<?xml version="1.0" encoding="utf-8"?>
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  <notes>
    <stats ortholog_groups="404" inparalogs="1035"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Leptospira interrogans" NCBITaxId="189518">
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        <gene id="754" protId="Q8F7S1" geneId="LA_0873"/>
        <gene id="755" protId="Q8F118" geneId="LA_3321"/>
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        <gene id="758" protId="Q8F3F6" geneId="LA_2450"/>
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        <gene id="764" protId="Q8F116" geneId="LA_3323"/>
        <gene id="765" protId="Q8F117" geneId="LA_3322"/>
        <gene id="766" protId="Q8F3F4" geneId="LA_2452"/>
        <gene id="767" protId="Q8F2B3" geneId="LA_2862"/>
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        <gene id="773" protId="Q8EXW1" geneId="LB_096"/>
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        <gene id="777" protId="Q8F6I3" geneId="purL"/>
        <gene id="781" protId="Q8F4I7" geneId="mmsB"/>
        <gene id="783" protId="Q8F3W3" geneId="tal"/>
        <gene id="785" protId="Q8F734" geneId="LA_1114"/>
        <gene id="790" protId="Q8EYK3" geneId="eriC"/>
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        <gene id="803" protId="Q8F632" geneId="LA_1480"/>
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        <gene id="960" protId="Q8EZ20" geneId="uhpC"/>
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        <gene id="964" protId="Q8F660" geneId="pssA"/>
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        <gene id="977" protId="Q8F4Z2" geneId="LA_1896"/>
        <gene id="979" protId="Q8F2J6" geneId="atpC"/>
        <gene id="981" protId="Q8F1Q0" geneId="LA_3079"/>
        <gene id="985" protId="Q8EZ70" geneId="LA_3988"/>
        <gene id="988" protId="Q93TV7" geneId="hsp15"/>
        <gene id="989" protId="Q8F5V3" geneId="ibpA"/>
        <gene id="992" protId="P52277" geneId="recA"/>
        <gene id="995" protId="Q8EZH9" geneId="surE"/>
        <gene id="997" protId="Q8EY68" geneId="LA_4349"/>
        <gene id="999" protId="Q9XD37" geneId="rpsJ"/>
        <gene id="1001" protId="Q8F8Z9" geneId="LA_0399"/>
        <gene id="1003" protId="Q8F0S5" geneId="rpsG"/>
        <gene id="1005" protId="Q8F473" geneId="LA_2172"/>
        <gene id="1007" protId="Q8EZB9" geneId="LA_3936"/>
        <gene id="1009" protId="Q8EZ79" geneId="LA_3977"/>
        <gene id="1011" protId="Q8F6X5" geneId="LA_1174"/>
        <gene id="1012" protId="Q8EY81" geneId="LA_4336"/>
        <gene id="1015" protId="Q8CXU6" geneId="LA_0397"/>
        <gene id="1017" protId="Q8EYX4" geneId="LA_4089"/>
        <gene id="1019" protId="Q8EZ42" geneId="ribD"/>
        <gene id="1021" protId="Q8F3L1" geneId="rpsP"/>
        <gene id="1023" protId="Q8F0D5" geneId="csdB"/>
        <gene id="1025" protId="Q8F031" geneId="LA_3666"/>
        <gene id="1027" protId="Q8F0R8" geneId="rplK"/>
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        <gene id="1033" protId="Q8EZ81" geneId="acyP"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="L.interrogans" link="http://www.uniprot.org/taxonomy/189518"/>
    </notes>
  </species>
  <species name="Pyrenophora tritici-repentis" NCBITaxId="426418">
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        <gene id="1004" protId="B2WKH8" geneId="PTRG_10488"/>
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        <gene id="1008" protId="B2WM88" geneId="PTRG_11098"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="P.tritici-repentis" link="http://www.uniprot.org/taxonomy/426418"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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