###################################
396 groups of orthologs
477 in-paralogs from A.capsulata
498 in-paralogs from B.thetaiotaomicron
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 1332 bits
Score difference with first non-orthologous sequence - A.capsulata:1332 B.thetaiotaomicron:1332

C0NYC5              	100.00%		Q8AAB2              	100.00%
Bootstrap support for C0NYC5 as seed ortholog is 100%.
Bootstrap support for Q8AAB2 as seed ortholog is 100%.

Group of orthologs #2. Best score 1098 bits
Score difference with first non-orthologous sequence - A.capsulata:1098 B.thetaiotaomicron:1098

C0NFV4              	100.00%		Q8AAA8              	100.00%
                    	       		Q8A105              	34.41%
Bootstrap support for C0NFV4 as seed ortholog is 100%.
Bootstrap support for Q8AAA8 as seed ortholog is 100%.

Group of orthologs #3. Best score 928 bits
Score difference with first non-orthologous sequence - A.capsulata:928 B.thetaiotaomicron:928

C0NZ30              	100.00%		Q8A8M0              	100.00%
Bootstrap support for C0NZ30 as seed ortholog is 100%.
Bootstrap support for Q8A8M0 as seed ortholog is 100%.

Group of orthologs #4. Best score 873 bits
Score difference with first non-orthologous sequence - A.capsulata:138 B.thetaiotaomicron:873

C0NH60              	100.00%		Q8A614              	100.00%
Bootstrap support for C0NH60 as seed ortholog is 99%.
Bootstrap support for Q8A614 as seed ortholog is 100%.

Group of orthologs #5. Best score 721 bits
Score difference with first non-orthologous sequence - A.capsulata:25 B.thetaiotaomicron:222

C0NKY1              	100.00%		Q89YY3              	100.00%
Bootstrap support for C0NKY1 as seed ortholog is 72%.
Alternative seed ortholog is C0NKB7 (25 bits away from this cluster)
Bootstrap support for Q89YY3 as seed ortholog is 99%.

Group of orthologs #6. Best score 621 bits
Score difference with first non-orthologous sequence - A.capsulata:64 B.thetaiotaomicron:564

C0P013              	100.00%		Q89YW6              	100.00%
Bootstrap support for C0P013 as seed ortholog is 92%.
Bootstrap support for Q89YW6 as seed ortholog is 100%.

Group of orthologs #7. Best score 611 bits
Score difference with first non-orthologous sequence - A.capsulata:611 B.thetaiotaomicron:611

C0NTE1              	100.00%		Q8A6Z2              	100.00%
Bootstrap support for C0NTE1 as seed ortholog is 100%.
Bootstrap support for Q8A6Z2 as seed ortholog is 100%.

Group of orthologs #8. Best score 589 bits
Score difference with first non-orthologous sequence - A.capsulata:589 B.thetaiotaomicron:589

C0P0C5              	100.00%		Q8A9V4              	100.00%
Bootstrap support for C0P0C5 as seed ortholog is 100%.
Bootstrap support for Q8A9V4 as seed ortholog is 100%.

Group of orthologs #9. Best score 586 bits
Score difference with first non-orthologous sequence - A.capsulata:390 B.thetaiotaomicron:586

C0NL66              	100.00%		Q8A9K9              	100.00%
Bootstrap support for C0NL66 as seed ortholog is 100%.
Bootstrap support for Q8A9K9 as seed ortholog is 100%.

Group of orthologs #10. Best score 574 bits
Score difference with first non-orthologous sequence - A.capsulata:574 B.thetaiotaomicron:574

C0P0C4              	100.00%		Q8A9P4              	100.00%
Bootstrap support for C0P0C4 as seed ortholog is 100%.
Bootstrap support for Q8A9P4 as seed ortholog is 100%.

Group of orthologs #11. Best score 552 bits
Score difference with first non-orthologous sequence - A.capsulata:473 B.thetaiotaomicron:552

C0P0B3              	100.00%		Q8A6P8              	100.00%
Bootstrap support for C0P0B3 as seed ortholog is 100%.
Bootstrap support for Q8A6P8 as seed ortholog is 100%.

Group of orthologs #12. Best score 540 bits
Score difference with first non-orthologous sequence - A.capsulata:540 B.thetaiotaomicron:540

C0NG75              	100.00%		Q8A9U7              	100.00%
Bootstrap support for C0NG75 as seed ortholog is 100%.
Bootstrap support for Q8A9U7 as seed ortholog is 100%.

Group of orthologs #13. Best score 531 bits
Score difference with first non-orthologous sequence - A.capsulata:531 B.thetaiotaomicron:531

C0NJC3              	100.00%		Q8A407              	100.00%
Bootstrap support for C0NJC3 as seed ortholog is 100%.
Bootstrap support for Q8A407 as seed ortholog is 100%.

Group of orthologs #14. Best score 530 bits
Score difference with first non-orthologous sequence - A.capsulata:400 B.thetaiotaomicron:387

C0NZL9              	100.00%		Q8AA33              	100.00%
Bootstrap support for C0NZL9 as seed ortholog is 100%.
Bootstrap support for Q8AA33 as seed ortholog is 100%.

Group of orthologs #15. Best score 519 bits
Score difference with first non-orthologous sequence - A.capsulata:519 B.thetaiotaomicron:519

C0NKL8              	100.00%		Q8A0M6              	100.00%
Bootstrap support for C0NKL8 as seed ortholog is 100%.
Bootstrap support for Q8A0M6 as seed ortholog is 100%.

Group of orthologs #16. Best score 508 bits
Score difference with first non-orthologous sequence - A.capsulata:130 B.thetaiotaomicron:508

C0NGZ7              	100.00%		Q8A0L4              	100.00%
Bootstrap support for C0NGZ7 as seed ortholog is 99%.
Bootstrap support for Q8A0L4 as seed ortholog is 100%.

Group of orthologs #17. Best score 503 bits
Score difference with first non-orthologous sequence - A.capsulata:129 B.thetaiotaomicron:209

C0NUK7              	100.00%		Q8A474              	100.00%
Bootstrap support for C0NUK7 as seed ortholog is 98%.
Bootstrap support for Q8A474 as seed ortholog is 99%.

Group of orthologs #18. Best score 501 bits
Score difference with first non-orthologous sequence - A.capsulata:358 B.thetaiotaomicron:501

C0NIQ0              	100.00%		Q8AAB4              	100.00%
Bootstrap support for C0NIQ0 as seed ortholog is 100%.
Bootstrap support for Q8AAB4 as seed ortholog is 100%.

Group of orthologs #19. Best score 495 bits
Score difference with first non-orthologous sequence - A.capsulata:321 B.thetaiotaomicron:495

C0NG27              	100.00%		Q89ZM4              	100.00%
Bootstrap support for C0NG27 as seed ortholog is 99%.
Bootstrap support for Q89ZM4 as seed ortholog is 100%.

Group of orthologs #20. Best score 474 bits
Score difference with first non-orthologous sequence - A.capsulata:381 B.thetaiotaomicron:474

C0NJ54              	100.00%		Q8A463              	100.00%
Bootstrap support for C0NJ54 as seed ortholog is 100%.
Bootstrap support for Q8A463 as seed ortholog is 100%.

Group of orthologs #21. Best score 472 bits
Score difference with first non-orthologous sequence - A.capsulata:472 B.thetaiotaomicron:472

C0NZU1              	100.00%		Q8A2N7              	100.00%
Bootstrap support for C0NZU1 as seed ortholog is 100%.
Bootstrap support for Q8A2N7 as seed ortholog is 100%.

Group of orthologs #22. Best score 462 bits
Score difference with first non-orthologous sequence - A.capsulata:81 B.thetaiotaomicron:268

C0NW33              	100.00%		Q8A4Q6              	100.00%
C0NKA9              	40.55%		
Bootstrap support for C0NW33 as seed ortholog is 88%.
Bootstrap support for Q8A4Q6 as seed ortholog is 99%.

Group of orthologs #23. Best score 462 bits
Score difference with first non-orthologous sequence - A.capsulata:341 B.thetaiotaomicron:462

C0NNE2              	100.00%		Q8A6L7              	100.00%
Bootstrap support for C0NNE2 as seed ortholog is 100%.
Bootstrap support for Q8A6L7 as seed ortholog is 100%.

Group of orthologs #24. Best score 443 bits
Score difference with first non-orthologous sequence - A.capsulata:443 B.thetaiotaomicron:443

C0NRN1              	100.00%		Q89ZV8              	100.00%
Bootstrap support for C0NRN1 as seed ortholog is 100%.
Bootstrap support for Q89ZV8 as seed ortholog is 100%.

Group of orthologs #25. Best score 442 bits
Score difference with first non-orthologous sequence - A.capsulata:442 B.thetaiotaomicron:442

C0P131              	100.00%		Q8AAB1              	100.00%
Bootstrap support for C0P131 as seed ortholog is 100%.
Bootstrap support for Q8AAB1 as seed ortholog is 100%.

Group of orthologs #26. Best score 440 bits
Score difference with first non-orthologous sequence - A.capsulata:440 B.thetaiotaomicron:440

C0NGS3              	100.00%		Q8A287              	100.00%
Bootstrap support for C0NGS3 as seed ortholog is 100%.
Bootstrap support for Q8A287 as seed ortholog is 100%.

Group of orthologs #27. Best score 437 bits
Score difference with first non-orthologous sequence - A.capsulata:437 B.thetaiotaomicron:437

C0NSB3              	100.00%		Q8A8E5              	100.00%
Bootstrap support for C0NSB3 as seed ortholog is 100%.
Bootstrap support for Q8A8E5 as seed ortholog is 100%.

Group of orthologs #28. Best score 431 bits
Score difference with first non-orthologous sequence - A.capsulata:166 B.thetaiotaomicron:241

C0NN06              	100.00%		Q8A8S6              	100.00%
Bootstrap support for C0NN06 as seed ortholog is 99%.
Bootstrap support for Q8A8S6 as seed ortholog is 99%.

Group of orthologs #29. Best score 431 bits
Score difference with first non-orthologous sequence - A.capsulata:431 B.thetaiotaomicron:431

C0NZL2              	100.00%		Q8A612              	100.00%
Bootstrap support for C0NZL2 as seed ortholog is 100%.
Bootstrap support for Q8A612 as seed ortholog is 100%.

Group of orthologs #30. Best score 426 bits
Score difference with first non-orthologous sequence - A.capsulata:275 B.thetaiotaomicron:426

C0NGH3              	100.00%		Q8A2A1              	100.00%
Bootstrap support for C0NGH3 as seed ortholog is 100%.
Bootstrap support for Q8A2A1 as seed ortholog is 100%.

Group of orthologs #31. Best score 424 bits
Score difference with first non-orthologous sequence - A.capsulata:424 B.thetaiotaomicron:424

C0NAW3              	100.00%		Q8A9S8              	100.00%
Bootstrap support for C0NAW3 as seed ortholog is 100%.
Bootstrap support for Q8A9S8 as seed ortholog is 100%.

Group of orthologs #32. Best score 421 bits
Score difference with first non-orthologous sequence - A.capsulata:421 B.thetaiotaomicron:421

C0NEQ8              	100.00%		Q89YP1              	100.00%
Bootstrap support for C0NEQ8 as seed ortholog is 100%.
Bootstrap support for Q89YP1 as seed ortholog is 100%.

Group of orthologs #33. Best score 420 bits
Score difference with first non-orthologous sequence - A.capsulata:420 B.thetaiotaomicron:420

C0NI99              	100.00%		Q8A414              	100.00%
Bootstrap support for C0NI99 as seed ortholog is 100%.
Bootstrap support for Q8A414 as seed ortholog is 100%.

Group of orthologs #34. Best score 418 bits
Score difference with first non-orthologous sequence - A.capsulata:83 B.thetaiotaomicron:418

C0NVF6              	100.00%		Q8A6B4              	100.00%
Bootstrap support for C0NVF6 as seed ortholog is 98%.
Bootstrap support for Q8A6B4 as seed ortholog is 100%.

Group of orthologs #35. Best score 417 bits
Score difference with first non-orthologous sequence - A.capsulata:417 B.thetaiotaomicron:417

C0NIM4              	100.00%		P94598              	100.00%
                    	       		Q8A6B2              	44.06%
Bootstrap support for C0NIM4 as seed ortholog is 100%.
Bootstrap support for P94598 as seed ortholog is 100%.

Group of orthologs #36. Best score 410 bits
Score difference with first non-orthologous sequence - A.capsulata:410 B.thetaiotaomicron:410

C0NDY9              	100.00%		Q8AA75              	100.00%
Bootstrap support for C0NDY9 as seed ortholog is 100%.
Bootstrap support for Q8AA75 as seed ortholog is 100%.

Group of orthologs #37. Best score 408 bits
Score difference with first non-orthologous sequence - A.capsulata:134 B.thetaiotaomicron:408

C0NGZ9              	100.00%		Q8AAP2              	100.00%
Bootstrap support for C0NGZ9 as seed ortholog is 99%.
Bootstrap support for Q8AAP2 as seed ortholog is 100%.

Group of orthologs #38. Best score 402 bits
Score difference with first non-orthologous sequence - A.capsulata:235 B.thetaiotaomicron:402

C0NU24              	100.00%		Q8A609              	100.00%
Bootstrap support for C0NU24 as seed ortholog is 99%.
Bootstrap support for Q8A609 as seed ortholog is 100%.

Group of orthologs #39. Best score 398 bits
Score difference with first non-orthologous sequence - A.capsulata:398 B.thetaiotaomicron:166

C0NAF8              	100.00%		Q8AAE7              	100.00%
Bootstrap support for C0NAF8 as seed ortholog is 100%.
Bootstrap support for Q8AAE7 as seed ortholog is 99%.

Group of orthologs #40. Best score 394 bits
Score difference with first non-orthologous sequence - A.capsulata:394 B.thetaiotaomicron:394

C0NAB0              	100.00%		Q89Z05              	100.00%
Bootstrap support for C0NAB0 as seed ortholog is 100%.
Bootstrap support for Q89Z05 as seed ortholog is 100%.

Group of orthologs #41. Best score 390 bits
Score difference with first non-orthologous sequence - A.capsulata:390 B.thetaiotaomicron:390

C0NDZ7              	100.00%		Q8A460              	100.00%
Bootstrap support for C0NDZ7 as seed ortholog is 100%.
Bootstrap support for Q8A460 as seed ortholog is 100%.

Group of orthologs #42. Best score 388 bits
Score difference with first non-orthologous sequence - A.capsulata:339 B.thetaiotaomicron:388

C0NLF6              	100.00%		Q8A9H8              	100.00%
Bootstrap support for C0NLF6 as seed ortholog is 100%.
Bootstrap support for Q8A9H8 as seed ortholog is 100%.

Group of orthologs #43. Best score 387 bits
Score difference with first non-orthologous sequence - A.capsulata:209 B.thetaiotaomicron:264

C0P0W0              	100.00%		Q8A422              	100.00%
Bootstrap support for C0P0W0 as seed ortholog is 99%.
Bootstrap support for Q8A422 as seed ortholog is 100%.

Group of orthologs #44. Best score 382 bits
Score difference with first non-orthologous sequence - A.capsulata:382 B.thetaiotaomicron:382

C0NJ74              	100.00%		Q8A2T6              	100.00%
Bootstrap support for C0NJ74 as seed ortholog is 100%.
Bootstrap support for Q8A2T6 as seed ortholog is 100%.

Group of orthologs #45. Best score 379 bits
Score difference with first non-orthologous sequence - A.capsulata:177 B.thetaiotaomicron:379

C0P079              	100.00%		Q8A555              	100.00%
Bootstrap support for C0P079 as seed ortholog is 99%.
Bootstrap support for Q8A555 as seed ortholog is 100%.

Group of orthologs #46. Best score 371 bits
Score difference with first non-orthologous sequence - A.capsulata:371 B.thetaiotaomicron:247

C0NAY3              	100.00%		Q8AAK6              	100.00%
Bootstrap support for C0NAY3 as seed ortholog is 100%.
Bootstrap support for Q8AAK6 as seed ortholog is 99%.

Group of orthologs #47. Best score 364 bits
Score difference with first non-orthologous sequence - A.capsulata:364 B.thetaiotaomicron:364

C0NGA8              	100.00%		Q8A2W2              	100.00%
Bootstrap support for C0NGA8 as seed ortholog is 100%.
Bootstrap support for Q8A2W2 as seed ortholog is 100%.

