<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="3253" inparalogs="7485"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
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    <notes>
      <additionalInformation abbreviation="L.bicolor" link="http://www.uniprot.org/taxonomy/486041"/>
    </notes>
  </species>
  <species name="Penicillium digitatum " NCBITaxId="1170229">
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        <gene id="6959" protId="K9FS11" geneId="PDIG_43790"/>
        <gene id="6961" protId="K9G8I3" geneId="PDIG_61560"/>
        <gene id="6963" protId="K9GQD0" geneId="PDIG_27540"/>
        <gene id="6965" protId="K9GU22" geneId="PDIG_19920"/>
        <gene id="6967" protId="K9G5U3" geneId="PDIG_15840"/>
        <gene id="6971" protId="K9FK88" geneId="PDIG_59070"/>
        <gene id="6973" protId="K9FRM7" geneId="PDIG_48280"/>
        <gene id="6975" protId="K9F9N5" geneId="PDIG_80310"/>
        <gene id="6977" protId="K9GAL2" geneId="PDIG_47650"/>
        <gene id="6979" protId="K9GIL7" geneId="PDIG_40750"/>
        <gene id="6981" protId="K9FXI9" geneId="PDIG_79830"/>
        <gene id="6986" protId="K9FZ09" geneId="PDIG_35860"/>
        <gene id="6987" protId="K9FT39" geneId="PDIG_41390"/>
        <gene id="6989" protId="K9G0D7" geneId="PDIG_26780"/>
        <gene id="6991" protId="K9G2S9" geneId="PDIG_28680"/>
        <gene id="6993" protId="K9G197" geneId="PDIG_31050"/>
        <gene id="6995" protId="K9FXL8" geneId="PDIG_35830"/>
        <gene id="6997" protId="K9GWS2" geneId="PDIG_05600"/>
        <gene id="6999" protId="K9GSD1" geneId="PDIG_23510"/>
        <gene id="7001" protId="K9FYH6" geneId="PDIG_34410"/>
        <gene id="7003" protId="K9GJX0" geneId="PDIG_28940"/>
        <gene id="7008" protId="K9GDK2" geneId="PDIG_41180"/>
        <gene id="7011" protId="K9FYJ8" geneId="PDIG_78940"/>
        <gene id="7013" protId="K9FEC7" geneId="PDIG_77190"/>
        <gene id="7015" protId="K9FYH3" geneId="PDIG_38010"/>
        <gene id="7017" protId="K9FA59" geneId="PDIG_87030"/>
        <gene id="7019" protId="K9GE72" geneId="PDIG_03220"/>
        <gene id="7021" protId="K9FCH4" geneId="PDIG_80040"/>
        <gene id="7023" protId="K9FU06" geneId="PDIG_77940"/>
        <gene id="7025" protId="K9FWR4" geneId="PDIG_74320"/>
        <gene id="7027" protId="K9FUU0" geneId="PDIG_77200"/>
        <gene id="7029" protId="K9H3T8" geneId="PDIG_00840"/>
        <gene id="7033" protId="K9GKI3" geneId="PDIG_36470"/>
        <gene id="7034" protId="K9GR96" geneId="PDIG_24400"/>
        <gene id="7035" protId="K9G3E2" geneId="PDIG_26800"/>
        <gene id="7036" protId="K9FBF0" geneId="PDIG_77310"/>
        <gene id="7038" protId="K9FAF3" geneId="PDIG_79520"/>
        <gene id="7040" protId="K9FPW1" geneId="PDIG_52410"/>
        <gene id="7042" protId="K9FWU4" geneId="PDIG_37880"/>
        <gene id="7044" protId="K9GWT8" geneId="PDIG_05750"/>
        <gene id="7046" protId="K9GPL5" geneId="PDIG_20140"/>
        <gene id="7050" protId="K9FNR6" geneId="PDIG_51160"/>
        <gene id="7051" protId="K9GD90" geneId="PDIG_00570"/>
        <gene id="7052" protId="K9FC08" geneId="PDIG_82590"/>
        <gene id="7056" protId="K9FDY8" geneId="PDIG_71810"/>
        <gene id="7060" protId="K9GRT3" geneId="PDIG_15670"/>
        <gene id="7062" protId="K9F6H0" geneId="PDIG_87060"/>
        <gene id="7064" protId="K9FJ41" geneId="PDIG_61700"/>
        <gene id="7066" protId="K9FT97" geneId="PDIG_81800"/>
