholog is 100%.
Bootstrap support for A8J7U2 as seed ortholog is 100%.

Group of orthologs #1475. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 C.reinhardtii:18

C0NKA5              	100.00%		A8J3A8              	100.00%
                    	       		A8J3A7              	53.98%
Bootstrap support for C0NKA5 as seed ortholog is 100%.
Bootstrap support for A8J3A8 as seed ortholog is 88%.

Group of orthologs #1476. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 C.reinhardtii:81

C0P198              	100.00%		A8IHE7              	100.00%
C0NK82              	5.58%		
Bootstrap support for C0P198 as seed ortholog is 100%.
Bootstrap support for A8IHE7 as seed ortholog is 100%.

Group of orthologs #1477. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:10 C.reinhardtii:35

C0NIW7              	100.00%		A8I6C7              	100.00%
Bootstrap support for C0NIW7 as seed ortholog is 65%.
Alternative seed ortholog is C0NKF1 (10 bits away from this cluster)
Bootstrap support for A8I6C7 as seed ortholog is 90%.

Group of orthologs #1478. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 C.reinhardtii:81

C0NBP1              	100.00%		A8ITN6              	100.00%
Bootstrap support for C0NBP1 as seed ortholog is 100%.
Bootstrap support for A8ITN6 as seed ortholog is 100%.

Group of orthologs #1479. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 C.reinhardtii:81

C0NG74              	100.00%		A8IIY3              	100.00%
Bootstrap support for C0NG74 as seed ortholog is 100%.
Bootstrap support for A8IIY3 as seed ortholog is 100%.

Group of orthologs #1480. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 C.reinhardtii:81

C0NUE4              	100.00%		A8HVZ9              	100.00%
Bootstrap support for C0NUE4 as seed ortholog is 100%.
Bootstrap support for A8HVZ9 as seed ortholog is 100%.

Group of orthologs #1481. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 C.reinhardtii:4

C0NNX5              	100.00%		A8IYP5              	100.00%
Bootstrap support for C0NNX5 as seed ortholog is 100%.
Bootstrap support for A8IYP5 as seed ortholog is 56%.
Alternative seed ortholog is A8HP58 (4 bits away from this cluster)

Group of orthologs #1482. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 C.reinhardtii:81

C0NN78              	100.00%		A8JHX7              	100.00%
Bootstrap support for C0NN78 as seed ortholog is 100%.
Bootstrap support for A8JHX7 as seed ortholog is 100%.

Group of orthologs #1483. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:33 C.reinhardtii:80

C0NHW8              	100.00%		A8J3U6              	100.00%
                    	       		A8J3U5              	82.31%
                    	       		A8J3T2              	12.93%
Bootstrap support for C0NHW8 as seed ortholog is 84%.
Bootstrap support for A8J3U6 as seed ortholog is 100%.

Group of orthologs #1484. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 C.reinhardtii:80

Q5RLY7              	100.00%		A8IE68              	100.00%
                    	       		A8IFN7              	18.63%
Bootstrap support for Q5RLY7 as seed ortholog is 100%.
Bootstrap support for A8IE68 as seed ortholog is 100%.

Group of orthologs #1485. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 C.reinhardtii:80

C0NJ66              	100.00%		A8IIF1              	100.00%
Bootstrap support for C0NJ66 as seed ortholog is 100%.
Bootstrap support for A8IIF1 as seed ortholog is 100%.

Group of orthologs #1486. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 C.reinhardtii:80

C0NXM7              	100.00%		A8HM66              	100.00%
Bootstrap support for C0NXM7 as seed ortholog is 100%.
Bootstrap support for A8HM66 as seed ortholog is 100%.

Group of orthologs #1487. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 C.reinhardtii:80

C0NWN9              	100.00%		A8HV34              	100.00%
Bootstrap support for C0NWN9 as seed ortholog is 100%.
Bootstrap support for A8HV34 as seed ortholog is 100%.

Group of orthologs #1488. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 C.reinhardtii:80

C0NQ03              	100.00%		A8IR25              	100.00%
Bootstrap support for C0NQ03 as seed ortholog is 100%.
Bootstrap support for A8IR25 as seed ortholog is 100%.

Group of orthologs #1489. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 C.reinhardtii:80

C0P132              	100.00%		A8I8Z1              	100.00%
Bootstrap support for C0P132 as seed ortholog is 100%.
Bootstrap support for A8I8Z1 as seed ortholog is 100%.

Group of orthologs #1490. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 C.reinhardtii:80

C0NGX0              	100.00%		A8JAC2              	100.00%
Bootstrap support for C0NGX0 as seed ortholog is 100%.
Bootstrap support for A8JAC2 as seed ortholog is 100%.

Group of orthologs #1491. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 C.reinhardtii:80

C0NYE8              	100.00%		A8JDW7              	100.00%
Bootstrap support for C0NYE8 as seed ortholog is 100%.
Bootstrap support for A8JDW7 as seed ortholog is 100%.

Group of orthologs #1492. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 C.reinhardtii:37

C0NRS9              	100.00%		A8J7X1              	100.00%
C0NL92              	24.34%		A8IM09              	19.15%
Bootstrap support for C0NRS9 as seed ortholog is 100%.
Bootstrap support for A8J7X1 as seed ortholog is 82%.

Group of orthologs #1493. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 C.reinhardtii:79

C0NV46              	100.00%		A8ILK6              	100.00%
                    	       		A8ILM9              	29.74%
Bootstrap support for C0NV46 as seed ortholog is 100%.
Bootstrap support for A8ILK6 as seed ortholog is 100%.

Group of orthologs #1494. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 C.reinhardtii:79

C0ND36              	100.00%		A8HMG8              	100.00%
Bootstrap support for C0ND36 as seed ortholog is 100%.
Bootstrap support for A8HMG8 as seed ortholog is 100%.

Group of orthologs #1495. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 C.reinhardtii:79

C0NFZ3              	100.00%		A8HXX1              	100.00%
Bootstrap support for C0NFZ3 as seed ortholog is 100%.
Bootstrap support for A8HXX1 as seed ortholog is 100%.

Group of orthologs #1496. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 C.reinhardtii:79

C0NN88              	100.00%		A8HUH8              	100.00%
Bootstrap support for C0NN88 as seed ortholog is 100%.
Bootstrap support for A8HUH8 as seed ortholog is 100%.

Group of orthologs #1497. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 C.reinhardtii:79

C0NRS8              	100.00%		A8I9Z4              	100.00%
Bootstrap support for C0NRS8 as seed ortholog is 100%.
Bootstrap support for A8I9Z4 as seed ortholog is 100%.

Group of orthologs #1498. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 C.reinhardtii:15

C0ND07              	100.00%		A8J3U9              	100.00%
Bootstrap support for C0ND07 as seed ortholog is 100%.
Bootstrap support for A8J3U9 as seed ortholog is 67%.
Alternative seed ortholog is A8JF15 (15 bits away from this cluster)

Group of orthologs #1499. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 C.reinhardtii:79

C0NQ37              	100.00%		A8IVT5              	100.00%
Bootstrap support for C0NQ37 as seed ortholog is 100%.
Bootstrap support for A8IVT5 as seed ortholog is 100%.

Group of orthologs #1500. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:24 C.reinhardtii:22

C0NS13              	100.00%		A8J8L3              	100.00%
Bootstrap support for C0NS13 as seed ortholog is 86%.
Bootstrap support for A8J8L3 as seed ortholog is 85%.

Group of orthologs #1501. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 C.reinhardtii:78

C0NVP9              	100.00%		A8IQI1              	100.00%
C0NVP2              	100.00%		A8IQ53              	100.00%
                    	       		A8IQ56              	100.00%
                    	       		A8IQG4              	100.00%
                    	       		A8IQH3              	91.37%
Bootstrap support for C0NVP9 as seed ortholog is 100%.
Bootstrap support for C0NVP2 as seed ortholog is 100%.
Bootstrap support for A8IQI1 as seed ortholog is 100%.
Bootstrap support for A8IQ53 as seed ortholog is 100%.
Bootstrap support for A8IQ56 as seed ortholog is 100%.
Bootstrap support for A8IQG4 as seed ortholog is 100%.