Group of orthologs #48. Best score 360 bits
Score difference with first non-orthologous sequence - A.capsulata:154 B.thetaiotaomicron:360

C0NI62              	100.00%		Q8A5W4              	100.00%
Bootstrap support for C0NI62 as seed ortholog is 99%.
Bootstrap support for Q8A5W4 as seed ortholog is 100%.

Group of orthologs #49. Best score 356 bits
Score difference with first non-orthologous sequence - A.capsulata:128 B.thetaiotaomicron:356

C0NX41              	100.00%		Q8A4M9              	100.00%
Bootstrap support for C0NX41 as seed ortholog is 99%.
Bootstrap support for Q8A4M9 as seed ortholog is 100%.

Group of orthologs #50. Best score 355 bits
Score difference with first non-orthologous sequence - A.capsulata:355 B.thetaiotaomicron:355

C0NQW8              	100.00%		Q8AAA9              	100.00%
Bootstrap support for C0NQW8 as seed ortholog is 100%.
Bootstrap support for Q8AAA9 as seed ortholog is 100%.

Group of orthologs #51. Best score 352 bits
Score difference with first non-orthologous sequence - A.capsulata:352 B.thetaiotaomicron:352

C0NJX7              	100.00%		Q8A8G2              	100.00%
Bootstrap support for C0NJX7 as seed ortholog is 100%.
Bootstrap support for Q8A8G2 as seed ortholog is 100%.

Group of orthologs #52. Best score 352 bits
Score difference with first non-orthologous sequence - A.capsulata:352 B.thetaiotaomicron:238

C0NSJ2              	100.00%		Q8AAD2              	100.00%
Bootstrap support for C0NSJ2 as seed ortholog is 100%.
Bootstrap support for Q8AAD2 as seed ortholog is 100%.

Group of orthologs #53. Best score 351 bits
Score difference with first non-orthologous sequence - A.capsulata:351 B.thetaiotaomicron:351

C0P0P7              	100.00%		Q8A3M1              	100.00%
C0NQQ8              	43.67%		
Bootstrap support for C0P0P7 as seed ortholog is 100%.
Bootstrap support for Q8A3M1 as seed ortholog is 100%.

Group of orthologs #54. Best score 345 bits
Score difference with first non-orthologous sequence - A.capsulata:345 B.thetaiotaomicron:345

C0NI02              	100.00%		Q8AAW5              	100.00%
Bootstrap support for C0NI02 as seed ortholog is 100%.
Bootstrap support for Q8AAW5 as seed ortholog is 100%.

Group of orthologs #55. Best score 342 bits
Score difference with first non-orthologous sequence - A.capsulata:91 B.thetaiotaomicron:342

C0NZT8              	100.00%		Q8A849              	100.00%
Bootstrap support for C0NZT8 as seed ortholog is 96%.
Bootstrap support for Q8A849 as seed ortholog is 100%.

Group of orthologs #56. Best score 336 bits
Score difference with first non-orthologous sequence - A.capsulata:336 B.thetaiotaomicron:336

C0NX78              	100.00%		Q8A2Q2              	100.00%
Bootstrap support for C0NX78 as seed ortholog is 100%.
Bootstrap support for Q8A2Q2 as seed ortholog is 100%.

Group of orthologs #57. Best score 334 bits
Score difference with first non-orthologous sequence - A.capsulata:334 B.thetaiotaomicron:334

C0NB69              	100.00%		Q8A028              	100.00%
Bootstrap support for C0NB69 as seed ortholog is 100%.
Bootstrap support for Q8A028 as seed ortholog is 100%.

Group of orthologs #58. Best score 333 bits
Score difference with first non-orthologous sequence - A.capsulata:145 B.thetaiotaomicron:333

C0NHC5              	100.00%		Q8A1B1              	100.00%
Bootstrap support for C0NHC5 as seed ortholog is 99%.
Bootstrap support for Q8A1B1 as seed ortholog is 100%.

Group of orthologs #59. Best score 332 bits
Score difference with first non-orthologous sequence - A.capsulata:332 B.thetaiotaomicron:332

C0NZR4              	100.00%		Q8A329              	100.00%
Bootstrap support for C0NZR4 as seed ortholog is 100%.
Bootstrap support for Q8A329 as seed ortholog is 100%.

Group of orthologs #60. Best score 329 bits
Score difference with first non-orthologous sequence - A.capsulata:255 B.thetaiotaomicron:329

C0NLW7              	100.00%		Q8A988              	100.00%
Bootstrap support for C0NLW7 as seed ortholog is 100%.
Bootstrap support for Q8A988 as seed ortholog is 100%.

Group of orthologs #61. Best score 328 bits
Score difference with first non-orthologous sequence - A.capsulata:328 B.thetaiotaomicron:328

C0NGC3              	100.00%		Q8A602              	100.00%
Bootstrap support for C0NGC3 as seed ortholog is 100%.
Bootstrap support for Q8A602 as seed ortholog is 100%.

Group of orthologs #62. Best score 328 bits
Score difference with first non-orthologous sequence - A.capsulata:328 B.thetaiotaomicron:328

C0NJB1              	100.00%		Q8A753              	100.00%
Bootstrap support for C0NJB1 as seed ortholog is 100%.
Bootstrap support for Q8A753 as seed ortholog is 100%.

Group of orthologs #63. Best score 327 bits
Score difference with first non-orthologous sequence - A.capsulata:327 B.thetaiotaomicron:327

C0NMB4              	100.00%		Q8A9S7              	100.00%
C0NGS5              	35.55%		
Bootstrap support for C0NMB4 as seed ortholog is 100%.
Bootstrap support for Q8A9S7 as seed ortholog is 100%.

Group of orthologs #64. Best score 323 bits
Score difference with first non-orthologous sequence - A.capsulata:23 B.thetaiotaomicron:95

C0NTN6              	100.00%		Q8A2K6              	100.00%
Bootstrap support for C0NTN6 as seed ortholog is 68%.
Alternative seed ortholog is C0NEI5 (23 bits away from this cluster)
Bootstrap support for Q8A2K6 as seed ortholog is 96%.

Group of orthologs #65. Best score 316 bits
Score difference with first non-orthologous sequence - A.capsulata:316 B.thetaiotaomicron:316

C0NR59              	100.00%		Q8A6U3              	100.00%
Bootstrap support for C0NR59 as seed ortholog is 100%.
Bootstrap support for Q8A6U3 as seed ortholog is 100%.

Group of orthologs #66. Best score 315 bits
Score difference with first non-orthologous sequence - A.capsulata:315 B.thetaiotaomicron:315

C0P038              	100.00%		Q8A094              	100.00%
Bootstrap support for C0P038 as seed ortholog is 100%.
Bootstrap support for Q8A094 as seed ortholog is 100%.

Group of orthologs #67. Best score 314 bits
Score difference with first non-orthologous sequence - A.capsulata:314 B.thetaiotaomicron:314

C0NL18              	100.00%		Q8A6N4              	100.00%
Bootstrap support for C0NL18 as seed ortholog is 100%.
Bootstrap support for Q8A6N4 as seed ortholog is 100%.

Group of orthologs #68. Best score 312 bits
Score difference with first non-orthologous sequence - A.capsulata:312 B.thetaiotaomicron:312

C0NBC7              	100.00%		Q8A126              	100.00%
Bootstrap support for C0NBC7 as seed ortholog is 100%.
Bootstrap support for Q8A126 as seed ortholog is 100%.

Group of orthologs #69. Best score 312 bits
Score difference with first non-orthologous sequence - A.capsulata:312 B.thetaiotaomicron:312

C0NLY4              	100.00%		Q8A2E7              	100.00%
Bootstrap support for C0NLY4 as seed ortholog is 100%.
Bootstrap support for Q8A2E7 as seed ortholog is 100%.

Group of orthologs #70. Best score 312 bits
Score difference with first non-orthologous sequence - A.capsulata:312 B.thetaiotaomicron:312

C0NT97              	100.00%		Q8A875              	100.00%
Bootstrap support for C0NT97 as seed ortholog is 100%.
Bootstrap support for Q8A875 as seed ortholog is 100%.

Group of orthologs #71. Best score 311 bits
Score difference with first non-orthologous sequence - A.capsulata:311 B.thetaiotaomicron:311

C0NBL4              	100.00%		Q8A608              	100.00%
C0NA31              	34.25%		
Bootstrap support for C0NBL4 as seed ortholog is 100%.
Bootstrap support for Q8A608 as seed ortholog is 100%.

Group of orthologs #72. Best score 309 bits
Score difference with first non-orthologous sequence - A.capsulata:309 B.thetaiotaomicron:253

C0NP68              	100.00%		Q8AA42              	100.00%
Bootstrap support for C0NP68 as seed ortholog is 100%.
Bootstrap support for Q8AA42 as seed ortholog is 100%.

Group of orthologs #73. Best score 306 bits
Score difference with first non-orthologous sequence - A.capsulata:306 B.thetaiotaomicron:306

C0NAS1              	100.00%		Q8A8E6              	100.00%
Bootstrap support for C0NAS1 as seed ortholog is 100%.
Bootstrap support for Q8A8E6 as seed ortholog is 100%.

Group of orthologs #74. Best score 303 bits
Score difference with first non-orthologous sequence - A.capsulata:303 B.thetaiotaomicron:303

C0NRH1              	100.00%		Q8A448              	100.00%
Bootstrap support for C0NRH1 as seed ortholog is 100%.
Bootstrap support for Q8A448 as seed ortholog is 100%.

Group of orthologs #75. Best score 302 bits
Score difference with first non-orthologous sequence - A.capsulata:302 B.thetaiotaomicron:302

C0NWC6              	100.00%		Q8A185              	100.00%
                    	       		Q8A4G7              	89.64%
                    	       		Q8A1Y0              	68.20%
Bootstrap support for C0NWC6 as seed ortholog is 100%.
Bootstrap support for Q8A185 as seed ortholog is 100%.

Group of orthologs #76. Best score 301 bits
Score difference with first non-orthologous sequence - A.capsulata:301 B.thetaiotaomicron:301

C0NJX0              	100.00%		Q8ABI5              	100.00%
Bootstrap support for C0NJX0 as seed ortholog is 100%.
Bootstrap support for Q8ABI5 as seed ortholog is 100%.

Group of orthologs #77. Best score 299 bits
Score difference with first non-orthologous sequence - A.capsulata:299 B.thetaiotaomicron:88

C0NRX5              	100.00%		Q8A2K5              	100.00%
C0NHQ1              	26.52%		Q8A2J1              	9.08%
C0NUB2              	19.37%		Q8A6U8              	7.15%
Bootstrap support for C0NRX5 as seed ortholog is 100%.
Bootstrap support for Q8A2K5 as seed ortholog is 92%.

Group of orthologs #78. Best score 298 bits
Score difference with first non-orthologous sequence - A.capsulata:298 B.thetaiotaomicron:298

C0NQY8              	100.00%		Q8A9M8              	100.00%
Bootstrap support for C0NQY8 as seed ortholog is 100%.
Bootstrap support for Q8A9M8 as seed ortholog is 100%.

Group of orthologs #79. Best score 297 bits
Score difference with first non-orthologous sequence - A.capsulata:297 B.thetaiotaomicron:297

C0NWY9              	100.00%		Q8A8K6              	100.00%
Bootstrap support for C0NWY9 as seed ortholog is 100%.
Bootstrap support for Q8A8K6 as seed ortholog is 100%.

Group of orthologs #80. Best score 293 bits
Score difference with first non-orthologous sequence - A.capsulata:9 B.thetaiotaomicron:293

C0NG18              	100.00%		Q8A334              	100.00%
Bootstrap support for C0NG18 as seed ortholog is 76%.
Bootstrap support for Q8A334 as seed ortholog is 100%.

Group of orthologs #81. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:189 B.thetaiotaomicron:287

C0NMK9              	100.00%		Q8A9E3              	100.00%
Bootstrap support for C0NMK9 as seed ortholog is 99%.
Bootstrap support for Q8A9E3 as seed ortholog is 100%.

Group of orthologs #82. Best score 285 bits
Score difference with first non-orthologous sequence - A.capsulata:128 B.thetaiotaomicron:85

C0NZD6              	100.00%		Q8A2W9              	100.00%
                    	       		Q8AB03              	39.00%
Bootstrap support for C0NZD6 as seed ortholog is 99%.
Bootstrap support for Q8A2W9 as seed ortholog is 98%.

Group of orthologs #83. Best score 283 bits
Score difference with first non-orthologous sequence - A.capsulata:283 B.thetaiotaomicron:56

C0P0M8              	100.00%		Q8A2L3              	100.00%
Bootstrap support for C0P0M8 as seed ortholog is 100%.
Bootstrap support for Q8A2L3 as seed ortholog is 80%.

Group of orthologs #84. Best score 280 bits
Score difference with first non-orthologous sequence - A.capsulata:280 B.thetaiotaomicron:280

C0NJH1              	100.00%		Q8A339              	100.00%
Bootstrap support for C0NJH1 as seed ortholog is 100%.
Bootstrap support for Q8A339 as seed ortholog is 100%.

Group of orthologs #85. Best score 280 bits
Score difference with first non-orthologous sequence - A.capsulata:280 B.thetaiotaomicron:280

C0NYR4              	100.00%		Q8A9M7              	100.00%
Bootstrap support for C0NYR4 as seed ortholog is 100%.
Bootstrap support for Q8A9M7 as seed ortholog is 100%.

Group of orthologs #86. Best score 277 bits
Score difference with first non-orthologous sequence - A.capsulata:277 B.thetaiotaomicron:277

C0P1G6              	100.00%		Q8A0G1              	100.00%
C0P1H4              	33.62%		
Bootstrap support for C0P1G6 as seed ortholog is 100%.
Bootstrap support for Q8A0G1 as seed ortholog is 100%.

Group of orthologs #87. Best score 277 bits
Score difference with first non-orthologous sequence - A.capsulata:277 B.thetaiotaomicron:277

C0NBP9              	100.00%		Q8A0F6              	100.00%
Bootstrap support for C0NBP9 as seed ortholog is 100%.
Bootstrap support for Q8A0F6 as seed ortholog is 100%.

Group of orthologs #88. Best score 275 bits
Score difference with first non-orthologous sequence - A.capsulata:7 B.thetaiotaomicron:48

C0NV39              	100.00%		Q8A6J6              	100.00%
Bootstrap support for C0NV39 as seed ortholog is 60%.
Alternative seed ortholog is C0NXA8 (7 bits away from this cluster)
Bootstrap support for Q8A6J6 as seed ortholog is 93%.

Group of orthologs #89. Best score 270 bits
Score difference with first non-orthologous sequence - A.capsulata:97 B.thetaiotaomicron:270

C0NLE3              	100.00%		Q8A3X0              	100.00%
                    	       		Q89ZV9              	31.57%
Bootstrap support for C0NLE3 as seed ortholog is 95%.
Bootstrap support for Q8A3X0 as seed ortholog is 100%.

Group of orthologs #90. Best score 269 bits
Score difference with first non-orthologous sequence - A.capsulata:93 B.thetaiotaomicron:60

C0NIG0              	100.00%		Q8A158              	100.00%
C0NDN3              	9.76%		Q8A651              	48.56%
Bootstrap support for C0NIG0 as seed ortholog is 92%.
Bootstrap support for Q8A158 as seed ortholog is 92%.

Group of orthologs #91. Best score 267 bits
Score difference with first non-orthologous sequence - A.capsulata:267 B.thetaiotaomicron:267

C0NZL8              	100.00%		Q8A470              	100.00%
C0NL49              	9.09%		
C0NEY2              	5.68%		
Bootstrap support for C0NZL8 as seed ortholog is 100%.
Bootstrap support for Q8A470 as seed ortholog is 100%.

Group of orthologs #92. Best score 263 bits
Score difference with first non-orthologous sequence - A.capsulata:263 B.thetaiotaomicron:53

C0NBI9              	100.00%		Q8AAF6              	100.00%
C0NV77              	13.97%		
C0NA48              	10.59%		
C0NH66              	7.33%		
Bootstrap support for C0NBI9 as seed ortholog is 100%.
Bootstrap support for Q8AAF6 as seed ortholog is 88%.

