<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="310" inparalogs="794"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Korarchaeum cryptofilum " NCBITaxId="374847">
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    </database>
    <notes>
      <additionalInformation abbreviation="K.cryptofilum" link="http://www.uniprot.org/taxonomy/374847"/>
    </notes>
  </species>
  <species name="Metarhizium acridum " NCBITaxId="655827">
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        <gene id="425" protId="E9EIW2" geneId="MAC_09810"/>
        <gene id="427" protId="E9EFK4" geneId="MAC_08652"/>
        <gene id="428" protId="E9E223" geneId="MAC_03921"/>
        <gene id="430" protId="E9E407" geneId="MAC_04605"/>
        <gene id="432" protId="E9E6D6" geneId="MAC_05434"/>
        <gene id="434" protId="E9E657" geneId="MAC_05355"/>
        <gene id="436" protId="E9EE39" geneId="MAC_08137"/>
        <gene id="438" protId="E9EE56" geneId="MAC_08154"/>
        <gene id="441" protId="E9DWW8" geneId="MAC_02116"/>
        <gene id="442" protId="E9EHV7" geneId="MAC_09455"/>
        <gene id="443" protId="E9E3P7" geneId="MAC_04491"/>
        <gene id="444" protId="E9DUD8" geneId="MAC_01236"/>
        <gene id="447" protId="E9EG16" geneId="MAC_08814"/>
        <gene id="449" protId="E9E7L5" geneId="MAC_05863"/>
        <gene id="450" protId="E9DR32" geneId="MAC_00201"/>
        <gene id="452" protId="E9E0Q3" geneId="MAC_03451"/>
        <gene id="454" protId="E9E351" geneId="MAC_04299"/>
        <gene id="456" protId="E9E0M5" geneId="MAC_03423"/>
        <gene id="458" protId="E9EA68" geneId="MAC_06766"/>
        <gene id="459" protId="E9E576" geneId="MAC_05045"/>
        <gene id="460" protId="E9E6E7" geneId="MAC_05445"/>
        <gene id="462" protId="E9DZM1" geneId="MAC_03069"/>
        <gene id="463" protId="E9E4G9" geneId="MAC_04767"/>
        <gene id="465" protId="E9DZ58" geneId="MAC_02906"/>
        <gene id="467" protId="E9DVK3" geneId="MAC_01651"/>
        <gene id="469" protId="E9DYP5" geneId="MAC_02742"/>
        <gene id="471" protId="E9EAK3" geneId="MAC_06901"/>
        <gene id="473" protId="E9ECV3" geneId="MAC_07701"/>
        <gene id="475" protId="E9E2X3" geneId="MAC_04221"/>
        <gene id="477" protId="E9DW04" geneId="MAC_01802"/>
        <gene id="479" protId="E9EE06" geneId="MAC_08104"/>
        <gene id="481" protId="E9EEP9" geneId="MAC_08347"/>
        <gene id="483" protId="E9E120" geneId="MAC_03568"/>
        <gene id="485" protId="E9E6C4" geneId="MAC_05422"/>
        <gene id="487" protId="E9EEP4" geneId="TIF6"/>
        <gene id="489" protId="E9EDZ3" geneId="MAC_08091"/>
        <gene id="491" protId="E9DSW1" geneId="MAC_00709"/>
        <gene id="492" protId="E9DWX8" geneId="MAC_02126"/>
        <gene id="494" protId="E9E748" geneId="MAC_05696"/>
        <gene id="496" protId="E9EDG2" geneId="MAC_07910"/>
        <gene id="497" protId="E9E4A4" geneId="MAC_04702"/>
        <gene id="500" protId="E9EDE4" geneId="MAC_07892"/>
        <gene id="502" protId="E9EFD0" geneId="MAC_08578"/>
        <gene id="504" protId="E9DYP0" geneId="MAC_02737"/>
        <gene id="505" protId="E9DV56" geneId="pepP"/>
        <gene id="507" protId="E9EGD5" geneId="MAC_08933"/>
        <gene id="508" protId="E9E331" geneId="MAC_04279"/>
        <gene id="510" protId="E9E6R0" geneId="MAC_05558"/>
        <gene id="512" protId="E9E9T7" geneId="MAC_06635"/>
        <gene id="514" protId="E9EEV3" geneId="MAC_08401"/>
        <gene id="515" protId="E9E6K1" geneId="MAC_05499"/>
        <gene id="517" protId="E9DTZ4" geneId="MAC_01092"/>
        <gene id="519" protId="E9EE50" geneId="MAC_08148"/>
        <gene id="521" protId="E9E0L3" geneId="MAC_03411"/>