Group of orthologs #1502. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 C.reinhardtii:78

C0NTE6              	100.00%		Q8S4W5              	100.00%
                    	       		A8JFM0              	9.75%
Bootstrap support for C0NTE6 as seed ortholog is 100%.
Bootstrap support for Q8S4W5 as seed ortholog is 100%.

Group of orthologs #1503. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 C.reinhardtii:78

C0NGN1              	100.00%		A8ICD3              	100.00%
Bootstrap support for C0NGN1 as seed ortholog is 100%.
Bootstrap support for A8ICD3 as seed ortholog is 100%.

Group of orthologs #1504. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 C.reinhardtii:78

C0NGZ1              	100.00%		A8ICD8              	100.00%
Bootstrap support for C0NGZ1 as seed ortholog is 100%.
Bootstrap support for A8ICD8 as seed ortholog is 100%.

Group of orthologs #1505. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 C.reinhardtii:78

C0NVE7              	100.00%		A8HWZ6              	100.00%
Bootstrap support for C0NVE7 as seed ortholog is 100%.
Bootstrap support for A8HWZ6 as seed ortholog is 100%.

Group of orthologs #1506. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 C.reinhardtii:78

C0NVQ0              	100.00%		A8J082              	100.00%
Bootstrap support for C0NVQ0 as seed ortholog is 100%.
Bootstrap support for A8J082 as seed ortholog is 100%.

Group of orthologs #1507. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 C.reinhardtii:78

C0NZW5              	100.00%		A8JHU3              	100.00%
Bootstrap support for C0NZW5 as seed ortholog is 100%.
Bootstrap support for A8JHU3 as seed ortholog is 100%.

Group of orthologs #1508. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 C.reinhardtii:77

C0NHX7              	100.00%		A8ISD8              	100.00%
Bootstrap support for C0NHX7 as seed ortholog is 100%.
Bootstrap support for A8ISD8 as seed ortholog is 100%.

Group of orthologs #1509. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 C.reinhardtii:77

C0NM38              	100.00%		A8IJY1              	100.00%
Bootstrap support for C0NM38 as seed ortholog is 100%.
Bootstrap support for A8IJY1 as seed ortholog is 100%.

Group of orthologs #1510. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 C.reinhardtii:10

C0NJB2              	100.00%		A8IS66              	100.00%
Bootstrap support for C0NJB2 as seed ortholog is 100%.
Bootstrap support for A8IS66 as seed ortholog is 69%.
Alternative seed ortholog is A8JBY1 (10 bits away from this cluster)

Group of orthologs #1511. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 C.reinhardtii:77

C0NIR1              	100.00%		A8IWT7              	100.00%
Bootstrap support for C0NIR1 as seed ortholog is 100%.
Bootstrap support for A8IWT7 as seed ortholog is 100%.

Group of orthologs #1512. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 C.reinhardtii:10

C0NEF1              	100.00%		A8J5M7              	100.00%
Bootstrap support for C0NEF1 as seed ortholog is 100%.
Bootstrap support for A8J5M7 as seed ortholog is 41%.
Alternative seed ortholog is A8IJM8 (10 bits away from this cluster)

Group of orthologs #1513. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 C.reinhardtii:34

C0NFE8              	100.00%		A8JA11              	100.00%
Bootstrap support for C0NFE8 as seed ortholog is 100%.
Bootstrap support for A8JA11 as seed ortholog is 89%.

Group of orthologs #1514. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 C.reinhardtii:76

C0NZ33              	100.00%		A8J863              	100.00%
                    	       		A8J861              	45.72%
                    	       		A8I8K6              	39.99%
                    	       		A8IT77              	27.92%
                    	       		A8I8K3              	26.21%
                    	       		A8IT91              	24.72%
                    	       		A8IB37              	20.18%
                    	       		A8IB85              	18.47%
                    	       		A8IT92              	17.42%
                    	       		A8JFK7              	16.31%
                    	       		A8IBH3              	15.19%
                    	       		A8ISJ6              	14.45%
                    	       		Q9ATG5              	14.15%
                    	       		A8IHH1              	14.00%
                    	       		A8I963              	12.43%
                    	       		A8HPB6              	11.84%
                    	       		A8HPB7              	11.84%
Bootstrap support for C0NZ33 as seed ortholog is 100%.
Bootstrap support for A8J863 as seed ortholog is 100%.

Group of orthologs #1515. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 C.reinhardtii:31

C0NTD3              	100.00%		A8JHH4              	100.00%
                    	       		A8JHH3              	40.44%
Bootstrap support for C0NTD3 as seed ortholog is 100%.
Bootstrap support for A8JHH4 as seed ortholog is 74%.
Alternative seed ortholog is A8JAF1 (31 bits away from this cluster)

Group of orthologs #1516. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 C.reinhardtii:76

C0NH21              	100.00%		A8HW82              	100.00%
Bootstrap support for C0NH21 as seed ortholog is 100%.
Bootstrap support for A8HW82 as seed ortholog is 100%.

Group of orthologs #1517. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 C.reinhardtii:76

C0NAV3              	100.00%		A8IXQ8              	100.00%
Bootstrap support for C0NAV3 as seed ortholog is 100%.
Bootstrap support for A8IXQ8 as seed ortholog is 100%.

Group of orthologs #1518. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 C.reinhardtii:76

C0NH62              	100.00%		A8IW57              	100.00%
Bootstrap support for C0NH62 as seed ortholog is 100%.
Bootstrap support for A8IW57 as seed ortholog is 100%.

Group of orthologs #1519. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 C.reinhardtii:76

C0NY04              	100.00%		A8J4G2              	100.00%
Bootstrap support for C0NY04 as seed ortholog is 100%.
Bootstrap support for A8J4G2 as seed ortholog is 100%.

Group of orthologs #1520. Best score 75 bits
Score difference with first non-orthologous sequence - A.capsulata:75 C.reinhardtii:16

C0NK83              	100.00%		A8J935              	100.00%
Bootstrap support for C0NK83 as seed ortholog is 100%.
Bootstrap support for A8J935 as seed ortholog is 59%.
Alternative seed ortholog is A8JHR5 (16 bits away from this cluster)

Group of orthologs #1521. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:22 C.reinhardtii:74

C0NBN2              	100.00%		A8IC26              	100.00%
C0NTC3              	20.77%		A8IC13              	46.01%
C0NPB6              	18.21%		A8IBZ2              	45.39%
C0NT71              	11.93%		A8IC21              	44.56%
C0NWR1              	10.76%		A8IC18              	44.04%
C0NCB7              	9.16%		A8JFE7              	20.31%
Bootstrap support for C0NBN2 as seed ortholog is 50%.
Alternative seed ortholog is C0NKK1 (22 bits away from this cluster)
Bootstrap support for A8IC26 as seed ortholog is 100%.

Group of orthologs #1522. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 C.reinhardtii:74

C0NHI8              	100.00%		A8I282              	100.00%
Bootstrap support for C0NHI8 as seed ortholog is 100%.
Bootstrap support for A8I282 as seed ortholog is 100%.

Group of orthologs #1523. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 C.reinhardtii:74

C0NAV0              	100.00%		A8IR87              	100.00%
Bootstrap support for C0NAV0 as seed ortholog is 100%.
Bootstrap support for A8IR87 as seed ortholog is 100%.

Group of orthologs #1524. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 C.reinhardtii:74

C0NIL8              	100.00%		A8I826              	100.00%
Bootstrap support for C0NIL8 as seed ortholog is 100%.
Bootstrap support for A8I826 as seed ortholog is 100%.

Group of orthologs #1525. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 C.reinhardtii:74

C0NP05              	100.00%		A8I4L4              	100.00%
Bootstrap support for C0NP05 as seed ortholog is 100%.
Bootstrap support for A8I4L4 as seed ortholog is 100%.

Group of orthologs #1526. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 C.reinhardtii:74

C0NEA4              	100.00%		A8J173              	100.00%
Bootstrap support for C0NEA4 as seed ortholog is 100%.
Bootstrap support for A8J173 as seed ortholog is 100%.

Group of orthologs #1527. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 C.reinhardtii:74

C0NAA3              	100.00%		A8JB67              	100.00%
Bootstrap support for C0NAA3 as seed ortholog is 100%.
Bootstrap support for A8JB67 as seed ortholog is 100%.