Group of orthologs #93. Best score 262 bits
Score difference with first non-orthologous sequence - A.capsulata:262 B.thetaiotaomicron:262

C0NX08              	100.00%		Q8A325              	100.00%
                    	       		Q8A0M7              	27.86%
                    	       		Q8A6K3              	25.43%
                    	       		Q8A193              	24.26%
                    	       		Q8A0Q8              	23.63%
                    	       		Q8A0N0              	21.36%
                    	       		Q8A0Q6              	20.74%
                    	       		Q8A1Y1              	11.27%
                    	       		Q8A0Q9              	10.80%
                    	       		Q8A5N9              	10.72%
                    	       		Q8A0N1              	10.49%
                    	       		Q8A3K6              	10.33%
                    	       		Q8A0E8              	10.09%
                    	       		Q8A182              	9.55%
                    	       		Q8A8Y5              	8.92%
                    	       		Q8A4H0              	8.76%
                    	       		Q8A0C9              	8.14%
                    	       		Q8A6V7              	6.89%
                    	       		Q8A113              	6.81%
                    	       		Q8A0C8              	5.63%
Bootstrap support for C0NX08 as seed ortholog is 100%.
Bootstrap support for Q8A325 as seed ortholog is 100%.

Group of orthologs #94. Best score 257 bits
Score difference with first non-orthologous sequence - A.capsulata:257 B.thetaiotaomicron:80

C0NY44              	100.00%		Q8A2B9              	100.00%
Bootstrap support for C0NY44 as seed ortholog is 100%.
Bootstrap support for Q8A2B9 as seed ortholog is 95%.

Group of orthologs #95. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:135 B.thetaiotaomicron:253

C0NMD6              	100.00%		Q8A6M5              	100.00%
                    	       		Q8A375              	51.66%
Bootstrap support for C0NMD6 as seed ortholog is 99%.
Bootstrap support for Q8A6M5 as seed ortholog is 100%.

Group of orthologs #96. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:180 B.thetaiotaomicron:253

C0NZD5              	100.00%		Q8A7H6              	100.00%
Bootstrap support for C0NZD5 as seed ortholog is 99%.
Bootstrap support for Q8A7H6 as seed ortholog is 100%.

Group of orthologs #97. Best score 248 bits
Score difference with first non-orthologous sequence - A.capsulata:248 B.thetaiotaomicron:248

C0NEM8              	100.00%		Q8A6M0              	100.00%
C0NYY5              	20.59%		
Bootstrap support for C0NEM8 as seed ortholog is 100%.
Bootstrap support for Q8A6M0 as seed ortholog is 100%.

Group of orthologs #98. Best score 246 bits
Score difference with first non-orthologous sequence - A.capsulata:246 B.thetaiotaomicron:246

C0NFP4              	100.00%		Q8A7T7              	100.00%
Bootstrap support for C0NFP4 as seed ortholog is 100%.
Bootstrap support for Q8A7T7 as seed ortholog is 100%.

Group of orthologs #99. Best score 244 bits
Score difference with first non-orthologous sequence - A.capsulata:244 B.thetaiotaomicron:244

C0NNN6              	100.00%		Q8A543              	100.00%
Bootstrap support for C0NNN6 as seed ortholog is 100%.
Bootstrap support for Q8A543 as seed ortholog is 100%.

Group of orthologs #100. Best score 243 bits
Score difference with first non-orthologous sequence - A.capsulata:243 B.thetaiotaomicron:243

C0NMS8              	100.00%		Q8A378              	100.00%
Bootstrap support for C0NMS8 as seed ortholog is 100%.
Bootstrap support for Q8A378 as seed ortholog is 100%.

Group of orthologs #101. Best score 243 bits
Score difference with first non-orthologous sequence - A.capsulata:129 B.thetaiotaomicron:243

C0NLI8              	100.00%		Q8A613              	100.00%
Bootstrap support for C0NLI8 as seed ortholog is 99%.
Bootstrap support for Q8A613 as seed ortholog is 100%.

Group of orthologs #102. Best score 242 bits
Score difference with first non-orthologous sequence - A.capsulata:75 B.thetaiotaomicron:242

C0NGQ6              	100.00%		Q8A0Z8              	100.00%
Bootstrap support for C0NGQ6 as seed ortholog is 94%.
Bootstrap support for Q8A0Z8 as seed ortholog is 100%.

Group of orthologs #103. Best score 240 bits
Score difference with first non-orthologous sequence - A.capsulata:240 B.thetaiotaomicron:240

C0NVN2              	100.00%		Q8A9I0              	100.00%
Bootstrap support for C0NVN2 as seed ortholog is 100%.
Bootstrap support for Q8A9I0 as seed ortholog is 100%.

Group of orthologs #104. Best score 239 bits
Score difference with first non-orthologous sequence - A.capsulata:239 B.thetaiotaomicron:239

C0NYL1              	100.00%		Q8A3W3              	100.00%
Bootstrap support for C0NYL1 as seed ortholog is 100%.
Bootstrap support for Q8A3W3 as seed ortholog is 100%.

Group of orthologs #105. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:238 B.thetaiotaomicron:238

C0NMF7              	100.00%		Q8A1E8              	100.00%
Bootstrap support for C0NMF7 as seed ortholog is 100%.
Bootstrap support for Q8A1E8 as seed ortholog is 100%.

Group of orthologs #106. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:164 B.thetaiotaomicron:34

C0NUQ9              	100.00%		Q8A2X1              	100.00%
Bootstrap support for C0NUQ9 as seed ortholog is 99%.
Bootstrap support for Q8A2X1 as seed ortholog is 72%.
Alternative seed ortholog is Q8A3A0 (34 bits away from this cluster)

Group of orthologs #107. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:238 B.thetaiotaomicron:238

C0NTA6              	100.00%		Q8A880              	100.00%
Bootstrap support for C0NTA6 as seed ortholog is 100%.
Bootstrap support for Q8A880 as seed ortholog is 100%.

Group of orthologs #108. Best score 237 bits
Score difference with first non-orthologous sequence - A.capsulata:237 B.thetaiotaomicron:165

C0NAM8              	100.00%		Q8A192              	100.00%
Bootstrap support for C0NAM8 as seed ortholog is 100%.
Bootstrap support for Q8A192 as seed ortholog is 99%.

Group of orthologs #109. Best score 236 bits
Score difference with first non-orthologous sequence - A.capsulata:81 B.thetaiotaomicron:236

C0NQG3              	100.00%		Q8A0X9              	100.00%
Bootstrap support for C0NQG3 as seed ortholog is 98%.
Bootstrap support for Q8A0X9 as seed ortholog is 100%.

Group of orthologs #110. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:235 B.thetaiotaomicron:144

C0NHA0              	100.00%		Q8AAD3              	100.00%
Bootstrap support for C0NHA0 as seed ortholog is 100%.
Bootstrap support for Q8AAD3 as seed ortholog is 99%.

Group of orthologs #111. Best score 234 bits
Score difference with first non-orthologous sequence - A.capsulata:234 B.thetaiotaomicron:234

C0NVN1              	100.00%		Q8A639              	100.00%
Bootstrap support for C0NVN1 as seed ortholog is 100%.
Bootstrap support for Q8A639 as seed ortholog is 100%.

Group of orthologs #112. Best score 233 bits
Score difference with first non-orthologous sequence - A.capsulata:233 B.thetaiotaomicron:100

C0NTR5              	100.00%		Q8A7C3              	100.00%
Bootstrap support for C0NTR5 as seed ortholog is 100%.
Bootstrap support for Q8A7C3 as seed ortholog is 99%.

Group of orthologs #113. Best score 231 bits
Score difference with first non-orthologous sequence - A.capsulata:37 B.thetaiotaomicron:231

C0P0H4              	100.00%		Q8A7S4              	100.00%
                    	       		Q8A739              	51.08%
                    	       		Q8A6G7              	50.19%
Bootstrap support for C0P0H4 as seed ortholog is 78%.
Bootstrap support for Q8A7S4 as seed ortholog is 100%.

Group of orthologs #114. Best score 230 bits
Score difference with first non-orthologous sequence - A.capsulata:230 B.thetaiotaomicron:230

C0NTF1              	100.00%		Q8AAD9              	100.00%
                    	       		Q8A540              	50.53%
Bootstrap support for C0NTF1 as seed ortholog is 100%.
Bootstrap support for Q8AAD9 as seed ortholog is 100%.

Group of orthologs #115. Best score 230 bits
Score difference with first non-orthologous sequence - A.capsulata:230 B.thetaiotaomicron:230

C0NWL7              	100.00%		Q8A455              	100.00%
Bootstrap support for C0NWL7 as seed ortholog is 100%.
Bootstrap support for Q8A455 as seed ortholog is 100%.

Group of orthologs #116. Best score 229 bits
Score difference with first non-orthologous sequence - A.capsulata:229 B.thetaiotaomicron:229

C0P1H0              	100.00%		Q8A0F7              	100.00%
C0P1F4              	88.22%		
Bootstrap support for C0P1H0 as seed ortholog is 100%.
Bootstrap support for Q8A0F7 as seed ortholog is 100%.

Group of orthologs #117. Best score 229 bits
Score difference with first non-orthologous sequence - A.capsulata:229 B.thetaiotaomicron:229

C0P081              	100.00%		Q8A128              	100.00%
Bootstrap support for C0P081 as seed ortholog is 100%.
Bootstrap support for Q8A128 as seed ortholog is 100%.

Group of orthologs #118. Best score 225 bits
Score difference with first non-orthologous sequence - A.capsulata:225 B.thetaiotaomicron:225

C0NZH2              	100.00%		Q89ZI2              	100.00%
Bootstrap support for C0NZH2 as seed ortholog is 100%.
Bootstrap support for Q89ZI2 as seed ortholog is 100%.

Group of orthologs #119. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:223 B.thetaiotaomicron:223

C0NJY6              	100.00%		Q8A9R7              	100.00%
C0NKX2              	15.69%		
Bootstrap support for C0NJY6 as seed ortholog is 100%.
Bootstrap support for Q8A9R7 as seed ortholog is 100%.

Group of orthologs #120. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:223 B.thetaiotaomicron:223

C0NE28              	100.00%		Q8A1P8              	100.00%
Bootstrap support for C0NE28 as seed ortholog is 100%.
Bootstrap support for Q8A1P8 as seed ortholog is 100%.

Group of orthologs #121. Best score 222 bits
Score difference with first non-orthologous sequence - A.capsulata:222 B.thetaiotaomicron:170

C0NL35              	100.00%		Q8ABA8              	100.00%
Bootstrap support for C0NL35 as seed ortholog is 100%.
Bootstrap support for Q8ABA8 as seed ortholog is 99%.

Group of orthologs #122. Best score 222 bits
Score difference with first non-orthologous sequence - A.capsulata:222 B.thetaiotaomicron:222

C0NSJ0              	100.00%		Q8A876              	100.00%
Bootstrap support for C0NSJ0 as seed ortholog is 100%.
Bootstrap support for Q8A876 as seed ortholog is 100%.

Group of orthologs #123. Best score 221 bits
Score difference with first non-orthologous sequence - A.capsulata:221 B.thetaiotaomicron:221

C0NL76              	100.00%		Q8A156              	100.00%
Bootstrap support for C0NL76 as seed ortholog is 100%.
Bootstrap support for Q8A156 as seed ortholog is 100%.

Group of orthologs #124. Best score 221 bits
Score difference with first non-orthologous sequence - A.capsulata:221 B.thetaiotaomicron:221

C0NXP6              	100.00%		Q8A029              	100.00%
Bootstrap support for C0NXP6 as seed ortholog is 100%.
Bootstrap support for Q8A029 as seed ortholog is 100%.

Group of orthologs #125. Best score 220 bits
Score difference with first non-orthologous sequence - A.capsulata:220 B.thetaiotaomicron:220

C0NN35              	100.00%		Q8A6N7              	100.00%
Bootstrap support for C0NN35 as seed ortholog is 100%.
Bootstrap support for Q8A6N7 as seed ortholog is 100%.

Group of orthologs #126. Best score 220 bits
Score difference with first non-orthologous sequence - A.capsulata:133 B.thetaiotaomicron:133

C0NNY6              	100.00%		Q8AAQ5              	100.00%
Bootstrap support for C0NNY6 as seed ortholog is 99%.
Bootstrap support for Q8AAQ5 as seed ortholog is 99%.

Group of orthologs #127. Best score 219 bits
Score difference with first non-orthologous sequence - A.capsulata:219 B.thetaiotaomicron:219

C0NB61              	100.00%		Q8A469              	100.00%
C0P0A1              	17.09%		
C0NSE6              	6.65%		
Bootstrap support for C0NB61 as seed ortholog is 100%.
Bootstrap support for Q8A469 as seed ortholog is 100%.

Group of orthologs #128. Best score 218 bits
Score difference with first non-orthologous sequence - A.capsulata:218 B.thetaiotaomicron:218

C0NZA7              	100.00%		Q8A601              	100.00%
Bootstrap support for C0NZA7 as seed ortholog is 100%.
Bootstrap support for Q8A601 as seed ortholog is 100%.

Group of orthologs #129. Best score 217 bits
Score difference with first non-orthologous sequence - A.capsulata:28 B.thetaiotaomicron:217

C0NLF5              	100.00%		Q8A8C3              	100.00%
Bootstrap support for C0NLF5 as seed ortholog is 63%.
Alternative seed ortholog is C0NC93 (28 bits away from this cluster)
Bootstrap support for Q8A8C3 as seed ortholog is 100%.

Group of orthologs #130. Best score 216 bits
Score difference with first non-orthologous sequence - A.capsulata:216 B.thetaiotaomicron:216

C0NTW5              	100.00%		Q8A2F4              	100.00%
Bootstrap support for C0NTW5 as seed ortholog is 100%.
Bootstrap support for Q8A2F4 as seed ortholog is 100%.

Group of orthologs #131. Best score 215 bits
Score difference with first non-orthologous sequence - A.capsulata:121 B.thetaiotaomicron:103

C0P0N3              	100.00%		Q8AA78              	100.00%
Bootstrap support for C0P0N3 as seed ortholog is 98%.
Bootstrap support for Q8AA78 as seed ortholog is 99%.

Group of orthologs #132. Best score 212 bits
Score difference with first non-orthologous sequence - A.capsulata:212 B.thetaiotaomicron:120

C0NLE4              	100.00%		Q89ZA4              	100.00%
Bootstrap support for C0NLE4 as seed ortholog is 100%.
Bootstrap support for Q89ZA4 as seed ortholog is 99%.

Group of orthologs #133. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:211 B.thetaiotaomicron:211

C0NR36              	100.00%		Q8A2F2              	100.00%
Bootstrap support for C0NR36 as seed ortholog is 100%.
Bootstrap support for Q8A2F2 as seed ortholog is 100%.

Group of orthologs #134. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:211 B.thetaiotaomicron:211

C0NS59              	100.00%		Q8A9W7              	100.00%
Bootstrap support for C0NS59 as seed ortholog is 100%.
Bootstrap support for Q8A9W7 as seed ortholog is 100%.

Group of orthologs #135. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:208 B.thetaiotaomicron:63

C0NXN7              	100.00%		Q8AA27              	100.00%
Bootstrap support for C0NXN7 as seed ortholog is 100%.
Bootstrap support for Q8AA27 as seed ortholog is 97%.

Group of orthologs #136. Best score 207 bits
Score difference with first non-orthologous sequence - A.capsulata:66 B.thetaiotaomicron:118

C0NHQ4              	100.00%		Q89Z65              	100.00%
Bootstrap support for C0NHQ4 as seed ortholog is 95%.
Bootstrap support for Q89Z65 as seed ortholog is 99%.

Group of orthologs #137. Best score 205 bits
Score difference with first non-orthologous sequence - A.capsulata:205 B.thetaiotaomicron:205

C0NKS4              	100.00%		Q8A229              	100.00%
                    	       		Q8A1Z6              	63.56%
                    	       		Q8A1Y2              	42.11%
                    	       		Q8A1W2              	28.62%
Bootstrap support for C0NKS4 as seed ortholog is 100%.
Bootstrap support for Q8A229 as seed ortholog is 100%.

Group of orthologs #138. Best score 205 bits
Score difference with first non-orthologous sequence - A.capsulata:135 B.thetaiotaomicron:205

C0NIU6              	100.00%		Q8A127              	100.00%
                    	       		Q8A6M9              	19.11%
                    	       		Q8A0T3              	9.60%
Bootstrap support for C0NIU6 as seed ortholog is 99%.
Bootstrap support for Q8A127 as seed ortholog is 100%.

Group of orthologs #139. Best score 202 bits
Score difference with first non-orthologous sequence - A.capsulata:158 B.thetaiotaomicron:202

C0P0G2              	100.00%		Q8A6K0              	100.00%
Bootstrap support for C0P0G2 as seed ortholog is 99%.
Bootstrap support for Q8A6K0 as seed ortholog is 100%.

