<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="1084" inparalogs="2493"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Spathaspora passalidarum " NCBITaxId="619300">
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        <gene id="2470" protId="G3AQ22" geneId="SPAPADRAFT_61422"/>
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        <gene id="2476" protId="G3AI21" geneId="SPAPADRAFT_54487"/>
        <gene id="2478" protId="G3ATY9" geneId="SPAPADRAFT_63216"/>
        <gene id="2480" protId="G3AT42" geneId="SPAPADRAFT_142199"/>
        <gene id="2485" protId="G3ARZ9" geneId="SPAPADRAFT_62459"/>
        <gene id="2487" protId="G3AGQ7" geneId="SPAPADRAFT_58608"/>
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        <gene id="2492" protId="G3AIY9" geneId="SPAPADRAFT_59154"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="S.passalidarum" link="http://www.uniprot.org/taxonomy/619300"/>
    </notes>
  </species>
  <species name="Trypanosoma cruzi " NCBITaxId="5693">
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        <gene id="2343" protId="K4E296" geneId="TCSYLVIO_004301"/>
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        <gene id="2385" protId="K4E1D4" geneId="TCSYLVIO_004519"/>
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        <gene id="2469" protId="K4E3V5" geneId="TCSYLVIO_003743"/>
        <gene id="2471" protId="K4DUQ4" geneId="TCSYLVIO_007101"/>
        <gene id="2473" protId="K4EAH5" geneId="TCSYLVIO_001299"/>
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        <gene id="2477" protId="K4E779" geneId="TCSYLVIO_002382"/>
        <gene id="2479" protId="K4EDT8" geneId="TCSYLVIO_000197"/>
        <gene id="2481" protId="K4DSI0" geneId="TCSYLVIO_007685"/>
        <gene id="2482" protId="K4E2D8" geneId="TCSYLVIO_004596"/>
        <gene id="2483" protId="K4E1W8" geneId="TCSYLVIO_004408"/>
        <gene id="2484" protId="K4DXV9" geneId="TCSYLVIO_005882"/>
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        <gene id="2489" protId="K4DPS8" geneId="TCSYLVIO_008924"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="T.cruzi" link="http://www.uniprot.org/taxonomy/5693"/>
    </notes>
  </species>
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    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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