Group of orthologs #1528. Best score 73 bits
Score difference with first non-orthologous sequence - A.capsulata:2 C.reinhardtii:73

C0NIT2              	100.00%		A8HUY7              	100.00%
Bootstrap support for C0NIT2 as seed ortholog is 74%.
Alternative seed ortholog is C0NVY4 (2 bits away from this cluster)
Bootstrap support for A8HUY7 as seed ortholog is 100%.

Group of orthologs #1529. Best score 73 bits
Score difference with first non-orthologous sequence - A.capsulata:73 C.reinhardtii:28

C0NZY7              	100.00%		A8HQ36              	100.00%
Bootstrap support for C0NZY7 as seed ortholog is 100%.
Bootstrap support for A8HQ36 as seed ortholog is 87%.

Group of orthologs #1530. Best score 73 bits
Score difference with first non-orthologous sequence - A.capsulata:73 C.reinhardtii:73

C0NY60              	100.00%		A8IXU1              	100.00%
Bootstrap support for C0NY60 as seed ortholog is 100%.
Bootstrap support for A8IXU1 as seed ortholog is 100%.

Group of orthologs #1531. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:29 C.reinhardtii:72

C0NZN1              	100.00%		A8I2F3              	100.00%
                    	       		A8I2D5              	27.82%
                    	       		A8I879              	12.84%
Bootstrap support for C0NZN1 as seed ortholog is 89%.
Bootstrap support for A8I2F3 as seed ortholog is 100%.

Group of orthologs #1532. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:72 C.reinhardtii:72

C0NMY8              	100.00%		A8ICE1              	100.00%
Bootstrap support for C0NMY8 as seed ortholog is 100%.
Bootstrap support for A8ICE1 as seed ortholog is 100%.

Group of orthologs #1533. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:72 C.reinhardtii:72

C0NBH3              	100.00%		A8JCT0              	100.00%
Bootstrap support for C0NBH3 as seed ortholog is 100%.
Bootstrap support for A8JCT0 as seed ortholog is 100%.

Group of orthologs #1534. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:72 C.reinhardtii:72

C0NL75              	100.00%		A8JF64              	100.00%
Bootstrap support for C0NL75 as seed ortholog is 100%.
Bootstrap support for A8JF64 as seed ortholog is 100%.

Group of orthologs #1535. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:72 C.reinhardtii:72

C0NQU9              	100.00%		A8JH11              	100.00%
Bootstrap support for C0NQU9 as seed ortholog is 100%.
Bootstrap support for A8JH11 as seed ortholog is 100%.

Group of orthologs #1536. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:72 C.reinhardtii:72

C0NWW1              	100.00%		A8JCQ0              	100.00%
Bootstrap support for C0NWW1 as seed ortholog is 100%.
Bootstrap support for A8JCQ0 as seed ortholog is 100%.

Group of orthologs #1537. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 C.reinhardtii:71

C0NIS4              	100.00%		A8HQ73              	100.00%
                    	       		A8HNI9              	22.15%
Bootstrap support for C0NIS4 as seed ortholog is 100%.
Bootstrap support for A8HQ73 as seed ortholog is 100%.

Group of orthologs #1538. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 C.reinhardtii:71

C0NAS4              	100.00%		A8HZZ8              	100.00%
Bootstrap support for C0NAS4 as seed ortholog is 100%.
Bootstrap support for A8HZZ8 as seed ortholog is 100%.

Group of orthologs #1539. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 C.reinhardtii:71

C0NLK1              	100.00%		A8HQS2              	100.00%
Bootstrap support for C0NLK1 as seed ortholog is 100%.
Bootstrap support for A8HQS2 as seed ortholog is 100%.

Group of orthologs #1540. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 C.reinhardtii:71

C0NSR2              	100.00%		A8HWK8              	100.00%
Bootstrap support for C0NSR2 as seed ortholog is 100%.
Bootstrap support for A8HWK8 as seed ortholog is 100%.

Group of orthologs #1541. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 C.reinhardtii:71

C0NEQ7              	100.00%		A8IUW8              	100.00%
Bootstrap support for C0NEQ7 as seed ortholog is 100%.
Bootstrap support for A8IUW8 as seed ortholog is 100%.

Group of orthologs #1542. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 C.reinhardtii:71

C0NSH2              	100.00%		A8I408              	100.00%
Bootstrap support for C0NSH2 as seed ortholog is 100%.
Bootstrap support for A8I408 as seed ortholog is 100%.

Group of orthologs #1543. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 C.reinhardtii:71

C0NFR0              	100.00%		A8J7J8              	100.00%
Bootstrap support for C0NFR0 as seed ortholog is 100%.
Bootstrap support for A8J7J8 as seed ortholog is 100%.

Group of orthologs #1544. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 C.reinhardtii:71

C0NIE5              	100.00%		A8J5M5              	100.00%
Bootstrap support for C0NIE5 as seed ortholog is 100%.
Bootstrap support for A8J5M5 as seed ortholog is 100%.

Group of orthologs #1545. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 C.reinhardtii:71

C0NWM0              	100.00%		A8JB96              	100.00%
Bootstrap support for C0NWM0 as seed ortholog is 100%.
Bootstrap support for A8JB96 as seed ortholog is 100%.

Group of orthologs #1546. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 C.reinhardtii:71

C0NYG8              	100.00%		A8JF96              	100.00%
Bootstrap support for C0NYG8 as seed ortholog is 100%.
Bootstrap support for A8JF96 as seed ortholog is 100%.

Group of orthologs #1547. Best score 70 bits
Score difference with first non-orthologous sequence - A.capsulata:70 C.reinhardtii:70

C0NBH4              	100.00%		A8HQJ0              	100.00%
Bootstrap support for C0NBH4 as seed ortholog is 100%.
Bootstrap support for A8HQJ0 as seed ortholog is 100%.

Group of orthologs #1548. Best score 70 bits
Score difference with first non-orthologous sequence - A.capsulata:70 C.reinhardtii:70

C0NCQ9              	100.00%		A8HYA5              	100.00%
Bootstrap support for C0NCQ9 as seed ortholog is 100%.
Bootstrap support for A8HYA5 as seed ortholog is 100%.

Group of orthologs #1549. Best score 70 bits
Score difference with first non-orthologous sequence - A.capsulata:70 C.reinhardtii:70

C0NLD3              	100.00%		A8I2P1              	100.00%
Bootstrap support for C0NLD3 as seed ortholog is 100%.
Bootstrap support for A8I2P1 as seed ortholog is 100%.

Group of orthologs #1550. Best score 70 bits
Score difference with first non-orthologous sequence - A.capsulata:70 C.reinhardtii:70

C0NK06              	100.00%		A8J7C1              	100.00%
Bootstrap support for C0NK06 as seed ortholog is 100%.
Bootstrap support for A8J7C1 as seed ortholog is 100%.

Group of orthologs #1551. Best score 70 bits
Score difference with first non-orthologous sequence - A.capsulata:70 C.reinhardtii:70

C0NPD1              	100.00%		A8J3T4              	100.00%
Bootstrap support for C0NPD1 as seed ortholog is 100%.
Bootstrap support for A8J3T4 as seed ortholog is 100%.

Group of orthologs #1552. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 C.reinhardtii:69

C0ND22              	100.00%		P05726              	100.00%
                    	       		A8J8X9              	6.16%
Bootstrap support for C0ND22 as seed ortholog is 100%.
Bootstrap support for P05726 as seed ortholog is 100%.

Group of orthologs #1553. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 C.reinhardtii:69

C0NYN8              	100.00%		A8J8V1              	100.00%
C0NGU9              	7.26%		
Bootstrap support for C0NYN8 as seed ortholog is 100%.
Bootstrap support for A8J8V1 as seed ortholog is 100%.

Group of orthologs #1554. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 C.reinhardtii:69

C0NVY3              	100.00%		A8JH36              	100.00%
                    	       		A8IMF2              	15.79%
Bootstrap support for C0NVY3 as seed ortholog is 100%.
Bootstrap support for A8JH36 as seed ortholog is 100%.

