<?xml version="1.0" encoding="utf-8"?>
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  <notes>
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    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
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    <notes>
      <additionalInformation abbreviation="M.oryzae" link="http://www.uniprot.org/taxonomy/242507"/>
    </notes>
  </species>
  <species name="Phytophthora ramorum PE=2 SV=1" NCBITaxId="164328">
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        <gene id="1861" protId="H3GWM1" geneId="uncharacterized_H3GWM1"/>
        <gene id="1863" protId="H3GSJ6" geneId="uncharacterized_H3GSJ6"/>
        <gene id="1865" protId="H3HCZ5" geneId="uncharacterized_H3HCZ5"/>
        <gene id="1867" protId="H3G6G2" geneId="gwEuk.27.35.1"/>
        <gene id="1868" protId="H3GB26" geneId="uncharacterized_H3GB26"/>
        <gene id="1870" protId="H3G601" geneId="gwEuk.2.277.1"/>
        <gene id="1872" protId="H3H7F1" geneId="uncharacterized_H3H7F1"/>
        <gene id="1873" protId="H3GEF2" geneId="uncharacterized_H3GEF2"/>
        <gene id="1874" protId="H3HBZ9" geneId="uncharacterized_H3HBZ9"/>
        <gene id="1876" protId="H3G8T9" geneId="uncharacterized_H3G8T9"/>
        <gene id="1878" protId="H3G4X4" geneId="gwEuk.1.88.1"/>
        <gene id="1880" protId="H3GS79" geneId="uncharacterized_H3GS79"/>
        <gene id="1882" protId="H3GAJ5" geneId="uncharacterized_H3GAJ5"/>
        <gene id="1883" protId="H3H1C9" geneId="uncharacterized_H3H1C9"/>
        <gene id="1884" protId="H3GB81" geneId="fgenesh1_pm.C_scaffold_1802000001"/>
        <gene id="1885" protId="H3G9B6" geneId="uncharacterized_H3G9B6"/>
        <gene id="1886" protId="H3G9B4" geneId="uncharacterized_H3G9B4"/>
        <gene id="1887" protId="H3GB00" geneId="uncharacterized_H3GB00"/>
        <gene id="1888" protId="H3G9P4" geneId="uncharacterized_H3G9P4"/>
        <gene id="1889" protId="H3GAI6" geneId="uncharacterized_H3GAI6"/>
        <gene id="1890" protId="H3G8H3" geneId="uncharacterized_H3G8H3"/>
        <gene id="1891" protId="H3G7J7" geneId="gwEuk.635.5.1"/>
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        <gene id="1895" protId="H3GM85" geneId="uncharacterized_H3GM85"/>
        <gene id="1897" protId="H3G9A8" geneId="uncharacterized_H3G9A8"/>
        <gene id="1898" protId="H3G8F9" geneId="uncharacterized_H3G8F9"/>
        <gene id="1900" protId="H3G4X8" geneId="gwEuk.1.199.1"/>
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        <gene id="1904" protId="H3G9K1" geneId="uncharacterized_H3G9K1"/>
        <gene id="1906" protId="H3GV30" geneId="uncharacterized_H3GV30"/>
        <gene id="1907" protId="H3GV33" geneId="uncharacterized_H3GV33"/>
        <gene id="1909" protId="H3G925" geneId="uncharacterized_H3G925"/>
        <gene id="1911" protId="H3GWU9" geneId="uncharacterized_H3GWU9"/>
        <gene id="1913" protId="H3GTZ8" geneId="uncharacterized_H3GTZ8"/>
        <gene id="1915" protId="H3HE00" geneId="uncharacterized_H3HE00"/>
        <gene id="1917" protId="H3GAM0" geneId="uncharacterized_H3GAM0"/>
        <gene id="1919" protId="H3GZ97" geneId="uncharacterized_H3GZ97"/>
        <gene id="1922" protId="H3G4X6" geneId="gwEuk.1.137.1"/>
        <gene id="1924" protId="H3G9C1" geneId="uncharacterized_H3G9C1"/>
        <gene id="1925" protId="H3G892" geneId="uncharacterized_H3G892"/>
        <gene id="1927" protId="H3G7D8" geneId="gwEuk.57.45.1"/>
        <gene id="1929" protId="H3G8N1" geneId="uncharacterized_H3G8N1"/>
