<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="2336" inparalogs="5203"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Candida glabrata" NCBITaxId="284593">
    <database name="UniProt" version="UniProt_Complete_Proteomes_2013_06" protLink="http://www.uniprot.org/uniprot/">
      <genes>
        <gene id="1" protId="Q6FQZ4" geneId="CAGL0I02266g"/>
        <gene id="3" protId="Q6FL72" geneId="CAGL0L05676g"/>
        <gene id="5" protId="Q6FLS3" geneId="CAGL0L01089g"/>
        <gene id="7" protId="Q6FKK8" geneId="CAGL0L10780g"/>
        <gene id="9" protId="Q6FIU8" geneId="CAGL0M11616g"/>
        <gene id="11" protId="Q6FQS9" geneId="CAGL0I03828g"/>
        <gene id="13" protId="Q6FTN8" geneId="CAGL0G01034g"/>
        <gene id="14" protId="Q6FMZ3" geneId="CAGL0K04037g"/>
        <gene id="16" protId="Q6FY11" geneId="CAGL0A01914g"/>
        <gene id="18" protId="Q6FUU9" geneId="CAGL0F00495g"/>
        <gene id="19" protId="Q6FNE7" geneId="CAGL0K00517g"/>
        <gene id="21" protId="Q6FY64" geneId="CAGL0A03718g"/>
        <gene id="23" protId="Q6FNY7" geneId="POL2"/>
        <gene id="25" protId="Q6FLD5" geneId="RPB2"/>
        <gene id="27" protId="Q6FLJ9" geneId="CAGL0L02849g"/>
        <gene id="29" protId="Q6FKG9" geneId="CAGL0L11660g"/>
        <gene id="31" protId="Q6FMM6" geneId="CAGL0K06787g"/>
        <gene id="32" protId="Q6FU24" geneId="CAGL0F06941g"/>
        <gene id="34" protId="Q6FUY8" geneId="CAGL0E06138g"/>
        <gene id="36" protId="Q6FWK7" geneId="CAGL0C04917g"/>
        <gene id="38" protId="Q6FV16" geneId="CAGL0E05500g"/>
        <gene id="40" protId="Q6FWS9" geneId="CAGL0C03201g"/>
        <gene id="42" protId="Q6FPQ9" geneId="CAGL0J01848g"/>
        <gene id="44" protId="Q6FUU1" geneId="CAGL0F00671g"/>
        <gene id="46" protId="Q6FYA7" geneId="EFT1"/>
        <gene id="48" protId="Q6FIV4" geneId="ARO1"/>
        <gene id="50" protId="Q6FT10" geneId="CAGL0G06270g"/>
        <gene id="52" protId="Q6FTD7" geneId="CAGL0G03311g"/>
        <gene id="54" protId="O93794" geneId="TOP2"/>
        <gene id="56" protId="Q6FSK0" geneId="CAGL0G09977g"/>
        <gene id="58" protId="Q6FNS8" geneId="CAGL0J09350g"/>
        <gene id="60" protId="Q6FMX3" geneId="CAGL0K04499g"/>
        <gene id="62" protId="Q6FN18" geneId="MYO5"/>
        <gene id="63" protId="Q6FMJ3" geneId="MYO3"/>
        <gene id="65" protId="Q6FPC4" geneId="CAGL0J04928g"/>
        <gene id="67" protId="Q6FKF7" geneId="CAGL0L11946g"/>
        <gene id="69" protId="Q6FPK3" geneId="CAGL0J03146g"/>
        <gene id="71" protId="Q6FMI5" geneId="LYS2"/>
        <gene id="73" protId="Q6FTE7" geneId="CAGL0G03091g"/>
        <gene id="75" protId="Q6FSQ3" geneId="CAGL0G08712g"/>
        <gene id="77" protId="Q6FRV8" geneId="CAGL0H05533g"/>
        <gene id="79" protId="Q6FMG2" geneId="CAGL0K08294g"/>
        <gene id="81" protId="Q6FKZ7" geneId="CAGL0L07348g"/>
        <gene id="83" protId="Q6FW99" geneId="CAGL0D01826g"/>
        <gene id="85" protId="Q6FMA6" geneId="CAGL0K09614g"/>
        <gene id="87" protId="Q6FVR0" geneId="CAGL0D06424g"/>
        <gene id="89" protId="Q6FNF6" geneId="CAGL0K00319g"/>
        <gene id="91" protId="Q6FKL7" geneId="CAGL0L10582g"/>
        <gene id="92" protId="Q6FSG6" geneId="CAGL0H00682g"/>
        <gene id="94" protId="Q6FND0" geneId="CAGL0K00913g"/>