Group of orthologs #1555. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 C.reinhardtii:69

C0NR44              	100.00%		A8I2N9              	100.00%
Bootstrap support for C0NR44 as seed ortholog is 100%.
Bootstrap support for A8I2N9 as seed ortholog is 100%.

Group of orthologs #1556. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 C.reinhardtii:69

C0NSQ6              	100.00%		A8JIG2              	100.00%
Bootstrap support for C0NSQ6 as seed ortholog is 100%.
Bootstrap support for A8JIG2 as seed ortholog is 100%.

Group of orthologs #1557. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:10 C.reinhardtii:68

C0NPM2              	100.00%		A8HMJ8              	100.00%
C0NWS6              	26.47%		
C0NRD9              	26.18%		
C0NHZ1              	25.60%		
C0NQH1              	22.32%		
C0NTX3              	18.45%		
C0NIH9              	14.69%		
C0NNM3              	5.89%		
Bootstrap support for C0NPM2 as seed ortholog is 56%.
Alternative seed ortholog is C0NLU0 (10 bits away from this cluster)
Bootstrap support for A8HMJ8 as seed ortholog is 100%.

Group of orthologs #1558. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 C.reinhardtii:68

C0NIQ1              	100.00%		A8I528              	100.00%
                    	       		A8HPF4              	59.00%
Bootstrap support for C0NIQ1 as seed ortholog is 100%.
Bootstrap support for A8I528 as seed ortholog is 100%.

Group of orthologs #1559. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 C.reinhardtii:68

C0NQZ8              	100.00%		A8IP12              	100.00%
C0NT25              	14.86%		
Bootstrap support for C0NQZ8 as seed ortholog is 100%.
Bootstrap support for A8IP12 as seed ortholog is 100%.

Group of orthologs #1560. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 C.reinhardtii:68

C0NCQ0              	100.00%		A8HM72              	100.00%
Bootstrap support for C0NCQ0 as seed ortholog is 100%.
Bootstrap support for A8HM72 as seed ortholog is 100%.

Group of orthologs #1561. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 C.reinhardtii:68

C0NJM8              	100.00%		A8ITN4              	100.00%
Bootstrap support for C0NJM8 as seed ortholog is 100%.
Bootstrap support for A8ITN4 as seed ortholog is 100%.

Group of orthologs #1562. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 C.reinhardtii:68

C0NLD6              	100.00%		A8IYZ2              	100.00%
Bootstrap support for C0NLD6 as seed ortholog is 100%.
Bootstrap support for A8IYZ2 as seed ortholog is 100%.

Group of orthologs #1563. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 C.reinhardtii:68

C0NK93              	100.00%		A8J5R2              	100.00%
Bootstrap support for C0NK93 as seed ortholog is 100%.
Bootstrap support for A8J5R2 as seed ortholog is 100%.

Group of orthologs #1564. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 C.reinhardtii:67

C0NFC5              	100.00%		A8HW20              	100.00%
Bootstrap support for C0NFC5 as seed ortholog is 100%.
Bootstrap support for A8HW20 as seed ortholog is 100%.

Group of orthologs #1565. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 C.reinhardtii:67

C0NPX4              	100.00%		A8IGK7              	100.00%
Bootstrap support for C0NPX4 as seed ortholog is 100%.
Bootstrap support for A8IGK7 as seed ortholog is 100%.

Group of orthologs #1566. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 C.reinhardtii:67

C0NNR1              	100.00%		A8IKY9              	100.00%
Bootstrap support for C0NNR1 as seed ortholog is 100%.
Bootstrap support for A8IKY9 as seed ortholog is 100%.

Group of orthologs #1567. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 C.reinhardtii:67

C0NGG8              	100.00%		A8JAQ7              	100.00%
Bootstrap support for C0NGG8 as seed ortholog is 100%.
Bootstrap support for A8JAQ7 as seed ortholog is 100%.

Group of orthologs #1568. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 C.reinhardtii:67

C0NXE3              	100.00%		A8IUT6              	100.00%
Bootstrap support for C0NXE3 as seed ortholog is 100%.
Bootstrap support for A8IUT6 as seed ortholog is 100%.

Group of orthologs #1569. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 C.reinhardtii:67

C0NM16              	100.00%		A8JDK0              	100.00%
Bootstrap support for C0NM16 as seed ortholog is 100%.
Bootstrap support for A8JDK0 as seed ortholog is 100%.

Group of orthologs #1570. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 C.reinhardtii:67

C0P139              	100.00%		A8J0W3              	100.00%
Bootstrap support for C0P139 as seed ortholog is 100%.
Bootstrap support for A8J0W3 as seed ortholog is 100%.

Group of orthologs #1571. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 C.reinhardtii:67

C0NY19              	100.00%		A8J9I9              	100.00%
Bootstrap support for C0NY19 as seed ortholog is 100%.
Bootstrap support for A8J9I9 as seed ortholog is 100%.

Group of orthologs #1572. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 C.reinhardtii:66

C0NZC4              	100.00%		A8IVW7              	100.00%
C0NPA9              	10.82%		A8I4L9              	5.22%
Bootstrap support for C0NZC4 as seed ortholog is 100%.
Bootstrap support for A8IVW7 as seed ortholog is 100%.

Group of orthologs #1573. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 C.reinhardtii:66

C0NLM4              	100.00%		A8I3W3              	100.00%
C0NK71              	21.45%		
Bootstrap support for C0NLM4 as seed ortholog is 100%.
Bootstrap support for A8I3W3 as seed ortholog is 100%.

Group of orthologs #1574. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 C.reinhardtii:66

C0NZB8              	100.00%		A8IT66              	100.00%
                    	       		A8HZC0              	7.45%
Bootstrap support for C0NZB8 as seed ortholog is 100%.
Bootstrap support for A8IT66 as seed ortholog is 100%.

Group of orthologs #1575. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 C.reinhardtii:66

C0NA69              	100.00%		A0FK50              	100.00%
Bootstrap support for C0NA69 as seed ortholog is 100%.
Bootstrap support for A0FK50 as seed ortholog is 100%.

Group of orthologs #1576. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 C.reinhardtii:66

C0NRZ1              	100.00%		A8I406              	100.00%
Bootstrap support for C0NRZ1 as seed ortholog is 100%.
Bootstrap support for A8I406 as seed ortholog is 100%.

Group of orthologs #1577. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 C.reinhardtii:66

C0NHE2              	100.00%		A8IUL9              	100.00%
Bootstrap support for C0NHE2 as seed ortholog is 100%.
Bootstrap support for A8IUL9 as seed ortholog is 100%.

Group of orthologs #1578. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 C.reinhardtii:66

C0NN85              	100.00%		A8J1I2              	100.00%
Bootstrap support for C0NN85 as seed ortholog is 100%.
Bootstrap support for A8J1I2 as seed ortholog is 100%.

Group of orthologs #1579. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:65 C.reinhardtii:65

C0NG76              	100.00%		A8JH65              	100.00%
                    	       		A8IFV5              	31.01%
                    	       		A8IQS8              	28.19%
Bootstrap support for C0NG76 as seed ortholog is 100%.
Bootstrap support for A8JH65 as seed ortholog is 100%.

Group of orthologs #1580. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:65 C.reinhardtii:65

C0NIX0              	100.00%		A8JHP9              	100.00%
                    	       		A8J074              	20.06%
Bootstrap support for C0NIX0 as seed ortholog is 100%.
Bootstrap support for A8JHP9 as seed ortholog is 100%.

Group of orthologs #1581. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:65 C.reinhardtii:65

C0NC31              	100.00%		A8IX67              	100.00%
Bootstrap support for C0NC31 as seed ortholog is 100%.
Bootstrap support for A8IX67 as seed ortholog is 100%.

Group of orthologs #1582. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:3 C.reinhardtii:65

C0NP17              	100.00%		A8IU03              	100.00%
Bootstrap support for C0NP17 as seed ortholog is 86%.
Bootstrap support for A8IU03 as seed ortholog is 100%.

Group of orthologs #1583. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:65 C.reinhardtii:65

C0NLD5              	100.00%		A8J807              	100.00%
Bootstrap support for C0NLD5 as seed ortholog is 100%.
Bootstrap support for A8J807 as seed ortholog is 100%.

