<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="12695" inparalogs="26373"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Oryctolagus cuniculus " NCBITaxId="9986">
    <database name="UniProt" version="UniProt_Complete_Proteomes_2013_06" protLink="http://www.uniprot.org/uniprot/">
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        <gene id="6" protId="G1TDU6" geneId="NEB"/>
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        <gene id="10" protId="G1T873" geneId="HERC1"/>
        <gene id="12" protId="G1SM24" geneId="uncharacterized_G1SM24"/>
        <gene id="14" protId="G1SRC9" geneId="BIRC6"/>
        <gene id="16" protId="G1TTS6" geneId="uncharacterized_G1TTS6"/>
        <gene id="18" protId="G1TIC4" geneId="LOC100344127"/>
        <gene id="20" protId="G1SSX2" geneId="uncharacterized_G1SSX2"/>
        <gene id="22" protId="G1T5K0" geneId="HMCN1"/>
        <gene id="24" protId="G1TN89" geneId="HSPG2"/>
        <gene id="26" protId="G1SP79" geneId="uncharacterized_G1SP79"/>
        <gene id="28" protId="G1SQK2" geneId="uncharacterized_G1SQK2"/>
        <gene id="30" protId="G1U101" geneId="LOC100355078"/>
        <gene id="32" protId="G1T0P3" geneId="uncharacterized_G1T0P3"/>
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        <gene id="36" protId="G1TL36" geneId="USP34"/>
        <gene id="38" protId="G1T6S4" geneId="uncharacterized_G1T6S4"/>
        <gene id="40" protId="G1TIF2" geneId="LOC100356130"/>
        <gene id="42" protId="G1TW93" geneId="DNAH8"/>
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        <gene id="46" protId="G1T291" geneId="uncharacterized_G1T291"/>
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        <gene id="50" protId="G1TTB8" geneId="LOC100349416"/>
        <gene id="52" protId="G1SRT4" geneId="uncharacterized_G1SRT4"/>
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        <gene id="56" protId="G1SID3" geneId="uncharacterized_G1SID3"/>
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        <gene id="59" protId="P30957" geneId="RYR2"/>
        <gene id="60" protId="P11716" geneId="RYR1"/>
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        <gene id="74" protId="G1T033" geneId="uncharacterized_G1T033"/>
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        <gene id="80" protId="G1SRN0" geneId="LOC100339642"/>
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        <gene id="84" protId="G1SYN6" geneId="uncharacterized_G1SYN6"/>
        <gene id="86" protId="G1TDP5" geneId="GPR98"/>
        <gene id="88" protId="G1T0P0" geneId="uncharacterized_G1T0P0"/>
        <gene id="90" protId="G1TC15" geneId="LOC100354937"/>
        <gene id="92" protId="G1T2M3" geneId="FAT2"/>
        <gene id="94" protId="G1TCX3" geneId="REV3L"/>
        <gene id="96" protId="G1U9R4" geneId="uncharacterized_G1U9R4"/>
        <gene id="98" protId="G1T0H5" geneId="LRP2"/>
        <gene id="100" protId="G1SVG6" geneId="NF1"/>
        <gene id="102" protId="G1SY40" geneId="LAMA3"/>
        <gene id="104" protId="G1T6J1" geneId="DNAH11"/>
        <gene id="106" protId="G1U864" geneId="uncharacterized_G1U864"/>
        <gene id="108" protId="G1SY78" geneId="uncharacterized_G1SY78"/>
        <gene id="110" protId="G1U9B3" geneId="uncharacterized_G1U9B3"/>
        <gene id="112" protId="G1TS24" geneId="LOC100338459"/>
        <gene id="114" protId="G1SVF3" geneId="uncharacterized_G1SVF3"/>
        <gene id="116" protId="G1TF43" geneId="uncharacterized_G1TF43"/>
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        <gene id="126" protId="G1TA45" geneId="uncharacterized_G1TA45"/>
        <gene id="128" protId="G1TMP6" geneId="uncharacterized_G1TMP6"/>
        <gene id="130" protId="G1SY00" geneId="SLC6A4"/>
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        <gene id="134" protId="G1T3D1" geneId="LOC100340420"/>
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        <gene id="140" protId="G1T7E5" geneId="SPEG"/>
        <gene id="142" protId="G1SKG9" geneId="LOC100352700"/>
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        <gene id="178" protId="G1SS02" geneId="JMJD1C"/>
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        <gene id="190" protId="G1SG02" geneId="ZFHX4"/>
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        <gene id="202" protId="G1SK88" geneId="PCNX"/>
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        <gene id="206" protId="G1SR52" geneId="uncharacterized_G1SR52"/>
        <gene id="208" protId="G1SDM9" geneId="ZFYVE26"/>
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        <gene id="212" protId="G1SG92" geneId="ATRX"/>
        <gene id="214" protId="G1TDW3" geneId="LOC100342832"/>
        <gene id="216" protId="G1SKS3" geneId="uncharacterized_G1SKS3"/>
        <gene id="218" protId="Q95209" geneId="SORL1"/>
        <gene id="220" protId="G1TCQ8" geneId="DNHD1"/>
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        <gene id="226" protId="G1STZ5" geneId="uncharacterized_G1STZ5"/>
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        <gene id="232" protId="G1SY30" geneId="LOC100350234"/>
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        <gene id="252" protId="G1T429" geneId="uncharacterized_G1T429"/>
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        <gene id="258" protId="G1SHA4" geneId="uncharacterized_G1SHA4"/>
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        <gene id="270" protId="G1U018" geneId="IGF2R"/>
        <gene id="272" protId="G1SNA1" geneId="LOC100352675"/>
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        <gene id="280" protId="G1TXQ8" geneId="LOC100357067"/>
        <gene id="282" protId="G1SNP1" geneId="ARID1A"/>
        <gene id="284" protId="G1T818" geneId="uncharacterized_G1T818"/>
        <gene id="286" protId="G1SI28" geneId="uncharacterized_G1SI28"/>
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        <gene id="316" protId="G1TRK2" geneId="uncharacterized_G1TRK2"/>
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        <gene id="26230" protId="G1TZQ4" geneId="LOC100349925"/>
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        <gene id="26335" protId="G1U6Z7" geneId="LOC100342609"/>
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        <gene id="26349" protId="G1U504" geneId="uncharacterized_G1U504"/>
        <gene id="26351" protId="G1T1A1" geneId="LOC100352139"/>
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        <gene id="26357" protId="G1SX03" geneId="LOC100340838"/>
        <gene id="26359" protId="G1SW27" geneId="uncharacterized_G1SW27"/>
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        <gene id="26368" protId="G1TDN3" geneId="LOC100344596"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="O.cuniculus" link="http://www.uniprot.org/taxonomy/9986"/>
    </notes>
  </species>
  <species name="Pteropus alecto " NCBITaxId="9402">
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    <notes>
      <additionalInformation abbreviation="P.alecto" link="http://www.uniprot.org/taxonomy/9402"/>
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