        <gene id="1931" protId="H3G8V3" geneId="uncharacterized_H3G8V3"/>
        <gene id="1933" protId="H3GBW1" geneId="uncharacterized_H3GBW1"/>
        <gene id="1935" protId="H3H1Q7" geneId="uncharacterized_H3H1Q7"/>
        <gene id="1937" protId="H3G854" geneId="uncharacterized_H3G854"/>
        <gene id="1939" protId="H3G9D1" geneId="uncharacterized_H3G9D1"/>
        <gene id="1941" protId="H3G9Y3" geneId="uncharacterized_H3G9Y3"/>
        <gene id="1943" protId="H3GTG5" geneId="uncharacterized_H3GTG5"/>
        <gene id="1945" protId="H3G8B2" geneId="uncharacterized_H3G8B2"/>
        <gene id="1947" protId="H3HED0" geneId="uncharacterized_H3HED0"/>
        <gene id="1949" protId="H3G8J0" geneId="uncharacterized_H3G8J0"/>
        <gene id="1951" protId="H3GE42" geneId="uncharacterized_H3GE42"/>
        <gene id="1953" protId="H3GNU1" geneId="uncharacterized_H3GNU1"/>
        <gene id="1955" protId="H3G561" geneId="gwEuk.112.28.1"/>
        <gene id="1957" protId="H3GYD8" geneId="uncharacterized_H3GYD8"/>
        <gene id="1959" protId="H3G7V7" geneId="gwEuk.83.11.1"/>
        <gene id="1961" protId="H3GT58" geneId="uncharacterized_H3GT58"/>
        <gene id="1963" protId="H3GZX9" geneId="uncharacterized_H3GZX9"/>
        <gene id="1965" protId="H3G7S5" geneId="gwEuk.78.41.1"/>
        <gene id="1966" protId="H3G6L1" geneId="gwEuk.298.3.1"/>
        <gene id="1968" protId="H3G6S4" geneId="gwEuk.34.17.1"/>
        <gene id="1969" protId="H3GPY6" geneId="uncharacterized_H3GPY6"/>
        <gene id="1971" protId="H3G7G1" geneId="gwEuk.6.86.1"/>
        <gene id="1973" protId="H3G9M3" geneId="uncharacterized_H3G9M3"/>
        <gene id="1975" protId="H3GAH9" geneId="uncharacterized_H3GAH9"/>
        <gene id="1977" protId="H3G8G2" geneId="uncharacterized_H3G8G2"/>
        <gene id="1979" protId="H3GAL6" geneId="uncharacterized_H3GAL6"/>
        <gene id="1981" protId="H3GSS3" geneId="uncharacterized_H3GSS3"/>
        <gene id="1983" protId="H3G7L2" geneId="gwEuk.66.54.1"/>
        <gene id="1985" protId="H3G6M0" geneId="gwEuk.3.65.1"/>
        <gene id="1987" protId="H3G797" geneId="gwEuk.51.113.1"/>
        <gene id="1992" protId="H3GAJ1" geneId="uncharacterized_H3GAJ1"/>
        <gene id="1994" protId="H3G867" geneId="uncharacterized_H3G867"/>
        <gene id="1996" protId="H3HBM0" geneId="uncharacterized_H3HBM0"/>
        <gene id="1998" protId="H3HAT3" geneId="uncharacterized_H3HAT3"/>
        <gene id="2001" protId="H3G6T6" geneId="gwEuk.35.108.1"/>
        <gene id="2003" protId="H3G8F2" geneId="uncharacterized_H3G8F2"/>
        <gene id="2005" protId="H3G699" geneId="gwEuk.23.169.1"/>
        <gene id="2007" protId="H3GA11" geneId="uncharacterized_H3GA11"/>
        <gene id="2009" protId="H3GY61" geneId="uncharacterized_H3GY61"/>
        <gene id="2011" protId="H3HCX5" geneId="uncharacterized_H3HCX5"/>
        <gene id="2016" protId="H3GAV3" geneId="uncharacterized_H3GAV3"/>
        <gene id="2017" protId="H3H4C4" geneId="uncharacterized_H3H4C4"/>
        <gene id="2018" protId="H3H7B4" geneId="uncharacterized_H3H7B4"/>
        <gene id="2019" protId="H3G977" geneId="uncharacterized_H3G977"/>
        <gene id="2020" protId="H3H5U5" geneId="uncharacterized_H3H5U5"/>
        <gene id="2021" protId="H3H3Z9" geneId="uncharacterized_H3H3Z9"/>
        <gene id="2022" protId="H3GTA9" geneId="uncharacterized_H3GTA9"/>
        <gene id="2023" protId="H3GTC2" geneId="uncharacterized_H3GTC2"/>
        <gene id="2024" protId="H3GTC3" geneId="uncharacterized_H3GTC3"/>
