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        <gene id="724" protId="P12425" geneId="glnA"/>
        <gene id="726" protId="O34653" geneId="des"/>
        <gene id="728" protId="P21465" geneId="rpsC"/>
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        <gene id="745" protId="O32090" geneId="pncB"/>
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        <gene id="748" protId="O34592" geneId="ydjP"/>
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        <gene id="759" protId="P21464" geneId="rpsB"/>
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        <gene id="762" protId="P54435" geneId="yrkH"/>
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        <gene id="779" protId="O07592" geneId="yhdW"/>
        <gene id="780" protId="P54527" geneId="yqiK"/>
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        <gene id="783" protId="P37502" geneId="yybB"/>
        <gene id="784" protId="P54501" geneId="yqgX"/>
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        <gene id="790" protId="P37532" geneId="yaaI"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="B.subtilis" link="http://www.uniprot.org/taxonomy/224308"/>
    </notes>
  </species>
  <species name="Trypanosoma cruzi " NCBITaxId="5693">
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        <gene id="481" protId="K4DW76" geneId="TCSYLVIO_006389"/>
        <gene id="483" protId="K4DP30" geneId="TCSYLVIO_009207"/>
        <gene id="485" protId="K4E5E6" geneId="TCSYLVIO_003077"/>
        <gene id="487" protId="K4EBU2" geneId="TCSYLVIO_001184"/>
        <gene id="489" protId="K4DYW6" geneId="TCSYLVIO_005393"/>
        <gene id="491" protId="K4E697" geneId="TCSYLVIO_002878"/>
        <gene id="493" protId="K4DQ05" geneId="TCSYLVIO_008887"/>
        <gene id="494" protId="K4DU71" geneId="TCSYLVIO_007080"/>
        <gene id="496" protId="K4E7W5" geneId="TCSYLVIO_002383"/>
        <gene id="498" protId="K4EA11" geneId="TCSYLVIO_001386"/>
        <gene id="500" protId="K4E535" geneId="TCSYLVIO_003636"/>
        <gene id="503" protId="K4E1P3" geneId="TCSYLVIO_004390"/>
        <gene id="504" protId="O61084" geneId="TCSYLVIO_006026"/>
        <gene id="505" protId="K4E2D9" geneId="TCSYLVIO_004391"/>
        <gene id="508" protId="K4E3B2" geneId="TCSYLVIO_003911"/>
        <gene id="509" protId="K4DML9" geneId="TCSYLVIO_009589"/>
        <gene id="511" protId="K4DN76" geneId="TCSYLVIO_009376"/>
        <gene id="513" protId="K4DVX8" geneId="TCSYLVIO_006466"/>
        <gene id="515" protId="K4E7Z4" geneId="TCSYLVIO_002576"/>
        <gene id="516" protId="K4E928" geneId="TCSYLVIO_001746"/>
        <gene id="518" protId="K4DLZ1" geneId="TCSYLVIO_009923"/>
        <gene id="520" protId="K4E368" geneId="TCSYLVIO_003952"/>
        <gene id="522" protId="K4DY72" geneId="TCSYLVIO_005634"/>
        <gene id="525" protId="K4EE02" geneId="TCSYLVIO_000219"/>
        <gene id="527" protId="K4DUF3" geneId="TCSYLVIO_007077"/>
        <gene id="532" protId="K4DXR0" geneId="TCSYLVIO_005834"/>
        <gene id="534" protId="K4DUT5" geneId="TCSYLVIO_007289"/>
        <gene id="536" protId="K4DY58" geneId="TCSYLVIO_005645"/>
        <gene id="539" protId="K4DYG5" geneId="TCSYLVIO_005792"/>
        <gene id="540" protId="K4DPE7" geneId="TCSYLVIO_008917"/>
        <gene id="541" protId="K4DXR2" geneId="TCSYLVIO_005791"/>
        <gene id="542" protId="K4DWM6" geneId="TCSYLVIO_006300"/>
        <gene id="546" protId="K4E1F1" geneId="TCSYLVIO_004732"/>
        <gene id="548" protId="K4DTT8" geneId="TCSYLVIO_007641"/>
        <gene id="549" protId="K4E0T3" geneId="TCSYLVIO_004730"/>
        <gene id="553" protId="K4DKT1" geneId="TCSYLVIO_010326"/>
        <gene id="555" protId="K4E0J2" geneId="TCSYLVIO_005007"/>
        <gene id="557" protId="K4DSN8" geneId="TCSYLVIO_007607"/>
        <gene id="558" protId="K4EBE3" geneId="TCSYLVIO_001056"/>
        <gene id="559" protId="K4EBN3" geneId="TCSYLVIO_000957"/>
        <gene id="560" protId="K4E9L6" geneId="TCSYLVIO_001805"/>
        <gene id="561" protId="Q6V7K6" geneId="TCSYLVIO_005686"/>
        <gene id="562" protId="K4E0V1" geneId="TCSYLVIO_004680"/>
        <gene id="563" protId="K4E492" geneId="TCSYLVIO_003462"/>
        <gene id="566" protId="K4DXN0" geneId="TCSYLVIO_006042"/>
        <gene id="568" protId="K4E314" geneId="TCSYLVIO_003938"/>
        <gene id="570" protId="K4DU00" geneId="TCSYLVIO_007148"/>