        <gene id="7068" protId="K9FNH7" geneId="PDIG_55000"/>
        <gene id="7070" protId="K9G6S6" geneId="PDIG_67500"/>
        <gene id="7072" protId="K9GZX0" geneId="PDIG_07900"/>
        <gene id="7074" protId="K9G244" geneId="PDIG_30360"/>
        <gene id="7076" protId="K9FWZ1" geneId="PDIG_74870"/>
        <gene id="7086" protId="K9G9C2" geneId="PDIG_08290"/>
        <gene id="7088" protId="K9FYX9" geneId="PDIG_33400"/>
        <gene id="7090" protId="K9GCW0" geneId="PDIG_42740"/>
        <gene id="7092" protId="K9GSX6" geneId="PDIG_21750"/>
        <gene id="7094" protId="K9FNY5" geneId="PDIG_89490"/>
        <gene id="7096" protId="K9GCS7" geneId="PDIG_01160"/>
        <gene id="7098" protId="K9GCT7" geneId="PDIG_04790"/>
        <gene id="7100" protId="K9GWG2" geneId="PDIG_06760"/>
        <gene id="7102" protId="K9FKP4" geneId="PDIG_58510"/>
        <gene id="7104" protId="K9F9W5" geneId="PDIG_78060"/>
        <gene id="7106" protId="K9G4Q8" geneId="PDIG_18460"/>
        <gene id="7108" protId="K9FJ27" geneId="PDIG_61450"/>
        <gene id="7110" protId="K9G247" geneId="PDIG_26770"/>
        <gene id="7112" protId="K9GBA8" geneId="PDIG_03850"/>
        <gene id="7114" protId="K9G4Q5" geneId="PDIG_18410"/>
        <gene id="7116" protId="K9G3J2" geneId="PDIG_19610"/>
        <gene id="7118" protId="K9GEX2" geneId="PDIG_39150"/>
        <gene id="7120" protId="K9GKP9" geneId="PDIG_27260"/>
        <gene id="7122" protId="K9GYV1" geneId="PDIG_11040"/>
        <gene id="7124" protId="K9G6B7" geneId="PDIG_20750"/>
        <gene id="7126" protId="K9G5N6" geneId="PDIG_58440"/>
        <gene id="7128" protId="K9FND2" geneId="PDIG_90200"/>
        <gene id="7130" protId="K9GMJ4" geneId="PDIG_22630"/>
        <gene id="7136" protId="K9H392" geneId="PDIG_01790"/>
        <gene id="7138" protId="K9FAV6" geneId="PDIG_84630"/>
        <gene id="7140" protId="K9FK35" geneId="PDIG_59550"/>
        <gene id="7142" protId="K9FRL5" geneId="PDIG_46350"/>
        <gene id="7144" protId="K9FZ27" geneId="PDIG_30190"/>
        <gene id="7146" protId="K9FR93" geneId="PDIG_45400"/>
        <gene id="7148" protId="K9FR98" geneId="PDIG_53700"/>
        <gene id="7150" protId="K9GAC7" geneId="PDIG_11950"/>
        <gene id="7152" protId="K9FHY7" geneId="PDIG_66980"/>
        <gene id="7154" protId="K9GJU7" geneId="PDIG_38580"/>
        <gene id="7156" protId="K9G832" geneId="PDIG_63110"/>
        <gene id="7158" protId="K9FVZ0" geneId="PDIG_39210"/>
        <gene id="7160" protId="K9G258" geneId="PDIG_26820"/>
        <gene id="7162" protId="K9FPR4" geneId="PDIG_48910"/>
        <gene id="7169" protId="K9GAC3" geneId="PDIG_48420"/>
        <gene id="7170" protId="K9FU20" geneId="PDIG_42300"/>
        <gene id="7172" protId="K9FB73" geneId="PDIG_77710"/>
        <gene id="7174" protId="K9FK84" geneId="PDIG_59020"/>
        <gene id="7176" protId="K9FWS1" geneId="PDIG_34510"/>
        <gene id="7178" protId="K9G3K5" geneId="PDIG_25980"/>
        <gene id="7180" protId="K9GH56" geneId="PDIG_43200"/>
        <gene id="7187" protId="K9GMZ2" geneId="PDIG_22090"/>
        <gene id="7188" protId="K9FP65" geneId="PDIG_58780"/>
        <gene id="7193" protId="K9FN79" geneId="PDIG_90820"/>
        <gene id="7196" protId="K9FPJ7" geneId="PDIG_49310"/>
        <gene id="7198" protId="K9FFU1" geneId="PDIG_75310"/>
        <gene id="7200" protId="K9G6T5" geneId="PDIG_67550"/>
