<?xml version="1.0" encoding="utf-8"?>
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  <notes>
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    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
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    <notes>
      <additionalInformation abbreviation="D.plexippus" link="http://www.uniprot.org/taxonomy/13037"/>
    </notes>
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    <notes>
      <additionalInformation abbreviation="V.vinifera" link="http://www.uniprot.org/taxonomy/29760"/>
    </notes>
  </species>
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    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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        <score id="bootstrap" value="1"/>
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      <score id="bit" value="2101"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <score id="bit" value="2017"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="0.392"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="23">
        <score id="inparalog" value="0.586"/>
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      <geneRef id="24">
        <score id="inparalog" value="0.135"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <score id="bit" value="1177"/>
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        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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    <orthologGroup id="15">
      <score id="bit" value="1169"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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