        <gene id="572" protId="K4E1Y2" geneId="TCSYLVIO_004764"/>
        <gene id="575" protId="K4DT16" geneId="TCSYLVIO_007504"/>
        <gene id="577" protId="K4EAM4" geneId="TCSYLVIO_001615"/>
        <gene id="578" protId="K4DZ82" geneId="TCSYLVIO_005480"/>
        <gene id="580" protId="K4DWZ6" geneId="TCSYLVIO_006088"/>
        <gene id="582" protId="K4E103" geneId="TCSYLVIO_004735"/>
        <gene id="584" protId="K4E2C4" geneId="TCSYLVIO_004276"/>
        <gene id="586" protId="K4E5P4" geneId="TCSYLVIO_002943"/>
        <gene id="588" protId="K4E5I9" geneId="TCSYLVIO_003035"/>
        <gene id="590" protId="K4EA17" geneId="TCSYLVIO_001836"/>
        <gene id="592" protId="K4DN58" geneId="TCSYLVIO_009363"/>
        <gene id="596" protId="K4DXA2" geneId="TCSYLVIO_006196"/>
        <gene id="599" protId="K4DUG2" geneId="TCSYLVIO_007066"/>
        <gene id="602" protId="K4DSR2" geneId="TCSYLVIO_007603"/>
        <gene id="604" protId="K4ECY5" geneId="TCSYLVIO_000414"/>
        <gene id="605" protId="K4E7W1" geneId="TCSYLVIO_002204"/>
        <gene id="607" protId="K4DJI6" geneId="TCSYLVIO_010670"/>
        <gene id="611" protId="K4E8I2" geneId="TCSYLVIO_002073"/>
        <gene id="613" protId="K4DXH2" geneId="TCSYLVIO_006003"/>
        <gene id="615" protId="K4DQV7" geneId="TCSYLVIO_008388"/>
        <gene id="617" protId="K4E538" geneId="TCSYLVIO_003139"/>
        <gene id="619" protId="K4E4L1" geneId="TCSYLVIO_003456"/>
        <gene id="621" protId="K4EAY8" geneId="TCSYLVIO_001053"/>
        <gene id="623" protId="K4E708" geneId="TCSYLVIO_002946"/>
        <gene id="625" protId="K4DLM2" geneId="TCSYLVIO_009958"/>
        <gene id="627" protId="K4E065" geneId="TCSYLVIO_005013"/>
        <gene id="633" protId="K4E3M6" geneId="TCSYLVIO_003843"/>
        <gene id="634" protId="K4DWU1" geneId="TCSYLVIO_006146"/>
        <gene id="635" protId="K4DX15" geneId="TCSYLVIO_006145"/>
        <gene id="638" protId="K4DTG9" geneId="TCSYLVIO_007760"/>
        <gene id="639" protId="K4DKW8" geneId="TCSYLVIO_010189"/>
        <gene id="640" protId="K4ED56" geneId="TCSYLVIO_000349"/>
        <gene id="641" protId="K4ECJ0" geneId="TCSYLVIO_000741"/>
        <gene id="642" protId="K4DM82" geneId="TCSYLVIO_009823"/>
        <gene id="644" protId="K4EA12" geneId="TCSYLVIO_001843"/>
        <gene id="646" protId="K4E8H9" geneId="TCSYLVIO_002390"/>
        <gene id="647" protId="K4E774" geneId="TCSYLVIO_002391"/>
        <gene id="649" protId="K4DUH5" geneId="TCSYLVIO_007051"/>
        <gene id="653" protId="K4E8J0" geneId="TCSYLVIO_001958"/>
        <gene id="656" protId="K4E4Y7" geneId="TCSYLVIO_003199"/>
        <gene id="659" protId="K4E4K3" geneId="TCSYLVIO_003574"/>
        <gene id="661" protId="K4DJX1" geneId="TCSYLVIO_010548"/>
        <gene id="663" protId="K4E3I4" geneId="TCSYLVIO_003728"/>
        <gene id="664" protId="K4E924" geneId="TCSYLVIO_001803"/>
        <gene id="665" protId="K4E2P4" geneId="TCSYLVIO_004054"/>
        <gene id="667" protId="K4DNM9" geneId="TCSYLVIO_009222"/>
        <gene id="669" protId="K4DYR2" geneId="TCSYLVIO_005436"/>
        <gene id="673" protId="K4E7W9" geneId="TCSYLVIO_002596"/>
        <gene id="675" protId="K4DRZ8" geneId="TCSYLVIO_000952"/>
        <gene id="678" protId="K4DPY7" geneId="TCSYLVIO_008699"/>
        <gene id="680" protId="K4DKB5" geneId="TCSYLVIO_010383"/>
        <gene id="682" protId="K4DK89" geneId="TCSYLVIO_010539"/>
        <gene id="684" protId="K4DNH9" geneId="TCSYLVIO_009375"/>
        <gene id="686" protId="K4DV79" geneId="TCSYLVIO_006941"/>
        <gene id="688" protId="K4E3V5" geneId="TCSYLVIO_003743"/>
        <gene id="690" protId="K4EED7" geneId="TCSYLVIO_000051"/>
        <gene id="691" protId="K4EDP0" geneId="TCSYLVIO_000084"/>
        <gene id="693" protId="K4DLH9" geneId="TCSYLVIO_010069"/>
        <gene id="695" protId="K4DT01" geneId="TCSYLVIO_007593"/>
        <gene id="696" protId="K4EBE6" geneId="TCSYLVIO_000896"/>
        <gene id="697" protId="K4DZF0" geneId="TCSYLVIO_005659"/>
        <gene id="698" protId="K4DR28" geneId="TCSYLVIO_008270"/>
        <gene id="699" protId="K4E458" geneId="TCSYLVIO_003521"/>
        <gene id="700" protId="K4DTD1" geneId="TCSYLVIO_007367"/>
        <gene id="701" protId="K4DKJ7" geneId="TCSYLVIO_010471"/>
        <gene id="702" protId="K4DLF7" geneId="TCSYLVIO_009972"/>
        <gene id="703" protId="K4DUA6" geneId="TCSYLVIO_007485"/>