Group of orthologs #140. Best score 200 bits
Score difference with first non-orthologous sequence - A.capsulata:200 B.thetaiotaomicron:200

C0NL12              	100.00%		Q89ZI9              	100.00%
Bootstrap support for C0NL12 as seed ortholog is 100%.
Bootstrap support for Q89ZI9 as seed ortholog is 100%.

Group of orthologs #141. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:198 B.thetaiotaomicron:198

C0NF87              	100.00%		Q8A1X7              	100.00%
Bootstrap support for C0NF87 as seed ortholog is 100%.
Bootstrap support for Q8A1X7 as seed ortholog is 100%.

Group of orthologs #142. Best score 197 bits
Score difference with first non-orthologous sequence - A.capsulata:197 B.thetaiotaomicron:197

C0NLK4              	100.00%		Q8A7J8              	100.00%
Bootstrap support for C0NLK4 as seed ortholog is 100%.
Bootstrap support for Q8A7J8 as seed ortholog is 100%.

Group of orthologs #143. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:43 B.thetaiotaomicron:196

C0NIF9              	100.00%		Q8AAM8              	100.00%
                    	       		Q8A1Q3              	86.81%
Bootstrap support for C0NIF9 as seed ortholog is 80%.
Bootstrap support for Q8AAM8 as seed ortholog is 100%.

Group of orthologs #144. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:38 B.thetaiotaomicron:195

C0NQX0              	100.00%		Q8A803              	100.00%
Bootstrap support for C0NQX0 as seed ortholog is 83%.
Bootstrap support for Q8A803 as seed ortholog is 100%.

Group of orthologs #145. Best score 193 bits
Score difference with first non-orthologous sequence - A.capsulata:38 B.thetaiotaomicron:193

C0NF83              	100.00%		Q8A9M1              	100.00%
C0NVF3              	54.29%		
Bootstrap support for C0NF83 as seed ortholog is 77%.
Bootstrap support for Q8A9M1 as seed ortholog is 100%.

Group of orthologs #146. Best score 193 bits
Score difference with first non-orthologous sequence - A.capsulata:193 B.thetaiotaomicron:193

C0P1F5              	100.00%		Q8A0G2              	100.00%
C0P1H1              	55.80%		
Bootstrap support for C0P1F5 as seed ortholog is 100%.
Bootstrap support for Q8A0G2 as seed ortholog is 100%.

Group of orthologs #147. Best score 193 bits
Score difference with first non-orthologous sequence - A.capsulata:40 B.thetaiotaomicron:193

C0NZ91              	100.00%		Q8AB01              	100.00%
Bootstrap support for C0NZ91 as seed ortholog is 96%.
Bootstrap support for Q8AB01 as seed ortholog is 100%.

Group of orthologs #148. Best score 192 bits
Score difference with first non-orthologous sequence - A.capsulata:192 B.thetaiotaomicron:192

C0NY58              	100.00%		Q8A2B3              	100.00%
Bootstrap support for C0NY58 as seed ortholog is 100%.
Bootstrap support for Q8A2B3 as seed ortholog is 100%.

Group of orthologs #149. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:97 B.thetaiotaomicron:50

C0NX06              	100.00%		Q8A1V8              	100.00%
C0P008              	44.32%		
Bootstrap support for C0NX06 as seed ortholog is 97%.
Bootstrap support for Q8A1V8 as seed ortholog is 82%.

Group of orthologs #150. Best score 189 bits
Score difference with first non-orthologous sequence - A.capsulata:189 B.thetaiotaomicron:189

C0NQ40              	100.00%		Q8A004              	100.00%
Bootstrap support for C0NQ40 as seed ortholog is 100%.
Bootstrap support for Q8A004 as seed ortholog is 100%.

Group of orthologs #151. Best score 187 bits
Score difference with first non-orthologous sequence - A.capsulata:187 B.thetaiotaomicron:187

C0NXL8              	100.00%		Q8A1D3              	100.00%
Bootstrap support for C0NXL8 as seed ortholog is 100%.
Bootstrap support for Q8A1D3 as seed ortholog is 100%.

Group of orthologs #152. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 B.thetaiotaomicron:185

C0NEU3              	100.00%		Q8A103              	100.00%
Bootstrap support for C0NEU3 as seed ortholog is 100%.
Bootstrap support for Q8A103 as seed ortholog is 100%.

Group of orthologs #153. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 B.thetaiotaomicron:117

C0NW27              	100.00%		Q8A1G8              	100.00%
Bootstrap support for C0NW27 as seed ortholog is 100%.
Bootstrap support for Q8A1G8 as seed ortholog is 99%.

Group of orthologs #154. Best score 182 bits
Score difference with first non-orthologous sequence - A.capsulata:86 B.thetaiotaomicron:182

C0NJK5              	100.00%		Q8A479              	100.00%
Bootstrap support for C0NJK5 as seed ortholog is 98%.
Bootstrap support for Q8A479 as seed ortholog is 100%.

Group of orthologs #155. Best score 182 bits
Score difference with first non-orthologous sequence - A.capsulata:182 B.thetaiotaomicron:182

C0NXA7              	100.00%		Q8A9M5              	100.00%
Bootstrap support for C0NXA7 as seed ortholog is 100%.
Bootstrap support for Q8A9M5 as seed ortholog is 100%.

Group of orthologs #156. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 B.thetaiotaomicron:181

C0NIX9              	100.00%		Q8A011              	100.00%
                    	       		Q8A1V6              	6.31%
Bootstrap support for C0NIX9 as seed ortholog is 100%.
Bootstrap support for Q8A011 as seed ortholog is 100%.

Group of orthologs #157. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:24 B.thetaiotaomicron:180

C0NDF1              	100.00%		Q89ZI0              	100.00%
C0NUX0              	27.42%		
C0NRA2              	26.04%		
Bootstrap support for C0NDF1 as seed ortholog is 70%.
Alternative seed ortholog is C0NNA4 (24 bits away from this cluster)
Bootstrap support for Q89ZI0 as seed ortholog is 100%.

Group of orthologs #158. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:90 B.thetaiotaomicron:180

C0NE91              	100.00%		Q89ZR4              	100.00%
Bootstrap support for C0NE91 as seed ortholog is 97%.
Bootstrap support for Q89ZR4 as seed ortholog is 100%.

Group of orthologs #159. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:22 B.thetaiotaomicron:180

C0NRY9              	100.00%		Q8A0X6              	100.00%
Bootstrap support for C0NRY9 as seed ortholog is 75%.
Bootstrap support for Q8A0X6 as seed ortholog is 100%.

Group of orthologs #160. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:83 B.thetaiotaomicron:24

C0NXH6              	100.00%		Q8A1A8              	100.00%
Bootstrap support for C0NXH6 as seed ortholog is 96%.
Bootstrap support for Q8A1A8 as seed ortholog is 71%.
Alternative seed ortholog is Q8A7T2 (24 bits away from this cluster)

Group of orthologs #161. Best score 179 bits
Score difference with first non-orthologous sequence - A.capsulata:179 B.thetaiotaomicron:66

C0NYY8              	100.00%		Q8A1I6              	100.00%
Bootstrap support for C0NYY8 as seed ortholog is 100%.
Bootstrap support for Q8A1I6 as seed ortholog is 92%.

Group of orthologs #162. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:25 B.thetaiotaomicron:178

C0NBL0              	100.00%		Q8A7Z1              	100.00%
Bootstrap support for C0NBL0 as seed ortholog is 76%.
Bootstrap support for Q8A7Z1 as seed ortholog is 100%.

Group of orthologs #163. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:26 B.thetaiotaomicron:107

C0NTU3              	100.00%		Q8A7G9              	100.00%
Bootstrap support for C0NTU3 as seed ortholog is 81%.
Bootstrap support for Q8A7G9 as seed ortholog is 99%.

Group of orthologs #164. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:176 B.thetaiotaomicron:176

C0NMG3              	100.00%		Q8A0F5              	100.00%
C0NA22              	29.15%		
Bootstrap support for C0NMG3 as seed ortholog is 100%.
Bootstrap support for Q8A0F5 as seed ortholog is 100%.

Group of orthologs #165. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:176 B.thetaiotaomicron:176

C0NEA3              	100.00%		Q8A9I3              	100.00%
Bootstrap support for C0NEA3 as seed ortholog is 100%.
Bootstrap support for Q8A9I3 as seed ortholog is 100%.

Group of orthologs #166. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:176 B.thetaiotaomicron:176

C0NUM5              	100.00%		Q8A2S5              	100.00%
Bootstrap support for C0NUM5 as seed ortholog is 100%.
Bootstrap support for Q8A2S5 as seed ortholog is 100%.

Group of orthologs #167. Best score 174 bits
Score difference with first non-orthologous sequence - A.capsulata:174 B.thetaiotaomicron:174

C0NFA5              	100.00%		Q8A091              	100.00%
                    	       		Q8A9U4              	18.76%
Bootstrap support for C0NFA5 as seed ortholog is 100%.
Bootstrap support for Q8A091 as seed ortholog is 100%.

Group of orthologs #168. Best score 174 bits
Score difference with first non-orthologous sequence - A.capsulata:174 B.thetaiotaomicron:174

C0ND88              	100.00%		Q8A3X5              	100.00%
C0ND66              	42.79%		
Bootstrap support for C0ND88 as seed ortholog is 100%.
Bootstrap support for Q8A3X5 as seed ortholog is 100%.

Group of orthologs #169. Best score 172 bits
Score difference with first non-orthologous sequence - A.capsulata:172 B.thetaiotaomicron:172

P40911              	100.00%		Q8AAP9              	100.00%
C0NRY6              	13.61%		
Bootstrap support for P40911 as seed ortholog is 100%.
Bootstrap support for Q8AAP9 as seed ortholog is 100%.

Group of orthologs #170. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:171 B.thetaiotaomicron:171

C0NNK4              	100.00%		Q8A615              	100.00%
C0P137              	23.51%		
Bootstrap support for C0NNK4 as seed ortholog is 100%.
Bootstrap support for Q8A615 as seed ortholog is 100%.

Group of orthologs #171. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:170 B.thetaiotaomicron:170

C0NVY5              	100.00%		Q8A6H1              	100.00%
Bootstrap support for C0NVY5 as seed ortholog is 100%.
Bootstrap support for Q8A6H1 as seed ortholog is 100%.

Group of orthologs #172. Best score 169 bits
Score difference with first non-orthologous sequence - A.capsulata:169 B.thetaiotaomicron:169

C0NJU4              	100.00%		Q8A1E0              	100.00%
Bootstrap support for C0NJU4 as seed ortholog is 100%.
Bootstrap support for Q8A1E0 as seed ortholog is 100%.

Group of orthologs #173. Best score 169 bits
Score difference with first non-orthologous sequence - A.capsulata:45 B.thetaiotaomicron:169

C0NI45              	100.00%		Q8A7T1              	100.00%
Bootstrap support for C0NI45 as seed ortholog is 87%.
Bootstrap support for Q8A7T1 as seed ortholog is 100%.

Group of orthologs #174. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:92 B.thetaiotaomicron:168

C0NIF0              	100.00%		Q8A4S5              	100.00%
C0NF18              	19.56%		
Bootstrap support for C0NIF0 as seed ortholog is 97%.
Bootstrap support for Q8A4S5 as seed ortholog is 100%.

Group of orthologs #175. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 B.thetaiotaomicron:166

C0NKA0              	100.00%		Q8AAQ1              	100.00%
Bootstrap support for C0NKA0 as seed ortholog is 100%.
Bootstrap support for Q8AAQ1 as seed ortholog is 100%.

Group of orthologs #176. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 B.thetaiotaomicron:166

C0P1G7              	100.00%		Q8A0G3              	100.00%
Bootstrap support for C0P1G7 as seed ortholog is 100%.
Bootstrap support for Q8A0G3 as seed ortholog is 100%.

Group of orthologs #177. Best score 165 bits
Score difference with first non-orthologous sequence - A.capsulata:165 B.thetaiotaomicron:165

C0NSM2              	100.00%		Q8A6G9              	100.00%
C0NAG1              	5.11%		Q8A7S5              	41.78%
Bootstrap support for C0NSM2 as seed ortholog is 100%.
Bootstrap support for Q8A6G9 as seed ortholog is 100%.

Group of orthologs #178. Best score 164 bits
Score difference with first non-orthologous sequence - A.capsulata:164 B.thetaiotaomicron:164

C0NFD3              	100.00%		Q8A0U2              	100.00%
Bootstrap support for C0NFD3 as seed ortholog is 100%.
Bootstrap support for Q8A0U2 as seed ortholog is 100%.

Group of orthologs #179. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:163 B.thetaiotaomicron:163

C0NP15              	100.00%		Q89ZR8              	100.00%
Bootstrap support for C0NP15 as seed ortholog is 100%.
Bootstrap support for Q89ZR8 as seed ortholog is 100%.

Group of orthologs #180. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:52 B.thetaiotaomicron:163

C0NSX0              	100.00%		Q8A763              	100.00%
Bootstrap support for C0NSX0 as seed ortholog is 89%.
Bootstrap support for Q8A763 as seed ortholog is 100%.

Group of orthologs #181. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 B.thetaiotaomicron:161

C0NAK3              	100.00%		Q8A129              	100.00%
Bootstrap support for C0NAK3 as seed ortholog is 100%.
Bootstrap support for Q8A129 as seed ortholog is 100%.

Group of orthologs #182. Best score 160 bits
Score difference with first non-orthologous sequence - A.capsulata:160 B.thetaiotaomicron:160

C0P1A0              	100.00%		Q8A8L4              	100.00%
Bootstrap support for C0P1A0 as seed ortholog is 100%.
Bootstrap support for Q8A8L4 as seed ortholog is 100%.

Group of orthologs #183. Best score 159 bits
Score difference with first non-orthologous sequence - A.capsulata:159 B.thetaiotaomicron:159

C0NEA5              	100.00%		Q89YZ6              	100.00%
Bootstrap support for C0NEA5 as seed ortholog is 100%.
Bootstrap support for Q89YZ6 as seed ortholog is 100%.

Group of orthologs #184. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:158 B.thetaiotaomicron:15

C0NZ33              	100.00%		Q89YS5              	100.00%
                    	       		Q8A797              	39.70%
                    	       		Q8A2X8              	38.61%
                    	       		Q8A3A3              	18.51%
Bootstrap support for C0NZ33 as seed ortholog is 100%.
Bootstrap support for Q89YS5 as seed ortholog is 61%.
Alternative seed ortholog is Q8A6G6 (15 bits away from this cluster)

Group of orthologs #185. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:91 B.thetaiotaomicron:95

C0NEW1              	100.00%		Q8A2J7              	100.00%
C0NXY3              	5.51%		
Bootstrap support for C0NEW1 as seed ortholog is 99%.
Bootstrap support for Q8A2J7 as seed ortholog is 99%.

Group of orthologs #186. Best score 157 bits
Score difference with first non-orthologous sequence - A.capsulata:157 B.thetaiotaomicron:157

C0NAP7              	100.00%		Q8AAG6              	100.00%
C0NGJ3              	5.68%		
Bootstrap support for C0NAP7 as seed ortholog is 100%.
Bootstrap support for Q8AAG6 as seed ortholog is 100%.

Group of orthologs #187. Best score 157 bits
Score difference with first non-orthologous sequence - A.capsulata:21 B.thetaiotaomicron:70

C0NU38              	100.00%		Q8A195              	100.00%
Bootstrap support for C0NU38 as seed ortholog is 70%.
Alternative seed ortholog is C0NPK8 (21 bits away from this cluster)
Bootstrap support for Q8A195 as seed ortholog is 96%.

Group of orthologs #188. Best score 157 bits
Score difference with first non-orthologous sequence - A.capsulata:157 B.thetaiotaomicron:157

C0NW02              	100.00%		Q89ZG8              	100.00%
Bootstrap support for C0NW02 as seed ortholog is 100%.
Bootstrap support for Q89ZG8 as seed ortholog is 100%.

Group of orthologs #189. Best score 156 bits
Score difference with first non-orthologous sequence - A.capsulata:107 B.thetaiotaomicron:72

C0NJB8              	100.00%		Q8A8Q2              	100.00%
Bootstrap support for C0NJB8 as seed ortholog is 99%.
Bootstrap support for Q8A8Q2 as seed ortholog is 97%.