        <gene id="95" protId="Q6FK26" geneId="CAGL0M01694g"/>
        <gene id="97" protId="Q6FL41" geneId="CAGL0L06402g"/>
        <gene id="99" protId="Q6FVM0" geneId="CAGL0E00847g"/>
        <gene id="101" protId="Q6FXG2" geneId="CAGL0B02189g"/>
        <gene id="103" protId="Q6FV21" geneId="CAGL0E05390g"/>
        <gene id="105" protId="Q6FQT4" geneId="CAGL0I03718g"/>
        <gene id="107" protId="Q6FQ29" geneId="CAGL0I09614g"/>
        <gene id="109" protId="Q6FPI1" geneId="CAGL0J03652g"/>
        <gene id="111" protId="Q6FN71" geneId="CAGL0K02255g"/>
        <gene id="113" protId="Q6FLT9" geneId="CAGL0L00715g"/>
        <gene id="115" protId="Q6FLR0" geneId="CAGL0L01419g"/>
        <gene id="117" protId="Q6FVW3" geneId="CAGL0D05082g"/>
        <gene id="119" protId="Q6FXN4" geneId="CAGL0B04389g"/>
        <gene id="121" protId="Q6FTD8" geneId="CAGL0G03289g"/>
        <gene id="122" protId="Q6FTB5" geneId="CAGL0G03795g"/>
        <gene id="124" protId="Q6FSQ1" geneId="CAGL0G08756g"/>
        <gene id="126" protId="Q6FKF8" geneId="CAGL0L11924g"/>
        <gene id="128" protId="Q6FST0" geneId="CAGL0G08085g"/>
        <gene id="129" protId="Q6FKG3" geneId="CAGL0L11814g"/>
        <gene id="131" protId="Q6FQN3" geneId="CAGL0I04862g"/>
        <gene id="132" protId="Q6FJC9" geneId="CAGL0M07293g"/>
        <gene id="139" protId="Q6FLV2" geneId="CAGL0L00429g"/>
        <gene id="141" protId="Q6FLU9" geneId="CAGL0L00495g"/>
        <gene id="143" protId="Q6FPU5" geneId="CAGL0J00847g"/>
        <gene id="145" protId="Q6FKV9" geneId="CAGL0L08250g"/>
        <gene id="147" protId="Q6FKG5" geneId="CAGL0L11770g"/>
        <gene id="149" protId="Q6FNL5" geneId="CAGL0J10758g"/>
        <gene id="151" protId="Q6FU15" geneId="CAGL0F07139g"/>
        <gene id="153" protId="Q6FIW2" geneId="CAGL0M11308g"/>
        <gene id="155" protId="Q6FIN6" geneId="CAGL0M12991g"/>
        <gene id="157" protId="O93796" geneId="TEF3"/>
        <gene id="159" protId="Q6FM65" geneId="CAGL0K10626g"/>
        <gene id="160" protId="Q6FUB8" geneId="CAGL0F04719g"/>
        <gene id="162" protId="Q6FIS4" geneId="CAGL0M12144g"/>
        <gene id="164" protId="Q6FWV6" geneId="CAGL0C02563g"/>
        <gene id="166" protId="Q6FPE6" geneId="PIM1"/>
        <gene id="168" protId="Q6FRK3" geneId="CAGL0H07887g"/>
        <gene id="170" protId="Q6FXV1" geneId="CAGL0A00363g"/>
        <gene id="172" protId="Q6FPE5" geneId="CAGL0J04444g"/>
        <gene id="174" protId="Q6FXV8" geneId="CAGL0A00209g"/>
        <gene id="176" protId="Q6FMF1" geneId="CAGL0K08558g"/>
        <gene id="178" protId="Q6FVV6" geneId="CAGL0D05258g"/>
        <gene id="180" protId="Q6FJ43" geneId="CAGL0M09361g"/>
        <gene id="182" protId="Q6FN63" geneId="CAGL0K02431g"/>
        <gene id="184" protId="Q6FUQ6" geneId="MEF1"/>
        <gene id="186" protId="Q6FP73" geneId="CAGL0J06094g"/>
        <gene id="188" protId="Q6FR25" geneId="CAGL0I01496g"/>
        <gene id="189" protId="Q6FQV2" geneId="CAGL0I03322g"/>
        <gene id="191" protId="Q6FJV0" geneId="GLC3"/>
        <gene id="193" protId="Q6FM46" geneId="SEC26"/>
        <gene id="195" protId="Q876N3" geneId="SSB1"/>
        <gene id="197" protId="Q6FUL9" geneId="CAGL0F02431g"/>
        <gene id="199" protId="Q6FMC1" geneId="CAGL0K09284g"/>
        <gene id="201" protId="Q6FP58" geneId="CAGL0J06424g"/>