        <gene id="704" protId="K4E5Y7" geneId="TCSYLVIO_003095"/>
        <gene id="705" protId="K4DL95" geneId="TCSYLVIO_010076"/>
        <gene id="706" protId="K4E1P0" geneId="TCSYLVIO_004621"/>
        <gene id="707" protId="K4DXD2" geneId="TCSYLVIO_006156"/>
        <gene id="708" protId="K4E8K7" geneId="TCSYLVIO_001945"/>
        <gene id="709" protId="K4DTF9" geneId="TCSYLVIO_007562"/>
        <gene id="710" protId="K4DY70" geneId="TCSYLVIO_006071"/>
        <gene id="711" protId="K4DTC8" geneId="TCSYLVIO_007407"/>
        <gene id="712" protId="K4DJ75" geneId="TCSYLVIO_010938"/>
        <gene id="713" protId="K4DX95" geneId="TCSYLVIO_005962"/>
        <gene id="715" protId="K4E3S7" geneId="TCSYLVIO_003660"/>
        <gene id="717" protId="K4DUB8" geneId="TCSYLVIO_007476"/>
        <gene id="719" protId="K4E1R3" geneId="TCSYLVIO_004452"/>
        <gene id="721" protId="K4E308" geneId="TCSYLVIO_004136"/>
        <gene id="723" protId="K4E512" geneId="TCSYLVIO_003172"/>
        <gene id="725" protId="K4E9B6" geneId="TCSYLVIO_001811"/>
        <gene id="727" protId="K4EBQ6" geneId="TCSYLVIO_000837"/>
        <gene id="729" protId="K4DU81" geneId="TCSYLVIO_000304"/>
        <gene id="730" protId="K4DU64" geneId="TCSYLVIO_007068"/>
        <gene id="732" protId="K4DPS8" geneId="TCSYLVIO_008924"/>
        <gene id="733" protId="K4DPI3" geneId="TCSYLVIO_008925"/>
        <gene id="736" protId="K4E800" geneId="TCSYLVIO_002106"/>
        <gene id="738" protId="K4DZV3" geneId="TCSYLVIO_005026"/>
        <gene id="741" protId="K4E5S5" geneId="TCSYLVIO_003182"/>
        <gene id="744" protId="K4E9G8" geneId="TCSYLVIO_001823"/>
        <gene id="746" protId="K4E087" geneId="TCSYLVIO_004898"/>
        <gene id="749" protId="K4DPX4" geneId="TCSYLVIO_008926"/>
        <gene id="751" protId="K4EAL6" geneId="TCSYLVIO_001410"/>
        <gene id="752" protId="K4E7I9" geneId="TCSYLVIO_002404"/>
        <gene id="753" protId="K4DZB5" geneId="TCSYLVIO_005460"/>
        <gene id="754" protId="K4E3X5" geneId="TCSYLVIO_004057"/>
        <gene id="755" protId="K4E5X3" geneId="TCSYLVIO_003001"/>
        <gene id="756" protId="K4DZW7" geneId="TCSYLVIO_005118"/>
        <gene id="757" protId="K4DZS8" geneId="TCSYLVIO_005158"/>
        <gene id="758" protId="K4EAE6" geneId="TCSYLVIO_001703"/>
        <gene id="760" protId="K4DQZ4" geneId="TCSYLVIO_008297"/>
        <gene id="763" protId="K4DV31" geneId="TCSYLVIO_006980"/>
        <gene id="764" protId="K4E452" geneId="TCSYLVIO_003776"/>
        <gene id="766" protId="K4E438" geneId="TCSYLVIO_003784"/>
        <gene id="768" protId="K4E1N2" geneId="TCSYLVIO_004416"/>
        <gene id="769" protId="K4E846" geneId="TCSYLVIO_002520"/>
        <gene id="770" protId="K4E3E5" geneId="TCSYLVIO_003781"/>
        <gene id="771" protId="K4EAL1" geneId="TCSYLVIO_001254"/>
        <gene id="772" protId="K4DSZ8" geneId="TCSYLVIO_007500"/>
        <gene id="773" protId="K4E1G1" geneId="TCSYLVIO_004491"/>
        <gene id="774" protId="K4DUP0" geneId="TCSYLVIO_006982"/>
        <gene id="775" protId="K4E0Z0" geneId="TCSYLVIO_004751"/>
        <gene id="776" protId="K4E6U6" geneId="TCSYLVIO_003002"/>
        <gene id="777" protId="K4EAV9" geneId="TCSYLVIO_001259"/>
        <gene id="781" protId="K4EB25" geneId="TCSYLVIO_001294"/>
        <gene id="785" protId="K4E543" geneId="TCSYLVIO_003144"/>
        <gene id="787" protId="K4DU78" geneId="TCSYLVIO_007308"/>
        <gene id="788" protId="K4DQP9" geneId="TCSYLVIO_008600"/>
        <gene id="791" protId="K4E4M7" geneId="TCSYLVIO_003441"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="T.cruzi" link="http://www.uniprot.org/taxonomy/5693"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
  </scores>
  <groups>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="2">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="2">
      <score id="bit" value="755"/>
      <geneRef id="3">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="4">
        <score id="inparalog" value="0.195"/>
      </geneRef>
      <geneRef id="5">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="3">
      <score id="bit" value="648"/>
      <geneRef id="6">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="7">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="4">
      <score id="bit" value="632"/>
