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  <notes>
    <stats ortholog_groups="283" inparalogs="813"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Drosophila grimshawi " NCBITaxId="7222">
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        <gene id="800" protId="B4JWT1" geneId="DgriGH17815"/>
        <gene id="802" protId="B4JDG4" geneId="DgriGH11182"/>
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        <gene id="804" protId="B4IXI2" geneId="DgriGH16237"/>
        <gene id="806" protId="B4J0J7" geneId="DgriGH16488"/>
        <gene id="807" protId="B4J0J8" geneId="DgriGH16489"/>
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    <notes>
      <additionalInformation abbreviation="D.grimshawi" link="http://www.uniprot.org/taxonomy/7222"/>
    </notes>
  </species>
  <species name="Dictyoglomus turgidum " NCBITaxId="515635">
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        <gene id="175" protId="B8E1I7" geneId="Dtur_0183"/>
        <gene id="177" protId="B8E0I1" geneId="Dtur_1352"/>
        <gene id="179" protId="B8DZQ1" geneId="Dtur_0699"/>
        <gene id="182" protId="B8E0N6" geneId="argD"/>
        <gene id="184" protId="B8E0B2" geneId="obg"/>
        <gene id="186" protId="B8E045" geneId="Dtur_0847"/>
        <gene id="189" protId="B8E391" geneId="cysS"/>
        <gene id="191" protId="B8E1A0" geneId="smc"/>
        <gene id="193" protId="B8DZQ2" geneId="ldh"/>
        <gene id="195" protId="B8DZ90" geneId="Dtur_0533"/>
        <gene id="197" protId="B8E131" geneId="Dtur_1494"/>
        <gene id="199" protId="B8DYH7" geneId="dnaJ"/>
        <gene id="205" protId="B8E0P6" geneId="Dtur_1794"/>
        <gene id="207" protId="B8E290" geneId="clpP"/>
        <gene id="209" protId="B8E2G8" geneId="ffh"/>
        <gene id="211" protId="B8E0R9" geneId="serS"/>
        <gene id="213" protId="B8DYI6" geneId="Dtur_0030"/>
        <gene id="223" protId="B8E373" geneId="Dtur_1675"/>
        <gene id="228" protId="B8E367" geneId="Dtur_1669"/>
        <gene id="230" protId="B8DZS0" geneId="Dtur_0718"/>
        <gene id="234" protId="B8E1I5" geneId="Dtur_0181"/>
        <gene id="236" protId="B8E2W6" geneId="Dtur_1187"/>
        <gene id="238" protId="B8E0R2" geneId="Dtur_1811"/>
        <gene id="239" protId="B8DZB1" geneId="Dtur_0554"/>
        <gene id="241" protId="B8E0S0" geneId="Dtur_1383"/>
        <gene id="243" protId="B8DZ10" geneId="Dtur_0315"/>
        <gene id="245" protId="B8E1M7" geneId="Dtur_0223"/>
        <gene id="248" protId="B8E181" geneId="Dtur_0928"/>
        <gene id="250" protId="B8E196" geneId="Dtur_0943"/>
        <gene id="252" protId="B8E2R2" geneId="tpiA"/>
        <gene id="254" protId="B8E1F3" geneId="adk"/>
        <gene id="256" protId="B8DZ67" geneId="Dtur_0389"/>
        <gene id="258" protId="B8E2E5" geneId="gcvT"/>
        <gene id="260" protId="B8E335" geneId="folD"/>
        <gene id="269" protId="B8DZ83" geneId="Dtur_0523"/>
        <gene id="272" protId="B8E1Z0" geneId="Dtur_0473"/>
        <gene id="275" protId="B8E1S5" geneId="Dtur_0404"/>
        <gene id="277" protId="B8E1B4" geneId="gcp"/>
        <gene id="281" protId="B8E0M3" geneId="Dtur_1771"/>
        <gene id="284" protId="B8E2X0" geneId="leuC"/>
        <gene id="286" protId="B8E280" geneId="mutL"/>
        <gene id="288" protId="B8E0D4" geneId="Dtur_1305"/>
        <gene id="289" protId="B8DYU2" geneId="Dtur_0143"/>
        <gene id="291" protId="B8DZP1" geneId="mnmA"/>
        <gene id="294" protId="B8DYX9" geneId="Dtur_0280"/>
