<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="1763" inparalogs="5259"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Bos taurus " NCBITaxId="9913">
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        <gene id="4" protId="E1B9R5" geneId="LOC525414"/>
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        <gene id="8" protId="E1BLB4" geneId="LOC788092"/>
        <gene id="9" protId="F1MJJ0" geneId="Bt.104534"/>
        <gene id="10" protId="F1N724" geneId="DNAH11"/>
        <gene id="12" protId="G3N1C8" geneId="uncharacterized_G3N1C8"/>
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        <gene id="5032" protId="G3X7V4" geneId="LOC787600"/>
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        <gene id="5070" protId="G3N1G1" geneId="Bt.74414"/>
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        <gene id="5099" protId="Q2TBU3" geneId="GOSR1"/>
        <gene id="5101" protId="Q95M17" geneId="CHIA"/>
        <gene id="5102" protId="E1BJR6" geneId="uncharacterized_E1BJR6"/>
        <gene id="5103" protId="Q28042" geneId="OVGP1"/>
        <gene id="5104" protId="G3X7D2" geneId="LOC788983"/>
        <gene id="5105" protId="P30922" geneId="CHI3L1"/>
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        <gene id="5110" protId="E1BCK8" geneId="uncharacterized_E1BCK8"/>
        <gene id="5112" protId="A4IFB4" geneId="KCTD7"/>
        <gene id="5113" protId="F1MDD6" geneId="Bt.27788"/>
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        <gene id="5116" protId="G5E6E7" geneId="LOC100852331"/>
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        <gene id="5124" protId="A7YWN4" geneId="LOC786620"/>
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        <gene id="5192" protId="G3MZI2" geneId="uncharacterized_G3MZI2"/>
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        <gene id="5198" protId="Q1RMH4" geneId="RABAC1"/>
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        <gene id="5206" protId="Q3MHR5" geneId="SRSF2"/>
        <gene id="5208" protId="A6H7H2" geneId="KLC1"/>
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        <gene id="5210" protId="Q2HJJ0" geneId="KLC4"/>
        <gene id="5211" protId="Q2TBQ9" geneId="KLC3"/>
        <gene id="5213" protId="E1BMA9" geneId="AIFM3"/>
        <gene id="5214" protId="E1BJA2" geneId="AIFM1"/>
        <gene id="5216" protId="Q5I597" geneId="BHMT"/>
        <gene id="5217" protId="F1N4C6" geneId="LOC616683"/>
        <gene id="5219" protId="Q2KIN1" geneId="DPM2"/>
        <gene id="5221" protId="Q2NKZ7" geneId="PTPMT1"/>
        <gene id="5223" protId="F1MV20" geneId="uncharacterized_F1MV20"/>
        <gene id="5224" protId="A7MB98" geneId="ZFP36L1"/>
        <gene id="5225" protId="P53781" geneId="ZFP36"/>
        <gene id="5227" protId="E1BJB4" geneId="RPGRIP1L"/>
        <gene id="5228" protId="Q9GLM3" geneId="RPGRIP1"/>
        <gene id="5230" protId="Q3ZCE0" geneId="NAA38"/>
        <gene id="5231" protId="Q5E9Z8" geneId="LSM1"/>
        <gene id="5233" protId="Q3SZL9" geneId="TMEM50B"/>
        <gene id="5234" protId="Q17QR3" geneId="TMEM50A"/>
        <gene id="5236" protId="E1BP86" geneId="LSMD1"/>
        <gene id="5238" protId="Q3SZD1" geneId="PEX19"/>
        <gene id="5240" protId="Q1LZE6" geneId="CHPT1"/>
        <gene id="5241" protId="F1N1V2" geneId="CEPT1"/>
        <gene id="5243" protId="Q3ZBG7" geneId="SRP19"/>
        <gene id="5245" protId="Q9N287" geneId="DNAJC12"/>
        <gene id="5247" protId="E1BFW9" geneId="OTUD5"/>
        <gene id="5249" protId="F1MG81" geneId="ATPAF1"/>
        <gene id="5251" protId="Q56JY0" geneId="uncharacterized_Q56JY0"/>
        <gene id="5253" protId="P82922" geneId="DAP3"/>
        <gene id="5255" protId="Q2T9X1" geneId="POLR3H"/>
        <gene id="5257" protId="F1N0Y0" geneId="UPP1"/>
        <gene id="5258" protId="F6R7H1" geneId="UPP2"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="B.taurus" link="http://www.uniprot.org/taxonomy/9913"/>
    </notes>
  </species>
  <species name="Leishmania braziliensis " NCBITaxId="5660">
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    </database>
    <notes>
      <additionalInformation abbreviation="L.braziliensis" link="http://www.uniprot.org/taxonomy/5660"/>
    </notes>
  </species>
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    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
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