Group of orthologs #190. Best score 156 bits
Score difference with first non-orthologous sequence - A.capsulata:15 B.thetaiotaomicron:156

C0NR51              	100.00%		Q8A6R4              	100.00%
Bootstrap support for C0NR51 as seed ortholog is 32%.
Alternative seed ortholog is C0NC93 (15 bits away from this cluster)
Bootstrap support for Q8A6R4 as seed ortholog is 100%.

Group of orthologs #191. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 B.thetaiotaomicron:155

C0NHB9              	100.00%		Q8A528              	100.00%
Bootstrap support for C0NHB9 as seed ortholog is 100%.
Bootstrap support for Q8A528 as seed ortholog is 100%.

Group of orthologs #192. Best score 153 bits
Score difference with first non-orthologous sequence - A.capsulata:153 B.thetaiotaomicron:153

C0NIH0              	100.00%		Q8A6N1              	100.00%
Bootstrap support for C0NIH0 as seed ortholog is 100%.
Bootstrap support for Q8A6N1 as seed ortholog is 100%.

Group of orthologs #193. Best score 152 bits
Score difference with first non-orthologous sequence - A.capsulata:152 B.thetaiotaomicron:152

C0NID5              	100.00%		Q8A476              	100.00%
Bootstrap support for C0NID5 as seed ortholog is 100%.
Bootstrap support for Q8A476 as seed ortholog is 100%.

Group of orthologs #194. Best score 151 bits
Score difference with first non-orthologous sequence - A.capsulata:151 B.thetaiotaomicron:151

C0NMD9              	100.00%		Q8A1E7              	100.00%
Bootstrap support for C0NMD9 as seed ortholog is 100%.
Bootstrap support for Q8A1E7 as seed ortholog is 100%.

Group of orthologs #195. Best score 150 bits
Score difference with first non-orthologous sequence - A.capsulata:150 B.thetaiotaomicron:150

C0NFL8              	100.00%		Q8A2U2              	100.00%
Bootstrap support for C0NFL8 as seed ortholog is 100%.
Bootstrap support for Q8A2U2 as seed ortholog is 100%.

Group of orthologs #196. Best score 149 bits
Score difference with first non-orthologous sequence - A.capsulata:78 B.thetaiotaomicron:149

C0NP79              	100.00%		Q8A7I7              	100.00%
C0NY00              	100.00%		
C0NER5              	6.53%		
Bootstrap support for C0NP79 as seed ortholog is 95%.
Bootstrap support for C0NY00 as seed ortholog is 95%.
Bootstrap support for Q8A7I7 as seed ortholog is 100%.

Group of orthologs #197. Best score 146 bits
Score difference with first non-orthologous sequence - A.capsulata:146 B.thetaiotaomicron:146

C0NSU2              	100.00%		Q8AAK5              	100.00%
C0NSG3              	6.35%		Q8A8W6              	59.33%
                    	       		Q89ZN9              	25.95%
                    	       		Q8AAK4              	22.97%
                    	       		Q8A798              	19.01%
                    	       		Q8A2X7              	18.81%
                    	       		Q8AAF9              	17.49%
                    	       		Q89ZI3              	15.27%
                    	       		Q8A1R1              	10.20%
                    	       		Q8A4Y8              	9.37%
                    	       		Q89YQ0              	8.61%
                    	       		Q8A7A4              	7.98%
Bootstrap support for C0NSU2 as seed ortholog is 100%.
Bootstrap support for Q8AAK5 as seed ortholog is 100%.

Group of orthologs #198. Best score 146 bits
Score difference with first non-orthologous sequence - A.capsulata:97 B.thetaiotaomicron:146

C0NJR1              	100.00%		Q8AA10              	100.00%
C0NJ49              	13.29%		
Bootstrap support for C0NJR1 as seed ortholog is 99%.
Bootstrap support for Q8AA10 as seed ortholog is 100%.

Group of orthologs #199. Best score 146 bits
Score difference with first non-orthologous sequence - A.capsulata:146 B.thetaiotaomicron:146

C0NL77              	100.00%		Q8A1A6              	100.00%
Bootstrap support for C0NL77 as seed ortholog is 100%.
Bootstrap support for Q8A1A6 as seed ortholog is 100%.

Group of orthologs #200. Best score 145 bits
Score difference with first non-orthologous sequence - A.capsulata:145 B.thetaiotaomicron:145

C0NZQ5              	100.00%		Q89Z26              	100.00%
Bootstrap support for C0NZQ5 as seed ortholog is 100%.
Bootstrap support for Q89Z26 as seed ortholog is 100%.

Group of orthologs #201. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 B.thetaiotaomicron:144

C0NI23              	100.00%		Q8A0Q0              	100.00%
Bootstrap support for C0NI23 as seed ortholog is 100%.
Bootstrap support for Q8A0Q0 as seed ortholog is 100%.

Group of orthologs #202. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:89 B.thetaiotaomicron:144

C0NGU1              	100.00%		Q8AB61              	100.00%
Bootstrap support for C0NGU1 as seed ortholog is 98%.
Bootstrap support for Q8AB61 as seed ortholog is 100%.

Group of orthologs #203. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:71 B.thetaiotaomicron:144

C0NS50              	100.00%		Q8A3H9              	100.00%
Bootstrap support for C0NS50 as seed ortholog is 98%.
Bootstrap support for Q8A3H9 as seed ortholog is 100%.

Group of orthologs #204. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 B.thetaiotaomicron:144

C0NWV6              	100.00%		Q8ABB0              	100.00%
Bootstrap support for C0NWV6 as seed ortholog is 100%.
Bootstrap support for Q8ABB0 as seed ortholog is 100%.

Group of orthologs #205. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:24 B.thetaiotaomicron:143

C0NMX2              	100.00%		Q8A6L6              	100.00%
                    	       		Q8A6L9              	5.74%
Bootstrap support for C0NMX2 as seed ortholog is 71%.
Alternative seed ortholog is C0NF36 (24 bits away from this cluster)
Bootstrap support for Q8A6L6 as seed ortholog is 100%.

Group of orthologs #206. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:36 B.thetaiotaomicron:68

C0NIB8              	100.00%		Q8A199              	100.00%
Bootstrap support for C0NIB8 as seed ortholog is 82%.
Bootstrap support for Q8A199 as seed ortholog is 95%.

Group of orthologs #207. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:90 B.thetaiotaomicron:61

C0NU34              	100.00%		Q8AB60              	100.00%
Bootstrap support for C0NU34 as seed ortholog is 99%.
Bootstrap support for Q8AB60 as seed ortholog is 96%.

Group of orthologs #208. Best score 140 bits
Score difference with first non-orthologous sequence - A.capsulata:51 B.thetaiotaomicron:140

C0P0H5              	100.00%		Q8A6S0              	100.00%
C0NF10              	8.51%		
Bootstrap support for C0P0H5 as seed ortholog is 92%.
Bootstrap support for Q8A6S0 as seed ortholog is 100%.

Group of orthologs #209. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:22 B.thetaiotaomicron:68

C0NCF6              	100.00%		Q8A1P2              	100.00%
Bootstrap support for C0NCF6 as seed ortholog is 72%.
Alternative seed ortholog is C0NAY4 (22 bits away from this cluster)
Bootstrap support for Q8A1P2 as seed ortholog is 95%.

Group of orthologs #210. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 B.thetaiotaomicron:63

C0NXQ1              	100.00%		Q89ZF2              	100.00%
Bootstrap support for C0NXQ1 as seed ortholog is 100%.
Bootstrap support for Q89ZF2 as seed ortholog is 98%.

Group of orthologs #211. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 B.thetaiotaomicron:139

C0NQK4              	100.00%		Q8A7Z6              	100.00%
Bootstrap support for C0NQK4 as seed ortholog is 100%.
Bootstrap support for Q8A7Z6 as seed ortholog is 100%.

Group of orthologs #212. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:12 B.thetaiotaomicron:138

C0NGP7              	100.00%		Q8AAA3              	100.00%
C0NAR9              	6.24%		
C0NXX2              	6.24%		
Bootstrap support for C0NGP7 as seed ortholog is 62%.
Alternative seed ortholog is C0NII4 (12 bits away from this cluster)
Bootstrap support for Q8AAA3 as seed ortholog is 100%.

Group of orthologs #213. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 B.thetaiotaomicron:138

C0ND48              	100.00%		Q8A6S1              	100.00%
Bootstrap support for C0ND48 as seed ortholog is 100%.
Bootstrap support for Q8A6S1 as seed ortholog is 100%.

Group of orthologs #214. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:56 B.thetaiotaomicron:47

C0NQG0              	100.00%		Q8A945              	100.00%
Bootstrap support for C0NQG0 as seed ortholog is 98%.
Bootstrap support for Q8A945 as seed ortholog is 96%.

Group of orthologs #215. Best score 136 bits
Score difference with first non-orthologous sequence - A.capsulata:136 B.thetaiotaomicron:136

C0NCL3              	100.00%		Q8AAC1              	100.00%
Bootstrap support for C0NCL3 as seed ortholog is 100%.
Bootstrap support for Q8AAC1 as seed ortholog is 100%.

Group of orthologs #216. Best score 135 bits
Score difference with first non-orthologous sequence - A.capsulata:135 B.thetaiotaomicron:135

C0NE81              	100.00%		Q8A7Z9              	100.00%
                    	       		Q8A6I3              	5.03%
Bootstrap support for C0NE81 as seed ortholog is 100%.
Bootstrap support for Q8A7Z9 as seed ortholog is 100%.

Group of orthologs #217. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 B.thetaiotaomicron:134

C0P031              	100.00%		Q8A1S1              	100.00%
                    	       		Q8A9Z0              	30.43%
                    	       		Q8A9Y9              	28.75%
Bootstrap support for C0P031 as seed ortholog is 100%.
Bootstrap support for Q8A1S1 as seed ortholog is 100%.

Group of orthologs #218. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:13 B.thetaiotaomicron:134

C0NYE4              	100.00%		Q89ZJ0              	100.00%
Bootstrap support for C0NYE4 as seed ortholog is 69%.
Alternative seed ortholog is C0NWP3 (13 bits away from this cluster)
Bootstrap support for Q89ZJ0 as seed ortholog is 100%.

Group of orthologs #219. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 B.thetaiotaomicron:133

C0NIZ9              	100.00%		Q8A1X9              	100.00%
C0NKV9              	100.00%		Q8AAV6              	100.00%
                    	       		Q8A1X6              	91.06%
                    	       		Q8AAU2              	31.60%
                    	       		Q8A3V5              	12.58%
Bootstrap support for C0NIZ9 as seed ortholog is 100%.
Bootstrap support for C0NKV9 as seed ortholog is 100%.
Bootstrap support for Q8A1X9 as seed ortholog is 100%.
Bootstrap support for Q8AAV6 as seed ortholog is 100%.

Group of orthologs #220. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:61 B.thetaiotaomicron:54

C0NJX8              	100.00%		Q8A2D0              	100.00%
                    	       		Q8A529              	14.90%
Bootstrap support for C0NJX8 as seed ortholog is 93%.
Bootstrap support for Q8A2D0 as seed ortholog is 91%.

Group of orthologs #221. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:1 B.thetaiotaomicron:129

C0NBI7              	100.00%		Q8A1F8              	100.00%
Bootstrap support for C0NBI7 as seed ortholog is 50%.
Alternative seed ortholog is C0NP90 (1 bits away from this cluster)
Bootstrap support for Q8A1F8 as seed ortholog is 100%.

Group of orthologs #222. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 B.thetaiotaomicron:18

C0NM49              	100.00%		Q8A101              	100.00%
Bootstrap support for C0NM49 as seed ortholog is 100%.
Bootstrap support for Q8A101 as seed ortholog is 76%.

Group of orthologs #223. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:71 B.thetaiotaomicron:129

C0P041              	100.00%		Q8A107              	100.00%
Bootstrap support for C0P041 as seed ortholog is 96%.
Bootstrap support for Q8A107 as seed ortholog is 100%.

Group of orthologs #224. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 B.thetaiotaomicron:128

C0NRW1              	100.00%		Q8A4G9              	100.00%
C0NWB3              	23.83%		Q8A183              	86.87%
Bootstrap support for C0NRW1 as seed ortholog is 100%.
Bootstrap support for Q8A4G9 as seed ortholog is 100%.

Group of orthologs #225. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 B.thetaiotaomicron:128

C0NTN5              	100.00%		Q8A0U6              	100.00%
Bootstrap support for C0NTN5 as seed ortholog is 100%.
Bootstrap support for Q8A0U6 as seed ortholog is 100%.

Group of orthologs #226. Best score 127 bits
Score difference with first non-orthologous sequence - A.capsulata:127 B.thetaiotaomicron:127

C0NZN7              	100.00%		Q89YU4              	100.00%
Bootstrap support for C0NZN7 as seed ortholog is 100%.
Bootstrap support for Q89YU4 as seed ortholog is 100%.

Group of orthologs #227. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:49 B.thetaiotaomicron:124

C0NBD1              	100.00%		Q8A756              	100.00%
Bootstrap support for C0NBD1 as seed ortholog is 83%.
Bootstrap support for Q8A756 as seed ortholog is 100%.

Group of orthologs #228. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:7 B.thetaiotaomicron:8

C0NE90              	100.00%		Q8A8G0              	100.00%
C0NIB7              	100.00%		
Bootstrap support for C0NE90 as seed ortholog is 56%.
Alternative seed ortholog is C0NJS5 (7 bits away from this cluster)
Bootstrap support for C0NIB7 as seed ortholog is 56%.
Alternative seed ortholog is C0NJS5 (7 bits away from this cluster)
Bootstrap support for Q8A8G0 as seed ortholog is 57%.
Alternative seed ortholog is Q8A8L5 (8 bits away from this cluster)

Group of orthologs #229. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:123 B.thetaiotaomicron:123

C0NIZ7              	100.00%		Q8A7G4              	100.00%
Bootstrap support for C0NIZ7 as seed ortholog is 100%.
Bootstrap support for Q8A7G4 as seed ortholog is 100%.

Group of orthologs #230. Best score 121 bits
Score difference with first non-orthologous sequence - A.capsulata:74 B.thetaiotaomicron:121

C0NRK3              	100.00%		Q8A517              	100.00%
C0NCL0              	16.49%		
C0NV89              	5.42%		
Bootstrap support for C0NRK3 as seed ortholog is 95%.
Bootstrap support for Q8A517 as seed ortholog is 100%.

Group of orthologs #231. Best score 121 bits
Score difference with first non-orthologous sequence - A.capsulata:121 B.thetaiotaomicron:121

C0NJ41              	100.00%		Q8A4S8              	100.00%
Bootstrap support for C0NJ41 as seed ortholog is 100%.
Bootstrap support for Q8A4S8 as seed ortholog is 100%.

Group of orthologs #232. Best score 119 bits
Score difference with first non-orthologous sequence - A.capsulata:47 B.thetaiotaomicron:119

C0NTB0              	100.00%		Q8A686              	100.00%
C0NSE0              	11.34%		
C0NA74              	8.50%		
C0NCC1              	6.38%		
C0NS77              	5.87%		
Bootstrap support for C0NTB0 as seed ortholog is 91%.
Bootstrap support for Q8A686 as seed ortholog is 100%.

Group of orthologs #233. Best score 119 bits
Score difference with first non-orthologous sequence - A.capsulata:119 B.thetaiotaomicron:119

C0NGZ5              	100.00%		Q8A5Z7              	100.00%
                    	       		Q8A5B5              	20.29%
                    	       		Q8ABK5              	19.98%
                    	       		Q8A4F5              	10.29%
Bootstrap support for C0NGZ5 as seed ortholog is 100%.
Bootstrap support for Q8A5Z7 as seed ortholog is 100%.

Group of orthologs #234. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 B.thetaiotaomicron:118

C0NDH9              	100.00%		Q89YP0              	100.00%
Bootstrap support for C0NDH9 as seed ortholog is 100%.
Bootstrap support for Q89YP0 as seed ortholog is 100%.

Group of orthologs #235. Best score 117 bits
Score difference with first non-orthologous sequence - A.capsulata:117 B.thetaiotaomicron:117

C0NNU5              	100.00%		Q8AA22              	100.00%
Bootstrap support for C0NNU5 as seed ortholog is 100%.
Bootstrap support for Q8AA22 as seed ortholog is 100%.