        <gene id="297" protId="B8E1F4" geneId="Dtur_1002"/>
        <gene id="299" protId="B8DYR7" geneId="mnmE"/>
        <gene id="301" protId="B8E281" geneId="miaA"/>
        <gene id="307" protId="B8E2X2" geneId="leuB"/>
        <gene id="309" protId="B8E1Y2" geneId="Dtur_0465"/>
        <gene id="320" protId="B8DZ84" geneId="Dtur_0524"/>
        <gene id="322" protId="B8DYJ6" geneId="Dtur_0040"/>
        <gene id="324" protId="B8DYI0" geneId="Dtur_0021"/>
        <gene id="326" protId="B8E0Z7" geneId="speE"/>
        <gene id="332" protId="B8E365" geneId="Dtur_1667"/>
        <gene id="333" protId="B8E1T6" geneId="Dtur_0415"/>
        <gene id="334" protId="B8E343" geneId="Dtur_1644"/>
        <gene id="335" protId="B8E1T2" geneId="Dtur_0411"/>
        <gene id="339" protId="B8E2T2" geneId="Dtur_1153"/>
        <gene id="345" protId="B8E151" geneId="Dtur_0898"/>
        <gene id="347" protId="B8E1U2" geneId="Dtur_0422"/>
        <gene id="348" protId="B8DYY5" geneId="Dtur_0288"/>
        <gene id="350" protId="B8E0X1" geneId="Dtur_1434"/>
        <gene id="352" protId="B8E283" geneId="hflX"/>
        <gene id="354" protId="B8E2X8" geneId="Dtur_1199"/>
        <gene id="356" protId="B8E0W0" geneId="Dtur_1423"/>
        <gene id="358" protId="B8DZ22" geneId="Dtur_0334"/>
        <gene id="359" protId="B8E331" geneId="Dtur_1632"/>
        <gene id="360" protId="B8E3F2" geneId="Dtur_1754"/>
        <gene id="362" protId="B8DZQ5" geneId="Dtur_0703"/>
        <gene id="367" protId="B8DZC8" geneId="Dtur_0572"/>
        <gene id="371" protId="B8DZV7" geneId="Dtur_0758"/>
        <gene id="374" protId="B8E0D3" geneId="Dtur_1304"/>
        <gene id="376" protId="B8E3E6" geneId="Dtur_1748"/>
        <gene id="381" protId="B8E173" geneId="Dtur_0920"/>
        <gene id="382" protId="B8E1K0" geneId="Dtur_0196"/>
        <gene id="385" protId="B8E2S6" geneId="Dtur_1147"/>
        <gene id="387" protId="B8DZB7" geneId="Dtur_0560"/>
        <gene id="389" protId="B8E088" geneId="rsmH"/>
        <gene id="395" protId="B8E2Z4" geneId="Dtur_1215"/>
        <gene id="397" protId="B8E127" geneId="tyrS"/>
        <gene id="399" protId="B8E0X6" geneId="fmt"/>
        <gene id="402" protId="B8DYU0" geneId="Dtur_0141"/>
        <gene id="404" protId="B8E063" geneId="Dtur_0865"/>
        <gene id="406" protId="B8E2E6" geneId="gcvH"/>
        <gene id="408" protId="B8E195" geneId="Dtur_0942"/>
        <gene id="410" protId="B8E282" geneId="Dtur_1080"/>
        <gene id="412" protId="B8E123" geneId="argS"/>
        <gene id="415" protId="B8DZJ0" geneId="Dtur_0638"/>
        <gene id="417" protId="B8E1C2" geneId="dtd"/>
        <gene id="421" protId="B8E2U0" geneId="gpsA"/>
        <gene id="423" protId="B8DZS2" geneId="Dtur_0720"/>
        <gene id="425" protId="B8DZW2" geneId="lipB"/>
        <gene id="428" protId="B8E239" geneId="Dtur_1036"/>
        <gene id="430" protId="B8E0U2" geneId="Dtur_1405"/>
        <gene id="432" protId="B8E2X5" geneId="Dtur_1196"/>
        <gene id="434" protId="B8E370" geneId="Dtur_1672"/>
        <gene id="436" protId="B8E098" geneId="Dtur_1265"/>
        <gene id="447" protId="B8DYQ1" geneId="Dtur_0095"/>
        <gene id="448" protId="B8DYL7" geneId="Dtur_0061"/>
        <gene id="449" protId="B8E256" geneId="Dtur_1053"/>
        <gene id="452" protId="B8DZB5" geneId="Dtur_0558"/>
        <gene id="453" protId="B8E385" geneId="Dtur_1687"/>
        <gene id="454" protId="B8E169" geneId="Dtur_0916"/>
        <gene id="457" protId="B8E009" geneId="upp"/>
        <gene id="459" protId="B8E1D6" geneId="rplB"/>