        <gene id="2025" protId="H3GCR6" geneId="uncharacterized_H3GCR6"/>
        <gene id="2028" protId="H3G793" geneId="gwEuk.51.29.1"/>
        <gene id="2030" protId="H3GGZ4" geneId="uncharacterized_H3GGZ4"/>
        <gene id="2032" protId="H3G8V6" geneId="uncharacterized_H3G8V6"/>
        <gene id="2034" protId="H3GXW8" geneId="uncharacterized_H3GXW8"/>
        <gene id="2035" protId="H3G7D1" geneId="gwEuk.56.84.1"/>
        <gene id="2037" protId="H3GQ96" geneId="uncharacterized_H3GQ96"/>
        <gene id="2039" protId="H3G8D5" geneId="uncharacterized_H3G8D5"/>
        <gene id="2041" protId="H3HB77" geneId="uncharacterized_H3HB77"/>
        <gene id="2043" protId="H3GEU2" geneId="uncharacterized_H3GEU2"/>
        <gene id="2045" protId="H3G7S0" geneId="gwEuk.77.61.1"/>
        <gene id="2047" protId="H3G672" geneId="gwEuk.22.132.1"/>
        <gene id="2050" protId="H3G9I6" geneId="uncharacterized_H3G9I6"/>
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        <gene id="2054" protId="H3G670" geneId="gwEuk.22.83.1"/>
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        <gene id="2058" protId="H3G8R9" geneId="uncharacterized_H3G8R9"/>
        <gene id="2060" protId="H3GMY0" geneId="uncharacterized_H3GMY0"/>
        <gene id="2062" protId="H3GD00" geneId="uncharacterized_H3GD00"/>
        <gene id="2064" protId="H3HDG0" geneId="uncharacterized_H3HDG0"/>
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        <gene id="2079" protId="H3H158" geneId="uncharacterized_H3H158"/>
        <gene id="2080" protId="H3H159" geneId="uncharacterized_H3H159"/>
        <gene id="2081" protId="H3H633" geneId="uncharacterized_H3H633"/>
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        <gene id="2087" protId="H3GU55" geneId="uncharacterized_H3GU55"/>
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        <gene id="2123" protId="H3GD20" geneId="uncharacterized_H3GD20"/>
        <gene id="2125" protId="H3GSN9" geneId="uncharacterized_H3GSN9"/>
        <gene id="2126" protId="H3GSM9" geneId="uncharacterized_H3GSM9"/>
        <gene id="2127" protId="H3GSN0" geneId="uncharacterized_H3GSN0"/>
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        <gene id="2251" protId="H3H115" geneId="uncharacterized_H3H115"/>
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        <gene id="2254" protId="H3GAR1" geneId="uncharacterized_H3GAR1"/>
        <gene id="2256" protId="H3GB12" geneId="uncharacterized_H3GB12"/>
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        <gene id="5704" protId="H3GFL0" geneId="uncharacterized_H3GFL0"/>
        <gene id="5705" protId="H3GS64" geneId="uncharacterized_H3GS64"/>
        <gene id="5707" protId="H3GPK3" geneId="uncharacterized_H3GPK3"/>
        <gene id="5708" protId="H3GPK5" geneId="uncharacterized_H3GPK5"/>
        <gene id="5710" protId="H3GNS7" geneId="uncharacterized_H3GNS7"/>
        <gene id="5712" protId="H3GGF3" geneId="uncharacterized_H3GGF3"/>
        <gene id="5714" protId="H3GHD5" geneId="uncharacterized_H3GHD5"/>
        <gene id="5716" protId="H3HE08" geneId="uncharacterized_H3HE08"/>
        <gene id="5718" protId="H3H725" geneId="uncharacterized_H3H725"/>
        <gene id="5720" protId="H3GXC3" geneId="uncharacterized_H3GXC3"/>
        <gene id="5721" protId="H3H329" geneId="uncharacterized_H3H329"/>
        <gene id="5722" protId="H3H341" geneId="uncharacterized_H3H341"/>
        <gene id="5723" protId="H3HEB8" geneId="uncharacterized_H3HEB8"/>
        <gene id="5724" protId="H3H342" geneId="uncharacterized_H3H342"/>