        <gene id="204" protId="Q6FW50" geneId="KAR2"/>
        <gene id="206" protId="Q6FS07" geneId="CAGL0H04411g"/>
        <gene id="208" protId="Q6FJH0" geneId="CAGL0M06369g"/>
        <gene id="210" protId="Q6FKJ1" geneId="NTE1"/>
        <gene id="212" protId="Q6FV00" geneId="CAGL0E05874g"/>
        <gene id="214" protId="Q6FPK4" geneId="CAGL0J03124g"/>
        <gene id="216" protId="Q6FV37" geneId="INO80"/>
        <gene id="218" protId="Q6FW19" geneId="CAGL0D03674g"/>
        <gene id="220" protId="Q6FMI3" geneId="CAGL0D01188g"/>
        <gene id="222" protId="Q6FLM4" geneId="CAGL0L02299g"/>
        <gene id="224" protId="Q6FX34" geneId="CAGL0C00649g"/>
        <gene id="226" protId="Q6FSI6" geneId="SEC232"/>
        <gene id="227" protId="Q6FSK3" geneId="SEC231"/>
        <gene id="229" protId="Q6FRF7" geneId="CAGL0H08932g"/>
        <gene id="231" protId="Q6FK10" geneId="CAGL0M02035g"/>
        <gene id="233" protId="Q6FTB3" geneId="CAGL0G03883g"/>
        <gene id="235" protId="Q6FUA8" geneId="CAGL0F04939g"/>
        <gene id="237" protId="Q6FQM7" geneId="CAGL0I04994g"/>
        <gene id="239" protId="Q6FXZ3" geneId="CAGL0A01430g"/>
        <gene id="242" protId="Q6FMR2" geneId="CAGL0K05973g"/>
        <gene id="244" protId="Q6FSW0" geneId="CAGL0G07425g"/>
        <gene id="246" protId="Q6FJ65" geneId="CAGL0M08822g"/>
        <gene id="248" protId="Q6FXI2" geneId="ACS2"/>
        <gene id="250" protId="Q6FK83" geneId="CAGL0M00374g"/>
        <gene id="252" protId="Q6FWT4" geneId="SPT16"/>
        <gene id="254" protId="Q6FSZ4" geneId="CAGL0G06666g"/>
        <gene id="256" protId="Q6FV24" geneId="CAGL0E05324g"/>
        <gene id="258" protId="Q6FIL5" geneId="CAGL0M13475g"/>
        <gene id="260" protId="Q6FVQ9" geneId="CAGL0D06446g"/>
        <gene id="262" protId="Q6FTM3" geneId="CAGL0G01364g"/>
        <gene id="264" protId="Q6FN04" geneId="CAGL0K03795g"/>
        <gene id="266" protId="Q6FXC4" geneId="CAGL0B02035g"/>
        <gene id="268" protId="Q6FQQ8" geneId="CAGL0I04312g"/>
        <gene id="269" protId="Q6FPQ8" geneId="CAGL0J01870g"/>
        <gene id="271" protId="Q6FSH4" geneId="CAGL0H00506g"/>
        <gene id="273" protId="Q6FLI6" geneId="CAGL0L03135g"/>
        <gene id="275" protId="Q6FJ33" geneId="CAGL0M09581g"/>
        <gene id="277" protId="Q6FV84" geneId="CAGL0E03982g"/>
        <gene id="278" protId="Q6FWS5" geneId="CAGL0C03289g"/>
        <gene id="280" protId="Q6FKY0" geneId="CAGL0L07744g"/>
        <gene id="282" protId="Q6FIP2" geneId="RPN2"/>
        <gene id="284" protId="Q6FVT2" geneId="CAGL0D05808g"/>
        <gene id="286" protId="Q6FMI6" geneId="CAGL0K07766g"/>
        <gene id="288" protId="Q6FJL2" geneId="CAGL0M05423g"/>
        <gene id="290" protId="Q6FKT2" geneId="CAGL0L08888g"/>
        <gene id="292" protId="Q6FIM1" geneId="CAGL0M13343g"/>
        <gene id="294" protId="Q6FLR1" geneId="CAGL0L01397g"/>
        <gene id="296" protId="Q6FRR0" geneId="PCK1"/>
        <gene id="298" protId="Q6FXG1" geneId="CAGL0B02211g"/>
        <gene id="300" protId="Q6FNH4" geneId="CAGL0J11660g"/>
        <gene id="301" protId="Q6FVE9" geneId="CAGL0E02431g"/>
        <gene id="303" protId="Q6FTY3" geneId="CAGL0F07887g"/>
        <gene id="305" protId="Q6FXU4" geneId="CAGL0A00517g"/>
        <gene id="307" protId="Q6FLN0" geneId="CAGL0L02167g"/>