Group of orthologs #1584. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:65 C.reinhardtii:65

C0NHQ8              	100.00%		Q6V9A9              	100.00%
Bootstrap support for C0NHQ8 as seed ortholog is 100%.
Bootstrap support for Q6V9A9 as seed ortholog is 100%.

Group of orthologs #1585. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:65 C.reinhardtii:65

C0NXQ5              	100.00%		A8JIK1              	100.00%
Bootstrap support for C0NXQ5 as seed ortholog is 100%.
Bootstrap support for A8JIK1 as seed ortholog is 100%.

Group of orthologs #1586. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:64 C.reinhardtii:64

C0NHN4              	100.00%		A8IQE3              	100.00%
Bootstrap support for C0NHN4 as seed ortholog is 100%.
Bootstrap support for A8IQE3 as seed ortholog is 100%.

Group of orthologs #1587. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:64 C.reinhardtii:64

C0NPF4              	100.00%		A8ICC6              	100.00%
Bootstrap support for C0NPF4 as seed ortholog is 100%.
Bootstrap support for A8ICC6 as seed ortholog is 100%.

Group of orthologs #1588. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:64 C.reinhardtii:64

C0NE19              	100.00%		A8J2G7              	100.00%
Bootstrap support for C0NE19 as seed ortholog is 100%.
Bootstrap support for A8J2G7 as seed ortholog is 100%.

Group of orthologs #1589. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:64 C.reinhardtii:64

C0NJ65              	100.00%		A8IY09              	100.00%
Bootstrap support for C0NJ65 as seed ortholog is 100%.
Bootstrap support for A8IY09 as seed ortholog is 100%.

Group of orthologs #1590. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:64 C.reinhardtii:64

C0NSD6              	100.00%		A8IQJ2              	100.00%
Bootstrap support for C0NSD6 as seed ortholog is 100%.
Bootstrap support for A8IQJ2 as seed ortholog is 100%.

Group of orthologs #1591. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:64 C.reinhardtii:64

C0NE55              	100.00%		A8J8S8              	100.00%
Bootstrap support for C0NE55 as seed ortholog is 100%.
Bootstrap support for A8J8S8 as seed ortholog is 100%.

Group of orthologs #1592. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 C.reinhardtii:63

C0NM19              	100.00%		A8IW07              	100.00%
                    	       		A8JCU2              	16.44%
Bootstrap support for C0NM19 as seed ortholog is 100%.
Bootstrap support for A8IW07 as seed ortholog is 100%.

Group of orthologs #1593. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 C.reinhardtii:63

C0NI15              	100.00%		A8IWT4              	100.00%
Bootstrap support for C0NI15 as seed ortholog is 100%.
Bootstrap support for A8IWT4 as seed ortholog is 100%.

Group of orthologs #1594. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 C.reinhardtii:63

C0NGW1              	100.00%		A8J6P9              	100.00%
Bootstrap support for C0NGW1 as seed ortholog is 100%.
Bootstrap support for A8J6P9 as seed ortholog is 100%.

Group of orthologs #1595. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 C.reinhardtii:63

C0NZ64              	100.00%		A8IZM3              	100.00%
Bootstrap support for C0NZ64 as seed ortholog is 100%.
Bootstrap support for A8IZM3 as seed ortholog is 100%.

Group of orthologs #1596. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 C.reinhardtii:63

C0NSD4              	100.00%		A8JCK9              	100.00%
Bootstrap support for C0NSD4 as seed ortholog is 100%.
Bootstrap support for A8JCK9 as seed ortholog is 100%.

Group of orthologs #1597. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 C.reinhardtii:63

C0NPX0              	100.00%		Q6UKY7              	100.00%
Bootstrap support for C0NPX0 as seed ortholog is 100%.
Bootstrap support for Q6UKY7 as seed ortholog is 100%.

Group of orthologs #1598. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 C.reinhardtii:62

C0NQR7              	100.00%		A8JHA9              	100.00%
C0NU59              	100.00%		A8IYH1              	48.13%
Bootstrap support for C0NQR7 as seed ortholog is 100%.
Bootstrap support for C0NU59 as seed ortholog is 100%.
Bootstrap support for A8JHA9 as seed ortholog is 100%.

Group of orthologs #1599. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 C.reinhardtii:62

C0NCY4              	100.00%		A8I8A8              	100.00%
Bootstrap support for C0NCY4 as seed ortholog is 100%.
Bootstrap support for A8I8A8 as seed ortholog is 100%.

Group of orthologs #1600. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:13 C.reinhardtii:2

C0NKI6              	100.00%		A8IVB1              	100.00%
Bootstrap support for C0NKI6 as seed ortholog is 85%.
Bootstrap support for A8IVB1 as seed ortholog is 57%.
Alternative seed ortholog is A8J0Q9 (2 bits away from this cluster)

Group of orthologs #1601. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 C.reinhardtii:62

C0NS60              	100.00%		A8JGZ2              	100.00%
Bootstrap support for C0NS60 as seed ortholog is 100%.
Bootstrap support for A8JGZ2 as seed ortholog is 100%.

Group of orthologs #1602. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 C.reinhardtii:62

C0NR32              	100.00%		Q6UP31              	100.00%
Bootstrap support for C0NR32 as seed ortholog is 100%.
Bootstrap support for Q6UP31 as seed ortholog is 100%.

Group of orthologs #1603. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:61 C.reinhardtii:61

C0NEB0              	100.00%		A8J1N7              	100.00%
Bootstrap support for C0NEB0 as seed ortholog is 100%.
Bootstrap support for A8J1N7 as seed ortholog is 100%.

Group of orthologs #1604. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:61 C.reinhardtii:61

C0NLL9              	100.00%		A8IUG4              	100.00%
Bootstrap support for C0NLL9 as seed ortholog is 100%.
Bootstrap support for A8IUG4 as seed ortholog is 100%.

Group of orthologs #1605. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:61 C.reinhardtii:61

C0NV09              	100.00%		A8IV25              	100.00%
Bootstrap support for C0NV09 as seed ortholog is 100%.
Bootstrap support for A8IV25 as seed ortholog is 100%.

Group of orthologs #1606. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:61 C.reinhardtii:61

C0NNH6              	100.00%		A8JDN8              	100.00%
Bootstrap support for C0NNH6 as seed ortholog is 100%.
Bootstrap support for A8JDN8 as seed ortholog is 100%.

Group of orthologs #1607. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:61 C.reinhardtii:61

C0NWK2              	100.00%		A8JC08              	100.00%
Bootstrap support for C0NWK2 as seed ortholog is 100%.
Bootstrap support for A8JC08 as seed ortholog is 100%.

Group of orthologs #1608. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:61 C.reinhardtii:61

C0NSG1              	100.00%		Q9ZTA7              	100.00%
Bootstrap support for C0NSG1 as seed ortholog is 100%.
Bootstrap support for Q9ZTA7 as seed ortholog is 100%.

Group of orthologs #1609. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:61 C.reinhardtii:61

C0NZ17              	100.00%		A8JH54              	100.00%
Bootstrap support for C0NZ17 as seed ortholog is 100%.
Bootstrap support for A8JH54 as seed ortholog is 100%.

Group of orthologs #1610. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 C.reinhardtii:60

C0NIP0              	100.00%		A8HX89              	100.00%
Bootstrap support for C0NIP0 as seed ortholog is 100%.
Bootstrap support for A8HX89 as seed ortholog is 100%.

Group of orthologs #1611. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 C.reinhardtii:60

C0NG25              	100.00%		A8I8V9              	100.00%
Bootstrap support for C0NG25 as seed ortholog is 100%.
Bootstrap support for A8I8V9 as seed ortholog is 100%.

Group of orthologs #1612. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 C.reinhardtii:60

C0NM21              	100.00%		A8HSI6              	100.00%
Bootstrap support for C0NM21 as seed ortholog is 100%.
Bootstrap support for A8HSI6 as seed ortholog is 100%.

Group of orthologs #1613. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 C.reinhardtii:60

C0NTK8              	100.00%		A8HP31              	100.00%
Bootstrap support for C0NTK8 as seed ortholog is 100%.
Bootstrap support for A8HP31 as seed ortholog is 100%.