Group of orthologs #236. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:19 B.thetaiotaomicron:116

C0NAN4              	100.00%		Q8A0Y8              	100.00%
Bootstrap support for C0NAN4 as seed ortholog is 83%.
Bootstrap support for Q8A0Y8 as seed ortholog is 100%.

Group of orthologs #237. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 B.thetaiotaomicron:116

C0NE98              	100.00%		Q8A2N8              	100.00%
Bootstrap support for C0NE98 as seed ortholog is 100%.
Bootstrap support for Q8A2N8 as seed ortholog is 100%.

Group of orthologs #238. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:114 B.thetaiotaomicron:114

C0NRV7              	100.00%		Q8A005              	100.00%
Bootstrap support for C0NRV7 as seed ortholog is 100%.
Bootstrap support for Q8A005 as seed ortholog is 100%.

Group of orthologs #239. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 B.thetaiotaomicron:113

C0NCI7              	100.00%		Q8A0H8              	100.00%
Bootstrap support for C0NCI7 as seed ortholog is 100%.
Bootstrap support for Q8A0H8 as seed ortholog is 100%.

Group of orthologs #240. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:20 B.thetaiotaomicron:113

C0NPZ3              	100.00%		Q8A2X4              	100.00%
Bootstrap support for C0NPZ3 as seed ortholog is 67%.
Alternative seed ortholog is C0NC95 (20 bits away from this cluster)
Bootstrap support for Q8A2X4 as seed ortholog is 100%.

Group of orthologs #241. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 B.thetaiotaomicron:113

C0NYV9              	100.00%		Q8A1L9              	100.00%
Bootstrap support for C0NYV9 as seed ortholog is 100%.
Bootstrap support for Q8A1L9 as seed ortholog is 100%.

Group of orthologs #242. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 B.thetaiotaomicron:113

C0NRW7              	100.00%		Q8AB00              	100.00%
Bootstrap support for C0NRW7 as seed ortholog is 100%.
Bootstrap support for Q8AB00 as seed ortholog is 100%.

Group of orthologs #243. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:112 B.thetaiotaomicron:112

C0NTP0              	100.00%		Q8A466              	100.00%
Bootstrap support for C0NTP0 as seed ortholog is 100%.
Bootstrap support for Q8A466 as seed ortholog is 100%.

Group of orthologs #244. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:63 B.thetaiotaomicron:109

C0NGG8              	100.00%		Q8A0Z4              	100.00%
Bootstrap support for C0NGG8 as seed ortholog is 97%.
Bootstrap support for Q8A0Z4 as seed ortholog is 100%.

Group of orthologs #245. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 B.thetaiotaomicron:109

C0NLL5              	100.00%		Q8A6R6              	100.00%
Bootstrap support for C0NLL5 as seed ortholog is 100%.
Bootstrap support for Q8A6R6 as seed ortholog is 100%.

Group of orthologs #246. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 B.thetaiotaomicron:108

C0NH46              	100.00%		Q8A9D3              	100.00%
Bootstrap support for C0NH46 as seed ortholog is 100%.
Bootstrap support for Q8A9D3 as seed ortholog is 100%.

Group of orthologs #247. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 B.thetaiotaomicron:108

C0NIF2              	100.00%		Q8A9M6              	100.00%
Bootstrap support for C0NIF2 as seed ortholog is 100%.
Bootstrap support for Q8A9M6 as seed ortholog is 100%.

Group of orthologs #248. Best score 107 bits
Score difference with first non-orthologous sequence - A.capsulata:107 B.thetaiotaomicron:36

C0NPL9              	100.00%		Q8A163              	100.00%
Bootstrap support for C0NPL9 as seed ortholog is 100%.
Bootstrap support for Q8A163 as seed ortholog is 83%.

Group of orthologs #249. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:53 B.thetaiotaomicron:106

C0NJR5              	100.00%		Q89ZF4              	100.00%
C0NYI6              	100.00%		
Bootstrap support for C0NJR5 as seed ortholog is 85%.
Bootstrap support for C0NYI6 as seed ortholog is 77%.
Bootstrap support for Q89ZF4 as seed ortholog is 100%.

Group of orthologs #250. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 B.thetaiotaomicron:18

C0NJR8              	100.00%		Q8AAI8              	100.00%
C0NI64              	12.21%		
Bootstrap support for C0NJR8 as seed ortholog is 100%.
Bootstrap support for Q8AAI8 as seed ortholog is 72%.
Alternative seed ortholog is Q8A823 (18 bits away from this cluster)

Group of orthologs #251. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 B.thetaiotaomicron:106

C0NV37              	100.00%		Q8A857              	100.00%
Bootstrap support for C0NV37 as seed ortholog is 100%.
Bootstrap support for Q8A857 as seed ortholog is 100%.

Group of orthologs #252. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 B.thetaiotaomicron:105

C0NTB3              	100.00%		Q8A400              	100.00%
                    	       		Q8A401              	28.02%
Bootstrap support for C0NTB3 as seed ortholog is 100%.
Bootstrap support for Q8A400 as seed ortholog is 100%.

Group of orthologs #253. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 B.thetaiotaomicron:105

C0NVB1              	100.00%		Q8A1P5              	100.00%
Bootstrap support for C0NVB1 as seed ortholog is 100%.
Bootstrap support for Q8A1P5 as seed ortholog is 100%.

Group of orthologs #254. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 B.thetaiotaomicron:104

C0NDH1              	100.00%		Q8A0W0              	100.00%
C0P046              	100.00%		
Bootstrap support for C0NDH1 as seed ortholog is 100%.
Bootstrap support for C0P046 as seed ortholog is 100%.
Bootstrap support for Q8A0W0 as seed ortholog is 100%.

Group of orthologs #255. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 B.thetaiotaomicron:104

C0NC54              	100.00%		Q8A9U6              	100.00%
Bootstrap support for C0NC54 as seed ortholog is 100%.
Bootstrap support for Q8A9U6 as seed ortholog is 100%.

Group of orthologs #256. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 B.thetaiotaomicron:104

C0NM81              	100.00%		Q8A001              	100.00%
Bootstrap support for C0NM81 as seed ortholog is 100%.
Bootstrap support for Q8A001 as seed ortholog is 100%.

Group of orthologs #257. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 B.thetaiotaomicron:104

C0NP56              	100.00%		Q8A7E7              	100.00%
Bootstrap support for C0NP56 as seed ortholog is 100%.
Bootstrap support for Q8A7E7 as seed ortholog is 100%.

Group of orthologs #258. Best score 103 bits
Score difference with first non-orthologous sequence - A.capsulata:2 B.thetaiotaomicron:103

C0NBT9              	100.00%		Q8A997              	100.00%
Bootstrap support for C0NBT9 as seed ortholog is 45%.
Alternative seed ortholog is C0NZW4 (2 bits away from this cluster)
Bootstrap support for Q8A997 as seed ortholog is 100%.

Group of orthologs #259. Best score 103 bits
Score difference with first non-orthologous sequence - A.capsulata:103 B.thetaiotaomicron:103

C0ND01              	100.00%		Q8A9W1              	100.00%
Bootstrap support for C0ND01 as seed ortholog is 100%.
Bootstrap support for Q8A9W1 as seed ortholog is 100%.

Group of orthologs #260. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:29 B.thetaiotaomicron:101

C0NVG0              	100.00%		Q89YM9              	100.00%
C0NV05              	6.30%		
C0NT58              	5.88%		
Bootstrap support for C0NVG0 as seed ortholog is 79%.
Bootstrap support for Q89YM9 as seed ortholog is 100%.

Group of orthologs #261. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:14 B.thetaiotaomicron:101

C0NRL0              	100.00%		Q8A165              	100.00%
C0NAE6              	15.42%		
Bootstrap support for C0NRL0 as seed ortholog is 72%.
Alternative seed ortholog is C0NRP4 (14 bits away from this cluster)
Bootstrap support for Q8A165 as seed ortholog is 100%.

Group of orthologs #262. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:101 B.thetaiotaomicron:48

C0NIS9              	100.00%		Q8A630              	100.00%
Bootstrap support for C0NIS9 as seed ortholog is 100%.
Bootstrap support for Q8A630 as seed ortholog is 94%.

Group of orthologs #263. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:101 B.thetaiotaomicron:42

C0NHD9              	100.00%		Q8A9E0              	100.00%
Bootstrap support for C0NHD9 as seed ortholog is 100%.
Bootstrap support for Q8A9E0 as seed ortholog is 87%.

Group of orthologs #264. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 B.thetaiotaomicron:99

C0NLM4              	100.00%		Q8A9C0              	100.00%
C0NK71              	16.44%		
Bootstrap support for C0NLM4 as seed ortholog is 100%.
Bootstrap support for Q8A9C0 as seed ortholog is 100%.

Group of orthologs #265. Best score 98 bits
Score difference with first non-orthologous sequence - A.capsulata:98 B.thetaiotaomicron:98

C0NJS7              	100.00%		Q8A1E6              	100.00%
Bootstrap support for C0NJS7 as seed ortholog is 100%.
Bootstrap support for Q8A1E6 as seed ortholog is 100%.

Group of orthologs #266. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 B.thetaiotaomicron:97

C0NV23              	100.00%		Q8ABJ4              	100.00%
                    	       		Q8A9L3              	93.29%
Bootstrap support for C0NV23 as seed ortholog is 100%.
Bootstrap support for Q8ABJ4 as seed ortholog is 100%.

Group of orthologs #267. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 B.thetaiotaomicron:97

C0NC23              	100.00%		Q8A245              	100.00%
Bootstrap support for C0NC23 as seed ortholog is 100%.
Bootstrap support for Q8A245 as seed ortholog is 100%.

Group of orthologs #268. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 B.thetaiotaomicron:96

C0NB09              	100.00%		Q8A838              	100.00%
Bootstrap support for C0NB09 as seed ortholog is 100%.
Bootstrap support for Q8A838 as seed ortholog is 100%.

Group of orthologs #269. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:95 B.thetaiotaomicron:95

C0NJM9              	100.00%		Q8AAD5              	100.00%
Bootstrap support for C0NJM9 as seed ortholog is 100%.
Bootstrap support for Q8AAD5 as seed ortholog is 100%.

Group of orthologs #270. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 B.thetaiotaomicron:94

C0NLE0              	100.00%		Q8A926              	100.00%
Bootstrap support for C0NLE0 as seed ortholog is 100%.
Bootstrap support for Q8A926 as seed ortholog is 100%.

Group of orthologs #271. Best score 93 bits
Score difference with first non-orthologous sequence - A.capsulata:93 B.thetaiotaomicron:93

C0NFT0              	100.00%		Q8A465              	100.00%
Bootstrap support for C0NFT0 as seed ortholog is 100%.
Bootstrap support for Q8A465 as seed ortholog is 100%.

Group of orthologs #272. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 B.thetaiotaomicron:92

C0NDA4              	100.00%		Q8A1A9              	100.00%
                    	       		Q8A6I2              	40.45%
Bootstrap support for C0NDA4 as seed ortholog is 100%.
Bootstrap support for Q8A1A9 as seed ortholog is 100%.

Group of orthologs #273. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 B.thetaiotaomicron:92

C0NM17              	100.00%		Q8AAN2              	100.00%
Bootstrap support for C0NM17 as seed ortholog is 100%.
Bootstrap support for Q8AAN2 as seed ortholog is 100%.

Group of orthologs #274. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 B.thetaiotaomicron:91

C0NBH2              	100.00%		Q8A1G3              	100.00%
C0NJV1              	27.90%		
Bootstrap support for C0NBH2 as seed ortholog is 100%.
Bootstrap support for Q8A1G3 as seed ortholog is 100%.

Group of orthologs #275. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 B.thetaiotaomicron:91

C0NE84              	100.00%		Q8A327              	100.00%
Bootstrap support for C0NE84 as seed ortholog is 100%.
Bootstrap support for Q8A327 as seed ortholog is 100%.

Group of orthologs #276. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 B.thetaiotaomicron:91

C0NI50              	100.00%		Q8A619              	100.00%
Bootstrap support for C0NI50 as seed ortholog is 100%.
Bootstrap support for Q8A619 as seed ortholog is 100%.

Group of orthologs #277. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 B.thetaiotaomicron:91

C0NZX5              	100.00%		Q8A2T1              	100.00%
Bootstrap support for C0NZX5 as seed ortholog is 100%.
Bootstrap support for Q8A2T1 as seed ortholog is 100%.

Group of orthologs #278. Best score 90 bits
Score difference with first non-orthologous sequence - A.capsulata:90 B.thetaiotaomicron:90

C0NKH2              	100.00%		Q8A3W4              	100.00%
Bootstrap support for C0NKH2 as seed ortholog is 100%.
Bootstrap support for Q8A3W4 as seed ortholog is 100%.

Group of orthologs #279. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 B.thetaiotaomicron:89

C0NC11              	100.00%		Q8A8E7              	100.00%
Bootstrap support for C0NC11 as seed ortholog is 100%.
Bootstrap support for Q8A8E7 as seed ortholog is 100%.

Group of orthologs #280. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:21 B.thetaiotaomicron:88

C0NBP7              	100.00%		Q8A433              	100.00%
C0NGR4              	19.46%		
C0ND96              	5.38%		
Bootstrap support for C0NBP7 as seed ortholog is 69%.
Alternative seed ortholog is C0NSA0 (21 bits away from this cluster)
Bootstrap support for Q8A433 as seed ortholog is 100%.

Group of orthologs #281. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:88 B.thetaiotaomicron:88

C0NRR6              	100.00%		Q8A699              	100.00%
Bootstrap support for C0NRR6 as seed ortholog is 100%.
Bootstrap support for Q8A699 as seed ortholog is 100%.

Group of orthologs #282. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 B.thetaiotaomicron:87

C0NI43              	100.00%		Q8A491              	100.00%
Bootstrap support for C0NI43 as seed ortholog is 100%.
Bootstrap support for Q8A491 as seed ortholog is 100%.

Group of orthologs #283. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 B.thetaiotaomicron:87

C0NMP7              	100.00%		Q8A707              	100.00%
Bootstrap support for C0NMP7 as seed ortholog is 100%.
Bootstrap support for Q8A707 as seed ortholog is 100%.

Group of orthologs #284. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 B.thetaiotaomicron:87

C0NQV4              	100.00%		Q8A4A3              	100.00%
Bootstrap support for C0NQV4 as seed ortholog is 100%.
Bootstrap support for Q8A4A3 as seed ortholog is 100%.

Group of orthologs #285. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 B.thetaiotaomicron:87

C0NVE7              	100.00%		Q8A0Z6              	100.00%
Bootstrap support for C0NVE7 as seed ortholog is 100%.
Bootstrap support for Q8A0Z6 as seed ortholog is 100%.

Group of orthologs #286. Best score 85 bits
Score difference with first non-orthologous sequence - A.capsulata:85 B.thetaiotaomicron:31

C0NEB4              	100.00%		Q89ZS2              	100.00%
Bootstrap support for C0NEB4 as seed ortholog is 100%.
Bootstrap support for Q89ZS2 as seed ortholog is 81%.

Group of orthologs #287. Best score 85 bits
Score difference with first non-orthologous sequence - A.capsulata:85 B.thetaiotaomicron:2

C0NHN7              	100.00%		Q89YZ8              	100.00%
Bootstrap support for C0NHN7 as seed ortholog is 100%.
Bootstrap support for Q89YZ8 as seed ortholog is 52%.
Alternative seed ortholog is Q8AAB0 (2 bits away from this cluster)

Group of orthologs #288. Best score 85 bits
Score difference with first non-orthologous sequence - A.capsulata:85 B.thetaiotaomicron:85

C0NZF4              	100.00%		Q8A453              	100.00%
Bootstrap support for C0NZF4 as seed ortholog is 100%.
Bootstrap support for Q8A453 as seed ortholog is 100%.

Group of orthologs #289. Best score 85 bits
Score difference with first non-orthologous sequence - A.capsulata:85 B.thetaiotaomicron:85

C0P159              	100.00%		Q8A3Q4              	100.00%
Bootstrap support for C0P159 as seed ortholog is 100%.
Bootstrap support for Q8A3Q4 as seed ortholog is 100%.

Group of orthologs #290. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 B.thetaiotaomicron:84

C0P0N5              	100.00%		Q8A2K1              	100.00%
C0NGW7              	14.04%		
Bootstrap support for C0P0N5 as seed ortholog is 100%.
Bootstrap support for Q8A2K1 as seed ortholog is 100%.