        <gene id="310" protId="Q6FQA9" geneId="CAGL0I07733g"/>
        <gene id="312" protId="Q6FY79" geneId="CAGL0A03366g"/>
        <gene id="314" protId="Q6FN19" geneId="CAGL0K03465g"/>
        <gene id="316" protId="Q6FSY3" geneId="CAGL0G06908g"/>
        <gene id="318" protId="Q6FTX6" geneId="CAGL0F08041g"/>
        <gene id="319" protId="Q6FKK9" geneId="CAGL0L10758g"/>
        <gene id="321" protId="Q6FUU7" geneId="CAGL0F00539g"/>
        <gene id="323" protId="Q6FKV8" geneId="CAGL0L08272g"/>
        <gene id="325" protId="P60009" geneId="ACT1"/>
        <gene id="327" protId="Q6FK22" geneId="CAGL0M01782g"/>
        <gene id="328" protId="Q6FV54" geneId="CAGL0E04642g"/>
        <gene id="330" protId="Q6FT95" geneId="CAGL0G04367g"/>
        <gene id="332" protId="Q6FLX8" geneId="CAGL0K12650g"/>
        <gene id="334" protId="Q6FJ21" geneId="CAGL0M09823g"/>
        <gene id="336" protId="Q6FST2" geneId="CAGL0G08041g"/>
        <gene id="338" protId="Q6FUD0" geneId="URA7"/>
        <gene id="340" protId="Q6FIL3" geneId="HAS1"/>
        <gene id="342" protId="Q6FWT8" geneId="CAGL0C02959g"/>
        <gene id="343" protId="Q6FU51" geneId="CAGL0F06347g"/>
        <gene id="345" protId="Q6FLC2" geneId="CAGL0L04532g"/>
        <gene id="347" protId="Q6FW40" geneId="CAGL0D03168g"/>
        <gene id="349" protId="Q6FXE8" geneId="CAGL0B02497g"/>
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        <gene id="353" protId="Q6FP38" geneId="DBP1"/>
        <gene id="355" protId="Q6FM51" geneId="LYS4"/>
        <gene id="357" protId="Q6FXQ1" geneId="CAGL0B03993g"/>
        <gene id="359" protId="Q6FPS4" geneId="CAGL0J01353g"/>
        <gene id="360" protId="Q6FRD6" geneId="CAGL0H09416g"/>
        <gene id="362" protId="Q6FT35" geneId="CAGL0G05698g"/>
        <gene id="364" protId="Q6FUX2" geneId="CAGL0E06490g"/>
        <gene id="366" protId="Q6FQ84" geneId="CAGL0I08327g"/>
        <gene id="368" protId="Q6FQR2" geneId="CAGL0I04224g"/>
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        <gene id="376" protId="Q6FQN5" geneId="CAGL0I04818g"/>
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        <gene id="404" protId="Q6FNI1" geneId="CAGL0J11506g"/>
        <gene id="406" protId="Q6FXH8" geneId="CAGL0B02794g"/>
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        <gene id="414" protId="Q6FIK1" geneId="CAGL0M13783g"/>
        <gene id="416" protId="Q6FM73" geneId="CAGL0K10384g"/>
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        <gene id="431" protId="Q6FWY4" geneId="CAGL0C01947g"/>
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        <gene id="445" protId="Q6FNG0" geneId="CAGL0K00231g"/>
        <gene id="447" protId="Q6FVM2" geneId="CAGL0E00781g"/>
        <gene id="449" protId="Q6FKH6" geneId="CAGL0L11506g"/>
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        <gene id="453" protId="Q6FQU8" geneId="CAGL0I03410g"/>
        <gene id="455" protId="Q6FNT3" geneId="CAGL0J09240g"/>
        <gene id="456" protId="Q6FP59" geneId="CAGL0J06402g"/>
        <gene id="458" protId="Q6FJV1" geneId="VAC8"/>
        <gene id="460" protId="Q6FTQ6" geneId="CAGL0G00528g"/>
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        <gene id="466" protId="Q6FXA7" geneId="CAGL0B01441g"/>
        <gene id="468" protId="Q6FRK6" geneId="CAGL0H07821g"/>
        <gene id="470" protId="Q6FWW6" geneId="CAGL0C02343g"/>