        <gene id="461" protId="B8DYS3" geneId="Dtur_0123"/>
        <gene id="463" protId="B8E081" geneId="coaE"/>
        <gene id="465" protId="B8E183" geneId="mtaD"/>
        <gene id="467" protId="B8E0D9" geneId="pheS"/>
        <gene id="469" protId="B8E1W5" geneId="Dtur_0446"/>
        <gene id="470" protId="B8DZN7" geneId="Dtur_0685"/>
        <gene id="472" protId="B8E1C9" geneId="rpsG"/>
        <gene id="474" protId="B8E0G5" geneId="Dtur_1336"/>
        <gene id="476" protId="B8E1C8" geneId="rpsL"/>
        <gene id="478" protId="B8E2J6" geneId="Dtur_1566"/>
        <gene id="479" protId="B8DYZ1" geneId="Dtur_0295"/>
        <gene id="480" protId="B8DYG9" geneId="Dtur_0010"/>
        <gene id="482" protId="B8E0Y0" geneId="Dtur_1443"/>
        <gene id="484" protId="B8E2Q5" geneId="Dtur_1626"/>
        <gene id="486" protId="B8E0K3" geneId="rplK"/>
        <gene id="488" protId="B8E129" geneId="rsmA"/>
        <gene id="490" protId="B8E1D3" geneId="rplC"/>
        <gene id="494" protId="B8DZJ1" geneId="Dtur_0639"/>
        <gene id="497" protId="B8E2F6" geneId="Dtur_1526"/>
        <gene id="499" protId="B8E2P4" geneId="Dtur_1615"/>
        <gene id="501" protId="B8E2P6" geneId="nnr"/>
        <gene id="507" protId="B8E1B9" geneId="Dtur_0967"/>
        <gene id="511" protId="B8E118" geneId="Dtur_1481"/>
        <gene id="515" protId="B8E0F3" geneId="Dtur_1324"/>
        <gene id="517" protId="B8E316" geneId="Dtur_1238"/>
        <gene id="519" protId="B8E2Y2" geneId="rpsB"/>
        <gene id="521" protId="B8E305" geneId="Dtur_1227"/>
        <gene id="528" protId="B8DZC7" geneId="Dtur_0571"/>
        <gene id="529" protId="B8DYP7" geneId="Dtur_0091"/>
        <gene id="533" protId="B8E1C1" geneId="hisS"/>
        <gene id="535" protId="B8E097" geneId="Dtur_1264"/>
        <gene id="537" protId="B8E1J3" geneId="Dtur_0189"/>
        <gene id="541" protId="B8E2K4" geneId="pyrC"/>
        <gene id="543" protId="B8E0A8" geneId="Dtur_1275"/>
        <gene id="547" protId="B8E1Q8" geneId="Dtur_0257"/>
        <gene id="549" protId="B8DZF6" geneId="Dtur_0601"/>
        <gene id="551" protId="B8E308" geneId="Dtur_1230"/>
        <gene id="553" protId="B8E0E0" geneId="Dtur_1311"/>
        <gene id="555" protId="B8E0V7" geneId="purL"/>
        <gene id="557" protId="B8E1F0" geneId="rpsE"/>
        <gene id="560" protId="B8E0X7" geneId="def"/>
        <gene id="562" protId="B8E2N0" geneId="Dtur_1601"/>
        <gene id="564" protId="B8E352" geneId="Dtur_1654"/>
        <gene id="566" protId="B8E029" geneId="dut"/>
        <gene id="568" protId="B8E344" geneId="Dtur_1645"/>
        <gene id="569" protId="B8E208" geneId="Dtur_0498"/>
        <gene id="571" protId="B8E307" geneId="Dtur_1229"/>
        <gene id="575" protId="B8E1X8" geneId="Dtur_0461"/>
        <gene id="577" protId="B8E2Q8" geneId="Dtur_1629"/>
        <gene id="578" protId="B8E2W9" geneId="leuA"/>
        <gene id="579" protId="B8E2X3" geneId="Dtur_1194"/>
        <gene id="581" protId="B8E2X4" geneId="Dtur_1195"/>
        <gene id="583" protId="B8E0L2" geneId="Dtur_1760"/>
        <gene id="585" protId="B8E1F8" geneId="rpsK"/>
        <gene id="587" protId="B8E222" geneId="glmM"/>
        <gene id="589" protId="B8E2L2" geneId="Dtur_1583"/>
        <gene id="591" protId="B8E0F2" geneId="era"/>
        <gene id="597" protId="B8E2D6" geneId="Dtur_1506"/>
        <gene id="600" protId="B8E004" geneId="prmC"/>
        <gene id="602" protId="B8E005" geneId="Dtur_0807"/>
        <gene id="604" protId="B8E301" geneId="Dtur_1222"/>
