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  <notes>
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    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
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    <notes>
      <additionalInformation abbreviation="H.saltator" link="http://www.uniprot.org/taxonomy/610380"/>
    </notes>
  </species>
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        <gene id="10708" protId="H9H171" geneId="LOC100548070"/>
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        <gene id="11127" protId="G1MSM2" geneId="LDLRAP1"/>
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        <gene id="11146" protId="G1NGI6" geneId="LOC100540795"/>
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        <gene id="11160" protId="G1MSV2" geneId="LOC100551181"/>
        <gene id="11161" protId="G1N4X1" geneId="LOC100540079"/>
        <gene id="11162" protId="G1NNP3" geneId="LOC100539897"/>
        <gene id="11163" protId="G1MQ57" geneId="LOC100543543"/>
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        <gene id="11174" protId="G3UUP4" geneId="LOC100546331"/>
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        <gene id="11177" protId="G1NNL3" geneId="LOC100547818"/>
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        <gene id="11189" protId="G1MQS8" geneId="LOC100549167"/>
        <gene id="11191" protId="G1N2F2" geneId="uncharacterized_G1N2F2"/>
        <gene id="11193" protId="G3UP67" geneId="uncharacterized_G3UP67"/>
        <gene id="11195" protId="G1N6K8" geneId="uncharacterized_G1N6K8"/>
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        <gene id="11198" protId="G1N1L8" geneId="LOC100545531"/>
        <gene id="11199" protId="G1MSE4" geneId="LOC100547762"/>
        <gene id="11201" protId="G1N5Q3" geneId="MYOD1"/>
        <gene id="11202" protId="G1MTL2" geneId="LOC100303673"/>
        <gene id="11204" protId="G1MRU8" geneId="LOC100538687"/>
        <gene id="11206" protId="G1MZG1" geneId="uncharacterized_G1MZG1"/>
        <gene id="11208" protId="G1N468" geneId="LOC100538910"/>
        <gene id="11210" protId="G1NR59" geneId="uncharacterized_G1NR59"/>
        <gene id="11211" protId="G1NRR5" geneId="LOC100542061"/>
        <gene id="11213" protId="G1N3K8" geneId="uncharacterized_G1N3K8"/>
        <gene id="11215" protId="H9H0J7" geneId="uncharacterized_H9H0J7"/>
        <gene id="11217" protId="H9H0R9" geneId="LOC100540467"/>
        <gene id="11219" protId="B1N1C9" geneId="BLec1"/>
        <gene id="11220" protId="H9H1Y2" geneId="uncharacterized_H9H1Y2"/>
        <gene id="11221" protId="G1MUD8" geneId="LOC100538560"/>
        <gene id="11222" protId="G3UQB1" geneId="uncharacterized_G3UQB1"/>
        <gene id="11223" protId="G1NN49" geneId="LOC100544943"/>
        <gene id="11225" protId="G1N7F6" geneId="LOC100540535"/>
        <gene id="11227" protId="G1NJN7" geneId="LOC100547573"/>
        <gene id="11229" protId="G3UPE9" geneId="LOC100542984"/>
        <gene id="11231" protId="G1NR09" geneId="LOC100551209"/>
        <gene id="11233" protId="G1NCU9" geneId="LOC100539723"/>
        <gene id="11235" protId="G1MXT4" geneId="LOC100550368"/>
        <gene id="11237" protId="G1NHY8" geneId="LOC100549107"/>
        <gene id="11239" protId="G1NR82" geneId="LOC100545382"/>
        <gene id="11241" protId="H9H106" geneId="DNMT1"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="M.gallopavo" link="http://www.uniprot.org/taxonomy/9103"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
  </scores>
  <groups>
    <orthologGroup id="1">
      <score id="bit" value="5776"/>
      <geneRef id="1">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="2">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="2">
      <score id="bit" value="5397"/>
      <geneRef id="3">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="4">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="3">
      <score id="bit" value="4645"/>
      <geneRef id="5">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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