Group of orthologs #1614. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 C.reinhardtii:60

C0NMG4              	100.00%		A8IFE6              	100.00%
Bootstrap support for C0NMG4 as seed ortholog is 100%.
Bootstrap support for A8IFE6 as seed ortholog is 100%.

Group of orthologs #1615. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 C.reinhardtii:60

C0NY90              	100.00%		A8I0K9              	100.00%
Bootstrap support for C0NY90 as seed ortholog is 100%.
Bootstrap support for A8I0K9 as seed ortholog is 100%.

Group of orthologs #1616. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 C.reinhardtii:60

C0NB37              	100.00%		A8JC42              	100.00%
Bootstrap support for C0NB37 as seed ortholog is 100%.
Bootstrap support for A8JC42 as seed ortholog is 100%.

Group of orthologs #1617. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 C.reinhardtii:60

C0NXF6              	100.00%		A8J1X2              	100.00%
Bootstrap support for C0NXF6 as seed ortholog is 100%.
Bootstrap support for A8J1X2 as seed ortholog is 100%.

Group of orthologs #1618. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 C.reinhardtii:60

C0NR55              	100.00%		A8JCL2              	100.00%
Bootstrap support for C0NR55 as seed ortholog is 100%.
Bootstrap support for A8JCL2 as seed ortholog is 100%.

Group of orthologs #1619. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 C.reinhardtii:60

C0NQE7              	100.00%		A8JGT2              	100.00%
Bootstrap support for C0NQE7 as seed ortholog is 100%.
Bootstrap support for A8JGT2 as seed ortholog is 100%.

Group of orthologs #1620. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.reinhardtii:59

C0NJI3              	100.00%		A8I0B6              	100.00%
Bootstrap support for C0NJI3 as seed ortholog is 100%.
Bootstrap support for A8I0B6 as seed ortholog is 100%.

Group of orthologs #1621. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.reinhardtii:59

C0NR91              	100.00%		A8HPP5              	100.00%
Bootstrap support for C0NR91 as seed ortholog is 100%.
Bootstrap support for A8HPP5 as seed ortholog is 100%.

Group of orthologs #1622. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.reinhardtii:59

C0NPJ3              	100.00%		A8IZY5              	100.00%
Bootstrap support for C0NPJ3 as seed ortholog is 100%.
Bootstrap support for A8IZY5 as seed ortholog is 100%.

Group of orthologs #1623. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.reinhardtii:59

C0NHK1              	100.00%		A8JFI0              	100.00%
Bootstrap support for C0NHK1 as seed ortholog is 100%.
Bootstrap support for A8JFI0 as seed ortholog is 100%.

Group of orthologs #1624. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.reinhardtii:59

C0NSP3              	100.00%		A8J5M0              	100.00%
Bootstrap support for C0NSP3 as seed ortholog is 100%.
Bootstrap support for A8J5M0 as seed ortholog is 100%.

Group of orthologs #1625. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.reinhardtii:59

C0NVA2              	100.00%		A8J2P4              	100.00%
Bootstrap support for C0NVA2 as seed ortholog is 100%.
Bootstrap support for A8J2P4 as seed ortholog is 100%.

Group of orthologs #1626. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.reinhardtii:59

C0NI86              	100.00%		A8JHI6              	100.00%
Bootstrap support for C0NI86 as seed ortholog is 100%.
Bootstrap support for A8JHI6 as seed ortholog is 100%.

Group of orthologs #1627. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 C.reinhardtii:59

C0NKP2              	100.00%		A8JFS1              	100.00%
Bootstrap support for C0NKP2 as seed ortholog is 100%.
Bootstrap support for A8JFS1 as seed ortholog is 100%.

Group of orthologs #1628. Best score 58 bits
Score difference with first non-orthologous sequence - A.capsulata:58 C.reinhardtii:58

C0NW96              	100.00%		A8JB57              	100.00%
                    	       		A8JB90              	70.00%
Bootstrap support for C0NW96 as seed ortholog is 100%.
Bootstrap support for A8JB57 as seed ortholog is 100%.

Group of orthologs #1629. Best score 58 bits
Score difference with first non-orthologous sequence - A.capsulata:58 C.reinhardtii:58

C0NLQ3              	100.00%		A2PZD3              	100.00%
Bootstrap support for C0NLQ3 as seed ortholog is 100%.
Bootstrap support for A2PZD3 as seed ortholog is 100%.

Group of orthologs #1630. Best score 58 bits
Score difference with first non-orthologous sequence - A.capsulata:58 C.reinhardtii:58

C0NQC4              	100.00%		A8IGU4              	100.00%
Bootstrap support for C0NQC4 as seed ortholog is 100%.
Bootstrap support for A8IGU4 as seed ortholog is 100%.

Group of orthologs #1631. Best score 58 bits
Score difference with first non-orthologous sequence - A.capsulata:58 C.reinhardtii:58

C0NGC1              	100.00%		A8JB53              	100.00%
Bootstrap support for C0NGC1 as seed ortholog is 100%.
Bootstrap support for A8JB53 as seed ortholog is 100%.

Group of orthologs #1632. Best score 58 bits
Score difference with first non-orthologous sequence - A.capsulata:58 C.reinhardtii:58

C0NEM4              	100.00%		A8JGN3              	100.00%
Bootstrap support for C0NEM4 as seed ortholog is 100%.
Bootstrap support for A8JGN3 as seed ortholog is 100%.

Group of orthologs #1633. Best score 58 bits
Score difference with first non-orthologous sequence - A.capsulata:58 C.reinhardtii:58

C0NT90              	100.00%		A8JIH9              	100.00%
Bootstrap support for C0NT90 as seed ortholog is 100%.
Bootstrap support for A8JIH9 as seed ortholog is 100%.

Group of orthologs #1634. Best score 58 bits
Score difference with first non-orthologous sequence - A.capsulata:58 C.reinhardtii:58

C0NXC4              	100.00%		A8JGS4              	100.00%
Bootstrap support for C0NXC4 as seed ortholog is 100%.
Bootstrap support for A8JGS4 as seed ortholog is 100%.

Group of orthologs #1635. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 C.reinhardtii:57

C0NLC1              	100.00%		A8HS11              	100.00%
Bootstrap support for C0NLC1 as seed ortholog is 100%.
Bootstrap support for A8HS11 as seed ortholog is 100%.

Group of orthologs #1636. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 C.reinhardtii:57

C0NCP9              	100.00%		A8J8W4              	100.00%
Bootstrap support for C0NCP9 as seed ortholog is 100%.
Bootstrap support for A8J8W4 as seed ortholog is 100%.

Group of orthologs #1637. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 C.reinhardtii:57

C0NQV2              	100.00%		A8J585              	100.00%
Bootstrap support for C0NQV2 as seed ortholog is 100%.
Bootstrap support for A8J585 as seed ortholog is 100%.

Group of orthologs #1638. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 C.reinhardtii:57

C0NZJ3              	100.00%		A8J652              	100.00%
Bootstrap support for C0NZJ3 as seed ortholog is 100%.
Bootstrap support for A8J652 as seed ortholog is 100%.

Group of orthologs #1639. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 C.reinhardtii:56

C0NSK3              	100.00%		A8I1J2              	100.00%
Bootstrap support for C0NSK3 as seed ortholog is 100%.
Bootstrap support for A8I1J2 as seed ortholog is 100%.

Group of orthologs #1640. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 C.reinhardtii:56

C0NL61              	100.00%		A8IYB1              	100.00%
Bootstrap support for C0NL61 as seed ortholog is 100%.
Bootstrap support for A8IYB1 as seed ortholog is 100%.

Group of orthologs #1641. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 C.reinhardtii:55

C0NZ44              	100.00%		A8JBZ2              	100.00%
C0NZ07              	9.55%		A8IU49              	10.65%
                    	       		A8I5E5              	6.16%
                    	       		A8JH47              	5.99%
Bootstrap support for C0NZ44 as seed ortholog is 100%.
Bootstrap support for A8JBZ2 as seed ortholog is 100%.