        <gene id="606" protId="B8E0G6" geneId="Dtur_1337"/>
        <gene id="608" protId="B8E0E1" geneId="rplT"/>
        <gene id="610" protId="B8E0T1" geneId="pcm"/>
        <gene id="612" protId="B8E0Q6" geneId="Dtur_1805"/>
        <gene id="616" protId="B8DYG2" geneId="Dtur_0003"/>
        <gene id="619" protId="B8E1B0" geneId="groS"/>
        <gene id="623" protId="B8E136" geneId="Dtur_1499"/>
        <gene id="625" protId="B8E2X9" geneId="frr"/>
        <gene id="647" protId="B8E082" geneId="uvrB"/>
        <gene id="650" protId="B8E200" geneId="tal"/>
        <gene id="652" protId="B8E1E3" geneId="rplN"/>
        <gene id="654" protId="B8E1G6" geneId="rplM"/>
        <gene id="657" protId="B8E2Q6" geneId="Dtur_1627"/>
        <gene id="659" protId="B8DZG9" geneId="Dtur_0614"/>
        <gene id="661" protId="B8E2Q1" geneId="Dtur_1622"/>
        <gene id="662" protId="B8E1B1" geneId="Dtur_0959"/>
        <gene id="663" protId="B8DYZ3" geneId="Dtur_0297"/>
        <gene id="666" protId="B8E2P1" geneId="ruvB"/>
        <gene id="668" protId="B8E2D9" geneId="Dtur_1509"/>
        <gene id="670" protId="B8DYU4" geneId="Dtur_0145"/>
        <gene id="672" protId="B8E1G5" geneId="truA"/>
        <gene id="674" protId="B8E1F7" geneId="rpsM"/>
        <gene id="676" protId="B8E0W3" geneId="Dtur_1426"/>
        <gene id="678" protId="B8DYT1" geneId="atpG"/>
        <gene id="681" protId="B8DYH5" geneId="grpE"/>
        <gene id="683" protId="B8E0B4" geneId="rplU"/>
        <gene id="685" protId="B8DZ49" geneId="Dtur_0371"/>
        <gene id="686" protId="B8E374" geneId="Dtur_1676"/>
        <gene id="688" protId="B8E0G7" geneId="rph"/>
        <gene id="690" protId="B8E2K2" geneId="pyrD"/>
        <gene id="692" protId="B8E1E5" geneId="rplE"/>
        <gene id="694" protId="B8E1D7" geneId="rpsS"/>
        <gene id="696" protId="B8E2G2" geneId="Dtur_1532"/>
        <gene id="698" protId="B8DZT1" geneId="Dtur_0731"/>
        <gene id="699" protId="B8E3B1" geneId="Dtur_1713"/>
        <gene id="701" protId="B8E1I6" geneId="Dtur_0182"/>
        <gene id="703" protId="B8E0B3" geneId="rpmA"/>
        <gene id="708" protId="B8DZZ3" geneId="Dtur_0795"/>
        <gene id="711" protId="B8E1S2" geneId="Dtur_0401"/>
        <gene id="712" protId="B8E0L3" geneId="Dtur_1761"/>
        <gene id="714" protId="B8E0J4" geneId="lysA"/>
        <gene id="716" protId="B8E0R3" geneId="Dtur_1812"/>
        <gene id="718" protId="B8E1D2" geneId="rpsJ"/>
        <gene id="720" protId="B8E372" geneId="Dtur_1674"/>
        <gene id="721" protId="B8E3A8" geneId="Dtur_1710"/>
        <gene id="724" protId="B8DYM9" geneId="Dtur_0073"/>
        <gene id="726" protId="B8DYX2" geneId="Dtur_0272"/>
        <gene id="731" protId="B8E006" geneId="Dtur_0808"/>
        <gene id="733" protId="B8E028" geneId="proS"/>
        <gene id="735" protId="B8E0R5" geneId="Dtur_1814"/>
        <gene id="737" protId="B8E1D9" geneId="rpsC"/>
        <gene id="739" protId="B8E2X7" geneId="Dtur_1198"/>
        <gene id="742" protId="B8E2T5" geneId="Dtur_1156"/>
        <gene id="743" protId="B8E2T6" geneId="Dtur_1157"/>
        <gene id="745" protId="B8E3D2" geneId="Dtur_1734"/>
        <gene id="746" protId="B8E1U4" geneId="Dtur_0424"/>
        <gene id="748" protId="B8DZY5" geneId="tmk"/>
        <gene id="750" protId="B8E2G7" geneId="rpsP"/>
        <gene id="752" protId="B8E1G7" geneId="rpsI"/>
        <gene id="754" protId="B8DZ45" geneId="Dtur_0360"/>
        <gene id="761" protId="B8DYM3" geneId="Dtur_0067"/>