        <gene id="5725" protId="H3H328" geneId="uncharacterized_H3H328"/>
        <gene id="5726" protId="H3GU46" geneId="uncharacterized_H3GU46"/>
        <gene id="5728" protId="H3GJ28" geneId="uncharacterized_H3GJ28"/>
        <gene id="5730" protId="H3H2R7" geneId="uncharacterized_H3H2R7"/>
        <gene id="5732" protId="H3HCC9" geneId="uncharacterized_H3HCC9"/>
        <gene id="5747" protId="H3GR62" geneId="uncharacterized_H3GR62"/>
        <gene id="5748" protId="H3GFA6" geneId="uncharacterized_H3GFA6"/>
        <gene id="5749" protId="H3GFA7" geneId="uncharacterized_H3GFA7"/>
        <gene id="5750" protId="H3GPM3" geneId="uncharacterized_H3GPM3"/>
        <gene id="5751" protId="H3GPM2" geneId="uncharacterized_H3GPM2"/>
        <gene id="5752" protId="H3GPM1" geneId="uncharacterized_H3GPM1"/>
        <gene id="5753" protId="H3GCI8" geneId="uncharacterized_H3GCI8"/>
        <gene id="5754" protId="H3GPM4" geneId="uncharacterized_H3GPM4"/>
        <gene id="5755" protId="H3HCH2" geneId="uncharacterized_H3HCH2"/>
        <gene id="5756" protId="H3GI94" geneId="uncharacterized_H3GI94"/>
        <gene id="5757" protId="H3GEM4" geneId="uncharacterized_H3GEM4"/>
        <gene id="5759" protId="H3GRT0" geneId="uncharacterized_H3GRT0"/>
        <gene id="5760" protId="H3H885" geneId="fgenesh1_pg.C_scaffold_1438000002"/>
        <gene id="5761" protId="H3GQH5" geneId="uncharacterized_H3GQH5"/>
        <gene id="5763" protId="H3G918" geneId="uncharacterized_H3G918"/>
        <gene id="5765" protId="H3GYI8" geneId="uncharacterized_H3GYI8"/>
        <gene id="5767" protId="H3H117" geneId="uncharacterized_H3H117"/>
        <gene id="5769" protId="H3GD79" geneId="uncharacterized_H3GD79"/>
        <gene id="5771" protId="H3HBI0" geneId="uncharacterized_H3HBI0"/>
        <gene id="5773" protId="H3H420" geneId="uncharacterized_H3H420"/>
        <gene id="5775" protId="H3H2K3" geneId="uncharacterized_H3H2K3"/>
        <gene id="5791" protId="H3GJY4" geneId="uncharacterized_H3GJY4"/>
        <gene id="5794" protId="H3GTM6" geneId="uncharacterized_H3GTM6"/>
        <gene id="5795" protId="H3GTM5" geneId="uncharacterized_H3GTM5"/>
        <gene id="5796" protId="H3GMT1" geneId="uncharacterized_H3GMT1"/>
        <gene id="5797" protId="H3GMT0" geneId="uncharacterized_H3GMT0"/>
        <gene id="5798" protId="H3GMS8" geneId="uncharacterized_H3GMS8"/>
        <gene id="5800" protId="H3GAD0" geneId="uncharacterized_H3GAD0"/>
        <gene id="5801" protId="H3GA23" geneId="uncharacterized_H3GA23"/>
        <gene id="5803" protId="H3GFH3" geneId="uncharacterized_H3GFH3"/>
        <gene id="5805" protId="H3GBP4" geneId="uncharacterized_H3GBP4"/>
        <gene id="5807" protId="H3GJ89" geneId="uncharacterized_H3GJ89"/>
        <gene id="5809" protId="H3GQP4" geneId="uncharacterized_H3GQP4"/>
        <gene id="5811" protId="H3GS60" geneId="uncharacterized_H3GS60"/>
        <gene id="5813" protId="H3H701" geneId="uncharacterized_H3H701"/>
        <gene id="5815" protId="H3H3X7" geneId="uncharacterized_H3H3X7"/>
        <gene id="5817" protId="H3GJR3" geneId="uncharacterized_H3GJR3"/>
        <gene id="5818" protId="H3GJR2" geneId="uncharacterized_H3GJR2"/>
        <gene id="5819" protId="H3GJR1" geneId="uncharacterized_H3GJR1"/>
        <gene id="5820" protId="H3GJR4" geneId="uncharacterized_H3GJR4"/>
        <gene id="5821" protId="H3GJW4" geneId="uncharacterized_H3GJW4"/>
        <gene id="5822" protId="H3GJF5" geneId="uncharacterized_H3GJF5"/>
        <gene id="5823" protId="H3GJW3" geneId="uncharacterized_H3GJW3"/>