        <gene id="472" protId="Q6FNZ8" geneId="CAGL0J07788g"/>
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        <gene id="478" protId="Q6FMJ8" geneId="CAGL0K07480g"/>
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        <gene id="489" protId="Q6FT04" geneId="CAGL0G06402g"/>
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        <gene id="493" protId="Q6FJR1" geneId="CAGL0M04279g"/>
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        <gene id="514" protId="Q6FK90" geneId="CAGL0M00220g"/>
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        <gene id="520" protId="Q6FT78" geneId="CAGL0G04741g"/>
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        <gene id="526" protId="Q6FUR2" geneId="CAGL0F01397g"/>
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        <gene id="538" protId="Q6FKE6" geneId="CAGL0L12188g"/>
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        <gene id="544" protId="Q6FNI4" geneId="CAGL0J11440g"/>
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        <gene id="5127" protId="Q6FX77" geneId="CAGL0B01144g"/>
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        <gene id="5131" protId="Q6FUE1" geneId="CAGL0F04191g"/>
        <gene id="5134" protId="Q6FMD1" geneId="CAGL0K09020g"/>
        <gene id="5136" protId="Q6FR95" geneId="CAGL0H10384g"/>
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        <gene id="5144" protId="Q6FWL6" geneId="CAGL0C04719g"/>
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        <gene id="5148" protId="Q6FQT8" geneId="CAGL0I03630g"/>
        <gene id="5150" protId="Q6FMZ1" geneId="CAGL0K04103g"/>
        <gene id="5152" protId="Q6FVU0" geneId="CAGL0D05632g"/>
        <gene id="5154" protId="Q6FUA2" geneId="CAGL0F05071g"/>
        <gene id="5158" protId="Q6FY62" geneId="CAGL0A02651g"/>
        <gene id="5160" protId="Q6FXW8" geneId="CAGL0A01001g"/>
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        <gene id="5171" protId="Q6FUJ9" geneId="CAGL0F02871g"/>
        <gene id="5173" protId="Q6FKK6" geneId="CAGL0L10824g"/>
        <gene id="5175" protId="Q6FNB8" geneId="CAGL0K01199g"/>
        <gene id="5177" protId="Q6FKM9" geneId="CAGL0L10318g"/>
        <gene id="5179" protId="Q6FP78" geneId="AAH1"/>
        <gene id="5182" protId="Q6FWK9" geneId="CAGL0C04873g"/>
        <gene id="5184" protId="Q6FN09" geneId="CAGL0K03685g"/>
        <gene id="5186" protId="Q6FTK1" geneId="CAGL0G01881g"/>
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        <gene id="5190" protId="Q6FSE6" geneId="CAGL0H01111g"/>
        <gene id="5192" protId="Q6FV34" geneId="LYS5"/>
        <gene id="5194" protId="Q6FRZ8" geneId="CAGL0H04631g"/>
        <gene id="5195" protId="Q6FUJ1" geneId="CAGL0F03069g"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="C.glabrata" link="http://www.uniprot.org/taxonomy/284593"/>
    </notes>
  </species>
  <species name="Melampsora larici-populina" NCBITaxId="747676">
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    <notes>
      <additionalInformation abbreviation="M.larici-populina" link="http://www.uniprot.org/taxonomy/747676"/>
    </notes>
  </species>
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    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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