        <gene id="762" protId="B8E0W4" geneId="Dtur_1427"/>
        <gene id="769" protId="B8DZ66" geneId="Dtur_0388"/>
        <gene id="770" protId="B8E1W1" geneId="Dtur_0442"/>
        <gene id="773" protId="B8E0F1" geneId="deoC"/>
        <gene id="775" protId="B8E1G1" geneId="rplQ"/>
        <gene id="777" protId="B8E0V1" geneId="Dtur_1414"/>
        <gene id="793" protId="B8E0I5" geneId="Dtur_1356"/>
        <gene id="795" protId="B8E0K2" geneId="rplA"/>
        <gene id="797" protId="B8E337" geneId="Dtur_1638"/>
        <gene id="799" protId="B8E1B5" geneId="Dtur_0963"/>
        <gene id="801" protId="B8E1E7" geneId="rpsH"/>
        <gene id="805" protId="B8E0G4" geneId="Dtur_1335"/>
        <gene id="811" protId="B8DZF5" geneId="Dtur_0600"/>
        <gene id="813" protId="B8E0J3" geneId="Dtur_1364"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="D.turgidum" link="http://www.uniprot.org/taxonomy/515635"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
  </scores>
  <groups>
    <orthologGroup id="1">
      <score id="bit" value="661"/>
      <geneRef id="1">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="2">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="2">
      <score id="bit" value="610"/>
      <geneRef id="3">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="4">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="3">
      <score id="bit" value="608"/>
      <geneRef id="5">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.92"/>
      </geneRef>
      <geneRef id="6">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="4">
      <score id="bit" value="562"/>
      <geneRef id="7">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="8">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="5">
      <score id="bit" value="542"/>
      <geneRef id="9">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="10">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="6">
      <score id="bit" value="542"/>
      <geneRef id="11">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="12">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="7">
      <score id="bit" value="541"/>
      <geneRef id="13">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="14">
        <score id="inparalog" value="0.393"/>
      </geneRef>
      <geneRef id="15">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="8">
      <score id="bit" value="539"/>
      <geneRef id="16">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="17">
        <score id="inparalog" value="0.673"/>
      </geneRef>
      <geneRef id="18">
        <score id="inparalog" value="0.255"/>
      </geneRef>
      <geneRef id="19">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="9">
      <score id="bit" value="510"/>
      <geneRef id="20">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.72"/>
      </geneRef>
      <geneRef id="21">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="10">
      <score id="bit" value="482"/>
      <geneRef id="22">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="23">
        <score id="inparalog" value="0.347"/>
      </geneRef>
      <geneRef id="24">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="11">
      <score id="bit" value="478"/>
      <geneRef id="25">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="26">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="12">
      <score id="bit" value="475"/>
      <geneRef id="27">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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