Group of orthologs #291. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:13 B.thetaiotaomicron:84

C0NM39              	100.00%		Q8A486              	100.00%
Bootstrap support for C0NM39 as seed ortholog is 71%.
Alternative seed ortholog is C0NBF4 (13 bits away from this cluster)
Bootstrap support for Q8A486 as seed ortholog is 100%.

Group of orthologs #292. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 B.thetaiotaomicron:84

C0NT48              	100.00%		Q8A1V7              	100.00%
Bootstrap support for C0NT48 as seed ortholog is 100%.
Bootstrap support for Q8A1V7 as seed ortholog is 100%.

Group of orthologs #293. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 B.thetaiotaomicron:84

C0P132              	100.00%		Q89ZW8              	100.00%
Bootstrap support for C0P132 as seed ortholog is 100%.
Bootstrap support for Q89ZW8 as seed ortholog is 100%.

Group of orthologs #294. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:25 B.thetaiotaomicron:29

C0NP25              	100.00%		Q8A620              	100.00%
Bootstrap support for C0NP25 as seed ortholog is 77%.
Bootstrap support for Q8A620 as seed ortholog is 80%.

Group of orthologs #295. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 B.thetaiotaomicron:82

C0NH90              	100.00%		Q8A4N3              	100.00%
Bootstrap support for C0NH90 as seed ortholog is 100%.
Bootstrap support for Q8A4N3 as seed ortholog is 100%.

Group of orthologs #296. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 B.thetaiotaomicron:82

C0NCN6              	100.00%		Q8ABI7              	100.00%
Bootstrap support for C0NCN6 as seed ortholog is 100%.
Bootstrap support for Q8ABI7 as seed ortholog is 100%.

Group of orthologs #297. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 B.thetaiotaomicron:82

C0NVX9              	100.00%		Q8A493              	100.00%
Bootstrap support for C0NVX9 as seed ortholog is 100%.
Bootstrap support for Q8A493 as seed ortholog is 100%.

Group of orthologs #298. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 B.thetaiotaomicron:82

C0NT90              	100.00%		Q8A9U0              	100.00%
Bootstrap support for C0NT90 as seed ortholog is 100%.
Bootstrap support for Q8A9U0 as seed ortholog is 100%.

Group of orthologs #299. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 B.thetaiotaomicron:79

C0NZZ7              	100.00%		Q8A296              	100.00%
C0NNC6              	12.87%		
Bootstrap support for C0NZZ7 as seed ortholog is 100%.
Bootstrap support for Q8A296 as seed ortholog is 100%.

Group of orthologs #300. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 B.thetaiotaomicron:79

C0NIX0              	100.00%		Q8A0S6              	100.00%
Bootstrap support for C0NIX0 as seed ortholog is 100%.
Bootstrap support for Q8A0S6 as seed ortholog is 100%.

Group of orthologs #301. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 B.thetaiotaomicron:79

C0NDR5              	100.00%		Q8A6S2              	100.00%
Bootstrap support for C0NDR5 as seed ortholog is 100%.
Bootstrap support for Q8A6S2 as seed ortholog is 100%.

Group of orthologs #302. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 B.thetaiotaomicron:79

C0NUJ2              	100.00%		Q8A800              	100.00%
Bootstrap support for C0NUJ2 as seed ortholog is 100%.
Bootstrap support for Q8A800 as seed ortholog is 100%.

Group of orthologs #303. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 B.thetaiotaomicron:78

C0NYM9              	100.00%		Q8A842              	100.00%
Bootstrap support for C0NYM9 as seed ortholog is 100%.
Bootstrap support for Q8A842 as seed ortholog is 100%.

Group of orthologs #304. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:6 B.thetaiotaomicron:77

C0NVW8              	100.00%		Q8A3H8              	100.00%
                    	       		Q8A3H7              	26.13%
                    	       		Q8ABE5              	8.06%
Bootstrap support for C0NVW8 as seed ortholog is 59%.
Alternative seed ortholog is C0NVK2 (6 bits away from this cluster)
Bootstrap support for Q8A3H8 as seed ortholog is 100%.

Group of orthologs #305. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 B.thetaiotaomicron:77

C0NE70              	100.00%		Q8A0T5              	100.00%
Bootstrap support for C0NE70 as seed ortholog is 100%.
Bootstrap support for Q8A0T5 as seed ortholog is 100%.

Group of orthologs #306. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 B.thetaiotaomicron:77

C0NHI8              	100.00%		Q8AA38              	100.00%
Bootstrap support for C0NHI8 as seed ortholog is 100%.
Bootstrap support for Q8AA38 as seed ortholog is 100%.

Group of orthologs #307. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:32 B.thetaiotaomicron:16

C0NYX7              	100.00%		Q8A403              	100.00%
Bootstrap support for C0NYX7 as seed ortholog is 81%.
Bootstrap support for Q8A403 as seed ortholog is 77%.

Group of orthologs #308. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 B.thetaiotaomicron:76

C0NT42              	100.00%		Q89Z51              	100.00%
C0NVR1              	11.66%		
Bootstrap support for C0NT42 as seed ortholog is 100%.
Bootstrap support for Q89Z51 as seed ortholog is 100%.

Group of orthologs #309. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 B.thetaiotaomicron:76

C0NEA4              	100.00%		Q8A1M5              	100.00%
Bootstrap support for C0NEA4 as seed ortholog is 100%.
Bootstrap support for Q8A1M5 as seed ortholog is 100%.

Group of orthologs #310. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 B.thetaiotaomicron:76

C0NGK8              	100.00%		Q8A7K2              	100.00%
Bootstrap support for C0NGK8 as seed ortholog is 100%.
Bootstrap support for Q8A7K2 as seed ortholog is 100%.

Group of orthologs #311. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 B.thetaiotaomicron:76

C0NX82              	100.00%		Q8A191              	100.00%
Bootstrap support for C0NX82 as seed ortholog is 100%.
Bootstrap support for Q8A191 as seed ortholog is 100%.

Group of orthologs #312. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 B.thetaiotaomicron:76

C0NY66              	100.00%		Q8A468              	100.00%
Bootstrap support for C0NY66 as seed ortholog is 100%.
Bootstrap support for Q8A468 as seed ortholog is 100%.

Group of orthologs #313. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 B.thetaiotaomicron:76

C0NXD3              	100.00%		Q8A908              	100.00%
Bootstrap support for C0NXD3 as seed ortholog is 100%.
Bootstrap support for Q8A908 as seed ortholog is 100%.

Group of orthologs #314. Best score 75 bits
Score difference with first non-orthologous sequence - A.capsulata:75 B.thetaiotaomicron:75

C0NTF7              	100.00%		Q8AA85              	100.00%
C0NEI4              	46.47%		Q89ZJ2              	11.76%
C0NW76              	25.46%		
Bootstrap support for C0NTF7 as seed ortholog is 100%.
Bootstrap support for Q8AA85 as seed ortholog is 100%.

Group of orthologs #315. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:21 B.thetaiotaomicron:74

C0NAS6              	100.00%		Q8A6J4              	100.00%
                    	       		Q8A131              	14.73%
                    	       		Q8A9N1              	9.30%
Bootstrap support for C0NAS6 as seed ortholog is 90%.
Bootstrap support for Q8A6J4 as seed ortholog is 100%.

Group of orthologs #316. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 B.thetaiotaomicron:74

C0NJ85              	100.00%		Q8A5V9              	100.00%
Bootstrap support for C0NJ85 as seed ortholog is 100%.
Bootstrap support for Q8A5V9 as seed ortholog is 100%.

Group of orthologs #317. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 B.thetaiotaomicron:74

C0NRA4              	100.00%		Q8A2P4              	100.00%
Bootstrap support for C0NRA4 as seed ortholog is 100%.
Bootstrap support for Q8A2P4 as seed ortholog is 100%.

Group of orthologs #318. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 B.thetaiotaomicron:74

C0NUY1              	100.00%		Q8A734              	100.00%
Bootstrap support for C0NUY1 as seed ortholog is 100%.
Bootstrap support for Q8A734 as seed ortholog is 100%.

Group of orthologs #319. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 B.thetaiotaomicron:74

C0P1F7              	100.00%		Q8A9V1              	100.00%
Bootstrap support for C0P1F7 as seed ortholog is 100%.
Bootstrap support for Q8A9V1 as seed ortholog is 100%.

Group of orthologs #320. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:72 B.thetaiotaomicron:72

C0NG76              	100.00%		Q8A7B8              	100.00%
Bootstrap support for C0NG76 as seed ortholog is 100%.
Bootstrap support for Q8A7B8 as seed ortholog is 100%.

Group of orthologs #321. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 B.thetaiotaomicron:20

C0NNX5              	100.00%		Q8A5L0              	100.00%
                    	       		Q8A7R8              	5.59%
                    	       		Q8AB91              	5.59%
Bootstrap support for C0NNX5 as seed ortholog is 100%.
Bootstrap support for Q8A5L0 as seed ortholog is 87%.

Group of orthologs #322. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 B.thetaiotaomicron:71

C0NTZ0              	100.00%		Q8A767              	100.00%
Bootstrap support for C0NTZ0 as seed ortholog is 100%.
Bootstrap support for Q8A767 as seed ortholog is 100%.

Group of orthologs #323. Best score 70 bits
Score difference with first non-orthologous sequence - A.capsulata:70 B.thetaiotaomicron:70

C0NAB3              	100.00%		Q8A1V9              	100.00%
Bootstrap support for C0NAB3 as seed ortholog is 100%.
Bootstrap support for Q8A1V9 as seed ortholog is 100%.

Group of orthologs #324. Best score 70 bits
Score difference with first non-orthologous sequence - A.capsulata:70 B.thetaiotaomicron:70

C0NEW4              	100.00%		Q8A749              	100.00%
Bootstrap support for C0NEW4 as seed ortholog is 100%.
Bootstrap support for Q8A749 as seed ortholog is 100%.

Group of orthologs #325. Best score 70 bits
Score difference with first non-orthologous sequence - A.capsulata:70 B.thetaiotaomicron:70

C0NR06              	100.00%		Q8A405              	100.00%
Bootstrap support for C0NR06 as seed ortholog is 100%.
Bootstrap support for Q8A405 as seed ortholog is 100%.

Group of orthologs #326. Best score 70 bits
Score difference with first non-orthologous sequence - A.capsulata:70 B.thetaiotaomicron:70

C0NM30              	100.00%		Q8AB68              	100.00%
Bootstrap support for C0NM30 as seed ortholog is 100%.
Bootstrap support for Q8AB68 as seed ortholog is 100%.

Group of orthologs #327. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 B.thetaiotaomicron:18

C0NBR6              	100.00%		Q8A4G8              	100.00%
                    	       		Q8A184              	86.73%
                    	       		Q8A2K4              	34.72%
                    	       		Q8A4H6              	16.49%
                    	       		Q8A174              	13.94%
                    	       		Q8A3K5              	6.30%
Bootstrap support for C0NBR6 as seed ortholog is 100%.
Bootstrap support for Q8A4G8 as seed ortholog is 66%.
Alternative seed ortholog is Q8A1Y7 (18 bits away from this cluster)

Group of orthologs #328. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 B.thetaiotaomicron:69

C0NAM7              	100.00%		Q8A8T1              	100.00%
Bootstrap support for C0NAM7 as seed ortholog is 100%.
Bootstrap support for Q8A8T1 as seed ortholog is 100%.

Group of orthologs #329. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 B.thetaiotaomicron:69

C0NY87              	100.00%		Q89ZB4              	100.00%
Bootstrap support for C0NY87 as seed ortholog is 100%.
Bootstrap support for Q89ZB4 as seed ortholog is 100%.

Group of orthologs #330. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 B.thetaiotaomicron:68

C0NYR6              	100.00%		Q8A744              	100.00%
Bootstrap support for C0NYR6 as seed ortholog is 100%.
Bootstrap support for Q8A744 as seed ortholog is 100%.

Group of orthologs #331. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 B.thetaiotaomicron:67

C0NBU9              	100.00%		Q8A8M6              	100.00%
Bootstrap support for C0NBU9 as seed ortholog is 100%.
Bootstrap support for Q8A8M6 as seed ortholog is 100%.

Group of orthologs #332. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 B.thetaiotaomicron:67

C0NQ37              	100.00%		Q8AA35              	100.00%
Bootstrap support for C0NQ37 as seed ortholog is 100%.
Bootstrap support for Q8AA35 as seed ortholog is 100%.

Group of orthologs #333. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 B.thetaiotaomicron:67

C0NQX7              	100.00%		Q8A9Y0              	100.00%
Bootstrap support for C0NQX7 as seed ortholog is 100%.
Bootstrap support for Q8A9Y0 as seed ortholog is 100%.

Group of orthologs #334. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 B.thetaiotaomicron:66

C0NRD2              	100.00%		Q8A881              	100.00%
                    	       		Q8A8R7              	70.68%
Bootstrap support for C0NRD2 as seed ortholog is 100%.
Bootstrap support for Q8A881 as seed ortholog is 100%.

Group of orthologs #335. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 B.thetaiotaomicron:66

C0NGG1              	100.00%		Q8A2E6              	100.00%
Bootstrap support for C0NGG1 as seed ortholog is 100%.
Bootstrap support for Q8A2E6 as seed ortholog is 100%.

Group of orthologs #336. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 B.thetaiotaomicron:66

C0NCV9              	100.00%		Q8A8C4              	100.00%
Bootstrap support for C0NCV9 as seed ortholog is 100%.
Bootstrap support for Q8A8C4 as seed ortholog is 100%.

Group of orthologs #337. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:65 B.thetaiotaomicron:65

C0NTA4              	100.00%		Q8A628              	100.00%
Bootstrap support for C0NTA4 as seed ortholog is 100%.
Bootstrap support for Q8A628 as seed ortholog is 100%.

Group of orthologs #338. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:65 B.thetaiotaomicron:65

C0NVK0              	100.00%		Q8A7P6              	100.00%
Bootstrap support for C0NVK0 as seed ortholog is 100%.
Bootstrap support for Q8A7P6 as seed ortholog is 100%.

Group of orthologs #339. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:4 B.thetaiotaomicron:17

C0NMI3              	100.00%		Q8A3Z2              	100.00%
Bootstrap support for C0NMI3 as seed ortholog is 56%.
Alternative seed ortholog is C0NME8 (4 bits away from this cluster)
Bootstrap support for Q8A3Z2 as seed ortholog is 75%.

Group of orthologs #340. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 B.thetaiotaomicron:63

C0NBX4              	100.00%		Q8A355              	100.00%
C0NK69              	7.20%		
Bootstrap support for C0NBX4 as seed ortholog is 100%.
Bootstrap support for Q8A355 as seed ortholog is 100%.

Group of orthologs #341. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 B.thetaiotaomicron:63

C0NC22              	100.00%		Q89ZB9              	100.00%
Bootstrap support for C0NC22 as seed ortholog is 100%.
Bootstrap support for Q89ZB9 as seed ortholog is 100%.

Group of orthologs #342. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 B.thetaiotaomicron:63

C0NEW0              	100.00%		Q8A804              	100.00%
Bootstrap support for C0NEW0 as seed ortholog is 100%.
Bootstrap support for Q8A804 as seed ortholog is 100%.

Group of orthologs #343. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 B.thetaiotaomicron:62

C0NQK3              	100.00%		Q8A100              	100.00%
Bootstrap support for C0NQK3 as seed ortholog is 100%.
Bootstrap support for Q8A100 as seed ortholog is 100%.

Group of orthologs #344. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:61 B.thetaiotaomicron:61

C0ND22              	100.00%		Q8A483              	100.00%
Bootstrap support for C0ND22 as seed ortholog is 100%.
Bootstrap support for Q8A483 as seed ortholog is 100%.

Group of orthologs #345. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:61 B.thetaiotaomicron:61

C0NGC4              	100.00%		Q8AB02              	100.00%
Bootstrap support for C0NGC4 as seed ortholog is 100%.
Bootstrap support for Q8AB02 as seed ortholog is 100%.

Group of orthologs #346. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:14 B.thetaiotaomicron:61

C0NV40              	100.00%		Q8A0S1              	100.00%
Bootstrap support for C0NV40 as seed ortholog is 59%.
Alternative seed ortholog is C0NUW5 (14 bits away from this cluster)
Bootstrap support for Q8A0S1 as seed ortholog is 100%.

Group of orthologs #347. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 B.thetaiotaomicron:60

C0NUU3              	100.00%		Q8AAV9              	100.00%
C0NL21              	27.64%		
C0NFN1              	16.02%		
Bootstrap support for C0NUU3 as seed ortholog is 100%.
Bootstrap support for Q8AAV9 as seed ortholog is 100%.