        <gene id="523" protId="E9E397" geneId="MAC_04345"/>
        <gene id="525" protId="E9ECD7" geneId="MAC_07535"/>
        <gene id="527" protId="E9ED71" geneId="MAC_07819"/>
        <gene id="530" protId="E9EDI7" geneId="MAC_07935"/>
        <gene id="532" protId="E9E5C4" geneId="MAC_05072"/>
        <gene id="534" protId="E9DSX1" geneId="MAC_00719"/>
        <gene id="536" protId="E9DXP5" geneId="MAC_02393"/>
        <gene id="538" protId="E9E849" geneId="MAC_06047"/>
        <gene id="540" protId="E9DRU6" geneId="MAC_00019"/>
        <gene id="542" protId="E9DTT9" geneId="MAC_01037"/>
        <gene id="544" protId="E9DRL5" geneId="MAC_00384"/>
        <gene id="546" protId="E9DZS3" geneId="MAC_03121"/>
        <gene id="566" protId="E9E2I2" geneId="MAC_04080"/>
        <gene id="568" protId="E9E9A3" geneId="MAC_06451"/>
        <gene id="570" protId="E9EA99" geneId="MAC_06798"/>
        <gene id="572" protId="E9ECW3" geneId="MAC_07711"/>
        <gene id="573" protId="E9E1J6" geneId="MAC_03744"/>
        <gene id="574" protId="E9E7H7" geneId="MAC_05825"/>
        <gene id="575" protId="E9E6E6" geneId="MAC_05444"/>
        <gene id="577" protId="E9DXK6" geneId="MAC_02354"/>
        <gene id="579" protId="E9DXP6" geneId="MAC_02394"/>
        <gene id="581" protId="E9E1J7" geneId="MAC_03745"/>
        <gene id="583" protId="E9E9M7" geneId="MAC_06575"/>
        <gene id="585" protId="E9EFR2" geneId="MAC_08710"/>
        <gene id="586" protId="E9DZM6" geneId="MAC_03074"/>
        <gene id="587" protId="E9DRE7" geneId="MAC_00316"/>
        <gene id="588" protId="E9EIS0" geneId="MAC_09768"/>
        <gene id="589" protId="E9E2I1" geneId="MAC_04079"/>
        <gene id="590" protId="E9E8W7" geneId="MAC_06315"/>
        <gene id="591" protId="E9EAF6" geneId="MAC_06854"/>
        <gene id="592" protId="E9EC58" geneId="MAC_07467"/>
        <gene id="593" protId="E9EAZ0" geneId="MAC_07038"/>
        <gene id="594" protId="E9EG73" geneId="MAC_08871"/>
        <gene id="595" protId="E9DWP7" geneId="MAC_02045"/>
        <gene id="596" protId="E9DU05" geneId="MAC_01103"/>
        <gene id="597" protId="E9DRS5" geneId="MAC_00444"/>
        <gene id="598" protId="E9DVY1" geneId="MAC_01779"/>
        <gene id="599" protId="E9E9N8" geneId="MAC_06586"/>
        <gene id="600" protId="E9E302" geneId="MAC_04250"/>
        <gene id="602" protId="E9EI56" geneId="MAC_09554"/>
        <gene id="603" protId="E9EB73" geneId="MAC_07121"/>
        <gene id="605" protId="E9E9L0" geneId="MAC_06558"/>
        <gene id="607" protId="E9EGI4" geneId="MAC_08982"/>
        <gene id="609" protId="E9EG39" geneId="MAC_08837"/>
        <gene id="611" protId="E9EIG4" geneId="MAC_09662"/>
        <gene id="612" protId="E9DUK9" geneId="MAC_01307"/>
        <gene id="614" protId="E9ECV2" geneId="MAC_07700"/>
        <gene id="616" protId="E9DUK2" geneId="MAC_01300"/>
        <gene id="618" protId="E9E6V3" geneId="MAC_05601"/>
        <gene id="620" protId="E9EGR4" geneId="MAC_09062"/>
        <gene id="622" protId="E9DWK5" geneId="MAC_02003"/>
        <gene id="624" protId="E9DW73" geneId="MAC_01871"/>
        <gene id="626" protId="E9EH83" geneId="MAC_09231"/>
        <gene id="628" protId="E9E4U1" geneId="MAC_04889"/>
        <gene id="630" protId="E9EEX5" geneId="MAC_08423"/>
        <gene id="632" protId="E9EIC3" geneId="MAC_09621"/>
        <gene id="634" protId="E9DYE9" geneId="MAC_02646"/>
        <gene id="635" protId="E9EDP4" geneId="MAC_07992"/>
        <gene id="637" protId="E9E8B7" geneId="MAC_06115"/>
        <gene id="639" protId="E9EFI4" geneId="MAC_08632"/>
        <gene id="653" protId="E9E5F7" geneId="MAC_05105"/>
        <gene id="655" protId="E9E7X5" geneId="MAC_05973"/>