Group of orthologs #1642. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 C.reinhardtii:55

C0P152              	100.00%		A8HNU7              	100.00%
                    	       		A8HNU9              	95.18%
                    	       		A8J2Z3              	11.57%
                    	       		A8HPU8              	9.16%
Bootstrap support for C0P152 as seed ortholog is 100%.
Bootstrap support for A8HNU7 as seed ortholog is 100%.

Group of orthologs #1643. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 C.reinhardtii:9

C0NPC1              	100.00%		A8J2W4              	100.00%
Bootstrap support for C0NPC1 as seed ortholog is 100%.
Bootstrap support for A8J2W4 as seed ortholog is 50%.
Alternative seed ortholog is A8HTC4 (9 bits away from this cluster)

Group of orthologs #1644. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 C.reinhardtii:55

C0NT79              	100.00%		A8J3E5              	100.00%
Bootstrap support for C0NT79 as seed ortholog is 100%.
Bootstrap support for A8J3E5 as seed ortholog is 100%.

Group of orthologs #1645. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 C.reinhardtii:54

C0NHV8              	100.00%		A8HMB6              	100.00%
C0NX41              	22.24%		
Bootstrap support for C0NHV8 as seed ortholog is 100%.
Bootstrap support for A8HMB6 as seed ortholog is 100%.

Group of orthologs #1646. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 C.reinhardtii:54

C0NIF2              	100.00%		A8HP61              	100.00%
                    	       		A8I8X0              	11.95%
Bootstrap support for C0NIF2 as seed ortholog is 100%.
Bootstrap support for A8HP61 as seed ortholog is 100%.

Group of orthologs #1647. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 C.reinhardtii:4

C0NH90              	100.00%		A8HVN9              	100.00%
C0NJK7              	5.73%		
Bootstrap support for C0NH90 as seed ortholog is 100%.
Bootstrap support for A8HVN9 as seed ortholog is 56%.
Alternative seed ortholog is A8IEX6 (4 bits away from this cluster)

Group of orthologs #1648. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:2 C.reinhardtii:9

C0ND97              	100.00%		A8IRU4              	100.00%
Bootstrap support for C0ND97 as seed ortholog is 46%.
Alternative seed ortholog is C0NE76 (2 bits away from this cluster)
Bootstrap support for A8IRU4 as seed ortholog is 70%.
Alternative seed ortholog is A8J9H2 (9 bits away from this cluster)

Group of orthologs #1649. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 C.reinhardtii:54

C0NQ60              	100.00%		A8I4R4              	100.00%
Bootstrap support for C0NQ60 as seed ortholog is 100%.
Bootstrap support for A8I4R4 as seed ortholog is 100%.

Group of orthologs #1650. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 C.reinhardtii:54

C0NEF3              	100.00%		A8J2U3              	100.00%
Bootstrap support for C0NEF3 as seed ortholog is 100%.
Bootstrap support for A8J2U3 as seed ortholog is 100%.

Group of orthologs #1651. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:2 C.reinhardtii:54

C0NLE8              	100.00%		A8IZM2              	100.00%
Bootstrap support for C0NLE8 as seed ortholog is 44%.
Alternative seed ortholog is C0NMB3 (2 bits away from this cluster)
Bootstrap support for A8IZM2 as seed ortholog is 100%.

Group of orthologs #1652. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 C.reinhardtii:54

C0NWW5              	100.00%		A8IGB8              	100.00%
Bootstrap support for C0NWW5 as seed ortholog is 100%.
Bootstrap support for A8IGB8 as seed ortholog is 100%.

Group of orthologs #1653. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 C.reinhardtii:54

C0NPY6              	100.00%		A8J374              	100.00%
Bootstrap support for C0NPY6 as seed ortholog is 100%.
Bootstrap support for A8J374 as seed ortholog is 100%.

Group of orthologs #1654. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 C.reinhardtii:54

C0NZV4              	100.00%		A8J7X4              	100.00%
Bootstrap support for C0NZV4 as seed ortholog is 100%.
Bootstrap support for A8J7X4 as seed ortholog is 100%.

Group of orthologs #1655. Best score 53 bits
Score difference with first non-orthologous sequence - A.capsulata:53 C.reinhardtii:53

C0NJQ9              	100.00%		A8HYL5              	100.00%
Bootstrap support for C0NJQ9 as seed ortholog is 100%.
Bootstrap support for A8HYL5 as seed ortholog is 100%.

Group of orthologs #1656. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 C.reinhardtii:52

C0NY13              	100.00%		A8JFB8              	100.00%
C0NR60              	28.65%		A8J006              	35.16%
C0NGY1              	26.93%		A8J9M5              	29.67%
C0NQF7              	25.86%		A8IZ81              	28.21%
C0NT04              	24.89%		A8IRP0              	22.95%
C0NW56              	21.14%		A8J3L0              	21.49%
C0NK68              	19.64%		A8JHW9              	19.90%
C0NVD5              	18.35%		A8J0K6              	17.95%
C0NTN1              	17.70%		
C0NRP0              	17.17%		
C0NFY9              	15.67%		
C0NB98              	15.34%		
C0NL44              	13.41%		
C0NLH3              	13.09%		
C0NPE4              	12.12%		
C0NBL5              	11.91%		
C0NU82              	11.59%		
C0NIM5              	11.48%		
C0NWI4              	10.09%		
C0NHN2              	9.23%		
C0NN53              	9.23%		
C0NLM6              	6.22%		
Bootstrap support for C0NY13 as seed ortholog is 100%.
Bootstrap support for A8JFB8 as seed ortholog is 100%.

Group of orthologs #1657. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 C.reinhardtii:52

C0NS94              	100.00%		A8I8N0              	100.00%
                    	       		A8IL71              	16.10%
Bootstrap support for C0NS94 as seed ortholog is 100%.
Bootstrap support for A8I8N0 as seed ortholog is 100%.

Group of orthologs #1658. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 C.reinhardtii:52

C0NU71              	100.00%		A8JBS0              	100.00%
                    	       		A8IYR3              	7.92%
Bootstrap support for C0NU71 as seed ortholog is 100%.
Bootstrap support for A8JBS0 as seed ortholog is 100%.

Group of orthologs #1659. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 C.reinhardtii:52

C0NJR4              	100.00%		A8IVZ4              	100.00%
Bootstrap support for C0NJR4 as seed ortholog is 100%.
Bootstrap support for A8IVZ4 as seed ortholog is 100%.

Group of orthologs #1660. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 C.reinhardtii:52

C0NK96              	100.00%		A8J2N1              	100.00%
Bootstrap support for C0NK96 as seed ortholog is 100%.
Bootstrap support for A8J2N1 as seed ortholog is 100%.

Group of orthologs #1661. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 C.reinhardtii:52

C0NEX7              	100.00%		A8JFR8              	100.00%
Bootstrap support for C0NEX7 as seed ortholog is 100%.
Bootstrap support for A8JFR8 as seed ortholog is 100%.

Group of orthologs #1662. Best score 51 bits
Score difference with first non-orthologous sequence - A.capsulata:51 C.reinhardtii:51

C0NEX2              	100.00%		A8HUC9              	100.00%
C0NPA2              	23.14%		A8JDX3              	27.78%
Bootstrap support for C0NEX2 as seed ortholog is 100%.
Bootstrap support for A8HUC9 as seed ortholog is 100%.

Group of orthologs #1663. Best score 51 bits
Score difference with first non-orthologous sequence - A.capsulata:51 C.reinhardtii:51

C0NLS1              	100.00%		A8IG60              	100.00%
Bootstrap support for C0NLS1 as seed ortholog is 100%.
Bootstrap support for A8IG60 as seed ortholog is 100%.

Group of orthologs #1664. Best score 51 bits
Score difference with first non-orthologous sequence - A.capsulata:51 C.reinhardtii:51

C0NAW5              	100.00%		Q6UP32              	100.00%
Bootstrap support for C0NAW5 as seed ortholog is 100%.
Bootstrap support for Q6UP32 as seed ortholog is 100%.

Group of orthologs #1665. Best score 51 bits
Score difference with first non-orthologous sequence - A.capsulata:51 C.reinhardtii:51

C0P1A8              	100.00%		A8JF05              	100.00%
Bootstrap support for C0P1A8 as seed ortholog is 100%.
Bootstrap support for A8JF05 as seed ortholog is 100%.