Group of orthologs #348. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 B.thetaiotaomicron:60

C0P198              	100.00%		Q8A4M6              	100.00%
C0NK82              	7.25%		
Bootstrap support for C0P198 as seed ortholog is 100%.
Bootstrap support for Q8A4M6 as seed ortholog is 100%.

Group of orthologs #349. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 B.thetaiotaomicron:60

C0NKP6              	100.00%		Q8A7I5              	100.00%
Bootstrap support for C0NKP6 as seed ortholog is 100%.
Bootstrap support for Q8A7I5 as seed ortholog is 100%.

Group of orthologs #350. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 B.thetaiotaomicron:59

C0NW75              	100.00%		Q8A3X9              	100.00%
C0NSB6              	42.21%		
Bootstrap support for C0NW75 as seed ortholog is 100%.
Bootstrap support for Q8A3X9 as seed ortholog is 100%.

Group of orthologs #351. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 B.thetaiotaomicron:59

C0P180              	100.00%		Q8A018              	100.00%
                    	       		Q89ZQ3              	8.72%
Bootstrap support for C0P180 as seed ortholog is 100%.
Bootstrap support for Q8A018 as seed ortholog is 100%.

Group of orthologs #352. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 B.thetaiotaomicron:59

C0NGW1              	100.00%		Q8A489              	100.00%
Bootstrap support for C0NGW1 as seed ortholog is 100%.
Bootstrap support for Q8A489 as seed ortholog is 100%.

Group of orthologs #353. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 B.thetaiotaomicron:59

C0NWY5              	100.00%		Q8A8D1              	100.00%
Bootstrap support for C0NWY5 as seed ortholog is 100%.
Bootstrap support for Q8A8D1 as seed ortholog is 100%.

Group of orthologs #354. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 B.thetaiotaomicron:57

C0NC21              	100.00%		Q8A2E5              	100.00%
                    	       		Q8A3S1              	11.26%
                    	       		Q8A7Z3              	6.59%
Bootstrap support for C0NC21 as seed ortholog is 100%.
Bootstrap support for Q8A2E5 as seed ortholog is 100%.

Group of orthologs #355. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 B.thetaiotaomicron:57

C0NS96              	100.00%		Q8A3Z3              	100.00%
                    	       		Q89ZP0              	11.79%
Bootstrap support for C0NS96 as seed ortholog is 100%.
Bootstrap support for Q8A3Z3 as seed ortholog is 100%.

Group of orthologs #356. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:2 B.thetaiotaomicron:57

C0NAE5              	100.00%		Q8A499              	100.00%
Bootstrap support for C0NAE5 as seed ortholog is 54%.
Alternative seed ortholog is C0NX47 (2 bits away from this cluster)
Bootstrap support for Q8A499 as seed ortholog is 100%.

Group of orthologs #357. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:13 B.thetaiotaomicron:57

C0NVE4              	100.00%		Q8A4A0              	100.00%
Bootstrap support for C0NVE4 as seed ortholog is 67%.
Alternative seed ortholog is C0NJG6 (13 bits away from this cluster)
Bootstrap support for Q8A4A0 as seed ortholog is 100%.

Group of orthologs #358. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 B.thetaiotaomicron:57

C0NVD4              	100.00%		Q8A7W4              	100.00%
Bootstrap support for C0NVD4 as seed ortholog is 100%.
Bootstrap support for Q8A7W4 as seed ortholog is 100%.

Group of orthologs #359. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 B.thetaiotaomicron:56

C0NRB6              	100.00%		Q89YV3              	100.00%
C0NQX1              	20.55%		
C0NB06              	19.09%		
C0NBB1              	11.77%		
C0NKY0              	9.63%		
C0NHE5              	8.66%		
C0NWM9              	8.05%		
C0NS49              	7.01%		
C0NFH7              	5.79%		
C0NSL2              	5.37%		
Bootstrap support for C0NRB6 as seed ortholog is 100%.
Bootstrap support for Q89YV3 as seed ortholog is 100%.

Group of orthologs #360. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 B.thetaiotaomicron:56

C0NSV1              	100.00%		Q89Z19              	100.00%
Bootstrap support for C0NSV1 as seed ortholog is 100%.
Bootstrap support for Q89Z19 as seed ortholog is 100%.

Group of orthologs #361. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 B.thetaiotaomicron:56

C0NQD2              	100.00%		Q8A5W3              	100.00%
Bootstrap support for C0NQD2 as seed ortholog is 100%.
Bootstrap support for Q8A5W3 as seed ortholog is 100%.

Group of orthologs #362. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 B.thetaiotaomicron:56

C0NVE6              	100.00%		Q8A0Z5              	100.00%
Bootstrap support for C0NVE6 as seed ortholog is 100%.
Bootstrap support for Q8A0Z5 as seed ortholog is 100%.

Group of orthologs #363. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 B.thetaiotaomicron:56

C0NZZ0              	100.00%		Q8A5W2              	100.00%
Bootstrap support for C0NZZ0 as seed ortholog is 100%.
Bootstrap support for Q8A5W2 as seed ortholog is 100%.

Group of orthologs #364. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 B.thetaiotaomicron:56

C0NZM7              	100.00%		Q8A848              	100.00%
Bootstrap support for C0NZM7 as seed ortholog is 100%.
Bootstrap support for Q8A848 as seed ortholog is 100%.

Group of orthologs #365. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 B.thetaiotaomicron:55

C0NJY9              	100.00%		Q8A618              	100.00%
Bootstrap support for C0NJY9 as seed ortholog is 100%.
Bootstrap support for Q8A618 as seed ortholog is 100%.

Group of orthologs #366. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 B.thetaiotaomicron:3

C0NIU2              	100.00%		Q8A9S3              	100.00%
Bootstrap support for C0NIU2 as seed ortholog is 100%.
Bootstrap support for Q8A9S3 as seed ortholog is 53%.
Alternative seed ortholog is Q8A1E9 (3 bits away from this cluster)

Group of orthologs #367. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 B.thetaiotaomicron:55

C0P0F4              	100.00%		Q8A2E8              	100.00%
Bootstrap support for C0P0F4 as seed ortholog is 100%.
Bootstrap support for Q8A2E8 as seed ortholog is 100%.

Group of orthologs #368. Best score 53 bits
Score difference with first non-orthologous sequence - A.capsulata:53 B.thetaiotaomicron:53

C0NUD0              	100.00%		Q8A482              	100.00%
Bootstrap support for C0NUD0 as seed ortholog is 100%.
Bootstrap support for Q8A482 as seed ortholog is 100%.

Group of orthologs #369. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 B.thetaiotaomicron:52

C0NRS9              	100.00%		Q8A9W8              	100.00%
C0NL92              	28.29%		
Bootstrap support for C0NRS9 as seed ortholog is 100%.
Bootstrap support for Q8A9W8 as seed ortholog is 100%.

Group of orthologs #370. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 B.thetaiotaomicron:52

C0NE72              	100.00%		Q8A295              	100.00%
Bootstrap support for C0NE72 as seed ortholog is 100%.
Bootstrap support for Q8A295 as seed ortholog is 100%.

Group of orthologs #371. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 B.thetaiotaomicron:52

C0NPB0              	100.00%		Q8A5Q6              	100.00%
Bootstrap support for C0NPB0 as seed ortholog is 100%.
Bootstrap support for Q8A5Q6 as seed ortholog is 100%.

Group of orthologs #372. Best score 51 bits
Score difference with first non-orthologous sequence - A.capsulata:51 B.thetaiotaomicron:51

C0NYI7              	100.00%		Q89YL3              	100.00%
Bootstrap support for C0NYI7 as seed ortholog is 100%.
Bootstrap support for Q89YL3 as seed ortholog is 100%.

Group of orthologs #373. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 B.thetaiotaomicron:50

C0NHS9              	100.00%		Q8A765              	100.00%
                    	       		Q8A8R2              	71.80%
Bootstrap support for C0NHS9 as seed ortholog is 100%.
Bootstrap support for Q8A765 as seed ortholog is 100%.

Group of orthologs #374. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 B.thetaiotaomicron:50

C0NVL5              	100.00%		Q8A8M1              	100.00%
C0NH59              	37.18%		
Bootstrap support for C0NVL5 as seed ortholog is 100%.
Bootstrap support for Q8A8M1 as seed ortholog is 100%.

Group of orthologs #375. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 B.thetaiotaomicron:50

C0NY69              	100.00%		Q8ABG1              	100.00%
Bootstrap support for C0NY69 as seed ortholog is 100%.
Bootstrap support for Q8ABG1 as seed ortholog is 100%.

Group of orthologs #376. Best score 49 bits
Score difference with first non-orthologous sequence - A.capsulata:49 B.thetaiotaomicron:49

C0NBY7              	100.00%		Q8A3A4              	100.00%
C0NXS6              	100.00%		Q8A793              	38.22%
Bootstrap support for C0NBY7 as seed ortholog is 100%.
Bootstrap support for C0NXS6 as seed ortholog is 100%.
Bootstrap support for Q8A3A4 as seed ortholog is 100%.

Group of orthologs #377. Best score 49 bits
Score difference with first non-orthologous sequence - A.capsulata:49 B.thetaiotaomicron:49

C0NNM9              	100.00%		Q8A1D2              	100.00%
Bootstrap support for C0NNM9 as seed ortholog is 100%.
Bootstrap support for Q8A1D2 as seed ortholog is 100%.

Group of orthologs #378. Best score 48 bits
Score difference with first non-orthologous sequence - A.capsulata:48 B.thetaiotaomicron:48

C0NN76              	100.00%		Q8A037              	100.00%
                    	       		Q89ZR1              	10.31%
Bootstrap support for C0NN76 as seed ortholog is 100%.
Bootstrap support for Q8A037 as seed ortholog is 100%.

Group of orthologs #379. Best score 48 bits
Score difference with first non-orthologous sequence - A.capsulata:48 B.thetaiotaomicron:48

C0NLD5              	100.00%		Q89ZW3              	100.00%
Bootstrap support for C0NLD5 as seed ortholog is 100%.
Bootstrap support for Q89ZW3 as seed ortholog is 100%.

Group of orthologs #380. Best score 47 bits
Score difference with first non-orthologous sequence - A.capsulata:47 B.thetaiotaomicron:47

C0NZD2              	100.00%		Q8A475              	100.00%
Bootstrap support for C0NZD2 as seed ortholog is 100%.
Bootstrap support for Q8A475 as seed ortholog is 100%.

Group of orthologs #381. Best score 46 bits
Score difference with first non-orthologous sequence - A.capsulata:46 B.thetaiotaomicron:46

C0NLR5              	100.00%		Q8A4A1              	100.00%
Bootstrap support for C0NLR5 as seed ortholog is 100%.
Bootstrap support for Q8A4A1 as seed ortholog is 100%.

Group of orthologs #382. Best score 46 bits
Score difference with first non-orthologous sequence - A.capsulata:46 B.thetaiotaomicron:46

C0NQC7              	100.00%		Q8A399              	100.00%
Bootstrap support for C0NQC7 as seed ortholog is 100%.
Bootstrap support for Q8A399 as seed ortholog is 100%.

Group of orthologs #383. Best score 46 bits
Score difference with first non-orthologous sequence - A.capsulata:46 B.thetaiotaomicron:46

C0NQV8              	100.00%		Q8A472              	100.00%
Bootstrap support for C0NQV8 as seed ortholog is 100%.
Bootstrap support for Q8A472 as seed ortholog is 100%.

Group of orthologs #384. Best score 45 bits
Score difference with first non-orthologous sequence - A.capsulata:45 B.thetaiotaomicron:45

C0NA64              	100.00%		Q8A1D5              	100.00%
Bootstrap support for C0NA64 as seed ortholog is 100%.
Bootstrap support for Q8A1D5 as seed ortholog is 100%.

Group of orthologs #385. Best score 45 bits
Score difference with first non-orthologous sequence - A.capsulata:45 B.thetaiotaomicron:45

C0NEP3              	100.00%		Q8A490              	100.00%
Bootstrap support for C0NEP3 as seed ortholog is 100%.
Bootstrap support for Q8A490 as seed ortholog is 100%.

Group of orthologs #386. Best score 45 bits
Score difference with first non-orthologous sequence - A.capsulata:45 B.thetaiotaomicron:45

C0NH01              	100.00%		Q8A5K7              	100.00%
Bootstrap support for C0NH01 as seed ortholog is 100%.
Bootstrap support for Q8A5K7 as seed ortholog is 100%.

Group of orthologs #387. Best score 45 bits
Score difference with first non-orthologous sequence - A.capsulata:45 B.thetaiotaomicron:45

C0NNL3              	100.00%		Q8A0Q7              	100.00%
Bootstrap support for C0NNL3 as seed ortholog is 100%.
Bootstrap support for Q8A0Q7 as seed ortholog is 100%.

Group of orthologs #388. Best score 45 bits
Score difference with first non-orthologous sequence - A.capsulata:45 B.thetaiotaomicron:45

C0NWW6              	100.00%		Q8A007              	100.00%
Bootstrap support for C0NWW6 as seed ortholog is 100%.
Bootstrap support for Q8A007 as seed ortholog is 100%.

Group of orthologs #389. Best score 44 bits
Score difference with first non-orthologous sequence - A.capsulata:44 B.thetaiotaomicron:44

C0NCU9              	100.00%		Q8A0U9              	100.00%
                    	       		Q8A571              	12.38%
Bootstrap support for C0NCU9 as seed ortholog is 100%.
Bootstrap support for Q8A0U9 as seed ortholog is 100%.

Group of orthologs #390. Best score 44 bits
Score difference with first non-orthologous sequence - A.capsulata:44 B.thetaiotaomicron:44

C0NSP3              	100.00%		Q8A4Q5              	100.00%
                    	       		Q8A947              	28.91%
Bootstrap support for C0NSP3 as seed ortholog is 100%.
Bootstrap support for Q8A4Q5 as seed ortholog is 100%.

Group of orthologs #391. Best score 44 bits
Score difference with first non-orthologous sequence - A.capsulata:44 B.thetaiotaomicron:44

C0ND07              	100.00%		Q8A9U8              	100.00%
Bootstrap support for C0ND07 as seed ortholog is 100%.
Bootstrap support for Q8A9U8 as seed ortholog is 100%.

Group of orthologs #392. Best score 43 bits
Score difference with first non-orthologous sequence - A.capsulata:43 B.thetaiotaomicron:43

C0NJA3              	100.00%		Q45791              	100.00%
C0NB28              	35.38%		
Bootstrap support for C0NJA3 as seed ortholog is 100%.
Bootstrap support for Q45791 as seed ortholog is 100%.

Group of orthologs #393. Best score 42 bits
Score difference with first non-orthologous sequence - A.capsulata:42 B.thetaiotaomicron:42

C0P0X9              	100.00%		Q8AA65              	100.00%
C0NH53              	19.88%		Q8AAT4              	91.42%
                    	       		Q8A832              	44.97%
                    	       		Q8A670              	13.17%
                    	       		Q8AAJ8              	11.09%
Bootstrap support for C0P0X9 as seed ortholog is 100%.
Bootstrap support for Q8AA65 as seed ortholog is 100%.

Group of orthologs #394. Best score 41 bits
Score difference with first non-orthologous sequence - A.capsulata:41 B.thetaiotaomicron:41

C0NC52              	100.00%		Q8A380              	100.00%
Bootstrap support for C0NC52 as seed ortholog is 100%.
Bootstrap support for Q8A380 as seed ortholog is 100%.

Group of orthologs #395. Best score 40 bits
Score difference with first non-orthologous sequence - A.capsulata:40 B.thetaiotaomicron:40

C0NSJ1              	100.00%		Q8A1S8              	100.00%
                    	       		Q8A236              	11.50%
                    	       		Q8A5T0              	8.15%
                    	       		Q89ZC9              	8.04%
                    	       		Q8A234              	5.92%
                    	       		Q8A1S6              	5.58%
Bootstrap support for C0NSJ1 as seed ortholog is 100%.
Bootstrap support for Q8A1S8 as seed ortholog is 100%.

Group of orthologs #396. Best score 40 bits
Score difference with first non-orthologous sequence - A.capsulata:40 B.thetaiotaomicron:40

C0NAG5              	100.00%		Q8A488              	100.00%
Bootstrap support for C0NAG5 as seed ortholog is 100%.
Bootstrap support for Q8A488 as seed ortholog is 100%.