      <geneRef id="8">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="9">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.98"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="5">
      <score id="bit" value="616"/>
      <geneRef id="10">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="11">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="6">
      <score id="bit" value="557"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="13">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="14">
        <score id="inparalog" value="0.056"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="7">
      <score id="bit" value="557"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="16">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="8">
      <score id="bit" value="539"/>
      <geneRef id="17">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="18">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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    </orthologGroup>
    <orthologGroup id="9">
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="20">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.99"/>
      </geneRef>
      <geneRef id="21">
        <score id="inparalog" value="0.124"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="10">
      <score id="bit" value="520"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="23">
        <score id="inparalog" value="0.198"/>
      </geneRef>
      <geneRef id="24">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="11">
      <score id="bit" value="497"/>
      <geneRef id="25">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="26">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.7"/>
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    <orthologGroup id="12">
      <score id="bit" value="460"/>
      <geneRef id="27">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="28">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.97"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="13">
      <score id="bit" value="435"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="30">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.98"/>
      </geneRef>
      <geneRef id="31">
        <score id="inparalog" value="0.402"/>
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    </orthologGroup>
    <orthologGroup id="14">
      <score id="bit" value="428"/>
      <geneRef id="32">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="33">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="15">
      <score id="bit" value="421"/>
      <geneRef id="34">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.99"/>
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      <geneRef id="35">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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    </orthologGroup>
    <orthologGroup id="16">
      <score id="bit" value="410"/>
      <geneRef id="36">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="37">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="17">
      <score id="bit" value="410"/>
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        <score id="bootstrap" value="1"/>
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      <geneRef id="39">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="18">
      <score id="bit" value="408"/>
      <geneRef id="40">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="41">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="19">
      <score id="bit" value="405"/>
      <geneRef id="42">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <geneRef id="43">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="0.99"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="20">
      <score id="bit" value="405"/>
      <geneRef id="44">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="45">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="21">
      <score id="bit" value="404"/>
      <geneRef id="46">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="47">
        <score id="inparalog" value="0.452"/>
      </geneRef>
      <geneRef id="48">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
      </geneRef>
      <geneRef id="49">
        <score id="inparalog" value="0.318"/>
      </geneRef>
    </orthologGroup>
    <orthologGroup id="22">
      <score id="bit" value="404"/>
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