        <gene id="657" protId="E9DYQ6" geneId="MAC_02753"/>
        <gene id="658" protId="E9E125" geneId="MAC_03573"/>
        <gene id="659" protId="E9EE93" geneId="MAC_08191"/>
        <gene id="661" protId="E9DU31" geneId="MAC_01129"/>
        <gene id="662" protId="E9DZ64" geneId="MAC_02912"/>
        <gene id="665" protId="E9E5I3" geneId="MAC_05131"/>
        <gene id="667" protId="E9DS47" geneId="MAC_00120"/>
        <gene id="669" protId="E9DT31" geneId="MAC_00913"/>
        <gene id="671" protId="E9E615" geneId="MAC_05313"/>
        <gene id="673" protId="E9E8N2" geneId="MAC_06247"/>
        <gene id="675" protId="E9EFV9" geneId="MAC_08757"/>
        <gene id="677" protId="E9EIJ5" geneId="MAC_09693"/>
        <gene id="679" protId="E9DRH9" geneId="MAC_00348"/>
        <gene id="681" protId="E9DWE9" geneId="MAC_01947"/>
        <gene id="683" protId="E9E0M0" geneId="MAC_03418"/>
        <gene id="685" protId="E9EBG6" geneId="MAC_07214"/>
        <gene id="688" protId="E9DZ83" geneId="MAC_02931"/>
        <gene id="690" protId="E9DVK2" geneId="MAC_01650"/>
        <gene id="692" protId="E9EHB3" geneId="MAC_09261"/>
        <gene id="693" protId="E9E424" geneId="MAC_04622"/>
        <gene id="694" protId="E9E6H9" geneId="MAC_05477"/>
        <gene id="695" protId="E9EFJ5" geneId="MAC_08643"/>
        <gene id="696" protId="E9DZW0" geneId="MAC_03158"/>
        <gene id="697" protId="E9ECL5" geneId="MAC_07613"/>
        <gene id="698" protId="E9DTI4" geneId="MAC_00822"/>
        <gene id="699" protId="E9DXT3" geneId="MAC_02431"/>
        <gene id="701" protId="E9DTM0" geneId="MAC_00858"/>
        <gene id="703" protId="E9DY89" geneId="MAC_02587"/>
        <gene id="705" protId="E9E796" geneId="SEC11"/>
        <gene id="707" protId="E9EAI2" geneId="MAC_06880"/>
        <gene id="709" protId="E9EII3" geneId="MAC_09681"/>
        <gene id="711" protId="E9E109" geneId="MAC_03557"/>
        <gene id="712" protId="E9E5S5" geneId="MAC_05223"/>
        <gene id="713" protId="E9E4X9" geneId="MAC_04927"/>
        <gene id="714" protId="E9DYZ5" geneId="MAC_02843"/>
        <gene id="716" protId="E9E3T5" geneId="MAC_04533"/>
        <gene id="720" protId="E9E0T3" geneId="MAC_03481"/>
        <gene id="722" protId="E9EAG9" geneId="MAC_06867"/>
        <gene id="723" protId="E9EBD1" geneId="MAC_07179"/>
        <gene id="725" protId="E9EH89" geneId="MAC_09237"/>
        <gene id="726" protId="E9E5Y4" geneId="MAC_05282"/>
        <gene id="728" protId="E9DUI2" geneId="MAC_01280"/>
        <gene id="730" protId="E9E9A6" geneId="RPS1"/>
        <gene id="733" protId="E9EBS5" geneId="MAC_07323"/>
        <gene id="735" protId="E9DSY2" geneId="MAC_00730"/>
        <gene id="737" protId="E9E3C4" geneId="MAC_04372"/>
        <gene id="739" protId="E9EDQ1" geneId="MAC_07999"/>
        <gene id="741" protId="E9EEJ2" geneId="MAC_08290"/>
        <gene id="743" protId="E9E015" geneId="MAC_03213"/>
        <gene id="745" protId="E9E7E1" geneId="MAC_05789"/>
        <gene id="747" protId="E9E1I2" geneId="MAC_03730"/>
        <gene id="748" protId="E9E1B9" geneId="MAC_03667"/>
        <gene id="750" protId="E9EA88" geneId="MAC_06786"/>
        <gene id="751" protId="E9E3T7" geneId="MAC_04535"/>
        <gene id="753" protId="E9EC08" geneId="MAC_07406"/>
        <gene id="755" protId="E9EFH8" geneId="MAC_08626"/>
        <gene id="757" protId="E9DVM9" geneId="MAC_01677"/>
        <gene id="759" protId="E9E895" geneId="MAC_06093"/>
        <gene id="761" protId="E9DXY5" geneId="MAC_02483"/>
        <gene id="762" protId="E9ECC6" geneId="MAC_07524"/>
        <gene id="764" protId="E9DUI3" geneId="MAC_01281"/>
        <gene id="766" protId="E9DVB9" geneId="MAC_01567"/>