Group of orthologs #1666. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 C.reinhardtii:50

C0NBT3              	100.00%		A8J1X7              	100.00%
Bootstrap support for C0NBT3 as seed ortholog is 100%.
Bootstrap support for A8J1X7 as seed ortholog is 100%.

Group of orthologs #1667. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 C.reinhardtii:50

C0NMG9              	100.00%		A8J449              	100.00%
Bootstrap support for C0NMG9 as seed ortholog is 100%.
Bootstrap support for A8J449 as seed ortholog is 100%.

Group of orthologs #1668. Best score 49 bits
Score difference with first non-orthologous sequence - A.capsulata:49 C.reinhardtii:49

C0NCC1              	100.00%		A8INM9              	100.00%
C0NA74              	45.05%		
C0NNZ4              	23.11%		
C0NYJ9              	18.71%		
C0NKH1              	18.32%		
C0NAS2              	17.63%		
C0NNN2              	15.57%		
C0NDI7              	13.91%		
C0NZ43              	13.91%		
C0NS77              	13.42%		
C0NTB0              	13.03%		
C0NJ26              	11.17%		
C0NXN5              	10.97%		
C0P129              	9.99%		
C0NDJ1              	9.70%		
C0NC97              	8.72%		
C0NZ10              	8.03%		
C0NSE0              	5.39%		
Bootstrap support for C0NCC1 as seed ortholog is 100%.
Bootstrap support for A8INM9 as seed ortholog is 100%.

Group of orthologs #1669. Best score 49 bits
Score difference with first non-orthologous sequence - A.capsulata:49 C.reinhardtii:49

C0NC52              	100.00%		Q6Y682              	100.00%
                    	       		A8IIK4              	18.97%
Bootstrap support for C0NC52 as seed ortholog is 100%.
Bootstrap support for Q6Y682 as seed ortholog is 100%.

Group of orthologs #1670. Best score 49 bits
Score difference with first non-orthologous sequence - A.capsulata:49 C.reinhardtii:49

C0NCB8              	100.00%		A8I6P9              	100.00%
Bootstrap support for C0NCB8 as seed ortholog is 100%.
Bootstrap support for A8I6P9 as seed ortholog is 100%.

Group of orthologs #1671. Best score 48 bits
Score difference with first non-orthologous sequence - A.capsulata:48 C.reinhardtii:48

C0NX28              	100.00%		A8I4T4              	100.00%
                    	       		A8IVT1              	36.02%
                    	       		A8J9R0              	34.95%
                    	       		A8J9V6              	34.14%
                    	       		A8J9W3              	33.60%
                    	       		A8ISN9              	33.60%
                    	       		A8J9C7              	24.73%
                    	       		A8J759              	13.44%
                    	       		A8HN78              	12.10%
Bootstrap support for C0NX28 as seed ortholog is 100%.
Bootstrap support for A8I4T4 as seed ortholog is 100%.

Group of orthologs #1672. Best score 48 bits
Score difference with first non-orthologous sequence - A.capsulata:48 C.reinhardtii:48

C0NQ98              	100.00%		A8IQZ1              	100.00%
Bootstrap support for C0NQ98 as seed ortholog is 100%.
Bootstrap support for A8IQZ1 as seed ortholog is 100%.

Group of orthologs #1673. Best score 48 bits
Score difference with first non-orthologous sequence - A.capsulata:48 C.reinhardtii:48

C0NZ92              	100.00%		Q6UKY8              	100.00%
Bootstrap support for C0NZ92 as seed ortholog is 100%.
Bootstrap support for Q6UKY8 as seed ortholog is 100%.

Group of orthologs #1674. Best score 47 bits
Score difference with first non-orthologous sequence - A.capsulata:47 C.reinhardtii:47

C0NC21              	100.00%		A8IYH5              	100.00%
Bootstrap support for C0NC21 as seed ortholog is 100%.
Bootstrap support for A8IYH5 as seed ortholog is 100%.

Group of orthologs #1675. Best score 47 bits
Score difference with first non-orthologous sequence - A.capsulata:47 C.reinhardtii:47

C0P0J1              	100.00%		A8IRB7              	100.00%
Bootstrap support for C0P0J1 as seed ortholog is 100%.
Bootstrap support for A8IRB7 as seed ortholog is 100%.

Group of orthologs #1676. Best score 47 bits
Score difference with first non-orthologous sequence - A.capsulata:47 C.reinhardtii:47

C0NVE3              	100.00%		A8J1W1              	100.00%
Bootstrap support for C0NVE3 as seed ortholog is 100%.
Bootstrap support for A8J1W1 as seed ortholog is 100%.

Group of orthologs #1677. Best score 46 bits
Score difference with first non-orthologous sequence - A.capsulata:46 C.reinhardtii:46

C0NCD8              	100.00%		A8JHD2              	100.00%
Bootstrap support for C0NCD8 as seed ortholog is 100%.
Bootstrap support for A8JHD2 as seed ortholog is 100%.

Group of orthologs #1678. Best score 46 bits
Score difference with first non-orthologous sequence - A.capsulata:46 C.reinhardtii:46

C0P0G9              	100.00%		A8JCU9              	100.00%
Bootstrap support for C0P0G9 as seed ortholog is 100%.
Bootstrap support for A8JCU9 as seed ortholog is 100%.

Group of orthologs #1679. Best score 46 bits
Score difference with first non-orthologous sequence - A.capsulata:46 C.reinhardtii:46

C0NUA3              	100.00%		Q6TH88              	100.00%
Bootstrap support for C0NUA3 as seed ortholog is 100%.
Bootstrap support for Q6TH88 as seed ortholog is 100%.

Group of orthologs #1680. Best score 45 bits
Score difference with first non-orthologous sequence - A.capsulata:45 C.reinhardtii:45

C0NVU4              	100.00%		A8I322              	100.00%
                    	       		A8JGB8              	9.82%
                    	       		A8JI96              	6.25%
Bootstrap support for C0NVU4 as seed ortholog is 100%.
Bootstrap support for A8I322 as seed ortholog is 100%.

Group of orthologs #1681. Best score 45 bits
Score difference with first non-orthologous sequence - A.capsulata:45 C.reinhardtii:45

C0NX87              	100.00%		A8J0D8              	100.00%
                    	       		A8I2M4              	9.26%
                    	       		A8J7K3              	7.87%
Bootstrap support for C0NX87 as seed ortholog is 100%.
Bootstrap support for A8J0D8 as seed ortholog is 100%.

Group of orthologs #1682. Best score 45 bits
Score difference with first non-orthologous sequence - A.capsulata:45 C.reinhardtii:1

C0NHS9              	100.00%		A8I137              	100.00%
Bootstrap support for C0NHS9 as seed ortholog is 100%.
Bootstrap support for A8I137 as seed ortholog is 47%.
Alternative seed ortholog is A8JH63 (1 bits away from this cluster)

Group of orthologs #1683. Best score 45 bits
Score difference with first non-orthologous sequence - A.capsulata:45 C.reinhardtii:45

C0NHF5              	100.00%		A8IDF6              	100.00%
Bootstrap support for C0NHF5 as seed ortholog is 100%.
Bootstrap support for A8IDF6 as seed ortholog is 100%.

Group of orthologs #1684. Best score 45 bits
Score difference with first non-orthologous sequence - A.capsulata:45 C.reinhardtii:45

C0NNL1              	100.00%		A8J6N0              	100.00%
Bootstrap support for C0NNL1 as seed ortholog is 100%.
Bootstrap support for A8J6N0 as seed ortholog is 100%.

Group of orthologs #1685. Best score 44 bits
Score difference with first non-orthologous sequence - A.capsulata:44 C.reinhardtii:44

C0NRI3              	100.00%		A8IV41              	100.00%
Bootstrap support for C0NRI3 as seed ortholog is 100%.
Bootstrap support for A8IV41 as seed ortholog is 100%.

Group of orthologs #1686. Best score 41 bits
Score difference with first non-orthologous sequence - A.capsulata:41 C.reinhardtii:41

C0NQH6              	100.00%		A8JAF5              	100.00%
Bootstrap support for C0NQH6 as seed ortholog is 100%.
Bootstrap support for A8JAF5 as seed ortholog is 100%.