        <gene id="7202" protId="K9FGI9" geneId="PDIG_64790"/>
        <gene id="7204" protId="K9FXW8" geneId="PDIG_80680"/>
        <gene id="7206" protId="K9H372" geneId="PDIG_02020"/>
        <gene id="7208" protId="K9FYB7" geneId="PDIG_37310"/>
        <gene id="7210" protId="K9FWD7" geneId="PDIG_38360"/>
        <gene id="7212" protId="K9G223" geneId="PDIG_67570"/>
        <gene id="7214" protId="K9FA91" geneId="PDIG_86010"/>
        <gene id="7216" protId="K9FJM5" geneId="PDIG_68270"/>
        <gene id="7218" protId="K9FNM7" geneId="PDIG_51900"/>
        <gene id="7220" protId="K9FTV3" geneId="PDIG_79760"/>
        <gene id="7222" protId="K9GKQ6" geneId="PDIG_36150"/>
        <gene id="7224" protId="K9FXD1" geneId="PDIG_33460"/>
        <gene id="7226" protId="K9G6C4" geneId="PDIG_18700"/>
        <gene id="7228" protId="K9GC29" geneId="PDIG_02870"/>
        <gene id="7230" protId="K9G7E6" geneId="PDIG_15980"/>
        <gene id="7236" protId="K9F8H1" geneId="PDIG_89870"/>
        <gene id="7238" protId="K9FAT8" geneId="PDIG_77370"/>
        <gene id="7240" protId="K9FPX9" geneId="PDIG_56760"/>
        <gene id="7242" protId="K9FLX2" geneId="PDIG_62320"/>
        <gene id="7244" protId="K9F588" geneId="PDIG_89510"/>
        <gene id="7246" protId="K9GA21" geneId="PDIG_58770"/>
        <gene id="7248" protId="K9FNX0" geneId="PDIG_53620"/>
        <gene id="7250" protId="K9G946" geneId="PDIG_60170"/>
        <gene id="7252" protId="K9GXM4" geneId="PDIG_13270"/>
        <gene id="7254" protId="K9FWV5" geneId="PDIG_74620"/>
        <gene id="7258" protId="K9FH99" geneId="PDIG_67090"/>
        <gene id="7262" protId="K9FTA6" geneId="PDIG_81900"/>
        <gene id="7264" protId="K9G731" geneId="PDIG_64260"/>
        <gene id="7265" protId="K9FR43" geneId="PDIG_53250"/>
        <gene id="7268" protId="K9G9H1" geneId="PDIG_59460"/>
        <gene id="7270" protId="K9FKF3" geneId="PDIG_60420"/>
        <gene id="7272" protId="K9FVY2" geneId="PDIG_41480"/>
        <gene id="7274" protId="K9G5Q3" geneId="PDIG_19280"/>
        <gene id="7276" protId="K9FZY5" geneId="PDIG_27700"/>
        <gene id="7278" protId="K9GEM0" geneId="PDIG_48580"/>
        <gene id="7280" protId="K9GHX1" geneId="PDIG_41400"/>
        <gene id="7282" protId="K9FLI6" geneId="PDIG_57900"/>
        <gene id="7286" protId="K9G402" geneId="PDIG_22250"/>
        <gene id="7289" protId="K9FD22" geneId="PDIG_74230"/>
        <gene id="7291" protId="K9F6B7" geneId="PDIG_86610"/>
        <gene id="7293" protId="K9FJ09" geneId="PDIG_61150"/>
        <gene id="7295" protId="K9FR24" geneId="PDIG_84540"/>
        <gene id="7297" protId="K9GX70" geneId="PDIG_03680"/>
        <gene id="7299" protId="K9GAR6" geneId="PDIG_05420"/>
        <gene id="7301" protId="K9GY67" geneId="PDIG_12690"/>
        <gene id="7303" protId="K9G9M9" geneId="PDIG_49540"/>
        <gene id="7305" protId="K9GYI7" geneId="PDIG_01600"/>
        <gene id="7312" protId="K9GWV8" geneId="PDIG_05950"/>
        <gene id="7314" protId="K9G6M4" geneId="PDIG_16910"/>
        <gene id="7315" protId="K9F5I9" geneId="PDIG_88370"/>
        <gene id="7317" protId="K9G688" geneId="PDIG_15540"/>
        <gene id="7318" protId="K9FS35" geneId="PDIG_47330"/>
        <gene id="7320" protId="K9FXR6" geneId="PDIG_32340"/>
        <gene id="7322" protId="K9G3N4" geneId="PDIG_23140"/>
        <gene id="7324" protId="K9GI23" geneId="PDIG_41210"/>
        <gene id="7326" protId="K9FZY8" geneId="PDIG_31420"/>
