<?xml version="1.0" encoding="utf-8"?>
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  <notes>
    <stats ortholog_groups="3079" inparalogs="7212"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
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    <notes>
      <additionalInformation abbreviation="P.brasiliensis" link="http://www.uniprot.org/taxonomy/482561"/>
    </notes>
  </species>
  <species name="Phanerochaete carnosa " NCBITaxId="650164">
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        <gene id="7074" protId="K5WB10" geneId="PHACADRAFT_92488"/>
        <gene id="7076" protId="K5W358" geneId="PHACADRAFT_193412"/>
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        <gene id="7106" protId="K5VMC0" geneId="PHACADRAFT_261148"/>
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        <gene id="7188" protId="K5X662" geneId="PHACADRAFT_252539"/>
        <gene id="7190" protId="K5UGH4" geneId="PHACADRAFT_108699"/>
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        <gene id="7192" protId="K5VZ09" geneId="PHACADRAFT_262181"/>
        <gene id="7193" protId="K5WIE4" geneId="PHACADRAFT_264484"/>
        <gene id="7194" protId="K5W3P8" geneId="PHACADRAFT_211405"/>
        <gene id="7195" protId="K5VFP7" geneId="PHACADRAFT_130474"/>
        <gene id="7196" protId="K5VD50" geneId="PHACADRAFT_107626"/>
        <gene id="7197" protId="K5VPI0" geneId="PHACADRAFT_214722"/>
        <gene id="7198" protId="K5VWW2" geneId="PHACADRAFT_212989"/>
        <gene id="7199" protId="K5WK32" geneId="PHACADRAFT_129976"/>
        <gene id="7200" protId="K5VTV0" geneId="PHACADRAFT_213766"/>
        <gene id="7201" protId="K5ULR2" geneId="PHACADRAFT_213520"/>
        <gene id="7202" protId="K5WTL8" geneId="PHACADRAFT_260287"/>
        <gene id="7203" protId="K5VQ89" geneId="PHACADRAFT_214610"/>
        <gene id="7204" protId="K5WTR6" geneId="PHACADRAFT_260336"/>
        <gene id="7205" protId="K5UV09" geneId="PHACADRAFT_260340"/>
        <gene id="7206" protId="K5UV06" geneId="PHACADRAFT_260333"/>
        <gene id="7207" protId="K5VQU3" geneId="PHACADRAFT_211450"/>
        <gene id="7208" protId="K5W4F7" geneId="PHACADRAFT_260344"/>
        <gene id="7209" protId="K5UHD1" geneId="PHACADRAFT_214611"/>
        <gene id="7210" protId="K5WT90" geneId="PHACADRAFT_260122"/>
        <gene id="7211" protId="K5UYX0" geneId="PHACADRAFT_28378"/>
        <gene id="7212" protId="K5W4U1" geneId="PHACADRAFT_257476"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="P.carnosa" link="http://www.uniprot.org/taxonomy/650164"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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      <geneRef id="1">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="2">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="2">
      <score id="bit" value="3481"/>
      <geneRef id="3">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="4">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="3">
      <score id="bit" value="2884"/>
      <geneRef id="5">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="6">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="4">
      <score id="bit" value="2703"/>
      <geneRef id="7">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="8">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="5">
      <score id="bit" value="2493"/>
      <geneRef id="9">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="10">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="6">
      <score id="bit" value="2269"/>
      <geneRef id="11">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="12">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="7">
      <score id="bit" value="2224"/>
      <geneRef id="13">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="14">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="8">
      <score id="bit" value="2150"/>
      <geneRef id="15">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="16">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="17">
        <score id="inparalog" value="0.31"/>
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    </orthologGroup>
    <orthologGroup id="9">
      <score id="bit" value="2095"/>
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        <score id="inparalog" value="1"/>
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      <geneRef id="19">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="10">
      <score id="bit" value="2038"/>
      <geneRef id="20">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="21">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="11">
      <score id="bit" value="2020"/>
      <geneRef id="22">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="23">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="12">
      <score id="bit" value="1968"/>
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        <score id="inparalog" value="1"/>
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      <geneRef id="25">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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    </orthologGroup>
    <orthologGroup id="13">
      <score id="bit" value="1965"/>
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      <geneRef id="27">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="14">
      <score id="bit" value="1937"/>
      <geneRef id="28">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="29">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="15">
      <score id="bit" value="1792"/>
      <geneRef id="30">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="31">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="16">
      <score id="bit" value="1645"/>
      <geneRef id="32">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="33">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="17">
      <score id="bit" value="1573"/>
      <geneRef id="34">
        <score id="inparalog" value="1"/>
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      <geneRef id="35">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="18">
      <score id="bit" value="1494"/>
      <geneRef id="36">
        <score id="inparalog" value="1"/>
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      <geneRef id="37">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="19">
      <score id="bit" value="1485"/>
      <geneRef id="38">
        <score id="inparalog" value="1"/>
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      <geneRef id="39">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="20">
      <score id="bit" value="1476"/>
      <geneRef id="40">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="41">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="21">
      <score id="bit" value="1472"/>
      <geneRef id="42">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="43">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="22">
      <score id="bit" value="1470"/>
      <geneRef id="44">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="45">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="23">
      <score id="bit" value="1456"/>
      <geneRef id="46">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="47">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="24">
      <score id="bit" value="1446"/>
      <geneRef id="48">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="49">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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    </orthologGroup>
    <orthologGroup id="25">
      <score id="bit" value="1419"/>
      <geneRef id="50">
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      <geneRef id="51">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <score id="bit" value="1414"/>
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        <score id="bootstrap" value="1"/>
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      <geneRef id="54">
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        <score id="bootstrap" value="1"/>
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