<?xml version="1.0" encoding="utf-8"?>
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    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
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    <notes>
      <additionalInformation abbreviation="P.alecto" link="http://www.uniprot.org/taxonomy/9402"/>
    </notes>
  </species>
  <species name="Polysphondylium pallidum " NCBITaxId="13642">
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        <gene id="6176" protId="D3B9C9" geneId="gins3"/>
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        <gene id="6198" protId="D3BM01" geneId="lrlA"/>
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        <gene id="6207" protId="D3BKB7" geneId="adcA"/>
        <gene id="6210" protId="D3B7E1" geneId="nudc"/>
        <gene id="6213" protId="D3BPP1" geneId="rps25"/>
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        <gene id="6223" protId="D3B3R8" geneId="prafB"/>
        <gene id="6225" protId="D3BHP1" geneId="PPL_08046"/>
        <gene id="6227" protId="D3B637" geneId="vps55"/>
        <gene id="6229" protId="D3B4P5" geneId="PPL_03370"/>
        <gene id="6231" protId="D3BHP4" geneId="srp14-2"/>
        <gene id="6233" protId="D3AXI7" geneId="PPL_00818"/>
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        <gene id="6269" protId="D3BPL5" geneId="trmt61"/>
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        <gene id="6290" protId="D3BMN2" geneId="PPL_12455"/>
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        <gene id="6295" protId="D3B8K1" geneId="PPL_04794"/>
        <gene id="6296" protId="D3B4A7" geneId="PPL_03229"/>
        <gene id="6298" protId="D3B6S3" geneId="xrcc4"/>
        <gene id="6300" protId="D3BUL3" geneId="purB"/>
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        <gene id="6312" protId="D3BM93" geneId="fslA"/>
        <gene id="6313" protId="D3BR87" geneId="fslK"/>
        <gene id="6314" protId="D3AYT6" geneId="fslC"/>
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        <gene id="6316" protId="D3BUC6" geneId="fscC"/>
        <gene id="6318" protId="D3B3P0" geneId="proA"/>
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        <gene id="6321" protId="D3BLB5" geneId="PPL_09347"/>
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        <gene id="6337" protId="D3BHE1" geneId="PPL_07943"/>
        <gene id="6339" protId="D3BH72" geneId="arsB"/>
        <gene id="6341" protId="D3BJL0" geneId="PPL_08738"/>
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        <gene id="6345" protId="D3AVN1" geneId="dnajc19"/>
        <gene id="6347" protId="D3B2R9" geneId="PPL_02683"/>
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        <gene id="6365" protId="D3B9D4" geneId="PPL_05078"/>
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        <gene id="6370" protId="D3BUJ8" geneId="PPL_11819"/>
        <gene id="6371" protId="D3BL91" geneId="PPL_09323"/>
        <gene id="6373" protId="D3AXD0" geneId="PPL_00761"/>
        <gene id="6375" protId="D3BV65" geneId="dpm3"/>
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        <gene id="6379" protId="D3BL14" geneId="med9"/>
        <gene id="6381" protId="D3BL78" geneId="PPL_09310"/>
        <gene id="6401" protId="D3BAY3" geneId="PPL_05714"/>
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        <gene id="6407" protId="D3BC46" geneId="PPL_06068"/>
        <gene id="6410" protId="D3BL89" geneId="PPL_09321"/>
        <gene id="6412" protId="D3AXQ1" geneId="egeB"/>
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        <gene id="6418" protId="D3BQ44" geneId="PPL_10364"/>
        <gene id="6491" protId="D3BB91" geneId="PPL_05277"/>
        <gene id="6492" protId="D3BQF1" geneId="crlC"/>
        <gene id="6497" protId="D3BFH4" geneId="srfD"/>
        <gene id="6499" protId="D3B8X3" geneId="pyr4"/>
        <gene id="6501" protId="D3BKA6" geneId="timm10"/>
        <gene id="6505" protId="D3BN25" geneId="PPL_12602"/>
        <gene id="6507" protId="D3BEA9" geneId="PPL_07065"/>
        <gene id="6509" protId="D3BAI6" geneId="atox1"/>
        <gene id="6511" protId="D3AVZ4" geneId="PPL_00260"/>
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        <gene id="6513" protId="D3B469" geneId="PPL_03190"/>
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    <notes>
      <additionalInformation abbreviation="P.pallidum" link="http://www.uniprot.org/taxonomy/13642"/>
    </notes>
  </species>
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    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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