        <gene id="7328" protId="K9F7Z7" geneId="PDIG_83030"/>
        <gene id="7342" protId="K9GC01" geneId="PDIG_02190"/>
        <gene id="7343" protId="K9FTL4" geneId="PDIG_89660"/>
        <gene id="7344" protId="K9GXG9" geneId="PDIG_03330"/>
        <gene id="7345" protId="K9GNY7" geneId="PDIG_20990"/>
        <gene id="7346" protId="K9G670" geneId="PDIG_20980"/>
        <gene id="7349" protId="K9FY62" geneId="PDIG_31280"/>
        <gene id="7350" protId="K9F5V6" geneId="PDIG_87470"/>
        <gene id="7352" protId="K9G6X1" geneId="PDIG_13600"/>
        <gene id="7353" protId="K9GSB1" geneId="PDIG_23210"/>
        <gene id="7356" protId="K9FG33" geneId="PDIG_69590"/>
        <gene id="7358" protId="K9FYM2" geneId="PDIG_79190"/>
        <gene id="7359" protId="K9FLP1" geneId="PDIG_63350"/>
        <gene id="7361" protId="K9FQN8" geneId="PDIG_85190"/>
        <gene id="7363" protId="K9G0W5" geneId="PDIG_25050"/>
        <gene id="7365" protId="K9G689" geneId="PDIG_66450"/>
        <gene id="7367" protId="K9H337" geneId="PDIG_02450"/>
        <gene id="7369" protId="K9FV48" geneId="PDIG_40580"/>
        <gene id="7371" protId="K9FCQ3" geneId="PDIG_75330"/>
        <gene id="7373" protId="K9FXJ3" geneId="PDIG_72390"/>
        <gene id="7375" protId="K9G8C9" geneId="PDIG_11330"/>
        <gene id="7377" protId="K9FTU5" geneId="PDIG_79710"/>
        <gene id="7379" protId="K9G9G3" geneId="PDIG_08890"/>
        <gene id="7381" protId="K9H1R2" geneId="PDIG_05830"/>
        <gene id="7383" protId="K9FL79" geneId="PDIG_64370"/>
        <gene id="7386" protId="K9GCZ8" geneId="PDIG_43040"/>
        <gene id="7388" protId="K9FT84" geneId="PDIG_48640"/>
        <gene id="7389" protId="K9G074" geneId="PDIG_68680"/>
        <gene id="7392" protId="K9GE28" geneId="PDIG_03390"/>
        <gene id="7394" protId="K9FNE8" geneId="PDIG_54750"/>
        <gene id="7396" protId="K9FE56" geneId="PDIG_73200"/>
        <gene id="7398" protId="K9GA75" geneId="PDIG_48070"/>
        <gene id="7400" protId="K9GJ31" geneId="PDIG_31710"/>
        <gene id="7402" protId="K9G4U2" geneId="PDIG_22770"/>
        <gene id="7404" protId="K9G9F0" geneId="PDIG_50160"/>
        <gene id="7406" protId="K9G0S2" geneId="PDIG_33030"/>
        <gene id="7408" protId="K9GK67" geneId="PDIG_27990"/>
        <gene id="7410" protId="K9FSD7" geneId="PDIG_46890"/>
        <gene id="7412" protId="K9FZU9" geneId="PDIG_31020"/>
        <gene id="7414" protId="K9H334" geneId="PDIG_02400"/>
        <gene id="7416" protId="K9FW02" geneId="PDIG_39310"/>
        <gene id="7418" protId="K9G9Z9" geneId="PDIG_12800"/>
        <gene id="7420" protId="K9GN94" geneId="PDIG_21620"/>
        <gene id="7422" protId="K9FCR7" geneId="PDIG_80790"/>
        <gene id="7424" protId="K9H2Y2" geneId="PDIG_02630"/>
        <gene id="7426" protId="K9GGY0" geneId="PDIG_44150"/>
        <gene id="7428" protId="K9H1E1" geneId="PDIG_06790"/>
        <gene id="7432" protId="K9GC17" geneId="PDIG_02670"/>
        <gene id="7433" protId="K9FS47" geneId="PDIG_44190"/>
        <gene id="7435" protId="K9FR39" geneId="PDIG_84690"/>
        <gene id="7437" protId="K9FE48" geneId="PDIG_73050"/>
        <gene id="7439" protId="K9FTE5" geneId="PDIG_48060"/>
        <gene id="7441" protId="K9GB64" geneId="PDIG_10320"/>
        <gene id="7443" protId="K9FMC1" geneId="PDIG_62110"/>
        <gene id="7445" protId="K9FGY3" geneId="PDIG_72330"/>
        <gene id="7447" protId="K9FSU0" geneId="PDIG_41510"/>
