<?xml version="1.0" encoding="utf-8"?>
<orthoXML xmlns="http://orthoXML.org/2011/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="0.3" origin="InParanoid" originVersion="8.0" xsi:schemaLocation="http://orthoXML.org/2011/ http://www.orthoxml.org/0.3/orthoxml.xsd">
  <notes>
    <stats ortholog_groups="2298" inparalogs="6714"/>
    <parameters scoreCutoff="40" confidenceCutoff="0.05" overlapCutoff="0.5" mergingCutoff="0.5" matrix="BLOSUM62"/>
  </notes>
  <species name="Anolis carolinensis " NCBITaxId="28377">
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        <gene id="6452" protId="G1KM80" geneId="LOC100564498"/>
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        <gene id="6518" protId="G1KLN1" geneId="LOC100557417"/>
        <gene id="6519" protId="G1KLQ2" geneId="LOC100560507"/>
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        <gene id="6541" protId="H9GIG8" geneId="SLC46A1"/>
        <gene id="6556" protId="G1KU33" geneId="LOC100562668"/>
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        <gene id="6566" protId="G1KLP8" geneId="LOC100554488"/>
        <gene id="6567" protId="G1KLF4" geneId="LOC100554103"/>
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        <gene id="6662" protId="G1KZF0" geneId="uncharacterized_G1KZF0"/>
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        <gene id="6664" protId="G1KY24" geneId="uncharacterized_G1KY24"/>
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        <gene id="6666" protId="G1KWK2" geneId="uncharacterized_G1KWK2"/>
        <gene id="6667" protId="H9GUS0" geneId="uncharacterized_H9GUS0"/>
        <gene id="6670" protId="H9GE75" geneId="HTRA2"/>
        <gene id="6671" protId="H9GID9" geneId="HTRA3"/>
        <gene id="6672" protId="G1KTV2" geneId="HTRA1"/>
        <gene id="6673" protId="H9GES8" geneId="HTRA4"/>
        <gene id="6676" protId="G1KQR8" geneId="ATP6V0E1"/>
        <gene id="6677" protId="G1KVL8" geneId="ATP6V0E2"/>
        <gene id="6679" protId="G1KT49" geneId="TMEM205"/>
        <gene id="6681" protId="G1KR03" geneId="EMC7"/>
        <gene id="6683" protId="G1KCM1" geneId="TMEM50B"/>
        <gene id="6684" protId="H9GK41" geneId="TMEM50A"/>
        <gene id="6686" protId="H9GA90" geneId="COX4I1"/>
        <gene id="6687" protId="H9GHL4" geneId="COX4I2"/>
        <gene id="6689" protId="G1KCD1" geneId="uncharacterized_G1KCD1"/>
        <gene id="6691" protId="G1KZB1" geneId="LOC100562148"/>
        <gene id="6693" protId="H9GJS8" geneId="TRAPPC2L"/>
        <gene id="6695" protId="H9GJT1" geneId="LOC100556942"/>
        <gene id="6696" protId="H9GF27" geneId="LOC100557138"/>
        <gene id="6700" protId="H9GH04" geneId="LOC100559095"/>
        <gene id="6703" protId="H9GP33" geneId="YRDC"/>
        <gene id="6707" protId="G1KHS6" geneId="NANP"/>
        <gene id="6709" protId="H9GCX6" geneId="MLXIPL"/>
        <gene id="6711" protId="H9G7V2" geneId="UQCRQ"/>
        <gene id="6713" protId="H9G6R7" geneId="LOC100556334"/>
      </genes>
    </database>
    <notes>
      <additionalInformation abbreviation="A.carolinensis" link="http://www.uniprot.org/taxonomy/28377"/>
    </notes>
  </species>
  <species name="Beauveria bassiana " NCBITaxId="655819">
    <database name="UniProt" version="UniProt_Complete_Proteomes_2013_06" protLink="http://www.uniprot.org/uniprot/">
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        <gene id="9" protId="J5JDL3" geneId="BBA_07033"/>
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        <gene id="13" protId="J5K4C4" geneId="BBA_01941"/>
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        <gene id="206" protId="J4KML1" geneId="BBA_06848"/>
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        <gene id="6417" protId="J5JZE6" geneId="BBA_03276"/>
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        <gene id="6690" protId="J5JHR2" geneId="BBA_08007"/>
        <gene id="6692" protId="J5JXD3" geneId="BBA_04234"/>
        <gene id="6694" protId="J5JLR2" geneId="BBA_04736"/>
        <gene id="6697" protId="J5JP22" geneId="BBA_04201"/>
        <gene id="6698" protId="J4KPJ4" geneId="BBA_03339"/>
        <gene id="6699" protId="J4UHQ8" geneId="BBA_08184"/>
        <gene id="6701" protId="J4WG80" geneId="BBA_01970"/>
        <gene id="6702" protId="J5K2Y8" geneId="BBA_02453"/>
        <gene id="6704" protId="J4KKY1" geneId="BBA_09821"/>
        <gene id="6705" protId="J5J200" geneId="BBA_10164"/>
        <gene id="6706" protId="J5JCR9" geneId="BBA_09423"/>
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        <gene id="6710" protId="J5K6F0" geneId="BBA_01626"/>
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    </database>
    <notes>
      <additionalInformation abbreviation="B.bassiana" link="http://www.uniprot.org/taxonomy/655819"/>
    </notes>
  </species>
  <scores>
    <scoreDef id="bit" desc="BLAST score in bits of seed orthologs"/>
    <scoreDef id="inparalog" desc="Inparalog similarity relative to seed ortholog similarity"/>
    <scoreDef id="bootstrap" desc="Reliability of seed orthologs"/>
  </scores>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <score id="bit" value="2931"/>
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      <geneRef id="4">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <score id="bit" value="1920"/>
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        <score id="bootstrap" value="1"/>
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      <geneRef id="6">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <score id="bit" value="1868"/>
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      <geneRef id="8">
        <score id="inparalog" value="0.335"/>
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        <score id="bootstrap" value="1"/>
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      <score id="bit" value="1817"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="0.056"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <score id="bit" value="1350"/>
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        <score id="bootstrap" value="1"/>
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      <geneRef id="22">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <score id="bit" value="1331"/>
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        <score id="bootstrap" value="1"/>
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      <geneRef id="24">
        <score id="inparalog" value="1"/>
        <score id="bootstrap" value="1"/>
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      <score id="bit" value="1279"/>
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        <score id="bootstrap" value="1"/>
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      <geneRef id="28">
        <score id="inparalog" value="1"/>
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