        <gene id="5827" protId="H3GJZ8" geneId="uncharacterized_H3GJZ8"/>
        <gene id="5829" protId="H3GHD4" geneId="uncharacterized_H3GHD4"/>
        <gene id="5831" protId="H3GIM4" geneId="uncharacterized_H3GIM4"/>
        <gene id="5833" protId="H3GZ47" geneId="uncharacterized_H3GZ47"/>
        <gene id="5835" protId="H3GMX3" geneId="uncharacterized_H3GMX3"/>
        <gene id="5837" protId="H3GJN8" geneId="uncharacterized_H3GJN8"/>
        <gene id="5841" protId="H3GDE0" geneId="uncharacterized_H3GDE0"/>
        <gene id="5842" protId="H3H1G0" geneId="uncharacterized_H3H1G0"/>
        <gene id="5843" protId="H3H8P9" geneId="fgenesh1_pg.C_scaffold_1645000003"/>
        <gene id="5844" protId="H3GD73" geneId="uncharacterized_H3GD73"/>
        <gene id="5845" protId="H3GCT7" geneId="uncharacterized_H3GCT7"/>
        <gene id="5846" protId="H3HB18" geneId="uncharacterized_H3HB18"/>
        <gene id="5847" protId="H3HB19" geneId="uncharacterized_H3HB19"/>
        <gene id="5848" protId="H3GD72" geneId="uncharacterized_H3GD72"/>
        <gene id="5850" protId="H3GEA2" geneId="uncharacterized_H3GEA2"/>
        <gene id="5851" protId="H3GEA3" geneId="uncharacterized_H3GEA3"/>
        <gene id="5852" protId="H3GEA4" geneId="uncharacterized_H3GEA4"/>
        <gene id="5856" protId="H3GWS9" geneId="uncharacterized_H3GWS9"/>
        <gene id="5858" protId="H3GBQ4" geneId="uncharacterized_H3GBQ4"/>
        <gene id="5859" protId="H3GYG1" geneId="uncharacterized_H3GYG1"/>
        <gene id="5861" protId="H3GKP4" geneId="uncharacterized_H3GKP4"/>
        <gene id="5863" protId="H3GJQ4" geneId="uncharacterized_H3GJQ4"/>
        <gene id="5865" protId="H3HDV5" geneId="uncharacterized_H3HDV5"/>
        <gene id="5866" protId="H3GZ68" geneId="uncharacterized_H3GZ68"/>
        <gene id="5867" protId="H3GZ73" geneId="uncharacterized_H3GZ73"/>
        <gene id="5868" protId="H3HC30" geneId="uncharacterized_H3HC30"/>
        <gene id="5871" protId="H3GEQ0" geneId="uncharacterized_H3GEQ0"/>
        <gene id="5872" protId="H3GEQ1" geneId="uncharacterized_H3GEQ1"/>
        <gene id="5874" protId="H3GR60" geneId="uncharacterized_H3GR60"/>
        <gene id="5876" protId="H3H421" geneId="uncharacterized_H3H421"/>
        <gene id="5878" protId="H3GBG7" geneId="uncharacterized_H3GBG7"/>
        <gene id="5880" protId="H3GJ69" geneId="uncharacterized_H3GJ69"/>
        <gene id="5882" protId="H3GLQ8" geneId="uncharacterized_H3GLQ8"/>
        <gene id="5884" protId="H3H081" geneId="uncharacterized_H3H081"/>
        <gene id="5886" protId="H3GAB9" geneId="uncharacterized_H3GAB9"/>
        <gene id="5887" protId="H3GZH9" geneId="uncharacterized_H3GZH9"/>
        <gene id="5889" protId="H3HCN4" geneId="uncharacterized_H3HCN4"/>
        <gene id="5891" protId="H3GGH6" geneId="uncharacterized_H3GGH6"/>
        <gene id="5893" protId="H3HCB0" geneId="uncharacterized_H3HCB0"/>
        <gene id="5895" protId="H3GKQ3" geneId="uncharacterized_H3GKQ3"/>
        <gene id="5897" protId="H3GQD6" geneId="uncharacterized_H3GQD6"/>
        <gene id="5899" protId="H3H0L8" geneId="uncharacterized_H3H0L8"/>
        <gene id="5901" protId="H3H303" geneId="uncharacterized_H3H303"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="P.ramorum" link="http://www.uniprot.org/taxonomy/164328"/>
    </notes>
  </species>
  <scores>
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    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
  </scores>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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