        <gene id="7449" protId="K9FJY9" geneId="PDIG_61840"/>
        <gene id="7450" protId="K9G561" geneId="PDIG_69160"/>
        <gene id="7452" protId="K9FK76" geneId="PDIG_60780"/>
        <gene id="7454" protId="K9GJX8" geneId="PDIG_29040"/>
        <gene id="7456" protId="K9GR55" geneId="PDIG_24910"/>
        <gene id="7458" protId="K9H2L5" geneId="PDIG_03240"/>
        <gene id="7463" protId="K9FEF8" geneId="PDIG_76690"/>
        <gene id="7465" protId="K9G706" geneId="PDIG_63910"/>
        <gene id="7466" protId="K9H1M1" geneId="PDIG_05230"/>
        <gene id="7468" protId="K9GCW6" geneId="PDIG_05190"/>
        <gene id="7470" protId="K9FW01" geneId="PDIG_41680"/>
        <gene id="7472" protId="K9FJ99" geneId="PDIG_62790"/>
        <gene id="7474" protId="K9GU65" geneId="PDIG_11060"/>
        <gene id="7477" protId="K9G6Z4" geneId="PDIG_19110"/>
        <gene id="7479" protId="K9FAP0" geneId="PDIG_78150"/>
        <gene id="7481" protId="K9GIC0" geneId="PDIG_32840"/>
        <gene id="7483" protId="K9F7V1" geneId="PDIG_90990"/>
        <gene id="7485" protId="K9F7T0" geneId="PDIG_84970"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="P.digitatum" link="http://www.uniprot.org/taxonomy/1170229"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
  </scores>
  <groups>
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      <score id="bit" value="3800"/>
      <geneRef id="1">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="2">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="2">
      <score id="bit" value="3496"/>
      <geneRef id="3">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="4">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="3">
      <score id="bit" value="2961"/>
      <geneRef id="5">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="6">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="4">
      <score id="bit" value="2690"/>
      <geneRef id="7">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="8">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="5">
      <score id="bit" value="2463"/>
      <geneRef id="9">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="10">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="6">
      <score id="bit" value="2397"/>
      <geneRef id="11">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="12">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="7">
      <score id="bit" value="2231"/>
      <geneRef id="13">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="14">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="8">
      <score id="bit" value="2087"/>
      <geneRef id="15">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="16">
        <score id="inparalog" value="0.383"/>
      </geneRef>
      <geneRef id="17">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="9">
      <score id="bit" value="2087"/>
      <geneRef id="18">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="19">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="10">
      <score id="bit" value="2075"/>
      <geneRef id="20">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="21">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="11">
      <score id="bit" value="2000"/>
      <geneRef id="22">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="23">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
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