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  </notes>
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    <notes>
      <additionalInformation abbreviation="I.scapularis" link="http://www.uniprot.org/taxonomy/6945"/>
    </notes>
  </species>
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        <gene id="812" protId="Q55689" geneId="rfbA"/>
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        <gene id="1083" protId="Q55506" geneId="ruvC"/>
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        <gene id="1087" protId="P73648" geneId="glmM"/>
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        <gene id="1093" protId="P72715" geneId="phoA"/>
        <gene id="1095" protId="P73161" geneId="trmB"/>
        <gene id="1097" protId="Q6ZEK8" geneId="sll5122"/>
        <gene id="1099" protId="P74309" geneId="fda"/>
        <gene id="1101" protId="P74235" geneId="sll1094"/>
        <gene id="1102" protId="P72572" geneId="ssl0769"/>
        <gene id="1103" protId="P97152" geneId="ssr1176"/>
        <gene id="1104" protId="P72693" geneId="ssl0426"/>
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        <gene id="1108" protId="P73384" geneId="slr1827"/>
        <gene id="1109" protId="P73115" geneId="slr1917"/>
        <gene id="1110" protId="P73482" geneId="slr1235"/>
        <gene id="1113" protId="P74368" geneId="rnc1"/>
        <gene id="1114" protId="Q55637" geneId="rnc2"/>
        <gene id="1116" protId="P74200" geneId="pbp"/>
        <gene id="1118" protId="P48946" geneId="rpsR"/>
        <gene id="1120" protId="P73989" geneId="slr2122"/>
        <gene id="1122" protId="P72907" geneId="slr1071"/>
        <gene id="1124" protId="Q55381" geneId="slr0920"/>
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        <gene id="1129" protId="P73741" geneId="rimI"/>
        <gene id="1131" protId="P73307" geneId="rpsH"/>
        <gene id="1133" protId="P54691" geneId="ilvE"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="Synechocystis.sp." link="http://www.uniprot.org/taxonomy/1111708"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
  </scores>
  <groups>
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      <geneRef id="1">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="2">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="3">
        <score id="inparalog" value="0.088"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="2">
      <score id="bit" value="922"/>
      <geneRef id="4">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="5">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="3">
      <score id="bit" value="809"/>
      <geneRef id="6">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="7">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="4">
      <score id="bit" value="795"/>
      <geneRef id="8">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="9">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
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