        <gene id="768" protId="E9DZR1" geneId="MAC_03109"/>
        <gene id="770" protId="E9DST8" geneId="MAC_00686"/>
        <gene id="771" protId="E9EAM6" geneId="MAC_06924"/>
        <gene id="772" protId="E9EAM4" geneId="MAC_06922"/>
        <gene id="774" protId="E9E831" geneId="MAC_06029"/>
        <gene id="776" protId="E9E803" geneId="MAC_06001"/>
        <gene id="779" protId="E9DZU6" geneId="MAC_03144"/>
        <gene id="780" protId="E9E515" geneId="MAC_04963"/>
        <gene id="781" protId="E9EBJ1" geneId="MAC_07239"/>
        <gene id="782" protId="E9EC20" geneId="MAC_07418"/>
        <gene id="785" protId="E9E1L7" geneId="MAC_03765"/>
        <gene id="786" protId="E9DYB4" geneId="MAC_02612"/>
        <gene id="788" protId="E9EE42" geneId="MAC_08140"/>
        <gene id="790" protId="E9DWN5" geneId="MAC_02033"/>
        <gene id="792" protId="E9EGV2" geneId="MAC_09100"/>
        <gene id="794" protId="E9DUQ8" geneId="MAC_01356"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="M.acridum" link="http://www.uniprot.org/taxonomy/655827"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
  </scores>
  <groups>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.99"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="2">
      <score id="bit" value="681"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="4">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.73"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="3">
      <score id="bit" value="641"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="6">
        <score id="inparalog" value="0.292"/>
      </geneRef>
      <geneRef id="7">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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    <orthologGroup id="4">
      <score id="bit" value="550"/>
      <geneRef id="8">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="9">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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    <orthologGroup id="5">
      <score id="bit" value="524"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <score id="bit" value="519"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <score id="bit" value="498"/>
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        <score id="bootstrap" value="1"/>
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      <geneRef id="15">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.99"/>
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        <score id="bootstrap" value="0.99"/>
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        <score id="bootstrap" value="0.99"/>
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      <geneRef id="23">
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        <score id="bootstrap" value="0.99"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="0.9"/>
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        <score id="bootstrap" value="0.56"/>
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        <score id="bootstrap" value="0.86"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="0.99"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.59"/>
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      <score id="bit" value="344"/>
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        <score id="bootstrap" value="1"/>
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      <geneRef id="46">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="22">
      <score id="bit" value="336"/>
      <geneRef id="47">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="48">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
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